locus-tag class description FCM34_00005 PF08299 Bacterial dnaA protein helix-turn-helix FCM34_00005 PF00308 Bacterial dnaA protein FCM34_00005 PF11638 DnaA N-terminal domain FCM34_00010 PF02767 DNA polymerase III beta subunit, central domain FCM34_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain FCM34_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain FCM34_00015 PF02463 RecF/RecN/SMC N terminal domain FCM34_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_00020 PF18053 DNA gyrase B subunit insert domain FCM34_00020 PF00204 DNA gyrase B FCM34_00020 PF00986 DNA gyrase B subunit, carboxyl terminus FCM34_00020 PF01751 Toprim domain FCM34_00030 PF08279 HTH domain FCM34_00030 PF13280 WYL domain FCM34_00035 PF00011 Hsp20/alpha crystallin family FCM34_00040 PF00011 Hsp20/alpha crystallin family FCM34_00045 PF00155 Aminotransferase class I and II FCM34_00060 PF07690 Major Facilitator Superfamily FCM34_00065 PF00072 Response regulator receiver domain FCM34_00065 PF00486 Transcriptional regulatory protein, C terminal FCM34_00070 PF02702 Osmosensitive K+ channel His kinase sensor domain FCM34_00070 PF13493 Domain of unknown function (DUF4118) FCM34_00070 PF13492 GAF domain FCM34_00070 PF00512 His Kinase A (phospho-acceptor) domain FCM34_00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_00075 PF02669 K+-transporting ATPase, c chain FCM34_00085 PF03814 Potassium-transporting ATPase A subunit FCM34_00095 PF05598 Transposase domain (DUF772) FCM34_00095 PF01609 Transposase DDE domain FCM34_00100 PF01381 Helix-turn-helix FCM34_00105 PF13592 Winged helix-turn helix FCM34_00105 PF13358 DDE superfamily endonuclease FCM34_00115 PF01420 Type I restriction modification DNA specificity domain FCM34_00120 PF13737 Transposase DDE domain FCM34_00125 PF02384 N-6 DNA Methylase FCM34_00150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FCM34_00150 PF07992 Pyridine nucleotide-disulphide oxidoreductase FCM34_00155 PF00497 Bacterial extracellular solute-binding proteins, family 3 FCM34_00155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_00155 PF00512 His Kinase A (phospho-acceptor) domain FCM34_00160 PF00873 AcrB/AcrD/AcrF family FCM34_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FCM34_00170 PF00440 Bacterial regulatory proteins, tetR family FCM34_00205 PF12146 Serine aminopeptidase, S33 FCM34_00210 PF00588 SpoU rRNA Methylase family FCM34_00210 PF12105 SpoU, rRNA methylase, C-terminal FCM34_00215 PF13291 ACT domain FCM34_00215 PF02824 TGS domain FCM34_00215 PF04607 Region found in RelA / SpoT proteins FCM34_00220 PF01192 RNA polymerase Rpb6 FCM34_00225 PF00625 Guanylate kinase FCM34_00235 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FCM34_00250 PF00892 EamA-like transporter family FCM34_00270 PF03466 LysR substrate binding domain FCM34_00270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_00275 PF00579 tRNA synthetases class I (W and Y) FCM34_00280 PF00582 Universal stress protein family FCM34_00285 PF12241 Trans-2-enoyl-CoA reductase catalytic region FCM34_00285 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FCM34_00285 PF07055 Enoyl reductase FAD binding domain FCM34_00290 PF05230 MASE2 domain FCM34_00290 PF00990 Diguanylate cyclase, GGDEF domain FCM34_00295 PF00210 Ferritin-like domain FCM34_00305 PF07690 Major Facilitator Superfamily FCM34_00310 PF01810 LysE type translocator FCM34_00330 PF05598 Transposase domain (DUF772) FCM34_00330 PF01609 Transposase DDE domain FCM34_00345 PF07694 5TMR of 5TMR-LYT FCM34_00345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_00345 PF06580 Histidine kinase FCM34_00350 PF00072 Response regulator receiver domain FCM34_00350 PF04397 LytTr DNA-binding domain FCM34_00355 PF07690 Major Facilitator Superfamily FCM34_00365 PF02371 Transposase IS116/IS110/IS902 family FCM34_00365 PF01548 Transposase FCM34_00370 PF02222 ATP-grasp domain FCM34_00370 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FCM34_00375 PF00731 AIR carboxylase FCM34_00380 PF00593 TonB dependent receptor FCM34_00380 PF07715 TonB-dependent Receptor Plug Domain FCM34_00385 PF01177 Asp/Glu/Hydantoin racemase FCM34_00420 PF13607 Succinyl-CoA ligase like flavodoxin domain FCM34_00420 PF13380 CoA binding domain FCM34_00420 PF00583 Acetyltransferase (GNAT) family FCM34_00430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_00430 PF03466 LysR substrate binding domain FCM34_00435 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FCM34_00435 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FCM34_00440 PF00342 Phosphoglucose isomerase FCM34_00450 PF00924 Mechanosensitive ion channel FCM34_00450 PF05552 Conserved TM helix FCM34_00460 PF00440 Bacterial regulatory proteins, tetR family FCM34_00465 PF00692 dUTPase FCM34_00470 PF04127 DNA / pantothenate metabolism flavoprotein FCM34_00470 PF02441 Flavoprotein FCM34_00475 PF04002 RadC-like JAB domain FCM34_00480 PF00830 Ribosomal L28 family FCM34_00485 PF00471 Ribosomal protein L33 FCM34_00495 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FCM34_00495 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FCM34_00495 PF06827 Zinc finger found in FPG and IleRS FCM34_00500 PF04393 Protein of unknown function (DUF535) FCM34_00505 PF01467 Cytidylyltransferase-like FCM34_00510 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FCM34_00515 PF00535 Glycosyl transferase family 2 FCM34_00520 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FCM34_00525 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FCM34_00535 PF08340 Domain of unknown function (DUF1732) FCM34_00535 PF03755 YicC-like family, N-terminal region FCM34_00540 PF01138 3' exoribonuclease family, domain 1 FCM34_00540 PF03725 3' exoribonuclease family, domain 2 FCM34_00545 PF00156 Phosphoribosyl transferase domain FCM34_00550 PF00403 Heavy-metal-associated domain FCM34_00555 PF00376 MerR family regulatory protein FCM34_00555 PF09278 MerR, DNA binding FCM34_00560 PF00360 Phytochrome region FCM34_00560 PF00563 EAL domain FCM34_00560 PF01590 GAF domain FCM34_00560 PF00990 Diguanylate cyclase, GGDEF domain FCM34_00565 PF06288 Protein of unknown function (DUF1040) FCM34_00570 PF12801 4Fe-4S binding domain FCM34_00570 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FCM34_00570 PF13746 4Fe-4S dicluster domain FCM34_00575 PF01636 Phosphotransferase enzyme family FCM34_00580 PF01323 DSBA-like thioredoxin domain FCM34_00585 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_00590 PF00005 ABC transporter FCM34_00600 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FCM34_00600 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FCM34_00605 PF00857 Isochorismatase family FCM34_00620 PF04463 Protein of unknown function (DUF523) FCM34_00625 PF01553 Acyltransferase FCM34_00630 PF01553 Acyltransferase FCM34_00635 PF13335 Magnesium chelatase, subunit ChlI C-terminal FCM34_00635 PF01078 Magnesium chelatase, subunit ChlI FCM34_00645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FCM34_00645 PF00205 Thiamine pyrophosphate enzyme, central domain FCM34_00645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FCM34_00655 PF01063 Amino-transferase class IV FCM34_00660 PF00920 Dehydratase family FCM34_00665 PF00585 C-terminal regulatory domain of Threonine dehydratase FCM34_00665 PF00291 Pyridoxal-phosphate dependent enzyme FCM34_00670 PF01389 OmpA-like transmembrane domain FCM34_00670 PF00691 OmpA family FCM34_00680 PF00440 Bacterial regulatory proteins, tetR family FCM34_00685 PF17764 3′ DNA-binding domain (3′BD) FCM34_00685 PF18074 Primosomal protein N C-terminal domain FCM34_00685 PF00270 DEAD/DEAH box helicase FCM34_00685 PF00271 Helicase conserved C-terminal domain FCM34_00685 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FCM34_00690 PF01197 Ribosomal protein L31 FCM34_00695 PF11066 Protein of unknown function (DUF2867) FCM34_00695 PF13460 NAD(P)H-binding FCM34_00700 PF03949 Malic enzyme, NAD binding domain FCM34_00700 PF00390 Malic enzyme, N-terminal domain FCM34_00710 PF00672 HAMP domain FCM34_00710 PF00512 His Kinase A (phospho-acceptor) domain FCM34_00710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_00725 PF00072 Response regulator receiver domain FCM34_00725 PF00486 Transcriptional regulatory protein, C terminal FCM34_00730 PF05958 tRNA (Uracil-5-)-methyltransferase FCM34_00745 PF00128 Alpha amylase, catalytic domain FCM34_00745 PF02903 Alpha amylase, N-terminal ig-like domain FCM34_00760 PF00012 Hsp70 protein FCM34_00765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FCM34_00765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FCM34_00770 PF05981 CreA protein FCM34_00785 PF01258 Prokaryotic dksA/traR C4-type zinc finger FCM34_00790 PF00120 Glutamine synthetase, catalytic domain FCM34_00795 PF00202 Aminotransferase class-III FCM34_00800 PF13416 Bacterial extracellular solute-binding protein FCM34_00805 PF13416 Bacterial extracellular solute-binding protein FCM34_00810 PF08402 TOBE domain FCM34_00810 PF00005 ABC transporter FCM34_00815 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_00820 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_00825 PF03475 3-alpha domain FCM34_00825 PF03473 MOSC domain FCM34_00840 PF03061 Thioesterase superfamily FCM34_00845 PF00570 HRDC domain FCM34_00845 PF09382 RQC domain FCM34_00845 PF00271 Helicase conserved C-terminal domain FCM34_00845 PF00270 DEAD/DEAH box helicase FCM34_00845 PF16124 RecQ zinc-binding FCM34_00850 PF00034 Cytochrome c FCM34_00855 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FCM34_00865 PF02592 Putative vitamin uptake transporter FCM34_00870 PF03737 Aldolase/RraA FCM34_00875 PF01769 Divalent cation transporter FCM34_00875 PF03448 MgtE intracellular N domain FCM34_00875 PF00571 CBS domain FCM34_00880 PF10414 Sirohaem synthase dimerisation region FCM34_00880 PF14824 Sirohaem biosynthesis protein central FCM34_00880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FCM34_00885 PF01226 Formate/nitrite transporter FCM34_00890 PF13806 Rieske-like [2Fe-2S] domain FCM34_00895 PF18267 Rubredoxin NAD+ reductase C-terminal domain FCM34_00895 PF07992 Pyridine nucleotide-disulphide oxidoreductase FCM34_00895 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FCM34_00895 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FCM34_00895 PF04324 BFD-like [2Fe-2S] binding domain FCM34_00910 PF00005 ABC transporter FCM34_00915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FCM34_00935 PF00004 ATPase family associated with various cellular activities (AAA) FCM34_00935 PF10431 C-terminal, D2-small domain, of ClpB protein FCM34_00935 PF07724 AAA domain (Cdc48 subfamily) FCM34_00940 PF00227 Proteasome subunit FCM34_00950 PF00750 tRNA synthetases class I (R) FCM34_00950 PF03485 Arginyl tRNA synthetase N terminal domain FCM34_00950 PF05746 DALR anticodon binding domain FCM34_00960 PF04542 Sigma-70 region 2 FCM34_00960 PF04545 Sigma-70, region 4 FCM34_00965 PF12973 ChrR Cupin-like domain FCM34_00970 PF02673 Bacitracin resistance protein BacA FCM34_00975 PF00248 Aldo/keto reductase family FCM34_00980 PF01263 Aldose 1-epimerase FCM34_00985 PF08544 GHMP kinases C terminal FCM34_00985 PF10509 Galactokinase galactose-binding signature FCM34_00985 PF00288 GHMP kinases N terminal domain FCM34_00990 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FCM34_00990 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FCM34_00995 PF16363 GDP-mannose 4,6 dehydratase FCM34_01000 PF00356 Bacterial regulatory proteins, lacI family FCM34_01005 PF02929 Beta galactosidase small chain FCM34_01005 PF00703 Glycosyl hydrolases family 2 FCM34_01005 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FCM34_01005 PF02837 Glycosyl hydrolases family 2, sugar binding domain FCM34_01005 PF16353 Domain of unknown function(DUF4981) FCM34_01010 PF13407 Periplasmic binding protein domain FCM34_01015 PF00005 ABC transporter FCM34_01020 PF02653 Branched-chain amino acid transport system / permease component FCM34_01025 PF00672 HAMP domain FCM34_01025 PF02743 Cache domain FCM34_01025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_01045 PF00696 Amino acid kinase family FCM34_01050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FCM34_01050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FCM34_01055 PF03606 C4-dicarboxylate anaerobic carrier FCM34_01060 PF01316 Arginine repressor, DNA binding domain FCM34_01060 PF02863 Arginine repressor, C-terminal domain FCM34_01065 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain FCM34_01065 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain FCM34_01070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FCM34_01070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FCM34_01095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_01095 PF00672 HAMP domain FCM34_01095 PF02743 Cache domain FCM34_01105 PF08212 Lipocalin-like domain FCM34_01110 PF12833 Helix-turn-helix domain FCM34_01110 PF06719 AraC-type transcriptional regulator N-terminus FCM34_01115 PF00465 Iron-containing alcohol dehydrogenase FCM34_01120 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FCM34_01120 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FCM34_01120 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FCM34_01125 PF02233 NAD(P) transhydrogenase beta subunit FCM34_01130 PF08348 YheO-like PAS domain FCM34_01130 PF13309 HTH domain FCM34_01135 PF03313 Serine dehydratase alpha chain FCM34_01140 PF13525 Outer membrane lipoprotein FCM34_01145 PF00849 RNA pseudouridylate synthase FCM34_01145 PF01479 S4 domain FCM34_01155 PF10431 C-terminal, D2-small domain, of ClpB protein FCM34_01155 PF02861 Clp amino terminal domain, pathogenicity island component FCM34_01155 PF17871 AAA lid domain FCM34_01155 PF00004 ATPase family associated with various cellular activities (AAA) FCM34_01155 PF07724 AAA domain (Cdc48 subfamily) FCM34_01165 PF03590 Aspartate-ammonia ligase FCM34_01170 PF01037 Lrp/AsnC ligand binding domain FCM34_01180 PF00478 IMP dehydrogenase / GMP reductase domain FCM34_01180 PF00571 CBS domain FCM34_01200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_01200 PF00512 His Kinase A (phospho-acceptor) domain FCM34_01210 PF00072 Response regulator receiver domain FCM34_01210 PF00158 Sigma-54 interaction domain FCM34_01215 PF06496 Protein of unknown function (DUF1097) FCM34_01225 PF00174 Oxidoreductase molybdopterin binding domain FCM34_01230 PF01794 Ferric reductase like transmembrane component FCM34_01245 PF00072 Response regulator receiver domain FCM34_01245 PF00486 Transcriptional regulatory protein, C terminal FCM34_01250 PF08918 PhoQ Sensor FCM34_01250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_01260 PF01568 Molydopterin dinucleotide binding domain FCM34_01260 PF18364 Molybdopterin oxidoreductase N-terminal domain FCM34_01260 PF00384 Molybdopterin oxidoreductase FCM34_01265 PF03264 NapC/NirT cytochrome c family, N-terminal region FCM34_01270 PF01751 Toprim domain FCM34_01270 PF01131 DNA topoisomerase FCM34_01275 PF02386 Cation transport protein FCM34_01280 PF02254 TrkA-N domain FCM34_01280 PF02080 TrkA-C domain FCM34_01285 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FCM34_01285 PF01565 FAD binding domain FCM34_01290 PF02237 Biotin protein ligase C terminal domain FCM34_01290 PF03099 Biotin/lipoate A/B protein ligase family FCM34_01290 PF08279 HTH domain FCM34_01295 PF00485 Phosphoribulokinase / Uridine kinase family FCM34_01310 PF03144 Elongation factor Tu domain 2 FCM34_01310 PF03143 Elongation factor Tu C-terminal domain FCM34_01310 PF00009 Elongation factor Tu GTP binding domain FCM34_01320 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FCM34_01325 PF02357 Transcription termination factor nusG FCM34_01325 PF00467 KOW motif FCM34_01330 PF00298 Ribosomal protein L11, RNA binding domain FCM34_01330 PF03946 Ribosomal protein L11, N-terminal domain FCM34_01335 PF00687 Ribosomal protein L1p/L10e family FCM34_01340 PF00466 Ribosomal protein L10 FCM34_01345 PF00542 Ribosomal protein L7/L12 C-terminal domain FCM34_01345 PF16320 Ribosomal protein L7/L12 dimerisation domain FCM34_01350 PF04563 RNA polymerase beta subunit FCM34_01350 PF04565 RNA polymerase Rpb2, domain 3 FCM34_01350 PF10385 RNA polymerase beta subunit external 1 domain FCM34_01350 PF00562 RNA polymerase Rpb2, domain 6 FCM34_01350 PF04560 RNA polymerase Rpb2, domain 7 FCM34_01350 PF04561 RNA polymerase Rpb2, domain 2 FCM34_01355 PF04998 RNA polymerase Rpb1, domain 5 FCM34_01355 PF05000 RNA polymerase Rpb1, domain 4 FCM34_01355 PF04983 RNA polymerase Rpb1, domain 3 FCM34_01355 PF00623 RNA polymerase Rpb1, domain 2 FCM34_01355 PF04997 RNA polymerase Rpb1, domain 1 FCM34_01360 PF13309 HTH domain FCM34_01360 PF08348 YheO-like PAS domain FCM34_01365 PF01042 Endoribonuclease L-PSP FCM34_01370 PF02635 DsrE/DsrF-like family FCM34_01375 PF02635 DsrE/DsrF-like family FCM34_01380 PF04077 DsrH like protein FCM34_01385 PF00164 Ribosomal protein S12/S23 FCM34_01390 PF00177 Ribosomal protein S7p/S5e FCM34_01395 PF14492 Elongation Factor G, domain II FCM34_01395 PF00679 Elongation factor G C-terminus FCM34_01395 PF03764 Elongation factor G, domain IV FCM34_01395 PF00009 Elongation factor Tu GTP binding domain FCM34_01395 PF03144 Elongation factor Tu domain 2 FCM34_01400 PF03144 Elongation factor Tu domain 2 FCM34_01400 PF03143 Elongation factor Tu C-terminal domain FCM34_01400 PF00009 Elongation factor Tu GTP binding domain FCM34_01440 PF03079 ARD/ARD' family FCM34_01445 PF00860 Permease family FCM34_01450 PF02733 Dak1 domain FCM34_01455 PF02734 DAK2 domain FCM34_01460 PF00381 PTS HPr component phosphorylation site FCM34_01460 PF05524 PEP-utilising enzyme, N-terminal FCM34_01460 PF00391 PEP-utilising enzyme, mobile domain FCM34_01460 PF03610 PTS system fructose IIA component FCM34_01465 PF02954 Bacterial regulatory protein, Fis family FCM34_01465 PF00989 PAS fold FCM34_01465 PF00158 Sigma-54 interaction domain FCM34_01470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_01470 PF03466 LysR substrate binding domain FCM34_01475 PF04371 Porphyromonas-type peptidyl-arginine deiminase FCM34_01480 PF00795 Carbon-nitrogen hydrolase FCM34_01485 PF13416 Bacterial extracellular solute-binding protein FCM34_01490 PF04371 Porphyromonas-type peptidyl-arginine deiminase FCM34_01495 PF00106 short chain dehydrogenase FCM34_01500 PF01594 AI-2E family transporter FCM34_01505 PF00293 NUDIX domain FCM34_01525 PF06628 Catalase-related immune-responsive FCM34_01525 PF00199 Catalase FCM34_01530 PF00583 Acetyltransferase (GNAT) family FCM34_01550 PF00990 Diguanylate cyclase, GGDEF domain FCM34_01550 PF00072 Response regulator receiver domain FCM34_01560 PF08402 TOBE domain FCM34_01560 PF00005 ABC transporter FCM34_01570 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_01585 PF07702 UTRA domain FCM34_01585 PF00392 Bacterial regulatory proteins, gntR family FCM34_01595 PF03466 LysR substrate binding domain FCM34_01595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_01605 PF17954 Quercetinase C-terminal cupin domain FCM34_01605 PF02678 Pirin FCM34_01610 PF07681 DoxX FCM34_01615 PF17946 RecC C-terminal domain FCM34_01620 PF12705 PD-(D/E)XK nuclease superfamily FCM34_01620 PF00580 UvrD/REP helicase N-terminal domain FCM34_01620 PF13361 UvrD-like helicase C-terminal domain FCM34_01625 PF13538 UvrD-like helicase C-terminal domain FCM34_01630 PF01966 HD domain FCM34_01630 PF13286 Phosphohydrolase-associated domain FCM34_01640 PF00909 Ammonium Transporter Family FCM34_01645 PF00543 Nitrogen regulatory protein P-II FCM34_01650 PF00990 Diguanylate cyclase, GGDEF domain FCM34_01650 PF08448 PAS fold FCM34_01660 PF00672 HAMP domain FCM34_01660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_01670 PF00486 Transcriptional regulatory protein, C terminal FCM34_01670 PF00072 Response regulator receiver domain FCM34_01675 PF00512 His Kinase A (phospho-acceptor) domain FCM34_01675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_01675 PF00672 HAMP domain FCM34_01680 PF00313 'Cold-shock' DNA-binding domain FCM34_01710 PF00239 Resolvase, N terminal domain FCM34_01710 PF02796 Helix-turn-helix domain of resolvase FCM34_01715 PF01636 Phosphotransferase enzyme family FCM34_01725 PF13495 Phage integrase, N-terminal SAM-like domain FCM34_01725 PF00589 Phage integrase family FCM34_01730 PF13599 Pentapeptide repeats (9 copies) FCM34_01745 PF07690 Major Facilitator Superfamily FCM34_01750 PF00905 Penicillin binding protein transpeptidase domain FCM34_01760 PF13427 Domain of unknown function (DUF4111) FCM34_01760 PF01909 Nucleotidyltransferase domain FCM34_01765 PF00186 Dihydrofolate reductase FCM34_01780 PF13610 DDE domain FCM34_01820 PF00004 ATPase family associated with various cellular activities (AAA) FCM34_01820 PF07724 AAA domain (Cdc48 subfamily) FCM34_01835 PF00809 Pterin binding enzyme FCM34_01875 PF01695 IstB-like ATP binding protein FCM34_01880 PF00665 Integrase core domain FCM34_01890 PF13538 UvrD-like helicase C-terminal domain FCM34_01915 PF00589 Phage integrase family FCM34_01915 PF02899 Phage integrase, N-terminal SAM-like domain FCM34_01920 PF00436 Single-strand binding protein family FCM34_01925 PF00196 Bacterial regulatory proteins, luxR family FCM34_01930 PF00005 ABC transporter FCM34_01930 PF17755 UvrA DNA-binding domain FCM34_01930 PF17760 UvrA interaction domain FCM34_01935 PF03922 OmpW family FCM34_01940 PF12729 Four helix bundle sensory module for signal transduction FCM34_01940 PF00672 HAMP domain FCM34_01940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_01955 PF02219 Methylenetetrahydrofolate reductase FCM34_01965 PF03594 Benzoate membrane transport protein FCM34_01970 PF01381 Helix-turn-helix FCM34_01970 PF07883 Cupin domain FCM34_02000 PF04363 Protein of unknown function (DUF496) FCM34_02010 PF04751 Protein of unknown function (DUF615) FCM34_02015 PF01523 Putative modulator of DNA gyrase FCM34_02020 PF07219 HemY protein N-terminus FCM34_02020 PF07719 Tetratricopeptide repeat FCM34_02025 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase FCM34_02030 PF02602 Uroporphyrinogen-III synthase HemD FCM34_02035 PF03900 Porphobilinogen deaminase, C-terminal domain FCM34_02035 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FCM34_02040 PF01295 Adenylate cyclase, class-I FCM34_02040 PF12633 Adenylate cyclase NT domain FCM34_02045 PF02230 Phospholipase/Carboxylesterase FCM34_02050 PF01491 Frataxin-like domain FCM34_02060 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FCM34_02060 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FCM34_02065 PF01678 Diaminopimelate epimerase FCM34_02075 PF00589 Phage integrase family FCM34_02075 PF02899 Phage integrase, N-terminal SAM-like domain FCM34_02080 PF13419 Haloacid dehalogenase-like hydrolase FCM34_02090 PF07722 Peptidase C26 FCM34_02105 PF04307 LexA-binding, inner membrane-associated putative hydrolase FCM34_02110 PF00994 Probable molybdopterin binding domain FCM34_02110 PF02464 Competence-damaged protein FCM34_02120 PF04204 Homoserine O-succinyltransferase FCM34_02130 PF01037 Lrp/AsnC ligand binding domain FCM34_02135 PF00884 Sulfatase FCM34_02145 PF00128 Alpha amylase, catalytic domain FCM34_02145 PF02903 Alpha amylase, N-terminal ig-like domain FCM34_02145 PF16657 Maltogenic Amylase, C-terminal domain FCM34_02150 PF02308 MgtC family FCM34_02170 PF00106 short chain dehydrogenase FCM34_02185 PF00465 Iron-containing alcohol dehydrogenase FCM34_02195 PF01053 Cys/Met metabolism PLP-dependent enzyme FCM34_02205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FCM34_02205 PF12793 Sugar transport-related sRNA regulator N-term FCM34_02225 PF00561 alpha/beta hydrolase fold FCM34_02235 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FCM34_02235 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FCM34_02240 PF02698 DUF218 domain FCM34_02245 PF01752 Collagenase FCM34_02245 PF08453 Peptidase family M9 N-terminal FCM34_02250 PF00501 AMP-binding enzyme FCM34_02250 PF13193 AMP-binding enzyme C-terminal domain FCM34_02255 PF13378 Enolase C-terminal domain-like FCM34_02260 PF00378 Enoyl-CoA hydratase/isomerase FCM34_02265 PF12697 Alpha/beta hydrolase family FCM34_02270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FCM34_02270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FCM34_02270 PF16582 Middle domain of thiamine pyrophosphate FCM34_02275 PF00425 chorismate binding enzyme FCM34_02280 PF01040 UbiA prenyltransferase family FCM34_02300 PF00271 Helicase conserved C-terminal domain FCM34_02300 PF00270 DEAD/DEAH box helicase FCM34_02300 PF03880 DbpA RNA binding domain FCM34_02305 PF01609 Transposase DDE domain FCM34_02305 PF05598 Transposase domain (DUF772) FCM34_02310 PF07662 Na+ dependent nucleoside transporter C-terminus FCM34_02310 PF07670 Nucleoside recognition FCM34_02310 PF01773 Na+ dependent nucleoside transporter N-terminus FCM34_02325 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FCM34_02330 PF01544 CorA-like Mg2+ transporter protein FCM34_02345 PF00999 Sodium/hydrogen exchanger family FCM34_02345 PF03471 Transporter associated domain FCM34_02345 PF02080 TrkA-C domain FCM34_02350 PF05068 Mannitol repressor FCM34_02355 PF08125 Mannitol dehydrogenase C-terminal domain FCM34_02355 PF01232 Mannitol dehydrogenase Rossmann domain FCM34_02360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FCM34_02360 PF02378 Phosphotransferase system, EIIC FCM34_02360 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FCM34_02365 PF08206 Ribonuclease B OB domain FCM34_02365 PF17876 Cold shock domain FCM34_02365 PF00773 RNB domain FCM34_02370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_02370 PF03466 LysR substrate binding domain FCM34_02375 PF00765 Autoinducer synthase FCM34_02380 PF03472 Autoinducer binding domain FCM34_02380 PF00196 Bacterial regulatory proteins, luxR family FCM34_02385 PF01810 LysE type translocator FCM34_02390 PF00149 Calcineurin-like phosphoesterase FCM34_02390 PF02872 5'-nucleotidase, C-terminal domain FCM34_02395 PF03279 Bacterial lipid A biosynthesis acyltransferase FCM34_02400 PF01467 Cytidylyltransferase-like FCM34_02400 PF00294 pfkB family carbohydrate kinase FCM34_02405 PF02321 Outer membrane efflux protein FCM34_02410 PF00293 NUDIX domain FCM34_02415 PF06853 Protein of unknown function (DUF1249) FCM34_02420 PF00149 Calcineurin-like phosphoesterase FCM34_02425 PF05728 Uncharacterised protein family (UPF0227) FCM34_02430 PF00293 NUDIX domain FCM34_02440 PF07869 Protein of unknown function (DUF1656) FCM34_02445 PF00529 HlyD membrane-fusion protein of T1SS FCM34_02445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FCM34_02450 PF04632 Fusaric acid resistance protein family FCM34_02455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_02455 PF00204 DNA gyrase B FCM34_02455 PF01751 Toprim domain FCM34_02455 PF00986 DNA gyrase B subunit, carboxyl terminus FCM34_02460 PF00521 DNA gyrase/topoisomerase IV, subunit A FCM34_02460 PF03989 DNA gyrase C-terminal domain, beta-propeller FCM34_02500 PF00684 DnaJ central domain FCM34_02500 PF01556 DnaJ C terminal domain FCM34_02500 PF00226 DnaJ domain FCM34_02510 PF00578 AhpC/TSA family FCM34_02530 PF01553 Acyltransferase FCM34_02535 PF04012 PspA/IM30 family FCM34_02550 PF01541 GIY-YIG catalytic domain FCM34_02555 PF00892 EamA-like transporter family FCM34_02560 PF03167 Uracil DNA glycosylase superfamily FCM34_02570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_02570 PF03466 LysR substrate binding domain FCM34_02575 PF00950 ABC 3 transport family FCM34_02580 PF00005 ABC transporter FCM34_02585 PF01297 Zinc-uptake complex component A periplasmic FCM34_02605 PF01551 Peptidase family M23 FCM34_02605 PF08525 Opacity-associated protein A N-terminal motif FCM34_02605 PF01476 LysM domain FCM34_02610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FCM34_02615 PF04222 Protein of unknown function (DUF416) FCM34_02645 PF00892 EamA-like transporter family FCM34_02650 PF01037 Lrp/AsnC ligand binding domain FCM34_02655 PF12464 Maltose acetyltransferase FCM34_02655 PF14602 Hexapeptide repeat of succinyl-transferase FCM34_02660 