C1C91_00040 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C1C91_00045 SM00448 cheY-homologous receiver domain C1C91_00045 SM00850 LytTr DNA-binding domain C1C91_00060 SM00487 DEAD-like helicases superfamily C1C91_00085 SM01321 C1C91_00085 C1C91_00105 SM00487 DEAD-like helicases superfamily C1C91_00105 SM00490 helicase superfamily c-terminal domain C1C91_00215 SM00900 C1C91_00215 C1C91_00225 SM00478 endonuclease III C1C91_00225 SM00525 C1C91_00225 C1C91_00385 SM00822 C1C91_00385 C1C91_00410 SM00858 C1C91_00410 C1C91_00495 SM00981 C1C91_00495 C1C91_00510 SM01359 C1C91_00510 C1C91_00510 SM01360 C1C91_00510 C1C91_00515 SM00450 Rhodanese Homology Domain C1C91_00520 SM00052 Putative diguanylate phosphodiesterase C1C91_00520 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C1C91_00520 SM00091 PAS domain C1C91_00520 SM00267 diguanylate cyclase C1C91_00545 SM00062 Bacterial periplasmic substrate-binding proteins C1C91_00545 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C1C91_00550 SM00382 ATPases associated with a variety of cellular activities C1C91_00625 SM00382 ATPases associated with a variety of cellular activities C1C91_00725 SM00420 helix_turn_helix, Deoxyribose operon repressor C1C91_00725 SM01134 C1C91_00725 C1C91_00840 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C1C91_00855 SM01321 C1C91_00855 C1C91_00875 SM00855 Phosphoglycerate mutase family C1C91_00880 SM00052 Putative diguanylate phosphodiesterase C1C91_00880 SM00267 diguanylate cyclase C1C91_00915 SM00563 Phosphate acyltransferases C1C91_00925 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C1C91_00935 SM00867 YceI-like domain C1C91_00955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_00955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_00965 SM00852 Probable molybdopterin binding domain C1C91_00980 SM00382 ATPases associated with a variety of cellular activities C1C91_01010 SM00852 Probable molybdopterin binding domain C1C91_01035 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C1C91_01050 SM00729 Elongator protein 3, MiaB family, Radical SAM C1C91_01060 SM00421 helix_turn_helix, Lux Regulon C1C91_01060 SM00448 cheY-homologous receiver domain C1C91_01070 SM00464 Found in ATP-dependent protease La (LON) C1C91_01075 SM00387 Histidine kinase-like ATPases C1C91_01075 SM00388 His Kinase A (phosphoacceptor) domain C1C91_01075 SM00448 cheY-homologous receiver domain C1C91_01080 SM00897 FIST N domain C1C91_01080 SM01204 C1C91_01080 C1C91_01110 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C1C91_01120 SM00479 C1C91_01120 C1C91_01180 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. C1C91_01200 SM00528 Domain in histone-like proteins of HNS family C1C91_01225 SM00530 Helix-turn-helix XRE-family like proteins C1C91_01250 SM00849 Metallo-beta-lactamase superfamily C1C91_01255 SM00257 Lysin motif C1C91_01280 SM00354 helix_turn _helix lactose operon repressor C1C91_01290 SM00052 Putative diguanylate phosphodiesterase C1C91_01290 SM00267 diguanylate cyclase C1C91_01370 SM00347 helix_turn_helix multiple antibiotic resistance protein C1C91_01425 SM01081 Putative carbohydrate binding domain C1C91_01575 SM00890 Domain of unknown function C1C91_01610 SM00729 Elongator protein 3, MiaB family, Radical SAM C1C91_01610 SM00876 Biotin and Thiamin Synthesis associated domain C1C91_01620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_01680 SM01091 Transporter associated domain C1C91_01695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_01695 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_01810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_01890 SM00528 Domain in histone-like proteins of HNS family C1C91_02045 SM00382 ATPases associated with a variety of cellular activities C1C91_02055 SM00260 Two component signalling adaptor domain C1C91_02060 SM00260 Two component signalling adaptor domain C1C91_02080 SM00448 cheY-homologous receiver domain C1C91_02085 SM00073 Histidine Phosphotransfer domain C1C91_02085 SM00260 Two component signalling adaptor domain C1C91_02085 SM00387 Histidine kinase-like ATPases C1C91_02085 SM01231 C1C91_02085 C1C91_02095 SM00448 cheY-homologous receiver domain C1C91_02110 SM00382 ATPases associated with a variety of cellular activities C1C91_02110 SM00962 SRP54-type protein, GTPase domain C1C91_02170 SM00382 ATPases associated with a variety of cellular activities C1C91_02215 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C1C91_02220 SM00729 Elongator protein 3, MiaB family, Radical SAM C1C91_02245 SM00382 ATPases associated with a variety of cellular activities C1C91_02265 SM00091 PAS domain C1C91_02265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_02275 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C1C91_02275 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C1C91_02275 SM00493 C1C91_02275 C1C91_02320 SM00788 Adenylosuccinate synthetase C1C91_02340 SM00363 S4 RNA-binding domain C1C91_02365 SM00861 Transketolase, pyrimidine binding domain C1C91_02375 SM00731 SprT homologues. C1C91_02400 SM00732 Likely ribonuclease with RNase H fold. C1C91_02450 SM00986 Uracil DNA glycosylase superfamily C1C91_02450 SM00987 UreE urease accessory protein, C-terminal domain C1C91_02485 SM00937 C1C91_02485 C1C91_02510 SM01400 C1C91_02510 C1C91_02570 SM01022 C1C91_02570 C1C91_02600 SM01150 C1C91_02600 C1C91_02665 SM00965 Secretin and TonB N terminus short domain C1C91_02685 SM00842 Cell division protein FtsA C1C91_02705 SM00849 Metallo-beta-lactamase superfamily C1C91_02745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_02745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_02800 SM01236 C1C91_02800 C1C91_02815 SM00448 cheY-homologous receiver domain C1C91_02815 SM00862 Transcriptional regulatory protein, C terminal C1C91_02820 SM00387 Histidine kinase-like ATPases C1C91_02820 SM00388 His Kinase A (phosphoacceptor) domain C1C91_02830 SM01240 C1C91_02830 C1C91_02840 SM00841 Elongation factor P, C-terminal C1C91_02840 SM01185 C1C91_02840 C1C91_02850 SM00382 ATPases associated with a variety of cellular activities C1C91_02930 SM00729 Elongator protein 3, MiaB family, Radical SAM C1C91_02945 SM00116 Domain in cystathionine beta-synthase and other proteins. C1C91_02945 SM01091 Transporter associated domain C1C91_03010 SM00936 Penicillin-binding protein 5, C-terminal domain C1C91_03030 SM00729 Elongator protein 3, MiaB family, Radical SAM C1C91_03055 SM00422 helix_turn_helix, mercury resistance C1C91_03155 SM00316 Ribosomal protein S1-like RNA-binding domain C1C91_03155 SM00322 K homology RNA-binding domain C1C91_03160 SM01387 C1C91_03160 C1C91_03180 SM00316 Ribosomal protein S1-like RNA-binding domain C1C91_03220 SM00382 ATPases associated with a variety of cellular activities C1C91_03230 SM01103 C1C91_03230 C1C91_03265 SM00861 Transketolase, pyrimidine binding domain C1C91_03285 SM00382 ATPases associated with a variety of cellular activities C1C91_03360 SM00052 Putative diguanylate phosphodiesterase C1C91_03360 SM00267 diguanylate cyclase C1C91_03380 SM00878 Biotin carboxylase C-terminal domain C1C91_03405 