locus-tag class description KAM339_000010 PF00308 Bacterial dnaA protein KAM339_000010 PF08299 Bacterial dnaA protein helix-turn-helix KAM339_000010 PF11638 DnaA N-terminal domain KAM339_000020 PF00712 DNA polymerase III beta subunit, N-terminal domain KAM339_000020 PF02767 DNA polymerase III beta subunit, central domain KAM339_000020 PF02768 DNA polymerase III beta subunit, C-terminal domain KAM339_000030 PF02463 RecF/RecN/SMC N terminal domain KAM339_000040 PF00204 DNA gyrase B KAM339_000040 PF00986 DNA gyrase B subunit, carboxyl terminus KAM339_000040 PF18053 DNA gyrase B subunit insert domain KAM339_000040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_000040 PF01751 Toprim domain KAM339_000050 PF02311 AraC-like ligand binding domain KAM339_000050 PF12833 Helix-turn-helix domain KAM339_000060 PF12706 Beta-lactamase superfamily domain KAM339_000070 PF00011 Hsp20/alpha crystallin family KAM339_000080 PF00011 Hsp20/alpha crystallin family KAM339_000090 PF00155 Aminotransferase class I and II KAM339_000120 PF07690 Major Facilitator Superfamily KAM339_000130 PF00072 Response regulator receiver domain KAM339_000130 PF00486 Transcriptional regulatory protein, C terminal KAM339_000140 PF13493 Domain of unknown function (DUF4118) KAM339_000140 PF13492 GAF domain KAM339_000140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_000140 PF00512 His Kinase A (phospho-acceptor) domain KAM339_000140 PF02702 Osmosensitive K+ channel His kinase sensor domain KAM339_000150 PF02669 K+-transporting ATPase, c chain KAM339_000170 PF03814 Potassium-transporting ATPase A subunit KAM339_000180 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAM339_000180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAM339_000190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_000190 PF00512 His Kinase A (phospho-acceptor) domain KAM339_000190 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAM339_000200 PF00873 AcrB/AcrD/AcrF family KAM339_000210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAM339_000260 PF12146 Serine aminopeptidase, S33 KAM339_000270 PF00132 Bacterial transferase hexapeptide (six repeats) KAM339_000280 PF12105 SpoU, rRNA methylase, C-terminal KAM339_000280 PF00588 SpoU rRNA Methylase family KAM339_000290 PF13291 ACT domain KAM339_000290 PF04607 Region found in RelA / SpoT proteins KAM339_000290 PF02824 TGS domain KAM339_000300 PF01192 RNA polymerase Rpb6 KAM339_000310 PF00625 Guanylate kinase KAM339_000320 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KAM339_000350 PF00892 EamA-like transporter family KAM339_000390 PF03466 LysR substrate binding domain KAM339_000390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_000400 PF00579 tRNA synthetases class I (W and Y) KAM339_000410 PF00582 Universal stress protein family KAM339_000420 PF07055 Enoyl reductase FAD binding domain KAM339_000420 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KAM339_000420 PF12241 Trans-2-enoyl-CoA reductase catalytic region KAM339_000430 PF00990 Diguanylate cyclase, GGDEF domain KAM339_000430 PF05230 MASE2 domain KAM339_000440 PF00210 Ferritin-like domain KAM339_000460 PF07690 Major Facilitator Superfamily KAM339_000470 PF01810 LysE type translocator KAM339_000520 PF15976 CS1-pili formation C-terminal KAM339_000520 PF16967 E-set like domain KAM339_000530 PF18649 EcpB C-terminal domain KAM339_000540 PF16449 Fimbrillin MatB KAM339_000550 PF00072 Response regulator receiver domain KAM339_000550 PF00196 Bacterial regulatory proteins, luxR family KAM339_000560 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAM339_000560 PF00072 Response regulator receiver domain KAM339_000560 PF01627 Hpt domain KAM339_000560 PF00512 His Kinase A (phospho-acceptor) domain KAM339_000560 PF00989 PAS fold KAM339_000560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_000580 PF07694 5TMR of 5TMR-LYT KAM339_000580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_000580 PF06580 Histidine kinase KAM339_000590 PF04397 LytTr DNA-binding domain KAM339_000590 PF00072 Response regulator receiver domain KAM339_000600 PF07690 Major Facilitator Superfamily KAM339_000610 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KAM339_000610 PF02222 ATP-grasp domain KAM339_000620 PF00731 AIR carboxylase KAM339_000640 PF00593 TonB dependent receptor KAM339_000640 PF07715 TonB-dependent Receptor Plug Domain KAM339_000650 PF01177 Asp/Glu/Hydantoin racemase KAM339_000670 PF00899 ThiF family KAM339_000680 PF02657 Fe-S metabolism associated domain KAM339_000690 PF00266 Aminotransferase class-V KAM339_000700 PF13361 UvrD-like helicase C-terminal domain KAM339_000700 PF00580 UvrD/REP helicase N-terminal domain KAM339_000710 PF00990 Diguanylate cyclase, GGDEF domain KAM339_000710 PF03707 Bacterial signalling protein N terminal repeat KAM339_000710 PF00563 EAL domain KAM339_000720 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KAM339_000730 PF00107 Zinc-binding dehydrogenase KAM339_000730 PF08240 Alcohol dehydrogenase GroES-like domain KAM339_000740 PF00155 Aminotransferase class I and II KAM339_000750 PF08360 QacR-like protein, C-terminal region KAM339_000750 PF00440 Bacterial regulatory proteins, tetR family KAM339_000760 PF01370 NAD dependent epimerase/dehydratase family KAM339_000790 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) KAM339_000820 PF03611 PTS system sugar-specific permease component KAM339_000840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KAM339_000850 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KAM339_000850 PF00356 Bacterial regulatory proteins, lacI family KAM339_000890 PF03748 Flagellar basal body-associated protein FliL KAM339_000900 PF04345 Chorismate lyase KAM339_000910 PF01040 UbiA prenyltransferase family KAM339_000920 PF01553 Acyltransferase KAM339_000930 PF01726 LexA DNA binding domain KAM339_000930 PF00717 Peptidase S24-like KAM339_000950 PF02630 SCO1/SenC KAM339_000960 PF01554 MatE KAM339_000970 PF00588 SpoU rRNA Methylase family KAM339_000980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_000980 PF00672 HAMP domain KAM339_000980 PF16527 Two-component sensor protein CpxA, periplasmic domain KAM339_000980 PF00512 His Kinase A (phospho-acceptor) domain KAM339_000990 PF00072 Response regulator receiver domain KAM339_000990 PF00486 Transcriptional regulatory protein, C terminal KAM339_001000 PF01545 Cation efflux family KAM339_001000 PF16916 Dimerisation domain of Zinc Transporter KAM339_001010 PF00132 Bacterial transferase hexapeptide (six repeats) KAM339_001010 PF06426 Serine acetyltransferase, N-terminal KAM339_001030 PF06005 Cell division protein ZapB KAM339_001050 PF01367 5'-3' exonuclease, C-terminal SAM fold KAM339_001050 PF01612 3'-5' exonuclease KAM339_001050 PF00476 DNA polymerase family A KAM339_001050 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KAM339_001060 PF00132 Bacterial transferase hexapeptide (six repeats) KAM339_001070 PF00356 Bacterial regulatory proteins, lacI family KAM339_001080 PF02837 Glycosyl hydrolases family 2, sugar binding domain KAM339_001080 PF00703 Glycosyl hydrolases family 2 KAM339_001080 PF16353 Domain of unknown function(DUF4981) KAM339_001080 PF02929 Beta galactosidase small chain KAM339_001080 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KAM339_001090 PF04074 YhcH/YjgK/YiaL KAM339_001100 PF13520 Amino acid permease KAM339_001110 PF01588 Putative tRNA binding domain KAM339_001120 PF13520 Amino acid permease KAM339_001130 PF13593 SBF-like CPA transporter family (DUF4137) KAM339_001140 PF12867 DinB superfamily KAM339_001140 PF03781 Sulfatase-modifying factor enzyme 1 KAM339_001170 PF00756 Putative esterase KAM339_001180 PF00107 Zinc-binding dehydrogenase KAM339_001180 PF08240 Alcohol dehydrogenase GroES-like domain KAM339_001190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_001190 PF03466 LysR substrate binding domain KAM339_001200 PF02653 Branched-chain amino acid transport system / permease component KAM339_001210 PF02653 Branched-chain amino acid transport system / permease component KAM339_001220 PF00005 ABC transporter KAM339_001230 PF02608 ABC transporter substrate-binding protein PnrA-like KAM339_001240 PF13361 UvrD-like helicase C-terminal domain KAM339_001240 PF00580 UvrD/REP helicase N-terminal domain KAM339_001250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KAM339_001290 PF03466 LysR substrate binding domain KAM339_001290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_001320 PF14001 YdfZ protein KAM339_001360 PF06206 CpeT/CpcT family (DUF1001) KAM339_001370 PF01810 LysE type translocator KAM339_001380 PF12833 Helix-turn-helix domain KAM339_001380 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KAM339_001390 PF00892 EamA-like transporter family KAM339_001410 PF00171 Aldehyde dehydrogenase family KAM339_001430 PF07883 Cupin domain KAM339_001430 PF01381 Helix-turn-helix KAM339_001440 PF00202 Aminotransferase class-III KAM339_001450 PF00171 Aldehyde dehydrogenase family KAM339_001460 PF00117 Glutamine amidotransferase class-I KAM339_001460 PF00958 GMP synthase C terminal domain KAM339_001460 PF02540 NAD synthase KAM339_001470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_001470 PF03466 LysR substrate binding domain KAM339_001480 PF00294 pfkB family carbohydrate kinase KAM339_001490 PF02082 Transcriptional regulator KAM339_001520 PF02646 RmuC family KAM339_001530 PF02386 Cation transport protein KAM339_001540 PF02254 TrkA-N domain KAM339_001540 PF02080 TrkA-C domain KAM339_001550 PF01029 NusB family KAM339_001550 PF01189 16S rRNA methyltransferase RsmB/F KAM339_001560 PF02911 Formyl transferase, C-terminal domain KAM339_001560 PF00551 Formyl transferase KAM339_001570 PF01327 Polypeptide deformylase KAM339_001590 PF17782 DprA winged helix domain KAM339_001590 PF02481 DNA recombination-mediator protein A KAM339_001600 PF04361 Protein of unknown function (DUF494) KAM339_001610 PF01396 Topoisomerase DNA binding C4 zinc finger KAM339_001620 PF01300 Telomere recombination KAM339_001630 PF01218 Coproporphyrinogen III oxidase KAM339_001640 PF01488 Shikimate / quinate 5-dehydrogenase KAM339_001640 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KAM339_001640 PF08501 Shikimate dehydrogenase substrate binding domain KAM339_001650 PF01926 50S ribosome-binding GTPase KAM339_001660 PF00034 Cytochrome c KAM339_001670 PF04220 Der GTPase activator (YihI) KAM339_001680 PF10675 Protein of unknown function (DUF2489) KAM339_001690 PF06969 HemN C-terminal domain KAM339_001690 PF04055 Radical SAM superfamily KAM339_001700 PF00962 Adenosine/AMP deaminase KAM339_001710 PF00158 Sigma-54 interaction domain KAM339_001710 PF00072 Response regulator receiver domain KAM339_001710 PF02954 Bacterial regulatory protein, Fis family KAM339_001720 PF00989 PAS fold KAM339_001720 PF00512 His Kinase A (phospho-acceptor) domain KAM339_001720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_001740 PF03951 Glutamine synthetase, beta-Grasp domain KAM339_001740 PF00120 Glutamine synthetase, catalytic domain KAM339_001750 PF00679 Elongation factor G C-terminus KAM339_001750 PF03144 Elongation factor Tu domain 2 KAM339_001750 PF00009 Elongation factor Tu GTP binding domain KAM339_001760 PF03631 Virulence factor BrkB KAM339_001770 PF02580 D-Tyr-tRNA(Tyr) deacylase KAM339_001800 PF09500 Putative thioesterase (yiiD_Cterm) KAM339_001800 PF00583 Acetyltransferase (GNAT) family KAM339_001820 PF17191 RecG wedge domain KAM339_001820 PF00270 DEAD/DEAH box helicase KAM339_001820 PF00271 Helicase conserved C-terminal domain KAM339_001830 PF13091 PLD-like domain KAM339_001840 PF02447 GntP family permease KAM339_001850 PF01202 Shikimate kinase KAM339_001860 PF00920 Dehydratase family KAM339_001870 PF01081 KDPG and KHG aldolase KAM339_001900 PF00356 Bacterial regulatory proteins, lacI family KAM339_001900 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KAM339_001920 PF01551 Peptidase family M23 KAM339_001930 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KAM339_001930 PF01676 Metalloenzyme superfamily KAM339_001940 PF00581 Rhodanese-like domain KAM339_001950 PF02556 Preprotein translocase subunit SecB KAM339_001960 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KAM339_001960 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KAM339_001970 PF01106 NifU-like domain KAM339_001970 PF01521 Iron-sulphur cluster biosynthesis KAM339_001980 PF00156 Phosphoribosyl transferase domain KAM339_001990 PF00561 alpha/beta hydrolase fold KAM339_002020 PF17674 HHH domain KAM339_002020 PF00575 S1 RNA binding domain KAM339_002020 PF09371 Tex-like protein N-terminal domain KAM339_002020 PF16921 Tex protein YqgF-like domain KAM339_002030 PF01272 Transcription elongation factor, GreA/GreB, C-term KAM339_002030 PF03449 Transcription elongation factor, N-terminal KAM339_002040 PF00072 Response regulator receiver domain KAM339_002040 PF00486 Transcriptional regulatory protein, C terminal KAM339_002050 PF00512 His Kinase A (phospho-acceptor) domain KAM339_002050 PF00672 HAMP domain KAM339_002050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_002070 PF00338 Ribosomal protein S10p/S20e KAM339_002080 PF00297 Ribosomal protein L3 KAM339_002090 PF00573 Ribosomal protein L4/L1 family KAM339_002100 PF00276 Ribosomal protein L23 KAM339_002110 PF03947 Ribosomal Proteins L2, C-terminal domain KAM339_002110 PF00181 Ribosomal Proteins L2, RNA binding domain KAM339_002120 PF00203 Ribosomal protein S19 KAM339_002130 PF00237 Ribosomal protein L22p/L17e KAM339_002140 PF00189 Ribosomal protein S3, C-terminal domain KAM339_002140 PF07650 KH domain KAM339_002150 PF00252 Ribosomal protein L16p/L10e KAM339_002160 PF00831 Ribosomal L29 protein KAM339_002170 PF00366 Ribosomal protein S17 KAM339_002180 PF00238 Ribosomal protein L14p/L23e KAM339_002190 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KAM339_002190 PF00467 KOW motif KAM339_002200 PF00281 Ribosomal protein L5 KAM339_002200 PF00673 ribosomal L5P family C-terminus KAM339_002210 PF00253 Ribosomal protein S14p/S29e KAM339_002220 PF00410 Ribosomal protein S8 KAM339_002230 PF00347 Ribosomal protein L6 KAM339_002240 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KAM339_002250 PF00333 Ribosomal protein S5, N-terminal domain KAM339_002250 PF03719 Ribosomal protein S5, C-terminal domain KAM339_002260 PF00327 Ribosomal protein L30p/L7e KAM339_002270 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KAM339_002280 PF00344 SecY translocase KAM339_002290 PF00416 Ribosomal protein S13/S18 KAM339_002300 PF00411 Ribosomal protein S11 KAM339_002310 PF01479 S4 domain KAM339_002310 PF00163 Ribosomal protein S4/S9 N-terminal domain KAM339_002320 PF01000 RNA polymerase Rpb3/RpoA insert domain KAM339_002320 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KAM339_002320 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KAM339_002330 PF01196 Ribosomal protein L17 KAM339_002350 PF01527 Transposase KAM339_002360 PF00665 Integrase core domain KAM339_002360 PF13936 Helix-turn-helix domain KAM339_002370 PF00665 Integrase core domain KAM339_002370 PF13276 HTH-like domain KAM339_002370 PF13333 Integrase core domain KAM339_002410 PF02254 TrkA-N domain KAM339_002410 PF00999 Sodium/hydrogen exchanger family KAM339_002420 PF02525 Flavodoxin-like fold KAM339_002430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_002430 PF03466 LysR substrate binding domain KAM339_002440 PF00106 short chain dehydrogenase KAM339_002470 PF00326 Prolyl oligopeptidase family KAM339_002470 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KAM339_002480 PF16868 NMT1-like family KAM339_002510 PF07947 YhhN family KAM339_002520 PF07690 Major Facilitator Superfamily KAM339_002530 PF13533 Biotin-lipoyl like KAM339_002540 PF03466 LysR substrate binding domain KAM339_002540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_002560 PF00375 Sodium:dicarboxylate symporter family KAM339_002570 PF10678 Protein of unknown function (DUF2492) KAM339_002580 PF01914 MarC family integral membrane protein KAM339_002590 PF03466 LysR substrate binding domain KAM339_002590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_002600 PF02416 mttA/Hcf106 family KAM339_002620 PF01464 Transglycosylase SLT domain KAM339_002620 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAM339_002640 PF13091 PLD-like domain KAM339_002670 PF00440 Bacterial regulatory proteins, tetR family KAM339_002680 PF07226 Protein of unknown function (DUF1422) KAM339_002720 PF02881 SRP54-type protein, helical bundle domain KAM339_002720 PF00448 SRP54-type protein, GTPase domain KAM339_002730 PF00005 ABC transporter KAM339_002740 PF18075 FtsX extracellular domain KAM339_002750 PF04542 Sigma-70 region 2 KAM339_002750 PF00140 Sigma-70 factor, region 1.2 KAM339_002750 PF04545 Sigma-70, region 4 KAM339_002760 PF00484 Carbonic anhydrase KAM339_002770 PF07702 UTRA domain KAM339_002770 PF00392 Bacterial regulatory proteins, gntR family KAM339_002780 PF01979 Amidohydrolase family KAM339_002790 PF00491 Arginase family KAM339_002800 PF17391 Urocanase N-terminal domain KAM339_002800 PF17392 Urocanase C-terminal domain KAM339_002800 PF01175 Urocanase Rossmann-like domain KAM339_002810 PF00221 Aromatic amino acid lyase KAM339_002820 PF01699 Sodium/calcium exchanger protein KAM339_002830 PF12792 CSS motif domain associated with EAL KAM339_002830 PF00563 EAL domain KAM339_002910 PF00263 Bacterial type II and III secretion system protein KAM339_002910 PF03958 Bacterial type II/III secretion system short domain KAM339_002940 PF00437 Type II/IV secretion system protein KAM339_002940 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KAM339_002950 PF00482 Type II secretion system (T2SS), protein F KAM339_002970 PF07963 Prokaryotic N-terminal methylation motif KAM339_002980 PF07963 Prokaryotic N-terminal methylation motif KAM339_002980 PF08334 Type II secretion system (T2SS), protein G KAM339_002990 PF07963 Prokaryotic N-terminal methylation motif KAM339_002990 PF00114 Pilin (bacterial filament) KAM339_003050 PF04085 rod shape-determining protein MreC KAM339_003060 PF04093 rod shape-determining protein MreD KAM339_003070 PF02545 Maf-like protein KAM339_003080 PF10150 Ribonuclease E/G family KAM339_003080 PF00575 S1 RNA binding domain KAM339_003090 PF13502 AsmA-like C-terminal region KAM339_003090 PF13116 Protein of unknown function KAM339_003100 PF00795 Carbon-nitrogen hydrolase KAM339_003110 PF01523 Putative modulator of DNA gyrase KAM339_003130 PF01914 MarC family integral membrane protein KAM339_003140 PF07690 Major Facilitator Superfamily KAM339_003160 PF04228 Putative neutral zinc metallopeptidase KAM339_003210 PF00999 Sodium/hydrogen exchanger family KAM339_003220 PF02310 B12 binding domain KAM339_003220 PF02607 B12 binding domain KAM339_003220 PF02965 Vitamin B12 dependent methionine synthase, activation domain KAM339_003220 PF00809 Pterin binding enzyme KAM339_003220 PF02574 Homocysteine S-methyltransferase KAM339_003240 PF08443 RimK-like ATP-grasp domain KAM339_003240 PF18030 RimK PreATP-grasp domain KAM339_003250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_003260 PF00072 Response regulator receiver domain KAM339_003260 PF00486 Transcriptional regulatory protein, C terminal KAM339_003290 PF13667 ThiC-associated domain KAM339_003290 PF01964 Radical SAM ThiC family KAM339_003300 PF02581 Thiamine monophosphate synthase KAM339_003310 PF00899 ThiF family KAM339_003330 PF05690 Thiazole biosynthesis protein ThiG KAM339_003340 PF06968 Biotin and Thiamin Synthesis associated domain KAM339_003340 PF04055 Radical SAM superfamily KAM339_003400 PF00132 Bacterial transferase hexapeptide (six repeats) KAM339_003410 PF13036 Peptidoglycan-synthase activator LpoB KAM339_003420 PF00990 Diguanylate cyclase, GGDEF domain KAM339_003430 PF06055 Exopolysaccharide synthesis, ExoD KAM339_003450 PF08803 Putative mono-oxygenase ydhR KAM339_003460 PF01638 HxlR-like helix-turn-helix KAM339_003510 PF00593 TonB dependent receptor KAM339_003510 PF07715 TonB-dependent Receptor Plug Domain KAM339_003530 PF08241 Methyltransferase domain KAM339_003550 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KAM339_003560 PF03692 Putative zinc- or iron-chelating domain KAM339_003570 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KAM339_003580 PF01722 BolA-like protein KAM339_003600 PF05494 MlaC protein KAM339_003610 PF02470 MlaD protein KAM339_003620 PF02405 Permease MlaE KAM339_003630 PF00005 ABC transporter KAM339_003640 PF01380 SIS domain KAM339_003640 PF00571 CBS domain KAM339_003670 PF03968 OstA-like protein KAM339_003680 PF12399 Branched-chain amino acid ATP-binding cassette transporter KAM339_003680 PF00005 ABC transporter KAM339_003690 PF00309 Sigma-54 factor, Activator interacting domain (AID) KAM339_003690 PF04963 Sigma-54 factor, core binding domain KAM339_003690 PF04552 Sigma-54, DNA binding domain KAM339_003700 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KAM339_003710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KAM339_003720 PF03668 P-loop ATPase protein family KAM339_003730 PF00381 PTS HPr component phosphorylation site KAM339_003740 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KAM339_003740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KAM339_003740 PF02378 Phosphotransferase system, EIIC KAM339_003750 PF07071 KDGP aldolase KAM339_003760 PF03841 L-seryl-tRNA selenium transferase KAM339_003770 PF01979 Amidohydrolase family KAM339_003830 PF13180 PDZ domain KAM339_003840 PF00595 PDZ domain KAM339_003840 PF13180 PDZ domain KAM339_003860 PF03969 AFG1-like ATPase KAM339_003870 PF00572 Ribosomal protein L13 KAM339_003880 PF00380 Ribosomal protein S9/S16 KAM339_003890 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal KAM339_003890 PF00355 Rieske [2Fe-2S] domain KAM339_003900 PF00032 Cytochrome b(C-terminal)/b6/petD KAM339_003900 PF00033 Cytochrome b/b6/petB KAM339_003910 PF02167 Cytochrome C1 family KAM339_003920 PF00043 Glutathione S-transferase, C-terminal domain KAM339_003920 PF02798 Glutathione S-transferase, N-terminal domain KAM339_003930 PF04386 Stringent starvation protein B KAM339_003940 PF04972 BON domain KAM339_003950 PF13580 SIS domain KAM339_003960 PF02021 Uncharacterised protein family UPF0102 KAM339_003970 PF04348 LppC putative lipoprotein KAM339_003980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAM339_003990 PF02381 MraZ protein, putative antitoxin-like KAM339_004000 PF01795 MraW methylase family KAM339_004010 PF04999 Cell division protein FtsL KAM339_004020 PF03717 Penicillin-binding Protein dimerisation domain KAM339_004020 PF00905 Penicillin binding protein transpeptidase domain KAM339_004030 PF01225 Mur ligase family, catalytic domain KAM339_004030 PF02875 Mur ligase family, glutamate ligase domain KAM339_004030 PF08245 Mur ligase middle domain KAM339_004040 PF01225 Mur ligase family, catalytic domain KAM339_004040 PF02875 Mur ligase family, glutamate ligase domain KAM339_004040 PF08245 Mur ligase middle domain KAM339_004050 PF00953 Glycosyl transferase family 4 KAM339_004050 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KAM339_004060 PF02875 Mur ligase family, glutamate ligase domain KAM339_004060 PF08245 Mur ligase middle domain KAM339_004070 PF01098 Cell cycle protein KAM339_004080 PF04101 Glycosyltransferase family 28 C-terminal domain KAM339_004080 PF03033 Glycosyltransferase family 28 N-terminal domain KAM339_004090 PF01225 Mur ligase family, catalytic domain KAM339_004090 PF02875 Mur ligase family, glutamate ligase domain KAM339_004090 PF08245 Mur ligase middle domain KAM339_004100 PF03799 Cell division protein FtsQ KAM339_004100 PF08478 POTRA domain, FtsQ-type KAM339_004110 PF02491 SHS2 domain inserted in FTSA KAM339_004120 PF12327 FtsZ family, C-terminal domain KAM339_004120 PF00091 Tubulin/FtsZ family, GTPase domain KAM339_004130 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KAM339_004150 PF07516 SecA Wing and Scaffold domain KAM339_004150 PF02810 SEC-C motif KAM339_004150 PF07517 SecA DEAD-like domain KAM339_004150 PF01043 SecA preprotein cross-linking domain KAM339_004170 PF00293 NUDIX domain KAM339_004180 PF03884 DNA gyrase inhibitor YacG KAM339_004190 PF07072 Cell division protein KAM339_004200 PF01121 Dephospho-CoA kinase KAM339_004210 PF01478 Type IV leader peptidase family KAM339_004210 PF06750 Bacterial Peptidase A24 N-terminal domain KAM339_004220 PF00482 Type II secretion system (T2SS), protein F KAM339_004230 PF00437 Type II/IV secretion system protein KAM339_004230 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KAM339_004240 PF07963 Prokaryotic N-terminal methylation motif KAM339_004250 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KAM339_004250 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KAM339_004270 PF01510 N-acetylmuramoyl-L-alanine amidase KAM339_004280 PF07729 FCD domain KAM339_004280 PF00392 Bacterial regulatory proteins, gntR family KAM339_004290 PF17831 Pyruvate dehydrogenase E1 component middle domain KAM339_004290 PF00456 Transketolase, thiamine diphosphate binding domain KAM339_004300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KAM339_004300 PF02817 e3 binding domain KAM339_004300 PF00364 Biotin-requiring enzyme KAM339_004310 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAM339_004310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAM339_004330 PF12729 Four helix bundle sensory module for signal transduction KAM339_004330 PF00672 HAMP domain KAM339_004330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_004340 PF12729 Four helix bundle sensory module for signal transduction KAM339_004340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_004340 PF00672 HAMP domain KAM339_004350 PF01734 Patatin-like phospholipase KAM339_004360 PF00330 Aconitase family (aconitate hydratase) KAM339_004360 PF06434 Aconitate hydratase 2 N-terminus KAM339_004360 PF11791 Aconitate B N-terminal domain KAM339_004370 PF00563 EAL domain KAM339_004370 PF12792 CSS motif domain associated with EAL KAM339_004380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_004380 PF03466 LysR substrate binding domain KAM339_004390 PF01810 LysE type translocator KAM339_004400 PF04030 D-arabinono-1,4-lactone oxidase KAM339_004400 PF01565 FAD binding domain KAM339_004410 PF02492 CobW/HypB/UreG, nucleotide-binding domain KAM339_004410 PF07683 Cobalamin synthesis protein cobW C-terminal domain KAM339_004420 PF07690 Major Facilitator Superfamily KAM339_004440 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KAM339_004450 PF02152 Dihydroneopterin aldolase KAM339_004460 PF02660 Glycerol-3-phosphate acyltransferase KAM339_004500 PF02028 BCCT, betaine/carnitine/choline family transporter KAM339_004510 PF01624 MutS domain I KAM339_004510 PF05192 MutS domain III KAM339_004510 PF05190 MutS family domain IV KAM339_004510 PF00488 MutS domain V KAM339_004510 PF05188 MutS domain II KAM339_004530 PF02464 Competence-damaged protein KAM339_004540 PF00154 recA bacterial DNA recombination protein KAM339_004550 PF02631 RecX family KAM339_004560 PF02272 DHHA1 domain KAM339_004560 PF01411 tRNA synthetases class II (A) KAM339_004560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KAM339_004570 PF00696 Amino acid kinase family KAM339_004570 PF01842 ACT domain KAM339_004570 PF13840 ACT domain KAM339_004580 PF02599 Global regulator protein family KAM339_004590 PF00768 D-alanyl-D-alanine carboxypeptidase KAM339_004600 PF09335 SNARE associated Golgi protein KAM339_004610 PF01595 Cyclin M transmembrane N-terminal domain KAM339_004610 PF00571 CBS domain KAM339_004610 PF03471 Transporter associated domain KAM339_004620 PF10458 Valyl tRNA synthetase tRNA binding arm KAM339_004620 PF00133 tRNA synthetases class I (I, L, M and V) KAM339_004620 PF08264 Anticodon-binding domain of tRNA KAM339_004630 PF04364 DNA polymerase III chi subunit, HolC KAM339_004640 PF00883 Cytosol aminopeptidase family, catalytic domain KAM339_004640 PF02789 Cytosol aminopeptidase family, N-terminal domain KAM339_004650 PF03739 Lipopolysaccharide export system permease LptF/LptG KAM339_004660 PF03739 Lipopolysaccharide export system permease LptF/LptG KAM339_004700 PF09669 Phage regulatory protein Rha (Phage_pRha) KAM339_004700 PF10549 ORF11CD3 domain KAM339_004760 PF07484 Phage Tail Collar Domain KAM339_005130 PF01381 Helix-turn-helix KAM339_005180 PF02899 Phage integrase, N-terminal SAM-like domain KAM339_005180 PF00589 Phage integrase family KAM339_005200 PF00909 Ammonium Transporter Family KAM339_005210 PF05958 tRNA (Uracil-5-)-methyltransferase KAM339_005210 PF01938 TRAM domain KAM339_005240 PF07963 Prokaryotic N-terminal methylation motif KAM339_005250 PF01026 TatD related DNase KAM339_005260 PF01773 Na+ dependent nucleoside transporter N-terminus KAM339_005260 PF07662 Na+ dependent nucleoside transporter C-terminus KAM339_005260 PF07670 Nucleoside recognition KAM339_005280 PF01791 DeoC/LacD family aldolase KAM339_005290 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KAM339_005290 PF00591 Glycosyl transferase family, a/b domain KAM339_005290 PF02885 Glycosyl transferase family, helical bundle domain KAM339_005300 PF01676 Metalloenzyme superfamily KAM339_005310 PF01048 Phosphorylase superfamily KAM339_005320 PF16998 17 kDa outer membrane surface antigen KAM339_005320 PF05433 Glycine zipper 2TM domain KAM339_005330 PF13426 PAS domain KAM339_005330 PF08447 PAS fold KAM339_005330 PF05231 MASE1 KAM339_005330 PF00990 Diguanylate cyclase, GGDEF domain KAM339_005330 PF00563 EAL domain KAM339_005330 PF08448 PAS fold KAM339_005350 PF18429 Domain of unknown function (DUF5609) KAM339_005380 PF18073 Rubredoxin metal binding domain KAM339_005390 PF07238 PilZ domain KAM339_005400 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ KAM339_005410 PF00216 Bacterial DNA-binding protein KAM339_005440 PF01207 Dihydrouridine synthase (Dus) KAM339_005450 PF01475 Ferric uptake regulator family KAM339_005480 PF05525 Branched-chain amino acid transport protein KAM339_005490 PF05175 Methyltransferase small domain KAM339_005500 PF00271 Helicase conserved C-terminal domain KAM339_005500 PF00270 DEAD/DEAH box helicase KAM339_005510 PF03883 Peroxide stress protein YaaA KAM339_005520 PF00437 Type II/IV secretion system protein KAM339_005530 PF00437 Type II/IV secretion system protein KAM339_005540 PF01168 Alanine racemase, N-terminal domain KAM339_005550 PF14748 Pyrroline-5-carboxylate reductase dimerisation KAM339_005550 PF03807 NADP oxidoreductase coenzyme F420-dependent KAM339_005560 PF02325 YGGT family KAM339_005570 PF02594 Uncharacterised ACR, YggU family COG1872 KAM339_005610 PF06062 Uncharacterised protein family (UPF0231) KAM339_005620 PF13556 PucR C-terminal helix-turn-helix domain KAM339_005620 PF17853 GGDEF-like domain KAM339_005620 PF05651 Putative sugar diacid recognition KAM339_005630 PF02447 GntP family permease KAM339_005640 PF02595 Glycerate kinase family KAM339_005660 PF00255 Glutathione peroxidase KAM339_005670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_005670 PF03466 LysR substrate binding domain KAM339_005680 PF07670 Nucleoside recognition KAM339_005680 PF07662 Na+ dependent nucleoside transporter C-terminus KAM339_005680 PF01773 Na+ dependent nucleoside transporter N-terminus KAM339_005690 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KAM339_005690 