locus-tag class description L1871_00005 PF00308 Bacterial dnaA protein L1871_00005 PF08299 Bacterial dnaA protein helix-turn-helix L1871_00005 PF11638 DnaA N-terminal domain L1871_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain L1871_00010 PF02767 DNA polymerase III beta subunit, central domain L1871_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain L1871_00015 PF02463 RecF/RecN/SMC N terminal domain L1871_00020 PF00204 DNA gyrase B L1871_00020 PF00986 DNA gyrase B subunit, carboxyl terminus L1871_00020 PF18053 DNA gyrase B subunit insert domain L1871_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_00020 PF01751 Toprim domain L1871_00025 PF12833 Helix-turn-helix domain L1871_00025 PF02311 AraC-like ligand binding domain L1871_00030 PF12706 Beta-lactamase superfamily domain L1871_00035 PF00011 Hsp20/alpha crystallin family L1871_00040 PF00011 Hsp20/alpha crystallin family L1871_00045 PF00155 Aminotransferase class I and II L1871_00060 PF07690 Major Facilitator Superfamily L1871_00065 PF00072 Response regulator receiver domain L1871_00065 PF00486 Transcriptional regulatory protein, C terminal L1871_00070 PF13493 Domain of unknown function (DUF4118) L1871_00070 PF13492 GAF domain L1871_00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_00070 PF00512 His Kinase A (phospho-acceptor) domain L1871_00070 PF02702 Osmosensitive K+ channel His kinase sensor domain L1871_00075 PF02669 K+-transporting ATPase, c chain L1871_00085 PF03814 Potassium-transporting ATPase A subunit L1871_00090 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1871_00090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L1871_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_00095 PF00512 His Kinase A (phospho-acceptor) domain L1871_00095 PF00497 Bacterial extracellular solute-binding proteins, family 3 L1871_00100 PF00873 AcrB/AcrD/AcrF family L1871_00105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1871_00110 PF00440 Bacterial regulatory proteins, tetR family L1871_00145 PF12146 Serine aminopeptidase, S33 L1871_00150 PF12105 SpoU, rRNA methylase, C-terminal L1871_00150 PF00588 SpoU rRNA Methylase family L1871_00155 PF02824 TGS domain L1871_00155 PF04607 Region found in RelA / SpoT proteins L1871_00155 PF13291 ACT domain L1871_00160 PF01192 RNA polymerase Rpb6 L1871_00165 PF00625 Guanylate kinase L1871_00170 PF01075 Glycosyltransferase family 9 (heptosyltransferase) L1871_00185 PF00892 EamA-like transporter family L1871_00205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_00205 PF03466 LysR substrate binding domain L1871_00210 PF00579 tRNA synthetases class I (W and Y) L1871_00215 PF00582 Universal stress protein family L1871_00220 PF07055 Enoyl reductase FAD binding domain L1871_00220 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase L1871_00220 PF12241 Trans-2-enoyl-CoA reductase catalytic region L1871_00225 PF00990 Diguanylate cyclase, GGDEF domain L1871_00225 PF05230 MASE2 domain L1871_00230 PF00210 Ferritin-like domain L1871_00240 PF07690 Major Facilitator Superfamily L1871_00245 PF01810 LysE type translocator L1871_00260 PF01609 Transposase DDE domain L1871_00260 PF05598 Transposase domain (DUF772) L1871_00265 PF01609 Transposase DDE domain L1871_00265 PF05598 Transposase domain (DUF772) L1871_00275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_00275 PF00512 His Kinase A (phospho-acceptor) domain L1871_00275 PF01627 Hpt domain L1871_00275 PF00989 PAS fold L1871_00275 PF00072 Response regulator receiver domain L1871_00275 PF00497 Bacterial extracellular solute-binding proteins, family 3 L1871_00280 PF00072 Response regulator receiver domain L1871_00280 PF00512 His Kinase A (phospho-acceptor) domain L1871_00280 PF01627 Hpt domain L1871_00280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_00280 PF00989 PAS fold L1871_00280 PF00497 Bacterial extracellular solute-binding proteins, family 3 L1871_00285 PF07694 5TMR of 5TMR-LYT L1871_00285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_00285 PF06580 Histidine kinase L1871_00290 PF04397 LytTr DNA-binding domain L1871_00290 PF00072 Response regulator receiver domain L1871_00295 PF07690 Major Facilitator Superfamily L1871_00300 PF02222 ATP-grasp domain L1871_00300 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain L1871_00305 PF00731 AIR carboxylase L1871_00310 PF07715 TonB-dependent Receptor Plug Domain L1871_00310 PF00593 TonB dependent receptor L1871_00315 PF01177 Asp/Glu/Hydantoin racemase L1871_00350 PF00899 ThiF family L1871_00355 PF02657 Fe-S metabolism associated domain L1871_00360 PF00266 Aminotransferase class-V L1871_00365 PF13361 UvrD-like helicase C-terminal domain L1871_00365 PF00580 UvrD/REP helicase N-terminal domain L1871_00370 PF03707 Bacterial signalling protein N terminal repeat L1871_00370 PF00563 EAL domain L1871_00370 PF00990 Diguanylate cyclase, GGDEF domain L1871_00375 PF13442 Cytochrome C oxidase, cbb3-type, subunit III L1871_00380 PF00107 Zinc-binding dehydrogenase L1871_00380 PF08240 Alcohol dehydrogenase GroES-like domain L1871_00385 PF00155 Aminotransferase class I and II L1871_00390 PF08360 QacR-like protein, C-terminal region L1871_00390 PF00440 Bacterial regulatory proteins, tetR family L1871_00395 PF01370 NAD dependent epimerase/dehydratase family L1871_00405 PF04932 O-Antigen ligase L1871_00425 PF03611 PTS system sugar-specific permease component L1871_00435 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L1871_00440 PF00356 Bacterial regulatory proteins, lacI family L1871_00440 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family L1871_00455 PF03748 Flagellar basal body-associated protein FliL L1871_00460 PF04345 Chorismate lyase L1871_00465 PF01040 UbiA prenyltransferase family L1871_00470 PF01553 Acyltransferase L1871_00475 PF00717 Peptidase S24-like L1871_00475 PF01726 LexA DNA binding domain L1871_00485 PF02630 SCO1/SenC L1871_00490 PF01554 MatE L1871_00495 PF00588 SpoU rRNA Methylase family L1871_00500 PF16527 Two-component sensor protein CpxA, periplasmic domain L1871_00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_00500 PF00512 His Kinase A (phospho-acceptor) domain L1871_00500 PF00672 HAMP domain L1871_00505 PF00072 Response regulator receiver domain L1871_00505 PF00486 Transcriptional regulatory protein, C terminal L1871_00510 PF01545 Cation efflux family L1871_00510 PF16916 Dimerisation domain of Zinc Transporter L1871_00515 PF00132 Bacterial transferase hexapeptide (six repeats) L1871_00515 PF06426 Serine acetyltransferase, N-terminal L1871_00525 PF06005 Cell division protein ZapB L1871_00535 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L1871_00535 PF01367 5'-3' exonuclease, C-terminal SAM fold L1871_00535 PF00476 DNA polymerase family A L1871_00535 PF01612 3'-5' exonuclease L1871_00540 PF00132 Bacterial transferase hexapeptide (six repeats) L1871_00575 PF00356 Bacterial regulatory proteins, lacI family L1871_00580 PF02929 Beta galactosidase small chain L1871_00580 PF16353 Domain of unknown function(DUF4981) L1871_00580 PF00703 Glycosyl hydrolases family 2 L1871_00580 PF02836 Glycosyl hydrolases family 2, TIM barrel domain L1871_00580 PF02837 Glycosyl hydrolases family 2, sugar binding domain L1871_00585 PF04074 YhcH/YjgK/YiaL L1871_00590 PF13520 Amino acid permease L1871_00595 PF13593 SBF-like CPA transporter family (DUF4137) L1871_00600 PF12867 DinB superfamily L1871_00600 PF03781 Sulfatase-modifying factor enzyme 1 L1871_00615 PF00756 Putative esterase L1871_00620 PF00107 Zinc-binding dehydrogenase L1871_00620 PF08240 Alcohol dehydrogenase GroES-like domain L1871_00625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_00625 PF03466 LysR substrate binding domain L1871_00640 PF02653 Branched-chain amino acid transport system / permease component L1871_00645 PF02653 Branched-chain amino acid transport system / permease component L1871_00650 PF00005 ABC transporter L1871_00655 PF02608 ABC transporter substrate-binding protein PnrA-like L1871_00670 PF00580 UvrD/REP helicase N-terminal domain L1871_00670 PF13361 UvrD-like helicase C-terminal domain L1871_00675 PF01609 Transposase DDE domain L1871_00675 PF05598 Transposase domain (DUF772) L1871_00710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_00710 PF03466 LysR substrate binding domain L1871_00725 PF14001 YdfZ protein L1871_00745 PF13006 Insertion element 4 transposase N-terminal L1871_00745 PF01609 Transposase DDE domain L1871_00755 PF03466 LysR substrate binding domain L1871_00755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_00760 PF01810 LysE type translocator L1871_00765 PF06206 CpeT/CpcT family (DUF1001) L1871_00770 PF01810 LysE type translocator L1871_00775 PF12833 Helix-turn-helix domain L1871_00780 PF00892 EamA-like transporter family L1871_00790 PF00171 Aldehyde dehydrogenase family L1871_00795 PF07883 Cupin domain L1871_00795 PF01381 Helix-turn-helix L1871_00800 PF00202 Aminotransferase class-III L1871_00805 PF00171 Aldehyde dehydrogenase family L1871_00810 PF02540 NAD synthase L1871_00810 PF00958 GMP synthase C terminal domain L1871_00810 PF00117 Glutamine amidotransferase class-I L1871_00815 PF03466 LysR substrate binding domain L1871_00815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_00820 PF00294 pfkB family carbohydrate kinase L1871_00825 PF02082 Transcriptional regulator L1871_00840 PF02646 RmuC family L1871_00845 PF02386 Cation transport protein L1871_00850 PF02080 TrkA-C domain L1871_00850 PF02254 TrkA-N domain L1871_00855 PF01029 NusB family L1871_00855 PF01189 16S rRNA methyltransferase RsmB/F L1871_00860 PF02911 Formyl transferase, C-terminal domain L1871_00860 PF00551 Formyl transferase L1871_00865 PF01327 Polypeptide deformylase L1871_00875 PF02481 DNA recombination-mediator protein A L1871_00875 PF17782 DprA winged helix domain L1871_00880 PF04361 Protein of unknown function (DUF494) L1871_00885 PF01396 Topoisomerase DNA binding C4 zinc finger L1871_00890 PF01300 Telomere recombination L1871_00895 PF01218 Coproporphyrinogen III oxidase L1871_00900 PF08501 Shikimate dehydrogenase substrate binding domain L1871_00900 PF01488 Shikimate / quinate 5-dehydrogenase L1871_00900 PF18317 Shikimate 5'-dehydrogenase C-terminal domain L1871_00905 PF01926 50S ribosome-binding GTPase L1871_00910 PF00034 Cytochrome c L1871_00915 PF04220 Der GTPase activator (YihI) L1871_00920 PF10675 Protein of unknown function (DUF2489) L1871_00925 PF04055 Radical SAM superfamily L1871_00925 PF06969 HemN C-terminal domain L1871_00930 PF00962 Adenosine/AMP deaminase L1871_00935 PF00158 Sigma-54 interaction domain L1871_00935 PF00072 Response regulator receiver domain L1871_00935 PF02954 Bacterial regulatory protein, Fis family L1871_00940 PF00989 PAS fold L1871_00940 PF00512 His Kinase A (phospho-acceptor) domain L1871_00940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_00950 PF03951 Glutamine synthetase, beta-Grasp domain L1871_00950 PF00120 Glutamine synthetase, catalytic domain L1871_00955 PF00679 Elongation factor G C-terminus L1871_00955 PF00009 Elongation factor Tu GTP binding domain L1871_00955 PF03144 Elongation factor Tu domain 2 L1871_00960 PF03631 Virulence factor BrkB L1871_00965 PF02580 D-Tyr-tRNA(Tyr) deacylase L1871_00975 PF09500 Putative thioesterase (yiiD_Cterm) L1871_00975 PF00583 Acetyltransferase (GNAT) family L1871_00985 PF17191 RecG wedge domain L1871_00985 PF00270 DEAD/DEAH box helicase L1871_00985 PF00271 Helicase conserved C-terminal domain L1871_00990 PF13091 PLD-like domain L1871_00995 PF02447 GntP family permease L1871_01000 PF01202 Shikimate kinase L1871_01005 PF00920 Dehydratase family L1871_01010 PF01081 KDPG and KHG aldolase L1871_01025 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family L1871_01025 PF00356 Bacterial regulatory proteins, lacI family L1871_01035 PF01551 Peptidase family M23 L1871_01040 PF01676 Metalloenzyme superfamily L1871_01040 PF06415 BPG-independent PGAM N-terminus (iPGM_N) L1871_01045 PF00581 Rhodanese-like domain L1871_01050 PF02556 Preprotein translocase subunit SecB L1871_01055 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus L1871_01055 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus L1871_01060 PF01521 Iron-sulphur cluster biosynthesis L1871_01060 PF01106 NifU-like domain L1871_01065 PF00156 Phosphoribosyl transferase domain L1871_01070 PF00561 alpha/beta hydrolase fold L1871_01085 PF17674 HHH domain L1871_01085 PF00575 S1 RNA binding domain L1871_01085 PF09371 Tex-like protein N-terminal domain L1871_01085 PF16921 Tex protein YqgF-like domain L1871_01090 PF03449 Transcription elongation factor, N-terminal L1871_01090 PF01272 Transcription elongation factor, GreA/GreB, C-term L1871_01095 PF00072 Response regulator receiver domain L1871_01095 PF00486 Transcriptional regulatory protein, C terminal L1871_01100 PF00672 HAMP domain L1871_01100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_01100 PF00512 His Kinase A (phospho-acceptor) domain L1871_01110 PF00338 Ribosomal protein S10p/S20e L1871_01115 PF00297 Ribosomal protein L3 L1871_01120 PF00573 Ribosomal protein L4/L1 family L1871_01125 PF00276 Ribosomal protein L23 L1871_01130 PF00181 Ribosomal Proteins L2, RNA binding domain L1871_01130 PF03947 Ribosomal Proteins L2, C-terminal domain L1871_01135 PF00203 Ribosomal protein S19 L1871_01140 PF00237 Ribosomal protein L22p/L17e L1871_01145 PF00189 Ribosomal protein S3, C-terminal domain L1871_01145 PF07650 KH domain L1871_01150 PF00252 Ribosomal protein L16p/L10e L1871_01155 PF00831 Ribosomal L29 protein L1871_01160 PF00366 Ribosomal protein S17 L1871_01165 PF00238 Ribosomal protein L14p/L23e L1871_01170 PF00467 KOW motif L1871_01170 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 L1871_01175 PF00281 Ribosomal protein L5 L1871_01175 PF00673 ribosomal L5P family C-terminus L1871_01180 PF00253 Ribosomal protein S14p/S29e L1871_01185 PF00410 Ribosomal protein S8 L1871_01190 PF00347 Ribosomal protein L6 L1871_01195 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast L1871_01200 PF00333 Ribosomal protein S5, N-terminal domain L1871_01200 PF03719 Ribosomal protein S5, C-terminal domain L1871_01205 PF00327 Ribosomal protein L30p/L7e L1871_01210 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A L1871_01215 PF00344 SecY translocase L1871_01220 PF00444 Ribosomal protein L36 L1871_01225 PF00416 Ribosomal protein S13/S18 L1871_01230 PF00411 Ribosomal protein S11 L1871_01235 PF00163 Ribosomal protein S4/S9 N-terminal domain L1871_01235 PF01479 S4 domain L1871_01240 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain L1871_01240 PF01000 RNA polymerase Rpb3/RpoA insert domain L1871_01240 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain L1871_01245 PF01196 Ribosomal protein L17 L1871_01310 PF02254 TrkA-N domain L1871_01310 PF00999 Sodium/hydrogen exchanger family L1871_01315 PF02525 Flavodoxin-like fold L1871_01320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_01320 PF03466 LysR substrate binding domain L1871_01325 PF00106 short chain dehydrogenase L1871_01340 PF00326 Prolyl oligopeptidase family L1871_01340 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain L1871_01345 PF16868 NMT1-like family L1871_01360 PF07947 YhhN family L1871_01365 PF07690 Major Facilitator Superfamily L1871_01370 PF13533 Biotin-lipoyl like L1871_01375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_01375 PF03466 LysR substrate binding domain L1871_01385 PF00375 Sodium:dicarboxylate symporter family L1871_01390 PF10678 Protein of unknown function (DUF2492) L1871_01395 PF01914 MarC family integral membrane protein L1871_01400 PF03466 LysR substrate binding domain L1871_01400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_01405 PF02416 mttA/Hcf106 family L1871_01415 PF01464 Transglycosylase SLT domain L1871_01415 PF00497 Bacterial extracellular solute-binding proteins, family 3 L1871_01425 PF13091 PLD-like domain L1871_01435 PF00440 Bacterial regulatory proteins, tetR family L1871_01440 PF07226 Protein of unknown function (DUF1422) L1871_01455 PF00448 SRP54-type protein, GTPase domain L1871_01455 PF02881 SRP54-type protein, helical bundle domain L1871_01460 PF00005 ABC transporter L1871_01465 PF18075 FtsX extracellular domain L1871_01470 PF00140 Sigma-70 factor, region 1.2 L1871_01470 PF04542 Sigma-70 region 2 L1871_01470 PF04545 Sigma-70, region 4 L1871_01475 PF00484 Carbonic anhydrase L1871_01480 PF00392 Bacterial regulatory proteins, gntR family L1871_01480 PF07702 UTRA domain L1871_01485 PF01979 Amidohydrolase family L1871_01490 PF00491 Arginase family L1871_01495 PF17392 Urocanase C-terminal domain L1871_01495 PF17391 Urocanase N-terminal domain L1871_01495 PF01175 Urocanase Rossmann-like domain L1871_01500 PF00221 Aromatic amino acid lyase L1871_01505 PF01699 Sodium/calcium exchanger protein L1871_01510 PF12792 CSS motif domain associated with EAL L1871_01510 PF00563 EAL domain L1871_01545 PF00263 Bacterial type II and III secretion system protein L1871_01545 PF03958 Bacterial type II/III secretion system short domain L1871_01565 PF00437 Type II/IV secretion system protein L1871_01565 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain L1871_01570 PF00482 Type II secretion system (T2SS), protein F L1871_01585 PF07963 Prokaryotic N-terminal methylation motif L1871_01585 PF08334 Type II secretion system (T2SS), protein G L1871_01590 PF07963 Prokaryotic N-terminal methylation motif L1871_01590 PF00114 Pilin (bacterial filament) L1871_01620 PF04085 rod shape-determining protein MreC L1871_01625 PF04093 rod shape-determining protein MreD L1871_01630 PF02545 Maf-like protein L1871_01635 PF00575 S1 RNA binding domain L1871_01635 PF10150 Ribonuclease E/G family L1871_01640 PF13502 AsmA-like C-terminal region L1871_01640 PF13116 Protein of unknown function L1871_01645 PF00795 Carbon-nitrogen hydrolase L1871_01650 PF01523 Putative modulator of DNA gyrase L1871_01660 PF01914 MarC family integral membrane protein L1871_01665 PF07690 Major Facilitator Superfamily L1871_01675 PF04228 Putative neutral zinc metallopeptidase L1871_01695 PF00999 Sodium/hydrogen exchanger family L1871_01700 PF02574 Homocysteine S-methyltransferase L1871_01700 PF00809 Pterin binding enzyme L1871_01700 PF02965 Vitamin B12 dependent methionine synthase, activation domain L1871_01700 PF02607 B12 binding domain L1871_01700 PF02310 B12 binding domain L1871_01710 PF08443 RimK-like ATP-grasp domain L1871_01710 PF18030 RimK PreATP-grasp domain L1871_01715 PF01609 Transposase DDE domain L1871_01715 PF13006 Insertion element 4 transposase N-terminal L1871_01720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_01725 PF00072 Response regulator receiver domain L1871_01725 PF00486 Transcriptional regulatory protein, C terminal L1871_01740 PF13667 ThiC-associated domain L1871_01740 PF01964 Radical SAM ThiC family L1871_01745 PF02581 Thiamine monophosphate synthase L1871_01750 PF00899 ThiF family L1871_01760 PF05690 Thiazole biosynthesis protein ThiG L1871_01765 PF06968 Biotin and Thiamin Synthesis associated domain L1871_01765 PF04055 Radical SAM superfamily L1871_01805 PF13036 Peptidoglycan-synthase activator LpoB L1871_01810 PF00990 Diguanylate cyclase, GGDEF domain L1871_01815 PF06055 Exopolysaccharide synthesis, ExoD L1871_01825 PF08803 Putative mono-oxygenase ydhR L1871_01830 PF01638 HxlR-like helix-turn-helix L1871_01835 PF00583 Acetyltransferase (GNAT) family L1871_01835 PF13508 Acetyltransferase (GNAT) domain L1871_01850 PF07715 TonB-dependent Receptor Plug Domain L1871_01850 PF00593 TonB dependent receptor L1871_01860 PF08241 Methyltransferase domain L1871_01865 PF00267 Gram-negative porin L1871_01870 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded L1871_01875 PF03692 Putative zinc- or iron-chelating domain L1871_01880 PF07219 HemY protein N-terminus L1871_01880 PF07719 Tetratricopeptide repeat L1871_01885 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase L1871_01890 PF02602 Uroporphyrinogen-III synthase HemD L1871_01895 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain L1871_01895 PF03900 Porphobilinogen deaminase, C-terminal domain L1871_01900 PF01295 Adenylate cyclase, class-I L1871_01900 PF12633 Adenylate cyclase NT domain L1871_01905 PF02230 Phospholipase/Carboxylesterase L1871_01910 PF01491 Frataxin-like domain L1871_01920 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain L1871_01920 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain L1871_01925 PF01678 Diaminopimelate epimerase L1871_01935 PF02899 Phage integrase, N-terminal SAM-like domain L1871_01935 PF00589 Phage integrase family L1871_01940 PF13419 Haloacid dehalogenase-like hydrolase L1871_01950 PF07722 Peptidase C26 L1871_01965 PF04307 LexA-binding, inner membrane-associated putative hydrolase L1871_01970 PF02464 Competence-damaged protein L1871_01970 PF00994 Probable molybdopterin binding domain L1871_01980 PF04204 Homoserine O-succinyltransferase L1871_01990 PF01037 Lrp/AsnC ligand binding domain L1871_01995 PF00884 Sulfatase L1871_02005 PF00128 Alpha amylase, catalytic domain L1871_02005 PF02903 Alpha amylase, N-terminal ig-like domain L1871_02005 PF16657 Maltogenic Amylase, C-terminal domain L1871_02010 PF02308 MgtC family L1871_02030 PF00106 short chain dehydrogenase L1871_02045 PF00465 Iron-containing alcohol dehydrogenase L1871_02055 PF01053 Cys/Met metabolism PLP-dependent enzyme L1871_02065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L1871_02065 PF12793 Sugar transport-related sRNA regulator N-term L1871_02085 PF00561 alpha/beta hydrolase fold L1871_02095 PF02777 Iron/manganese superoxide dismutases, C-terminal domain L1871_02095 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain L1871_02100 PF02698 DUF218 domain L1871_02105 PF01752 Collagenase L1871_02105 PF08453 Peptidase family M9 N-terminal L1871_02110 PF00501 AMP-binding enzyme L1871_02110 PF13193 AMP-binding enzyme C-terminal domain L1871_02115 PF13378 Enolase C-terminal domain-like L1871_02120 PF00378 Enoyl-CoA hydratase/isomerase L1871_02125 PF12697 Alpha/beta hydrolase family L1871_02130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L1871_02130 PF16582 Middle domain of thiamine pyrophosphate L1871_02130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L1871_02135 PF00425 chorismate binding enzyme L1871_02140 PF01040 UbiA prenyltransferase family L1871_02160 PF03880 DbpA RNA binding domain L1871_02160 PF00270 DEAD/DEAH box helicase L1871_02160 PF00271 Helicase conserved C-terminal domain L1871_02165 PF07670 Nucleoside recognition L1871_02165 PF07662 Na+ dependent nucleoside transporter C-terminus L1871_02165 PF01773 Na+ dependent nucleoside transporter N-terminus L1871_02180 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 L1871_02185 PF01544 CorA-like Mg2+ transporter protein L1871_02200 PF03471 Transporter associated domain L1871_02200 PF00999 Sodium/hydrogen exchanger family L1871_02200 PF02080 TrkA-C domain L1871_02205 PF05068 Mannitol repressor L1871_02210 PF01232 Mannitol dehydrogenase Rossmann domain L1871_02210 PF08125 Mannitol dehydrogenase C-terminal domain L1871_02215 PF02378 Phosphotransferase system, EIIC L1871_02215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L1871_02215 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L1871_02220 PF17876 Cold shock domain L1871_02220 PF08206 Ribonuclease B OB domain L1871_02220 PF00773 RNB domain L1871_02225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_02225 PF03466 LysR substrate binding domain L1871_02230 PF00765 Autoinducer synthase L1871_02235 PF00196 Bacterial regulatory proteins, luxR family L1871_02235 PF03472 Autoinducer binding domain L1871_02240 PF01810 LysE type translocator L1871_02245 PF00149 Calcineurin-like phosphoesterase L1871_02245 PF02872 5'-nucleotidase, C-terminal domain L1871_02250 PF03279 Bacterial lipid A biosynthesis acyltransferase L1871_02255 PF01467 Cytidylyltransferase-like L1871_02255 PF00294 pfkB family carbohydrate kinase L1871_02260 PF02321 Outer membrane efflux protein L1871_02265 PF00293 NUDIX domain L1871_02270 PF06853 Protein of unknown function (DUF1249) L1871_02275 PF00149 Calcineurin-like phosphoesterase L1871_02280 PF05728 Uncharacterised protein family (UPF0227) L1871_02285 PF00293 NUDIX domain L1871_02295 PF07869 Protein of unknown function (DUF1656) L1871_02300 PF00529 HlyD membrane-fusion protein of T1SS L1871_02300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1871_02305 PF04632 Fusaric acid resistance protein family L1871_02310 PF00204 DNA gyrase B L1871_02310 PF00986 DNA gyrase B subunit, carboxyl terminus L1871_02310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_02310 PF01751 Toprim domain L1871_02315 PF03989 DNA gyrase C-terminal domain, beta-propeller L1871_02315 PF00521 DNA gyrase/topoisomerase IV, subunit A L1871_02320 PF01609 Transposase DDE domain L1871_02320 PF05598 Transposase domain (DUF772) L1871_02360 PF00684 DnaJ central domain L1871_02360 PF01556 DnaJ C terminal domain L1871_02360 PF00226 DnaJ domain L1871_02370 PF00578 AhpC/TSA family L1871_02390 PF01553 Acyltransferase L1871_02395 PF04012 PspA/IM30 family L1871_02410 PF01541 GIY-YIG catalytic domain L1871_02415 PF00892 EamA-like transporter family L1871_02420 PF03167 Uracil DNA glycosylase superfamily L1871_02430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_02430 PF03466 LysR substrate binding domain L1871_02435 PF00950 ABC 3 transport family L1871_02440 PF00005 ABC transporter L1871_02445 PF01297 Zinc-uptake complex component A periplasmic L1871_02465 PF01476 LysM domain L1871_02465 PF01551 Peptidase family M23 L1871_02465 PF08525 Opacity-associated protein A N-terminal motif L1871_02470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L1871_02475 PF04222 Protein of unknown function (DUF416) L1871_02495 PF02028 BCCT, betaine/carnitine/choline family transporter L1871_02500 PF01624 MutS domain I L1871_02500 PF05188 MutS domain II L1871_02500 PF05192 MutS domain III L1871_02500 PF05190 MutS family domain IV L1871_02500 PF00488 MutS domain V L1871_02510 PF02464 Competence-damaged protein L1871_02515 PF00154 recA bacterial DNA recombination protein L1871_02520 PF02631 RecX family L1871_02525 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L1871_02525 PF01411 tRNA synthetases class II (A) L1871_02525 PF02272 DHHA1 domain L1871_02530 PF00696 Amino acid kinase family L1871_02530 PF13840 ACT domain L1871_02530 PF01842 ACT domain L1871_02535 PF02599 Global regulator protein family L1871_02570 PF00768 D-alanyl-D-alanine carboxypeptidase L1871_02580 PF09335 SNARE associated Golgi protein L1871_02585 PF00571 CBS domain L1871_02585 PF03471 Transporter associated domain L1871_02585 PF01595 Cyclin M transmembrane N-terminal domain L1871_02590 PF08264 Anticodon-binding domain of tRNA L1871_02590 PF00133 tRNA synthetases class I (I, L, M and V) L1871_02590 PF10458 Valyl tRNA synthetase tRNA binding arm L1871_02600 PF00883 Cytosol aminopeptidase family, catalytic domain L1871_02600 PF02789 Cytosol aminopeptidase family, N-terminal domain L1871_02605 PF03739 Lipopolysaccharide export system permease LptF/LptG L1871_02610 PF03739 Lipopolysaccharide export system permease LptF/LptG L1871_02630 PF00909 Ammonium Transporter Family L1871_02635 PF01938 TRAM domain L1871_02635 PF05958 tRNA (Uracil-5-)-methyltransferase L1871_02650 PF07963 Prokaryotic N-terminal methylation motif L1871_02655 PF01026 TatD related DNase L1871_02660 PF07670 Nucleoside recognition L1871_02660 PF01773 Na+ dependent nucleoside transporter N-terminus L1871_02660 PF07662 Na+ dependent nucleoside transporter C-terminus L1871_02670 PF01791 DeoC/LacD family aldolase L1871_02675 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain L1871_02675 PF00591 Glycosyl transferase family, a/b domain L1871_02675 PF02885 Glycosyl transferase family, helical bundle domain L1871_02680 PF01676 Metalloenzyme superfamily L1871_02685 PF01048 Phosphorylase superfamily L1871_02690 PF00563 EAL domain L1871_02690 PF00990 Diguanylate cyclase, GGDEF domain L1871_02690 PF03707 Bacterial signalling protein N terminal repeat L1871_02705 PF18429 Domain of unknown function (DUF5609) L1871_02720 PF18073 Rubredoxin metal binding domain L1871_02725 PF07238 PilZ domain L1871_02730 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ L1871_02735 PF00216 Bacterial DNA-binding protein L1871_02755 PF01207 Dihydrouridine synthase (Dus) L1871_02760 PF01475 Ferric uptake regulator family L1871_02775 PF05525 Branched-chain amino acid transport protein L1871_02780 PF05175 Methyltransferase small domain L1871_02785 PF00270 DEAD/DEAH box helicase L1871_02785 PF00271 Helicase conserved C-terminal domain L1871_02790 PF03883 Peroxide stress protein YaaA L1871_02795 PF00437 Type II/IV secretion system protein L1871_02800 PF00437 Type II/IV secretion system protein L1871_02805 PF01168 Alanine racemase, N-terminal domain L1871_02810 PF03807 NADP oxidoreductase coenzyme F420-dependent L1871_02810 PF14748 Pyrroline-5-carboxylate reductase dimerisation L1871_02815 PF02325 YGGT family L1871_02820 PF02594 Uncharacterised ACR, YggU family COG1872 L1871_02840 PF06062 Uncharacterised protein family (UPF0231) L1871_02845 PF13556 PucR C-terminal helix-turn-helix domain L1871_02845 PF17853 GGDEF-like domain L1871_02845 PF05651 Putative sugar diacid recognition L1871_02850 PF02447 GntP family permease L1871_02855 PF02595 Glycerate kinase family L1871_02865 PF00255 Glutathione peroxidase L1871_02870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_02870 PF03466 LysR substrate binding domain L1871_02875 PF07662 Na+ dependent nucleoside transporter C-terminus L1871_02875 PF01773 Na+ dependent nucleoside transporter N-terminus L1871_02875 PF07670 Nucleoside recognition L1871_02880 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain L1871_02880 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain L1871_02885 PF00472 RF-1 domain L1871_02890 PF00543 Nitrogen regulatory protein P-II L1871_02905 PF00005 ABC transporter L1871_02905 PF08402 TOBE domain L1871_02910 PF04261 Dyp-type peroxidase family L1871_02915 PF01316 Arginine repressor, DNA binding domain L1871_02915 PF02863 Arginine repressor, C-terminal domain L1871_02920 PF00005 ABC