PF00128 Alpha amylase, catalytic domain FCM34_02660 PF11941 Domain of unknown function (DUF3459) FCM34_02665 PF00367 phosphotransferase system, EIIB FCM34_02665 PF02378 Phosphotransferase system, EIIC FCM34_02670 PF00356 Bacterial regulatory proteins, lacI family FCM34_02680 PF01238 Phosphomannose isomerase type I FCM34_02685 PF02378 Phosphotransferase system, EIIC FCM34_02690 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FCM34_02695 PF02378 Phosphotransferase system, EIIC FCM34_02700 PF00232 Glycosyl hydrolase family 1 FCM34_02705 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FCM34_02710 PF00480 ROK family FCM34_02715 PF02264 LamB porin FCM34_02730 PF13199 Glycosyl hydrolase family 66 FCM34_02730 PF03422 Carbohydrate binding module (family 6) FCM34_02730 PF16990 Carbohydrate binding module (family 35) FCM34_02735 PF02013 Cellulose or protein binding domain FCM34_02735 PF00150 Cellulase (glycosyl hydrolase family 5) FCM34_02740 PF00356 Bacterial regulatory proteins, lacI family FCM34_02750 PF00710 Asparaginase, N-terminal FCM34_02750 PF17763 Glutaminase/Asparaginase C-terminal domain FCM34_02765 PF02142 MGS-like domain FCM34_02770 PF00210 Ferritin-like domain FCM34_02785 PF08351 Domain of unknown function (DUF1726) FCM34_02785 PF13718 GNAT acetyltransferase 2 FCM34_02785 PF17176 tRNA-binding domain FCM34_02785 PF05127 Helicase FCM34_02790 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FCM34_02790 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FCM34_02795 PF00115 Cytochrome C and Quinol oxidase polypeptide I FCM34_02800 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FCM34_02805 PF00510 Cytochrome c oxidase subunit III FCM34_02830 PF01040 UbiA prenyltransferase family FCM34_02835 PF00171 Aldehyde dehydrogenase family FCM34_02840 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_02845 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_02850 PF00005 ABC transporter FCM34_02850 PF08402 TOBE domain FCM34_02855 PF13416 Bacterial extracellular solute-binding protein FCM34_02860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_02860 PF03466 LysR substrate binding domain FCM34_02865 PF03553 Na+/H+ antiporter family FCM34_02905 PF00534 Glycosyl transferases group 1 FCM34_02905 PF08323 Starch synthase catalytic domain FCM34_02910 PF00483 Nucleotidyl transferase FCM34_02915 PF05175 Methyltransferase small domain FCM34_02915 PF08468 Methyltransferase small domain N-terminal FCM34_02920 PF00701 Dihydrodipicolinate synthetase family FCM34_02925 PF00360 Phytochrome region FCM34_02925 PF01590 GAF domain FCM34_02925 PF00990 Diguanylate cyclase, GGDEF domain FCM34_02925 PF00563 EAL domain FCM34_02930 PF13419 Haloacid dehalogenase-like hydrolase FCM34_02935 PF17209 Hfq protein FCM34_02940 PF04403 Paraquat-inducible protein A FCM34_02945 PF02470 MlaD protein FCM34_02950 PF03886 ABC-type transport auxiliary lipoprotein component FCM34_02955 PF00691 OmpA family FCM34_02955 PF01389 OmpA-like transmembrane domain FCM34_02960 PF00657 GDSL-like Lipase/Acylhydrolase FCM34_02970 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FCM34_02970 PF01464 Transglycosylase SLT domain FCM34_02975 PF04362 Bacterial Fe(2+) trafficking FCM34_02980 PF00730 HhH-GPD superfamily base excision DNA repair protein FCM34_02980 PF14815 NUDIX domain FCM34_02980 PF10576 Iron-sulfur binding domain of endonuclease III FCM34_02980 PF00633 Helix-hairpin-helix motif FCM34_02985 PF16537 Type II secretion system protein B FCM34_02990 PF01471 Putative peptidoglycan binding domain FCM34_02990 PF13401 AAA domain FCM34_02995 PF12627 Probable RNA and SrmB- binding site of polymerase A FCM34_02995 PF01743 Poly A polymerase head domain FCM34_02995 PF01966 HD domain FCM34_03000 PF01384 Phosphate transporter family FCM34_03005 PF01865 Protein of unknown function DUF47 FCM34_03010 PF01928 CYTH domain FCM34_03015 PF05433 Glycine zipper 2TM domain FCM34_03020 PF00583 Acetyltransferase (GNAT) family FCM34_03025 PF00557 Metallopeptidase family M24 FCM34_03025 PF01321 Creatinase/Prolidase N-terminal domain FCM34_03030 PF00392 Bacterial regulatory proteins, gntR family FCM34_03035 PF01293 Phosphoenolpyruvate carboxykinase FCM34_03040 PF01430 Hsp33 protein FCM34_03045 PF01479 S4 domain FCM34_03050 PF11356 Type II secretion system protein C FCM34_03055 PF03958 Bacterial type II/III secretion system short domain FCM34_03055 PF00263 Bacterial type II and III secretion system protein FCM34_03060 PF00437 Type II/IV secretion system protein FCM34_03065 PF00482 Type II secretion system (T2SS), protein F FCM34_03070 PF08334 Type II secretion system (T2SS), protein G FCM34_03070 PF07963 Prokaryotic N-terminal methylation motif FCM34_03075 PF07963 Prokaryotic N-terminal methylation motif FCM34_03075 PF12019 Type II transport protein GspH FCM34_03080 PF02501 Type II secretion system (T2SS), protein I FCM34_03080 PF07963 Prokaryotic N-terminal methylation motif FCM34_03085 PF07963 Prokaryotic N-terminal methylation motif FCM34_03085 PF11612 Type II secretion system (T2SS), protein J FCM34_03105 PF03934 Type II secretion system (T2SS), protein K FCM34_03110 PF12693 GspL periplasmic domain FCM34_03110 PF05134 Type II secretion system (T2SS), protein L FCM34_03115 PF04612 Type II secretion system (T2SS), protein M FCM34_03120 PF01203 Type II secretion system (T2SS), protein N FCM34_03125 PF00196 Bacterial regulatory proteins, luxR family FCM34_03130 PF01479 S4 domain FCM34_03130 PF00579 tRNA synthetases class I (W and Y) FCM34_03135 PF03466 LysR substrate binding domain FCM34_03135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_03140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FCM34_03145 PF13419 Haloacid dehalogenase-like hydrolase FCM34_03150 PF00293 NUDIX domain FCM34_03155 PF00459 Inositol monophosphatase family FCM34_03160 PF03222 Tryptophan/tyrosine permease family FCM34_03165 PF01588 Putative tRNA binding domain FCM34_03175 PF01340 Met Apo-repressor, MetJ FCM34_03180 PF01053 Cys/Met metabolism PLP-dependent enzyme FCM34_03185 PF03447 Homoserine dehydrogenase, NAD binding domain FCM34_03185 PF00696 Amino acid kinase family FCM34_03185 PF00742 Homoserine dehydrogenase FCM34_03190 PF04172 LrgB-like family FCM34_03195 PF03788 LrgA family FCM34_03200 PF03466 LysR substrate binding domain FCM34_03200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_03215 PF00155 Aminotransferase class I and II FCM34_03215 PF00392 Bacterial regulatory proteins, gntR family FCM34_03235 PF04073 Aminoacyl-tRNA editing domain FCM34_03240 PF13426 PAS domain FCM34_03240 PF00990 Diguanylate cyclase, GGDEF domain FCM34_03240 PF08447 PAS fold FCM34_03240 PF08448 PAS fold FCM34_03240 PF00563 EAL domain FCM34_03240 PF05231 MASE1 FCM34_03245 PF00990 Diguanylate cyclase, GGDEF domain FCM34_03245 PF00563 EAL domain FCM34_03245 PF03707 Bacterial signalling protein N terminal repeat FCM34_03250 PF00311 Phosphoenolpyruvate carboxylase FCM34_03255 PF07687 Peptidase dimerisation domain FCM34_03255 PF01546 Peptidase family M20/M25/M40 FCM34_03260 PF01118 Semialdehyde dehydrogenase, NAD binding domain FCM34_03260 PF02774 Semialdehyde dehydrogenase, dimerisation domain FCM34_03265 PF00696 Amino acid kinase family FCM34_03270 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FCM34_03270 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FCM34_03275 PF00764 Arginosuccinate synthase FCM34_03280 PF14698 Argininosuccinate lyase C-terminal FCM34_03280 PF00206 Lyase FCM34_03285 PF03466 LysR substrate binding domain FCM34_03285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_03295 PF14552 Tautomerase enzyme FCM34_03325 PF12464 Maltose acetyltransferase FCM34_03325 PF14602 Hexapeptide repeat of succinyl-transferase FCM34_03330 PF13194 Domain of unknown function (DUF4010) FCM34_03335 PF00497 Bacterial extracellular solute-binding proteins, family 3 FCM34_03340 PF00005 ABC transporter FCM34_03345 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_03350 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_03355 PF00291 Pyridoxal-phosphate dependent enzyme FCM34_03360 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FCM34_03360 PF00326 Prolyl oligopeptidase family FCM34_03380 PF03710 Glutamate-ammonia ligase adenylyltransferase FCM34_03380 PF08335 GlnD PII-uridylyltransferase FCM34_03390 PF00672 HAMP domain FCM34_03390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_03390 PF02743 Cache domain FCM34_03395 PF00520 Ion transport protein FCM34_03395 PF00027 Cyclic nucleotide-binding domain FCM34_03400 PF08239 Bacterial SH3 domain FCM34_03410 PF09297 NADH pyrophosphatase zinc ribbon domain FCM34_03410 PF00293 NUDIX domain FCM34_03415 PF01208 Uroporphyrinogen decarboxylase (URO-D) FCM34_03420 PF00480 ROK family FCM34_03425 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FCM34_03425 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FCM34_03430 PF00162 Phosphoglycerate kinase FCM34_03435 PF01116 Fructose-bisphosphate aldolase class-II FCM34_03440 PF01266 FAD dependent oxidoreductase FCM34_03450 PF11412 Disulphide bond corrector protein DsbC FCM34_03450 PF02683 Cytochrome C biogenesis protein transmembrane region FCM34_03455 PF03091 CutA1 divalent ion tolerance protein FCM34_03470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_03470 PF03466 LysR substrate binding domain FCM34_03475 PF01571 Aminomethyltransferase folate-binding domain FCM34_03480 PF03937 Flavinator of succinate dehydrogenase FCM34_03490 PF02910 Fumarate reductase flavoprotein C-term FCM34_03490 PF00890 FAD binding domain FCM34_03495 PF08281 Sigma-70, region 4 FCM34_03495 PF04542 Sigma-70 region 2 FCM34_03500 PF03873 Anti sigma-E protein RseA, C-terminal domain FCM34_03500 PF03872 Anti sigma-E protein RseA, N-terminal domain FCM34_03505 PF03888 MucB/RseB N-terminal domain FCM34_03505 PF17188 MucB/RseB C-terminal domain FCM34_03515 PF06421 GTP-binding protein LepA C-terminus FCM34_03515 PF00009 Elongation factor Tu GTP binding domain FCM34_03515 PF00679 Elongation factor G C-terminus FCM34_03515 PF03144 Elongation factor Tu domain 2 FCM34_03520 PF10502 Signal peptidase, peptidase S26 FCM34_03525 PF14622 Ribonuclease-III-like FCM34_03525 PF00035 Double-stranded RNA binding motif FCM34_03530 PF01926 50S ribosome-binding GTPase FCM34_03530 PF07650 KH domain FCM34_03535 PF11967 Recombination protein O N terminal FCM34_03535 PF02565 Recombination protein O C terminal FCM34_03540 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FCM34_03545 PF01510 N-acetylmuramoyl-L-alanine amidase FCM34_03550 PF07308 Protein of unknown function (DUF1456) FCM34_03555 PF00072 Response regulator receiver domain FCM34_03555 PF01627 Hpt domain FCM34_03555 PF00512 His Kinase A (phospho-acceptor) domain FCM34_03555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_03555 PF00672 HAMP domain FCM34_03555 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FCM34_03560 PF05958 tRNA (Uracil-5-)-methyltransferase FCM34_03560 PF01938 TRAM domain FCM34_03565 PF02824 TGS domain FCM34_03565 PF04607 Region found in RelA / SpoT proteins FCM34_03565 PF13291 ACT domain FCM34_03570 PF03819 MazG nucleotide pyrophosphohydrolase domain FCM34_03575 PF06418 CTP synthase N-terminus FCM34_03575 PF00117 Glutamine amidotransferase class-I FCM34_03580 PF03952 Enolase, N-terminal domain FCM34_03580 PF00113 Enolase, C-terminal TIM barrel domain FCM34_03585 PF04977 Septum formation initiator FCM34_03590 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FCM34_03595 PF02542 YgbB family FCM34_03600 PF01142 tRNA pseudouridine synthase D (TruD) FCM34_03605 PF01975 Survival protein SurE FCM34_03615 PF09335 SNARE associated Golgi protein FCM34_03620 PF01551 Peptidase family M23 FCM34_03620 PF01476 LysM domain FCM34_03625 PF04539 Sigma-70 region 3 FCM34_03625 PF04542 Sigma-70 region 2 FCM34_03625 PF00140 Sigma-70 factor, region 1.2 FCM34_03625 PF04545 Sigma-70, region 4 FCM34_03630 PF00814 Glycoprotease family FCM34_03635 PF01165 Ribosomal protein S21 FCM34_03640 PF09424 Yqey-like protein FCM34_03645 PF08278 DNA primase DnaG DnaB-binding FCM34_03645 PF10410 DnaB-helicase binding domain of primase FCM34_03645 PF08275 DNA primase catalytic core, N-terminal domain FCM34_03645 PF01807 CHC2 zinc finger FCM34_03650 PF04546 Sigma-70, non-essential region FCM34_03650 PF00140 Sigma-70 factor, region 1.2 FCM34_03650 PF04542 Sigma-70 region 2 FCM34_03650 PF04545 Sigma-70, region 4 FCM34_03650 PF04539 Sigma-70 region 3 FCM34_03650 PF03979 Sigma-70 factor, region 1.1 FCM34_03665 PF00128 Alpha amylase, catalytic domain FCM34_03680 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FCM34_03680 PF02843 Phosphoribosylglycinamide synthetase, C domain FCM34_03680 PF02844 Phosphoribosylglycinamide synthetase, N domain FCM34_03685 PF01808 AICARFT/IMPCHase bienzyme FCM34_03685 PF02142 MGS-like domain FCM34_03690 PF13411 MerR HTH family regulatory protein FCM34_03700 PF03889 Alternative ribosome-rescue factor A FCM34_03705 PF04055 Radical SAM superfamily FCM34_03705 PF06969 HemN C-terminal domain FCM34_03710 PF01725 Ham1 family FCM34_03715 PF07690 Major Facilitator Superfamily FCM34_03720 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FCM34_03720 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FCM34_03730 PF01957 NfeD-like C-terminal, partner-binding FCM34_03735 PF16200 C-terminal region of band_7 FCM34_03735 PF01145 SPFH domain / Band 7 family FCM34_03740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FCM34_03740 PF14824 Sirohaem biosynthesis protein central FCM34_03740 PF10414 Sirohaem synthase dimerisation region FCM34_03745 PF01507 Phosphoadenosine phosphosulfate reductase family FCM34_03750 PF00009 Elongation factor Tu GTP binding domain FCM34_03755 PF02080 TrkA-C domain FCM34_03755 PF03600 Citrate transporter FCM34_03765 PF00313 'Cold-shock' DNA-binding domain FCM34_03780 PF00672 HAMP domain FCM34_03780 PF12729 Four helix bundle sensory module for signal transduction FCM34_03780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_03800 PF00005 ABC transporter FCM34_03815 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FCM34_03830 PF00719 Inorganic pyrophosphatase FCM34_03835 PF01225 Mur ligase family, catalytic domain FCM34_03835 PF08245 Mur ligase middle domain FCM34_03835 PF02875 Mur ligase family, glutamate ligase domain FCM34_03840 PF02441 Flavoprotein FCM34_03845 PF00440 Bacterial regulatory proteins, tetR family FCM34_03850 PF00156 Phosphoribosyl transferase domain FCM34_03855 PF00005 ABC transporter FCM34_03860 PF01061 ABC-2 type transporter FCM34_03870 PF02569 Pantoate-beta-alanine ligase FCM34_03875 PF02548 Ketopantoate hydroxymethyltransferase FCM34_03880 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FCM34_03885 PF12627 Probable RNA and SrmB- binding site of polymerase A FCM34_03885 PF12626 Polymerase A arginine-rich C-terminus FCM34_03885 PF01743 Poly A polymerase head domain FCM34_03890 PF00749 tRNA synthetases class I (E and Q), catalytic domain FCM34_03895 PF01258 Prokaryotic dksA/traR C4-type zinc finger FCM34_03900 PF17746 SfsA N-terminal OB domain FCM34_03900 PF03749 Sugar fermentation stimulation protein RE domain FCM34_03910 PF00271 Helicase conserved C-terminal domain FCM34_03910 PF00270 DEAD/DEAH box helicase FCM34_03910 PF04408 Helicase associated domain (HA2) FCM34_03910 PF08482 ATP-dependent helicase C-terminal FCM34_03915 PF14814 Bifunctional transglycosylase second domain FCM34_03915 PF00912 Transglycosylase FCM34_03915 PF00905 Penicillin binding protein transpeptidase domain FCM34_03920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FCM34_03925 PF00893 Small Multidrug Resistance protein FCM34_03930 PF00893 Small Multidrug Resistance protein FCM34_03935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_03935 PF03466 LysR substrate binding domain FCM34_03945 PF01569 PAP2 superfamily FCM34_03960 PF00202 Aminotransferase class-III FCM34_03965 PF00654 Voltage gated chloride channel FCM34_03975 PF01521 Iron-sulphur cluster biosynthesis FCM34_04000 PF01810 LysE type translocator FCM34_04005 PF02954 Bacterial regulatory protein, Fis family FCM34_04010 PF01207 Dihydrouridine synthase (Dus) FCM34_04020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FCM34_04050 PF00072 Response regulator receiver domain FCM34_04055 PF00854 POT family FCM34_04060 PF00483 Nucleotidyl transferase FCM34_04070 PF00459 Inositol monophosphatase family FCM34_04075 PF03795 YCII-related domain FCM34_04080 PF04279 Intracellular septation protein A FCM34_04085 PF00282 Pyridoxal-dependent decarboxylase conserved domain FCM34_04090 PF03006 Haemolysin-III related FCM34_04095 PF06826 Predicted Permease Membrane Region FCM34_04095 PF02080 TrkA-C domain FCM34_04105 PF07690 Major Facilitator Superfamily FCM34_04110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_04110 PF03466 LysR substrate binding domain FCM34_04115 PF07504 Fungalysin/Thermolysin Propeptide Motif FCM34_04115 PF04151 Bacterial pre-peptidase C-terminal domain FCM34_04115 PF03413 Peptidase propeptide and YPEB domain FCM34_04115 PF01447 Thermolysin metallopeptidase, catalytic domain FCM34_04115 PF02868 Thermolysin metallopeptidase, alpha-helical domain FCM34_04120 PF13302 Acetyltransferase (GNAT) domain FCM34_04125 PF13302 Acetyltransferase (GNAT) domain FCM34_04135 PF04074 YhcH/YjgK/YiaL FCM34_04140 PF00871 Acetokinase family FCM34_04145 PF00924 Mechanosensitive ion channel FCM34_04150 PF17969 L,D-transpeptidase C-terminal domain FCM34_04150 PF03734 L,D-transpeptidase catalytic domain FCM34_04155 PF00474 Sodium:solute symporter family FCM34_04165 PF13411 MerR HTH family regulatory protein FCM34_04195 PF02525 Flavodoxin-like fold FCM34_04200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_04200 PF03466 LysR substrate binding domain FCM34_04205 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FCM34_04215 PF00005 ABC transporter FCM34_04215 PF12848 ABC transporter FCM34_04220 PF00571 CBS domain FCM34_04220 PF00478 IMP dehydrogenase / GMP reductase domain FCM34_04240 PF00267 Gram-negative porin FCM34_04245 PF00072 Response regulator receiver domain FCM34_04245 PF01584 CheW-like domain FCM34_04250 PF13472 GDSL-like Lipase/Acylhydrolase family FCM34_04255 PF00005 ABC transporter FCM34_04265 PF01370 NAD dependent epimerase/dehydratase family FCM34_04265 PF08338 Domain of unknown function (DUF1731) FCM34_04270 PF00563 EAL domain FCM34_04270 PF12792 CSS motif domain associated with EAL FCM34_04275 PF00155 Aminotransferase class I and II FCM34_04280 PF04389 Peptidase family M28 FCM34_04280 PF01483 Proprotein convertase P-domain FCM34_04285 PF02390 Putative methyltransferase FCM34_04290 PF04320 Protein with unknown function (DUF469) FCM34_04295 PF04960 Glutaminase FCM34_04300 PF00581 Rhodanese-like domain FCM34_04305 PF06004 Bacterial protein of unknown function (DUF903) FCM34_04310 PF00005 ABC transporter FCM34_04310 PF00664 ABC transporter transmembrane region FCM34_04315 PF00561 alpha/beta hydrolase fold FCM34_04335 PF06877 Regulator of ribonuclease activity B FCM34_04340 PF00563 EAL domain FCM34_04340 PF00990 Diguanylate cyclase, GGDEF domain FCM34_04340 PF03707 Bacterial signalling protein N terminal repeat FCM34_04360 PF09905 DNA-binding protein VF530 FCM34_04365 PF02666 Phosphatidylserine decarboxylase FCM34_04370 PF03193 RsgA GTPase FCM34_04375 PF00929 Exonuclease FCM34_04415 PF00313 'Cold-shock' DNA-binding domain FCM34_04425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_04425 PF00672 HAMP domain FCM34_04430 PF00749 tRNA synthetases class I (E and Q), catalytic domain FCM34_04435 PF00749 tRNA synthetases class I (E and Q), catalytic domain FCM34_04440 PF00749 tRNA synthetases class I (E and Q), catalytic domain FCM34_04445 PF00749 tRNA synthetases class I (E and Q), catalytic domain FCM34_04480 PF00704 Glycosyl hydrolases family 18 FCM34_04480 PF06483 Chitinase C FCM34_04495 PF02472 Biopolymer transport protein ExbD/TolR FCM34_04500 PF01618 MotA/TolQ/ExbB proton channel family FCM34_04505 PF01618 MotA/TolQ/ExbB proton channel family FCM34_04515 PF07715 TonB-dependent Receptor Plug Domain FCM34_04515 PF00593 TonB dependent receptor FCM34_04525 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_04530 PF12911 N-terminal TM domain of oligopeptide transport permease C FCM34_04530 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_04535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FCM34_04540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FCM34_04540 PF00005 ABC transporter FCM34_04545 PF00005 ABC transporter FCM34_04545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FCM34_04555 PF07687 Peptidase dimerisation domain FCM34_04555 PF01546 Peptidase family M20/M25/M40 FCM34_04565 PF00156 Phosphoribosyl transferase domain FCM34_04575 PF07417 Sigma factor-binding transcriptional regulator Crl FCM34_04580 PF00696 Amino acid kinase family FCM34_04580 PF01472 PUA domain FCM34_04585 PF00171 Aldehyde dehydrogenase family FCM34_04595 PF00582 Universal stress protein family FCM34_04615 PF04324 BFD-like [2Fe-2S] binding domain FCM34_04615 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FCM34_04615 PF00384 Molybdopterin oxidoreductase FCM34_04615 PF01568 Molydopterin dinucleotide binding domain FCM34_04620 PF14824 Sirohaem biosynthesis protein central FCM34_04620 PF10414 Sirohaem synthase dimerisation region FCM34_04620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FCM34_04630 PF00005 ABC transporter FCM34_04635 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_04640 PF00005 ABC transporter FCM34_04645 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FCM34_04645 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FCM34_04645 PF04324 BFD-like [2Fe-2S] binding domain FCM34_04645 PF18267 Rubredoxin NAD+ reductase C-terminal domain FCM34_04645 PF07992 Pyridine nucleotide-disulphide oxidoreductase FCM34_04645 PF13806 Rieske-like [2Fe-2S] domain FCM34_04650 PF04324 BFD-like [2Fe-2S] binding domain FCM34_04650 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FCM34_04650 PF07992 Pyridine nucleotide-disulphide oxidoreductase FCM34_04650 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FCM34_04650 PF13806 Rieske-like [2Fe-2S] domain FCM34_04650 PF18267 Rubredoxin NAD+ reductase C-terminal domain FCM34_04655 PF00294 pfkB family carbohydrate kinase FCM34_04660 PF04227 Indigoidine synthase A like protein FCM34_04665 PF00194 Eukaryotic-type carbonic anhydrase FCM34_04680 PF00994 Probable molybdopterin binding domain FCM34_04690 PF06738 Putative threonine/serine exporter FCM34_04695 PF12821 Threonine/Serine exporter, ThrE FCM34_04700 PF00186 Dihydrofolate reductase FCM34_04705 PF00571 CBS domain FCM34_04705 PF00005 ABC transporter FCM34_04710 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_04715 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FCM34_04720 PF01507 Phosphoadenosine phosphosulfate reductase family FCM34_04725 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FCM34_04725 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FCM34_04730 PF00667 FAD binding domain FCM34_04730 PF00175 Oxidoreductase NAD-binding domain FCM34_04730 PF00258 Flavodoxin FCM34_04735 PF02567 Phenazine biosynthesis-like protein FCM34_04740 PF01336 OB-fold nucleic acid binding domain FCM34_04740 PF00152 tRNA synthetases class II (D, K and N) FCM34_04750 PF02743 Cache domain FCM34_04750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_04750 PF00672 HAMP domain FCM34_04755 PF03616 Sodium/glutamate symporter FCM34_04760 PF00710 Asparaginase, N-terminal FCM34_04760 PF17763 Glutaminase/Asparaginase C-terminal domain FCM34_04765 PF07023 Protein of unknown function (DUF1315) FCM34_04770 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FCM34_04770 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FCM34_04785 PF01343 Peptidase family S49 FCM34_04790 PF07992 Pyridine nucleotide-disulphide oxidoreductase FCM34_04790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FCM34_04795 PF00881 Nitroreductase family FCM34_04800 PF00672 HAMP domain FCM34_04800 PF02743 Cache domain FCM34_04800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_04805 PF12464 Maltose acetyltransferase FCM34_04805 PF00132 Bacterial transferase hexapeptide (six repeats) FCM34_04815 PF08240 Alcohol dehydrogenase GroES-like domain FCM34_04815 PF00107 Zinc-binding dehydrogenase FCM34_04820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_04820 PF03466 LysR substrate binding domain FCM34_04825 PF02378 Phosphotransferase system, EIIC FCM34_04825 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FCM34_04825 PF00367 phosphotransferase system, EIIB FCM34_04830 PF00474 Sodium:solute symporter family FCM34_04835 PF06196 Protein of unknown function (DUF997) FCM34_04840 PF02785 Biotin carboxylase C-terminal domain FCM34_04840 PF00289 Biotin carboxylase, N-terminal domain FCM34_04840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FCM34_04845 PF00364 Biotin-requiring enzyme FCM34_04850 PF01220 Dehydroquinase class II FCM34_04855 PF00501 AMP-binding enzyme FCM34_04855 PF16177 Acetyl-coenzyme A synthetase N-terminus FCM34_04855 PF13193 AMP-binding enzyme C-terminal domain FCM34_04860 PF00990 Diguanylate cyclase, GGDEF domain FCM34_04860 PF00563 EAL domain FCM34_04860 PF03707 Bacterial signalling protein N terminal repeat FCM34_04870 PF02613 Nitrate reductase delta subunit FCM34_04880 PF00464 Serine hydroxymethyltransferase FCM34_04890 PF03477 ATP cone domain FCM34_04895 PF01872 RibD C-terminal domain FCM34_04895 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FCM34_04900 PF00677 Lumazine binding domain FCM34_04905 PF00925 GTP cyclohydrolase II FCM34_04905 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FCM34_04910 PF00885 6,7-dimethyl-8-ribityllumazine synthase FCM34_04915 PF01029 NusB family FCM34_04920 PF00586 AIR synthase related protein, N-terminal domain FCM34_04920 PF02769 AIR synthase related protein, C-terminal domain FCM34_04925 PF04608 Phosphatidylglycerophosphatase A FCM34_04930 PF00005 ABC transporter FCM34_04930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FCM34_04935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FCM34_04950 PF02779 Transketolase, pyrimidine binding domain FCM34_04950 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FCM34_04950 PF02780 Transketolase, C-terminal domain FCM34_04955 PF00348 Polyprenyl synthetase FCM34_04960 PF02609 Exonuclease VII small subunit FCM34_04965 PF01618 MotA/TolQ/ExbB proton channel family FCM34_04970 PF00691 OmpA family FCM34_04970 PF13677 Membrane MotB of proton-channel complex MotA/MotB FCM34_04975 PF01272 Transcription elongation factor, GreA/GreB, C-term FCM34_04975 PF03449 Transcription elongation factor, N-terminal FCM34_04985 PF01985 CRS1 / YhbY (CRM) domain FCM34_04990 PF01728 FtsJ-like methyltransferase FCM34_04995 PF01434 Peptidase family M41 FCM34_04995 PF17862 AAA+ lid domain FCM34_04995 PF00004 ATPase family associated with various cellular activities (AAA) FCM34_04995 PF06480 FtsH Extracellular FCM34_05000 PF00809 Pterin binding enzyme FCM34_05005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FCM34_05005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FCM34_05005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FCM34_05005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FCM34_05010 PF00121 Triosephosphate isomerase FCM34_05015 PF03840 Preprotein translocase SecG subunit FCM34_05030 PF02576 RimP N-terminal domain FCM34_05030 PF17384 RimP C-terminal SH3 domain FCM34_05035 PF13184 NusA-like KH domain FCM34_05035 PF00575 S1 RNA binding domain FCM34_05035 PF08529 NusA N-terminal domain FCM34_05040 PF11987 Translation-initiation factor 2 FCM34_05040 PF04760 Translation initiation factor IF-2, N-terminal region FCM34_05040 PF08364 Bacterial translation initiation factor IF-2 associated region FCM34_05040 PF00009 Elongation factor Tu GTP binding domain FCM34_05045 PF02033 Ribosome-binding factor A FCM34_05050 PF09157 Pseudouridine synthase II TruB, C-terminal FCM34_05050 PF16198 tRNA pseudouridylate synthase B C-terminal domain FCM34_05050 PF01509 TruB family pseudouridylate synthase (N terminal domain) FCM34_05055 PF00312 Ribosomal protein S15 FCM34_05065 PF00575 S1 RNA binding domain FCM34_05065 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FCM34_05065 PF00013 KH domain FCM34_05065 PF01138 3' exoribonuclease family, domain 1 FCM34_05065 PF03725 3' exoribonuclease family, domain 2 FCM34_05070 PF07690 Major Facilitator Superfamily FCM34_05075 PF02635 DsrE/DsrF-like family FCM34_05080 PF06476 Protein of unknown function (DUF1090) FCM34_05095 PF12838 4Fe-4S dicluster domain FCM34_05110 PF00563 EAL domain FCM34_05110 PF00990 Diguanylate cyclase, GGDEF domain FCM34_05110 PF03707 Bacterial signalling protein N terminal repeat FCM34_05115 PF08446 PAS fold FCM34_05115 PF00360 Phytochrome region FCM34_05115 PF01590 GAF domain FCM34_05115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_05115 PF00512 His Kinase A (phospho-acceptor) domain FCM34_05135 PF00990 Diguanylate cyclase, GGDEF domain FCM34_05155 PF17969 L,D-transpeptidase C-terminal domain FCM34_05155 PF03734 L,D-transpeptidase catalytic domain FCM34_05165 PF01523 Putative modulator of DNA gyrase FCM34_05170 PF01523 Putative modulator of DNA gyrase FCM34_05175 PF00258 Flavodoxin FCM34_05180 PF00589 Phage integrase family FCM34_05180 PF02899 Phage integrase, N-terminal SAM-like domain FCM34_05185 PF01741 Large-conductance mechanosensitive channel, MscL FCM34_05195 PF02272 DHHA1 domain FCM34_05195 PF17768 RecJ OB domain FCM34_05195 PF01368 DHH family FCM34_05200 PF13411 MerR HTH family regulatory protein FCM34_05215 PF02508 Rnf-Nqr subunit, membrane protein FCM34_05225 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FCM34_05225 PF04055 Radical SAM superfamily FCM34_05230 PF03099 Biotin/lipoate A/B protein ligase family FCM34_05235 PF04359 Protein of unknown function (DUF493) FCM34_05240 PF07943 Penicillin-binding protein 5, C-terminal domain FCM34_05240 PF00768 D-alanyl-D-alanine carboxypeptidase FCM34_05245 PF03330 Lytic transglycolase FCM34_05245 PF05036 Sporulation related domain FCM34_05250 PF13406 Transglycosylase SLT domain FCM34_05255 PF01098 Cell cycle protein FCM34_05260 PF03717 Penicillin-binding Protein dimerisation domain FCM34_05260 PF00905 Penicillin binding protein transpeptidase domain FCM34_05265 PF02590 Predicted SPOUT methyltransferase FCM34_05275 PF01467 Cytidylyltransferase-like FCM34_05290 PF08264 Anticodon-binding domain of tRNA FCM34_05290 PF13603 Leucyl-tRNA synthetase, Domain 2 FCM34_05290 PF00133 tRNA synthetases class I (I, L, M and V) FCM34_05295 PF07295 Zinc-ribbon containing domain FCM34_05300 PF00795 Carbon-nitrogen hydrolase FCM34_05305 PF03471 Transporter associated domain FCM34_05305 PF00571 CBS domain FCM34_05310 PF02130 Uncharacterized protein family UPF0054 FCM34_05315 PF02562 PhoH-like protein FCM34_05320 PF00919 Uncharacterized protein family UPF0004 FCM34_05320 PF04055 Radical SAM superfamily FCM34_05320 PF01938 TRAM domain FCM34_05325 PF01494 FAD binding domain FCM34_05330 PF00857 Isochorismatase family FCM34_05335 PF00313 'Cold-shock' DNA-binding domain FCM34_05340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_05340 PF03466 LysR substrate binding domain FCM34_05350 PF13419 Haloacid dehalogenase-like hydrolase FCM34_05365 PF00990 Diguanylate cyclase, GGDEF domain FCM34_05365 PF17152 Periplasmic sensor domain FCM34_05375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FCM34_05375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FCM34_05385 PF03171 2OG-Fe(II) oxygenase superfamily FCM34_05385 PF14226 non-haem dioxygenase in morphine synthesis N-terminal FCM34_05390 PF03180 NLPA lipoprotein FCM34_05395 PF09383 NIL domain FCM34_05395 PF00005 ABC transporter FCM34_05400 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_05410 PF01132 Elongation factor P (EF-P) OB domain FCM34_05410 PF08207 Elongation factor P (EF-P) KOW-like domain FCM34_05410 PF09285 Elongation factor P, C-terminal FCM34_05420 PF00478 IMP dehydrogenase / GMP reductase domain FCM34_05425 PF08443 RimK-like ATP-grasp domain FCM34_05425 PF18030 RimK PreATP-grasp domain FCM34_05430 PF00512 His Kinase A (phospho-acceptor) domain FCM34_05430 PF08521 Two-component sensor kinase N-terminal FCM34_05430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_05435 PF00072 Response regulator receiver domain FCM34_05435 PF00486 Transcriptional regulatory protein, C terminal FCM34_05445 PF00106 short chain dehydrogenase FCM34_05455 PF00501 AMP-binding enzyme FCM34_05470 PF06224 Winged helix DNA-binding domain FCM34_05485 PF02313 Fumarate reductase subunit D FCM34_05490 PF02300 Fumarate reductase subunit C FCM34_05495 PF13085 2Fe-2S iron-sulfur cluster binding domain FCM34_05495 PF13183 4Fe-4S dicluster domain FCM34_05500 PF00890 FAD binding domain FCM34_05500 PF02910 Fumarate reductase flavoprotein C-term FCM34_05505 PF00672 HAMP domain FCM34_05505 PF02743 Cache domain FCM34_05505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_05510 PF03009 Glycerophosphoryl diester phosphodiesterase family FCM34_05515 PF12795 Mechanosensitive ion channel porin domain FCM34_05515 PF12794 Mechanosensitive ion channel inner membrane domain 1 FCM34_05515 PF00924 Mechanosensitive ion channel FCM34_05525 PF08525 Opacity-associated protein A N-terminal motif FCM34_05525 PF01551 Peptidase family M23 FCM34_05525 PF01476 LysM domain FCM34_05540 PF03466 LysR substrate binding domain FCM34_05540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_05555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_05555 PF03466 LysR substrate binding domain FCM34_05560 PF00912 Transglycosylase FCM34_05560 PF17092 Penicillin-binding protein OB-like domain FCM34_05560 PF00905 Penicillin binding protein transpeptidase domain FCM34_05585 PF03958 Bacterial type II/III secretion system short domain FCM34_05585 PF07660 Secretin and TonB N terminus short domain FCM34_05585 PF00263 Bacterial type II and III secretion system protein FCM34_05585 PF11741 AMIN domain FCM34_05590 PF01202 Shikimate kinase FCM34_05595 PF01761 3-dehydroquinate synthase FCM34_05600 PF05036 Sporulation related domain FCM34_05605 PF02086 D12 class N6 adenine-specific DNA methyltransferase FCM34_05610 PF00834 Ribulose-phosphate 3 epimerase family FCM34_05615 PF13419 Haloacid dehalogenase-like hydrolase FCM34_05620 PF00579 tRNA synthetases class I (W and Y) FCM34_05630 PF00117 Glutamine amidotransferase class-I FCM34_05635 PF00202 Aminotransferase class-III FCM34_05640 PF04958 Arginine N-succinyltransferase beta subunit FCM34_05645 PF00171 Aldehyde dehydrogenase family FCM34_05660 PF13419 Haloacid dehalogenase-like hydrolase FCM34_05665 PF07690 Major Facilitator Superfamily FCM34_05675 PF07859 alpha/beta hydrolase fold FCM34_05685 PF02080 TrkA-C domain FCM34_05685 PF03600 Citrate transporter FCM34_05730 PF01926 50S ribosome-binding GTPase FCM34_05730 PF06071 Protein of unknown function (DUF933) FCM34_05735 PF01195 Peptidyl-tRNA hydrolase FCM34_05740 PF14572 Phosphoribosyl synthetase-associated domain FCM34_05740 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FCM34_05750 PF00288 GHMP kinases N terminal domain FCM34_05750 PF08544 GHMP kinases C terminal FCM34_05755 PF03550 Outer membrane lipoprotein LolB FCM34_05760 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FCM34_05760 PF01488 Shikimate / quinate 5-dehydrogenase FCM34_05760 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FCM34_05765 PF00472 RF-1 domain FCM34_05765 PF03462 PCRF domain FCM34_05770 PF17827 PrmC N-terminal domain FCM34_05770 PF13847 Methyltransferase domain FCM34_05780 PF13369 Transglutaminase-like superfamily FCM34_05785 PF00793 DAHP synthetase I family FCM34_05790 PF00375 Sodium:dicarboxylate symporter family FCM34_05795 PF01228 Glycine radical FCM34_05800 PF03167 Uracil DNA glycosylase superfamily FCM34_05815 PF00923 Transaldolase/Fructose-6-phosphate aldolase FCM34_05820 PF01235 Sodium:alanine symporter family FCM34_05825 PF00144 Beta-lactamase FCM34_05830 PF07690 Major Facilitator Superfamily FCM34_05835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_05835 PF03466 LysR substrate binding domain FCM34_05840 PF03652 Holliday junction resolvase FCM34_05845 PF02622 Uncharacterized ACR, COG1678 FCM34_05850 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FCM34_05850 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FCM34_05855 PF04452 RNA methyltransferase FCM34_05860 PF04231 Endonuclease I FCM34_05865 PF17283 SprT-like zinc ribbon domain FCM34_05865 PF10263 SprT-like family FCM34_05870 PF02773 S-adenosylmethionine synthetase, C-terminal domain FCM34_05870 PF02772 S-adenosylmethionine synthetase, central domain FCM34_05870 PF00438 S-adenosylmethionine synthetase, N-terminal domain FCM34_05875 PF02780 Transketolase, C-terminal domain FCM34_05875 PF02779 Transketolase, pyrimidine binding domain FCM34_05875 PF00456 Transketolase, thiamine diphosphate binding domain FCM34_05885 PF01042 Endoribonuclease L-PSP FCM34_05900 PF03702 Anhydro-N-acetylmuramic acid kinase FCM34_05905 PF01551 Peptidase family M23 FCM34_05905 PF01476 LysM domain FCM34_05905 PF08525 Opacity-associated protein A N-terminal motif FCM34_05910 PF00579 tRNA synthetases class I (W and Y) FCM34_05915 PF01204 Trehalase FCM34_05925 PF01161 Phosphatidylethanolamine-binding protein FCM34_05935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_05935 PF03466 LysR substrate binding domain FCM34_05945 PF00155 Aminotransferase class I and II FCM34_05950 PF07690 Major Facilitator Superfamily FCM34_05955 PF03466 LysR substrate binding domain FCM34_05955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_05960 PF00106 short chain dehydrogenase FCM34_05965 PF01343 Peptidase family S49 FCM34_05965 PF08496 Peptidase family S49 N-terminal FCM34_05970 PF04996 Succinylarginine dihydrolase FCM34_05975 PF08272 Topoisomerase I zinc-ribbon-like FCM34_05975 PF01396 Topoisomerase DNA binding C4 zinc finger FCM34_05975 PF01131 DNA topoisomerase FCM34_05975 PF01751 Toprim domain FCM34_05985 PF08447 PAS fold FCM34_05985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_05990 PF00728 Glycosyl hydrolase family 20, catalytic domain FCM34_05990 PF02838 Glycosyl hydrolase family 20, domain 2 FCM34_05995 PF01869 BadF/BadG/BcrA/BcrD ATPase family FCM34_06005 PF00005 ABC transporter FCM34_06005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FCM34_06010 PF00005 ABC transporter FCM34_06010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FCM34_06015 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_06015 PF12911 N-terminal TM domain of oligopeptide transport permease C FCM34_06020 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_06025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FCM34_06030 PF00919 Uncharacterized protein family UPF0004 FCM34_06030 PF04055 Radical SAM superfamily FCM34_06030 PF18693 TRAM domain FCM34_06035 PF00072 Response regulator receiver domain FCM34_06040 PF01022 Bacterial regulatory protein, arsR family FCM34_06045 PF01758 Sodium Bile acid symporter family FCM34_06050 PF03960 ArsC family FCM34_06060 PF02049 Flagellar hook-basal body complex protein FliE FCM34_06065 PF01514 Secretory protein of YscJ/FliF family FCM34_06065 PF08345 Flagellar M-ring protein C-terminal FCM34_06070 PF14842 FliG N-terminal domain FCM34_06070 PF01706 FliG C-terminal domain FCM34_06070 PF14841 FliG middle domain FCM34_06080 PF18269 T3SS EscN ATPase C-terminal domain FCM34_06080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FCM34_06100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FCM34_06100 PF02154 Flagellar motor switch protein FliM FCM34_06105 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FCM34_06110 PF04347 Flagellar biosynthesis protein, FliO FCM34_06115 PF00813 FliP family FCM34_06120 PF01313 Bacterial export proteins, family 3 FCM34_06125 PF01311 Bacterial export proteins, family 1 FCM34_06130 PF01312 FlhB HrpN YscU SpaS Family FCM34_06135 PF00771 FHIPEP family FCM34_06140 PF00448 SRP54-type protein, GTPase domain FCM34_06145 PF10609 NUBPL iron-transfer P-loop NTPase FCM34_06150 PF04545 Sigma-70, region 4 FCM34_06150 PF04542 Sigma-70 region 2 FCM34_06150 PF04539 Sigma-70 region 3 FCM34_06155 PF00072 Response regulator receiver domain FCM34_06160 PF04344 Chemotaxis phosphatase, CheZ FCM34_06165 PF01584 CheW-like domain FCM34_06165 PF07194 P2 response regulator binding domain FCM34_06165 PF02895 Signal transducing histidine kinase, homodimeric domain FCM34_06165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_06165 PF01627 Hpt domain FCM34_06170 PF00072 Response regulator receiver domain FCM34_06170 PF01339 CheB methylesterase FCM34_06175 PF01618 MotA/TolQ/ExbB proton channel family FCM34_06180 PF00691 OmpA family FCM34_06180 PF13677 Membrane MotB of proton-channel complex MotA/MotB FCM34_06185 PF13614 AAA domain FCM34_06195 PF01584 CheW-like domain FCM34_06205 PF00005 ABC transporter FCM34_06210 PF03379 CcmB protein FCM34_06215 PF01578 Cytochrome C assembly protein FCM34_06220 PF04995 Heme exporter protein D (CcmD) FCM34_06225 PF03100 CcmE FCM34_06230 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FCM34_06230 PF01578 Cytochrome C assembly protein FCM34_06235 PF08534 Redoxin FCM34_06240 PF03918 Cytochrome C biogenesis protein FCM34_06250 PF04333 MlaA lipoprotein FCM34_06255 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FCM34_06255 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FCM34_06260 PF00462 Glutaredoxin FCM34_06265 PF01189 16S rRNA methyltransferase RsmB/F FCM34_06265 PF01029 NusB family FCM34_06280 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FCM34_06280 PF01243 Pyridoxamine 5'-phosphate oxidase FCM34_06285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_06285 PF03466 LysR substrate binding domain FCM34_06290 PF01546 Peptidase family M20/M25/M40 FCM34_06310 PF13508 Acetyltransferase (GNAT) domain FCM34_06345 PF00817 impB/mucB/samB family FCM34_06345 PF13438 Domain of unknown function (DUF4113) FCM34_06345 PF11799 impB/mucB/samB family C-terminal domain FCM34_06350 PF02321 Outer membrane efflux protein FCM34_06355 PF00873 AcrB/AcrD/AcrF family FCM34_06360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FCM34_06360 PF00529 HlyD membrane-fusion protein of T1SS FCM34_06400 PF00717 Peptidase S24-like FCM34_06430 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FCM34_06430 PF11867 Domain of unknown function (DUF3387) FCM34_06430 PF18766 SWI2/SNF2 ATPase FCM34_06510 PF09588 YqaJ-like viral recombinase domain FCM34_06515 PF01381 Helix-turn-helix FCM34_06520 PF05973 Phage derived protein Gp49-like (DUF891) FCM34_06540 PF13148 Protein of unknown function (DUF3987) FCM34_06550 PF00816 H-NS histone family FCM34_06555 PF13356 Arm DNA-binding domain FCM34_06555 PF00589 Phage integrase family FCM34_06560 PF02899 Phage integrase, N-terminal SAM-like domain FCM34_06560 PF00589 Phage integrase family FCM34_06610 PF04381 Putative exonuclease, RdgC FCM34_06645 PF06630 Enterobacterial exodeoxyribonuclease VIII FCM34_06645 PF12684 PDDEXK-like domain of unknown function (DUF3799) FCM34_06715 PF00772 DnaB-like helicase N terminal domain FCM34_06715 PF03796 DnaB-like helicase C terminal domain FCM34_06740 PF05772 NinB protein FCM34_06920 PF01668 SmpB protein FCM34_06925 PF03364 Polyketide cyclase / dehydrase and lipid transport FCM34_06935 PF13460 NAD(P)H-binding FCM34_06940 PF04355 SmpA / OmlA family FCM34_06945 PF00465 Iron-containing alcohol dehydrogenase FCM34_06950 PF01048 Phosphorylase superfamily FCM34_06955 PF00849 RNA pseudouridylate synthase FCM34_06960 PF01156 Inosine-uridine preferring nucleoside hydrolase FCM34_06975 PF07509 Protein of unknown function (DUF1523) FCM34_06980 PF00672 HAMP domain FCM34_06980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_06985 PF01810 LysE type translocator FCM34_06995 PF00999 Sodium/hydrogen exchanger family FCM34_06995 PF03471 Transporter associated domain FCM34_06995 PF02080 TrkA-C domain FCM34_07005 PF02557 D-alanyl-D-alanine carboxypeptidase FCM34_07010 PF07687 Peptidase dimerisation domain FCM34_07010 PF01546 Peptidase family M20/M25/M40 FCM34_07015 PF03960 ArsC family FCM34_07025 PF03606 C4-dicarboxylate anaerobic carrier FCM34_07030 PF01546 Peptidase family M20/M25/M40 FCM34_07030 PF07687 Peptidase dimerisation domain FCM34_07045 PF03605 Anaerobic c4-dicarboxylate membrane transporter FCM34_07050 PF00152 tRNA synthetases class II (D, K and N) FCM34_07050 PF01336 OB-fold nucleic acid binding domain FCM34_07070 PF04055 Radical SAM superfamily FCM34_07070 PF06968 Biotin and Thiamin Synthesis associated domain FCM34_07075 PF00155 Aminotransferase class I and II FCM34_07080 PF12697 Alpha/beta hydrolase family FCM34_07080 PF08241 Methyltransferase domain FCM34_07090 PF01435 Peptidase family M48 FCM34_07095 PF00111 2Fe-2S iron-sulfur cluster binding domain FCM34_07095 PF03473 MOSC domain FCM34_07095 PF03476 MOSC N-terminal beta barrel domain FCM34_07095 PF00111 2Fe-2S iron-sulfur cluster binding domain FCM34_07095 PF03473 MOSC domain FCM34_07095 PF03476 MOSC N-terminal beta barrel domain FCM34_07100 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FCM34_07100 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FCM34_07100 PF07992 Pyridine nucleotide-disulphide oxidoreductase FCM34_07105 PF10371 Domain of unknown function FCM34_07105 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FCM34_07105 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FCM34_07105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FCM34_07105 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FCM34_07110 PF04325 Protein of unknown function (DUF465) FCM34_07120 PF01554 MatE FCM34_07140 PF00291 Pyridoxal-phosphate dependent enzyme FCM34_07145 PF00465 Iron-containing alcohol dehydrogenase FCM34_07155 PF08359 YsiA-like protein, C-terminal region FCM34_07155 PF00440 Bacterial regulatory proteins, tetR family FCM34_07160 PF00171 Aldehyde dehydrogenase family FCM34_07170 PF00877 NlpC/P60 family FCM34_07175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_07175 PF03466 LysR substrate binding domain FCM34_07195 PF08003 Protein of unknown function (DUF1698) FCM34_07200 PF13649 Methyltransferase domain FCM34_07205 PF01904 Protein of unknown function DUF72 FCM34_07215 PF02938 GAD domain FCM34_07215 PF01336 OB-fold nucleic acid binding domain FCM34_07215 PF00152 tRNA synthetases class II (D, K and N) FCM34_07220 PF01709 Transcriptional regulator FCM34_07225 PF08019 Phosphoethanolamine transferase EptA/EptB FCM34_07225 PF00884 Sulfatase FCM34_07230 PF00480 ROK family FCM34_07230 PF01047 MarR family FCM34_07235 PF01979 Amidohydrolase family FCM34_07240 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FCM34_07245 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FCM34_07245 PF00367 phosphotransferase system, EIIB FCM34_07245 PF02378 Phosphotransferase system, EIIC FCM34_07250 PF03173 Putative carbohydrate binding domain FCM34_07250 PF00728 Glycosyl hydrolase family 20, catalytic domain FCM34_07250 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain FCM34_07250 PF02838 Glycosyl hydrolase family 20, domain 2 FCM34_07255 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FCM34_07255 PF00749 tRNA synthetases class I (E and Q), catalytic domain FCM34_07260 PF01475 Ferric uptake regulator family FCM34_07270 PF00258 Flavodoxin FCM34_07275 PF01402 Ribbon-helix-helix protein, copG family FCM34_07285 PF12697 Alpha/beta hydrolase family FCM34_07290 PF03925 SeqA protein C-terminal domain FCM34_07290 PF17206 SeqA protein N-terminal domain FCM34_07295 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FCM34_07295 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FCM34_07295 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FCM34_07295 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FCM34_07305 PF01047 MarR family FCM34_07310 PF13406 Transglycosylase SLT domain FCM34_07315 PF01066 CDP-alcohol phosphatidyltransferase FCM34_07320 PF00005 ABC transporter FCM34_07330 PF13416 Bacterial extracellular solute-binding protein FCM34_07335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FCM34_07335 PF07992 Pyridine nucleotide-disulphide oxidoreductase FCM34_07335 PF00403 Heavy-metal-associated domain FCM34_07340 PF02627 Carboxymuconolactone decarboxylase family FCM34_07350 PF05598 Transposase domain (DUF772) FCM34_07350 PF01609 Transposase DDE domain FCM34_07355 PF13408 Recombinase zinc beta ribbon domain FCM34_07355 PF00239 Resolvase, N terminal domain FCM34_07355 PF07508 Recombinase FCM34_07370 PF01103 Surface antigen FCM34_07370 PF17243 POTRA domain TamA domain 1 FCM34_07370 PF07244 Surface antigen variable number repeat FCM34_07375 PF04357 TamB, inner membrane protein subunit of TAM complex FCM34_07395 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FCM34_07400 PF00990 Diguanylate cyclase, GGDEF domain FCM34_07400 PF00563 EAL domain FCM34_07400 PF03707 Bacterial signalling protein N terminal repeat FCM34_07405 PF01464 Transglycosylase SLT domain FCM34_07405 PF14718 Soluble lytic murein transglycosylase L domain FCM34_07410 PF00356 Bacterial regulatory proteins, lacI family FCM34_07420 PF03061 Thioesterase superfamily FCM34_07430 PF03372 Endonuclease/Exonuclease/phosphatase family FCM34_07435 PF01464 Transglycosylase SLT domain FCM34_07435 PF01476 LysM domain FCM34_07440 PF00753 Metallo-beta-lactamase superfamily FCM34_07440 PF16123 Hydroxyacylglutathione hydrolase C-terminus FCM34_07445 PF08241 Methyltransferase domain FCM34_07450 PF00075 RNase H FCM34_07455 PF00929 Exonuclease FCM34_07465 PF11849 Domain of unknown function (DUF3369) FCM34_07470 PF09317 Domain of unknown function (DUF1974) FCM34_07470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FCM34_07470 PF02770 Acyl-CoA dehydrogenase, middle domain FCM34_07470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FCM34_07475 PF13580 SIS domain FCM34_07480 PF13230 Glutamine amidotransferases class-II FCM34_07490 PF01933 Uncharacterised protein family UPF0052 FCM34_07500 PF00512 His Kinase A (phospho-acceptor) domain FCM34_07500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_07500 PF00072 Response regulator receiver domain FCM34_07500 PF09456 RcsC Alpha-Beta-Loop (ABL) FCM34_07515 PF00196 Bacterial regulatory proteins, luxR family FCM34_07515 PF00072 Response regulator receiver domain FCM34_07520 PF07730 Histidine kinase FCM34_07520 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FCM34_07520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_07520 PF00672 HAMP domain FCM34_07525 PF06463 Molybdenum Cofactor Synthesis C FCM34_07525 PF04055 Radical SAM superfamily FCM34_07530 PF12800 4Fe-4S binding domain FCM34_07530 PF00037 4Fe-4S binding domain FCM34_07530 PF13187 4Fe-4S dicluster domain FCM34_07540 PF10518 TAT (twin-arginine translocation) pathway signal sequence FCM34_07540 PF01568 Molydopterin dinucleotide binding domain FCM34_07540 PF00384 Molybdopterin oxidoreductase FCM34_07540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FCM34_07545 PF12800 4Fe-4S binding domain FCM34_07545 PF12838 4Fe-4S dicluster domain FCM34_07550 PF12801 4Fe-4S binding domain FCM34_07550 PF13237 4Fe-4S dicluster domain FCM34_07555 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FCM34_07560 PF03264 NapC/NirT cytochrome c family, N-terminal region FCM34_07565 PF00994 Probable molybdopterin binding domain FCM34_07570 PF01967 MoaC family FCM34_07575 PF02597 ThiS family FCM34_07580 PF02391 MoaE protein FCM34_07590 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_07595 PF00005 ABC transporter FCM34_07595 PF03459 TOBE domain FCM34_07600 PF12697 Alpha/beta hydrolase family FCM34_07605 PF00899 ThiF family FCM34_07610 PF00994 Probable molybdopterin binding domain FCM34_07610 PF03454 MoeA C-terminal region (domain IV) FCM34_07610 PF03453 MoeA N-terminal region (domain I and II) FCM34_07615 PF01227 GTP cyclohydrolase I FCM34_07620 PF17200 Single Cache domain 2 FCM34_07620 PF00672 HAMP domain FCM34_07620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_07625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_07625 PF00672 HAMP domain FCM34_07630 PF01268 Formate--tetrahydrofolate ligase FCM34_07640 PF03466 LysR substrate binding domain FCM34_07640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_07645 PF04264 YceI-like domain FCM34_07670 PF07687 Peptidase dimerisation domain FCM34_07670 PF01546 Peptidase family M20/M25/M40 FCM34_07685 PF17944 Arginine decarboxylase C-terminal helical extension FCM34_07685 PF17810 Arginine decarboxylase helical bundle domain FCM34_07685 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FCM34_07700 PF03707 Bacterial signalling protein N terminal repeat FCM34_07700 PF00990 Diguanylate cyclase, GGDEF domain FCM34_07700 PF00563 EAL domain FCM34_07705 PF00300 Histidine phosphatase superfamily (branch 1) FCM34_07720 PF00665 Integrase core domain FCM34_07745 PF07282 Putative transposase DNA-binding domain FCM34_07745 PF01385 Probable transposase FCM34_07745 PF12323 Helix-turn-helix domain FCM34_07755 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FCM34_07755 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FCM34_07760 PF01479 S4 domain FCM34_07760 PF00849 RNA pseudouridylate synthase FCM34_07765 PF07690 Major Facilitator Superfamily FCM34_07775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_07775 PF03466 LysR substrate binding domain FCM34_07785 PF10689 Protein of unknown function (DUF2496) FCM34_07790 PF03061 Thioesterase superfamily FCM34_07795 PF04391 Protein of unknown function (DUF533) FCM34_07805 PF00155 Aminotransferase class I and II FCM34_07805 PF00392 Bacterial regulatory proteins, gntR family FCM34_07810 PF01654 Cytochrome bd terminal oxidase subunit I FCM34_07815 PF02322 Cytochrome bd terminal oxidase subunit II FCM34_07825 PF07690 Major Facilitator Superfamily FCM34_07830 PF00248 Aldo/keto reductase family FCM34_07850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_07850 PF03466 LysR substrate binding domain FCM34_07855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FCM34_07855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FCM34_07860 PF00230 Major intrinsic protein FCM34_07865 PF07690 Major Facilitator Superfamily FCM34_07870 PF00455 DeoR C terminal sensor domain FCM34_07870 PF08220 DeoR-like helix-turn-helix domain FCM34_07875 PF01266 FAD dependent oxidoreductase FCM34_07875 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FCM34_07880 PF03009 Glycerophosphoryl diester phosphodiesterase family FCM34_07885 PF00793 DAHP synthetase I family FCM34_07890 PF01817 Chorismate mutase type II FCM34_07890 PF02153 Prephenate dehydrogenase FCM34_07895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_07895 PF03466 LysR substrate binding domain FCM34_07900 PF04219 Protein of unknown function, DUF FCM34_07905 PF03974 Ecotin FCM34_07925 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FCM34_07925 PF00326 Prolyl oligopeptidase family FCM34_07930 PF00593 TonB dependent receptor FCM34_07930 PF07715 TonB-dependent Receptor Plug Domain FCM34_07935 PF00884 Sulfatase FCM34_07935 PF11893 Domain of unknown function (DUF3413) FCM34_07940 PF07208 Protein of unknown function (DUF1414) FCM34_07945 PF04245 37-kD nucleoid-associated bacterial protein FCM34_07950 PF01547 Bacterial extracellular solute-binding protein FCM34_07955 PF14785 Maltose transport system permease protein MalF P2 domain FCM34_07955 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_07960 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_07965 PF00005 ABC transporter FCM34_07965 PF08402 TOBE domain FCM34_07970 PF03976 Polyphosphate kinase 2 (PPK2) FCM34_07975 PF00561 alpha/beta hydrolase fold FCM34_07985 PF01594 AI-2E family transporter FCM34_07990 PF01206 Sulfurtransferase TusA FCM34_07995 PF13181 Tetratricopeptide repeat FCM34_07995 PF01435 Peptidase family M48 FCM34_08000 PF00578 AhpC/TSA family FCM34_08005 PF03960 ArsC family FCM34_08020 PF04336 Acyl carrier protein phosphodiesterase FCM34_08030 PF00497 Bacterial extracellular solute-binding proteins, family 3 FCM34_08035 PF01979 Amidohydrolase family FCM34_08040 PF03956 Lysine exporter LysO FCM34_08045 PF00005 ABC transporter FCM34_08050 PF00497 Bacterial extracellular solute-binding proteins, family 3 FCM34_08055 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_08060 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_08070 PF04055 Radical SAM superfamily FCM34_08075 PF00563 EAL domain FCM34_08075 PF03707 Bacterial signalling protein N terminal repeat FCM34_08075 PF00990 Diguanylate cyclase, GGDEF domain FCM34_08080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FCM34_08080 PF07992 Pyridine nucleotide-disulphide oxidoreductase FCM34_08085 PF07678 A-macroglobulin TED domain FCM34_08085 PF01835 MG2 domain FCM34_08085 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FCM34_08085 PF17962 Bacterial macroglobulin domain 6 FCM34_08085 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FCM34_08085 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FCM34_08085 PF07703 Alpha-2-macroglobulin bait region domain FCM34_08085 PF00207 Alpha-2-macroglobulin family FCM34_08085 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FCM34_08090 PF06832 Penicillin-Binding Protein C-terminus Family FCM34_08090 PF00912 Transglycosylase FCM34_08090 PF00905 Penicillin binding protein transpeptidase domain FCM34_08100 PF02568 Thiamine biosynthesis protein (ThiI) FCM34_08100 PF02926 THUMP domain FCM34_08110 PF03458 UPF0126 domain FCM34_08115 PF00669 Bacterial flagellin N-terminal helical region FCM34_08115 PF00700 Bacterial flagellin C-terminal helical region FCM34_08120 PF03646 FlaG protein FCM34_08125 PF02465 Flagellar hook-associated protein 2 N-terminus FCM34_08125 PF07195 Flagellar hook-associated protein 2 C-terminus FCM34_08125 PF07196 Flagellin hook IN motif FCM34_08130 PF02561 Flagellar protein FliS FCM34_08145 PF01609 Transposase DDE domain FCM34_08145 PF05598 Transposase domain (DUF772) FCM34_08155 PF01497 Periplasmic binding protein FCM34_08165 PF01048 Phosphorylase superfamily FCM34_08180 PF02535 ZIP Zinc transporter FCM34_08185 PF00672 HAMP domain FCM34_08185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_08185 PF12729 Four helix bundle sensory module for signal transduction FCM34_08190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FCM34_08195 PF10576 Iron-sulfur binding domain of endonuclease III FCM34_08195 PF00633 Helix-hairpin-helix motif FCM34_08195 PF00730 HhH-GPD superfamily base excision DNA repair protein FCM34_08200 PF02508 Rnf-Nqr subunit, membrane protein FCM34_08205 PF04205 FMN-binding domain FCM34_08210 PF03116 NQR2, RnfD, RnfE family FCM34_08215 PF12838 4Fe-4S dicluster domain FCM34_08215 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FCM34_08215 PF10531 SLBB domain FCM34_08215 PF13375 RnfC Barrel sandwich hybrid domain FCM34_08220 PF04060 Putative Fe-S cluster FCM34_08225 PF02508 Rnf-Nqr subunit, membrane protein FCM34_08230 PF01385 Probable transposase FCM34_08230 PF07282 Putative transposase DNA-binding domain FCM34_08230 PF12323 Helix-turn-helix domain FCM34_08240 PF00892 EamA-like transporter family FCM34_08250 PF13426 PAS domain FCM34_08250 PF08447 PAS fold FCM34_08250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_08265 PF07055 Enoyl reductase FAD binding domain FCM34_08265 PF12241 Trans-2-enoyl-CoA reductase catalytic region FCM34_08265 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FCM34_08270 PF03606 C4-dicarboxylate anaerobic carrier FCM34_08275 PF00155 Aminotransferase class I and II FCM34_08285 PF00462 Glutaredoxin FCM34_08290 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FCM34_08295 PF04851 Type III restriction enzyme, res subunit FCM34_08295 PF00271 Helicase conserved C-terminal domain FCM34_08300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FCM34_08300 PF00529 HlyD membrane-fusion protein of T1SS FCM34_08320 PF00924 Mechanosensitive ion channel FCM34_08320 PF12794 Mechanosensitive ion channel inner membrane domain 1 FCM34_08320 PF12795 Mechanosensitive ion channel porin domain FCM34_08325 PF02554 Carbon starvation protein CstA FCM34_08330 PF00072 Response regulator receiver domain FCM34_08330 PF04397 LytTr DNA-binding domain FCM34_08335 PF07694 5TMR of 5TMR-LYT FCM34_08335 PF06580 Histidine kinase FCM34_08340 PF00072 Response regulator receiver domain FCM34_08345 PF00465 Iron-containing alcohol dehydrogenase FCM34_08345 PF00171 Aldehyde dehydrogenase family FCM34_08350 PF01914 MarC family integral membrane protein FCM34_08355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FCM34_08360 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_08365 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_08365 PF12911 N-terminal TM domain of oligopeptide transport permease C FCM34_08370 PF00005 ABC transporter FCM34_08370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FCM34_08375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FCM34_08375 PF00005 ABC transporter FCM34_08380 PF03741 Integral membrane protein TerC family FCM34_08385 PF00842 Alanine racemase, C-terminal domain FCM34_08385 PF01168 Alanine racemase, N-terminal domain FCM34_08395 PF00375 Sodium:dicarboxylate symporter family FCM34_08415 PF01979 Amidohydrolase family FCM34_08425 PF00672 HAMP domain FCM34_08425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_08430 PF01230 HIT domain FCM34_08465 PF13721 SecD export protein N-terminal TM region FCM34_08465 PF02355 Protein export membrane protein FCM34_08465 PF07549 SecD/SecF GG Motif FCM34_08470 PF02355 Protein export membrane protein FCM34_08470 PF07549 SecD/SecF GG Motif FCM34_08475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_08475 PF08447 PAS fold FCM34_08475 PF13426 PAS domain FCM34_08485 PF05661 Protein of unknown function (DUF808) FCM34_08490 PF08439 Oligopeptidase F FCM34_08490 PF01432 Peptidase family M3 FCM34_08495 PF08439 Oligopeptidase F FCM34_08495 PF01432 Peptidase family M3 FCM34_08500 PF05728 Uncharacterised protein family (UPF0227) FCM34_08505 PF07992 Pyridine nucleotide-disulphide oxidoreductase FCM34_08510 PF01906 Putative heavy-metal-binding FCM34_08515 PF00884 Sulfatase FCM34_08525 PF00696 Amino acid kinase family FCM34_08525 PF01842 ACT domain FCM34_08530 PF00696 Amino acid kinase family FCM34_08530 PF00583 Acetyltransferase (GNAT) family FCM34_08535 PF01625 Peptide methionine sulfoxide reductase FCM34_08560 PF03466 LysR substrate binding domain FCM34_08560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_08565 PF02652 L-lactate permease FCM34_08570 PF02754 Cysteine-rich domain FCM34_08575 PF02589 LUD domain FCM34_08575 PF13183 4Fe-4S dicluster domain FCM34_08575 PF11870 Domain of unknown function (DUF3390) FCM34_08580 PF02589 LUD domain FCM34_08585 PF01565 FAD binding domain FCM34_08585 PF02913 FAD linked oxidases, C-terminal domain FCM34_08595 PF01609 Transposase DDE domain FCM34_08595 PF05598 Transposase domain (DUF772) FCM34_08615 PF00005 ABC transporter FCM34_08625 PF03600 Citrate transporter FCM34_08635 PF07690 Major Facilitator Superfamily FCM34_08655 PF01593 Flavin containing amine oxidoreductase FCM34_08660 PF03239 Iron permease FTR1 family FCM34_08690 PF04168 A predicted alpha-helical domain with a conserved ER motif. FCM34_08690 PF14403 Circularly permuted ATP-grasp type 2 FCM34_08695 PF14403 Circularly permuted ATP-grasp type 2 FCM34_08700 PF00106 short chain dehydrogenase FCM34_08725 PF00916 Sulfate permease family FCM34_08725 PF01740 STAS domain FCM34_08780 PF13662 Toprim domain FCM34_08780 PF02132 RecR protein FCM34_08785 PF00183 Hsp90 protein FCM34_08785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_08790 PF05191 Adenylate kinase, active site lid FCM34_08795 PF00762 Ferrochelatase FCM34_08800 PF01124 MAPEG family FCM34_08805 PF00294 pfkB family carbohydrate kinase FCM34_08810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_08810 PF17200 Single Cache domain 2 FCM34_08810 PF00672 HAMP domain FCM34_08825 PF00990 Diguanylate cyclase, GGDEF domain FCM34_08825 PF03707 Bacterial signalling protein N terminal repeat FCM34_08825 PF00563 EAL domain FCM34_08830 PF00483 Nucleotidyl transferase FCM34_08840 PF07273 Protein of unknown function (DUF1439) FCM34_08845 PF00425 chorismate binding enzyme FCM34_08850 PF00501 AMP-binding enzyme FCM34_08850 PF13193 AMP-binding enzyme C-terminal domain FCM34_08855 PF00857 Isochorismatase family FCM34_08855 PF00550 Phosphopantetheine attachment site FCM34_08860 PF13193 AMP-binding enzyme C-terminal domain FCM34_08860 PF00501 AMP-binding enzyme FCM34_08860 PF00975 Thioesterase domain FCM34_08860 PF00550 Phosphopantetheine attachment site FCM34_08860 PF00668 Condensation domain FCM34_08895 PF00668 Condensation domain FCM34_08895 PF13193 AMP-binding enzyme C-terminal domain FCM34_08895 PF00550 Phosphopantetheine attachment site FCM34_08895 PF00501 AMP-binding enzyme FCM34_08895 PF00975 Thioesterase domain FCM34_08900 PF01497 Periplasmic binding protein FCM34_08905 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FCM34_08905 PF01648 4'-phosphopantetheinyl transferase superfamily FCM34_08910 PF00005 ABC transporter FCM34_08915 PF01032 FecCD transport family FCM34_08920 PF01032 FecCD transport family FCM34_08925 PF07715 TonB-dependent Receptor Plug Domain FCM34_08925 PF00593 TonB dependent receptor FCM34_08940 PF11143 Protein of unknown function (DUF2919) FCM34_08945 PF01544 CorA-like Mg2+ transporter protein FCM34_08955 PF01012 Electron transfer flavoprotein domain FCM34_08960 PF00766 Electron transfer flavoprotein FAD-binding domain FCM34_08960 PF01012 Electron transfer flavoprotein domain FCM34_08965 PF00266 Aminotransferase class-V FCM34_08970 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FCM34_08975 PF00793 DAHP synthetase I family FCM34_08980 PF03741 Integral membrane protein TerC family FCM34_08990 PF08891 YfcL protein FCM34_08995 PF00501 AMP-binding enzyme FCM34_09000 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region FCM34_09000 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FCM34_09005 PF04172 LrgB-like family FCM34_09010 PF03788 LrgA family FCM34_09025 PF00929 Exonuclease FCM34_09025 PF08411 Exonuclease C-terminal FCM34_09040 PF10509 Galactokinase galactose-binding signature FCM34_09040 PF08544 GHMP kinases C terminal FCM34_09040 PF00288 GHMP kinases N terminal domain FCM34_09045 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FCM34_09045 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FCM34_09050 PF16363 GDP-mannose 4,6 dehydratase FCM34_09055 PF00356 Bacterial regulatory proteins, lacI family FCM34_09060 PF02264 LamB porin FCM34_09065 PF07745 Glycosyl hydrolase family 53 FCM34_09075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_09075 PF02743 Cache domain FCM34_09075 PF00672 HAMP domain FCM34_09080 PF00005 ABC transporter FCM34_09080 PF17912 MalK OB fold domain FCM34_09085 PF13416 Bacterial extracellular solute-binding protein FCM34_09090 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_09095 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_09100 PF07745 Glycosyl hydrolase family 53 FCM34_09105 PF02449 Beta-galactosidase FCM34_09105 PF08532 Beta-galactosidase trimerisation domain FCM34_09105 PF08533 Beta-galactosidase C-terminal domain FCM34_09110 PF02378 Phosphotransferase system, EIIC FCM34_09110 PF00367 phosphotransferase system, EIIB FCM34_09115 PF07745 Glycosyl hydrolase family 53 FCM34_09120 PF02887 Pyruvate kinase, alpha/beta domain FCM34_09120 PF00224 Pyruvate kinase, barrel domain FCM34_09140 PF00149 Calcineurin-like phosphoesterase FCM34_09145 PF03706 Lysylphosphatidylglycerol synthase TM region FCM34_09145 PF09924 Uncharacterised conserved protein (DUF2156) FCM34_09155 PF00497 Bacterial extracellular solute-binding proteins, family 3 FCM34_09160 PF00795 Carbon-nitrogen hydrolase FCM34_09165 PF00155 Aminotransferase class I and II FCM34_09170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_09170 PF03466 LysR substrate binding domain FCM34_09175 PF02610 L-arabinose isomerase FCM34_09175 PF11762 L-arabinose isomerase C-terminal domain FCM34_09180 PF00596 Class II Aldolase and Adducin N-terminal domain FCM34_09185 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FCM34_09190 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FCM34_09195 PF00005 ABC transporter FCM34_09200 PF02653 Branched-chain amino acid transport system / permease component FCM34_09205 PF12833 Helix-turn-helix domain FCM34_09205 PF02311 AraC-like ligand binding domain FCM34_09210 PF00444 Ribosomal protein L36 FCM34_09215 PF01197 Ribosomal protein L31 FCM34_09230 PF01863 Protein of unknown function DUF45 FCM34_09245 PF03606 C4-dicarboxylate anaerobic carrier FCM34_09255 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FCM34_09255 PF01266 FAD dependent oxidoreductase FCM34_09260 PF00109 Beta-ketoacyl synthase, N-terminal domain FCM34_09260 PF02801 Beta-ketoacyl synthase, C-terminal domain FCM34_09275 PF00285 Citrate synthase, C-terminal domain FCM34_09280 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FCM34_09285 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FCM34_09290 PF00890 FAD binding domain FCM34_09290 PF02910 Fumarate reductase flavoprotein C-term FCM34_09295 PF13085 2Fe-2S iron-sulfur cluster binding domain FCM34_09300 PF16870 2-oxoglutarate dehydrogenase C-terminal FCM34_09300 PF02779 Transketolase, pyrimidine binding domain FCM34_09300 PF16078 2-oxoglutarate dehydrogenase N-terminus FCM34_09300 PF00676 Dehydrogenase E1 component FCM34_09305 PF00364 Biotin-requiring enzyme FCM34_09305 PF02817 e3 binding domain FCM34_09305 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FCM34_09310 PF00549 CoA-ligase FCM34_09310 PF08442 ATP-grasp domain FCM34_09315 PF02629 CoA binding domain FCM34_09315 PF00549 CoA-ligase FCM34_09325 PF03692 Putative zinc- or iron-chelating domain FCM34_09330 PF01228 Glycine radical FCM34_09330 PF02901 Pyruvate formate lyase-like FCM34_09335 PF01226 Formate/nitrite transporter FCM34_09340 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FCM34_09340 PF18381 YcaO cyclodehydratase C-terminal domain FCM34_09350 PF00893 Small Multidrug Resistance protein FCM34_09355 PF01118 Semialdehyde dehydrogenase, NAD binding domain FCM34_09355 PF02774 Semialdehyde dehydrogenase, dimerisation domain FCM34_09360 PF00313 'Cold-shock' DNA-binding domain FCM34_09365 PF02617 ATP-dependent Clp protease adaptor protein ClpS FCM34_09370 PF02861 Clp amino terminal domain, pathogenicity island component FCM34_09370 PF17871 AAA lid domain FCM34_09370 PF10431 C-terminal, D2-small domain, of ClpB protein FCM34_09370 PF07724 AAA domain (Cdc48 subfamily) FCM34_09370 PF00004 ATPase family associated with various cellular activities (AAA) FCM34_09375 PF01176 Translation initiation factor 1A / IF-1 FCM34_09380 PF04376 Arginine-tRNA-protein transferase, N terminus FCM34_09380 PF04377 Arginine-tRNA-protein transferase, C terminus FCM34_09385 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FCM34_09390 PF05433 Glycine zipper 2TM domain FCM34_09395 PF00990 Diguanylate cyclase, GGDEF domain FCM34_09395 PF05230 MASE2 domain FCM34_09400 PF07992 Pyridine nucleotide-disulphide oxidoreductase FCM34_09405 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FCM34_09405 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FCM34_09410 PF01037 Lrp/AsnC ligand binding domain FCM34_09415 PF17854 FtsK alpha domain FCM34_09415 PF09397 Ftsk gamma domain FCM34_09415 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FCM34_09415 PF01580 FtsK/SpoIIIE family FCM34_09420 PF03548 Outer membrane lipoprotein carrier protein LolA FCM34_09425 PF00004 ATPase family associated with various cellular activities (AAA) FCM34_09425 PF16193 AAA C-terminal domain FCM34_09425 PF12002 MgsA AAA+ ATPase C terminal FCM34_09435 PF02403 Seryl-tRNA synthetase N-terminal domain FCM34_09435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FCM34_09440 PF02674 Colicin V production protein FCM34_09445 PF00156 Phosphoribosyl transferase domain FCM34_09450 PF00232 Glycosyl hydrolase family 1 FCM34_09455 PF02378 Phosphotransferase system, EIIC FCM34_09455 PF00367 phosphotransferase system, EIIB FCM34_09460 PF00356 Bacterial regulatory proteins, lacI family FCM34_09465 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FCM34_09470 PF00005 ABC transporter FCM34_09475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FCM34_09475 PF00005 ABC transporter FCM34_09480 PF12911 N-terminal TM domain of oligopeptide transport permease C FCM34_09480 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_09485 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_09490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FCM34_09495 PF02954 Bacterial regulatory protein, Fis family FCM34_09495 PF00158 Sigma-54 interaction domain FCM34_09500 PF04012 PspA/IM30 family FCM34_09505 PF06667 Phage shock protein B FCM34_09515 PF04317 YcjX-like family, DUF463 FCM34_09520 PF05128 Domain of unknown function (DUF697) FCM34_09525 PF00351 Biopterin-dependent aromatic amino acid hydroxylase FCM34_09530 PF01329 Pterin 4 alpha carbinolamine dehydratase FCM34_09535 PF18024 Helix-turn-helix domain FCM34_09535 PF00158 Sigma-54 interaction domain FCM34_09540 PF13689 YfiR/HmsC-like FCM34_09550 PF00691 OmpA family FCM34_09555 PF04055 Radical SAM superfamily FCM34_09560 PF13742 OB-fold nucleic acid binding domain FCM34_09560 PF02601 Exonuclease VII, large subunit FCM34_09580 PF12323 Helix-turn-helix domain FCM34_09580 PF07282 Putative transposase DNA-binding domain FCM34_09580 PF01385 Probable transposase FCM34_09595 PF00571 CBS domain FCM34_09595 PF00478 IMP dehydrogenase / GMP reductase domain FCM34_09600 PF00117 Glutamine amidotransferase class-I FCM34_09600 PF00958 GMP synthase C terminal domain FCM34_09600 PF02540 NAD synthase FCM34_09610 PF13356 Arm DNA-binding domain FCM34_09610 PF00589 Phage integrase family FCM34_09645 PF17273 Family of unknown function (DUF5338) FCM34_09690 PF05052 MerE protein FCM34_09695 PF13411 MerR HTH family regulatory protein FCM34_09700 PF03243 Alkylmercury lyase FCM34_09700 PF12324 Helix-turn-helix domain of alkylmercury lyase FCM34_09705 PF07992 Pyridine nucleotide-disulphide oxidoreductase FCM34_09705 PF00403 Heavy-metal-associated domain FCM34_09705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FCM34_09710 PF00403 Heavy-metal-associated domain FCM34_09715 PF02411 MerT mercuric transport protein FCM34_09725 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FCM34_09730 PF01636 Phosphotransferase enzyme family FCM34_09735 PF02796 Helix-turn-helix domain of resolvase FCM34_09735 PF00239 Resolvase, N terminal domain FCM34_09740 PF01526 Tn3 transposase DDE domain FCM34_09740 PF13700 Domain of unknown function (DUF4158) FCM34_09755 PF07690 Major Facilitator Superfamily FCM34_09760 PF03466 LysR substrate binding domain FCM34_09760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_09780 PF00561 alpha/beta hydrolase fold FCM34_09785 PF01494 FAD binding domain FCM34_09815 PF02028 BCCT, betaine/carnitine/choline family transporter FCM34_09820 PF04229 GrpB protein FCM34_09825 PF07693 KAP family P-loop domain FCM34_09830 PF02805 Metal binding domain of Ada FCM34_09830 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FCM34_09830 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FCM34_09830 PF12833 Helix-turn-helix domain FCM34_09850 PF01047 MarR family FCM34_09860 PF05724 Thiopurine S-methyltransferase (TPMT) FCM34_09865 PF16187 Middle or third domain of peptidase_M16 FCM34_09865 PF05193 Peptidase M16 inactive domain FCM34_09865 PF00675 Insulinase (Peptidase family M16) FCM34_09870 PF00300 Histidine phosphatase superfamily (branch 1) FCM34_09880 PF00892 EamA-like transporter family FCM34_09885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FCM34_09895 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FCM34_09900 PF17757 UvrB interaction domain FCM34_09900 PF03461 TRCF domain FCM34_09900 PF00271 Helicase conserved C-terminal domain FCM34_09900 PF00270 DEAD/DEAH box helicase FCM34_09900 PF02559 CarD-like/TRCF domain FCM34_09910 PF02687 FtsX-like permease family FCM34_09910 PF12704 MacB-like periplasmic core domain FCM34_09915 PF00005 ABC transporter FCM34_09920 PF02687 FtsX-like permease family FCM34_09920 PF12704 MacB-like periplasmic core domain FCM34_09940 PF05698 Bacterial trigger factor protein (TF) C-terminus FCM34_09940 PF05697 Bacterial trigger factor protein (TF) FCM34_09940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FCM34_09945 PF00574 Clp protease FCM34_09950 PF06689 ClpX C4-type zinc finger FCM34_09950 PF10431 C-terminal, D2-small domain, of ClpB protein FCM34_09950 PF07724 AAA domain (Cdc48 subfamily) FCM34_09955 PF00004 ATPase family associated with various cellular activities (AAA) FCM34_09955 PF05362 Lon protease (S16) C-terminal proteolytic domain FCM34_09955 PF02190 ATP-dependent protease La (LON) substrate-binding domain FCM34_09960 PF00216 Bacterial DNA-binding protein FCM34_09965 PF13145 PPIC-type PPIASE domain FCM34_09970 PF00005 ABC transporter FCM34_09970 PF12848 ABC transporter FCM34_09975 PF00474 Sodium:solute symporter family FCM34_09980 PF04341 Protein of unknown function, DUF485 FCM34_09995 PF00378 Enoyl-CoA hydratase/isomerase FCM34_10000 PF01235 Sodium:alanine symporter family FCM34_10010 PF06167 Glucose-regulated metallo-peptidase M90 FCM34_10015 PF01184 GPR1/FUN34/yaaH family FCM34_10025 PF09278 MerR, DNA binding FCM34_10025 PF00376 MerR family regulatory protein FCM34_10030 PF00682 HMGL-like FCM34_10035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FCM34_10035 PF00364 Biotin-requiring enzyme FCM34_10035 PF00289 Biotin carboxylase, N-terminal domain FCM34_10035 PF02785 Biotin carboxylase C-terminal domain FCM34_10040 PF00378 Enoyl-CoA hydratase/isomerase FCM34_10045 PF01039 Carboxyl transferase domain FCM34_10050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FCM34_10050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FCM34_10050 PF02770 Acyl-CoA dehydrogenase, middle domain FCM34_10055 PF00171 Aldehyde dehydrogenase family FCM34_10060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FCM34_10060 PF02770 Acyl-CoA dehydrogenase, middle domain FCM34_10060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FCM34_10065 PF00378 Enoyl-CoA hydratase/isomerase FCM34_10070 PF00378 Enoyl-CoA hydratase/isomerase FCM34_10075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FCM34_10075 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FCM34_10085 PF13520 Amino acid permease FCM34_10090 PF01925 Sulfite exporter TauE/SafE FCM34_10115 PF00239 Resolvase, N terminal domain FCM34_10115 PF02796 Helix-turn-helix domain of resolvase FCM34_10140 PF00589 Phage integrase family FCM34_10140 PF14659 Phage integrase, N-terminal SAM-like domain FCM34_10145 PF00665 Integrase core domain FCM34_10145 PF02796 Helix-turn-helix domain of resolvase FCM34_10155 PF01695 IstB-like ATP binding protein FCM34_10180 PF02384 N-6 DNA Methylase FCM34_10210 PF04002 RadC-like JAB domain FCM34_10220 PF02796 Helix-turn-helix domain of resolvase FCM34_10220 PF00239 Resolvase, N terminal domain FCM34_10245 PF12706 Beta-lactamase superfamily domain FCM34_10250 PF02653 Branched-chain amino acid transport system / permease component FCM34_10255 PF02653 Branched-chain amino acid transport system / permease component FCM34_10260 PF00005 ABC transporter FCM34_10265 PF13407 Periplasmic binding protein domain FCM34_10270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_10270 PF03466 LysR substrate binding domain FCM34_10285 PF02634 FdhD/NarQ family FCM34_10290 PF00384 Molybdopterin oxidoreductase FCM34_10295 PF00990 Diguanylate cyclase, GGDEF domain FCM34_10295 PF00072 Response regulator receiver domain FCM34_10300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_10300 PF03466 LysR substrate binding domain FCM34_10305 PF00232 Glycosyl hydrolase family 1 FCM34_10315 PF03466 LysR substrate binding domain FCM34_10315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_10325 PF00933 Glycosyl hydrolase family 3 N terminal domain FCM34_10330 PF01261 Xylose isomerase-like TIM barrel FCM34_10335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FCM34_10335 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FCM34_10340 PF03466 LysR substrate binding domain FCM34_10340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_10350 PF03279 Bacterial lipid A biosynthesis acyltransferase FCM34_10355 PF03279 Bacterial lipid A biosynthesis acyltransferase FCM34_10365 PF02678 Pirin FCM34_10365 PF05726 Pirin C-terminal cupin domain FCM34_10370 PF00136 DNA polymerase family B FCM34_10370 PF03104 DNA polymerase family B, exonuclease domain FCM34_10400 PF01554 MatE FCM34_10405 PF06786 Uncharacterised protein family (UPF0253) FCM34_10410 PF00677 Lumazine binding domain FCM34_10425 PF13419 Haloacid dehalogenase-like hydrolase FCM34_10430 PF01370 NAD dependent epimerase/dehydratase family FCM34_10430 PF02222 ATP-grasp domain FCM34_10435 PF00892 EamA-like transporter family FCM34_10440 PF02525 Flavodoxin-like fold FCM34_10475 PF17783 CvfB-like winged helix domain FCM34_10475 PF13509 S1 domain FCM34_10485 PF04269 Protein of unknown function, DUF440 FCM34_10490 PF00912 Transglycosylase FCM34_10495 PF04269 Protein of unknown function, DUF440 FCM34_10500 PF03776 Septum formation topological specificity factor MinE FCM34_10505 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FCM34_10510 PF03775 Septum formation inhibitor MinC, C-terminal domain FCM34_10510 PF05209 Septum formation inhibitor MinC, N-terminal domain FCM34_10515 PF05166 YcgL domain FCM34_10520 PF13406 Transglycosylase SLT domain FCM34_10525 PF03313 Serine dehydratase alpha chain FCM34_10525 PF03315 Serine dehydratase beta chain FCM34_10535 PF03315 Serine dehydratase beta chain FCM34_10535 PF03313 Serine dehydratase alpha chain FCM34_10540 PF06865 Pyrimidine/purine nucleoside phosphorylase FCM34_10545 PF00375 Sodium:dicarboxylate symporter family FCM34_10550 PF00376 MerR family regulatory protein FCM34_10550 PF09278 MerR, DNA binding FCM34_10555 PF02803 Thiolase, C-terminal domain FCM34_10555 PF00108 Thiolase, N-terminal domain FCM34_10560 PF08668 HDOD domain FCM34_10560 PF00563 EAL domain FCM34_10565 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FCM34_10570 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FCM34_10580 PF08281 Sigma-70, region 4 FCM34_10580 PF04542 Sigma-70 region 2 FCM34_10605 PF01882 Protein of unknown function DUF58 FCM34_10610 PF07726 ATPase family associated with various cellular activities (AAA) FCM34_10610 PF17863 AAA lid domain FCM34_10615 PF02803 Thiolase, C-terminal domain FCM34_10615 PF00108 Thiolase, N-terminal domain FCM34_10620 PF00378 Enoyl-CoA hydratase/isomerase FCM34_10620 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FCM34_10620 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FCM34_10630 PF07152 YaeQ protein FCM34_10640 PF07690 Major Facilitator Superfamily FCM34_10645 PF00005 ABC transporter FCM34_10650 PF01032 FecCD transport family FCM34_10665 PF05433 Glycine zipper 2TM domain FCM34_10690 PF13280 WYL domain FCM34_10690 PF08279 HTH domain FCM34_10700 PF01502 Phosphoribosyl-AMP cyclohydrolase FCM34_10700 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FCM34_10705 PF00977 Histidine biosynthesis protein FCM34_10710 PF01627 Hpt domain FCM34_10710 PF00512 His Kinase A (phospho-acceptor) domain FCM34_10710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_10710 PF00072 Response regulator receiver domain FCM34_10720 PF00072 Response regulator receiver domain FCM34_10725 PF00977 Histidine biosynthesis protein FCM34_10730 PF00117 Glutamine amidotransferase class-I FCM34_10735 PF08645 Polynucleotide kinase 3 phosphatase FCM34_10735 PF00475 Imidazoleglycerol-phosphate dehydratase FCM34_10740 PF00155 Aminotransferase class I and II FCM34_10745 PF00815 Histidinol dehydrogenase FCM34_10750 PF08029 HisG, C-terminal domain FCM34_10750 PF01634 ATP phosphoribosyltransferase FCM34_10760 PF13307 Helicase C-terminal domain FCM34_10760 PF04851 Type III restriction enzyme, res subunit FCM34_10765 PF00814 Glycoprotease family FCM34_10775 PF00561 alpha/beta hydrolase fold FCM34_10780 PF13193 AMP-binding enzyme C-terminal domain FCM34_10780 PF00501 AMP-binding enzyme FCM34_10785 PF01612 3'-5' exonuclease FCM34_10785 PF00570 HRDC domain FCM34_10795 PF00892 EamA-like transporter family FCM34_10805 PF01207 Dihydrouridine synthase (Dus) FCM34_10810 PF04304 Protein of unknown function (DUF454) FCM34_10815 PF00156 Phosphoribosyl transferase domain FCM34_10820 PF12169 DNA polymerase III subunits gamma and tau domain III FCM34_10820 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FCM34_10820 PF12170 DNA polymerase III tau subunit V interacting with alpha FCM34_10825 PF02575 YbaB/EbfC DNA-binding family FCM34_10830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_10830 PF03466 LysR substrate binding domain FCM34_10835 PF02678 Pirin FCM34_10835 PF05726 Pirin C-terminal cupin domain FCM34_10845 PF00196 Bacterial regulatory proteins, luxR family FCM34_10845 PF00072 Response regulator receiver domain FCM34_10855 PF00271 Helicase conserved C-terminal domain FCM34_10855 PF00270 DEAD/DEAH box helicase FCM34_10855 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FCM34_10855 PF04408 Helicase associated domain (HA2) FCM34_10855 PF11898 Domain of unknown function (DUF3418) FCM34_10865 PF01386 Ribosomal L25p family FCM34_10870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_10870 PF00672 HAMP domain FCM34_10870 PF00072 Response regulator receiver domain FCM34_10870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FCM34_10870 PF01627 Hpt domain FCM34_10870 PF00512 His Kinase A (phospho-acceptor) domain FCM34_10880 PF00753 Metallo-beta-lactamase superfamily FCM34_10890 PF00586 AIR synthase related protein, N-terminal domain FCM34_10890 PF02769 AIR synthase related protein, C-terminal domain FCM34_10905 PF17785 PUA-like domain FCM34_10905 PF10672 S-adenosylmethionine-dependent methyltransferase FCM34_10910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_10910 PF00672 HAMP domain FCM34_10910 PF12729 Four helix bundle sensory module for signal transduction FCM34_10915 PF00708 Acylphosphatase FCM34_10925 PF08264 Anticodon-binding domain of tRNA FCM34_10925 PF09334 tRNA synthetases class I (M) FCM34_10925 PF01588 Putative tRNA binding domain FCM34_10930 PF10609 NUBPL iron-transfer P-loop NTPase FCM34_10935 PF00485 Phosphoribulokinase / Uridine kinase family FCM34_10940 PF00692 dUTPase FCM34_10945 PF01384 Phosphate transporter family FCM34_10950 PF00575 S1 RNA binding domain FCM34_10950 PF10150 Ribonuclease E/G family FCM34_10950 PF12111 Polyribonucleotide phosphorylase C terminal FCM34_10955 PF01479 S4 domain FCM34_10955 PF00849 RNA pseudouridylate synthase FCM34_10960 PF02545 Maf-like protein FCM34_10970 PF02620 Large ribosomal RNA subunit accumulation protein YceD FCM34_10975 PF01783 Ribosomal L32p protein family FCM34_10980 PF02504 Fatty acid synthesis protein FCM34_10985 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FCM34_10985 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FCM34_10990 PF00698 Acyl transferase domain FCM34_11000 PF00550 Phosphopantetheine attachment site FCM34_11005 PF02801 Beta-ketoacyl synthase, C-terminal domain FCM34_11005 PF00109 Beta-ketoacyl synthase, N-terminal domain FCM34_11010 PF01063 Amino-transferase class IV FCM34_11015 PF02618 YceG-like family FCM34_11020 PF02223 Thymidylate kinase FCM34_11025 PF09115 DNA polymerase III, delta subunit, C terminal FCM34_11030 PF01026 TatD related DNase FCM34_11035 PF00589 Phage integrase family FCM34_11045 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FCM34_11045 PF01189 16S rRNA methyltransferase RsmB/F FCM34_11045 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF FCM34_11050 PF02470 MlaD protein FCM34_11055 PF04403 Paraquat-inducible protein A FCM34_11065 PF07130 YebG protein FCM34_11075 PF05362 Lon protease (S16) C-terminal proteolytic domain FCM34_11075 PF13654 AAA domain FCM34_11080 PF07977 FabA-like domain FCM34_11085 PF04957 Ribosome modulation factor FCM34_11105 PF02926 THUMP domain FCM34_11105 PF10672 S-adenosylmethionine-dependent methyltransferase FCM34_11105 PF01170 Putative RNA methylase family UPF0020 FCM34_11110 PF07126 Cell-division protein ZapC FCM34_11115 PF01180 Dihydroorotate dehydrogenase FCM34_11120 PF05088 Bacterial NAD-glutamate dehydrogenase FCM34_11130 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FCM34_11130 PF11940 Domain of unknown function (DUF3458) Ig-like fold FCM34_11130 PF01433 Peptidase family M1 domain FCM34_11135 PF03572 Peptidase family S41 FCM34_11135 PF00595 PDZ domain FCM34_11135 PF11818 C-terminal domain of tail specific protease (DUF3340) FCM34_11135 PF17804 Tail specific protease N-terminal domain FCM34_11140 PF17516 ProQ C-terminal domain FCM34_11140 PF04352 ProQ/FINO family FCM34_11145 PF13185 GAF domain FCM34_11160 PF00115 Cytochrome C and Quinol oxidase polypeptide I FCM34_11175 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FCM34_11175 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FCM34_11185 PF00403 Heavy-metal-associated domain FCM34_11200 PF00027 Cyclic nucleotide-binding domain FCM34_11200 PF13545 Crp-like helix-turn-helix domain FCM34_11205 PF00582 Universal stress protein family FCM34_11210 PF01171 PP-loop family FCM34_11225 PF00043 Glutathione S-transferase, C-terminal domain FCM34_11225 PF02798 Glutathione S-transferase, N-terminal domain FCM34_11230 PF05025 RbsD / FucU transport protein family FCM34_11235 PF00005 ABC transporter FCM34_11240 PF02653 Branched-chain amino acid transport system / permease component FCM34_11245 PF13407 Periplasmic binding protein domain FCM34_11250 PF00294 pfkB family carbohydrate kinase FCM34_11255 PF00356 Bacterial regulatory proteins, lacI family FCM34_11265 PF12729 Four helix bundle sensory module for signal transduction FCM34_11265 PF00672 HAMP domain FCM34_11265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_11275 PF01695 IstB-like ATP binding protein FCM34_11290 PF13610 DDE domain FCM34_11295 PF01636 Phosphotransferase enzyme family FCM34_11300 PF13610 DDE domain FCM34_11330 PF00809 Pterin binding enzyme FCM34_11335 PF00893 Small Multidrug Resistance protein FCM34_11340 PF13427 Domain of unknown function (DUF4111) FCM34_11340 PF01909 Nucleotidyltransferase domain FCM34_11345 PF00905 Penicillin binding protein transpeptidase domain FCM34_11350 PF00132 Bacterial transferase hexapeptide (six repeats) FCM34_11355 PF06442 R67 dihydrofolate reductase FCM34_11360 PF13495 Phage integrase, N-terminal SAM-like domain FCM34_11360 PF00589 Phage integrase family FCM34_11370 PF00239 Resolvase, N terminal domain FCM34_11370 PF02796 Helix-turn-helix domain of resolvase FCM34_11385 PF02909 Tetracyclin repressor-like, C-terminal domain FCM34_11385 PF00440 Bacterial regulatory proteins, tetR family FCM34_11390 PF07690 Major Facilitator Superfamily FCM34_11395 PF00892 EamA-like transporter family FCM34_11415 PF12323 Helix-turn-helix domain FCM34_11415 PF01385 Probable transposase FCM34_11415 PF07282 Putative transposase DNA-binding domain FCM34_11430 PF02146 Sir2 family FCM34_11445 PF00512 His Kinase A (phospho-acceptor) domain FCM34_11445 PF09456 RcsC Alpha-Beta-Loop (ABL) FCM34_11445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_11445 PF00072 Response regulator receiver domain FCM34_11450 PF00216 Bacterial DNA-binding protein FCM34_11455 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FCM34_11455 PF01588 Putative tRNA binding domain FCM34_11455 PF03484 tRNA synthetase B5 domain FCM34_11455 PF03483 B3/4 domain FCM34_11455 PF03147 Ferredoxin-fold anticodon binding domain FCM34_11460 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FCM34_11460 PF01409 tRNA synthetases class II core domain (F) FCM34_11465 PF00453 Ribosomal protein L20 FCM34_11470 PF01632 Ribosomal protein L35 FCM34_11475 PF00707 Translation initiation factor IF-3, C-terminal domain FCM34_11475 PF05198 Translation initiation factor IF-3, N-terminal domain FCM34_11480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FCM34_11480 PF02824 TGS domain FCM34_11480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FCM34_11480 PF03129 Anticodon binding domain FCM34_11495 PF04055 Radical SAM superfamily FCM34_11500 PF00521 DNA gyrase/topoisomerase IV, subunit A FCM34_11500 PF03989 DNA gyrase C-terminal domain, beta-propeller FCM34_11510 PF13419 Haloacid dehalogenase-like hydrolase FCM34_11515 PF03477 ATP cone domain FCM34_11515 PF02867 Ribonucleotide reductase, barrel domain FCM34_11515 PF00317 Ribonucleotide reductase, all-alpha domain FCM34_11520 PF00268 Ribonucleotide reductase, small chain FCM34_11525 PF00111 2Fe-2S iron-sulfur cluster binding domain FCM34_11530 PF03562 MltA specific insert domain FCM34_11530 PF06725 3D domain FCM34_11535 PF06945 Protein of unknown function (DUF1289) FCM34_11540 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FCM34_11540 PF02378 Phosphotransferase system, EIIC FCM34_11545 PF00294 pfkB family carbohydrate kinase FCM34_11550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FCM34_11550 PF00381 PTS HPr component phosphorylation site FCM34_11555 PF00356 Bacterial regulatory proteins, lacI family FCM34_11555 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FCM34_11560 PF03222 Tryptophan/tyrosine permease family FCM34_11575 PF00271 Helicase conserved C-terminal domain FCM34_11575 PF00270 DEAD/DEAH box helicase FCM34_11585 PF01264 Chorismate synthase FCM34_11590 PF05175 Methyltransferase small domain FCM34_11595 PF01713 Smr domain FCM34_11630 PF08274 PhnA Zinc-Ribbon FCM34_11630 PF03831 PhnA domain FCM34_11690 PF05036 Sporulation related domain FCM34_11690 PF03330 Lytic transglycolase FCM34_11695 PF04310 MukB N-terminal FCM34_11695 PF16330 MukB hinge domain FCM34_11700 PF04288 MukE-like family FCM34_11705 PF17192 MukF middle domain FCM34_11705 PF17193 MukF C-terminal domain FCM34_11705 PF03882 MukF winged-helix domain FCM34_11715 PF02698 DUF218 domain FCM34_11720 PF00121 Triosephosphate isomerase FCM34_11725 PF00365 Phosphofructokinase FCM34_11745 PF01546 Peptidase family M20/M25/M40 FCM34_11745 PF07687 Peptidase dimerisation domain FCM34_11750 PF13419 Haloacid dehalogenase-like hydrolase FCM34_11755 PF02789 Cytosol aminopeptidase family, N-terminal domain FCM34_11755 PF00883 Cytosol aminopeptidase family, catalytic domain FCM34_11795 PF11398 Protein of unknown function (DUF2813) FCM34_11810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_11810 PF03466 LysR substrate binding domain FCM34_11815 PF01925 Sulfite exporter TauE/SafE FCM34_11825 PF07478 D-ala D-ala ligase C-terminus FCM34_11825 PF01820 D-ala D-ala ligase N-terminus FCM34_11835 PF00255 Glutathione peroxidase FCM34_11840 PF00271 Helicase conserved C-terminal domain FCM34_11840 PF00270 DEAD/DEAH box helicase FCM34_11845 PF00583 Acetyltransferase (GNAT) family FCM34_11860 PF01928 CYTH domain FCM34_11870 PF13673 Acetyltransferase (GNAT) domain FCM34_11875 PF03992 Antibiotic biosynthesis monooxygenase FCM34_11880 PF08543 Phosphomethylpyrimidine kinase FCM34_11900 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FCM34_11900 PF00561 alpha/beta hydrolase fold FCM34_11905 PF01575 MaoC like domain FCM34_11930 PF00664 ABC transporter transmembrane region FCM34_11930 PF00005 ABC transporter FCM34_11935 PF00005 ABC transporter FCM34_11935 PF00664 ABC transporter transmembrane region FCM34_11940 PF00672 HAMP domain FCM34_11940 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FCM34_11940 PF01627 Hpt domain FCM34_11940 PF00072 Response regulator receiver domain FCM34_11940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_11940 PF00512 His Kinase A (phospho-acceptor) domain FCM34_11945 PF00085 Thioredoxin FCM34_11950 PF00939 Sodium:sulfate symporter transmembrane region FCM34_11960 PF00343 Carbohydrate phosphorylase FCM34_11985 PF00425 chorismate binding enzyme FCM34_11985 PF04715 Anthranilate synthase component I, N terminal region FCM34_11990 PF00293 NUDIX domain FCM34_11995 PF03222 Tryptophan/tyrosine permease family FCM34_12000 PF00375 Sodium:dicarboxylate symporter family FCM34_12005 PF09382 RQC domain FCM34_12005 PF00570 HRDC domain FCM34_12005 PF00270 DEAD/DEAH box helicase FCM34_12005 PF00271 Helicase conserved C-terminal domain FCM34_12005 PF16124 RecQ zinc-binding FCM34_12010 PF06798 PrkA serine protein kinase C-terminal domain FCM34_12010 PF08298 PrkA AAA domain FCM34_12015 PF04285 Protein of unknown function (DUF444) FCM34_12020 PF04293 SpoVR like protein FCM34_12025 PF00392 Bacterial regulatory proteins, gntR family FCM34_12025 PF07840 FadR C-terminal domain FCM34_12030 PF06450 Bacterial Na+/H+ antiporter B (NhaB) FCM34_12035 PF02600 Disulfide bond formation protein DsbB FCM34_12040 PF09335 SNARE associated Golgi protein FCM34_12050 PF00271 Helicase conserved C-terminal domain FCM34_12050 PF12344 Ultra-violet resistance protein B FCM34_12050 PF17757 UvrB interaction domain FCM34_12050 PF04851 Type III restriction enzyme, res subunit FCM34_12050 PF02151 UvrB/uvrC motif FCM34_12065 PF06826 Predicted Permease Membrane Region FCM34_12065 PF02080 TrkA-C domain FCM34_12070 PF01551 Peptidase family M23 FCM34_12070 PF10145 Phage-related minor tail protein FCM34_12070 PF01464 Transglycosylase SLT domain FCM34_12090 PF00072 Response regulator receiver domain FCM34_12100 PF01047 MarR family FCM34_12100 PF00480 ROK family FCM34_12105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_12105 PF00672 HAMP domain FCM34_12105 PF17200 Single Cache domain 2 FCM34_12110 PF02810 SEC-C motif FCM34_12115 PF01266 FAD dependent oxidoreductase FCM34_12115 PF04324 BFD-like [2Fe-2S] binding domain FCM34_12120 PF00890 FAD binding domain FCM34_12125 PF13183 4Fe-4S dicluster domain FCM34_12125 PF02754 Cysteine-rich domain FCM34_12140 PF13006 Insertion element 4 transposase N-terminal FCM34_12140 PF01609 Transposase DDE domain FCM34_12145 PF02335 Cytochrome c552 FCM34_12150 PF13435 Cytochrome c554 and c-prime FCM34_12150 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) FCM34_12155 PF00037 4Fe-4S binding domain FCM34_12155 PF13247 4Fe-4S dicluster domain FCM34_12160 PF03916 Polysulphide reductase, NrfD FCM34_12165 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FCM34_12165 PF01578 Cytochrome C assembly protein FCM34_12170 PF08534 Redoxin FCM34_12175 PF03918 Cytochrome C biogenesis protein FCM34_12180 PF00768 D-alanyl-D-alanine carboxypeptidase FCM34_12190 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FCM34_12195 PF01266 FAD dependent oxidoreductase FCM34_12205 PF07969 Amidohydrolase family FCM34_12210 PF00478 IMP dehydrogenase / GMP reductase domain FCM34_12210 PF00571 CBS domain FCM34_12220 PF08267 Cobalamin-independent synthase, N-terminal domain FCM34_12220 PF01717 Cobalamin-independent synthase, Catalytic domain FCM34_12225 PF03466 LysR substrate binding domain FCM34_12225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_12235 PF00593 TonB dependent receptor FCM34_12235 PF07715 TonB-dependent Receptor Plug Domain FCM34_12240 PF17158 Membrane-associated sensor, integral membrane domain FCM34_12240 PF00990 Diguanylate cyclase, GGDEF domain FCM34_12245 PF00563 EAL domain FCM34_12245 PF12792 CSS motif domain associated with EAL FCM34_12250 PF12833 Helix-turn-helix domain FCM34_12250 PF02311 AraC-like ligand binding domain FCM34_12255 PF03466 LysR substrate binding domain FCM34_12255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_12260 PF13460 NAD(P)H-binding FCM34_12270 PF01053 Cys/Met metabolism PLP-dependent enzyme FCM34_12275 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FCM34_12275 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FCM34_12305 PF08241 Methyltransferase domain FCM34_12315 PF02646 RmuC family FCM34_12370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_12370 PF00672 HAMP domain FCM34_12400 PF17866 AAA lid domain FCM34_12400 PF00004 ATPase family associated with various cellular activities (AAA) FCM34_12420 PF13592 Winged helix-turn helix FCM34_12420 PF13358 DDE superfamily endonuclease FCM34_12470 PF03783 Curli production assembly/transport component CsgG FCM34_12480 PF10627 Curli assembly protein CsgE FCM34_12485 PF00196 Bacterial regulatory proteins, luxR family FCM34_12500 PF05598 Transposase domain (DUF772) FCM34_12500 PF01609 Transposase DDE domain FCM34_12575 PF13657 HipA N-terminal domain FCM34_12575 PF07804 HipA-like C-terminal domain FCM34_12590 PF00141 Peroxidase FCM34_12600 PF08220 DeoR-like helix-turn-helix domain FCM34_12600 PF00455 DeoR C terminal sensor domain FCM34_12625 PF10722 Putative bacterial sensory transduction regulator FCM34_12635 PF00265 Thymidine kinase FCM34_12640 PF03553 Na+/H+ antiporter family FCM34_12645 PF00816 H-NS histone family FCM34_12650 PF01923 Cobalamin adenosyltransferase FCM34_12655 PF12843 Putative quorum-sensing-regulated virulence factor FCM34_12660 PF04055 Radical SAM superfamily FCM34_12665 PF06508 Queuosine biosynthesis protein QueC FCM34_12680 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FCM34_12685 PF18073 Rubredoxin metal binding domain FCM34_12695 PF00216 Bacterial DNA-binding protein FCM34_12700 PF00575 S1 RNA binding domain FCM34_12705 PF02224 Cytidylate kinase FCM34_12710 PF00925 GTP cyclohydrolase II FCM34_12715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_12715 PF03466 LysR substrate binding domain FCM34_12720 PF07690 Major Facilitator Superfamily FCM34_12735 PF00881 Nitroreductase family FCM34_12740 PF03806 AbgT putative transporter family FCM34_12745 PF00990 Diguanylate cyclase, GGDEF domain FCM34_12745 PF13188 PAS domain FCM34_12745 PF03707 Bacterial signalling protein N terminal repeat FCM34_12745 PF00563 EAL domain FCM34_12755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_12755 PF03466 LysR substrate binding domain FCM34_12760 PF00072 Response regulator receiver domain FCM34_12760 PF00486 Transcriptional regulatory protein, C terminal FCM34_12770 PF01212 Beta-eliminating lyase FCM34_12785 PF00248 Aldo/keto reductase family FCM34_12790 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) FCM34_12800 PF03411 Penicillin-insensitive murein endopeptidase FCM34_12810 PF04536 TPM domain FCM34_12835 PF01618 MotA/TolQ/ExbB proton channel family FCM34_12840 PF13677 Membrane MotB of proton-channel complex MotA/MotB FCM34_12840 PF00691 OmpA family FCM34_12845 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FCM34_12850 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FCM34_12855 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FCM34_12855 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FCM34_12865 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FCM34_12865 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FCM34_12870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FCM34_12870 PF00384 Molybdopterin oxidoreductase FCM34_12870 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FCM34_12875 PF00146 NADH dehydrogenase FCM34_12880 PF12838 4Fe-4S dicluster domain FCM34_12885 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FCM34_12890 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FCM34_12895 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FCM34_12895 PF00361 Proton-conducting membrane transporter FCM34_12900 PF00361 Proton-conducting membrane transporter FCM34_12905 PF00361 Proton-conducting membrane transporter FCM34_12915 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FCM34_12915 PF02769 AIR synthase related protein, C-terminal domain FCM34_12915 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FCM34_12920 PF01464 Transglycosylase SLT domain FCM34_12920 PF00497 Bacterial extracellular solute-binding proteins, family 3 FCM34_12925 PF07191 zinc-ribbons FCM34_12930 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FCM34_12930 PF01926 50S ribosome-binding GTPase FCM34_12935 PF13360 PQQ-like domain FCM34_12940 PF09976 Tetratricopeptide repeat-like domain FCM34_12945 PF03129 Anticodon binding domain FCM34_12945 PF13393 Histidyl-tRNA synthetase FCM34_12950 PF04551 GcpE protein FCM34_12955 PF13464 Domain of unknown function (DUF4115) FCM34_12965 PF04055 Radical SAM superfamily FCM34_12970 PF00334 Nucleoside diphosphate kinase FCM34_12975 PF00883 Cytosol aminopeptidase family, catalytic domain FCM34_12975 PF12404 Peptidase FCM34_12980 PF00883 Cytosol aminopeptidase family, catalytic domain FCM34_12980 PF12404 Peptidase FCM34_12985 PF00111 2Fe-2S iron-sulfur cluster binding domain FCM34_12990 PF00012 Hsp70 protein FCM34_12995 PF07743 HSCB C-terminal oligomerisation domain FCM34_12995 PF00226 DnaJ domain FCM34_13000 PF01521 Iron-sulphur cluster biosynthesis FCM34_13005 PF01592 NifU-like N terminal domain FCM34_13010 PF00266 Aminotransferase class-V FCM34_13015 PF02082 Transcriptional regulator FCM34_13020 PF00588 SpoU rRNA Methylase family FCM34_13045 PF07719 Tetratricopeptide repeat FCM34_13045 PF13181 Tetratricopeptide repeat FCM34_13050 PF00581 Rhodanese-like domain FCM34_13055 PF02355 Protein export membrane protein FCM34_13055 PF07549 SecD/SecF GG Motif FCM34_13060 PF07549 SecD/SecF GG Motif FCM34_13060 PF13721 SecD export protein N-terminal TM region FCM34_13060 PF02355 Protein export membrane protein FCM34_13065 PF02699 Preprotein translocase subunit FCM34_13070 PF01702 Queuine tRNA-ribosyltransferase FCM34_13075 PF02547 Queuosine biosynthesis protein FCM34_13080 PF00571 CBS domain FCM34_13085 PF00578 AhpC/TSA family FCM34_13085 PF10417 C-terminal domain of 1-Cys peroxiredoxin FCM34_13090 PF13192 Thioredoxin domain FCM34_13090 PF07992 Pyridine nucleotide-disulphide oxidoreductase FCM34_13095 PF07690 Major Facilitator Superfamily FCM34_13115 PF02347 Glycine cleavage system P-protein FCM34_13120 PF01597 Glycine cleavage H-protein FCM34_13125 PF01571 Aminomethyltransferase folate-binding domain FCM34_13125 PF08669 Glycine cleavage T-protein C-terminal barrel domain FCM34_13130 PF01494 FAD binding domain FCM34_13135 PF01494 FAD binding domain FCM34_13140 PF03695 Uncharacterised protein family (UPF0149) FCM34_13145 PF05164 Cell division protein ZapA FCM34_13155 PF07690 Major Facilitator Superfamily FCM34_13160 PF00005 ABC transporter FCM34_13160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FCM34_13165 PF12911 N-terminal TM domain of oligopeptide transport permease C FCM34_13165 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_13170 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_13180 PF02798 Glutathione S-transferase, N-terminal domain FCM34_13180 PF00043 Glutathione S-transferase, C-terminal domain FCM34_13185 PF00043 Glutathione S-transferase, C-terminal domain FCM34_13185 PF02798 Glutathione S-transferase, N-terminal domain FCM34_13195 PF00459 Inositol monophosphatase family FCM34_13200 PF18393 MotY N-terminal domain FCM34_13200 PF00691 OmpA family FCM34_13205 PF00672 HAMP domain FCM34_13205 PF12729 Four helix bundle sensory module for signal transduction FCM34_13205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_13210 PF00929 Exonuclease FCM34_13215 PF03553 Na+/H+ antiporter family FCM34_13215 PF13726 Na+-H+ antiporter family FCM34_13220 PF07690 Major Facilitator Superfamily FCM34_13225 PF03466 LysR substrate binding domain FCM34_13225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_13230 PF00990 Diguanylate cyclase, GGDEF domain FCM34_13230 PF00563 EAL domain FCM34_13230 PF08448 PAS fold FCM34_13230 PF08447 PAS fold FCM34_13240 PF00271 Helicase conserved C-terminal domain FCM34_13240 PF03880 DbpA RNA binding domain FCM34_13240 PF00270 DEAD/DEAH box helicase FCM34_13245 PF03061 Thioesterase superfamily FCM34_13255 PF02913 FAD linked oxidases, C-terminal domain FCM34_13255 PF13183 4Fe-4S dicluster domain FCM34_13255 PF01565 FAD binding domain FCM34_13270 PF03741 Integral membrane protein TerC family FCM34_13270 PF03471 Transporter associated domain FCM34_13275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FCM34_13280 PF08240 Alcohol dehydrogenase GroES-like domain FCM34_13280 PF00107 Zinc-binding dehydrogenase FCM34_13285 PF00962 Adenosine/AMP deaminase FCM34_13290 PF13344 Haloacid dehalogenase-like hydrolase FCM34_13300 PF00733 Asparagine synthase FCM34_13300 PF13537 Glutamine amidotransferase domain FCM34_13315 PF02798 Glutathione S-transferase, N-terminal domain FCM34_13315 PF14497 Glutathione S-transferase, C-terminal domain FCM34_13325 PF04209 homogentisate 1,2-dioxygenase FCM34_13330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FCM34_13340 PF00849 RNA pseudouridylate synthase FCM34_13345 PF00990 Diguanylate cyclase, GGDEF domain FCM34_13345 PF13426 PAS domain FCM34_13345 PF00563 EAL domain FCM34_13350 PF08447 PAS fold FCM34_13350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_13360 PF00285 Citrate synthase, C-terminal domain FCM34_13365 PF00694 Aconitase C-terminal domain FCM34_13365 PF00330 Aconitase family (aconitate hydratase) FCM34_13370 PF04303 PrpF protein FCM34_13380 PF07715 TonB-dependent Receptor Plug Domain FCM34_13380 PF07660 Secretin and TonB N terminus short domain FCM34_13380 PF00593 TonB dependent receptor FCM34_13390 PF01027 Inhibitor of apoptosis-promoting Bax1 FCM34_13395 PF12805 FUSC-like inner membrane protein yccS FCM34_13400 PF04358 DsrC like protein FCM34_13405 PF05036 Sporulation related domain FCM34_13410 PF08245 Mur ligase middle domain FCM34_13410 PF02875 Mur ligase family, glutamate ligase domain FCM34_13415 PF17848 Acetyl-coA carboxylase zinc finger domain FCM34_13415 PF01039 Carboxyl transferase domain FCM34_13420 PF01416 tRNA pseudouridine synthase FCM34_13430 PF01118 Semialdehyde dehydrogenase, NAD binding domain FCM34_13430 PF02774 Semialdehyde dehydrogenase, dimerisation domain FCM34_13435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FCM34_13435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FCM34_13435 PF11890 Domain of unknown function (DUF3410) FCM34_13445 PF03180 NLPA lipoprotein FCM34_13465 PF00005 ABC transporter FCM34_13470 PF02896 PEP-utilising enzyme, TIM barrel domain FCM34_13470 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FCM34_13470 PF00391 PEP-utilising enzyme, mobile domain FCM34_13475 PF03618 Kinase/pyrophosphorylase FCM34_13485 PF00324 Amino acid permease FCM34_13550 PF03412 Peptidase C39 family FCM34_13550 PF00005 ABC transporter FCM34_13550 PF00664 ABC transporter transmembrane region FCM34_13555 PF16199 Radical_SAM C-terminal domain FCM34_13555 PF04055 Radical SAM superfamily FCM34_13560 PF04898 Glutamate synthase central domain FCM34_13560 PF01645 Conserved region in glutamate synthase FCM34_13560 PF01493 GXGXG motif FCM34_13560 PF00310 Glutamine amidotransferases class-II FCM34_13565 PF07992 Pyridine nucleotide-disulphide oxidoreductase FCM34_13565 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FCM34_13585 PF14521 Lysine-specific metallo-endopeptidase FCM34_13595 PF00271 Helicase conserved C-terminal domain FCM34_13595 PF00270 DEAD/DEAH box helicase FCM34_13615 PF07759 Protein of unknown function (DUF1615) FCM34_13620 PF00990 Diguanylate cyclase, GGDEF domain FCM34_13625 PF08502 LeuA allosteric (dimerisation) domain FCM34_13625 PF00682 HMGL-like FCM34_13630 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FCM34_13630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FCM34_13630 PF02142 MGS-like domain FCM34_13635 PF00117 Glutamine amidotransferase class-I FCM34_13635 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FCM34_13640 PF05173 Dihydrodipicolinate reductase, C-terminus FCM34_13640 PF01113 Dihydrodipicolinate reductase, N-terminus FCM34_13650 PF01812 5-formyltetrahydrofolate cyclo-ligase family FCM34_13655 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FCM34_13660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FCM34_13660 PF01842 ACT domain FCM34_13660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FCM34_13665 PF01219 Prokaryotic diacylglycerol kinase FCM34_13670 PF00793 DAHP synthetase I family FCM34_13675 PF00005 ABC transporter FCM34_13680 PF01032 FecCD transport family FCM34_13695 PF00437 Type II/IV secretion system protein FCM34_13705 PF02421 Ferrous iron transport protein B FCM34_13705 PF17910 FeoB cytosolic helical domain FCM34_13705 PF07670 Nucleoside recognition FCM34_13705 PF07664 Ferrous iron transport protein B C terminus FCM34_13715 PF01253 Translation initiation factor SUI1 FCM34_13720 PF01169 Uncharacterized protein family UPF0016 FCM34_13755 PF13185 GAF domain FCM34_13755 PF00990 Diguanylate cyclase, GGDEF domain FCM34_13760 PF05598 Transposase domain (DUF772) FCM34_13760 PF01609 Transposase DDE domain FCM34_13795 PF01406 tRNA synthetases class I (C) catalytic domain FCM34_13795 PF09190 DALR domain FCM34_13800 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FCM34_13810 PF00149 Calcineurin-like phosphoesterase FCM34_13815 PF04226 Transglycosylase associated protein FCM34_13820 PF16925 Tetracyclin repressor-like, C-terminal domain FCM34_13820 PF00440 Bacterial regulatory proteins, tetR family FCM34_13825 PF08240 Alcohol dehydrogenase GroES-like domain FCM34_13825 PF00107 Zinc-binding dehydrogenase FCM34_13840 PF08447 PAS fold FCM34_13840 PF13426 PAS domain FCM34_13840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_13860 PF01066 CDP-alcohol phosphatidyltransferase FCM34_13865 PF01541 GIY-YIG catalytic domain FCM34_13865 PF02151 UvrB/uvrC motif FCM34_13865 PF08459 UvrC Helix-hairpin-helix N-terminal FCM34_13870 PF00196 Bacterial regulatory proteins, luxR family FCM34_13870 PF00072 Response regulator receiver domain FCM34_13875 PF02348 Cytidylyltransferase FCM34_13880 PF03966 Trm112p-like protein FCM34_13885 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FCM34_13890 PF00005 ABC transporter FCM34_13890 PF00664 ABC transporter transmembrane region FCM34_13895 PF03772 Competence protein FCM34_13895 PF00753 Metallo-beta-lactamase superfamily FCM34_13910 PF05872 Bacterial protein of unknown function (DUF853) FCM34_13915 PF13006 Insertion element 4 transposase N-terminal FCM34_13915 PF01609 Transposase DDE domain FCM34_13920 PF00155 Aminotransferase class I and II FCM34_13930 PF13609 Gram-negative porin FCM34_13935 PF06733 DEAD_2 FCM34_13935 PF13307 Helicase C-terminal domain FCM34_13945 PF00850 Histone deacetylase domain FCM34_13950 PF07690 Major Facilitator Superfamily FCM34_13955 PF01926 50S ribosome-binding GTPase FCM34_13960 PF00245 Alkaline phosphatase FCM34_13965 PF00245 Alkaline phosphatase FCM34_13980 PF14760 Rnk N-terminus FCM34_13980 PF01272 Transcription elongation factor, GreA/GreB, C-term FCM34_13985 PF00990 Diguanylate cyclase, GGDEF domain FCM34_13985 PF08448 PAS fold FCM34_13990 PF00497 Bacterial extracellular solute-binding proteins, family 3 FCM34_13995 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_14000 PF00005 ABC transporter FCM34_14010 PF04116 Fatty acid hydroxylase superfamily FCM34_14015 PF13520 Amino acid permease FCM34_14020 PF02607 B12 binding domain FCM34_14020 PF00809 Pterin binding enzyme FCM34_14020 PF02965 Vitamin B12 dependent methionine synthase, activation domain FCM34_14020 PF02310 B12 binding domain FCM34_14020 PF02574 Homocysteine S-methyltransferase FCM34_14030 PF00571 CBS domain FCM34_14030 PF03471 Transporter associated domain FCM34_14030 PF01595 Cyclin M transmembrane N-terminal domain FCM34_14035 PF01895 PhoU domain FCM34_14045 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_14050 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_14055 PF14437 MafB19-like deaminase FCM34_14065 PF01274 Malate synthase FCM34_14070 PF00463 Isocitrate lyase family FCM34_14075 PF00308 Bacterial dnaA protein FCM34_14090 PF02769 AIR synthase related protein, C-terminal domain FCM34_14090 PF00586 AIR synthase related protein, N-terminal domain FCM34_14095 PF00551 Formyl transferase FCM34_14100 PF01784 NIF3 (NGG1p interacting factor 3) FCM34_14105 PF00158 Sigma-54 interaction domain FCM34_14105 PF02954 Bacterial regulatory protein, Fis family FCM34_14110 PF00989 PAS fold FCM34_14110 PF00512 His Kinase A (phospho-acceptor) domain FCM34_14110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_14115 PF02954 Bacterial regulatory protein, Fis family FCM34_14115 PF00072 Response regulator receiver domain FCM34_14115 PF00158 Sigma-54 interaction domain FCM34_14125 PF01842 ACT domain FCM34_14130 PF17941 Polyphosphate kinase C-terminal domain 1 FCM34_14130 PF13089 Polyphosphate kinase N-terminal domain FCM34_14130 PF13090 Polyphosphate kinase C-terminal domain 2 FCM34_14130 PF02503 Polyphosphate kinase middle domain FCM34_14135 PF02541 Ppx/GppA phosphatase family FCM34_14145 PF12323 Helix-turn-helix domain FCM34_14145 PF07282 Putative transposase DNA-binding domain FCM34_14145 PF01385 Probable transposase FCM34_14155 PF00571 CBS domain FCM34_14155 PF03448 MgtE intracellular N domain FCM34_14155 PF01769 Divalent cation transporter FCM34_14160 PF12323 Helix-turn-helix domain FCM34_14175 PF07196 Flagellin hook IN motif FCM34_14175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FCM34_14180 PF10135 Rod binding protein FCM34_14180 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FCM34_14185 PF02119 Flagellar P-ring protein FCM34_14190 PF02107 Flagellar L-ring protein FCM34_14195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FCM34_14195 PF00460 Flagella basal body rod protein FCM34_14200 PF00460 Flagella basal body rod protein FCM34_14200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FCM34_14205 PF00460 Flagella basal body rod protein FCM34_14205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FCM34_14205 PF07559 Flagellar basal body protein FlaE FCM34_14215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FCM34_14215 PF00460 Flagella basal body rod protein FCM34_14220 PF00460 Flagella basal body rod protein FCM34_14225 PF03705 CheR methyltransferase, all-alpha domain FCM34_14225 PF01739 CheR methyltransferase, SAM binding domain FCM34_14230 PF00072 Response regulator receiver domain FCM34_14230 PF01584 CheW-like domain FCM34_14235 PF13144 Chaperone for flagella basal body P-ring formation FCM34_14250 PF12850 Calcineurin-like phosphoesterase superfamily domain FCM34_14255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FCM34_14265 PF00849 RNA pseudouridylate synthase FCM34_14265 PF01479 S4 domain FCM34_14270 PF01966 HD domain FCM34_14275 PF00892 EamA-like transporter family FCM34_14280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FCM34_14305 PF00313 'Cold-shock' DNA-binding domain FCM34_14310 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FCM34_14310 PF00364 Biotin-requiring enzyme FCM34_14310 PF02817 e3 binding domain FCM34_14315 PF02779 Transketolase, pyrimidine binding domain FCM34_14315 PF02780 Transketolase, C-terminal domain FCM34_14320 PF00676 Dehydrogenase E1 component FCM34_14325 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FCM34_14335 PF05472 DNA replication terminus site-binding protein (Ter protein) FCM34_14340 PF00176 SNF2 family N-terminal domain FCM34_14340 PF00271 Helicase conserved C-terminal domain FCM34_14340 PF04434 SWIM zinc finger FCM34_14345 PF04337 Protein of unknown function, DUF480 FCM34_14375 PF06082 Exopolysaccharide biosynthesis protein YbjH FCM34_14395 PF13807 G-rich domain on putative tyrosine kinase FCM34_14395 PF13614 AAA domain FCM34_14395 PF02706 Chain length determinant protein FCM34_14405 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FCM34_14405 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FCM34_14405 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FCM34_14410 PF01370 NAD dependent epimerase/dehydratase family FCM34_14415 PF00534 Glycosyl transferases group 1 FCM34_14455 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FCM34_14460 PF00132 Bacterial transferase hexapeptide (six repeats) FCM34_14465 PF05523 WxcM-like, C-terminal FCM34_14470 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FCM34_14475 PF00483 Nucleotidyl transferase FCM34_14480 PF04321 RmlD substrate binding domain FCM34_14485 PF16363 GDP-mannose 4,6 dehydratase FCM34_14490 PF00953 Glycosyl transferase family 4 FCM34_14495 PF01548 Transposase FCM34_14495 PF02371 Transposase IS116/IS110/IS902 family FCM34_14510 PF00665 Integrase core domain FCM34_14515 PF01695 IstB-like ATP binding protein FCM34_14525 PF17203 Single cache domain 3 FCM34_14525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_14525 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FCM34_14525 PF00989 PAS fold FCM34_14530 PF02685 Glucokinase FCM34_14535 PF01380 SIS domain FCM34_14535 PF01418 Helix-turn-helix domain, rpiR family FCM34_14540 PF00224 Pyruvate kinase, barrel domain FCM34_14540 PF02887 Pyruvate kinase, alpha/beta domain FCM34_14550 PF00873 AcrB/AcrD/AcrF family FCM34_14555 PF09317 Domain of unknown function (DUF1974) FCM34_14555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FCM34_14555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FCM34_14555 PF02770 Acyl-CoA dehydrogenase, middle domain FCM34_14560 PF00440 Bacterial regulatory proteins, tetR family FCM34_14645 PF01695 IstB-like ATP binding protein FCM34_14670 PF03466 LysR substrate binding domain FCM34_14670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_14675 PF03358 NADPH-dependent FMN reductase FCM34_14685 PF01717 Cobalamin-independent synthase, Catalytic domain FCM34_14700 PF04002 RadC-like JAB domain FCM34_14755 PF02321 Outer membrane efflux protein FCM34_14760 PF00873 AcrB/AcrD/AcrF family FCM34_14765 PF00529 HlyD membrane-fusion protein of T1SS FCM34_14765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FCM34_14770 PF08361 MAATS-type transcriptional repressor, C-terminal region FCM34_14770 PF00440 Bacterial regulatory proteins, tetR family FCM34_14795 PF01479 S4 domain FCM34_14795 PF00849 RNA pseudouridylate synthase FCM34_14800 PF04079 Segregation and condensation complex subunit ScpB FCM34_14805 PF02616 Segregation and condensation protein ScpA FCM34_14810 PF01300 Telomere recombination FCM34_14815 PF02811 PHP domain FCM34_14820 PF00425 chorismate binding enzyme FCM34_14820 PF04715 Anthranilate synthase component I, N terminal region FCM34_14825 PF00117 Glutamine amidotransferase class-I FCM34_14825 PF02885 Glycosyl transferase family, helical bundle domain FCM34_14825 PF00591 Glycosyl transferase family, a/b domain FCM34_14830 PF00591 Glycosyl transferase family, a/b domain FCM34_14830 PF02885 Glycosyl transferase family, helical bundle domain FCM34_14835 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FCM34_14835 PF00218 Indole-3-glycerol phosphate synthase FCM34_14840 PF00291 Pyridoxal-phosphate dependent enzyme FCM34_14845 PF00290 Tryptophan synthase alpha chain FCM34_14855 PF00700 Bacterial flagellin C-terminal helical region FCM34_14855 PF00669 Bacterial flagellin N-terminal helical region FCM34_14855 PF07196 Flagellin hook IN motif FCM34_14870 PF13358 DDE superfamily endonuclease FCM34_14870 PF13592 Winged helix-turn helix FCM34_14880 PF01381 Helix-turn-helix FCM34_14910 PF03466 LysR substrate binding domain FCM34_14910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_14920 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FCM34_14925 PF00005 ABC transporter FCM34_14930 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_14935 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FCM34_14940 PF07237 Protein of unknown function (DUF1428) FCM34_14945 PF07690 Major Facilitator Superfamily FCM34_14950 PF01040 UbiA prenyltransferase family FCM34_14955 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FCM34_14960 PF00510 Cytochrome c oxidase subunit III FCM34_14965 PF00115 Cytochrome C and Quinol oxidase polypeptide I FCM34_14970 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FCM34_14970 PF06481 COX Aromatic Rich Motif FCM34_14975 PF02627 Carboxymuconolactone decarboxylase family FCM34_14980 PF03466 LysR substrate binding domain FCM34_14980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_14990 PF01156 Inosine-uridine preferring nucleoside hydrolase FCM34_15000 PF01047 MarR family FCM34_15015 PF00127 Copper binding proteins, plastocyanin/azurin family FCM34_15020 PF02424 ApbE family FCM34_15030 PF00072 Response regulator receiver domain FCM34_15040 PF03372 Endonuclease/Exonuclease/phosphatase family FCM34_15050 PF00529 HlyD membrane-fusion protein of T1SS FCM34_15050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FCM34_15055 PF00873 AcrB/AcrD/AcrF family FCM34_15070 PF10437 Bacterial lipoate protein ligase C-terminus FCM34_15070 PF03099 Biotin/lipoate A/B protein ligase family FCM34_15075 PF03707 Bacterial signalling protein N terminal repeat FCM34_15075 PF00990 Diguanylate cyclase, GGDEF domain FCM34_15075 PF00563 EAL domain FCM34_15080 PF00873 AcrB/AcrD/AcrF family FCM34_15095 PF04143 Sulphur transport FCM34_15100 PF01022 Bacterial regulatory protein, arsR family FCM34_15110 PF07992 Pyridine nucleotide-disulphide oxidoreductase FCM34_15120 PF02308 MgtC family FCM34_15125 PF00356 Bacterial regulatory proteins, lacI family FCM34_15125 PF13407 Periplasmic binding protein domain FCM34_15130 PF08244 Glycosyl hydrolases family 32 C terminal FCM34_15130 PF00251 Glycosyl hydrolases family 32 N-terminal domain FCM34_15135 PF02378 Phosphotransferase system, EIIC FCM34_15135 PF00367 phosphotransferase system, EIIB FCM34_15140 PF00294 pfkB family carbohydrate kinase FCM34_15145 PF11471 Maltoporin periplasmic N-terminal extension FCM34_15145 PF02264 LamB porin FCM34_15150 PF00684 DnaJ central domain FCM34_15150 PF01556 DnaJ C terminal domain FCM34_15150 PF00226 DnaJ domain FCM34_15155 PF00012 Hsp70 protein FCM34_15160 PF01025 GrpE FCM34_15165 PF01513 ATP-NAD kinase FCM34_15170 PF17158 Membrane-associated sensor, integral membrane domain FCM34_15170 PF00990 Diguanylate cyclase, GGDEF domain FCM34_15175 PF02463 RecF/RecN/SMC N terminal domain FCM34_15185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FCM34_15190 PF00005 ABC transporter FCM34_15190 PF02687 FtsX-like permease family FCM34_15190 PF12704 MacB-like periplasmic core domain FCM34_15195 PF02321 Outer membrane efflux protein FCM34_15200 PF04954 Siderophore-interacting protein FCM34_15200 PF08021 Siderophore-interacting FAD-binding domain FCM34_15205 PF00793 DAHP synthetase I family FCM34_15210 PF00816 H-NS histone family FCM34_15215 PF03466 LysR substrate binding domain FCM34_15215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_15220 PF00291 Pyridoxal-phosphate dependent enzyme FCM34_15230 PF00180 Isocitrate/isopropylmalate dehydrogenase FCM34_15260 PF00583 Acetyltransferase (GNAT) family FCM34_15265 PF00849 RNA pseudouridylate synthase FCM34_15270 PF00293 NUDIX domain FCM34_15280 PF04356 Protein of unknown function (DUF489) FCM34_15285 PF00206 Lyase FCM34_15285 PF08328 Adenylosuccinate lyase C-terminal FCM34_15290 PF08007 Cupin superfamily protein FCM34_15295 PF00224 Pyruvate kinase, barrel domain FCM34_15295 PF02887 Pyruvate kinase, alpha/beta domain FCM34_15300 PF12795 Mechanosensitive ion channel porin domain FCM34_15300 PF12794 Mechanosensitive ion channel inner membrane domain 1 FCM34_15300 PF00924 Mechanosensitive ion channel FCM34_15305 PF01810 LysE type translocator FCM34_15310 PF10282 Lactonase, 7-bladed beta-propeller FCM34_15320 PF00860 Permease family FCM34_15330 PF00390 Malic enzyme, N-terminal domain FCM34_15330 PF03949 Malic enzyme, NAD binding domain FCM34_15335 PF12804 MobA-like NTP transferase domain FCM34_15340 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FCM34_15345 PF04632 Fusaric acid resistance protein family FCM34_15360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_15360 PF13426 PAS domain FCM34_15360 PF08447 PAS fold FCM34_15380 PF05114 Protein of unknown function (DUF692) FCM34_15390 PF02028 BCCT, betaine/carnitine/choline family transporter FCM34_15405 PF01609 Transposase DDE domain FCM34_15405 PF05598 Transposase domain (DUF772) FCM34_15420 PF13474 SnoaL-like domain FCM34_15425 PF14821 Threonine synthase N terminus FCM34_15425 PF00291 Pyridoxal-phosphate dependent enzyme FCM34_15430 PF00288 GHMP kinases N terminal domain FCM34_15430 PF08544 GHMP kinases C terminal FCM34_15435 PF01842 ACT domain FCM34_15435 PF00742 Homoserine dehydrogenase FCM34_15435 PF13840 ACT domain FCM34_15435 PF00696 Amino acid kinase family FCM34_15435 PF03447 Homoserine dehydrogenase, NAD binding domain FCM34_15445 PF00588 SpoU rRNA Methylase family FCM34_15450 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) FCM34_15465 PF03737 Aldolase/RraA FCM34_15475 PF00072 Response regulator receiver domain FCM34_15475 PF00486 Transcriptional regulatory protein, C terminal FCM34_15490 PF00005 ABC transporter FCM34_15490 PF00664 ABC transporter transmembrane region FCM34_15495 PF00005 ABC transporter FCM34_15495 PF00664 ABC transporter transmembrane region FCM34_15515 PF18389 TrmO C-terminal domain FCM34_15515 PF01980 tRNA-methyltransferase O FCM34_15520 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FCM34_15520 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FCM34_15530 PF00004 ATPase family associated with various cellular activities (AAA) FCM34_15530 PF17862 AAA+ lid domain FCM34_15530 PF06480 FtsH Extracellular FCM34_15530 PF01434 Peptidase family M41 FCM34_15535 PF00291 Pyridoxal-phosphate dependent enzyme FCM34_15540 PF00381 PTS HPr component phosphorylation site FCM34_15545 PF05524 PEP-utilising enzyme, N-terminal FCM34_15545 PF00391 PEP-utilising enzyme, mobile domain FCM34_15545 PF02896 PEP-utilising enzyme, TIM barrel domain FCM34_15550 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FCM34_15555 PF01292 Prokaryotic cytochrome b561 FCM34_15565 PF00149 Calcineurin-like phosphoesterase FCM34_15565 PF12320 Type 5 capsule protein repressor C-terminal domain FCM34_15570 PF00583 Acetyltransferase (GNAT) family FCM34_15575 PF04381 Putative exonuclease, RdgC FCM34_15590 PF02254 TrkA-N domain FCM34_15590 PF00999 Sodium/hydrogen exchanger family FCM34_15595 PF00158 Sigma-54 interaction domain FCM34_15595 PF00072 Response regulator receiver domain FCM34_15595 PF02954 Bacterial regulatory protein, Fis family FCM34_15625 PF01266 FAD dependent oxidoreductase FCM34_15630 PF01381 Helix-turn-helix FCM34_15630 PF07883 Cupin domain FCM34_15635 PF00171 Aldehyde dehydrogenase family FCM34_15640 PF00202 Aminotransferase class-III FCM34_15645 PF00324 Amino acid permease FCM34_15650 PF13520 Amino acid permease FCM34_15660 PF02690 Na+/Pi-cotransporter FCM34_15665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FCM34_15665 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FCM34_15670 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FCM34_15680 PF10725 Protein of unknown function (DUF2517) FCM34_15700 PF09308 LuxQ, periplasmic FCM34_15700 PF00072 Response regulator receiver domain FCM34_15700 PF00512 His Kinase A (phospho-acceptor) domain FCM34_15700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_15710 PF03734 L,D-transpeptidase catalytic domain FCM34_15710 PF01476 LysM domain FCM34_15710 PF17969 L,D-transpeptidase C-terminal domain FCM34_15725 PF05971 RNA methyltransferase FCM34_15730 PF00877 NlpC/P60 family FCM34_15735 PF01648 4'-phosphopantetheinyl transferase superfamily FCM34_15740 PF00085 Thioredoxin FCM34_15750 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FCM34_15755 PF01842 ACT domain FCM34_15755 PF00551 Formyl transferase FCM34_15765 PF13396 Phospholipase_D-nuclease N-terminal FCM34_15765 PF13091 PLD-like domain FCM34_15780 PF10145 Phage-related minor tail protein FCM34_15780 PF01551 Peptidase family M23 FCM34_15780 PF01464 Transglycosylase SLT domain FCM34_15790 PF02075 Crossover junction endodeoxyribonuclease RuvC FCM34_15795 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FCM34_15865 PF04055 Radical SAM superfamily FCM34_15865 PF08497 Radical SAM N-terminal FCM34_15865 PF11842 Domain of unknown function (DUF3362) FCM34_15870 PF00873 AcrB/AcrD/AcrF family FCM34_15880 PF00990 Diguanylate cyclase, GGDEF domain FCM34_15880 PF17158 Membrane-associated sensor, integral membrane domain FCM34_15885 PF01734 Patatin-like phospholipase FCM34_15890 PF00209 Sodium:neurotransmitter symporter family FCM34_15905 PF01389 OmpA-like transmembrane domain FCM34_15905 PF00691 OmpA family FCM34_15910 PF01389 OmpA-like transmembrane domain FCM34_15910 PF00691 OmpA family FCM34_15915 PF01389 OmpA-like transmembrane domain FCM34_15915 PF00691 OmpA family FCM34_15920 PF03949 Malic enzyme, NAD binding domain FCM34_15920 PF00390 Malic enzyme, N-terminal domain FCM34_15925 PF12833 Helix-turn-helix domain FCM34_15930 PF01554 MatE FCM34_15935 PF10692 Protein of unknown function (DUF2498) FCM34_15940 PF00072 Response regulator receiver domain FCM34_15940 PF00990 Diguanylate cyclase, GGDEF domain FCM34_15945 PF00860 Permease family FCM34_15955 PF01235 Sodium:alanine symporter family FCM34_15960 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FCM34_15960 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FCM34_15965 PF01699 Sodium/calcium exchanger protein FCM34_15970 PF08534 Redoxin FCM34_15975 PF00293 NUDIX domain FCM34_15985 PF00005 ABC transporter FCM34_15990 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_15995 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_16000 PF00497 Bacterial extracellular solute-binding proteins, family 3 FCM34_16015 PF00005 ABC transporter FCM34_16020 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FCM34_16020 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FCM34_16035 PF03932 CutC family FCM34_16040 PF00480 ROK family FCM34_16050 PF01435 Peptidase family M48 FCM34_16055 PF12849 PBP superfamily domain FCM34_16060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_16060 PF00512 His Kinase A (phospho-acceptor) domain FCM34_16060 PF00989 PAS fold FCM34_16060 PF11808 Phosphate regulon sensor protein PhoR FCM34_16065 PF00072 Response regulator receiver domain FCM34_16065 PF00486 Transcriptional regulatory protein, C terminal FCM34_16070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FCM34_16075 PF00990 Diguanylate cyclase, GGDEF domain FCM34_16075 PF07694 5TMR of 5TMR-LYT FCM34_16085 PF00171 Aldehyde dehydrogenase family FCM34_16095 PF00892 EamA-like transporter family FCM34_16105 PF00248 Aldo/keto reductase family FCM34_16115 PF00072 Response regulator receiver domain FCM34_16115 PF12431 Transcriptional regulator FCM34_16120 PF00989 PAS fold FCM34_16120 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FCM34_16120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_16120 PF17203 Single cache domain 3 FCM34_16125 PF01047 MarR family FCM34_16130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FCM34_16130 PF00529 HlyD membrane-fusion protein of T1SS FCM34_16150 PF01679 Proteolipid membrane potential modulator FCM34_16160 PF13597 Anaerobic ribonucleoside-triphosphate reductase FCM34_16160 PF03477 ATP cone domain FCM34_16175 PF12826 Helix-hairpin-helix motif FCM34_16175 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FCM34_16175 PF00533 BRCA1 C Terminus (BRCT) domain FCM34_16175 PF01653 NAD-dependent DNA ligase adenylation domain FCM34_16175 PF03120 NAD-dependent DNA ligase OB-fold domain FCM34_16180 PF04354 ZipA, C-terminal FtsZ-binding domain FCM34_16185 PF06470 SMC proteins Flexible Hinge Domain FCM34_16185 PF02463 RecF/RecN/SMC N terminal domain FCM34_16195 PF03458 UPF0126 domain FCM34_16205 PF05951 Bacterial protein of unknown function (DUF882) FCM34_16210 PF03734 L,D-transpeptidase catalytic domain FCM34_16210 PF01471 Putative peptidoglycan binding domain FCM34_16225 PF00535 Glycosyl transferase family 2 FCM34_16240 PF00128 Alpha amylase, catalytic domain FCM34_16250 PF00072 Response regulator receiver domain FCM34_16250 PF00196 Bacterial regulatory proteins, luxR family FCM34_16275 PF02254 TrkA-N domain FCM34_16275 PF00999 Sodium/hydrogen exchanger family FCM34_16275 PF02080 TrkA-C domain FCM34_16280 PF00990 Diguanylate cyclase, GGDEF domain FCM34_16285 PF09179 TilS substrate binding domain FCM34_16285 PF11734 TilS substrate C-terminal domain FCM34_16285 PF01171 PP-loop family FCM34_16290 PF05649 Peptidase family M13 FCM34_16290 PF01431 Peptidase family M13 FCM34_16300 PF16326 ABC transporter C-terminal domain FCM34_16300 PF12848 ABC transporter FCM34_16300 PF00005 ABC transporter FCM34_16305 PF13302 Acetyltransferase (GNAT) domain FCM34_16310 PF13520 Amino acid permease FCM34_16320 PF03466 LysR substrate binding domain FCM34_16320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_16330 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FCM34_16335 PF01336 OB-fold nucleic acid binding domain FCM34_16335 PF02811 PHP domain FCM34_16335 PF14579 Helix-hairpin-helix motif FCM34_16335 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FCM34_16335 PF07733 Bacterial DNA polymerase III alpha NTPase domain FCM34_16340 PF01351 Ribonuclease HII FCM34_16345 PF02684 Lipid-A-disaccharide synthetase FCM34_16350 PF00132 Bacterial transferase hexapeptide (six repeats) FCM34_16350 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FCM34_16355 PF07977 FabA-like domain FCM34_16360 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FCM34_16360 PF00132 Bacterial transferase hexapeptide (six repeats) FCM34_16365 PF03938 Outer membrane protein (OmpH-like) FCM34_16370 PF01103 Surface antigen FCM34_16370 PF07244 Surface antigen variable number repeat FCM34_16375 PF17820 PDZ domain FCM34_16375 PF02163 Peptidase family M50 FCM34_16380 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FCM34_16380 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FCM34_16380 PF13288 DXP reductoisomerase C-terminal domain FCM34_16390 PF01255 Putative undecaprenyl diphosphate synthase FCM34_16395 PF01765 Ribosome recycling factor FCM34_16400 PF00696 Amino acid kinase family FCM34_16405 PF00889 Elongation factor TS FCM34_16410 PF00318 Ribosomal protein S2 FCM34_16415 PF00557 Metallopeptidase family M24 FCM34_16420 PF01909 Nucleotidyltransferase domain FCM34_16420 PF01966 HD domain FCM34_16420 PF08335 GlnD PII-uridylyltransferase FCM34_16420 PF01842 ACT domain FCM34_16425 PF00132 Bacterial transferase hexapeptide (six repeats) FCM34_16425 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FCM34_16425 PF14602 Hexapeptide repeat of succinyl-transferase FCM34_16430 PF11944 Protein of unknown function (DUF3461) FCM34_16435 PF02378 Phosphotransferase system, EIIC FCM34_16435 PF00367 phosphotransferase system, EIIB FCM34_16440 PF07148 Maltose operon periplasmic protein precursor (MalM) FCM34_16445 PF02264 LamB porin FCM34_16450 PF00258 Flavodoxin FCM34_16455 PF00849 RNA pseudouridylate synthase FCM34_16460 PF04287 tRNA pseudouridine synthase C FCM34_16485 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) FCM34_16490 PF07348 Syd protein (SUKH-2) FCM34_16495 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FCM34_16495 PF14489 QueF-like protein FCM34_16505 PF00990 Diguanylate cyclase, GGDEF domain FCM34_16510 PF03641 Possible lysine decarboxylase FCM34_16510 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FCM34_16510 PF11892 Domain of unknown function (DUF3412) FCM34_16515 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FCM34_16515 PF01367 5'-3' exonuclease, C-terminal SAM fold FCM34_16520 PF18324 Hypothetical protein TT1725 FCM34_16520 PF00180 Isocitrate/isopropylmalate dehydrogenase FCM34_16530 PF18125 RlmM ferredoxin-like domain FCM34_16530 PF01728 FtsJ-like methyltransferase FCM34_16545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_16545 PF03466 LysR substrate binding domain FCM34_16550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_16550 PF00672 HAMP domain FCM34_16555 PF11799 impB/mucB/samB family C-terminal domain FCM34_16555 PF00817 impB/mucB/samB family FCM34_16555 PF11798 IMS family HHH motif FCM34_16570 PF02424 ApbE family FCM34_16575 PF00111 2Fe-2S iron-sulfur cluster binding domain FCM34_16575 PF00970 Oxidoreductase FAD-binding domain FCM34_16575 PF00175 Oxidoreductase NAD-binding domain FCM34_16580 PF02508 Rnf-Nqr subunit, membrane protein FCM34_16585 PF02508 Rnf-Nqr subunit, membrane protein FCM34_16590 PF04205 FMN-binding domain FCM34_16595 PF03116 NQR2, RnfD, RnfE family FCM34_16600 PF11973 NQRA C-terminal domain FCM34_16600 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) FCM34_16605 PF01722 BolA-like protein FCM34_16610 PF05175 Methyltransferase small domain FCM34_16620 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FCM34_16630 PF07690 Major Facilitator Superfamily FCM34_16635 PF03502 Nucleoside-specific channel-forming protein, Tsx FCM34_16640 PF04461 Protein of unknown function (DUF520) FCM34_16645 PF08546 Ketopantoate reductase PanE/ApbA C terminal FCM34_16645 PF02558 Ketopantoate reductase PanE/ApbA FCM34_16650 PF01965 DJ-1/PfpI family FCM34_16655 PF00916 Sulfate permease family FCM34_16655 PF01740 STAS domain FCM34_16660 PF00512 His Kinase A (phospho-acceptor) domain FCM34_16660 PF00672 HAMP domain FCM34_16660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_16665 PF00072 Response regulator receiver domain FCM34_16665 PF00486 Transcriptional regulatory protein, C terminal FCM34_16670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FCM34_16670 PF00529 HlyD membrane-fusion protein of T1SS FCM34_16675 PF00873 AcrB/AcrD/AcrF family FCM34_16690 PF16363 GDP-mannose 4,6 dehydratase FCM34_16695 PF00175 Oxidoreductase NAD-binding domain FCM34_16695 PF00970 Oxidoreductase FAD-binding domain FCM34_16695 PF00042 Globin FCM34_16700 PF03063 Prismane/CO dehydrogenase family FCM34_16705 PF00210 Ferritin-like domain FCM34_16745 PF00106 short chain dehydrogenase FCM34_16755 PF03441 FAD binding domain of DNA photolyase FCM34_16755 PF00875 DNA photolyase FCM34_16760 PF13411 MerR HTH family regulatory protein FCM34_16765 PF08349 Protein of unknown function (DUF1722) FCM34_16790 PF00800 Prephenate dehydratase FCM34_16790 PF01817 Chorismate mutase type II FCM34_16815 PF03976 Polyphosphate kinase 2 (PPK2) FCM34_16820 PF07995 Glucose / Sorbosone dehydrogenase FCM34_16830 PF08220 DeoR-like helix-turn-helix domain FCM34_16830 PF00455 DeoR C terminal sensor domain FCM34_16835 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FCM34_16835 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FCM34_16840 PF07005 Sugar-binding N-terminal domain FCM34_16840 PF17042 Nucleotide-binding C-terminal domain FCM34_16845 PF00596 Class II Aldolase and Adducin N-terminal domain FCM34_16850 PF01261 Xylose isomerase-like TIM barrel FCM34_16855 PF01370 NAD dependent epimerase/dehydratase family FCM34_16860 PF02447 GntP family permease FCM34_16870 PF00672 HAMP domain FCM34_16870 PF02743 Cache domain FCM34_16870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_16875 PF03573 outer membrane porin, OprD family FCM34_16885 PF00106 short chain dehydrogenase FCM34_16895 PF01381 Helix-turn-helix FCM34_16925 PF01420 Type I restriction modification DNA specificity domain FCM34_16930 PF02384 N-6 DNA Methylase FCM34_16930 PF12161 HsdM N-terminal domain FCM34_16935 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) FCM34_16935 PF00271 Helicase conserved C-terminal domain FCM34_16935 PF08463 EcoEI R protein C-terminal FCM34_16935 PF04851 Type III restriction enzyme, res subunit FCM34_16965 PF01590 GAF domain FCM34_16965 PF00360 Phytochrome region FCM34_16965 PF00563 EAL domain FCM34_16965 PF00990 Diguanylate cyclase, GGDEF domain FCM34_16970 PF02796 Helix-turn-helix domain of resolvase FCM34_16970 PF00239 Resolvase, N terminal domain FCM34_17005 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FCM34_17010 PF02805 Metal binding domain of Ada FCM34_17010 PF00730 HhH-GPD superfamily base excision DNA repair protein FCM34_17010 PF12833 Helix-turn-helix domain FCM34_17010 PF06029 AlkA N-terminal domain FCM34_17015 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FCM34_17015 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FCM34_17025 PF06906 Protein of unknown function (DUF1272) FCM34_17035 PF01136 Peptidase family U32 FCM34_17035 PF12392 Collagenase FCM34_17040 PF01810 LysE type translocator FCM34_17045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_17045 PF03466 LysR substrate binding domain FCM34_17085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FCM34_17085 PF00384 Molybdopterin oxidoreductase FCM34_17085 PF01568 Molydopterin dinucleotide binding domain FCM34_17090 PF03916 Polysulphide reductase, NrfD FCM34_17095 PF13247 4Fe-4S dicluster domain FCM34_17100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_17100 PF00512 His Kinase A (phospho-acceptor) domain FCM34_17100 PF00989 PAS fold FCM34_17105 PF00072 Response regulator receiver domain FCM34_17105 PF00196 Bacterial regulatory proteins, luxR family FCM34_17110 PF03575 Peptidase family S51 FCM34_17115 PF07690 Major Facilitator Superfamily FCM34_17120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FCM34_17120 PF00529 HlyD membrane-fusion protein of T1SS FCM34_17130 PF10415 Fumarase C C-terminus FCM34_17130 PF00206 Lyase FCM34_17150 PF01168 Alanine racemase, N-terminal domain FCM34_17150 PF00842 Alanine racemase, C-terminal domain FCM34_17155 PF00772 DnaB-like helicase N terminal domain FCM34_17155 PF03796 DnaB-like helicase C terminal domain FCM34_17165 PF00149 Calcineurin-like phosphoesterase FCM34_17165 PF02872 5'-nucleotidase, C-terminal domain FCM34_17185 PF02954 Bacterial regulatory protein, Fis family FCM34_17185 PF00072 Response regulator receiver domain FCM34_17185 PF00158 Sigma-54 interaction domain FCM34_17190 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FCM34_17190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FCM34_17200 PF04102 SlyX FCM34_17205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FCM34_17210 PF09526 Probable metal-binding protein (DUF2387) FCM34_17220 PF01584 CheW-like domain FCM34_17220 PF00072 Response regulator receiver domain FCM34_17225 PF00561 alpha/beta hydrolase fold FCM34_17230 PF00563 EAL domain FCM34_17230 PF01590 GAF domain FCM34_17230 PF00990 Diguanylate cyclase, GGDEF domain FCM34_17230 PF00360 Phytochrome region FCM34_17235 PF06794 Uncharacterised protein family (UPF0270) FCM34_17240 PF00485 Phosphoribulokinase / Uridine kinase family FCM34_17255 PF02566 OsmC-like protein FCM34_17260 PF13545 Crp-like helix-turn-helix domain FCM34_17260 PF00027 Cyclic nucleotide-binding domain FCM34_17265 PF13847 Methyltransferase domain FCM34_17270 PF08329 Chitinase A, N-terminal domain FCM34_17270 PF00704 Glycosyl hydrolases family 18 FCM34_17275 PF00512 His Kinase A (phospho-acceptor) domain FCM34_17275 PF00989 PAS fold FCM34_17275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_17280 PF12832 MFS_1 like family FCM34_17285 PF07715 TonB-dependent Receptor Plug Domain FCM34_17285 PF00593 TonB dependent receptor FCM34_17305 PF01243 Pyridoxamine 5'-phosphate oxidase FCM34_17310 PF06228 Haem utilisation ChuX/HutX FCM34_17320 PF01032 FecCD transport family FCM34_17325 PF00005 ABC transporter FCM34_17335 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FCM34_17335 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FCM34_17335 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FCM34_17340 PF01370 NAD dependent epimerase/dehydratase family FCM34_17345 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FCM34_17355 PF00535 Glycosyl transferase family 2 FCM34_17360 PF01464 Transglycosylase SLT domain FCM34_17365 PF12848 ABC transporter FCM34_17365 PF00005 ABC transporter FCM34_17375 PF00860 Permease family FCM34_17380 PF13006 Insertion element 4 transposase N-terminal FCM34_17380 PF01609 Transposase DDE domain FCM34_17385 PF00226 DnaJ domain FCM34_17385 PF05099 Tellurite resistance protein TerB FCM34_17390 PF00483 Nucleotidyl transferase FCM34_17395 PF01636 Phosphotransferase enzyme family FCM34_17400 PF03968 OstA-like protein FCM34_17400 PF04453 LPS transport system D FCM34_17405 PF00639 PPIC-type PPIASE domain FCM34_17405 PF09312 SurA N-terminal domain FCM34_17410 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FCM34_17415 PF00398 Ribosomal RNA adenine dimethylase FCM34_17420 PF04379 ApaG domain FCM34_17425 PF00149 Calcineurin-like phosphoesterase FCM34_17435 PF00296 Luciferase-like monooxygenase FCM34_17450 PF01018 GTP1/OBG FCM34_17450 PF01926 50S ribosome-binding GTPase FCM34_17455 PF01016 Ribosomal L27 protein FCM34_17460 PF00829 Ribosomal prokaryotic L21 protein FCM34_17465 PF00348 Polyprenyl synthetase FCM34_17470 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) FCM34_17475 PF01145 SPFH domain / Band 7 family FCM34_17480 PF12221 Bacterial membrane protein N terminal FCM34_17480 PF01145 SPFH domain / Band 7 family FCM34_17485 PF01926 50S ribosome-binding GTPase FCM34_17485 PF13167 GTP-binding GTPase N-terminal FCM34_17485 PF16360 GTP-binding GTPase Middle Region FCM34_17490 PF17209 Hfq protein FCM34_17500 PF08676 MutL C terminal dimerisation domain FCM34_17500 PF01119 DNA mismatch repair protein, C-terminal domain FCM34_17505 PF01520 N-acetylmuramoyl-L-alanine amidase FCM34_17510 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FCM34_17515 PF03853 YjeF-related protein N-terminus FCM34_17515 PF01256 Carbohydrate kinase FCM34_17520 PF08331 Domain of unknown function (DUF1730) FCM34_17525 PF00480 ROK family FCM34_17535 PF00005 ABC transporter FCM34_17535 PF09383 NIL domain FCM34_17540 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_17545 PF03180 NLPA lipoprotein FCM34_17550 PF02357 Transcription termination factor nusG FCM34_17555 PF08447 PAS fold FCM34_17555 PF13426 PAS domain FCM34_17555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_17560 PF00563 EAL domain FCM34_17560 PF00990 Diguanylate cyclase, GGDEF domain FCM34_17560 PF03707 Bacterial signalling protein N terminal repeat FCM34_17565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_17565 PF09456 RcsC Alpha-Beta-Loop (ABL) FCM34_17565 PF00512 His Kinase A (phospho-acceptor) domain FCM34_17565 PF00072 Response regulator receiver domain FCM34_17575 PF01966 HD domain FCM34_17580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_17580 PF00512 His Kinase A (phospho-acceptor) domain FCM34_17580 PF00989 PAS fold FCM34_17580 PF01627 Hpt domain FCM34_17580 PF00072 Response regulator receiver domain FCM34_17580 PF18415 Histidine kinase receptor ArcB trans-membrane domain FCM34_17600 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FCM34_17605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_17605 PF03466 LysR substrate binding domain FCM34_17615 PF01259 SAICAR synthetase FCM34_17620 PF06804 NlpB/DapX lipoprotein FCM34_17625 PF00701 Dihydrodipicolinate synthetase family FCM34_17630 PF01842 ACT domain FCM34_17635 PF00578 AhpC/TSA family FCM34_17640 PF03887 YfbU domain FCM34_17645 PF04217 Protein of unknown function, DUF412 FCM34_17650 PF00871 Acetokinase family FCM34_17655 PF01515 Phosphate acetyl/butaryl transferase FCM34_17655 PF07085 DRTGG domain FCM34_17660 PF10369 Small subunit of acetolactate synthase FCM34_17665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FCM34_17665 PF00205 Thiamine pyrophosphate enzyme, central domain FCM34_17665 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FCM34_17680 PF01569 PAP2 superfamily FCM34_17690 PF00682 HMGL-like FCM34_17690 PF08502 LeuA allosteric (dimerisation) domain FCM34_17695 PF00180 Isocitrate/isopropylmalate dehydrogenase FCM34_17700 PF00330 Aconitase family (aconitate hydratase) FCM34_17705 PF00694 Aconitase C-terminal domain FCM34_17725 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_17730 PF00005 ABC transporter FCM34_17735 PF02562 PhoH-like protein FCM34_17735 PF13638 PIN domain FCM34_17745 PF00317 Ribonucleotide reductase, all-alpha domain FCM34_17745 PF08343 Ribonucleotide reductase N-terminal FCM34_17745 PF02867 Ribonucleotide reductase, barrel domain FCM34_17775 PF03060 Nitronate monooxygenase FCM34_17780 PF00445 Ribonuclease T2 family FCM34_17800 PF16527 Two-component sensor protein CpxA, periplasmic domain FCM34_17800 PF00672 HAMP domain FCM34_17800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_17800 PF00512 His Kinase A (phospho-acceptor) domain FCM34_17805 PF00486 Transcriptional regulatory protein, C terminal FCM34_17805 PF00072 Response regulator receiver domain FCM34_17810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FCM34_17815 PF12704 MacB-like periplasmic core domain FCM34_17815 PF02687 FtsX-like permease family FCM34_17815 PF00005 ABC transporter FCM34_17825 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase FCM34_17845 PF03783 Curli production assembly/transport component CsgG FCM34_17855 PF05643 Putative bacterial lipoprotein (DUF799) FCM34_17860 PF00990 Diguanylate cyclase, GGDEF domain FCM34_17865 PF00271 Helicase conserved C-terminal domain FCM34_17865 PF00270 DEAD/DEAH box helicase FCM34_17870 PF00175 Oxidoreductase NAD-binding domain FCM34_17870 PF00111 2Fe-2S iron-sulfur cluster binding domain FCM34_17870 PF00970 Oxidoreductase FAD-binding domain FCM34_17875 PF02311 AraC-like ligand binding domain FCM34_17875 PF12833 Helix-turn-helix domain FCM34_17910 PF01425 Amidase FCM34_17915 PF04371 Porphyromonas-type peptidyl-arginine deiminase FCM34_17920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_17920 PF03466 LysR substrate binding domain FCM34_17930 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FCM34_17935 PF00583 Acetyltransferase (GNAT) family FCM34_17940 PF01758 Sodium Bile acid symporter family FCM34_17950 PF16658 Class II release factor RF3, C-terminal domain FCM34_17950 PF03144 Elongation factor Tu domain 2 FCM34_17950 PF00009 Elongation factor Tu GTP binding domain FCM34_17955 PF00990 Diguanylate cyclase, GGDEF domain FCM34_17955 PF00072 Response regulator receiver domain FCM34_17960 PF00563 EAL domain FCM34_17960 PF00990 Diguanylate cyclase, GGDEF domain FCM34_17960 PF08448 PAS fold FCM34_17965 PF05762 VWA domain containing CoxE-like protein FCM34_17970 PF12592 Protein of unknown function (DUF3763) FCM34_17970 PF17868 AAA lid domain FCM34_17970 PF07728 AAA domain (dynein-related subfamily) FCM34_17980 PF00583 Acetyltransferase (GNAT) family FCM34_17990 PF00501 AMP-binding enzyme FCM34_18000 PF01177 Asp/Glu/Hydantoin racemase FCM34_18015 PF00392 Bacterial regulatory proteins, gntR family FCM34_18015 PF00155 Aminotransferase class I and II FCM34_18030 PF00209 Sodium:neurotransmitter symporter family FCM34_18035 PF00209 Sodium:neurotransmitter symporter family FCM34_18055 PF07690 Major Facilitator Superfamily FCM34_18065 PF01037 Lrp/AsnC ligand binding domain FCM34_18080 PF01047 MarR family FCM34_18085 PF16884 N-terminal domain of oxidoreductase FCM34_18085 PF00107 Zinc-binding dehydrogenase FCM34_18090 PF00293 NUDIX domain FCM34_18105 PF01641 SelR domain FCM34_18110 PF00128 Alpha amylase, catalytic domain FCM34_18110 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FCM34_18115 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FCM34_18115 PF02806 Alpha amylase, C-terminal all-beta domain FCM34_18115 PF00128 Alpha amylase, catalytic domain FCM34_18120 PF02446 4-alpha-glucanotransferase FCM34_18125 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FCM34_18125 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FCM34_18130 PF01263 Aldose 1-epimerase FCM34_18135 PF02445 Quinolinate synthetase A protein FCM34_18140 PF00672 HAMP domain FCM34_18140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_18215 PF13174 Tetratricopeptide repeat FCM34_18215 PF16331 TolA binding protein trimerisation FCM34_18220 PF00691 OmpA family FCM34_18225 PF07676 WD40-like Beta Propeller Repeat FCM34_18225 PF04052 TolB amino-terminal domain FCM34_18235 PF02472 Biopolymer transport protein ExbD/TolR FCM34_18240 PF01618 MotA/TolQ/ExbB proton channel family FCM34_18245 PF03061 Thioesterase superfamily FCM34_18250 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) FCM34_18255 PF08173 Membrane bound YbgT-like protein FCM34_18260 PF02322 Cytochrome bd terminal oxidase subunit II FCM34_18265 PF01654 Cytochrome bd terminal oxidase subunit I FCM34_18270 PF05491 RuvB C-terminal winged helix domain FCM34_18270 PF05496 Holliday junction DNA helicase RuvB P-loop domain FCM34_18270 PF17864 RuvB AAA lid domain FCM34_18275 PF07499 RuvA, C-terminal domain FCM34_18275 PF01330 RuvA N terminal domain FCM34_18280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_18280 PF00672 HAMP domain FCM34_18285 PF03129 Anticodon binding domain FCM34_18285 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FCM34_18285 PF04073 Aminoacyl-tRNA editing domain FCM34_18290 PF00929 Exonuclease FCM34_18295 PF00106 short chain dehydrogenase FCM34_18310 PF00378 Enoyl-CoA hydratase/isomerase FCM34_18315 PF10952 Protein of unknown function (DUF2753) FCM34_18325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FCM34_18340 PF00270 DEAD/DEAH box helicase FCM34_18340 PF00271 Helicase conserved C-terminal domain FCM34_18345 PF08534 Redoxin FCM34_18350 PF00403 Heavy-metal-associated domain FCM34_18355 PF17967 Pullulanase N2 domain FCM34_18355 PF18494 Pullulanase Ins domain FCM34_18355 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FCM34_18355 PF11852 Domain of unknown function (DUF3372) FCM34_18355 PF03714 Bacterial pullanase-associated domain FCM34_18370 PF02583 Metal-sensitive transcriptional repressor FCM34_18375 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) FCM34_18380 PF01270 Glycosyl hydrolases family 8 FCM34_18385 PF03170 Bacterial cellulose synthase subunit FCM34_18390 PF00535 Glycosyl transferase family 2 FCM34_18390 PF07238 PilZ domain FCM34_18410 PF00155 Aminotransferase class I and II FCM34_18415 PF03466 LysR substrate binding domain FCM34_18415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_18425 PF04055 Radical SAM superfamily FCM34_18430 PF11230 Protein of unknown function (DUF3029) FCM34_18455 PF17200 Single Cache domain 2 FCM34_18455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_18455 PF00672 HAMP domain FCM34_18460 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading FCM34_18460 PF18416 N-acetylglucosamine binding protein domain 2 FCM34_18465 PF03466 LysR substrate binding domain FCM34_18465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_18470 PF12857 TOBE-like domain FCM34_18470 PF00005 ABC transporter FCM34_18475 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_18480 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_18520 PF00271 Helicase conserved C-terminal domain FCM34_18520 PF00176 SNF2 family N-terminal domain FCM34_18520 PF18339 RapA N-terminal Tudor like domain 1 FCM34_18520 PF18337 RapA N-terminal Tudor like domain FCM34_18520 PF12137 RNA polymerase recycling family C-terminal FCM34_18525 PF00849 RNA pseudouridylate synthase FCM34_18540 PF00563 EAL domain FCM34_18540 PF03707 Bacterial signalling protein N terminal repeat FCM34_18540 PF00990 Diguanylate cyclase, GGDEF domain FCM34_18550 PF00118 TCP-1/cpn60 chaperonin family FCM34_18555 PF00166 Chaperonin 10 Kd subunit FCM34_18565 PF04186 FxsA cytoplasmic membrane protein FCM34_18570 PF10415 Fumarase C C-terminus FCM34_18570 PF00206 Lyase FCM34_18575 PF03605 Anaerobic c4-dicarboxylate membrane transporter FCM34_18580 PF04262 Glutamate-cysteine ligase FCM34_18585 PF05193 Peptidase M16 inactive domain FCM34_18585 PF00675 Insulinase (Peptidase family M16) FCM34_18590 PF09335 SNARE associated Golgi protein FCM34_18595 PF14765 Polyketide synthase dehydratase FCM34_18595 PF00698 Acyl transferase domain FCM34_18595 PF08240 Alcohol dehydrogenase GroES-like domain FCM34_18595 PF08990 Erythronolide synthase docking FCM34_18595 PF16197 Ketoacyl-synthetase C-terminal extension FCM34_18595 PF02801 Beta-ketoacyl synthase, C-terminal domain FCM34_18595 PF08659 KR domain FCM34_18595 PF00550 Phosphopantetheine attachment site FCM34_18595 PF00109 Beta-ketoacyl synthase, N-terminal domain FCM34_18605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FCM34_18625 PF00175 Oxidoreductase NAD-binding domain FCM34_18625 PF00970 Oxidoreductase FAD-binding domain FCM34_18630 PF01281 Ribosomal protein L9, N-terminal domain FCM34_18630 PF03948 Ribosomal protein L9, C-terminal domain FCM34_18635 PF01084 Ribosomal protein S18 FCM34_18640 PF01250 Ribosomal protein S6 FCM34_18645 PF01566 Natural resistance-associated macrophage protein FCM34_18650 PF02272 DHHA1 domain FCM34_18650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FCM34_18650 PF01411 tRNA synthetases class II (A) FCM34_18655 PF13673 Acetyltransferase (GNAT) domain FCM34_18665 PF08032 RNA 2'-O ribose methyltransferase substrate binding FCM34_18665 PF00588 SpoU rRNA Methylase family FCM34_18670 PF08461 Ribonuclease R winged-helix domain FCM34_18670 PF00575 S1 RNA binding domain FCM34_18670 PF00773 RNB domain FCM34_18670 PF08206 Ribonuclease B OB domain FCM34_18670 PF17876 Cold shock domain FCM34_18675 PF00990 Diguanylate cyclase, GGDEF domain FCM34_18680 PF02664 S-Ribosylhomocysteinase (LuxS) FCM34_18690 PF00543 Nitrogen regulatory protein P-II FCM34_18695 PF00795 Carbon-nitrogen hydrolase FCM34_18695 PF02540 NAD synthase FCM34_18740 PF14245 Type IV pilin PilA FCM34_18740 PF07963 Prokaryotic N-terminal methylation motif FCM34_18745 PF02401 LytB protein FCM34_18750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FCM34_18755 PF01252 Signal peptidase (SPase) II FCM34_18760 PF00133 tRNA synthetases class I (I, L, M and V) FCM34_18760 PF06827 Zinc finger found in FPG and IleRS FCM34_18760 PF08264 Anticodon-binding domain of tRNA FCM34_18765 PF06574 FAD synthetase FCM34_18765 PF01687 Riboflavin kinase FCM34_18770 PF03023 Lipid II flippase MurJ FCM34_18775 PF01649 Ribosomal protein S20 FCM34_18780 PF01022 Bacterial regulatory protein, arsR family FCM34_18785 PF03466 LysR substrate binding domain FCM34_18785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_18795 PF06965 Na+/H+ antiporter 1 FCM34_18800 PF00303 Thymidylate synthase FCM34_18805 PF01790 Prolipoprotein diacylglyceryl transferase FCM34_18810 PF05524 PEP-utilising enzyme, N-terminal FCM34_18810 PF00391 PEP-utilising enzyme, mobile domain FCM34_18810 PF01590 GAF domain FCM34_18810 PF02896 PEP-utilising enzyme, TIM barrel domain FCM34_18815 PF00293 NUDIX domain FCM34_18820 PF02976 DNA mismatch repair enzyme MutH FCM34_18830 PF01245 Ribosomal protein L19 FCM34_18835 PF01746 tRNA (Guanine-1)-methyltransferase FCM34_18840 PF05239 PRC-barrel domain FCM34_18840 PF01782 RimM N-terminal domain FCM34_18845 PF00886 Ribosomal protein S16 FCM34_18850 PF00448 SRP54-type protein, GTPase domain FCM34_18850 PF02978 Signal peptide binding domain FCM34_18850 PF02881 SRP54-type protein, helical bundle domain FCM34_18855 PF01578 Cytochrome C assembly protein FCM34_18860 PF00571 CBS domain FCM34_18860 PF01595 Cyclin M transmembrane N-terminal domain FCM34_18860 PF03471 Transporter associated domain FCM34_18870 PF02082 Transcriptional regulator FCM34_18875 PF00175 Oxidoreductase NAD-binding domain FCM34_18875 PF00970 Oxidoreductase FAD-binding domain FCM34_18875 PF00042 Globin FCM34_18880 PF08238 Sel1 repeat FCM34_18885 PF00056 lactate/malate dehydrogenase, NAD binding domain FCM34_18885 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FCM34_18890 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_18895 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_18900 PF00497 Bacterial extracellular solute-binding proteins, family 3 FCM34_18905 PF00005 ABC transporter FCM34_18910 PF02863 Arginine repressor, C-terminal domain FCM34_18910 PF01316 Arginine repressor, DNA binding domain FCM34_18915 PF04261 Dyp-type peroxidase family FCM34_18920 PF08402 TOBE domain FCM34_18920 PF00005 ABC transporter FCM34_18935 PF00543 Nitrogen regulatory protein P-II FCM34_18940 PF00472 RF-1 domain FCM34_18945 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FCM34_18945 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FCM34_18950 PF07670 Nucleoside recognition FCM34_18950 PF07662 Na+ dependent nucleoside transporter C-terminus FCM34_18950 PF01773 Na+ dependent nucleoside transporter N-terminus FCM34_18955 PF03466 LysR substrate binding domain FCM34_18955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_18960 PF00255 Glutathione peroxidase FCM34_18970 PF02595 Glycerate kinase family FCM34_18975 PF02447 GntP family permease FCM34_18980 PF13556 PucR C-terminal helix-turn-helix domain FCM34_18980 PF17853 GGDEF-like domain FCM34_18980 PF05651 Putative sugar diacid recognition FCM34_18985 PF06062 Uncharacterised protein family (UPF0231) FCM34_19005 PF02594 Uncharacterised ACR, YggU family COG1872 FCM34_19010 PF02325 YGGT family FCM34_19015 PF03807 NADP oxidoreductase coenzyme F420-dependent FCM34_19015 PF14748 Pyrroline-5-carboxylate reductase dimerisation FCM34_19020 PF01168 Alanine racemase, N-terminal domain FCM34_19025 PF00437 Type II/IV secretion system protein FCM34_19030 PF00437 Type II/IV secretion system protein FCM34_19035 PF03883 Peroxide stress protein YaaA FCM34_19040 PF00271 Helicase conserved C-terminal domain FCM34_19040 PF00270 DEAD/DEAH box helicase FCM34_19045 PF05175 Methyltransferase small domain FCM34_19050 PF05525 Branched-chain amino acid transport protein FCM34_19065 PF01475 Ferric uptake regulator family FCM34_19070 PF01207 Dihydrouridine synthase (Dus) FCM34_19085 PF00216 Bacterial DNA-binding protein FCM34_19090 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ FCM34_19095 PF07238 PilZ domain FCM34_19100 PF18073 Rubredoxin metal binding domain FCM34_19115 PF18429 Domain of unknown function (DUF5609) FCM34_19125 PF05231 MASE1 FCM34_19125 PF08447 PAS fold FCM34_19125 PF08448 PAS fold FCM34_19125 PF00563 EAL domain FCM34_19125 PF00990 Diguanylate cyclase, GGDEF domain FCM34_19125 PF13426 PAS domain FCM34_19130 PF01048 Phosphorylase superfamily FCM34_19135 PF01676 Metalloenzyme superfamily FCM34_19140 PF00591 Glycosyl transferase family, a/b domain FCM34_19140 PF02885 Glycosyl transferase family, helical bundle domain FCM34_19140 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FCM34_19145 PF01791 DeoC/LacD family aldolase FCM34_19155 PF01773 Na+ dependent nucleoside transporter N-terminus FCM34_19155 PF07662 Na+ dependent nucleoside transporter C-terminus FCM34_19155 PF07670 Nucleoside recognition FCM34_19160 PF01026 TatD related DNase FCM34_19175 PF05958 tRNA (Uracil-5-)-methyltransferase FCM34_19175 PF01938 TRAM domain FCM34_19180 PF00909 Ammonium Transporter Family FCM34_19200 PF03739 Lipopolysaccharide export system permease LptF/LptG FCM34_19205 PF03739 Lipopolysaccharide export system permease LptF/LptG FCM34_19210 PF02789 Cytosol aminopeptidase family, N-terminal domain FCM34_19210 PF00883 Cytosol aminopeptidase family, catalytic domain FCM34_19215 PF04364 DNA polymerase III chi subunit, HolC FCM34_19220 PF00133 tRNA synthetases class I (I, L, M and V) FCM34_19220 PF10458 Valyl tRNA synthetase tRNA binding arm FCM34_19220 PF08264 Anticodon-binding domain of tRNA FCM34_19225 PF01595 Cyclin M transmembrane N-terminal domain FCM34_19225 PF03471 Transporter associated domain FCM34_19225 PF00571 CBS domain FCM34_19230 PF09335 SNARE associated Golgi protein FCM34_19235 PF00768 D-alanyl-D-alanine carboxypeptidase FCM34_19270 PF02599 Global regulator protein family FCM34_19275 PF00696 Amino acid kinase family FCM34_19275 PF13840 ACT domain FCM34_19275 PF01842 ACT domain FCM34_19280 PF01411 tRNA synthetases class II (A) FCM34_19280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FCM34_19280 PF02272 DHHA1 domain FCM34_19285 PF02631 RecX family FCM34_19290 PF00154 recA bacterial DNA recombination protein FCM34_19295 PF02464 Competence-damaged protein FCM34_19310 PF09588 YqaJ-like viral recombinase domain FCM34_19355 PF04002 RadC-like JAB domain FCM34_19400 PF00176 SNF2 family N-terminal domain FCM34_19400 PF18337 RapA N-terminal Tudor like domain FCM34_19400 PF18339 RapA N-terminal Tudor like domain 1 FCM34_19400 PF00271 Helicase conserved C-terminal domain FCM34_19400 PF12137 RNA polymerase recycling family C-terminal FCM34_19405 PF00145 C-5 cytosine-specific DNA methylase FCM34_19440 PF00589 Phage integrase family FCM34_19440 PF13356 Arm DNA-binding domain FCM34_19445 PF05190 MutS family domain IV FCM34_19445 PF05188 MutS domain II FCM34_19445 PF01624 MutS domain I FCM34_19445 PF00488 MutS domain V FCM34_19445 PF05192 MutS domain III FCM34_19450 PF02028 BCCT, betaine/carnitine/choline family transporter FCM34_19490 PF02660 Glycerol-3-phosphate acyltransferase FCM34_19495 PF02152 Dihydroneopterin aldolase FCM34_19500 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FCM34_19510 PF07690 Major Facilitator Superfamily FCM34_19520 PF01548 Transposase FCM34_19520 PF02371 Transposase IS116/IS110/IS902 family FCM34_19525 PF07683 Cobalamin synthesis protein cobW C-terminal domain FCM34_19525 PF02492 CobW/HypB/UreG, nucleotide-binding domain FCM34_19530 PF04030 D-arabinono-1,4-lactone oxidase FCM34_19530 PF01565 FAD binding domain FCM34_19535 PF01810 LysE type translocator FCM34_19540 PF03466 LysR substrate binding domain FCM34_19540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_19545 PF12792 CSS motif domain associated with EAL FCM34_19545 PF00563 EAL domain FCM34_19550 PF00330 Aconitase family (aconitate hydratase) FCM34_19550 PF06434 Aconitate hydratase 2 N-terminus FCM34_19550 PF11791 Aconitate B N-terminal domain FCM34_19555 PF01734 Patatin-like phospholipase FCM34_19560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_19560 PF00672 HAMP domain FCM34_19560 PF12729 Four helix bundle sensory module for signal transduction FCM34_19565 PF12729 Four helix bundle sensory module for signal transduction FCM34_19565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FCM34_19565 PF00672 HAMP domain FCM34_19575 PF07992 Pyridine nucleotide-disulphide oxidoreductase FCM34_19575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FCM34_19580 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FCM34_19580 PF00364 Biotin-requiring enzyme FCM34_19580 PF02817 e3 binding domain FCM34_19585 PF17831 Pyruvate dehydrogenase E1 component middle domain FCM34_19585 PF00456 Transketolase, thiamine diphosphate binding domain FCM34_19590 PF00392 Bacterial regulatory proteins, gntR family FCM34_19590 PF07729 FCD domain FCM34_19595 PF01510 N-acetylmuramoyl-L-alanine amidase FCM34_19605 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FCM34_19605 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FCM34_19610 PF05598 Transposase domain (DUF772) FCM34_19610 PF01609 Transposase DDE domain FCM34_19615 PF00114 Pilin (bacterial filament) FCM34_19615 PF07963 Prokaryotic N-terminal methylation motif FCM34_19620 PF00437 Type II/IV secretion system protein FCM34_19620 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FCM34_19625 PF00482 Type II secretion system (T2SS), protein F FCM34_19630 PF01478 Type IV leader peptidase family FCM34_19630 PF06750 Bacterial Peptidase A24 N-terminal domain FCM34_19635 PF01121 Dephospho-CoA kinase FCM34_19640 PF07072 Cell division protein FCM34_19645 PF03884 DNA gyrase inhibitor YacG FCM34_19650 PF00293 NUDIX domain FCM34_19660 PF02810 SEC-C motif FCM34_19660 PF07516 SecA Wing and Scaffold domain FCM34_19660 PF07517 SecA DEAD-like domain FCM34_19660 PF01043 SecA preprotein cross-linking domain FCM34_19670 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FCM34_19675 PF00091 Tubulin/FtsZ family, GTPase domain FCM34_19675 PF12327 FtsZ family, C-terminal domain FCM34_19680 PF02491 SHS2 domain inserted in FTSA FCM34_19685 PF03799 Cell division protein FtsQ FCM34_19685 PF08478 POTRA domain, FtsQ-type FCM34_19690 PF01225 Mur ligase family, catalytic domain FCM34_19690 PF08245 Mur ligase middle domain FCM34_19690 PF02875 Mur ligase family, glutamate ligase domain FCM34_19695 PF04101 Glycosyltransferase family 28 C-terminal domain FCM34_19695 PF03033 Glycosyltransferase family 28 N-terminal domain FCM34_19700 PF01098 Cell cycle protein FCM34_19705 PF08245 Mur ligase middle domain FCM34_19705 PF02875 Mur ligase family, glutamate ligase domain FCM34_19710 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FCM34_19710 PF00953 Glycosyl transferase family 4 FCM34_19715 PF08245 Mur ligase middle domain FCM34_19715 PF02875 Mur ligase family, glutamate ligase domain FCM34_19715 PF01225 Mur ligase family, catalytic domain FCM34_19720 PF01225 Mur ligase family, catalytic domain FCM34_19720 PF02875 Mur ligase family, glutamate ligase domain FCM34_19720 PF08245 Mur ligase middle domain FCM34_19725 PF03717 Penicillin-binding Protein dimerisation domain FCM34_19725 PF00905 Penicillin binding protein transpeptidase domain FCM34_19730 PF04999 Cell division protein FtsL FCM34_19735 PF01795 MraW methylase family FCM34_19740 PF02381 MraZ protein, putative antitoxin-like FCM34_19750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FCM34_19755 PF04348 LppC putative lipoprotein FCM34_19760 PF02021 Uncharacterised protein family UPF0102 FCM34_19765 PF13580 SIS domain FCM34_19770 PF04972 BON domain FCM34_19775 PF04386 Stringent starvation protein B FCM34_19780 PF02798 Glutathione S-transferase, N-terminal domain FCM34_19780 PF00043 Glutathione S-transferase, C-terminal domain FCM34_19785 PF02167 Cytochrome C1 family FCM34_19790 PF00033 Cytochrome b/b6/petB FCM34_19790 PF00032 Cytochrome b(C-terminal)/b6/petD FCM34_19795 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FCM34_19795 PF00355 Rieske [2Fe-2S] domain FCM34_19800 PF00380 Ribosomal protein S9/S16 FCM34_19805 PF00572 Ribosomal protein L13 FCM34_19810 PF03969 AFG1-like ATPase FCM34_19820 PF00595 PDZ domain FCM34_19820 PF13180 PDZ domain FCM34_19825 PF13180 PDZ domain FCM34_19855 PF01979 Amidohydrolase family FCM34_19860 PF03841 L-seryl-tRNA selenium transferase FCM34_19865 PF07071 KDGP aldolase FCM34_19870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FCM34_19870 PF02378 Phosphotransferase system, EIIC FCM34_19870 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FCM34_19875 PF00381 PTS HPr component phosphorylation site FCM34_19880 PF03668 P-loop ATPase protein family FCM34_19885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FCM34_19890 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FCM34_19895 PF04552 Sigma-54, DNA binding domain FCM34_19895 PF04963 Sigma-54 factor, core binding domain FCM34_19895 PF00309 Sigma-54 factor, Activator interacting domain (AID) FCM34_19900 PF00005 ABC transporter FCM34_19900 PF12399 Branched-chain amino acid ATP-binding cassette transporter FCM34_19905 PF03968 OstA-like protein FCM34_19920 PF00571 CBS domain FCM34_19920 PF01380 SIS domain FCM34_19925 PF00005 ABC transporter FCM34_19930 PF02405 Permease MlaE FCM34_19935 PF02470 MlaD protein FCM34_19940 PF05494 MlaC protein FCM34_19950 PF01722 BolA-like protein FCM34_19955 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FCM34_19960 PF03692 Putative zinc- or iron-chelating domain FCM34_19965 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FCM34_19975 PF08241 Methyltransferase domain FCM34_19985 PF00593 TonB dependent receptor FCM34_19985 PF07715 TonB-dependent Receptor Plug Domain FCM34_20000 PF01638 HxlR-like helix-turn-helix FCM34_20005 PF08803 Putative mono-oxygenase ydhR FCM34_20015 PF06055 Exopolysaccharide synthesis, ExoD FCM34_20020 PF00990 Diguanylate cyclase, GGDEF domain FCM34_20025 PF13036 Peptidoglycan-synthase activator LpoB FCM34_20055 PF00005 ABC transporter FCM34_20060 PF04055 Radical SAM superfamily FCM34_20060 PF06968 Biotin and Thiamin Synthesis associated domain FCM34_20065 PF05690 Thiazole biosynthesis protein ThiG FCM34_20075 PF00899 ThiF family FCM34_20080 PF02581 Thiamine monophosphate synthase FCM34_20085 PF13667 ThiC-associated domain FCM34_20085 PF01964 Radical SAM ThiC family FCM34_20100 PF00486 Transcriptional regulatory protein, C terminal FCM34_20100 PF00072 Response regulator receiver domain FCM34_20110 PF08443 RimK-like ATP-grasp domain FCM34_20110 PF18030 RimK PreATP-grasp domain FCM34_20120 PF02574 Homocysteine S-methyltransferase FCM34_20120 PF00809 Pterin binding enzyme FCM34_20120 PF02965 Vitamin B12 dependent methionine synthase, activation domain FCM34_20120 PF02310 B12 binding domain FCM34_20120 PF02607 B12 binding domain FCM34_20125 PF00999 Sodium/hydrogen exchanger family FCM34_20145 PF04228 Putative neutral zinc metallopeptidase FCM34_20155 PF07690 Major Facilitator Superfamily FCM34_20160 PF01914 MarC family integral membrane protein FCM34_20170 PF01523 Putative modulator of DNA gyrase FCM34_20175 PF00795 Carbon-nitrogen hydrolase FCM34_20180 PF13502 AsmA-like C-terminal region FCM34_20180 PF13116 Protein of unknown function FCM34_20185 PF00575 S1 RNA binding domain FCM34_20185 PF10150 Ribonuclease E/G family FCM34_20190 PF02545 Maf-like protein FCM34_20195 PF04093 rod shape-determining protein MreD FCM34_20200 PF04085 rod shape-determining protein MreC FCM34_20230 PF00114 Pilin (bacterial filament) FCM34_20230 PF07963 Prokaryotic N-terminal methylation motif FCM34_20235 PF07963 Prokaryotic N-terminal methylation motif FCM34_20235 PF00114 Pilin (bacterial filament) FCM34_20250 PF00482 Type II secretion system (T2SS), protein F FCM34_20255 PF00437 Type II/IV secretion system protein FCM34_20275 PF00263 Bacterial type II and III secretion system protein FCM34_20275 PF03958 Bacterial type II/III secretion system short domain FCM34_20310 PF12792 CSS motif domain associated with EAL FCM34_20310 PF00563 EAL domain FCM34_20315 PF01699 Sodium/calcium exchanger protein FCM34_20320 PF00221 Aromatic amino acid lyase FCM34_20325 PF17392 Urocanase C-terminal domain FCM34_20325 PF17391 Urocanase N-terminal domain FCM34_20325 PF01175 Urocanase Rossmann-like domain FCM34_20330 PF00491 Arginase family FCM34_20335 PF01979 Amidohydrolase family FCM34_20340 PF00392 Bacterial regulatory proteins, gntR family FCM34_20340 PF07702 UTRA domain FCM34_20345 PF00484 Carbonic anhydrase FCM34_20350 PF04545 Sigma-70, region 4 FCM34_20350 PF00140 Sigma-70 factor, region 1.2 FCM34_20350 PF04542 Sigma-70 region 2 FCM34_20355 PF18075 FtsX extracellular domain FCM34_20360 PF00005 ABC transporter FCM34_20365 PF00448 SRP54-type protein, GTPase domain FCM34_20365 PF02881 SRP54-type protein, helical bundle domain FCM34_20380 PF07226 Protein of unknown function (DUF1422) FCM34_20385 PF00440 Bacterial regulatory proteins, tetR family FCM34_20395 PF13091 PLD-like domain FCM34_20400 PF00497 Bacterial extracellular solute-binding proteins, family 3 FCM34_20400 PF01464 Transglycosylase SLT domain FCM34_20410 PF02416 mttA/Hcf106 family FCM34_20415 PF03466 LysR substrate binding domain FCM34_20415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_20420 PF01914 MarC family integral membrane protein FCM34_20425 PF10678 Protein of unknown function (DUF2492) FCM34_20430 PF00375 Sodium:dicarboxylate symporter family FCM34_20440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_20440 PF03466 LysR substrate binding domain FCM34_20445 PF13533 Biotin-lipoyl like FCM34_20450 PF07690 Major Facilitator Superfamily FCM34_20455 PF07947 YhhN family FCM34_20475 PF00326 Prolyl oligopeptidase family FCM34_20475 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FCM34_20490 PF00106 short chain dehydrogenase FCM34_20495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_20495 PF03466 LysR substrate binding domain FCM34_20500 PF02525 Flavodoxin-like fold FCM34_20505 PF02254 TrkA-N domain FCM34_20505 PF00999 Sodium/hydrogen exchanger family FCM34_20550 PF13737 Transposase DDE domain FCM34_20555 PF02796 Helix-turn-helix domain of resolvase FCM34_20555 PF00665 Integrase core domain FCM34_20565 PF01695 IstB-like ATP binding protein FCM34_20570 PF01695 IstB-like ATP binding protein FCM34_20580 PF01196 Ribosomal protein L17 FCM34_20585 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FCM34_20585 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FCM34_20585 PF01000 RNA polymerase Rpb3/RpoA insert domain FCM34_20590 PF00163 Ribosomal protein S4/S9 N-terminal domain FCM34_20590 PF01479 S4 domain FCM34_20595 PF00411 Ribosomal protein S11 FCM34_20600 PF00416 Ribosomal protein S13/S18 FCM34_20605 PF00444 Ribosomal protein L36 FCM34_20610 PF00344 SecY translocase FCM34_20615 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FCM34_20620 PF00327 Ribosomal protein L30p/L7e FCM34_20625 PF00333 Ribosomal protein S5, N-terminal domain FCM34_20625 PF03719 Ribosomal protein S5, C-terminal domain FCM34_20630 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FCM34_20635 PF00347 Ribosomal protein L6 FCM34_20640 PF00410 Ribosomal protein S8 FCM34_20645 PF00253 Ribosomal protein S14p/S29e FCM34_20650 PF00673 ribosomal L5P family C-terminus FCM34_20650 PF00281 Ribosomal protein L5 FCM34_20655 PF00467 KOW motif FCM34_20655 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FCM34_20660 PF00238 Ribosomal protein L14p/L23e FCM34_20665 PF00366 Ribosomal protein S17 FCM34_20670 PF00831 Ribosomal L29 protein FCM34_20675 PF00252 Ribosomal protein L16p/L10e FCM34_20680 PF00189 Ribosomal protein S3, C-terminal domain FCM34_20680 PF07650 KH domain FCM34_20685 PF00237 Ribosomal protein L22p/L17e FCM34_20690 PF00203 Ribosomal protein S19 FCM34_20695 PF03947 Ribosomal Proteins L2, C-terminal domain FCM34_20695 PF00181 Ribosomal Proteins L2, RNA binding domain FCM34_20700 PF00276 Ribosomal protein L23 FCM34_20705 PF00573 Ribosomal protein L4/L1 family FCM34_20710 PF00297 Ribosomal protein L3 FCM34_20715 PF00338 Ribosomal protein S10p/S20e FCM34_20725 PF00512 His Kinase A (phospho-acceptor) domain FCM34_20725 PF00672 HAMP domain FCM34_20725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_20730 PF00486 Transcriptional regulatory protein, C terminal FCM34_20730 PF00072 Response regulator receiver domain FCM34_20735 PF01272 Transcription elongation factor, GreA/GreB, C-term FCM34_20735 PF03449 Transcription elongation factor, N-terminal FCM34_20740 PF16921 Tex protein YqgF-like domain FCM34_20740 PF09371 Tex-like protein N-terminal domain FCM34_20740 PF00575 S1 RNA binding domain FCM34_20740 PF17674 HHH domain FCM34_20755 PF00561 alpha/beta hydrolase fold FCM34_20760 PF00156 Phosphoribosyl transferase domain FCM34_20765 PF01106 NifU-like domain FCM34_20765 PF01521 Iron-sulphur cluster biosynthesis FCM34_20770 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FCM34_20770 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FCM34_20775 PF02556 Preprotein translocase subunit SecB FCM34_20780 PF00581 Rhodanese-like domain FCM34_20785 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FCM34_20785 PF01676 Metalloenzyme superfamily FCM34_20790 PF01551 Peptidase family M23 FCM34_20800 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FCM34_20800 PF00356 Bacterial regulatory proteins, lacI family FCM34_20815 PF01081 KDPG and KHG aldolase FCM34_20820 PF00920 Dehydratase family FCM34_20825 PF01202 Shikimate kinase FCM34_20830 PF02447 GntP family permease FCM34_20835 PF13091 PLD-like domain FCM34_20840 PF00271 Helicase conserved C-terminal domain FCM34_20840 PF00270 DEAD/DEAH box helicase FCM34_20840 PF17191 RecG wedge domain FCM34_20850 PF09500 Putative thioesterase (yiiD_Cterm) FCM34_20850 PF00583 Acetyltransferase (GNAT) family FCM34_20860 PF02580 D-Tyr-tRNA(Tyr) deacylase FCM34_20865 PF03631 Virulence factor BrkB FCM34_20875 PF03951 Glutamine synthetase, beta-Grasp domain FCM34_20875 PF00120 Glutamine synthetase, catalytic domain FCM34_20885 PF00989 PAS fold FCM34_20885 PF00512 His Kinase A (phospho-acceptor) domain FCM34_20885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_20890 PF00072 Response regulator receiver domain FCM34_20890 PF00158 Sigma-54 interaction domain FCM34_20890 PF02954 Bacterial regulatory protein, Fis family FCM34_20895 PF00962 Adenosine/AMP deaminase FCM34_20900 PF04055 Radical SAM superfamily FCM34_20900 PF06969 HemN C-terminal domain FCM34_20905 PF10675 Protein of unknown function (DUF2489) FCM34_20910 PF04220 Der GTPase activator (YihI) FCM34_20915 PF00034 Cytochrome c FCM34_20920 PF01926 50S ribosome-binding GTPase FCM34_20925 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FCM34_20925 PF01488 Shikimate / quinate 5-dehydrogenase FCM34_20925 PF08501 Shikimate dehydrogenase substrate binding domain FCM34_20930 PF01218 Coproporphyrinogen III oxidase FCM34_20935 PF01300 Telomere recombination FCM34_20940 PF01396 Topoisomerase DNA binding C4 zinc finger FCM34_20945 PF04361 Protein of unknown function (DUF494) FCM34_20950 PF17782 DprA winged helix domain FCM34_20950 PF02481 DNA recombination-mediator protein A FCM34_20960 PF01327 Polypeptide deformylase FCM34_20965 PF02911 Formyl transferase, C-terminal domain FCM34_20965 PF00551 Formyl transferase FCM34_20970 PF01189 16S rRNA methyltransferase RsmB/F FCM34_20970 PF01029 NusB family FCM34_20975 PF02254 TrkA-N domain FCM34_20975 PF02080 TrkA-C domain FCM34_20980 PF02386 Cation transport protein FCM34_20985 PF02646 RmuC family FCM34_21000 PF02082 Transcriptional regulator FCM34_21005 PF00294 pfkB family carbohydrate kinase FCM34_21010 PF03466 LysR substrate binding domain FCM34_21010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_21015 PF00117 Glutamine amidotransferase class-I FCM34_21015 PF02540 NAD synthase FCM34_21015 PF00958 GMP synthase C terminal domain FCM34_21020 PF00171 Aldehyde dehydrogenase family FCM34_21025 PF00202 Aminotransferase class-III FCM34_21030 PF07883 Cupin domain FCM34_21030 PF01381 Helix-turn-helix FCM34_21035 PF00171 Aldehyde dehydrogenase family FCM34_21040 PF00892 EamA-like transporter family FCM34_21045 PF12833 Helix-turn-helix domain FCM34_21050 PF01810 LysE type translocator FCM34_21055 PF06206 CpeT/CpcT family (DUF1001) FCM34_21075 PF14001 YdfZ protein FCM34_21090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_21090 PF03466 LysR substrate binding domain FCM34_21105 PF05598 Transposase domain (DUF772) FCM34_21105 PF01609 Transposase DDE domain FCM34_21110 PF04607 Region found in RelA / SpoT proteins FCM34_21120 PF13361 UvrD-like helicase C-terminal domain FCM34_21120 PF00580 UvrD/REP helicase N-terminal domain FCM34_21155 PF03466 LysR substrate binding domain FCM34_21155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FCM34_21160 PF08240 Alcohol dehydrogenase GroES-like domain FCM34_21160 PF00107 Zinc-binding dehydrogenase FCM34_21165 PF00756 Putative esterase FCM34_21180 PF03781 Sulfatase-modifying factor enzyme 1 FCM34_21180 PF12867 DinB superfamily FCM34_21185 PF13593 SBF-like CPA transporter family (DUF4137) FCM34_21190 PF13520 Amino acid permease FCM34_21200 PF13520 Amino acid permease FCM34_21205 PF04074 YhcH/YjgK/YiaL FCM34_21210 PF02929 Beta galactosidase small chain FCM34_21210 PF16353 Domain of unknown function(DUF4981) FCM34_21210 PF00703 Glycosyl hydrolases family 2 FCM34_21210 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FCM34_21210 PF02837 Glycosyl hydrolases family 2, sugar binding domain FCM34_21215 PF00356 Bacterial regulatory proteins, lacI family FCM34_21250 PF12724 Flavodoxin domain FCM34_21255 PF02386 Cation transport protein FCM34_21260 PF09186 Domain of unknown function (DUF1949) FCM34_21260 PF01205 Uncharacterized protein family UPF0029 FCM34_21265 PF00557 Metallopeptidase family M24 FCM34_21270 PF13193 AMP-binding enzyme C-terminal domain FCM34_21270 PF00501 AMP-binding enzyme FCM34_21275 PF00378 Enoyl-CoA hydratase/isomerase FCM34_21275 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FCM34_21275 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FCM34_21280 PF00108 Thiolase, N-terminal domain FCM34_21280 PF02803 Thiolase, C-terminal domain FCM34_21285 PF00486 Transcriptional regulatory protein, C terminal FCM34_21285 PF00072 Response regulator receiver domain FCM34_21290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_21290 PF00512 His Kinase A (phospho-acceptor) domain FCM34_21290 PF00672 HAMP domain FCM34_21295 PF01547 Bacterial extracellular solute-binding protein FCM34_21305 PF01206 Sulfurtransferase TusA FCM34_21310 PF01042 Endoribonuclease L-PSP FCM34_21315 PF13488 Glycine zipper FCM34_21315 PF00691 OmpA family FCM34_21340 PF03352 Methyladenine glycosylase FCM34_21345 PF02091 Glycyl-tRNA synthetase alpha subunit FCM34_21350 PF05746 DALR anticodon binding domain FCM34_21350 PF02092 Glycyl-tRNA synthetase beta subunit FCM34_21355 PF05598 Transposase domain (DUF772) FCM34_21355 PF01609 Transposase DDE domain FCM34_21360 PF05598 Transposase domain (DUF772) FCM34_21360 PF01609 Transposase DDE domain FCM34_21365 PF00990 Diguanylate cyclase, GGDEF domain FCM34_21365 PF00360 Phytochrome region FCM34_21365 PF00563 EAL domain FCM34_21365 PF01590 GAF domain FCM34_21380 PF03222 Tryptophan/tyrosine permease family FCM34_21385 PF03222 Tryptophan/tyrosine permease family FCM34_21390 PF01212 Beta-eliminating lyase FCM34_21400 PF12801 4Fe-4S binding domain FCM34_21410 PF07992 Pyridine nucleotide-disulphide oxidoreductase FCM34_21410 PF18113 Rubredoxin binding C-terminal domain FCM34_21415 PF00301 Rubredoxin FCM34_21415 PF00753 Metallo-beta-lactamase superfamily FCM34_21415 PF00258 Flavodoxin FCM34_21420 PF01590 GAF domain FCM34_21420 PF00158 Sigma-54 interaction domain FCM34_21425 PF00356 Bacterial regulatory proteins, lacI family FCM34_21430 PF13458 Periplasmic binding protein FCM34_21435 PF02653 Branched-chain amino acid transport system / permease component FCM34_21440 PF02653 Branched-chain amino acid transport system / permease component FCM34_21440 PF11862 Domain of unknown function (DUF3382) FCM34_21445 PF00005 ABC transporter FCM34_21445 PF12399 Branched-chain amino acid ATP-binding cassette transporter FCM34_21450 PF00005 ABC transporter FCM34_21460 PF01810 LysE type translocator FCM34_21465 PF00581 Rhodanese-like domain FCM34_21470 PF01694 Rhomboid family FCM34_21470 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FCM34_21475 PF12262 Bacterial virulence factor lipase N-terminal FCM34_21480 PF04380 Membrane fusogenic activity FCM34_21485 PF00175 Oxidoreductase NAD-binding domain FCM34_21490 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FCM34_21500 PF07497 Rho termination factor, RNA-binding domain FCM34_21500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FCM34_21500 PF07498 Rho termination factor, N-terminal domain FCM34_21505 PF00085 Thioredoxin FCM34_21510 PF00271 Helicase conserved C-terminal domain FCM34_21510 PF00270 DEAD/DEAH box helicase FCM34_21515 PF02541 Ppx/GppA phosphatase family FCM34_21525 PF04445 Putative SAM-dependent methyltransferase FCM34_21530 PF00990 Diguanylate cyclase, GGDEF domain FCM34_21530 PF00563 EAL domain FCM34_21530 PF03707 Bacterial signalling protein N terminal repeat FCM34_21535 PF01432 Peptidase family M3 FCM34_21540 PF00490 Delta-aminolevulinic acid dehydratase FCM34_21545 PF01026 TatD related DNase FCM34_21550 PF00902 Sec-independent protein translocase protein (TatC) FCM34_21555 PF02416 mttA/Hcf106 family FCM34_21560 PF02416 mttA/Hcf106 family FCM34_21565 PF03109 ABC1 family FCM34_21570 PF02036 SCP-2 sterol transfer family FCM34_21575 PF01209 ubiE/COQ5 methyltransferase family FCM34_21580 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FCM34_21585 PF07969 Amidohydrolase family FCM34_21615 PF00132 Bacterial transferase hexapeptide (six repeats) FCM34_21620 PF00476 DNA polymerase family A FCM34_21620 PF01612 3'-5' exonuclease FCM34_21620 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FCM34_21620 PF01367 5'-3' exonuclease, C-terminal SAM fold FCM34_21630 PF06005 Cell division protein ZapB FCM34_21640 PF00132 Bacterial transferase hexapeptide (six repeats) FCM34_21640 PF06426 Serine acetyltransferase, N-terminal FCM34_21645 PF16916 Dimerisation domain of Zinc Transporter FCM34_21645 PF01545 Cation efflux family FCM34_21650 PF00486 Transcriptional regulatory protein, C terminal FCM34_21650 PF00072 Response regulator receiver domain FCM34_21655 PF00512 His Kinase A (phospho-acceptor) domain FCM34_21655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_21655 PF00672 HAMP domain FCM34_21655 PF16527 Two-component sensor protein CpxA, periplasmic domain FCM34_21660 PF00588 SpoU rRNA Methylase family FCM34_21665 PF01554 MatE FCM34_21670 PF02630 SCO1/SenC FCM34_21680 PF01726 LexA DNA binding domain FCM34_21680 PF00717 Peptidase S24-like FCM34_21685 PF01553 Acyltransferase FCM34_21690 PF01040 UbiA prenyltransferase family FCM34_21695 PF04345 Chorismate lyase FCM34_21700 PF03748 Flagellar basal body-associated protein FliL FCM34_21720 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FCM34_21720 PF00356 Bacterial regulatory proteins, lacI family FCM34_21725 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FCM34_21735 PF03611 PTS system sugar-specific permease component FCM34_21750 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) FCM34_21765 PF01370 NAD dependent epimerase/dehydratase family FCM34_21770 PF08360 QacR-like protein, C-terminal region FCM34_21770 PF00440 Bacterial regulatory proteins, tetR family FCM34_21775 PF00155 Aminotransferase class I and II FCM34_21780 PF08240 Alcohol dehydrogenase GroES-like domain FCM34_21780 PF00107 Zinc-binding dehydrogenase FCM34_21785 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FCM34_21790 PF03707 Bacterial signalling protein N terminal repeat FCM34_21790 PF00990 Diguanylate cyclase, GGDEF domain FCM34_21790 PF00563 EAL domain FCM34_21795 PF13361 UvrD-like helicase C-terminal domain FCM34_21795 PF00580 UvrD/REP helicase N-terminal domain FCM34_21800 PF00266 Aminotransferase class-V FCM34_21805 PF02657 Fe-S metabolism associated domain FCM34_21810 PF00899 ThiF family FCM34_21845 PF03544 Gram-negative bacterial TonB protein C-terminal FCM34_21850 PF02472 Biopolymer transport protein ExbD/TolR FCM34_21855 PF01618 MotA/TolQ/ExbB proton channel family FCM34_21860 PF01618 MotA/TolQ/ExbB proton channel family FCM34_21870 PF03472 Autoinducer binding domain FCM34_21870 PF00196 Bacterial regulatory proteins, luxR family FCM34_21875 PF01380 SIS domain FCM34_21880 PF08220 DeoR-like helix-turn-helix domain FCM34_21880 PF00455 DeoR C terminal sensor domain FCM34_21885 PF00072 Response regulator receiver domain FCM34_21885 PF00486 Transcriptional regulatory protein, C terminal FCM34_21890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FCM34_21890 PF00672 HAMP domain FCM34_21890 PF00512 His Kinase A (phospho-acceptor) domain FCM34_21895 PF00905 Penicillin binding protein transpeptidase domain FCM34_21900 PF06123 Inner membrane protein CreD FCM34_21905 PF12804 MobA-like NTP transferase domain FCM34_21905 PF00132 Bacterial transferase hexapeptide (six repeats) FCM34_21905 PF14602 Hexapeptide repeat of succinyl-transferase FCM34_21910 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FCM34_21910 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FCM34_21915 PF02874 ATP synthase alpha/beta family, beta-barrel domain FCM34_21915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FCM34_21920 PF00231 ATP synthase FCM34_21925 PF00306 ATP synthase alpha/beta chain, C terminal domain FCM34_21925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FCM34_21925 PF02874 ATP synthase alpha/beta family, beta-barrel domain FCM34_21930 PF00213 ATP synthase delta (OSCP) subunit FCM34_21935 PF00430 ATP synthase B/B' CF(0) FCM34_21940 PF00137 ATP synthase subunit C FCM34_21945 PF00119 ATP synthase A chain FCM34_21955 PF17762 HTH domain found in ParB protein FCM34_21955 PF02195 ParB-like nuclease domain FCM34_21960 PF13614 AAA domain FCM34_21965 PF02527 rRNA small subunit methyltransferase G FCM34_21970 PF01134 Glucose inhibited division protein A FCM34_21970 PF13932 GidA associated domain FCM34_21975 PF00258 Flavodoxin FCM34_21980 PF00593 TonB dependent receptor FCM34_21980 PF07715 TonB-dependent Receptor Plug Domain FCM34_21985 PF00005 ABC transporter FCM34_21990 PF00005 ABC transporter FCM34_21995 PF01497 Periplasmic binding protein FCM34_22000 PF01032 FecCD transport family FCM34_22005 PF10396 GTP-binding protein TrmE N-terminus FCM34_22005 PF01926 50S ribosome-binding GTPase FCM34_22005 PF12631 MnmE helical domain FCM34_22010 PF02096 60Kd inner membrane protein FCM34_22010 PF14849 YidC periplasmic domain FCM34_22015 PF01809 Putative membrane protein insertion efficiency factor FCM34_22020 PF00825 Ribonuclease P FCM34_22025 PF00468 Ribosomal protein L34 FCM34_22035 PF00528 Binding-protein-dependent transport system inner membrane component FCM34_22040 PF00497 Bacterial extracellular solute-binding proteins, family 3