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAM339_005700 PF00472 RF-1 domain KAM339_005710 PF00543 Nitrogen regulatory protein P-II KAM339_005740 PF00005 ABC transporter KAM339_005740 PF08402 TOBE domain KAM339_005750 PF04261 Dyp-type peroxidase family KAM339_005760 PF02863 Arginine repressor, C-terminal domain KAM339_005760 PF01316 Arginine repressor, DNA binding domain KAM339_005770 PF00005 ABC transporter KAM339_005780 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAM339_005790 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_005800 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_005810 PF00056 lactate/malate dehydrogenase, NAD binding domain KAM339_005810 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KAM339_005830 PF08238 Sel1 repeat KAM339_005840 PF00970 Oxidoreductase FAD-binding domain KAM339_005840 PF00175 Oxidoreductase NAD-binding domain KAM339_005840 PF00042 Globin KAM339_005850 PF02082 Transcriptional regulator KAM339_005860 PF03471 Transporter associated domain KAM339_005860 PF00571 CBS domain KAM339_005860 PF01595 Cyclin M transmembrane N-terminal domain KAM339_005870 PF01578 Cytochrome C assembly protein KAM339_005880 PF00448 SRP54-type protein, GTPase domain KAM339_005880 PF02881 SRP54-type protein, helical bundle domain KAM339_005880 PF02978 Signal peptide binding domain KAM339_005890 PF00886 Ribosomal protein S16 KAM339_005900 PF01782 RimM N-terminal domain KAM339_005900 PF05239 PRC-barrel domain KAM339_005910 PF01746 tRNA (Guanine-1)-methyltransferase KAM339_005920 PF01245 Ribosomal protein L19 KAM339_005940 PF02976 DNA mismatch repair enzyme MutH KAM339_005950 PF00293 NUDIX domain KAM339_005960 PF02896 PEP-utilising enzyme, TIM barrel domain KAM339_005960 PF05524 PEP-utilising enzyme, N-terminal KAM339_005960 PF01590 GAF domain KAM339_005960 PF00391 PEP-utilising enzyme, mobile domain KAM339_005970 PF01790 Prolipoprotein diacylglyceryl transferase KAM339_005980 PF00303 Thymidylate synthase KAM339_005990 PF06965 Na+/H+ antiporter 1 KAM339_006280 PF00717 Peptidase S24-like KAM339_006290 PF13438 Domain of unknown function (DUF4113) KAM339_006290 PF11798 IMS family HHH motif KAM339_006290 PF11799 impB/mucB/samB family C-terminal domain KAM339_006290 PF00817 impB/mucB/samB family KAM339_006350 PF00145 C-5 cytosine-specific DNA methylase KAM339_006440 PF06892 Phage regulatory protein CII (CP76) KAM339_006500 PF00589 Phage integrase family KAM339_006500 PF02899 Phage integrase, N-terminal SAM-like domain KAM339_006510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_006510 PF03466 LysR substrate binding domain KAM339_006520 PF01022 Bacterial regulatory protein, arsR family KAM339_006530 PF01649 Ribosomal protein S20 KAM339_006540 PF03023 Lipid II flippase MurJ KAM339_006550 PF06574 FAD synthetase KAM339_006550 PF01687 Riboflavin kinase KAM339_006560 PF06827 Zinc finger found in FPG and IleRS KAM339_006560 PF08264 Anticodon-binding domain of tRNA KAM339_006560 PF00133 tRNA synthetases class I (I, L, M and V) KAM339_006570 PF01252 Signal peptidase (SPase) II KAM339_006580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAM339_006590 PF02401 LytB protein KAM339_006600 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor KAM339_006600 PF07963 Prokaryotic N-terminal methylation motif KAM339_006670 PF00795 Carbon-nitrogen hydrolase KAM339_006670 PF02540 NAD synthase KAM339_006680 PF00543 Nitrogen regulatory protein P-II KAM339_006700 PF02664 S-Ribosylhomocysteinase (LuxS) KAM339_006710 PF00990 Diguanylate cyclase, GGDEF domain KAM339_006720 PF08206 Ribonuclease B OB domain KAM339_006720 PF08461 Ribonuclease R winged-helix domain KAM339_006720 PF00575 S1 RNA binding domain KAM339_006720 PF17876 Cold shock domain KAM339_006720 PF00773 RNB domain KAM339_006730 PF08032 RNA 2'-O ribose methyltransferase substrate binding KAM339_006730 PF00588 SpoU rRNA Methylase family KAM339_006750 PF13673 Acetyltransferase (GNAT) domain KAM339_006760 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KAM339_006760 PF02272 DHHA1 domain KAM339_006760 PF01411 tRNA synthetases class II (A) KAM339_006770 PF01566 Natural resistance-associated macrophage protein KAM339_006780 PF01250 Ribosomal protein S6 KAM339_006790 PF01084 Ribosomal protein S18 KAM339_006800 PF03948 Ribosomal protein L9, C-terminal domain KAM339_006800 PF01281 Ribosomal protein L9, N-terminal domain KAM339_006810 PF00970 Oxidoreductase FAD-binding domain KAM339_006810 PF00175 Oxidoreductase NAD-binding domain KAM339_006850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAM339_006870 PF14765 Polyketide synthase dehydratase KAM339_006870 PF08659 KR domain KAM339_006870 PF00550 Phosphopantetheine attachment site KAM339_006870 PF02801 Beta-ketoacyl synthase, C-terminal domain KAM339_006870 PF00698 Acyl transferase domain KAM339_006870 PF08240 Alcohol dehydrogenase GroES-like domain KAM339_006870 PF08990 Erythronolide synthase docking KAM339_006870 PF00109 Beta-ketoacyl synthase, N-terminal domain KAM339_006870 PF16197 Ketoacyl-synthetase C-terminal extension KAM339_006880 PF09335 SNARE associated Golgi protein KAM339_006890 PF05193 Peptidase M16 inactive domain KAM339_006890 PF00675 Insulinase (Peptidase family M16) KAM339_006900 PF04262 Glutamate-cysteine ligase KAM339_006910 PF03605 Anaerobic c4-dicarboxylate membrane transporter KAM339_006920 PF10415 Fumarase C C-terminus KAM339_006920 PF00206 Lyase KAM339_006930 PF04186 FxsA cytoplasmic membrane protein KAM339_006940 PF01554 MatE KAM339_006950 PF00166 Chaperonin 10 Kd subunit KAM339_006960 PF00118 TCP-1/cpn60 chaperonin family KAM339_006980 PF03707 Bacterial signalling protein N terminal repeat KAM339_006980 PF00990 Diguanylate cyclase, GGDEF domain KAM339_006980 PF00563 EAL domain KAM339_007010 PF00849 RNA pseudouridylate synthase KAM339_007020 PF00271 Helicase conserved C-terminal domain KAM339_007020 PF12137 RNA polymerase recycling family C-terminal KAM339_007020 PF00176 SNF2 family N-terminal domain KAM339_007020 PF18339 RapA N-terminal Tudor like domain 1 KAM339_007020 PF18337 RapA N-terminal Tudor like domain KAM339_007050 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_007060 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_007070 PF00005 ABC transporter KAM339_007070 PF12857 TOBE-like domain KAM339_007080 PF03466 LysR substrate binding domain KAM339_007080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_007090 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KAM339_007090 PF18416 N-acetylglucosamine binding protein domain 2 KAM339_007100 PF17200 Single Cache domain 2 KAM339_007100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_007100 PF00672 HAMP domain KAM339_007150 PF11230 Protein of unknown function (DUF3029) KAM339_007160 PF04055 Radical SAM superfamily KAM339_007180 PF03466 LysR substrate binding domain KAM339_007180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_007190 PF00155 Aminotransferase class I and II KAM339_007200 PF11658 Cellulose biosynthesis protein BcsG KAM339_007220 PF06564 Cellulose biosynthesis protein BcsQ KAM339_007230 PF00535 Glycosyl transferase family 2 KAM339_007230 PF07238 PilZ domain KAM339_007230 PF03552 Cellulose synthase KAM339_007250 PF00535 Glycosyl transferase family 2 KAM339_007250 PF07238 PilZ domain KAM339_007250 PF03552 Cellulose synthase KAM339_007260 PF03170 Bacterial cellulose synthase subunit KAM339_007270 PF01270 Glycosyl hydrolases family 8 KAM339_007280 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) KAM339_007290 PF02583 Metal-sensitive transcriptional repressor KAM339_007320 PF11852 Domain of unknown function (DUF3372) KAM339_007320 PF18494 Pullulanase Ins domain KAM339_007320 PF17967 Pullulanase N2 domain KAM339_007320 PF03714 Bacterial pullanase-associated domain KAM339_007320 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KAM339_007340 PF03743 Bacterial conjugation TrbI-like protein KAM339_007350 PF03524 Conjugal transfer protein KAM339_007370 PF04610 TrbL/VirB6 plasmid conjugal transfer protein KAM339_007400 PF03135 CagE, TrbE, VirB family, component of type IV transporter system KAM339_007420 PF04956 TrbC/VIRB2 family KAM339_007430 PF00437 Type II/IV secretion system protein KAM339_007450 PF02534 Type IV secretory system Conjugative DNA transfer KAM339_007470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_007470 PF03466 LysR substrate binding domain KAM339_007490 PF00440 Bacterial regulatory proteins, tetR family KAM339_007500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAM339_007510 PF00873 AcrB/AcrD/AcrF family KAM339_007520 PF00893 Small Multidrug Resistance protein KAM339_007560 PF10502 Signal peptidase, peptidase S26 KAM339_007590 PF13614 AAA domain KAM339_007650 PF05284 Protein of unknown function (DUF736) KAM339_007670 PF02195 ParB-like nuclease domain KAM339_007680 PF06067 Domain of unknown function (DUF932) KAM339_007710 PF04002 RadC-like JAB domain KAM339_007810 PF00145 C-5 cytosine-specific DNA methylase KAM339_007810 PF01381 Helix-turn-helix KAM339_007840 PF00403 Heavy-metal-associated domain KAM339_007850 PF08534 Redoxin KAM339_007860 PF00270 DEAD/DEAH box helicase KAM339_007860 PF00271 Helicase conserved C-terminal domain KAM339_007870 PF12729 Four helix bundle sensory module for signal transduction KAM339_007870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_007870 PF00672 HAMP domain KAM339_007890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAM339_007910 PF10952 Protein of unknown function (DUF2753) KAM339_007920 PF00378 Enoyl-CoA hydratase/isomerase KAM339_007950 PF00106 short chain dehydrogenase KAM339_007960 PF00929 Exonuclease KAM339_007970 PF03129 Anticodon binding domain KAM339_007970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAM339_007970 PF04073 Aminoacyl-tRNA editing domain KAM339_007980 PF00672 HAMP domain KAM339_007980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_007990 PF07499 RuvA, C-terminal domain KAM339_007990 PF01330 RuvA N terminal domain KAM339_008000 PF05496 Holliday junction DNA helicase RuvB P-loop domain KAM339_008000 PF05491 RuvB C-terminal winged helix domain KAM339_008000 PF17864 RuvB AAA lid domain KAM339_008010 PF01654 Cytochrome bd terminal oxidase subunit I KAM339_008020 PF02322 Cytochrome bd terminal oxidase subunit II KAM339_008030 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) KAM339_008040 PF03061 Thioesterase superfamily KAM339_008050 PF01618 MotA/TolQ/ExbB proton channel family KAM339_008060 PF02472 Biopolymer transport protein ExbD/TolR KAM339_008080 PF07676 WD40-like Beta Propeller Repeat KAM339_008080 PF04052 TolB amino-terminal domain KAM339_008090 PF00691 OmpA family KAM339_008100 PF16331 TolA binding protein trimerisation KAM339_008100 PF13174 Tetratricopeptide repeat KAM339_008110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_008110 PF00672 HAMP domain KAM339_008120 PF02445 Quinolinate synthetase A protein KAM339_008130 PF01263 Aldose 1-epimerase KAM339_008140 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KAM339_008140 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KAM339_008150 PF02446 4-alpha-glucanotransferase KAM339_008160 PF00128 Alpha amylase, catalytic domain KAM339_008160 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KAM339_008160 PF02806 Alpha amylase, C-terminal all-beta domain KAM339_008170 PF00128 Alpha amylase, catalytic domain KAM339_008170 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KAM339_008180 PF01641 SelR domain KAM339_008210 PF00293 NUDIX domain KAM339_008220 PF16884 N-terminal domain of oxidoreductase KAM339_008220 PF00107 Zinc-binding dehydrogenase KAM339_008230 PF01047 MarR family KAM339_008260 PF01037 Lrp/AsnC ligand binding domain KAM339_008280 PF07690 Major Facilitator Superfamily KAM339_008320 PF00209 Sodium:neurotransmitter symporter family KAM339_008330 PF00209 Sodium:neurotransmitter symporter family KAM339_008360 PF00155 Aminotransferase class I and II KAM339_008360 PF00392 Bacterial regulatory proteins, gntR family KAM339_008390 PF01177 Asp/Glu/Hydantoin racemase KAM339_008410 PF00501 AMP-binding enzyme KAM339_008430 PF00583 Acetyltransferase (GNAT) family KAM339_008450 PF12592 Protein of unknown function (DUF3763) KAM339_008450 PF17868 AAA lid domain KAM339_008450 PF07728 AAA domain (dynein-related subfamily) KAM339_008460 PF05762 VWA domain containing CoxE-like protein KAM339_008470 PF00990 Diguanylate cyclase, GGDEF domain KAM339_008470 PF00563 EAL domain KAM339_008470 PF08448 PAS fold KAM339_008480 PF00990 Diguanylate cyclase, GGDEF domain KAM339_008480 PF00072 Response regulator receiver domain KAM339_008490 PF00009 Elongation factor Tu GTP binding domain KAM339_008490 PF03144 Elongation factor Tu domain 2 KAM339_008490 PF16658 Class II release factor RF3, C-terminal domain KAM339_008510 PF01758 Sodium Bile acid symporter family KAM339_008520 PF00583 Acetyltransferase (GNAT) family KAM339_008530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAM339_008550 PF03466 LysR substrate binding domain KAM339_008550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_008560 PF04371 Porphyromonas-type peptidyl-arginine deiminase KAM339_008570 PF01425 Amidase KAM339_008600 PF00753 Metallo-beta-lactamase superfamily KAM339_008640 PF12833 Helix-turn-helix domain KAM339_008660 PF00111 2Fe-2S iron-sulfur cluster binding domain KAM339_008660 PF00175 Oxidoreductase NAD-binding domain KAM339_008660 PF00970 Oxidoreductase FAD-binding domain KAM339_008670 PF00270 DEAD/DEAH box helicase KAM339_008670 PF00271 Helicase conserved C-terminal domain KAM339_008680 PF00990 Diguanylate cyclase, GGDEF domain KAM339_008690 PF05643 Putative bacterial lipoprotein (DUF799) KAM339_008710 PF03783 Curli production assembly/transport component CsgG KAM339_008750 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase KAM339_008770 PF12704 MacB-like periplasmic core domain KAM339_008770 PF00005 ABC transporter KAM339_008770 PF02687 FtsX-like permease family KAM339_008780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAM339_008790 PF00072 Response regulator receiver domain KAM339_008790 PF00486 Transcriptional regulatory protein, C terminal KAM339_008800 PF00672 HAMP domain KAM339_008800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_008800 PF16527 Two-component sensor protein CpxA, periplasmic domain KAM339_008800 PF00512 His Kinase A (phospho-acceptor) domain KAM339_008840 PF00445 Ribonuclease T2 family KAM339_008850 PF03060 Nitronate monooxygenase KAM339_008870 PF08343 Ribonucleotide reductase N-terminal KAM339_008870 PF02867 Ribonucleotide reductase, barrel domain KAM339_008870 PF00317 Ribonucleotide reductase, all-alpha domain KAM339_008890 PF02562 PhoH-like protein KAM339_008890 PF13638 PIN domain KAM339_008900 PF00005 ABC transporter KAM339_008910 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_008950 PF00694 Aconitase C-terminal domain KAM339_008960 PF00330 Aconitase family (aconitate hydratase) KAM339_008970 PF00180 Isocitrate/isopropylmalate dehydrogenase KAM339_008980 PF00682 HMGL-like KAM339_008980 PF08502 LeuA allosteric (dimerisation) domain KAM339_009000 PF01569 PAP2 superfamily KAM339_009030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAM339_009030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAM339_009030 PF00205 Thiamine pyrophosphate enzyme, central domain KAM339_009040 PF10369 Small subunit of acetolactate synthase KAM339_009050 PF07085 DRTGG domain KAM339_009050 PF01515 Phosphate acetyl/butaryl transferase KAM339_009060 PF00871 Acetokinase family KAM339_009070 PF04217 Protein of unknown function, DUF412 KAM339_009080 PF03887 YfbU domain KAM339_009090 PF00578 AhpC/TSA family KAM339_009100 PF01842 ACT domain KAM339_009110 PF00701 Dihydrodipicolinate synthetase family KAM339_009120 PF06804 NlpB/DapX lipoprotein KAM339_009130 PF01259 SAICAR synthetase KAM339_009150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_009150 PF03466 LysR substrate binding domain KAM339_009160 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KAM339_009200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_009200 PF00512 His Kinase A (phospho-acceptor) domain KAM339_009200 PF18415 Histidine kinase receptor ArcB trans-membrane domain KAM339_009200 PF01627 Hpt domain KAM339_009200 PF00072 Response regulator receiver domain KAM339_009200 PF00989 PAS fold KAM339_009210 PF01966 HD domain KAM339_009230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_009230 PF00512 His Kinase A (phospho-acceptor) domain KAM339_009230 PF09456 RcsC Alpha-Beta-Loop (ABL) KAM339_009230 PF00072 Response regulator receiver domain KAM339_009240 PF03707 Bacterial signalling protein N terminal repeat KAM339_009240 PF00990 Diguanylate cyclase, GGDEF domain KAM339_009240 PF00563 EAL domain KAM339_009250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_009250 PF08447 PAS fold KAM339_009250 PF13426 PAS domain KAM339_009260 PF02357 Transcription termination factor nusG KAM339_009270 PF03180 NLPA lipoprotein KAM339_009280 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_009290 PF09383 NIL domain KAM339_009290 PF00005 ABC transporter KAM339_009310 PF00480 ROK family KAM339_009320 PF08331 Domain of unknown function (DUF1730) KAM339_009330 PF01256 Carbohydrate kinase KAM339_009330 PF03853 YjeF-related protein N-terminus KAM339_009340 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KAM339_009350 PF01520 N-acetylmuramoyl-L-alanine amidase KAM339_009360 PF08676 MutL C terminal dimerisation domain KAM339_009360 PF01119 DNA mismatch repair protein, C-terminal domain KAM339_009380 PF17209 Hfq protein KAM339_009390 PF01926 50S ribosome-binding GTPase KAM339_009390 PF16360 GTP-binding GTPase Middle Region KAM339_009390 PF13167 GTP-binding GTPase N-terminal KAM339_009400 PF01145 SPFH domain / Band 7 family KAM339_009400 PF12221 Bacterial membrane protein N terminal KAM339_009410 PF01145 SPFH domain / Band 7 family KAM339_009430 PF00348 Polyprenyl synthetase KAM339_009440 PF00829 Ribosomal prokaryotic L21 protein KAM339_009450 PF01016 Ribosomal L27 protein KAM339_009460 PF01018 GTP1/OBG KAM339_009460 PF01926 50S ribosome-binding GTPase KAM339_009470 PF07670 Nucleoside recognition KAM339_009490 PF00296 Luciferase-like monooxygenase KAM339_009510 PF00149 Calcineurin-like phosphoesterase KAM339_009520 PF04379 ApaG domain KAM339_009530 PF00398 Ribosomal RNA adenine dimethylase KAM339_009540 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KAM339_009550 PF09312 SurA N-terminal domain KAM339_009550 PF00639 PPIC-type PPIASE domain KAM339_009560 PF03968 OstA-like protein KAM339_009560 PF04453 LPS transport system D KAM339_009570 PF01636 Phosphotransferase enzyme family KAM339_009580 PF00483 Nucleotidyl transferase KAM339_009590 PF00226 DnaJ domain KAM339_009590 PF05099 Tellurite resistance protein TerB KAM339_009600 PF00860 Permease family KAM339_009620 PF12848 ABC transporter KAM339_009620 PF00005 ABC transporter KAM339_009630 PF01464 Transglycosylase SLT domain KAM339_009640 PF00535 Glycosyl transferase family 2 KAM339_009660 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase KAM339_009670 PF01370 NAD dependent epimerase/dehydratase family KAM339_009680 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KAM339_009680 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KAM339_009680 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KAM339_009710 PF00005 ABC transporter KAM339_009720 PF01032 FecCD transport family KAM339_009740 PF06228 Haem utilisation ChuX/HutX KAM339_009750 PF01243 Pyridoxamine 5'-phosphate oxidase KAM339_009790 PF00593 TonB dependent receptor KAM339_009790 PF07715 TonB-dependent Receptor Plug Domain KAM339_009800 PF12832 MFS_1 like family KAM339_009810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_009810 PF00512 His Kinase A (phospho-acceptor) domain KAM339_009810 PF00989 PAS fold KAM339_009820 PF08329 Chitinase A, N-terminal domain KAM339_009820 PF00704 Glycosyl hydrolases family 18 KAM339_009830 PF13847 Methyltransferase domain KAM339_009840 PF13545 Crp-like helix-turn-helix domain KAM339_009840 PF00027 Cyclic nucleotide-binding domain KAM339_009850 PF02566 OsmC-like protein KAM339_009880 PF00485 Phosphoribulokinase / Uridine kinase family KAM339_009890 PF06794 Uncharacterised protein family (UPF0270) KAM339_009900 PF00360 Phytochrome region KAM339_009900 PF00990 Diguanylate cyclase, GGDEF domain KAM339_009900 PF01590 GAF domain KAM339_009900 PF00563 EAL domain KAM339_009910 PF00561 alpha/beta hydrolase fold KAM339_009920 PF00072 Response regulator receiver domain KAM339_009920 PF01584 CheW-like domain KAM339_009940 PF09526 Probable metal-binding protein (DUF2387) KAM339_009950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAM339_009960 PF04102 SlyX KAM339_009980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAM339_009980 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KAM339_009990 PF02954 Bacterial regulatory protein, Fis family KAM339_009990 PF00072 Response regulator receiver domain KAM339_009990 PF00158 Sigma-54 interaction domain KAM339_010030 PF02872 5'-nucleotidase, C-terminal domain KAM339_010030 PF00149 Calcineurin-like phosphoesterase KAM339_010050 PF00772 DnaB-like helicase N terminal domain KAM339_010050 PF03796 DnaB-like helicase C terminal domain KAM339_010060 PF00842 Alanine racemase, C-terminal domain KAM339_010060 PF01168 Alanine racemase, N-terminal domain KAM339_010070 PF00171 Aldehyde dehydrogenase family KAM339_010070 PF01619 Proline dehydrogenase KAM339_010070 PF14850 DNA-binding domain of Proline dehydrogenase KAM339_010070 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KAM339_010090 PF10415 Fumarase C C-terminus KAM339_010090 PF00206 Lyase KAM339_010110 PF00529 HlyD membrane-fusion protein of T1SS KAM339_010110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAM339_010120 PF07690 Major Facilitator Superfamily KAM339_010130 PF03575 Peptidase family S51 KAM339_010140 PF00196 Bacterial regulatory proteins, luxR family KAM339_010140 PF00072 Response regulator receiver domain KAM339_010150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_010150 PF00512 His Kinase A (phospho-acceptor) domain KAM339_010150 PF00989 PAS fold KAM339_010160 PF13247 4Fe-4S dicluster domain KAM339_010170 PF03916 Polysulphide reductase, NrfD KAM339_010180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAM339_010180 PF00384 Molybdopterin oxidoreductase KAM339_010180 PF01568 Molydopterin dinucleotide binding domain KAM339_010220 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KAM339_010220 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KAM339_010230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_010230 PF03466 LysR substrate binding domain KAM339_010240 PF01810 LysE type translocator KAM339_010250 PF01136 Peptidase family U32 KAM339_010250 PF12392 Collagenase KAM339_010270 PF06906 Protein of unknown function (DUF1272) KAM339_010290 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KAM339_010290 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAM339_010300 PF12833 Helix-turn-helix domain KAM339_010300 PF00730 HhH-GPD superfamily base excision DNA repair protein KAM339_010300 PF06029 AlkA N-terminal domain KAM339_010300 PF02805 Metal binding domain of Ada KAM339_010310 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KAM339_010360 PF00106 short chain dehydrogenase KAM339_010370 PF03573 outer membrane porin, OprD family KAM339_010380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_010400 PF02447 GntP family permease KAM339_010410 PF01370 NAD dependent epimerase/dehydratase family KAM339_010420 PF01261 Xylose isomerase-like TIM barrel KAM339_010430 PF00596 Class II Aldolase and Adducin N-terminal domain KAM339_010440 PF07005 Sugar-binding N-terminal domain KAM339_010440 PF17042 Nucleotide-binding C-terminal domain KAM339_010450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KAM339_010450 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KAM339_010460 PF08220 DeoR-like helix-turn-helix domain KAM339_010460 PF00455 DeoR C terminal sensor domain KAM339_010480 PF07995 Glucose / Sorbosone dehydrogenase KAM339_010490 PF03976 Polyphosphate kinase 2 (PPK2) KAM339_010530 PF01817 Chorismate mutase type II KAM339_010530 PF00800 Prephenate dehydratase KAM339_010580 PF08349 Protein of unknown function (DUF1722) KAM339_010590 PF13411 MerR HTH family regulatory protein KAM339_010600 PF00875 DNA photolyase KAM339_010600 PF03441 FAD binding domain of DNA photolyase KAM339_010620 PF00106 short chain dehydrogenase KAM339_010700 PF00210 Ferritin-like domain KAM339_010710 PF03063 Prismane/CO dehydrogenase family KAM339_010720 PF00970 Oxidoreductase FAD-binding domain KAM339_010720 PF00042 Globin KAM339_010720 PF00175 Oxidoreductase NAD-binding domain KAM339_010730 PF16363 GDP-mannose 4,6 dehydratase KAM339_010750 PF01418 Helix-turn-helix domain, rpiR family KAM339_010750 PF01380 SIS domain KAM339_010780 PF01527 Transposase KAM339_010800 PF01380 SIS domain KAM339_010800 PF01418 Helix-turn-helix domain, rpiR family KAM339_010810 PF13006 Insertion element 4 transposase N-terminal KAM339_010810 PF01609 Transposase DDE domain KAM339_010840 PF01609 Transposase DDE domain KAM339_010840 PF05598 Transposase domain (DUF772) KAM339_010890 PF13426 PAS domain KAM339_010890 PF08447 PAS fold KAM339_010890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_010910 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KAM339_010910 PF01926 50S ribosome-binding GTPase KAM339_010940 PF13592 Winged helix-turn helix KAM339_010940 PF13358 DDE superfamily endonuclease KAM339_010970 PF00589 Phage integrase family KAM339_010970 PF13356 Arm DNA-binding domain KAM339_010980 PF00722 Glycosyl hydrolases family 16 KAM339_010990 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KAM339_011000 PF00232 Glycosyl hydrolase family 1 KAM339_011010 PF02378 Phosphotransferase system, EIIC KAM339_011010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KAM339_011020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KAM339_011030 PF02927 Cellulase N-terminal ig-like domain KAM339_011030 PF00759 Glycosyl hydrolase family 9 KAM339_011030 PF02018 Carbohydrate binding domain KAM339_011030 PF00404 Dockerin type I domain KAM339_011040 PF14310 Fibronectin type III-like domain KAM339_011040 PF00933 Glycosyl hydrolase family 3 N terminal domain KAM339_011040 PF01915 Glycosyl hydrolase family 3 C-terminal domain KAM339_011050 PF12729 Four helix bundle sensory module for signal transduction KAM339_011050 PF00672 HAMP domain KAM339_011050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_011060 PF13416 Bacterial extracellular solute-binding protein KAM339_011070 PF00356 Bacterial regulatory proteins, lacI family KAM339_011120 PF00873 AcrB/AcrD/AcrF family KAM339_011130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAM339_011130 PF00529 HlyD membrane-fusion protein of T1SS KAM339_011140 PF00072 Response regulator receiver domain KAM339_011140 PF00486 Transcriptional regulatory protein, C terminal KAM339_011150 PF00672 HAMP domain KAM339_011150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_011150 PF00512 His Kinase A (phospho-acceptor) domain KAM339_011160 PF01740 STAS domain KAM339_011160 PF00916 Sulfate permease family KAM339_011170 PF01740 STAS domain KAM339_011170 PF00916 Sulfate permease family KAM339_011180 PF01965 DJ-1/PfpI family KAM339_011190 PF08546 Ketopantoate reductase PanE/ApbA C terminal KAM339_011190 PF02558 Ketopantoate reductase PanE/ApbA KAM339_011200 PF04461 Protein of unknown function (DUF520) KAM339_011210 PF03502 Nucleoside-specific channel-forming protein, Tsx KAM339_011220 PF07690 Major Facilitator Superfamily KAM339_011240 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KAM339_011260 PF05175 Methyltransferase small domain KAM339_011270 PF01722 BolA-like protein KAM339_011280 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) KAM339_011280 PF11973 NQRA C-terminal domain KAM339_011290 PF03116 NQR2, RnfD, RnfE family KAM339_011300 PF04205 FMN-binding domain KAM339_011310 PF02508 Rnf-Nqr subunit, membrane protein KAM339_011320 PF02508 Rnf-Nqr subunit, membrane protein KAM339_011330 PF00175 Oxidoreductase NAD-binding domain KAM339_011330 PF00111 2Fe-2S iron-sulfur cluster binding domain KAM339_011330 PF00970 Oxidoreductase FAD-binding domain KAM339_011340 PF02424 ApbE family KAM339_011370 PF00817 impB/mucB/samB family KAM339_011370 PF11799 impB/mucB/samB family C-terminal domain KAM339_011370 PF11798 IMS family HHH motif KAM339_011380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_011380 PF00672 HAMP domain KAM339_011390 PF03466 LysR substrate binding domain KAM339_011390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_011420 PF01728 FtsJ-like methyltransferase KAM339_011420 PF18125 RlmM ferredoxin-like domain KAM339_011440 PF00180 Isocitrate/isopropylmalate dehydrogenase KAM339_011440 PF18324 Hypothetical protein TT1725 KAM339_011450 PF01367 5'-3' exonuclease, C-terminal SAM fold KAM339_011450 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KAM339_011470 PF11892 Domain of unknown function (DUF3412) KAM339_011470 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases KAM339_011470 PF03641 Possible lysine decarboxylase KAM339_011480 PF00990 Diguanylate cyclase, GGDEF domain KAM339_011500 PF14489 QueF-like protein KAM339_011500 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KAM339_011510 PF07348 Syd protein (SUKH-2) KAM339_011540 PF01527 Transposase KAM339_011570 PF01695 IstB-like ATP binding protein KAM339_011580 PF00665 Integrase core domain KAM339_011610 PF00075 RNase H KAM339_011700 PF00239 Resolvase, N terminal domain KAM339_011700 PF02796 Helix-turn-helix domain of resolvase KAM339_011760 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) KAM339_011810 PF04287 tRNA pseudouridine synthase C KAM339_011820 PF00849 RNA pseudouridylate synthase KAM339_011830 PF00258 Flavodoxin KAM339_011840 PF02264 LamB porin KAM339_011850 PF07148 Maltose operon periplasmic protein precursor (MalM) KAM339_011860 PF00367 phosphotransferase system, EIIB KAM339_011860 PF02378 Phosphotransferase system, EIIC KAM339_011870 PF11944 Protein of unknown function (DUF3461) KAM339_011880 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KAM339_011880 PF14602 Hexapeptide repeat of succinyl-transferase KAM339_011880 PF00132 Bacterial transferase hexapeptide (six repeats) KAM339_011890 PF01842 ACT domain KAM339_011890 PF08335 GlnD PII-uridylyltransferase KAM339_011890 PF01966 HD domain KAM339_011890 PF01909 Nucleotidyltransferase domain KAM339_011900 PF00557 Metallopeptidase family M24 KAM339_011910 PF00318 Ribosomal protein S2 KAM339_011920 PF00889 Elongation factor TS KAM339_011930 PF00696 Amino acid kinase family KAM339_011940 PF01765 Ribosome recycling factor KAM339_011950 PF01255 Putative undecaprenyl diphosphate synthase KAM339_011970 PF13288 DXP reductoisomerase C-terminal domain KAM339_011970 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KAM339_011970 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KAM339_011980 PF02163 Peptidase family M50 KAM339_011980 PF17820 PDZ domain KAM339_011990 PF01103 Surface antigen KAM339_011990 PF07244 Surface antigen variable number repeat KAM339_012000 PF03938 Outer