locus-tag class description C1C91_00020 PF02384 N-6 DNA Methylase C1C91_00025 PF01914 MarC family integral membrane protein C1C91_00030 PF00171 Aldehyde dehydrogenase family C1C91_00030 PF00465 Iron-containing alcohol dehydrogenase C1C91_00040 PF06580 Histidine kinase C1C91_00040 PF07694 5TMR of 5TMR-LYT C1C91_00045 PF04397 LytTr DNA-binding domain C1C91_00045 PF00072 Response regulator receiver domain C1C91_00050 PF02384 N-6 DNA Methylase C1C91_00070 PF02554 Carbon starvation protein CstA C1C91_00080 PF12323 Helix-turn-helix domain C1C91_00080 PF01385 Probable transposase C1C91_00080 PF07282 Putative transposase DNA-binding domain C1C91_00095 PF11742 Protein of unknown function (DUF3302) C1C91_00100 PF00529 HlyD membrane-fusion protein of T1SS C1C91_00100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1C91_00105 PF04851 Type III restriction enzyme, res subunit C1C91_00105 PF00271 Helicase conserved C-terminal domain C1C91_00115 PF00462 Glutaredoxin C1C91_00125 PF00155 Aminotransferase class I and II C1C91_00130 PF03606 C4-dicarboxylate anaerobic carrier C1C91_00135 PF07055 Enoyl reductase FAD binding domain C1C91_00135 PF12241 Trans-2-enoyl-CoA reductase catalytic region C1C91_00135 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C1C91_00180 PF01609 Transposase DDE domain C1C91_00180 PF05598 Transposase domain (DUF772) C1C91_00185 PF01609 Transposase DDE domain C1C91_00185 PF13808 DDE_Tnp_1-associated C1C91_00195 PF02508 Rnf-Nqr subunit, membrane protein C1C91_00200 PF04060 Putative Fe-S cluster C1C91_00210 PF03116 NQR2, RnfD, RnfE family C1C91_00215 PF04205 FMN-binding domain C1C91_00225 PF00730 HhH-GPD superfamily base excision DNA repair protein C1C91_00225 PF00633 Helix-hairpin-helix motif C1C91_00225 PF10576 Iron-sulfur binding domain of endonuclease III C1C91_00230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1C91_00265 PF02535 ZIP Zinc transporter C1C91_00270 PF01048 Phosphorylase superfamily C1C91_00280 PF01497 Periplasmic binding protein C1C91_00290 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C1C91_00295 PF00483 Nucleotidyl transferase C1C91_00300 PF00591 Glycosyl transferase family, a/b domain C1C91_00300 PF02885 Glycosyl transferase family, helical bundle domain C1C91_00300 PF00117 Glutamine amidotransferase class-I C1C91_00305 PF00391 PEP-utilising enzyme, mobile domain C1C91_00305 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C1C91_00320 PF13439 Glycosyltransferase Family 4 C1C91_00320 PF00534 Glycosyl transferases group 1 C1C91_00325 PF00534 Glycosyl transferases group 1 C1C91_00325 PF13439 Glycosyltransferase Family 4 C1C91_00350 PF00534 Glycosyl transferases group 1 C1C91_00350 PF13439 Glycosyltransferase Family 4 C1C91_00355 PF03275 UDP-galactopyranose mutase C1C91_00365 PF00535 Glycosyl transferase family 2 C1C91_00380 PF00501 AMP-binding enzyme C1C91_00380 PF13193 AMP-binding enzyme C-terminal domain C1C91_00400 PF02348 Cytidylyltransferase C1C91_00410 PF03102 NeuB family C1C91_00410 PF08666 SAF domain C1C91_00425 PF09940 Domain of unknown function (DUF2172) C1C91_00425 PF16221 winged helix-turn-helix C1C91_00425 PF16254 Domain of unknown function (DUF4910) C1C91_00460 PF02561 Flagellar protein FliS C1C91_00465 PF07195 Flagellar hook-associated protein 2 C-terminus C1C91_00465 PF07196 Flagellin hook IN motif C1C91_00465 PF02465 Flagellar hook-associated protein 2 N-terminus C1C91_00475 PF00669 Bacterial flagellin N-terminal helical region C1C91_00475 PF00700 Bacterial flagellin C-terminal helical region C1C91_00480 PF00669 Bacterial flagellin N-terminal helical region C1C91_00480 PF07196 Flagellin hook IN motif C1C91_00480 PF00700 Bacterial flagellin C-terminal helical region C1C91_00485 PF03458 UPF0126 domain C1C91_00495 PF02568 Thiamine biosynthesis protein (ThiI) C1C91_00495 PF02926 THUMP domain C1C91_00505 PF00912 Transglycosylase C1C91_00505 PF06832 Penicillin-Binding Protein C-terminus Family C1C91_00505 PF00905 Penicillin binding protein transpeptidase domain C1C91_00510 PF07678 A-macroglobulin TED domain C1C91_00510 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain C1C91_00510 PF11974 Bacterial alpha-2-macroglobulin MG3 domain C1C91_00510 PF01835 MG2 domain C1C91_00510 PF17962 Bacterial macroglobulin domain 6 C1C91_00510 PF07703 Alpha-2-macroglobulin bait region domain C1C91_00510 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain C1C91_00510 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain C1C91_00510 PF00207 Alpha-2-macroglobulin family C1C91_00515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1C91_00515 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1C91_00520 PF00990 Diguanylate cyclase, GGDEF domain C1C91_00520 PF03707 Bacterial signalling protein N terminal repeat C1C91_00520 PF00563 EAL domain C1C91_00525 PF04055 Radical SAM superfamily C1C91_00535 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_00540 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_00545 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1C91_00550 PF00005 ABC transporter C1C91_00560 PF01979 Amidohydrolase family C1C91_00575 PF04336 Acyl carrier protein phosphodiesterase C1C91_00590 PF03960 ArsC family C1C91_00600 PF13181 Tetratricopeptide repeat C1C91_00600 PF01435 Peptidase family M48 C1C91_00605 PF01594 AI-2E family transporter C1C91_00615 PF00561 alpha/beta hydrolase fold C1C91_00620 PF03976 Polyphosphate kinase 2 (PPK2) C1C91_00625 PF08402 TOBE domain C1C91_00625 PF00005 ABC transporter C1C91_00630 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_00635 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_00635 PF14785 Maltose transport system permease protein MalF P2 domain C1C91_00640 PF01547 Bacterial extracellular solute-binding protein C1C91_00645 PF04245 37-kD nucleoid-associated bacterial protein C1C91_00650 PF07208 Protein of unknown function (DUF1414) C1C91_00655 PF00884 Sulfatase C1C91_00655 PF11893 Domain of unknown function (DUF3413) C1C91_00660 PF00593 TonB dependent receptor C1C91_00660 PF07715 TonB-dependent Receptor Plug Domain C1C91_00665 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C1C91_00665 PF00326 Prolyl oligopeptidase family C1C91_00685 PF03974 Ecotin C1C91_00690 PF04219 Protein of unknown function, DUF C1C91_00695 PF03466 LysR substrate binding domain C1C91_00695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_00705 PF00793 DAHP synthetase I family C1C91_00710 PF03009 Glycerophosphoryl diester phosphodiesterase family C1C91_00720 PF01266 FAD dependent oxidoreductase C1C91_00720 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C1C91_00725 PF00455 DeoR C terminal sensor domain C1C91_00725 PF08220 DeoR-like helix-turn-helix domain C1C91_00730 PF07690 Major Facilitator Superfamily C1C91_00735 PF00230 Major intrinsic protein C1C91_00740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C1C91_00740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C1C91_00745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_00745 PF03466 LysR substrate binding domain C1C91_00765 PF00248 Aldo/keto reductase family C1C91_00770 PF07690 Major Facilitator Superfamily C1C91_00780 PF02322 Cytochrome bd terminal oxidase subunit II C1C91_00785 PF01654 Cytochrome bd terminal oxidase subunit I C1C91_00800 PF04391 Protein of unknown function (DUF533) C1C91_00810 PF10689 Protein of unknown function (DUF2496) C1C91_00820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_00820 PF03466 LysR substrate binding domain C1C91_00840 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C1C91_00840 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C1C91_00850 PF07282 Putative transposase DNA-binding domain C1C91_00850 PF01385 Probable transposase C1C91_00850 PF12323 Helix-turn-helix domain C1C91_00875 PF00300 Histidine phosphatase superfamily (branch 1) C1C91_00880 PF00990 Diguanylate cyclase, GGDEF domain C1C91_00880 PF00563 EAL domain C1C91_00880 PF03707 Bacterial signalling protein N terminal repeat C1C91_00895 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C1C91_00895 PF17810 Arginine decarboxylase helical bundle domain C1C91_00895 PF17944 Arginine decarboxylase C-terminal helical extension C1C91_00910 PF07687 Peptidase dimerisation domain C1C91_00910 PF01546 Peptidase family M20/M25/M40 C1C91_00925 PF05221 S-adenosyl-L-homocysteine hydrolase C1C91_00925 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C1C91_00935 PF04264 YceI-like domain C1C91_00940 PF03466 LysR substrate binding domain C1C91_00940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_00950 PF01268 Formate--tetrahydrofolate ligase C1C91_00955 PF17200 Single Cache domain 2 C1C91_00955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_00955 PF00672 HAMP domain C1C91_00960 PF01227 GTP cyclohydrolase I C1C91_00965 PF03453 MoeA N-terminal region (domain I and II) C1C91_00965 PF00994 Probable molybdopterin binding domain C1C91_00965 PF03454 MoeA C-terminal region (domain IV) C1C91_00970 PF00899 ThiF family C1C91_00975 PF12697 Alpha/beta hydrolase family C1C91_00980 PF00005 ABC transporter C1C91_00980 PF03459 TOBE domain C1C91_00985 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_00995 PF02391 MoaE protein C1C91_01000 PF02597 ThiS family C1C91_01005 PF01967 MoaC family C1C91_01010 PF00994 Probable molybdopterin binding domain C1C91_01015 PF03264 NapC/NirT cytochrome c family, N-terminal region C1C91_01020 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) C1C91_01025 PF13237 4Fe-4S dicluster domain C1C91_01025 PF12801 4Fe-4S binding domain C1C91_01030 PF12838 4Fe-4S dicluster domain C1C91_01030 PF12800 4Fe-4S binding domain C1C91_01035 PF00384 Molybdopterin oxidoreductase C1C91_01035 PF01568 Molydopterin dinucleotide binding domain C1C91_01035 PF10518 TAT (twin-arginine translocation) pathway signal sequence C1C91_01035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C1C91_01045 PF00037 4Fe-4S binding domain C1C91_01045 PF12800 4Fe-4S binding domain C1C91_01045 PF13187 4Fe-4S dicluster domain C1C91_01050 PF04055 Radical SAM superfamily C1C91_01050 PF06463 Molybdenum Cofactor Synthesis C C1C91_01060 PF00196 Bacterial regulatory proteins, luxR family C1C91_01060 PF00072 Response regulator receiver domain C1C91_01075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_01075 PF00512 His Kinase A (phospho-acceptor) domain C1C91_01075 PF09456 RcsC Alpha-Beta-Loop (ABL) C1C91_01075 PF00072 Response regulator receiver domain C1C91_01085 PF01933 Uncharacterised protein family UPF0052 C1C91_01095 PF13230 Glutamine amidotransferases class-II C1C91_01100 PF13580 SIS domain C1C91_01105 PF09317 Domain of unknown function (DUF1974) C1C91_01105 PF02770 Acyl-CoA dehydrogenase, middle domain C1C91_01105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1C91_01105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1C91_01110 PF11849 Domain of unknown function (DUF3369) C1C91_01120 PF00929 Exonuclease C1C91_01125 PF00589 Phage integrase family C1C91_01125 PF02899 Phage integrase, N-terminal SAM-like domain C1C91_01130 PF00580 UvrD/REP helicase N-terminal domain C1C91_01130 PF13361 UvrD-like helicase C-terminal domain C1C91_01130 PF12462 DNA helicase IV / RNA helicase N terminal C1C91_01140 PF00665 Integrase core domain C1C91_01145 PF01695 IstB-like ATP binding protein C1C91_01175 PF05711 Macrocin-O-methyltransferase (TylF) C1C91_01180 PF08007 Cupin superfamily protein C1C91_01185 PF09722 Protein of unknown function (DUF2384) C1C91_01200 PF00816 H-NS histone family C1C91_01240 PF00075 RNase H C1C91_01245 PF08241 Methyltransferase domain C1C91_01250 PF00753 Metallo-beta-lactamase superfamily C1C91_01250 PF16123 Hydroxyacylglutathione hydrolase C-terminus C1C91_01255 PF01464 Transglycosylase SLT domain C1C91_01255 PF01476 LysM domain C1C91_01260 PF03372 Endonuclease/Exonuclease/phosphatase family C1C91_01270 PF03061 Thioesterase superfamily C1C91_01280 PF00356 Bacterial regulatory proteins, lacI family C1C91_01285 PF14718 Soluble lytic murein transglycosylase L domain C1C91_01285 PF01464 Transglycosylase SLT domain C1C91_01290 PF00990 Diguanylate cyclase, GGDEF domain C1C91_01290 PF00563 EAL domain C1C91_01290 PF03707 Bacterial signalling protein N terminal repeat C1C91_01295 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C1C91_01310 PF04357 TamB, inner membrane protein subunit of TAM complex C1C91_01335 PF02627 Carboxymuconolactone decarboxylase family C1C91_01340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1C91_01340 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1C91_01340 PF00403 Heavy-metal-associated domain C1C91_01345 PF13416 Bacterial extracellular solute-binding protein C1C91_01360 PF01066 CDP-alcohol phosphatidyltransferase C1C91_01365 PF13406 Transglycosylase SLT domain C1C91_01370 PF01047 MarR family C1C91_01380 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C1C91_01380 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C1C91_01380 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C1C91_01380 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C1C91_01385 PF03925 SeqA protein C-terminal domain C1C91_01385 PF17206 SeqA protein N-terminal domain C1C91_01390 PF12697 Alpha/beta hydrolase family C1C91_01400 PF01402 Ribbon-helix-helix protein, copG family C1C91_01405 PF00258 Flavodoxin C1C91_01415 PF01475 Ferric uptake regulator family C1C91_01420 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1C91_01420 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C1C91_01425 PF02838 Glycosyl hydrolase family 20, domain 2 C1C91_01425 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain C1C91_01425 PF03173 Putative carbohydrate binding domain C1C91_01425 PF00728 Glycosyl hydrolase family 20, catalytic domain C1C91_01430 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C1C91_01430 PF00367 phosphotransferase system, EIIB C1C91_01430 PF02378 Phosphotransferase system, EIIC C1C91_01435 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C1C91_01440 PF01979 Amidohydrolase family C1C91_01445 PF00480 ROK family C1C91_01445 PF01047 MarR family C1C91_01450 PF08019 Phosphoethanolamine transferase EptA/EptB C1C91_01450 PF00884 Sulfatase C1C91_01460 PF01709 Transcriptional regulator C1C91_01465 PF02938 GAD domain C1C91_01465 PF00152 tRNA synthetases class II (D, K and N) C1C91_01465 PF01336 OB-fold nucleic acid binding domain C1C91_01475 PF01904 Protein of unknown function DUF72 C1C91_01480 PF13649 Methyltransferase domain C1C91_01485 PF08003 Protein of unknown function (DUF1698) C1C91_01505 PF03466 LysR substrate binding domain C1C91_01505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_01510 PF00877 NlpC/P60 family C1C91_01520 PF00171 Aldehyde dehydrogenase family C1C91_01525 PF00440 Bacterial regulatory proteins, tetR family C1C91_01525 PF08359 YsiA-like protein, C-terminal region C1C91_01535 PF00465 Iron-containing alcohol dehydrogenase C1C91_01540 PF00291 Pyridoxal-phosphate dependent enzyme C1C91_01560 PF01554 MatE C1C91_01570 PF04325 Protein of unknown function (DUF465) C1C91_01575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1C91_01575 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C1C91_01575 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C1C91_01575 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C1C91_01575 PF10371 Domain of unknown function C1C91_01580 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1C91_01580 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C1C91_01580 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C1C91_01590 PF01435 Peptidase family M48 C1C91_01600 PF08241 Methyltransferase domain C1C91_01600 PF12697 Alpha/beta hydrolase family C1C91_01605 PF00155 Aminotransferase class I and II C1C91_01610 PF06968 Biotin and Thiamin Synthesis associated domain C1C91_01610 PF04055 Radical SAM superfamily C1C91_01615 PF00202 Aminotransferase class-III C1C91_01630 PF01336 OB-fold nucleic acid binding domain C1C91_01630 PF00152 tRNA synthetases class II (D, K and N) C1C91_01635 PF03605 Anaerobic c4-dicarboxylate membrane transporter C1C91_01645 PF01546 Peptidase family M20/M25/M40 C1C91_01645 PF07687 Peptidase dimerisation domain C1C91_01650 PF03606 C4-dicarboxylate anaerobic carrier C1C91_01660 PF03960 ArsC family C1C91_01665 PF07687 Peptidase dimerisation domain C1C91_01665 PF01546 Peptidase family M20/M25/M40 C1C91_01670 PF02557 D-alanyl-D-alanine carboxypeptidase C1C91_01680 PF02080 TrkA-C domain C1C91_01680 PF00999 Sodium/hydrogen exchanger family C1C91_01680 PF03471 Transporter associated domain C1C91_01690 PF01810 LysE type translocator C1C91_01695 PF12729 Four helix bundle sensory module for signal transduction C1C91_01695 PF00672 HAMP domain C1C91_01695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_01700 PF07509 Protein of unknown function (DUF1523) C1C91_01715 PF01156 Inosine-uridine preferring nucleoside hydrolase C1C91_01720 PF00849 RNA pseudouridylate synthase C1C91_01725 PF01048 Phosphorylase superfamily C1C91_01730 PF00465 Iron-containing alcohol dehydrogenase C1C91_01735 PF04355 SmpA / OmlA family C1C91_01740 PF13460 NAD(P)H-binding C1C91_01750 PF03364 Polyketide cyclase / dehydrase and lipid transport C1C91_01755 PF01668 SmpB protein C1C91_01765 PF13356 Arm DNA-binding domain C1C91_01765 PF00589 Phage integrase family C1C91_01780 PF09722 Protein of unknown function (DUF2384) C1C91_01810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_01810 PF00672 HAMP domain C1C91_01820 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C1C91_01825 PF00717 Peptidase S24-like C1C91_01830 PF00817 impB/mucB/samB family C1C91_01830 PF11799 impB/mucB/samB family C-terminal domain C1C91_01830 PF13438 Domain of unknown function (DUF4113) C1C91_01850 PF02146 Sir2 family C1C91_01875 PF01381 Helix-turn-helix C1C91_01890 PF00816 H-NS histone family C1C91_01900 PF05930 Prophage CP4-57 regulatory protein (AlpA) C1C91_01920 PF01081 KDPG and KHG aldolase C1C91_01935 PF13508 Acetyltransferase (GNAT) domain C1C91_01955 PF01546 Peptidase family M20/M25/M40 C1C91_01960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_01960 PF03466 LysR substrate binding domain C1C91_01965 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C1C91_01965 PF01243 Pyridoxamine 5'-phosphate oxidase C1C91_01980 PF01029 NusB family C1C91_01980 PF01189 16S rRNA methyltransferase RsmB/F C1C91_01985 PF00462 Glutaredoxin C1C91_01990 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C1C91_01990 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C1C91_01995 PF01609 Transposase DDE domain C1C91_01995 PF13006 Insertion element 4 transposase N-terminal C1C91_02000 PF04333 MlaA lipoprotein C1C91_02010 PF03918 Cytochrome C biogenesis protein C1C91_02015 PF08534 Redoxin C1C91_02020 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C1C91_02020 PF01578 Cytochrome C assembly protein C1C91_02025 PF03100 CcmE C1C91_02030 PF04995 Heme exporter protein D (CcmD) C1C91_02035 PF01578 Cytochrome C assembly protein C1C91_02040 PF03379 CcmB protein C1C91_02045 PF00005 ABC transporter C1C91_02055 PF01584 CheW-like domain C1C91_02065 PF13614 AAA domain C1C91_02070 PF00691 OmpA family C1C91_02070 PF13677 Membrane MotB of proton-channel complex MotA/MotB C1C91_02075 PF01618 MotA/TolQ/ExbB proton channel family C1C91_02080 PF00072 Response regulator receiver domain C1C91_02080 PF01339 CheB methylesterase C1C91_02085 PF00072 Response regulator receiver domain C1C91_02085 PF01627 Hpt domain C1C91_02085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_02085 PF02895 Signal transducing histidine kinase, homodimeric domain C1C91_02085 PF01584 CheW-like domain C1C91_02090 PF04344 Chemotaxis phosphatase, CheZ C1C91_02095 PF00072 Response regulator receiver domain C1C91_02100 PF04545 Sigma-70, region 4 C1C91_02100 PF04542 Sigma-70 region 2 C1C91_02100 PF04539 Sigma-70 region 3 C1C91_02105 PF10609 NUBPL iron-transfer P-loop NTPase C1C91_02110 PF00448 SRP54-type protein, GTPase domain C1C91_02115 PF00771 FHIPEP family C1C91_02120 PF01312 FlhB HrpN YscU SpaS Family C1C91_02125 PF01311 Bacterial export proteins, family 1 C1C91_02130 PF01313 Bacterial export proteins, family 3 C1C91_02135 PF00813 FliP family C1C91_02150 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C1C91_02150 PF02154 Flagellar motor switch protein FliM C1C91_02170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1C91_02170 PF18269 T3SS EscN ATPase C-terminal domain C1C91_02180 PF01706 FliG C-terminal domain C1C91_02180 PF14841 FliG middle domain C1C91_02180 PF14842 FliG N-terminal domain C1C91_02185 PF08345 Flagellar M-ring protein C-terminal C1C91_02185 PF01514 Secretory protein of YscJ/FliF family C1C91_02190 PF02049 Flagellar hook-basal body complex protein FliE C1C91_02200 PF03960 ArsC family C1C91_02205 PF01758 Sodium Bile acid symporter family C1C91_02215 PF00072 Response regulator receiver domain C1C91_02220 PF18693 TRAM domain C1C91_02220 PF04055 Radical SAM superfamily C1C91_02220 PF00919 Uncharacterized protein family UPF0004 C1C91_02225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1C91_02230 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_02235 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_02235 PF12911 N-terminal TM domain of oligopeptide transport permease C C1C91_02245 PF00005 ABC transporter C1C91_02245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1C91_02255 PF01869 BadF/BadG/BcrA/BcrD ATPase family C1C91_02260 PF00728 Glycosyl hydrolase family 20, catalytic domain C1C91_02260 PF02838 Glycosyl hydrolase family 20, domain 2 C1C91_02265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_02265 PF08447 PAS fold C1C91_02275 PF08272 Topoisomerase I zinc-ribbon-like C1C91_02275 PF01396 Topoisomerase DNA binding C4 zinc finger C1C91_02275 PF01131 DNA topoisomerase C1C91_02275 PF01751 Toprim domain C1C91_02280 PF04996 Succinylarginine dihydrolase C1C91_02285 PF01343 Peptidase family S49 C1C91_02285 PF08496 Peptidase family S49 N-terminal C1C91_02290 PF00106 short chain dehydrogenase C1C91_02295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_02295 PF03466 LysR substrate binding domain C1C91_02300 PF07690 Major Facilitator Superfamily C1C91_02305 PF00155 Aminotransferase class I and II C1C91_02315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_02315 PF03466 LysR substrate binding domain C1C91_02325 PF01161 Phosphatidylethanolamine-binding protein C1C91_02335 PF01204 Trehalase C1C91_02340 PF00579 tRNA synthetases class I (W and Y) C1C91_02345 PF01551 Peptidase family M23 C1C91_02345 PF08525 Opacity-associated protein A N-terminal motif C1C91_02345 PF01476 LysM domain C1C91_02365 PF00456 Transketolase, thiamine diphosphate binding domain C1C91_02365 PF02779 Transketolase, pyrimidine binding domain C1C91_02365 PF02780 Transketolase, C-terminal domain C1C91_02370 PF02773 S-adenosylmethionine synthetase, C-terminal domain C1C91_02370 PF02772 S-adenosylmethionine synthetase, central domain C1C91_02370 PF00438 S-adenosylmethionine synthetase, N-terminal domain C1C91_02375 PF10263 SprT-like family C1C91_02375 PF17283 SprT-like zinc ribbon domain C1C91_02380 PF04231 Endonuclease I C1C91_02385 PF04452 RNA methyltransferase C1C91_02390 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C1C91_02390 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C1C91_02395 PF02622 Uncharacterized ACR, COG1678 C1C91_02400 PF03652 Holliday junction resolvase C1C91_02410 PF07690 Major Facilitator Superfamily C1C91_02425 PF00144 Beta-lactamase C1C91_02430 PF01235 Sodium:alanine symporter family C1C91_02435 PF00923 Transaldolase/Fructose-6-phosphate aldolase C1C91_02450 PF03167 Uracil DNA glycosylase superfamily C1C91_02455 PF01228 Glycine radical C1C91_02460 PF00375 Sodium:dicarboxylate symporter family C1C91_02465 PF00793 DAHP synthetase I family C1C91_02470 PF13369 Transglutaminase-like superfamily C1C91_02480 PF13847 Methyltransferase domain C1C91_02480 PF17827 PrmC N-terminal domain C1C91_02485 PF00472 RF-1 domain C1C91_02485 PF03462 PCRF domain C1C91_02490 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C1C91_02490 PF01488 Shikimate / quinate 5-dehydrogenase C1C91_02490 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C1C91_02495 PF03550 Outer membrane lipoprotein LolB C1C91_02500 PF08544 GHMP kinases C terminal C1C91_02500 PF00288 GHMP kinases N terminal domain C1C91_02510 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C1C91_02510 PF14572 Phosphoribosyl synthetase-associated domain C1C91_02515 PF01195 Peptidyl-tRNA hydrolase C1C91_02520 PF01926 50S ribosome-binding GTPase C1C91_02520 PF06071 Protein of unknown function (DUF933) C1C91_02565 PF02080 TrkA-C domain C1C91_02565 PF03600 Citrate transporter C1C91_02575 PF07859 alpha/beta hydrolase fold C1C91_02585 PF07690 Major Facilitator Superfamily C1C91_02590 PF13419 Haloacid dehalogenase-like hydrolase C1C91_02605 PF00171 Aldehyde dehydrogenase family C1C91_02610 PF04958 Arginine N-succinyltransferase beta subunit C1C91_02615 PF00202 Aminotransferase class-III C1C91_02620 PF00117 Glutamine amidotransferase class-I C1C91_02630 PF00579 tRNA synthetases class I (W and Y) C1C91_02635 PF13419 Haloacid dehalogenase-like hydrolase C1C91_02640 PF00834 Ribulose-phosphate 3 epimerase family C1C91_02645 PF02086 D12 class N6 adenine-specific DNA methyltransferase C1C91_02650 PF05036 Sporulation related domain C1C91_02655 PF01761 3-dehydroquinate synthase C1C91_02660 PF01202 Shikimate kinase C1C91_02665 PF00263 Bacterial type II and III secretion system protein C1C91_02665 PF07660 Secretin and TonB N terminus short domain C1C91_02665 PF03958 Bacterial type II/III secretion system short domain C1C91_02665 PF11741 AMIN domain C1C91_02690 PF00905 Penicillin binding protein transpeptidase domain C1C91_02690 PF00912 Transglycosylase C1C91_02690 PF17092 Penicillin-binding protein OB-like domain C1C91_02695 PF03466 LysR substrate binding domain C1C91_02695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_02710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_02710 PF03466 LysR substrate binding domain C1C91_02735 PF00924 Mechanosensitive ion channel C1C91_02735 PF12795 Mechanosensitive ion channel porin domain C1C91_02735 PF12794 Mechanosensitive ion channel inner membrane domain 1 C1C91_02740 PF03009 Glycerophosphoryl diester phosphodiesterase family C1C91_02745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_02745 PF00672 HAMP domain C1C91_02745 PF02743 Cache domain C1C91_02750 PF00890 FAD binding domain C1C91_02750 PF02910 Fumarate reductase flavoprotein C-term C1C91_02755 PF13183 4Fe-4S dicluster domain C1C91_02755 PF13085 2Fe-2S iron-sulfur cluster binding domain C1C91_02760 PF02300 Fumarate reductase subunit C C1C91_02765 PF02313 Fumarate reductase subunit D C1C91_02780 PF06224 Winged helix DNA-binding domain C1C91_02785 PF13847 Methyltransferase domain C1C91_02795 PF00501 AMP-binding enzyme C1C91_02805 PF00106 short chain dehydrogenase C1C91_02815 PF00486 Transcriptional regulatory protein, C terminal C1C91_02815 PF00072 Response regulator receiver domain C1C91_02820 PF00512 His Kinase A (phospho-acceptor) domain C1C91_02820 PF08521 Two-component sensor kinase N-terminal C1C91_02820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_02825 PF08443 RimK-like ATP-grasp domain C1C91_02825 PF18030 RimK PreATP-grasp domain C1C91_02830 PF00478 IMP dehydrogenase / GMP reductase domain C1C91_02840 PF08207 Elongation factor P (EF-P) KOW-like domain C1C91_02840 PF01132 Elongation factor