SM00829 Enoylreductase C1C91_03415 SM01266 C1C91_03415 C1C91_03420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_03445 SM01126 C1C91_03445 C1C91_03460 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1C91_03470 SM00870 C1C91_03470 C1C91_03535 SM00382 ATPases associated with a variety of cellular activities C1C91_03560 SM00852 Probable molybdopterin binding domain C1C91_03570 SM00477 DNA/RNA non-specific endonuclease C1C91_03570 SM00892 DNA/RNA non-specific endonuclease C1C91_03575 SM01057 Eukaryotic-type carbonic anhydrase C1C91_03600 SM00382 ATPases associated with a variety of cellular activities C1C91_03615 SM01012 C1C91_03615 C1C91_03625 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C1C91_03655 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase C1C91_03680 SM00487 DEAD-like helicases superfamily C1C91_03715 SM00382 ATPases associated with a variety of cellular activities C1C91_03720 SM00382 ATPases associated with a variety of cellular activities C1C91_03770 SM00028 Tetratricopeptide repeats C1C91_03830 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_03830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_03840 SM00357 Cold shock protein domain C1C91_03880 SM00479 C1C91_03880 C1C91_03915 SM00052 Putative diguanylate phosphodiesterase C1C91_03915 SM00091 PAS domain C1C91_03915 SM00267 diguanylate cyclase C1C91_03945 SM00382 ATPases associated with a variety of cellular activities C1C91_03985 SM00052 Putative diguanylate phosphodiesterase C1C91_04000 SM00382 ATPases associated with a variety of cellular activities C1C91_04010 SM00260 Two component signalling adaptor domain C1C91_04010 SM00448 cheY-homologous receiver domain C1C91_04025 SM01321 C1C91_04025 C1C91_04030 SM00116 Domain in cystathionine beta-synthase and other proteins. C1C91_04035 SM00382 ATPases associated with a variety of cellular activities C1C91_04090 SM00422 helix_turn_helix, mercury resistance C1C91_04175 SM00327 von Willebrand factor (vWF) type A domain C1C91_04240 SM00382 ATPases associated with a variety of cellular activities C1C91_04330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_04330 SM00387 Histidine kinase-like ATPases C1C91_04330 SM00388 His Kinase A (phosphoacceptor) domain C1C91_04335 SM00448 cheY-homologous receiver domain C1C91_04335 SM00862 Transcriptional regulatory protein, C terminal C1C91_04345 SM00382 ATPases associated with a variety of cellular activities C1C91_04390 SM00267 diguanylate cyclase C1C91_04395 SM00487 DEAD-like helicases superfamily C1C91_04395 SM00490 helicase superfamily c-terminal domain C1C91_04405 SM00342 helix_turn_helix, arabinose operon control protein C1C91_04455 SM00347 helix_turn_helix multiple antibiotic resistance protein C1C91_04475 SM00267 diguanylate cyclase C1C91_04480 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C1C91_04480 SM00267 diguanylate cyclase C1C91_04485 SM00327 von Willebrand factor (vWF) type A domain C1C91_04535 SM00345 helix_turn_helix gluconate operon transcriptional repressor C1C91_04585 SM00344 helix_turn_helix ASNC type C1C91_04600 SM00347 helix_turn_helix multiple antibiotic resistance protein C1C91_04605 SM00829 Enoylreductase C1C91_04620 SM00342 helix_turn_helix, arabinose operon control protein C1C91_04620 SM00871 Bacterial transcription activator, effector binding domain C1C91_04630 SM00642 Alpha-amylase domain C1C91_04635 SM00642 Alpha-amylase domain C1C91_04645 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1C91_04660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_04660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_04795 SM00382 ATPases associated with a variety of cellular activities C1C91_04800 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C1C91_04805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_04805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_04820 SM00822 C1C91_04820 C1C91_04860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_04865 SM00487 DEAD-like helicases superfamily C1C91_04865 SM00490 helicase superfamily c-terminal domain C1C91_04880 SM00642 Alpha-amylase domain C1C91_04900 SM00028 Tetratricopeptide repeats C1C91_05005 SM00382 ATPases associated with a variety of cellular activities C1C91_05055 SM00487 DEAD-like helicases superfamily C1C91_05055 SM00490 helicase superfamily c-terminal domain C1C91_05070 SM00052 Putative diguanylate phosphodiesterase C1C91_05070 SM00267 diguanylate cyclase C1C91_05085 SM00883 Chaperonin 10 Kd subunit C1C91_05195 SM00967 RNA 2'-O ribose methyltransferase substrate binding C1C91_05200 SM00316 Ribosomal protein S1-like RNA-binding domain C1C91_05200 SM00357 Cold shock protein domain C1C91_05200 SM00955 C1C91_05200 C1C91_05205 SM00267 diguanylate cyclase C1C91_05220 SM00938 Nitrogen regulatory protein P-II C1C91_05285 SM00904 Riboflavin kinase C1C91_05300 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C1C91_05330 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C1C91_05340 SM00927 DNA mismatch repair enzyme MutH C1C91_05375 SM00382 ATPases associated with a variety of cellular activities C1C91_05375 SM00962 SRP54-type protein, GTPase domain C1C91_05375 SM00963 SRP54-type protein, helical bundle domain C1C91_05385 SM01091 Transporter associated domain C1C91_05400 SM00671 Sel1-like repeats. C1C91_05425 SM00062 Bacterial periplasmic substrate-binding proteins C1C91_05425 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C1C91_05430 SM00382 ATPases associated with a variety of cellular activities C1C91_05445 SM00382 ATPases associated with a variety of cellular activities C1C91_05460 SM00938 Nitrogen regulatory protein P-II C1C91_05535 SM01152 C1C91_05535 C1C91_05555 SM00382 ATPases associated with a variety of cellular activities C1C91_05570 SM00487 DEAD-like helicases superfamily C1C91_05570 SM00490 helicase superfamily c-terminal domain C1C91_05615 SM00411 bacterial (prokaryotic) histone like domain C1C91_05630 SM00382 ATPases associated with a variety of cellular activities C1C91_05655 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C1C91_05655 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C1C91_05655 SM00091 PAS domain C1C91_05655 SM00267 diguanylate cyclase C1C91_05670 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain C1C91_05675 SM01133 C1C91_05675 C1C91_05810 SM01091 Transporter associated domain C1C91_05865 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C1C91_05875 SM00382 ATPases associated with a variety of cellular activities C1C91_05890 SM00533 DNA-binding domain of DNA mismatch repair MUTS family C1C91_05890 SM00534 ATPase domain of DNA mismatch repair MUTS family C1C91_05905 SM00347 helix_turn_helix multiple antibiotic resistance protein C1C91_05935 SM01207 C1C91_05935 C1C91_05940 SM00905 Dihydroneopterin aldolase C1C91_05960 SM00833 Cobalamin synthesis protein cobW C-terminal domain C1C91_05980 SM00052 Putative diguanylate phosphodiesterase C1C91_05995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_05995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_06000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_06000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_06025 