transporter L1871_02925 PF00497 Bacterial extracellular solute-binding proteins, family 3 L1871_02930 PF00528 Binding-protein-dependent transport system inner membrane component L1871_02935 PF00528 Binding-protein-dependent transport system inner membrane component L1871_02940 PF00056 lactate/malate dehydrogenase, NAD binding domain L1871_02940 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain L1871_02945 PF08238 Sel1 repeat L1871_02950 PF00970 Oxidoreductase FAD-binding domain L1871_02950 PF00175 Oxidoreductase NAD-binding domain L1871_02950 PF00042 Globin L1871_02955 PF02082 Transcriptional regulator L1871_02960 PF03471 Transporter associated domain L1871_02960 PF01595 Cyclin M transmembrane N-terminal domain L1871_02960 PF00571 CBS domain L1871_02965 PF01578 Cytochrome C assembly protein L1871_02970 PF00448 SRP54-type protein, GTPase domain L1871_02970 PF02881 SRP54-type protein, helical bundle domain L1871_02970 PF02978 Signal peptide binding domain L1871_02975 PF00886 Ribosomal protein S16 L1871_02980 PF05239 PRC-barrel domain L1871_02980 PF01782 RimM N-terminal domain L1871_02985 PF01746 tRNA (Guanine-1)-methyltransferase L1871_02990 PF01245 Ribosomal protein L19 L1871_03000 PF02976 DNA mismatch repair enzyme MutH L1871_03005 PF00293 NUDIX domain L1871_03010 PF01590 GAF domain L1871_03010 PF05524 PEP-utilising enzyme, N-terminal L1871_03010 PF00391 PEP-utilising enzyme, mobile domain L1871_03010 PF02896 PEP-utilising enzyme, TIM barrel domain L1871_03015 PF01790 Prolipoprotein diacylglyceryl transferase L1871_03020 PF00303 Thymidylate synthase L1871_03025 PF06965 Na+/H+ antiporter 1 L1871_03035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_03035 PF03466 LysR substrate binding domain L1871_03040 PF01022 Bacterial regulatory protein, arsR family L1871_03045 PF01649 Ribosomal protein S20 L1871_03050 PF03023 Lipid II flippase MurJ L1871_03055 PF06574 FAD synthetase L1871_03055 PF01687 Riboflavin kinase L1871_03060 PF08264 Anticodon-binding domain of tRNA L1871_03060 PF00133 tRNA synthetases class I (I, L, M and V) L1871_03060 PF06827 Zinc finger found in FPG and IleRS L1871_03065 PF01252 Signal peptidase (SPase) II L1871_03070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L1871_03075 PF02401 LytB protein L1871_03080 PF07963 Prokaryotic N-terminal methylation motif L1871_03080 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor L1871_03115 PF00795 Carbon-nitrogen hydrolase L1871_03115 PF02540 NAD synthase L1871_03120 PF00543 Nitrogen regulatory protein P-II L1871_03130 PF02664 S-Ribosylhomocysteinase (LuxS) L1871_03135 PF00990 Diguanylate cyclase, GGDEF domain L1871_03140 PF17876 Cold shock domain L1871_03140 PF08461 Ribonuclease R winged-helix domain L1871_03140 PF08206 Ribonuclease B OB domain L1871_03140 PF00773 RNB domain L1871_03140 PF00575 S1 RNA binding domain L1871_03145 PF00588 SpoU rRNA Methylase family L1871_03145 PF08032 RNA 2'-O ribose methyltransferase substrate binding L1871_03155 PF13673 Acetyltransferase (GNAT) domain L1871_03160 PF01411 tRNA synthetases class II (A) L1871_03160 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L1871_03160 PF02272 DHHA1 domain L1871_03165 PF01566 Natural resistance-associated macrophage protein L1871_03170 PF01250 Ribosomal protein S6 L1871_03175 PF01084 Ribosomal protein S18 L1871_03180 PF01281 Ribosomal protein L9, N-terminal domain L1871_03180 PF03948 Ribosomal protein L9, C-terminal domain L1871_03185 PF00970 Oxidoreductase FAD-binding domain L1871_03185 PF00175 Oxidoreductase NAD-binding domain L1871_03205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L1871_03215 PF00698 Acyl transferase domain L1871_03215 PF08240 Alcohol dehydrogenase GroES-like domain L1871_03215 PF08990 Erythronolide synthase docking L1871_03215 PF16197 Ketoacyl-synthetase C-terminal extension L1871_03215 PF00109 Beta-ketoacyl synthase, N-terminal domain L1871_03215 PF02801 Beta-ketoacyl synthase, C-terminal domain L1871_03215 PF14765 Polyketide synthase dehydratase L1871_03215 PF00550 Phosphopantetheine attachment site L1871_03215 PF08659 KR domain L1871_03220 PF09335 SNARE associated Golgi protein L1871_03225 PF05193 Peptidase M16 inactive domain L1871_03225 PF00675 Insulinase (Peptidase family M16) L1871_03230 PF04262 Glutamate-cysteine ligase L1871_03235 PF03605 Anaerobic c4-dicarboxylate membrane transporter L1871_03240 PF10415 Fumarase C C-terminus L1871_03240 PF00206 Lyase L1871_03245 PF04186 FxsA cytoplasmic membrane protein L1871_03250 PF01554 MatE L1871_03255 PF00166 Chaperonin 10 Kd subunit L1871_03260 PF00118 TCP-1/cpn60 chaperonin family L1871_03270 PF00990 Diguanylate cyclase, GGDEF domain L1871_03270 PF00563 EAL domain L1871_03270 PF03707 Bacterial signalling protein N terminal repeat L1871_03280 PF00849 RNA pseudouridylate synthase L1871_03285 PF00271 Helicase conserved C-terminal domain L1871_03285 PF12137 RNA polymerase recycling family C-terminal L1871_03285 PF00176 SNF2 family N-terminal domain L1871_03285 PF18337 RapA N-terminal Tudor like domain L1871_03285 PF18339 RapA N-terminal Tudor like domain 1 L1871_03345 PF00528 Binding-protein-dependent transport system inner membrane component L1871_03350 PF00528 Binding-protein-dependent transport system inner membrane component L1871_03355 PF00005 ABC transporter L1871_03355 PF12857 TOBE-like domain L1871_03360 PF03466 LysR substrate binding domain L1871_03360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_03365 PF18416 N-acetylglucosamine binding protein domain 2 L1871_03365 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading L1871_03370 PF00672 HAMP domain L1871_03370 PF17200 Single Cache domain 2 L1871_03370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_03395 PF11230 Protein of unknown function (DUF3029) L1871_03400 PF04055 Radical SAM superfamily L1871_03410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_03410 PF03466 LysR substrate binding domain L1871_03415 PF13006 Insertion element 4 transposase N-terminal L1871_03415 PF01609 Transposase DDE domain L1871_03420 PF00155 Aminotransferase class I and II L1871_03425 PF02583 Metal-sensitive transcriptional repressor L1871_03445 PF00403 Heavy-metal-associated domain L1871_03450 PF08534 Redoxin L1871_03455 PF00271 Helicase conserved C-terminal domain L1871_03455 PF00270 DEAD/DEAH box helicase L1871_03460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_03460 PF08447 PAS fold L1871_03470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L1871_03480 PF10952 Protein of unknown function (DUF2753) L1871_03485 PF00378 Enoyl-CoA hydratase/isomerase L1871_03500 PF00106 short chain dehydrogenase L1871_03505 PF00929 Exonuclease L1871_03510 PF03129 Anticodon binding domain L1871_03510 PF04073 Aminoacyl-tRNA editing domain L1871_03510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L1871_03520 PF07499 RuvA, C-terminal domain L1871_03520 PF01330 RuvA N terminal domain L1871_03525 PF05491 RuvB C-terminal winged helix domain L1871_03525 PF17864 RuvB AAA lid domain L1871_03525 PF05496 Holliday junction DNA helicase RuvB P-loop domain L1871_03535 PF01654 Cytochrome bd terminal oxidase subunit I L1871_03540 PF02322 Cytochrome bd terminal oxidase subunit II L1871_03545 PF08173 Membrane bound YbgT-like protein L1871_03550 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) L1871_03555 PF03061 Thioesterase superfamily L1871_03560 PF01618 MotA/TolQ/ExbB proton channel family L1871_03565 PF02472 Biopolymer transport protein ExbD/TolR L1871_03575 PF04052 TolB amino-terminal domain L1871_03575 PF07676 WD40-like Beta Propeller Repeat L1871_03580 PF00691 OmpA family L1871_03585 PF13174 Tetratricopeptide repeat L1871_03585 PF16331 TolA binding protein trimerisation L1871_03665 PF02445 Quinolinate synthetase A protein L1871_03670 PF01263 Aldose 1-epimerase L1871_03675 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain L1871_03675 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain L1871_03680 PF02446 4-alpha-glucanotransferase L1871_03685 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) L1871_03685 PF00128 Alpha amylase, catalytic domain L1871_03685 PF02806 Alpha amylase, C-terminal all-beta domain L1871_03690 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) L1871_03690 PF00128 Alpha amylase, catalytic domain L1871_03695 PF01641 SelR domain L1871_03710 PF00293 NUDIX domain L1871_03715 PF16884 N-terminal domain of oxidoreductase L1871_03715 PF00107 Zinc-binding dehydrogenase L1871_03720 PF01047 MarR family L1871_03735 PF01037 Lrp/AsnC ligand binding domain L1871_03745 PF07690 Major Facilitator Superfamily L1871_03765 PF00209 Sodium:neurotransmitter symporter family L1871_03770 PF00209 Sodium:neurotransmitter symporter family L1871_03785 PF00392 Bacterial regulatory proteins, gntR family L1871_03785 PF00155 Aminotransferase class I and II L1871_03800 PF01177 Asp/Glu/Hydantoin racemase L1871_03810 PF00501 AMP-binding enzyme L1871_03820 PF00583 Acetyltransferase (GNAT) family L1871_03830 PF07728 AAA domain (dynein-related subfamily) L1871_03830 PF17868 AAA lid domain L1871_03830 PF12592 Protein of unknown function (DUF3763) L1871_03835 PF05762 VWA domain containing CoxE-like protein L1871_03840 PF00563 EAL domain L1871_03840 PF00990 Diguanylate cyclase, GGDEF domain L1871_03840 PF08448 PAS fold L1871_03850 PF00990 Diguanylate cyclase, GGDEF domain L1871_03850 PF00072 Response regulator receiver domain L1871_03855 PF03144 Elongation factor Tu domain 2 L1871_03855 PF16658 Class II release factor RF3, C-terminal domain L1871_03855 PF00009 Elongation factor Tu GTP binding domain L1871_03865 PF01758 Sodium Bile acid symporter family L1871_03870 PF00583 Acetyltransferase (GNAT) family L1871_03875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family L1871_03885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_03885 PF03466 LysR substrate binding domain L1871_03890 PF04371 Porphyromonas-type peptidyl-arginine deiminase L1871_03895 PF01425 Amidase L1871_03925 PF00672 HAMP domain L1871_03925 PF12729 Four helix bundle sensory module for signal transduction L1871_03925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_03945 PF00005 ABC transporter L1871_03960 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) L1871_03975 PF00719 Inorganic pyrophosphatase L1871_03980 PF02875 Mur ligase family, glutamate ligase domain L1871_03980 PF01225 Mur ligase family, catalytic domain L1871_03980 PF08245 Mur ligase middle domain L1871_03985 PF02441 Flavoprotein L1871_03990 PF00440 Bacterial regulatory proteins, tetR family L1871_03995 PF00156 Phosphoribosyl transferase domain L1871_04000 PF00005 ABC transporter L1871_04005 PF01061 ABC-2 type transporter L1871_04015 PF02569 Pantoate-beta-alanine ligase L1871_04020 PF02548 Ketopantoate hydroxymethyltransferase L1871_04025 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) L1871_04030 PF01743 Poly A polymerase head domain L1871_04030 PF12626 Polymerase A arginine-rich C-terminus L1871_04030 PF12627 Probable RNA and SrmB- binding site of polymerase A L1871_04035 PF00749 tRNA synthetases class I (E and Q), catalytic domain L1871_04040 PF01258 Prokaryotic dksA/traR C4-type zinc finger L1871_04045 PF03749 Sugar fermentation stimulation protein RE domain L1871_04045 PF17746 SfsA N-terminal OB domain L1871_04055 PF00271 Helicase conserved C-terminal domain L1871_04055 PF08482 ATP-dependent helicase C-terminal L1871_04055 PF00270 DEAD/DEAH box helicase L1871_04055 PF04408 Helicase associated domain (HA2) L1871_04060 PF00912 Transglycosylase L1871_04060 PF00905 Penicillin binding protein transpeptidase domain L1871_04060 PF14814 Bifunctional transglycosylase second domain L1871_04065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L1871_04070 PF00893 Small Multidrug Resistance protein L1871_04075 PF00893 Small Multidrug Resistance protein L1871_04080 PF03466 LysR substrate binding domain L1871_04080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_04090 PF01569 PAP2 superfamily L1871_04105 PF00202 Aminotransferase class-III L1871_04110 PF00654 Voltage gated chloride channel L1871_04120 PF01521 Iron-sulphur cluster biosynthesis L1871_04150 PF01810 LysE type translocator L1871_04160 PF02954 Bacterial regulatory protein, Fis family L1871_04165 PF01207 Dihydrouridine synthase (Dus) L1871_04175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1871_04205 PF00072 Response regulator receiver domain L1871_04210 PF00854 POT family L1871_04215 PF00483 Nucleotidyl transferase L1871_04225 PF00459 Inositol monophosphatase family L1871_04230 PF03795 YCII-related domain L1871_04235 PF04279 Intracellular septation protein A L1871_04240 PF00282 Pyridoxal-dependent decarboxylase conserved domain L1871_04245 PF03006 Haemolysin-III related L1871_04250 PF02080 TrkA-C domain L1871_04250 PF06826 Predicted Permease Membrane Region L1871_04260 PF07690 Major Facilitator Superfamily L1871_04265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_04265 PF03466 LysR substrate binding domain L1871_04270 PF07504 Fungalysin/Thermolysin Propeptide Motif L1871_04270 PF03413 Peptidase propeptide and YPEB domain L1871_04270 PF01447 Thermolysin metallopeptidase, catalytic domain L1871_04270 PF02868 Thermolysin metallopeptidase, alpha-helical domain L1871_04270 PF04151 Bacterial pre-peptidase C-terminal domain L1871_04275 PF13302 Acetyltransferase (GNAT) domain L1871_04280 PF13302 Acetyltransferase (GNAT) domain L1871_04290 PF04074 YhcH/YjgK/YiaL L1871_04295 PF00871 Acetokinase family L1871_04300 PF00924 Mechanosensitive ion channel L1871_04305 PF03734 L,D-transpeptidase catalytic domain L1871_04305 PF17969 L,D-transpeptidase C-terminal domain L1871_04310 PF00474 Sodium:solute symporter family L1871_04320 PF13411 MerR HTH family regulatory protein L1871_04350 PF02525 Flavodoxin-like fold L1871_04355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_04355 PF03466 LysR substrate binding domain L1871_04360 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ L1871_04370 PF00005 ABC transporter L1871_04370 PF12848 ABC transporter L1871_04375 PF00478 IMP dehydrogenase / GMP reductase domain L1871_04375 PF00571 CBS domain L1871_04380 PF00267 Gram-negative porin L1871_04385 PF00072 Response regulator receiver domain L1871_04385 PF01584 CheW-like domain L1871_04390 PF13472 GDSL-like Lipase/Acylhydrolase family L1871_04395 PF00005 ABC transporter L1871_04405 PF08338 Domain of unknown function (DUF1731) L1871_04405 PF01370 NAD dependent epimerase/dehydratase family L1871_04410 PF00563 EAL domain L1871_04410 PF12792 CSS motif domain associated with EAL L1871_04415 PF00155 Aminotransferase class I and II L1871_04420 PF01483 Proprotein convertase P-domain L1871_04420 PF04389 Peptidase family M28 L1871_04425 PF02390 Putative methyltransferase L1871_04430 PF04320 Protein with unknown function (DUF469) L1871_04435 PF04960 Glutaminase L1871_04440 PF00581 Rhodanese-like domain L1871_04445 PF06004 Bacterial protein of unknown function (DUF903) L1871_04450 PF00664 ABC transporter transmembrane region L1871_04450 PF00005 ABC transporter L1871_04455 PF00561 alpha/beta hydrolase fold L1871_04475 PF00589 Phage integrase family L1871_04495 PF00563 EAL domain L1871_04495 PF03707 Bacterial signalling protein N terminal repeat L1871_04495 PF00990 Diguanylate cyclase, GGDEF domain L1871_04505 PF13426 PAS domain L1871_04505 PF08448 PAS fold L1871_04505 PF08447 PAS fold L1871_04505 PF05231 MASE1 L1871_04505 PF00990 Diguanylate cyclase, GGDEF domain L1871_04505 PF00563 EAL domain L1871_04510 PF00589 Phage integrase family L1871_04510 PF02899 Phage integrase, N-terminal SAM-like domain L1871_04540 PF01726 LexA DNA binding domain L1871_04540 PF00717 Peptidase S24-like L1871_04545 PF01555 DNA methylase L1871_04545 PF18273 Type III R-M EcoP15I C-terminal domain L1871_04555 PF00589 Phage integrase family L1871_04575 PF02899 Phage integrase, N-terminal SAM-like domain L1871_04575 PF00589 Phage integrase family L1871_04610 PF05598 Transposase domain (DUF772) L1871_04610 PF01609 Transposase DDE domain L1871_04620 PF00360 Phytochrome region L1871_04620 PF00563 EAL domain L1871_04620 PF01590 GAF domain L1871_04620 PF00990 Diguanylate cyclase, GGDEF domain L1871_04630 PF06877 Regulator of ribonuclease activity B L1871_04635 PF00563 EAL domain L1871_04635 PF00990 Diguanylate cyclase, GGDEF domain L1871_04635 PF03707 Bacterial signalling protein N terminal repeat L1871_04660 PF09905 DNA-binding protein VF530 L1871_04665 PF02666 Phosphatidylserine decarboxylase L1871_04670 PF03193 RsgA GTPase L1871_04675 PF00929 Exonuclease L1871_04720 PF00313 'Cold-shock' DNA-binding domain L1871_04730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_04730 PF00672 HAMP domain L1871_04735 PF00749 tRNA synthetases class I (E and Q), catalytic domain L1871_04770 PF06483 Chitinase C L1871_04770 PF00704 Glycosyl hydrolases family 18 L1871_04785 PF02472 Biopolymer transport protein ExbD/TolR L1871_04790 PF01618 MotA/TolQ/ExbB proton channel family L1871_04795 PF01618 MotA/TolQ/ExbB proton channel family L1871_04805 PF07715 TonB-dependent Receptor Plug Domain L1871_04805 PF00593 TonB dependent receptor L1871_04810 PF00528 Binding-protein-dependent transport system inner membrane component L1871_04815 PF00528 Binding-protein-dependent transport system inner membrane component L1871_04815 PF12911 N-terminal TM domain of oligopeptide transport permease C L1871_04820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L1871_04825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L1871_04825 PF00005 ABC transporter L1871_04830 PF00005 ABC transporter L1871_04830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L1871_04835 PF07687 Peptidase dimerisation domain L1871_04835 PF01546 Peptidase family M20/M25/M40 L1871_04840 PF00156 Phosphoribosyl transferase domain L1871_04845 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) L1871_04850 PF07417 Sigma factor-binding transcriptional regulator Crl L1871_04855 PF01472 PUA domain L1871_04855 PF00696 Amino acid kinase family L1871_04860 PF00171 Aldehyde dehydrogenase family L1871_04870 PF00582 Universal stress protein family L1871_04885 PF04324 BFD-like [2Fe-2S] binding domain L1871_04885 PF00384 Molybdopterin oxidoreductase L1871_04885 PF01568 Molydopterin dinucleotide binding domain L1871_04885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain L1871_04890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L1871_04890 PF10414 Sirohaem synthase dimerisation region L1871_04890 PF14824 Sirohaem biosynthesis protein central L1871_04900 PF00005 ABC transporter L1871_04905 PF00528 Binding-protein-dependent transport system inner membrane component L1871_04910 PF00005 ABC transporter L1871_04915 PF04324 BFD-like [2Fe-2S] binding domain L1871_04915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain L1871_04915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain L1871_04915 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1871_04915 PF13806 Rieske-like [2Fe-2S] domain L1871_04915 PF18267 Rubredoxin NAD+ reductase C-terminal domain L1871_04920 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain L1871_04920 PF18267 Rubredoxin NAD+ reductase C-terminal domain L1871_04920 PF13806 Rieske-like [2Fe-2S] domain L1871_04920 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1871_04920 PF01077 Nitrite and sulphite reductase 4Fe-4S domain L1871_04920 PF04324 BFD-like [2Fe-2S] binding domain L1871_04925 PF00294 pfkB family carbohydrate kinase L1871_04930 PF04227 Indigoidine synthase A like protein L1871_04935 PF00194 Eukaryotic-type carbonic anhydrase L1871_04950 PF00994 Probable molybdopterin binding domain L1871_04960 PF06738 Putative threonine/serine exporter L1871_04965 PF12821 Threonine/Serine exporter, ThrE L1871_04970 PF00186 Dihydrofolate reductase L1871_04975 PF00571 CBS domain L1871_04975 PF00005 ABC transporter L1871_04980 PF00528 Binding-protein-dependent transport system inner membrane component L1871_04985 PF04069 Substrate binding domain of ABC-type glycine betaine transport system L1871_04990 PF01507 Phosphoadenosine phosphosulfate reductase family L1871_04995 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain L1871_04995 PF01077 Nitrite and sulphite reductase 4Fe-4S domain L1871_05000 PF00175 Oxidoreductase NAD-binding domain L1871_05000 PF00258 Flavodoxin L1871_05000 PF00667 FAD binding domain L1871_05005 PF02567 Phenazine biosynthesis-like protein L1871_05010 PF01336 OB-fold nucleic acid binding domain L1871_05010 PF00152 tRNA synthetases class II (D, K and N) L1871_05020 PF00672 HAMP domain L1871_05020 PF02743 Cache domain L1871_05020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_05025 PF03616 Sodium/glutamate symporter L1871_05030 PF00710 Asparaginase, N-terminal L1871_05030 PF17763 Glutaminase/Asparaginase C-terminal domain L1871_05040 PF05762 VWA domain containing CoxE-like protein L1871_05045 PF07023 Protein of unknown function (DUF1315) L1871_05050 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain L1871_05050 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain L1871_05065 PF01343 Peptidase family S49 L1871_05070 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1871_05070 PF00724 NADH:flavin oxidoreductase / NADH oxidase family L1871_05075 PF00881 Nitroreductase family L1871_05090 PF00132 Bacterial transferase hexapeptide (six repeats) L1871_05090 PF12464 Maltose acetyltransferase L1871_05100 PF00107 Zinc-binding dehydrogenase L1871_05100 PF08240 Alcohol dehydrogenase GroES-like domain L1871_05105 PF03466 LysR substrate binding domain L1871_05105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_05110 PF02378 Phosphotransferase system, EIIC L1871_05110 PF00367 phosphotransferase system, EIIB L1871_05110 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L1871_05115 PF00474 Sodium:solute symporter family L1871_05120 PF06196 Protein of unknown function (DUF997) L1871_05125 PF02785 Biotin carboxylase C-terminal domain L1871_05125 PF00289 Biotin carboxylase, N-terminal domain L1871_05125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L1871_05130 PF00364 Biotin-requiring enzyme L1871_05135 PF01220 Dehydroquinase class II L1871_05140 PF13193 AMP-binding enzyme C-terminal domain L1871_05140 PF16177 Acetyl-coenzyme A synthetase N-terminus L1871_05140 PF00501 AMP-binding enzyme L1871_05145 PF00563 EAL domain L1871_05145 PF00990 Diguanylate cyclase, GGDEF domain L1871_05145 PF03707 Bacterial signalling protein N terminal repeat L1871_05155 PF02613 Nitrate reductase delta subunit L1871_05165 PF00464 Serine hydroxymethyltransferase L1871_05175 PF03477 ATP cone domain L1871_05180 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L1871_05180 PF01872 RibD C-terminal domain L1871_05185 PF00677 Lumazine binding domain L1871_05190 PF00925 GTP cyclohydrolase II L1871_05190 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase L1871_05195 PF00885 6,7-dimethyl-8-ribityllumazine synthase L1871_05200 PF01029 NusB family L1871_05205 PF00586 AIR synthase related protein, N-terminal domain L1871_05205 PF02769 AIR synthase related protein, C-terminal domain L1871_05210 PF04608 Phosphatidylglycerophosphatase A L1871_05215 PF00005 ABC transporter L1871_05215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L1871_05220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L1871_05225 PF00528 Binding-protein-dependent transport system inner membrane component L1871_05230 PF00528 Binding-protein-dependent transport system inner membrane component L1871_05230 PF12911 N-terminal TM domain of oligopeptide transport permease C L1871_05235 PF02780 Transketolase, C-terminal domain L1871_05235 PF02779 Transketolase, pyrimidine binding domain L1871_05235 PF13292 1-deoxy-D-xylulose-5-phosphate synthase L1871_05240 PF00348 Polyprenyl synthetase L1871_05245 PF02609 Exonuclease VII small subunit L1871_05250 PF01618 MotA/TolQ/ExbB proton channel family L1871_05255 PF13677 Membrane MotB of proton-channel complex MotA/MotB L1871_05255 PF00691 OmpA family L1871_05260 PF01272 Transcription elongation factor, GreA/GreB, C-term L1871_05260 PF03449 Transcription elongation factor, N-terminal L1871_05270 PF01985 CRS1 / YhbY (CRM) domain L1871_05275 PF01728 FtsJ-like methyltransferase L1871_05280 PF01434 Peptidase family M41 L1871_05280 PF00004 ATPase family associated with various cellular activities (AAA) L1871_05280 PF17862 AAA+ lid domain L1871_05280 PF06480 FtsH Extracellular L1871_05285 PF00809 Pterin binding enzyme L1871_05290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L1871_05290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L1871_05290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L1871_05290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L1871_05295 PF00121 Triosephosphate isomerase L1871_05300 PF03840 Preprotein translocase SecG subunit L1871_05315 PF02576 RimP N-terminal domain L1871_05315 PF17384 RimP C-terminal SH3 domain L1871_05320 PF13184 NusA-like KH domain L1871_05320 PF08529 NusA N-terminal domain L1871_05320 PF00575 S1 RNA binding domain L1871_05325 PF04760 Translation initiation factor IF-2, N-terminal region L1871_05325 PF00009 Elongation factor Tu GTP binding domain L1871_05325 PF11987 Translation-initiation factor 2 L1871_05325 PF08364 Bacterial translation initiation factor IF-2 associated region L1871_05330 PF02033 Ribosome-binding factor A L1871_05335 PF01509 TruB family pseudouridylate synthase (N terminal domain) L1871_05335 PF16198 tRNA pseudouridylate synthase B C-terminal domain L1871_05335 PF09157 Pseudouridine synthase II TruB, C-terminal L1871_05340 PF00312 Ribosomal protein S15 L1871_05345 PF00013 KH domain L1871_05345 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain L1871_05345 PF01138 3' exoribonuclease family, domain 1 L1871_05345 PF03725 3' exoribonuclease family, domain 2 L1871_05345 PF00575 S1 RNA binding domain L1871_05350 PF07690 Major Facilitator Superfamily L1871_05355 PF02635 DsrE/DsrF-like family L1871_05360 PF06476 Protein of unknown function (DUF1090) L1871_05365 PF12838 4Fe-4S dicluster domain L1871_05370 PF01136 Peptidase family U32 L1871_05370 PF16325 Peptidase family U32 C-terminal domain L1871_05375 PF17969 L,D-transpeptidase C-terminal domain L1871_05375 PF03734 L,D-transpeptidase catalytic domain L1871_05385 PF01523 Putative modulator of DNA gyrase L1871_05390 PF01523 Putative modulator of DNA gyrase L1871_05395 PF00258 Flavodoxin L1871_05400 PF02899 Phage integrase, N-terminal SAM-like domain L1871_05400 PF00589 Phage integrase family L1871_05405 PF01741 Large-conductance mechanosensitive channel, MscL L1871_05415 PF17768 RecJ OB domain L1871_05415 PF01368 DHH family L1871_05415 PF02272 DHHA1 domain L1871_05420 PF13411 MerR HTH family regulatory protein L1871_05435 PF02508 Rnf-Nqr subunit, membrane protein L1871_05445 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family L1871_05445 PF04055 Radical SAM superfamily L1871_05450 PF03099 Biotin/lipoate A/B protein ligase family L1871_05455 PF04359 Protein of unknown function (DUF493) L1871_05460 PF07943 Penicillin-binding protein 5, C-terminal domain L1871_05460 PF00768 D-alanyl-D-alanine carboxypeptidase L1871_05465 PF03330 Lytic transglycolase L1871_05465 PF05036 Sporulation related domain L1871_05470 PF13406 Transglycosylase SLT domain L1871_05475 PF01098 Cell cycle protein L1871_05480 PF03717 Penicillin-binding Protein dimerisation domain L1871_05480 PF00905 Penicillin binding protein transpeptidase domain L1871_05485 PF02590 Predicted SPOUT methyltransferase L1871_05495 PF01467 Cytidylyltransferase-like L1871_05510 PF08264 Anticodon-binding domain of tRNA L1871_05510 PF00133 tRNA synthetases class I (I, L, M and V) L1871_05510 PF13603 Leucyl-tRNA synthetase, Domain 2 L1871_05515 PF07295 Zinc-ribbon containing domain L1871_05520 PF00795 Carbon-nitrogen hydrolase L1871_05525 PF03471 Transporter associated domain L1871_05525 PF00571 CBS domain L1871_05530 PF02130 Uncharacterized protein family UPF0054 L1871_05535 PF02562 PhoH-like protein L1871_05540 PF04055 Radical SAM superfamily L1871_05540 PF00919 Uncharacterized protein family UPF0004 L1871_05540 PF01938 TRAM domain L1871_05545 PF01494 FAD binding domain L1871_05550 PF00857 Isochorismatase family L1871_05555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_05555 PF03466 LysR substrate binding domain L1871_05565 PF13419 Haloacid dehalogenase-like hydrolase L1871_05570 PF00990 Diguanylate cyclase, GGDEF domain L1871_05570 PF17151 Periplasmic sensor domain L1871_05580 PF00990 Diguanylate cyclase, GGDEF domain L1871_05580 PF17152 Periplasmic sensor domain L1871_05590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain L1871_05590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L1871_05600 PF03171 2OG-Fe(II) oxygenase superfamily L1871_05600 PF14226 non-haem dioxygenase in morphine synthesis N-terminal L1871_05610 PF03180 NLPA lipoprotein L1871_05620 PF00528 Binding-protein-dependent transport system inner membrane component L1871_05625 PF09285 Elongation factor P, C-terminal L1871_05625 PF08207 Elongation factor P (EF-P) KOW-like domain L1871_05625 PF01132 Elongation factor P (EF-P) OB domain L1871_05635 PF00478 IMP dehydrogenase / GMP reductase domain L1871_05640 PF18030 RimK PreATP-grasp domain L1871_05640 PF08443 RimK-like ATP-grasp domain L1871_05645 PF08521 Two-component sensor kinase N-terminal L1871_05645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_05645 PF00512 His Kinase A (phospho-acceptor) domain L1871_05650 PF00072 Response regulator receiver domain L1871_05650 PF00486 Transcriptional regulatory protein, C terminal L1871_05660 PF00106 short chain dehydrogenase L1871_05670 PF00501 AMP-binding enzyme L1871_05680 PF13847 Methyltransferase domain L1871_05685 PF06224 Winged helix DNA-binding domain L1871_05705 PF02313 Fumarate reductase subunit D L1871_05710 PF02300 Fumarate reductase subunit C L1871_05715 PF13183 4Fe-4S dicluster domain L1871_05715 PF13085 2Fe-2S iron-sulfur cluster binding domain L1871_05720 PF02910 Fumarate reductase flavoprotein C-term L1871_05720 PF00890 FAD binding domain L1871_05725 PF00672 HAMP domain L1871_05725 PF02743 Cache domain