P (EF-P) OB domain C1C91_02840 PF09285 Elongation factor P, C-terminal C1C91_02845 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_02850 PF09383 NIL domain C1C91_02850 PF00005 ABC transporter C1C91_02855 PF03180 NLPA lipoprotein C1C91_02860 PF03171 2OG-Fe(II) oxygenase superfamily C1C91_02860 PF14226 non-haem dioxygenase in morphine synthesis N-terminal C1C91_02870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1C91_02870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1C91_02895 PF13419 Haloacid dehalogenase-like hydrolase C1C91_02925 PF01494 FAD binding domain C1C91_02930 PF04055 Radical SAM superfamily C1C91_02930 PF00919 Uncharacterized protein family UPF0004 C1C91_02930 PF01938 TRAM domain C1C91_02935 PF02562 PhoH-like protein C1C91_02940 PF02130 Uncharacterized protein family UPF0054 C1C91_02945 PF00571 CBS domain C1C91_02945 PF03471 Transporter associated domain C1C91_02950 PF00795 Carbon-nitrogen hydrolase C1C91_02955 PF07295 Zinc-ribbon containing domain C1C91_02960 PF00133 tRNA synthetases class I (I, L, M and V) C1C91_02960 PF13603 Leucyl-tRNA synthetase, Domain 2 C1C91_02960 PF08264 Anticodon-binding domain of tRNA C1C91_02975 PF01467 Cytidylyltransferase-like C1C91_02985 PF02590 Predicted SPOUT methyltransferase C1C91_02990 PF03717 Penicillin-binding Protein dimerisation domain C1C91_02990 PF00905 Penicillin binding protein transpeptidase domain C1C91_02995 PF01098 Cell cycle protein C1C91_03000 PF13406 Transglycosylase SLT domain C1C91_03005 PF05036 Sporulation related domain C1C91_03005 PF03330 Lytic transglycolase C1C91_03010 PF07943 Penicillin-binding protein 5, C-terminal domain C1C91_03010 PF00768 D-alanyl-D-alanine carboxypeptidase C1C91_03015 PF04359 Protein of unknown function (DUF493) C1C91_03020 PF03099 Biotin/lipoate A/B protein ligase family C1C91_03030 PF04055 Radical SAM superfamily C1C91_03030 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C1C91_03040 PF02508 Rnf-Nqr subunit, membrane protein C1C91_03055 PF13411 MerR HTH family regulatory protein C1C91_03060 PF02272 DHHA1 domain C1C91_03060 PF01368 DHH family C1C91_03060 PF17768 RecJ OB domain C1C91_03080 PF01741 Large-conductance mechanosensitive channel, MscL C1C91_03085 PF00589 Phage integrase family C1C91_03085 PF02899 Phage integrase, N-terminal SAM-like domain C1C91_03090 PF00258 Flavodoxin C1C91_03095 PF01523 Putative modulator of DNA gyrase C1C91_03105 PF01523 Putative modulator of DNA gyrase C1C91_03115 PF17969 L,D-transpeptidase C-terminal domain C1C91_03115 PF03734 L,D-transpeptidase catalytic domain C1C91_03125 PF12838 4Fe-4S dicluster domain C1C91_03140 PF06476 Protein of unknown function (DUF1090) C1C91_03145 PF02635 DsrE/DsrF-like family C1C91_03150 PF07690 Major Facilitator Superfamily C1C91_03155 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C1C91_03155 PF00575 S1 RNA binding domain C1C91_03155 PF01138 3' exoribonuclease family, domain 1 C1C91_03155 PF03725 3' exoribonuclease family, domain 2 C1C91_03155 PF00013 KH domain C1C91_03160 PF00312 Ribosomal protein S15 C1C91_03165 PF16198 tRNA pseudouridylate synthase B C-terminal domain C1C91_03165 PF01509 TruB family pseudouridylate synthase (N terminal domain) C1C91_03165 PF09157 Pseudouridine synthase II TruB, C-terminal C1C91_03170 PF02033 Ribosome-binding factor A C1C91_03175 PF00009 Elongation factor Tu GTP binding domain C1C91_03175 PF08364 Bacterial translation initiation factor IF-2 associated region C1C91_03175 PF04760 Translation initiation factor IF-2, N-terminal region C1C91_03175 PF11987 Translation-initiation factor 2 C1C91_03180 PF13184 NusA-like KH domain C1C91_03180 PF00575 S1 RNA binding domain C1C91_03180 PF08529 NusA N-terminal domain C1C91_03185 PF17384 RimP C-terminal SH3 domain C1C91_03185 PF02576 RimP N-terminal domain C1C91_03200 PF03840 Preprotein translocase SecG subunit C1C91_03205 PF00121 Triosephosphate isomerase C1C91_03210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C1C91_03210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C1C91_03210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C1C91_03210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C1C91_03215 PF00809 Pterin binding enzyme C1C91_03220 PF00004 ATPase family associated with various cellular activities (AAA) C1C91_03220 PF01434 Peptidase family M41 C1C91_03220 PF06480 FtsH Extracellular C1C91_03220 PF17862 AAA+ lid domain C1C91_03225 PF01728 FtsJ-like methyltransferase C1C91_03230 PF01985 CRS1 / YhbY (CRM) domain C1C91_03240 PF01272 Transcription elongation factor, GreA/GreB, C-term C1C91_03240 PF03449 Transcription elongation factor, N-terminal C1C91_03245 PF00691 OmpA family C1C91_03245 PF13677 Membrane MotB of proton-channel complex MotA/MotB C1C91_03250 PF01618 MotA/TolQ/ExbB proton channel family C1C91_03255 PF02609 Exonuclease VII small subunit C1C91_03260 PF00348 Polyprenyl synthetase C1C91_03265 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C1C91_03265 PF02780 Transketolase, C-terminal domain C1C91_03265 PF02779 Transketolase, pyrimidine binding domain C1C91_03280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1C91_03285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1C91_03285 PF00005 ABC transporter C1C91_03290 PF04608 Phosphatidylglycerophosphatase A C1C91_03295 PF02769 AIR synthase related protein, C-terminal domain C1C91_03295 PF00586 AIR synthase related protein, N-terminal domain C1C91_03300 PF01029 NusB family C1C91_03305 PF00885 6,7-dimethyl-8-ribityllumazine synthase C1C91_03310 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C1C91_03310 PF00925 GTP cyclohydrolase II C1C91_03315 PF00677 Lumazine binding domain C1C91_03320 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C1C91_03320 PF01872 RibD C-terminal domain C1C91_03325 PF03477 ATP cone domain C1C91_03335 PF00464 Serine hydroxymethyltransferase C1C91_03350 PF02613 Nitrate reductase delta subunit C1C91_03360 PF03707 Bacterial signalling protein N terminal repeat C1C91_03360 PF00563 EAL domain C1C91_03360 PF00990 Diguanylate cyclase, GGDEF domain C1C91_03365 PF00501 AMP-binding enzyme C1C91_03365 PF16177 Acetyl-coenzyme A synthetase N-terminus C1C91_03365 PF13193 AMP-binding enzyme C-terminal domain C1C91_03370 PF01220 Dehydroquinase class II C1C91_03375 PF00364 Biotin-requiring enzyme C1C91_03380 PF02785 Biotin carboxylase C-terminal domain C1C91_03380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1C91_03380 PF00289 Biotin carboxylase, N-terminal domain C1C91_03385 PF06196 Protein of unknown function (DUF997) C1C91_03390 PF00474 Sodium:solute symporter family C1C91_03395 PF02378 Phosphotransferase system, EIIC C1C91_03395 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C1C91_03395 PF00367 phosphotransferase system, EIIB C1C91_03400 PF03466 LysR substrate binding domain C1C91_03400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_03405 PF00107 Zinc-binding dehydrogenase C1C91_03405 PF08240 Alcohol dehydrogenase GroES-like domain C1C91_03415 PF00132 Bacterial transferase hexapeptide (six repeats) C1C91_03415 PF12464 Maltose acetyltransferase C1C91_03420 PF00672 HAMP domain C1C91_03420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_03420 PF02743 Cache domain C1C91_03430 PF00881 Nitroreductase family C1C91_03440 PF01343 Peptidase family S49 C1C91_03460 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C1C91_03460 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1C91_03465 PF07023 Protein of unknown function (DUF1315) C1C91_03470 PF17763 Glutaminase/Asparaginase C-terminal domain C1C91_03470 PF00710 Asparaginase, N-terminal C1C91_03475 PF03616 Sodium/glutamate symporter C1C91_03500 PF00152 tRNA synthetases class II (D, K and N) C1C91_03500 PF01336 OB-fold nucleic acid binding domain C1C91_03505 PF02567 Phenazine biosynthesis-like protein C1C91_03510 PF00175 Oxidoreductase NAD-binding domain C1C91_03510 PF00667 FAD binding domain C1C91_03510 PF00258 Flavodoxin C1C91_03515 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C1C91_03515 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C1C91_03520 PF01507 Phosphoadenosine phosphosulfate reductase family C1C91_03525 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C1C91_03530 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_03535 PF00571 CBS domain C1C91_03535 PF00005 ABC transporter C1C91_03540 PF00186 Dihydrofolate reductase C1C91_03545 PF12821 Threonine/Serine exporter, ThrE C1C91_03550 PF06738 Putative threonine/serine exporter C1C91_03560 PF00994 Probable molybdopterin binding domain C1C91_03575 PF00194 Eukaryotic-type carbonic anhydrase C1C91_03580 PF04227 Indigoidine synthase A like protein C1C91_03585 PF00294 pfkB family carbohydrate kinase C1C91_03590 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C1C91_03590 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1C91_03590 PF04324 BFD-like [2Fe-2S] binding domain C1C91_03590 PF13806 Rieske-like [2Fe-2S] domain C1C91_03590 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C1C91_03590 PF18267 Rubredoxin NAD+ reductase C-terminal domain C1C91_03600 PF00005 ABC transporter C1C91_03605 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_03610 PF00005 ABC transporter C1C91_03620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1C91_03620 PF10414 Sirohaem synthase dimerisation region C1C91_03620 PF14824 Sirohaem biosynthesis protein central C1C91_03625 PF00384 Molybdopterin oxidoreductase C1C91_03625 PF04324 BFD-like [2Fe-2S] binding domain C1C91_03625 PF01568 Molydopterin dinucleotide binding domain C1C91_03625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C1C91_03640 PF00582 Universal stress protein family C1C91_03650 PF00171 Aldehyde dehydrogenase family C1C91_03655 PF00696 Amino acid kinase family C1C91_03655 PF01472 PUA domain C1C91_03660 PF07417 Sigma factor-binding transcriptional regulator Crl C1C91_03670 PF02384 N-6 DNA Methylase C1C91_03695 PF00156 Phosphoribosyl transferase domain C1C91_03705 PF01546 Peptidase family M20/M25/M40 C1C91_03705 PF07687 Peptidase dimerisation domain C1C91_03715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1C91_03715 PF00005 ABC transporter C1C91_03720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1C91_03720 PF00005 ABC transporter C1C91_03725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1C91_03730 PF12911 N-terminal TM domain of oligopeptide transport permease C C1C91_03730 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_03735 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_03740 PF00593 TonB dependent receptor C1C91_03740 PF07715 TonB-dependent Receptor Plug Domain C1C91_03750 PF01618 MotA/TolQ/ExbB proton channel family C1C91_03755 PF01618 MotA/TolQ/ExbB proton channel family C1C91_03760 PF02472 Biopolymer transport protein ExbD/TolR C1C91_03825 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1C91_03830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_03830 PF00672 HAMP domain C1C91_03840 PF00313 'Cold-shock' DNA-binding domain C1C91_03880 PF00929 Exonuclease C1C91_03885 PF03193 RsgA GTPase C1C91_03890 PF02666 Phosphatidylserine decarboxylase C1C91_03895 PF09905 DNA-binding protein VF530 C1C91_03915 PF03707 Bacterial signalling protein N terminal repeat C1C91_03915 PF00990 Diguanylate cyclase, GGDEF domain C1C91_03915 PF00563 EAL domain C1C91_03920 PF06877 Regulator of ribonuclease activity B C1C91_03940 PF00561 alpha/beta hydrolase fold C1C91_03945 PF00664 ABC transporter transmembrane region C1C91_03945 PF00005 ABC transporter C1C91_03950 PF06004 Bacterial protein of unknown function (DUF903) C1C91_03960 PF04960 Glutaminase C1C91_03965 PF04320 Protein with unknown function (DUF469) C1C91_03970 PF02390 Putative methyltransferase C1C91_03975 PF01483 Proprotein convertase P-domain C1C91_03975 PF04389 Peptidase family M28 C1C91_03980 PF00155 Aminotransferase class I and II C1C91_03985 PF00563 EAL domain C1C91_03985 PF12792 CSS motif domain associated with EAL C1C91_03990 PF01370 NAD dependent epimerase/dehydratase family C1C91_03990 PF08338 Domain of unknown function (DUF1731) C1C91_04000 PF00005 ABC transporter C1C91_04005 PF13472 GDSL-like Lipase/Acylhydrolase family C1C91_04010 PF01584 CheW-like domain C1C91_04010 PF00072 Response regulator receiver domain C1C91_04015 PF00267 Gram-negative porin C1C91_04020 PF01385 Probable transposase C1C91_04020 PF07282 Putative transposase DNA-binding domain C1C91_04020 PF12323 Helix-turn-helix domain C1C91_04030 PF00571 CBS domain C1C91_04030 PF00478 IMP dehydrogenase / GMP reductase domain C1C91_04035 PF12848 ABC transporter C1C91_04035 PF00005 ABC transporter C1C91_04050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_04050 PF03466 LysR substrate binding domain C1C91_04055 PF02525 Flavodoxin-like fold C1C91_04075 PF13592 Winged helix-turn helix C1C91_04075 PF13358 DDE superfamily endonuclease C1C91_04085 PF13358 DDE superfamily endonuclease C1C91_04085 PF13592 Winged helix-turn helix C1C91_04090 PF13411 MerR HTH family regulatory protein C1C91_04100 PF00474 Sodium:solute symporter family C1C91_04105 PF17969 L,D-transpeptidase C-terminal domain C1C91_04105 PF03734 L,D-transpeptidase catalytic domain C1C91_04110 PF00924 Mechanosensitive ion channel C1C91_04115 PF00871 Acetokinase family C1C91_04120 PF04074 YhcH/YjgK/YiaL C1C91_04135 PF13302 Acetyltransferase (GNAT) domain C1C91_04145 PF01695 IstB-like ATP binding protein C1C91_04150 PF00665 Integrase core domain C1C91_04160 PF03466 LysR substrate binding domain C1C91_04160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_04180 PF02080 TrkA-C domain C1C91_04180 PF06826 Predicted Permease Membrane Region C1C91_04185 PF03006 Haemolysin-III related C1C91_04190 PF00282 Pyridoxal-dependent decarboxylase conserved domain C1C91_04195 PF04279 Intracellular septation protein A C1C91_04200 PF03795 YCII-related domain C1C91_04205 PF00459 Inositol monophosphatase family C1C91_04220 PF00483 Nucleotidyl transferase C1C91_04225 PF00854 POT family C1C91_04270 PF01207 Dihydrouridine synthase (Dus) C1C91_04275 PF02954 Bacterial regulatory protein, Fis family C1C91_04280 PF01810 LysE type translocator C1C91_04305 PF03060 Nitronate monooxygenase C1C91_04310 PF00445 Ribonuclease T2 family C1C91_04330 PF00512 His Kinase A (phospho-acceptor) domain C1C91_04330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_04330 PF00672 HAMP domain C1C91_04330 PF16527 Two-component sensor protein CpxA, periplasmic domain C1C91_04335 PF00072 Response regulator receiver domain C1C91_04335 PF00486 Transcriptional regulatory protein, C terminal C1C91_04340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1C91_04345 PF00005 ABC transporter C1C91_04345 PF02687 FtsX-like permease family C1C91_04345 PF12704 MacB-like periplasmic core domain C1C91_04355 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase C1C91_04375 PF03783 Curli production assembly/transport component CsgG C1C91_04385 PF05643 Putative bacterial lipoprotein (DUF799) C1C91_04390 PF00990 Diguanylate cyclase, GGDEF domain C1C91_04395 PF00271 Helicase conserved C-terminal domain C1C91_04395 PF00270 DEAD/DEAH box helicase C1C91_04400 PF00111 2Fe-2S iron-sulfur cluster binding domain C1C91_04400 PF00970 Oxidoreductase FAD-binding domain C1C91_04400 PF00175 Oxidoreductase NAD-binding domain C1C91_04405 PF12833 Helix-turn-helix domain C1C91_04405 PF02311 AraC-like ligand binding domain C1C91_04425 PF00753 Metallo-beta-lactamase superfamily C1C91_04430 PF01425 Amidase C1C91_04435 PF04371 Porphyromonas-type peptidyl-arginine deiminase C1C91_04440 PF03466 LysR substrate binding domain C1C91_04440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_04450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1C91_04455 PF00583 Acetyltransferase (GNAT) family C1C91_04460 PF01758 Sodium Bile acid symporter family C1C91_04470 PF00009 Elongation factor Tu GTP binding domain C1C91_04470 PF03144 Elongation factor Tu domain 2 C1C91_04470 PF16658 Class II release factor RF3, C-terminal domain C1C91_04475 PF00072 Response regulator receiver domain C1C91_04475 PF00990 Diguanylate cyclase, GGDEF domain C1C91_04480 PF00563 EAL domain C1C91_04480 PF00990 Diguanylate cyclase, GGDEF domain C1C91_04480 PF08448 PAS fold C1C91_04485 PF05762 VWA domain containing CoxE-like protein C1C91_04500 PF00583 Acetyltransferase (GNAT) family C1C91_04510 PF00501 AMP-binding enzyme C1C91_04520 PF01177 Asp/Glu/Hydantoin racemase C1C91_04535 PF00155 Aminotransferase class I and II C1C91_04535 PF00392 Bacterial regulatory proteins, gntR family C1C91_04550 PF00209 Sodium:neurotransmitter symporter family C1C91_04555 PF00209 Sodium:neurotransmitter symporter family C1C91_04575 PF07690 Major Facilitator Superfamily C1C91_04585 PF01037 Lrp/AsnC ligand binding domain C1C91_04600 PF01047 MarR family C1C91_04605 PF16884 N-terminal domain of oxidoreductase C1C91_04605 PF00107 Zinc-binding dehydrogenase C1C91_04610 PF00293 NUDIX domain C1C91_04625 PF01641 SelR domain C1C91_04630 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C1C91_04630 PF00128 Alpha amylase, catalytic domain C1C91_04635 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C1C91_04635 PF02806 Alpha amylase, C-terminal all-beta domain C1C91_04635 PF00128 Alpha amylase, catalytic domain C1C91_04640 PF02446 4-alpha-glucanotransferase C1C91_04645 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C1C91_04645 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1C91_04650 PF01263 Aldose 1-epimerase C1C91_04655 PF02445 Quinolinate synthetase A protein C1C91_04660 PF00672 HAMP domain C1C91_04660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_04735 PF13174 Tetratricopeptide repeat C1C91_04735 PF16331 TolA binding protein trimerisation C1C91_04740 PF00691 OmpA family C1C91_04745 PF04052 TolB amino-terminal domain C1C91_04745 PF07676 WD40-like Beta Propeller Repeat C1C91_04755 PF02472 Biopolymer transport protein ExbD/TolR C1C91_04760 PF01618 MotA/TolQ/ExbB proton channel family C1C91_04765 PF03061 Thioesterase superfamily C1C91_04770 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) C1C91_04775 PF08173 Membrane bound YbgT-like protein C1C91_04780 PF02322 Cytochrome bd terminal oxidase subunit II C1C91_04785 PF01654 Cytochrome bd terminal oxidase subunit I C1C91_04795 PF05496 Holliday junction DNA helicase RuvB P-loop domain C1C91_04795 PF17864 RuvB AAA lid domain C1C91_04795 PF05491 RuvB C-terminal winged helix domain C1C91_04800 PF07499 RuvA, C-terminal domain C1C91_04800 PF01330 RuvA N terminal domain C1C91_04805 PF00672 HAMP domain C1C91_04805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_04810 PF03129 Anticodon binding domain C1C91_04810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1C91_04810 PF04073 Aminoacyl-tRNA editing domain C1C91_04820 PF00106 short chain dehydrogenase C1C91_04835 PF00378 Enoyl-CoA hydratase/isomerase C1C91_04840 PF10952 Protein of unknown function (DUF2753) C1C91_04850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1C91_04860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_04860 PF08447 PAS fold C1C91_04865 PF00271 Helicase conserved C-terminal domain C1C91_04865 PF00270 DEAD/DEAH box helicase C1C91_04870 PF08534 Redoxin C1C91_04875 PF00403 Heavy-metal-associated domain C1C91_04880 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C1C91_04880 PF17967 Pullulanase N2 domain C1C91_04880 PF18494 Pullulanase Ins domain C1C91_04880 PF03714 Bacterial pullanase-associated domain C1C91_04880 PF11852 Domain of unknown function (DUF3372) C1C91_04895 PF02583 Metal-sensitive transcriptional repressor C1C91_04900 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) C1C91_04905 PF01270 Glycosyl hydrolases family 8 C1C91_04910 PF03170 Bacterial cellulose synthase subunit C1C91_04915 PF00535 Glycosyl transferase family 2 C1C91_04915 PF07238 PilZ domain C1C91_04920 PF06564 Cellulose biosynthesis protein BcsQ C1C91_04935 PF00155 Aminotransferase class I and II C1C91_04940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_04940 PF03466 LysR substrate binding domain C1C91_04950 PF04055 Radical SAM superfamily C1C91_04955 PF11230 Protein of unknown function (DUF3029) C1C91_04995 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading C1C91_04995 PF18416 N-acetylglucosamine binding protein domain 2 C1C91_05000 PF03466 LysR substrate binding domain C1C91_05000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_05005 PF12857 TOBE-like domain C1C91_05005 PF00005 ABC transporter C1C91_05010 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_05015 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_05055 PF18337 RapA N-terminal Tudor like domain C1C91_05055 PF18339 RapA N-terminal Tudor like domain 1 C1C91_05055 PF00176 SNF2 family N-terminal domain C1C91_05055 PF12137 RNA polymerase recycling family C-terminal C1C91_05055 PF00271 Helicase conserved C-terminal domain C1C91_05060 PF00849 RNA pseudouridylate synthase C1C91_05070 PF03707 Bacterial signalling protein N terminal repeat C1C91_05070 PF00563 EAL domain C1C91_05070 PF00990 Diguanylate cyclase, GGDEF domain C1C91_05080 PF00118 TCP-1/cpn60 chaperonin family C1C91_05085 PF00166 Chaperonin 10 Kd subunit C1C91_05090 PF01554 MatE C1C91_05095 PF04186 FxsA cytoplasmic membrane protein C1C91_05100 PF00206 Lyase C1C91_05100 PF10415 Fumarase C C-terminus C1C91_05105 PF03605 Anaerobic c4-dicarboxylate membrane transporter C1C91_05110 PF04262 Glutamate-cysteine ligase C1C91_05115 PF00675 Insulinase (Peptidase family M16) C1C91_05115 PF05193 Peptidase M16 inactive domain C1C91_05120 PF09335 SNARE associated Golgi protein C1C91_05135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1C91_05160 PF03948 Ribosomal protein L9, C-terminal domain C1C91_05160 PF01281 Ribosomal protein L9, N-terminal domain C1C91_05165 PF01084 Ribosomal protein S18 C1C91_05170 PF01250 Ribosomal protein S6 C1C91_05175 PF01566 Natural resistance-associated macrophage protein C1C91_05180 PF02272 DHHA1 domain C1C91_05180 PF01411 tRNA synthetases class II (A) C1C91_05180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1C91_05185 PF13673 Acetyltransferase (GNAT) domain C1C91_05195 PF08032 RNA 2'-O ribose methyltransferase substrate binding C1C91_05195 PF00588 SpoU rRNA Methylase family C1C91_05200 PF00773 RNB domain C1C91_05200 PF00575 S1 RNA binding domain C1C91_05200 PF08206 Ribonuclease B OB domain C1C91_05200 PF08461 Ribonuclease R winged-helix domain C1C91_05200 PF17876 Cold shock domain C1C91_05205 PF00990 Diguanylate cyclase, GGDEF domain C1C91_05210 PF02664 S-Ribosylhomocysteinase (LuxS) C1C91_05220 PF00543 Nitrogen regulatory protein P-II C1C91_05225 PF00795 Carbon-nitrogen hydrolase C1C91_05225 PF02540 NAD synthase C1C91_05260 PF07963 Prokaryotic N-terminal methylation motif C1C91_05260 PF14245 Type IV pilin PilA C1C91_05265 PF02401 LytB protein C1C91_05270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1C91_05275 PF01252 Signal peptidase (SPase) II C1C91_05280 PF00133 tRNA synthetases class I (I, L, M and V) C1C91_05280 PF08264 Anticodon-binding domain of tRNA C1C91_05280 PF06827 Zinc finger found in FPG and IleRS C1C91_05285 PF01687 Riboflavin kinase C1C91_05285 PF06574 FAD synthetase C1C91_05290 PF03023 Lipid II flippase MurJ C1C91_05295 PF01649 Ribosomal protein S20 C1C91_05300 PF01022 Bacterial regulatory protein, arsR family C1C91_05305 PF03466 LysR substrate binding domain C1C91_05305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_05315 PF06965 Na+/H+ antiporter 1 C1C91_05320 PF00303 Thymidylate synthase C1C91_05325 PF01790 Prolipoprotein diacylglyceryl transferase C1C91_05330 PF01590 GAF domain C1C91_05330 PF05524 PEP-utilising enzyme, N-terminal C1C91_05330 PF00391 PEP-utilising enzyme, mobile domain C1C91_05330 PF02896 PEP-utilising enzyme, TIM barrel domain C1C91_05335 PF00293 NUDIX domain C1C91_05340 PF02976 DNA mismatch repair enzyme MutH C1C91_05350 PF01245 Ribosomal protein L19 C1C91_05355 PF01746 tRNA (Guanine-1)-methyltransferase C1C91_05360 PF01782 RimM N-terminal domain C1C91_05360 PF05239 PRC-barrel domain C1C91_05365 PF00886 Ribosomal protein S16 C1C91_05370 PF01609 Transposase DDE domain C1C91_05370 PF13006 Insertion element 4 transposase N-terminal C1C91_05375 PF00448 SRP54-type protein, GTPase domain C1C91_05375 PF02881 SRP54-type protein, helical bundle domain C1C91_05375 PF02978 Signal peptide binding domain C1C91_05380 PF01578 Cytochrome C assembly protein C1C91_05385 PF01595 Cyclin M transmembrane N-terminal domain C1C91_05385 PF03471 Transporter associated domain C1C91_05385 PF00571 CBS domain C1C91_05390 PF02082 Transcriptional regulator C1C91_05395 PF00175 Oxidoreductase NAD-binding domain C1C91_05395 PF00042 Globin C1C91_05395 PF00970 Oxidoreductase FAD-binding domain C1C91_05400 PF08238 Sel1 repeat C1C91_05410 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C1C91_05410 PF00056 lactate/malate dehydrogenase, NAD binding domain C1C91_05415 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_05420 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_05425 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1C91_05430 PF00005 ABC transporter C1C91_05435 PF01316 Arginine repressor, DNA binding domain C1C91_05435 PF02863 Arginine repressor, C-terminal domain C1C91_05440 PF04261 Dyp-type peroxidase family C1C91_05445 PF08402 TOBE domain C1C91_05445 PF00005 ABC transporter C1C91_05460 PF00543 Nitrogen regulatory protein P-II C1C91_05465 PF00472 RF-1 domain C1C91_05470 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C1C91_05470 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C1C91_05480 PF07670 Nucleoside recognition C1C91_05480 PF07662 Na+ dependent nucleoside transporter C-terminus C1C91_05480 PF01773 Na+ dependent nucleoside transporter N-terminus C1C91_05485 PF03466 LysR substrate binding domain C1C91_05485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_05490 PF00255 Glutathione peroxidase C1C91_05500 PF02595 Glycerate kinase family C1C91_05505 PF02447 GntP family permease C1C91_05510 PF13556 PucR C-terminal helix-turn-helix domain C1C91_05510 PF05651 Putative sugar diacid recognition C1C91_05510 PF17853 GGDEF-like domain C1C91_05515 PF06062 Uncharacterised protein family (UPF0231) C1C91_05535 PF02594 Uncharacterised ACR, YggU family COG1872 C1C91_05540 PF02325 YGGT family C1C91_05545 PF03807 NADP oxidoreductase coenzyme F420-dependent C1C91_05545 PF14748 Pyrroline-5-carboxylate reductase dimerisation C1C91_05550 PF01168 Alanine racemase, N-terminal domain C1C91_05555 PF00437 Type II/IV secretion system protein C1C91_05560 PF00437 Type II/IV secretion system protein C1C91_05565 PF03883 Peroxide stress protein YaaA C1C91_05570 PF00271 Helicase conserved C-terminal domain C1C91_05570 PF00270 DEAD/DEAH box helicase C1C91_05575 PF05175 Methyltransferase small domain C1C91_05580 PF05525 Branched-chain amino acid transport protein C1C91_05595 PF01475 Ferric uptake regulator family C1C91_05600 PF01207 Dihydrouridine synthase (Dus) C1C91_05615 PF00216 Bacterial DNA-binding protein C1C91_05620 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ C1C91_05625 PF07238 PilZ domain C1C91_05630 PF18073 Rubredoxin metal binding domain C1C91_05645 PF18429 Domain of unknown function (DUF5609) C1C91_05655 PF08448 PAS fold C1C91_05655 PF08447 PAS fold C1C91_05655 PF00990 Diguanylate cyclase, GGDEF domain C1C91_05655 PF00563 EAL domain C1C91_05655 PF13426 PAS domain C1C91_05655 PF05231 MASE1 C1C91_05660 PF01048 Phosphorylase superfamily C1C91_05665 PF01676 Metalloenzyme