SM00345 helix_turn_helix gluconate operon transcriptional repressor C1C91_06025 SM00895 C1C91_06025 C1C91_06035 SM00644 C1C91_06035 C1C91_06095 SM00957 SecA DEAD-like domain C1C91_06095 SM00958 SecA preprotein cross-linking domain C1C91_06110 SM00864 Tubulin/FtsZ family, GTPase domain C1C91_06110 SM00865 Tubulin/FtsZ family, C-terminal domain C1C91_06115 SM00842 Cell division protein FtsA C1C91_06205 SM00749 bacterial OsmY and nodulation domain C1C91_06255 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C1C91_06260 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C1C91_06335 SM00382 ATPases associated with a variety of cellular activities C1C91_06355 SM00116 Domain in cystathionine beta-synthase and other proteins. C1C91_06360 SM00382 ATPases associated with a variety of cellular activities C1C91_06495 SM00382 ATPases associated with a variety of cellular activities C1C91_06505 SM00876 Biotin and Thiamin Synthesis associated domain C1C91_06545 SM00448 cheY-homologous receiver domain C1C91_06545 SM00862 Transcriptional regulatory protein, C terminal C1C91_06550 SM00388 His Kinase A (phosphoacceptor) domain C1C91_06630 SM00316 Ribosomal protein S1-like RNA-binding domain C1C91_06705 SM00382 ATPases associated with a variety of cellular activities C1C91_06720 SM00965 Secretin and TonB N terminus short domain C1C91_06750 SM00052 Putative diguanylate phosphodiesterase C1C91_06750 SM00267 diguanylate cyclase C1C91_06785 SM00345 helix_turn_helix gluconate operon transcriptional repressor C1C91_06785 SM00866 C1C91_06785 C1C91_06790 SM00947 Carbonic anhydrase C1C91_06805 SM00382 ATPases associated with a variety of cellular activities C1C91_06810 SM00382 ATPases associated with a variety of cellular activities C1C91_06810 SM00962 SRP54-type protein, GTPase domain C1C91_06810 SM00963 SRP54-type protein, helical bundle domain C1C91_06840 SM00155 Phospholipase D. Active site motifs. C1C91_06845 SM00062 Bacterial periplasmic substrate-binding proteins C1C91_06935 SM00822 C1C91_06935 C1C91_07010 SM00662 RNA polymerases D C1C91_07015 SM00363 S4 RNA-binding domain C1C91_07015 SM01390 C1C91_07015 C1C91_07085 SM01374 C1C91_07085 C1C91_07105 SM00322 K homology RNA-binding domain C1C91_07120 SM01382 C1C91_07120 C1C91_07120 SM01383 C1C91_07120 C1C91_07140 SM01403 C1C91_07140 C1C91_07150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_07150 SM00387 Histidine kinase-like ATPases C1C91_07150 SM00388 His Kinase A (phosphoacceptor) domain C1C91_07155 SM00448 cheY-homologous receiver domain C1C91_07155 SM00862 Transcriptional regulatory protein, C terminal C1C91_07165 SM00316 Ribosomal protein S1-like RNA-binding domain C1C91_07165 SM00732 Likely ribonuclease with RNase H fold. C1C91_07210 SM00450 Rhodanese Homology Domain C1C91_07230 SM00354 helix_turn _helix lactose operon repressor C1C91_07240 SM00342 helix_turn_helix, arabinose operon control protein C1C91_07265 SM00155 Phospholipase D. Active site motifs. C1C91_07270 SM00487 DEAD-like helicases superfamily C1C91_07270 SM00490 helicase superfamily c-terminal domain C1C91_07305 SM01230 C1C91_07305 C1C91_07315 SM00091 PAS domain C1C91_07315 SM00387 Histidine kinase-like ATPases C1C91_07315 SM00388 His Kinase A (phosphoacceptor) domain C1C91_07320 SM00382 ATPases associated with a variety of cellular activities C1C91_07320 SM00448 cheY-homologous receiver domain C1C91_07330 SM00729 Elongator protein 3, MiaB family, Radical SAM C1C91_07390 SM00257 Lysin motif C1C91_07465 SM00530 Helix-turn-helix XRE-family like proteins C1C91_07515 SM00326 Src homology 3 domains C1C91_07555 SM00382 ATPases associated with a variety of cellular activities C1C91_07575 SM00829 Enoylreductase C1C91_07635 SM01038 Beta galactosidase small chain C1C91_07640 SM00354 helix_turn _helix lactose operon repressor C1C91_07680 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C1C91_07680 SM00474 3'-5' exonuclease C1C91_07680 SM00475 5'-3' exonuclease C1C91_07680 SM00482 DNA polymerase A domain C1C91_07710 SM00448 cheY-homologous receiver domain C1C91_07710 SM00862 Transcriptional regulatory protein, C terminal C1C91_07715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_07715 SM00387 Histidine kinase-like ATPases C1C91_07715 SM00388 His Kinase A (phosphoacceptor) domain C1C91_07745 SM00563 Phosphate acyltransferases C1C91_07780 SM00354 helix_turn _helix lactose operon repressor C1C91_07840 SM00829 Enoylreductase C1C91_07910 SM00360 RNA recognition motif C1C91_07925 SM01001 AIR carboxylase C1C91_07940 SM00448 cheY-homologous receiver domain C1C91_07940 SM00850 LytTr DNA-binding domain C1C91_07945 SM00387 Histidine kinase-like ATPases C1C91_08000 SM00267 diguanylate cyclase C1C91_08045 SM00267 diguanylate cyclase C1C91_08065 SM00072 Guanylate kinase homologues. C1C91_08070 SM01409 C1C91_08070 C1C91_08075 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C1C91_08075 SM00954 Region found in RelA / SpoT proteins C1C91_08100 SM00458 Ricin-type beta-trefoil C1C91_08140 SM00091 PAS domain C1C91_08140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_08140 SM00387 Histidine kinase-like ATPases C1C91_08170 SM00387 Histidine kinase-like ATPases C1C91_08170 SM00388 His Kinase A (phosphoacceptor) domain C1C91_08175 SM00448 cheY-homologous receiver domain C1C91_08175 SM00862 Transcriptional regulatory protein, C terminal C1C91_08185 SM00342 helix_turn_helix, arabinose operon control protein C1C91_08215 SM00342 helix_turn_helix, arabinose operon control protein C1C91_08225 SM00387 Histidine kinase-like ATPases C1C91_08225 SM00433 TopoisomeraseII C1C91_08235 SM00480 DNA polymerase III beta subunit C1C91_08240 SM00382 ATPases associated with a variety of cellular activities C1C91_08240 SM00760 Bacterial dnaA protein helix-turn-helix domain C1C91_08245 SM00062 Bacterial periplasmic substrate-binding proteins C1C91_08255 SM00382 ATPases associated with a variety of cellular activities C1C91_08270 SM01234 C1C91_08270 C1C91_08315 SM00857 Resolvase, N terminal domain C1C91_08330 SM00530 Helix-turn-helix XRE-family like proteins C1C91_08355 SM00382 ATPases associated with a variety of cellular activities C1C91_08360 SM00382 ATPases associated with a variety of cellular activities C1C91_08375 SM01228 C1C91_08375 C1C91_08390 SM00470 ParB-like nuclease domain C1C91_08430 SM00382 ATPases associated with a variety of cellular activities C1C91_08455 SM00387 Histidine kinase-like ATPases C1C91_08455 SM00388 His Kinase A (phosphoacceptor) domain C1C91_08460 SM00448 cheY-homologous receiver domain C1C91_08460 SM00862 Transcriptional regulatory protein, C terminal C1C91_08465 SM00420 helix_turn_helix, Deoxyribose operon repressor C1C91_08465 SM01134 C1C91_08465 C1C91_08485 SM00382 ATPases associated with a variety of cellular activities C1C91_08500 SM00530 Helix-turn-helix XRE-family like proteins C1C91_08505 SM00487 DEAD-like helicases superfamily C1C91_08580 SM00382 ATPases associated with a variety of cellular activities C1C91_08580 SM01086 C-terminal, D2-small domain, of ClpB protein C1C91_08590 SM00052 Putative