L1871_05725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_05730 PF03009 Glycerophosphoryl diester phosphodiesterase family L1871_05735 PF12795 Mechanosensitive ion channel porin domain L1871_05735 PF12794 Mechanosensitive ion channel inner membrane domain 1 L1871_05735 PF00924 Mechanosensitive ion channel L1871_05745 PF01476 LysM domain L1871_05745 PF08525 Opacity-associated protein A N-terminal motif L1871_05745 PF01551 Peptidase family M23 L1871_05760 PF03466 LysR substrate binding domain L1871_05760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_05775 PF03466 LysR substrate binding domain L1871_05775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_05780 PF00905 Penicillin binding protein transpeptidase domain L1871_05780 PF00912 Transglycosylase L1871_05780 PF17092 Penicillin-binding protein OB-like domain L1871_05785 PF11104 Type IV pilus assembly protein PilM; L1871_05795 PF04350 Pilus assembly protein, PilO L1871_05805 PF11741 AMIN domain L1871_05805 PF00263 Bacterial type II and III secretion system protein L1871_05805 PF03958 Bacterial type II/III secretion system short domain L1871_05805 PF07660 Secretin and TonB N terminus short domain L1871_05810 PF01202 Shikimate kinase L1871_05815 PF01761 3-dehydroquinate synthase L1871_05820 PF05036 Sporulation related domain L1871_05825 PF02086 D12 class N6 adenine-specific DNA methyltransferase L1871_05830 PF00834 Ribulose-phosphate 3 epimerase family L1871_05835 PF13419 Haloacid dehalogenase-like hydrolase L1871_05840 PF00579 tRNA synthetases class I (W and Y) L1871_05850 PF00117 Glutamine amidotransferase class-I L1871_05855 PF00202 Aminotransferase class-III L1871_05860 PF04958 Arginine N-succinyltransferase beta subunit L1871_05865 PF00171 Aldehyde dehydrogenase family L1871_05880 PF13419 Haloacid dehalogenase-like hydrolase L1871_05885 PF07690 Major Facilitator Superfamily L1871_05895 PF07859 alpha/beta hydrolase fold L1871_05900 PF04266 ASCH domain L1871_05905 PF02080 TrkA-C domain L1871_05905 PF03600 Citrate transporter L1871_05950 PF06071 Protein of unknown function (DUF933) L1871_05950 PF01926 50S ribosome-binding GTPase L1871_05955 PF01195 Peptidyl-tRNA hydrolase L1871_05960 PF14572 Phosphoribosyl synthetase-associated domain L1871_05960 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase L1871_05970 PF00288 GHMP kinases N terminal domain L1871_05970 PF08544 GHMP kinases C terminal L1871_05975 PF03550 Outer membrane lipoprotein LolB L1871_05980 PF01488 Shikimate / quinate 5-dehydrogenase L1871_05980 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain L1871_05980 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain L1871_05985 PF00472 RF-1 domain L1871_05985 PF03462 PCRF domain L1871_05990 PF17827 PrmC N-terminal domain L1871_05990 PF13847 Methyltransferase domain L1871_06000 PF13369 Transglutaminase-like superfamily L1871_06005 PF00793 DAHP synthetase I family L1871_06010 PF13006 Insertion element 4 transposase N-terminal L1871_06010 PF01609 Transposase DDE domain L1871_06015 PF00375 Sodium:dicarboxylate symporter family L1871_06020 PF01228 Glycine radical L1871_06025 PF01609 Transposase DDE domain L1871_06025 PF05598 Transposase domain (DUF772) L1871_06030 PF03167 Uracil DNA glycosylase superfamily L1871_06045 PF00923 Transaldolase/Fructose-6-phosphate aldolase L1871_06050 PF01235 Sodium:alanine symporter family L1871_06055 PF00144 Beta-lactamase L1871_06060 PF07690 Major Facilitator Superfamily L1871_06065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_06065 PF03466 LysR substrate binding domain L1871_06070 PF03652 Holliday junction resolvase L1871_06075 PF02622 Uncharacterized ACR, COG1678 L1871_06080 PF02951 Prokaryotic glutathione synthetase, N-terminal domain L1871_06080 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain L1871_06085 PF04452 RNA methyltransferase L1871_06090 PF04231 Endonuclease I L1871_06095 PF10263 SprT-like family L1871_06095 PF17283 SprT-like zinc ribbon domain L1871_06100 PF02773 S-adenosylmethionine synthetase, C-terminal domain L1871_06100 PF02772 S-adenosylmethionine synthetase, central domain L1871_06100 PF00438 S-adenosylmethionine synthetase, N-terminal domain L1871_06105 PF02779 Transketolase, pyrimidine binding domain L1871_06105 PF02780 Transketolase, C-terminal domain L1871_06105 PF00456 Transketolase, thiamine diphosphate binding domain L1871_06110 PF01609 Transposase DDE domain L1871_06110 PF05598 Transposase domain (DUF772) L1871_06140 PF03702 Anhydro-N-acetylmuramic acid kinase L1871_06145 PF08525 Opacity-associated protein A N-terminal motif L1871_06145 PF01551 Peptidase family M23 L1871_06145 PF01476 LysM domain L1871_06150 PF00579 tRNA synthetases class I (W and Y) L1871_06155 PF01204 Trehalase L1871_06165 PF01161 Phosphatidylethanolamine-binding protein L1871_06170 PF00709 Adenylosuccinate synthetase L1871_06175 PF03466 LysR substrate binding domain L1871_06175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_06185 PF00155 Aminotransferase class I and II L1871_06190 PF07690 Major Facilitator Superfamily L1871_06195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_06195 PF03466 LysR substrate binding domain L1871_06200 PF00106 short chain dehydrogenase L1871_06205 PF08496 Peptidase family S49 N-terminal L1871_06205 PF01343 Peptidase family S49 L1871_06210 PF04996 Succinylarginine dihydrolase L1871_06215 PF01131 DNA topoisomerase L1871_06215 PF01396 Topoisomerase DNA binding C4 zinc finger L1871_06215 PF01751 Toprim domain L1871_06215 PF08272 Topoisomerase I zinc-ribbon-like L1871_06230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_06230 PF08447 PAS fold L1871_06235 PF02838 Glycosyl hydrolase family 20, domain 2 L1871_06235 PF00728 Glycosyl hydrolase family 20, catalytic domain L1871_06240 PF01869 BadF/BadG/BcrA/BcrD ATPase family L1871_06250 PF00005 ABC transporter L1871_06250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L1871_06255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L1871_06255 PF00005 ABC transporter L1871_06260 PF00528 Binding-protein-dependent transport system inner membrane component L1871_06260 PF12911 N-terminal TM domain of oligopeptide transport permease C L1871_06265 PF00528 Binding-protein-dependent transport system inner membrane component L1871_06270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L1871_06275 PF04055 Radical SAM superfamily L1871_06275 PF18693 TRAM domain L1871_06275 PF00919 Uncharacterized protein family UPF0004 L1871_06290 PF01695 IstB-like ATP binding protein L1871_06300 PF00672 HAMP domain L1871_06300 PF02743 Cache domain L1871_06300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_06305 PF01609 Transposase DDE domain L1871_06305 PF05598 Transposase domain (DUF772) L1871_06310 PF01609 Transposase DDE domain L1871_06310 PF05598 Transposase domain (DUF772) L1871_06330 PF00072 Response regulator receiver domain L1871_06335 PF01022 Bacterial regulatory protein, arsR family L1871_06340 PF01758 Sodium Bile acid symporter family L1871_06345 PF03960 ArsC family L1871_06355 PF02049 Flagellar hook-basal body complex protein FliE L1871_06360 PF01514 Secretory protein of YscJ/FliF family L1871_06360 PF08345 Flagellar M-ring protein C-terminal L1871_06365 PF14842 FliG N-terminal domain L1871_06365 PF01706 FliG C-terminal domain L1871_06365 PF14841 FliG middle domain L1871_06375 PF18269 T3SS EscN ATPase C-terminal domain L1871_06375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L1871_06395 PF02154 Flagellar motor switch protein FliM L1871_06395 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term L1871_06400 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term L1871_06405 PF04347 Flagellar biosynthesis protein, FliO L1871_06410 PF00813 FliP family L1871_06415 PF01313 Bacterial export proteins, family 3 L1871_06420 PF01311 Bacterial export proteins, family 1 L1871_06425 PF01312 FlhB HrpN YscU SpaS Family L1871_06430 PF00771 FHIPEP family L1871_06435 PF00448 SRP54-type protein, GTPase domain L1871_06440 PF10609 NUBPL iron-transfer P-loop NTPase L1871_06445 PF04545 Sigma-70, region 4 L1871_06445 PF04542 Sigma-70 region 2 L1871_06445 PF04539 Sigma-70 region 3 L1871_06450 PF00072 Response regulator receiver domain L1871_06455 PF04344 Chemotaxis phosphatase, CheZ L1871_06460 PF01584 CheW-like domain L1871_06460 PF02895 Signal transducing histidine kinase, homodimeric domain L1871_06460 PF00072 Response regulator receiver domain L1871_06460 PF01627 Hpt domain L1871_06460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_06465 PF00072 Response regulator receiver domain L1871_06465 PF01339 CheB methylesterase L1871_06470 PF01618 MotA/TolQ/ExbB proton channel family L1871_06475 PF13677 Membrane MotB of proton-channel complex MotA/MotB L1871_06475 PF00691 OmpA family L1871_06480 PF13614 AAA domain L1871_06490 PF01584 CheW-like domain L1871_06500 PF00005 ABC transporter L1871_06505 PF03379 CcmB protein L1871_06510 PF01578 Cytochrome C assembly protein L1871_06515 PF04995 Heme exporter protein D (CcmD) L1871_06520 PF03100 CcmE L1871_06525 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal L1871_06525 PF01578 Cytochrome C assembly protein L1871_06530 PF08534 Redoxin L1871_06535 PF03918 Cytochrome C biogenesis protein L1871_06545 PF04333 MlaA lipoprotein L1871_06550 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain L1871_06550 PF02777 Iron/manganese superoxide dismutases, C-terminal domain L1871_06555 PF00462 Glutaredoxin L1871_06560 PF01189 16S rRNA methyltransferase RsmB/F L1871_06560 PF01029 NusB family L1871_06575 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region L1871_06575 PF01243 Pyridoxamine 5'-phosphate oxidase L1871_06580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_06580 PF03466 LysR substrate binding domain L1871_06585 PF01546 Peptidase family M20/M25/M40 L1871_06605 PF13508 Acetyltransferase (GNAT) domain L1871_06620 PF01081 KDPG and KHG aldolase L1871_06635 PF07729 FCD domain L1871_06635 PF00392 Bacterial regulatory proteins, gntR family L1871_06645 PF00589 Phage integrase family L1871_06645 PF13356 Arm DNA-binding domain L1871_06655 PF01668 SmpB protein L1871_06660 PF03364 Polyketide cyclase / dehydrase and lipid transport L1871_06665 PF03658 RnfH family Ubiquitin L1871_06670 PF13460 NAD(P)H-binding L1871_06675 PF04355 SmpA / OmlA family L1871_06680 PF00465 Iron-containing alcohol dehydrogenase L1871_06685 PF01048 Phosphorylase superfamily L1871_06690 PF00849 RNA pseudouridylate synthase L1871_06695 PF01156 Inosine-uridine preferring nucleoside hydrolase L1871_06710 PF07509 Protein of unknown function (DUF1523) L1871_06715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_06715 PF00672 HAMP domain L1871_06720 PF01810 LysE type translocator L1871_06730 PF03471 Transporter associated domain L1871_06730 PF02080 TrkA-C domain L1871_06730 PF00999 Sodium/hydrogen exchanger family L1871_06740 PF02557 D-alanyl-D-alanine carboxypeptidase L1871_06745 PF07687 Peptidase dimerisation domain L1871_06745 PF01546 Peptidase family M20/M25/M40 L1871_06750 PF03960 ArsC family L1871_06765 PF07687 Peptidase dimerisation domain L1871_06765 PF01546 Peptidase family M20/M25/M40 L1871_06780 PF03605 Anaerobic c4-dicarboxylate membrane transporter L1871_06785 PF01336 OB-fold nucleic acid binding domain L1871_06785 PF00152 tRNA synthetases class II (D, K and N) L1871_06800 PF00202 Aminotransferase class-III L1871_06805 PF06968 Biotin and Thiamin Synthesis associated domain L1871_06805 PF04055 Radical SAM superfamily L1871_06810 PF00155 Aminotransferase class I and II L1871_06815 PF12697 Alpha/beta hydrolase family L1871_06815 PF08241 Methyltransferase domain L1871_06825 PF01435 Peptidase family M48 L1871_06830 PF03476 MOSC N-terminal beta barrel domain L1871_06830 PF03473 MOSC domain L1871_06830 PF00111 2Fe-2S iron-sulfur cluster binding domain L1871_06830 PF00111 2Fe-2S iron-sulfur cluster binding domain L1871_06830 PF03476 MOSC N-terminal beta barrel domain L1871_06830 PF03473 MOSC domain L1871_06835 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster L1871_06835 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region L1871_06835 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1871_06840 PF10371 Domain of unknown function L1871_06840 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II L1871_06840 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase L1871_06840 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg L1871_06840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L1871_06845 PF04325 Protein of unknown function (DUF465) L1871_06855 PF01554 MatE L1871_06875 PF00291 Pyridoxal-phosphate dependent enzyme L1871_06880 PF00465 Iron-containing alcohol dehydrogenase L1871_06890 PF13977 BetI-type transcriptional repressor, C-terminal L1871_06890 PF00440 Bacterial regulatory proteins, tetR family L1871_06895 PF00171 Aldehyde dehydrogenase family L1871_06905 PF00877 NlpC/P60 family L1871_06910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_06910 PF03466 LysR substrate binding domain L1871_06930 PF08003 Protein of unknown function (DUF1698) L1871_06935 PF13649 Methyltransferase domain L1871_06940 PF01904 Protein of unknown function DUF72 L1871_06945 PF01336 OB-fold nucleic acid binding domain L1871_06945 PF00152 tRNA synthetases class II (D, K and N) L1871_06945 PF02938 GAD domain L1871_06950 PF01709 Transcriptional regulator L1871_06955 PF08019 Phosphoethanolamine transferase EptA/EptB L1871_06955 PF00884 Sulfatase L1871_06960 PF01047 MarR family L1871_06960 PF00480 ROK family L1871_06965 PF01979 Amidohydrolase family L1871_06970 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase L1871_06975 PF02378 Phosphotransferase system, EIIC L1871_06975 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L1871_06975 PF00367 phosphotransferase system, EIIB L1871_06980 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain L1871_06980 PF00728 Glycosyl hydrolase family 20, catalytic domain L1871_06980 PF02838 Glycosyl hydrolase family 20, domain 2 L1871_06980 PF03173 Putative carbohydrate binding domain L1871_06985 PF00749 tRNA synthetases class I (E and Q), catalytic domain L1871_06985 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain L1871_06990 PF01475 Ferric uptake regulator family L1871_07000 PF00258 Flavodoxin L1871_07005 PF01402 Ribbon-helix-helix protein, copG family L1871_07015 PF00561 alpha/beta hydrolase fold L1871_07020 PF03925 SeqA protein C-terminal domain L1871_07020 PF17206 SeqA protein N-terminal domain L1871_07025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L1871_07025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L1871_07025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L1871_07025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L1871_07035 PF01047 MarR family L1871_07040 PF13406 Transglycosylase SLT domain L1871_07045 PF01066 CDP-alcohol phosphatidyltransferase L1871_07050 PF00005 ABC transporter L1871_07060 PF13416 Bacterial extracellular solute-binding protein L1871_07065 PF00403 Heavy-metal-associated domain L1871_07065 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1871_07065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L1871_07070 PF02627 Carboxymuconolactone decarboxylase family L1871_07090 PF01103 Surface antigen L1871_07090 PF07244 Surface antigen variable number repeat L1871_07090 PF17243 POTRA domain TamA domain 1 L1871_07095 PF04357 TamB, inner membrane protein subunit of TAM complex L1871_07115 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein L1871_07120 PF00563 EAL domain L1871_07120 PF00990 Diguanylate cyclase, GGDEF domain L1871_07120 PF03707 Bacterial signalling protein N terminal repeat L1871_07125 PF01464 Transglycosylase SLT domain L1871_07125 PF14718 Soluble lytic murein transglycosylase L domain L1871_07130 PF00356 Bacterial regulatory proteins, lacI family L1871_07140 PF03061 Thioesterase superfamily L1871_07150 PF03372 Endonuclease/Exonuclease/phosphatase family L1871_07155 PF01476 LysM domain L1871_07155 PF01464 Transglycosylase SLT domain L1871_07165 PF00753 Metallo-beta-lactamase superfamily L1871_07165 PF16123 Hydroxyacylglutathione hydrolase C-terminus L1871_07170 PF08241 Methyltransferase domain L1871_07175 PF00075 RNase H L1871_07180 PF00929 Exonuclease L1871_07190 PF11849 Domain of unknown function (DUF3369) L1871_07195 PF09317 Domain of unknown function (DUF1974) L1871_07195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L1871_07195 PF02770 Acyl-CoA dehydrogenase, middle domain L1871_07195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L1871_07200 PF13580 SIS domain L1871_07205 PF13230 Glutamine amidotransferases class-II L1871_07215 PF01933 Uncharacterised protein family UPF0052 L1871_07225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_07225 PF00512 His Kinase A (phospho-acceptor) domain L1871_07225 PF00072 Response regulator receiver domain L1871_07225 PF09456 RcsC Alpha-Beta-Loop (ABL) L1871_07240 PF00196 Bacterial regulatory proteins, luxR family L1871_07240 PF00072 Response regulator receiver domain L1871_07245 PF07730 Histidine kinase L1871_07245 PF00672 HAMP domain L1871_07245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_07245 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term L1871_07250 PF06463 Molybdenum Cofactor Synthesis C L1871_07250 PF04055 Radical SAM superfamily L1871_07255 PF13187 4Fe-4S dicluster domain L1871_07255 PF12800 4Fe-4S binding domain L1871_07255 PF00037 4Fe-4S binding domain L1871_07265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain L1871_07265 PF10518 TAT (twin-arginine translocation) pathway signal sequence L1871_07265 PF00384 Molybdopterin oxidoreductase L1871_07265 PF01568 Molydopterin dinucleotide binding domain L1871_07270 PF12800 4Fe-4S binding domain L1871_07270 PF12838 4Fe-4S dicluster domain L1871_07275 PF13237 4Fe-4S dicluster domain L1871_07275 PF12801 4Fe-4S binding domain L1871_07280 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) L1871_07285 PF03264 NapC/NirT cytochrome c family, N-terminal region L1871_07290 PF00994 Probable molybdopterin binding domain L1871_07295 PF01967 MoaC family L1871_07300 PF02597 ThiS family L1871_07305 PF02391 MoaE protein L1871_07315 PF00528 Binding-protein-dependent transport system inner membrane component L1871_07320 PF00005 ABC transporter L1871_07320 PF03459 TOBE domain L1871_07325 PF12697 Alpha/beta hydrolase family L1871_07330 PF06406 StbA protein L1871_07340 PF00899 ThiF family L1871_07345 PF00994 Probable molybdopterin binding domain L1871_07345 PF03453 MoeA N-terminal region (domain I and II) L1871_07345 PF03454 MoeA C-terminal region (domain IV) L1871_07350 PF01227 GTP cyclohydrolase I L1871_07355 PF00672 HAMP domain L1871_07355 PF17200 Single Cache domain 2 L1871_07355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_07360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_07360 PF00672 HAMP domain L1871_07365 PF01268 Formate--tetrahydrofolate ligase L1871_07375 PF03466 LysR substrate binding domain L1871_07375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_07380 PF04264 YceI-like domain L1871_07390 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain L1871_07390 PF05221 S-adenosyl-L-homocysteine hydrolase L1871_07405 PF07687 Peptidase dimerisation domain L1871_07405 PF01546 Peptidase family M20/M25/M40 L1871_07410 PF17944 Arginine decarboxylase C-terminal helical extension L1871_07410 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain L1871_07410 PF17810 Arginine decarboxylase helical bundle domain L1871_07425 PF03707 Bacterial signalling protein N terminal repeat L1871_07425 PF00563 EAL domain L1871_07425 PF00990 Diguanylate cyclase, GGDEF domain L1871_07430 PF00300 Histidine phosphatase superfamily (branch 1) L1871_07435 PF00271 Helicase conserved C-terminal domain L1871_07435 PF04851 Type III restriction enzyme, res subunit L1871_07470 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase L1871_07470 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain L1871_07475 PF00849 RNA pseudouridylate synthase L1871_07475 PF01479 S4 domain L1871_07480 PF07690 Major Facilitator Superfamily L1871_07490 PF03466 LysR substrate binding domain L1871_07490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_07500 PF10689 Protein of unknown function (DUF2496) L1871_07510 PF04391 Protein of unknown function (DUF533) L1871_07520 PF00392 Bacterial regulatory proteins, gntR family L1871_07520 PF00155 Aminotransferase class I and II L1871_07525 PF01654 Cytochrome bd terminal oxidase subunit I L1871_07530 PF02322 Cytochrome bd terminal oxidase subunit II L1871_07540 PF07690 Major Facilitator Superfamily L1871_07545 PF00248 Aldo/keto reductase family L1871_07565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_07565 PF03466 LysR substrate binding domain L1871_07570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L1871_07570 PF00370 FGGY family of carbohydrate kinases, N-terminal domain L1871_07575 PF00230 Major intrinsic protein L1871_07585 PF00455 DeoR C terminal sensor domain L1871_07585 PF08220 DeoR-like helix-turn-helix domain L1871_07590 PF16901 C-terminal domain of alpha-glycerophosphate oxidase L1871_07590 PF01266 FAD dependent oxidoreductase L1871_07595 PF03009 Glycerophosphoryl diester phosphodiesterase family L1871_07600 PF00793 DAHP synthetase I family L1871_07605 PF01817 Chorismate mutase type II L1871_07605 PF02153 Prephenate dehydrogenase L1871_07610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_07610 PF03466 LysR substrate binding domain L1871_07615 PF04219 Protein of unknown function, DUF L1871_07620 PF03974 Ecotin L1871_07640 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain L1871_07640 PF00326 Prolyl oligopeptidase family L1871_07645 PF00593 TonB dependent receptor L1871_07645 PF07715 TonB-dependent Receptor Plug Domain L1871_07650 PF00884 Sulfatase L1871_07650 PF11893 Domain of unknown function (DUF3413) L1871_07655 PF07208 Protein of unknown function (DUF1414) L1871_07660 PF04245 37-kD nucleoid-associated bacterial protein L1871_07665 PF01547 Bacterial extracellular solute-binding protein L1871_07670 PF14785 Maltose transport system permease protein MalF P2 domain L1871_07670 PF00528 Binding-protein-dependent transport system inner membrane component L1871_07675 PF00528 Binding-protein-dependent transport system inner membrane component L1871_07680 PF00005 ABC transporter L1871_07680 PF08402 TOBE domain L1871_07685 PF03976 Polyphosphate kinase 2 (PPK2) L1871_07690 PF00561 alpha/beta hydrolase fold L1871_07700 PF01594 AI-2E family transporter L1871_07705 PF01206 Sulfurtransferase TusA L1871_07710 PF01435 Peptidase family M48 L1871_07710 PF13181 Tetratricopeptide repeat L1871_07715 PF00578 AhpC/TSA family L1871_07720 PF03960 ArsC family L1871_07735 PF04336 Acyl carrier protein phosphodiesterase L1871_07745 PF00497 Bacterial extracellular solute-binding proteins, family 3 L1871_07750 PF01979 Amidohydrolase family L1871_07755 PF03956 Lysine exporter LysO L1871_07760 PF00005 ABC transporter L1871_07765 PF00497 Bacterial extracellular solute-binding proteins, family 3 L1871_07770 PF00528 Binding-protein-dependent transport system inner membrane component L1871_07775 PF00528 Binding-protein-dependent transport system inner membrane component L1871_07785 PF04055 Radical SAM superfamily L1871_07790 PF00563 EAL domain L1871_07790 PF00990 Diguanylate cyclase, GGDEF domain L1871_07790 PF03707 Bacterial signalling protein N terminal repeat L1871_07795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L1871_07795 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1871_07810 PF00529 HlyD membrane-fusion protein of T1SS L1871_07810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1871_07815 PF02321 Outer membrane efflux protein L1871_07820 PF01594 AI-2E family transporter L1871_07825 PF07678 A-macroglobulin TED domain L1871_07825 PF17962 Bacterial macroglobulin domain 6 L1871_07825 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain L1871_07825 PF11974 Bacterial alpha-2-macroglobulin MG3 domain L1871_07825 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain L1871_07825 PF07703 Alpha-2-macroglobulin bait region domain L1871_07825 PF00207 Alpha-2-macroglobulin family L1871_07825 PF01835 MG2 domain L1871_07825 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain L1871_07830 PF06832 Penicillin-Binding Protein C-terminus Family L1871_07830 PF00912 Transglycosylase L1871_07830 PF00905 Penicillin binding protein transpeptidase domain L1871_07840 PF02568 Thiamine biosynthesis protein (ThiI) L1871_07840 PF02926 THUMP domain L1871_07850 PF03458 UPF0126 domain L1871_07855 PF07196 Flagellin hook IN motif L1871_07855 PF00669 Bacterial flagellin N-terminal helical region L1871_07855 PF00700 Bacterial flagellin C-terminal helical region L1871_07860 PF00669 Bacterial flagellin N-terminal helical region L1871_07860 PF07196 Flagellin hook IN motif L1871_07860 PF00700 Bacterial flagellin C-terminal helical region L1871_07870 PF07195 Flagellar hook-associated protein 2 C-terminus L1871_07870 PF02465 Flagellar hook-associated protein 2 N-terminus L1871_07870 PF07196 Flagellin hook IN motif L1871_07875 PF02561 Flagellar protein FliS L1871_07905 PF03102 NeuB family L1871_07905 PF08666 SAF domain L1871_07920 PF00202 Aminotransferase class-III L1871_07925 PF02348 Cytidylyltransferase L1871_07935 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family L1871_07940 PF02719 Polysaccharide biosynthesis protein L1871_07945 PF01497 Periplasmic binding protein L1871_07955 PF01048 Phosphorylase superfamily L1871_07965 PF02535 ZIP Zinc transporter L1871_07970 PF12729 Four helix bundle sensory module for signal transduction L1871_07970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_07970 PF00672 HAMP domain L1871_07975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L1871_07980 PF10576 Iron-sulfur binding domain of endonuclease III L1871_07980 PF00633 Helix-hairpin-helix motif L1871_07980 PF00730 HhH-GPD superfamily base excision DNA repair protein L1871_07985 PF02508 Rnf-Nqr subunit, membrane protein L1871_07990 PF04205 FMN-binding domain L1871_07995 PF03116 NQR2, RnfD, RnfE family L1871_08000 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit L1871_08000 PF10531 SLBB domain L1871_08000 PF13375 RnfC Barrel sandwich hybrid domain L1871_08000 PF12838 4Fe-4S dicluster domain L1871_08005 PF04060 Putative Fe-S cluster L1871_08010 PF02508 Rnf-Nqr subunit, membrane protein L1871_08040 PF00717 Peptidase S24-like L1871_08040 PF01381 Helix-turn-helix L1871_08150 PF08461 Ribonuclease R winged-helix domain L1871_08155 PF11985 Protein of unknown function (DUF3486) L1871_08160 PF03237 Terminase-like family L1871_08165 PF06074 Protein of unknown function (DUF935) L1871_08190 PF10123 Mu-like prophage I protein L1871_08195 PF10124 Mu-like prophage major head subunit gpT L1871_08270 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase L1871_08270 PF07055 Enoyl reductase FAD binding domain L1871_08270 PF12241 Trans-2-enoyl-CoA reductase catalytic region L1871_08275 PF03606 C4-dicarboxylate anaerobic carrier L1871_08280 PF00155 Aminotransferase class I and II L1871_08290 PF00462 Glutaredoxin L1871_08295 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family L1871_08300 PF04851 Type III restriction enzyme, res subunit L1871_08300 PF00271 Helicase conserved C-terminal domain L1871_08305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1871_08305 PF00529 HlyD membrane-fusion protein of T1SS L1871_08310 PF11742 Protein of unknown function (DUF3302) L1871_08315 PF00924 Mechanosensitive ion channel L1871_08315 PF12795 Mechanosensitive ion channel porin domain L1871_08315 PF12794 Mechanosensitive ion channel inner membrane domain 1 L1871_08320 PF02554 Carbon starvation protein CstA L1871_08325 PF04397 LytTr DNA-binding domain L1871_08325 PF00072 Response regulator receiver domain L1871_08330 PF07694 5TMR of 5TMR-LYT L1871_08330 PF06580 Histidine kinase L1871_08335 PF00072 Response regulator receiver domain L1871_08340 PF00171 Aldehyde dehydrogenase family L1871_08340 PF00465 Iron-containing alcohol dehydrogenase L1871_08345 PF01609 Transposase DDE domain L1871_08345 PF13006 Insertion element 4 transposase N-terminal L1871_08350 PF01914 MarC family integral membrane protein L1871_08355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L1871_08360 PF00528 Binding-protein-dependent transport system inner membrane component L1871_08365 PF12911 N-terminal TM domain of oligopeptide transport permease C L1871_08365 PF00528 Binding-protein-dependent transport system inner membrane component L1871_08370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L1871_08370 PF00005 ABC transporter L1871_08375 PF00005 ABC transporter L1871_08375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L1871_08385 PF03741 Integral membrane protein TerC family L1871_08390 PF00842 Alanine racemase, C-terminal domain L1871_08390 PF01168 Alanine racemase, N-terminal domain L1871_08400 PF00375 Sodium:dicarboxylate symporter family L1871_08420 PF01979 Amidohydrolase family L1871_08430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_08430 PF00672 HAMP domain L1871_08435 PF01230 HIT domain L1871_08470 PF07549 SecD/SecF GG Motif L1871_08470 PF13721 SecD export protein N-terminal TM region L1871_08470 PF02355 Protein export membrane protein L1871_08475 PF02355 Protein export membrane protein L1871_08475 PF07549 SecD/SecF GG Motif L1871_08480 PF08447 PAS fold L1871_08480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_08480 PF13426 PAS domain L1871_08490 PF05661 Protein of unknown function (DUF808) L1871_08495 PF08439 Oligopeptidase F L1871_08495 PF01432 Peptidase family M3 L1871_08500 PF08439 Oligopeptidase F L1871_08500 PF01432 Peptidase family M3 L1871_08505 PF05728 Uncharacterised protein family (UPF0227) L1871_08510 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1871_08515 PF01906 Putative heavy-metal-binding L1871_08520 PF02016 LD-carboxypeptidase N-terminal domain L1871_08520 PF17676 LD-carboxypeptidase C-terminal domain L1871_08525 PF00884 Sulfatase L1871_08535 PF00696 Amino acid kinase family L1871_08535 PF01842 ACT domain L1871_08540 PF00583 Acetyltransferase (GNAT) family L1871_08540 PF00696 Amino acid kinase family L1871_08545 PF01625 Peptide methionine sulfoxide reductase L1871_08570 PF03466 LysR substrate binding domain L1871_08570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_08575 PF02652 L-lactate permease L1871_08580 PF02754 Cysteine-rich domain L1871_08585 PF11870 Domain of unknown function (DUF3390) L1871_08585 PF02589 LUD domain L1871_08585 PF13183 4Fe-4S dicluster domain L1871_08590 PF02589 LUD domain L1871_08595 PF02913 FAD linked oxidases, C-terminal domain L1871_08595 PF01565 FAD binding domain L1871_08615 PF02687 FtsX-like permease family L1871_08615 PF12704 MacB-like periplasmic core domain L1871_08620 PF00005 ABC transporter L1871_08630 PF03600 Citrate transporter L1871_08640 PF07690 Major Facilitator Superfamily L1871_08660 PF01593 Flavin containing amine oxidoreductase L1871_08665 PF03239 Iron permease FTR1 family L1871_08695 PF14403 Circularly permuted ATP-grasp type 2 L1871_08695 PF04168 A predicted alpha-helical domain with a conserved ER motif. L1871_08700 PF14403 Circularly permuted ATP-grasp type 2 L1871_08715 PF00916 Sulfate permease family L1871_08715 PF01740 STAS domain L1871_08730 PF13006 Insertion element 4 transposase N-terminal L1871_08730 PF01609 Transposase DDE domain L1871_08735 PF05638 Type VI secretion system effector, Hcp L1871_08740 PF04717 Type VI secretion system, phage-baseplate injector L1871_08750 PF03527 RHS protein L1871_08750 PF05593 RHS Repeat L1871_08765 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath L1871_08775 PF05947 Type VI secretion system, TssF L1871_08795 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE L1871_08805 PF10431 C-terminal, D2-small domain, of ClpB protein L1871_08805 PF17871 AAA lid domain L1871_08805 PF07724 AAA domain (Cdc48 subfamily) L1871_08805 PF00004 ATPase family associated with various cellular activities (AAA) L1871_08810 PF02954 Bacterial regulatory protein, Fis family L1871_08810 PF00158 Sigma-54 interaction domain L1871_08825 PF06761 Intracellular multiplication and human macrophage-killing L1871_08825 PF14331 ImcF-related N-terminal domain L1871_08825 PF06744 Type VI secretion protein IcmF C-terminal L1871_08840 PF04717 Type VI secretion system, phage-baseplate injector L1871_08855 PF05598 Transposase domain (DUF772) L1871_08855 PF01609 Transposase DDE domain L1871_08875 PF13247 4Fe-4S dicluster domain L1871_08880 PF03916 Polysulphide reductase, NrfD L1871_08885 PF00374 Nickel-dependent hydrogenase L1871_08890 PF01750 Hydrogenase maturation protease L1871_08895 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE L1871_08900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L1871_08905 PF00528 Binding-protein-dependent transport system inner membrane component L1871_08910 PF00528 Binding-protein-dependent transport system inner membrane component L1871_08910 PF12911 N-terminal TM domain of oligopeptide transport permease C L1871_08915 PF00005 ABC transporter L1871_08915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L1871_08920 PF08402 TOBE domain L1871_08920 PF00005 ABC transporter L1871_08925 PF02492 CobW/HypB/UreG, nucleotide-binding domain L1871_08950 PF00586 AIR synthase related protein, N-terminal domain L1871_08950 PF02769 AIR synthase related protein, C-terminal domain L1871_08955 PF01924 Hydrogenase formation hypA family L1871_08960 PF01455 HupF/HypC family L1871_08965 PF00708 Acylphosphatase L1871_08965 PF17788 HypF Kae1-like domain L1871_08965 PF01300 Telomere recombination L1871_08965 PF07503 HypF finger L1871_08970 PF13662 Toprim domain L1871_08970 PF02132 RecR protein L1871_08975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_08975 PF00183 Hsp90 protein L1871_08980 PF05191 Adenylate kinase, active site lid L1871_08985 PF00762 Ferrochelatase L1871_08990 PF01124 MAPEG family L1871_08995 PF00294 pfkB family carbohydrate kinase L1871_09000 PF00672 HAMP domain L1871_09000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_09000 PF17200 Single Cache domain 2 L1871_09015 PF00563 EAL domain L1871_09015 PF00990 Diguanylate cyclase, GGDEF domain L1871_09015 PF03707 Bacterial signalling protein N terminal repeat L1871_09020 PF00483 Nucleotidyl transferase L1871_09030 PF07273 Protein of unknown function (DUF1439) L1871_09035 PF00425 chorismate binding enzyme L1871_09040 PF00501 AMP-binding enzyme L1871_09040 PF13193 AMP-binding enzyme C-terminal domain L1871_09045 PF00857 Isochorismatase family L1871_09045 PF00550 Phosphopantetheine attachment site L1871_09050 PF00501 AMP-binding enzyme L1871_09050 PF13193 AMP-binding enzyme C-terminal domain L1871_09050 PF00668 Condensation domain L1871_09050 PF00550 Phosphopantetheine attachment site L1871_09050 PF00975 Thioesterase domain L1871_09060 PF00550 Phosphopantetheine attachment site L1871_09060 PF07993 Male sterility protein L1871_09060 PF00668 Condensation domain L1871_09060 PF13193 AMP-binding enzyme C-terminal domain L1871_09060 PF00501 AMP-binding enzyme L1871_09065 PF13193 AMP-binding enzyme C-terminal domain L1871_09065 PF00550 Phosphopantetheine attachment site L1871_09065 PF00668 Condensation domain L1871_09065 PF00975 Thioesterase domain L1871_09065 PF00501 AMP-binding enzyme L1871_09070 PF01497 Periplasmic binding protein L1871_09075 PF01648 4'-phosphopantetheinyl transferase superfamily L1871_09075 PF17837 4'-phosphopantetheinyl transferase N-terminal domain L1871_09080 PF00005 ABC transporter L1871_09085 PF01032 FecCD transport family L1871_09090 PF01032 FecCD transport family L1871_09095 PF00593 TonB dependent receptor L1871_09095 PF07715 TonB-dependent Receptor Plug Domain L1871_09110 PF11143 Protein of unknown function (DUF2919) L1871_09115 PF01544 CorA-like Mg2+ transporter protein L1871_09125 PF01012 Electron transfer flavoprotein domain L1871_09130 PF01012 Electron transfer flavoprotein domain L1871_09130 PF00766 Electron transfer flavoprotein FAD-binding domain L1871_09135 PF00266 Aminotransferase class-V L1871_09140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L1871_09145 PF00793 DAHP synthetase I family L1871_09150 PF03741 Integral membrane protein TerC family L1871_09160 PF08891 YfcL protein L1871_09165 PF00501 AMP-binding enzyme L1871_09170 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region L1871_09170 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L1871_09175 PF04172 LrgB-like family L1871_09180 PF03788 LrgA family L1871_09195 PF08411 Exonuclease C-terminal L1871_09195 PF00929 Exonuclease L1871_09205 PF05598 Transposase domain (DUF772) L1871_09205 PF01609 Transposase DDE domain L1871_09225 PF12911 N-terminal TM domain of oligopeptide transport permease C L1871_09225 PF00528 Binding-protein-dependent transport system inner membrane component L1871_09230 PF00005 ABC transporter L1871_09230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L1871_09235 PF07690 Major Facilitator Superfamily L1871_09245 PF05164 Cell division protein ZapA L1871_09250 PF03695 Uncharacterised protein family (UPF0149) L1871_09255 PF01494 FAD binding domain L1871_09260 PF01494 FAD binding domain L1871_09265 PF08669 Glycine cleavage T-protein C-terminal barrel domain L1871_09265 PF01571 Aminomethyltransferase folate-binding domain L1871_09270 PF01597 Glycine cleavage H-protein L1871_09275 PF02347 Glycine cleavage system P-protein L1871_09295 PF07690 Major Facilitator Superfamily L1871_09300 PF13192 Thioredoxin domain L1871_09300 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1871_09305 PF00578 AhpC/TSA family L1871_09305 PF10417 C-terminal domain of 1-Cys peroxiredoxin L1871_09310 PF00571 CBS domain L1871_09315 PF02547 Queuosine biosynthesis protein L1871_09320 PF01702 Queuine tRNA-ribosyltransferase L1871_09325 PF02699 Preprotein translocase subunit L1871_09330 PF13721 SecD export protein N-terminal TM region L1871_09330 PF07549 SecD/SecF GG Motif L1871_09330 PF02355 Protein export membrane protein L1871_09335 PF02355 Protein export membrane protein L1871_09335 PF07549 SecD/SecF GG Motif L1871_09340 PF00581 Rhodanese-like domain L1871_09345 PF07719 Tetratricopeptide repeat L1871_09345 PF13181 Tetratricopeptide repeat L1871_09350 PF01136 Peptidase family U32 L1871_09355 PF01136 Peptidase family U32 L1871_09360 PF02036 SCP-2 sterol transfer family L1871_09365 PF00588 SpoU rRNA Methylase family L1871_09370 PF02082 Transcriptional regulator L1871_09375 PF00266 Aminotransferase class-V L1871_09380 PF01592 NifU-like N terminal domain L1871_09385 PF01521 Iron-sulphur cluster biosynthesis L1871_09390 PF00226 DnaJ domain L1871_09390 PF07743 HSCB C-terminal oligomerisation domain L1871_09395 PF00012 Hsp70 protein L1871_09400 PF00111 2Fe-2S iron-sulfur cluster binding domain L1871_09405 PF12404 Peptidase L1871_09405 PF00883 Cytosol aminopeptidase family, catalytic domain L1871_09410 PF12404 Peptidase L1871_09410 PF00883 Cytosol aminopeptidase family, catalytic domain L1871_09415 PF00334 Nucleoside diphosphate kinase L1871_09420 PF04055 Radical SAM superfamily L1871_09430 PF13464 Domain of unknown function (DUF4115) L1871_09435 PF04551 GcpE protein L1871_09440 PF03129 Anticodon binding domain L1871_09440 PF13393 Histidyl-tRNA synthetase L1871_09445 PF09976 Tetratricopeptide repeat-like domain L1871_09450 PF13360 PQQ-like domain L1871_09455 PF01926 50S ribosome-binding GTPase L1871_09455 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal L1871_09460 PF07191 zinc-ribbons L1871_09465 PF01464 Transglycosylase SLT domain L1871_09465 PF00497 Bacterial extracellular solute-binding proteins, family 3 L1871_09470 PF02769 AIR synthase related protein, C-terminal domain L1871_09470 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain L1871_09470 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal L1871_09475 PF00361 Proton-conducting membrane transporter L1871_09480 PF00361 Proton-conducting membrane transporter L1871_09485 PF00361 Proton-conducting membrane transporter L1871_09485 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus L1871_09490 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L L1871_09495 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 L1871_09500 PF12838 4Fe-4S dicluster domain L1871_09505 PF00146 NADH dehydrogenase L1871_09510 PF00384 Molybdopterin oxidoreductase L1871_09510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain L1871_09510 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region L1871_09515 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit L1871_09515 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region L1871_09525 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit L1871_09525 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit L1871_09530 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit L1871_09535 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 L1871_09540 PF00691 OmpA family L1871_09540 PF13677 Membrane MotB of proton-channel complex MotA/MotB L1871_09545 PF01618 MotA/TolQ/ExbB proton channel family L1871_09565 PF04536 TPM domain L1871_09575 PF03411 Penicillin-insensitive murein endopeptidase L1871_09585 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) L1871_09590 PF00248 Aldo/keto reductase family L1871_09605 PF01212 Beta-eliminating lyase L1871_09615 PF00072 Response regulator receiver domain L1871_09615 PF00486 Transcriptional regulatory protein, C terminal L1871_09620 PF03466 LysR substrate binding domain L1871_09620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_09630 PF00563 EAL domain L1871_09630 PF00990 Diguanylate cyclase, GGDEF domain L1871_09630 PF03707 Bacterial signalling protein N terminal repeat L1871_09630 PF13188 PAS domain L1871_09635 PF03806 AbgT putative transporter family L1871_09660 PF07690 Major Facilitator Superfamily L1871_09665 PF03466 LysR substrate binding domain L1871_09665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_09670 PF00925 GTP cyclohydrolase II L1871_09675 PF02224 Cytidylate kinase L1871_09680 PF00575 S1 RNA binding domain L1871_09685 PF00216 Bacterial DNA-binding protein L1871_09695 PF18073 Rubredoxin metal binding domain L1871_09700 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family L1871_09715 PF06508 Queuosine biosynthesis protein QueC L1871_09720 PF04055 Radical SAM superfamily L1871_09725 PF12843 Putative quorum-sensing-regulated virulence factor L1871_09730 PF01923 Cobalamin adenosyltransferase L1871_09735 PF00816 H-NS histone family L1871_09740 PF03553 Na+/H+ antiporter family L1871_09745 PF00265 Thymidine kinase L1871_09755 PF10722 Putative bacterial sensory transduction regulator L1871_09765 PF00156 Phosphoribosyl transferase domain L1871_09780 PF08220 DeoR-like helix-turn-helix domain L1871_09780 PF00455 DeoR C terminal sensor domain L1871_09790 PF00141 Peroxidase L1871_09800 PF13657 HipA N-terminal domain L1871_09800 PF07804 HipA-like C-terminal domain L1871_09845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_09845 PF00672 HAMP domain L1871_09850 PF01609 Transposase DDE domain L1871_09850 PF05598 Transposase domain (DUF772) L1871_09855 PF08241 Methyltransferase domain L1871_09885 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain L1871_09885 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain L1871_09890 PF01053 Cys/Met metabolism PLP-dependent enzyme L1871_09900 PF13460 NAD(P)H-binding L1871_09905 PF03466 LysR substrate binding domain L1871_09905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_09910 PF02311 AraC-like ligand binding domain L1871_09910 PF12833 Helix-turn-helix domain L1871_09915 PF12792 CSS motif domain associated with EAL L1871_09915 PF00563 EAL domain L1871_09920 PF17158 Membrane-associated sensor, integral membrane domain L1871_09920 PF00990 Diguanylate cyclase, GGDEF domain L1871_09930 PF07715 TonB-dependent Receptor Plug Domain L1871_09930 PF00593 TonB dependent receptor L1871_09940 PF03466 LysR substrate binding domain L1871_09940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_09945 PF01717 Cobalamin-independent synthase, Catalytic domain L1871_09945 PF08267 Cobalamin-independent synthase, N-terminal domain L1871_09955 PF01743 Poly A polymerase head domain L1871_09955 PF00571 CBS domain L1871_09960 PF01266 FAD dependent oxidoreductase L1871_09965 PF04244 Deoxyribodipyrimidine photo-lyase-related protein L1871_09975 PF00768 D-alanyl-D-alanine carboxypeptidase L1871_09980 PF03918 Cytochrome C biogenesis protein L1871_09985 PF08534 Redoxin L1871_10005 PF03916 Polysulphide reductase, NrfD L1871_10010 PF13247 4Fe-4S dicluster domain L1871_10010 PF00037 4Fe-4S binding domain L1871_10015 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) L1871_10015 PF13435 Cytochrome c554 and c-prime L1871_10020 PF02335 Cytochrome c552 L1871_10025 PF13006 Insertion element 4 transposase N-terminal L1871_10025 PF01609 Transposase DDE domain L1871_10035 PF13183 4Fe-4S dicluster domain L1871_10035 PF02754 Cysteine-rich domain L1871_10045 PF00890 FAD binding domain L1871_10050 PF04324 BFD-like [2Fe-2S] binding domain L1871_10050 PF01266 FAD dependent oxidoreductase L1871_10055 PF02810 SEC-C motif L1871_10060 PF00672 HAMP domain L1871_10060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_10060 PF17200 Single Cache domain 2 L1871_10065 PF01047 MarR family L1871_10065 PF00480 ROK family L1871_10070 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain L1871_10070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_10070 PF00989 PAS fold L1871_10070 PF17203 Single cache domain 3 L1871_10075 PF00072 Response regulator receiver domain L1871_10080 PF01970 Tripartite tricarboxylate transporter TctA family L1871_10095 PF00497 Bacterial extracellular solute-binding proteins, family 3 L1871_10095 PF01464 Transglycosylase SLT domain L1871_10100 PF06826 Predicted Permease Membrane Region L1871_10100 PF02080 TrkA-C domain L1871_10110 PF04851 Type III restriction enzyme, res subunit L1871_10110 PF02151 UvrB/uvrC motif L1871_10110 PF17757 UvrB interaction domain L1871_10110 PF12344 Ultra-violet resistance protein B L1871_10110 PF00271 Helicase conserved C-terminal domain L1871_10120 PF09335 SNARE associated Golgi protein L1871_10125 PF02600 Disulfide bond formation protein DsbB L1871_10130 PF06450 Bacterial Na+/H+ antiporter B (NhaB) L1871_10135 PF00392 Bacterial regulatory proteins, gntR family L1871_10135 PF07840 FadR C-terminal domain L1871_10140 PF04293 SpoVR like protein L1871_10145 PF04285 Protein of unknown function (DUF444) L1871_10150 PF06798 PrkA serine protein kinase C-terminal domain L1871_10150 PF08298 PrkA AAA domain L1871_10155 PF00570 HRDC domain L1871_10155 PF09382 RQC domain L1871_10155 PF00270 DEAD/DEAH box helicase L1871_10155 PF00271 Helicase conserved C-terminal domain L1871_10155 PF16124 RecQ zinc-binding L1871_10160 PF00375 Sodium:dicarboxylate symporter family L1871_10165 PF03222 Tryptophan/tyrosine permease family L1871_10170 PF00293 NUDIX domain L1871_10175 PF04715 Anthranilate synthase component I, N terminal region L1871_10175 PF00425 chorismate binding enzyme L1871_10195 PF00343 Carbohydrate phosphorylase L1871_10210 PF00939 Sodium:sulfate symporter transmembrane region L1871_10215 PF00085 Thioredoxin L1871_10220 PF00672 HAMP domain L1871_10220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_10220 PF00512 His Kinase A (phospho-acceptor) domain L1871_10220 PF01627 Hpt domain L1871_10220 PF00072 Response regulator receiver domain L1871_10220 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) L1871_10225 PF00664 ABC transporter transmembrane region L1871_10225 PF00005 ABC transporter L1871_10230 PF00664 ABC transporter transmembrane region L1871_10230 PF00005 ABC transporter L1871_10250 PF01575 MaoC like domain L1871_10255 PF00561 alpha/beta hydrolase fold L1871_10255 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus L1871_10275 PF08543 Phosphomethylpyrimidine kinase L1871_10280 PF03992 Antibiotic biosynthesis monooxygenase L1871_10285 PF13673 Acetyltransferase (GNAT) domain L1871_10295 PF01928 CYTH domain L1871_10305 PF05598 Transposase domain (DUF772) L1871_10305 PF01609 Transposase DDE domain L1871_10315 PF00271 Helicase conserved C-terminal domain L1871_10315 PF00270 DEAD/DEAH box helicase L1871_10320 PF00255 Glutathione peroxidase L1871_10330 PF01820 D-ala D-ala ligase N-terminus L1871_10330 PF07478 D-ala D-ala ligase C-terminus L1871_10335 PF03942 DTW domain L1871_10340 PF01925 Sulfite exporter TauE/SafE L1871_10345 PF03466 LysR substrate binding domain L1871_10345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_10360 PF11398 Protein of unknown function (DUF2813) L1871_10400 PF00883 Cytosol aminopeptidase family, catalytic domain L1871_10400 PF02789 Cytosol aminopeptidase family, N-terminal domain L1871_10405 PF13419 Haloacid dehalogenase-like hydrolase L1871_10410 PF01546 Peptidase family M20/M25/M40 L1871_10410 PF07687 Peptidase dimerisation domain L1871_10420 PF00365 Phosphofructokinase L1871_10425 PF00121 Triosephosphate isomerase L1871_10430 PF02698 DUF218 domain L1871_10435 PF13847 Methyltransferase domain L1871_10440 PF03882 MukF winged-helix domain L1871_10440 PF17193 MukF C-terminal domain L1871_10440 PF17192 MukF middle domain L1871_10445 PF04288 MukE-like family L1871_10450 PF16330 MukB hinge domain L1871_10450 PF04310 MukB N-terminal L1871_10460 PF05036 Sporulation related domain L1871_10460 PF03330 Lytic transglycolase L1871_10480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_10480 PF03466 LysR substrate binding domain L1871_10485 PF01048 Phosphorylase superfamily L1871_10490 PF07670 Nucleoside recognition L1871_10490 PF07662 Na+ dependent nucleoside transporter C-terminus L1871_10490 PF01773 Na+ dependent nucleoside transporter N-terminus L1871_10495 PF01791 DeoC/LacD family aldolase L1871_10525 PF01810 LysE type translocator L1871_10535 PF08274 PhnA Zinc-Ribbon L1871_10535 PF03831 PhnA domain L1871_10545 PF08329 Chitinase A, N-terminal domain L1871_10545 PF00704 Glycosyl hydrolases family 18 L1871_10570 PF01713 Smr domain L1871_10575 PF05175 Methyltransferase small domain L1871_10580 PF01264 Chorismate synthase L1871_10590 PF00270 DEAD/DEAH box helicase L1871_10590 PF00271 Helicase conserved C-terminal domain L1871_10605 PF03222 Tryptophan/tyrosine permease family L1871_10610 PF00356 Bacterial regulatory proteins, lacI family L1871_10610 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family L1871_10615 PF00381 PTS HPr component phosphorylation site L1871_10615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L1871_10620 PF00294 pfkB family carbohydrate kinase L1871_10625 PF02378 Phosphotransferase system, EIIC L1871_10625 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L1871_10635 PF06945 Protein of unknown function (DUF1289) L1871_10640 PF03562 MltA specific insert domain L1871_10640 PF06725 3D domain L1871_10645 PF00111 2Fe-2S iron-sulfur cluster binding domain L1871_10650 PF00268 Ribonucleotide reductase, small chain L1871_10655 PF02867 Ribonucleotide reductase, barrel domain L1871_10655 PF03477 ATP cone domain L1871_10655 PF00317 Ribonucleotide reductase, all-alpha domain L1871_10660 PF13419 Haloacid dehalogenase-like hydrolase L1871_10670 PF03989 DNA gyrase C-terminal domain, beta-propeller L1871_10670 PF00521 DNA gyrase/topoisomerase IV, subunit A L1871_10680 PF04055 Radical SAM superfamily L1871_10695 PF03129 Anticodon binding domain L1871_10695 PF02824 TGS domain L1871_10695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L1871_10695 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L1871_10700 PF00707 Translation initiation factor IF-3, C-terminal domain L1871_10700 PF05198 Translation initiation factor IF-3, N-terminal domain L1871_10705 PF01632 Ribosomal protein L35 L1871_10710 PF00453 Ribosomal protein L20 L1871_10715 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain L1871_10715 PF01409 tRNA synthetases class II core domain (F) L1871_10720 PF03484 tRNA synthetase B5 domain L1871_10720 PF03483 B3/4 domain L1871_10720 PF03147 Ferredoxin-fold anticodon binding domain L1871_10720 PF01588 Putative tRNA binding domain L1871_10720 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain L1871_10725 PF00216 Bacterial DNA-binding protein L1871_10730 PF09456 RcsC Alpha-Beta-Loop (ABL) L1871_10730 PF00072 Response regulator receiver domain L1871_10730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_10730 PF00512 His Kinase A (phospho-acceptor) domain L1871_10745 PF02146 Sir2 family L1871_10760 PF12323 Helix-turn-helix domain L1871_10760 PF01385 Probable transposase L1871_10760 PF07282 Putative transposase DNA-binding domain L1871_10770 PF00356 Bacterial regulatory proteins, lacI family L1871_10775 PF00294 pfkB family carbohydrate kinase L1871_10780 PF13407 Periplasmic binding protein domain L1871_10785 PF02653 Branched-chain amino acid transport system / permease component L1871_10790 PF00005 ABC transporter L1871_10795 PF05025 RbsD / FucU transport protein family L1871_10810 PF07282 Putative transposase DNA-binding domain L1871_10810 PF01385 Probable transposase L1871_10810 PF12323 Helix-turn-helix domain L1871_10825 PF01171 PP-loop family L1871_10830 PF00582 Universal stress protein family L1871_10835 PF13545 Crp-like helix-turn-helix domain L1871_10835 PF00027 Cyclic nucleotide-binding domain L1871_10850 PF00403 Heavy-metal-associated domain L1871_10860 PF13442 Cytochrome C oxidase, cbb3-type, subunit III L1871_10860 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP L1871_10875 PF00115 Cytochrome C and Quinol oxidase polypeptide I L1871_10885 PF13185 GAF domain L1871_10890 PF04352 ProQ/FINO family L1871_10890 PF17516 ProQ C-terminal domain L1871_10895 PF17804 Tail specific protease N-terminal domain L1871_10895 PF11818 C-terminal domain of tail specific protease (DUF3340) L1871_10895 PF03572 Peptidase family S41 L1871_10895 PF00595 PDZ domain L1871_10900 PF11940 Domain of unknown function (DUF3458) Ig-like fold L1871_10900 PF17432 Domain of unknown function (DUF3458_C) ARM repeats L1871_10900 PF01433 Peptidase family M1 domain L1871_10910 PF05088 Bacterial NAD-glutamate dehydrogenase L1871_10915 PF01180 Dihydroorotate dehydrogenase L1871_10920 PF07126 Cell-division protein ZapC L1871_10925 PF10672 S-adenosylmethionine-dependent methyltransferase L1871_10925 PF02926 THUMP domain L1871_10925 PF01170 Putative RNA methylase family UPF0020 L1871_10935 PF12848 ABC transporter L1871_10935 PF00005 ABC transporter L1871_10935 PF16326 ABC transporter C-terminal domain L1871_10945 PF04957 Ribosome modulation factor L1871_10950 PF00376 MerR family regulatory protein L1871_10950 PF09278 MerR, DNA binding L1871_10955 PF02411 MerT mercuric transport protein L1871_10960 PF00403 Heavy-metal-associated domain L1871_10970 PF01526 Tn3 transposase DDE domain L1871_10970 PF13700 Domain of unknown function (DUF4158) L1871_10985 PF02796 Helix-turn-helix domain of resolvase L1871_10985 PF00239 Resolvase, N terminal domain L1871_10990 PF05052 MerE protein L1871_10995 PF13411 MerR HTH family regulatory protein L1871_11000 PF00403 Heavy-metal-associated domain L1871_11000 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1871_11000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L1871_11010 PF00403 Heavy-metal-associated domain L1871_11015 PF02411 MerT mercuric transport protein L1871_11020 PF00376 MerR family regulatory protein L1871_11020 PF09278 MerR, DNA binding L1871_11025 PF01548 Transposase L1871_11025 PF02371 Transposase IS116/IS110/IS902 family L1871_11030 PF00239 Resolvase, N terminal domain L1871_11030 PF02796 Helix-turn-helix domain of resolvase L1871_11035 PF18790 KfrB protein L1871_11040 PF08401 Domain of unknown function (DUF1738) L1871_11040 PF18818 Metallopeptidase superfamily domain L1871_11040 PF13362 Toprim domain L1871_11050 PF00665 Integrase core domain L1871_11055 PF01695 IstB-like ATP binding protein L1871_11060 PF01609 Transposase DDE domain L1871_11060 PF13808 DDE_Tnp_1-associated L1871_11065 PF00665 Integrase core domain L1871_11065 PF13936 Helix-turn-helix domain L1871_11070 PF13358 DDE superfamily endonuclease L1871_11070 PF13592 Winged helix-turn helix L1871_11075 PF01641 SelR domain L1871_11080 PF01625 Peptide methionine sulfoxide reductase L1871_11085 PF00043 Glutathione S-transferase, C-terminal domain L1871_11085 PF02798 Glutathione S-transferase, N-terminal domain L1871_11095 PF08240 Alcohol dehydrogenase GroES-like domain L1871_11095 PF00107 Zinc-binding dehydrogenase L1871_11115 PF00174 Oxidoreductase molybdopterin binding domain L1871_11120 PF00111 2Fe-2S iron-sulfur cluster binding domain L1871_11120 PF00970 Oxidoreductase FAD-binding domain L1871_11120 PF00175 Oxidoreductase NAD-binding domain L1871_11125 PF00462 Glutaredoxin L1871_11135 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase L1871_11140 PF01636 Phosphotransferase enzyme family L1871_11145 PF00239 Resolvase, N terminal domain L1871_11145 PF02796 Helix-turn-helix domain of resolvase L1871_11150 PF01526 Tn3 transposase DDE domain L1871_11150 PF13700 Domain of unknown function (DUF4158) L1871_11175 PF05598 Transposase domain (DUF772) L1871_11175 PF01609 Transposase DDE domain L1871_11205 PF05857 TraX protein L1871_11220 PF01548 Transposase L1871_11220 PF02371 Transposase IS116/IS110/IS902 family L1871_11230 PF03551 Transcriptional regulator PadR-like family L1871_11240 PF13610 DDE domain L1871_11255 PF01636 Phosphotransferase enzyme family L1871_11260 PF13610 DDE domain L1871_11265 PF02522 Aminoglycoside 3-N-acetyltransferase L1871_11310 PF02796 Helix-turn-helix domain of resolvase L1871_11310 PF00239 Resolvase, N terminal domain L1871_11315 PF13495 Phage integrase, N-terminal SAM-like domain L1871_11315 PF00589 Phage integrase family L1871_11325 PF00905 Penicillin binding protein transpeptidase domain L1871_11330 PF00132 Bacterial transferase hexapeptide (six repeats) L1871_11340 PF00893 Small Multidrug Resistance protein L1871_11345 PF00809 Pterin binding enzyme L1871_11360 PF13610 DDE domain L1871_11400 PF01966 HD domain L1871_11400 PF11871 Domain of unknown function (DUF3391) L1871_11410 PF07977 FabA-like domain L1871_11415 PF13654 AAA domain L1871_11415 PF05362 Lon protease (S16) C-terminal proteolytic domain L1871_11425 PF07130 YebG protein L1871_11435 PF04403 Paraquat-inducible protein A L1871_11440 PF02470 MlaD protein L1871_11445 PF01189 16S rRNA methyltransferase RsmB/F L1871_11445 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF L1871_11445 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF L1871_11455 PF00589 Phage integrase family L1871_11460 PF01026 TatD related DNase L1871_11465 PF09115 DNA polymerase III, delta subunit, C terminal L1871_11470 PF02223 Thymidylate kinase L1871_11475 PF02618 YceG-like family L1871_11480 PF01063 Amino-transferase class IV L1871_11485 PF00109 Beta-ketoacyl synthase, N-terminal domain L1871_11485 PF02801 Beta-ketoacyl synthase, C-terminal domain L1871_11490 PF00550 Phosphopantetheine attachment site L1871_11500 PF00698 Acyl transferase domain L1871_11505 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III L1871_11505 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal L1871_11510 PF02504 Fatty acid synthesis protein L1871_11515 PF01783 Ribosomal L32p protein family L1871_11520 PF02620 Large ribosomal RNA subunit accumulation protein YceD L1871_11530 PF02545 Maf-like protein L1871_11535 PF01479 S4 domain L1871_11535 PF00849 RNA pseudouridylate synthase L1871_11540 PF00575 S1 RNA binding domain L1871_11540 PF10150 Ribonuclease E/G family L1871_11540 PF12111 Polyribonucleotide phosphorylase C terminal L1871_11545 PF01384 Phosphate transporter family L1871_11550 PF00692 dUTPase L1871_11555 PF00485 Phosphoribulokinase / Uridine kinase family L1871_11560 PF10609 NUBPL iron-transfer P-loop NTPase L1871_11565 PF09334 tRNA synthetases class I (M) L1871_11565 PF01588 Putative tRNA binding domain L1871_11565 PF08264 Anticodon-binding domain of tRNA L1871_11575 PF00708 Acylphosphatase L1871_11580 PF00672 HAMP domain L1871_11580 PF12729 Four helix bundle sensory module for signal transduction L1871_11580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_11585 PF10672 S-adenosylmethionine-dependent methyltransferase L1871_11585 PF17785 PUA-like domain