membrane protein (OmpH-like) KAM339_012010 PF00132 Bacterial transferase hexapeptide (six repeats) KAM339_012010 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KAM339_012020 PF07977 FabA-like domain KAM339_012030 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KAM339_012030 PF00132 Bacterial transferase hexapeptide (six repeats) KAM339_012040 PF02684 Lipid-A-disaccharide synthetase KAM339_012050 PF01351 Ribonuclease HII KAM339_012060 PF14579 Helix-hairpin-helix motif KAM339_012060 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KAM339_012060 PF07733 Bacterial DNA polymerase III alpha NTPase domain KAM339_012060 PF01336 OB-fold nucleic acid binding domain KAM339_012060 PF02811 PHP domain KAM339_012070 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KAM339_012090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_012090 PF03466 LysR substrate binding domain KAM339_012110 PF13520 Amino acid permease KAM339_012130 PF16326 ABC transporter C-terminal domain KAM339_012130 PF12848 ABC transporter KAM339_012130 PF00005 ABC transporter KAM339_012150 PF01431 Peptidase family M13 KAM339_012150 PF05649 Peptidase family M13 KAM339_012160 PF09179 TilS substrate binding domain KAM339_012160 PF01171 PP-loop family KAM339_012160 PF11734 TilS substrate C-terminal domain KAM339_012170 PF00990 Diguanylate cyclase, GGDEF domain KAM339_012180 PF00999 Sodium/hydrogen exchanger family KAM339_012180 PF02080 TrkA-C domain KAM339_012180 PF02254 TrkA-N domain KAM339_012220 PF00196 Bacterial regulatory proteins, luxR family KAM339_012220 PF00072 Response regulator receiver domain KAM339_012240 PF00128 Alpha amylase, catalytic domain KAM339_012270 PF00535 Glycosyl transferase family 2 KAM339_012300 PF01471 Putative peptidoglycan binding domain KAM339_012300 PF03734 L,D-transpeptidase catalytic domain KAM339_012310 PF05951 Bacterial protein of unknown function (DUF882) KAM339_012330 PF03458 UPF0126 domain KAM339_012350 PF02463 RecF/RecN/SMC N terminal domain KAM339_012350 PF06470 SMC proteins Flexible Hinge Domain KAM339_012360 PF04354 ZipA, C-terminal FtsZ-binding domain KAM339_012370 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KAM339_012370 PF03120 NAD-dependent DNA ligase OB-fold domain KAM339_012370 PF01653 NAD-dependent DNA ligase adenylation domain KAM339_012370 PF00533 BRCA1 C Terminus (BRCT) domain KAM339_012370 PF12826 Helix-hairpin-helix motif KAM339_012390 PF03477 ATP cone domain KAM339_012390 PF13597 Anaerobic ribonucleoside-triphosphate reductase KAM339_012420 PF01679 Proteolipid membrane potential modulator KAM339_012460 PF00529 HlyD membrane-fusion protein of T1SS KAM339_012460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAM339_012470 PF01047 MarR family KAM339_012480 PF00989 PAS fold KAM339_012480 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KAM339_012480 PF17203 Single cache domain 3 KAM339_012480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_012490 PF00072 Response regulator receiver domain KAM339_012490 PF12431 Transcriptional regulator KAM339_012510 PF00248 Aldo/keto reductase family KAM339_012520 PF00892 EamA-like transporter family KAM339_012540 PF00171 Aldehyde dehydrogenase family KAM339_012550 PF00158 Sigma-54 interaction domain KAM339_012550 PF02954 Bacterial regulatory protein, Fis family KAM339_012550 PF01590 GAF domain KAM339_012560 PF07694 5TMR of 5TMR-LYT KAM339_012560 PF00990 Diguanylate cyclase, GGDEF domain KAM339_012570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAM339_012580 PF00072 Response regulator receiver domain KAM339_012580 PF00486 Transcriptional regulatory protein, C terminal KAM339_012590 PF00989 PAS fold KAM339_012590 PF00512 His Kinase A (phospho-acceptor) domain KAM339_012590 PF11808 Phosphate regulon sensor protein PhoR KAM339_012590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_012600 PF12849 PBP superfamily domain KAM339_012610 PF01435 Peptidase family M48 KAM339_012630 PF00480 ROK family KAM339_012640 PF03932 CutC family KAM339_012650 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KAM339_012650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAM339_012660 PF00005 ABC transporter KAM339_012690 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAM339_012700 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_012710 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_012720 PF00005 ABC transporter KAM339_012740 PF00293 NUDIX domain KAM339_012750 PF08534 Redoxin KAM339_012760 PF01699 Sodium/calcium exchanger protein KAM339_012770 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KAM339_012770 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KAM339_012780 PF01235 Sodium:alanine symporter family KAM339_012800 PF00860 Permease family KAM339_012810 PF00990 Diguanylate cyclase, GGDEF domain KAM339_012810 PF00072 Response regulator receiver domain KAM339_012820 PF10692 Protein of unknown function (DUF2498) KAM339_012830 PF01554 MatE KAM339_012840 PF12833 Helix-turn-helix domain KAM339_012850 PF03949 Malic enzyme, NAD binding domain KAM339_012850 PF00390 Malic enzyme, N-terminal domain KAM339_012860 PF00691 OmpA family KAM339_012860 PF01389 OmpA-like transmembrane domain KAM339_012870 PF00691 OmpA family KAM339_012870 PF01389 OmpA-like transmembrane domain KAM339_012880 PF00691 OmpA family KAM339_012880 PF01389 OmpA-like transmembrane domain KAM339_012910 PF00209 Sodium:neurotransmitter symporter family KAM339_012920 PF01734 Patatin-like phospholipase KAM339_012930 PF17158 Membrane-associated sensor, integral membrane domain KAM339_012930 PF00990 Diguanylate cyclase, GGDEF domain KAM339_012950 PF00873 AcrB/AcrD/AcrF family KAM339_012960 PF08497 Radical SAM N-terminal KAM339_012960 PF04055 Radical SAM superfamily KAM339_012960 PF11842 Domain of unknown function (DUF3362) KAM339_013010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KAM339_013030 PF02075 Crossover junction endodeoxyribonuclease RuvC KAM339_013040 PF00230 Major intrinsic protein KAM339_013050 PF01464 Transglycosylase SLT domain KAM339_013050 PF10145 Phage-related minor tail protein KAM339_013050 PF01551 Peptidase family M23 KAM339_013080 PF13396 Phospholipase_D-nuclease N-terminal KAM339_013080 PF13091 PLD-like domain KAM339_013100 PF01842 ACT domain KAM339_013100 PF00551 Formyl transferase KAM339_013110 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KAM339_013130 PF00085 Thioredoxin KAM339_013140 PF01648 4'-phosphopantetheinyl transferase superfamily KAM339_013150 PF00877 NlpC/P60 family KAM339_013160 PF05971 RNA methyltransferase KAM339_013170 PF01575 MaoC like domain KAM339_013190 PF01476 LysM domain KAM339_013190 PF17969 L,D-transpeptidase C-terminal domain KAM339_013190 PF03734 L,D-transpeptidase catalytic domain KAM339_013200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_013200 PF00072 Response regulator receiver domain KAM339_013200 PF09308 LuxQ, periplasmic KAM339_013200 PF00512 His Kinase A (phospho-acceptor) domain KAM339_013220 PF10725 Protein of unknown function (DUF2517) KAM339_013230 PF00512 His Kinase A (phospho-acceptor) domain KAM339_013230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_013230 PF01627 Hpt domain KAM339_013230 PF00989 PAS fold KAM339_013230 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAM339_013230 PF00072 Response regulator receiver domain KAM339_013240 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KAM339_013250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAM339_013250 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KAM339_013260 PF02690 Na+/Pi-cotransporter KAM339_013280 PF13520 Amino acid permease KAM339_013290 PF00324 Amino acid permease KAM339_013310 PF00202 Aminotransferase class-III KAM339_013320 PF00171 Aldehyde dehydrogenase family KAM339_013330 PF07883 Cupin domain KAM339_013330 PF01381 Helix-turn-helix KAM339_013340 PF01266 FAD dependent oxidoreductase KAM339_013400 PF00158 Sigma-54 interaction domain KAM339_013400 PF00072 Response regulator receiver domain KAM339_013400 PF02954 Bacterial regulatory protein, Fis family KAM339_013410 PF00999 Sodium/hydrogen exchanger family KAM339_013410 PF02254 TrkA-N domain KAM339_013440 PF04381 Putative exonuclease, RdgC KAM339_013450 PF00583 Acetyltransferase (GNAT) family KAM339_013470 PF00149 Calcineurin-like phosphoesterase KAM339_013470 PF12320 Type 5 capsule protein repressor C-terminal domain KAM339_013490 PF01292 Prokaryotic cytochrome b561 KAM339_013500 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KAM339_013510 PF02896 PEP-utilising enzyme, TIM barrel domain KAM339_013510 PF05524 PEP-utilising enzyme, N-terminal KAM339_013510 PF00391 PEP-utilising enzyme, mobile domain KAM339_013520 PF00381 PTS HPr component phosphorylation site KAM339_013530 PF00291 Pyridoxal-phosphate dependent enzyme KAM339_013540 PF06480 FtsH Extracellular KAM339_013540 PF01434 Peptidase family M41 KAM339_013540 PF17862 AAA+ lid domain KAM339_013540 PF00004 ATPase family associated with various cellular activities (AAA) KAM339_013560 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KAM339_013560 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KAM339_013570 PF18389 TrmO C-terminal domain KAM339_013570 PF01980 tRNA-methyltransferase O KAM339_013610 PF00005 ABC transporter KAM339_013610 PF00664 ABC transporter transmembrane region KAM339_013620 PF00664 ABC transporter transmembrane region KAM339_013620 PF00005 ABC transporter KAM339_013630 PF00072 Response regulator receiver domain KAM339_013630 PF00486 Transcriptional regulatory protein, C terminal KAM339_013650 PF03737 Aldolase/RraA KAM339_013680 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) KAM339_013690 PF00588 SpoU rRNA Methylase family KAM339_013700 PF13840 ACT domain KAM339_013700 PF00742 Homoserine dehydrogenase KAM339_013700 PF00696 Amino acid kinase family KAM339_013700 PF01842 ACT domain KAM339_013700 PF03447 Homoserine dehydrogenase, NAD binding domain KAM339_013710 PF00288 GHMP kinases N terminal domain KAM339_013710 PF08544 GHMP kinases C terminal KAM339_013720 PF14821 Threonine synthase N terminus KAM339_013720 PF00291 Pyridoxal-phosphate dependent enzyme KAM339_013780 PF02028 BCCT, betaine/carnitine/choline family transporter KAM339_013800 PF05114 Protein of unknown function (DUF692) KAM339_013840 PF08447 PAS fold KAM339_013840 PF13426 PAS domain KAM339_013840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_013890 PF04632 Fusaric acid resistance protein family KAM339_013900 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KAM339_013910 PF12804 MobA-like NTP transferase domain KAM339_013920 PF00390 Malic enzyme, N-terminal domain KAM339_013920 PF03949 Malic enzyme, NAD binding domain KAM339_013940 PF00860 Permease family KAM339_013960 PF10282 Lactonase, 7-bladed beta-propeller KAM339_013970 PF01810 LysE type translocator KAM339_013980 PF00924 Mechanosensitive ion channel KAM339_013980 PF12795 Mechanosensitive ion channel porin domain KAM339_013980 PF12794 Mechanosensitive ion channel inner membrane domain 1 KAM339_013990 PF00224 Pyruvate kinase, barrel domain KAM339_013990 PF02887 Pyruvate kinase, alpha/beta domain KAM339_014000 PF08007 Cupin superfamily protein KAM339_014010 PF00206 Lyase KAM339_014010 PF08328 Adenylosuccinate lyase C-terminal KAM339_014020 PF04356 Protein of unknown function (DUF489) KAM339_014040 PF00293 NUDIX domain KAM339_014050 PF00849 RNA pseudouridylate synthase KAM339_014060 PF00583 Acetyltransferase (GNAT) family KAM339_014070 PF09278 MerR, DNA binding KAM339_014070 PF00376 MerR family regulatory protein KAM339_014080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAM339_014080 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAM339_014160 PF00180 Isocitrate/isopropylmalate dehydrogenase KAM339_014180 PF00291 Pyridoxal-phosphate dependent enzyme KAM339_014190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_014190 PF03466 LysR substrate binding domain KAM339_014200 PF00816 H-NS histone family KAM339_014210 PF00793 DAHP synthetase I family KAM339_014220 PF04954 Siderophore-interacting protein KAM339_014220 PF08021 Siderophore-interacting FAD-binding domain KAM339_014230 PF02321 Outer membrane efflux protein KAM339_014240 PF12704 MacB-like periplasmic core domain KAM339_014240 PF02687 FtsX-like permease family KAM339_014240 PF00005 ABC transporter KAM339_014250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAM339_014270 PF02463 RecF/RecN/SMC N terminal domain KAM339_014280 PF00990 Diguanylate cyclase, GGDEF domain KAM339_014280 PF17158 Membrane-associated sensor, integral membrane domain KAM339_014290 PF01513 ATP-NAD kinase KAM339_014310 PF01025 GrpE KAM339_014320 PF00012 Hsp70 protein KAM339_014330 PF00684 DnaJ central domain KAM339_014330 PF01556 DnaJ C terminal domain KAM339_014330 PF00226 DnaJ domain KAM339_014340 PF11471 Maltoporin periplasmic N-terminal extension KAM339_014340 PF02264 LamB porin KAM339_014350 PF00294 pfkB family carbohydrate kinase KAM339_014360 PF02378 Phosphotransferase system, EIIC KAM339_014360 PF00367 phosphotransferase system, EIIB KAM339_014380 PF00251 Glycosyl hydrolases family 32 N-terminal domain KAM339_014380 PF08244 Glycosyl hydrolases family 32 C terminal KAM339_014390 PF00356 Bacterial regulatory proteins, lacI family KAM339_014390 PF13407 Periplasmic binding protein domain KAM339_014400 PF02308 MgtC family KAM339_014420 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAM339_014440 PF01022 Bacterial regulatory protein, arsR family KAM339_014450 PF04143 Sulphur transport KAM339_014480 PF00873 AcrB/AcrD/AcrF family KAM339_014490 PF00563 EAL domain KAM339_014490 PF00990 Diguanylate cyclase, GGDEF domain KAM339_014490 PF03707 Bacterial signalling protein N terminal repeat KAM339_014500 PF03099 Biotin/lipoate A/B protein ligase family KAM339_014500 PF10437 Bacterial lipoate protein ligase C-terminus KAM339_014530 PF00873 AcrB/AcrD/AcrF family KAM339_014540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAM339_014540 PF00529 HlyD membrane-fusion protein of T1SS KAM339_014560 PF01609 Transposase DDE domain KAM339_014560 PF13006 Insertion element 4 transposase N-terminal KAM339_014570 PF03372 Endonuclease/Exonuclease/phosphatase family KAM339_014590 PF00072 Response regulator receiver domain KAM339_014600 PF00011 Hsp20/alpha crystallin family KAM339_014610 PF02424 ApbE family KAM339_014620 PF00127 Copper binding proteins, plastocyanin/azurin family KAM339_014650 PF01047 MarR family KAM339_014680 PF12323 Helix-turn-helix domain KAM339_014680 PF01385 Probable transposase KAM339_014680 PF07282 Putative transposase DNA-binding domain KAM339_014690 PF01156 Inosine-uridine preferring nucleoside hydrolase KAM339_014710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_014710 PF03466 LysR substrate binding domain KAM339_014720 PF02627 Carboxymuconolactone decarboxylase family KAM339_014730 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KAM339_014730 PF06481 COX Aromatic Rich Motif KAM339_014740 PF00115 Cytochrome C and Quinol oxidase polypeptide I KAM339_014750 PF00510 Cytochrome c oxidase subunit III KAM339_014760 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KAM339_014770 PF01040 UbiA prenyltransferase family KAM339_014780 PF07690 Major Facilitator Superfamily KAM339_014790 PF07237 Protein of unknown function (DUF1428) KAM339_014800 PF01609 Transposase DDE domain KAM339_014800 PF13006 Insertion element 4 transposase N-terminal KAM339_014810 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KAM339_014820 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_014830 PF00005 ABC transporter KAM339_014840 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KAM339_014860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_014860 PF03466 LysR substrate binding domain KAM339_014900 PF07804 HipA-like C-terminal domain KAM339_014900 PF13657 HipA N-terminal domain KAM339_014910 PF01381 Helix-turn-helix KAM339_014920 PF00669 Bacterial flagellin N-terminal helical region KAM339_014920 PF07196 Flagellin hook IN motif KAM339_014920 PF00700 Bacterial flagellin C-terminal helical region KAM339_014930 PF01609 Transposase DDE domain KAM339_014930 PF13808 DDE_Tnp_1-associated KAM339_014940 PF05598 Transposase domain (DUF772) KAM339_014940 PF01609 Transposase DDE domain KAM339_014950 PF00669 Bacterial flagellin N-terminal helical region KAM339_014950 PF00700 Bacterial flagellin C-terminal helical region KAM339_014950 PF07196 Flagellin hook IN motif KAM339_014960 PF00290 Tryptophan synthase alpha chain KAM339_014970 PF00291 Pyridoxal-phosphate dependent enzyme KAM339_014980 PF00218 Indole-3-glycerol phosphate synthase KAM339_014980 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KAM339_014990 PF00591 Glycosyl transferase family, a/b domain KAM339_014990 PF02885 Glycosyl transferase family, helical bundle domain KAM339_015000 PF02885 Glycosyl transferase family, helical bundle domain KAM339_015000 PF00591 Glycosyl transferase family, a/b domain KAM339_015000 PF00117 Glutamine amidotransferase class-I KAM339_015010 PF00425 chorismate binding enzyme KAM339_015010 PF04715 Anthranilate synthase component I, N terminal region KAM339_015020 PF02811 PHP domain KAM339_015030 PF01300 Telomere recombination KAM339_015040 PF02616 Segregation and condensation protein ScpA KAM339_015050 PF04079 Segregation and condensation complex subunit ScpB KAM339_015060 PF00849 RNA pseudouridylate synthase KAM339_015060 PF01479 S4 domain KAM339_015100 PF08361 MAATS-type transcriptional repressor, C-terminal region KAM339_015100 PF00440 Bacterial regulatory proteins, tetR family KAM339_015110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAM339_015110 PF00529 HlyD membrane-fusion protein of T1SS KAM339_015120 PF00873 AcrB/AcrD/AcrF family KAM339_015130 PF02321 Outer membrane efflux protein KAM339_015160 PF00440 Bacterial regulatory proteins, tetR family KAM339_015170 PF02770 Acyl-CoA dehydrogenase, middle domain KAM339_015170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAM339_015170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAM339_015170 PF09317 Domain of unknown function (DUF1974) KAM339_015180 PF00873 AcrB/AcrD/AcrF family KAM339_015200 PF02887 Pyruvate kinase, alpha/beta domain KAM339_015200 PF00224 Pyruvate kinase, barrel domain KAM339_015210 PF01380 SIS domain KAM339_015210 PF01418 Helix-turn-helix domain, rpiR family KAM339_015220 PF01609 Transposase DDE domain KAM339_015220 PF13808 DDE_Tnp_1-associated KAM339_015230 PF01380 SIS domain KAM339_015230 PF01418 Helix-turn-helix domain, rpiR family KAM339_015240 PF01609 Transposase DDE domain KAM339_015260 PF01609 Transposase DDE domain KAM339_015270 PF02685 Glucokinase KAM339_015280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_015290 PF00072 Response regulator receiver domain KAM339_015290 PF00486 Transcriptional regulatory protein, C terminal KAM339_015300 PF16363 GDP-mannose 4,6 dehydratase KAM339_015310 PF04321 RmlD substrate binding domain KAM339_015320 PF00483 Nucleotidyl transferase KAM339_015330 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KAM339_015340 PF01943 Polysaccharide biosynthesis protein KAM339_015350 PF03275 UDP-galactopyranose mutase KAM339_015370 PF00535 Glycosyl transferase family 2 KAM339_015390 PF00535 Glycosyl transferase family 2 KAM339_015400 PF01370 NAD dependent epimerase/dehydratase family KAM339_015410 PF02397 Bacterial sugar transferase KAM339_015420 PF02719 Polysaccharide biosynthesis protein KAM339_015450 PF02706 Chain length determinant protein KAM339_015500 PF04337 Protein of unknown function, DUF480 KAM339_015510 PF00271 Helicase conserved C-terminal domain KAM339_015510 PF00176 SNF2 family N-terminal domain KAM339_015510 PF04434 SWIM zinc finger KAM339_015520 PF05472 DNA replication terminus site-binding protein (Ter protein) KAM339_015550 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KAM339_015560 PF00676 Dehydrogenase E1 component KAM339_015570 PF02780 Transketolase, C-terminal domain KAM339_015570 PF02779 Transketolase, pyrimidine binding domain KAM339_015580 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KAM339_015580 PF00364 Biotin-requiring enzyme KAM339_015580 PF02817 e3 binding domain KAM339_015590 PF00313 'Cold-shock' DNA-binding domain KAM339_015640 PF12323 Helix-turn-helix domain KAM339_015640 PF01385 Probable transposase KAM339_015640 PF07282 Putative transposase DNA-binding domain KAM339_015660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAM339_015670 PF00892 EamA-like transporter family KAM339_015690 PF01966 HD domain KAM339_015700 PF00849 RNA pseudouridylate synthase KAM339_015700 PF01479 S4 domain KAM339_015720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAM339_015740 PF07282 Putative transposase DNA-binding domain KAM339_015740 PF01385 Probable transposase KAM339_015740 PF12323 Helix-turn-helix domain KAM339_015750 PF12850 Calcineurin-like phosphoesterase superfamily domain KAM339_015780 PF13144 Chaperone for flagella basal body P-ring formation KAM339_015790 PF01584 CheW-like domain KAM339_015790 PF00072 Response regulator receiver domain KAM339_015800 PF01739 CheR methyltransferase, SAM binding domain KAM339_015800 PF03705 CheR methyltransferase, all-alpha domain KAM339_015810 PF00460 Flagella basal body rod protein KAM339_015820 PF00460 Flagella basal body rod protein KAM339_015820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KAM339_015840 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KAM339_015840 PF07559 Flagellar basal body protein FlaE KAM339_015840 PF00460 Flagella basal body rod protein KAM339_015850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KAM339_015850 PF00460 Flagella basal body rod protein KAM339_015860 PF00460 Flagella basal body rod protein KAM339_015860 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KAM339_015870 PF02107 Flagellar L-ring protein KAM339_015880 PF02119 Flagellar P-ring protein KAM339_015890 PF10135 Rod binding protein KAM339_015890 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KAM339_015900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KAM339_015900 PF07196 Flagellin hook IN motif KAM339_015920 PF03448 MgtE intracellular N domain KAM339_015920 PF01769 Divalent cation transporter KAM339_015920 PF00571 CBS domain KAM339_015930 PF02541 Ppx/GppA phosphatase family KAM339_015940 PF02503 Polyphosphate kinase middle domain KAM339_015940 PF13089 Polyphosphate kinase N-terminal domain KAM339_015940 PF13090 Polyphosphate kinase C-terminal domain 2 KAM339_015940 PF17941 Polyphosphate kinase C-terminal domain 1 KAM339_015950 PF01842 ACT domain KAM339_015970 PF00158 Sigma-54 interaction domain KAM339_015970 PF02954 Bacterial regulatory protein, Fis family KAM339_015970 PF06490 Flagellar regulatory protein FleQ KAM339_015980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_015980 PF00512 His Kinase A (phospho-acceptor) domain KAM339_015980 PF13188 PAS domain KAM339_015990 PF00158 Sigma-54 interaction domain KAM339_015990 PF00072 Response regulator receiver domain KAM339_015990 PF02954 Bacterial regulatory protein, Fis family KAM339_016000 PF01784 NIF3 (NGG1p interacting factor 3) KAM339_016010 PF00551 Formyl transferase KAM339_016020 PF00586 AIR synthase related protein, N-terminal domain KAM339_016020 PF02769 AIR synthase related protein, C-terminal domain KAM339_016050 PF00308 Bacterial dnaA protein KAM339_016060 PF00463 Isocitrate lyase family KAM339_016070 PF01274 Malate synthase KAM339_016080 PF14437 MafB19-like deaminase KAM339_016090 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_016100 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_016110 PF00005 ABC transporter KAM339_016120 PF01895 PhoU domain KAM339_016130 PF03471 Transporter associated domain KAM339_016130 PF01595 Cyclin M transmembrane N-terminal domain KAM339_016130 PF00571 CBS domain KAM339_016150 PF02310 B12 binding domain KAM339_016150 PF02607 B12 binding domain KAM339_016150 PF02574 Homocysteine S-methyltransferase KAM339_016150 PF00809 Pterin binding enzyme KAM339_016150 PF02965 Vitamin B12 dependent methionine synthase, activation domain KAM339_016160 PF13520 Amino acid permease KAM339_016170 PF04116 Fatty acid hydroxylase superfamily KAM339_016180 PF00005 ABC transporter KAM339_016190 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_016200 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAM339_016210 PF08448 PAS fold KAM339_016210 PF00990 Diguanylate cyclase, GGDEF domain KAM339_016220 PF01272 Transcription elongation factor, GreA/GreB, C-term KAM339_016220 PF14760 Rnk N-terminus KAM339_016250 PF00245 Alkaline phosphatase KAM339_016260 PF00245 Alkaline phosphatase KAM339_016270 PF01926 50S ribosome-binding GTPase KAM339_016280 PF07690 Major Facilitator Superfamily KAM339_016290 PF00850 Histone deacetylase domain KAM339_016310 PF13307 Helicase C-terminal domain KAM339_016310 PF06733 DEAD_2 KAM339_016320 PF13609 Gram-negative porin KAM339_016350 PF00155 Aminotransferase class I and II KAM339_016360 PF05872 Bacterial protein of unknown function (DUF853) KAM339_016390 PF03772 Competence protein KAM339_016390 PF00753 Metallo-beta-lactamase superfamily KAM339_016400 PF00005 ABC transporter KAM339_016400 PF00664 ABC transporter transmembrane region KAM339_016410 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KAM339_016420 PF03966 Trm112p-like protein KAM339_016430 PF02348 Cytidylyltransferase KAM339_016440 PF00196 Bacterial regulatory proteins, luxR family KAM339_016440 PF00072 Response regulator receiver domain KAM339_016450 PF01541 GIY-YIG catalytic domain KAM339_016450 PF02151 UvrB/uvrC motif KAM339_016450 PF08459 UvrC Helix-hairpin-helix N-terminal KAM339_016460 PF01066 CDP-alcohol phosphatidyltransferase KAM339_016470 PF13426 PAS domain KAM339_016470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_016470 PF08447 PAS fold KAM339_016480 PF08240 Alcohol dehydrogenase GroES-like domain KAM339_016480 PF00107 Zinc-binding dehydrogenase KAM339_016490 PF16925 Tetracyclin repressor-like, C-terminal domain KAM339_016490 PF00440 Bacterial regulatory proteins, tetR family KAM339_016500 PF04226 Transglycosylase associated protein KAM339_016510 PF00149 Calcineurin-like phosphoesterase KAM339_016530 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KAM339_016540 PF09190 DALR domain KAM339_016540 PF01406 tRNA synthetases class I (C) catalytic domain KAM339_016590 PF00665 Integrase core domain KAM339_016610 PF00580 UvrD/REP helicase N-terminal domain KAM339_016610 PF13361 UvrD-like helicase C-terminal domain KAM339_016630 PF01609 Transposase DDE domain KAM339_016630 PF13808 DDE_Tnp_1-associated KAM339_016650 PF13185 GAF domain KAM339_016650 PF00990 Diguanylate cyclase, GGDEF domain KAM339_016720 PF01169 Uncharacterized protein family UPF0016 KAM339_016730 PF01253 Translation initiation factor SUI1 KAM339_016750 PF07664 Ferrous iron transport protein B C terminus KAM339_016750 PF17910 FeoB cytosolic helical domain KAM339_016750 PF02421 Ferrous iron transport protein B KAM339_016750 PF07670 Nucleoside recognition KAM339_016770 PF00437 Type II/IV secretion system protein KAM339_016800 PF01032 FecCD transport family KAM339_016810 PF00005 ABC transporter KAM339_016820 PF00793 DAHP synthetase I family KAM339_016830 PF01219 Prokaryotic diacylglycerol kinase KAM339_016840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAM339_016840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAM339_016840 PF01842 ACT domain KAM339_016850 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KAM339_016860 PF01812 5-formyltetrahydrofolate cyclo-ligase family KAM339_016880 PF01113 Dihydrodipicolinate reductase, N-terminus KAM339_016880 PF05173 Dihydrodipicolinate reductase, C-terminus KAM339_016890 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KAM339_016890 PF00117 Glutamine amidotransferase class-I KAM339_016900 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAM339_016900 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KAM339_016900 PF02142 MGS-like domain KAM339_016910 PF08502 LeuA allosteric (dimerisation) domain KAM339_016910 PF00682 HMGL-like KAM339_016920 PF00990 Diguanylate cyclase, GGDEF domain KAM339_016930 PF07759 Protein of unknown function (DUF1615) KAM339_016980 PF00270 DEAD/DEAH box helicase KAM339_016980 PF00271 Helicase conserved C-terminal domain KAM339_017000 PF14521 Lysine-specific metallo-endopeptidase KAM339_017050 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAM339_017060 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_017070 PF00005 ABC transporter KAM339_017080 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAM339_017080 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KAM339_017090 PF01493 GXGXG motif KAM339_017090 PF04898 Glutamate synthase central domain KAM339_017090 PF00310 Glutamine amidotransferases class-II KAM339_017090 PF01645 Conserved region in glutamate synthase KAM339_017100 PF04055 Radical SAM superfamily KAM339_017100 PF16199 Radical_SAM C-terminal domain KAM339_017120 PF00664 ABC transporter transmembrane region KAM339_017120 PF00005 ABC transporter KAM339_017120 PF03412 Peptidase C39 family KAM339_017210 PF00324 Amino acid permease KAM339_017230 PF03618 Kinase/pyrophosphorylase KAM339_017240 PF00391 PEP-utilising enzyme, mobile domain KAM339_017240 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KAM339_017240 PF02896 PEP-utilising enzyme, TIM barrel domain KAM339_017250 PF00005 ABC transporter KAM339_017290 PF03180 NLPA lipoprotein KAM339_017300 PF01569 PAP2 superfamily KAM339_017310 PF11890 Domain of unknown function (DUF3410) KAM339_017310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAM339_017310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAM339_017320 PF01118 Semialdehyde dehydrogenase, NAD binding domain KAM339_017320 PF02774 Semialdehyde dehydrogenase, dimerisation domain KAM339_017340 PF01416 tRNA pseudouridine synthase KAM339_017350 PF01039 Carboxyl transferase domain KAM339_017350 PF17848 Acetyl-coA carboxylase zinc finger domain KAM339_017360 PF08245 Mur ligase middle domain KAM339_017360 PF02875 Mur ligase family, glutamate ligase domain KAM339_017370 PF05036 Sporulation related domain KAM339_017380 PF04358 DsrC like protein KAM339_017390 PF12805 FUSC-like inner membrane protein yccS KAM339_017400 PF01027 Inhibitor of apoptosis-promoting Bax1 KAM339_017420 PF07715 TonB-dependent Receptor Plug Domain KAM339_017420 PF07660 Secretin and TonB N terminus short domain KAM339_017420 PF00593 TonB dependent receptor KAM339_017450 PF04303 PrpF protein KAM339_017460 PF00330 Aconitase family (aconitate hydratase) KAM339_017460 PF00694 Aconitase C-terminal domain KAM339_017470 PF00285 Citrate synthase, C-terminal domain KAM339_017490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_017490 PF08447 PAS fold KAM339_017500 PF13426 PAS domain KAM339_017500 PF00563 EAL domain KAM339_017500 PF00990 Diguanylate cyclase, GGDEF domain KAM339_017510 PF00849 RNA pseudouridylate synthase KAM339_017530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAM339_017540 PF04209 homogentisate 1,2-dioxygenase KAM339_017560 PF14497 Glutathione S-transferase, C-terminal domain KAM339_017560 PF02798 Glutathione S-transferase, N-terminal domain KAM339_017590 PF00733 Asparagine synthase KAM339_017590 PF13537 Glutamine