diguanylate phosphodiesterase C1C91_08590 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C1C91_08590 SM00091 PAS domain C1C91_08590 SM00267 diguanylate cyclase C1C91_08605 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C1C91_08610 SM00421 helix_turn_helix, Lux Regulon C1C91_08715 SM01004 Delta-aminolevulinic acid dehydratase C1C91_08725 SM00052 Putative diguanylate phosphodiesterase C1C91_08725 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C1C91_08725 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C1C91_08725 SM00091 PAS domain C1C91_08725 SM00267 diguanylate cyclase C1C91_08750 SM00487 DEAD-like helicases superfamily C1C91_08750 SM00490 helicase superfamily c-terminal domain C1C91_08760 SM00357 Cold shock protein domain C1C91_08760 SM00382 ATPases associated with a variety of cellular activities C1C91_08760 SM00959 Rho termination factor, N-terminal domain C1C91_08795 SM00450 Rhodanese Homology Domain C1C91_08805 SM00342 helix_turn_helix, arabinose operon control protein C1C91_08810 SM00382 ATPases associated with a variety of cellular activities C1C91_08815 SM00382 ATPases associated with a variety of cellular activities C1C91_08835 SM00354 helix_turn _helix lactose operon repressor C1C91_08840 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C1C91_08840 SM00382 ATPases associated with a variety of cellular activities C1C91_08845 SM00849 Metallo-beta-lactamase superfamily C1C91_08895 SM00052 Putative diguanylate phosphodiesterase C1C91_08905 SM00836 DALR anticodon binding domain C1C91_08980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_08980 SM00387 Histidine kinase-like ATPases C1C91_08980 SM00388 His Kinase A (phosphoacceptor) domain C1C91_08985 SM00448 cheY-homologous receiver domain C1C91_08985 SM00862 Transcriptional regulatory protein, C terminal C1C91_09045 SM00881 CoA binding domain C1C91_09125 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain C1C91_09125 SM01232 C1C91_09125 C1C91_09175 SM00487 DEAD-like helicases superfamily C1C91_09175 SM00490 helicase superfamily c-terminal domain C1C91_09200 SM01101 C1C91_09200 C1C91_09295 SM00422 helix_turn_helix, mercury resistance C1C91_09300 SM00267 diguanylate cyclase C1C91_09330 SM00382 ATPases associated with a variety of cellular activities C1C91_09335 SM00062 Bacterial periplasmic substrate-binding proteins C1C91_09360 SM00563 Phosphate acyltransferases C1C91_09440 SM00919 Malic enzyme, NAD binding domain C1C91_09440 SM01274 C1C91_09440 C1C91_09450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_09450 SM00387 Histidine kinase-like ATPases C1C91_09450 SM00388 His Kinase A (phosphoacceptor) domain C1C91_09510 SM00642 Alpha-amylase domain C1C91_09555 SM01230 C1C91_09555 C1C91_09575 SM00382 ATPases associated with a variety of cellular activities C1C91_09610 SM00341 Helicase and RNase D C-terminal C1C91_09610 SM00487 DEAD-like helicases superfamily C1C91_09610 SM00490 helicase superfamily c-terminal domain C1C91_09610 SM00956 C1C91_09610 C1C91_09640 SM00924 MgtE intracellular N domain C1C91_09675 SM00382 ATPases associated with a variety of cellular activities C1C91_09700 SM00382 ATPases associated with a variety of cellular activities C1C91_09700 SM01086 C-terminal, D2-small domain, of ClpB protein C1C91_09715 SM00836 DALR anticodon binding domain C1C91_09715 SM01016 Arginyl tRNA synthetase N terminal dom C1C91_09720 SM00464 Found in ATP-dependent protease La (LON) C1C91_09765 SM00354 helix_turn _helix lactose operon repressor C1C91_09770 SM01038 Beta galactosidase small chain C1C91_09780 SM00382 ATPases associated with a variety of cellular activities C1C91_09790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_09790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_09850 SM01118 C1C91_09850 C1C91_09855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_09855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_09880 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C1C91_09880 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C1C91_09910 SM00363 S4 RNA-binding domain C1C91_09920 SM00382 ATPases associated with a variety of cellular activities C1C91_09920 SM01086 C-terminal, D2-small domain, of ClpB protein C1C91_09925 SM00849 Metallo-beta-lactamase superfamily C1C91_09935 SM00344 helix_turn_helix ASNC type C1C91_09940 SM00062 Bacterial periplasmic substrate-binding proteins C1C91_09945 SM00116 Domain in cystathionine beta-synthase and other proteins. C1C91_09965 SM00387 Histidine kinase-like ATPases C1C91_09965 SM00388 His Kinase A (phosphoacceptor) domain C1C91_09975 SM00382 ATPases associated with a variety of cellular activities C1C91_09975 SM00448 cheY-homologous receiver domain C1C91_10010 SM00448 cheY-homologous receiver domain C1C91_10010 SM00862 Transcriptional regulatory protein, C terminal C1C91_10015 SM00387 Histidine kinase-like ATPases C1C91_10035 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C1C91_10035 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C1C91_10035 SM00493 C1C91_10035 C1C91_10090 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. C1C91_10090 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C1C91_10095 SM00649 Ribosomal protein L11/L12 C1C91_10120 SM00663 RNA polymerase I subunit A N-terminus C1C91_10160 SM00838 Elongation factor G C-terminus C1C91_10160 SM00889 Elongation factor G, domain IV C1C91_10220 SM01120 C1C91_10220 C1C91_10230 SM00091 PAS domain C1C91_10260 SM00822 C1C91_10260 C1C91_10270 SM00014 Acid phosphatase homologues C1C91_10290 SM01060 C1C91_10290 C1C91_10300 SM00342 helix_turn_helix, arabinose operon control protein C1C91_10300 SM00871 Bacterial transcription activator, effector binding domain C1C91_10315 SM00267 diguanylate cyclase C1C91_10325 SM00382 ATPases associated with a variety of cellular activities C1C91_10350 SM00345 helix_turn_helix gluconate operon transcriptional repressor C1C91_10350 SM00866 C1C91_10350 C1C91_10355 SM00530 Helix-turn-helix XRE-family like proteins C1C91_10405 SM00938 Nitrogen regulatory protein P-II C1C91_10410 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C1C91_10410 SM00267 diguanylate cyclase C1C91_10420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_10430 SM00448 cheY-homologous receiver domain C1C91_10430 SM00862 Transcriptional regulatory protein, C terminal C1C91_10435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_10435 SM00387 Histidine kinase-like ATPases C1C91_10435 SM00388 His Kinase A (phosphoacceptor) domain C1C91_10445 SM00357 Cold shock protein domain C1C91_10460 SM00062 Bacterial periplasmic substrate-binding proteins C1C91_10470 SM00421 helix_turn_helix, Lux Regulon C1C91_10485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_10485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_10515 SM00530 Helix-turn-helix XRE-family like proteins C1C91_10595 SM01219 C1C91_10595 C1C91_10660 SM00852 Probable molybdopterin binding domain C1C91_10680 SM00344 helix_turn_helix ASNC type C1C91_10695 SM00642 Alpha-amylase domain C1C91_10850 SM00487 DEAD-like helicases superfamily C1C91_10850 SM00490 helicase superfamily