superfamily C1C91_05670 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain C1C91_05670 PF00591 Glycosyl transferase family, a/b domain C1C91_05670 PF02885 Glycosyl transferase family, helical bundle domain C1C91_05675 PF01791 DeoC/LacD family aldolase C1C91_05685 PF07662 Na+ dependent nucleoside transporter C-terminus C1C91_05685 PF07670 Nucleoside recognition C1C91_05685 PF01773 Na+ dependent nucleoside transporter N-terminus C1C91_05690 PF01026 TatD related DNase C1C91_05695 PF07963 Prokaryotic N-terminal methylation motif C1C91_05695 PF14245 Type IV pilin PilA C1C91_05705 PF05958 tRNA (Uracil-5-)-methyltransferase C1C91_05705 PF01938 TRAM domain C1C91_05710 PF00909 Ammonium Transporter Family C1C91_05770 PF00589 Phage integrase family C1C91_05785 PF03739 Lipopolysaccharide export system permease LptF/LptG C1C91_05790 PF03739 Lipopolysaccharide export system permease LptF/LptG C1C91_05795 PF02789 Cytosol aminopeptidase family, N-terminal domain C1C91_05795 PF00883 Cytosol aminopeptidase family, catalytic domain C1C91_05800 PF04364 DNA polymerase III chi subunit, HolC C1C91_05805 PF08264 Anticodon-binding domain of tRNA C1C91_05805 PF00133 tRNA synthetases class I (I, L, M and V) C1C91_05805 PF10458 Valyl tRNA synthetase tRNA binding arm C1C91_05810 PF00571 CBS domain C1C91_05810 PF01595 Cyclin M transmembrane N-terminal domain C1C91_05810 PF03471 Transporter associated domain C1C91_05815 PF09335 SNARE associated Golgi protein C1C91_05820 PF00768 D-alanyl-D-alanine carboxypeptidase C1C91_05855 PF02599 Global regulator protein family C1C91_05860 PF00696 Amino acid kinase family C1C91_05860 PF01842 ACT domain C1C91_05860 PF13840 ACT domain C1C91_05865 PF02272 DHHA1 domain C1C91_05865 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1C91_05865 PF01411 tRNA synthetases class II (A) C1C91_05870 PF02631 RecX family C1C91_05875 PF00154 recA bacterial DNA recombination protein C1C91_05880 PF02464 Competence-damaged protein C1C91_05890 PF00488 MutS domain V C1C91_05890 PF05190 MutS family domain IV C1C91_05890 PF05188 MutS domain II C1C91_05890 PF01624 MutS domain I C1C91_05890 PF05192 MutS domain III C1C91_05895 PF02028 BCCT, betaine/carnitine/choline family transporter C1C91_05935 PF02660 Glycerol-3-phosphate acyltransferase C1C91_05940 PF02152 Dihydroneopterin aldolase C1C91_05945 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C1C91_05955 PF07690 Major Facilitator Superfamily C1C91_05960 PF02492 CobW/HypB/UreG, nucleotide-binding domain C1C91_05960 PF07683 Cobalamin synthesis protein cobW C-terminal domain C1C91_05965 PF04030 D-arabinono-1,4-lactone oxidase C1C91_05965 PF01565 FAD binding domain C1C91_05970 PF01810 LysE type translocator C1C91_05975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_05975 PF03466 LysR substrate binding domain C1C91_05980 PF12792 CSS motif domain associated with EAL C1C91_05980 PF00563 EAL domain C1C91_05985 PF00330 Aconitase family (aconitate hydratase) C1C91_05985 PF11791 Aconitate B N-terminal domain C1C91_05985 PF06434 Aconitate hydratase 2 N-terminus C1C91_05990 PF01734 Patatin-like phospholipase C1C91_05995 PF12729 Four helix bundle sensory module for signal transduction C1C91_05995 PF00672 HAMP domain C1C91_05995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_06000 PF12729 Four helix bundle sensory module for signal transduction C1C91_06000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_06000 PF00672 HAMP domain C1C91_06010 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1C91_06010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1C91_06015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1C91_06015 PF02817 e3 binding domain C1C91_06015 PF00364 Biotin-requiring enzyme C1C91_06020 PF17831 Pyruvate dehydrogenase E1 component middle domain C1C91_06020 PF00456 Transketolase, thiamine diphosphate binding domain C1C91_06025 PF00392 Bacterial regulatory proteins, gntR family C1C91_06025 PF07729 FCD domain C1C91_06035 PF01510 N-acetylmuramoyl-L-alanine amidase C1C91_06045 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C1C91_06045 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C1C91_06050 PF07963 Prokaryotic N-terminal methylation motif C1C91_06055 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C1C91_06055 PF00437 Type II/IV secretion system protein C1C91_06060 PF00482 Type II secretion system (T2SS), protein F C1C91_06065 PF01478 Type IV leader peptidase family C1C91_06065 PF06750 Bacterial Peptidase A24 N-terminal domain C1C91_06070 PF01121 Dephospho-CoA kinase C1C91_06075 PF07072 Cell division protein C1C91_06080 PF03884 DNA gyrase inhibitor YacG C1C91_06085 PF00293 NUDIX domain C1C91_06095 PF01043 SecA preprotein cross-linking domain C1C91_06095 PF07516 SecA Wing and Scaffold domain C1C91_06095 PF07517 SecA DEAD-like domain C1C91_06095 PF02810 SEC-C motif C1C91_06105 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C1C91_06110 PF00091 Tubulin/FtsZ family, GTPase domain C1C91_06110 PF12327 FtsZ family, C-terminal domain C1C91_06115 PF02491 SHS2 domain inserted in FTSA C1C91_06120 PF08478 POTRA domain, FtsQ-type C1C91_06120 PF03799 Cell division protein FtsQ C1C91_06125 PF02875 Mur ligase family, glutamate ligase domain C1C91_06125 PF01225 Mur ligase family, catalytic domain C1C91_06125 PF08245 Mur ligase middle domain C1C91_06130 PF04101 Glycosyltransferase family 28 C-terminal domain C1C91_06130 PF03033 Glycosyltransferase family 28 N-terminal domain C1C91_06135 PF01098 Cell cycle protein C1C91_06140 PF02875 Mur ligase family, glutamate ligase domain C1C91_06140 PF08245 Mur ligase middle domain C1C91_06145 PF00953 Glycosyl transferase family 4 C1C91_06145 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C1C91_06150 PF01225 Mur ligase family, catalytic domain C1C91_06150 PF02875 Mur ligase family, glutamate ligase domain C1C91_06150 PF08245 Mur ligase middle domain C1C91_06155 PF01225 Mur ligase family, catalytic domain C1C91_06155 PF08245 Mur ligase middle domain C1C91_06155 PF02875 Mur ligase family, glutamate ligase domain C1C91_06160 PF03717 Penicillin-binding Protein dimerisation domain C1C91_06160 PF00905 Penicillin binding protein transpeptidase domain C1C91_06165 PF04999 Cell division protein FtsL C1C91_06170 PF01795 MraW methylase family C1C91_06175 PF02381 MraZ protein, putative antitoxin-like C1C91_06185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1C91_06190 PF04348 LppC putative lipoprotein C1C91_06195 PF02021 Uncharacterised protein family UPF0102 C1C91_06200 PF13580 SIS domain C1C91_06205 PF04972 BON domain C1C91_06210 PF04386 Stringent starvation protein B C1C91_06215 PF02798 Glutathione S-transferase, N-terminal domain C1C91_06215 PF00043 Glutathione S-transferase, C-terminal domain C1C91_06220 PF02167 Cytochrome C1 family C1C91_06225 PF00033 Cytochrome b/b6/petB C1C91_06225 PF00032 Cytochrome b(C-terminal)/b6/petD C1C91_06230 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal C1C91_06230 PF00355 Rieske [2Fe-2S] domain C1C91_06235 PF00380 Ribosomal protein S9/S16 C1C91_06240 PF00572 Ribosomal protein L13 C1C91_06245 PF03969 AFG1-like ATPase C1C91_06255 PF13180 PDZ domain C1C91_06255 PF00595 PDZ domain C1C91_06260 PF13180 PDZ domain C1C91_06295 PF03841 L-seryl-tRNA selenium transferase C1C91_06300 PF07071 KDGP aldolase C1C91_06305 PF02378 Phosphotransferase system, EIIC C1C91_06305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C1C91_06305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C1C91_06310 PF00381 PTS HPr component phosphorylation site C1C91_06315 PF03668 P-loop ATPase protein family C1C91_06320 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C1C91_06325 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C1C91_06330 PF00309 Sigma-54 factor, Activator interacting domain (AID) C1C91_06330 PF04963 Sigma-54 factor, core binding domain C1C91_06330 PF04552 Sigma-54, DNA binding domain C1C91_06335 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1C91_06335 PF00005 ABC transporter C1C91_06340 PF03968 OstA-like protein C1C91_06355 PF01380 SIS domain C1C91_06355 PF00571 CBS domain C1C91_06360 PF00005 ABC transporter C1C91_06365 PF02405 Permease MlaE C1C91_06370 PF02470 MlaD protein C1C91_06375 PF05494 MlaC protein C1C91_06385 PF01722 BolA-like protein C1C91_06390 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C1C91_06395 PF03692 Putative zinc- or iron-chelating domain C1C91_06400 PF01609 Transposase DDE domain C1C91_06400 PF13006 Insertion element 4 transposase N-terminal C1C91_06405 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded C1C91_06420 PF07715 TonB-dependent Receptor Plug Domain C1C91_06420 PF00593 TonB dependent receptor C1C91_06435 PF13508 Acetyltransferase (GNAT) domain C1C91_06435 PF00583 Acetyltransferase (GNAT) family C1C91_06440 PF01638 HxlR-like helix-turn-helix C1C91_06445 PF08803 Putative mono-oxygenase ydhR C1C91_06460 PF06055 Exopolysaccharide synthesis, ExoD C1C91_06470 PF13036 Peptidoglycan-synthase activator LpoB C1C91_06475 PF00132 Bacterial transferase hexapeptide (six repeats) C1C91_06495 PF00005 ABC transporter C1C91_06505 PF04055 Radical SAM superfamily C1C91_06505 PF06968 Biotin and Thiamin Synthesis associated domain C1C91_06510 PF05690 Thiazole biosynthesis protein ThiG C1C91_06520 PF00899 ThiF family C1C91_06525 PF02581 Thiamine monophosphate synthase C1C91_06530 PF01964 Radical SAM ThiC family C1C91_06530 PF13667 ThiC-associated domain C1C91_06545 PF00486 Transcriptional regulatory protein, C terminal C1C91_06545 PF00072 Response regulator receiver domain C1C91_06550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_06555 PF18030 RimK PreATP-grasp domain C1C91_06555 PF08443 RimK-like ATP-grasp domain C1C91_06570 PF00999 Sodium/hydrogen exchanger family C1C91_06600 PF07690 Major Facilitator Superfamily C1C91_06605 PF01914 MarC family integral membrane protein C1C91_06615 PF01523 Putative modulator of DNA gyrase C1C91_06620 PF00795 Carbon-nitrogen hydrolase C1C91_06625 PF13116 Protein of unknown function C1C91_06625 PF13502 AsmA-like C-terminal region C1C91_06630 PF00575 S1 RNA binding domain C1C91_06630 PF10150 Ribonuclease E/G family C1C91_06635 PF02545 Maf-like protein C1C91_06640 PF04093 rod shape-determining protein MreD C1C91_06645 PF04085 rod shape-determining protein MreC C1C91_06675 PF07963 Prokaryotic N-terminal methylation motif C1C91_06675 PF00114 Pilin (bacterial filament) C1C91_06680 PF07963 Prokaryotic N-terminal methylation motif C1C91_06680 PF08334 Type II secretion system (T2SS), protein G C1C91_06700 PF00482 Type II secretion system (T2SS), protein F C1C91_06705 PF00437 Type II/IV secretion system protein C1C91_06720 PF00263 Bacterial type II and III secretion system protein C1C91_06720 PF03958 Bacterial type II/III secretion system short domain C1C91_06760 PF01699 Sodium/calcium exchanger protein C1C91_06765 PF00221 Aromatic amino acid lyase C1C91_06770 PF17391 Urocanase N-terminal domain C1C91_06770 PF17392 Urocanase C-terminal domain C1C91_06770 PF01175 Urocanase Rossmann-like domain C1C91_06775 PF00491 Arginase family C1C91_06780 PF01979 Amidohydrolase family C1C91_06785 PF07702 UTRA domain C1C91_06785 PF00392 Bacterial regulatory proteins, gntR family C1C91_06790 PF00484 Carbonic anhydrase C1C91_06795 PF04542 Sigma-70 region 2 C1C91_06795 PF00140 Sigma-70 factor, region 1.2 C1C91_06795 PF04545 Sigma-70, region 4 C1C91_06800 PF18075 FtsX extracellular domain C1C91_06805 PF00005 ABC transporter C1C91_06810 PF02881 SRP54-type protein, helical bundle domain C1C91_06810 PF00448 SRP54-type protein, GTPase domain C1C91_06825 PF07226 Protein of unknown function (DUF1422) C1C91_06830 PF00440 Bacterial regulatory proteins, tetR family C1C91_06840 PF13091 PLD-like domain C1C91_06845 PF01464 Transglycosylase SLT domain C1C91_06845 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1C91_06855 PF02416 mttA/Hcf106 family C1C91_06860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_06860 PF03466 LysR substrate binding domain C1C91_06865 PF01914 MarC family integral membrane protein C1C91_06870 PF10678 Protein of unknown function (DUF2492) C1C91_06875 PF00375 Sodium:dicarboxylate symporter family C1C91_06885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_06885 PF03466 LysR substrate binding domain C1C91_06890 PF13533 Biotin-lipoyl like C1C91_06895 PF07690 Major Facilitator Superfamily C1C91_06900 PF07947 YhhN family C1C91_06915 PF16868 NMT1-like family C1C91_06920 PF00326 Prolyl oligopeptidase family C1C91_06920 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C1C91_06935 PF00106 short chain dehydrogenase C1C91_06940 PF03466 LysR substrate binding domain C1C91_06940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_06945 PF02525 Flavodoxin-like fold C1C91_06950 PF00999 Sodium/hydrogen exchanger family C1C91_06950 PF02254 TrkA-N domain C1C91_07005 PF01196 Ribosomal protein L17 C1C91_07010 PF01000 RNA polymerase Rpb3/RpoA insert domain C1C91_07010 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C1C91_07010 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C1C91_07015 PF01479 S4 domain C1C91_07015 PF00163 Ribosomal protein S4/S9 N-terminal domain C1C91_07020 PF00411 Ribosomal protein S11 C1C91_07025 PF00416 Ribosomal protein S13/S18 C1C91_07030 PF00444 Ribosomal protein L36 C1C91_07035 PF00344 SecY translocase C1C91_07040 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C1C91_07045 PF00327 Ribosomal protein L30p/L7e C1C91_07050 PF00333 Ribosomal protein S5, N-terminal domain C1C91_07050 PF03719 Ribosomal protein S5, C-terminal domain C1C91_07055 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C1C91_07060 PF00347 Ribosomal protein L6 C1C91_07065 PF00410 Ribosomal protein S8 C1C91_07070 PF00253 Ribosomal protein S14p/S29e C1C91_07075 PF00281 Ribosomal protein L5 C1C91_07075 PF00673 ribosomal L5P family C-terminus C1C91_07080 PF00467 KOW motif C1C91_07080 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C1C91_07085 PF00238 Ribosomal protein L14p/L23e C1C91_07090 PF00366 Ribosomal protein S17 C1C91_07095 PF00831 Ribosomal L29 protein C1C91_07100 PF00252 Ribosomal protein L16p/L10e C1C91_07105 PF00189 Ribosomal protein S3, C-terminal domain C1C91_07105 PF07650 KH domain C1C91_07110 PF00237 Ribosomal protein L22p/L17e C1C91_07115 PF00203 Ribosomal protein S19 C1C91_07120 PF00181 Ribosomal Proteins L2, RNA binding domain C1C91_07120 PF03947 Ribosomal Proteins L2, C-terminal domain C1C91_07125 PF00276 Ribosomal protein L23 C1C91_07130 PF00573 Ribosomal protein L4/L1 family C1C91_07135 PF00297 Ribosomal protein L3 C1C91_07140 PF00338 Ribosomal protein S10p/S20e C1C91_07150 PF00672 HAMP domain C1C91_07150 PF00512 His Kinase A (phospho-acceptor) domain C1C91_07150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_07155 PF00486 Transcriptional regulatory protein, C terminal C1C91_07155 PF00072 Response regulator receiver domain C1C91_07160 PF01272 Transcription elongation factor, GreA/GreB, C-term C1C91_07160 PF03449 Transcription elongation factor, N-terminal C1C91_07165 PF00575 S1 RNA binding domain C1C91_07165 PF17674 HHH domain C1C91_07165 PF09371 Tex-like protein N-terminal domain C1C91_07165 PF16921 Tex protein YqgF-like domain C1C91_07180 PF00561 alpha/beta hydrolase fold C1C91_07185 PF00156 Phosphoribosyl transferase domain C1C91_07190 PF01106 NifU-like domain C1C91_07190 PF01521 Iron-sulphur cluster biosynthesis C1C91_07195 PF01609 Transposase DDE domain C1C91_07195 PF13006 Insertion element 4 transposase N-terminal C1C91_07200 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C1C91_07200 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C1C91_07205 PF02556 Preprotein translocase subunit SecB C1C91_07210 PF00581 Rhodanese-like domain C1C91_07215 PF01676 Metalloenzyme superfamily C1C91_07215 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C1C91_07220 PF01551 Peptidase family M23 C1C91_07230 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C1C91_07230 PF00356 Bacterial regulatory proteins, lacI family C1C91_07245 PF01081 KDPG and KHG aldolase C1C91_07250 PF00920 Dehydratase family C1C91_07255 PF01202 Shikimate kinase C1C91_07265 PF13091 PLD-like domain C1C91_07270 PF17191 RecG wedge domain C1C91_07270 PF00271 Helicase conserved C-terminal domain C1C91_07270 PF00270 DEAD/DEAH box helicase C1C91_07280 PF00583 Acetyltransferase (GNAT) family C1C91_07280 PF09500 Putative thioesterase (yiiD_Cterm) C1C91_07290 PF02580 D-Tyr-tRNA(Tyr) deacylase C1C91_07295 PF03631 Virulence factor BrkB C1C91_07305 PF03951 Glutamine synthetase, beta-Grasp domain C1C91_07305 PF00120 Glutamine synthetase, catalytic domain C1C91_07315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_07315 PF00512 His Kinase A (phospho-acceptor) domain C1C91_07315 PF00989 PAS fold C1C91_07320 PF00158 Sigma-54 interaction domain C1C91_07320 PF00072 Response regulator receiver domain C1C91_07320 PF02954 Bacterial regulatory protein, Fis family C1C91_07325 PF00962 Adenosine/AMP deaminase C1C91_07330 PF04055 Radical SAM superfamily C1C91_07330 PF06969 HemN C-terminal domain C1C91_07335 PF10675 Protein of unknown function (DUF2489) C1C91_07340 PF04220 Der GTPase activator (YihI) C1C91_07345 PF00034 Cytochrome c C1C91_07350 PF01926 50S ribosome-binding GTPase C1C91_07360 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C1C91_07360 PF01488 Shikimate / quinate 5-dehydrogenase C1C91_07360 PF08501 Shikimate dehydrogenase substrate binding domain C1C91_07365 PF01218 Coproporphyrinogen III oxidase C1C91_07370 PF01300 Telomere recombination C1C91_07375 PF01396 Topoisomerase DNA binding C4 zinc finger C1C91_07380 PF04361 Protein of unknown function (DUF494) C1C91_07385 PF02481 DNA recombination-mediator protein A C1C91_07385 PF17782 DprA winged helix domain C1C91_07395 PF01327 Polypeptide deformylase C1C91_07400 PF00551 Formyl transferase C1C91_07400 PF02911 Formyl transferase, C-terminal domain C1C91_07405 PF01189 16S rRNA methyltransferase RsmB/F C1C91_07405 PF01029 NusB family C1C91_07415 PF02386 Cation transport protein C1C91_07420 PF02646 RmuC family C1C91_07435 PF02082 Transcriptional regulator C1C91_07440 PF00294 pfkB family carbohydrate kinase C1C91_07445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_07445 PF03466 LysR substrate binding domain C1C91_07450 PF00117 Glutamine amidotransferase class-I C1C91_07450 PF02540 NAD synthase C1C91_07450 PF00958 GMP synthase C terminal domain C1C91_07455 PF00171 Aldehyde dehydrogenase family C1C91_07460 PF00202 Aminotransferase class-III C1C91_07465 PF07883 Cupin domain C1C91_07465 PF01381 Helix-turn-helix C1C91_07470 PF00171 Aldehyde dehydrogenase family C1C91_07475 PF00892 EamA-like transporter family C1C91_07485 PF01810 LysE type translocator C1C91_07490 PF06206 CpeT/CpcT family (DUF1001) C1C91_07510 PF14001 YdfZ protein C1C91_07525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_07525 PF03466 LysR substrate binding domain C1C91_07535 PF13361 UvrD-like helicase C-terminal domain C1C91_07535 PF00580 UvrD/REP helicase N-terminal domain C1C91_07570 PF03466 LysR substrate binding domain C1C91_07570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_07575 PF00107 Zinc-binding dehydrogenase C1C91_07575 PF08240 Alcohol dehydrogenase GroES-like domain C1C91_07580 PF00756 Putative esterase C1C91_07595 PF12867 DinB superfamily C1C91_07595 PF03781 Sulfatase-modifying factor enzyme 1 C1C91_07600 PF13593 SBF-like CPA transporter family (DUF4137) C1C91_07605 PF13520 Amino acid permease C1C91_07610 PF01588 Putative tRNA binding domain C1C91_07630 PF04074 YhcH/YjgK/YiaL C1C91_07635 PF00703 Glycosyl hydrolases family 2 C1C91_07635 PF16353 Domain of unknown function(DUF4981) C1C91_07635 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1C91_07635 PF02929 Beta galactosidase small chain C1C91_07635 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1C91_07640 PF00356 Bacterial regulatory proteins, lacI family C1C91_07675 PF00132 Bacterial transferase hexapeptide (six repeats) C1C91_07680 PF00476 DNA polymerase family A C1C91_07680 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C1C91_07680 PF01612 3'-5' exonuclease C1C91_07680 PF01367 5'-3' exonuclease, C-terminal SAM fold C1C91_07705 PF01545 Cation efflux family C1C91_07705 PF16916 Dimerisation domain of Zinc Transporter C1C91_07710 PF00072 Response regulator receiver domain C1C91_07710 PF00486 Transcriptional regulatory protein, C terminal C1C91_07715 PF00512 His Kinase A (phospho-acceptor) domain C1C91_07715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_07715 PF00672 HAMP domain C1C91_07715 PF16527 Two-component sensor protein CpxA, periplasmic domain C1C91_07720 PF00588 SpoU rRNA Methylase family C1C91_07725 PF01554 MatE C1C91_07730 PF02630 SCO1/SenC C1C91_07740 PF01726 LexA DNA binding domain C1C91_07740 PF00717 Peptidase S24-like C1C91_07745 PF01553 Acyltransferase C1C91_07750 PF01040 UbiA prenyltransferase family C1C91_07755 PF04345 Chorismate lyase C1C91_07760 PF03748 Flagellar basal body-associated protein FliL C1C91_07780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C1C91_07780 PF00356 Bacterial regulatory proteins, lacI family C1C91_07785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C1C91_07795 PF03611 PTS system sugar-specific permease component C1C91_07810 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) C1C91_07825 PF01370 NAD dependent epimerase/dehydratase family C1C91_07830 PF00440 Bacterial regulatory proteins, tetR family C1C91_07830 PF08360 QacR-like protein, C-terminal region C1C91_07835 PF00155 Aminotransferase class I and II C1C91_07840 PF08240 Alcohol dehydrogenase GroES-like domain C1C91_07840 PF00107 Zinc-binding dehydrogenase C1C91_07845 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1C91_07855 PF13361 UvrD-like helicase C-terminal domain C1C91_07855 PF00580 UvrD/REP helicase N-terminal domain C1C91_07860 PF00266 Aminotransferase class-V C1C91_07865 PF02657 Fe-S metabolism associated domain C1C91_07870 PF00899 ThiF family C1C91_07915 PF01177 Asp/Glu/Hydantoin racemase C1C91_07920 PF00593 TonB dependent receptor C1C91_07920 PF07715 TonB-dependent Receptor Plug Domain C1C91_07925 PF00731 AIR carboxylase C1C91_07930 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C1C91_07930 PF02222 ATP-grasp domain C1C91_07935 PF07690 Major Facilitator Superfamily C1C91_07940 PF04397 LytTr DNA-binding domain C1C91_07940 PF00072 Response regulator receiver domain C1C91_07945 PF06580 Histidine kinase C1C91_07945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_07945 PF07694 5TMR of 5TMR-LYT C1C91_07965 PF01609 Transposase DDE domain C1C91_07965 PF05598 Transposase domain (DUF772) C1C91_07980 PF01810 LysE type translocator C1C91_07985 PF07690 Major Facilitator Superfamily C1C91_07995 PF00210 Ferritin-like domain C1C91_08000 PF00990 Diguanylate cyclase, GGDEF domain C1C91_08000 PF05230 MASE2 domain C1C91_08005 PF12241 Trans-2-enoyl-CoA reductase catalytic region C1C91_08005 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C1C91_08005 PF07055 Enoyl reductase FAD binding domain C1C91_08010 PF00582 Universal stress protein family C1C91_08015 PF00579 tRNA synthetases class I (W and Y) C1C91_08020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_08020 PF03466 LysR substrate binding domain C1C91_08040 PF00892 EamA-like transporter family C1C91_08055 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C1C91_08065 PF00625 Guanylate kinase C1C91_08070 PF01192 RNA polymerase Rpb6 C1C91_08075 PF02824 TGS domain C1C91_08075 PF04607 Region found in RelA / SpoT proteins C1C91_08075 PF13291 ACT domain C1C91_08080 PF12105 SpoU, rRNA methylase, C-terminal C1C91_08080 PF00588 SpoU rRNA Methylase family C1C91_08085 PF00132 Bacterial transferase hexapeptide (six repeats) C1C91_08090 PF12146 Serine aminopeptidase, S33 C1C91_08125 PF00440 Bacterial regulatory proteins, tetR family C1C91_08130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1C91_08135 PF00873 AcrB/AcrD/AcrF family C1C91_08140 PF00512 His Kinase A (phospho-acceptor) domain C1C91_08140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_08140 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1C91_08145 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1C91_08145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1C91_08155 PF03814 Potassium-transporting ATPase A subunit C1C91_08165 PF02669 K+-transporting ATPase, c chain C1C91_08170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_08170 PF13492 GAF domain C1C91_08170 PF13493 Domain of unknown function (DUF4118) C1C91_08170 PF00512 His Kinase A (phospho-acceptor) domain C1C91_08170 PF02702 Osmosensitive K+ channel His kinase sensor domain C1C91_08175 PF00486 Transcriptional regulatory protein, C terminal C1C91_08175 PF00072 Response regulator receiver domain C1C91_08195 PF00155 Aminotransferase class I and II C1C91_08200 PF00011 Hsp20/alpha crystallin family C1C91_08205 PF00011 Hsp20/alpha crystallin family C1C91_08210 PF12706 Beta-lactamase superfamily domain C1C91_08215 PF02311 AraC-like ligand binding domain C1C91_08215 PF12833 Helix-turn-helix domain C1C91_08225 PF01751 Toprim domain C1C91_08225 PF00204 DNA gyrase B C1C91_08225 PF00986 DNA gyrase B subunit, carboxyl terminus C1C91_08225 PF18053 DNA gyrase B subunit insert domain C1C91_08225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_08230 PF02463 RecF/RecN/SMC N terminal domain C1C91_08235 PF02768 DNA polymerase III beta subunit, C-terminal domain C1C91_08235 PF02767 DNA polymerase III beta subunit, central domain C1C91_08235 PF00712 DNA polymerase III beta subunit, N-terminal domain C1C91_08240 PF11638 DnaA N-terminal domain C1C91_08240 PF08299 Bacterial dnaA protein helix-turn-helix C1C91_08240 PF00308 Bacterial dnaA protein C1C91_08245 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1C91_08250 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_08260 PF00468 Ribosomal protein L34 C1C91_08265 PF00825 Ribonuclease P C1C91_08270 PF01809 Putative membrane protein insertion efficiency factor C1C91_08275 PF02096 60Kd inner membrane protein C1C91_08275 PF14849 YidC periplasmic domain C1C91_08280 PF10396 GTP-binding protein TrmE N-terminus C1C91_08280 PF12631 MnmE helical domain C1C91_08280 PF01926 50S ribosome-binding GTPase C1C91_08285 PF00589 Phage integrase family C1C91_08285 PF02899 Phage integrase, N-terminal SAM-like domain C1C91_08315 PF02796 Helix-turn-helix domain of resolvase C1C91_08315 PF00239 Resolvase, N terminal domain C1C91_08335 PF07804 HipA-like C-terminal domain C1C91_08335 PF13657 HipA N-terminal domain C1C91_08340 PF13006 Insertion element 4 transposase N-terminal C1C91_08340 PF01609 Transposase DDE domain C1C91_08345 PF01032 FecCD transport family C1C91_08350 PF01497 Periplasmic binding protein C1C91_08355 PF00005 ABC transporter C1C91_08360 PF00005 ABC transporter C1C91_08365 PF00593 TonB dependent receptor C1C91_08365 PF07715 TonB-dependent Receptor Plug Domain C1C91_08370 PF00258 Flavodoxin C1C91_08375 PF01134 Glucose inhibited division protein A C1C91_08375 PF13932 GidA associated domain C1C91_08380 PF02527 rRNA small subunit methyltransferase G C1C91_08385 PF13614 AAA domain C1C91_08390 PF02195 ParB-like nuclease domain C1C91_08390 PF17762 HTH domain found in ParB protein C1C91_08400 PF00119 ATP synthase A chain C1C91_08405 PF00137 ATP synthase subunit C C1C91_08410 PF00430 ATP synthase B/B' CF(0) C1C91_08415 PF00213 ATP synthase delta (OSCP) subunit C1C91_08420 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1C91_08420 