amidotransferase domain KAM339_017610 PF13344 Haloacid dehalogenase-like hydrolase KAM339_017620 PF00962 Adenosine/AMP deaminase KAM339_017630 PF08240 Alcohol dehydrogenase GroES-like domain KAM339_017630 PF00107 Zinc-binding dehydrogenase KAM339_017640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAM339_017650 PF03741 Integral membrane protein TerC family KAM339_017650 PF03471 Transporter associated domain KAM339_017670 PF01565 FAD binding domain KAM339_017670 PF13183 4Fe-4S dicluster domain KAM339_017670 PF02913 FAD linked oxidases, C-terminal domain KAM339_017690 PF03061 Thioesterase superfamily KAM339_017700 PF00270 DEAD/DEAH box helicase KAM339_017700 PF00271 Helicase conserved C-terminal domain KAM339_017700 PF03880 DbpA RNA binding domain KAM339_017720 PF00990 Diguanylate cyclase, GGDEF domain KAM339_017720 PF00563 EAL domain KAM339_017720 PF08448 PAS fold KAM339_017720 PF08447 PAS fold KAM339_017730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_017730 PF03466 LysR substrate binding domain KAM339_017740 PF07690 Major Facilitator Superfamily KAM339_017750 PF13726 Na+-H+ antiporter family KAM339_017750 PF03553 Na+/H+ antiporter family KAM339_017760 PF00929 Exonuclease KAM339_017780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_017780 PF00672 HAMP domain KAM339_017780 PF12729 Four helix bundle sensory module for signal transduction KAM339_017790 PF18393 MotY N-terminal domain KAM339_017790 PF00691 OmpA family KAM339_017800 PF00459 Inositol monophosphatase family KAM339_017820 PF00043 Glutathione S-transferase, C-terminal domain KAM339_017820 PF02798 Glutathione S-transferase, N-terminal domain KAM339_017830 PF00043 Glutathione S-transferase, C-terminal domain KAM339_017830 PF02798 Glutathione S-transferase, N-terminal domain KAM339_017850 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_017860 PF12911 N-terminal TM domain of oligopeptide transport permease C KAM339_017860 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_017870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAM339_017870 PF00005 ABC transporter KAM339_017880 PF07690 Major Facilitator Superfamily KAM339_017890 PF05164 Cell division protein ZapA KAM339_017900 PF03695 Uncharacterised protein family (UPF0149) KAM339_017910 PF01494 FAD binding domain KAM339_017920 PF01494 FAD binding domain KAM339_017930 PF01571 Aminomethyltransferase folate-binding domain KAM339_017930 PF08669 Glycine cleavage T-protein C-terminal barrel domain KAM339_017940 PF01597 Glycine cleavage H-protein KAM339_017950 PF02347 Glycine cleavage system P-protein KAM339_017970 PF08241 Methyltransferase domain KAM339_017970 PF13193 AMP-binding enzyme C-terminal domain KAM339_017970 PF00668 Condensation domain KAM339_017970 PF00501 AMP-binding enzyme KAM339_017970 PF00550 Phosphopantetheine attachment site KAM339_017970 PF00975 Thioesterase domain KAM339_017970 PF00391 PEP-utilising enzyme, mobile domain KAM339_017990 PF07690 Major Facilitator Superfamily KAM339_018000 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAM339_018000 PF13192 Thioredoxin domain KAM339_018010 PF10417 C-terminal domain of 1-Cys peroxiredoxin KAM339_018010 PF00578 AhpC/TSA family KAM339_018020 PF00571 CBS domain KAM339_018030 PF02547 Queuosine biosynthesis protein KAM339_018040 PF01702 Queuine tRNA-ribosyltransferase KAM339_018050 PF02699 Preprotein translocase subunit KAM339_018060 PF13721 SecD export protein N-terminal TM region KAM339_018060 PF02355 Protein export membrane protein KAM339_018060 PF07549 SecD/SecF GG Motif KAM339_018070 PF02355 Protein export membrane protein KAM339_018070 PF07549 SecD/SecF GG Motif KAM339_018080 PF00581 Rhodanese-like domain KAM339_018090 PF13181 Tetratricopeptide repeat KAM339_018090 PF07719 Tetratricopeptide repeat KAM339_018100 PF01136 Peptidase family U32 KAM339_018110 PF01136 Peptidase family U32 KAM339_018130 PF02036 SCP-2 sterol transfer family KAM339_018140 PF00588 SpoU rRNA Methylase family KAM339_018150 PF02082 Transcriptional regulator KAM339_018160 PF00266 Aminotransferase class-V KAM339_018170 PF01592 NifU-like N terminal domain KAM339_018180 PF01521 Iron-sulphur cluster biosynthesis KAM339_018190 PF00226 DnaJ domain KAM339_018190 PF07743 HSCB C-terminal oligomerisation domain KAM339_018200 PF00012 Hsp70 protein KAM339_018210 PF00111 2Fe-2S iron-sulfur cluster binding domain KAM339_018220 PF12404 Peptidase KAM339_018220 PF00883 Cytosol aminopeptidase family, catalytic domain KAM339_018230 PF12404 Peptidase KAM339_018230 PF00883 Cytosol aminopeptidase family, catalytic domain KAM339_018240 PF00334 Nucleoside diphosphate kinase KAM339_018250 PF04055 Radical SAM superfamily KAM339_018270 PF13464 Domain of unknown function (DUF4115) KAM339_018280 PF04551 GcpE protein KAM339_018290 PF03129 Anticodon binding domain KAM339_018290 PF13393 Histidyl-tRNA synthetase KAM339_018300 PF09976 Tetratricopeptide repeat-like domain KAM339_018310 PF13360 PQQ-like domain KAM339_018320 PF01926 50S ribosome-binding GTPase KAM339_018320 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KAM339_018330 PF07191 zinc-ribbons KAM339_018340 PF01464 Transglycosylase SLT domain KAM339_018340 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAM339_018350 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KAM339_018350 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KAM339_018350 PF02769 AIR synthase related protein, C-terminal domain KAM339_018360 PF00361 Proton-conducting membrane transporter KAM339_018370 PF00361 Proton-conducting membrane transporter KAM339_018380 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KAM339_018380 PF00361 Proton-conducting membrane transporter KAM339_018390 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KAM339_018400 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KAM339_018410 PF12838 4Fe-4S dicluster domain KAM339_018420 PF00146 NADH dehydrogenase KAM339_018430 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAM339_018430 PF00384 Molybdopterin oxidoreductase KAM339_018430 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KAM339_018440 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KAM339_018440 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KAM339_018460 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KAM339_018460 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KAM339_018470 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KAM339_018480 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KAM339_018490 PF13677 Membrane MotB of proton-channel complex MotA/MotB KAM339_018490 PF00691 OmpA family KAM339_018500 PF01618 MotA/TolQ/ExbB proton channel family KAM339_018520 PF00665 Integrase core domain KAM339_018530 PF01695 IstB-like ATP binding protein KAM339_018580 PF02899 Phage integrase, N-terminal SAM-like domain KAM339_018580 PF00589 Phage integrase family KAM339_018610 PF04536 TPM domain KAM339_018630 PF03411 Penicillin-insensitive murein endopeptidase KAM339_018650 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KAM339_018660 PF00248 Aldo/keto reductase family KAM339_018690 PF01212 Beta-eliminating lyase KAM339_018710 PF00072 Response regulator receiver domain KAM339_018710 PF00486 Transcriptional regulatory protein, C terminal KAM339_018720 PF03466 LysR substrate binding domain KAM339_018720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_018740 PF03707 Bacterial signalling protein N terminal repeat KAM339_018740 PF13188 PAS domain KAM339_018740 PF00563 EAL domain KAM339_018740 PF00990 Diguanylate cyclase, GGDEF domain KAM339_018750 PF03806 AbgT putative transporter family KAM339_018760 PF00881 Nitroreductase family KAM339_018790 PF07690 Major Facilitator Superfamily KAM339_018800 PF03466 LysR substrate binding domain KAM339_018800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_018810 PF00925 GTP cyclohydrolase II KAM339_018820 PF02224 Cytidylate kinase KAM339_018830 PF00575 S1 RNA binding domain KAM339_018840 PF00216 Bacterial DNA-binding protein KAM339_018860 PF18073 Rubredoxin metal binding domain KAM339_018870 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KAM339_018900 PF06508 Queuosine biosynthesis protein QueC KAM339_018910 PF04055 Radical SAM superfamily KAM339_018920 PF12843 Putative quorum-sensing-regulated virulence factor KAM339_018930 PF01923 Cobalamin adenosyltransferase KAM339_018940 PF00816 H-NS histone family KAM339_018950 PF03553 Na+/H+ antiporter family KAM339_018960 PF00265 Thymidine kinase KAM339_018980 PF10722 Putative bacterial sensory transduction regulator KAM339_019000 PF01418 Helix-turn-helix domain, rpiR family KAM339_019000 PF01380 SIS domain KAM339_019010 PF00367 phosphotransferase system, EIIB KAM339_019010 PF02378 Phosphotransferase system, EIIC KAM339_019010 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KAM339_019020 PF00232 Glycosyl hydrolase family 1 KAM339_019060 PF00141 Peroxidase KAM339_019070 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KAM339_019070 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KAM339_019080 PF01053 Cys/Met metabolism PLP-dependent enzyme KAM339_019100 PF13460 NAD(P)H-binding KAM339_019110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_019110 PF03466 LysR substrate binding domain KAM339_019120 PF02311 AraC-like ligand binding domain KAM339_019120 PF12833 Helix-turn-helix domain KAM339_019130 PF00563 EAL domain KAM339_019130 PF12792 CSS motif domain associated with EAL KAM339_019140 PF17158 Membrane-associated sensor, integral membrane domain KAM339_019140 PF00990 Diguanylate cyclase, GGDEF domain KAM339_019150 PF07715 TonB-dependent Receptor Plug Domain KAM339_019150 PF00593 TonB dependent receptor KAM339_019170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_019170 PF03466 LysR substrate binding domain KAM339_019180 PF01717 Cobalamin-independent synthase, Catalytic domain KAM339_019180 PF08267 Cobalamin-independent synthase, N-terminal domain KAM339_019200 PF01743 Poly A polymerase head domain KAM339_019200 PF00571 CBS domain KAM339_019210 PF01266 FAD dependent oxidoreductase KAM339_019220 PF04244 Deoxyribodipyrimidine photo-lyase-related protein KAM339_019230 PF00768 D-alanyl-D-alanine carboxypeptidase KAM339_019240 PF03918 Cytochrome C biogenesis protein KAM339_019250 PF08534 Redoxin KAM339_019260 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KAM339_019260 PF01578 Cytochrome C assembly protein KAM339_019270 PF03916 Polysulphide reductase, NrfD KAM339_019280 PF00037 4Fe-4S binding domain KAM339_019280 PF13247 4Fe-4S dicluster domain KAM339_019290 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) KAM339_019290 PF13435 Cytochrome c554 and c-prime KAM339_019300 PF02335 Cytochrome c552 KAM339_019320 PF02754 Cysteine-rich domain KAM339_019320 PF13183 4Fe-4S dicluster domain KAM339_019330 PF00890 FAD binding domain KAM339_019340 PF04324 BFD-like [2Fe-2S] binding domain KAM339_019340 PF01266 FAD dependent oxidoreductase KAM339_019350 PF02810 SEC-C motif KAM339_019360 PF17200 Single Cache domain 2 KAM339_019360 PF00672 HAMP domain KAM339_019360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_019370 PF01047 MarR family KAM339_019370 PF00480 ROK family KAM339_019380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_019380 PF00989 PAS fold KAM339_019380 PF17203 Single cache domain 3 KAM339_019380 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KAM339_019390 PF00072 Response regulator receiver domain KAM339_019400 PF01970 Tripartite tricarboxylate transporter TctA family KAM339_019430 PF10145 Phage-related minor tail protein KAM339_019430 PF01551 Peptidase family M23 KAM339_019430 PF01464 Transglycosylase SLT domain KAM339_019440 PF02080 TrkA-C domain KAM339_019440 PF06826 Predicted Permease Membrane Region KAM339_019450 PF04851 Type III restriction enzyme, res subunit KAM339_019450 PF02151 UvrB/uvrC motif KAM339_019450 PF12344 Ultra-violet resistance protein B KAM339_019450 PF17757 UvrB interaction domain KAM339_019450 PF00271 Helicase conserved C-terminal domain KAM339_019470 PF09335 SNARE associated Golgi protein KAM339_019480 PF02600 Disulfide bond formation protein DsbB KAM339_019490 PF06450 Bacterial Na+/H+ antiporter B (NhaB) KAM339_019500 PF07840 FadR C-terminal domain KAM339_019500 PF00392 Bacterial regulatory proteins, gntR family KAM339_019510 PF04293 SpoVR like protein KAM339_019520 PF04285 Protein of unknown function (DUF444) KAM339_019530 PF08298 PrkA AAA domain KAM339_019530 PF06798 PrkA serine protein kinase C-terminal domain KAM339_019540 PF09382 RQC domain KAM339_019540 PF00270 DEAD/DEAH box helicase KAM339_019540 PF00570 HRDC domain KAM339_019540 PF00271 Helicase conserved C-terminal domain KAM339_019540 PF16124 RecQ zinc-binding KAM339_019550 PF00375 Sodium:dicarboxylate symporter family KAM339_019560 PF03222 Tryptophan/tyrosine permease family KAM339_019570 PF00293 NUDIX domain KAM339_019580 PF04715 Anthranilate synthase component I, N terminal region KAM339_019580 PF00425 chorismate binding enzyme KAM339_019620 PF00343 Carbohydrate phosphorylase KAM339_019640 PF00939 Sodium:sulfate symporter transmembrane region KAM339_019650 PF00085 Thioredoxin KAM339_019660 PF01627 Hpt domain KAM339_019660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_019660 PF00512 His Kinase A (phospho-acceptor) domain KAM339_019660 PF00072 Response regulator receiver domain KAM339_019660 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KAM339_019660 PF00672 HAMP domain KAM339_019670 PF00664 ABC transporter transmembrane region KAM339_019670 PF00005 ABC transporter KAM339_019680 PF00005 ABC transporter KAM339_019680 PF00664 ABC transporter transmembrane region KAM339_019720 PF01575 MaoC like domain KAM339_019730 PF00561 alpha/beta hydrolase fold KAM339_019730 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus KAM339_019770 PF08543 Phosphomethylpyrimidine kinase KAM339_019780 PF03992 Antibiotic biosynthesis monooxygenase KAM339_019790 PF13673 Acetyltransferase (GNAT) domain KAM339_019810 PF01928 CYTH domain KAM339_019830 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KAM339_019850 PF13673 Acetyltransferase (GNAT) domain KAM339_019860 PF00270 DEAD/DEAH box helicase KAM339_019860 PF00271 Helicase conserved C-terminal domain KAM339_019870 PF00255 Glutathione peroxidase KAM339_019890 PF01820 D-ala D-ala ligase N-terminus KAM339_019890 PF07478 D-ala D-ala ligase C-terminus KAM339_019900 PF03942 DTW domain KAM339_019910 PF01925 Sulfite exporter TauE/SafE KAM339_019920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_019920 PF03466 LysR substrate binding domain KAM339_019950 PF11398 Protein of unknown function (DUF2813) KAM339_019970 PF00883 Cytosol aminopeptidase family, catalytic domain KAM339_019970 PF02789 Cytosol aminopeptidase family, N-terminal domain KAM339_019980 PF13419 Haloacid dehalogenase-like hydrolase KAM339_019990 PF07687 Peptidase dimerisation domain KAM339_019990 PF01546 Peptidase family M20/M25/M40 KAM339_020000 PF00365 Phosphofructokinase KAM339_020010 PF00121 Triosephosphate isomerase KAM339_020020 PF02698 DUF218 domain KAM339_020030 PF13847 Methyltransferase domain KAM339_020040 PF03882 MukF winged-helix domain KAM339_020040 PF17193 MukF C-terminal domain KAM339_020040 PF17192 MukF middle domain KAM339_020050 PF04288 MukE-like family KAM339_020060 PF04310 MukB N-terminal KAM339_020060 PF16330 MukB hinge domain KAM339_020070 PF05036 Sporulation related domain KAM339_020070 PF03330 Lytic transglycolase KAM339_020080 PF00689 Cation transporting ATPase, C-terminus KAM339_020080 PF00690 Cation transporter/ATPase, N-terminus KAM339_020130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_020130 PF03466 LysR substrate binding domain KAM339_020140 PF01048 Phosphorylase superfamily KAM339_020150 PF07670 Nucleoside recognition KAM339_020150 PF07662 Na+ dependent nucleoside transporter C-terminus KAM339_020150 PF01773 Na+ dependent nucleoside transporter N-terminus KAM339_020160 PF01791 DeoC/LacD family aldolase KAM339_020210 PF01810 LysE type translocator KAM339_020230 PF03831 PhnA domain KAM339_020230 PF08274 PhnA Zinc-Ribbon KAM339_020250 PF08329 Chitinase A, N-terminal domain KAM339_020250 PF00704 Glycosyl hydrolases family 18 KAM339_020300 PF01713 Smr domain KAM339_020310 PF05175 Methyltransferase small domain KAM339_020320 PF01264 Chorismate synthase KAM339_020340 PF00270 DEAD/DEAH box helicase KAM339_020340 PF00271 Helicase conserved C-terminal domain KAM339_020370 PF03222 Tryptophan/tyrosine permease family KAM339_020380 PF00356 Bacterial regulatory proteins, lacI family KAM339_020380 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KAM339_020390 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KAM339_020390 PF00381 PTS HPr component phosphorylation site KAM339_020400 PF00294 pfkB family carbohydrate kinase KAM339_020410 PF02378 Phosphotransferase system, EIIC KAM339_020410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KAM339_020420 PF06945 Protein of unknown function (DUF1289) KAM339_020430 PF06725 3D domain KAM339_020430 PF03562 MltA specific insert domain KAM339_020440 PF00111 2Fe-2S iron-sulfur cluster binding domain KAM339_020450 PF00268 Ribonucleotide reductase, small chain KAM339_020460 PF02867 Ribonucleotide reductase, barrel domain KAM339_020460 PF03477 ATP cone domain KAM339_020460 PF00317 Ribonucleotide reductase, all-alpha domain KAM339_020470 PF13419 Haloacid dehalogenase-like hydrolase KAM339_020490 PF03989 DNA gyrase C-terminal domain, beta-propeller KAM339_020490 PF00521 DNA gyrase/topoisomerase IV, subunit A KAM339_020500 PF04055 Radical SAM superfamily KAM339_020530 PF03129 Anticodon binding domain KAM339_020530 PF02824 TGS domain KAM339_020530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAM339_020530 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KAM339_020540 PF00707 Translation initiation factor IF-3, C-terminal domain KAM339_020540 PF05198 Translation initiation factor IF-3, N-terminal domain KAM339_020550 PF01632 Ribosomal protein L35 KAM339_020560 PF00453 Ribosomal protein L20 KAM339_020860 PF00717 Peptidase S24-like KAM339_020870 PF00817 impB/mucB/samB family KAM339_020870 PF13438 Domain of unknown function (DUF4113) KAM339_020870 PF11799 impB/mucB/samB family C-terminal domain KAM339_020990 PF06892 Phage regulatory protein CII (CP76) KAM339_021020 PF01381 Helix-turn-helix KAM339_021020 PF00717 Peptidase S24-like KAM339_021080 PF02899 Phage integrase, N-terminal SAM-like domain KAM339_021080 PF00589 Phage integrase family KAM339_021090 PF01409 tRNA synthetases class II core domain (F) KAM339_021090 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KAM339_021100 PF03483 B3/4 domain KAM339_021100 PF03147 Ferredoxin-fold anticodon binding domain KAM339_021100 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KAM339_021100 PF03484 tRNA synthetase B5 domain KAM339_021100 PF01588 Putative tRNA binding domain KAM339_021110 PF00216 Bacterial DNA-binding protein KAM339_021120 PF09456 RcsC Alpha-Beta-Loop (ABL) KAM339_021120 PF00512 His Kinase A (phospho-acceptor) domain KAM339_021120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_021120 PF00072 Response regulator receiver domain KAM339_021150 PF02146 Sir2 family KAM339_021170 PF00563 EAL domain KAM339_021170 PF00990 Diguanylate cyclase, GGDEF domain KAM339_021170 PF03707 Bacterial signalling protein N terminal repeat KAM339_021180 PF00356 Bacterial regulatory proteins, lacI family KAM339_021190 PF00294 pfkB family carbohydrate kinase KAM339_021200 PF13407 Periplasmic binding protein domain KAM339_021210 PF02653 Branched-chain amino acid transport system / permease component KAM339_021220 PF00005 ABC transporter KAM339_021230 PF05025 RbsD / FucU transport protein family KAM339_021240 PF02798 Glutathione S-transferase, N-terminal domain KAM339_021240 PF00043 Glutathione S-transferase, C-terminal domain KAM339_021270 PF01171 PP-loop family KAM339_021280 PF00582 Universal stress protein family KAM339_021290 PF00027 Cyclic nucleotide-binding domain KAM339_021290 PF13545 Crp-like helix-turn-helix domain KAM339_021320 PF00403 Heavy-metal-associated domain KAM339_021340 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP KAM339_021340 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KAM339_021370 PF00115 Cytochrome C and Quinol oxidase polypeptide I KAM339_021390 PF13185 GAF domain KAM339_021400 PF04352 ProQ/FINO family KAM339_021400 PF17516 ProQ C-terminal domain KAM339_021410 PF11818 C-terminal domain of tail specific protease (DUF3340) KAM339_021410 PF00595 PDZ domain KAM339_021410 PF03572 Peptidase family S41 KAM339_021410 PF17804 Tail specific protease N-terminal domain KAM339_021420 PF11940 Domain of unknown function (DUF3458) Ig-like fold KAM339_021420 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KAM339_021420 PF01433 Peptidase family M1 domain KAM339_021440 PF05088 Bacterial NAD-glutamate dehydrogenase KAM339_021450 PF01180 Dihydroorotate dehydrogenase KAM339_021460 PF07126 Cell-division protein ZapC KAM339_021470 PF07126 Cell-division protein ZapC KAM339_021480 PF10672 S-adenosylmethionine-dependent methyltransferase KAM339_021480 PF02926 THUMP domain KAM339_021480 PF01170 Putative RNA methylase family UPF0020 KAM339_021500 PF00005 ABC transporter KAM339_021500 PF16326 ABC transporter C-terminal domain KAM339_021500 PF12848 ABC transporter KAM339_021520 PF04957 Ribosome modulation factor KAM339_021530 PF07977 FabA-like domain KAM339_021540 PF13654 AAA domain KAM339_021540 PF05362 Lon protease (S16) C-terminal proteolytic domain KAM339_021560 PF07130 YebG protein KAM339_021580 PF04403 Paraquat-inducible protein A KAM339_021590 PF02470 MlaD protein KAM339_021600 PF01189 16S rRNA methyltransferase RsmB/F KAM339_021600 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF KAM339_021600 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF KAM339_021680 PF00589 Phage integrase family KAM339_021690 PF01026 TatD related DNase KAM339_021700 PF09115 DNA polymerase III, delta subunit, C terminal KAM339_021710 PF02223 Thymidylate kinase KAM339_021720 PF02618 YceG-like family KAM339_021730 PF01063 Amino-transferase class IV KAM339_021740 PF02801 Beta-ketoacyl synthase, C-terminal domain KAM339_021740 PF00109 Beta-ketoacyl synthase, N-terminal domain KAM339_021750 PF00550 Phosphopantetheine attachment site KAM339_021770 PF00698 Acyl transferase domain KAM339_021780 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KAM339_021780 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KAM339_021790 PF02504 Fatty acid synthesis protein KAM339_021800 PF01783 Ribosomal L32p protein family KAM339_021810 PF02620 Large ribosomal RNA subunit accumulation protein YceD KAM339_021830 PF02545 Maf-like protein KAM339_021840 PF00849 RNA pseudouridylate synthase KAM339_021840 PF01479 S4 domain KAM339_021850 PF12111 Polyribonucleotide phosphorylase C terminal KAM339_021850 PF10150 Ribonuclease E/G family KAM339_021850 PF00575 S1 RNA binding domain KAM339_021860 PF01384 Phosphate transporter family KAM339_021870 PF00692 dUTPase KAM339_021880 PF00485 Phosphoribulokinase / Uridine kinase family KAM339_021890 PF10609 NUBPL iron-transfer P-loop NTPase KAM339_021900 PF08264 Anticodon-binding domain of tRNA KAM339_021900 PF09334 tRNA synthetases class I (M) KAM339_021900 PF01588 Putative tRNA binding domain KAM339_021910 PF00043 Glutathione S-transferase, C-terminal domain KAM339_021910 PF02798 Glutathione S-transferase, N-terminal domain KAM339_021920 PF00708 Acylphosphatase KAM339_021930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_021930 PF00672 HAMP domain KAM339_021930 PF12729 Four helix bundle sensory module for signal transduction KAM339_021940 PF10672 S-adenosylmethionine-dependent methyltransferase KAM339_021940 PF17785 PUA-like domain KAM339_021980 PF00586 AIR synthase related protein, N-terminal domain KAM339_021980 PF02769 AIR synthase related protein, C-terminal domain KAM339_022000 PF00753 Metallo-beta-lactamase superfamily KAM339_022010 PF00072 Response regulator receiver domain KAM339_022020 PF00672 HAMP domain KAM339_022020 PF00512 His Kinase A (phospho-acceptor) domain KAM339_022020 PF01627 Hpt domain KAM339_022020 PF00072 Response regulator receiver domain KAM339_022020 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KAM339_022020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_022030 PF01386 Ribosomal L25p family KAM339_022050 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KAM339_022050 PF00270 DEAD/DEAH box helicase KAM339_022050 PF11898 Domain of unknown function (DUF3418) KAM339_022050 PF04408 Helicase associated domain (HA2) KAM339_022050 PF00271 Helicase conserved C-terminal domain KAM339_022060 PF01743 Poly A polymerase head domain KAM339_022060 PF02272 DHHA1 domain KAM339_022060 PF01368 DHH family KAM339_022060 PF00571 CBS domain KAM339_022070 PF00196 Bacterial regulatory proteins, luxR family KAM339_022070 PF00072 Response regulator receiver domain KAM339_022080 PF07670 Nucleoside recognition KAM339_022090 PF02678 Pirin KAM339_022090 PF05726 Pirin C-terminal cupin domain KAM339_022100 PF03466 LysR substrate binding domain KAM339_022100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_022110 PF02575 YbaB/EbfC DNA-binding family KAM339_022120 PF12169 DNA polymerase III subunits gamma and tau domain III KAM339_022120 PF12170 DNA polymerase III tau subunit V interacting with alpha KAM339_022120 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KAM339_022130 PF00156 Phosphoribosyl transferase domain KAM339_022140 PF04304 Protein of unknown function (DUF454) KAM339_022150 PF01207 Dihydrouridine synthase (Dus) KAM339_022170 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KAM339_022170 PF12833 Helix-turn-helix domain KAM339_022170 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAM339_022170 PF02805 Metal binding domain of Ada KAM339_022180 PF00892 EamA-like transporter family KAM339_022200 PF01612 3'-5' exonuclease KAM339_022200 PF00570 HRDC domain KAM339_022210 PF00501 AMP-binding enzyme KAM339_022210 PF13193 AMP-binding enzyme C-terminal domain KAM339_022220 PF00561 alpha/beta hydrolase fold KAM339_022240 PF00814 Glycoprotease family KAM339_022250 PF04851 Type III restriction enzyme, res subunit KAM339_022250 PF13307 Helicase C-terminal domain KAM339_022270 PF08029 HisG, C-terminal domain KAM339_022270 PF01634 ATP phosphoribosyltransferase KAM339_022280 PF00815 Histidinol dehydrogenase KAM339_022290 PF00155 Aminotransferase class I and II KAM339_022300 PF00475 Imidazoleglycerol-phosphate dehydratase KAM339_022300 PF08645 Polynucleotide kinase 3 phosphatase KAM339_022310 PF00117 Glutamine amidotransferase class-I KAM339_022320 PF00977 Histidine biosynthesis protein KAM339_022330 PF00072 Response regulator receiver domain KAM339_022340 PF00990 Diguanylate cyclase, GGDEF domain KAM339_022340 PF08448 PAS fold KAM339_022350 PF00072 Response regulator receiver domain KAM339_022350 PF00512 His Kinase A (phospho-acceptor) domain KAM339_022350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_022350 PF01627 Hpt domain KAM339_022360 PF00977 Histidine biosynthesis protein KAM339_022370 PF01502 Phosphoribosyl-AMP cyclohydrolase KAM339_022370 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KAM339_022390 PF08279 HTH domain KAM339_022390 PF13280 WYL domain KAM339_022400 PF13193 AMP-binding enzyme C-terminal domain KAM339_022400 PF00501 AMP-binding enzyme KAM339_022410 PF05433 Glycine zipper 2TM domain KAM339_022440 PF01032 FecCD transport family KAM339_022450 PF00005 ABC transporter KAM339_022460 PF07690 Major Facilitator Superfamily KAM339_022500 PF07152 YaeQ protein KAM339_022520 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAM339_022520 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAM339_022520 PF00378 Enoyl-CoA hydratase/isomerase KAM339_022530 PF00108 Thiolase, N-terminal domain KAM339_022530 PF02803 Thiolase, C-terminal domain KAM339_022540 PF07726 ATPase family associated with various cellular activities (AAA) KAM339_022540 PF17863 AAA lid domain KAM339_022550 PF01882 Protein of unknown function DUF58 KAM339_022600 PF04542 Sigma-70 region 2 KAM339_022600 PF08281 Sigma-70, region 4 KAM339_022620 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KAM339_022630 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KAM339_022640 PF00563 EAL domain KAM339_022640 PF08668 HDOD domain KAM339_022650 PF02803 Thiolase, C-terminal domain KAM339_022650 PF00108 Thiolase, N-terminal domain KAM339_022660 PF00376 MerR family regulatory protein KAM339_022660 PF09278 MerR, DNA binding KAM339_022670 PF00375 Sodium:dicarboxylate symporter family KAM339_022680 PF06865 Pyrimidine/purine nucleoside phosphorylase KAM339_022690 PF03313 Serine dehydratase alpha chain KAM339_022690 PF03315 Serine dehydratase beta chain KAM339_022700 PF03313 Serine dehydratase alpha chain KAM339_022700 PF03315 Serine dehydratase beta chain KAM339_022710 PF13406 Transglycosylase SLT domain KAM339_022720 PF05166 YcgL domain KAM339_022730 PF05209 Septum formation inhibitor MinC, N-terminal domain KAM339_022730 PF03775 Septum formation inhibitor MinC, C-terminal domain KAM339_022740 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KAM339_022750 PF03776 Septum formation topological specificity factor MinE KAM339_022760 PF04269 Protein of unknown function, DUF440 KAM339_022770 PF00912 Transglycosylase KAM339_022780 PF04269 Protein of unknown function, DUF440 KAM339_022800 PF17783 CvfB-like winged helix domain KAM339_022800 PF13509 S1 domain KAM339_022850 PF02525 Flavodoxin-like fold KAM339_022860 PF00892 EamA-like transporter family KAM339_022870 PF01370 NAD dependent epimerase/dehydratase family KAM339_022870 PF02222 ATP-grasp domain KAM339_022880 PF13419 Haloacid dehalogenase-like hydrolase KAM339_022910 PF01695 IstB-like ATP binding protein KAM339_022920 PF00665 Integrase core domain KAM339_023020 PF01527 Transposase KAM339_023060 PF00665 Integrase core domain KAM339_023070 PF01695 IstB-like ATP binding protein KAM339_023100 PF02796 Helix-turn-helix domain of resolvase KAM339_023100 PF00239 Resolvase, N terminal domain KAM339_023150 PF00677 Lumazine binding domain KAM339_023160 PF06786 Uncharacterised protein family (UPF0253) KAM339_023170 PF01554 MatE KAM339_023180 PF00136 DNA polymerase family B KAM339_023180 PF03104 DNA polymerase family B, exonuclease domain KAM339_023190 PF05726 Pirin C-terminal cupin domain KAM339_023190 PF02678 Pirin KAM339_023210 PF03279 Bacterial lipid A biosynthesis acyltransferase KAM339_023220 PF03279 Bacterial lipid A biosynthesis acyltransferase KAM339_023240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_023240 PF03466 LysR substrate binding domain KAM339_023250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KAM339_023250 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KAM339_023260 PF01261 Xylose isomerase-like TIM barrel KAM339_023270 PF00990 Diguanylate cyclase, GGDEF domain KAM339_023280 PF00933 Glycosyl hydrolase family 3 N terminal domain KAM339_023300 PF03466 LysR substrate binding domain KAM339_023300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_023320 PF00232 Glycosyl hydrolase family 1 KAM339_023330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_023330 PF03466 LysR substrate binding domain KAM339_023340 PF00990 