c-terminal domain C1C91_10910 SM00357 Cold shock protein domain C1C91_10910 SM00955 C1C91_10910 C1C91_10925 SM00421 helix_turn_helix, Lux Regulon C1C91_11000 SM00387 Histidine kinase-like ATPases C1C91_11000 SM00433 TopoisomeraseII C1C91_11005 SM00434 DNA Topoisomerase IV C1C91_11050 SM00271 DnaJ molecular chaperone homology domain C1C91_11085 SM00563 Phosphate acyltransferases C1C91_11105 SM00465 GIY-YIG type nucleases (URI domain) C1C91_11115 SM00986 Uracil DNA glycosylase superfamily C1C91_11115 SM00987 UreE urease accessory protein, C-terminal domain C1C91_11135 SM00382 ATPases associated with a variety of cellular activities C1C91_11200 SM00344 helix_turn_helix ASNC type C1C91_11205 SM01266 C1C91_11205 C1C91_11210 SM00642 Alpha-amylase domain C1C91_11220 SM00354 helix_turn _helix lactose operon repressor C1C91_11235 SM00870 C1C91_11235 C1C91_11250 SM00851 MGS-like domain C1C91_11330 SM00382 ATPases associated with a variety of cellular activities C1C91_11400 SM01130 C1C91_11400 C1C91_11405 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C1C91_11405 SM00267 diguanylate cyclase C1C91_11460 SM00478 endonuclease III C1C91_11470 SM00382 ATPases associated with a variety of cellular activities C1C91_11490 SM01118 C1C91_11490 C1C91_11510 SM00345 helix_turn_helix gluconate operon transcriptional repressor C1C91_11510 SM00895 C1C91_11510 C1C91_11525 SM00363 S4 RNA-binding domain C1C91_11540 SM00382 ATPases associated with a variety of cellular activities C1C91_11590 SM00421 helix_turn_helix, Lux Regulon C1C91_11635 SM00342 helix_turn_helix, arabinose operon control protein C1C91_11680 SM00345 helix_turn_helix gluconate operon transcriptional repressor C1C91_11690 SM00450 Rhodanese Homology Domain C1C91_11705 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C1C91_11705 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C1C91_11705 SM00091 PAS domain C1C91_11705 SM00267 diguanylate cyclase C1C91_11720 SM00859 Semialdehyde dehydrogenase, NAD binding domain C1C91_11790 SM01266 C1C91_11790 C1C91_11800 SM00062 Bacterial periplasmic substrate-binding proteins C1C91_11805 SM00382 ATPases associated with a variety of cellular activities C1C91_11835 SM00822 C1C91_11835 C1C91_11850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_11850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_11860 SM00287 Bacterial SH3 domain homologues C1C91_11880 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1C91_11985 SM00358 Double-stranded RNA binding motif C1C91_11985 SM00535 Ribonuclease III family C1C91_12005 SM00644 C1C91_12005 C1C91_12015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_12015 SM00387 Histidine kinase-like ATPases C1C91_12015 SM00388 His Kinase A (phosphoacceptor) domain C1C91_12015 SM00448 cheY-homologous receiver domain C1C91_12025 SM00954 Region found in RelA / SpoT proteins C1C91_12040 SM01192 C1C91_12040 C1C91_12040 SM01193 C1C91_12040 C1C91_12105 SM00400 zinc finger C1C91_12105 SM00493 C1C91_12105 C1C91_12105 SM00766 DNA primase DnaG DnaB-binding C1C91_12120 SM00028 Tetratricopeptide repeats C1C91_12125 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins C1C91_12125 SM00632 C1C91_12125 C1C91_12125 SM00642 Alpha-amylase domain C1C91_12145 SM01209 C1C91_12145 C1C91_12145 SM01210 C1C91_12145 C1C91_12150 SM00798 AICARFT/IMPCHase bienzyme C1C91_12150 SM00851 MGS-like domain C1C91_12155 SM00422 helix_turn_helix, mercury resistance C1C91_12175 SM00729 Elongator protein 3, MiaB family, Radical SAM C1C91_12205 SM00244 prohibitin homologues C1C91_12250 SM00091 PAS domain C1C91_12250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_12270 SM00382 ATPases associated with a variety of cellular activities C1C91_12325 SM00382 ATPases associated with a variety of cellular activities C1C91_12380 SM00487 DEAD-like helicases superfamily C1C91_12380 SM00490 helicase superfamily c-terminal domain C1C91_12380 SM00847 Helicase associated domain (HA2) Add an annotation C1C91_12415 SM00014 Acid phosphatase homologues C1C91_12485 SM00670 Large family of predicted nucleotide-binding domains C1C91_12490 SM00382 ATPases associated with a variety of cellular activities C1C91_12525 SM01329 C1C91_12525 C1C91_12530 SM00917 LeuA allosteric (dimerisation) domain C1C91_12540 SM00014 Acid phosphatase homologues C1C91_12595 SM01130 C1C91_12595 C1C91_12640 SM00073 Histidine Phosphotransfer domain C1C91_12640 SM00091 PAS domain C1C91_12640 SM00387 Histidine kinase-like ATPases C1C91_12640 SM00388 His Kinase A (phosphoacceptor) domain C1C91_12640 SM00448 cheY-homologous receiver domain C1C91_12645 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C1C91_12655 SM00062 Bacterial periplasmic substrate-binding proteins C1C91_12655 SM00073 Histidine Phosphotransfer domain C1C91_12655 SM00387 Histidine kinase-like ATPases C1C91_12655 SM00388 His Kinase A (phosphoacceptor) domain C1C91_12655 SM00448 cheY-homologous receiver domain C1C91_12660 SM00052 Putative diguanylate phosphodiesterase C1C91_12660 SM00448 cheY-homologous receiver domain C1C91_12665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_12665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_12670 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. C1C91_12685 SM00382 ATPases associated with a variety of cellular activities C1C91_12685 SM00930 C1C91_12685 C1C91_12715 SM00257 Lysin motif C1C91_12715 SM00646 C1C91_12715 C1C91_12720 SM00853 MutL C terminal dimerisation domain C1C91_12720 SM01340 C1C91_12720 C1C91_12740 SM00244 prohibitin homologues C1C91_12745 SM00244 prohibitin homologues C1C91_12780 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C1C91_12790 SM00530 Helix-turn-helix XRE-family like proteins C1C91_12805 SM00650 Ribosomal RNA adenine dimethylases C1C91_12835 SM00271 DnaJ molecular chaperone homology domain C1C91_12850 SM00382 ATPases associated with a variety of cellular activities C1C91_12870 SM01259 C1C91_12870 C1C91_12885 SM00984 UDP binding domain C1C91_12895 SM00382 ATPases associated with a variety of cellular activities C1C91_12945 SM00387 Histidine kinase-like ATPases C1C91_12945 SM00388 His Kinase A (phosphoacceptor) domain C1C91_12945 SM00448 cheY-homologous receiver domain C1C91_12950 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins C1C91_12950 SM00495 Chitin-binding domain type 3 C1C91_12950 SM00636 C1C91_12950 C1C91_12960 SM00100 Cyclic nucleotide-monophosphate binding domain C1C91_12960 SM00419 helix_turn_helix, cAMP Regulatory protein C1C91_12990 SM00267 diguanylate cyclase C1C91_13000 SM00260 Two component signalling adaptor domain C1C91_13000 SM00448 cheY-homologous receiver domain C1C91_13025 SM00320 WD40 repeats C1C91_13035 SM00382 ATPases associated with a variety of cellular activities C1C91_13035 SM00448 cheY-homologous receiver domain C1C91_13040 SM00028 Tetratricopeptide repeats C1C91_13060 SM00978 C1C91_13060 C1C91_13065 SM00382 ATPases associated with a variety of cellular activities C1C91_13070 SM01005 Alanine racemase, C-terminal domain C1C91_13100 SM00448 cheY-homologous receiver domain C1C91_13100 SM00850 LytTr DNA-binding domain C1C91_13105 