PF00306 ATP synthase alpha/beta chain, C terminal domain C1C91_08420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1C91_08425 PF00231 ATP synthase C1C91_08430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1C91_08430 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1C91_08435 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C1C91_08435 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C1C91_08440 PF14602 Hexapeptide repeat of succinyl-transferase C1C91_08440 PF00132 Bacterial transferase hexapeptide (six repeats) C1C91_08440 PF12804 MobA-like NTP transferase domain C1C91_08445 PF06123 Inner membrane protein CreD C1C91_08450 PF00905 Penicillin binding protein transpeptidase domain C1C91_08455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_08455 PF00512 His Kinase A (phospho-acceptor) domain C1C91_08455 PF00672 HAMP domain C1C91_08460 PF00072 Response regulator receiver domain C1C91_08460 PF00486 Transcriptional regulatory protein, C terminal C1C91_08465 PF08220 DeoR-like helix-turn-helix domain C1C91_08465 PF00455 DeoR C terminal sensor domain C1C91_08470 PF01380 SIS domain C1C91_08475 PF08721 TnsA endonuclease C terminal C1C91_08475 PF08722 TnsA endonuclease N terminal C1C91_08480 PF00665 Integrase core domain C1C91_08485 PF13401 AAA domain C1C91_08485 PF11426 Tn7 transposition regulator TnsC C1C91_08490 PF06527 TniQ C1C91_08490 PF15978 Tn7-like transposition protein D C1C91_08495 PF18623 TnsE C-terminal domain C1C91_08505 PF04851 Type III restriction enzyme, res subunit C1C91_08505 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) C1C91_08505 PF00271 Helicase conserved C-terminal domain C1C91_08505 PF08463 EcoEI R protein C-terminal C1C91_08515 PF12161 HsdM N-terminal domain C1C91_08515 PF02384 N-6 DNA Methylase C1C91_08535 PF08721 TnsA endonuclease C terminal C1C91_08535 PF08722 TnsA endonuclease N terminal C1C91_08540 PF00665 Integrase core domain C1C91_08545 PF11426 Tn7 transposition regulator TnsC C1C91_08545 PF13401 AAA domain C1C91_08550 PF15978 Tn7-like transposition protein D C1C91_08550 PF06527 TniQ C1C91_08575 PF00011 Hsp20/alpha crystallin family C1C91_08580 PF02861 Clp amino terminal domain, pathogenicity island component C1C91_08580 PF07724 AAA domain (Cdc48 subfamily) C1C91_08580 PF17871 AAA lid domain C1C91_08580 PF00004 ATPase family associated with various cellular activities (AAA) C1C91_08580 PF10431 C-terminal, D2-small domain, of ClpB protein C1C91_08590 PF00990 Diguanylate cyclase, GGDEF domain C1C91_08590 PF03707 Bacterial signalling protein N terminal repeat C1C91_08590 PF00563 EAL domain C1C91_08600 PF01435 Peptidase family M48 C1C91_08605 PF13180 PDZ domain C1C91_08610 PF00196 Bacterial regulatory proteins, luxR family C1C91_08610 PF03472 Autoinducer binding domain C1C91_08620 PF01618 MotA/TolQ/ExbB proton channel family C1C91_08625 PF01618 MotA/TolQ/ExbB proton channel family C1C91_08630 PF02472 Biopolymer transport protein ExbD/TolR C1C91_08635 PF03544 Gram-negative bacterial TonB protein C-terminal C1C91_08670 PF07969 Amidohydrolase family C1C91_08675 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C1C91_08680 PF01209 ubiE/COQ5 methyltransferase family C1C91_08685 PF02036 SCP-2 sterol transfer family C1C91_08690 PF03109 ABC1 family C1C91_08695 PF02416 mttA/Hcf106 family C1C91_08700 PF02416 mttA/Hcf106 family C1C91_08705 PF00902 Sec-independent protein translocase protein (TatC) C1C91_08715 PF00490 Delta-aminolevulinic acid dehydratase C1C91_08720 PF01432 Peptidase family M3 C1C91_08725 PF03707 Bacterial signalling protein N terminal repeat C1C91_08725 PF00563 EAL domain C1C91_08725 PF00990 Diguanylate cyclase, GGDEF domain C1C91_08730 PF04445 Putative SAM-dependent methyltransferase C1C91_08745 PF02541 Ppx/GppA phosphatase family C1C91_08750 PF00270 DEAD/DEAH box helicase C1C91_08750 PF00271 Helicase conserved C-terminal domain C1C91_08755 PF00085 Thioredoxin C1C91_08760 PF07497 Rho termination factor, RNA-binding domain C1C91_08760 PF07498 Rho termination factor, N-terminal domain C1C91_08760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1C91_08770 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C1C91_08775 PF00175 Oxidoreductase NAD-binding domain C1C91_08780 PF04380 Membrane fusogenic activity C1C91_08790 PF01694 Rhomboid family C1C91_08790 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease C1C91_08795 PF00581 Rhodanese-like domain C1C91_08800 PF01810 LysE type translocator C1C91_08810 PF00005 ABC transporter C1C91_08815 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1C91_08815 PF00005 ABC transporter C1C91_08820 PF11862 Domain of unknown function (DUF3382) C1C91_08820 PF02653 Branched-chain amino acid transport system / permease component C1C91_08825 PF02653 Branched-chain amino acid transport system / permease component C1C91_08830 PF13458 Periplasmic binding protein C1C91_08835 PF00356 Bacterial regulatory proteins, lacI family C1C91_08840 PF01590 GAF domain C1C91_08840 PF00158 Sigma-54 interaction domain C1C91_08845 PF00258 Flavodoxin C1C91_08845 PF00301 Rubredoxin C1C91_08845 PF00753 Metallo-beta-lactamase superfamily C1C91_08850 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1C91_08850 PF18113 Rubredoxin binding C-terminal domain C1C91_08860 PF12801 4Fe-4S binding domain C1C91_08870 PF01212 Beta-eliminating lyase C1C91_08875 PF03222 Tryptophan/tyrosine permease family C1C91_08880 PF03222 Tryptophan/tyrosine permease family C1C91_08895 PF00563 EAL domain C1C91_08895 PF00990 Diguanylate cyclase, GGDEF domain C1C91_08895 PF03707 Bacterial signalling protein N terminal repeat C1C91_08905 PF05746 DALR anticodon binding domain C1C91_08905 PF02092 Glycyl-tRNA synthetase beta subunit C1C91_08910 PF02091 Glycyl-tRNA synthetase alpha subunit C1C91_08915 PF03352 Methyladenine glycosylase C1C91_08920 PF00857 Isochorismatase family C1C91_08930 PF13488 Glycine zipper C1C91_08930 PF00691 OmpA family C1C91_08945 PF01042 Endoribonuclease L-PSP C1C91_08950 PF01206 Sulfurtransferase TusA C1C91_08975 PF01547 Bacterial extracellular solute-binding protein C1C91_08980 PF00512 His Kinase A (phospho-acceptor) domain C1C91_08980 PF00672 HAMP domain C1C91_08980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_08985 PF00486 Transcriptional regulatory protein, C terminal C1C91_08985 PF00072 Response regulator receiver domain C1C91_08990 PF00108 Thiolase, N-terminal domain C1C91_08990 PF02803 Thiolase, C-terminal domain C1C91_08995 PF00378 Enoyl-CoA hydratase/isomerase C1C91_08995 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C1C91_08995 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C1C91_09000 PF00501 AMP-binding enzyme C1C91_09000 PF13193 AMP-binding enzyme C-terminal domain C1C91_09005 PF00557 Metallopeptidase family M24 C1C91_09010 PF09186 Domain of unknown function (DUF1949) C1C91_09010 PF01205 Uncharacterized protein family UPF0029 C1C91_09015 PF02386 Cation transport protein C1C91_09020 PF12724 Flavodoxin domain C1C91_09045 PF13607 Succinyl-CoA ligase like flavodoxin domain C1C91_09045 PF13380 CoA binding domain C1C91_09045 PF00583 Acetyltransferase (GNAT) family C1C91_09060 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C1C91_09060 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C1C91_09065 PF00342 Phosphoglucose isomerase C1C91_09075 PF00924 Mechanosensitive ion channel C1C91_09075 PF05552 Conserved TM helix C1C91_09090 PF00440 Bacterial regulatory proteins, tetR family C1C91_09095 PF00692 dUTPase C1C91_09100 PF04127 DNA / pantothenate metabolism flavoprotein C1C91_09100 PF02441 Flavoprotein C1C91_09105 PF04002 RadC-like JAB domain C1C91_09110 PF00830 Ribosomal L28 family C1C91_09115 PF00471 Ribosomal protein L33 C1C91_09125 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C1C91_09125 PF06827 Zinc finger found in FPG and IleRS C1C91_09125 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C1C91_09130 PF04393 Protein of unknown function (DUF535) C1C91_09135 PF01467 Cytidylyltransferase-like C1C91_09140 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C1C91_09150 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C1C91_09155 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C1C91_09175 PF18019 HD domain C1C91_09175 PF18395 Cas3 C-terminal domain C1C91_09180 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) C1C91_09190 PF09344 CT1975-like protein C1C91_09200 PF08798 CRISPR associated protein C1C91_09205 PF01867 CRISPR associated protein Cas1 C1C91_09210 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) C1C91_09215 PF13592 Winged helix-turn helix C1C91_09215 PF13358 DDE superfamily endonuclease C1C91_09240 PF13358 DDE superfamily endonuclease C1C91_09240 PF13592 Winged helix-turn helix C1C91_09265 PF13358 DDE superfamily endonuclease C1C91_09265 PF13592 Winged helix-turn helix C1C91_09275 PF08340 Domain of unknown function (DUF1732) C1C91_09275 PF03755 YicC-like family, N-terminal region C1C91_09280 PF03725 3' exoribonuclease family, domain 2 C1C91_09280 PF01138 3' exoribonuclease family, domain 1 C1C91_09285 PF00156 Phosphoribosyl transferase domain C1C91_09290 PF00403 Heavy-metal-associated domain C1C91_09295 PF00376 MerR family regulatory protein C1C91_09295 PF09278 MerR, DNA binding C1C91_09300 PF00360 Phytochrome region C1C91_09300 PF00563 EAL domain C1C91_09300 PF01590 GAF domain C1C91_09300 PF00990 Diguanylate cyclase, GGDEF domain C1C91_09305 PF06288 Protein of unknown function (DUF1040) C1C91_09310 PF12801 4Fe-4S binding domain C1C91_09310 PF13746 4Fe-4S dicluster domain C1C91_09310 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase C1C91_09315 PF01636 Phosphotransferase enzyme family C1C91_09320 PF01323 DSBA-like thioredoxin domain C1C91_09325 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_09330 PF00005 ABC transporter C1C91_09340 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C1C91_09340 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C1C91_09345 PF00857 Isochorismatase family C1C91_09355 PF04463 Protein of unknown function (DUF523) C1C91_09360 PF01553 Acyltransferase C1C91_09380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1C91_09380 PF00205 Thiamine pyrophosphate enzyme, central domain C1C91_09380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1C91_09390 PF01063 Amino-transferase class IV C1C91_09395 PF00920 Dehydratase family C1C91_09400 PF00291 Pyridoxal-phosphate dependent enzyme C1C91_09400 PF00585 C-terminal regulatory domain of Threonine dehydratase C1C91_09405 PF01389 OmpA-like transmembrane domain C1C91_09405 PF00691 OmpA family C1C91_09410 PF13006 Insertion element 4 transposase N-terminal C1C91_09410 PF01609 Transposase DDE domain C1C91_09420 PF00440 Bacterial regulatory proteins, tetR family C1C91_09430 PF01197 Ribosomal protein L31 C1C91_09435 PF11066 Protein of unknown function (DUF2867) C1C91_09435 PF13460 NAD(P)H-binding C1C91_09440 PF00390 Malic enzyme, N-terminal domain C1C91_09440 PF03949 Malic enzyme, NAD binding domain C1C91_09450 PF00672 HAMP domain C1C91_09450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_09450 PF00512 His Kinase A (phospho-acceptor) domain C1C91_09500 PF16221 winged helix-turn-helix C1C91_09500 PF16254 Domain of unknown function (DUF4910) C1C91_09500 PF09940 Domain of unknown function (DUF2172) C1C91_09510 PF00128 Alpha amylase, catalytic domain C1C91_09510 PF02903 Alpha amylase, N-terminal ig-like domain C1C91_09525 PF00012 Hsp70 protein C1C91_09530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1C91_09530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1C91_09535 PF05981 CreA protein C1C91_09550 PF01258 Prokaryotic dksA/traR C4-type zinc finger C1C91_09555 PF00120 Glutamine synthetase, catalytic domain C1C91_09565 PF13416 Bacterial extracellular solute-binding protein C1C91_09570 PF13416 Bacterial extracellular solute-binding protein C1C91_09575 PF00005 ABC transporter C1C91_09575 PF08402 TOBE domain C1C91_09580 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_09585 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_09590 PF03473 MOSC domain C1C91_09590 PF03475 3-alpha domain C1C91_09605 PF03061 Thioesterase superfamily C1C91_09610 PF09382 RQC domain C1C91_09610 PF00570 HRDC domain C1C91_09610 PF00270 DEAD/DEAH box helicase C1C91_09610 PF16124 RecQ zinc-binding C1C91_09610 PF00271 Helicase conserved C-terminal domain C1C91_09615 PF00034 Cytochrome c C1C91_09620 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C1C91_09630 PF02592 Putative vitamin uptake transporter C1C91_09635 PF03737 Aldolase/RraA C1C91_09640 PF03448 MgtE intracellular N domain C1C91_09640 PF00571 CBS domain C1C91_09640 PF01769 Divalent cation transporter C1C91_09645 PF10414 Sirohaem synthase dimerisation region C1C91_09645 PF14824 Sirohaem biosynthesis protein central C1C91_09645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1C91_09650 PF01226 Formate/nitrite transporter C1C91_09655 PF13806 Rieske-like [2Fe-2S] domain C1C91_09660 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C1C91_09660 PF04324 BFD-like [2Fe-2S] binding domain C1C91_09660 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C1C91_09660 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1C91_09660 PF18267 Rubredoxin NAD+ reductase C-terminal domain C1C91_09675 PF00005 ABC transporter C1C91_09680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1C91_09690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_09690 PF03466 LysR substrate binding domain C1C91_09695 PF07690 Major Facilitator Superfamily C1C91_09700 PF00004 ATPase family associated with various cellular activities (AAA) C1C91_09700 PF10431 C-terminal, D2-small domain, of ClpB protein C1C91_09700 PF07724 AAA domain (Cdc48 subfamily) C1C91_09705 PF00227 Proteasome subunit C1C91_09715 PF00750 tRNA synthetases class I (R) C1C91_09715 PF05746 DALR anticodon binding domain C1C91_09715 PF03485 Arginyl tRNA synthetase N terminal domain C1C91_09725 PF04545 Sigma-70, region 4 C1C91_09725 PF04542 Sigma-70 region 2 C1C91_09730 PF12973 ChrR Cupin-like domain C1C91_09735 PF02673 Bacitracin resistance protein BacA C1C91_09740 PF00248 Aldo/keto reductase family C1C91_09745 PF01263 Aldose 1-epimerase C1C91_09750 PF10509 Galactokinase galactose-binding signature C1C91_09750 PF08544 GHMP kinases C terminal C1C91_09750 PF00288 GHMP kinases N terminal domain C1C91_09755 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain C1C91_09755 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain C1C91_09760 PF16363 GDP-mannose 4,6 dehydratase C1C91_09765 PF00356 Bacterial regulatory proteins, lacI family C1C91_09770 PF02929 Beta galactosidase small chain C1C91_09770 PF00703 Glycosyl hydrolases family 2 C1C91_09770 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1C91_09770 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1C91_09770 PF16353 Domain of unknown function(DUF4981) C1C91_09775 PF13407 Periplasmic binding protein domain C1C91_09780 PF00005 ABC transporter C1C91_09785 PF02653 Branched-chain amino acid transport system / permease component C1C91_09790 PF02743 Cache domain C1C91_09790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_09790 PF00672 HAMP domain C1C91_09805 PF00696 Amino acid kinase family C1C91_09810 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C1C91_09810 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C1C91_09815 PF03606 C4-dicarboxylate anaerobic carrier C1C91_09820 PF01316 Arginine repressor, DNA binding domain C1C91_09820 PF02863 Arginine repressor, C-terminal domain C1C91_09825 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain C1C91_09825 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain C1C91_09830 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C1C91_09830 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C1C91_09855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_09855 PF00672 HAMP domain C1C91_09855 PF02743 Cache domain C1C91_09865 PF08212 Lipocalin-like domain C1C91_09875 PF00465 Iron-containing alcohol dehydrogenase C1C91_09880 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C1C91_09880 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C1C91_09880 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C1C91_09885 PF02233 NAD(P) transhydrogenase beta subunit C1C91_09890 PF01609 Transposase DDE domain C1C91_09890 PF13006 Insertion element 4 transposase N-terminal C1C91_09895 PF13309 HTH domain C1C91_09895 PF08348 YheO-like PAS domain C1C91_09900 PF03313 Serine dehydratase alpha chain C1C91_09905 PF13525 Outer membrane lipoprotein C1C91_09910 PF00849 RNA pseudouridylate synthase C1C91_09910 PF01479 S4 domain C1C91_09920 PF17871 AAA lid domain C1C91_09920 PF07724 AAA domain (Cdc48 subfamily) C1C91_09920 PF00004 ATPase family associated with various cellular activities (AAA) C1C91_09920 PF10431 C-terminal, D2-small domain, of ClpB protein C1C91_09920 PF02861 Clp amino terminal domain, pathogenicity island component C1C91_09930 PF03590 Aspartate-ammonia ligase C1C91_09935 PF01037 Lrp/AsnC ligand binding domain C1C91_09945 PF00571 CBS domain C1C91_09945 PF00478 IMP dehydrogenase / GMP reductase domain C1C91_09965 PF00512 His Kinase A (phospho-acceptor) domain C1C91_09965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_09975 PF00158 Sigma-54 interaction domain C1C91_09975 PF00072 Response regulator receiver domain C1C91_09980 PF06496 Protein of unknown function (DUF1097) C1C91_09990 PF00174 Oxidoreductase molybdopterin binding domain C1C91_09995 PF01794 Ferric reductase like transmembrane component C1C91_10010 PF00072 Response regulator receiver domain C1C91_10010 PF00486 Transcriptional regulatory protein, C terminal C1C91_10015 PF08918 PhoQ Sensor C1C91_10015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_10025 PF00384 Molybdopterin oxidoreductase C1C91_10025 PF18364 Molybdopterin oxidoreductase N-terminal domain C1C91_10025 PF01568 Molydopterin dinucleotide binding domain C1C91_10030 PF03264 NapC/NirT cytochrome c family, N-terminal region C1C91_10035 PF01131 DNA topoisomerase C1C91_10035 PF01751 Toprim domain C1C91_10045 PF02080 TrkA-C domain C1C91_10045 PF02254 TrkA-N domain C1C91_10050 PF01565 FAD binding domain C1C91_10050 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C1C91_10055 PF02237 Biotin protein ligase C terminal domain C1C91_10055 PF03099 Biotin/lipoate A/B protein ligase family C1C91_10055 PF08279 HTH domain C1C91_10060 PF00485 Phosphoribulokinase / Uridine kinase family C1C91_10075 PF03144 Elongation factor Tu domain 2 C1C91_10075 PF00009 Elongation factor Tu GTP binding domain C1C91_10075 PF03143 Elongation factor Tu C-terminal domain C1C91_10085 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C1C91_10090 PF02357 Transcription termination factor nusG C1C91_10090 PF00467 KOW motif C1C91_10095 PF03946 Ribosomal protein L11, N-terminal domain C1C91_10095 PF00298 Ribosomal protein L11, RNA binding domain C1C91_10100 PF00687 Ribosomal protein L1p/L10e family C1C91_10105 PF00466 Ribosomal protein L10 C1C91_10110 PF16320 Ribosomal protein L7/L12 dimerisation domain C1C91_10110 PF00542 Ribosomal protein L7/L12 C-terminal domain C1C91_10115 PF04565 RNA polymerase Rpb2, domain 3 C1C91_10115 PF04561 RNA polymerase Rpb2, domain 2 C1C91_10115 PF04563 RNA polymerase beta subunit C1C91_10115 PF10385 RNA polymerase beta subunit external 1 domain C1C91_10115 PF00562 RNA polymerase Rpb2, domain 6 C1C91_10115 PF04560 RNA polymerase Rpb2, domain 7 C1C91_10120 PF04983 RNA polymerase Rpb1, domain 3 C1C91_10120 PF00623 RNA polymerase Rpb1, domain 2 C1C91_10120 PF04997 RNA polymerase Rpb1, domain 1 C1C91_10120 PF05000 RNA polymerase Rpb1, domain 4 C1C91_10120 PF04998 RNA polymerase Rpb1, domain 5 C1C91_10125 PF13309 HTH domain C1C91_10125 PF08348 YheO-like PAS domain C1C91_10130 PF01042 Endoribonuclease L-PSP C1C91_10135 PF02635 DsrE/DsrF-like family C1C91_10140 PF02635 DsrE/DsrF-like family C1C91_10145 PF04077 DsrH like protein C1C91_10150 PF00164 Ribosomal protein S12/S23 C1C91_10155 PF00177 Ribosomal protein S7p/S5e C1C91_10160 PF03764 Elongation factor G, domain IV C1C91_10160 PF14492 Elongation Factor G, domain II C1C91_10160 PF00679 Elongation factor G C-terminus C1C91_10160 PF03144 Elongation factor Tu domain 2 C1C91_10160 PF00009 Elongation factor Tu GTP binding domain C1C91_10165 PF00009 Elongation factor Tu GTP binding domain C1C91_10165 PF03144 Elongation factor Tu domain 2 C1C91_10165 PF03143 Elongation factor Tu C-terminal domain C1C91_10205 PF03079 ARD/ARD' family C1C91_10210 PF00860 Permease family C1C91_10215 PF02733 Dak1 domain C1C91_10220 PF02734 DAK2 domain C1C91_10225 PF00381 PTS HPr component phosphorylation site C1C91_10225 PF03610 PTS system fructose IIA component C1C91_10225 PF00391 PEP-utilising enzyme, mobile domain C1C91_10225 PF05524 PEP-utilising enzyme, N-terminal C1C91_10230 PF00989 PAS fold C1C91_10230 PF00158 Sigma-54 interaction domain C1C91_10230 PF02954 Bacterial regulatory protein, Fis family C1C91_10235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_10235 PF03466 LysR substrate binding domain C1C91_10240 PF04371 Porphyromonas-type peptidyl-arginine deiminase C1C91_10245 PF00795 Carbon-nitrogen hydrolase C1C91_10250 PF13416 Bacterial extracellular solute-binding protein C1C91_10260 PF00106 short chain dehydrogenase C1C91_10265 PF01594 AI-2E family transporter C1C91_10270 PF00293 NUDIX domain C1C91_10290 PF06628 Catalase-related immune-responsive C1C91_10290 PF00199 Catalase C1C91_10295 PF00583 Acetyltransferase (GNAT) family C1C91_10315 PF00072 Response regulator receiver domain C1C91_10315 PF00990 Diguanylate cyclase, GGDEF domain C1C91_10325 PF08402 TOBE domain C1C91_10325 PF00005 ABC transporter C1C91_10335 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_10350 PF00392 Bacterial regulatory proteins, gntR family C1C91_10350 PF07702 UTRA domain C1C91_10360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_10360 PF03466 LysR substrate binding domain C1C91_10370 PF02678 Pirin C1C91_10370 PF17954 Quercetinase C-terminal cupin domain C1C91_10375 PF07681 DoxX C1C91_10380 PF17946 RecC C-terminal domain C1C91_10385 PF00580 UvrD/REP helicase N-terminal domain C1C91_10385 PF13361 UvrD-like helicase C-terminal domain C1C91_10385 PF12705 PD-(D/E)XK nuclease superfamily C1C91_10390 PF13538 UvrD-like helicase C-terminal domain C1C91_10400 PF00909 Ammonium Transporter Family C1C91_10405 PF00543 Nitrogen regulatory protein P-II C1C91_10410 PF08448 PAS fold C1C91_10410 PF00990 Diguanylate cyclase, GGDEF domain C1C91_10420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_10420 PF00672 HAMP domain C1C91_10430 PF00072 Response regulator receiver domain C1C91_10430 PF00486 Transcriptional regulatory protein, C terminal C1C91_10435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_10435 PF00512 His Kinase A (phospho-acceptor) domain C1C91_10435 PF00672 HAMP domain C1C91_10440 PF01609 Transposase DDE domain C1C91_10440 PF13006 Insertion element 4 transposase N-terminal C1C91_10445 PF00313 'Cold-shock' DNA-binding domain C1C91_10465 PF00436 Single-strand binding protein family C1C91_10470 PF00196 Bacterial regulatory proteins, luxR family C1C91_10475 PF17755 UvrA DNA-binding domain C1C91_10475 PF00005 ABC transporter C1C91_10475 PF17760 UvrA interaction domain C1C91_10480 PF03922 OmpW family C1C91_10485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_10485 PF00672 HAMP domain C1C91_10500 PF02219 Methylenetetrahydrofolate reductase C1C91_10510 PF03594 Benzoate membrane transport protein C1C91_10515 PF01381 Helix-turn-helix C1C91_10515 PF07883 Cupin domain C1C91_10545 PF04363 Protein of unknown function (DUF496) C1C91_10555 PF04751 Protein of unknown function (DUF615) C1C91_10560 PF01523 Putative modulator of DNA gyrase C1C91_10565 PF07719 Tetratricopeptide repeat C1C91_10565 PF07219 HemY protein N-terminus C1C91_10570 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase C1C91_10575 PF02602 Uroporphyrinogen-III synthase HemD C1C91_10580 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C1C91_10580 PF03900 Porphobilinogen deaminase, C-terminal domain C1C91_10585 PF12633 Adenylate cyclase NT domain C1C91_10585 PF01295 Adenylate cyclase, class-I C1C91_10590 PF02230 Phospholipase/Carboxylesterase C1C91_10595 PF01491 Frataxin-like domain C1C91_10605 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C1C91_10605 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C1C91_10610 PF01678 Diaminopimelate epimerase C1C91_10620 PF02899 Phage integrase, N-terminal SAM-like domain C1C91_10620 PF00589 Phage integrase family C1C91_10625 PF13419 Haloacid dehalogenase-like hydrolase C1C91_10635 PF07722 Peptidase C26 C1C91_10655 PF04307 LexA-binding, inner membrane-associated putative hydrolase C1C91_10660 PF00994 Probable molybdopterin binding domain C1C91_10660 PF02464 Competence-damaged protein C1C91_10670 PF04204 Homoserine O-succinyltransferase C1C91_10680 PF01037 Lrp/AsnC ligand binding domain C1C91_10685 PF00884 Sulfatase C1C91_10695 PF00128 Alpha amylase, catalytic domain C1C91_10695 PF16657 Maltogenic Amylase, C-terminal domain C1C91_10695 PF02903 Alpha amylase, N-terminal ig-like domain C1C91_10700 PF02308 MgtC family C1C91_10720 PF00106 short chain dehydrogenase C1C91_10735 PF00465 Iron-containing alcohol dehydrogenase C1C91_10745 PF01053 Cys/Met metabolism PLP-dependent enzyme C1C91_10755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1C91_10755 PF12793 Sugar transport-related sRNA regulator N-term C1C91_10775 PF00561 alpha/beta hydrolase fold C1C91_10785 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C1C91_10785 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C1C91_10790 PF02698 DUF218 domain C1C91_10795 PF08453 Peptidase family M9 N-terminal C1C91_10795 PF01752 Collagenase C1C91_10810 PF00378 Enoyl-CoA hydratase/isomerase C1C91_10815 PF12697 Alpha/beta hydrolase family C1C91_10820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1C91_10820 PF16582 Middle domain of thiamine pyrophosphate C1C91_10820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1C91_10850 PF00270 DEAD/DEAH box helicase C1C91_10850 PF03880 DbpA RNA binding domain C1C91_10850 PF00271 Helicase conserved C-terminal domain C1C91_10855 PF01773 Na+ dependent nucleoside transporter N-terminus C1C91_10855 PF07670 Nucleoside recognition C1C91_10855 PF07662 Na+ dependent nucleoside transporter C-terminus C1C91_10870 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C1C91_10875 PF01544 CorA-like Mg2+ transporter protein C1C91_10890 PF03471 Transporter associated domain C1C91_10890 PF00999 Sodium/hydrogen exchanger family C1C91_10890 PF02080 TrkA-C domain C1C91_10895 PF05068 Mannitol repressor C1C91_10900 PF08125 Mannitol dehydrogenase C-terminal domain C1C91_10900 PF01232 Mannitol dehydrogenase Rossmann domain C1C91_10905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C1C91_10905 PF02378 Phosphotransferase system, EIIC C1C91_10905 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C1C91_10910 PF00773 RNB domain C1C91_10910 PF17876 Cold shock domain C1C91_10910 PF08206 Ribonuclease B OB domain C1C91_10915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_10915 PF03466 LysR substrate binding domain C1C91_10920 PF00765 Autoinducer synthase C1C91_10925 PF03472 Autoinducer binding domain C1C91_10925 PF00196 Bacterial regulatory proteins, luxR family C1C91_10930 PF01810 LysE type translocator C1C91_10935 PF02872 5'-nucleotidase, C-terminal domain C1C91_10935 