Diguanylate cyclase, GGDEF domain KAM339_023340 PF00072 Response regulator receiver domain KAM339_023350 PF00384 Molybdopterin oxidoreductase KAM339_023360 PF02634 FdhD/NarQ family KAM339_023390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_023390 PF03466 LysR substrate binding domain KAM339_023400 PF13407 Periplasmic binding protein domain KAM339_023410 PF00005 ABC transporter KAM339_023420 PF02653 Branched-chain amino acid transport system / permease component KAM339_023430 PF02653 Branched-chain amino acid transport system / permease component KAM339_023440 PF12706 Beta-lactamase superfamily domain KAM339_023450 PF10711 Hypothetical protein (DUF2513) KAM339_023630 PF02796 Helix-turn-helix domain of resolvase KAM339_023630 PF00239 Resolvase, N terminal domain KAM339_023640 PF07517 SecA DEAD-like domain KAM339_023640 PF01043 SecA preprotein cross-linking domain KAM339_023640 PF07516 SecA Wing and Scaffold domain KAM339_023640 PF02810 SEC-C motif KAM339_023660 PF01925 Sulfite exporter TauE/SafE KAM339_023670 PF13520 Amino acid permease KAM339_023690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KAM339_023690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KAM339_023700 PF00378 Enoyl-CoA hydratase/isomerase KAM339_023710 PF00378 Enoyl-CoA hydratase/isomerase KAM339_023720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAM339_023720 PF02770 Acyl-CoA dehydrogenase, middle domain KAM339_023720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAM339_023730 PF00171 Aldehyde dehydrogenase family KAM339_023740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAM339_023740 PF02770 Acyl-CoA dehydrogenase, middle domain KAM339_023740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAM339_023750 PF01039 Carboxyl transferase domain KAM339_023760 PF00378 Enoyl-CoA hydratase/isomerase KAM339_023770 PF02785 Biotin carboxylase C-terminal domain KAM339_023770 PF00289 Biotin carboxylase, N-terminal domain KAM339_023770 PF00364 Biotin-requiring enzyme KAM339_023770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAM339_023780 PF00682 HMGL-like KAM339_023790 PF00376 MerR family regulatory protein KAM339_023790 PF09278 MerR, DNA binding KAM339_023810 PF01184 GPR1/FUN34/yaaH family KAM339_023820 PF06167 Glucose-regulated metallo-peptidase M90 KAM339_023840 PF01235 Sodium:alanine symporter family KAM339_023850 PF00378 Enoyl-CoA hydratase/isomerase KAM339_023880 PF04341 Protein of unknown function, DUF485 KAM339_023890 PF00474 Sodium:solute symporter family KAM339_023900 PF00005 ABC transporter KAM339_023900 PF12848 ABC transporter KAM339_023920 PF13145 PPIC-type PPIASE domain KAM339_023930 PF00216 Bacterial DNA-binding protein KAM339_023940 PF05362 Lon protease (S16) C-terminal proteolytic domain KAM339_023940 PF00004 ATPase family associated with various cellular activities (AAA) KAM339_023940 PF02190 ATP-dependent protease La (LON) substrate-binding domain KAM339_023950 PF10431 C-terminal, D2-small domain, of ClpB protein KAM339_023950 PF07724 AAA domain (Cdc48 subfamily) KAM339_023950 PF06689 ClpX C4-type zinc finger KAM339_023960 PF00574 Clp protease KAM339_023970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KAM339_023970 PF05698 Bacterial trigger factor protein (TF) C-terminus KAM339_023970 PF05697 Bacterial trigger factor protein (TF) KAM339_024010 PF02687 FtsX-like permease family KAM339_024010 PF12704 MacB-like periplasmic core domain KAM339_024020 PF00005 ABC transporter KAM339_024030 PF02687 FtsX-like permease family KAM339_024030 PF12704 MacB-like periplasmic core domain KAM339_024060 PF17757 UvrB interaction domain KAM339_024060 PF00270 DEAD/DEAH box helicase KAM339_024060 PF03461 TRCF domain KAM339_024060 PF00271 Helicase conserved C-terminal domain KAM339_024060 PF02559 CarD-like/TRCF domain KAM339_024070 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KAM339_024080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAM339_024090 PF00892 EamA-like transporter family KAM339_024110 PF00300 Histidine phosphatase superfamily (branch 1) KAM339_024120 PF16187 Middle or third domain of peptidase_M16 KAM339_024120 PF05193 Peptidase M16 inactive domain KAM339_024120 PF00675 Insulinase (Peptidase family M16) KAM339_024130 PF05724 Thiopurine S-methyltransferase (TPMT) KAM339_024150 PF01047 MarR family KAM339_024190 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KAM339_024190 PF02805 Metal binding domain of Ada KAM339_024190 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KAM339_024190 PF12833 Helix-turn-helix domain KAM339_024200 PF05598 Transposase domain (DUF772) KAM339_024200 PF01609 Transposase DDE domain KAM339_024230 PF00117 Glutamine amidotransferase class-I KAM339_024230 PF00958 GMP synthase C terminal domain KAM339_024230 PF02540 NAD synthase KAM339_024240 PF00571 CBS domain KAM339_024240 PF00478 IMP dehydrogenase / GMP reductase domain KAM339_024260 PF00128 Alpha amylase, catalytic domain KAM339_024260 PF03423 Carbohydrate binding domain (family 25) KAM339_024260 PF01373 Glycosyl hydrolase family 14 KAM339_024280 PF01618 MotA/TolQ/ExbB proton channel family KAM339_024290 PF02472 Biopolymer transport protein ExbD/TolR KAM339_024310 PF02601 Exonuclease VII, large subunit KAM339_024310 PF13742 OB-fold nucleic acid binding domain KAM339_024320 PF04055 Radical SAM superfamily KAM339_024330 PF00691 OmpA family KAM339_024340 PF00563 EAL domain KAM339_024340 PF00990 Diguanylate cyclase, GGDEF domain KAM339_024340 PF03707 Bacterial signalling protein N terminal repeat KAM339_024350 PF13689 YfiR/HmsC-like KAM339_024360 PF18024 Helix-turn-helix domain KAM339_024360 PF00158 Sigma-54 interaction domain KAM339_024370 PF01329 Pterin 4 alpha carbinolamine dehydratase KAM339_024380 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KAM339_024390 PF05128 Domain of unknown function (DUF697) KAM339_024400 PF04317 YcjX-like family, DUF463 KAM339_024420 PF06667 Phage shock protein B KAM339_024430 PF04012 PspA/IM30 family KAM339_024440 PF00158 Sigma-54 interaction domain KAM339_024440 PF02954 Bacterial regulatory protein, Fis family KAM339_024460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAM339_024470 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_024480 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_024480 PF12911 N-terminal TM domain of oligopeptide transport permease C KAM339_024490 PF00005 ABC transporter KAM339_024490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAM339_024500 PF00005 ABC transporter KAM339_024510 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KAM339_024520 PF00356 Bacterial regulatory proteins, lacI family KAM339_024530 PF02378 Phosphotransferase system, EIIC KAM339_024530 PF00367 phosphotransferase system, EIIB KAM339_024540 PF00232 Glycosyl hydrolase family 1 KAM339_024550 PF00156 Phosphoribosyl transferase domain KAM339_024560 PF02674 Colicin V production protein KAM339_024570 PF02403 Seryl-tRNA synthetase N-terminal domain KAM339_024570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KAM339_024580 PF12002 MgsA AAA+ ATPase C terminal KAM339_024580 PF00004 ATPase family associated with various cellular activities (AAA) KAM339_024580 PF16193 AAA C-terminal domain KAM339_024590 PF03548 Outer membrane lipoprotein carrier protein LolA KAM339_024600 PF17854 FtsK alpha domain KAM339_024600 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KAM339_024600 PF01580 FtsK/SpoIIIE family KAM339_024600 PF09397 Ftsk gamma domain KAM339_024610 PF01037 Lrp/AsnC ligand binding domain KAM339_024620 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KAM339_024620 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KAM339_024640 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAM339_024650 PF05230 MASE2 domain KAM339_024650 PF00990 Diguanylate cyclase, GGDEF domain KAM339_024660 PF05433 Glycine zipper 2TM domain KAM339_024670 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KAM339_024680 PF04376 Arginine-tRNA-protein transferase, N terminus KAM339_024680 PF04377 Arginine-tRNA-protein transferase, C terminus KAM339_024690 PF01176 Translation initiation factor 1A / IF-1 KAM339_024700 PF00004 ATPase family associated with various cellular activities (AAA) KAM339_024700 PF07724 AAA domain (Cdc48 subfamily) KAM339_024700 PF17871 AAA lid domain KAM339_024700 PF02861 Clp amino terminal domain, pathogenicity island component KAM339_024700 PF10431 C-terminal, D2-small domain, of ClpB protein KAM339_024710 PF02617 ATP-dependent Clp protease adaptor protein ClpS KAM339_024720 PF00313 'Cold-shock' DNA-binding domain KAM339_024730 PF02774 Semialdehyde dehydrogenase, dimerisation domain KAM339_024730 PF01118 Semialdehyde dehydrogenase, NAD binding domain KAM339_024740 PF00893 Small Multidrug Resistance protein KAM339_024760 PF18381 YcaO cyclodehydratase C-terminal domain KAM339_024760 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding KAM339_024770 PF01226 Formate/nitrite transporter KAM339_024780 PF01228 Glycine radical KAM339_024780 PF02901 Pyruvate formate lyase-like KAM339_024790 PF03692 Putative zinc- or iron-chelating domain KAM339_024830 PF00665 Integrase core domain KAM339_024840 PF01695 IstB-like ATP binding protein KAM339_024860 PF03692 Putative zinc- or iron-chelating domain KAM339_024890 PF02629 CoA binding domain KAM339_024890 PF00549 CoA-ligase KAM339_024900 PF08442 ATP-grasp domain KAM339_024900 PF00549 CoA-ligase KAM339_024910 PF02817 e3 binding domain KAM339_024910 PF00364 Biotin-requiring enzyme KAM339_024910 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KAM339_024920 PF16078 2-oxoglutarate dehydrogenase N-terminus KAM339_024920 PF00676 Dehydrogenase E1 component KAM339_024920 PF16870 2-oxoglutarate dehydrogenase C-terminal KAM339_024920 PF02779 Transketolase, pyrimidine binding domain KAM339_024930 PF13085 2Fe-2S iron-sulfur cluster binding domain KAM339_024940 PF02910 Fumarate reductase flavoprotein C-term KAM339_024940 PF00890 FAD binding domain KAM339_024950 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KAM339_024960 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KAM339_024970 PF00285 Citrate synthase, C-terminal domain KAM339_025000 PF00109 Beta-ketoacyl synthase, N-terminal domain KAM339_025000 PF02801 Beta-ketoacyl synthase, C-terminal domain KAM339_025010 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KAM339_025010 PF01266 FAD dependent oxidoreductase KAM339_025030 PF03606 C4-dicarboxylate anaerobic carrier KAM339_025060 PF01863 Protein of unknown function DUF45 KAM339_025090 PF01197 Ribosomal protein L31 KAM339_025100 PF02311 AraC-like ligand binding domain KAM339_025100 PF12833 Helix-turn-helix domain KAM339_025110 PF02653 Branched-chain amino acid transport system / permease component KAM339_025120 PF00005 ABC transporter KAM339_025130 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KAM339_025140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KAM339_025150 PF00596 Class II Aldolase and Adducin N-terminal domain KAM339_025160 PF11762 L-arabinose isomerase C-terminal domain KAM339_025160 PF02610 L-arabinose isomerase KAM339_025190 PF12344 Ultra-violet resistance protein B KAM339_025190 PF00271 Helicase conserved C-terminal domain KAM339_025190 PF04851 Type III restriction enzyme, res subunit KAM339_025190 PF02151 UvrB/uvrC motif KAM339_025190 PF17757 UvrB interaction domain KAM339_025200 PF09382 RQC domain KAM339_025200 PF00570 HRDC domain KAM339_025200 PF16124 RecQ zinc-binding KAM339_025200 PF00270 DEAD/DEAH box helicase KAM339_025200 PF00271 Helicase conserved C-terminal domain KAM339_025210 PF03466 LysR substrate binding domain KAM339_025210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_025220 PF00155 Aminotransferase class I and II KAM339_025230 PF00795 Carbon-nitrogen hydrolase KAM339_025240 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAM339_025260 PF09924 Uncharacterised conserved protein (DUF2156) KAM339_025260 PF03706 Lysylphosphatidylglycerol synthase TM region KAM339_025270 PF00149 Calcineurin-like phosphoesterase KAM339_025290 PF00224 Pyruvate kinase, barrel domain KAM339_025290 PF02887 Pyruvate kinase, alpha/beta domain KAM339_025300 PF07745 Glycosyl hydrolase family 53 KAM339_025310 PF00367 phosphotransferase system, EIIB KAM339_025310 PF02378 Phosphotransferase system, EIIC KAM339_025320 PF08533 Beta-galactosidase C-terminal domain KAM339_025320 PF02449 Beta-galactosidase KAM339_025320 PF08532 Beta-galactosidase trimerisation domain KAM339_025330 PF07745 Glycosyl hydrolase family 53 KAM339_025340 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_025350 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_025360 PF13416 Bacterial extracellular solute-binding protein KAM339_025370 PF17912 MalK OB fold domain KAM339_025370 PF00005 ABC transporter KAM339_025380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_025380 PF00672 HAMP domain KAM339_025400 PF07745 Glycosyl hydrolase family 53 KAM339_025410 PF02264 LamB porin KAM339_025420 PF00356 Bacterial regulatory proteins, lacI family KAM339_025430 PF16363 GDP-mannose 4,6 dehydratase KAM339_025440 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KAM339_025440 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KAM339_025450 PF01695 IstB-like ATP binding protein KAM339_025460 PF00665 Integrase core domain KAM339_025470 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KAM339_025470 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KAM339_025480 PF08544 GHMP kinases C terminal KAM339_025480 PF10509 Galactokinase galactose-binding signature KAM339_025480 PF00288 GHMP kinases N terminal domain KAM339_025530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAM339_025560 PF01609 Transposase DDE domain KAM339_025560 PF05598 Transposase domain (DUF772) KAM339_025570 PF01609 Transposase DDE domain KAM339_025570 PF05598 Transposase domain (DUF772) KAM339_025580 PF01609 Transposase DDE domain KAM339_025580 PF05598 Transposase domain (DUF772) KAM339_025660 PF04984 Phage tail sheath protein subtilisin-like domain KAM339_025660 PF17482 Phage tail sheath C-terminal domain KAM339_025680 PF07484 Phage Tail Collar Domain KAM339_025880 PF05866 Endodeoxyribonuclease RusA KAM339_026040 PF05154 TM2 domain KAM339_026150 PF00436 Single-strand binding protein family KAM339_026180 PF00589 Phage integrase family KAM339_026180 PF14659 Phage integrase, N-terminal SAM-like domain KAM339_026180 PF13356 Arm DNA-binding domain KAM339_026190 PF00929 Exonuclease KAM339_026190 PF08411 Exonuclease C-terminal KAM339_026220 PF03788 LrgA family KAM339_026230 PF04172 LrgB-like family KAM339_026240 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KAM339_026240 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region KAM339_026250 PF00501 AMP-binding enzyme KAM339_026260 PF08891 YfcL protein KAM339_026280 PF03741 Integral membrane protein TerC family KAM339_026290 PF00793 DAHP synthetase I family KAM339_026300 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KAM339_026310 PF00266 Aminotransferase class-V KAM339_026320 PF01012 Electron transfer flavoprotein domain KAM339_026320 PF00766 Electron transfer flavoprotein FAD-binding domain KAM339_026330 PF01012 Electron transfer flavoprotein domain KAM339_026350 PF01544 CorA-like Mg2+ transporter protein KAM339_026360 PF11143 Protein of unknown function (DUF2919) KAM339_026390 PF00593 TonB dependent receptor KAM339_026390 PF07715 TonB-dependent Receptor Plug Domain KAM339_026400 PF01032 FecCD transport family KAM339_026410 PF01032 FecCD transport family KAM339_026420 PF00005 ABC transporter KAM339_026430 PF17837 4'-phosphopantetheinyl transferase N-terminal domain KAM339_026430 PF01648 4'-phosphopantetheinyl transferase superfamily KAM339_026440 PF01497 Periplasmic binding protein KAM339_026450 PF00501 AMP-binding enzyme KAM339_026450 PF13193 AMP-binding enzyme C-terminal domain KAM339_026450 PF00668 Condensation domain KAM339_026450 PF00550 Phosphopantetheine attachment site KAM339_026450 PF00975 Thioesterase domain KAM339_026460 PF00550 Phosphopantetheine attachment site KAM339_026460 PF13193 AMP-binding enzyme C-terminal domain KAM339_026460 PF07993 Male sterility protein KAM339_026460 PF00668 Condensation domain KAM339_026460 PF00501 AMP-binding enzyme KAM339_026480 PF00550 Phosphopantetheine attachment site KAM339_026480 PF00975 Thioesterase domain KAM339_026480 PF00668 Condensation domain KAM339_026480 PF13193 AMP-binding enzyme C-terminal domain KAM339_026480 PF00501 AMP-binding enzyme KAM339_026490 PF00550 Phosphopantetheine attachment site KAM339_026490 PF00857 Isochorismatase family KAM339_026500 PF13193 AMP-binding enzyme C-terminal domain KAM339_026500 PF00501 AMP-binding enzyme KAM339_026510 PF00425 chorismate binding enzyme KAM339_026520 PF07273 Protein of unknown function (DUF1439) KAM339_026540 PF00483 Nucleotidyl transferase KAM339_026550 PF03707 Bacterial signalling protein N terminal repeat KAM339_026550 PF00990 Diguanylate cyclase, GGDEF domain KAM339_026550 PF00563 EAL domain KAM339_026580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_026580 PF17200 Single Cache domain 2 KAM339_026580 PF00672 HAMP domain KAM339_026590 PF00294 pfkB family carbohydrate kinase KAM339_026600 PF01124 MAPEG family KAM339_026610 PF00762 Ferrochelatase KAM339_026620 PF05191 Adenylate kinase, active site lid KAM339_026630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_026630 PF00183 Hsp90 protein KAM339_026650 PF02132 RecR protein KAM339_026650 PF13662 Toprim domain KAM339_026660 PF00708 Acylphosphatase KAM339_026660 PF17788 HypF Kae1-like domain KAM339_026660 PF01300 Telomere recombination KAM339_026660 PF07503 HypF finger KAM339_026670 PF01455 HupF/HypC family KAM339_026680 PF01924 Hydrogenase formation hypA family KAM339_026690 PF02769 AIR synthase related protein, C-terminal domain KAM339_026690 PF00586 AIR synthase related protein, N-terminal domain KAM339_026700 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA KAM339_026720 PF02492 CobW/HypB/UreG, nucleotide-binding domain KAM339_026730 PF08402 TOBE domain KAM339_026730 PF00005 ABC transporter KAM339_026740 PF00005 ABC transporter KAM339_026750 PF12911 N-terminal TM domain of oligopeptide transport permease C KAM339_026750 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_026760 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_026770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAM339_026780 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE KAM339_026790 PF01750 Hydrogenase maturation protease KAM339_026800 PF01750 Hydrogenase maturation protease KAM339_026810 PF00374 Nickel-dependent hydrogenase KAM339_026820 PF03916 Polysulphide reductase, NrfD KAM339_026830 PF13247 4Fe-4S dicluster domain KAM339_026840 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal KAM339_026840 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KAM339_026850 PF01168 Alanine racemase, N-terminal domain KAM339_026850 PF00842 Alanine racemase, C-terminal domain KAM339_026910 PF02899 Phage integrase, N-terminal SAM-like domain KAM339_026910 PF00589 Phage integrase family KAM339_026930 PF00916 Sulfate permease family KAM339_026930 PF01740 STAS domain KAM339_026950 PF14403 Circularly permuted ATP-grasp type 2 KAM339_026960 PF14403 Circularly permuted ATP-grasp type 2 KAM339_026960 PF04168 A predicted alpha-helical domain with a conserved ER motif. KAM339_027020 PF03239 Iron permease FTR1 family KAM339_027030 PF01593 Flavin containing amine oxidoreductase KAM339_027070 PF07690 Major Facilitator Superfamily KAM339_027090 PF03600 Citrate transporter KAM339_027110 PF00005 ABC transporter KAM339_027120 PF02687 FtsX-like permease family KAM339_027120 PF12704 MacB-like periplasmic core domain KAM339_027160 PF02913 FAD linked oxidases, C-terminal domain KAM339_027160 PF01565 FAD binding domain KAM339_027170 PF02589 LUD domain KAM339_027180 PF13183 4Fe-4S dicluster domain KAM339_027180 PF11870 Domain of unknown function (DUF3390) KAM339_027180 PF02589 LUD domain KAM339_027190 PF02754 Cysteine-rich domain KAM339_027200 PF02652 L-lactate permease KAM339_027210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_027210 PF03466 LysR substrate binding domain KAM339_027260 PF01625 Peptide methionine sulfoxide reductase KAM339_027270 PF00583 Acetyltransferase (GNAT) family KAM339_027270 PF00696 Amino acid kinase family KAM339_027280 PF01842 ACT domain KAM339_027280 PF00696 Amino acid kinase family KAM339_027300 PF00884 Sulfatase KAM339_027310 PF01906 Putative heavy-metal-binding KAM339_027340 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAM339_027350 PF05728 Uncharacterised protein family (UPF0227) KAM339_027360 PF08439 Oligopeptidase F KAM339_027360 PF01432 Peptidase family M3 KAM339_027370 PF01432 Peptidase family M3 KAM339_027370 PF08439 Oligopeptidase F KAM339_027380 PF05661 Protein of unknown function (DUF808) KAM339_027400 PF13426 PAS domain KAM339_027400 PF08447 PAS fold KAM339_027400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_027410 PF07549 SecD/SecF GG Motif KAM339_027410 PF02355 Protein export membrane protein KAM339_027420 PF07549 SecD/SecF GG Motif KAM339_027420 PF13721 SecD export protein N-terminal TM region KAM339_027420 PF02355 Protein export membrane protein KAM339_027490 PF01230 HIT domain KAM339_027500 PF00672 HAMP domain KAM339_027500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_027520 PF01979 Amidohydrolase family KAM339_027550 PF00375 Sodium:dicarboxylate symporter family KAM339_027570 PF00842 Alanine racemase, C-terminal domain KAM339_027570 PF01168 Alanine racemase, N-terminal domain KAM339_027580 PF03741 Integral membrane protein TerC family KAM339_027590 PF00005 ABC transporter KAM339_027590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAM339_027600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAM339_027600 PF00005 ABC transporter KAM339_027610 PF12911 N-terminal TM domain of oligopeptide transport permease C KAM339_027610 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_027620 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_027630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAM339_027640 PF01914 MarC family integral membrane protein KAM339_027650 PF00465 Iron-containing alcohol dehydrogenase KAM339_027650 PF00171 Aldehyde dehydrogenase family KAM339_027660 PF00072 Response regulator receiver domain KAM339_027670 PF06580 Histidine kinase KAM339_027670 PF07694 5TMR of 5TMR-LYT KAM339_027680 PF00072 Response regulator receiver domain KAM339_027680 PF04397 LytTr DNA-binding domain KAM339_027690 PF02554 Carbon starvation protein CstA KAM339_027700 PF00924 Mechanosensitive ion channel KAM339_027700 PF12795 Mechanosensitive ion channel porin domain KAM339_027700 PF12794 Mechanosensitive ion channel inner membrane domain 1 KAM339_027710 PF11742 Protein of unknown function (DUF3302) KAM339_027720 PF00529 HlyD membrane-fusion protein of T1SS KAM339_027720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAM339_027730 PF04851 Type III restriction enzyme, res subunit KAM339_027730 PF00271 Helicase conserved C-terminal domain KAM339_027740 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family KAM339_027750 PF00462 Glutaredoxin KAM339_027770 PF00155 Aminotransferase class I and II KAM339_027780 PF03606 C4-dicarboxylate anaerobic carrier KAM339_027790 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KAM339_027790 PF07055 Enoyl reductase FAD binding domain KAM339_027790 PF12241 Trans-2-enoyl-CoA reductase catalytic region KAM339_027810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_027810 PF08447 PAS fold KAM339_027810 PF13426 PAS domain KAM339_027830 PF00892 EamA-like transporter family KAM339_027840 PF02508 Rnf-Nqr subunit, membrane protein KAM339_027850 PF04060 Putative Fe-S cluster KAM339_027860 PF10531 SLBB domain KAM339_027860 PF13375 RnfC Barrel sandwich hybrid domain KAM339_027860 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KAM339_027860 PF12838 4Fe-4S dicluster domain KAM339_027870 PF03116 NQR2, RnfD, RnfE family KAM339_027880 PF04205 FMN-binding domain KAM339_027890 PF02508 Rnf-Nqr subunit, membrane protein KAM339_027900 PF10576 Iron-sulfur binding domain of endonuclease III KAM339_027900 PF00730 HhH-GPD superfamily base excision DNA repair protein KAM339_027900 PF00633 Helix-hairpin-helix motif KAM339_027910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAM339_027920 PF12729 Four helix bundle sensory module for signal transduction KAM339_027920 PF00672 HAMP domain KAM339_027920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_027930 PF02535 ZIP Zinc transporter KAM339_027950 PF01048 Phosphorylase superfamily KAM339_027970 PF01497 Periplasmic binding protein KAM339_027980 PF02719 Polysaccharide biosynthesis protein KAM339_027990 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KAM339_028010 PF08666 SAF domain KAM339_028010 PF03102 NeuB family KAM339_028020 PF02350 UDP-N-acetylglucosamine 2-epimerase KAM339_028040 PF08241 Methyltransferase domain KAM339_028050 PF00483 Nucleotidyl transferase KAM339_028060 PF02348 Cytidylyltransferase KAM339_028090 PF02561 Flagellar protein FliS KAM339_028100 PF07196 Flagellin hook IN motif KAM339_028100 PF07195 Flagellar hook-associated protein 2 C-terminus KAM339_028100 PF02465 Flagellar hook-associated protein 2 N-terminus KAM339_028120 PF07196 Flagellin hook IN motif KAM339_028120 PF00700 Bacterial flagellin C-terminal helical region KAM339_028120 PF00669 Bacterial flagellin N-terminal helical region KAM339_028130 PF01527 Transposase KAM339_028140 PF13737 Transposase DDE domain KAM339_028150 PF13737 Transposase DDE domain KAM339_028160 PF00669 Bacterial flagellin N-terminal helical region KAM339_028160 PF07196 Flagellin hook IN motif KAM339_028160 PF07196 Flagellin hook IN motif KAM339_028160 PF00700 Bacterial flagellin C-terminal helical region KAM339_028160 PF00700 Bacterial flagellin C-terminal helical region KAM339_028160 PF00669 Bacterial flagellin N-terminal helical region KAM339_028170 PF03458 UPF0126 domain KAM339_028190 PF02926 THUMP domain KAM339_028190 PF02568 Thiamine biosynthesis protein (ThiI) KAM339_028210 PF06832 Penicillin-Binding Protein C-terminus Family KAM339_028210 PF00912 Transglycosylase KAM339_028210 PF00905 Penicillin binding protein transpeptidase domain KAM339_028220 PF01835 MG2 domain KAM339_028220 PF07678 A-macroglobulin TED domain KAM339_028220 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain KAM339_028220 PF11974 Bacterial alpha-2-macroglobulin MG3 domain KAM339_028220 PF00207 Alpha-2-macroglobulin family KAM339_028220 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain KAM339_028220 PF07703 Alpha-2-macroglobulin bait region domain KAM339_028220 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain KAM339_028220 PF17962 Bacterial macroglobulin domain 6 KAM339_028230 PF01594 AI-2E family transporter KAM339_028240 PF02321 Outer membrane efflux protein KAM339_028250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAM339_028250 PF00529 HlyD membrane-fusion protein of T1SS KAM339_028280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAM339_028280 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAM339_028290 PF00563 EAL domain KAM339_028290 PF00990 Diguanylate cyclase, GGDEF domain KAM339_028290 PF03707 Bacterial signalling protein N terminal repeat KAM339_028300 PF04055 Radical SAM superfamily KAM339_028320 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_028330 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_028340 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAM339_028350 PF00005 ABC transporter KAM339_028360 PF03956 Lysine exporter LysO KAM339_028370 PF01979 Amidohydrolase family KAM339_028380 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAM339_028400 PF04336 Acyl carrier protein phosphodiesterase KAM339_028430 PF03960 ArsC family KAM339_028440 PF00578 AhpC/TSA family KAM339_028450 PF01435 Peptidase family M48 KAM339_028450 PF13181 Tetratricopeptide repeat KAM339_028460 PF01206 Sulfurtransferase TusA KAM339_028470 PF01594 AI-2E family transporter KAM339_028490 PF00561 alpha/beta hydrolase fold KAM339_028500 PF03976 Polyphosphate kinase 2 (PPK2) KAM339_028510 PF00005 ABC transporter KAM339_028510 PF08402 TOBE domain KAM339_028520 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_028530 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_028530 PF14785 Maltose transport system permease protein MalF P2 domain KAM339_028540 PF01547 Bacterial extracellular solute-binding protein KAM339_028550 PF04245 37-kD nucleoid-associated bacterial protein KAM339_028560 PF07208 Protein of unknown function (DUF1414) KAM339_028570 PF11893 Domain of unknown function (DUF3413) KAM339_028570 PF00884 Sulfatase KAM339_028580 PF07715 TonB-dependent Receptor Plug Domain KAM339_028580 PF00593 TonB dependent receptor KAM339_028590 PF00326 Prolyl oligopeptidase family KAM339_028590 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KAM339_028630 PF03974 Ecotin KAM339_028640 PF04219 Protein of unknown function, DUF KAM339_028650 PF03466 LysR substrate binding domain KAM339_028650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_028660 PF01817 Chorismate mutase type II KAM339_028660 PF02153 Prephenate dehydrogenase KAM339_028670 PF00793 DAHP synthetase I family KAM339_028680 PF03009 Glycerophosphoryl diester phosphodiesterase family KAM339_028690 PF01266 FAD dependent oxidoreductase KAM339_028690 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KAM339_028700 PF00455 DeoR C terminal sensor domain KAM339_028700 PF08220 DeoR-like helix-turn-helix domain KAM339_028710 PF07690 Major Facilitator Superfamily KAM339_028720 PF00230 Major intrinsic protein KAM339_028730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KAM339_028730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KAM339_028740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_028740 PF03466 LysR substrate binding domain KAM339_028780 PF00248 Aldo/keto reductase family KAM339_028790 PF07690 Major Facilitator Superfamily KAM339_028800 PF02322 Cytochrome bd terminal oxidase subunit II KAM339_028810 PF01654 Cytochrome bd terminal oxidase subunit I KAM339_028820 PF00155 Aminotransferase class I and II KAM339_028820 PF00392 Bacterial regulatory proteins, gntR family KAM339_028840 PF04391 Protein of unknown function (DUF533) KAM339_028860 PF10689 Protein of unknown function (DUF2496) KAM339_028880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_028880 PF03466 LysR substrate binding domain KAM339_028900 PF07690 Major Facilitator Superfamily KAM339_028910 PF00849 RNA pseudouridylate synthase KAM339_028910 PF01479 S4 domain KAM339_028920 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KAM339_028920 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KAM339_028960 PF00271 Helicase conserved C-terminal domain KAM339_028960 PF04851 Type III restriction enzyme, res subunit KAM339_028970 PF00300 Histidine phosphatase superfamily (branch 1) KAM339_028980 PF00563 EAL domain KAM339_028980 PF03707 Bacterial signalling protein N terminal repeat KAM339_028980 PF00990 Diguanylate cyclase, GGDEF domain KAM339_029010 PF17944 Arginine decarboxylase C-terminal helical extension KAM339_029010 PF17810 Arginine decarboxylase helical bundle domain KAM339_029010 