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C1C91_13115 SM00052 Putative diguanylate phosphodiesterase C1C91_13180 SM00342 helix_turn_helix, arabinose operon control protein C1C91_13180 SM00478 endonuclease III C1C91_13180 SM01009 AlkA N-terminal domain C1C91_13190 SM00463 Small MutS-related domain C1C91_13220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_13220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_13245 SM01007 Class II Aldolase and Adducin N-terminal domain C1C91_13260 SM00420 helix_turn_helix, Deoxyribose operon repressor C1C91_13260 SM01134 C1C91_13260 C1C91_13300 SM00830 Chorismate mutase type II C1C91_13330 SM00422 helix_turn_helix, mercury resistance C1C91_13430 SM00448 cheY-homologous receiver domain C1C91_13430 SM00862 Transcriptional regulatory protein, C terminal C1C91_13435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_13435 SM00387 Histidine kinase-like ATPases C1C91_13435 SM00388 His Kinase A (phosphoacceptor) domain C1C91_13505 SM00900 C1C91_13505 C1C91_13545 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_13545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_13575 SM01329 C1C91_13575 C1C91_13580 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C1C91_13580 SM00475 5'-3' exonuclease C1C91_13590 SM00267 diguanylate cyclase C1C91_13595 SM00028 Tetratricopeptide repeats C1C91_13675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C1C91_13720 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C1C91_13730 SM00935 Outer membrane protein (OmpH-like) C1C91_13760 SM00481 DNA polymerase alpha chain like domain C1C91_13795 SM00382 ATPases associated with a variety of cellular activities C1C91_13810 SM00977 TilS substrate C-terminal domain C1C91_13815 SM00267 diguanylate cyclase C1C91_13850 SM00421 helix_turn_helix, Lux Regulon C1C91_13850 SM00448 cheY-homologous receiver domain C1C91_13860 SM00642 Alpha-amylase domain C1C91_13885 SM00062 Bacterial periplasmic substrate-binding proteins C1C91_13925 SM00771 ZipA, C-terminal domain (FtsZ-binding) C1C91_13930 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C1C91_13930 SM00292 breast cancer carboxy-terminal domain C1C91_13930 SM00532 Ligase N family C1C91_13975 SM00347 helix_turn_helix multiple antibiotic resistance protein C1C91_13980 SM00387 Histidine kinase-like ATPases C1C91_13985 SM00448 cheY-homologous receiver domain C1C91_14010 SM00342 helix_turn_helix, arabinose operon control protein C1C91_14025 SM00267 diguanylate cyclase C1C91_14035 SM00448 cheY-homologous receiver domain C1C91_14035 SM00862 Transcriptional regulatory protein, C terminal C1C91_14075 SM00382 ATPases associated with a variety of cellular activities C1C91_14090 SM00062 Bacterial periplasmic substrate-binding proteins C1C91_14105 SM00382 ATPases associated with a variety of cellular activities C1C91_14150 SM00267 diguanylate cyclase C1C91_14165 SM00342 helix_turn_helix, arabinose operon control protein C1C91_14170 SM00919 Malic enzyme, NAD binding domain C1C91_14170 SM01274 C1C91_14170 C1C91_14195 SM00530 Helix-turn-helix XRE-family like proteins C1C91_14210 SM00267 diguanylate cyclase C1C91_14225 SM00729 Elongator protein 3, MiaB family, Radical SAM C1C91_14285 SM00155 Phospholipase D. Active site motifs. C1C91_14375 SM00062 Bacterial periplasmic substrate-binding proteins C1C91_14375 SM00091 PAS domain C1C91_14375 SM00387 Histidine kinase-like ATPases C1C91_14375 SM00388 His Kinase A (phosphoacceptor) domain C1C91_14375 SM00448 cheY-homologous receiver domain C1C91_14425 SM00530 Helix-turn-helix XRE-family like proteins C1C91_14465 SM00382 ATPases associated with a variety of cellular activities C1C91_14530 SM00382 ATPases associated with a variety of cellular activities C1C91_14565 SM00382 ATPases associated with a variety of cellular activities C1C91_14570 SM00382 ATPases associated with a variety of cellular activities C1C91_14585 SM00448 cheY-homologous receiver domain C1C91_14585 SM00862 Transcriptional regulatory protein, C terminal C1C91_14715 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C1C91_14715 SM00091 PAS domain C1C91_14715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_14725 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C1C91_14745 SM00919 Malic enzyme, NAD binding domain C1C91_14745 SM01274 C1C91_14745 C1C91_14785 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. C1C91_14845 SM01329 C1C91_14845 C1C91_14865 SM00528 Domain in histone-like proteins of HNS family C1C91_14890 SM00382 ATPases associated with a variety of cellular activities C1C91_14910 SM00267 diguanylate cyclase C1C91_14930 SM00271 DnaJ molecular chaperone homology domain C1C91_14950 SM00640 Glycosyl hydrolases family 32 C1C91_14955 SM00354 helix_turn _helix lactose operon repressor C1C91_14980 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C1C91_15005 SM00091 PAS domain C1C91_15005 SM00267 diguanylate cyclase C1C91_15050 SM00028 Tetratricopeptide repeats C1C91_15050 SM00448 cheY-homologous receiver domain C1C91_15080 SM00347 helix_turn_helix multiple antibiotic resistance protein C1C91_15180 SM00530 Helix-turn-helix XRE-family like proteins C1C91_15215 SM00481 DNA polymerase alpha chain like domain C1C91_15235 SM00363 S4 RNA-binding domain C1C91_15305 SM00530 Helix-turn-helix XRE-family like proteins C1C91_15405 SM00481 DNA polymerase alpha chain like domain C1C91_15455 SM00448 cheY-homologous receiver domain C1C91_15455 SM00862 Transcriptional regulatory protein, C terminal C1C91_15575 SM00226 Low molecular weight phosphatase family C1C91_15615 SM00487 DEAD-like helicases superfamily C1C91_15615 SM00490 helicase superfamily c-terminal domain C1C91_15640 SM00861 Transketolase, pyrimidine binding domain C1C91_15645 SM01321 C1C91_15645 C1C91_15660 SM00357 Cold shock protein domain C1C91_15705 SM01321 C1C91_15705 C1C91_15715 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C1C91_15720 SM00363 S4 RNA-binding domain C1C91_15735 SM01321 C1C91_15735 C1C91_15760 SM00858 C1C91_15760 C1C91_15765 SM00260 Two component signalling adaptor domain C1C91_15765 SM00448 cheY-homologous receiver domain C1C91_15770 SM00138 Methyltransferase, chemotaxis proteins C1C91_15815 SM00047 Lysozyme subfamily 2 C1C91_15830 SM01321 C1C91_15830 C1C91_15855 SM01321 C1C91_15855 C1C91_15890 SM00382 ATPases associated with a variety of cellular activities C1C91_15895 SM00091 PAS domain C1C91_15895 SM00387 Histidine kinase-like ATPases C1C91_15895 SM00388 His Kinase A (phosphoacceptor) domain C1C91_15900 SM00382 ATPases associated with a variety of cellular activities C1C91_15900 SM00448 cheY-homologous receiver domain C1C91_15965 SM00382 ATPases associated with a variety of cellular activities C1C91_15975 SM01091 Transporter associated domain C1C91_16000 SM00382 ATPases associated with a variety of cellular activities C1C91_16010 SM00062 Bacterial periplasmic substrate-binding proteins C1C91_16010 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C1C91_16035 SM00098 Alkaline phosphatase homologues C1C91_16040 SM00098 Alkaline phosphatase homologues C1C91_16065 SM00491 C1C91_16065 C1C91_16105 