L1871_11600 PF00586 AIR synthase related protein, N-terminal domain L1871_11600 PF02769 AIR synthase related protein, C-terminal domain L1871_11610 PF00753 Metallo-beta-lactamase superfamily L1871_11615 PF00072 Response regulator receiver domain L1871_11620 PF00512 His Kinase A (phospho-acceptor) domain L1871_11620 PF01627 Hpt domain L1871_11620 PF00072 Response regulator receiver domain L1871_11620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) L1871_11620 PF00672 HAMP domain L1871_11620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_11625 PF00072 Response regulator receiver domain L1871_11625 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) L1871_11625 PF01627 Hpt domain L1871_11625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_11625 PF00672 HAMP domain L1871_11625 PF00512 His Kinase A (phospho-acceptor) domain L1871_11630 PF01386 Ribosomal L25p family L1871_11640 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold L1871_11640 PF00270 DEAD/DEAH box helicase L1871_11640 PF11898 Domain of unknown function (DUF3418) L1871_11640 PF04408 Helicase associated domain (HA2) L1871_11640 PF00271 Helicase conserved C-terminal domain L1871_11645 PF02272 DHHA1 domain L1871_11645 PF01368 DHH family L1871_11645 PF01743 Poly A polymerase head domain L1871_11645 PF00571 CBS domain L1871_11650 PF00196 Bacterial regulatory proteins, luxR family L1871_11650 PF00072 Response regulator receiver domain L1871_11655 PF07670 Nucleoside recognition L1871_11665 PF05726 Pirin C-terminal cupin domain L1871_11665 PF02678 Pirin L1871_11675 PF13610 DDE domain L1871_11695 PF01526 Tn3 transposase DDE domain L1871_11695 PF13700 Domain of unknown function (DUF4158) L1871_11700 PF02796 Helix-turn-helix domain of resolvase L1871_11700 PF00239 Resolvase, N terminal domain L1871_11725 PF00893 Small Multidrug Resistance protein L1871_11745 PF13610 DDE domain L1871_11750 PF02909 Tetracyclin repressor-like, C-terminal domain L1871_11750 PF00440 Bacterial regulatory proteins, tetR family L1871_11755 PF07690 Major Facilitator Superfamily L1871_11765 PF00589 Phage integrase family L1871_11770 PF13610 DDE domain L1871_11780 PF02796 Helix-turn-helix domain of resolvase L1871_11780 PF00239 Resolvase, N terminal domain L1871_11785 PF01526 Tn3 transposase DDE domain L1871_11785 PF13700 Domain of unknown function (DUF4158) L1871_11790 PF01548 Transposase L1871_11790 PF02371 Transposase IS116/IS110/IS902 family L1871_11795 PF02678 Pirin L1871_11795 PF05726 Pirin C-terminal cupin domain L1871_11800 PF03466 LysR substrate binding domain L1871_11800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_11805 PF02575 YbaB/EbfC DNA-binding family L1871_11810 PF12169 DNA polymerase III subunits gamma and tau domain III L1871_11810 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding L1871_11810 PF12170 DNA polymerase III tau subunit V interacting with alpha L1871_11815 PF00156 Phosphoribosyl transferase domain L1871_11820 PF04304 Protein of unknown function (DUF454) L1871_11825 PF01207 Dihydrouridine synthase (Dus) L1871_11835 PF00892 EamA-like transporter family L1871_11845 PF01612 3'-5' exonuclease L1871_11845 PF00570 HRDC domain L1871_11850 PF13193 AMP-binding enzyme C-terminal domain L1871_11850 PF00501 AMP-binding enzyme L1871_11855 PF00561 alpha/beta hydrolase fold L1871_11865 PF00814 Glycoprotease family L1871_11870 PF13307 Helicase C-terminal domain L1871_11870 PF04851 Type III restriction enzyme, res subunit L1871_11880 PF08029 HisG, C-terminal domain L1871_11880 PF01634 ATP phosphoribosyltransferase L1871_11885 PF00815 Histidinol dehydrogenase L1871_11890 PF00155 Aminotransferase class I and II L1871_11895 PF00475 Imidazoleglycerol-phosphate dehydratase L1871_11895 PF08645 Polynucleotide kinase 3 phosphatase L1871_11900 PF00117 Glutamine amidotransferase class-I L1871_11905 PF00977 Histidine biosynthesis protein L1871_11910 PF00072 Response regulator receiver domain L1871_11920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_11920 PF00512 His Kinase A (phospho-acceptor) domain L1871_11920 PF01627 Hpt domain L1871_11920 PF00072 Response regulator receiver domain L1871_11925 PF00977 Histidine biosynthesis protein L1871_11930 PF01502 Phosphoribosyl-AMP cyclohydrolase L1871_11930 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase L1871_11940 PF13280 WYL domain L1871_11940 PF08279 HTH domain L1871_11950 PF05433 Glycine zipper 2TM domain L1871_11965 PF01032 FecCD transport family L1871_11970 PF00005 ABC transporter L1871_11975 PF07690 Major Facilitator Superfamily L1871_11995 PF07152 YaeQ protein L1871_12005 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain L1871_12005 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain L1871_12005 PF00378 Enoyl-CoA hydratase/isomerase L1871_12010 PF02803 Thiolase, C-terminal domain L1871_12010 PF00108 Thiolase, N-terminal domain L1871_12015 PF17863 AAA lid domain L1871_12015 PF07726 ATPase family associated with various cellular activities (AAA) L1871_12020 PF01882 Protein of unknown function DUF58 L1871_12045 PF08281 Sigma-70, region 4 L1871_12045 PF04542 Sigma-70 region 2 L1871_12055 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) L1871_12060 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) L1871_12065 PF00563 EAL domain L1871_12065 PF08668 HDOD domain L1871_12070 PF02803 Thiolase, C-terminal domain L1871_12070 PF00108 Thiolase, N-terminal domain L1871_12075 PF00376 MerR family regulatory protein L1871_12075 PF09278 MerR, DNA binding L1871_12080 PF00375 Sodium:dicarboxylate symporter family L1871_12085 PF06865 Pyrimidine/purine nucleoside phosphorylase L1871_12090 PF03313 Serine dehydratase alpha chain L1871_12090 PF03315 Serine dehydratase beta chain L1871_12095 PF03313 Serine dehydratase alpha chain L1871_12095 PF03315 Serine dehydratase beta chain L1871_12100 PF13406 Transglycosylase SLT domain L1871_12105 PF05166 YcgL domain L1871_12110 PF03775 Septum formation inhibitor MinC, C-terminal domain L1871_12110 PF05209 Septum formation inhibitor MinC, N-terminal domain L1871_12115 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain L1871_12120 PF03776 Septum formation topological specificity factor MinE L1871_12125 PF04269 Protein of unknown function, DUF440 L1871_12130 PF00912 Transglycosylase L1871_12135 PF04269 Protein of unknown function, DUF440 L1871_12145 PF17783 CvfB-like winged helix domain L1871_12145 PF13509 S1 domain L1871_12170 PF02525 Flavodoxin-like fold L1871_12175 PF00892 EamA-like transporter family L1871_12180 PF01370 NAD dependent epimerase/dehydratase family L1871_12180 PF02222 ATP-grasp domain L1871_12185 PF13419 Haloacid dehalogenase-like hydrolase L1871_12200 PF00677 Lumazine binding domain L1871_12205 PF06786 Uncharacterised protein family (UPF0253) L1871_12210 PF01554 MatE L1871_12240 PF00136 DNA polymerase family B L1871_12240 PF03104 DNA polymerase family B, exonuclease domain L1871_12245 PF02678 Pirin L1871_12245 PF05726 Pirin C-terminal cupin domain L1871_12255 PF03279 Bacterial lipid A biosynthesis acyltransferase L1871_12260 PF03279 Bacterial lipid A biosynthesis acyltransferase L1871_12270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_12270 PF03466 LysR substrate binding domain L1871_12275 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L1871_12275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L1871_12280 PF01261 Xylose isomerase-like TIM barrel L1871_12285 PF00990 Diguanylate cyclase, GGDEF domain L1871_12290 PF00933 Glycosyl hydrolase family 3 N terminal domain L1871_12300 PF03466 LysR substrate binding domain L1871_12300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_12310 PF00232 Glycosyl hydrolase family 1 L1871_12315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_12315 PF03466 LysR substrate binding domain L1871_12320 PF00990 Diguanylate cyclase, GGDEF domain L1871_12320 PF00072 Response regulator receiver domain L1871_12325 PF00384 Molybdopterin oxidoreductase L1871_12330 PF02634 FdhD/NarQ family L1871_12345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_12345 PF03466 LysR substrate binding domain L1871_12350 PF13407 Periplasmic binding protein domain L1871_12355 PF00005 ABC transporter L1871_12360 PF02653 Branched-chain amino acid transport system / permease component L1871_12365 PF02653 Branched-chain amino acid transport system / permease component L1871_12370 PF12706 Beta-lactamase superfamily domain L1871_12380 PF01925 Sulfite exporter TauE/SafE L1871_12385 PF13520 Amino acid permease L1871_12395 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase L1871_12395 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase L1871_12400 PF00378 Enoyl-CoA hydratase/isomerase L1871_12405 PF00378 Enoyl-CoA hydratase/isomerase L1871_12410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L1871_12410 PF02770 Acyl-CoA dehydrogenase, middle domain L1871_12410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L1871_12415 PF00171 Aldehyde dehydrogenase family L1871_12420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L1871_12420 PF02770 Acyl-CoA dehydrogenase, middle domain L1871_12420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L1871_12425 PF01039 Carboxyl transferase domain L1871_12430 PF00378 Enoyl-CoA hydratase/isomerase L1871_12435 PF00364 Biotin-requiring enzyme L1871_12435 PF02785 Biotin carboxylase C-terminal domain L1871_12435 PF00289 Biotin carboxylase, N-terminal domain L1871_12435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L1871_12440 PF00682 HMGL-like L1871_12445 PF09278 MerR, DNA binding L1871_12445 PF00376 MerR family regulatory protein L1871_12455 PF01184 GPR1/FUN34/yaaH family L1871_12460 PF06167 Glucose-regulated metallo-peptidase M90 L1871_12470 PF01235 Sodium:alanine symporter family L1871_12475 PF00378 Enoyl-CoA hydratase/isomerase L1871_12490 PF04341 Protein of unknown function, DUF485 L1871_12495 PF00474 Sodium:solute symporter family L1871_12500 PF00005 ABC transporter L1871_12500 PF12848 ABC transporter L1871_12505 PF13145 PPIC-type PPIASE domain L1871_12510 PF00216 Bacterial DNA-binding protein L1871_12515 PF05362 Lon protease (S16) C-terminal proteolytic domain L1871_12515 PF02190 ATP-dependent protease La (LON) substrate-binding domain L1871_12515 PF00004 ATPase family associated with various cellular activities (AAA) L1871_12520 PF10431 C-terminal, D2-small domain, of ClpB protein L1871_12520 PF06689 ClpX C4-type zinc finger L1871_12520 PF07724 AAA domain (Cdc48 subfamily) L1871_12525 PF00574 Clp protease L1871_12530 PF05697 Bacterial trigger factor protein (TF) L1871_12530 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L1871_12530 PF05698 Bacterial trigger factor protein (TF) C-terminus L1871_12545 PF12704 MacB-like periplasmic core domain L1871_12545 PF02687 FtsX-like permease family L1871_12550 PF00005 ABC transporter L1871_12555 PF12704 MacB-like periplasmic core domain L1871_12555 PF02687 FtsX-like permease family L1871_12565 PF03461 TRCF domain L1871_12565 PF00271 Helicase conserved C-terminal domain L1871_12565 PF00270 DEAD/DEAH box helicase L1871_12565 PF02559 CarD-like/TRCF domain L1871_12565 PF17757 UvrB interaction domain L1871_12570 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain L1871_12580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L1871_12585 PF00892 EamA-like transporter family L1871_12590 PF01610 Transposase L1871_12590 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 L1871_12590 PF13542 Helix-turn-helix domain of transposase family ISL3 L1871_12600 PF00300 Histidine phosphatase superfamily (branch 1) L1871_12605 PF00675 Insulinase (Peptidase family M16) L1871_12605 PF05193 Peptidase M16 inactive domain L1871_12605 PF16187 Middle or third domain of peptidase_M16 L1871_12610 PF05724 Thiopurine S-methyltransferase (TPMT) L1871_12620 PF01047 MarR family L1871_12640 PF02805 Metal binding domain of Ada L1871_12640 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain L1871_12640 PF12833 Helix-turn-helix domain L1871_12640 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain L1871_12645 PF07693 KAP family P-loop domain L1871_12655 PF13006 Insertion element 4 transposase N-terminal L1871_12655 PF01609 Transposase DDE domain L1871_12660 PF02540 NAD synthase L1871_12660 PF00958 GMP synthase C terminal domain L1871_12660 PF00117 Glutamine amidotransferase class-I L1871_12665 PF00571 CBS domain L1871_12665 PF00478 IMP dehydrogenase / GMP reductase domain L1871_12675 PF00128 Alpha amylase, catalytic domain L1871_12675 PF03423 Carbohydrate binding domain (family 25) L1871_12675 PF01373 Glycosyl hydrolase family 14 L1871_12685 PF02601 Exonuclease VII, large subunit L1871_12685 PF13742 OB-fold nucleic acid binding domain L1871_12690 PF04055 Radical SAM superfamily L1871_12700 PF00990 Diguanylate cyclase, GGDEF domain L1871_12700 PF00563 EAL domain L1871_12700 PF03707 Bacterial signalling protein N terminal repeat L1871_12705 PF13689 YfiR/HmsC-like L1871_12710 PF00158 Sigma-54 interaction domain L1871_12710 PF18024 Helix-turn-helix domain L1871_12715 PF01329 Pterin 4 alpha carbinolamine dehydratase L1871_12720 PF00351 Biopterin-dependent aromatic amino acid hydroxylase L1871_12725 PF05128 Domain of unknown function (DUF697) L1871_12730 PF04317 YcjX-like family, DUF463 L1871_12740 PF06667 Phage shock protein B L1871_12745 PF04012 PspA/IM30 family L1871_12750 PF00158 Sigma-54 interaction domain L1871_12750 PF02954 Bacterial regulatory protein, Fis family L1871_12755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L1871_12760 PF00528 Binding-protein-dependent transport system inner membrane component L1871_12765 PF12911 N-terminal TM domain of oligopeptide transport permease C L1871_12765 PF00528 Binding-protein-dependent transport system inner membrane component L1871_12770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L1871_12770 PF00005 ABC transporter L1871_12775 PF00005 ABC transporter L1871_12780 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) L1871_12785 PF00356 Bacterial regulatory proteins, lacI family L1871_12790 PF02378 Phosphotransferase system, EIIC L1871_12790 PF00367 phosphotransferase system, EIIB L1871_12795 PF00232 Glycosyl hydrolase family 1 L1871_12800 PF00156 Phosphoribosyl transferase domain L1871_12805 PF02674 Colicin V production protein L1871_12810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L1871_12810 PF02403 Seryl-tRNA synthetase N-terminal domain L1871_12815 PF12002 MgsA AAA+ ATPase C terminal L1871_12815 PF16193 AAA C-terminal domain L1871_12815 PF00004 ATPase family associated with various cellular activities (AAA) L1871_12820 PF03548 Outer membrane lipoprotein carrier protein LolA L1871_12825 PF17854 FtsK alpha domain L1871_12825 PF09397 Ftsk gamma domain L1871_12825 PF13491 4TM region of DNA translocase FtsK/SpoIIIE L1871_12825 PF01580 FtsK/SpoIIIE family L1871_12830 PF01037 Lrp/AsnC ligand binding domain L1871_12835 PF05222 Alanine dehydrogenase/PNT, N-terminal domain L1871_12835 PF01262 Alanine dehydrogenase/PNT, C-terminal domain L1871_12840 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1871_12845 PF00990 Diguanylate cyclase, GGDEF domain L1871_12850 PF05433 Glycine zipper 2TM domain L1871_12855 PF03588 Leucyl/phenylalanyl-tRNA protein transferase L1871_12860 PF04377 Arginine-tRNA-protein transferase, C terminus L1871_12860 PF04376 Arginine-tRNA-protein transferase, N terminus L1871_12865 PF01176 Translation initiation factor 1A / IF-1 L1871_12870 PF17871 AAA lid domain L1871_12870 PF07724 AAA domain (Cdc48 subfamily) L1871_12870 PF10431 C-terminal, D2-small domain, of ClpB protein L1871_12870 PF02861 Clp amino terminal domain, pathogenicity island component L1871_12870 PF00004 ATPase family associated with various cellular activities (AAA) L1871_12875 PF02617 ATP-dependent Clp protease adaptor protein ClpS L1871_12880 PF00313 'Cold-shock' DNA-binding domain L1871_12885 PF01118 Semialdehyde dehydrogenase, NAD binding domain L1871_12885 PF02774 Semialdehyde dehydrogenase, dimerisation domain L1871_12890 PF00893 Small Multidrug Resistance protein L1871_12895 PF13006 Insertion element 4 transposase N-terminal L1871_12895 PF01609 Transposase DDE domain L1871_12905 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding L1871_12905 PF18381 YcaO cyclodehydratase C-terminal domain L1871_12910 PF01226 Formate/nitrite transporter L1871_12915 PF01228 Glycine radical L1871_12915 PF02901 Pyruvate formate lyase-like L1871_12920 PF03692 Putative zinc- or iron-chelating domain L1871_12950 PF02629 CoA binding domain L1871_12950 PF00549 CoA-ligase L1871_12955 PF08442 ATP-grasp domain L1871_12955 PF00549 CoA-ligase L1871_12960 PF00364 Biotin-requiring enzyme L1871_12960 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L1871_12960 PF02817 e3 binding domain L1871_12965 PF16870 2-oxoglutarate dehydrogenase C-terminal L1871_12965 PF16078 2-oxoglutarate dehydrogenase N-terminus L1871_12965 PF00676 Dehydrogenase E1 component L1871_12965 PF02779 Transketolase, pyrimidine binding domain L1871_12970 PF13085 2Fe-2S iron-sulfur cluster binding domain L1871_12975 PF02910 Fumarate reductase flavoprotein C-term L1871_12975 PF00890 FAD binding domain L1871_12980 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit L1871_12985 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit L1871_12990 PF00285 Citrate synthase, C-terminal domain L1871_13005 PF02801 Beta-ketoacyl synthase, C-terminal domain L1871_13005 PF00109 Beta-ketoacyl synthase, N-terminal domain L1871_13010 PF01266 FAD dependent oxidoreductase L1871_13010 PF05430 S-adenosyl-L-methionine-dependent methyltransferase L1871_13020 PF03606 C4-dicarboxylate anaerobic carrier L1871_13035 PF01863 Protein of unknown function DUF45 L1871_13050 PF01197 Ribosomal protein L31 L1871_13055 PF00444 Ribosomal protein L36 L1871_13060 PF02311 AraC-like ligand binding domain L1871_13060 PF12833 Helix-turn-helix domain L1871_13065 PF02653 Branched-chain amino acid transport system / permease component L1871_13070 PF00005 ABC transporter L1871_13075 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family L1871_13080 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L1871_13085 PF00596 Class II Aldolase and Adducin N-terminal domain L1871_13090 PF02610 L-arabinose isomerase L1871_13090 PF11762 L-arabinose isomerase C-terminal domain L1871_13100 PF04851 Type III restriction enzyme, res subunit L1871_13100 PF02151 UvrB/uvrC motif L1871_13100 PF12344 Ultra-violet resistance protein B L1871_13100 PF17757 UvrB interaction domain L1871_13100 PF00271 Helicase conserved C-terminal domain L1871_13105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_13105 PF03466 LysR substrate binding domain L1871_13110 PF00155 Aminotransferase class I and II L1871_13115 PF00795 Carbon-nitrogen hydrolase L1871_13120 PF00497 Bacterial extracellular solute-binding proteins, family 3 L1871_13130 PF03706 Lysylphosphatidylglycerol synthase TM region L1871_13130 PF09924 Uncharacterised conserved protein (DUF2156) L1871_13135 PF00149 Calcineurin-like phosphoesterase L1871_13145 PF02887 Pyruvate kinase, alpha/beta domain L1871_13145 PF00224 Pyruvate kinase, barrel domain L1871_13150 PF07745 Glycosyl hydrolase family 53 L1871_13155 PF00367 phosphotransferase system, EIIB L1871_13155 PF02378 Phosphotransferase system, EIIC L1871_13160 PF02449 Beta-galactosidase L1871_13160 PF08533 Beta-galactosidase C-terminal domain L1871_13160 PF08532 Beta-galactosidase trimerisation domain L1871_13165 PF07745 Glycosyl hydrolase family 53 L1871_13170 PF00528 Binding-protein-dependent transport system inner membrane component L1871_13175 PF00528 Binding-protein-dependent transport system inner membrane component L1871_13180 PF13416 Bacterial extracellular solute-binding protein L1871_13185 PF17912 MalK OB fold domain L1871_13185 PF00005 ABC transporter L1871_13190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_13190 PF00672 HAMP domain L1871_13215 PF02264 LamB porin L1871_13220 PF00356 Bacterial regulatory proteins, lacI family L1871_13225 PF16363 GDP-mannose 4,6 dehydratase L1871_13230 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain L1871_13230 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain L1871_13235 PF00288 GHMP kinases N terminal domain L1871_13235 PF10509 Galactokinase galactose-binding signature L1871_13235 PF08544 GHMP kinases C terminal L1871_13245 PF00043 Glutathione S-transferase, C-terminal domain L1871_13245 PF02798 Glutathione S-transferase, N-terminal domain L1871_13265 PF00459 Inositol monophosphatase family L1871_13270 PF18393 MotY N-terminal domain L1871_13270 PF00691 OmpA family L1871_13275 PF12729 Four helix bundle sensory module for signal transduction L1871_13275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_13275 PF00672 HAMP domain L1871_13280 PF00929 Exonuclease L1871_13285 PF13726 Na+-H+ antiporter family L1871_13285 PF03553 Na+/H+ antiporter family L1871_13290 PF07690 Major Facilitator Superfamily L1871_13295 PF03466 LysR substrate binding domain L1871_13295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_13300 PF00563 EAL domain L1871_13300 PF08448 PAS fold L1871_13300 PF08447 PAS fold L1871_13300 PF00990 Diguanylate cyclase, GGDEF domain L1871_13315 PF00271 Helicase conserved C-terminal domain L1871_13315 PF00270 DEAD/DEAH box helicase L1871_13315 PF03880 DbpA RNA binding domain L1871_13320 PF03061 Thioesterase superfamily L1871_13330 PF13183 4Fe-4S dicluster domain L1871_13330 PF01565 FAD binding domain L1871_13330 PF02913 FAD linked oxidases, C-terminal domain L1871_13340 PF03741 Integral membrane protein TerC family L1871_13340 PF03471 Transporter associated domain L1871_13345 PF00724 NADH:flavin oxidoreductase / NADH oxidase family L1871_13350 PF08240 Alcohol dehydrogenase GroES-like domain L1871_13350 PF00107 Zinc-binding dehydrogenase L1871_13355 PF00962 Adenosine/AMP deaminase L1871_13360 PF13344 Haloacid dehalogenase-like hydrolase L1871_13370 PF00733 Asparagine synthase L1871_13370 PF13537 Glutamine amidotransferase domain L1871_13385 PF14497 Glutathione S-transferase, C-terminal domain L1871_13385 PF02798 Glutathione S-transferase, N-terminal domain L1871_13395 PF04209 homogentisate 1,2-dioxygenase L1871_13400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L1871_13410 PF00849 RNA pseudouridylate synthase L1871_13415 PF00563 EAL domain L1871_13415 PF00990 Diguanylate cyclase, GGDEF domain L1871_13415 PF13426 PAS domain L1871_13420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_13420 PF12729 Four helix bundle sensory module for signal transduction L1871_13420 PF00672 HAMP domain L1871_13430 PF00285 Citrate synthase, C-terminal domain L1871_13435 PF00330 Aconitase family (aconitate hydratase) L1871_13435 PF00694 Aconitase C-terminal domain L1871_13440 PF04303 PrpF protein L1871_13450 PF07715 TonB-dependent Receptor Plug Domain L1871_13450 PF07660 Secretin and TonB N terminus short domain L1871_13450 PF00593 TonB dependent receptor L1871_13460 PF01027 Inhibitor of apoptosis-promoting Bax1 L1871_13470 PF12805 FUSC-like inner membrane protein yccS L1871_13475 PF04358 DsrC like protein L1871_13480 PF05036 Sporulation related domain L1871_13485 PF08245 Mur ligase middle domain L1871_13485 PF02875 Mur ligase family, glutamate ligase domain L1871_13490 PF17848 Acetyl-coA carboxylase zinc finger domain L1871_13490 PF01039 Carboxyl transferase domain L1871_13495 PF01416 tRNA pseudouridine synthase L1871_13505 PF01118 Semialdehyde dehydrogenase, NAD binding domain L1871_13505 PF02774 Semialdehyde dehydrogenase, dimerisation domain L1871_13510 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain L1871_13510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L1871_13510 PF11890 Domain of unknown function (DUF3410) L1871_13520 PF03180 NLPA lipoprotein L1871_13545 PF00005 ABC transporter L1871_13550 PF00391 PEP-utilising enzyme, mobile domain L1871_13550 PF02896 PEP-utilising enzyme, TIM barrel domain L1871_13550 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain L1871_13555 PF03618 Kinase/pyrophosphorylase L1871_13565 PF00324 Amino acid permease L1871_13570 PF13006 Insertion element 4 transposase N-terminal L1871_13570 PF01609 Transposase DDE domain L1871_13610 PF03412 Peptidase C39 family L1871_13610 PF00005 ABC transporter L1871_13610 PF00664 ABC transporter transmembrane region L1871_13615 PF04055 Radical SAM superfamily L1871_13615 PF16199 Radical_SAM C-terminal domain L1871_13620 PF00310 Glutamine amidotransferases class-II L1871_13620 PF04898 Glutamate synthase central domain L1871_13620 PF01645 Conserved region in glutamate synthase L1871_13620 PF01493 GXGXG motif L1871_13625 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster L1871_13625 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1871_13645 PF14521 Lysine-specific metallo-endopeptidase L1871_13655 PF00270 DEAD/DEAH box helicase L1871_13655 PF00271 Helicase conserved C-terminal domain L1871_13675 PF08378 Nuclease-related domain L1871_13680 PF07759 Protein of unknown function (DUF1615) L1871_13685 PF00990 Diguanylate cyclase, GGDEF domain L1871_13690 PF00682 HMGL-like L1871_13690 PF08502 LeuA allosteric (dimerisation) domain L1871_13695 PF02142 MGS-like domain L1871_13695 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L1871_13695 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain L1871_13700 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain L1871_13700 PF00117 Glutamine amidotransferase class-I L1871_13710 PF05173 Dihydrodipicolinate reductase, C-terminus L1871_13710 PF01113 Dihydrodipicolinate reductase, N-terminus L1871_13720 PF01812 5-formyltetrahydrofolate cyclo-ligase family L1871_13725 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) L1871_13730 PF01842 ACT domain L1871_13730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain L1871_13730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L1871_13735 PF01219 Prokaryotic diacylglycerol kinase L1871_13740 PF00793 DAHP synthetase I family L1871_13745 PF00005 ABC transporter L1871_13750 PF01032 FecCD transport family L1871_13765 PF00437 Type II/IV secretion system protein L1871_13775 PF17910 FeoB cytosolic helical domain L1871_13775 PF02421 Ferrous iron transport protein B L1871_13775 PF07670 Nucleoside recognition L1871_13775 PF07664 Ferrous iron transport protein B C terminus L1871_13785 PF01253 Translation initiation factor SUI1 L1871_13790 PF01169 Uncharacterized protein family UPF0016 L1871_13825 PF13185 GAF domain L1871_13825 PF00990 Diguanylate cyclase, GGDEF domain L1871_13840 PF09190 DALR domain L1871_13840 PF01406 tRNA synthetases class I (C) catalytic domain L1871_13845 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD L1871_13855 PF00149 Calcineurin-like phosphoesterase L1871_13860 PF04226 Transglycosylase associated protein L1871_13865 PF16925 Tetracyclin repressor-like, C-terminal domain L1871_13865 PF00440 Bacterial regulatory proteins, tetR family L1871_13870 PF08240 Alcohol dehydrogenase GroES-like domain L1871_13870 PF00107 Zinc-binding dehydrogenase L1871_13880 PF01979 Amidohydrolase family L1871_13885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_13885 PF03466 LysR substrate binding domain L1871_13890 PF02661 Fic/DOC family L1871_13890 PF13784 Fic/DOC family N-terminal L1871_13930 PF01066 CDP-alcohol phosphatidyltransferase L1871_13935 PF01541 GIY-YIG catalytic domain L1871_13935 PF02151 UvrB/uvrC motif L1871_13935 PF08459 UvrC Helix-hairpin-helix N-terminal L1871_13940 PF00196 Bacterial regulatory proteins, luxR family L1871_13940 PF00072 Response regulator receiver domain L1871_13945 PF02348 Cytidylyltransferase L1871_13950 PF03966 Trm112p-like protein L1871_13955 PF02606 Tetraacyldisaccharide-1-P 4'-kinase L1871_13960 PF00005 ABC transporter L1871_13960 PF00664 ABC transporter transmembrane region L1871_13980 PF05872 Bacterial protein of unknown function (DUF853) L1871_13985 PF00155 Aminotransferase class I and II L1871_13995 PF13609 Gram-negative porin L1871_14000 PF06733 DEAD_2 L1871_14000 PF13307 Helicase C-terminal domain L1871_14010 PF00850 Histone deacetylase domain L1871_14015 PF07690 Major Facilitator Superfamily L1871_14020 PF01926 50S ribosome-binding GTPase L1871_14025 PF00245 Alkaline phosphatase L1871_14030 PF00245 Alkaline phosphatase L1871_14045 PF01272 Transcription elongation factor, GreA/GreB, C-term L1871_14045 PF14760 Rnk N-terminus L1871_14050 PF08448 PAS fold L1871_14050 PF00990 Diguanylate cyclase, GGDEF domain L1871_14055 PF00497 Bacterial extracellular solute-binding proteins, family 3 L1871_14060 PF00528 Binding-protein-dependent transport system inner membrane component L1871_14065 PF00005 ABC transporter L1871_14070 PF04116 Fatty acid hydroxylase superfamily L1871_14075 PF13520 Amino acid permease L1871_14080 PF02607 B12 binding domain L1871_14080 PF02574 Homocysteine S-methyltransferase L1871_14080 PF02965 Vitamin B12 dependent methionine synthase, activation domain L1871_14080 PF00809 Pterin binding enzyme L1871_14080 PF02310 B12 binding domain L1871_14090 PF01595 Cyclin M transmembrane N-terminal domain L1871_14090 PF03471 Transporter associated domain L1871_14090 PF00571 CBS domain L1871_14095 PF01895 PhoU domain L1871_14100 PF00005 ABC transporter L1871_14105 PF00528 Binding-protein-dependent transport system inner membrane component L1871_14110 PF00528 Binding-protein-dependent transport system inner membrane component L1871_14115 PF14437 MafB19-like deaminase L1871_14130 PF01274 Malate synthase L1871_14135 PF00463 Isocitrate lyase family L1871_14140 PF00308 Bacterial dnaA protein L1871_14155 PF00586 AIR synthase related protein, N-terminal domain L1871_14155 PF02769 AIR synthase related protein, C-terminal domain L1871_14160 PF00551 Formyl transferase L1871_14165 PF01784 NIF3 (NGG1p interacting factor 3) L1871_14170 PF02954 Bacterial regulatory protein, Fis family L1871_14170 PF00072 Response regulator receiver domain L1871_14170 PF00158 Sigma-54 interaction domain L1871_14175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_14175 PF00512 His Kinase A (phospho-acceptor) domain L1871_14175 PF13188 PAS domain L1871_14180 PF00158 Sigma-54 interaction domain L1871_14180 PF06490 Flagellar