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KAM339_029020 PF01546 Peptidase family M20/M25/M40 KAM339_029020 PF07687 Peptidase dimerisation domain KAM339_029050 PF05221 S-adenosyl-L-homocysteine hydrolase KAM339_029050 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KAM339_029070 PF04264 YceI-like domain KAM339_029080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_029080 PF03466 LysR substrate binding domain KAM339_029100 PF01268 Formate--tetrahydrofolate ligase KAM339_029110 PF00672 HAMP domain KAM339_029110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_029110 PF17200 Single Cache domain 2 KAM339_029120 PF01227 GTP cyclohydrolase I KAM339_029130 PF03454 MoeA C-terminal region (domain IV) KAM339_029130 PF03453 MoeA N-terminal region (domain I and II) KAM339_029130 PF00994 Probable molybdopterin binding domain KAM339_029140 PF00899 ThiF family KAM339_029150 PF12697 Alpha/beta hydrolase family KAM339_029160 PF00005 ABC transporter KAM339_029160 PF03459 TOBE domain KAM339_029170 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_029190 PF02391 MoaE protein KAM339_029200 PF02597 ThiS family KAM339_029210 PF01967 MoaC family KAM339_029220 PF00994 Probable molybdopterin binding domain KAM339_029230 PF03264 NapC/NirT cytochrome c family, N-terminal region KAM339_029240 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) KAM339_029250 PF13237 4Fe-4S dicluster domain KAM339_029250 PF12801 4Fe-4S binding domain KAM339_029260 PF12838 4Fe-4S dicluster domain KAM339_029260 PF12800 4Fe-4S binding domain KAM339_029270 PF00384 Molybdopterin oxidoreductase KAM339_029270 PF01568 Molydopterin dinucleotide binding domain KAM339_029270 PF10518 TAT (twin-arginine translocation) pathway signal sequence KAM339_029270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAM339_029290 PF12800 4Fe-4S binding domain KAM339_029290 PF13187 4Fe-4S dicluster domain KAM339_029290 PF00037 4Fe-4S binding domain KAM339_029300 PF04055 Radical SAM superfamily KAM339_029300 PF06463 Molybdenum Cofactor Synthesis C KAM339_029310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_029310 PF00672 HAMP domain KAM339_029310 PF07730 Histidine kinase KAM339_029310 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KAM339_029320 PF00196 Bacterial regulatory proteins, luxR family KAM339_029320 PF00072 Response regulator receiver domain KAM339_029350 PF00072 Response regulator receiver domain KAM339_029350 PF09456 RcsC Alpha-Beta-Loop (ABL) KAM339_029350 PF00512 His Kinase A (phospho-acceptor) domain KAM339_029350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_029370 PF01933 Uncharacterised protein family UPF0052 KAM339_029390 PF13230 Glutamine amidotransferases class-II KAM339_029400 PF13580 SIS domain KAM339_029410 PF09317 Domain of unknown function (DUF1974) KAM339_029410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KAM339_029410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KAM339_029410 PF02770 Acyl-CoA dehydrogenase, middle domain KAM339_029420 PF11849 Domain of unknown function (DUF3369) KAM339_029440 PF00929 Exonuclease KAM339_029450 PF00075 RNase H KAM339_029460 PF08241 Methyltransferase domain KAM339_029470 PF00753 Metallo-beta-lactamase superfamily KAM339_029470 PF16123 Hydroxyacylglutathione hydrolase C-terminus KAM339_029480 PF01464 Transglycosylase SLT domain KAM339_029480 PF01476 LysM domain KAM339_029490 PF03372 Endonuclease/Exonuclease/phosphatase family KAM339_029510 PF03061 Thioesterase superfamily KAM339_029530 PF00356 Bacterial regulatory proteins, lacI family KAM339_029540 PF14718 Soluble lytic murein transglycosylase L domain KAM339_029540 PF01464 Transglycosylase SLT domain KAM339_029550 PF00563 EAL domain KAM339_029550 PF00990 Diguanylate cyclase, GGDEF domain KAM339_029550 PF03707 Bacterial signalling protein N terminal repeat KAM339_029560 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KAM339_029580 PF04357 TamB, inner membrane protein subunit of TAM complex KAM339_029590 PF01103 Surface antigen KAM339_029590 PF07244 Surface antigen variable number repeat KAM339_029590 PF17243 POTRA domain TamA domain 1 KAM339_029630 PF02627 Carboxymuconolactone decarboxylase family KAM339_029640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KAM339_029640 PF00403 Heavy-metal-associated domain KAM339_029640 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAM339_029650 PF13416 Bacterial extracellular solute-binding protein KAM339_029670 PF00005 ABC transporter KAM339_029680 PF01066 CDP-alcohol phosphatidyltransferase KAM339_029690 PF13406 Transglycosylase SLT domain KAM339_029700 PF01047 MarR family KAM339_029720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAM339_029720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAM339_029720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAM339_029720 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAM339_029730 PF03925 SeqA protein C-terminal domain KAM339_029730 PF17206 SeqA protein N-terminal domain KAM339_029750 PF12697 Alpha/beta hydrolase family KAM339_029770 PF01402 Ribbon-helix-helix protein, copG family KAM339_029780 PF00258 Flavodoxin KAM339_029800 PF01475 Ferric uptake regulator family KAM339_029810 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KAM339_029810 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAM339_029820 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain KAM339_029820 PF00728 Glycosyl hydrolase family 20, catalytic domain KAM339_029820 PF02838 Glycosyl hydrolase family 20, domain 2 KAM339_029820 PF03173 Putative carbohydrate binding domain KAM339_029830 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KAM339_029830 PF00367 phosphotransferase system, EIIB KAM339_029830 PF02378 Phosphotransferase system, EIIC KAM339_029840 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KAM339_029850 PF01979 Amidohydrolase family KAM339_029860 PF01047 MarR family KAM339_029860 PF00480 ROK family KAM339_029880 PF08019 Phosphoethanolamine transferase EptA/EptB KAM339_029880 PF00884 Sulfatase KAM339_029890 PF01709 Transcriptional regulator KAM339_029900 PF02938 GAD domain KAM339_029900 PF00152 tRNA synthetases class II (D, K and N) KAM339_029900 PF01336 OB-fold nucleic acid binding domain KAM339_029910 PF01904 Protein of unknown function DUF72 KAM339_029920 PF13649 Methyltransferase domain KAM339_029930 PF08003 Protein of unknown function (DUF1698) KAM339_029970 PF03466 LysR substrate binding domain KAM339_029970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_029980 PF00877 NlpC/P60 family KAM339_030000 PF00171 Aldehyde dehydrogenase family KAM339_030010 PF00440 Bacterial regulatory proteins, tetR family KAM339_030010 PF08359 YsiA-like protein, C-terminal region KAM339_030030 PF00465 Iron-containing alcohol dehydrogenase KAM339_030040 PF00291 Pyridoxal-phosphate dependent enzyme KAM339_030080 PF01554 MatE KAM339_030100 PF04325 Protein of unknown function (DUF465) KAM339_030110 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KAM339_030110 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KAM339_030110 PF10371 Domain of unknown function KAM339_030110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAM339_030110 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KAM339_030120 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KAM339_030120 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KAM339_030120 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAM339_030130 PF00111 2Fe-2S iron-sulfur cluster binding domain KAM339_030130 PF03476 MOSC N-terminal beta barrel domain KAM339_030130 PF00111 2Fe-2S iron-sulfur cluster binding domain KAM339_030130 PF03473 MOSC domain KAM339_030130 PF03476 MOSC N-terminal beta barrel domain KAM339_030130 PF03473 MOSC domain KAM339_030140 PF01435 Peptidase family M48 KAM339_030160 PF12697 Alpha/beta hydrolase family KAM339_030160 PF08241 Methyltransferase domain KAM339_030170 PF00155 Aminotransferase class I and II KAM339_030180 PF06968 Biotin and Thiamin Synthesis associated domain KAM339_030180 PF04055 Radical SAM superfamily KAM339_030200 PF00202 Aminotransferase class-III KAM339_030230 PF00152 tRNA synthetases class II (D, K and N) KAM339_030230 PF01336 OB-fold nucleic acid binding domain KAM339_030240 PF03605 Anaerobic c4-dicarboxylate membrane transporter KAM339_030270 PF07687 Peptidase dimerisation domain KAM339_030270 PF01546 Peptidase family M20/M25/M40 KAM339_030280 PF03606 C4-dicarboxylate anaerobic carrier KAM339_030310 PF00239 Resolvase, N terminal domain KAM339_030310 PF02796 Helix-turn-helix domain of resolvase KAM339_030340 PF13408 Recombinase zinc beta ribbon domain KAM339_030340 PF07508 Recombinase KAM339_030340 PF00239 Resolvase, N terminal domain KAM339_030350 PF03960 ArsC family KAM339_030360 PF07687 Peptidase dimerisation domain KAM339_030360 PF01546 Peptidase family M20/M25/M40 KAM339_030370 PF02557 D-alanyl-D-alanine carboxypeptidase KAM339_030390 PF03471 Transporter associated domain KAM339_030390 PF02080 TrkA-C domain KAM339_030390 PF00999 Sodium/hydrogen exchanger family KAM339_030410 PF01810 LysE type translocator KAM339_030420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_030420 PF00672 HAMP domain KAM339_030430 PF07509 Protein of unknown function (DUF1523) KAM339_030470 PF01156 Inosine-uridine preferring nucleoside hydrolase KAM339_030480 PF00849 RNA pseudouridylate synthase KAM339_030490 PF01048 Phosphorylase superfamily KAM339_030500 PF00465 Iron-containing alcohol dehydrogenase KAM339_030510 PF04355 SmpA / OmlA family KAM339_030520 PF13460 NAD(P)H-binding KAM339_030530 PF03658 RnfH family Ubiquitin KAM339_030540 PF03364 Polyketide cyclase / dehydrase and lipid transport KAM339_030550 PF01668 SmpB protein KAM339_030580 PF13508 Acetyltransferase (GNAT) domain KAM339_030620 PF01546 Peptidase family M20/M25/M40 KAM339_030630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_030630 PF03466 LysR substrate binding domain KAM339_030640 PF01243 Pyridoxamine 5'-phosphate oxidase KAM339_030640 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KAM339_030670 PF01029 NusB family KAM339_030670 PF01189 16S rRNA methyltransferase RsmB/F KAM339_030680 PF00462 Glutaredoxin KAM339_030690 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KAM339_030690 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KAM339_030700 PF04333 MlaA lipoprotein KAM339_030720 PF03918 Cytochrome C biogenesis protein KAM339_030730 PF08534 Redoxin KAM339_030740 PF01578 Cytochrome C assembly protein KAM339_030740 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KAM339_030750 PF03100 CcmE KAM339_030760 PF04995 Heme exporter protein D (CcmD) KAM339_030770 PF01578 Cytochrome C assembly protein KAM339_030780 PF03379 CcmB protein KAM339_030790 PF00005 ABC transporter KAM339_030810 PF01584 CheW-like domain KAM339_030830 PF13614 AAA domain KAM339_030840 PF13677 Membrane MotB of proton-channel complex MotA/MotB KAM339_030840 PF00691 OmpA family KAM339_030850 PF01618 MotA/TolQ/ExbB proton channel family KAM339_030860 PF00072 Response regulator receiver domain KAM339_030860 PF01339 CheB methylesterase KAM339_030870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_030870 PF01627 Hpt domain KAM339_030870 PF00072 Response regulator receiver domain KAM339_030870 PF02895 Signal transducing histidine kinase, homodimeric domain KAM339_030870 PF01584 CheW-like domain KAM339_030880 PF04344 Chemotaxis phosphatase, CheZ KAM339_030890 PF00072 Response regulator receiver domain KAM339_030900 PF04539 Sigma-70 region 3 KAM339_030900 PF04545 Sigma-70, region 4 KAM339_030900 PF04542 Sigma-70 region 2 KAM339_030910 PF10609 NUBPL iron-transfer P-loop NTPase KAM339_030920 PF00448 SRP54-type protein, GTPase domain KAM339_030930 PF00771 FHIPEP family KAM339_030940 PF01312 FlhB HrpN YscU SpaS Family KAM339_030950 PF01311 Bacterial export proteins, family 1 KAM339_030960 PF01313 Bacterial export proteins, family 3 KAM339_030970 PF00813 FliP family KAM339_030980 PF04347 Flagellar biosynthesis protein, FliO KAM339_030990 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KAM339_031000 PF02154 Flagellar motor switch protein FliM KAM339_031000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KAM339_031040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAM339_031040 PF18269 T3SS EscN ATPase C-terminal domain KAM339_031060 PF01706 FliG C-terminal domain KAM339_031060 PF14841 FliG middle domain KAM339_031060 PF14842 FliG N-terminal domain KAM339_031070 PF01514 Secretory protein of YscJ/FliF family KAM339_031070 PF08345 Flagellar M-ring protein C-terminal KAM339_031080 PF02049 Flagellar hook-basal body complex protein FliE KAM339_031110 PF03960 ArsC family KAM339_031120 PF01758 Sodium Bile acid symporter family KAM339_031130 PF01022 Bacterial regulatory protein, arsR family KAM339_031140 PF00072 Response regulator receiver domain KAM339_031160 PF18693 TRAM domain KAM339_031160 PF00919 Uncharacterized protein family UPF0004 KAM339_031160 PF04055 Radical SAM superfamily KAM339_031170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAM339_031180 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_031190 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_031190 PF12911 N-terminal TM domain of oligopeptide transport permease C KAM339_031200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAM339_031200 PF00005 ABC transporter KAM339_031210 PF00005 ABC transporter KAM339_031210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAM339_031230 PF01869 BadF/BadG/BcrA/BcrD ATPase family KAM339_031240 PF00728 Glycosyl hydrolase family 20, catalytic domain KAM339_031240 PF02838 Glycosyl hydrolase family 20, domain 2 KAM339_031250 PF08447 PAS fold KAM339_031250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_031280 PF01751 Toprim domain KAM339_031280 PF01396 Topoisomerase DNA binding C4 zinc finger KAM339_031280 PF08272 Topoisomerase I zinc-ribbon-like KAM339_031280 PF01131 DNA topoisomerase KAM339_031290 PF04996 Succinylarginine dihydrolase KAM339_031300 PF01343 Peptidase family S49 KAM339_031300 PF08496 Peptidase family S49 N-terminal KAM339_031310 PF00106 short chain dehydrogenase KAM339_031320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_031320 PF03466 LysR substrate binding domain KAM339_031330 PF07690 Major Facilitator Superfamily KAM339_031340 PF00155 Aminotransferase class I and II KAM339_031360 PF03466 LysR substrate binding domain KAM339_031360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_031370 PF00709 Adenylosuccinate synthetase KAM339_031390 PF01161 Phosphatidylethanolamine-binding protein KAM339_031410 PF01204 Trehalase KAM339_031420 PF00579 tRNA synthetases class I (W and Y) KAM339_031430 PF01476 LysM domain KAM339_031430 PF08525 Opacity-associated protein A N-terminal motif KAM339_031430 PF01551 Peptidase family M23 KAM339_031440 PF03702 Anhydro-N-acetylmuramic acid kinase KAM339_031470 PF01042 Endoribonuclease L-PSP KAM339_031490 PF00456 Transketolase, thiamine diphosphate binding domain KAM339_031490 PF02780 Transketolase, C-terminal domain KAM339_031490 PF02779 Transketolase, pyrimidine binding domain KAM339_031500 PF02773 S-adenosylmethionine synthetase, C-terminal domain KAM339_031500 PF02772 S-adenosylmethionine synthetase, central domain KAM339_031500 PF00438 S-adenosylmethionine synthetase, N-terminal domain KAM339_031510 PF10263 SprT-like family KAM339_031510 PF17283 SprT-like zinc ribbon domain KAM339_031520 PF04231 Endonuclease I KAM339_031530 PF04452 RNA methyltransferase KAM339_031540 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KAM339_031540 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KAM339_031550 PF02622 Uncharacterized ACR, COG1678 KAM339_031560 PF03652 Holliday junction resolvase KAM339_031570 PF03466 LysR substrate binding domain KAM339_031570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_031580 PF07690 Major Facilitator Superfamily KAM339_031590 PF00144 Beta-lactamase KAM339_031600 PF01235 Sodium:alanine symporter family KAM339_031610 PF00923 Transaldolase/Fructose-6-phosphate aldolase KAM339_031640 PF03167 Uracil DNA glycosylase superfamily KAM339_031650 PF01228 Glycine radical KAM339_031660 PF00375 Sodium:dicarboxylate symporter family KAM339_031670 PF00793 DAHP synthetase I family KAM339_031680 PF13369 Transglutaminase-like superfamily KAM339_031700 PF13847 Methyltransferase domain KAM339_031700 PF17827 PrmC N-terminal domain KAM339_031710 PF03462 PCRF domain KAM339_031710 PF00472 RF-1 domain KAM339_031720 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KAM339_031720 PF01488 Shikimate / quinate 5-dehydrogenase KAM339_031720 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KAM339_031730 PF03550 Outer membrane lipoprotein LolB KAM339_031740 PF08544 GHMP kinases C terminal KAM339_031740 PF00288 GHMP kinases N terminal domain KAM339_031750 PF14572 Phosphoribosyl synthetase-associated domain KAM339_031750 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KAM339_031760 PF01195 Peptidyl-tRNA hydrolase KAM339_031770 PF01926 50S ribosome-binding GTPase KAM339_031770 PF06071 Protein of unknown function (DUF933) KAM339_031780 PF03600 Citrate transporter KAM339_031780 PF02080 TrkA-C domain KAM339_031790 PF04266 ASCH domain KAM339_031800 PF07859 alpha/beta hydrolase fold KAM339_031820 PF07690 Major Facilitator Superfamily KAM339_031830 PF13419 Haloacid dehalogenase-like hydrolase KAM339_031860 PF00171 Aldehyde dehydrogenase family KAM339_031870 PF04958 Arginine N-succinyltransferase beta subunit KAM339_031880 PF00202 Aminotransferase class-III KAM339_031890 PF00117 Glutamine amidotransferase class-I KAM339_031910 PF00579 tRNA synthetases class I (W and Y) KAM339_031920 PF13419 Haloacid dehalogenase-like hydrolase KAM339_031930 PF00834 Ribulose-phosphate 3 epimerase family KAM339_031940 PF02086 D12 class N6 adenine-specific DNA methyltransferase KAM339_031950 PF05036 Sporulation related domain KAM339_031960 PF01761 3-dehydroquinate synthase KAM339_031970 PF01202 Shikimate kinase KAM339_031980 PF11741 AMIN domain KAM339_031980 PF00263 Bacterial type II and III secretion system protein KAM339_031980 PF03958 Bacterial type II/III secretion system short domain KAM339_031980 PF07660 Secretin and TonB N terminus short domain KAM339_032000 PF04350 Pilus assembly protein, PilO KAM339_032020 PF11104 Type IV pilus assembly protein PilM; KAM339_032030 PF00905 Penicillin binding protein transpeptidase domain KAM339_032030 PF00912 Transglycosylase KAM339_032030 PF17092 Penicillin-binding protein OB-like domain KAM339_032040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_032040 PF03466 LysR substrate binding domain KAM339_032070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_032070 PF03466 LysR substrate binding domain KAM339_032100 PF02753 Pili assembly chaperone PapD, C-terminal domain KAM339_032100 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KAM339_032110 PF13953 PapC C-terminal domain KAM339_032110 PF13954 PapC N-terminal domain KAM339_032110 PF00577 Outer membrane usher protein KAM339_032120 PF02753 Pili assembly chaperone PapD, C-terminal domain KAM339_032120 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KAM339_032130 PF00419 Fimbrial protein KAM339_032140 PF01476 LysM domain KAM339_032140 PF08525 Opacity-associated protein A N-terminal motif KAM339_032140 PF01551 Peptidase family M23 KAM339_032160 PF12795 Mechanosensitive ion channel porin domain KAM339_032160 PF00924 Mechanosensitive ion channel KAM339_032160 PF12794 Mechanosensitive ion channel inner membrane domain 1 KAM339_032170 PF03009 Glycerophosphoryl diester phosphodiesterase family KAM339_032180 PF02743 Cache domain KAM339_032180 PF00672 HAMP domain KAM339_032180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_032190 PF02910 Fumarate reductase flavoprotein C-term KAM339_032190 PF00890 FAD binding domain KAM339_032200 PF13085 2Fe-2S iron-sulfur cluster binding domain KAM339_032200 PF13183 4Fe-4S dicluster domain KAM339_032210 PF02300 Fumarate reductase subunit C KAM339_032220 PF02313 Fumarate reductase subunit D KAM339_032250 PF06224 Winged helix DNA-binding domain KAM339_032260 PF13847 Methyltransferase domain KAM339_032280 PF00501 AMP-binding enzyme KAM339_032300 PF00106 short chain dehydrogenase KAM339_032320 PF00486 Transcriptional regulatory protein, C terminal KAM339_032320 PF00072 Response regulator receiver domain KAM339_032330 PF08521 Two-component sensor kinase N-terminal KAM339_032330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_032330 PF00512 His Kinase A (phospho-acceptor) domain KAM339_032340 PF18030 RimK PreATP-grasp domain KAM339_032340 PF08443 RimK-like ATP-grasp domain KAM339_032350 PF00478 IMP dehydrogenase / GMP reductase domain KAM339_032370 PF01132 Elongation factor P (EF-P) OB domain KAM339_032370 PF08207 Elongation factor P (EF-P) KOW-like domain KAM339_032370 PF09285 Elongation factor P, C-terminal KAM339_032380 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_032390 PF00005 ABC transporter KAM339_032390 PF09383 NIL domain KAM339_032400 PF03180 NLPA lipoprotein KAM339_032410 PF03171 2OG-Fe(II) oxygenase superfamily KAM339_032410 PF14226 non-haem dioxygenase in morphine synthesis N-terminal KAM339_032430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAM339_032430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAM339_032450 PF17152 Periplasmic sensor domain KAM339_032450 PF00990 Diguanylate cyclase, GGDEF domain KAM339_032470 PF00990 Diguanylate cyclase, GGDEF domain KAM339_032470 PF17151 Periplasmic sensor domain KAM339_032480 PF13419 Haloacid dehalogenase-like hydrolase KAM339_032500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_032500 PF03466 LysR substrate binding domain KAM339_032510 PF00857 Isochorismatase family KAM339_032520 PF01494 FAD binding domain KAM339_032530 PF04055 Radical SAM superfamily KAM339_032530 PF01938 TRAM domain KAM339_032530 PF00919 Uncharacterized protein family UPF0004 KAM339_032540 PF02562 PhoH-like protein KAM339_032550 PF02130 Uncharacterized protein family UPF0054 KAM339_032560 PF00571 CBS domain KAM339_032560 PF03471 Transporter associated domain KAM339_032570 PF00795 Carbon-nitrogen hydrolase KAM339_032580 PF07295 Zinc-ribbon containing domain KAM339_032590 PF00133 tRNA synthetases class I (I, L, M and V) KAM339_032590 PF13603 Leucyl-tRNA synthetase, Domain 2 KAM339_032590 PF08264 Anticodon-binding domain of tRNA KAM339_032620 PF01467 Cytidylyltransferase-like KAM339_032640 PF02590 Predicted SPOUT methyltransferase KAM339_032650 PF03717 Penicillin-binding Protein dimerisation domain KAM339_032650 PF00905 Penicillin binding protein transpeptidase domain KAM339_032660 PF01098 Cell cycle protein KAM339_032670 PF13406 Transglycosylase SLT domain KAM339_032680 PF05036 Sporulation related domain KAM339_032680 PF03330 Lytic transglycolase KAM339_032690 PF00768 D-alanyl-D-alanine carboxypeptidase KAM339_032690 PF07943 Penicillin-binding protein 5, C-terminal domain KAM339_032700 PF04359 Protein of unknown function (DUF493) KAM339_032710 PF03099 Biotin/lipoate A/B protein ligase family KAM339_032720 PF04055 Radical SAM superfamily KAM339_032720 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KAM339_032740 PF02508 Rnf-Nqr subunit, membrane protein KAM339_032770 PF13411 MerR HTH family regulatory protein KAM339_032780 PF17768 RecJ OB domain KAM339_032780 PF01368 DHH family KAM339_032780 PF02272 DHHA1 domain KAM339_032800 PF01741 Large-conductance mechanosensitive channel, MscL KAM339_032810 PF02899 Phage integrase, N-terminal SAM-like domain KAM339_032810 PF00589 Phage integrase family KAM339_032820 PF00258 Flavodoxin KAM339_032830 PF01523 Putative modulator of DNA gyrase KAM339_032840 PF01523 Putative modulator of DNA gyrase KAM339_032860 PF17969 L,D-transpeptidase C-terminal domain KAM339_032860 PF03734 L,D-transpeptidase catalytic domain KAM339_032870 PF01136 Peptidase family U32 KAM339_032870 PF16325 Peptidase family U32 C-terminal domain KAM339_032880 PF12838 4Fe-4S dicluster domain KAM339_032890 PF06476 Protein of unknown function (DUF1090) KAM339_032900 PF02635 DsrE/DsrF-like family KAM339_032910 PF07690 Major Facilitator Superfamily KAM339_032920 PF00575 S1 RNA binding domain KAM339_032920 PF00013 KH domain KAM339_032920 PF01138 3' exoribonuclease family, domain 1 KAM339_032920 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KAM339_032920 PF03725 3' exoribonuclease family, domain 2 KAM339_032930 PF00312 Ribosomal protein S15 KAM339_032940 PF09157 Pseudouridine synthase II TruB, C-terminal KAM339_032940 PF16198 tRNA pseudouridylate synthase B C-terminal domain KAM339_032940 PF01509 TruB family pseudouridylate synthase (N terminal domain) KAM339_032950 PF02033 Ribosome-binding factor A KAM339_032960 PF00009 Elongation factor Tu GTP binding domain KAM339_032960 PF11987 Translation-initiation factor 2 KAM339_032960 PF08364 Bacterial translation initiation factor IF-2 associated region KAM339_032960 PF04760 Translation initiation factor IF-2, N-terminal region KAM339_032970 PF13184 NusA-like KH domain KAM339_032970 PF08529 NusA N-terminal domain KAM339_032970 PF00575 S1 RNA binding domain KAM339_032980 PF17384 RimP C-terminal SH3 domain KAM339_032980 PF02576 RimP N-terminal domain KAM339_032990 PF03840 Preprotein translocase SecG subunit KAM339_033000 PF00121 Triosephosphate isomerase KAM339_033020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KAM339_033020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KAM339_033020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KAM339_033020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KAM339_033030 PF00809 Pterin binding enzyme KAM339_033040 PF00004 ATPase family associated with various cellular activities (AAA) KAM339_033040 PF17862 AAA+ lid domain KAM339_033040 PF06480 FtsH Extracellular KAM339_033040 PF01434 Peptidase family M41 KAM339_033050 PF01728 FtsJ-like methyltransferase KAM339_033060 PF01985 CRS1 / YhbY (CRM) domain KAM339_033080 PF03449 Transcription elongation factor, N-terminal KAM339_033080 PF01272 Transcription elongation factor, GreA/GreB, C-term KAM339_033090 PF00691 OmpA family KAM339_033090 PF13677 Membrane MotB of proton-channel complex MotA/MotB KAM339_033100 PF01618 MotA/TolQ/ExbB proton channel family KAM339_033110 PF02609 Exonuclease VII small subunit KAM339_033120 PF00348 Polyprenyl synthetase KAM339_033130 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KAM339_033130 PF02779 Transketolase, pyrimidine binding domain KAM339_033130 PF02780 Transketolase, C-terminal domain KAM339_033140 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_033140 PF12911 N-terminal TM domain of oligopeptide transport permease C KAM339_033150 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_033160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAM339_033170 PF00005 ABC transporter KAM339_033170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAM339_033180 PF04608 Phosphatidylglycerophosphatase A KAM339_033190 PF00586 AIR synthase related protein, N-terminal domain KAM339_033190 PF02769 AIR synthase related protein, C-terminal domain KAM339_033200 PF01029 NusB family KAM339_033210 PF00885 6,7-dimethyl-8-ribityllumazine synthase KAM339_033220 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KAM339_033220 PF00925 GTP cyclohydrolase II KAM339_033230 PF00677 Lumazine binding domain KAM339_033240 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KAM339_033240 PF01872 RibD C-terminal domain KAM339_033250 PF03477 ATP cone domain KAM339_033270 PF00464 Serine hydroxymethyltransferase KAM339_033290 PF02613 Nitrate reductase delta subunit KAM339_033310 PF00563 EAL domain KAM339_033310 PF03707 Bacterial signalling protein N terminal repeat KAM339_033310 PF00990 Diguanylate cyclase, GGDEF domain KAM339_033320 PF16177 Acetyl-coenzyme A synthetase N-terminus KAM339_033320 PF00501 AMP-binding enzyme KAM339_033320 PF13193 AMP-binding enzyme C-terminal domain KAM339_033330 PF01220 Dehydroquinase class II KAM339_033340 PF00364 Biotin-requiring enzyme KAM339_033350 PF02785 Biotin carboxylase C-terminal domain KAM339_033350 PF00289 Biotin carboxylase, N-terminal domain KAM339_033350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KAM339_033360 PF06196 Protein of unknown function (DUF997) KAM339_033370 PF00474 Sodium:solute symporter family KAM339_033380 PF00367 phosphotransferase system, EIIB KAM339_033380 PF02378 Phosphotransferase system, EIIC KAM339_033380 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KAM339_033390 PF03466 LysR substrate binding domain KAM339_033390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_033400 PF08240 Alcohol dehydrogenase GroES-like domain KAM339_033400 PF00107 Zinc-binding dehydrogenase KAM339_033420 PF00132 Bacterial transferase hexapeptide (six repeats) KAM339_033420 PF12464 Maltose acetyltransferase KAM339_033430 PF02743 Cache domain KAM339_033430 PF00672 HAMP domain KAM339_033430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_033440 PF00881 Nitroreductase family KAM339_033450 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAM339_033450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAM339_033460 PF01343 Peptidase family S49 KAM339_033490 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KAM339_033490 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KAM339_033500 PF07023 Protein of unknown function (DUF1315) KAM339_033510 PF00710 Asparaginase, N-terminal KAM339_033510 PF17763 Glutaminase/Asparaginase C-terminal domain KAM339_033520 PF03616 Sodium/glutamate symporter KAM339_033530 PF02743 Cache domain KAM339_033530 PF00672 HAMP domain KAM339_033530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_033540 PF03462 PCRF domain KAM339_033540 PF00472 RF-1 domain KAM339_033550 PF01336 OB-fold nucleic acid binding domain KAM339_033550 PF00152 tRNA synthetases class II (D, K and N) KAM339_033560 PF02567 Phenazine biosynthesis-like protein KAM339_033570 PF00667 FAD binding domain KAM339_033570 PF00258 Flavodoxin KAM339_033570 PF00175 Oxidoreductase NAD-binding domain KAM339_033580 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KAM339_033580 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KAM339_033590 PF01507 Phosphoadenosine phosphosulfate reductase family KAM339_033600 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KAM339_033610 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_033620 PF00571 CBS domain KAM339_033620 PF00005 ABC transporter KAM339_033630 PF00186 Dihydrofolate reductase KAM339_033640 PF12821 Threonine/Serine exporter, ThrE KAM339_033650 PF06738 Putative threonine/serine exporter KAM339_033670 PF00994 Probable molybdopterin binding domain KAM339_033700 PF00194 Eukaryotic-type carbonic anhydrase KAM339_033710 PF04227 Indigoidine synthase A like protein KAM339_033720 PF00294 pfkB family carbohydrate kinase KAM339_033730 PF18267 Rubredoxin NAD+ reductase C-terminal domain KAM339_033730 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KAM339_033730 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAM339_033730 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KAM339_033730 PF13806 Rieske-like [2Fe-2S] domain KAM339_033730 PF04324 BFD-like [2Fe-2S] binding domain KAM339_033740 PF04324 BFD-like [2Fe-2S] binding domain KAM339_033740 