PF00149 Calcineurin-like phosphoesterase C1C91_10940 PF03279 Bacterial lipid A biosynthesis acyltransferase C1C91_10950 PF02321 Outer membrane efflux protein C1C91_10955 PF00293 NUDIX domain C1C91_10960 PF06853 Protein of unknown function (DUF1249) C1C91_10965 PF00149 Calcineurin-like phosphoesterase C1C91_10970 PF05728 Uncharacterised protein family (UPF0227) C1C91_10985 PF07869 Protein of unknown function (DUF1656) C1C91_10990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1C91_10990 PF00529 HlyD membrane-fusion protein of T1SS C1C91_10995 PF04632 Fusaric acid resistance protein family C1C91_11000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_11000 PF00986 DNA gyrase B subunit, carboxyl terminus C1C91_11000 PF01751 Toprim domain C1C91_11000 PF00204 DNA gyrase B C1C91_11005 PF03989 DNA gyrase C-terminal domain, beta-propeller C1C91_11005 PF00521 DNA gyrase/topoisomerase IV, subunit A C1C91_11050 PF00226 DnaJ domain C1C91_11050 PF01556 DnaJ C terminal domain C1C91_11050 PF00684 DnaJ central domain C1C91_11060 PF00578 AhpC/TSA family C1C91_11085 PF01553 Acyltransferase C1C91_11090 PF04012 PspA/IM30 family C1C91_11105 PF01541 GIY-YIG catalytic domain C1C91_11110 PF00892 EamA-like transporter family C1C91_11115 PF03167 Uracil DNA glycosylase superfamily C1C91_11130 PF00950 ABC 3 transport family C1C91_11135 PF00005 ABC transporter C1C91_11140 PF01297 Zinc-uptake complex component A periplasmic C1C91_11160 PF01476 LysM domain C1C91_11160 PF08525 Opacity-associated protein A N-terminal motif C1C91_11160 PF01551 Peptidase family M23 C1C91_11165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1C91_11170 PF04222 Protein of unknown function (DUF416) C1C91_11195 PF00892 EamA-like transporter family C1C91_11200 PF01037 Lrp/AsnC ligand binding domain C1C91_11205 PF14602 Hexapeptide repeat of succinyl-transferase C1C91_11205 PF12464 Maltose acetyltransferase C1C91_11210 PF00128 Alpha amylase, catalytic domain C1C91_11210 PF11941 Domain of unknown function (DUF3459) C1C91_11215 PF02378 Phosphotransferase system, EIIC C1C91_11215 PF00367 phosphotransferase system, EIIB C1C91_11220 PF00356 Bacterial regulatory proteins, lacI family C1C91_11235 PF17763 Glutaminase/Asparaginase C-terminal domain C1C91_11235 PF00710 Asparaginase, N-terminal C1C91_11250 PF02142 MGS-like domain C1C91_11255 PF00210 Ferritin-like domain C1C91_11270 PF13718 GNAT acetyltransferase 2 C1C91_11270 PF05127 Helicase C1C91_11270 PF08351 Domain of unknown function (DUF1726) C1C91_11270 PF17176 tRNA-binding domain C1C91_11275 PF02790 Cytochrome C oxidase subunit II, transmembrane domain C1C91_11275 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C1C91_11280 PF00115 Cytochrome C and Quinol oxidase polypeptide I C1C91_11285 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 C1C91_11310 PF01040 UbiA prenyltransferase family C1C91_11315 PF00171 Aldehyde dehydrogenase family C1C91_11320 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_11325 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_11330 PF00005 ABC transporter C1C91_11330 PF08402 TOBE domain C1C91_11335 PF13416 Bacterial extracellular solute-binding protein C1C91_11340 PF03466 LysR substrate binding domain C1C91_11340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_11345 PF03553 Na+/H+ antiporter family C1C91_11385 PF08323 Starch synthase catalytic domain C1C91_11385 PF00534 Glycosyl transferases group 1 C1C91_11390 PF00483 Nucleotidyl transferase C1C91_11395 PF08468 Methyltransferase small domain N-terminal C1C91_11395 PF05175 Methyltransferase small domain C1C91_11400 PF00701 Dihydrodipicolinate synthetase family C1C91_11405 PF00360 Phytochrome region C1C91_11405 PF00990 Diguanylate cyclase, GGDEF domain C1C91_11405 PF00563 EAL domain C1C91_11405 PF01590 GAF domain C1C91_11410 PF13419 Haloacid dehalogenase-like hydrolase C1C91_11415 PF17209 Hfq protein C1C91_11420 PF04403 Paraquat-inducible protein A C1C91_11425 PF02470 MlaD protein C1C91_11430 PF03886 ABC-type transport auxiliary lipoprotein component C1C91_11435 PF01389 OmpA-like transmembrane domain C1C91_11435 PF00691 OmpA family C1C91_11440 PF00657 GDSL-like Lipase/Acylhydrolase C1C91_11450 PF01464 Transglycosylase SLT domain C1C91_11450 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain C1C91_11455 PF04362 Bacterial Fe(2+) trafficking C1C91_11460 PF14815 NUDIX domain C1C91_11460 PF00633 Helix-hairpin-helix motif C1C91_11460 PF10576 Iron-sulfur binding domain of endonuclease III C1C91_11460 PF00730 HhH-GPD superfamily base excision DNA repair protein C1C91_11470 PF13401 AAA domain C1C91_11470 PF01471 Putative peptidoglycan binding domain C1C91_11475 PF01966 HD domain C1C91_11475 PF01743 Poly A polymerase head domain C1C91_11475 PF12627 Probable RNA and SrmB- binding site of polymerase A C1C91_11480 PF01384 Phosphate transporter family C1C91_11485 PF01865 Protein of unknown function DUF47 C1C91_11490 PF01928 CYTH domain C1C91_11495 PF05433 Glycine zipper 2TM domain C1C91_11500 PF00583 Acetyltransferase (GNAT) family C1C91_11505 PF01321 Creatinase/Prolidase N-terminal domain C1C91_11505 PF00557 Metallopeptidase family M24 C1C91_11510 PF00392 Bacterial regulatory proteins, gntR family C1C91_11515 PF01293 Phosphoenolpyruvate carboxykinase C1C91_11520 PF01430 Hsp33 protein C1C91_11525 PF01479 S4 domain C1C91_11530 PF11356 Type II secretion system protein C C1C91_11535 PF00263 Bacterial type II and III secretion system protein C1C91_11535 PF03958 Bacterial type II/III secretion system short domain C1C91_11540 PF00437 Type II/IV secretion system protein C1C91_11545 PF00482 Type II secretion system (T2SS), protein F C1C91_11550 PF07963 Prokaryotic N-terminal methylation motif C1C91_11550 PF08334 Type II secretion system (T2SS), protein G C1C91_11555 PF12019 Type II transport protein GspH C1C91_11555 PF07963 Prokaryotic N-terminal methylation motif C1C91_11560 PF07963 Prokaryotic N-terminal methylation motif C1C91_11560 PF02501 Type II secretion system (T2SS), protein I C1C91_11565 PF07963 Prokaryotic N-terminal methylation motif C1C91_11565 PF11612 Type II secretion system (T2SS), protein J C1C91_11570 PF03934 Type II secretion system (T2SS), protein K C1C91_11575 PF05134 Type II secretion system (T2SS), protein L C1C91_11575 PF12693 GspL periplasmic domain C1C91_11580 PF04612 Type II secretion system (T2SS), protein M C1C91_11585 PF01203 Type II secretion system (T2SS), protein N C1C91_11590 PF00196 Bacterial regulatory proteins, luxR family C1C91_11595 PF01479 S4 domain C1C91_11595 PF00579 tRNA synthetases class I (W and Y) C1C91_11600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_11600 PF03466 LysR substrate binding domain C1C91_11605 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1C91_11610 PF13419 Haloacid dehalogenase-like hydrolase C1C91_11615 PF00293 NUDIX domain C1C91_11620 PF00459 Inositol monophosphatase family C1C91_11630 PF01588 Putative tRNA binding domain C1C91_11640 PF01340 Met Apo-repressor, MetJ C1C91_11645 PF01053 Cys/Met metabolism PLP-dependent enzyme C1C91_11650 PF00742 Homoserine dehydrogenase C1C91_11650 PF03447 Homoserine dehydrogenase, NAD binding domain C1C91_11650 PF00696 Amino acid kinase family C1C91_11655 PF04172 LrgB-like family C1C91_11660 PF03788 LrgA family C1C91_11665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_11665 PF03466 LysR substrate binding domain C1C91_11680 PF00155 Aminotransferase class I and II C1C91_11680 PF00392 Bacterial regulatory proteins, gntR family C1C91_11700 PF04073 Aminoacyl-tRNA editing domain C1C91_11705 PF00990 Diguanylate cyclase, GGDEF domain C1C91_11705 PF08447 PAS fold C1C91_11705 PF08448 PAS fold C1C91_11705 PF13426 PAS domain C1C91_11705 PF00563 EAL domain C1C91_11705 PF05231 MASE1 C1C91_11710 PF00311 Phosphoenolpyruvate carboxylase C1C91_11715 PF01546 Peptidase family M20/M25/M40 C1C91_11715 PF07687 Peptidase dimerisation domain C1C91_11720 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1C91_11720 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1C91_11725 PF00696 Amino acid kinase family C1C91_11730 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C1C91_11730 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C1C91_11735 PF00764 Arginosuccinate synthase C1C91_11745 PF00206 Lyase C1C91_11745 PF14698 Argininosuccinate lyase C-terminal C1C91_11750 PF03466 LysR substrate binding domain C1C91_11750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_11760 PF14552 Tautomerase enzyme C1C91_11790 PF14602 Hexapeptide repeat of succinyl-transferase C1C91_11790 PF12464 Maltose acetyltransferase C1C91_11795 PF13194 Domain of unknown function (DUF4010) C1C91_11800 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1C91_11805 PF00005 ABC transporter C1C91_11810 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_11815 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_11820 PF00291 Pyridoxal-phosphate dependent enzyme C1C91_11825 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C1C91_11825 PF00326 Prolyl oligopeptidase family C1C91_11840 PF03710 Glutamate-ammonia ligase adenylyltransferase C1C91_11840 PF08335 GlnD PII-uridylyltransferase C1C91_11850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_11850 PF00672 HAMP domain C1C91_11850 PF02743 Cache domain C1C91_11855 PF00027 Cyclic nucleotide-binding domain C1C91_11855 PF00520 Ion transport protein C1C91_11860 PF08239 Bacterial SH3 domain C1C91_11865 PF09297 NADH pyrophosphatase zinc ribbon domain C1C91_11865 PF00293 NUDIX domain C1C91_11870 PF01208 Uroporphyrinogen decarboxylase (URO-D) C1C91_11875 PF00480 ROK family C1C91_11880 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1C91_11880 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C1C91_11885 PF00162 Phosphoglycerate kinase C1C91_11890 PF01116 Fructose-bisphosphate aldolase class-II C1C91_11895 PF01266 FAD dependent oxidoreductase C1C91_11905 PF02683 Cytochrome C biogenesis protein transmembrane region C1C91_11905 PF11412 Disulphide bond corrector protein DsbC C1C91_11910 PF03091 CutA1 divalent ion tolerance protein C1C91_11925 PF03466 LysR substrate binding domain C1C91_11925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_11935 PF01571 Aminomethyltransferase folate-binding domain C1C91_11940 PF03937 Flavinator of succinate dehydrogenase C1C91_11950 PF02910 Fumarate reductase flavoprotein C-term C1C91_11950 PF00890 FAD binding domain C1C91_11955 PF04542 Sigma-70 region 2 C1C91_11955 PF08281 Sigma-70, region 4 C1C91_11960 PF03873 Anti sigma-E protein RseA, C-terminal domain C1C91_11960 PF03872 Anti sigma-E protein RseA, N-terminal domain C1C91_11965 PF17188 MucB/RseB C-terminal domain C1C91_11965 PF03888 MucB/RseB N-terminal domain C1C91_11975 PF03144 Elongation factor Tu domain 2 C1C91_11975 PF06421 GTP-binding protein LepA C-terminus C1C91_11975 PF00679 Elongation factor G C-terminus C1C91_11975 PF00009 Elongation factor Tu GTP binding domain C1C91_11980 PF10502 Signal peptidase, peptidase S26 C1C91_11985 PF00035 Double-stranded RNA binding motif C1C91_11985 PF14622 Ribonuclease-III-like C1C91_11990 PF07650 KH domain C1C91_11990 PF01926 50S ribosome-binding GTPase C1C91_11995 PF11967 Recombination protein O N terminal C1C91_11995 PF02565 Recombination protein O C terminal C1C91_12000 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C1C91_12005 PF01510 N-acetylmuramoyl-L-alanine amidase C1C91_12010 PF07308 Protein of unknown function (DUF1456) C1C91_12015 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C1C91_12015 PF00672 HAMP domain C1C91_12015 PF01627 Hpt domain C1C91_12015 PF00512 His Kinase A (phospho-acceptor) domain C1C91_12015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_12015 PF00072 Response regulator receiver domain C1C91_12020 PF05958 tRNA (Uracil-5-)-methyltransferase C1C91_12020 PF01938 TRAM domain C1C91_12025 PF02824 TGS domain C1C91_12025 PF04607 Region found in RelA / SpoT proteins C1C91_12025 PF13291 ACT domain C1C91_12030 PF03819 MazG nucleotide pyrophosphohydrolase domain C1C91_12035 PF06418 CTP synthase N-terminus C1C91_12035 PF00117 Glutamine amidotransferase class-I C1C91_12040 PF00113 Enolase, C-terminal TIM barrel domain C1C91_12040 PF03952 Enolase, N-terminal domain C1C91_12045 PF04977 Septum formation initiator C1C91_12050 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C1C91_12055 PF02542 YgbB family C1C91_12060 PF01142 tRNA pseudouridine synthase D (TruD) C1C91_12065 PF01975 Survival protein SurE C1C91_12075 PF09335 SNARE associated Golgi protein C1C91_12085 PF04539 Sigma-70 region 3 C1C91_12085 PF04542 Sigma-70 region 2 C1C91_12085 PF00140 Sigma-70 factor, region 1.2 C1C91_12085 PF04545 Sigma-70, region 4 C1C91_12090 PF00814 Glycoprotease family C1C91_12095 PF01165 Ribosomal protein S21 C1C91_12100 PF09424 Yqey-like protein C1C91_12105 PF08278 DNA primase DnaG DnaB-binding C1C91_12105 PF01807 CHC2 zinc finger C1C91_12105 PF08275 DNA primase catalytic core, N-terminal domain C1C91_12105 PF10410 DnaB-helicase binding domain of primase C1C91_12110 PF04545 Sigma-70, region 4 C1C91_12110 PF04542 Sigma-70 region 2 C1C91_12110 PF04546 Sigma-70, non-essential region C1C91_12110 PF03979 Sigma-70 factor, region 1.1 C1C91_12110 PF00140 Sigma-70 factor, region 1.2 C1C91_12110 PF04539 Sigma-70 region 3 C1C91_12125 PF00128 Alpha amylase, catalytic domain C1C91_12140 PF13542 Helix-turn-helix domain of transposase family ISL3 C1C91_12140 PF01610 Transposase C1C91_12140 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C1C91_12145 PF02843 Phosphoribosylglycinamide synthetase, C domain C1C91_12145 PF02844 Phosphoribosylglycinamide synthetase, N domain C1C91_12145 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C1C91_12150 PF02142 MGS-like domain C1C91_12150 PF01808 AICARFT/IMPCHase bienzyme C1C91_12155 PF13411 MerR HTH family regulatory protein C1C91_12165 PF03889 Alternative ribosome-rescue factor A C1C91_12175 PF04055 Radical SAM superfamily C1C91_12175 PF06969 HemN C-terminal domain C1C91_12180 PF01725 Ham1 family C1C91_12185 PF07690 Major Facilitator Superfamily C1C91_12190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1C91_12190 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C1C91_12200 PF01957 NfeD-like C-terminal, partner-binding C1C91_12205 PF01145 SPFH domain / Band 7 family C1C91_12205 PF16200 C-terminal region of band_7 C1C91_12210 PF14824 Sirohaem biosynthesis protein central C1C91_12210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1C91_12210 PF10414 Sirohaem synthase dimerisation region C1C91_12215 PF01507 Phosphoadenosine phosphosulfate reductase family C1C91_12220 PF00009 Elongation factor Tu GTP binding domain C1C91_12225 PF02080 TrkA-C domain C1C91_12225 PF03600 Citrate transporter C1C91_12250 PF12729 Four helix bundle sensory module for signal transduction C1C91_12250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_12250 PF00672 HAMP domain C1C91_12270 PF00005 ABC transporter C1C91_12285 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) C1C91_12300 PF00719 Inorganic pyrophosphatase C1C91_12305 PF01225 Mur ligase family, catalytic domain C1C91_12305 PF02875 Mur ligase family, glutamate ligase domain C1C91_12305 PF08245 Mur ligase middle domain C1C91_12310 PF02441 Flavoprotein C1C91_12315 PF00440 Bacterial regulatory proteins, tetR family C1C91_12320 PF00156 Phosphoribosyl transferase domain C1C91_12325 PF00005 ABC transporter C1C91_12340 PF02569 Pantoate-beta-alanine ligase C1C91_12345 PF02548 Ketopantoate hydroxymethyltransferase C1C91_12350 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C1C91_12355 PF12627 Probable RNA and SrmB- binding site of polymerase A C1C91_12355 PF12626 Polymerase A arginine-rich C-terminus C1C91_12355 PF01743 Poly A polymerase head domain C1C91_12360 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1C91_12365 PF01258 Prokaryotic dksA/traR C4-type zinc finger C1C91_12370 PF17746 SfsA N-terminal OB domain C1C91_12370 PF03749 Sugar fermentation stimulation protein RE domain C1C91_12380 PF08482 ATP-dependent helicase C-terminal C1C91_12380 PF00271 Helicase conserved C-terminal domain C1C91_12380 PF00270 DEAD/DEAH box helicase C1C91_12380 PF04408 Helicase associated domain (HA2) C1C91_12385 PF14814 Bifunctional transglycosylase second domain C1C91_12385 PF00905 Penicillin binding protein transpeptidase domain C1C91_12385 PF00912 Transglycosylase C1C91_12390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1C91_12395 PF00893 Small Multidrug Resistance protein C1C91_12400 PF00893 Small Multidrug Resistance protein C1C91_12405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_12405 PF03466 LysR substrate binding domain C1C91_12415 PF01569 PAP2 superfamily C1C91_12430 PF00202 Aminotransferase class-III C1C91_12435 PF00654 Voltage gated chloride channel C1C91_12475 PF02867 Ribonucleotide reductase, barrel domain C1C91_12475 PF00317 Ribonucleotide reductase, all-alpha domain C1C91_12475 PF08343 Ribonucleotide reductase N-terminal C1C91_12485 PF02562 PhoH-like protein C1C91_12485 PF13638 PIN domain C1C91_12490 PF00005 ABC transporter C1C91_12495 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_12515 PF00694 Aconitase C-terminal domain C1C91_12520 PF00330 Aconitase family (aconitate hydratase) C1C91_12525 PF00180 Isocitrate/isopropylmalate dehydrogenase C1C91_12530 PF08502 LeuA allosteric (dimerisation) domain C1C91_12530 PF00682 HMGL-like C1C91_12540 PF01569 PAP2 superfamily C1C91_12555 PF00205 Thiamine pyrophosphate enzyme, central domain C1C91_12555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1C91_12555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1C91_12560 PF10369 Small subunit of acetolactate synthase C1C91_12565 PF07085 DRTGG domain C1C91_12565 PF01515 Phosphate acetyl/butaryl transferase C1C91_12570 PF00871 Acetokinase family C1C91_12575 PF04217 Protein of unknown function, DUF412 C1C91_12580 PF03887 YfbU domain C1C91_12585 PF00578 AhpC/TSA family C1C91_12590 PF01842 ACT domain C1C91_12595 PF00701 Dihydrodipicolinate synthetase family C1C91_12600 PF06804 NlpB/DapX lipoprotein C1C91_12605 PF01259 SAICAR synthetase C1C91_12615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_12615 PF03466 LysR substrate binding domain C1C91_12620 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) C1C91_12640 PF00989 PAS fold C1C91_12640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_12640 PF00072 Response regulator receiver domain C1C91_12640 PF18415 Histidine kinase receptor ArcB trans-membrane domain C1C91_12640 PF01627 Hpt domain C1C91_12640 PF00512 His Kinase A (phospho-acceptor) domain C1C91_12645 PF01966 HD domain C1C91_12655 PF09456 RcsC Alpha-Beta-Loop (ABL) C1C91_12655 PF00072 Response regulator receiver domain C1C91_12655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_12655 PF00512 His Kinase A (phospho-acceptor) domain C1C91_12660 PF03707 Bacterial signalling protein N terminal repeat C1C91_12660 PF00563 EAL domain C1C91_12660 PF00990 Diguanylate cyclase, GGDEF domain C1C91_12665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_12670 PF02357 Transcription termination factor nusG C1C91_12675 PF03180 NLPA lipoprotein C1C91_12680 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_12685 PF00005 ABC transporter C1C91_12685 PF09383 NIL domain C1C91_12700 PF08331 Domain of unknown function (DUF1730) C1C91_12705 PF01256 Carbohydrate kinase C1C91_12705 PF03853 YjeF-related protein N-terminus C1C91_12710 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C1C91_12715 PF01520 N-acetylmuramoyl-L-alanine amidase C1C91_12720 PF01119 DNA mismatch repair protein, C-terminal domain C1C91_12720 PF08676 MutL C terminal dimerisation domain C1C91_12730 PF17209 Hfq protein C1C91_12735 PF01926 50S ribosome-binding GTPase C1C91_12735 PF13167 GTP-binding GTPase N-terminal C1C91_12735 PF16360 GTP-binding GTPase Middle Region C1C91_12740 PF12221 Bacterial membrane protein N terminal C1C91_12740 PF01145 SPFH domain / Band 7 family C1C91_12745 PF01145 SPFH domain / Band 7 family C1C91_12750 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) C1C91_12755 PF00348 Polyprenyl synthetase C1C91_12760 PF00829 Ribosomal prokaryotic L21 protein C1C91_12765 PF01016 Ribosomal L27 protein C1C91_12770 PF01018 GTP1/OBG C1C91_12770 PF01926 50S ribosome-binding GTPase C1C91_12785 PF00296 Luciferase-like monooxygenase C1C91_12795 PF00149 Calcineurin-like phosphoesterase C1C91_12800 PF04379 ApaG domain C1C91_12805 PF00398 Ribosomal RNA adenine dimethylase C1C91_12815 PF00639 PPIC-type PPIASE domain C1C91_12815 PF09312 SurA N-terminal domain C1C91_12820 PF04453 LPS transport system D C1C91_12820 PF03968 OstA-like protein C1C91_12825 PF01636 Phosphotransferase enzyme family C1C91_12830 PF00483 Nucleotidyl transferase C1C91_12835 PF05099 Tellurite resistance protein TerB C1C91_12835 PF00226 DnaJ domain C1C91_12840 PF00860 Permease family C1C91_12850 PF12848 ABC transporter C1C91_12850 PF00005 ABC transporter C1C91_12855 PF01464 Transglycosylase SLT domain C1C91_12865 PF00535 Glycosyl transferase family 2 C1C91_12875 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C1C91_12885 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C1C91_12885 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C1C91_12885 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C1C91_12895 PF00005 ABC transporter C1C91_12900 PF01032 FecCD transport family C1C91_12910 PF06228 Haem utilisation ChuX/HutX C1C91_12915 PF01243 Pyridoxamine 5'-phosphate oxidase C1C91_12935 PF07715 TonB-dependent Receptor Plug Domain C1C91_12935 PF00593 TonB dependent receptor C1C91_12940 PF12832 MFS_1 like family C1C91_12945 PF00512 His Kinase A (phospho-acceptor) domain C1C91_12945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_12945 PF00989 PAS fold C1C91_12950 PF00704 Glycosyl hydrolases family 18 C1C91_12950 PF08329 Chitinase A, N-terminal domain C1C91_12955 PF13847 Methyltransferase domain C1C91_12960 PF00027 Cyclic nucleotide-binding domain C1C91_12960 PF13545 Crp-like helix-turn-helix domain C1C91_12965 PF02566 OsmC-like protein C1C91_12980 PF00485 Phosphoribulokinase / Uridine kinase family C1C91_12985 PF06794 Uncharacterised protein family (UPF0270) C1C91_12990 PF00360 Phytochrome region C1C91_12990 PF00990 Diguanylate cyclase, GGDEF domain C1C91_12990 PF00563 EAL domain C1C91_12990 PF01590 GAF domain C1C91_12995 PF00561 alpha/beta hydrolase fold C1C91_13000 PF01584 CheW-like domain C1C91_13000 PF00072 Response regulator receiver domain C1C91_13010 PF09526 Probable metal-binding protein (DUF2387) C1C91_13015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1C91_13020 PF04102 SlyX C1C91_13030 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C1C91_13030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1C91_13035 PF00072 Response regulator receiver domain C1C91_13035 PF02954 Bacterial regulatory protein, Fis family C1C91_13035 PF00158 Sigma-54 interaction domain C1C91_13055 PF02872 5'-nucleotidase, C-terminal domain C1C91_13055 PF00149 Calcineurin-like phosphoesterase C1C91_13065 PF00772 DnaB-like helicase N terminal domain C1C91_13065 PF03796 DnaB-like helicase C terminal domain C1C91_13070 PF00842 Alanine racemase, C-terminal domain C1C91_13070 PF01168 Alanine racemase, N-terminal domain C1C91_13075 PF01619 Proline dehydrogenase C1C91_13075 PF14850 DNA-binding domain of Proline dehydrogenase C1C91_13075 PF00171 Aldehyde dehydrogenase family C1C91_13075 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C1C91_13085 PF10415 Fumarase C C-terminus C1C91_13085 PF00206 Lyase C1C91_13090 PF03575 Peptidase family S51 C1C91_13095 PF02554 Carbon starvation protein CstA C1C91_13095 PF13722 5TM C-terminal transporter carbon starvation CstA C1C91_13100 PF00072 Response regulator receiver domain C1C91_13100 PF04397 LytTr DNA-binding domain C1C91_13105 PF06580 Histidine kinase C1C91_13105 PF07694 5TMR of 5TMR-LYT C1C91_13115 PF00990 Diguanylate cyclase, GGDEF domain C1C91_13115 PF00989 PAS fold C1C91_13115 PF01590 GAF domain C1C91_13115 PF00563 EAL domain C1C91_13145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_13145 PF03466 LysR substrate binding domain C1C91_13150 PF01810 LysE type translocator C1C91_13155 PF01136 Peptidase family U32 C1C91_13155 PF12392 Collagenase C1C91_13165 PF06906 Protein of unknown function (DUF1272) C1C91_13175 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C1C91_13175 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C1C91_13180 PF02805 Metal binding domain of Ada C1C91_13180 PF12833 Helix-turn-helix domain C1C91_13180 PF00730 HhH-GPD superfamily base excision DNA repair protein C1C91_13180 PF06029 AlkA N-terminal domain C1C91_13185 PF02074 Carboxypeptidase Taq (M32) metallopeptidase C1C91_13210 PF00106 short chain dehydrogenase C1C91_13215 PF03573 outer membrane porin, OprD family C1C91_13220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_13230 PF02447 GntP family permease C1C91_13235 PF01370 NAD dependent epimerase/dehydratase family C1C91_13240 PF01261 Xylose isomerase-like TIM barrel C1C91_13245 PF00596 Class II Aldolase and Adducin N-terminal domain C1C91_13250 PF17042 Nucleotide-binding C-terminal domain C1C91_13250 PF07005 Sugar-binding N-terminal domain C1C91_13255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C1C91_13255 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C1C91_13260 PF08220 DeoR-like helix-turn-helix domain C1C91_13260 PF00455 DeoR C terminal sensor domain C1C91_13270 PF07995 Glucose / Sorbosone dehydrogenase C1C91_13275 PF03976 Polyphosphate kinase 2 (PPK2) C1C91_13300 PF00800 Prephenate dehydratase C1C91_13300 PF01817 Chorismate mutase type II C1C91_13325 PF08349 Protein of unknown function (DUF1722) C1C91_13330 PF13411 MerR HTH family regulatory protein C1C91_13335 PF00875 DNA photolyase C1C91_13335 PF03441 FAD binding domain of DNA photolyase C1C91_13345 PF00106 short chain dehydrogenase C1C91_13385 PF00210 Ferritin-like domain C1C91_13390 PF03063 Prismane/CO dehydrogenase family C1C91_13400 PF16363 GDP-mannose 4,6 dehydratase C1C91_13420 PF00873 AcrB/AcrD/AcrF family C1C91_13425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1C91_13425 PF00529 HlyD membrane-fusion protein of T1SS C1C91_13430 PF00072 Response regulator receiver domain C1C91_13430 PF00486 Transcriptional regulatory protein, C terminal C1C91_13435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_13435 PF00672 HAMP domain C1C91_13435 PF00512 His Kinase A (phospho-acceptor) domain C1C91_13440 PF00916 Sulfate permease family C1C91_13440 PF01740 STAS domain C1C91_13445 PF01965 DJ-1/PfpI family C1C91_13450 PF02558 Ketopantoate reductase PanE/ApbA C1C91_13450 PF08546 Ketopantoate reductase PanE/ApbA C terminal C1C91_13455 PF04461 Protein of unknown function (DUF520) C1C91_13460 PF03502 Nucleoside-specific channel-forming protein, Tsx C1C91_13465 PF07690 Major Facilitator Superfamily C1C91_13475 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C1C91_13485 PF05175 Methyltransferase small domain C1C91_13490 PF01722 BolA-like protein C1C91_13495 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) C1C91_13495 PF11973 NQRA C-terminal domain C1C91_13500 PF03116 NQR2, RnfD, RnfE family C1C91_13505 PF04205 FMN-binding domain C1C91_13510 PF02508 Rnf-Nqr subunit, membrane protein C1C91_13515 PF02508 Rnf-Nqr subunit, membrane protein C1C91_13520 PF00175 Oxidoreductase NAD-binding domain C1C91_13520 PF00970 Oxidoreductase FAD-binding domain C1C91_13520 PF00111 2Fe-2S iron-sulfur cluster