regulatory protein FleQ L1871_14180 PF02954 Bacterial regulatory protein, Fis family L1871_14190 PF01842 ACT domain L1871_14195 PF02503 Polyphosphate kinase middle domain L1871_14195 PF13090 Polyphosphate kinase C-terminal domain 2 L1871_14195 PF17941 Polyphosphate kinase C-terminal domain 1 L1871_14195 PF13089 Polyphosphate kinase N-terminal domain L1871_14200 PF02541 Ppx/GppA phosphatase family L1871_14205 PF03448 MgtE intracellular N domain L1871_14205 PF00571 CBS domain L1871_14205 PF01769 Divalent cation transporter L1871_14215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L1871_14215 PF07196 Flagellin hook IN motif L1871_14220 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase L1871_14220 PF10135 Rod binding protein L1871_14225 PF02119 Flagellar P-ring protein L1871_14230 PF02107 Flagellar L-ring protein L1871_14235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L1871_14235 PF00460 Flagella basal body rod protein L1871_14240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L1871_14240 PF00460 Flagella basal body rod protein L1871_14245 PF00460 Flagella basal body rod protein L1871_14245 PF07559 Flagellar basal body protein FlaE L1871_14245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L1871_14255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L1871_14255 PF00460 Flagella basal body rod protein L1871_14260 PF00460 Flagella basal body rod protein L1871_14265 PF01739 CheR methyltransferase, SAM binding domain L1871_14265 PF03705 CheR methyltransferase, all-alpha domain L1871_14270 PF01584 CheW-like domain L1871_14270 PF00072 Response regulator receiver domain L1871_14275 PF13144 Chaperone for flagella basal body P-ring formation L1871_14290 PF12850 Calcineurin-like phosphoesterase superfamily domain L1871_14295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L1871_14305 PF00849 RNA pseudouridylate synthase L1871_14305 PF01479 S4 domain L1871_14310 PF01966 HD domain L1871_14320 PF00892 EamA-like transporter family L1871_14325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L1871_14350 PF00313 'Cold-shock' DNA-binding domain L1871_14355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L1871_14355 PF02817 e3 binding domain L1871_14355 PF00364 Biotin-requiring enzyme L1871_14360 PF02780 Transketolase, C-terminal domain L1871_14360 PF02779 Transketolase, pyrimidine binding domain L1871_14365 PF00676 Dehydrogenase E1 component L1871_14370 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family L1871_14380 PF05472 DNA replication terminus site-binding protein (Ter protein) L1871_14385 PF00271 Helicase conserved C-terminal domain L1871_14385 PF00176 SNF2 family N-terminal domain L1871_14385 PF04434 SWIM zinc finger L1871_14390 PF04337 Protein of unknown function, DUF480 L1871_14400 PF02706 Chain length determinant protein L1871_14405 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain L1871_14405 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain L1871_14405 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain L1871_14410 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase L1871_14420 PF04321 RmlD substrate binding domain L1871_14425 PF02397 Bacterial sugar transferase L1871_14430 PF00535 Glycosyl transferase family 2 L1871_14440 PF13439 Glycosyltransferase Family 4 L1871_14440 PF00534 Glycosyl transferases group 1 L1871_14465 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family L1871_14470 PF02911 Formyl transferase, C-terminal domain L1871_14470 PF00551 Formyl transferase L1871_14475 PF00483 Nucleotidyl transferase L1871_14480 PF16363 GDP-mannose 4,6 dehydratase L1871_14485 PF00072 Response regulator receiver domain L1871_14485 PF00486 Transcriptional regulatory protein, C terminal L1871_14490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_14495 PF02685 Glucokinase L1871_14500 PF01380 SIS domain L1871_14500 PF01418 Helix-turn-helix domain, rpiR family L1871_14505 PF00224 Pyruvate kinase, barrel domain L1871_14505 PF02887 Pyruvate kinase, alpha/beta domain L1871_14520 PF00873 AcrB/AcrD/AcrF family L1871_14525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L1871_14525 PF09317 Domain of unknown function (DUF1974) L1871_14525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L1871_14525 PF02770 Acyl-CoA dehydrogenase, middle domain L1871_14530 PF00440 Bacterial regulatory proteins, tetR family L1871_14580 PF13476 AAA domain L1871_14600 PF02586 SOS response associated peptidase (SRAP) L1871_14605 PF00717 Peptidase S24-like L1871_14610 PF11798 IMS family HHH motif L1871_14610 PF00817 impB/mucB/samB family L1871_14610 PF13438 Domain of unknown function (DUF4113) L1871_14610 PF11799 impB/mucB/samB family C-terminal domain L1871_14665 PF01609 Transposase DDE domain L1871_14665 PF05598 Transposase domain (DUF772) L1871_14670 PF00589 Phage integrase family L1871_14685 PF02321 Outer membrane efflux protein L1871_14690 PF00873 AcrB/AcrD/AcrF family L1871_14695 PF00529 HlyD membrane-fusion protein of T1SS L1871_14695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1871_14700 PF08361 MAATS-type transcriptional repressor, C-terminal region L1871_14700 PF00440 Bacterial regulatory proteins, tetR family L1871_14725 PF00849 RNA pseudouridylate synthase L1871_14725 PF01479 S4 domain L1871_14730 PF04079 Segregation and condensation complex subunit ScpB L1871_14735 PF02616 Segregation and condensation protein ScpA L1871_14740 PF01300 Telomere recombination L1871_14745 PF02811 PHP domain L1871_14750 PF04715 Anthranilate synthase component I, N terminal region L1871_14750 PF00425 chorismate binding enzyme L1871_14755 PF00117 Glutamine amidotransferase class-I L1871_14755 PF02885 Glycosyl transferase family, helical bundle domain L1871_14755 PF00591 Glycosyl transferase family, a/b domain L1871_14760 PF00591 Glycosyl transferase family, a/b domain L1871_14760 PF02885 Glycosyl transferase family, helical bundle domain L1871_14765 PF00218 Indole-3-glycerol phosphate synthase L1871_14765 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase L1871_14770 PF00291 Pyridoxal-phosphate dependent enzyme L1871_14775 PF00290 Tryptophan synthase alpha chain L1871_14820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_14820 PF03466 LysR substrate binding domain L1871_14830 PF04069 Substrate binding domain of ABC-type glycine betaine transport system L1871_14835 PF00005 ABC transporter L1871_14840 PF00528 Binding-protein-dependent transport system inner membrane component L1871_14845 PF02668 Taurine catabolism dioxygenase TauD, TfdA family L1871_14850 PF07237 Protein of unknown function (DUF1428) L1871_14855 PF07690 Major Facilitator Superfamily L1871_14860 PF01040 UbiA prenyltransferase family L1871_14865 PF03626 Prokaryotic Cytochrome C oxidase subunit IV L1871_14870 PF00510 Cytochrome c oxidase subunit III L1871_14875 PF00115 Cytochrome C and Quinol oxidase polypeptide I L1871_14880 PF00116 Cytochrome C oxidase subunit II, periplasmic domain L1871_14880 PF06481 COX Aromatic Rich Motif L1871_14885 PF02627 Carboxymuconolactone decarboxylase family L1871_14890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_14890 PF03466 LysR substrate binding domain L1871_14900 PF01156 Inosine-uridine preferring nucleoside hydrolase L1871_14910 PF01047 MarR family L1871_14925 PF00127 Copper binding proteins, plastocyanin/azurin family L1871_14930 PF02424 ApbE family L1871_14935 PF00011 Hsp20/alpha crystallin family L1871_14940 PF00072 Response regulator receiver domain L1871_14950 PF03372 Endonuclease/Exonuclease/phosphatase family L1871_14960 PF00529 HlyD membrane-fusion protein of T1SS L1871_14960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1871_14965 PF00873 AcrB/AcrD/AcrF family L1871_14980 PF10437 Bacterial lipoate protein ligase C-terminus L1871_14980 PF03099 Biotin/lipoate A/B protein ligase family L1871_14985 PF00563 EAL domain L1871_14985 PF00990 Diguanylate cyclase, GGDEF domain L1871_14985 PF03707 Bacterial signalling protein N terminal repeat L1871_14990 PF00873 AcrB/AcrD/AcrF family L1871_15005 PF04143 Sulphur transport L1871_15020 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1871_15030 PF02308 MgtC family L1871_15035 PF13407 Periplasmic binding protein domain L1871_15035 PF00356 Bacterial regulatory proteins, lacI family L1871_15040 PF08244 Glycosyl hydrolases family 32 C terminal L1871_15040 PF00251 Glycosyl hydrolases family 32 N-terminal domain L1871_15045 PF02378 Phosphotransferase system, EIIC L1871_15045 PF00367 phosphotransferase system, EIIB L1871_15050 PF00294 pfkB family carbohydrate kinase L1871_15055 PF02264 LamB porin L1871_15055 PF11471 Maltoporin periplasmic N-terminal extension L1871_15060 PF01556 DnaJ C terminal domain L1871_15060 PF00684 DnaJ central domain L1871_15060 PF00226 DnaJ domain L1871_15065 PF00012 Hsp70 protein L1871_15070 PF13006 Insertion element 4 transposase N-terminal L1871_15070 PF01609 Transposase DDE domain L1871_15075 PF01025 GrpE L1871_15080 PF01513 ATP-NAD kinase L1871_15085 PF17158 Membrane-associated sensor, integral membrane domain L1871_15085 PF00990 Diguanylate cyclase, GGDEF domain L1871_15090 PF02463 RecF/RecN/SMC N terminal domain L1871_15100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1871_15105 PF12704 MacB-like periplasmic core domain L1871_15105 PF00005 ABC transporter L1871_15105 PF02687 FtsX-like permease family L1871_15110 PF02321 Outer membrane efflux protein L1871_15115 PF08021 Siderophore-interacting FAD-binding domain L1871_15115 PF04954 Siderophore-interacting protein L1871_15135 PF00816 H-NS histone family L1871_15140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_15140 PF03466 LysR substrate binding domain L1871_15145 PF00291 Pyridoxal-phosphate dependent enzyme L1871_15155 PF00180 Isocitrate/isopropylmalate dehydrogenase L1871_15190 PF00583 Acetyltransferase (GNAT) family L1871_15195 PF00849 RNA pseudouridylate synthase L1871_15200 PF00293 NUDIX domain L1871_15210 PF04356 Protein of unknown function (DUF489) L1871_15215 PF00206 Lyase L1871_15215 PF08328 Adenylosuccinate lyase C-terminal L1871_15220 PF08007 Cupin superfamily protein L1871_15225 PF02887 Pyruvate kinase, alpha/beta domain L1871_15225 PF00224 Pyruvate kinase, barrel domain L1871_15230 PF12794 Mechanosensitive ion channel inner membrane domain 1 L1871_15230 PF12795 Mechanosensitive ion channel porin domain L1871_15230 PF00924 Mechanosensitive ion channel L1871_15235 PF01810 LysE type translocator L1871_15240 PF10282 Lactonase, 7-bladed beta-propeller L1871_15250 PF01609 Transposase DDE domain L1871_15250 PF13006 Insertion element 4 transposase N-terminal L1871_15255 PF00860 Permease family L1871_15265 PF03949 Malic enzyme, NAD binding domain L1871_15265 PF00390 Malic enzyme, N-terminal domain L1871_15270 PF12804 MobA-like NTP transferase domain L1871_15275 PF03205 Molybdopterin guanine dinucleotide synthesis protein B L1871_15280 PF04632 Fusaric acid resistance protein family L1871_15295 PF08447 PAS fold L1871_15295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_15295 PF13426 PAS domain L1871_15315 PF05114 Protein of unknown function (DUF692) L1871_15325 PF02028 BCCT, betaine/carnitine/choline family transporter L1871_15360 PF13474 SnoaL-like domain L1871_15365 PF00291 Pyridoxal-phosphate dependent enzyme L1871_15365 PF14821 Threonine synthase N terminus L1871_15370 PF08544 GHMP kinases C terminal L1871_15370 PF00288 GHMP kinases N terminal domain L1871_15375 PF00696 Amino acid kinase family L1871_15375 PF00742 Homoserine dehydrogenase L1871_15375 PF13840 ACT domain L1871_15375 PF01842 ACT domain L1871_15375 PF03447 Homoserine dehydrogenase, NAD binding domain L1871_15380 PF00588 SpoU rRNA Methylase family L1871_15385 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) L1871_15400 PF03737 Aldolase/RraA L1871_15410 PF00072 Response regulator receiver domain L1871_15410 PF00486 Transcriptional regulatory protein, C terminal L1871_15425 PF00664 ABC transporter transmembrane region L1871_15425 PF00005 ABC transporter L1871_15430 PF00005 ABC transporter L1871_15430 PF00664 ABC transporter transmembrane region L1871_15450 PF18389 TrmO C-terminal domain L1871_15450 PF01980 tRNA-methyltransferase O L1871_15455 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal L1871_15455 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III L1871_15465 PF17862 AAA+ lid domain L1871_15465 PF00004 ATPase family associated with various cellular activities (AAA) L1871_15465 PF01434 Peptidase family M41 L1871_15465 PF06480 FtsH Extracellular L1871_15470 PF00291 Pyridoxal-phosphate dependent enzyme L1871_15475 PF00381 PTS HPr component phosphorylation site L1871_15480 PF00391 PEP-utilising enzyme, mobile domain L1871_15480 PF02896 PEP-utilising enzyme, TIM barrel domain L1871_15480 PF05524 PEP-utilising enzyme, N-terminal L1871_15485 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L1871_15490 PF01292 Prokaryotic cytochrome b561 L1871_15495 PF13006 Insertion element 4 transposase N-terminal L1871_15495 PF01609 Transposase DDE domain L1871_15505 PF12320 Type 5 capsule protein repressor C-terminal domain L1871_15505 PF00149 Calcineurin-like phosphoesterase L1871_15510 PF00583 Acetyltransferase (GNAT) family L1871_15515 PF04381 Putative exonuclease, RdgC L1871_15530 PF02254 TrkA-N domain L1871_15530 PF00999 Sodium/hydrogen exchanger family L1871_15535 PF02954 Bacterial regulatory protein, Fis family L1871_15535 PF00072 Response regulator receiver domain L1871_15535 PF00158 Sigma-54 interaction domain L1871_15565 PF01266 FAD dependent oxidoreductase L1871_15570 PF07883 Cupin domain L1871_15570 PF01381 Helix-turn-helix L1871_15575 PF00171 Aldehyde dehydrogenase family L1871_15580 PF00202 Aminotransferase class-III L1871_15590 PF00324 Amino acid permease L1871_15595 PF13520 Amino acid permease L1871_15605 PF02690 Na+/Pi-cotransporter L1871_15610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L1871_15610 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase L1871_15615 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase L1871_15620 PF01627 Hpt domain L1871_15620 PF00072 Response regulator receiver domain L1871_15620 PF00497 Bacterial extracellular solute-binding proteins, family 3 L1871_15620 PF00512 His Kinase A (phospho-acceptor) domain L1871_15620 PF00989 PAS fold L1871_15620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_15625 PF10725 Protein of unknown function (DUF2517) L1871_15645 PF00512 His Kinase A (phospho-acceptor) domain L1871_15645 PF00072 Response regulator receiver domain L1871_15645 PF09308 LuxQ, periplasmic L1871_15645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_15655 PF03734 L,D-transpeptidase catalytic domain L1871_15655 PF17969 L,D-transpeptidase C-terminal domain L1871_15655 PF01476 LysM domain L1871_15665 PF01575 MaoC like domain L1871_15670 PF05971 RNA methyltransferase L1871_15675 PF00877 NlpC/P60 family L1871_15680 PF01648 4'-phosphopantetheinyl transferase superfamily L1871_15685 PF00085 Thioredoxin L1871_15695 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase L1871_15700 PF01842 ACT domain L1871_15700 PF00551 Formyl transferase L1871_15710 PF13091 PLD-like domain L1871_15710 PF13396 Phospholipase_D-nuclease N-terminal L1871_15725 PF01464 Transglycosylase SLT domain L1871_15725 PF10145 Phage-related minor tail protein L1871_15725 PF01551 Peptidase family M23 L1871_15735 PF02075 Crossover junction endodeoxyribonuclease RuvC L1871_15740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L1871_15785 PF11842 Domain of unknown function (DUF3362) L1871_15785 PF04055 Radical SAM superfamily L1871_15785 PF08497 Radical SAM N-terminal L1871_15790 PF00873 AcrB/AcrD/AcrF family L1871_15805 PF00990 Diguanylate cyclase, GGDEF domain L1871_15805 PF17158 Membrane-associated sensor, integral membrane domain L1871_15810 PF01734 Patatin-like phospholipase L1871_15815 PF00209 Sodium:neurotransmitter symporter family L1871_15830 PF00691 OmpA family L1871_15830 PF01389 OmpA-like transmembrane domain L1871_15835 PF00691 OmpA family L1871_15835 PF01389 OmpA-like transmembrane domain L1871_15860 PF00691 OmpA family L1871_15860 PF01389 OmpA-like transmembrane domain L1871_15865 PF00390 Malic enzyme, N-terminal domain L1871_15865 PF03949 Malic enzyme, NAD binding domain L1871_15870 PF12833 Helix-turn-helix domain L1871_15875 PF01554 MatE L1871_15880 PF10692 Protein of unknown function (DUF2498) L1871_15885 PF00072 Response regulator receiver domain L1871_15885 PF00990 Diguanylate cyclase, GGDEF domain L1871_15900 PF01235 Sodium:alanine symporter family L1871_15905 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain L1871_15905 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain L1871_15910 PF01699 Sodium/calcium exchanger protein L1871_15915 PF08534 Redoxin L1871_15920 PF00293 NUDIX domain L1871_15930 PF00005 ABC transporter L1871_15935 PF00528 Binding-protein-dependent transport system inner membrane component L1871_15940 PF00528 Binding-protein-dependent transport system inner membrane component L1871_15945 PF00497 Bacterial extracellular solute-binding proteins, family 3 L1871_15960 PF00005 ABC transporter L1871_15965 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase L1871_15965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L1871_15970 PF03932 CutC family L1871_15975 PF00480 ROK family L1871_15985 PF01435 Peptidase family M48 L1871_15990 PF12849 PBP superfamily domain L1871_15995 PF11808 Phosphate regulon sensor protein PhoR L1871_15995 PF00512 His Kinase A (phospho-acceptor) domain L1871_15995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_15995 PF00989 PAS fold L1871_16000 PF00072 Response regulator receiver domain L1871_16000 PF00486 Transcriptional regulatory protein, C terminal L1871_16005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L1871_16010 PF07694 5TMR of 5TMR-LYT L1871_16010 PF00990 Diguanylate cyclase, GGDEF domain L1871_16015 PF02954 Bacterial regulatory protein, Fis family L1871_16015 PF01590 GAF domain L1871_16015 PF00158 Sigma-54 interaction domain L1871_16020 PF00171 Aldehyde dehydrogenase family L1871_16030 PF00892 EamA-like transporter family L1871_16040 PF00248 Aldo/keto reductase family L1871_16050 PF12431 Transcriptional regulator L1871_16050 PF00072 Response regulator receiver domain L1871_16055 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain L1871_16055 PF17203 Single cache domain 3 L1871_16055 PF00989 PAS fold L1871_16055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_16060 PF01047 MarR family L1871_16065 PF00529 HlyD membrane-fusion protein of T1SS L1871_16065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1871_16085 PF01679 Proteolipid membrane potential modulator L1871_16095 PF13597 Anaerobic ribonucleoside-triphosphate reductase L1871_16095 PF03477 ATP cone domain L1871_16115 PF01653 NAD-dependent DNA ligase adenylation domain L1871_16115 PF00533 BRCA1 C Terminus (BRCT) domain L1871_16115 PF12826 Helix-hairpin-helix motif L1871_16115 PF03119 NAD-dependent DNA ligase C4 zinc finger domain L1871_16115 PF03120 NAD-dependent DNA ligase OB-fold domain L1871_16120 PF04354 ZipA, C-terminal FtsZ-binding domain L1871_16125 PF02463 RecF/RecN/SMC N terminal domain L1871_16125 PF06470 SMC proteins Flexible Hinge Domain L1871_16135 PF03458 UPF0126 domain L1871_16145 PF05951 Bacterial protein of unknown function (DUF882) L1871_16150 PF03734 L,D-transpeptidase catalytic domain L1871_16150 PF01471 Putative peptidoglycan binding domain L1871_16165 PF00535 Glycosyl transferase family 2 L1871_16180 PF00128 Alpha amylase, catalytic domain L1871_16190 PF00072 Response regulator receiver domain L1871_16190 PF00196 Bacterial regulatory proteins, luxR family L1871_16210 PF00999 Sodium/hydrogen exchanger family L1871_16210 PF02080 TrkA-C domain L1871_16210 PF02254 TrkA-N domain L1871_16215 PF00990 Diguanylate cyclase, GGDEF domain L1871_16220 PF01171 PP-loop family L1871_16220 PF09179 TilS substrate binding domain L1871_16220 PF11734 TilS substrate C-terminal domain L1871_16225 PF01431 Peptidase family M13 L1871_16225 PF05649 Peptidase family M13 L1871_16235 PF00005 ABC transporter L1871_16235 PF16326 ABC transporter C-terminal domain L1871_16235 PF12848 ABC transporter L1871_16245 PF13520 Amino acid permease L1871_16255 PF03466 LysR substrate binding domain L1871_16255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_16270 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit L1871_16275 PF02811 PHP domain L1871_16275 PF01336 OB-fold nucleic acid binding domain L1871_16275 PF14579 Helix-hairpin-helix motif L1871_16275 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L1871_16275 PF07733 Bacterial DNA polymerase III alpha NTPase domain L1871_16280 PF01351 Ribonuclease HII L1871_16285 PF02684 Lipid-A-disaccharide synthetase L1871_16290 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 L1871_16290 PF00132 Bacterial transferase hexapeptide (six repeats) L1871_16295 PF07977 FabA-like domain L1871_16300 PF00132 Bacterial transferase hexapeptide (six repeats) L1871_16300 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD L1871_16305 PF03938 Outer membrane protein (OmpH-like) L1871_16310 PF01103 Surface antigen L1871_16310 PF07244 Surface antigen variable number repeat L1871_16315 PF17820 PDZ domain L1871_16315 PF02163 Peptidase family M50 L1871_16320 PF13288 DXP reductoisomerase C-terminal domain L1871_16320 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain L1871_16320 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase L1871_16330 PF01255 Putative undecaprenyl diphosphate synthase L1871_16335 PF01765 Ribosome recycling factor L1871_16340 PF00696 Amino acid kinase family L1871_16345 PF00889 Elongation factor TS L1871_16350 PF00318 Ribosomal protein S2 L1871_16355 PF00557 Metallopeptidase family M24 L1871_16360 PF01842 ACT domain L1871_16360 PF08335 GlnD PII-uridylyltransferase L1871_16360 PF01966 HD domain L1871_16360 PF01909 Nucleotidyltransferase domain L1871_16365 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal L1871_16365 PF00132 Bacterial transferase hexapeptide (six repeats) L1871_16365 PF14602 Hexapeptide repeat of succinyl-transferase L1871_16370 PF11944 Protein of unknown function (DUF3461) L1871_16375 PF00367 phosphotransferase system, EIIB L1871_16375 PF02378 Phosphotransferase system, EIIC L1871_16380 PF01609 Transposase DDE domain L1871_16380 PF13006 Insertion element 4 transposase N-terminal L1871_16385 PF07148 Maltose operon periplasmic protein precursor (MalM) L1871_16390 PF02264 LamB porin L1871_16395 PF00258 Flavodoxin L1871_16400 PF00849 RNA pseudouridylate synthase L1871_16405 PF04287 tRNA pseudouridine synthase C L1871_16430 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) L1871_16435 PF07348 Syd protein (SUKH-2) L1871_16440 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term L1871_16440 PF14489 QueF-like protein L1871_16450 PF00990 Diguanylate cyclase, GGDEF domain L1871_16455 PF11892 Domain of unknown function (DUF3412) L1871_16455 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases L1871_16455 PF03641 Possible lysine decarboxylase L1871_16460 PF01367 5'-3' exonuclease, C-terminal SAM fold L1871_16460 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L1871_16465 PF00180 Isocitrate/isopropylmalate dehydrogenase L1871_16465 PF18324 Hypothetical protein TT1725 L1871_16475 PF18125 RlmM ferredoxin-like domain L1871_16475 PF01728 FtsJ-like methyltransferase L1871_16490 PF03466 LysR substrate binding domain L1871_16490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_16495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_16495 PF00672 HAMP domain L1871_16500 PF00817 impB/mucB/samB family L1871_16500 PF11799 impB/mucB/samB family C-terminal domain L1871_16500 PF11798 IMS family HHH motif L1871_16515 PF02424 ApbE family L1871_16520 PF00970 Oxidoreductase FAD-binding domain L1871_16520 PF00111 2Fe-2S iron-sulfur cluster binding domain L1871_16520 PF00175 Oxidoreductase NAD-binding domain L1871_16525 PF02508 Rnf-Nqr subunit, membrane protein L1871_16530 PF02508 Rnf-Nqr subunit, membrane protein L1871_16535 PF04205 FMN-binding domain L1871_16540 PF03116 NQR2, RnfD, RnfE family L1871_16545 PF11973 NQRA C-terminal domain L1871_16545 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) L1871_16550 PF01722 BolA-like protein L1871_16555 PF05175 Methyltransferase small domain L1871_16565 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD L1871_16575 PF07690 Major Facilitator Superfamily L1871_16580 PF03502 Nucleoside-specific channel-forming protein, Tsx L1871_16585 PF04461 Protein of unknown function (DUF520) L1871_16590 PF02558 Ketopantoate reductase PanE/ApbA L1871_16590 PF08546 Ketopantoate reductase PanE/ApbA C terminal L1871_16595 PF01965 DJ-1/PfpI family L1871_16620 PF13503 Domain of unknown function (DUF4123) L1871_16625 PF04717 Type VI secretion system, phage-baseplate injector L1871_16635 PF05638 Type VI secretion system effector, Hcp L1871_16640 PF00196 Bacterial regulatory proteins, luxR family L1871_16640 PF03472 Autoinducer binding domain L1871_16645 PF01740 STAS domain L1871_16645 PF00916 Sulfate permease family L1871_16650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_16650 PF00512 His Kinase A (phospho-acceptor) domain L1871_16650 PF00672 HAMP domain L1871_16655 PF00072 Response regulator receiver domain L1871_16655 PF00486 Transcriptional regulatory protein, C terminal L1871_16660 PF00529 HlyD membrane-fusion protein of T1SS L1871_16660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1871_16665 PF00873 AcrB/AcrD/AcrF family L1871_16680 PF13006 Insertion element 4 transposase N-terminal L1871_16680 PF01609 Transposase DDE domain L1871_16685 PF16363 GDP-mannose 4,6 dehydratase L1871_16690 PF00970 Oxidoreductase FAD-binding domain L1871_16690 PF00042 Globin L1871_16690 PF00175 Oxidoreductase NAD-binding domain L1871_16695 PF03063 Prismane/CO dehydrogenase family L1871_16700 PF00210 Ferritin-like domain L1871_16740 PF00106 short chain dehydrogenase L1871_16750 PF03441 FAD binding domain of DNA photolyase L1871_16750 PF00875 DNA photolyase L1871_16755 PF13411 MerR HTH family regulatory protein L1871_16760 PF08349 Protein of unknown function (DUF1722) L1871_16785 PF01817 Chorismate mutase type II L1871_16785 PF00800 Prephenate dehydratase L1871_16815 PF09588 YqaJ-like viral recombinase domain L1871_16825 PF02796 Helix-turn-helix domain of resolvase L1871_16825 PF00239 Resolvase, N terminal domain L1871_16830 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ L1871_16835 PF00990 Diguanylate cyclase, GGDEF domain L1871_16835 PF03707 Bacterial signalling protein N terminal repeat L1871_16835 PF00563 EAL domain L1871_16840 PF13407 Periplasmic binding protein domain L1871_16865 PF00239 Resolvase, N terminal domain L1871_16865 PF02796 Helix-turn-helix domain of resolvase L1871_16890 PF00239 Resolvase, N terminal domain L1871_16890 PF02796 Helix-turn-helix domain of resolvase L1871_16925 PF04002 RadC-like JAB domain L1871_16950 PF00005 ABC transporter L1871_16960 PF00483 Nucleotidyl transferase L1871_17015 PF02463 RecF/RecN/SMC N terminal domain L1871_17045 PF00717 Peptidase S24-like L1871_17050 PF11798 IMS family HHH motif L1871_17050 PF11799 impB/mucB/samB family C-terminal domain L1871_17050 PF00817 impB/mucB/samB family L1871_17050 PF13438 Domain of unknown function (DUF4113) L1871_17055 PF13784 Fic/DOC family N-terminal L1871_17055 PF02661 Fic/DOC family L1871_17090 PF03976 Polyphosphate kinase 2 (PPK2) L1871_17100 PF08220 DeoR-like helix-turn-helix domain L1871_17100 PF00455 DeoR C terminal sensor domain L1871_17105 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase L1871_17105 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase L1871_17110 PF17042 Nucleotide-binding C-terminal domain L1871_17110 PF07005 Sugar-binding N-terminal domain L1871_17115 PF00596 Class II Aldolase and Adducin N-terminal domain L1871_17120 PF01261 Xylose isomerase-like TIM barrel L1871_17125 PF01370 NAD dependent epimerase/dehydratase family L1871_17130 PF02447 GntP family permease L1871_17140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_17145 PF03573 outer membrane porin, OprD family L1871_17150 PF00106 short chain dehydrogenase L1871_17175 PF02074 Carboxypeptidase Taq (M32) metallopeptidase L1871_17180 PF12833 Helix-turn-helix domain L1871_17180 PF00730 HhH-GPD superfamily base excision DNA repair protein L1871_17180 PF06029 AlkA N-terminal domain L1871_17180 PF02805 Metal binding domain of Ada L1871_17185 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain L1871_17185 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain L1871_17195 PF06906 Protein of unknown function (DUF1272) L1871_17205 PF12392 Collagenase L1871_17205 PF01136 Peptidase family U32 L1871_17210 PF01810 LysE type translocator L1871_17215 PF03466 LysR substrate binding domain L1871_17215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_17220 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal L1871_17220 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III L1871_17245 PF01590 GAF domain L1871_17245 PF00563 EAL domain L1871_17245 PF00990 Diguanylate cyclase, GGDEF domain L1871_17245 PF00989 PAS fold L1871_17255 PF04879 Molybdopterin oxidoreductase Fe4S4 domain L1871_17255 PF00384 Molybdopterin oxidoreductase L1871_17255 PF01568 Molydopterin dinucleotide binding domain L1871_17260 PF03916 Polysulphide reductase, NrfD L1871_17265 PF13247 4Fe-4S dicluster domain L1871_17270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_17270 PF00512 His Kinase A (phospho-acceptor) domain L1871_17270 PF00989 PAS fold L1871_17275 PF00072 Response regulator receiver domain L1871_17275 PF00196 Bacterial regulatory proteins, luxR family L1871_17280 PF03575 Peptidase family S51 L1871_17285 PF07690 Major Facilitator Superfamily L1871_17290 PF00529 HlyD membrane-fusion protein of T1SS L1871_17290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1871_17300 PF00206 Lyase L1871_17300 PF10415 Fumarase C C-terminus L1871_17310 PF14850 DNA-binding domain of Proline dehydrogenase L1871_17310 PF18327 Proline utilization A proline dehydrogenase N-terminal domain L1871_17310 PF01619 Proline