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KAM339_033740 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KAM339_033740 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAM339_033740 PF13806 Rieske-like [2Fe-2S] domain KAM339_033740 PF18267 Rubredoxin NAD+ reductase C-terminal domain KAM339_033750 PF00005 ABC transporter KAM339_033760 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_033770 PF00005 ABC transporter KAM339_033800 PF10414 Sirohaem synthase dimerisation region KAM339_033800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAM339_033800 PF14824 Sirohaem biosynthesis protein central KAM339_033810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KAM339_033810 PF04324 BFD-like [2Fe-2S] binding domain KAM339_033810 PF01568 Molydopterin dinucleotide binding domain KAM339_033810 PF00384 Molybdopterin oxidoreductase KAM339_033840 PF00582 Universal stress protein family KAM339_033860 PF00171 Aldehyde dehydrogenase family KAM339_033870 PF00696 Amino acid kinase family KAM339_033870 PF01472 PUA domain KAM339_033880 PF07417 Sigma factor-binding transcriptional regulator Crl KAM339_033890 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) KAM339_033900 PF00156 Phosphoribosyl transferase domain KAM339_033910 PF01546 Peptidase family M20/M25/M40 KAM339_033910 PF07687 Peptidase dimerisation domain KAM339_033930 PF00005 ABC transporter KAM339_033930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAM339_033940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KAM339_033940 PF00005 ABC transporter KAM339_033950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAM339_033960 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_033960 PF12911 N-terminal TM domain of oligopeptide transport permease C KAM339_033970 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_033980 PF07715 TonB-dependent Receptor Plug Domain KAM339_033980 PF00593 TonB dependent receptor KAM339_034000 PF01618 MotA/TolQ/ExbB proton channel family KAM339_034010 PF01618 MotA/TolQ/ExbB proton channel family KAM339_034020 PF02472 Biopolymer transport protein ExbD/TolR KAM339_034050 PF00704 Glycosyl hydrolases family 18 KAM339_034050 PF06483 Chitinase C KAM339_034080 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAM339_034090 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAM339_034100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_034100 PF00672 HAMP domain KAM339_034120 PF00313 'Cold-shock' DNA-binding domain KAM339_034130 PF00929 Exonuclease KAM339_034140 PF03193 RsgA GTPase KAM339_034150 PF02666 Phosphatidylserine decarboxylase KAM339_034160 PF09905 DNA-binding protein VF530 KAM339_034190 PF02627 Carboxymuconolactone decarboxylase family KAM339_034200 PF12852 Cupin KAM339_034200 PF12833 Helix-turn-helix domain KAM339_034220 PF03707 Bacterial signalling protein N terminal repeat KAM339_034220 PF00990 Diguanylate cyclase, GGDEF domain KAM339_034220 PF00563 EAL domain KAM339_034230 PF06877 Regulator of ribonuclease activity B KAM339_034240 PF00563 EAL domain KAM339_034240 PF01590 GAF domain KAM339_034240 PF00990 Diguanylate cyclase, GGDEF domain KAM339_034240 PF00360 Phytochrome region KAM339_034250 PF05598 Transposase domain (DUF772) KAM339_034250 PF01609 Transposase DDE domain KAM339_034320 PF02899 Phage integrase, N-terminal SAM-like domain KAM339_034320 PF00589 Phage integrase family KAM339_034330 PF01527 Transposase KAM339_034340 PF00563 EAL domain KAM339_034340 PF00990 Diguanylate cyclase, GGDEF domain KAM339_034340 PF05231 MASE1 KAM339_034340 PF08447 PAS fold KAM339_034340 PF13426 PAS domain KAM339_034340 PF08448 PAS fold KAM339_034380 PF00589 Phage integrase family KAM339_034400 PF00561 alpha/beta hydrolase fold KAM339_034410 PF00664 ABC transporter transmembrane region KAM339_034410 PF00005 ABC transporter KAM339_034420 PF06004 Bacterial protein of unknown function (DUF903) KAM339_034430 PF00581 Rhodanese-like domain KAM339_034440 PF04960 Glutaminase KAM339_034450 PF04320 Protein with unknown function (DUF469) KAM339_034460 PF02390 Putative methyltransferase KAM339_034470 PF04389 Peptidase family M28 KAM339_034470 PF01483 Proprotein convertase P-domain KAM339_034480 PF00155 Aminotransferase class I and II KAM339_034490 PF12792 CSS motif domain associated with EAL KAM339_034490 PF00563 EAL domain KAM339_034500 PF08338 Domain of unknown function (DUF1731) KAM339_034500 PF01370 NAD dependent epimerase/dehydratase family KAM339_034520 PF00005 ABC transporter KAM339_034530 PF13472 GDSL-like Lipase/Acylhydrolase family KAM339_034540 PF00072 Response regulator receiver domain KAM339_034540 PF01584 CheW-like domain KAM339_034550 PF00267 Gram-negative porin KAM339_034560 PF00478 IMP dehydrogenase / GMP reductase domain KAM339_034560 PF00571 CBS domain KAM339_034570 PF00005 ABC transporter KAM339_034570 PF12848 ABC transporter KAM339_034590 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KAM339_034670 PF13411 MerR HTH family regulatory protein KAM339_034690 PF00474 Sodium:solute symporter family KAM339_034720 PF03734 L,D-transpeptidase catalytic domain KAM339_034720 PF17969 L,D-transpeptidase C-terminal domain KAM339_034730 PF00924 Mechanosensitive ion channel KAM339_034740 PF00871 Acetokinase family KAM339_034750 PF04074 YhcH/YjgK/YiaL KAM339_034770 PF13302 Acetyltransferase (GNAT) domain KAM339_034780 PF13302 Acetyltransferase (GNAT) domain KAM339_034790 PF07504 Fungalysin/Thermolysin Propeptide Motif KAM339_034790 PF03413 Peptidase propeptide and YPEB domain KAM339_034790 PF01447 Thermolysin metallopeptidase, catalytic domain KAM339_034790 PF02868 Thermolysin metallopeptidase, alpha-helical domain KAM339_034790 PF04151 Bacterial pre-peptidase C-terminal domain KAM339_034800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_034800 PF03466 LysR substrate binding domain KAM339_034810 PF07690 Major Facilitator Superfamily KAM339_034860 PF02080 TrkA-C domain KAM339_034860 PF06826 Predicted Permease Membrane Region KAM339_034870 PF03006 Haemolysin-III related KAM339_034880 PF00282 Pyridoxal-dependent decarboxylase conserved domain KAM339_034890 PF04279 Intracellular septation protein A KAM339_034900 PF03795 YCII-related domain KAM339_034910 PF00459 Inositol monophosphatase family KAM339_034930 PF00483 Nucleotidyl transferase KAM339_034940 PF00854 POT family KAM339_034950 PF00072 Response regulator receiver domain KAM339_035010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAM339_035030 PF01207 Dihydrouridine synthase (Dus) KAM339_035040 PF02954 Bacterial regulatory protein, Fis family KAM339_035060 PF01521 Iron-sulphur cluster biosynthesis KAM339_035080 PF00654 Voltage gated chloride channel KAM339_035090 PF00202 Aminotransferase class-III KAM339_035120 PF01569 PAP2 superfamily KAM339_035140 PF03466 LysR substrate binding domain KAM339_035140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_035150 PF00893 Small Multidrug Resistance protein KAM339_035160 PF00893 Small Multidrug Resistance protein KAM339_035170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAM339_035180 PF14814 Bifunctional transglycosylase second domain KAM339_035180 PF00912 Transglycosylase KAM339_035180 PF00905 Penicillin binding protein transpeptidase domain KAM339_035190 PF00270 DEAD/DEAH box helicase KAM339_035190 PF04408 Helicase associated domain (HA2) KAM339_035190 PF00271 Helicase conserved C-terminal domain KAM339_035190 PF08482 ATP-dependent helicase C-terminal KAM339_035210 PF03749 Sugar fermentation stimulation protein RE domain KAM339_035210 PF17746 SfsA N-terminal OB domain KAM339_035220 PF01258 Prokaryotic dksA/traR C4-type zinc finger KAM339_035230 PF00749 tRNA synthetases class I (E and Q), catalytic domain KAM339_035240 PF01743 Poly A polymerase head domain KAM339_035240 PF12626 Polymerase A arginine-rich C-terminus KAM339_035240 PF12627 Probable RNA and SrmB- binding site of polymerase A KAM339_035250 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KAM339_035260 PF02548 Ketopantoate hydroxymethyltransferase KAM339_035270 PF02569 Pantoate-beta-alanine ligase KAM339_035290 PF01061 ABC-2 type transporter KAM339_035300 PF00005 ABC transporter KAM339_035310 PF00156 Phosphoribosyl transferase domain KAM339_035320 PF00440 Bacterial regulatory proteins, tetR family KAM339_035330 PF02441 Flavoprotein KAM339_035340 PF02875 Mur ligase family, glutamate ligase domain KAM339_035340 PF08245 Mur ligase middle domain KAM339_035340 PF01225 Mur ligase family, catalytic domain KAM339_035350 PF00719 Inorganic pyrophosphatase KAM339_035380 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) KAM339_035410 PF00005 ABC transporter KAM339_035450 PF00672 HAMP domain KAM339_035450 PF12729 Four helix bundle sensory module for signal transduction KAM339_035450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_035530 PF03600 Citrate transporter KAM339_035530 PF02080 TrkA-C domain KAM339_035540 PF00009 Elongation factor Tu GTP binding domain KAM339_035550 PF01507 Phosphoadenosine phosphosulfate reductase family KAM339_035560 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAM339_035560 PF10414 Sirohaem synthase dimerisation region KAM339_035560 PF14824 Sirohaem biosynthesis protein central KAM339_035570 PF16200 C-terminal region of band_7 KAM339_035570 PF01145 SPFH domain / Band 7 family KAM339_035580 PF01957 NfeD-like C-terminal, partner-binding KAM339_035610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KAM339_035610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KAM339_035620 PF07690 Major Facilitator Superfamily KAM339_035630 PF01725 Ham1 family KAM339_035640 PF04055 Radical SAM superfamily KAM339_035640 PF06969 HemN C-terminal domain KAM339_035650 PF03889 Alternative ribosome-rescue factor A KAM339_035670 PF13411 MerR HTH family regulatory protein KAM339_035680 PF01808 AICARFT/IMPCHase bienzyme KAM339_035680 PF02142 MGS-like domain KAM339_035690 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KAM339_035690 PF02843 Phosphoribosylglycinamide synthetase, C domain KAM339_035690 PF02844 Phosphoribosylglycinamide synthetase, N domain KAM339_035720 PF00128 Alpha amylase, catalytic domain KAM339_035740 PF04546 Sigma-70, non-essential region KAM339_035740 PF04539 Sigma-70 region 3 KAM339_035740 PF04545 Sigma-70, region 4 KAM339_035740 PF00140 Sigma-70 factor, region 1.2 KAM339_035740 PF03979 Sigma-70 factor, region 1.1 KAM339_035740 PF04542 Sigma-70 region 2 KAM339_035750 PF10410 DnaB-helicase binding domain of primase KAM339_035750 PF08278 DNA primase DnaG DnaB-binding KAM339_035750 PF01807 CHC2 zinc finger KAM339_035750 PF08275 DNA primase catalytic core, N-terminal domain KAM339_035760 PF09424 Yqey-like protein KAM339_035770 PF01165 Ribosomal protein S21 KAM339_035780 PF00814 Glycoprotease family KAM339_035800 PF00140 Sigma-70 factor, region 1.2 KAM339_035800 PF04542 Sigma-70 region 2 KAM339_035800 PF04545 Sigma-70, region 4 KAM339_035800 PF04539 Sigma-70 region 3 KAM339_035810 PF01476 LysM domain KAM339_035810 PF01551 Peptidase family M23 KAM339_035820 PF09335 SNARE associated Golgi protein KAM339_035840 PF01975 Survival protein SurE KAM339_035850 PF01142 tRNA pseudouridine synthase D (TruD) KAM339_035860 PF02542 YgbB family KAM339_035870 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KAM339_035880 PF04977 Septum formation initiator KAM339_035890 PF03952 Enolase, N-terminal domain KAM339_035890 PF00113 Enolase, C-terminal TIM barrel domain KAM339_035900 PF06418 CTP synthase N-terminus KAM339_035900 PF00117 Glutamine amidotransferase class-I KAM339_035910 PF03819 MazG nucleotide pyrophosphohydrolase domain KAM339_035920 PF13291 ACT domain KAM339_035920 PF02824 TGS domain KAM339_035920 PF04607 Region found in RelA / SpoT proteins KAM339_035930 PF01938 TRAM domain KAM339_035930 PF05958 tRNA (Uracil-5-)-methyltransferase KAM339_035940 PF01627 Hpt domain KAM339_035940 PF00072 Response regulator receiver domain KAM339_035940 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KAM339_035940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_035940 PF00672 HAMP domain KAM339_035940 PF00512 His Kinase A (phospho-acceptor) domain KAM339_035950 PF07308 Protein of unknown function (DUF1456) KAM339_035960 PF01510 N-acetylmuramoyl-L-alanine amidase KAM339_035970 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KAM339_035980 PF02565 Recombination protein O C terminal KAM339_035980 PF11967 Recombination protein O N terminal KAM339_035990 PF07650 KH domain KAM339_035990 PF01926 50S ribosome-binding GTPase KAM339_036000 PF14622 Ribonuclease-III-like KAM339_036000 PF00035 Double-stranded RNA binding motif KAM339_036010 PF10502 Signal peptidase, peptidase S26 KAM339_036020 PF00009 Elongation factor Tu GTP binding domain KAM339_036020 PF03144 Elongation factor Tu domain 2 KAM339_036020 PF06421 GTP-binding protein LepA C-terminus KAM339_036020 PF00679 Elongation factor G C-terminus KAM339_036040 PF03888 MucB/RseB N-terminal domain KAM339_036040 PF17188 MucB/RseB C-terminal domain KAM339_036050 PF03873 Anti sigma-E protein RseA, C-terminal domain KAM339_036050 PF03872 Anti sigma-E protein RseA, N-terminal domain KAM339_036060 PF04542 Sigma-70 region 2 KAM339_036060 PF08281 Sigma-70, region 4 KAM339_036070 PF02910 Fumarate reductase flavoprotein C-term KAM339_036070 PF00890 FAD binding domain KAM339_036090 PF03937 Flavinator of succinate dehydrogenase KAM339_036100 PF01571 Aminomethyltransferase folate-binding domain KAM339_036110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_036110 PF03466 LysR substrate binding domain KAM339_036140 PF03091 CutA1 divalent ion tolerance protein KAM339_036150 PF11412 Disulphide bond corrector protein DsbC KAM339_036150 PF02683 Cytochrome C biogenesis protein transmembrane region KAM339_036170 PF01266 FAD dependent oxidoreductase KAM339_036180 PF01116 Fructose-bisphosphate aldolase class-II KAM339_036190 PF00162 Phosphoglycerate kinase KAM339_036200 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KAM339_036200 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KAM339_036210 PF00480 ROK family KAM339_036220 PF01208 Uroporphyrinogen decarboxylase (URO-D) KAM339_036230 PF00293 NUDIX domain KAM339_036230 PF09297 NADH pyrophosphatase zinc ribbon domain KAM339_036240 PF08239 Bacterial SH3 domain KAM339_036250 PF00027 Cyclic nucleotide-binding domain KAM339_036250 PF00520 Ion transport protein KAM339_036260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_036260 PF00672 HAMP domain KAM339_036260 PF02743 Cache domain KAM339_036280 PF08335 GlnD PII-uridylyltransferase KAM339_036280 PF03710 Glutamate-ammonia ligase adenylyltransferase KAM339_036310 PF00326 Prolyl oligopeptidase family KAM339_036310 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KAM339_036320 PF00291 Pyridoxal-phosphate dependent enzyme KAM339_036330 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_036340 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_036350 PF00005 ABC transporter KAM339_036360 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAM339_036370 PF13194 Domain of unknown function (DUF4010) KAM339_036380 PF14602 Hexapeptide repeat of succinyl-transferase KAM339_036380 PF12464 Maltose acetyltransferase KAM339_036440 PF14552 Tautomerase enzyme KAM339_036450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_036450 PF03466 LysR substrate binding domain KAM339_036460 PF00206 Lyase KAM339_036460 PF14698 Argininosuccinate lyase C-terminal KAM339_036470 PF00764 Arginosuccinate synthase KAM339_036480 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KAM339_036480 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KAM339_036490 PF00696 Amino acid kinase family KAM339_036500 PF02774 Semialdehyde dehydrogenase, dimerisation domain KAM339_036500 PF01118 Semialdehyde dehydrogenase, NAD binding domain KAM339_036510 PF01546 Peptidase family M20/M25/M40 KAM339_036510 PF07687 Peptidase dimerisation domain KAM339_036520 PF00311 Phosphoenolpyruvate carboxylase KAM339_036530 PF00990 Diguanylate cyclase, GGDEF domain KAM339_036540 PF04073 Aminoacyl-tRNA editing domain KAM339_036580 PF00155 Aminotransferase class I and II KAM339_036580 PF00392 Bacterial regulatory proteins, gntR family KAM339_036610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_036610 PF03466 LysR substrate binding domain KAM339_036620 PF03788 LrgA family KAM339_036630 PF04172 LrgB-like family KAM339_036640 PF00742 Homoserine dehydrogenase KAM339_036640 PF00696 Amino acid kinase family KAM339_036640 PF03447 Homoserine dehydrogenase, NAD binding domain KAM339_036650 PF01053 Cys/Met metabolism PLP-dependent enzyme KAM339_036660 PF01340 Met Apo-repressor, MetJ KAM339_036680 PF01588 Putative tRNA binding domain KAM339_036690 PF03222 Tryptophan/tyrosine permease family KAM339_036700 PF00459 Inositol monophosphatase family KAM339_036710 PF00293 NUDIX domain KAM339_036720 PF13419 Haloacid dehalogenase-like hydrolase KAM339_036730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KAM339_036740 PF03466 LysR substrate binding domain KAM339_036740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_036750 PF00579 tRNA synthetases class I (W and Y) KAM339_036750 PF01479 S4 domain KAM339_036760 PF00196 Bacterial regulatory proteins, luxR family KAM339_036770 PF01203 Type II secretion system (T2SS), protein N KAM339_036780 PF04612 Type II secretion system (T2SS), protein M KAM339_036790 PF12693 GspL periplasmic domain KAM339_036790 PF05134 Type II secretion system (T2SS), protein L KAM339_036800 PF03934 Type II secretion system (T2SS), protein K KAM339_036810 PF07963 Prokaryotic N-terminal methylation motif KAM339_036810 PF11612 Type II secretion system (T2SS), protein J KAM339_036820 PF07963 Prokaryotic N-terminal methylation motif KAM339_036820 PF02501 Type II secretion system (T2SS), protein I KAM339_036830 PF12019 Type II transport protein GspH KAM339_036830 PF07963 Prokaryotic N-terminal methylation motif KAM339_036840 PF07963 Prokaryotic N-terminal methylation motif KAM339_036840 PF08334 Type II secretion system (T2SS), protein G KAM339_036850 PF00482 Type II secretion system (T2SS), protein F KAM339_036860 PF00437 Type II/IV secretion system protein KAM339_036870 PF00263 Bacterial type II and III secretion system protein KAM339_036870 PF03958 Bacterial type II/III secretion system short domain KAM339_036880 PF11356 Type II secretion system protein C KAM339_036890 PF01479 S4 domain KAM339_036900 PF01430 Hsp33 protein KAM339_036910 PF01293 Phosphoenolpyruvate carboxykinase KAM339_036920 PF00392 Bacterial regulatory proteins, gntR family KAM339_036930 PF01321 Creatinase/Prolidase N-terminal domain KAM339_036930 PF00557 Metallopeptidase family M24 KAM339_036940 PF00583 Acetyltransferase (GNAT) family KAM339_036950 PF05433 Glycine zipper 2TM domain KAM339_036960 PF01928 CYTH domain KAM339_036970 PF01865 Protein of unknown function DUF47 KAM339_036980 PF01384 Phosphate transporter family KAM339_036990 PF01966 HD domain KAM339_036990 PF01743 Poly A polymerase head domain KAM339_036990 PF12627 Probable RNA and SrmB- binding site of polymerase A KAM339_037000 PF01471 Putative peptidoglycan binding domain KAM339_037000 PF13401 AAA domain KAM339_037010 PF16537 Type II secretion system protein B KAM339_037020 PF10576 Iron-sulfur binding domain of endonuclease III KAM339_037020 PF00633 Helix-hairpin-helix motif KAM339_037020 PF00730 HhH-GPD superfamily base excision DNA repair protein KAM339_037020 PF14815 NUDIX domain KAM339_037030 PF04362 Bacterial Fe(2+) trafficking KAM339_037040 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain KAM339_037040 PF01464 Transglycosylase SLT domain KAM339_037060 PF00657 GDSL-like Lipase/Acylhydrolase KAM339_037070 PF01389 OmpA-like transmembrane domain KAM339_037070 PF00691 OmpA family KAM339_037080 PF03886 ABC-type transport auxiliary lipoprotein component KAM339_037090 PF02470 MlaD protein KAM339_037100 PF04403 Paraquat-inducible protein A KAM339_037110 PF17209 Hfq protein KAM339_037120 PF13419 Haloacid dehalogenase-like hydrolase KAM339_037130 PF00990 Diguanylate cyclase, GGDEF domain KAM339_037130 PF00563 EAL domain KAM339_037130 PF01590 GAF domain KAM339_037130 PF00360 Phytochrome region KAM339_037140 PF00701 Dihydrodipicolinate synthetase family KAM339_037150 PF08468 Methyltransferase small domain N-terminal KAM339_037150 PF05175 Methyltransferase small domain KAM339_037160 PF00483 Nucleotidyl transferase KAM339_037170 PF00534 Glycosyl transferases group 1 KAM339_037170 PF08323 Starch synthase catalytic domain KAM339_037200 PF03553 Na+/H+ antiporter family KAM339_037210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_037210 PF03466 LysR substrate binding domain KAM339_037220 PF13416 Bacterial extracellular solute-binding protein KAM339_037230 PF00005 ABC transporter KAM339_037230 PF08402 TOBE domain KAM339_037240 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_037250 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_037260 PF00171 Aldehyde dehydrogenase family KAM339_037270 PF01040 UbiA prenyltransferase family KAM339_037320 PF00510 Cytochrome c oxidase subunit III KAM339_037330 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 KAM339_037340 PF00115 Cytochrome C and Quinol oxidase polypeptide I KAM339_037350 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KAM339_037350 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KAM339_037360 PF17176 tRNA-binding domain KAM339_037360 PF08351 Domain of unknown function (DUF1726) KAM339_037360 PF13718 GNAT acetyltransferase 2 KAM339_037360 PF05127 Helicase KAM339_037390 PF00210 Ferritin-like domain KAM339_037400 PF02142 MGS-like domain KAM339_037430 PF00710 Asparaginase, N-terminal KAM339_037430 PF17763 Glutaminase/Asparaginase C-terminal domain KAM339_037460 PF00356 Bacterial regulatory proteins, lacI family KAM339_037470 PF02378 Phosphotransferase system, EIIC KAM339_037470 PF00367 phosphotransferase system, EIIB KAM339_037480 PF00128 Alpha amylase, catalytic domain KAM339_037480 PF11941 Domain of unknown function (DUF3459) KAM339_037490 PF14602 Hexapeptide repeat of succinyl-transferase KAM339_037490 PF12464 Maltose acetyltransferase KAM339_037500 PF01037 Lrp/AsnC ligand binding domain KAM339_037510 PF00892 EamA-like transporter family KAM339_037560 PF04222 Protein of unknown function (DUF416) KAM339_037570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAM339_037580 PF01476 LysM domain KAM339_037580 PF01551 Peptidase family M23 KAM339_037580 PF08525 Opacity-associated protein A N-terminal motif KAM339_037620 PF01297 Zinc-uptake complex component A periplasmic KAM339_037630 PF00005 ABC transporter KAM339_037640 PF00950 ABC 3 transport family KAM339_037650 PF03466 LysR substrate binding domain KAM339_037650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_037670 PF03167 Uracil DNA glycosylase superfamily KAM339_037680 PF00892 EamA-like transporter family KAM339_037690 PF01541 GIY-YIG catalytic domain KAM339_037720 PF04012 PspA/IM30 family KAM339_037730 PF01553 Acyltransferase KAM339_037770 PF00578 AhpC/TSA family KAM339_037790 PF01556 DnaJ C terminal domain KAM339_037790 PF00226 DnaJ domain KAM339_037790 PF00684 DnaJ central domain KAM339_037880 PF03989 DNA gyrase C-terminal domain, beta-propeller KAM339_037880 PF00521 DNA gyrase/topoisomerase IV, subunit A KAM339_037890 PF01751 Toprim domain KAM339_037890 PF00204 DNA gyrase B KAM339_037890 PF00986 DNA gyrase B subunit, carboxyl terminus KAM339_037890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_037900 PF04632 Fusaric acid resistance protein family KAM339_037910 PF00529 HlyD membrane-fusion protein of T1SS KAM339_037910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAM339_037920 PF07869 Protein of unknown function (DUF1656) KAM339_037940 PF00293 NUDIX domain KAM339_037950 PF05728 Uncharacterised protein family (UPF0227) KAM339_037960 PF00149 Calcineurin-like phosphoesterase KAM339_037970 PF06853 Protein of unknown function (DUF1249) KAM339_037980 PF00293 NUDIX domain KAM339_037990 PF02321 Outer membrane efflux protein KAM339_038000 PF01467 Cytidylyltransferase-like KAM339_038000 PF00294 pfkB family carbohydrate kinase KAM339_038010 PF03279 Bacterial lipid A biosynthesis acyltransferase KAM339_038020 PF02872 5'-nucleotidase, C-terminal domain KAM339_038020 PF00149 Calcineurin-like phosphoesterase KAM339_038030 PF01810 LysE type translocator KAM339_038040 PF03472 Autoinducer binding domain KAM339_038040 PF00196 Bacterial regulatory proteins, luxR family KAM339_038050 PF00765 Autoinducer synthase KAM339_038060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_038060 PF03466 LysR substrate binding domain KAM339_038070 PF17876 Cold shock domain KAM339_038070 PF08206 Ribonuclease B OB domain KAM339_038070 PF00773 RNB domain KAM339_038080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KAM339_038080 PF02378 Phosphotransferase system, EIIC KAM339_038080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KAM339_038090 PF01232 Mannitol dehydrogenase Rossmann domain KAM339_038090 PF08125 Mannitol dehydrogenase C-terminal domain KAM339_038100 PF05068 Mannitol repressor KAM339_038110 PF03471 Transporter associated domain KAM339_038110 PF00999 Sodium/hydrogen exchanger family KAM339_038110 PF02080 TrkA-C domain KAM339_038140 PF01544 CorA-like Mg2+ transporter protein KAM339_038150 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KAM339_038180 PF07662 Na+ dependent nucleoside transporter C-terminus KAM339_038180 PF01773 Na+ dependent nucleoside transporter N-terminus KAM339_038180 PF07670 Nucleoside recognition KAM339_038190 PF00270 DEAD/DEAH box helicase KAM339_038190 PF00271 Helicase conserved C-terminal domain KAM339_038190 PF03880 DbpA RNA binding domain KAM339_038230 PF01040 UbiA prenyltransferase family KAM339_038240 PF00425 chorismate binding enzyme KAM339_038250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAM339_038250 PF16582 Middle domain of thiamine pyrophosphate KAM339_038250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAM339_038260 PF12697 Alpha/beta hydrolase family KAM339_038270 PF00378 Enoyl-CoA hydratase/isomerase KAM339_038280 PF13378 Enolase C-terminal domain-like KAM339_038290 PF13193 AMP-binding enzyme C-terminal domain KAM339_038290 PF00501 AMP-binding enzyme KAM339_038300 PF01752 Collagenase KAM339_038300 PF08453 Peptidase family M9 N-terminal KAM339_038310 PF02698 DUF218 domain KAM339_038320 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KAM339_038320 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KAM339_038340 PF00561 alpha/beta hydrolase fold KAM339_038380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KAM339_038380 PF12793 Sugar transport-related sRNA regulator N-term KAM339_038400 PF01053 Cys/Met metabolism PLP-dependent enzyme KAM339_038420 PF00465 Iron-containing alcohol dehydrogenase KAM339_038450 PF00106 short chain dehydrogenase KAM339_038490 PF02308 MgtC family KAM339_038500 PF02903 Alpha amylase, N-terminal ig-like domain KAM339_038500 PF00128 Alpha amylase, catalytic domain KAM339_038500 PF16657 Maltogenic Amylase, C-terminal domain KAM339_038520 PF00884 Sulfatase KAM339_038530 PF01037 Lrp/AsnC ligand binding domain KAM339_038550 PF04204 Homoserine O-succinyltransferase KAM339_038570 PF00994 Probable molybdopterin binding domain KAM339_038570 PF02464 Competence-damaged protein KAM339_038580 PF04307 LexA-binding, inner membrane-associated putative hydrolase KAM339_038610 PF07722 Peptidase C26 KAM339_038630 PF13419 Haloacid dehalogenase-like hydrolase KAM339_038640 PF00589 Phage integrase family KAM339_038640 PF02899 Phage integrase, N-terminal SAM-like domain KAM339_038660 PF01678 Diaminopimelate epimerase KAM339_038670 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KAM339_038670 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KAM339_038690 PF01491 Frataxin-like domain KAM339_038700 PF02230 Phospholipase/Carboxylesterase KAM339_038710 PF12633 Adenylate cyclase NT domain KAM339_038710 PF01295 Adenylate cyclase, class-I KAM339_038720 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KAM339_038720 PF03900 Porphobilinogen deaminase, C-terminal domain KAM339_038730 PF02602 Uroporphyrinogen-III synthase HemD KAM339_038740 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase KAM339_038750 PF07219 HemY protein N-terminus KAM339_038750 PF07719 Tetratricopeptide repeat KAM339_038770 PF01523 Putative modulator of DNA gyrase KAM339_038780 PF04751 Protein of unknown function (DUF615) KAM339_038800 PF04363 Protein of unknown function (DUF496) KAM339_038820 PF01381 Helix-turn-helix KAM339_038820 PF07883 Cupin domain KAM339_038830 PF03594 Benzoate membrane transport protein KAM339_038850 PF02219 Methylenetetrahydrofolate reductase KAM339_038880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_038880 PF00672 HAMP domain KAM339_038880 PF12729 Four helix bundle sensory module for signal transduction KAM339_038890 PF03922 OmpW family KAM339_038900 PF00005 ABC transporter KAM339_038900 PF17760 UvrA interaction domain KAM339_038900 PF17755 UvrA DNA-binding domain KAM339_038910 PF00196 Bacterial regulatory proteins, luxR family KAM339_038920 PF00436 Single-strand binding protein family KAM339_038960 PF00313 'Cold-shock' DNA-binding domain KAM339_038970 PF00672 HAMP domain KAM339_038970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_038970 PF00512 His Kinase A (phospho-acceptor) domain KAM339_038980 PF00486 Transcriptional regulatory protein, C terminal KAM339_038980 PF00072 Response regulator receiver domain KAM339_039000 PF00672 HAMP domain KAM339_039000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_039020 PF00990 Diguanylate cyclase, GGDEF domain KAM339_039020 PF08448 PAS fold KAM339_039030 PF00543 Nitrogen regulatory protein P-II KAM339_039040 PF00909 Ammonium Transporter Family KAM339_039060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAM339_039080 PF00912 Transglycosylase KAM339_039080 PF00905 Penicillin binding protein transpeptidase domain KAM339_039090 PF13538 UvrD-like helicase C-terminal domain KAM339_039100 PF12705 PD-(D/E)XK nuclease superfamily KAM339_039100 PF00580 UvrD/REP helicase N-terminal domain KAM339_039100 PF13361 UvrD-like helicase C-terminal domain KAM339_039110 PF17946 RecC C-terminal domain KAM339_039120 PF07681 DoxX KAM339_039130 PF02678 Pirin KAM339_039130 PF17954 Quercetinase C-terminal cupin domain KAM339_039150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_039150 PF03466 LysR substrate binding domain KAM339_039170 PF00392 Bacterial regulatory proteins, gntR family KAM339_039170 PF07702 UTRA domain KAM339_039200 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_039220 PF00005 ABC transporter KAM339_039220 PF08402 TOBE domain KAM339_039240 PF00990 Diguanylate cyclase, GGDEF domain KAM339_039240 PF00072 Response regulator receiver domain KAM339_039280 PF00583 Acetyltransferase (GNAT) family KAM339_039290 PF00199 Catalase KAM339_039290 PF06628 Catalase-related immune-responsive KAM339_039330 PF00293 NUDIX domain KAM339_039340 PF01594 AI-2E family transporter KAM339_039350 PF00106 short chain dehydrogenase KAM339_039360 PF04371 Porphyromonas-type peptidyl-arginine deiminase KAM339_039370 PF13416 Bacterial extracellular solute-binding protein KAM339_039380 PF00795 Carbon-nitrogen hydrolase KAM339_039390 PF04371 Porphyromonas-type