binding domain C1C91_13525 PF02424 ApbE family C1C91_13540 PF11799 impB/mucB/samB family C-terminal domain C1C91_13540 PF00817 impB/mucB/samB family C1C91_13540 PF11798 IMS family HHH motif C1C91_13545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_13545 PF00672 HAMP domain C1C91_13550 PF03466 LysR substrate binding domain C1C91_13550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_13565 PF01728 FtsJ-like methyltransferase C1C91_13565 PF18125 RlmM ferredoxin-like domain C1C91_13575 PF18324 Hypothetical protein TT1725 C1C91_13575 PF00180 Isocitrate/isopropylmalate dehydrogenase C1C91_13580 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C1C91_13580 PF01367 5'-3' exonuclease, C-terminal SAM fold C1C91_13585 PF11892 Domain of unknown function (DUF3412) C1C91_13585 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases C1C91_13585 PF03641 Possible lysine decarboxylase C1C91_13590 PF00990 Diguanylate cyclase, GGDEF domain C1C91_13600 PF14489 QueF-like protein C1C91_13600 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C1C91_13605 PF07348 Syd protein (SUKH-2) C1C91_13610 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) C1C91_13635 PF04287 tRNA pseudouridine synthase C C1C91_13640 PF00849 RNA pseudouridylate synthase C1C91_13645 PF00258 Flavodoxin C1C91_13650 PF02264 LamB porin C1C91_13655 PF07148 Maltose operon periplasmic protein precursor (MalM) C1C91_13660 PF00367 phosphotransferase system, EIIB C1C91_13660 PF02378 Phosphotransferase system, EIIC C1C91_13665 PF11944 Protein of unknown function (DUF3461) C1C91_13670 PF00132 Bacterial transferase hexapeptide (six repeats) C1C91_13670 PF14602 Hexapeptide repeat of succinyl-transferase C1C91_13670 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal C1C91_13675 PF01909 Nucleotidyltransferase domain C1C91_13675 PF01842 ACT domain C1C91_13675 PF01966 HD domain C1C91_13675 PF08335 GlnD PII-uridylyltransferase C1C91_13680 PF00557 Metallopeptidase family M24 C1C91_13685 PF00318 Ribosomal protein S2 C1C91_13690 PF00889 Elongation factor TS C1C91_13695 PF00696 Amino acid kinase family C1C91_13700 PF01765 Ribosome recycling factor C1C91_13705 PF01255 Putative undecaprenyl diphosphate synthase C1C91_13715 PF13288 DXP reductoisomerase C-terminal domain C1C91_13715 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C1C91_13715 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C1C91_13720 PF02163 Peptidase family M50 C1C91_13720 PF17820 PDZ domain C1C91_13725 PF07244 Surface antigen variable number repeat C1C91_13725 PF01103 Surface antigen C1C91_13730 PF03938 Outer membrane protein (OmpH-like) C1C91_13735 PF00132 Bacterial transferase hexapeptide (six repeats) C1C91_13735 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C1C91_13740 PF07977 FabA-like domain C1C91_13745 PF00132 Bacterial transferase hexapeptide (six repeats) C1C91_13745 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C1C91_13750 PF02684 Lipid-A-disaccharide synthetase C1C91_13755 PF01351 Ribonuclease HII C1C91_13760 PF07733 Bacterial DNA polymerase III alpha NTPase domain C1C91_13760 PF02811 PHP domain C1C91_13760 PF01336 OB-fold nucleic acid binding domain C1C91_13760 PF14579 Helix-hairpin-helix motif C1C91_13760 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C1C91_13765 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C1C91_13775 PF03466 LysR substrate binding domain C1C91_13775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_13785 PF13520 Amino acid permease C1C91_13795 PF16326 ABC transporter C-terminal domain C1C91_13795 PF00005 ABC transporter C1C91_13795 PF12848 ABC transporter C1C91_13805 PF01431 Peptidase family M13 C1C91_13805 PF05649 Peptidase family M13 C1C91_13810 PF11734 TilS substrate C-terminal domain C1C91_13810 PF09179 TilS substrate binding domain C1C91_13810 PF01171 PP-loop family C1C91_13815 PF00990 Diguanylate cyclase, GGDEF domain C1C91_13820 PF00999 Sodium/hydrogen exchanger family C1C91_13820 PF02254 TrkA-N domain C1C91_13820 PF02080 TrkA-C domain C1C91_13850 PF00072 Response regulator receiver domain C1C91_13850 PF00196 Bacterial regulatory proteins, luxR family C1C91_13860 PF00128 Alpha amylase, catalytic domain C1C91_13875 PF00535 Glycosyl transferase family 2 C1C91_13890 PF01471 Putative peptidoglycan binding domain C1C91_13890 PF03734 L,D-transpeptidase catalytic domain C1C91_13895 PF01609 Transposase DDE domain C1C91_13895 PF13006 Insertion element 4 transposase N-terminal C1C91_13900 PF05951 Bacterial protein of unknown function (DUF882) C1C91_13910 PF03458 UPF0126 domain C1C91_13925 PF04354 ZipA, C-terminal FtsZ-binding domain C1C91_13930 PF12826 Helix-hairpin-helix motif C1C91_13930 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C1C91_13930 PF01653 NAD-dependent DNA ligase adenylation domain C1C91_13930 PF03120 NAD-dependent DNA ligase OB-fold domain C1C91_13930 PF00533 BRCA1 C Terminus (BRCT) domain C1C91_13940 PF13597 Anaerobic ribonucleoside-triphosphate reductase C1C91_13940 PF03477 ATP cone domain C1C91_13950 PF01679 Proteolipid membrane potential modulator C1C91_13970 PF00529 HlyD membrane-fusion protein of T1SS C1C91_13970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1C91_13975 PF01047 MarR family C1C91_13980 PF17203 Single cache domain 3 C1C91_13980 PF00989 PAS fold C1C91_13980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_13980 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C1C91_13985 PF00072 Response regulator receiver domain C1C91_13985 PF12431 Transcriptional regulator C1C91_13990 PF01609 Transposase DDE domain C1C91_13990 PF13006 Insertion element 4 transposase N-terminal C1C91_14000 PF00248 Aldo/keto reductase family C1C91_14005 PF00892 EamA-like transporter family C1C91_14015 PF00171 Aldehyde dehydrogenase family C1C91_14025 PF00990 Diguanylate cyclase, GGDEF domain C1C91_14025 PF07694 5TMR of 5TMR-LYT C1C91_14030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1C91_14035 PF00072 Response regulator receiver domain C1C91_14035 PF00486 Transcriptional regulatory protein, C terminal C1C91_14045 PF12849 PBP superfamily domain C1C91_14050 PF01435 Peptidase family M48 C1C91_14060 PF00480 ROK family C1C91_14065 PF03932 CutC family C1C91_14070 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C1C91_14070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1C91_14075 PF00005 ABC transporter C1C91_14090 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1C91_14100 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_14105 PF00005 ABC transporter C1C91_14115 PF00293 NUDIX domain C1C91_14120 PF08534 Redoxin C1C91_14125 PF01699 Sodium/calcium exchanger protein C1C91_14130 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C1C91_14130 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C1C91_14145 PF00860 Permease family C1C91_14150 PF00072 Response regulator receiver domain C1C91_14150 PF00990 Diguanylate cyclase, GGDEF domain C1C91_14155 PF10692 Protein of unknown function (DUF2498) C1C91_14160 PF01554 MatE C1C91_14165 PF12833 Helix-turn-helix domain C1C91_14170 PF03949 Malic enzyme, NAD binding domain C1C91_14170 PF00390 Malic enzyme, N-terminal domain C1C91_14175 PF00691 OmpA family C1C91_14175 PF01389 OmpA-like transmembrane domain C1C91_14180 PF00691 OmpA family C1C91_14180 PF01389 OmpA-like transmembrane domain C1C91_14185 PF01389 OmpA-like transmembrane domain C1C91_14185 PF00691 OmpA family C1C91_14200 PF00209 Sodium:neurotransmitter symporter family C1C91_14205 PF01734 Patatin-like phospholipase C1C91_14210 PF17158 Membrane-associated sensor, integral membrane domain C1C91_14210 PF00990 Diguanylate cyclase, GGDEF domain C1C91_14225 PF04055 Radical SAM superfamily C1C91_14225 PF11842 Domain of unknown function (DUF3362) C1C91_14225 PF08497 Radical SAM N-terminal C1C91_14255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1C91_14260 PF02075 Crossover junction endodeoxyribonuclease RuvC C1C91_14270 PF01464 Transglycosylase SLT domain C1C91_14270 PF10145 Phage-related minor tail protein C1C91_14270 PF01551 Peptidase family M23 C1C91_14285 PF13091 PLD-like domain C1C91_14285 PF13396 Phospholipase_D-nuclease N-terminal C1C91_14295 PF00551 Formyl transferase C1C91_14295 PF01842 ACT domain C1C91_14300 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C1C91_14310 PF00085 Thioredoxin C1C91_14315 PF01648 4'-phosphopantetheinyl transferase superfamily C1C91_14320 PF00877 NlpC/P60 family C1C91_14325 PF05971 RNA methyltransferase C1C91_14330 PF01575 MaoC like domain C1C91_14340 PF01476 LysM domain C1C91_14340 PF17969 L,D-transpeptidase C-terminal domain C1C91_14340 PF03734 L,D-transpeptidase catalytic domain C1C91_14370 PF10725 Protein of unknown function (DUF2517) C1C91_14375 PF00512 His Kinase A (phospho-acceptor) domain C1C91_14375 PF00989 PAS fold C1C91_14375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_14375 PF01627 Hpt domain C1C91_14375 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1C91_14375 PF00072 Response regulator receiver domain C1C91_14380 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C1C91_14385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1C91_14385 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C1C91_14390 PF02690 Na+/Pi-cotransporter C1C91_14400 PF13520 Amino acid permease C1C91_14405 PF00324 Amino acid permease C1C91_14410 PF00202 Aminotransferase class-III C1C91_14420 PF00171 Aldehyde dehydrogenase family C1C91_14425 PF07883 Cupin domain C1C91_14425 PF01381 Helix-turn-helix C1C91_14430 PF01266 FAD dependent oxidoreductase C1C91_14465 PF00158 Sigma-54 interaction domain C1C91_14465 PF02954 Bacterial regulatory protein, Fis family C1C91_14465 PF00072 Response regulator receiver domain C1C91_14470 PF02254 TrkA-N domain C1C91_14470 PF00999 Sodium/hydrogen exchanger family C1C91_14485 PF04381 Putative exonuclease, RdgC C1C91_14490 PF00583 Acetyltransferase (GNAT) family C1C91_14495 PF00149 Calcineurin-like phosphoesterase C1C91_14495 PF12320 Type 5 capsule protein repressor C-terminal domain C1C91_14505 PF01292 Prokaryotic cytochrome b561 C1C91_14510 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C1C91_14515 PF05524 PEP-utilising enzyme, N-terminal C1C91_14515 PF00391 PEP-utilising enzyme, mobile domain C1C91_14515 PF02896 PEP-utilising enzyme, TIM barrel domain C1C91_14520 PF00381 PTS HPr component phosphorylation site C1C91_14525 PF00291 Pyridoxal-phosphate dependent enzyme C1C91_14530 PF00004 ATPase family associated with various cellular activities (AAA) C1C91_14530 PF17862 AAA+ lid domain C1C91_14530 PF01434 Peptidase family M41 C1C91_14540 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C1C91_14540 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C1C91_14545 PF01980 tRNA-methyltransferase O C1C91_14545 PF18389 TrmO C-terminal domain C1C91_14565 PF00005 ABC transporter C1C91_14565 PF00664 ABC transporter transmembrane region C1C91_14570 PF00005 ABC transporter C1C91_14570 PF00664 ABC transporter transmembrane region C1C91_14585 PF00072 Response regulator receiver domain C1C91_14585 PF00486 Transcriptional regulatory protein, C terminal C1C91_14595 PF03737 Aldolase/RraA C1C91_14610 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) C1C91_14615 PF00588 SpoU rRNA Methylase family C1C91_14625 PF00742 Homoserine dehydrogenase C1C91_14625 PF00696 Amino acid kinase family C1C91_14625 PF01842 ACT domain C1C91_14625 PF13840 ACT domain C1C91_14625 PF03447 Homoserine dehydrogenase, NAD binding domain C1C91_14630 PF08544 GHMP kinases C terminal C1C91_14630 PF00288 GHMP kinases N terminal domain C1C91_14635 PF00291 Pyridoxal-phosphate dependent enzyme C1C91_14635 PF14821 Threonine synthase N terminus C1C91_14670 PF02463 RecF/RecN/SMC N terminal domain C1C91_14680 PF02028 BCCT, betaine/carnitine/choline family transporter C1C91_14695 PF05114 Protein of unknown function (DUF692) C1C91_14715 PF13426 PAS domain C1C91_14715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_14715 PF08447 PAS fold C1C91_14730 PF04632 Fusaric acid resistance protein family C1C91_14735 PF03205 Molybdopterin guanine dinucleotide synthesis protein B C1C91_14740 PF12804 MobA-like NTP transferase domain C1C91_14745 PF00390 Malic enzyme, N-terminal domain C1C91_14745 PF03949 Malic enzyme, NAD binding domain C1C91_14755 PF00860 Permease family C1C91_14765 PF10282 Lactonase, 7-bladed beta-propeller C1C91_14770 PF01810 LysE type translocator C1C91_14775 PF00924 Mechanosensitive ion channel C1C91_14775 PF12794 Mechanosensitive ion channel inner membrane domain 1 C1C91_14775 PF12795 Mechanosensitive ion channel porin domain C1C91_14780 PF00224 Pyruvate kinase, barrel domain C1C91_14780 PF02887 Pyruvate kinase, alpha/beta domain C1C91_14785 PF08007 Cupin superfamily protein C1C91_14790 PF08328 Adenylosuccinate lyase C-terminal C1C91_14790 PF00206 Lyase C1C91_14795 PF04356 Protein of unknown function (DUF489) C1C91_14805 PF00293 NUDIX domain C1C91_14810 PF00849 RNA pseudouridylate synthase C1C91_14815 PF00583 Acetyltransferase (GNAT) family C1C91_14845 PF00180 Isocitrate/isopropylmalate dehydrogenase C1C91_14855 PF00291 Pyridoxal-phosphate dependent enzyme C1C91_14860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_14860 PF03466 LysR substrate binding domain C1C91_14865 PF00816 H-NS histone family C1C91_14870 PF13358 DDE superfamily endonuclease C1C91_14870 PF13592 Winged helix-turn helix C1C91_14875 PF00793 DAHP synthetase I family C1C91_14880 PF08021 Siderophore-interacting FAD-binding domain C1C91_14880 PF04954 Siderophore-interacting protein C1C91_14885 PF02321 Outer membrane efflux protein C1C91_14890 PF00005 ABC transporter C1C91_14890 PF02687 FtsX-like permease family C1C91_14890 PF12704 MacB-like periplasmic core domain C1C91_14895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1C91_14905 PF02463 RecF/RecN/SMC N terminal domain C1C91_14910 PF17158 Membrane-associated sensor, integral membrane domain C1C91_14910 PF00990 Diguanylate cyclase, GGDEF domain C1C91_14915 PF01513 ATP-NAD kinase C1C91_14920 PF01025 GrpE C1C91_14925 PF00012 Hsp70 protein C1C91_14930 PF01556 DnaJ C terminal domain C1C91_14930 PF00226 DnaJ domain C1C91_14930 PF00684 DnaJ central domain C1C91_14935 PF11471 Maltoporin periplasmic N-terminal extension C1C91_14935 PF02264 LamB porin C1C91_14940 PF00294 pfkB family carbohydrate kinase C1C91_14945 PF00367 phosphotransferase system, EIIB C1C91_14945 PF02378 Phosphotransferase system, EIIC C1C91_14950 PF08244 Glycosyl hydrolases family 32 C terminal C1C91_14950 PF00251 Glycosyl hydrolases family 32 N-terminal domain C1C91_14955 PF00356 Bacterial regulatory proteins, lacI family C1C91_14955 PF13407 Periplasmic binding protein domain C1C91_14960 PF02308 MgtC family C1C91_14970 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1C91_14980 PF01022 Bacterial regulatory protein, arsR family C1C91_14985 PF04143 Sulphur transport C1C91_15000 PF00873 AcrB/AcrD/AcrF family C1C91_15005 PF00563 EAL domain C1C91_15005 PF03707 Bacterial signalling protein N terminal repeat C1C91_15005 PF00990 Diguanylate cyclase, GGDEF domain C1C91_15010 PF10437 Bacterial lipoate protein ligase C-terminus C1C91_15010 PF03099 Biotin/lipoate A/B protein ligase family C1C91_15025 PF00873 AcrB/AcrD/AcrF family C1C91_15030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1C91_15030 PF00529 HlyD membrane-fusion protein of T1SS C1C91_15040 PF03372 Endonuclease/Exonuclease/phosphatase family C1C91_15050 PF00072 Response regulator receiver domain C1C91_15055 PF00011 Hsp20/alpha crystallin family C1C91_15060 PF02424 ApbE family C1C91_15065 PF00127 Copper binding proteins, plastocyanin/azurin family C1C91_15080 PF01047 MarR family C1C91_15090 PF01156 Inosine-uridine preferring nucleoside hydrolase C1C91_15100 PF03466 LysR substrate binding domain C1C91_15100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_15105 PF02627 Carboxymuconolactone decarboxylase family C1C91_15110 PF06481 COX Aromatic Rich Motif C1C91_15110 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C1C91_15115 PF00115 Cytochrome C and Quinol oxidase polypeptide I C1C91_15120 PF00510 Cytochrome c oxidase subunit III C1C91_15125 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C1C91_15130 PF01040 UbiA prenyltransferase family C1C91_15135 PF07690 Major Facilitator Superfamily C1C91_15140 PF07237 Protein of unknown function (DUF1428) C1C91_15145 PF01609 Transposase DDE domain C1C91_15145 PF13006 Insertion element 4 transposase N-terminal C1C91_15155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_15155 PF03466 LysR substrate binding domain C1C91_15175 PF07804 HipA-like C-terminal domain C1C91_15175 PF13657 HipA N-terminal domain C1C91_15180 PF01381 Helix-turn-helix C1C91_15190 PF00291 Pyridoxal-phosphate dependent enzyme C1C91_15195 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C1C91_15195 PF00218 Indole-3-glycerol phosphate synthase C1C91_15200 PF02885 Glycosyl transferase family, helical bundle domain C1C91_15200 PF00591 Glycosyl transferase family, a/b domain C1C91_15205 PF02885 Glycosyl transferase family, helical bundle domain C1C91_15205 PF00591 Glycosyl transferase family, a/b domain C1C91_15205 PF00117 Glutamine amidotransferase class-I C1C91_15210 PF00425 chorismate binding enzyme C1C91_15210 PF04715 Anthranilate synthase component I, N terminal region C1C91_15215 PF02811 PHP domain C1C91_15220 PF01300 Telomere recombination C1C91_15225 PF02616 Segregation and condensation protein ScpA C1C91_15230 PF04079 Segregation and condensation complex subunit ScpB C1C91_15235 PF00849 RNA pseudouridylate synthase C1C91_15235 PF01479 S4 domain C1C91_15260 PF00440 Bacterial regulatory proteins, tetR family C1C91_15260 PF08361 MAATS-type transcriptional repressor, C-terminal region C1C91_15265 PF00529 HlyD membrane-fusion protein of T1SS C1C91_15265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1C91_15270 PF00873 AcrB/AcrD/AcrF family C1C91_15275 PF02321 Outer membrane efflux protein C1C91_15340 PF04002 RadC-like JAB domain C1C91_15355 PF01717 Cobalamin-independent synthase, Catalytic domain C1C91_15365 PF03358 NADPH-dependent FMN reductase C1C91_15370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_15370 PF03466 LysR substrate binding domain C1C91_15385 PF00665 Integrase core domain C1C91_15390 PF01695 IstB-like ATP binding protein C1C91_15410 PF01610 Transposase C1C91_15410 PF13542 Helix-turn-helix domain of transposase family ISL3 C1C91_15410 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C1C91_15415 PF00440 Bacterial regulatory proteins, tetR family C1C91_15420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1C91_15420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1C91_15420 PF02770 Acyl-CoA dehydrogenase, middle domain C1C91_15420 PF09317 Domain of unknown function (DUF1974) C1C91_15435 PF02887 Pyruvate kinase, alpha/beta domain C1C91_15435 PF00224 Pyruvate kinase, barrel domain C1C91_15440 PF01418 Helix-turn-helix domain, rpiR family C1C91_15440 PF01380 SIS domain C1C91_15445 PF02685 Glucokinase C1C91_15455 PF00486 Transcriptional regulatory protein, C terminal C1C91_15455 PF00072 Response regulator receiver domain C1C91_15460 PF16363 GDP-mannose 4,6 dehydratase C1C91_15465 PF00483 Nucleotidyl transferase C1C91_15470 PF05523 WxcM-like, C-terminal C1C91_15485 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C1C91_15500 PF00534 Glycosyl transferases group 1 C1C91_15500 PF13439 Glycosyltransferase Family 4 C1C91_15510 PF13439 Glycosyltransferase Family 4 C1C91_15510 PF00534 Glycosyl transferases group 1 C1C91_15515 PF13477 Glycosyl transferase 4-like C1C91_15515 PF00534 Glycosyl transferases group 1 C1C91_15520 PF01370 NAD dependent epimerase/dehydratase family C1C91_15525 PF02397 Bacterial sugar transferase C1C91_15530 PF02719 Polysaccharide biosynthesis protein C1C91_15535 PF04321 RmlD substrate binding domain C1C91_15540 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C1C91_15570 PF02563 Polysaccharide biosynthesis/export protein C1C91_15570 PF10531 SLBB domain C1C91_15570 PF18412 Outer-membrane lipoprotein Wza C-terminal domain C1C91_15575 PF01451 Low molecular weight phosphotyrosine protein phosphatase C1C91_15580 PF02706 Chain length determinant protein C1C91_15580 PF13614 AAA domain C1C91_15580 PF13807 G-rich domain on putative tyrosine kinase C1C91_15595 PF06251 Capsule biosynthesis GfcC C1C91_15600 PF06082 Exopolysaccharide biosynthesis protein YbjH C1C91_15610 PF04337 Protein of unknown function, DUF480 C1C91_15615 PF00176 SNF2 family N-terminal domain C1C91_15615 PF00271 Helicase conserved C-terminal domain C1C91_15615 PF04434 SWIM zinc finger C1C91_15620 PF05472 DNA replication terminus site-binding protein (Ter protein) C1C91_15630 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family C1C91_15635 PF00676 Dehydrogenase E1 component C1C91_15640 PF02780 Transketolase, C-terminal domain C1C91_15640 PF02779 Transketolase, pyrimidine binding domain C1C91_15650 PF12323 Helix-turn-helix domain C1C91_15650 PF01385 Probable transposase C1C91_15650 PF07282 Putative transposase DNA-binding domain C1C91_15655 PF00364 Biotin-requiring enzyme C1C91_15655 PF02817 e3 binding domain C1C91_15655 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1C91_15660 PF00313 'Cold-shock' DNA-binding domain C1C91_15685 PF01548 Transposase C1C91_15685 PF02371 Transposase IS116/IS110/IS902 family C1C91_15695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1C91_15700 PF00892 EamA-like transporter family C1C91_15710 PF07282 Putative transposase DNA-binding domain C1C91_15710 PF01385 Probable transposase C1C91_15710 PF12323 Helix-turn-helix domain C1C91_15715 PF01966 HD domain C1C91_15720 PF01479 S4 domain C1C91_15720 PF00849 RNA pseudouridylate synthase C1C91_15730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1C91_15745 PF12850 Calcineurin-like phosphoesterase superfamily domain C1C91_15760 PF13144 Chaperone for flagella basal body P-ring formation C1C91_15765 PF00072 Response regulator receiver domain C1C91_15765 PF01584 CheW-like domain C1C91_15770 PF01739 CheR methyltransferase, SAM binding domain C1C91_15770 PF03705 CheR methyltransferase, all-alpha domain C1C91_15775 PF00460 Flagella basal body rod protein C1C91_15780 PF00460 Flagella basal body rod protein C1C91_15780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C1C91_15790 PF00460 Flagella basal body rod protein C1C91_15790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C1C91_15795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C1C91_15795 PF00460 Flagella basal body rod protein C1C91_15800 PF00460 Flagella basal body rod protein C1C91_15800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C1C91_15805 PF02107 Flagellar L-ring protein C1C91_15810 PF02119 Flagellar P-ring protein C1C91_15815 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C1C91_15815 PF10135 Rod binding protein C1C91_15820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C1C91_15820 PF07196 Flagellin hook IN motif C1C91_15840 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C1C91_15840 PF13542 Helix-turn-helix domain of transposase family ISL3 C1C91_15840 PF01610 Transposase C1C91_15860 PF12323 Helix-turn-helix domain C1C91_15860 PF07282 Putative transposase DNA-binding domain C1C91_15860 PF01385 Probable transposase C1C91_15870 PF02541 Ppx/GppA phosphatase family C1C91_15875 PF13089 Polyphosphate kinase N-terminal domain C1C91_15875 PF13090 Polyphosphate kinase C-terminal domain 2 C1C91_15875 PF17941 Polyphosphate kinase C-terminal domain 1 C1C91_15875 PF02503 Polyphosphate kinase middle domain C1C91_15880 PF01842 ACT domain C1C91_15890 PF06490 Flagellar regulatory protein FleQ C1C91_15890 PF00158 Sigma-54 interaction domain C1C91_15890 PF02954 Bacterial regulatory protein, Fis family C1C91_15895 PF00989 PAS fold C1C91_15895 PF00512 His Kinase A (phospho-acceptor) domain C1C91_15895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_15900 PF02954 Bacterial regulatory protein, Fis family C1C91_15900 PF00072 Response regulator receiver domain C1C91_15900 PF00158 Sigma-54 interaction domain C1C91_15905 PF01784 NIF3 (NGG1p interacting factor 3) C1C91_15915 PF00586 AIR synthase related protein, N-terminal domain C1C91_15915 PF02769 AIR synthase related protein, C-terminal domain C1C91_15930 PF00308 Bacterial dnaA protein C1C91_15935 PF00463 Isocitrate lyase family C1C91_15940 PF01274 Malate synthase C1C91_15950 PF14437 MafB19-like deaminase C1C91_15955 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_15960 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_15970 PF01895 PhoU domain C1C91_15975 PF01595 Cyclin M transmembrane N-terminal domain C1C91_15975 PF03471 Transporter associated domain C1C91_15975 PF00571 CBS domain C1C91_15985 PF02607 B12 binding domain C1C91_15985 PF02965 Vitamin B12 dependent methionine synthase, activation domain C1C91_15985 PF02310 B12 binding domain C1C91_15985 PF00809 Pterin binding enzyme C1C91_15985 PF02574 Homocysteine S-methyltransferase C1C91_15990 PF13520 Amino acid permease C1C91_16000 PF00005 ABC transporter C1C91_16005 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_16010 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1C91_16020 PF01272 Transcription elongation factor, GreA/GreB, C-term C1C91_16020 PF14760 Rnk N-terminus C1C91_16035 PF00245 Alkaline phosphatase C1C91_16040 PF00245 Alkaline phosphatase C1C91_16045 PF01926 50S ribosome-binding GTPase C1C91_16050 PF07690 Major Facilitator Superfamily C1C91_16055 PF00850 Histone deacetylase domain C1C91_16065 PF06733 DEAD_2 C1C91_16065 PF13307 Helicase C-terminal domain C1C91_16070 PF13609 Gram-negative porin C1C91_16080 PF00155 Aminotransferase class I and II C1C91_16105 PF00005 ABC transporter C1C91_16105 PF00664 ABC transporter transmembrane region C1C91_16110 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C1C91_16115 PF03966 Trm112p-like protein C1C91_16125 PF00072 Response regulator receiver domain C1C91_16125 PF00196 Bacterial regulatory proteins, luxR family C1C91_16135 PF01066 CDP-alcohol phosphatidyltransferase C1C91_16155 PF00589 Phage integrase family C1C91_16155 PF13356 Arm DNA-binding domain C1C91_16175 PF02371 Transposase IS116/IS110/IS902 family C1C91_16175 PF01548 Transposase C1C91_16205 PF01609 Transposase DDE domain C1C91_16205 PF05598 Transposase domain (DUF772) C1C91_16220 PF00107 Zinc-binding dehydrogenase C1C91_16220 PF08240 Alcohol dehydrogenase GroES-like domain C1C91_16230 PF04226 Transglycosylase associated protein C1C91_16235 PF00149 Calcineurin-like phosphoesterase C1C91_16245 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C1C91_16250 PF01406 tRNA synthetases class I (C) catalytic domain C1C91_16250 PF09190 DALR domain C1C91_16300 PF01169 Uncharacterized protein family UPF0016 C1C91_16305 PF01253 Translation initiation factor SUI1 C1C91_16315 PF07664 Ferrous iron transport protein B C terminus C1C91_16315 PF07670 Nucleoside recognition C1C91_16315 PF17910 FeoB cytosolic helical domain C1C91_16315 PF02421 Ferrous iron transport protein B C1C91_16325 PF00437 Type II/IV secretion system protein C1C91_16340 PF01032 FecCD transport family C1C91_16345 PF00005 ABC transporter C1C91_16350 PF00793 DAHP synthetase I family C1C91_16355 PF01219 Prokaryotic diacylglycerol kinase C1C91_16360 PF01842 ACT domain C1C91_16360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1C91_16360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1C91_16370 PF01812 5-formyltetrahydrofolate cyclo-ligase