SM00382 ATPases associated with a variety of cellular activities C1C91_16125 SM00421 helix_turn_helix, Lux Regulon C1C91_16125 SM00448 cheY-homologous receiver domain C1C91_16160 SM00382 ATPases associated with a variety of cellular activities C1C91_16220 SM00829 Enoylreductase C1C91_16250 SM00840 C1C91_16250 C1C91_16310 SM00899 C1C91_16310 C1C91_16325 SM00382 ATPases associated with a variety of cellular activities C1C91_16335 SM00062 Bacterial periplasmic substrate-binding proteins C1C91_16345 SM00382 ATPases associated with a variety of cellular activities C1C91_16385 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain C1C91_16390 SM00851 MGS-like domain C1C91_16390 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C1C91_16405 SM00917 LeuA allosteric (dimerisation) domain C1C91_16440 SM00487 DEAD-like helicases superfamily C1C91_16440 SM00490 helicase superfamily c-terminal domain C1C91_16450 SM01351 C1C91_16450 C1C91_16480 SM00729 Elongator protein 3, MiaB family, Radical SAM C1C91_16485 SM00382 ATPases associated with a variety of cellular activities C1C91_16505 SM00052 Putative diguanylate phosphodiesterase C1C91_16505 SM00267 diguanylate cyclase C1C91_16510 SM00327 von Willebrand factor (vWF) type A domain C1C91_16510 SM00710 Parallel beta-helix repeats C1C91_16550 SM00382 ATPases associated with a variety of cellular activities C1C91_16585 SM00014 Acid phosphatase homologues C1C91_16595 SM00859 Semialdehyde dehydrogenase, NAD binding domain C1C91_16640 SM00342 helix_turn_helix, arabinose operon control protein C1C91_16685 SM00267 diguanylate cyclase C1C91_16750 SM00829 Enoylreductase C1C91_16760 SM01091 Transporter associated domain C1C91_16800 SM00487 DEAD-like helicases superfamily C1C91_16800 SM00490 helicase superfamily c-terminal domain C1C91_16810 SM00052 Putative diguanylate phosphodiesterase C1C91_16810 SM00267 diguanylate cyclase C1C91_16830 SM00479 C1C91_16830 C1C91_16835 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_16880 SM00382 ATPases associated with a variety of cellular activities C1C91_16920 SM00487 DEAD-like helicases superfamily C1C91_16980 SM00116 Domain in cystathionine beta-synthase and other proteins. C1C91_16995 SM01323 C1C91_16995 C1C91_17010 SM00450 Rhodanese Homology Domain C1C91_17015 SM00028 Tetratricopeptide repeats C1C91_17060 SM00271 DnaJ molecular chaperone homology domain C1C91_17085 SM00562 C1C91_17085 C1C91_17095 SM00028 Tetratricopeptide repeats C1C91_17100 SM00530 Helix-turn-helix XRE-family like proteins C1C91_17120 SM00564 beta-propeller repeat C1C91_17135 SM00062 Bacterial periplasmic substrate-binding proteins C1C91_17140 SM01211 C1C91_17140 C1C91_17185 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C1C91_17240 SM00327 von Willebrand factor (vWF) type A domain C1C91_17300 SM01126 C1C91_17300 C1C91_17405 SM00360 RNA recognition motif C1C91_17430 SM00091 PAS domain C1C91_17435 SM00448 cheY-homologous receiver domain C1C91_17450 SM00052 Putative diguanylate phosphodiesterase C1C91_17450 SM00267 diguanylate cyclase C1C91_17495 SM00316 Ribosomal protein S1-like RNA-binding domain C1C91_17500 SM00411 bacterial (prokaryotic) histone like domain C1C91_17510 SM00028 Tetratricopeptide repeats C1C91_17515 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C1C91_17525 SM01144 C1C91_17525 C1C91_17550 SM00528 Domain in histone-like proteins of HNS family C1C91_17630 SM00530 Helix-turn-helix XRE-family like proteins C1C91_17695 SM00530 Helix-turn-helix XRE-family like proteins C1C91_17765 SM00487 DEAD-like helicases superfamily C1C91_17840 SM00487 DEAD-like helicases superfamily C1C91_17840 SM00490 helicase superfamily c-terminal domain C1C91_17845 SM00271 DnaJ molecular chaperone homology domain C1C91_17890 SM00342 helix_turn_helix, arabinose operon control protein C1C91_17890 SM00871 Bacterial transcription activator, effector binding domain C1C91_17895 SM00052 Putative diguanylate phosphodiesterase C1C91_17910 SM00267 diguanylate cyclase C1C91_17950 SM00116 Domain in cystathionine beta-synthase and other proteins. C1C91_18045 SM00448 cheY-homologous receiver domain C1C91_18065 SM00062 Bacterial periplasmic substrate-binding proteins C1C91_18085 SM00487 DEAD-like helicases superfamily C1C91_18085 SM00490 helicase superfamily c-terminal domain C1C91_18110 SM00345 helix_turn_helix gluconate operon transcriptional repressor C1C91_18125 SM00763 PrkA AAA domain C1C91_18130 SM00487 DEAD-like helicases superfamily C1C91_18130 SM00490 helicase superfamily c-terminal domain C1C91_18195 SM00387 Histidine kinase-like ATPases C1C91_18195 SM00388 His Kinase A (phosphoacceptor) domain C1C91_18195 SM00448 cheY-homologous receiver domain C1C91_18200 SM00382 ATPases associated with a variety of cellular activities C1C91_18205 SM00382 ATPases associated with a variety of cellular activities C1C91_18270 SM01118 C1C91_18270 C1C91_18295 SM00487 DEAD-like helicases superfamily C1C91_18295 SM00490 helicase superfamily c-terminal domain C1C91_18305 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. C1C91_18315 SM01144 C1C91_18315 C1C91_18335 SM00342 helix_turn_helix, arabinose operon control protein C1C91_18415 SM01126 C1C91_18415 C1C91_18495 SM01321 C1C91_18495 C1C91_18520 SM00782 PhnA Zinc-Ribbon C1C91_18555 SM00463 Small MutS-related domain C1C91_18575 SM00487 DEAD-like helicases superfamily C1C91_18575 SM00490 helicase superfamily c-terminal domain C1C91_18580 SM00953 C1C91_18580 C1C91_18595 SM00354 helix_turn _helix lactose operon repressor C1C91_18620 SM00925 MltA specific insert domain C1C91_18650 SM00434 DNA Topoisomerase IV C1C91_18660 SM00671 Sel1-like repeats. C1C91_18670 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C1C91_18710 SM00873 B3/4 domain C1C91_18710 SM00874 tRNA synthetase B5 domain C1C91_18710 SM00896 Ferredoxin-fold anticodon binding domain C1C91_18715 SM00411 bacterial (prokaryotic) histone like domain C1C91_18720 SM00062 Bacterial periplasmic substrate-binding proteins C1C91_18720 SM00387 Histidine kinase-like ATPases C1C91_18720 SM00388 His Kinase A (phosphoacceptor) domain C1C91_18720 SM00448 cheY-homologous receiver domain C1C91_18745 SM01321 C1C91_18745 C1C91_18760 SM00354 helix_turn _helix lactose operon repressor C1C91_18780 SM00382 ATPases associated with a variety of cellular activities C1C91_18795 SM01321 C1C91_18795 C1C91_18825 SM00100 Cyclic nucleotide-monophosphate binding domain C1C91_18825 SM00419 helix_turn_helix, cAMP Regulatory protein C1C91_18880 SM00945 ProQ/FINO family C1C91_18885 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C1C91_18885 SM00245 tail specific protease C1C91_18915 SM00981 C1C91_18915 C1C91_18925 SM00382 ATPases associated with a variety of cellular activities C1C91_18960 SM01126 C1C91_18960 C1C91_19000 SM00382 ATPases associated with a variety of cellular activities C1C91_19020 SM00825 Beta-ketoacyl synthase C1C91_19030 SM00822 C1C91_19030 C1C91_19035 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. C1C91_19070 SM00363 S4 RNA-binding domain C1C91_19075 SM00316 Ribosomal protein S1-like RNA-binding domain C1C91_19115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_19120 