peptidyl-arginine deiminase KAM339_039400 PF03466 LysR substrate binding domain KAM339_039400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_039410 PF00158 Sigma-54 interaction domain KAM339_039410 PF00989 PAS fold KAM339_039410 PF02954 Bacterial regulatory protein, Fis family KAM339_039420 PF03610 PTS system fructose IIA component KAM339_039420 PF05524 PEP-utilising enzyme, N-terminal KAM339_039420 PF00381 PTS HPr component phosphorylation site KAM339_039420 PF00391 PEP-utilising enzyme, mobile domain KAM339_039430 PF02734 DAK2 domain KAM339_039440 PF02733 Dak1 domain KAM339_039450 PF00860 Permease family KAM339_039460 PF01695 IstB-like ATP binding protein KAM339_039470 PF00665 Integrase core domain KAM339_039480 PF03079 ARD/ARD' family KAM339_039500 PF00009 Elongation factor Tu GTP binding domain KAM339_039500 PF03144 Elongation factor Tu domain 2 KAM339_039500 PF03143 Elongation factor Tu C-terminal domain KAM339_039510 PF14492 Elongation Factor G, domain II KAM339_039510 PF03144 Elongation factor Tu domain 2 KAM339_039510 PF00009 Elongation factor Tu GTP binding domain KAM339_039510 PF03764 Elongation factor G, domain IV KAM339_039510 PF00679 Elongation factor G C-terminus KAM339_039520 PF00177 Ribosomal protein S7p/S5e KAM339_039530 PF00164 Ribosomal protein S12/S23 KAM339_039540 PF04077 DsrH like protein KAM339_039550 PF02635 DsrE/DsrF-like family KAM339_039560 PF02635 DsrE/DsrF-like family KAM339_039570 PF01042 Endoribonuclease L-PSP KAM339_039580 PF13309 HTH domain KAM339_039580 PF08348 YheO-like PAS domain KAM339_039590 PF04998 RNA polymerase Rpb1, domain 5 KAM339_039590 PF05000 RNA polymerase Rpb1, domain 4 KAM339_039590 PF00623 RNA polymerase Rpb1, domain 2 KAM339_039590 PF04997 RNA polymerase Rpb1, domain 1 KAM339_039590 PF04983 RNA polymerase Rpb1, domain 3 KAM339_039600 PF04563 RNA polymerase beta subunit KAM339_039600 PF04561 RNA polymerase Rpb2, domain 2 KAM339_039600 PF10385 RNA polymerase beta subunit external 1 domain KAM339_039600 PF04565 RNA polymerase Rpb2, domain 3 KAM339_039600 PF04560 RNA polymerase Rpb2, domain 7 KAM339_039600 PF00562 RNA polymerase Rpb2, domain 6 KAM339_039610 PF16320 Ribosomal protein L7/L12 dimerisation domain KAM339_039610 PF00542 Ribosomal protein L7/L12 C-terminal domain KAM339_039620 PF00466 Ribosomal protein L10 KAM339_039630 PF00687 Ribosomal protein L1p/L10e family KAM339_039640 PF00298 Ribosomal protein L11, RNA binding domain KAM339_039640 PF03946 Ribosomal protein L11, N-terminal domain KAM339_039650 PF00467 KOW motif KAM339_039650 PF02357 Transcription termination factor nusG KAM339_039660 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KAM339_039670 PF03143 Elongation factor Tu C-terminal domain KAM339_039670 PF03144 Elongation factor Tu domain 2 KAM339_039670 PF00009 Elongation factor Tu GTP binding domain KAM339_039680 PF00485 Phosphoribulokinase / Uridine kinase family KAM339_039690 PF03099 Biotin/lipoate A/B protein ligase family KAM339_039690 PF08279 HTH domain KAM339_039690 PF02237 Biotin protein ligase C terminal domain KAM339_039700 PF01565 FAD binding domain KAM339_039700 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KAM339_039710 PF02080 TrkA-C domain KAM339_039710 PF02254 TrkA-N domain KAM339_039720 PF02386 Cation transport protein KAM339_039730 PF01131 DNA topoisomerase KAM339_039730 PF01751 Toprim domain KAM339_039740 PF03264 NapC/NirT cytochrome c family, N-terminal region KAM339_039750 PF01568 Molydopterin dinucleotide binding domain KAM339_039750 PF18364 Molybdopterin oxidoreductase N-terminal domain KAM339_039750 PF00384 Molybdopterin oxidoreductase KAM339_039770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_039780 PF00072 Response regulator receiver domain KAM339_039780 PF00486 Transcriptional regulatory protein, C terminal KAM339_039810 PF01794 Ferric reductase like transmembrane component KAM339_039820 PF00174 Oxidoreductase molybdopterin binding domain KAM339_039830 PF06496 Protein of unknown function (DUF1097) KAM339_039840 PF00072 Response regulator receiver domain KAM339_039840 PF00158 Sigma-54 interaction domain KAM339_039860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_039860 PF00512 His Kinase A (phospho-acceptor) domain KAM339_039890 PF00571 CBS domain KAM339_039890 PF00478 IMP dehydrogenase / GMP reductase domain KAM339_039910 PF01037 Lrp/AsnC ligand binding domain KAM339_039920 PF03590 Aspartate-ammonia ligase KAM339_039940 PF07724 AAA domain (Cdc48 subfamily) KAM339_039940 PF17871 AAA lid domain KAM339_039940 PF02861 Clp amino terminal domain, pathogenicity island component KAM339_039940 PF10431 C-terminal, D2-small domain, of ClpB protein KAM339_039940 PF00004 ATPase family associated with various cellular activities (AAA) KAM339_039950 PF02578 Multi-copper polyphenol oxidoreductase laccase KAM339_039960 PF00849 RNA pseudouridylate synthase KAM339_039960 PF01479 S4 domain KAM339_039970 PF13525 Outer membrane lipoprotein KAM339_039980 PF03313 Serine dehydratase alpha chain KAM339_039990 PF08348 YheO-like PAS domain KAM339_039990 PF13309 HTH domain KAM339_040000 PF02233 NAD(P) transhydrogenase beta subunit KAM339_040010 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KAM339_040010 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KAM339_040010 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KAM339_040020 PF00465 Iron-containing alcohol dehydrogenase KAM339_040030 PF12833 Helix-turn-helix domain KAM339_040030 PF06719 AraC-type transcriptional regulator N-terminus KAM339_040040 PF08212 Lipocalin-like domain KAM339_040060 PF00672 HAMP domain KAM339_040060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_040060 PF02743 Cache domain KAM339_040080 PF03466 LysR substrate binding domain KAM339_040080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_040110 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KAM339_040110 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KAM339_040120 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain KAM339_040120 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain KAM339_040130 PF02863 Arginine repressor, C-terminal domain KAM339_040130 PF01316 Arginine repressor, DNA binding domain KAM339_040140 PF03606 C4-dicarboxylate anaerobic carrier KAM339_040150 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KAM339_040150 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KAM339_040160 PF00696 Amino acid kinase family KAM339_040190 PF02743 Cache domain KAM339_040190 PF00672 HAMP domain KAM339_040190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_040200 PF02653 Branched-chain amino acid transport system / permease component KAM339_040210 PF00005 ABC transporter KAM339_040220 PF13407 Periplasmic binding protein domain KAM339_040230 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KAM339_040230 PF00703 Glycosyl hydrolases family 2 KAM339_040230 PF16353 Domain of unknown function(DUF4981) KAM339_040230 PF02929 Beta galactosidase small chain KAM339_040230 PF02837 Glycosyl hydrolases family 2, sugar binding domain KAM339_040250 PF00356 Bacterial regulatory proteins, lacI family KAM339_040260 PF16363 GDP-mannose 4,6 dehydratase KAM339_040270 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KAM339_040270 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KAM339_040280 PF10509 Galactokinase galactose-binding signature KAM339_040280 PF08544 GHMP kinases C terminal KAM339_040280 PF00288 GHMP kinases N terminal domain KAM339_040290 PF01263 Aldose 1-epimerase KAM339_040300 PF00248 Aldo/keto reductase family KAM339_040310 PF02673 Bacitracin resistance protein BacA KAM339_040320 PF12973 ChrR Cupin-like domain KAM339_040330 PF04545 Sigma-70, region 4 KAM339_040330 PF04542 Sigma-70 region 2 KAM339_040350 PF00750 tRNA synthetases class I (R) KAM339_040350 PF05746 DALR anticodon binding domain KAM339_040350 PF03485 Arginyl tRNA synthetase N terminal domain KAM339_040370 PF00227 Proteasome subunit KAM339_040380 PF10431 C-terminal, D2-small domain, of ClpB protein KAM339_040380 PF00004 ATPase family associated with various cellular activities (AAA) KAM339_040380 PF07724 AAA domain (Cdc48 subfamily) KAM339_040390 PF07690 Major Facilitator Superfamily KAM339_040420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KAM339_040430 PF00005 ABC transporter KAM339_040460 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KAM339_040460 PF18267 Rubredoxin NAD+ reductase C-terminal domain KAM339_040460 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KAM339_040460 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAM339_040460 PF04324 BFD-like [2Fe-2S] binding domain KAM339_040470 PF13806 Rieske-like [2Fe-2S] domain KAM339_040480 PF01226 Formate/nitrite transporter KAM339_040490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KAM339_040490 PF10414 Sirohaem synthase dimerisation region KAM339_040490 PF14824 Sirohaem biosynthesis protein central KAM339_040500 PF00571 CBS domain KAM339_040500 PF01769 Divalent cation transporter KAM339_040500 PF03448 MgtE intracellular N domain KAM339_040510 PF03737 Aldolase/RraA KAM339_040520 PF02592 Putative vitamin uptake transporter KAM339_040540 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KAM339_040550 PF00034 Cytochrome c KAM339_040560 PF00271 Helicase conserved C-terminal domain KAM339_040560 PF09382 RQC domain KAM339_040560 PF00270 DEAD/DEAH box helicase KAM339_040560 PF00570 HRDC domain KAM339_040560 PF16124 RecQ zinc-binding KAM339_040570 PF03061 Thioesterase superfamily KAM339_040590 PF03473 MOSC domain KAM339_040590 PF03475 3-alpha domain KAM339_040600 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_040610 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_040620 PF00005 ABC transporter KAM339_040620 PF08402 TOBE domain KAM339_040630 PF13416 Bacterial extracellular solute-binding protein KAM339_040640 PF13416 Bacterial extracellular solute-binding protein KAM339_040650 PF00202 Aminotransferase class-III KAM339_040660 PF00120 Glutamine synthetase, catalytic domain KAM339_040670 PF01258 Prokaryotic dksA/traR C4-type zinc finger KAM339_040700 PF05981 CreA protein KAM339_040710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KAM339_040710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KAM339_040720 PF00012 Hsp70 protein KAM339_040750 PF00128 Alpha amylase, catalytic domain KAM339_040750 PF02903 Alpha amylase, N-terminal ig-like domain KAM339_040780 PF05958 tRNA (Uracil-5-)-methyltransferase KAM339_040790 PF00072 Response regulator receiver domain KAM339_040790 PF00486 Transcriptional regulatory protein, C terminal KAM339_040800 PF00672 HAMP domain KAM339_040800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_040800 PF00512 His Kinase A (phospho-acceptor) domain KAM339_040820 PF00390 Malic enzyme, N-terminal domain KAM339_040820 PF03949 Malic enzyme, NAD binding domain KAM339_040830 PF11066 Protein of unknown function (DUF2867) KAM339_040830 PF13460 NAD(P)H-binding KAM339_040840 PF01197 Ribosomal protein L31 KAM339_040850 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KAM339_040850 PF18074 Primosomal protein N C-terminal domain KAM339_040850 PF00270 DEAD/DEAH box helicase KAM339_040850 PF17764 3′ DNA-binding domain (3′BD) KAM339_040850 PF00271 Helicase conserved C-terminal domain KAM339_040860 PF00440 Bacterial regulatory proteins, tetR family KAM339_040880 PF00691 OmpA family KAM339_040880 PF01389 OmpA-like transmembrane domain KAM339_040890 PF00291 Pyridoxal-phosphate dependent enzyme KAM339_040890 PF00585 C-terminal regulatory domain of Threonine dehydratase KAM339_040900 PF00920 Dehydratase family KAM339_040910 PF01063 Amino-transferase class IV KAM339_040930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KAM339_040930 PF00205 Thiamine pyrophosphate enzyme, central domain KAM339_040930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KAM339_040940 PF01078 Magnesium chelatase, subunit ChlI KAM339_040940 PF13335 Magnesium chelatase, subunit ChlI C-terminal KAM339_040950 PF01553 Acyltransferase KAM339_040960 PF01553 Acyltransferase KAM339_040970 PF04463 Protein of unknown function (DUF523) KAM339_040990 PF00857 Isochorismatase family KAM339_041000 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KAM339_041000 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KAM339_041010 PF01323 DSBA-like thioredoxin domain KAM339_041020 PF01636 Phosphotransferase enzyme family KAM339_041030 PF13746 4Fe-4S dicluster domain KAM339_041030 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase KAM339_041030 PF12801 4Fe-4S binding domain KAM339_041040 PF06288 Protein of unknown function (DUF1040) KAM339_041050 PF00563 EAL domain KAM339_041050 PF00990 Diguanylate cyclase, GGDEF domain KAM339_041050 PF00360 Phytochrome region KAM339_041050 PF01590 GAF domain KAM339_041060 PF00376 MerR family regulatory protein KAM339_041060 PF09278 MerR, DNA binding KAM339_041070 PF00403 Heavy-metal-associated domain KAM339_041080 PF00156 Phosphoribosyl transferase domain KAM339_041090 PF01138 3' exoribonuclease family, domain 1 KAM339_041090 PF03725 3' exoribonuclease family, domain 2 KAM339_041100 PF08340 Domain of unknown function (DUF1732) KAM339_041100 PF03755 YicC-like family, N-terminal region KAM339_041180 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) KAM339_041190 PF01867 CRISPR associated protein Cas1 KAM339_041200 PF08798 CRISPR associated protein KAM339_041220 PF09344 CT1975-like protein KAM339_041240 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) KAM339_041250 PF18395 Cas3 C-terminal domain KAM339_041250 PF18019 HD domain KAM339_041290 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KAM339_041300 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KAM339_041310 PF00535 Glycosyl transferase family 2 KAM339_041320 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KAM339_041330 PF01467 Cytidylyltransferase-like KAM339_041340 PF04393 Protein of unknown function (DUF535) KAM339_041350 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KAM339_041350 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KAM339_041350 PF06827 Zinc finger found in FPG and IleRS KAM339_041370 PF00471 Ribosomal protein L33 KAM339_041380 PF00830 Ribosomal L28 family KAM339_041390 PF04002 RadC-like JAB domain KAM339_041400 PF02441 Flavoprotein KAM339_041400 PF04127 DNA / pantothenate metabolism flavoprotein KAM339_041410 PF00692 dUTPase KAM339_041420 PF00440 Bacterial regulatory proteins, tetR family KAM339_041440 PF00924 Mechanosensitive ion channel KAM339_041440 PF05552 Conserved TM helix KAM339_041460 PF00342 Phosphoglucose isomerase KAM339_041480 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KAM339_041480 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KAM339_041490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_041490 PF03466 LysR substrate binding domain KAM339_041510 PF13607 Succinyl-CoA ligase like flavodoxin domain KAM339_041510 PF00583 Acetyltransferase (GNAT) family KAM339_041510 PF13380 CoA binding domain KAM339_041520 PF12724 Flavodoxin domain KAM339_041530 PF02386 Cation transport protein KAM339_041540 PF09186 Domain of unknown function (DUF1949) KAM339_041540 PF01205 Uncharacterized protein family UPF0029 KAM339_041550 PF00557 Metallopeptidase family M24 KAM339_041560 PF00501 AMP-binding enzyme KAM339_041560 PF13193 AMP-binding enzyme C-terminal domain KAM339_041570 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KAM339_041570 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KAM339_041570 PF00378 Enoyl-CoA hydratase/isomerase KAM339_041580 PF02803 Thiolase, C-terminal domain KAM339_041580 PF00108 Thiolase, N-terminal domain KAM339_041590 PF00486 Transcriptional regulatory protein, C terminal KAM339_041590 PF00072 Response regulator receiver domain KAM339_041600 PF00672 HAMP domain KAM339_041600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_041600 PF00512 His Kinase A (phospho-acceptor) domain KAM339_041610 PF01547 Bacterial extracellular solute-binding protein KAM339_041630 PF01206 Sulfurtransferase TusA KAM339_041640 PF01042 Endoribonuclease L-PSP KAM339_041660 PF00691 OmpA family KAM339_041660 PF13488 Glycine zipper KAM339_041680 PF00857 Isochorismatase family KAM339_041690 PF03352 Methyladenine glycosylase KAM339_041700 PF02091 Glycyl-tRNA synthetase alpha subunit KAM339_041710 PF02092 Glycyl-tRNA synthetase beta subunit KAM339_041710 PF05746 DALR anticodon binding domain KAM339_041730 PF00990 Diguanylate cyclase, GGDEF domain KAM339_041730 PF03707 Bacterial signalling protein N terminal repeat KAM339_041730 PF00563 EAL domain KAM339_041760 PF03222 Tryptophan/tyrosine permease family KAM339_041770 PF03222 Tryptophan/tyrosine permease family KAM339_041780 PF01212 Beta-eliminating lyase KAM339_041790 PF12801 4Fe-4S binding domain KAM339_041810 PF18113 Rubredoxin binding C-terminal domain KAM339_041810 PF07992 Pyridine nucleotide-disulphide oxidoreductase KAM339_041820 PF00258 Flavodoxin KAM339_041820 PF00753 Metallo-beta-lactamase superfamily KAM339_041820 PF00301 Rubredoxin KAM339_041830 PF01590 GAF domain KAM339_041830 PF00158 Sigma-54 interaction domain KAM339_041840 PF00356 Bacterial regulatory proteins, lacI family KAM339_041850 PF13458 Periplasmic binding protein KAM339_041860 PF02653 Branched-chain amino acid transport system / permease component KAM339_041870 PF02653 Branched-chain amino acid transport system / permease component KAM339_041870 PF11862 Domain of unknown function (DUF3382) KAM339_041880 PF00005 ABC transporter KAM339_041880 PF12399 Branched-chain amino acid ATP-binding cassette transporter KAM339_041890 PF00005 ABC transporter KAM339_041910 PF01810 LysE type translocator KAM339_041920 PF00581 Rhodanese-like domain KAM339_041930 PF01694 Rhomboid family KAM339_041930 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease KAM339_041940 PF12262 Bacterial virulence factor lipase N-terminal KAM339_041950 PF04380 Membrane fusogenic activity KAM339_041960 PF00175 Oxidoreductase NAD-binding domain KAM339_041970 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase KAM339_041990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAM339_041990 PF07498 Rho termination factor, N-terminal domain KAM339_041990 PF07497 Rho termination factor, RNA-binding domain KAM339_042000 PF00085 Thioredoxin KAM339_042010 PF00270 DEAD/DEAH box helicase KAM339_042010 PF00271 Helicase conserved C-terminal domain KAM339_042020 PF02541 Ppx/GppA phosphatase family KAM339_042040 PF04445 Putative SAM-dependent methyltransferase KAM339_042050 PF00563 EAL domain KAM339_042050 PF00990 Diguanylate cyclase, GGDEF domain KAM339_042050 PF03707 Bacterial signalling protein N terminal repeat KAM339_042060 PF01432 Peptidase family M3 KAM339_042070 PF00490 Delta-aminolevulinic acid dehydratase KAM339_042080 PF01026 TatD related DNase KAM339_042090 PF00902 Sec-independent protein translocase protein (TatC) KAM339_042100 PF02416 mttA/Hcf106 family KAM339_042110 PF02416 mttA/Hcf106 family KAM339_042120 PF03109 ABC1 family KAM339_042130 PF02036 SCP-2 sterol transfer family KAM339_042140 PF01209 ubiE/COQ5 methyltransferase family KAM339_042150 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KAM339_042160 PF07969 Amidohydrolase family KAM339_042170 PF01695 IstB-like ATP binding protein KAM339_042180 PF00665 Integrase core domain KAM339_042190 PF07969 Amidohydrolase family KAM339_042210 PF03544 Gram-negative bacterial TonB protein C-terminal KAM339_042220 PF02472 Biopolymer transport protein ExbD/TolR KAM339_042230 PF01618 MotA/TolQ/ExbB proton channel family KAM339_042240 PF01618 MotA/TolQ/ExbB proton channel family KAM339_042260 PF00196 Bacterial regulatory proteins, luxR family KAM339_042260 PF03472 Autoinducer binding domain KAM339_042270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_042270 PF00512 His Kinase A (phospho-acceptor) domain KAM339_042270 PF01627 Hpt domain KAM339_042270 PF00072 Response regulator receiver domain KAM339_042270 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KAM339_042270 PF00672 HAMP domain KAM339_042280 PF00072 Response regulator receiver domain KAM339_042290 PF01380 SIS domain KAM339_042300 PF00455 DeoR C terminal sensor domain KAM339_042300 PF08220 DeoR-like helix-turn-helix domain KAM339_042310 PF00072 Response regulator receiver domain KAM339_042310 PF00486 Transcriptional regulatory protein, C terminal KAM339_042320 PF00512 His Kinase A (phospho-acceptor) domain KAM339_042320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KAM339_042320 PF00672 HAMP domain KAM339_042330 PF00905 Penicillin binding protein transpeptidase domain KAM339_042340 PF06123 Inner membrane protein CreD KAM339_042350 PF00132 Bacterial transferase hexapeptide (six repeats) KAM339_042350 PF14602 Hexapeptide repeat of succinyl-transferase KAM339_042350 PF12804 MobA-like NTP transferase domain KAM339_042360 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KAM339_042360 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KAM339_042370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAM339_042370 PF02874 ATP synthase alpha/beta family, beta-barrel domain KAM339_042380 PF00231 ATP synthase KAM339_042390 PF02874 ATP synthase alpha/beta family, beta-barrel domain KAM339_042390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KAM339_042390 PF00306 ATP synthase alpha/beta chain, C terminal domain KAM339_042400 PF00213 ATP synthase delta (OSCP) subunit KAM339_042410 PF00430 ATP synthase B/B' CF(0) KAM339_042420 PF00137 ATP synthase subunit C KAM339_042430 PF00119 ATP synthase A chain KAM339_042450 PF17762 HTH domain found in ParB protein KAM339_042450 PF02195 ParB-like nuclease domain KAM339_042460 PF13614 AAA domain KAM339_042470 PF02527 rRNA small subunit methyltransferase G KAM339_042480 PF01134 Glucose inhibited division protein A KAM339_042480 PF13932 GidA associated domain KAM339_042490 PF00258 Flavodoxin KAM339_042500 PF07715 TonB-dependent Receptor Plug Domain KAM339_042500 PF00593 TonB dependent receptor KAM339_042510 PF00005 ABC transporter KAM339_042520 PF00005 ABC transporter KAM339_042530 PF01497 Periplasmic binding protein KAM339_042540 PF01032 FecCD transport family KAM339_042550 PF01926 50S ribosome-binding GTPase KAM339_042550 PF12631 MnmE helical domain KAM339_042550 PF10396 GTP-binding protein TrmE N-terminus KAM339_042560 PF02096 60Kd inner membrane protein KAM339_042560 PF14849 YidC periplasmic domain KAM339_042570 PF00825 Ribonuclease P KAM339_042580 PF00005 ABC transporter KAM339_042590 PF00528 Binding-protein-dependent transport system inner membrane component KAM339_042600 PF00497 Bacterial extracellular solute-binding proteins, family 3 KAM339_042670 PF01695 IstB-like ATP binding protein KAM339_042680 PF00665 Integrase core domain KAM339_042690 PF04381 Putative exonuclease, RdgC KAM339_042700 PF01609 Transposase DDE domain KAM339_042780 PF01527 Transposase KAM339_042810 PF00565 Staphylococcal nuclease homologue KAM339_042820 PF00216 Bacterial DNA-binding protein KAM339_042870 PF13614 AAA domain KAM339_042880 PF08535 KorB domain KAM339_042880 PF06613 KorB C-terminal beta-barrel domain KAM339_042880 PF02195 ParB-like nuclease domain KAM339_042960 PF10544 T5orf172 domain KAM339_043010 PF01131 DNA topoisomerase KAM339_043010 PF01751 Toprim domain KAM339_043150 PF03958 Bacterial type II/III secretion system short domain KAM339_043150 PF00263 Bacterial type II and III secretion system protein KAM339_043200 PF10411 Disulfide bond isomerase protein N-terminus KAM339_043200 PF13098 Thioredoxin-like domain KAM339_043240 PF12477 Sex factor F TraW protein N terminal KAM339_043260 PF06834 TraU protein KAM339_043270 PF06986 Type-1V conjugative transfer system mating pair stabilisation KAM339_043280 PF01609 Transposase DDE domain KAM339_043300 PF01609 Transposase DDE domain KAM339_043310 PF02810 SEC-C motif KAM339_043310 PF07517 SecA DEAD-like domain KAM339_043310 PF07516 SecA Wing and Scaffold domain KAM339_043310 PF01043 SecA preprotein cross-linking domain KAM339_043340 PF00483 Nucleotidyl transferase KAM339_043420 PF07728 AAA domain (dynein-related subfamily) KAM339_043420 PF08406 CbbQ/NirQ/NorQ C-terminal KAM339_043550 PF00111 2Fe-2S iron-sulfur cluster binding domain KAM339_043690 PF02796 Helix-turn-helix domain of resolvase KAM339_043690 PF00239 Resolvase, N terminal domain KAM339_043770 PF02796 Helix-turn-helix domain of resolvase KAM339_043770 PF00239 Resolvase, N terminal domain KAM339_043780 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ KAM339_043790 PF03707 Bacterial signalling protein N terminal repeat KAM339_043790 PF00990 Diguanylate cyclase, GGDEF domain KAM339_043790 PF00563 EAL domain KAM339_043800 PF13426 PAS domain KAM339_043800 PF08447 PAS fold KAM339_043800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_043850 PF02796 Helix-turn-helix domain of resolvase KAM339_043850 PF00239 Resolvase, N terminal domain KAM339_043890 PF01526 Tn3 transposase DDE domain KAM339_043890 PF13700 Domain of unknown function (DUF4158) KAM339_043920 PF03743 Bacterial conjugation TrbI-like protein KAM339_043940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_043940 PF03466 LysR substrate binding domain KAM339_043960 PF01047 MarR family KAM339_044000 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KAM339_044030 PF01625 Peptide methionine sulfoxide reductase KAM339_044060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KAM339_044060 PF03466 LysR substrate binding domain KAM339_044070 PF01641 SelR domain KAM339_044080 PF01625 Peptide methionine sulfoxide reductase KAM339_044090 PF02798 Glutathione S-transferase, N-terminal domain KAM339_044090 PF00043 Glutathione S-transferase, C-terminal domain KAM339_044190 PF00107 Zinc-binding dehydrogenase KAM339_044190 PF08240 Alcohol dehydrogenase GroES-like domain KAM339_044200 PF00174 Oxidoreductase molybdopterin binding domain KAM339_044210 PF00111 2Fe-2S iron-sulfur cluster binding domain KAM339_044210 PF00175 Oxidoreductase NAD-binding domain KAM339_044210 PF00970 Oxidoreductase FAD-binding domain KAM339_044220 PF02803 Thiolase, C-terminal domain KAM339_044220 PF00108 Thiolase, N-terminal domain KAM339_044230 PF00462 Glutaredoxin KAM339_044260 PF13700 Domain of unknown function (DUF4158) KAM339_044260 PF01526 Tn3 transposase DDE domain KAM339_044460 PF02899 Phage integrase, N-terminal SAM-like domain KAM339_044460 PF00589 Phage integrase family KAM339_044470 PF01381 Helix-turn-helix KAM339_044480 PF13657 HipA N-terminal domain KAM339_044480 PF07804 HipA-like C-terminal domain KAM339_044500 PF00665 Integrase core domain KAM339_044510 PF01695 IstB-like ATP binding protein KAM339_044530 PF05638 Type VI secretion system effector, Hcp KAM339_044550 PF04717 Type VI secretion system, phage-baseplate injector KAM339_044630 PF13808 DDE_Tnp_1-associated KAM339_044630 PF01609 Transposase DDE domain KAM339_044660 PF02463 RecF/RecN/SMC N terminal domain KAM339_044690 PF01527 Transposase KAM339_044740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_044740 PF00672 HAMP domain KAM339_044740 PF12729 Four helix bundle sensory module for signal transduction KAM339_044750 PF01609 Transposase DDE domain KAM339_044750 PF05598 Transposase domain (DUF772) KAM339_044770 PF01695 IstB-like ATP binding protein KAM339_044780 PF00665 Integrase core domain KAM339_044820 PF06122 Conjugative relaxosome accessory transposon protein KAM339_044960 PF07042 TrfA protein KAM339_044980 PF00239 Resolvase, N terminal domain KAM339_044980 PF02796 Helix-turn-helix domain of resolvase KAM339_045030 PF09278 MerR, DNA binding KAM339_045030 PF00376 MerR family regulatory protein KAM339_045060 PF03230 Antirestriction protein KAM339_045090 PF17383 Uncharacterized KorC regulated protein A KAM339_045100 PF10892 Protein of unknown function (DUF2688) KAM339_045110 PF17394 Uncharacterized KleE stable inheritance protein KAM339_045120 PF10959 Protein of unknown function (DUF2761) KAM339_045130 PF16509 TrfB plasmid transcriptional repressor KAM339_045140 PF13614 AAA domain KAM339_045150 PF08535 KorB domain KAM339_045150 PF06613 KorB C-terminal beta-barrel domain KAM339_045150 PF02195 ParB-like nuclease domain KAM339_045160 PF11740 Plasmid replication region DNA-binding N-term KAM339_045190 PF11657 Transcriptional activator TraM KAM339_045200 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KAM339_045210 PF17273 Family of unknown function (DUF5338) KAM339_045230 PF18821 Large polyvalent protein-associated domain 7 KAM339_045230 PF03432 Relaxase/Mobilisation nuclease domain KAM339_045240 PF02534 Type IV secretory system Conjugative DNA transfer KAM339_045250 PF10502 Signal peptidase, peptidase S26 KAM339_045260 PF01131 DNA topoisomerase KAM339_045260 PF01751 Toprim domain KAM339_045280 PF13362 Toprim domain KAM339_045280 PF18818 Metallopeptidase superfamily domain KAM339_045280 PF08401 Domain of unknown function (DUF1738) KAM339_045290 PF13495 Phage integrase, N-terminal SAM-like domain KAM339_045290 PF00589 Phage integrase family KAM339_045300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KAM339_045350 PF00893 Small Multidrug Resistance protein KAM339_045360 PF00893 Small Multidrug Resistance protein KAM339_045370 PF00809 Pterin binding enzyme KAM339_045500 PF00239 Resolvase, N terminal domain KAM339_045500 PF02796 Helix-turn-helix domain of resolvase KAM339_045600 PF03743 Bacterial conjugation TrbI-like protein KAM339_045620 PF03524 Conjugal transfer protein KAM339_045640 PF03135 CagE, TrbE, VirB family, component of type IV transporter system KAM339_045650 PF05101 Type IV secretory pathway, VirB3-like protein KAM339_045660 PF04956 TrbC/VIRB2 family KAM339_045670 PF00437 Type II/IV secretion system protein KAM339_045680 PF16509 TrfB plasmid transcriptional repressor KAM339_045690 PF00436 Single-strand binding protein family KAM339_045710 PF17841 BID domain of Bartonella effector protein (Bep) KAM339_045710 PF03389 MobA/MobL family KAM339_045710 PF01443 Viral (Superfamily 1) RNA helicase KAM339_045720 PF07820 TraC-like protein KAM339_045740 PF02534 Type IV secretory system Conjugative DNA transfer KAM339_045760 PF00565 Staphylococcal nuclease homologue KAM339_045770 PF11740 Plasmid replication region DNA-binding N-term KAM339_045800 PF00376 MerR family regulatory protein KAM339_045800 PF13614 AAA domain KAM339_045820 PF00239 Resolvase, N terminal domain KAM339_045820 PF02796 Helix-turn-helix domain of resolvase KAM339_045830 PF00589 Phage integrase family KAM339_045830 PF13495 Phage integrase, N-terminal SAM-like domain KAM339_045860 PF02796 Helix-turn-helix domain of resolvase KAM339_045860 PF00239 Resolvase, N terminal domain KAM339_045890 PF00730 HhH-GPD superfamily base excision DNA repair protein KAM339_045920 PF13180 PDZ domain KAM339_045990 PF01609 Transposase DDE domain KAM339_045990 PF05598 Transposase domain (DUF772) KAM339_046000 PF08447 PAS fold KAM339_046000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KAM339_046070 PF05713 Bacterial mobilisation protein (MobC) KAM339_046090 PF04837 MbeB-like, N-term conserved region KAM339_046100 PF04899 MbeD/MobD like KAM339_046120 PF00990 Diguanylate cyclase, GGDEF domain KAM339_046200 PF03389 MobA/MobL family KAM339_046200 PF16793 RepB DNA-primase from phage plasmid KAM339_046210 PF05713 Bacterial mobilisation protein (MobC)