dehydrogenase L1871_17310 PF00171 Aldehyde dehydrogenase family L1871_17315 PF00842 Alanine racemase, C-terminal domain L1871_17315 PF01168 Alanine racemase, N-terminal domain L1871_17320 PF00772 DnaB-like helicase N terminal domain L1871_17320 PF03796 DnaB-like helicase C terminal domain L1871_17330 PF02872 5'-nucleotidase, C-terminal domain L1871_17330 PF00149 Calcineurin-like phosphoesterase L1871_17350 PF00072 Response regulator receiver domain L1871_17350 PF02954 Bacterial regulatory protein, Fis family L1871_17350 PF00158 Sigma-54 interaction domain L1871_17355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L1871_17355 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase L1871_17365 PF04102 SlyX L1871_17370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L1871_17375 PF09526 Probable metal-binding protein (DUF2387) L1871_17385 PF00072 Response regulator receiver domain L1871_17385 PF01584 CheW-like domain L1871_17390 PF00561 alpha/beta hydrolase fold L1871_17395 PF00360 Phytochrome region L1871_17395 PF00990 Diguanylate cyclase, GGDEF domain L1871_17395 PF01590 GAF domain L1871_17395 PF00563 EAL domain L1871_17400 PF06794 Uncharacterised protein family (UPF0270) L1871_17405 PF00485 Phosphoribulokinase / Uridine kinase family L1871_17420 PF02566 OsmC-like protein L1871_17425 PF00027 Cyclic nucleotide-binding domain L1871_17425 PF13545 Crp-like helix-turn-helix domain L1871_17430 PF13847 Methyltransferase domain L1871_17435 PF00704 Glycosyl hydrolases family 18 L1871_17435 PF08329 Chitinase A, N-terminal domain L1871_17440 PF00989 PAS fold L1871_17440 PF00512 His Kinase A (phospho-acceptor) domain L1871_17440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_17445 PF12832 MFS_1 like family L1871_17450 PF00593 TonB dependent receptor L1871_17450 PF07715 TonB-dependent Receptor Plug Domain L1871_17470 PF01243 Pyridoxamine 5'-phosphate oxidase L1871_17475 PF06228 Haem utilisation ChuX/HutX L1871_17485 PF01032 FecCD transport family L1871_17490 PF00005 ABC transporter L1871_17500 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain L1871_17500 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain L1871_17500 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain L1871_17505 PF01370 NAD dependent epimerase/dehydratase family L1871_17510 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase L1871_17520 PF00535 Glycosyl transferase family 2 L1871_17525 PF01464 Transglycosylase SLT domain L1871_17535 PF07484 Phage Tail Collar Domain L1871_17540 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) L1871_17545 PF04865 Baseplate J-like protein L1871_17585 PF17482 Phage tail sheath C-terminal domain L1871_17585 PF04984 Phage tail sheath protein subtilisin-like domain L1871_17625 PF01343 Peptidase family S49 L1871_17640 PF03354 Phage Terminase L1871_17690 PF00717 Peptidase S24-like L1871_17875 PF00436 Single-strand binding protein family L1871_17885 PF00589 Phage integrase family L1871_17885 PF12167 Arm DNA-binding domain L1871_17890 PF12848 ABC transporter L1871_17890 PF00005 ABC transporter L1871_17900 PF00860 Permease family L1871_17905 PF00226 DnaJ domain L1871_17905 PF05099 Tellurite resistance protein TerB L1871_17910 PF00483 Nucleotidyl transferase L1871_17915 PF01636 Phosphotransferase enzyme family L1871_17920 PF03968 OstA-like protein L1871_17920 PF04453 LPS transport system D L1871_17925 PF09312 SurA N-terminal domain L1871_17925 PF00639 PPIC-type PPIASE domain L1871_17930 PF04166 Pyridoxal phosphate biosynthetic protein PdxA L1871_17935 PF00398 Ribosomal RNA adenine dimethylase L1871_17940 PF04379 ApaG domain L1871_17945 PF00149 Calcineurin-like phosphoesterase L1871_17950 PF01609 Transposase DDE domain L1871_17950 PF13006 Insertion element 4 transposase N-terminal L1871_17960 PF00296 Luciferase-like monooxygenase L1871_17970 PF07670 Nucleoside recognition L1871_17975 PF01926 50S ribosome-binding GTPase L1871_17975 PF01018 GTP1/OBG L1871_17980 PF01016 Ribosomal L27 protein L1871_17985 PF00829 Ribosomal prokaryotic L21 protein L1871_17990 PF00348 Polyprenyl synthetase L1871_17995 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) L1871_18000 PF01145 SPFH domain / Band 7 family L1871_18005 PF01145 SPFH domain / Band 7 family L1871_18005 PF12221 Bacterial membrane protein N terminal L1871_18010 PF01926 50S ribosome-binding GTPase L1871_18010 PF13167 GTP-binding GTPase N-terminal L1871_18010 PF16360 GTP-binding GTPase Middle Region L1871_18015 PF17209 Hfq protein L1871_18025 PF01119 DNA mismatch repair protein, C-terminal domain L1871_18025 PF08676 MutL C terminal dimerisation domain L1871_18030 PF01520 N-acetylmuramoyl-L-alanine amidase L1871_18035 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE L1871_18040 PF03853 YjeF-related protein N-terminus L1871_18040 PF01256 Carbohydrate kinase L1871_18045 PF08331 Domain of unknown function (DUF1730) L1871_18050 PF00480 ROK family L1871_18060 PF00005 ABC transporter L1871_18060 PF09383 NIL domain L1871_18065 PF00528 Binding-protein-dependent transport system inner membrane component L1871_18070 PF03180 NLPA lipoprotein L1871_18080 PF02357 Transcription termination factor nusG L1871_18085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_18090 PF00563 EAL domain L1871_18090 PF03707 Bacterial signalling protein N terminal repeat L1871_18090 PF00990 Diguanylate cyclase, GGDEF domain L1871_18095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_18095 PF00512 His Kinase A (phospho-acceptor) domain L1871_18095 PF09456 RcsC Alpha-Beta-Loop (ABL) L1871_18095 PF00072 Response regulator receiver domain L1871_18105 PF01966 HD domain L1871_18110 PF00989 PAS fold L1871_18110 PF00072 Response regulator receiver domain L1871_18110 PF01627 Hpt domain L1871_18110 PF00512 His Kinase A (phospho-acceptor) domain L1871_18110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_18110 PF18415 Histidine kinase receptor ArcB trans-membrane domain L1871_18130 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) L1871_18135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_18135 PF03466 LysR substrate binding domain L1871_18145 PF01259 SAICAR synthetase L1871_18150 PF06804 NlpB/DapX lipoprotein L1871_18155 PF00701 Dihydrodipicolinate synthetase family L1871_18160 PF01842 ACT domain L1871_18165 PF00578 AhpC/TSA family L1871_18170 PF03887 YfbU domain L1871_18175 PF04217 Protein of unknown function, DUF412 L1871_18180 PF00871 Acetokinase family L1871_18185 PF07085 DRTGG domain L1871_18185 PF01515 Phosphate acetyl/butaryl transferase L1871_18190 PF10369 Small subunit of acetolactate synthase L1871_18195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L1871_18195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L1871_18195 PF00205 Thiamine pyrophosphate enzyme, central domain L1871_18210 PF01569 PAP2 superfamily L1871_18220 PF00682 HMGL-like L1871_18220 PF08502 LeuA allosteric (dimerisation) domain L1871_18225 PF00180 Isocitrate/isopropylmalate dehydrogenase L1871_18230 PF00330 Aconitase family (aconitate hydratase) L1871_18235 PF00694 Aconitase C-terminal domain L1871_18255 PF00528 Binding-protein-dependent transport system inner membrane component L1871_18260 PF00005 ABC transporter L1871_18265 PF02562 PhoH-like protein L1871_18265 PF13638 PIN domain L1871_18275 PF02867 Ribonucleotide reductase, barrel domain L1871_18275 PF00317 Ribonucleotide reductase, all-alpha domain L1871_18275 PF08343 Ribonucleotide reductase N-terminal L1871_18310 PF03060 Nitronate monooxygenase L1871_18320 PF00445 Ribonuclease T2 family L1871_18340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_18340 PF16527 Two-component sensor protein CpxA, periplasmic domain L1871_18340 PF00512 His Kinase A (phospho-acceptor) domain L1871_18340 PF00672 HAMP domain L1871_18345 PF00486 Transcriptional regulatory protein, C terminal L1871_18345 PF00072 Response regulator receiver domain L1871_18350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1871_18355 PF02687 FtsX-like permease family L1871_18355 PF00005 ABC transporter L1871_18355 PF12704 MacB-like periplasmic core domain L1871_18365 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase L1871_18385 PF03783 Curli production assembly/transport component CsgG L1871_18395 PF05643 Putative bacterial lipoprotein (DUF799) L1871_18400 PF00990 Diguanylate cyclase, GGDEF domain L1871_18405 PF00270 DEAD/DEAH box helicase L1871_18405 PF00271 Helicase conserved C-terminal domain L1871_18415 PF02311 AraC-like ligand binding domain L1871_18415 PF12833 Helix-turn-helix domain L1871_18450 PF01609 Transposase DDE domain L1871_18450 PF05598 Transposase domain (DUF772) L1871_18460 PF03600 Citrate transporter L1871_18460 PF02080 TrkA-C domain L1871_18465 PF00009 Elongation factor Tu GTP binding domain L1871_18470 PF01507 Phosphoadenosine phosphosulfate reductase family L1871_18475 PF10414 Sirohaem synthase dimerisation region L1871_18475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L1871_18475 PF14824 Sirohaem biosynthesis protein central L1871_18480 PF01145 SPFH domain / Band 7 family L1871_18480 PF16200 C-terminal region of band_7 L1871_18485 PF01957 NfeD-like C-terminal, partner-binding L1871_18500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L1871_18500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L1871_18505 PF07690 Major Facilitator Superfamily L1871_18510 PF01725 Ham1 family L1871_18515 PF06969 HemN C-terminal domain L1871_18515 PF04055 Radical SAM superfamily L1871_18525 PF03889 Alternative ribosome-rescue factor A L1871_18535 PF13411 MerR HTH family regulatory protein L1871_18540 PF02142 MGS-like domain L1871_18540 PF01808 AICARFT/IMPCHase bienzyme L1871_18545 PF02843 Phosphoribosylglycinamide synthetase, C domain L1871_18545 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain L1871_18545 PF02844 Phosphoribosylglycinamide synthetase, N domain L1871_18560 PF00128 Alpha amylase, catalytic domain L1871_18575 PF04546 Sigma-70, non-essential region L1871_18575 PF03979 Sigma-70 factor, region 1.1 L1871_18575 PF00140 Sigma-70 factor, region 1.2 L1871_18575 PF04542 Sigma-70 region 2 L1871_18575 PF04539 Sigma-70 region 3 L1871_18575 PF04545 Sigma-70, region 4 L1871_18580 PF01807 CHC2 zinc finger L1871_18580 PF10410 DnaB-helicase binding domain of primase L1871_18580 PF08278 DNA primase DnaG DnaB-binding L1871_18580 PF08275 DNA primase catalytic core, N-terminal domain L1871_18585 PF09424 Yqey-like protein L1871_18590 PF01165 Ribosomal protein S21 L1871_18595 PF00814 Glycoprotease family L1871_18600 PF00140 Sigma-70 factor, region 1.2 L1871_18600 PF04542 Sigma-70 region 2 L1871_18600 PF04539 Sigma-70 region 3 L1871_18600 PF04545 Sigma-70, region 4 L1871_18605 PF01476 LysM domain L1871_18605 PF01551 Peptidase family M23 L1871_18610 PF09335 SNARE associated Golgi protein L1871_18620 PF01975 Survival protein SurE L1871_18625 PF01142 tRNA pseudouridine synthase D (TruD) L1871_18630 PF02542 YgbB family L1871_18635 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase L1871_18640 PF04977 Septum formation initiator L1871_18645 PF03952 Enolase, N-terminal domain L1871_18645 PF00113 Enolase, C-terminal TIM barrel domain L1871_18650 PF06418 CTP synthase N-terminus L1871_18650 PF00117 Glutamine amidotransferase class-I L1871_18655 PF03819 MazG nucleotide pyrophosphohydrolase domain L1871_18660 PF13291 ACT domain L1871_18660 PF04607 Region found in RelA / SpoT proteins L1871_18660 PF02824 TGS domain L1871_18665 PF01938 TRAM domain L1871_18665 PF05958 tRNA (Uracil-5-)-methyltransferase L1871_18670 PF00672 HAMP domain L1871_18670 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) L1871_18670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_18670 PF01627 Hpt domain L1871_18670 PF00512 His Kinase A (phospho-acceptor) domain L1871_18670 PF00072 Response regulator receiver domain L1871_18675 PF07308 Protein of unknown function (DUF1456) L1871_18680 PF01510 N-acetylmuramoyl-L-alanine amidase L1871_18685 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ L1871_18690 PF02565 Recombination protein O C terminal L1871_18690 PF11967 Recombination protein O N terminal L1871_18695 PF07650 KH domain L1871_18695 PF01926 50S ribosome-binding GTPase L1871_18700 PF14622 Ribonuclease-III-like L1871_18700 PF00035 Double-stranded RNA binding motif L1871_18705 PF10502 Signal peptidase, peptidase S26 L1871_18710 PF00679 Elongation factor G C-terminus L1871_18710 PF00009 Elongation factor Tu GTP binding domain L1871_18710 PF03144 Elongation factor Tu domain 2 L1871_18710 PF06421 GTP-binding protein LepA C-terminus L1871_18720 PF03888 MucB/RseB N-terminal domain L1871_18720 PF17188 MucB/RseB C-terminal domain L1871_18725 PF03873 Anti sigma-E protein RseA, C-terminal domain L1871_18725 PF03872 Anti sigma-E protein RseA, N-terminal domain L1871_18730 PF08281 Sigma-70, region 4 L1871_18730 PF04542 Sigma-70 region 2 L1871_18735 PF00890 FAD binding domain L1871_18735 PF02910 Fumarate reductase flavoprotein C-term L1871_18745 PF03937 Flavinator of succinate dehydrogenase L1871_18750 PF01571 Aminomethyltransferase folate-binding domain L1871_18755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_18755 PF03466 LysR substrate binding domain L1871_18770 PF03091 CutA1 divalent ion tolerance protein L1871_18775 PF02683 Cytochrome C biogenesis protein transmembrane region L1871_18775 PF11412 Disulphide bond corrector protein DsbC L1871_18785 PF01266 FAD dependent oxidoreductase L1871_18790 PF01116 Fructose-bisphosphate aldolase class-II L1871_18795 PF00162 Phosphoglycerate kinase L1871_18800 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain L1871_18800 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain L1871_18805 PF00480 ROK family L1871_18810 PF01208 Uroporphyrinogen decarboxylase (URO-D) L1871_18815 PF09297 NADH pyrophosphatase zinc ribbon domain L1871_18815 PF00293 NUDIX domain L1871_18820 PF08239 Bacterial SH3 domain L1871_18825 PF00520 Ion transport protein L1871_18825 PF00027 Cyclic nucleotide-binding domain L1871_18830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_18830 PF02743 Cache domain L1871_18830 PF00672 HAMP domain L1871_18835 PF01609 Transposase DDE domain L1871_18835 PF13006 Insertion element 4 transposase N-terminal L1871_18845 PF08335 GlnD PII-uridylyltransferase L1871_18845 PF03710 Glutamate-ammonia ligase adenylyltransferase L1871_18855 PF13006 Insertion element 4 transposase N-terminal L1871_18855 PF01609 Transposase DDE domain L1871_18865 PF00326 Prolyl oligopeptidase family L1871_18865 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain L1871_18870 PF00291 Pyridoxal-phosphate dependent enzyme L1871_18875 PF00528 Binding-protein-dependent transport system inner membrane component L1871_18880 PF00528 Binding-protein-dependent transport system inner membrane component L1871_18885 PF00005 ABC transporter L1871_18890 PF00497 Bacterial extracellular solute-binding proteins, family 3 L1871_18895 PF13194 Domain of unknown function (DUF4010) L1871_18900 PF14602 Hexapeptide repeat of succinyl-transferase L1871_18900 PF12464 Maltose acetyltransferase L1871_18930 PF14552 Tautomerase enzyme L1871_18940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_18940 PF03466 LysR substrate binding domain L1871_18945 PF14698 Argininosuccinate lyase C-terminal L1871_18945 PF00206 Lyase L1871_18950 PF00764 Arginosuccinate synthase L1871_18955 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain L1871_18955 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain L1871_18960 PF00696 Amino acid kinase family L1871_18965 PF01118 Semialdehyde dehydrogenase, NAD binding domain L1871_18965 PF02774 Semialdehyde dehydrogenase, dimerisation domain L1871_18970 PF01546 Peptidase family M20/M25/M40 L1871_18970 PF07687 Peptidase dimerisation domain L1871_18975 PF00311 Phosphoenolpyruvate carboxylase L1871_18980 PF00563 EAL domain L1871_18980 PF00990 Diguanylate cyclase, GGDEF domain L1871_18980 PF03707 Bacterial signalling protein N terminal repeat L1871_18985 PF00990 Diguanylate cyclase, GGDEF domain L1871_18990 PF04073 Aminoacyl-tRNA editing domain L1871_19010 PF00155 Aminotransferase class I and II L1871_19010 PF00392 Bacterial regulatory proteins, gntR family L1871_19025 PF03466 LysR substrate binding domain L1871_19025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_19030 PF03788 LrgA family L1871_19035 PF04172 LrgB-like family L1871_19040 PF03447 Homoserine dehydrogenase, NAD binding domain L1871_19040 PF00696 Amino acid kinase family L1871_19040 PF00742 Homoserine dehydrogenase L1871_19045 PF01053 Cys/Met metabolism PLP-dependent enzyme L1871_19050 PF01340 Met Apo-repressor, MetJ L1871_19060 PF01588 Putative tRNA binding domain L1871_19065 PF03222 Tryptophan/tyrosine permease family L1871_19070 PF00459 Inositol monophosphatase family L1871_19075 PF00293 NUDIX domain L1871_19080 PF13419 Haloacid dehalogenase-like hydrolase L1871_19085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family L1871_19090 PF03466 LysR substrate binding domain L1871_19090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_19095 PF00579 tRNA synthetases class I (W and Y) L1871_19095 PF01479 S4 domain L1871_19100 PF00196 Bacterial regulatory proteins, luxR family L1871_19105 PF01203 Type II secretion system (T2SS), protein N L1871_19110 PF04612 Type II secretion system (T2SS), protein M L1871_19115 PF05134 Type II secretion system (T2SS), protein L L1871_19115 PF12693 GspL periplasmic domain L1871_19120 PF03934 Type II secretion system (T2SS), protein K L1871_19130 PF07963 Prokaryotic N-terminal methylation motif L1871_19130 PF11612 Type II secretion system (T2SS), protein J L1871_19135 PF07963 Prokaryotic N-terminal methylation motif L1871_19135 PF02501 Type II secretion system (T2SS), protein I L1871_19140 PF07963 Prokaryotic N-terminal methylation motif L1871_19140 PF12019 Type II transport protein GspH L1871_19145 PF07963 Prokaryotic N-terminal methylation motif L1871_19145 PF08334 Type II secretion system (T2SS), protein G L1871_19150 PF00482 Type II secretion system (T2SS), protein F L1871_19155 PF00437 Type II/IV secretion system protein L1871_19160 PF03958 Bacterial type II/III secretion system short domain L1871_19160 PF00263 Bacterial type II and III secretion system protein L1871_19165 PF11356 Type II secretion system protein C L1871_19170 PF01479 S4 domain L1871_19175 PF01430 Hsp33 protein L1871_19180 PF01293 Phosphoenolpyruvate carboxykinase L1871_19185 PF00392 Bacterial regulatory proteins, gntR family L1871_19190 PF01321 Creatinase/Prolidase N-terminal domain L1871_19190 PF00557 Metallopeptidase family M24 L1871_19195 PF00583 Acetyltransferase (GNAT) family L1871_19200 PF05433 Glycine zipper 2TM domain L1871_19205 PF01928 CYTH domain L1871_19210 PF01865 Protein of unknown function DUF47 L1871_19215 PF01384 Phosphate transporter family L1871_19220 PF01743 Poly A polymerase head domain L1871_19220 PF12627 Probable RNA and SrmB- binding site of polymerase A L1871_19220 PF01966 HD domain L1871_19225 PF13401 AAA domain L1871_19225 PF01471 Putative peptidoglycan binding domain L1871_19230 PF16537 Type II secretion system protein B L1871_19235 PF14815 NUDIX domain L1871_19235 PF00730 HhH-GPD superfamily base excision DNA repair protein L1871_19235 PF00633 Helix-hairpin-helix motif L1871_19235 PF10576 Iron-sulfur binding domain of endonuclease III L1871_19240 PF04362 Bacterial Fe(2+) trafficking L1871_19245 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain L1871_19245 PF01464 Transglycosylase SLT domain L1871_19255 PF00657 GDSL-like Lipase/Acylhydrolase L1871_19260 PF00691 OmpA family L1871_19260 PF01389 OmpA-like transmembrane domain L1871_19265 PF03886 ABC-type transport auxiliary lipoprotein component L1871_19270 PF02470 MlaD protein L1871_19275 PF04403 Paraquat-inducible protein A L1871_19280 PF17209 Hfq protein L1871_19285 PF13419 Haloacid dehalogenase-like hydrolase L1871_19290 PF01590 GAF domain L1871_19290 PF00990 Diguanylate cyclase, GGDEF domain L1871_19290 PF00360 Phytochrome region L1871_19290 PF00563 EAL domain L1871_19295 PF00701 Dihydrodipicolinate synthetase family L1871_19300 PF05175 Methyltransferase small domain L1871_19300 PF08468 Methyltransferase small domain N-terminal L1871_19305 PF00483 Nucleotidyl transferase L1871_19310 PF08323 Starch synthase catalytic domain L1871_19310 PF00534 Glycosyl transferases group 1 L1871_19345 PF03553 Na+/H+ antiporter family L1871_19350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_19350 PF03466 LysR substrate binding domain L1871_19355 PF13416 Bacterial extracellular solute-binding protein L1871_19360 PF08402 TOBE domain L1871_19360 PF00005 ABC transporter L1871_19365 PF00528 Binding-protein-dependent transport system inner membrane component L1871_19370 PF00528 Binding-protein-dependent transport system inner membrane component L1871_19375 PF00171 Aldehyde dehydrogenase family L1871_19380 PF01040 UbiA prenyltransferase family L1871_19405 PF00510 Cytochrome c oxidase subunit III L1871_19410 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 L1871_19415 PF00115 Cytochrome C and Quinol oxidase polypeptide I L1871_19420 PF00116 Cytochrome C oxidase subunit II, periplasmic domain L1871_19420 PF02790 Cytochrome C oxidase subunit II, transmembrane domain L1871_19425 PF17176 tRNA-binding domain L1871_19425 PF05127 Helicase L1871_19425 PF08351 Domain of unknown function (DUF1726) L1871_19425 PF13718 GNAT acetyltransferase 2 L1871_19435 PF04324 BFD-like [2Fe-2S] binding domain L1871_19440 PF00210 Ferritin-like domain L1871_19445 PF02142 MGS-like domain L1871_19460 PF00710 Asparaginase, N-terminal L1871_19460 PF17763 Glutaminase/Asparaginase C-terminal domain L1871_19470 PF00356 Bacterial regulatory proteins, lacI family L1871_19475 PF02013 Cellulose or protein binding domain L1871_19475 PF00150 Cellulase (glycosyl hydrolase family 5) L1871_19480 PF03422 Carbohydrate binding module (family 6) L1871_19480 PF16990 Carbohydrate binding module (family 35) L1871_19480 PF13199 Glycosyl hydrolase family 66 L1871_19490 PF02264 LamB porin L1871_19495 PF00480 ROK family L1871_19500 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit L1871_19505 PF00232 Glycosyl hydrolase family 1 L1871_19510 PF02378 Phosphotransferase system, EIIC L1871_19515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L1871_19520 PF02378 Phosphotransferase system, EIIC L1871_19525 PF01238 Phosphomannose isomerase type I L1871_19535 PF00356 Bacterial regulatory proteins, lacI family L1871_19540 PF02378 Phosphotransferase system, EIIC L1871_19540 PF00367 phosphotransferase system, EIIB L1871_19545 PF00128 Alpha amylase, catalytic domain L1871_19545 PF11941 Domain of unknown function (DUF3459) L1871_19550 PF14602 Hexapeptide repeat of succinyl-transferase L1871_19550 PF12464 Maltose acetyltransferase L1871_19555 PF01037 Lrp/AsnC ligand binding domain L1871_19560 PF00892 EamA-like transporter family L1871_19605 PF02660 Glycerol-3-phosphate acyltransferase L1871_19610 PF02152 Dihydroneopterin aldolase L1871_19615 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) L1871_19625 PF07690 Major Facilitator Superfamily L1871_19630 PF02492 CobW/HypB/UreG, nucleotide-binding domain L1871_19630 PF07683 Cobalamin synthesis protein cobW C-terminal domain L1871_19635 PF04030 D-arabinono-1,4-lactone oxidase L1871_19635 PF01565 FAD binding domain L1871_19640 PF01810 LysE type translocator L1871_19645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_19645 PF03466 LysR substrate binding domain L1871_19650 PF00563 EAL domain L1871_19650 PF12792 CSS motif domain associated with EAL L1871_19655 PF11791 Aconitate B N-terminal domain L1871_19655 PF00330 Aconitase family (aconitate hydratase) L1871_19655 PF06434 Aconitate hydratase 2 N-terminus L1871_19660 PF01734 Patatin-like phospholipase L1871_19665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_19665 PF00672 HAMP domain L1871_19665 PF12729 Four helix bundle sensory module for signal transduction L1871_19670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_19670 PF00672 HAMP domain L1871_19670 PF12729 Four helix bundle sensory module for signal transduction L1871_19685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L1871_19685 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1871_19690 PF02817 e3 binding domain L1871_19690 PF00364 Biotin-requiring enzyme L1871_19690 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L1871_19695 PF00456 Transketolase, thiamine diphosphate binding domain L1871_19695 PF17831 Pyruvate dehydrogenase E1 component middle domain L1871_19700 PF07729 FCD domain L1871_19700 PF00392 Bacterial regulatory proteins, gntR family L1871_19705 PF01510 N-acetylmuramoyl-L-alanine amidase L1871_19715 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain L1871_19715 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain L1871_19720 PF07963 Prokaryotic N-terminal methylation motif L1871_19725 PF00437 Type II/IV secretion system protein L1871_19725 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain L1871_19730 PF00482 Type II secretion system (T2SS), protein F L1871_19735 PF01478 Type IV leader peptidase family L1871_19735 PF06750 Bacterial Peptidase A24 N-terminal domain L1871_19740 PF01121 Dephospho-CoA kinase L1871_19745 PF07072 Cell division protein L1871_19750 PF03884 DNA gyrase inhibitor YacG L1871_19755 PF00293 NUDIX domain L1871_19765 PF02810 SEC-C motif L1871_19765 PF07517 SecA DEAD-like domain L1871_19765 PF01043 SecA preprotein cross-linking domain L1871_19765 PF07516 SecA Wing and Scaffold domain L1871_19775 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase L1871_19780 PF12327 FtsZ family, C-terminal domain L1871_19780 PF00091 Tubulin/FtsZ family, GTPase domain L1871_19785 PF02491 SHS2 domain inserted in FTSA L1871_19790 PF08478 POTRA domain, FtsQ-type L1871_19790 PF03799 Cell division protein FtsQ L1871_19795 PF01225 Mur ligase family, catalytic domain L1871_19795 PF08245 Mur ligase middle domain L1871_19795 PF02875 Mur ligase family, glutamate ligase domain L1871_19800 PF04101 Glycosyltransferase family 28 C-terminal domain L1871_19800 PF03033 Glycosyltransferase family 28 N-terminal domain L1871_19805 PF01098 Cell cycle protein L1871_19810 PF02875 Mur ligase family, glutamate ligase domain L1871_19810 PF08245 Mur ligase middle domain L1871_19815 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 L1871_19815 PF00953 Glycosyl transferase family 4 L1871_19820 PF01225 Mur ligase family, catalytic domain L1871_19820 PF02875 Mur ligase family, glutamate ligase domain L1871_19820 PF08245 Mur ligase middle domain L1871_19825 PF08245 Mur ligase middle domain L1871_19825 PF01225 Mur ligase family, catalytic domain L1871_19825 PF02875 Mur ligase family, glutamate ligase domain L1871_19830 PF03717 Penicillin-binding Protein dimerisation domain L1871_19830 PF00905 Penicillin binding protein transpeptidase domain L1871_19835 PF04999 Cell division protein FtsL L1871_19840 PF01795 MraW methylase family L1871_19845 PF02381 MraZ protein, putative antitoxin-like L1871_19855 PF01464 Transglycosylase SLT domain L1871_19855 PF01476 LysM domain L1871_19865 PF00691 OmpA family L1871_19865 PF13677 Membrane MotB of proton-channel complex MotA/MotB L1871_19870 PF01618 MotA/TolQ/ExbB proton channel family L1871_19875 PF04542 Sigma-70 region 2 L1871_19875 PF04545 Sigma-70, region 4 L1871_19895 PF02561 Flagellar protein FliS L1871_19900 PF02465 Flagellar hook-associated protein 2 N-terminus L1871_19900 PF07195 Flagellar hook-associated protein 2 C-terminus L1871_19900 PF07196 Flagellin hook IN motif L1871_19905 PF00669 Bacterial flagellin N-terminal helical region L1871_19905 PF00700 Bacterial flagellin C-terminal helical region L1871_19910 PF00700 Bacterial flagellin C-terminal helical region L1871_19910 PF00669 Bacterial flagellin N-terminal helical region L1871_19915 PF00669 Bacterial flagellin N-terminal helical region L1871_19915 PF00700 Bacterial flagellin C-terminal helical region L1871_19930 PF00669 Bacterial flagellin N-terminal helical region L1871_19935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L1871_19935 PF00460 Flagella basal body rod protein L1871_19945 PF02119 Flagellar P-ring protein L1871_19950 PF02107 Flagellar L-ring protein L1871_19955 PF00460 Flagella basal body rod protein L1871_19955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L1871_19960 PF00460 Flagella basal body rod protein L1871_19960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L1871_19965 PF07559 Flagellar basal body protein FlaE L1871_19965 PF00460 Flagella basal body rod protein L1871_19965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L1871_19970 PF03963 Flagellar hook capping protein - N-terminal region L1871_19970 PF13860 FlgD Ig-like domain L1871_19970 PF13861 FlgD Tudor-like domain L1871_19975 PF00460 Flagella basal body rod protein L1871_19975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L1871_19980 PF00460 Flagella basal body rod protein L1871_20005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L1871_20005 PF18269 T3SS EscN ATPase C-terminal domain L1871_20015 PF14841 FliG middle domain L1871_20015 PF14842 FliG N-terminal domain L1871_20015 PF01706 FliG C-terminal domain L1871_20020 PF01514 Secretory protein of YscJ/FliF family L1871_20020 PF08345 Flagellar M-ring protein C-terminal L1871_20025 PF02049 Flagellar hook-basal body complex protein FliE L1871_20030 PF00158 Sigma-54 interaction domain L1871_20030 PF00072 Response regulator receiver domain L1871_20030 PF02954 Bacterial regulatory protein, Fis family L1871_20035 PF00771 FHIPEP family L1871_20040 PF01312 FlhB HrpN YscU SpaS Family L1871_20045 PF01311 Bacterial export proteins, family 1 L1871_20050 PF01313 Bacterial export proteins, family 3 L1871_20055 PF00813 FliP family L1871_20060 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term L1871_20075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L1871_20080 PF04348 LppC putative lipoprotein L1871_20085 PF02021 Uncharacterised protein family UPF0102 L1871_20090 PF13580 SIS domain L1871_20095 PF04972 BON domain L1871_20100 PF04386 Stringent starvation protein B L1871_20105 PF00043 Glutathione