family C1C91_16380 PF01113 Dihydrodipicolinate reductase, N-terminus C1C91_16380 PF05173 Dihydrodipicolinate reductase, C-terminus C1C91_16385 PF00117 Glutamine amidotransferase class-I C1C91_16385 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C1C91_16390 PF02142 MGS-like domain C1C91_16390 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C1C91_16390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1C91_16395 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C1C91_16395 PF13542 Helix-turn-helix domain of transposase family ISL3 C1C91_16395 PF01610 Transposase C1C91_16405 PF08502 LeuA allosteric (dimerisation) domain C1C91_16405 PF00682 HMGL-like C1C91_16415 PF07759 Protein of unknown function (DUF1615) C1C91_16440 PF00271 Helicase conserved C-terminal domain C1C91_16440 PF00270 DEAD/DEAH box helicase C1C91_16450 PF14521 Lysine-specific metallo-endopeptidase C1C91_16470 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1C91_16470 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C1C91_16475 PF01645 Conserved region in glutamate synthase C1C91_16475 PF04898 Glutamate synthase central domain C1C91_16475 PF01493 GXGXG motif C1C91_16475 PF00310 Glutamine amidotransferases class-II C1C91_16480 PF16199 Radical_SAM C-terminal domain C1C91_16480 PF04055 Radical SAM superfamily C1C91_16485 PF03412 Peptidase C39 family C1C91_16485 PF00664 ABC transporter transmembrane region C1C91_16485 PF00005 ABC transporter C1C91_16530 PF00324 Amino acid permease C1C91_16540 PF03618 Kinase/pyrophosphorylase C1C91_16545 PF02896 PEP-utilising enzyme, TIM barrel domain C1C91_16545 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C1C91_16545 PF00391 PEP-utilising enzyme, mobile domain C1C91_16550 PF00005 ABC transporter C1C91_16580 PF03180 NLPA lipoprotein C1C91_16590 PF11890 Domain of unknown function (DUF3410) C1C91_16590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1C91_16590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1C91_16595 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1C91_16595 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1C91_16605 PF01416 tRNA pseudouridine synthase C1C91_16610 PF01039 Carboxyl transferase domain C1C91_16610 PF17848 Acetyl-coA carboxylase zinc finger domain C1C91_16615 PF08245 Mur ligase middle domain C1C91_16615 PF02875 Mur ligase family, glutamate ligase domain C1C91_16620 PF05036 Sporulation related domain C1C91_16625 PF04358 DsrC like protein C1C91_16630 PF12805 FUSC-like inner membrane protein yccS C1C91_16635 PF01027 Inhibitor of apoptosis-promoting Bax1 C1C91_16645 PF07715 TonB-dependent Receptor Plug Domain C1C91_16645 PF07660 Secretin and TonB N terminus short domain C1C91_16645 PF00593 TonB dependent receptor C1C91_16660 PF04303 PrpF protein C1C91_16665 PF00330 Aconitase family (aconitate hydratase) C1C91_16665 PF00694 Aconitase C-terminal domain C1C91_16670 PF00285 Citrate synthase, C-terminal domain C1C91_16685 PF00563 EAL domain C1C91_16685 PF13426 PAS domain C1C91_16685 PF00990 Diguanylate cyclase, GGDEF domain C1C91_16690 PF00849 RNA pseudouridylate synthase C1C91_16700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1C91_16705 PF04209 homogentisate 1,2-dioxygenase C1C91_16715 PF02798 Glutathione S-transferase, N-terminal domain C1C91_16715 PF14497 Glutathione S-transferase, C-terminal domain C1C91_16730 PF13537 Glutamine amidotransferase domain C1C91_16730 PF00733 Asparagine synthase C1C91_16740 PF13344 Haloacid dehalogenase-like hydrolase C1C91_16745 PF00962 Adenosine/AMP deaminase C1C91_16750 PF08240 Alcohol dehydrogenase GroES-like domain C1C91_16750 PF00107 Zinc-binding dehydrogenase C1C91_16755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1C91_16760 PF03741 Integral membrane protein TerC family C1C91_16760 PF03471 Transporter associated domain C1C91_16775 PF01609 Transposase DDE domain C1C91_16775 PF05598 Transposase domain (DUF772) C1C91_16785 PF02913 FAD linked oxidases, C-terminal domain C1C91_16785 PF13183 4Fe-4S dicluster domain C1C91_16785 PF01565 FAD binding domain C1C91_16795 PF03061 Thioesterase superfamily C1C91_16800 PF00271 Helicase conserved C-terminal domain C1C91_16800 PF03880 DbpA RNA binding domain C1C91_16800 PF00270 DEAD/DEAH box helicase C1C91_16810 PF00563 EAL domain C1C91_16810 PF00990 Diguanylate cyclase, GGDEF domain C1C91_16810 PF08448 PAS fold C1C91_16810 PF08447 PAS fold C1C91_16815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_16815 PF03466 LysR substrate binding domain C1C91_16820 PF07690 Major Facilitator Superfamily C1C91_16825 PF13726 Na+-H+ antiporter family C1C91_16825 PF03553 Na+/H+ antiporter family C1C91_16830 PF00929 Exonuclease C1C91_16835 PF00672 HAMP domain C1C91_16835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_16835 PF12729 Four helix bundle sensory module for signal transduction C1C91_16840 PF00691 OmpA family C1C91_16840 PF18393 MotY N-terminal domain C1C91_16845 PF00459 Inositol monophosphatase family C1C91_16855 PF02798 Glutathione S-transferase, N-terminal domain C1C91_16855 PF00043 Glutathione S-transferase, C-terminal domain C1C91_16860 PF02798 Glutathione S-transferase, N-terminal domain C1C91_16860 PF00043 Glutathione S-transferase, C-terminal domain C1C91_16870 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_16875 PF12911 N-terminal TM domain of oligopeptide transport permease C C1C91_16875 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_16880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1C91_16880 PF00005 ABC transporter C1C91_16885 PF07690 Major Facilitator Superfamily C1C91_16895 PF05164 Cell division protein ZapA C1C91_16900 PF03695 Uncharacterised protein family (UPF0149) C1C91_16905 PF01494 FAD binding domain C1C91_16910 PF01494 FAD binding domain C1C91_16930 PF02384 N-6 DNA Methylase C1C91_16935 PF01571 Aminomethyltransferase folate-binding domain C1C91_16935 PF08669 Glycine cleavage T-protein C-terminal barrel domain C1C91_16940 PF01597 Glycine cleavage H-protein C1C91_16945 PF02347 Glycine cleavage system P-protein C1C91_16965 PF07690 Major Facilitator Superfamily C1C91_16970 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1C91_16970 PF13192 Thioredoxin domain C1C91_16975 PF10417 C-terminal domain of 1-Cys peroxiredoxin C1C91_16975 PF00578 AhpC/TSA family C1C91_16980 PF00571 CBS domain C1C91_16985 PF02547 Queuosine biosynthesis protein C1C91_16990 PF01702 Queuine tRNA-ribosyltransferase C1C91_16995 PF02699 Preprotein translocase subunit C1C91_17000 PF13721 SecD export protein N-terminal TM region C1C91_17000 PF02355 Protein export membrane protein C1C91_17000 PF07549 SecD/SecF GG Motif C1C91_17005 PF02355 Protein export membrane protein C1C91_17005 PF07549 SecD/SecF GG Motif C1C91_17010 PF00581 Rhodanese-like domain C1C91_17015 PF07719 Tetratricopeptide repeat C1C91_17015 PF13181 Tetratricopeptide repeat C1C91_17020 PF01136 Peptidase family U32 C1C91_17025 PF01136 Peptidase family U32 C1C91_17030 PF02036 SCP-2 sterol transfer family C1C91_17035 PF00588 SpoU rRNA Methylase family C1C91_17040 PF02082 Transcriptional regulator C1C91_17045 PF00266 Aminotransferase class-V C1C91_17050 PF01592 NifU-like N terminal domain C1C91_17055 PF01521 Iron-sulphur cluster biosynthesis C1C91_17060 PF00226 DnaJ domain C1C91_17060 PF07743 HSCB C-terminal oligomerisation domain C1C91_17065 PF00012 Hsp70 protein C1C91_17070 PF00111 2Fe-2S iron-sulfur cluster binding domain C1C91_17075 PF00883 Cytosol aminopeptidase family, catalytic domain C1C91_17075 PF12404 Peptidase C1C91_17085 PF00334 Nucleoside diphosphate kinase C1C91_17090 PF04055 Radical SAM superfamily C1C91_17100 PF13464 Domain of unknown function (DUF4115) C1C91_17105 PF04551 GcpE protein C1C91_17110 PF13393 Histidyl-tRNA synthetase C1C91_17110 PF03129 Anticodon binding domain C1C91_17115 PF09976 Tetratricopeptide repeat-like domain C1C91_17120 PF13360 PQQ-like domain C1C91_17125 PF01926 50S ribosome-binding GTPase C1C91_17125 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C1C91_17130 PF07191 zinc-ribbons C1C91_17135 PF01464 Transglycosylase SLT domain C1C91_17135 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1C91_17140 PF02769 AIR synthase related protein, C-terminal domain C1C91_17140 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C1C91_17140 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C1C91_17145 PF00361 Proton-conducting membrane transporter C1C91_17150 PF00361 Proton-conducting membrane transporter C1C91_17155 PF00361 Proton-conducting membrane transporter C1C91_17155 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C1C91_17160 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C1C91_17165 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C1C91_17170 PF12838 4Fe-4S dicluster domain C1C91_17175 PF00146 NADH dehydrogenase C1C91_17185 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C1C91_17185 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C1C91_17195 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C1C91_17195 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C1C91_17200 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C1C91_17205 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C1C91_17210 PF00691 OmpA family C1C91_17210 PF13677 Membrane MotB of proton-channel complex MotA/MotB C1C91_17215 PF01618 MotA/TolQ/ExbB proton channel family C1C91_17235 PF09722 Protein of unknown function (DUF2384) C1C91_17240 PF00092 von Willebrand factor type A domain C1C91_17265 PF06508 Queuosine biosynthesis protein QueC C1C91_17290 PF13358 DDE superfamily endonuclease C1C91_17290 PF13592 Winged helix-turn helix C1C91_17295 PF13737 Transposase DDE domain C1C91_17310 PF03432 Relaxase/Mobilisation nuclease domain C1C91_17320 PF02899 Phage integrase, N-terminal SAM-like domain C1C91_17320 PF00589 Phage integrase family C1C91_17330 PF01323 DSBA-like thioredoxin domain C1C91_17350 PF02627 Carboxymuconolactone decarboxylase family C1C91_17385 PF04536 TPM domain C1C91_17405 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) C1C91_17410 PF00248 Aldo/keto reductase family C1C91_17425 PF01212 Beta-eliminating lyase C1C91_17435 PF00072 Response regulator receiver domain C1C91_17435 PF00486 Transcriptional regulatory protein, C terminal C1C91_17450 PF00990 Diguanylate cyclase, GGDEF domain C1C91_17450 PF00563 EAL domain C1C91_17450 PF13188 PAS domain C1C91_17450 PF03707 Bacterial signalling protein N terminal repeat C1C91_17455 PF03806 AbgT putative transporter family C1C91_17460 PF00881 Nitroreductase family C1C91_17475 PF07690 Major Facilitator Superfamily C1C91_17480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_17480 PF03466 LysR substrate binding domain C1C91_17485 PF00925 GTP cyclohydrolase II C1C91_17490 PF02224 Cytidylate kinase C1C91_17495 PF00575 S1 RNA binding domain C1C91_17500 PF00216 Bacterial DNA-binding protein C1C91_17510 PF18073 Rubredoxin metal binding domain C1C91_17515 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C1C91_17530 PF06508 Queuosine biosynthesis protein QueC C1C91_17535 PF04055 Radical SAM superfamily C1C91_17540 PF12843 Putative quorum-sensing-regulated virulence factor C1C91_17545 PF01923 Cobalamin adenosyltransferase C1C91_17550 PF00816 H-NS histone family C1C91_17555 PF03553 Na+/H+ antiporter family C1C91_17560 PF00265 Thymidine kinase C1C91_17570 PF10722 Putative bacterial sensory transduction regulator C1C91_17595 PF00232 Glycosyl hydrolase family 1 C1C91_17610 PF00141 Peroxidase C1C91_17625 PF07804 HipA-like C-terminal domain C1C91_17625 PF13657 HipA N-terminal domain C1C91_17685 PF01609 Transposase DDE domain C1C91_17685 PF05598 Transposase domain (DUF772) C1C91_17745 PF01609 Transposase DDE domain C1C91_17745 PF05598 Transposase domain (DUF772) C1C91_17775 PF02384 N-6 DNA Methylase C1C91_17825 PF02646 RmuC family C1C91_17865 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C1C91_17865 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C1C91_17870 PF01053 Cys/Met metabolism PLP-dependent enzyme C1C91_17880 PF13460 NAD(P)H-binding C1C91_17885 PF03466 LysR substrate binding domain C1C91_17885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_17890 PF12833 Helix-turn-helix domain C1C91_17890 PF02311 AraC-like ligand binding domain C1C91_17895 PF00196 Bacterial regulatory proteins, luxR family C1C91_17895 PF00563 EAL domain C1C91_17900 PF00990 Diguanylate cyclase, GGDEF domain C1C91_17900 PF00360 Phytochrome region C1C91_17900 PF00563 EAL domain C1C91_17900 PF01590 GAF domain C1C91_17910 PF17158 Membrane-associated sensor, integral membrane domain C1C91_17910 PF00990 Diguanylate cyclase, GGDEF domain C1C91_17915 PF02371 Transposase IS116/IS110/IS902 family C1C91_17915 PF01548 Transposase C1C91_17925 PF00593 TonB dependent receptor C1C91_17925 PF07715 TonB-dependent Receptor Plug Domain C1C91_17935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_17935 PF03466 LysR substrate binding domain C1C91_17940 PF01717 Cobalamin-independent synthase, Catalytic domain C1C91_17940 PF08267 Cobalamin-independent synthase, N-terminal domain C1C91_17950 PF00571 CBS domain C1C91_17950 PF01743 Poly A polymerase head domain C1C91_17960 PF04244 Deoxyribodipyrimidine photo-lyase-related protein C1C91_17970 PF00768 D-alanyl-D-alanine carboxypeptidase C1C91_17980 PF08534 Redoxin C1C91_17985 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C1C91_17985 PF01578 Cytochrome C assembly protein C1C91_17990 PF03916 Polysulphide reductase, NrfD C1C91_17995 PF00037 4Fe-4S binding domain C1C91_17995 PF13247 4Fe-4S dicluster domain C1C91_18000 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) C1C91_18000 PF13435 Cytochrome c554 and c-prime C1C91_18005 PF02335 Cytochrome c552 C1C91_18015 PF00890 FAD binding domain C1C91_18025 PF02810 SEC-C motif C1C91_18035 PF00480 ROK family C1C91_18035 PF01047 MarR family C1C91_18045 PF00072 Response regulator receiver domain C1C91_18050 PF01970 Tripartite tricarboxylate transporter TctA family C1C91_18060 PF03401 Tripartite tricarboxylate transporter family receptor C1C91_18065 PF10145 Phage-related minor tail protein C1C91_18065 PF01464 Transglycosylase SLT domain C1C91_18065 PF01551 Peptidase family M23 C1C91_18070 PF02080 TrkA-C domain C1C91_18070 PF06826 Predicted Permease Membrane Region C1C91_18085 PF02151 UvrB/uvrC motif C1C91_18085 PF17757 UvrB interaction domain C1C91_18085 PF04851 Type III restriction enzyme, res subunit C1C91_18085 PF00271 Helicase conserved C-terminal domain C1C91_18085 PF12344 Ultra-violet resistance protein B C1C91_18095 PF09335 SNARE associated Golgi protein C1C91_18100 PF02600 Disulfide bond formation protein DsbB C1C91_18105 PF06450 Bacterial Na+/H+ antiporter B (NhaB) C1C91_18110 PF00392 Bacterial regulatory proteins, gntR family C1C91_18110 PF07840 FadR C-terminal domain C1C91_18115 PF04293 SpoVR like protein C1C91_18120 PF04285 Protein of unknown function (DUF444) C1C91_18125 PF06798 PrkA serine protein kinase C-terminal domain C1C91_18125 PF08298 PrkA AAA domain C1C91_18130 PF00570 HRDC domain C1C91_18130 PF00271 Helicase conserved C-terminal domain C1C91_18130 PF00270 DEAD/DEAH box helicase C1C91_18130 PF09382 RQC domain C1C91_18130 PF16124 RecQ zinc-binding C1C91_18140 PF03222 Tryptophan/tyrosine permease family C1C91_18150 PF04715 Anthranilate synthase component I, N terminal region C1C91_18150 PF00425 chorismate binding enzyme C1C91_18170 PF00343 Carbohydrate phosphorylase C1C91_18175 PF13006 Insertion element 4 transposase N-terminal C1C91_18175 PF01609 Transposase DDE domain C1C91_18190 PF00085 Thioredoxin C1C91_18195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_18195 PF00512 His Kinase A (phospho-acceptor) domain C1C91_18195 PF01627 Hpt domain C1C91_18195 PF00672 HAMP domain C1C91_18195 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C1C91_18195 PF00072 Response regulator receiver domain C1C91_18200 PF00664 ABC transporter transmembrane region C1C91_18200 PF00005 ABC transporter C1C91_18205 PF00664 ABC transporter transmembrane region C1C91_18205 PF00005 ABC transporter C1C91_18225 PF01575 MaoC like domain C1C91_18230 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus C1C91_18230 PF00561 alpha/beta hydrolase fold C1C91_18250 PF08543 Phosphomethylpyrimidine kinase C1C91_18260 PF13673 Acetyltransferase (GNAT) domain C1C91_18270 PF01928 CYTH domain C1C91_18280 PF02694 Uncharacterised BCR, YnfA/UPF0060 family C1C91_18290 PF13673 Acetyltransferase (GNAT) domain C1C91_18295 PF00270 DEAD/DEAH box helicase C1C91_18295 PF00271 Helicase conserved C-terminal domain C1C91_18300 PF00255 Glutathione peroxidase C1C91_18310 PF07478 D-ala D-ala ligase C-terminus C1C91_18310 PF01820 D-ala D-ala ligase N-terminus C1C91_18325 PF03466 LysR substrate binding domain C1C91_18325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_18340 PF11398 Protein of unknown function (DUF2813) C1C91_18385 PF02789 Cytosol aminopeptidase family, N-terminal domain C1C91_18385 PF00883 Cytosol aminopeptidase family, catalytic domain C1C91_18390 PF13419 Haloacid dehalogenase-like hydrolase C1C91_18395 PF01546 Peptidase family M20/M25/M40 C1C91_18395 PF07687 Peptidase dimerisation domain C1C91_18420 PF00365 Phosphofructokinase C1C91_18425 PF00121 Triosephosphate isomerase C1C91_18430 PF02698 DUF218 domain C1C91_18435 PF13847 Methyltransferase domain C1C91_18440 PF03882 MukF winged-helix domain C1C91_18440 PF17193 MukF C-terminal domain C1C91_18440 PF17192 MukF middle domain C1C91_18445 PF04288 MukE-like family C1C91_18450 PF04310 MukB N-terminal C1C91_18450 PF16330 MukB hinge domain C1C91_18455 PF05036 Sporulation related domain C1C91_18455 PF03330 Lytic transglycolase C1C91_18480 PF00300 Histidine phosphatase superfamily (branch 1) C1C91_18490 PF12323 Helix-turn-helix domain C1C91_18490 PF01385 Probable transposase C1C91_18490 PF07282 Putative transposase DNA-binding domain C1C91_18520 PF08274 PhnA Zinc-Ribbon C1C91_18520 PF03831 PhnA domain C1C91_18555 PF01713 Smr domain C1C91_18560 PF05175 Methyltransferase small domain C1C91_18565 PF01264 Chorismate synthase C1C91_18575 PF00270 DEAD/DEAH box helicase C1C91_18575 PF00271 Helicase conserved C-terminal domain C1C91_18590 PF03222 Tryptophan/tyrosine permease family C1C91_18595 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C1C91_18595 PF00356 Bacterial regulatory proteins, lacI family C1C91_18600 PF00381 PTS HPr component phosphorylation site C1C91_18600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C1C91_18605 PF00294 pfkB family carbohydrate kinase C1C91_18610 PF02378 Phosphotransferase system, EIIC C1C91_18610 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C1C91_18615 PF06945 Protein of unknown function (DUF1289) C1C91_18620 PF06725 3D domain C1C91_18620 PF03562 MltA specific insert domain C1C91_18625 PF00111 2Fe-2S iron-sulfur cluster binding domain C1C91_18630 PF00268 Ribonucleotide reductase, small chain C1C91_18635 PF03477 ATP cone domain C1C91_18635 PF02867 Ribonucleotide reductase, barrel domain C1C91_18635 PF00317 Ribonucleotide reductase, all-alpha domain C1C91_18640 PF13419 Haloacid dehalogenase-like hydrolase C1C91_18650 PF00521 DNA gyrase/topoisomerase IV, subunit A C1C91_18650 PF03989 DNA gyrase C-terminal domain, beta-propeller C1C91_18655 PF04055 Radical SAM superfamily C1C91_18670 PF02824 TGS domain C1C91_18670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1C91_18670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1C91_18670 PF03129 Anticodon binding domain C1C91_18675 PF05198 Translation initiation factor IF-3, N-terminal domain C1C91_18675 PF00707 Translation initiation factor IF-3, C-terminal domain C1C91_18680 PF01632 Ribosomal protein L35 C1C91_18685 PF00453 Ribosomal protein L20 C1C91_18700 PF02899 Phage integrase, N-terminal SAM-like domain C1C91_18700 PF00589 Phage integrase family C1C91_18705 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C1C91_18705 PF01409 tRNA synthetases class II core domain (F) C1C91_18710 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C1C91_18710 PF03483 B3/4 domain C1C91_18710 PF01588 Putative tRNA binding domain C1C91_18710 PF03147 Ferredoxin-fold anticodon binding domain C1C91_18710 PF03484 tRNA synthetase B5 domain C1C91_18715 PF00216 Bacterial DNA-binding protein C1C91_18720 PF00512 His Kinase A (phospho-acceptor) domain C1C91_18720 PF00072 Response regulator receiver domain C1C91_18720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_18720 PF09456 RcsC Alpha-Beta-Loop (ABL) C1C91_18735 PF02146 Sir2 family C1C91_18750 PF12323 Helix-turn-helix domain C1C91_18750 PF01385 Probable transposase C1C91_18750 PF07282 Putative transposase DNA-binding domain C1C91_18760 PF00356 Bacterial regulatory proteins, lacI family C1C91_18765 PF00294 pfkB family carbohydrate kinase C1C91_18770 PF13407 Periplasmic binding protein domain C1C91_18775 PF02653 Branched-chain amino acid transport system / permease component C1C91_18780 PF00005 ABC transporter C1C91_18785 PF05025 RbsD / FucU transport protein family C1C91_18790 PF00043 Glutathione S-transferase, C-terminal domain C1C91_18790 PF02798 Glutathione S-transferase, N-terminal domain C1C91_18800 PF12323 Helix-turn-helix domain C1C91_18800 PF07282 Putative transposase DNA-binding domain C1C91_18800 PF01385 Probable transposase C1C91_18815 PF01171 PP-loop family C1C91_18820 PF00582 Universal stress protein family C1C91_18825 PF13545 Crp-like helix-turn-helix domain C1C91_18825 PF00027 Cyclic nucleotide-binding domain C1C91_18840 PF00403 Heavy-metal-associated domain C1C91_18850 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C1C91_18850 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1C91_18865 PF00115 Cytochrome C and Quinol oxidase polypeptide I C1C91_18875 PF13185 GAF domain C1C91_18880 PF04352 ProQ/FINO family C1C91_18880 PF17516 ProQ C-terminal domain C1C91_18885 PF17804 Tail specific protease N-terminal domain C1C91_18885 PF00595 PDZ domain C1C91_18885 PF03572 Peptidase family S41 C1C91_18885 PF11818 C-terminal domain of tail specific protease (DUF3340) C1C91_18890 PF01433 Peptidase family M1 domain C1C91_18890 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C1C91_18890 PF11940 Domain of unknown function (DUF3458) Ig-like fold C1C91_18900 PF05088 Bacterial NAD-glutamate dehydrogenase C1C91_18905 PF01180 Dihydroorotate dehydrogenase C1C91_18910 PF07126 Cell-division protein ZapC C1C91_18915 PF01170 Putative RNA methylase family UPF0020 C1C91_18915 PF10672 S-adenosylmethionine-dependent methyltransferase C1C91_18915 PF02926 THUMP domain C1C91_18935 PF04957 Ribosome modulation factor C1C91_18940 PF07977 FabA-like domain C1C91_18945 PF13654 AAA domain C1C91_18945 PF05362 Lon protease (S16) C-terminal proteolytic domain C1C91_18955 PF07130 YebG protein C1C91_18970 PF04403 Paraquat-inducible protein A C1C91_18980 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF C1C91_18980 PF01189 16S rRNA methyltransferase RsmB/F C1C91_18980 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF C1C91_18990 PF00589 Phage integrase family C1C91_18995 PF01026 TatD related DNase C1C91_19000 PF09115 DNA polymerase III, delta subunit, C terminal C1C91_19005 PF02223 Thymidylate kinase C1C91_19010 PF02618 YceG-like family C1C91_19015 PF01063 Amino-transferase class IV C1C91_19020 PF00109 Beta-ketoacyl synthase, N-terminal domain C1C91_19020 PF02801 Beta-ketoacyl synthase, C-terminal domain C1C91_19025 PF00550 Phosphopantetheine attachment site C1C91_19035 PF00698 Acyl transferase domain C1C91_19040 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C1C91_19040 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C1C91_19045 PF02504 Fatty acid synthesis protein C1C91_19050 PF01783 Ribosomal L32p protein family C1C91_19055 PF02620 Large ribosomal RNA subunit accumulation protein YceD C1C91_19065 PF02545 Maf-like protein C1C91_19070 PF01479 S4 domain C1C91_19070 PF00849 RNA pseudouridylate synthase C1C91_19075 PF10150 Ribonuclease E/G family C1C91_19075 PF12111 Polyribonucleotide phosphorylase C terminal C1C91_19075 PF00575 S1 RNA binding domain C1C91_19080 PF01384 Phosphate transporter family C1C91_19085 PF00692 dUTPase C1C91_19090 PF00485 Phosphoribulokinase / Uridine kinase family C1C91_19095 PF10609 NUBPL iron-transfer P-loop NTPase C1C91_19100 PF09334 tRNA synthetases class I (M) C1C91_19100 PF01588 Putative tRNA binding domain C1C91_19100 PF08264 Anticodon-binding domain of tRNA C1C91_19110 PF00708 Acylphosphatase C1C91_19115 PF00672 HAMP domain C1C91_19115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_19115 PF12729 Four helix bundle sensory module for signal transduction C1C91_19120 PF10672 S-adenosylmethionine-dependent methyltransferase C1C91_19120 PF17785 PUA-like domain C1C91_19135 PF00586 AIR synthase related protein, N-terminal domain C1C91_19135 PF02769 AIR synthase related protein, C-terminal domain C1C91_19145 PF00753 Metallo-beta-lactamase superfamily C1C91_19160 PF07282 Putative transposase DNA-binding domain C1C91_19160 PF01385 Probable transposase C1C91_19160 PF12323 Helix-turn-helix domain C1C91_19175 PF01386 Ribosomal L25p family C1C91_19185 PF04408 Helicase associated domain (HA2) C1C91_19185 PF00271 Helicase conserved C-terminal domain C1C91_19185 PF11898 Domain of unknown function (DUF3418) C1C91_19185 PF00270 DEAD/DEAH box helicase C1C91_19185 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C1C91_19190 PF02272 DHHA1 domain C1C91_19190 PF01368 DHH family C1C91_19190 PF00571 CBS domain C1C91_19190 PF01743 Poly A polymerase head domain C1C91_19195 PF00196 Bacterial regulatory proteins, luxR family C1C91_19195 PF00072 Response regulator receiver domain C1C91_19205 PF05726 Pirin C-terminal cupin domain C1C91_19205 PF02678 Pirin C1C91_19210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_19210 PF03466 LysR substrate binding domain C1C91_19215 PF02575 YbaB/EbfC DNA-binding family C1C91_19225 PF00156 Phosphoribosyl transferase domain C1C91_19230 PF04304 Protein of unknown function (DUF454) C1C91_19235 PF01207 Dihydrouridine synthase (Dus) C1C91_19240 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C1C91_19240 PF02805 Metal binding domain of Ada C1C91_19240 PF12833 Helix-turn-helix domain C1C91_19240 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C1C91_19255 PF01612 3'-5' exonuclease C1C91_19255 PF00570 HRDC domain C1C91_19260 PF00501 AMP-binding enzyme C1C91_19260 PF13193 AMP-binding enzyme C-terminal domain C1C91_19275 PF00814 Glycoprotease family C1C91_19290 PF08029 HisG, C-terminal domain C1C91_19290 PF01634 ATP phosphoribosyltransferase C1C91_19295 PF00815 Histidinol dehydrogenase C1C91_19300 PF00155 Aminotransferase class I and II C1C91_19305 PF00475 Imidazoleglycerol-phosphate dehydratase C1C91_19305 PF08645 Polynucleotide kinase 3 phosphatase C1C91_19310 PF00117 Glutamine amidotransferase class-I C1C91_19315 PF00977 Histidine biosynthesis protein C1C91_19320 PF00072 Response regulator receiver domain C1C91_19330 PF01627 Hpt domain C1C91_19330 PF00512 His Kinase A (phospho-acceptor) domain C1C91_19330 PF00072 Response regulator receiver domain C1C91_19330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_19335 PF00977 Histidine biosynthesis protein C1C91_19340 PF01502 Phosphoribosyl-AMP cyclohydrolase C1C91_19340 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C1C91_19350 PF13280 WYL domain C1C91_19350 PF08279 HTH domain C1C91_19355 PF00501 AMP-binding enzyme C1C91_19355 PF13193 AMP-binding enzyme C-terminal domain C1C91_19360 PF05433 Glycine zipper 2TM domain C1C91_19380 PF00005 ABC transporter C1C91_19385 PF07690 Major Facilitator Superfamily C1C91_19405 PF07152 YaeQ protein C1C91_19420 PF00108 Thiolase, N-terminal domain C1C91_19420 PF02803 Thiolase, C-terminal domain C1C91_19425 PF07726 ATPase family associated with various cellular activities (AAA) C1C91_19425 PF17863 AAA lid domain C1C91_19430 PF01882 Protein of unknown function DUF58 C1C91_19465 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C1C91_19470 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C1C91_19475 PF00563 EAL domain C1C91_19475 PF08668 HDOD domain C1C91_19480 PF02803 Thiolase, C-terminal domain C1C91_19480 PF00108 Thiolase, N-terminal domain C1C91_19485 PF09278 MerR, DNA binding C1C91_19485 PF00376 MerR family regulatory protein C1C91_19490 PF00375 Sodium:dicarboxylate symporter family C1C91_19495 PF06865 Pyrimidine/purine nucleoside phosphorylase C1C91_19500 PF03315 Serine dehydratase beta chain C1C91_19500 PF03313 Serine dehydratase alpha chain C1C91_19510 PF03315 Serine dehydratase beta chain C1C91_19510 PF03313 Serine dehydratase alpha chain C1C91_19525 PF05166 YcgL domain C1C91_19530 PF03775 Septum formation inhibitor MinC, C-terminal domain C1C91_19530 PF05209 Septum formation inhibitor MinC, N-terminal domain C1C91_19535 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C1C91_19545 PF04269 Protein of unknown function, DUF440 C1C91_19550 PF00912 Transglycosylase C1C91_19560 PF04269 Protein of unknown function, DUF440 C1C91_19595 PF02525 Flavodoxin-like fold C1C91_19600 PF00892 EamA-like transporter family C1C91_19605 PF02222 ATP-grasp domain C1C91_19605 PF01370 NAD dependent epimerase/dehydratase family C1C91_19610 PF13419 Haloacid dehalogenase-like hydrolase C1C91_19625 PF00677 Lumazine binding domain C1C91_19630 PF06786 Uncharacterised protein family (UPF0253) C1C91_19635 PF01554 MatE C1C91_19665 PF00136 DNA polymerase family B C1C91_19665 PF03104 DNA polymerase family B, exonuclease domain C1C91_19670 PF02678 Pirin C1C91_19670 PF05726 Pirin C-terminal cupin domain C1C91_19680 PF03279 Bacterial lipid A biosynthesis acyltransferase C1C91_19685 PF03279 Bacterial lipid A biosynthesis acyltransferase C1C91_19695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_19695 PF03466 LysR substrate binding domain C1C91_19700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1C91_19700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C1C91_19705 PF01261 Xylose isomerase-like TIM barrel C1C91_19710 PF00933 Glycosyl hydrolase family 3 N terminal domain C1C91_19720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_19720 PF03466 LysR substrate binding domain C1C91_19730 PF00232 Glycosyl hydrolase family 1 C1C91_19735 PF03466 LysR substrate binding domain C1C91_19735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_19740 PF00990 Diguanylate cyclase, GGDEF domain C1C91_19740 PF00072 Response regulator receiver domain C1C91_19745 PF00384 Molybdopterin oxidoreductase C1C91_19750 PF02634 FdhD/NarQ family C1C91_19760 PF13407 Periplasmic binding protein domain C1C91_19765 PF00005 ABC transporter C1C91_19775 PF00072 Response regulator receiver domain C1C91_19775 PF09308 LuxQ, periplasmic C1C91_19775 PF00512 His Kinase A (phospho-acceptor) domain C1C91_19775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_19780 PF00196 Bacterial regulatory proteins, luxR family C1C91_19780 PF13185 GAF domain C1C91_19785 PF00171 Aldehyde dehydrogenase family C1C91_19790 PF13520 Amino acid permease C1C91_19795 PF00202 Aminotransferase class-III C1C91_19800 PF07687 Peptidase dimerisation domain C1C91_19800 PF01546 Peptidase family M20/M25/M40 C1C91_19810 PF01042 Endoribonuclease L-PSP C1C91_19820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_19820 PF03466 LysR substrate binding domain C1C91_19850 PF02796 Helix-turn-helix domain of resolvase C1C91_19850 PF00239 Resolvase, N terminal domain C1C91_19860 PF04002 RadC-like JAB domain C1C91_19875 PF01695 IstB-like ATP binding protein C1C91_19880 PF00665 Integrase core domain C1C91_19890 PF13592 Winged helix-turn helix C1C91_19890 PF13358 DDE superfamily endonuclease C1C91_19905 PF02384 N-6 DNA Methylase C1C91_19925 PF00589 Phage integrase family C1C91_19925 PF14659 Phage integrase, N-terminal SAM-like domain C1C91_19935 PF01925 Sulfite exporter TauE/SafE C1C91_19950 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C1C91_19950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C1C91_19955 PF00378 Enoyl-CoA hydratase/isomerase C1C91_19960 PF00378 Enoyl-CoA hydratase/isomerase C1C91_19970 PF00171 Aldehyde dehydrogenase family C1C91_19975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1C91_19975 PF02770 Acyl-CoA dehydrogenase, middle domain C1C91_19975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1C91_19980 PF01039 Carboxyl transferase domain C1C91_19985 PF00378 Enoyl-CoA hydratase/isomerase C1C91_19995 PF00682 HMGL-like C1C91_20000 PF00376 MerR family regulatory protein C1C91_20000 PF09278 MerR, DNA binding C1C91_20010 PF01184 GPR1/FUN34/yaaH family C1C91_20015 PF06167 Glucose-regulated metallo-peptidase M90 C1C91_20025 PF01235 Sodium:alanine symporter family C1C91_20030 PF00378 Enoyl-CoA hydratase/isomerase C1C91_20045 PF04341 Protein of unknown function, DUF485 C1C91_20050 PF00474 Sodium:solute symporter family C1C91_20055 PF00005 ABC transporter C1C91_20055 PF12848 ABC transporter C1C91_20060 PF13145 PPIC-type PPIASE domain C1C91_20065 PF00216 Bacterial DNA-binding protein C1C91_20070 PF05362 Lon protease (S16) C-terminal proteolytic domain C1C91_20070 PF00004 ATPase family associated with various cellular activities (AAA) C1C91_20070 PF02190 ATP-dependent protease La (LON) substrate-binding domain C1C91_20075 PF10431 C-terminal, D2-small domain, of ClpB protein C1C91_20075 PF06689 ClpX C4-type zinc finger C1C91_20075 PF07724 AAA domain (Cdc48 subfamily) C1C91_20080 PF00574 Clp protease C1C91_20085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1C91_20085 PF05697 Bacterial trigger factor protein (TF) C1C91_20085 PF05698 Bacterial trigger factor protein (TF) C-terminus C1C91_20105 PF12704 MacB-like periplasmic core domain C1C91_20105 PF02687 FtsX-like permease family C1C91_20110 PF00005 ABC transporter C1C91_20115 PF02687 FtsX-like permease family C1C91_20115 PF12704 MacB-like periplasmic core domain C1C91_20125 PF17757 UvrB interaction domain C1C91_20125 PF03461 TRCF domain C1C91_20125 PF00271 Helicase conserved C-terminal domain C1C91_20125 PF00270 DEAD/DEAH box helicase C1C91_20125 PF02559 CarD-like/TRCF domain C1C91_20130 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C1C91_20135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1C91_20140 PF00892 EamA-like transporter family C1C91_20150 PF00300 Histidine phosphatase superfamily (branch 1) C1C91_20155 PF00675 Insulinase (Peptidase family M16) C1C91_20155 PF16187 Middle or third domain of peptidase_M16 C1C91_20155 PF05193 Peptidase M16 inactive domain C1C91_20170 PF01047 MarR family C1C91_20195 PF01695 IstB-like ATP binding protein C1C91_20200 PF00665 Integrase core domain C1C91_20225 PF00872 Transposase, Mutator family C1C91_20240 PF00809 Pterin binding enzyme C1C91_20255 PF07690 Major Facilitator Superfamily C1C91_20260 PF00440 Bacterial regulatory proteins, tetR family C1C91_20260 PF02909 Tetracyclin repressor-like, C-terminal domain C1C91_20305 PF00809 Pterin binding enzyme C1C91_20325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_20325 PF03466 LysR substrate binding domain C1C91_20330 PF07690 Major Facilitator Superfamily C1C91_20345 PF01526 Tn3 transposase DDE domain C1C91_20345 PF13700 Domain of unknown function (DUF4158) C1C91_20350 PF02796 Helix-turn-helix domain of resolvase C1C91_20350 PF00239 Resolvase, N terminal domain C1C91_20355 PF01636 Phosphotransferase enzyme family C1C91_20360 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase C1C91_20375 PF09278 MerR, DNA binding C1C91_20375 PF00376 MerR family regulatory protein C1C91_20380 PF02411 MerT mercuric transport protein C1C91_20385 PF00403 Heavy-metal-associated domain C1C91_20390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1C91_20390 PF00403 Heavy-metal-associated domain C1C91_20390 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1C91_20395 PF03243 Alkylmercury lyase C1C91_20395 PF12324 Helix-turn-helix domain of alkylmercury lyase C1C91_20400 PF13411 MerR HTH family regulatory protein C1C91_20405 PF05052 MerE protein C1C91_20450 PF17273 Family of unknown function (DUF5338) C1C91_20485 PF00589 Phage integrase family C1C91_20485 PF13356 Arm DNA-binding domain C1C91_20495 PF00117 Glutamine amidotransferase class-I C1C91_20495 PF02540 NAD synthase C1C91_20495 PF00958 GMP synthase C terminal domain C1C91_20500 PF00571 CBS domain C1C91_20500 PF00478 IMP dehydrogenase / GMP reductase domain C1C91_20515 PF01385 Probable transposase C1C91_20515 PF12323 Helix-turn-helix domain C1C91_20515 PF07282 Putative transposase DNA-binding domain C1C91_20535 PF02601 Exonuclease VII, large subunit C1C91_20535 PF13742 OB-fold nucleic acid binding domain C1C91_20545 PF00691 OmpA family C1C91_20555 PF13689 YfiR/HmsC-like C1C91_20565 PF01329 Pterin 4 alpha carbinolamine dehydratase C1C91_20570 PF00351 Biopterin-dependent aromatic amino acid hydroxylase C1C91_20575 PF05128 Domain of unknown function (DUF697) C1C91_20580 PF04317 YcjX-like family, DUF463 C1C91_20590 PF06667 Phage shock protein B C1C91_20595 PF04012 PspA/IM30 family C1C91_20600 PF00158 Sigma-54 interaction domain C1C91_20600 PF02954 Bacterial regulatory protein, Fis family C1C91_20605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1C91_20610 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_20615 PF12911 N-terminal TM domain of oligopeptide transport permease C C1C91_20615 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_20620 PF00005 ABC transporter C1C91_20620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1C91_20625 PF00005 ABC transporter C1C91_20630 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) C1C91_20640 PF01385 Probable transposase C1C91_20640 PF07282 Putative transposase DNA-binding domain C1C91_20640 PF12323 Helix-turn-helix domain C1C91_20655 PF00367 phosphotransferase system, EIIB C1C91_20655 PF02378 Phosphotransferase system, EIIC C1C91_20665 PF00156 Phosphoribosyl transferase domain C1C91_20670 PF02674 Colicin V production protein C1C91_20675 PF02403 Seryl-tRNA synthetase N-terminal domain C1C91_20675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1C91_20680 PF16193 AAA C-terminal domain C1C91_20680 PF12002 MgsA AAA+ ATPase C terminal C1C91_20680 PF00004 ATPase family associated with various cellular activities (AAA) C1C91_20685 PF03548 Outer membrane lipoprotein carrier protein LolA C1C91_20690 PF17854 FtsK alpha domain C1C91_20690 PF09397 Ftsk gamma domain C1C91_20690 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C1C91_20690 PF01580 FtsK/SpoIIIE family C1C91_20695 PF01037 Lrp/AsnC ligand binding domain C1C91_20700 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C1C91_20700 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C1C91_20705 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1C91_20715 PF00990 Diguanylate cyclase, GGDEF domain C1C91_20715 PF05230 MASE2 domain C1C91_20720 PF05433 Glycine zipper 2TM domain C1C91_20725 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C1C91_20730 PF04376 Arginine-tRNA-protein transferase, N terminus C1C91_20730 PF04377 Arginine-tRNA-protein transferase, C terminus C1C91_20735 PF01176 Translation initiation factor 1A / IF-1 C1C91_20740 PF00004 ATPase family associated with various cellular activities (AAA) C1C91_20740 PF07724 AAA domain (Cdc48 subfamily) C1C91_20740 PF10431 C-terminal, D2-small domain, of ClpB protein C1C91_20740 PF02861 Clp amino terminal domain, pathogenicity island component C1C91_20740 PF17871 AAA lid domain C1C91_20745 PF02617 ATP-dependent Clp protease adaptor protein ClpS C1C91_20750 PF00313 'Cold-shock' DNA-binding domain C1C91_20755 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1C91_20755 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1C91_20760 PF00893 Small Multidrug Resistance protein C1C91_20770 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding C1C91_20770 PF18381 YcaO cyclodehydratase C-terminal domain C1C91_20775 PF01226 Formate/nitrite transporter C1C91_20780 PF01228 Glycine radical C1C91_20780 PF02901 Pyruvate formate lyase-like C1C91_20785 PF03692 Putative zinc- or iron-chelating domain C1C91_20795 PF00549 CoA-ligase C1C91_20795 PF02629 CoA binding domain C1C91_20800 PF08442 ATP-grasp domain C1C91_20800 PF00549 CoA-ligase C1C91_20805 PF00364 Biotin-requiring enzyme C1C91_20805 PF02817 e3 binding domain C1C91_20805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1C91_20810 PF16078 2-oxoglutarate dehydrogenase N-terminus C1C91_20810 PF02779 Transketolase, pyrimidine binding domain C1C91_20810 PF16870 2-oxoglutarate dehydrogenase C-terminal C1C91_20810 PF00676 Dehydrogenase E1 component C1C91_20815 PF13085 2Fe-2S iron-sulfur cluster binding domain C1C91_20820 PF02910 Fumarate reductase flavoprotein C-term C1C91_20820 PF00890 FAD binding domain C1C91_20825 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C1C91_20830 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C1C91_20835 PF00285 Citrate synthase, C-terminal domain C1C91_20850 PF00109 Beta-ketoacyl synthase, N-terminal domain C1C91_20850 PF02801 Beta-ketoacyl synthase, C-terminal domain C1C91_20855 PF01266 FAD dependent oxidoreductase C1C91_20855 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C1C91_20865 PF03606 C4-dicarboxylate anaerobic carrier C1C91_20880 PF01863 Protein of unknown function DUF45 C1C91_20895 PF01197 Ribosomal protein L31 C1C91_20900 PF00444 Ribosomal protein L36 C1C91_20905 PF13542 Helix-turn-helix domain of transposase family ISL3 C1C91_20905 PF01610 Transposase C1C91_20905 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C1C91_20910 PF12833 Helix-turn-helix domain C1C91_20910 PF02311 AraC-like ligand binding domain C1C91_20920 PF00005 ABC transporter C1C91_20925 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C1C91_20930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C1C91_20935 PF00596 Class II Aldolase and Adducin N-terminal domain C1C91_20940 PF02610 L-arabinose isomerase C1C91_20940 PF11762 L-arabinose isomerase C-terminal domain C1C91_20945 PF03466 LysR substrate binding domain C1C91_20945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1C91_20950 PF00155 Aminotransferase class I and II C1C91_20955 PF00795 Carbon-nitrogen hydrolase C1C91_20960 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1C91_20970 PF09924 Uncharacterised conserved protein (DUF2156) C1C91_20970 PF03706 Lysylphosphatidylglycerol synthase TM region C1C91_20975 PF00149 Calcineurin-like phosphoesterase C1C91_21000 PF00224 Pyruvate kinase, barrel domain C1C91_21000 PF02887 Pyruvate kinase, alpha/beta domain C1C91_21005 PF07745 Glycosyl hydrolase family 53 C1C91_21010 PF02378 Phosphotransferase system, EIIC C1C91_21010 PF00367 phosphotransferase system, EIIB C1C91_21020 PF07745 Glycosyl hydrolase family 53 C1C91_21025 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_21030 PF00528 Binding-protein-dependent transport system inner membrane component C1C91_21035 PF13416 Bacterial extracellular solute-binding protein C1C91_21040 PF00005 ABC transporter C1C91_21040 PF17912 MalK OB fold domain C1C91_21050 PF01610 Transposase C1C91_21050 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C1C91_21050 PF13542 Helix-turn-helix domain of transposase family ISL3 C1C91_21065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_21065 PF00672 HAMP domain C1C91_21075 PF07745 Glycosyl hydrolase family 53 C1C91_21080 PF02264 LamB porin C1C91_21085 PF00356 Bacterial regulatory proteins, lacI family C1C91_21090 PF16363 GDP-mannose 4,6 dehydratase C1C91_21095 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain C1C91_21095 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain C1C91_21100 PF00288 GHMP kinases N terminal domain C1C91_21100 PF10509 Galactokinase galactose-binding signature C1C91_21100 PF08544 GHMP kinases C terminal C1C91_21110 PF01609 Transposase DDE domain C1C91_21110 PF13808 DDE_Tnp_1-associated C1C91_21165 PF00929 Exonuclease C1C91_21165 PF08411 Exonuclease C-terminal C1C91_21175 PF01609 Transposase DDE domain C1C91_21175 PF13006 Insertion element 4 transposase N-terminal C1C91_21185 PF03788 LrgA family C1C91_21190 PF04172 LrgB-like family C1C91_21200 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region C1C91_21200 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C1C91_21205 PF00501 AMP-binding enzyme C1C91_21210 PF08891 YfcL protein C1C91_21220 PF03741 Integral membrane protein TerC family C1C91_21225 PF13006 Insertion element 4 transposase N-terminal C1C91_21225 PF01609 Transposase DDE domain C1C91_21230 PF00793 DAHP synthetase I family C1C91_21235 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C1C91_21240 PF00266 Aminotransferase class-V C1C91_21245 PF01012 Electron transfer flavoprotein domain C1C91_21245 PF00766 Electron transfer flavoprotein FAD-binding domain C1C91_21250 PF01012 Electron transfer flavoprotein domain C1C91_21265 PF11143 Protein of unknown function (DUF2919) C1C91_21280 PF00593 TonB dependent receptor C1C91_21280 PF07715 TonB-dependent Receptor Plug Domain C1C91_21285 PF01032 FecCD transport family C1C91_21290 PF01032 FecCD transport family C1C91_21295 PF00005 ABC transporter C1C91_21300 PF17837 4'-phosphopantetheinyl transferase N-terminal domain C1C91_21300 PF01648 4'-phosphopantetheinyl transferase superfamily C1C91_21305 PF01497 Periplasmic binding protein C1C91_21310 PF00501 AMP-binding enzyme C1C91_21310 PF00975 Thioesterase domain C1C91_21310 PF00668 Condensation domain C1C91_21310 PF00550 Phosphopantetheine attachment site C1C91_21310 PF13193 AMP-binding enzyme C-terminal domain C1C91_21325 PF00501 AMP-binding enzyme C1C91_21325 PF00668 Condensation domain C1C91_21325 PF13193 AMP-binding enzyme C-terminal domain C1C91_21325 PF00975 Thioesterase domain C1C91_21325 PF00550 Phosphopantetheine attachment site C1C91_21330 PF00857 Isochorismatase family C1C91_21330 PF00550 Phosphopantetheine attachment site C1C91_21340 PF13737 Transposase DDE domain C1C91_21350 PF00425 chorismate binding enzyme C1C91_21355 PF07273 Protein of unknown function (DUF1439) C1C91_21365 PF00483 Nucleotidyl transferase C1C91_21370 PF00563 EAL domain C1C91_21370 PF03707 Bacterial signalling protein N terminal repeat C1C91_21370 PF00990 Diguanylate cyclase, GGDEF domain C1C91_21385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_21385 PF17200 Single Cache domain 2 C1C91_21385 PF00672 HAMP domain C1C91_21390 PF00294 pfkB family carbohydrate kinase C1C91_21395 PF01124 MAPEG family C1C91_21405 PF05191 Adenylate kinase, active site lid C1C91_21410 PF00183 Hsp90 protein C1C91_21410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1C91_21415 PF13662 Toprim domain C1C91_21415 PF02132 RecR protein C1C91_21435 PF02371 Transposase IS116/IS110/IS902 family C1C91_21435 PF01548 Transposase C1C91_21450 PF01740 STAS domain C1C91_21450 PF00916 Sulfate permease family C1C91_21470 PF07282 Putative transposase DNA-binding domain C1C91_21470 PF01385 Probable transposase C1C91_21470 PF12323 Helix-turn-helix domain C1C91_21480 PF14403 Circularly permuted ATP-grasp type 2 C1C91_21480 PF04168 A predicted alpha-helical domain with a conserved ER motif. C1C91_21510 PF03239 Iron permease FTR1 family C1C91_21515 PF01593 Flavin containing amine oxidoreductase C1C91_21535 PF07690 Major Facilitator Superfamily C1C91_21545 PF03600 Citrate transporter C1C91_21555 PF00005 ABC transporter C1C91_21585 PF01565 FAD binding domain C1C91_21585 PF02913 FAD linked oxidases, C-terminal domain C1C91_21590 PF02589 LUD domain C1C91_21595 PF11870 Domain of unknown function (DUF3390) C1C91_21595 PF02589 LUD domain C1C91_21595 PF13183 4Fe-4S dicluster domain C1C91_21600 PF02754 Cysteine-rich domain C1C91_21605 PF02652 L-lactate permease C1C91_21635 PF01625 Peptide methionine sulfoxide reductase C1C91_21640 PF00583 Acetyltransferase (GNAT) family C1C91_21640 PF00696 Amino acid kinase family C1C91_21645 PF01842 ACT domain C1C91_21645 PF00696 Amino acid kinase family C1C91_21660 PF01906 Putative heavy-metal-binding C1C91_21665 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1C91_21670 PF05728 Uncharacterised protein family (UPF0227) C1C91_21695 PF13426 PAS domain C1C91_21695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_21695 PF08447 PAS fold C1C91_21700 PF02355 Protein export membrane protein C1C91_21700 PF07549 SecD/SecF GG Motif C1C91_21740 PF01230 HIT domain C1C91_21745 PF00672 HAMP domain C1C91_21745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1C91_21755 PF02384 N-6 DNA Methylase C1C91_21775 PF01979 Amidohydrolase family C1C91_21795 PF00375 Sodium:dicarboxylate symporter family C1C91_21805 PF00842 Alanine racemase, C-terminal domain C1C91_21805 PF01168 Alanine racemase, N-terminal domain C1C91_21810 PF03741 Integral membrane protein TerC family C1C91_21815 PF00005 ABC transporter C1C91_21815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1C91_21820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1C91_21820 PF00005 ABC transporter C1C91_21935 PF00294 pfkB family carbohydrate kinase C1C91_22015 PF06005 Cell division protein ZapB C1C91_22175 PF02653 Branched-chain amino acid transport system / permease component C1C91_22305 PF02321 Outer membrane efflux protein C1C91_22310 PF00873 AcrB/AcrD/AcrF family C1C91_22315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1C91_22315 PF00529 HlyD membrane-fusion protein of T1SS C1C91_22335 PF13700 Domain of unknown function (DUF4158) C1C91_22335 PF01526 Tn3 transposase DDE domain C1C91_22345 PF00589 Phage integrase family C1C91_22345 PF13495 Phage integrase, N-terminal SAM-like domain C1C91_22365 PF02384 N-6 DNA Methylase C1C91_22375 PF00905 Penicillin binding protein transpeptidase domain C1C91_22380 PF00132 Bacterial transferase hexapeptide (six repeats) C1C91_22390 PF00893 Small Multidrug Resistance protein C1C91_22395 PF00809 Pterin binding enzyme C1C91_22410 PF13610 DDE domain C1C91_22415 PF00239 Resolvase, N terminal domain C1C91_22415 PF02796 Helix-turn-helix domain of resolvase C1C91_22420 PF07690 Major Facilitator Superfamily C1C91_22425 PF00440 Bacterial regulatory proteins, tetR family C1C91_22425 PF02909 Tetracyclin repressor-like, C-terminal domain C1C91_22435 PF01526 Tn3 transposase DDE domain C1C91_22435 PF13700 Domain of unknown function (DUF4158) C1C91_22440 PF02796 Helix-turn-helix domain of resolvase C1C91_22440 PF00239 Resolvase, N terminal domain C1C91_22445 PF00990 Diguanylate cyclase, GGDEF domain C1C91_22445 PF03707 Bacterial signalling protein N terminal repeat C1C91_22445 PF00563 EAL domain C1C91_22450 PF05052 MerE protein C1C91_22455 PF13411 MerR HTH family regulatory protein C1C91_22460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1C91_22460 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1C91_22460 PF00403 Heavy-metal-associated domain C1C91_22465 PF00403 Heavy-metal-associated domain C1C91_22470 PF02411 MerT mercuric transport protein C1C91_22475 PF00376 MerR family regulatory protein C1C91_22475 PF09278 MerR, DNA binding C1C91_22485 PF01636 Phosphotransferase enzyme family C1C91_22490 PF00239 Resolvase, N terminal domain C1C91_22490 PF02796 Helix-turn-helix domain of resolvase C1C91_22500 PF03050 Transposase IS66 family C1C91_22500 PF13817 IS66 C-terminal element C1C91_22500 PF13007 Transposase C of IS166 homeodomain C1C91_22500 PF13005 zinc-finger binding domain of transposase IS66 C1C91_22515 PF01966 HD domain C1C91_22515 PF11871 Domain of unknown function (DUF3391) C1C91_22545 PF02796 Helix-turn-helix domain of resolvase C1C91_22545 PF00239 Resolvase, N terminal domain C1C91_22580 PF05717 IS66 Orf2 like protein C1C91_22585 PF13005 zinc-finger binding domain of transposase IS66 C1C91_22585 PF13007 Transposase C of IS166 homeodomain C1C91_22585 PF13817 IS66 C-terminal element C1C91_22585 PF03050 Transposase IS66 family C1C91_22700 PF00563 EAL domain C1C91_22700 PF00196 Bacterial regulatory proteins, luxR family C1C91_22710 PF02384 N-6 DNA Methylase C1C91_22715 PF06250 YhcG PDDEXK nuclease domain C1C91_22715 PF17761 DUF1016 N-terminal domain C1C91_22725 PF11867 Domain of unknown function (DUF3387) C1C91_22725 PF18766 SWI2/SNF2 ATPase C1C91_22725 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C1C91_22785 PF18607 ParA helix turn helix domain C1C91_22785 PF13614 AAA domain C1C91_22825 PF00712 DNA polymerase III beta subunit, N-terminal domain C1C91_22825 PF02768 DNA polymerase III beta subunit, C-terminal domain C1C91_22825 PF02767 DNA polymerase III beta subunit, central domain C1C91_22830 PF02195 ParB-like nuclease domain C1C91_22830 PF17762 HTH domain found in ParB protein C1C91_22845 PF03050 Transposase IS66 family C1C91_22845 PF13817 IS66 C-terminal element C1C91_22845 PF13005 zinc-finger binding domain of transposase IS66 C1C91_22845 PF13007 Transposase C of IS166 homeodomain C1C91_22865 PF00816 H-NS histone family C1C91_22890 PF07655 Secretin N-terminal domain C1C91_22890 PF00263 Bacterial type II and III secretion system protein C1C91_22905 PF00437 Type II/IV secretion system protein C1C91_23130 PF13358 DDE superfamily endonuclease C1C91_23130 PF13592 Winged helix-turn helix C1C91_23145 PF11740 Plasmid replication region DNA-binding N-term C1C91_23150 PF00589 Phage integrase family C1C91_23150 PF02899 Phage integrase, N-terminal SAM-like domain C1C91_23255 PF02321 Outer membrane efflux protein C1C91_23305 PF00239 Resolvase, N terminal domain C1C91_23305 PF02796 Helix-turn-helix domain of resolvase C1C91_23320 PF02909 Tetracyclin repressor-like, C-terminal domain C1C91_23320 PF00440 Bacterial regulatory proteins, tetR family C1C91_23325 PF07690 Major Facilitator Superfamily C1C91_23345 PF02796 Helix-turn-helix domain of resolvase C1C91_23345 PF00239 Resolvase, N terminal domain C1C91_23350 PF13610 DDE domain C1C91_23365 PF00809 Pterin binding enzyme C1C91_23370 PF00893 Small Multidrug Resistance protein C1C91_23375 PF13427 Domain of unknown function (DUF4111) C1C91_23375 PF01909 Nucleotidyltransferase domain C1C91_23380 PF00132 Bacterial transferase hexapeptide (six repeats) C1C91_23385 PF06442 R67 dihydrofolate reductase C1C91_23390 PF00589 Phage integrase family C1C91_23390 PF13495 Phage integrase, N-terminal SAM-like domain C1C91_23395 PF02796 Helix-turn-helix domain of resolvase C1C91_23395 PF00239 Resolvase, N terminal domain C1C91_23400 PF13700 Domain of unknown function (DUF4158) C1C91_23400 PF01526 Tn3 transposase DDE domain C1C91_23425 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system C1C91_23430 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C1C91_23510 PF13614 AAA domain C1C91_23565 PF04002 RadC-like JAB domain C1C91_23595 PF08401 Domain of unknown function (DUF1738) C1C91_23595 PF18818 Metallopeptidase superfamily domain C1C91_23660 PF12615 F sex factor protein N terminal C1C91_23660 PF10412 Type IV secretion-system coupling protein DNA-binding domain C1C91_23665 PF18272 single-stranded DNA binding TraI N-terminal subdomain C1C91_23665 PF18340 DNA relaxase TraI 2B/2B-like domain C1C91_23665 PF08751 TrwC relaxase C1C91_23665 PF07057 DNA helicase TraI C1C91_23765 PF00872 Transposase, Mutator family