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase C1C91_19140 SM00450 Rhodanese Homology Domain C1C91_19145 SM00849 Metallo-beta-lactamase superfamily C1C91_19165 SM01321 C1C91_19165 C1C91_19185 SM00382 ATPases associated with a variety of cellular activities C1C91_19185 SM00487 DEAD-like helicases superfamily C1C91_19185 SM00490 helicase superfamily c-terminal domain C1C91_19185 SM00847 Helicase associated domain (HA2) Add an annotation C1C91_19190 SM00116 Domain in cystathionine beta-synthase and other proteins. C1C91_19195 SM00421 helix_turn_helix, Lux Regulon C1C91_19240 SM00342 helix_turn_helix, arabinose operon control protein C1C91_19255 SM00341 Helicase and RNase D C-terminal C1C91_19255 SM00474 3'-5' exonuclease C1C91_19320 SM00448 cheY-homologous receiver domain C1C91_19320 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C1C91_19325 SM00091 PAS domain C1C91_19330 SM00073 Histidine Phosphotransfer domain C1C91_19330 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C1C91_19330 SM00091 PAS domain C1C91_19330 SM00387 Histidine kinase-like ATPases C1C91_19330 SM00388 His Kinase A (phosphoacceptor) domain C1C91_19330 SM00448 cheY-homologous receiver domain C1C91_19380 SM00382 ATPases associated with a variety of cellular activities C1C91_19405 SM01322 C1C91_19405 C1C91_19440 SM00327 von Willebrand factor (vWF) type A domain C1C91_19445 SM00028 Tetratricopeptide repeats C1C91_19475 SM00052 Putative diguanylate phosphodiesterase C1C91_19485 SM00422 helix_turn_helix, mercury resistance C1C91_19580 SM00347 helix_turn_helix multiple antibiotic resistance protein C1C91_19665 SM00486 DNA polymerase type-B family C1C91_19675 SM00090 RIO-like kinase C1C91_19705 SM00518 AP endonuclease family 2 C1C91_19715 SM00342 helix_turn_helix, arabinose operon control protein C1C91_19725 SM00822 C1C91_19725 C1C91_19740 SM00267 diguanylate cyclase C1C91_19765 SM00382 ATPases associated with a variety of cellular activities C1C91_19775 SM00387 Histidine kinase-like ATPases C1C91_19775 SM00388 His Kinase A (phosphoacceptor) domain C1C91_19775 SM00448 cheY-homologous receiver domain C1C91_19780 SM00421 helix_turn_helix, Lux Regulon C1C91_19850 SM00857 Resolvase, N terminal domain C1C91_19875 SM00382 ATPases associated with a variety of cellular activities C1C91_19885 SM00487 DEAD-like helicases superfamily C1C91_19910 SM00885 D5 N terminal like C1C91_19945 SM00822 C1C91_19945 C1C91_20000 SM00422 helix_turn_helix, mercury resistance C1C91_20035 SM00100 Cyclic nucleotide-monophosphate binding domain C1C91_20035 SM00116 Domain in cystathionine beta-synthase and other proteins. C1C91_20055 SM00382 ATPases associated with a variety of cellular activities C1C91_20065 SM00411 bacterial (prokaryotic) histone like domain C1C91_20070 SM00382 ATPases associated with a variety of cellular activities C1C91_20070 SM00464 Found in ATP-dependent protease La (LON) C1C91_20075 SM00382 ATPases associated with a variety of cellular activities C1C91_20075 SM00994 ClpX C4-type zinc finger C1C91_20075 SM01086 C-terminal, D2-small domain, of ClpB protein C1C91_20100 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C1C91_20110 SM00382 ATPases associated with a variety of cellular activities C1C91_20125 SM00487 DEAD-like helicases superfamily C1C91_20125 SM00490 helicase superfamily c-terminal domain C1C91_20125 SM00982 C1C91_20125 C1C91_20125 SM01058 CarD-like/TRCF domain C1C91_20150 SM00855 Phosphoglycerate mutase family C1C91_20165 SM00364 Leucine-rich repeats, bacterial type C1C91_20165 SM00369 Leucine-rich repeats, typical (most populated) subfamily C1C91_20170 SM00347 helix_turn_helix multiple antibiotic resistance protein C1C91_20195 SM00382 ATPases associated with a variety of cellular activities C1C91_20250 SM01126 C1C91_20250 C1C91_20350 SM00857 Resolvase, N terminal domain C1C91_20375 SM00422 helix_turn_helix, mercury resistance C1C91_20400 SM00422 helix_turn_helix, mercury resistance C1C91_20500 SM00116 Domain in cystathionine beta-synthase and other proteins. C1C91_20500 SM01240 C1C91_20500 C1C91_20520 SM01321 C1C91_20520 C1C91_20600 SM00382 ATPases associated with a variety of cellular activities C1C91_20620 SM00382 ATPases associated with a variety of cellular activities C1C91_20625 SM00382 ATPases associated with a variety of cellular activities C1C91_20645 SM01321 C1C91_20645 C1C91_20680 SM00382 ATPases associated with a variety of cellular activities C1C91_20690 SM00843 C1C91_20690 C1C91_20695 SM00344 helix_turn_helix ASNC type C1C91_20700 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C1C91_20700 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C1C91_20715 SM00267 diguanylate cyclase C1C91_20715 SM00448 cheY-homologous receiver domain C1C91_20735 SM00316 Ribosomal protein S1-like RNA-binding domain C1C91_20740 SM00382 ATPases associated with a variety of cellular activities C1C91_20740 SM01086 C-terminal, D2-small domain, of ClpB protein C1C91_20750 SM00357 Cold shock protein domain C1C91_20755 SM00859 Semialdehyde dehydrogenase, NAD binding domain C1C91_20765 SM00873 B3/4 domain C1C91_20790 SM01126 C1C91_20790 C1C91_20795 SM00881 CoA binding domain C1C91_20810 SM00861 Transketolase, pyrimidine binding domain C1C91_20850 SM00825 Beta-ketoacyl synthase C1C91_20910 SM00342 helix_turn_helix, arabinose operon control protein C1C91_20920 SM00382 ATPases associated with a variety of cellular activities C1C91_20935 SM01007 Class II Aldolase and Adducin N-terminal domain C1C91_20960 SM00062 Bacterial periplasmic substrate-binding proteins C1C91_21040 SM00382 ATPases associated with a variety of cellular activities C1C91_21045 SM01126 C1C91_21045 C1C91_21065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_21065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_21085 SM00354 helix_turn _helix lactose operon repressor C1C91_21245 SM00893 Electron transfer flavoprotein domain C1C91_21250 SM00893 Electron transfer flavoprotein domain C1C91_21295 SM00382 ATPases associated with a variety of cellular activities C1C91_21325 SM00823 Phosphopantetheine attachment site C1C91_21370 SM00052 Putative diguanylate phosphodiesterase C1C91_21370 SM00267 diguanylate cyclase C1C91_21385 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_21385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_21385 SM01049 C1C91_21385 C1C91_21410 SM00387 Histidine kinase-like ATPases C1C91_21415 SM00493 C1C91_21415 C1C91_21465 SM01321 C1C91_21465 C1C91_21555 SM00382 ATPases associated with a variety of cellular activities C1C91_21570 SM00507 HNH nucleases C1C91_21695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_21695 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_21745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C1C91_21745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C1C91_21765 SM00487 DEAD-like helicases superfamily C1C91_21805 SM01005 Alanine racemase, C-terminal domain C1C91_21815 SM00382 ATPases associated with a variety of cellular activities C1C91_21820 SM00382 ATPases associated with a variety of cellular activities