S-transferase, C-terminal domain L1871_20105 PF02798 Glutathione S-transferase, N-terminal domain L1871_20110 PF02167 Cytochrome C1 family L1871_20115 PF00032 Cytochrome b(C-terminal)/b6/petD L1871_20115 PF00033 Cytochrome b/b6/petB L1871_20120 PF00355 Rieske [2Fe-2S] domain L1871_20120 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal L1871_20125 PF00380 Ribosomal protein S9/S16 L1871_20130 PF00572 Ribosomal protein L13 L1871_20135 PF03969 AFG1-like ATPase L1871_20145 PF13180 PDZ domain L1871_20145 PF00595 PDZ domain L1871_20150 PF13180 PDZ domain L1871_20180 PF01979 Amidohydrolase family L1871_20185 PF03841 L-seryl-tRNA selenium transferase L1871_20190 PF07071 KDGP aldolase L1871_20200 PF00381 PTS HPr component phosphorylation site L1871_20205 PF03668 P-loop ATPase protein family L1871_20210 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L1871_20215 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein L1871_20220 PF04552 Sigma-54, DNA binding domain L1871_20220 PF04963 Sigma-54 factor, core binding domain L1871_20220 PF00309 Sigma-54 factor, Activator interacting domain (AID) L1871_20225 PF00005 ABC transporter L1871_20225 PF12399 Branched-chain amino acid ATP-binding cassette transporter L1871_20230 PF03968 OstA-like protein L1871_20245 PF00571 CBS domain L1871_20245 PF01380 SIS domain L1871_20250 PF00005 ABC transporter L1871_20255 PF02405 Permease MlaE L1871_20260 PF02470 MlaD protein L1871_20265 PF05494 MlaC protein L1871_20275 PF01722 BolA-like protein L1871_20280 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L1871_20305 PF01523 Putative modulator of DNA gyrase L1871_20310 PF04751 Protein of unknown function (DUF615) L1871_20320 PF04363 Protein of unknown function (DUF496) L1871_20350 PF01381 Helix-turn-helix L1871_20350 PF07883 Cupin domain L1871_20355 PF03594 Benzoate membrane transport protein L1871_20365 PF02219 Methylenetetrahydrofolate reductase L1871_20380 PF12729 Four helix bundle sensory module for signal transduction L1871_20380 PF00672 HAMP domain L1871_20380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_20385 PF03922 OmpW family L1871_20390 PF00005 ABC transporter L1871_20390 PF17760 UvrA interaction domain L1871_20390 PF17755 UvrA DNA-binding domain L1871_20395 PF00196 Bacterial regulatory proteins, luxR family L1871_20400 PF00436 Single-strand binding protein family L1871_20415 PF00313 'Cold-shock' DNA-binding domain L1871_20420 PF00672 HAMP domain L1871_20420 PF00512 His Kinase A (phospho-acceptor) domain L1871_20420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_20425 PF00072 Response regulator receiver domain L1871_20425 PF00486 Transcriptional regulatory protein, C terminal L1871_20435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_20435 PF00672 HAMP domain L1871_20445 PF08448 PAS fold L1871_20445 PF00990 Diguanylate cyclase, GGDEF domain L1871_20450 PF00543 Nitrogen regulatory protein P-II L1871_20455 PF00909 Ammonium Transporter Family L1871_20465 PF13538 UvrD-like helicase C-terminal domain L1871_20470 PF13361 UvrD-like helicase C-terminal domain L1871_20470 PF00580 UvrD/REP helicase N-terminal domain L1871_20470 PF12705 PD-(D/E)XK nuclease superfamily L1871_20475 PF17946 RecC C-terminal domain L1871_20480 PF07681 DoxX L1871_20485 PF17954 Quercetinase C-terminal cupin domain L1871_20485 PF02678 Pirin L1871_20495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_20495 PF03466 LysR substrate binding domain L1871_20505 PF07702 UTRA domain L1871_20505 PF00392 Bacterial regulatory proteins, gntR family L1871_20520 PF00528 Binding-protein-dependent transport system inner membrane component L1871_20530 PF08402 TOBE domain L1871_20530 PF00005 ABC transporter L1871_20540 PF00990 Diguanylate cyclase, GGDEF domain L1871_20540 PF00072 Response regulator receiver domain L1871_20560 PF00583 Acetyltransferase (GNAT) family L1871_20565 PF00199 Catalase L1871_20565 PF06628 Catalase-related immune-responsive L1871_20585 PF00293 NUDIX domain L1871_20590 PF01594 AI-2E family transporter L1871_20600 PF03079 ARD/ARD' family L1871_20605 PF00860 Permease family L1871_20610 PF02733 Dak1 domain L1871_20615 PF02734 DAK2 domain L1871_20620 PF03610 PTS system fructose IIA component L1871_20620 PF05524 PEP-utilising enzyme, N-terminal L1871_20620 PF00391 PEP-utilising enzyme, mobile domain L1871_20620 PF00381 PTS HPr component phosphorylation site L1871_20625 PF00158 Sigma-54 interaction domain L1871_20625 PF00989 PAS fold L1871_20625 PF02954 Bacterial regulatory protein, Fis family L1871_20630 PF03466 LysR substrate binding domain L1871_20630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_20635 PF04371 Porphyromonas-type peptidyl-arginine deiminase L1871_20640 PF00795 Carbon-nitrogen hydrolase L1871_20645 PF13416 Bacterial extracellular solute-binding protein L1871_20650 PF04371 Porphyromonas-type peptidyl-arginine deiminase L1871_20690 PF03144 Elongation factor Tu domain 2 L1871_20690 PF00009 Elongation factor Tu GTP binding domain L1871_20690 PF03143 Elongation factor Tu C-terminal domain L1871_20695 PF03764 Elongation factor G, domain IV L1871_20695 PF14492 Elongation Factor G, domain II L1871_20695 PF00679 Elongation factor G C-terminus L1871_20695 PF03144 Elongation factor Tu domain 2 L1871_20695 PF00009 Elongation factor Tu GTP binding domain L1871_20700 PF00177 Ribosomal protein S7p/S5e L1871_20705 PF00164 Ribosomal protein S12/S23 L1871_20710 PF04077 DsrH like protein L1871_20715 PF02635 DsrE/DsrF-like family L1871_20720 PF02635 DsrE/DsrF-like family L1871_20725 PF01042 Endoribonuclease L-PSP L1871_20730 PF13309 HTH domain L1871_20730 PF08348 YheO-like PAS domain L1871_20735 PF04998 RNA polymerase Rpb1, domain 5 L1871_20735 PF05000 RNA polymerase Rpb1, domain 4 L1871_20735 PF00623 RNA polymerase Rpb1, domain 2 L1871_20735 PF04997 RNA polymerase Rpb1, domain 1 L1871_20735 PF04983 RNA polymerase Rpb1, domain 3 L1871_20740 PF04561 RNA polymerase Rpb2, domain 2 L1871_20740 PF04565 RNA polymerase Rpb2, domain 3 L1871_20740 PF10385 RNA polymerase beta subunit external 1 domain L1871_20740 PF00562 RNA polymerase Rpb2, domain 6 L1871_20740 PF04560 RNA polymerase Rpb2, domain 7 L1871_20740 PF04563 RNA polymerase beta subunit L1871_20745 PF00542 Ribosomal protein L7/L12 C-terminal domain L1871_20745 PF16320 Ribosomal protein L7/L12 dimerisation domain L1871_20750 PF00466 Ribosomal protein L10 L1871_20755 PF00687 Ribosomal protein L1p/L10e family L1871_20760 PF00298 Ribosomal protein L11, RNA binding domain L1871_20760 PF03946 Ribosomal protein L11, N-terminal domain L1871_20765 PF00467 KOW motif L1871_20765 PF02357 Transcription termination factor nusG L1871_20770 PF00584 SecE/Sec61-gamma subunits of protein translocation complex L1871_20780 PF00009 Elongation factor Tu GTP binding domain L1871_20780 PF03143 Elongation factor Tu C-terminal domain L1871_20780 PF03144 Elongation factor Tu domain 2 L1871_20795 PF00485 Phosphoribulokinase / Uridine kinase family L1871_20800 PF02237 Biotin protein ligase C terminal domain L1871_20800 PF03099 Biotin/lipoate A/B protein ligase family L1871_20800 PF08279 HTH domain L1871_20805 PF01565 FAD binding domain L1871_20805 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain L1871_20810 PF02254 TrkA-N domain L1871_20810 PF02080 TrkA-C domain L1871_20815 PF02386 Cation transport protein L1871_20820 PF01131 DNA topoisomerase L1871_20820 PF01751 Toprim domain L1871_20825 PF03264 NapC/NirT cytochrome c family, N-terminal region L1871_20830 PF01568 Molydopterin dinucleotide binding domain L1871_20830 PF18364 Molybdopterin oxidoreductase N-terminal domain L1871_20830 PF00384 Molybdopterin oxidoreductase L1871_20840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_20845 PF00072 Response regulator receiver domain L1871_20845 PF00486 Transcriptional regulatory protein, C terminal L1871_20860 PF01794 Ferric reductase like transmembrane component L1871_20865 PF00174 Oxidoreductase molybdopterin binding domain L1871_20870 PF06496 Protein of unknown function (DUF1097) L1871_20875 PF00072 Response regulator receiver domain L1871_20875 PF00158 Sigma-54 interaction domain L1871_20885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_20885 PF00512 His Kinase A (phospho-acceptor) domain L1871_20905 PF00571 CBS domain L1871_20905 PF00478 IMP dehydrogenase / GMP reductase domain L1871_20915 PF01037 Lrp/AsnC ligand binding domain L1871_20920 PF03590 Aspartate-ammonia ligase L1871_20935 PF10431 C-terminal, D2-small domain, of ClpB protein L1871_20935 PF02861 Clp amino terminal domain, pathogenicity island component L1871_20935 PF17871 AAA lid domain L1871_20935 PF00004 ATPase family associated with various cellular activities (AAA) L1871_20935 PF07724 AAA domain (Cdc48 subfamily) L1871_20940 PF02578 Multi-copper polyphenol oxidoreductase laccase L1871_20945 PF01479 S4 domain L1871_20945 PF00849 RNA pseudouridylate synthase L1871_20950 PF13525 Outer membrane lipoprotein L1871_20955 PF03313 Serine dehydratase alpha chain L1871_20960 PF13309 HTH domain L1871_20960 PF08348 YheO-like PAS domain L1871_20970 PF02233 NAD(P) transhydrogenase beta subunit L1871_20975 PF01262 Alanine dehydrogenase/PNT, C-terminal domain L1871_20975 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch L1871_20975 PF05222 Alanine dehydrogenase/PNT, N-terminal domain L1871_20980 PF00465 Iron-containing alcohol dehydrogenase L1871_20985 PF06719 AraC-type transcriptional regulator N-terminus L1871_20985 PF12833 Helix-turn-helix domain L1871_20990 PF08212 Lipocalin-like domain L1871_21000 PF00672 HAMP domain L1871_21000 PF02743 Cache domain L1871_21000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_21025 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain L1871_21025 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain L1871_21030 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain L1871_21030 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain L1871_21035 PF01316 Arginine repressor, DNA binding domain L1871_21035 PF02863 Arginine repressor, C-terminal domain L1871_21040 PF03606 C4-dicarboxylate anaerobic carrier L1871_21045 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain L1871_21045 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain L1871_21050 PF00696 Amino acid kinase family L1871_21080 PF00672 HAMP domain L1871_21080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_21080 PF02743 Cache domain L1871_21085 PF02653 Branched-chain amino acid transport system / permease component L1871_21090 PF00005 ABC transporter L1871_21095 PF13407 Periplasmic binding protein domain L1871_21100 PF02837 Glycosyl hydrolases family 2, sugar binding domain L1871_21100 PF00703 Glycosyl hydrolases family 2 L1871_21100 PF16353 Domain of unknown function(DUF4981) L1871_21100 PF02836 Glycosyl hydrolases family 2, TIM barrel domain L1871_21100 PF02929 Beta galactosidase small chain L1871_21105 PF00356 Bacterial regulatory proteins, lacI family L1871_21110 PF16363 GDP-mannose 4,6 dehydratase L1871_21115 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain L1871_21115 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain L1871_21120 PF10509 Galactokinase galactose-binding signature L1871_21120 PF08544 GHMP kinases C terminal L1871_21120 PF00288 GHMP kinases N terminal domain L1871_21125 PF01263 Aldose 1-epimerase L1871_21130 PF00248 Aldo/keto reductase family L1871_21135 PF02673 Bacitracin resistance protein BacA L1871_21140 PF12973 ChrR Cupin-like domain L1871_21145 PF04545 Sigma-70, region 4 L1871_21145 PF04542 Sigma-70 region 2 L1871_21155 PF00750 tRNA synthetases class I (R) L1871_21155 PF05746 DALR anticodon binding domain L1871_21155 PF03485 Arginyl tRNA synthetase N terminal domain L1871_21165 PF00227 Proteasome subunit L1871_21170 PF10431 C-terminal, D2-small domain, of ClpB protein L1871_21170 PF07724 AAA domain (Cdc48 subfamily) L1871_21170 PF00004 ATPase family associated with various cellular activities (AAA) L1871_21175 PF07690 Major Facilitator Superfamily L1871_21190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1871_21195 PF00005 ABC transporter L1871_21210 PF01077 Nitrite and sulphite reductase 4Fe-4S domain L1871_21210 PF04324 BFD-like [2Fe-2S] binding domain L1871_21210 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1871_21210 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain L1871_21210 PF18267 Rubredoxin NAD+ reductase C-terminal domain L1871_21215 PF13806 Rieske-like [2Fe-2S] domain L1871_21220 PF01226 Formate/nitrite transporter L1871_21225 PF10414 Sirohaem synthase dimerisation region L1871_21225 PF14824 Sirohaem biosynthesis protein central L1871_21225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L1871_21230 PF00571 CBS domain L1871_21230 PF01769 Divalent cation transporter L1871_21230 PF03448 MgtE intracellular N domain L1871_21235 PF03737 Aldolase/RraA L1871_21240 PF02592 Putative vitamin uptake transporter L1871_21250 PF02696 Uncharacterized ACR, YdiU/UPF0061 family L1871_21255 PF00034 Cytochrome c L1871_21260 PF00270 DEAD/DEAH box helicase L1871_21260 PF00570 HRDC domain L1871_21260 PF16124 RecQ zinc-binding L1871_21260 PF09382 RQC domain L1871_21260 PF00271 Helicase conserved C-terminal domain L1871_21265 PF03061 Thioesterase superfamily L1871_21280 PF03473 MOSC domain L1871_21280 PF03475 3-alpha domain L1871_21285 PF00528 Binding-protein-dependent transport system inner membrane component L1871_21290 PF00528 Binding-protein-dependent transport system inner membrane component L1871_21295 PF00005 ABC transporter L1871_21295 PF08402 TOBE domain L1871_21300 PF13416 Bacterial extracellular solute-binding protein L1871_21305 PF13416 Bacterial extracellular solute-binding protein L1871_21310 PF00202 Aminotransferase class-III L1871_21315 PF00120 Glutamine synthetase, catalytic domain L1871_21320 PF01258 Prokaryotic dksA/traR C4-type zinc finger L1871_21335 PF05981 CreA protein L1871_21340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L1871_21340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain L1871_21345 PF00012 Hsp70 protein L1871_21360 PF02903 Alpha amylase, N-terminal ig-like domain L1871_21360 PF00128 Alpha amylase, catalytic domain L1871_21370 PF09940 Domain of unknown function (DUF2172) L1871_21370 PF16254 Domain of unknown function (DUF4910) L1871_21370 PF16221 winged helix-turn-helix L1871_21400 PF05958 tRNA (Uracil-5-)-methyltransferase L1871_21405 PF00072 Response regulator receiver domain L1871_21405 PF00486 Transcriptional regulatory protein, C terminal L1871_21415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_21415 PF00672 HAMP domain L1871_21415 PF00512 His Kinase A (phospho-acceptor) domain L1871_21425 PF01609 Transposase DDE domain L1871_21425 PF13006 Insertion element 4 transposase N-terminal L1871_21430 PF00390 Malic enzyme, N-terminal domain L1871_21430 PF03949 Malic enzyme, NAD binding domain L1871_21435 PF11066 Protein of unknown function (DUF2867) L1871_21435 PF13460 NAD(P)H-binding L1871_21440 PF01197 Ribosomal protein L31 L1871_21445 PF00270 DEAD/DEAH box helicase L1871_21445 PF00271 Helicase conserved C-terminal domain L1871_21445 PF17764 3′ DNA-binding domain (3′BD) L1871_21445 PF18074 Primosomal protein N C-terminal domain L1871_21445 PF18319 PriA DNA helicase Cys-rich region (CRR) domain L1871_21450 PF00440 Bacterial regulatory proteins, tetR family L1871_21460 PF00691 OmpA family L1871_21460 PF01389 OmpA-like transmembrane domain L1871_21465 PF00585 C-terminal regulatory domain of Threonine dehydratase L1871_21465 PF00291 Pyridoxal-phosphate dependent enzyme L1871_21470 PF00920 Dehydratase family L1871_21475 PF01063 Amino-transferase class IV L1871_21485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L1871_21485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L1871_21485 PF00205 Thiamine pyrophosphate enzyme, central domain L1871_21490 PF01078 Magnesium chelatase, subunit ChlI L1871_21490 PF13335 Magnesium chelatase, subunit ChlI C-terminal L1871_21495 PF01553 Acyltransferase L1871_21500 PF01553 Acyltransferase L1871_21505 PF04463 Protein of unknown function (DUF523) L1871_21515 PF00857 Isochorismatase family L1871_21520 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family L1871_21520 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain L1871_21525 PF01323 DSBA-like thioredoxin domain L1871_21530 PF01636 Phosphotransferase enzyme family L1871_21535 PF13746 4Fe-4S dicluster domain L1871_21535 PF12801 4Fe-4S binding domain L1871_21535 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase L1871_21540 PF06288 Protein of unknown function (DUF1040) L1871_21545 PF00990 Diguanylate cyclase, GGDEF domain L1871_21545 PF00360 Phytochrome region L1871_21545 PF01590 GAF domain L1871_21545 PF00563 EAL domain L1871_21550 PF00376 MerR family regulatory protein L1871_21550 PF09278 MerR, DNA binding L1871_21555 PF00403 Heavy-metal-associated domain L1871_21560 PF00156 Phosphoribosyl transferase domain L1871_21565 PF01138 3' exoribonuclease family, domain 1 L1871_21565 PF03725 3' exoribonuclease family, domain 2 L1871_21570 PF08340 Domain of unknown function (DUF1732) L1871_21570 PF03755 YicC-like family, N-terminal region L1871_21575 PF13006 Insertion element 4 transposase N-terminal L1871_21575 PF01609 Transposase DDE domain L1871_21595 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) L1871_21600 PF01075 Glycosyltransferase family 9 (heptosyltransferase) L1871_21605 PF00535 Glycosyl transferase family 2 L1871_21610 PF01075 Glycosyltransferase family 9 (heptosyltransferase) L1871_21615 PF01467 Cytidylyltransferase-like L1871_21620 PF04393 Protein of unknown function (DUF535) L1871_21625 PF06827 Zinc finger found in FPG and IleRS L1871_21625 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain L1871_21625 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain L1871_21635 PF00471 Ribosomal protein L33 L1871_21640 PF00830 Ribosomal L28 family L1871_21645 PF04002 RadC-like JAB domain L1871_21650 PF04127 DNA / pantothenate metabolism flavoprotein L1871_21650 PF02441 Flavoprotein L1871_21655 PF00692 dUTPase L1871_21660 PF00440 Bacterial regulatory proteins, tetR family L1871_21665 PF00924 Mechanosensitive ion channel L1871_21665 PF05552 Conserved TM helix L1871_21675 PF00342 Phosphoglucose isomerase L1871_21680 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain L1871_21680 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain L1871_21685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_21685 PF03466 LysR substrate binding domain L1871_21695 PF13380 CoA binding domain L1871_21695 PF13607 Succinyl-CoA ligase like flavodoxin domain L1871_21695 PF00583 Acetyltransferase (GNAT) family L1871_21720 PF12724 Flavodoxin domain L1871_21725 PF02386 Cation transport protein L1871_21730 PF09186 Domain of unknown function (DUF1949) L1871_21730 PF01205 Uncharacterized protein family UPF0029 L1871_21735 PF00557 Metallopeptidase family M24 L1871_21740 PF00501 AMP-binding enzyme L1871_21740 PF13193 AMP-binding enzyme C-terminal domain L1871_21745 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain L1871_21745 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain L1871_21745 PF00378 Enoyl-CoA hydratase/isomerase L1871_21750 PF02803 Thiolase, C-terminal domain L1871_21750 PF00108 Thiolase, N-terminal domain L1871_21755 PF00072 Response regulator receiver domain L1871_21755 PF00486 Transcriptional regulatory protein, C terminal L1871_21760 PF00672 HAMP domain L1871_21760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_21760 PF00512 His Kinase A (phospho-acceptor) domain L1871_21765 PF01547 Bacterial extracellular solute-binding protein L1871_21785 PF01206 Sulfurtransferase TusA L1871_21790 PF01042 Endoribonuclease L-PSP L1871_21805 PF00691 OmpA family L1871_21805 PF13488 Glycine zipper L1871_21815 PF00857 Isochorismatase family L1871_21820 PF03352 Methyladenine glycosylase L1871_21825 PF02091 Glycyl-tRNA synthetase alpha subunit L1871_21830 PF05746 DALR anticodon binding domain L1871_21830 PF02092 Glycyl-tRNA synthetase beta subunit L1871_21835 PF01590 GAF domain L1871_21835 PF00990 Diguanylate cyclase, GGDEF domain L1871_21835 PF00360 Phytochrome region L1871_21835 PF00563 EAL domain L1871_21850 PF03222 Tryptophan/tyrosine permease family L1871_21855 PF03222 Tryptophan/tyrosine permease family L1871_21860 PF01212 Beta-eliminating lyase L1871_21870 PF12801 4Fe-4S binding domain L1871_21880 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1871_21880 PF18113 Rubredoxin binding C-terminal domain L1871_21885 PF00258 Flavodoxin L1871_21885 PF00753 Metallo-beta-lactamase superfamily L1871_21885 PF00301 Rubredoxin L1871_21890 PF01590 GAF domain L1871_21890 PF00158 Sigma-54 interaction domain L1871_21895 PF00356 Bacterial regulatory proteins, lacI family L1871_21900 PF13458 Periplasmic binding protein L1871_21905 PF02653 Branched-chain amino acid transport system / permease component L1871_21910 PF02653 Branched-chain amino acid transport system / permease component L1871_21910 PF11862 Domain of unknown function (DUF3382) L1871_21915 PF00005 ABC transporter L1871_21915 PF12399 Branched-chain amino acid ATP-binding cassette transporter L1871_21920 PF00005 ABC transporter L1871_21930 PF01810 LysE type translocator L1871_21935 PF00581 Rhodanese-like domain L1871_21940 PF01694 Rhomboid family L1871_21940 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease L1871_21945 PF12262 Bacterial virulence factor lipase N-terminal L1871_21950 PF04380 Membrane fusogenic activity L1871_21955 PF00175 Oxidoreductase NAD-binding domain L1871_21960 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase L1871_21970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L1871_21970 PF07498 Rho termination factor, N-terminal domain L1871_21970 PF07497 Rho termination factor, RNA-binding domain L1871_21975 PF00085 Thioredoxin L1871_21980 PF00270 DEAD/DEAH box helicase L1871_21980 PF00271 Helicase conserved C-terminal domain L1871_21985 PF02541 Ppx/GppA phosphatase family L1871_21995 PF04445 Putative SAM-dependent methyltransferase L1871_22000 PF03707 Bacterial signalling protein N terminal repeat L1871_22000 PF00990 Diguanylate cyclase, GGDEF domain L1871_22000 PF00563 EAL domain L1871_22005 PF01432 Peptidase family M3 L1871_22010 PF00490 Delta-aminolevulinic acid dehydratase L1871_22015 PF01026 TatD related DNase L1871_22020 PF00902 Sec-independent protein translocase protein (TatC) L1871_22025 PF02416 mttA/Hcf106 family L1871_22030 PF02416 mttA/Hcf106 family L1871_22035 PF03109 ABC1 family L1871_22040 PF02036 SCP-2 sterol transfer family L1871_22045 PF01209 ubiE/COQ5 methyltransferase family L1871_22050 PF02537 CrcB-like protein, Camphor Resistance (CrcB) L1871_22110 PF03544 Gram-negative bacterial TonB protein C-terminal L1871_22115 PF02472 Biopolymer transport protein ExbD/TolR L1871_22120 PF01618 MotA/TolQ/ExbB proton channel family L1871_22125 PF01618 MotA/TolQ/ExbB proton channel family L1871_22135 PF00196 Bacterial regulatory proteins, luxR family L1871_22135 PF03472 Autoinducer binding domain L1871_22140 PF01380 SIS domain L1871_22145 PF08220 DeoR-like helix-turn-helix domain L1871_22145 PF00455 DeoR C terminal sensor domain L1871_22150 PF00486 Transcriptional regulatory protein, C terminal L1871_22150 PF00072 Response regulator receiver domain L1871_22155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1871_22155 PF00512 His Kinase A (phospho-acceptor) domain L1871_22155 PF00672 HAMP domain L1871_22160 PF00905 Penicillin binding protein transpeptidase domain L1871_22165 PF06123 Inner membrane protein CreD L1871_22170 PF00132 Bacterial transferase hexapeptide (six repeats) L1871_22170 PF14602 Hexapeptide repeat of succinyl-transferase L1871_22170 PF12804 MobA-like NTP transferase domain L1871_22175 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain L1871_22175 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain L1871_22180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L1871_22180 PF02874 ATP synthase alpha/beta family, beta-barrel domain L1871_22185 PF00231 ATP synthase L1871_22190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L1871_22190 PF00306 ATP synthase alpha/beta chain, C terminal domain L1871_22190 PF02874 ATP synthase alpha/beta family, beta-barrel domain L1871_22195 PF00213 ATP synthase delta (OSCP) subunit L1871_22200 PF00430 ATP synthase B/B' CF(0) L1871_22205 PF00137 ATP synthase subunit C L1871_22210 PF00119 ATP synthase A chain L1871_22220 PF17762 HTH domain found in ParB protein L1871_22220 PF02195 ParB-like nuclease domain L1871_22225 PF13614 AAA domain L1871_22230 PF02527 rRNA small subunit methyltransferase G L1871_22235 PF01134 Glucose inhibited division protein A L1871_22235 PF13932 GidA associated domain L1871_22240 PF00258 Flavodoxin L1871_22245 PF07715 TonB-dependent Receptor Plug Domain L1871_22245 PF00593 TonB dependent receptor L1871_22250 PF00005 ABC transporter L1871_22255 PF00005 ABC transporter L1871_22260 PF01497 Periplasmic binding protein L1871_22265 PF01032 FecCD transport family L1871_22270 PF01926 50S ribosome-binding GTPase L1871_22270 PF12631 MnmE helical domain L1871_22270 PF10396 GTP-binding protein TrmE N-terminus L1871_22275 PF02096 60Kd inner membrane protein L1871_22275 PF14849 YidC periplasmic domain L1871_22280 PF01809 Putative membrane protein insertion efficiency factor L1871_22285 PF00825 Ribonuclease P L1871_22290 PF00468 Ribosomal protein L34 L1871_22295 PF00005 ABC transporter L1871_22300 PF00528 Binding-protein-dependent transport system inner membrane component L1871_22305 PF00497 Bacterial extracellular solute-binding proteins, family 3 L1871_22360 PF00186 Dihydrofolate reductase L1871_22365 PF00303 Thymidylate synthase L1871_22375 PF03477 ATP cone domain L1871_22375 PF02867 Ribonucleotide reductase, barrel domain L1871_22375 PF00317 Ribonucleotide reductase, all-alpha domain L1871_22405 PF13476 AAA domain L1871_22440 PF00589 Phage integrase family L1871_22440 PF13495 Phage integrase, N-terminal SAM-like domain L1871_22450 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L1871_22455 PF00893 Small Multidrug Resistance protein L1871_22465 PF00893 Small Multidrug Resistance protein L1871_22470 PF00809 Pterin binding enzyme L1871_22485 PF13610 DDE domain L1871_22530 PF00216 Bacterial DNA-binding protein L1871_22550 PF00154 recA bacterial DNA recombination protein L1871_22560 PF00476 DNA polymerase family A L1871_22560 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L1871_22560 PF01367 5'-3' exonuclease, C-terminal SAM fold L1871_22580 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L1871_22580 PF07733 Bacterial DNA polymerase III alpha NTPase domain L1871_22580 PF02811 PHP domain L1871_22580 PF14579 Helix-hairpin-helix motif L1871_22595 PF11775 Cobalamin biosynthesis protein CobT VWA domain L1871_22595 PF06213 Cobalamin biosynthesis protein CobT L1871_22610 PF13614 AAA domain L1871_22640 PF01807 CHC2 zinc finger L1871_22640 PF10410 DnaB-helicase binding domain of primase L1871_22640 PF08275 DNA primase catalytic core, N-terminal domain L1871_22655 PF17209 Hfq protein L1871_22685 PF08400 Prophage tail fibre N-terminal L1871_22685 PF07484 Phage Tail Collar Domain L1871_22685 PF03335 Phage tail fibre repeat L1871_22780 PF01695 IstB-like ATP binding protein L1871_22785 PF00665 Integrase core domain L1871_22825 PF00005 ABC transporter L1871_22845 PF17191 RecG wedge domain L1871_22845 PF00271 Helicase conserved C-terminal domain L1871_22845 PF00270 DEAD/DEAH box helicase L1871_22885 PF02899 Phage integrase, N-terminal SAM-like domain L1871_22885 PF00589 Phage integrase family L1871_22955 PF02583 Metal-sensitive transcriptional repressor L1871_22960 PF01545 Cation efflux family L1871_22965 PF01022 Bacterial regulatory protein, arsR family L1871_22970 PF00239 Resolvase, N terminal domain L1871_22970 PF02796 Helix-turn-helix domain of resolvase L1871_22975 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ L1871_22990 PF05598 Transposase domain (DUF772) L1871_22990 PF01609 Transposase DDE domain L1871_23015 PF07015 VirC1 protein L1871_23055 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH L1871_23060 PF01544 CorA-like Mg2+ transporter protein L1871_23070 PF13091 PLD-like domain L1871_23080 PF01625 Peptide methionine sulfoxide reductase L1871_23095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L1871_23095 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1871_23095 PF00403 Heavy-metal-associated domain L1871_23105 PF02696 Uncharacterized ACR, YdiU/UPF0061 family L1871_23120 PF01625 Peptide methionine sulfoxide reductase L1871_23125 PF01641 SelR domain L1871_23130 PF03466 LysR substrate binding domain L1871_23130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L1871_23140 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ L1871_23145 PF02796 Helix-turn-helix domain of resolvase L1871_23145 PF00239 Resolvase, N terminal domain L1871_23150 PF07669 Eco57I restriction-modification methylase L1871_23155 PF17728 BsuBI/PstI restriction endonuclease HTH domain L1871_23155 PF06616 BsuBI/PstI restriction endonuclease domain L1871_23165 PF13614 AAA domain L1871_23200 PF01641 SelR domain L1871_23205 PF02696 Uncharacterized ACR, YdiU/UPF0061 family L1871_23215 PF01625 Peptide methionine sulfoxide reductase L1871_23220 PF04221 RelB antitoxin L1871_23275 PF01526 Tn3 transposase DDE domain L1871_23275 PF13700 Domain of unknown function (DUF4158) L1871_23280 PF02796 Helix-turn-helix domain of resolvase L1871_23280 PF00239 Resolvase, N terminal domain L1871_23330 PF00239 Resolvase, N terminal domain L1871_23330 PF02796 Helix-turn-helix domain of resolvase L1871_23335 PF01526 Tn3 transposase DDE domain L1871_23335 PF13700 Domain of unknown function (DUF4158) L1871_23345 PF01695 IstB-like ATP binding protein L1871_23350 PF00665 Integrase core domain L1871_23360 PF13614 AAA domain L1871_23365 PF04221 RelB antitoxin L1871_23370 PF05016 ParE toxin of type II toxin-antitoxin system, parDE L1871_23395 PF08447 PAS fold L1871_23395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L1871_23495 PF05707 Zonular occludens toxin (Zot) L1871_23570 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin