locus-tag class description CK627_00015 PF07690 Major Facilitator Superfamily CK627_00025 PF01037 Lrp/AsnC ligand binding domain CK627_00040 PF01047 MarR family CK627_00045 PF00107 Zinc-binding dehydrogenase CK627_00045 PF16884 N-terminal domain of oxidoreductase CK627_00050 PF00293 NUDIX domain CK627_00060 PF01641 SelR domain CK627_00065 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CK627_00065 PF00128 Alpha amylase, catalytic domain CK627_00070 PF00128 Alpha amylase, catalytic domain CK627_00070 PF02806 Alpha amylase, C-terminal all-beta domain CK627_00070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CK627_00075 PF02446 4-alpha-glucanotransferase CK627_00080 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CK627_00080 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CK627_00085 PF01263 Aldose 1-epimerase CK627_00090 PF02445 Quinolinate synthetase A protein CK627_00095 PF00672 HAMP domain CK627_00095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_00170 PF16331 TolA binding protein trimerisation CK627_00170 PF13174 Tetratricopeptide repeat CK627_00175 PF00691 OmpA family CK627_00180 PF04052 TolB amino-terminal domain CK627_00180 PF07676 WD40-like Beta Propeller Repeat CK627_00190 PF02472 Biopolymer transport protein ExbD/TolR CK627_00195 PF01618 MotA/TolQ/ExbB proton channel family CK627_00200 PF03061 Thioesterase superfamily CK627_00205 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CK627_00210 PF08173 Membrane bound YbgT-like protein CK627_00215 PF02322 Cytochrome bd terminal oxidase subunit II CK627_00220 PF01654 Cytochrome bd terminal oxidase subunit I CK627_00225 PF05496 Holliday junction DNA helicase RuvB P-loop domain CK627_00225 PF05491 RuvB C-terminal winged helix domain CK627_00225 PF17864 RuvB AAA lid domain CK627_00230 PF01330 RuvA N terminal domain CK627_00230 PF07499 RuvA, C-terminal domain CK627_00235 PF00672 HAMP domain CK627_00235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_00240 PF04073 Aminoacyl-tRNA editing domain CK627_00240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CK627_00240 PF03129 Anticodon binding domain CK627_00245 PF00106 short chain dehydrogenase CK627_00260 PF00378 Enoyl-CoA hydratase/isomerase CK627_00265 PF10952 Protein of unknown function (DUF2753) CK627_00270 PF00132 Bacterial transferase hexapeptide (six repeats) CK627_00280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CK627_00295 PF02594 Uncharacterised ACR, YggU family COG1872 CK627_00300 PF02325 YGGT family CK627_00305 PF03807 NADP oxidoreductase coenzyme F420-dependent CK627_00305 PF14748 Pyrroline-5-carboxylate reductase dimerisation CK627_00310 PF01168 Alanine racemase, N-terminal domain CK627_00315 PF00437 Type II/IV secretion system protein CK627_00320 PF00437 Type II/IV secretion system protein CK627_00325 PF03883 Peroxide stress protein YaaA CK627_00330 PF00270 DEAD/DEAH box helicase CK627_00330 PF00271 Helicase conserved C-terminal domain CK627_00335 PF05175 Methyltransferase small domain CK627_00340 PF05525 Branched-chain amino acid transport protein CK627_00345 PF05525 Branched-chain amino acid transport protein CK627_00360 PF01475 Ferric uptake regulator family CK627_00365 PF01207 Dihydrouridine synthase (Dus) CK627_00380 PF00216 Bacterial DNA-binding protein CK627_00385 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CK627_00390 PF07238 PilZ domain CK627_00395 PF18073 Rubredoxin metal binding domain CK627_00410 PF18429 Domain of unknown function (DUF5609) CK627_00420 PF08448 PAS fold CK627_00420 PF13426 PAS domain CK627_00420 PF00563 EAL domain CK627_00420 PF05231 MASE1 CK627_00420 PF00990 Diguanylate cyclase, GGDEF domain CK627_00420 PF08447 PAS fold CK627_00425 PF01048 Phosphorylase superfamily CK627_00430 PF01676 Metalloenzyme superfamily CK627_00435 PF02885 Glycosyl transferase family, helical bundle domain CK627_00435 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CK627_00435 PF00591 Glycosyl transferase family, a/b domain CK627_00440 PF01791 DeoC/LacD family aldolase CK627_00450 PF07670 Nucleoside recognition CK627_00450 PF07662 Na+ dependent nucleoside transporter C-terminus CK627_00450 PF01773 Na+ dependent nucleoside transporter N-terminus CK627_00455 PF01026 TatD related DNase CK627_00460 PF00114 Pilin (bacterial filament) CK627_00460 PF07963 Prokaryotic N-terminal methylation motif CK627_00470 PF00583 Acetyltransferase (GNAT) family CK627_00475 PF05958 tRNA (Uracil-5-)-methyltransferase CK627_00475 PF01938 TRAM domain CK627_00480 PF00909 Ammonium Transporter Family CK627_00485 PF02899 Phage integrase, N-terminal SAM-like domain CK627_00485 PF00589 Phage integrase family CK627_00495 PF00717 Peptidase S24-like CK627_00495 PF01381 Helix-turn-helix CK627_00505 PF06892 Phage regulatory protein CII (CP76) CK627_00710 PF03739 Lipopolysaccharide export system permease LptF/LptG CK627_00715 PF03739 Lipopolysaccharide export system permease LptF/LptG CK627_00720 PF00883 Cytosol aminopeptidase family, catalytic domain CK627_00720 PF02789 Cytosol aminopeptidase family, N-terminal domain CK627_00725 PF04364 DNA polymerase III chi subunit, HolC CK627_00730 PF10458 Valyl tRNA synthetase tRNA binding arm CK627_00730 PF08264 Anticodon-binding domain of tRNA CK627_00730 PF00133 tRNA synthetases class I (I, L, M and V) CK627_00735 PF00571 CBS domain CK627_00735 PF03471 Transporter associated domain CK627_00735 PF01595 Cyclin M transmembrane N-terminal domain CK627_00740 PF09335 SNARE associated Golgi protein CK627_00745 PF00768 D-alanyl-D-alanine carboxypeptidase CK627_00780 PF02599 Global regulator protein family CK627_00785 PF01842 ACT domain CK627_00785 PF13840 ACT domain CK627_00785 PF00696 Amino acid kinase family CK627_00790 PF02272 DHHA1 domain CK627_00790 PF01411 tRNA synthetases class II (A) CK627_00790 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CK627_00795 PF02631 RecX family CK627_00800 PF00154 recA bacterial DNA recombination protein CK627_00805 PF02464 Competence-damaged protein CK627_00810 PF00488 MutS domain V CK627_00810 PF01624 MutS domain I CK627_00810 PF05188 MutS domain II CK627_00810 PF05192 MutS domain III CK627_00810 PF05190 MutS family domain IV CK627_00815 PF02028 BCCT, betaine/carnitine/choline family transporter CK627_00830 PF04222 Protein of unknown function (DUF416) CK627_00835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CK627_00840 PF01551 Peptidase family M23 CK627_00840 PF08525 Opacity-associated protein A N-terminal motif CK627_00840 PF01476 LysM domain CK627_00860 PF01297 Zinc-uptake complex component A periplasmic CK627_00865 PF00005 ABC transporter CK627_00870 PF00950 ABC 3 transport family CK627_00875 PF03466 LysR substrate binding domain CK627_00875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_00880 PF00892 EamA-like transporter family CK627_00885 PF03167 Uracil DNA glycosylase superfamily CK627_00890 PF00892 EamA-like transporter family CK627_00900 PF01541 GIY-YIG catalytic domain CK627_00915 PF04012 PspA/IM30 family CK627_00920 PF01553 Acyltransferase CK627_00940 PF00578 AhpC/TSA family CK627_00950 PF00226 DnaJ domain CK627_00950 PF01556 DnaJ C terminal domain CK627_00950 PF00684 DnaJ central domain CK627_00990 PF02600 Disulfide bond formation protein DsbB CK627_00995 PF07690 Major Facilitator Superfamily CK627_01000 PF03466 LysR substrate binding domain CK627_01000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_01010 PF00521 DNA gyrase/topoisomerase IV, subunit A CK627_01010 PF03989 DNA gyrase C-terminal domain, beta-propeller CK627_01015 PF00986 DNA gyrase B subunit, carboxyl terminus CK627_01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_01015 PF01751 Toprim domain CK627_01015 PF00204 DNA gyrase B CK627_01020 PF04632 Fusaric acid resistance protein family CK627_01025 PF00529 HlyD membrane-fusion protein of T1SS CK627_01025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CK627_01030 PF07869 Protein of unknown function (DUF1656) CK627_01040 PF00293 NUDIX domain CK627_01045 PF05728 Uncharacterised protein family (UPF0227) CK627_01050 PF00149 Calcineurin-like phosphoesterase CK627_01055 PF06853 Protein of unknown function (DUF1249) CK627_01060 PF00293 NUDIX domain CK627_01065 PF02321 Outer membrane efflux protein CK627_01070 PF01467 Cytidylyltransferase-like CK627_01070 PF00294 pfkB family carbohydrate kinase CK627_01075 PF03279 Bacterial lipid A biosynthesis acyltransferase CK627_01090 PF01865 Protein of unknown function DUF47 CK627_01095 PF01384 Phosphate transporter family CK627_01100 PF04073 Aminoacyl-tRNA editing domain CK627_01120 PF00155 Aminotransferase class I and II CK627_01120 PF00392 Bacterial regulatory proteins, gntR family CK627_01130 PF03466 LysR substrate binding domain CK627_01130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_01135 PF03788 LrgA family CK627_01140 PF04172 LrgB-like family CK627_01155 PF12627 Probable RNA and SrmB- binding site of polymerase A CK627_01155 PF01743 Poly A polymerase head domain CK627_01155 PF01966 HD domain CK627_01160 PF01471 Putative peptidoglycan binding domain CK627_01160 PF13401 AAA domain CK627_01165 PF16537 Type II secretion system protein B CK627_01170 PF00730 HhH-GPD superfamily base excision DNA repair protein CK627_01170 PF10576 Iron-sulfur binding domain of endonuclease III CK627_01170 PF14815 NUDIX domain CK627_01170 PF00633 Helix-hairpin-helix motif CK627_01175 PF04362 Bacterial Fe(2+) trafficking CK627_01180 PF01464 Transglycosylase SLT domain CK627_01180 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CK627_01185 PF04076 Bacterial OB fold (BOF) protein CK627_01190 PF00657 GDSL-like Lipase/Acylhydrolase CK627_01200 PF01389 OmpA-like transmembrane domain CK627_01200 PF00691 OmpA family CK627_01205 PF03886 ABC-type transport auxiliary lipoprotein component CK627_01210 PF02470 MlaD protein CK627_01215 PF04403 Paraquat-inducible protein A CK627_01220 PF17209 Hfq protein CK627_01225 PF13419 Haloacid dehalogenase-like hydrolase CK627_01235 PF00360 Phytochrome region CK627_01235 PF00563 EAL domain CK627_01235 PF00990 Diguanylate cyclase, GGDEF domain CK627_01235 PF01590 GAF domain CK627_01240 PF00701 Dihydrodipicolinate synthetase family CK627_01245 PF05175 Methyltransferase small domain CK627_01245 PF08468 Methyltransferase small domain N-terminal CK627_01250 PF00483 Nucleotidyl transferase CK627_01255 PF00534 Glycosyl transferases group 1 CK627_01255 PF08323 Starch synthase catalytic domain CK627_01295 PF03553 Na+/H+ antiporter family CK627_01300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_01300 PF03466 LysR substrate binding domain CK627_01305 PF13416 Bacterial extracellular solute-binding protein CK627_01310 PF00005 ABC transporter CK627_01310 PF08402 TOBE domain CK627_01315 PF00528 Binding-protein-dependent transport system inner membrane component CK627_01320 PF00528 Binding-protein-dependent transport system inner membrane component CK627_01325 PF00171 Aldehyde dehydrogenase family CK627_01350 PF14602 Hexapeptide repeat of succinyl-transferase CK627_01350 PF12464 Maltose acetyltransferase CK627_01355 PF11941 Domain of unknown function (DUF3459) CK627_01355 PF00128 Alpha amylase, catalytic domain CK627_01360 PF00367 phosphotransferase system, EIIB CK627_01360 PF02378 Phosphotransferase system, EIIC CK627_01365 PF00356 Bacterial regulatory proteins, lacI family CK627_01380 PF00710 Asparaginase, N-terminal CK627_01380 PF17763 Glutaminase/Asparaginase C-terminal domain CK627_01395 PF02142 MGS-like domain CK627_01405 PF00210 Ferritin-like domain CK627_01420 PF08351 Domain of unknown function (DUF1726) CK627_01420 PF13718 GNAT acetyltransferase 2 CK627_01420 PF05127 Helicase CK627_01420 PF17176 tRNA-binding domain CK627_01430 PF00072 Response regulator receiver domain CK627_01430 PF01584 CheW-like domain CK627_01470 PF02660 Glycerol-3-phosphate acyltransferase CK627_01475 PF02152 Dihydroneopterin aldolase CK627_01480 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CK627_01490 PF07690 Major Facilitator Superfamily CK627_01495 PF02492 CobW/HypB/UreG, nucleotide-binding domain CK627_01495 PF07683 Cobalamin synthesis protein cobW C-terminal domain CK627_01500 PF04030 D-arabinono-1,4-lactone oxidase CK627_01500 PF01565 FAD binding domain CK627_01505 PF01810 LysE type translocator CK627_01510 PF03466 LysR substrate binding domain CK627_01510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_01515 PF00330 Aconitase family (aconitate hydratase) CK627_01515 PF06434 Aconitate hydratase 2 N-terminus CK627_01515 PF11791 Aconitate B N-terminal domain CK627_01520 PF01734 Patatin-like phospholipase CK627_01525 PF00672 HAMP domain CK627_01525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_01525 PF12729 Four helix bundle sensory module for signal transduction CK627_01530 PF12729 Four helix bundle sensory module for signal transduction CK627_01530 PF00672 HAMP domain CK627_01530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_01540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CK627_01540 PF07992 Pyridine nucleotide-disulphide oxidoreductase CK627_01545 PF02817 e3 binding domain CK627_01545 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CK627_01545 PF00364 Biotin-requiring enzyme CK627_01550 PF00456 Transketolase, thiamine diphosphate binding domain CK627_01550 PF17831 Pyruvate dehydrogenase E1 component middle domain CK627_01555 PF07729 FCD domain CK627_01555 PF00392 Bacterial regulatory proteins, gntR family CK627_01560 PF01510 N-acetylmuramoyl-L-alanine amidase CK627_01570 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CK627_01570 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CK627_01580 PF07963 Prokaryotic N-terminal methylation motif CK627_01585 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CK627_01585 PF00437 Type II/IV secretion system protein CK627_01590 PF00482 Type II secretion system (T2SS), protein F CK627_01595 PF01478 Type IV leader peptidase family CK627_01595 PF06750 Bacterial Peptidase A24 N-terminal domain CK627_01600 PF01121 Dephospho-CoA kinase CK627_01605 PF07072 Cell division protein CK627_01610 PF03884 DNA gyrase inhibitor YacG CK627_01615 PF00293 NUDIX domain CK627_01625 PF07517 SecA DEAD-like domain CK627_01625 PF02810 SEC-C motif CK627_01625 PF07516 SecA Wing and Scaffold domain CK627_01625 PF01043 SecA preprotein cross-linking domain CK627_01635 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CK627_01640 PF00091 Tubulin/FtsZ family, GTPase domain CK627_01640 PF12327 FtsZ family, C-terminal domain CK627_01645 PF02491 SHS2 domain inserted in FTSA CK627_01650 PF08478 POTRA domain, FtsQ-type CK627_01650 PF03799 Cell division protein FtsQ CK627_01655 PF08245 Mur ligase middle domain CK627_01655 PF02875 Mur ligase family, glutamate ligase domain CK627_01655 PF01225 Mur ligase family, catalytic domain CK627_01660 PF03033 Glycosyltransferase family 28 N-terminal domain CK627_01660 PF04101 Glycosyltransferase family 28 C-terminal domain CK627_01665 PF01098 Cell cycle protein CK627_01670 PF08245 Mur ligase middle domain CK627_01670 PF02875 Mur ligase family, glutamate ligase domain CK627_01680 PF01225 Mur ligase family, catalytic domain CK627_01680 PF08245 Mur ligase middle domain CK627_01680 PF02875 Mur ligase family, glutamate ligase domain CK627_01685 PF08245 Mur ligase middle domain CK627_01685 PF01225 Mur ligase family, catalytic domain CK627_01685 PF02875 Mur ligase family, glutamate ligase domain CK627_01690 PF00905 Penicillin binding protein transpeptidase domain CK627_01690 PF03717 Penicillin-binding Protein dimerisation domain CK627_01695 PF04999 Cell division protein FtsL CK627_01700 PF01795 MraW methylase family CK627_01705 PF02381 MraZ protein, putative antitoxin-like CK627_01715 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CK627_01720 PF04348 LppC putative lipoprotein CK627_01725 PF02021 Uncharacterised protein family UPF0102 CK627_01730 PF13580 SIS domain CK627_01735 PF04972 BON domain CK627_01740 PF04386 Stringent starvation protein B CK627_01745 PF00043 Glutathione S-transferase, C-terminal domain CK627_01745 PF02798 Glutathione S-transferase, N-terminal domain CK627_01750 PF02167 Cytochrome C1 family CK627_01755 PF00032 Cytochrome b(C-terminal)/b6/petD CK627_01755 PF00033 Cytochrome b/b6/petB CK627_01760 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CK627_01760 PF00355 Rieske [2Fe-2S] domain CK627_01765 PF00380 Ribosomal protein S9/S16 CK627_01770 PF00572 Ribosomal protein L13 CK627_01775 PF03969 AFG1-like ATPase CK627_01785 PF00595 PDZ domain CK627_01785 PF13180 PDZ domain CK627_01790 PF13180 PDZ domain CK627_01825 PF01979 Amidohydrolase family CK627_01830 PF03841 L-seryl-tRNA selenium transferase CK627_01835 PF07071 KDGP aldolase CK627_01840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CK627_01840 PF00874 PRD domain CK627_01840 PF05043 Mga helix-turn-helix domain CK627_01840 PF08279 HTH domain CK627_01845 PF00381 PTS HPr component phosphorylation site CK627_01850 PF03668 P-loop ATPase protein family CK627_01855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CK627_01860 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CK627_01865 PF04963 Sigma-54 factor, core binding domain CK627_01865 PF04552 Sigma-54, DNA binding domain CK627_01865 PF00309 Sigma-54 factor, Activator interacting domain (AID) CK627_01870 PF00005 ABC transporter CK627_01870 PF12399 Branched-chain amino acid ATP-binding cassette transporter CK627_01875 PF03968 OstA-like protein CK627_01880 PF06835 Lipopolysaccharide-assembly, LptC-related CK627_01890 PF01380 SIS domain CK627_01890 PF00571 CBS domain CK627_01895 PF00005 ABC transporter CK627_01900 PF02405 Permease MlaE CK627_01905 PF02470 MlaD protein CK627_01910 PF05494 MlaC protein CK627_01920 PF01722 BolA-like protein CK627_01925 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CK627_01930 PF01523 Putative modulator of DNA gyrase CK627_01935 PF04751 Protein of unknown function (DUF615) CK627_01945 PF04363 Protein of unknown function (DUF496) CK627_01975 PF07883 Cupin domain CK627_01975 PF01381 Helix-turn-helix CK627_01980 PF03594 Benzoate membrane transport protein CK627_01990 PF02219 Methylenetetrahydrofolate reductase CK627_02005 PF12729 Four helix bundle sensory module for signal transduction CK627_02005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_02005 PF00672 HAMP domain CK627_02010 PF03922 OmpW family CK627_02015 PF00990 Diguanylate cyclase, GGDEF domain CK627_02015 PF07694 5TMR of 5TMR-LYT CK627_02020 PF17760 UvrA interaction domain CK627_02020 PF17755 UvrA DNA-binding domain CK627_02020 PF00005 ABC transporter CK627_02025 PF00196 Bacterial regulatory proteins, luxR family CK627_02030 PF00436 Single-strand binding protein family CK627_02045 PF01545 Cation efflux family CK627_02045 PF16916 Dimerisation domain of Zinc Transporter CK627_02055 PF00313 'Cold-shock' DNA-binding domain CK627_02060 PF07715 TonB-dependent Receptor Plug Domain CK627_02060 PF00593 TonB dependent receptor CK627_02065 PF00563 EAL domain CK627_02065 PF00360 Phytochrome region CK627_02065 PF01590 GAF domain CK627_02065 PF00990 Diguanylate cyclase, GGDEF domain CK627_02070 PF00672 HAMP domain CK627_02070 PF00512 His Kinase A (phospho-acceptor) domain CK627_02070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_02075 PF00486 Transcriptional regulatory protein, C terminal CK627_02075 PF00072 Response regulator receiver domain CK627_02095 PF00990 Diguanylate cyclase, GGDEF domain CK627_02095 PF00072 Response regulator receiver domain CK627_02105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CK627_02110 PF03466 LysR substrate binding domain CK627_02110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_02125 PF13538 UvrD-like helicase C-terminal domain CK627_02130 PF00580 UvrD/REP helicase N-terminal domain CK627_02130 PF12705 PD-(D/E)XK nuclease superfamily CK627_02130 PF13361 UvrD-like helicase C-terminal domain CK627_02135 PF17946 RecC C-terminal domain CK627_02140 PF07681 DoxX CK627_02145 PF17954 Quercetinase C-terminal cupin domain CK627_02145 PF02678 Pirin CK627_02155 PF03466 LysR substrate binding domain CK627_02155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_02165 PF00392 Bacterial regulatory proteins, gntR family CK627_02165 PF07702 UTRA domain CK627_02180 PF00528 Binding-protein-dependent transport system inner membrane component CK627_02190 PF00005 ABC transporter CK627_02190 PF12857 TOBE-like domain CK627_02200 PF00990 Diguanylate cyclase, GGDEF domain CK627_02220 PF00583 Acetyltransferase (GNAT) family CK627_02250 PF01594 AI-2E family transporter CK627_02255 PF00106 short chain dehydrogenase CK627_02260 PF04371 Porphyromonas-type peptidyl-arginine deiminase CK627_02265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_02265 PF03466 LysR substrate binding domain CK627_02270 PF00158 Sigma-54 interaction domain CK627_02270 PF00989 PAS fold CK627_02270 PF02954 Bacterial regulatory protein, Fis family CK627_02275 PF00465 Iron-containing alcohol dehydrogenase CK627_02280 PF05524 PEP-utilising enzyme, N-terminal CK627_02280 PF00391 PEP-utilising enzyme, mobile domain CK627_02280 PF00381 PTS HPr component phosphorylation site CK627_02280 PF03610 PTS system fructose IIA component CK627_02285 PF02734 DAK2 domain CK627_02290 PF02733 Dak1 domain CK627_02295 PF00860 Permease family CK627_02335 PF00009 Elongation factor Tu GTP binding domain CK627_02335 PF03143 Elongation factor Tu C-terminal domain CK627_02335 PF03144 Elongation factor Tu domain 2 CK627_02340 PF00679 Elongation factor G C-terminus CK627_02340 PF03144 Elongation factor Tu domain 2 CK627_02340 PF14492 Elongation Factor G, domain II CK627_02340 PF00009 Elongation factor Tu GTP binding domain CK627_02340 PF03764 Elongation factor G, domain IV CK627_02345 PF00177 Ribosomal protein S7p/S5e CK627_02350 PF00164 Ribosomal protein S12/S23 CK627_02355 PF04077 DsrH like protein CK627_02360 PF02635 DsrE/DsrF-like family CK627_02365 PF02635 DsrE/DsrF-like family CK627_02370 PF01042 Endoribonuclease L-PSP CK627_02375 PF13309 HTH domain CK627_02375 PF08348 YheO-like PAS domain CK627_02380 PF04998 RNA polymerase Rpb1, domain 5 CK627_02380 PF04997 RNA polymerase Rpb1, domain 1 CK627_02380 PF04983 RNA polymerase Rpb1, domain 3 CK627_02380 PF00623 RNA polymerase Rpb1, domain 2 CK627_02380 PF05000 RNA polymerase Rpb1, domain 4 CK627_02385 PF10385 RNA polymerase beta subunit external 1 domain CK627_02385 PF04561 RNA polymerase Rpb2, domain 2 CK627_02385 PF00562 RNA polymerase Rpb2, domain 6 CK627_02385 PF04560 RNA polymerase Rpb2, domain 7 CK627_02385 PF04565 RNA polymerase Rpb2, domain 3 CK627_02385 PF04563 RNA polymerase beta subunit CK627_02390 PF00542 Ribosomal protein L7/L12 C-terminal domain CK627_02390 PF16320 Ribosomal protein L7/L12 dimerisation domain CK627_02395 PF00466 Ribosomal protein L10 CK627_02400 PF00687 Ribosomal protein L1p/L10e family CK627_02405 PF03946 Ribosomal protein L11, N-terminal domain CK627_02405 PF00298 Ribosomal protein L11, RNA binding domain CK627_02410 PF00467 KOW motif CK627_02410 PF02357 Transcription termination factor nusG CK627_02415 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CK627_02425 PF00009 Elongation factor Tu GTP binding domain CK627_02425 PF03144 Elongation factor Tu domain 2 CK627_02425 PF03143 Elongation factor Tu C-terminal domain CK627_02440 PF00485 Phosphoribulokinase / Uridine kinase family CK627_02445 PF08279 HTH domain CK627_02445 PF03099 Biotin/lipoate A/B protein ligase family CK627_02445 PF02237 Biotin protein ligase C terminal domain CK627_02450 PF01565 FAD binding domain CK627_02450 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CK627_02455 PF02254 TrkA-N domain CK627_02455 PF02080 TrkA-C domain CK627_02460 PF02386 Cation transport protein CK627_02465 PF12852 Cupin CK627_02465 PF12833 Helix-turn-helix domain CK627_02480 PF01751 Toprim domain CK627_02480 PF01131 DNA topoisomerase CK627_02485 PF03264 NapC/NirT cytochrome c family, N-terminal region CK627_02490 PF01568 Molydopterin dinucleotide binding domain CK627_02490 PF18364 Molybdopterin oxidoreductase N-terminal domain CK627_02490 PF00384 Molybdopterin oxidoreductase CK627_02500 PF08918 PhoQ Sensor CK627_02500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_02505 PF00486 Transcriptional regulatory protein, C terminal CK627_02505 PF00072 Response regulator receiver domain CK627_02520 PF01794 Ferric reductase like transmembrane component CK627_02525 PF00174 Oxidoreductase molybdopterin binding domain CK627_02535 PF06496 Protein of unknown function (DUF1097) CK627_02540 PF00158 Sigma-54 interaction domain CK627_02540 PF00072 Response regulator receiver domain CK627_02550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_02550 PF00512 His Kinase A (phospho-acceptor) domain CK627_02570 PF00478 IMP dehydrogenase / GMP reductase domain CK627_02570 PF00571 CBS domain CK627_02575 PF10063 Uncharacterized integral membrane protein (DUF2301) CK627_02585 PF01037 Lrp/AsnC ligand binding domain CK627_02590 PF03590 Aspartate-ammonia ligase CK627_02600 PF00004 ATPase family associated with various cellular activities (AAA) CK627_02600 PF07724 AAA domain (Cdc48 subfamily) CK627_02600 PF10431 C-terminal, D2-small domain, of ClpB protein CK627_02600 PF02861 Clp amino terminal domain, pathogenicity island component CK627_02600 PF17871 AAA lid domain CK627_02610 PF01479 S4 domain CK627_02610 PF00849 RNA pseudouridylate synthase CK627_02615 PF13525 Outer membrane lipoprotein CK627_02620 PF07992 Pyridine nucleotide-disulphide oxidoreductase CK627_02620 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CK627_02625 PF00375 Sodium:dicarboxylate symporter family CK627_02630 PF03313 Serine dehydratase alpha chain CK627_02640 PF02233 NAD(P) transhydrogenase beta subunit CK627_02645 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CK627_02645 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CK627_02645 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CK627_02650 PF00465 Iron-containing alcohol dehydrogenase CK627_02655 PF06719 AraC-type transcriptional regulator N-terminus CK627_02655 PF12833 Helix-turn-helix domain CK627_02660 PF08212 Lipocalin-like domain CK627_02665 PF02743 Cache domain CK627_02665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_02665 PF00672 HAMP domain CK627_02675 PF02666 Phosphatidylserine decarboxylase CK627_02690 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CK627_02690 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CK627_02695 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CK627_02695 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CK627_02700 PF02863 Arginine repressor, C-terminal domain CK627_02700 PF01316 Arginine repressor, DNA binding domain CK627_02705 PF03606 C4-dicarboxylate anaerobic carrier CK627_02710 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CK627_02710 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CK627_02715 PF00696 Amino acid kinase family CK627_02740 PF02743 Cache domain CK627_02740 PF00672 HAMP domain CK627_02740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_02745 PF02653 Branched-chain amino acid transport system / permease component CK627_02750 PF00005 ABC transporter CK627_02755 PF13407 Periplasmic binding protein domain CK627_02760 PF02929 Beta galactosidase small chain CK627_02760 PF00703 Glycosyl hydrolases family 2 CK627_02760 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CK627_02760 PF16353 Domain of unknown function(DUF4981) CK627_02760 PF02837 Glycosyl hydrolases family 2, sugar binding domain CK627_02765 PF00356 Bacterial regulatory proteins, lacI family CK627_02770 PF16363 GDP-mannose 4,6 dehydratase CK627_02775 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CK627_02775 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CK627_02780 PF00288 GHMP kinases N terminal domain CK627_02780 PF10509 Galactokinase galactose-binding signature CK627_02780 PF08544 GHMP kinases C terminal CK627_02785 PF01263 Aldose 1-epimerase CK627_02790 PF00248 Aldo/keto reductase family CK627_02795 PF02673 Bacitracin resistance protein BacA CK627_02800 PF12973 ChrR Cupin-like domain CK627_02805 PF04542 Sigma-70 region 2 CK627_02805 PF04545 Sigma-70, region 4 CK627_02815 PF05746 DALR anticodon binding domain CK627_02815 PF03485 Arginyl tRNA synthetase N terminal domain CK627_02815 PF00750 tRNA synthetases class I (R) CK627_02825 PF00227 Proteasome subunit CK627_02830 PF07724 AAA domain (Cdc48 subfamily) CK627_02830 PF10431 C-terminal, D2-small domain, of ClpB protein CK627_02830 PF00004 ATPase family associated with various cellular activities (AAA) CK627_02835 PF07690 Major Facilitator Superfamily CK627_02840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_02840 PF03466 LysR substrate binding domain CK627_02845 PF07992 Pyridine nucleotide-disulphide oxidoreductase CK627_02845 PF18267 Rubredoxin NAD+ reductase C-terminal domain CK627_02845 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CK627_02845 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CK627_02845 PF04324 BFD-like [2Fe-2S] binding domain CK627_02850 PF13806 Rieske-like [2Fe-2S] domain CK627_02855 PF01226 Formate/nitrite transporter CK627_02860 PF14824 Sirohaem biosynthesis protein central CK627_02860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CK627_02860 PF10414 Sirohaem synthase dimerisation region CK627_02865 PF01769 Divalent cation transporter CK627_02865 PF03448 MgtE intracellular N domain CK627_02865 PF00571 CBS domain CK627_02870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_02870 PF00672 HAMP domain CK627_02875 PF03737 Aldolase/RraA CK627_02880 PF02592 Putative vitamin uptake transporter CK627_02890 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CK627_02895 PF00034 Cytochrome c CK627_02900 PF00271 Helicase conserved C-terminal domain CK627_02900 PF16124 RecQ zinc-binding CK627_02900 PF00270 DEAD/DEAH box helicase CK627_02900 PF09382 RQC domain CK627_02900 PF00570 HRDC domain CK627_02905 PF03061 Thioesterase superfamily CK627_02920 PF03473 MOSC domain CK627_02920 PF03475 3-alpha domain CK627_02925 PF00528 Binding-protein-dependent transport system inner membrane component CK627_02930 PF00528 Binding-protein-dependent transport system inner membrane component CK627_02935 PF00005 ABC transporter CK627_02935 PF08402 TOBE domain CK627_02940 PF13416 Bacterial extracellular solute-binding protein CK627_02945 PF13416 Bacterial extracellular solute-binding protein CK627_02950 PF00202 Aminotransferase class-III CK627_02955 PF00120 Glutamine synthetase, catalytic domain CK627_02960 PF01258 Prokaryotic dksA/traR C4-type zinc finger CK627_02975 PF05981 CreA protein CK627_02980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CK627_02980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CK627_02985 PF00012 Hsp70 protein CK627_02990 PF03724 META domain CK627_03000 PF00128 Alpha amylase, catalytic domain CK627_03000 PF02903 Alpha amylase, N-terminal ig-like domain CK627_03005 PF02719 Polysaccharide biosynthesis protein CK627_03010 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CK627_03015 PF00483 Nucleotidyl transferase CK627_03020 PF07722 Peptidase C26 CK627_03025 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CK627_03025 PF00391 PEP-utilising enzyme, mobile domain CK627_03030 PF02911 Formyl transferase, C-terminal domain CK627_03030 PF00551 Formyl transferase CK627_03060 PF04989 Cephalosporin hydroxylase CK627_03065 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CK627_03070 PF08421 Putative zinc binding domain CK627_03070 PF08484 C-methyltransferase C-terminal domain CK627_03075 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CK627_03080 PF16363 GDP-mannose 4,6 dehydratase CK627_03085 PF00483 Nucleotidyl transferase CK627_03095 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CK627_03095 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CK627_03095 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CK627_03105 PF01501 Glycosyl transferase family 8 CK627_03110 PF00535 Glycosyl transferase family 2 CK627_03125 PF13193 AMP-binding enzyme C-terminal domain CK627_03125 PF00501 AMP-binding enzyme CK627_03145 PF02348 Cytidylyltransferase CK627_03155 PF03102 NeuB family CK627_03155 PF08666 SAF domain CK627_03175 PF09940 Domain of unknown function (DUF2172) CK627_03175 PF16221 winged helix-turn-helix CK627_03175 PF16254 Domain of unknown function (DUF4910) CK627_03210 PF05958 tRNA (Uracil-5-)-methyltransferase CK627_03215 PF00486 Transcriptional regulatory protein, C terminal CK627_03215 PF00072 Response regulator receiver domain CK627_03220 PF00672 HAMP domain CK627_03220 PF00512 His Kinase A (phospho-acceptor) domain CK627_03220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_03230 PF03949 Malic enzyme, NAD binding domain CK627_03230 PF00390 Malic enzyme, N-terminal domain CK627_03235 PF11066 Protein of unknown function (DUF2867) CK627_03235 PF13460 NAD(P)H-binding CK627_03240 PF01197 Ribosomal protein L31 CK627_03245 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CK627_03245 PF18074 Primosomal protein N C-terminal domain CK627_03245 PF00271 Helicase conserved C-terminal domain CK627_03245 PF00270 DEAD/DEAH box helicase CK627_03245 PF17764 3′ DNA-binding domain (3′BD) CK627_03255 PF00440 Bacterial regulatory proteins, tetR family CK627_03265 PF01389 OmpA-like transmembrane domain CK627_03265 PF00691 OmpA family CK627_03270 PF00585 C-terminal regulatory domain of Threonine dehydratase CK627_03270 PF00291 Pyridoxal-phosphate dependent enzyme CK627_03275 PF00920 Dehydratase family CK627_03280 PF01063 Amino-transferase class IV CK627_03290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CK627_03290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CK627_03290 PF00205 Thiamine pyrophosphate enzyme, central domain CK627_03295 PF01078 Magnesium chelatase, subunit ChlI CK627_03295 PF13335 Magnesium chelatase, subunit ChlI C-terminal CK627_03300 PF01553 Acyltransferase CK627_03305 PF01553 Acyltransferase CK627_03310 PF04463 Protein of unknown function (DUF523) CK627_03320 PF00857 Isochorismatase family CK627_03325 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CK627_03325 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CK627_03335 PF00005 ABC transporter CK627_03340 PF00528 Binding-protein-dependent transport system inner membrane component CK627_03345 PF01323 DSBA-like thioredoxin domain CK627_03350 PF01636 Phosphotransferase enzyme family CK627_03355 PF13746 4Fe-4S dicluster domain CK627_03355 PF12801 4Fe-4S binding domain CK627_03355 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CK627_03360 PF06288 Protein of unknown function (DUF1040) CK627_03365 PF00990 Diguanylate cyclase, GGDEF domain CK627_03365 PF00360 Phytochrome region CK627_03365 PF00563 EAL domain CK627_03365 PF01590 GAF domain CK627_03370 PF00376 MerR family regulatory protein CK627_03370 PF09278 MerR, DNA binding CK627_03375 PF00403 Heavy-metal-associated domain CK627_03380 PF00156 Phosphoribosyl transferase domain CK627_03385 PF03725 3' exoribonuclease family, domain 2 CK627_03385 PF01138 3' exoribonuclease family, domain 1 CK627_03390 PF08340 Domain of unknown function (DUF1732) CK627_03390 PF03755 YicC-like family, N-terminal region CK627_03395 PF00282 Pyridoxal-dependent decarboxylase conserved domain CK627_03405 PF00668 Condensation domain CK627_03405 PF00550 Phosphopantetheine attachment site CK627_03405 PF00501 AMP-binding enzyme CK627_03410 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CK627_03415 PF00501 AMP-binding enzyme CK627_03415 PF13193 AMP-binding enzyme C-terminal domain CK627_03415 PF00975 Thioesterase domain CK627_03415 PF00668 Condensation domain CK627_03415 PF00550 Phosphopantetheine attachment site CK627_03425 PF08021 Siderophore-interacting FAD-binding domain CK627_03425 PF00664 ABC transporter transmembrane region CK627_03425 PF00005 ABC transporter CK627_03425 PF04954 Siderophore-interacting protein CK627_03430 PF00005 ABC transporter CK627_03435 PF01032 FecCD transport family CK627_03440 PF01032 FecCD transport family CK627_03445 PF00005 ABC transporter CK627_03450 PF01497 Periplasmic binding protein CK627_03455 PF00593 TonB dependent receptor CK627_03455 PF07715 TonB-dependent Receptor Plug Domain CK627_03475 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) CK627_03490 PF01370 NAD dependent epimerase/dehydratase family CK627_03495 PF08360 QacR-like protein, C-terminal region CK627_03495 PF00440 Bacterial regulatory proteins, tetR family CK627_03500 PF00155 Aminotransferase class I and II CK627_03505 PF08240 Alcohol dehydrogenase GroES-like domain CK627_03505 PF00107 Zinc-binding dehydrogenase CK627_03510 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CK627_03515 PF00990 Diguanylate cyclase, GGDEF domain CK627_03515 PF13188 PAS domain CK627_03515 PF03707 Bacterial signalling protein N terminal repeat CK627_03515 PF00563 EAL domain CK627_03520 PF00580 UvrD/REP helicase N-terminal domain CK627_03520 PF13361 UvrD-like helicase C-terminal domain CK627_03525 PF00266 Aminotransferase class-V CK627_03530 PF02657 Fe-S metabolism associated domain CK627_03535 PF00899 ThiF family CK627_03570 PF01177 Asp/Glu/Hydantoin racemase CK627_03575 PF00593 TonB dependent receptor CK627_03575 PF07715 TonB-dependent Receptor Plug Domain CK627_03580 PF03466 LysR substrate binding domain CK627_03580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_03595 PF00731 AIR carboxylase CK627_03600 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CK627_03600 PF02222 ATP-grasp domain CK627_03605 PF07690 Major Facilitator Superfamily CK627_03610 PF04397 LytTr DNA-binding domain CK627_03610 PF00072 Response regulator receiver domain CK627_03615 PF07694 5TMR of 5TMR-LYT CK627_03615 PF06580 Histidine kinase CK627_03615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_03620 PF01810 LysE type translocator CK627_03625 PF07690 Major Facilitator Superfamily CK627_03635 PF00210 Ferritin-like domain CK627_03640 PF00990 Diguanylate cyclase, GGDEF domain CK627_03645 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CK627_03645 PF07055 Enoyl reductase FAD binding domain CK627_03645 PF12241 Trans-2-enoyl-CoA reductase catalytic region CK627_03650 PF00582 Universal stress protein family CK627_03655 PF00579 tRNA synthetases class I (W and Y) CK627_03660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_03660 PF03466 LysR substrate binding domain CK627_03680 PF00892 EamA-like transporter family CK627_03695 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CK627_03705 PF00625 Guanylate kinase CK627_03710 PF01192 RNA polymerase Rpb6 CK627_03715 PF04607 Region found in RelA / SpoT proteins CK627_03715 PF02824 TGS domain CK627_03715 PF13291 ACT domain CK627_03720 PF12105 SpoU, rRNA methylase, C-terminal CK627_03720 PF00588 SpoU rRNA Methylase family CK627_03725 PF00132 Bacterial transferase hexapeptide (six repeats) CK627_03730 PF12146 Serine aminopeptidase, S33 CK627_03745 PF00072 Response regulator receiver domain CK627_03745 PF02954 Bacterial regulatory protein, Fis family CK627_03745 PF14532 Sigma-54 interaction domain CK627_03750 PF00512 His Kinase A (phospho-acceptor) domain CK627_03750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_03750 PF00672 HAMP domain CK627_03760 PF07690 Major Facilitator Superfamily CK627_03795 PF00440 Bacterial regulatory proteins, tetR family CK627_03800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CK627_03805 PF00873 AcrB/AcrD/AcrF family CK627_03810 PF00512 His Kinase A (phospho-acceptor) domain CK627_03810 PF00497 Bacterial extracellular solute-binding proteins, family 3 CK627_03810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_03815 PF07992 Pyridine nucleotide-disulphide oxidoreductase CK627_03815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CK627_03825 PF03814 Potassium-transporting ATPase A subunit CK627_03835 PF02669 K+-transporting ATPase, c chain CK627_03840 PF00512 His Kinase A (phospho-acceptor) domain CK627_03840 PF13493 Domain of unknown function (DUF4118) CK627_03840 PF13492 GAF domain CK627_03840 PF02702 Osmosensitive K+ channel His kinase sensor domain CK627_03840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_03845 PF00486 Transcriptional regulatory protein, C terminal CK627_03845 PF00072 Response regulator receiver domain CK627_03850 PF07690 Major Facilitator Superfamily CK627_03865 PF00155 Aminotransferase class I and II CK627_03870 PF00011 Hsp20/alpha crystallin family CK627_03875 PF00011 Hsp20/alpha crystallin family CK627_03880 PF13280 WYL domain CK627_03880 PF08279 HTH domain CK627_03890 PF00986 DNA gyrase B subunit, carboxyl terminus CK627_03890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_03890 PF01751 Toprim domain CK627_03890 PF18053 DNA gyrase B subunit insert domain CK627_03890 PF00204 DNA gyrase B CK627_03895 PF02463 RecF/RecN/SMC N terminal domain CK627_03900 PF02768 DNA polymerase III beta subunit, C-terminal domain CK627_03900 PF02767 DNA polymerase III beta subunit, central domain CK627_03900 PF00712 DNA polymerase III beta subunit, N-terminal domain CK627_03905 PF00308 Bacterial dnaA protein CK627_03905 PF08299 Bacterial dnaA protein helix-turn-helix CK627_03905 PF11638 DnaA N-terminal domain CK627_03910 PF00497 Bacterial extracellular solute-binding proteins, family 3 CK627_03915 PF00528 Binding-protein-dependent transport system inner membrane component CK627_03920 PF00005 ABC transporter CK627_03925 PF00468 Ribosomal protein L34 CK627_03930 PF00825 Ribonuclease P CK627_03935 PF01809 Putative membrane protein insertion efficiency factor CK627_03940 PF14849 YidC periplasmic domain CK627_03940 PF02096 60Kd inner membrane protein CK627_03945 PF10396 GTP-binding protein TrmE N-terminus CK627_03945 PF12631 MnmE helical domain CK627_03945 PF01926 50S ribosome-binding GTPase CK627_03950 PF01032 FecCD transport family CK627_03960 PF00005 ABC transporter CK627_03965 PF00005 ABC transporter CK627_03970 PF00593 TonB dependent receptor CK627_03970 PF07715 TonB-dependent Receptor Plug Domain CK627_03975 PF00258 Flavodoxin CK627_03980 PF13932 GidA associated domain CK627_03980 PF01134 Glucose inhibited division protein A CK627_03985 PF02527 rRNA small subunit methyltransferase G CK627_03990 PF13614 AAA domain CK627_03995 PF02195 ParB-like nuclease domain CK627_03995 PF17762 HTH domain found in ParB protein CK627_04005 PF00119 ATP synthase A chain CK627_04010 PF00137 ATP synthase subunit C CK627_04015 PF00430 ATP synthase B/B' CF(0) CK627_04020 PF00213 ATP synthase delta (OSCP) subunit CK627_04025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CK627_04025 PF00306 ATP synthase alpha/beta chain, C terminal domain CK627_04025 PF02874 ATP synthase alpha/beta family, beta-barrel domain CK627_04030 PF00231 ATP synthase CK627_04035 PF02874 ATP synthase alpha/beta family, beta-barrel domain CK627_04035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CK627_04040 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CK627_04040 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CK627_04045 PF14602 Hexapeptide repeat of succinyl-transferase CK627_04045 PF12804 MobA-like NTP transferase domain CK627_04045 PF00132 Bacterial transferase hexapeptide (six repeats) CK627_04050 PF06123 Inner membrane protein CreD CK627_04055 PF00905 Penicillin binding protein transpeptidase domain CK627_04060 PF00512 His Kinase A (phospho-acceptor) domain CK627_04060 PF00672 HAMP domain CK627_04060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_04065 PF00072 Response regulator receiver domain CK627_04065 PF00486 Transcriptional regulatory protein, C terminal CK627_04070 PF00455 DeoR C terminal sensor domain CK627_04070 PF08220 DeoR-like helix-turn-helix domain CK627_04075 PF01380 SIS domain CK627_04080 PF00196 Bacterial regulatory proteins, luxR family CK627_04080 PF03472 Autoinducer binding domain CK627_04090 PF01618 MotA/TolQ/ExbB proton channel family CK627_04095 PF01618 MotA/TolQ/ExbB proton channel family CK627_04100 PF02472 Biopolymer transport protein ExbD/TolR CK627_04105 PF03544 Gram-negative bacterial TonB protein C-terminal CK627_04145 PF07969 Amidohydrolase family CK627_04150 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CK627_04155 PF01209 ubiE/COQ5 methyltransferase family CK627_04160 PF02036 SCP-2 sterol transfer family CK627_04165 PF03109 ABC1 family CK627_04170 PF02416 mttA/Hcf106 family CK627_04175 PF02416 mttA/Hcf106 family CK627_04180 PF00902 Sec-independent protein translocase protein (TatC) CK627_04185 PF01026 TatD related DNase CK627_04190 PF00490 Delta-aminolevulinic acid dehydratase CK627_04195 PF01432 Peptidase family M3 CK627_04200 PF00563 EAL domain CK627_04200 PF00990 Diguanylate cyclase, GGDEF domain CK627_04200 PF03707 Bacterial signalling protein N terminal repeat CK627_04205 PF00497 Bacterial extracellular solute-binding proteins, family 3 CK627_04210 PF04445 Putative SAM-dependent methyltransferase CK627_04225 PF02541 Ppx/GppA phosphatase family CK627_04230 PF00271 Helicase conserved C-terminal domain CK627_04230 PF00270 DEAD/DEAH box helicase CK627_04235 PF00085 Thioredoxin CK627_04240 PF07498 Rho termination factor, N-terminal domain CK627_04240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CK627_04240 PF07497 Rho termination factor, RNA-binding domain CK627_04250 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CK627_04255 PF00175 Oxidoreductase NAD-binding domain CK627_04260 PF04380 Membrane fusogenic activity CK627_04265 PF12262 Bacterial virulence factor lipase N-terminal CK627_04270 PF01694 Rhomboid family CK627_04270 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CK627_04275 PF00581 Rhodanese-like domain CK627_04290 PF00005 ABC transporter CK627_04295 PF00005 ABC transporter CK627_04295 PF12399 Branched-chain amino acid ATP-binding cassette transporter CK627_04300 PF02653 Branched-chain amino acid transport system / permease component CK627_04300 PF11862 Domain of unknown function (DUF3382) CK627_04305 PF02653 Branched-chain amino acid transport system / permease component CK627_04310 PF13458 Periplasmic binding protein CK627_04315 PF00356 Bacterial regulatory proteins, lacI family CK627_04320 PF11975 Family 4 glycosyl hydrolase C-terminal domain CK627_04320 PF02056 Family 4 glycosyl hydrolase CK627_04325 PF02378 Phosphotransferase system, EIIC CK627_04325 PF00367 phosphotransferase system, EIIB CK627_04330 PF00392 Bacterial regulatory proteins, gntR family CK627_04330 PF07702 UTRA domain CK627_04335 PF12801 4Fe-4S binding domain CK627_04340 PF03222 Tryptophan/tyrosine permease family CK627_04350 PF05932 Tir chaperone protein (CesT) family CK627_04355 PF03545 Yersinia virulence determinant (YopE) CK627_04355 PF03496 ADP-ribosyltransferase exoenzyme CK627_04375 PF01202 Shikimate kinase CK627_04385 PF05746 DALR anticodon binding domain CK627_04385 PF02092 Glycyl-tRNA synthetase beta subunit CK627_04390 PF02091 Glycyl-tRNA synthetase alpha subunit CK627_04395 PF03352 Methyladenine glycosylase CK627_04400 PF00672 HAMP domain CK627_04400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_04400 PF02743 Cache domain CK627_04405 PF13488 Glycine zipper CK627_04405 PF00691 OmpA family CK627_04410 PF01042 Endoribonuclease L-PSP CK627_04415 PF01206 Sulfurtransferase TusA CK627_04425 PF01547 Bacterial extracellular solute-binding protein CK627_04430 PF00512 His Kinase A (phospho-acceptor) domain CK627_04430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_04430 PF00672 HAMP domain CK627_04435 PF00486 Transcriptional regulatory protein, C terminal CK627_04435 PF00072 Response regulator receiver domain CK627_04440 PF02803 Thiolase, C-terminal domain CK627_04440 PF00108 Thiolase, N-terminal domain CK627_04445 PF00378 Enoyl-CoA hydratase/isomerase CK627_04445 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CK627_04445 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CK627_04450 PF00501 AMP-binding enzyme CK627_04450 PF13193 AMP-binding enzyme C-terminal domain CK627_04455 PF00557 Metallopeptidase family M24 CK627_04460 PF09186 Domain of unknown function (DUF1949) CK627_04460 PF01205 Uncharacterized protein family UPF0029 CK627_04465 PF02386 Cation transport protein CK627_04470 PF12724 Flavodoxin domain CK627_04500 PF00583 Acetyltransferase (GNAT) family CK627_04500 PF13380 CoA binding domain CK627_04500 PF13607 Succinyl-CoA ligase like flavodoxin domain CK627_04515 PF03466 LysR substrate binding domain CK627_04515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_04520 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CK627_04520 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CK627_04525 PF00342 Phosphoglucose isomerase CK627_04540 PF00924 Mechanosensitive ion channel CK627_04540 PF05552 Conserved TM helix CK627_04545 PF00440 Bacterial regulatory proteins, tetR family CK627_04550 PF00692 dUTPase CK627_04555 PF02441 Flavoprotein CK627_04555 PF04127 DNA / pantothenate metabolism flavoprotein CK627_04560 PF04002 RadC-like JAB domain CK627_04565 PF00830 Ribosomal L28 family CK627_04570 PF00471 Ribosomal protein L33 CK627_04580 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CK627_04580 PF06827 Zinc finger found in FPG and IleRS CK627_04580 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CK627_04585 PF04393 Protein of unknown function (DUF535) CK627_04590 PF01467 Cytidylyltransferase-like CK627_04595 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CK627_04600 PF00535 Glycosyl transferase family 2 CK627_04605 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CK627_04610 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CK627_04615 PF03611 PTS system sugar-specific permease component CK627_04625 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CK627_04630 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CK627_04630 PF00356 Bacterial regulatory proteins, lacI family CK627_04635 PF08240 Alcohol dehydrogenase GroES-like domain CK627_04635 PF00107 Zinc-binding dehydrogenase CK627_04655 PF03748 Flagellar basal body-associated protein FliL CK627_04660 PF04345 Chorismate lyase CK627_04665 PF01040 UbiA prenyltransferase family CK627_04670 PF01553 Acyltransferase CK627_04675 PF00717 Peptidase S24-like CK627_04675 PF01726 LexA DNA binding domain CK627_04690 PF02630 SCO1/SenC CK627_04695 PF01554 MatE CK627_04700 PF00588 SpoU rRNA Methylase family CK627_04705 PF16527 Two-component sensor protein CpxA, periplasmic domain CK627_04705 PF00672 HAMP domain CK627_04705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_04705 PF00512 His Kinase A (phospho-acceptor) domain CK627_04710 PF00072 Response regulator receiver domain CK627_04710 PF00486 Transcriptional regulatory protein, C terminal CK627_04715 PF01545 Cation efflux family CK627_04715 PF16916 Dimerisation domain of Zinc Transporter CK627_04720 PF06426 Serine acetyltransferase, N-terminal CK627_04720 PF00132 Bacterial transferase hexapeptide (six repeats) CK627_04730 PF06005 Cell division protein ZapB CK627_04740 PF01367 5'-3' exonuclease, C-terminal SAM fold CK627_04740 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CK627_04740 PF01612 3'-5' exonuclease CK627_04740 PF00476 DNA polymerase family A CK627_04745 PF00132 Bacterial transferase hexapeptide (six repeats) CK627_04785 PF00356 Bacterial regulatory proteins, lacI family CK627_04790 PF16353 Domain of unknown function(DUF4981) CK627_04790 PF00703 Glycosyl hydrolases family 2 CK627_04790 PF02837 Glycosyl hydrolases family 2, sugar binding domain CK627_04790 PF02929 Beta galactosidase small chain CK627_04790 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CK627_04795 PF04074 YhcH/YjgK/YiaL CK627_04800 PF13520 Amino acid permease CK627_04805 PF01588 Putative tRNA binding domain CK627_04810 PF13520 Amino acid permease CK627_04815 PF13593 SBF-like CPA transporter family (DUF4137) CK627_04820 PF03781 Sulfatase-modifying factor enzyme 1 CK627_04820 PF12867 DinB superfamily CK627_04830 PF00756 Putative esterase CK627_04835 PF00107 Zinc-binding dehydrogenase CK627_04835 PF08240 Alcohol dehydrogenase GroES-like domain CK627_04840 PF03466 LysR substrate binding domain CK627_04840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_04865 PF00580 UvrD/REP helicase N-terminal domain CK627_04865 PF13361 UvrD-like helicase C-terminal domain CK627_04895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_04895 PF03466 LysR substrate binding domain CK627_04915 PF14001 YdfZ protein CK627_04950 PF06206 CpeT/CpcT family (DUF1001) CK627_04960 PF01810 LysE type translocator CK627_04965 PF04143 Sulphur transport CK627_04970 PF00690 Cation transporter/ATPase, N-terminus CK627_04970 PF00689 Cation transporting ATPase, C-terminus CK627_04975 PF01810 LysE type translocator CK627_04980 PF12833 Helix-turn-helix domain CK627_04985 PF00892 EamA-like transporter family CK627_04995 PF00171 Aldehyde dehydrogenase family CK627_05000 PF07883 Cupin domain CK627_05000 PF01381 Helix-turn-helix CK627_05005 PF00202 Aminotransferase class-III CK627_05010 PF00171 Aldehyde dehydrogenase family CK627_05015 PF02540 NAD synthase CK627_05015 PF00117 Glutamine amidotransferase class-I CK627_05015 PF00958 GMP synthase C terminal domain CK627_05020 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CK627_05020 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CK627_05025 PF00294 pfkB family carbohydrate kinase CK627_05030 PF02082 Transcriptional regulator CK627_05045 PF02646 RmuC family CK627_05050 PF02386 Cation transport protein CK627_05055 PF02080 TrkA-C domain CK627_05055 PF02254 TrkA-N domain CK627_05060 PF01029 NusB family CK627_05060 PF01189 16S rRNA methyltransferase RsmB/F CK627_05065 PF02911 Formyl transferase, C-terminal domain CK627_05065 PF00551 Formyl transferase CK627_05070 PF01327 Polypeptide deformylase CK627_05080 PF17782 DprA winged helix domain CK627_05080 PF02481 DNA recombination-mediator protein A CK627_05085 PF04361 Protein of unknown function (DUF494) CK627_05090 PF01396 Topoisomerase DNA binding C4 zinc finger CK627_05095 PF00731 AIR carboxylase CK627_05100 PF01300 Telomere recombination CK627_05105 PF01218 Coproporphyrinogen III oxidase CK627_05110 PF08501 Shikimate dehydrogenase substrate binding domain CK627_05110 PF01488 Shikimate / quinate 5-dehydrogenase CK627_05110 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CK627_05115 PF07369 Protein of unknown function (DUF1488) CK627_05120 PF01926 50S ribosome-binding GTPase CK627_05125 PF00034 Cytochrome c CK627_05135 PF04220 Der GTPase activator (YihI) CK627_05140 PF10675 Protein of unknown function (DUF2489) CK627_05145 PF06969 HemN C-terminal domain CK627_05145 PF04055 Radical SAM superfamily CK627_05150 PF00962 Adenosine/AMP deaminase CK627_05155 PF00072 Response regulator receiver domain CK627_05155 PF02954 Bacterial regulatory protein, Fis family CK627_05155 PF00158 Sigma-54 interaction domain CK627_05160 PF00989 PAS fold CK627_05160 PF00512 His Kinase A (phospho-acceptor) domain CK627_05160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_05170 PF03951 Glutamine synthetase, beta-Grasp domain CK627_05170 PF00120 Glutamine synthetase, catalytic domain CK627_05180 PF03631 Virulence factor BrkB CK627_05185 PF03631 Virulence factor BrkB CK627_05190 PF02580 D-Tyr-tRNA(Tyr) deacylase CK627_05200 PF00583 Acetyltransferase (GNAT) family CK627_05200 PF09500 Putative thioesterase (yiiD_Cterm) CK627_05210 PF00270 DEAD/DEAH box helicase CK627_05210 PF00271 Helicase conserved C-terminal domain CK627_05210 PF17191 RecG wedge domain CK627_05215 PF13091 PLD-like domain CK627_05220 PF02447 GntP family permease CK627_05225 PF01202 Shikimate kinase CK627_05230 PF00920 Dehydratase family CK627_05235 PF01081 KDPG and KHG aldolase CK627_05240 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CK627_05240 PF00356 Bacterial regulatory proteins, lacI family CK627_05250 PF01551 Peptidase family M23 CK627_05255 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CK627_05255 PF01676 Metalloenzyme superfamily CK627_05260 PF00581 Rhodanese-like domain CK627_05265 PF02556 Preprotein translocase subunit SecB CK627_05270 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CK627_05270 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CK627_05275 PF01106 NifU-like domain CK627_05275 PF01521 Iron-sulphur cluster biosynthesis CK627_05280 PF00156 Phosphoribosyl transferase domain CK627_05285 PF00561 alpha/beta hydrolase fold CK627_05305 PF16921 Tex protein YqgF-like domain CK627_05305 PF09371 Tex-like protein N-terminal domain CK627_05305 PF17674 HHH domain CK627_05305 PF00575 S1 RNA binding domain CK627_05310 PF01272 Transcription elongation factor, GreA/GreB, C-term CK627_05310 PF03449 Transcription elongation factor, N-terminal CK627_05315 PF00486 Transcriptional regulatory protein, C terminal CK627_05315 PF00072 Response regulator receiver domain CK627_05320 PF00672 HAMP domain CK627_05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_05320 PF00512 His Kinase A (phospho-acceptor) domain CK627_05330 PF00338 Ribosomal protein S10p/S20e CK627_05335 PF00297 Ribosomal protein L3 CK627_05340 PF00573 Ribosomal protein L4/L1 family CK627_05345 PF00276 Ribosomal protein L23 CK627_05350 PF00181 Ribosomal Proteins L2, RNA binding domain CK627_05350 PF03947 Ribosomal Proteins L2, C-terminal domain CK627_05355 PF00203 Ribosomal protein S19 CK627_05360 PF00237 Ribosomal protein L22p/L17e CK627_05365 PF00189 Ribosomal protein S3, C-terminal domain CK627_05365 PF07650 KH domain CK627_05370 PF00252 Ribosomal protein L16p/L10e CK627_05375 PF00831 Ribosomal L29 protein CK627_05380 PF00366 Ribosomal protein S17 CK627_05385 PF00238 Ribosomal protein L14p/L23e CK627_05390 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CK627_05390 PF00467 KOW motif CK627_05395 PF00673 ribosomal L5P family C-terminus CK627_05395 PF00281 Ribosomal protein L5 CK627_05400 PF00253 Ribosomal protein S14p/S29e CK627_05405 PF00410 Ribosomal protein S8 CK627_05410 PF00347 Ribosomal protein L6 CK627_05415 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CK627_05420 PF00333 Ribosomal protein S5, N-terminal domain CK627_05420 PF03719 Ribosomal protein S5, C-terminal domain CK627_05425 PF00327 Ribosomal protein L30p/L7e CK627_05430 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CK627_05435 PF00344 SecY translocase CK627_05440 PF00444 Ribosomal protein L36 CK627_05445 PF00416 Ribosomal protein S13/S18 CK627_05450 PF00411 Ribosomal protein S11 CK627_05455 PF00163 Ribosomal protein S4/S9 N-terminal domain CK627_05455 PF01479 S4 domain CK627_05460 PF01000 RNA polymerase Rpb3/RpoA insert domain CK627_05460 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CK627_05460 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CK627_05465 PF01196 Ribosomal protein L17 CK627_05510 PF02254 TrkA-N domain CK627_05510 PF00999 Sodium/hydrogen exchanger family CK627_05515 PF02525 Flavodoxin-like fold CK627_05520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_05520 PF03466 LysR substrate binding domain CK627_05525 PF00106 short chain dehydrogenase CK627_05540 PF00326 Prolyl oligopeptidase family CK627_05540 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CK627_05545 PF16868 NMT1-like family CK627_05565 PF07947 YhhN family CK627_05570 PF07690 Major Facilitator Superfamily CK627_05575 PF13533 Biotin-lipoyl like CK627_05580 PF03466 LysR substrate binding domain CK627_05580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_05590 PF00375 Sodium:dicarboxylate symporter family CK627_05595 PF10678 Protein of unknown function (DUF2492) CK627_05600 PF01914 MarC family integral membrane protein CK627_05605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_05605 PF03466 LysR substrate binding domain CK627_05610 PF02416 mttA/Hcf106 family CK627_05620 PF01464 Transglycosylase SLT domain CK627_05625 PF13091 PLD-like domain CK627_05635 PF00440 Bacterial regulatory proteins, tetR family CK627_05655 PF02881 SRP54-type protein, helical bundle domain CK627_05655 PF00448 SRP54-type protein, GTPase domain CK627_05660 PF00005 ABC transporter CK627_05665 PF18075 FtsX extracellular domain CK627_05670 PF04545 Sigma-70, region 4 CK627_05670 PF04542 Sigma-70 region 2 CK627_05670 PF00140 Sigma-70 factor, region 1.2 CK627_05675 PF00484 Carbonic anhydrase CK627_05680 PF00392 Bacterial regulatory proteins, gntR family CK627_05680 PF07702 UTRA domain CK627_05685 PF01979 Amidohydrolase family CK627_05690 PF00491 Arginase family CK627_05695 PF01175 Urocanase Rossmann-like domain CK627_05695 PF17392 Urocanase C-terminal domain CK627_05695 PF17391 Urocanase N-terminal domain CK627_05700 PF00221 Aromatic amino acid lyase CK627_05705 PF01699 Sodium/calcium exchanger protein CK627_05710 PF00563 EAL domain CK627_05710 PF12792 CSS motif domain associated with EAL CK627_05715 PF00563 EAL domain CK627_05715 PF17157 Gammaproteobacterial periplasmic sensor domain CK627_05715 PF00990 Diguanylate cyclase, GGDEF domain CK627_05750 PF00263 Bacterial type II and III secretion system protein CK627_05750 PF03958 Bacterial type II/III secretion system short domain CK627_05765 PF00437 Type II/IV secretion system protein CK627_05765 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CK627_05770 PF00482 Type II secretion system (T2SS), protein F CK627_05785 PF07963 Prokaryotic N-terminal methylation motif CK627_05785 PF08334 Type II secretion system (T2SS), protein G CK627_05790 PF14245 Type IV pilin PilA CK627_05790 PF07963 Prokaryotic N-terminal methylation motif CK627_05820 PF04085 rod shape-determining protein MreC CK627_05825 PF04093 rod shape-determining protein MreD CK627_05830 PF02545 Maf-like protein CK627_05835 PF00575 S1 RNA binding domain CK627_05835 PF10150 Ribonuclease E/G family CK627_05840 PF13116 Protein of unknown function CK627_05840 PF13502 AsmA-like C-terminal region CK627_05855 PF00795 Carbon-nitrogen hydrolase CK627_05860 PF01523 Putative modulator of DNA gyrase CK627_05870 PF01914 MarC family integral membrane protein CK627_05875 PF07690 Major Facilitator Superfamily CK627_05885 PF00072 Response regulator receiver domain CK627_05890 PF01627 Hpt domain CK627_05890 PF00072 Response regulator receiver domain CK627_05890 PF00512 His Kinase A (phospho-acceptor) domain CK627_05890 PF00672 HAMP domain CK627_05890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_05890 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CK627_05895 PF13581 Histidine kinase-like ATPase domain CK627_05900 PF01740 STAS domain CK627_05900 PF08678 Rsbr N terminal CK627_05905 PF08447 PAS fold CK627_05905 PF13426 PAS domain CK627_05905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_05920 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CK627_05925 PF04228 Putative neutral zinc metallopeptidase CK627_05935 PF08668 HDOD domain CK627_05950 PF00999 Sodium/hydrogen exchanger family CK627_05955 PF02310 B12 binding domain CK627_05955 PF02607 B12 binding domain CK627_05955 PF02965 Vitamin B12 dependent methionine synthase, activation domain CK627_05955 PF00809 Pterin binding enzyme CK627_05955 PF02574 Homocysteine S-methyltransferase CK627_05960 PF18030 RimK PreATP-grasp domain CK627_05960 PF08443 RimK-like ATP-grasp domain CK627_05970 PF00072 Response regulator receiver domain CK627_05970 PF00486 Transcriptional regulatory protein, C terminal CK627_05980 PF01117 Aerolysin toxin CK627_05980 PF03440 Aerolysin/Pertussis toxin (APT) domain CK627_05985 PF01964 Radical SAM ThiC family CK627_05985 PF13667 ThiC-associated domain CK627_05990 PF02581 Thiamine monophosphate synthase CK627_05995 PF00899 ThiF family CK627_06005 PF05690 Thiazole biosynthesis protein ThiG CK627_06010 PF04055 Radical SAM superfamily CK627_06010 PF06968 Biotin and Thiamin Synthesis associated domain CK627_06035 PF13036 Peptidoglycan-synthase activator LpoB CK627_06055 PF00990 Diguanylate cyclase, GGDEF domain CK627_06055 PF17151 Periplasmic sensor domain CK627_06065 PF06055 Exopolysaccharide synthesis, ExoD CK627_06080 PF08803 Putative mono-oxygenase ydhR CK627_06085 PF01638 HxlR-like helix-turn-helix CK627_06090 PF00583 Acetyltransferase (GNAT) family CK627_06090 PF13508 Acetyltransferase (GNAT) domain CK627_06110 PF07715 TonB-dependent Receptor Plug Domain CK627_06110 PF00593 TonB dependent receptor CK627_06125 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CK627_06130 PF03692 Putative zinc- or iron-chelating domain CK627_06140 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CK627_06145 PF02602 Uroporphyrinogen-III synthase HemD CK627_06150 PF03900 Porphobilinogen deaminase, C-terminal domain CK627_06150 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CK627_06155 PF01295 Adenylate cyclase, class-I CK627_06155 PF12633 Adenylate cyclase NT domain CK627_06160 PF02230 Phospholipase/Carboxylesterase CK627_06165 PF01491 Frataxin-like domain CK627_06170 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CK627_06170 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CK627_06175 PF01678 Diaminopimelate epimerase CK627_06185 PF02899 Phage integrase, N-terminal SAM-like domain CK627_06185 PF00589 Phage integrase family CK627_06190 PF13419 Haloacid dehalogenase-like hydrolase CK627_06200 PF13545 Crp-like helix-turn-helix domain CK627_06200 PF00027 Cyclic nucleotide-binding domain CK627_06210 PF07722 Peptidase C26 CK627_06230 PF00005 ABC transporter CK627_06240 PF02464 Competence-damaged protein CK627_06240 PF00994 Probable molybdopterin binding domain CK627_06245 PF12072 Domain of unknown function (DUF3552) CK627_06245 PF00013 KH domain CK627_06245 PF01966 HD domain CK627_06250 PF04204 Homoserine O-succinyltransferase CK627_06260 PF01037 Lrp/AsnC ligand binding domain CK627_06265 PF00884 Sulfatase CK627_06280 PF00128 Alpha amylase, catalytic domain CK627_06280 PF16657 Maltogenic Amylase, C-terminal domain CK627_06280 PF02903 Alpha amylase, N-terminal ig-like domain CK627_06285 PF02308 MgtC family CK627_06305 PF00106 short chain dehydrogenase CK627_06310 PF03577 Peptidase family C69 CK627_06320 PF00465 Iron-containing alcohol dehydrogenase CK627_06330 PF01053 Cys/Met metabolism PLP-dependent enzyme CK627_06340 PF12793 Sugar transport-related sRNA regulator N-term CK627_06340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CK627_06355 PF03280 Proteobacterial lipase chaperone protein CK627_06360 PF00561 alpha/beta hydrolase fold CK627_06370 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CK627_06370 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CK627_06375 PF02698 DUF218 domain CK627_06380 PF08453 Peptidase family M9 N-terminal CK627_06380 PF01752 Collagenase CK627_06390 PF00419 Fimbrial protein CK627_06400 PF13953 PapC C-terminal domain CK627_06400 PF00577 Outer membrane usher protein CK627_06400 PF13954 PapC N-terminal domain CK627_06405 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CK627_06405 PF02753 Pili assembly chaperone PapD, C-terminal domain CK627_06415 PF00419 Fimbrial protein CK627_06425 PF00501 AMP-binding enzyme CK627_06430 PF13378 Enolase C-terminal domain-like CK627_06435 PF00378 Enoyl-CoA hydratase/isomerase CK627_06440 PF12697 Alpha/beta hydrolase family CK627_06445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CK627_06445 PF16582 Middle domain of thiamine pyrophosphate CK627_06445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CK627_06450 PF00425 chorismate binding enzyme CK627_06455 PF01040 UbiA prenyltransferase family CK627_06480 PF03880 DbpA RNA binding domain CK627_06480 PF00271 Helicase conserved C-terminal domain CK627_06480 PF00270 DEAD/DEAH box helicase CK627_06485 PF01773 Na+ dependent nucleoside transporter N-terminus CK627_06485 PF07662 Na+ dependent nucleoside transporter C-terminus CK627_06485 PF07670 Nucleoside recognition CK627_06505 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CK627_06510 PF01544 CorA-like Mg2+ transporter protein CK627_06530 PF02080 TrkA-C domain CK627_06530 PF00999 Sodium/hydrogen exchanger family CK627_06530 PF03471 Transporter associated domain CK627_06535 PF05068 Mannitol repressor CK627_06540 PF08125 Mannitol dehydrogenase C-terminal domain CK627_06540 PF01232 Mannitol dehydrogenase Rossmann domain CK627_06545 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CK627_06545 PF02378 Phosphotransferase system, EIIC CK627_06545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CK627_06555 PF00440 Bacterial regulatory proteins, tetR family CK627_06560 PF17876 Cold shock domain CK627_06560 PF00773 RNB domain CK627_06560 PF08206 Ribonuclease B OB domain CK627_06565 PF03466 LysR substrate binding domain CK627_06565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_06570 PF00765 Autoinducer synthase CK627_06575 PF03472 Autoinducer binding domain CK627_06575 PF00196 Bacterial regulatory proteins, luxR family CK627_06580 PF01810 LysE type translocator CK627_06585 PF00149 Calcineurin-like phosphoesterase CK627_06585 PF02872 5'-nucleotidase, C-terminal domain CK627_06590 PF05433 Glycine zipper 2TM domain CK627_06595 PF00583 Acetyltransferase (GNAT) family CK627_06605 PF01321 Creatinase/Prolidase N-terminal domain CK627_06605 PF00557 Metallopeptidase family M24 CK627_06610 PF00392 Bacterial regulatory proteins, gntR family CK627_06620 PF01430 Hsp33 protein CK627_06625 PF01479 S4 domain CK627_06630 PF11356 Type II secretion system protein C CK627_06635 PF03958 Bacterial type II/III secretion system short domain CK627_06635 PF00263 Bacterial type II and III secretion system protein CK627_06640 PF00437 Type II/IV secretion system protein CK627_06645 PF00482 Type II secretion system (T2SS), protein F CK627_06650 PF08334 Type II secretion system (T2SS), protein G CK627_06650 PF07963 Prokaryotic N-terminal methylation motif CK627_06655 PF12019 Type II transport protein GspH CK627_06655 PF07963 Prokaryotic N-terminal methylation motif CK627_06660 PF02501 Type II secretion system (T2SS), protein I CK627_06660 PF07963 Prokaryotic N-terminal methylation motif CK627_06665 PF11612 Type II secretion system (T2SS), protein J CK627_06665 PF07963 Prokaryotic N-terminal methylation motif CK627_06670 PF03934 Type II secretion system (T2SS), protein K CK627_06675 PF05134 Type II secretion system (T2SS), protein L CK627_06675 PF12693 GspL periplasmic domain CK627_06680 PF04612 Type II secretion system (T2SS), protein M CK627_06685 PF01203 Type II secretion system (T2SS), protein N CK627_06690 PF00196 Bacterial regulatory proteins, luxR family CK627_06695 PF01479 S4 domain CK627_06695 PF00579 tRNA synthetases class I (W and Y) CK627_06700 PF03466 LysR substrate binding domain CK627_06700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_06705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CK627_06710 PF13419 Haloacid dehalogenase-like hydrolase CK627_06715 PF00293 NUDIX domain CK627_06720 PF00459 Inositol monophosphatase family CK627_06725 PF03222 Tryptophan/tyrosine permease family CK627_06730 PF01588 Putative tRNA binding domain CK627_06735 PF12833 Helix-turn-helix domain CK627_06735 PF06445 GyrI-like small molecule binding domain CK627_06740 PF01340 Met Apo-repressor, MetJ CK627_06745 PF01053 Cys/Met metabolism PLP-dependent enzyme CK627_06750 PF00696 Amino acid kinase family CK627_06750 PF03447 Homoserine dehydrogenase, NAD binding domain CK627_06750 PF00742 Homoserine dehydrogenase CK627_06755 PF00311 Phosphoenolpyruvate carboxylase CK627_06760 PF01546 Peptidase family M20/M25/M40 CK627_06760 PF07687 Peptidase dimerisation domain CK627_06765 PF02774 Semialdehyde dehydrogenase, dimerisation domain CK627_06765 PF01118 Semialdehyde dehydrogenase, NAD binding domain CK627_06770 PF00696 Amino acid kinase family CK627_06775 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CK627_06775 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CK627_06780 PF00764 Arginosuccinate synthase CK627_06790 PF14698 Argininosuccinate lyase C-terminal CK627_06790 PF00206 Lyase CK627_06815 PF12464 Maltose acetyltransferase CK627_06815 PF14602 Hexapeptide repeat of succinyl-transferase CK627_06820 PF13194 Domain of unknown function (DUF4010) CK627_06835 PF00528 Binding-protein-dependent transport system inner membrane component CK627_06840 PF00528 Binding-protein-dependent transport system inner membrane component CK627_06845 PF12857 TOBE-like domain CK627_06845 PF00005 ABC transporter CK627_06850 PF03466 LysR substrate binding domain CK627_06850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_06855 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CK627_06855 PF18416 N-acetylglucosamine binding protein domain 2 CK627_06860 PF17200 Single Cache domain 2 CK627_06860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_06860 PF00672 HAMP domain CK627_06895 PF14685 Tricorn protease PDZ domain CK627_06895 PF14684 Tricorn protease C1 domain CK627_06895 PF07676 WD40-like Beta Propeller Repeat CK627_06895 PF03572 Peptidase family S41 CK627_06915 PF11230 Protein of unknown function (DUF3029) CK627_06920 PF04055 Radical SAM superfamily CK627_06930 PF03466 LysR substrate binding domain CK627_06930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_06935 PF00155 Aminotransferase class I and II CK627_06940 PF02583 Metal-sensitive transcriptional repressor CK627_06955 PF03714 Bacterial pullanase-associated domain CK627_06955 PF18494 Pullulanase Ins domain CK627_06955 PF11852 Domain of unknown function (DUF3372) CK627_06955 PF17967 Pullulanase N2 domain CK627_06955 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CK627_06960 PF00403 Heavy-metal-associated domain CK627_06965 PF08534 Redoxin CK627_06975 PF00270 DEAD/DEAH box helicase CK627_06975 PF00271 Helicase conserved C-terminal domain CK627_06990 PF03372 Endonuclease/Exonuclease/phosphatase family CK627_07005 PF06062 Uncharacterised protein family (UPF0231) CK627_07010 PF17853 GGDEF-like domain CK627_07010 PF05651 Putative sugar diacid recognition CK627_07010 PF13556 PucR C-terminal helix-turn-helix domain CK627_07015 PF02447 GntP family permease CK627_07020 PF02595 Glycerate kinase family CK627_07030 PF00255 Glutathione peroxidase CK627_07035 PF03466 LysR substrate binding domain CK627_07035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_07040 PF07670 Nucleoside recognition CK627_07040 PF01773 Na+ dependent nucleoside transporter N-terminus CK627_07040 PF07662 Na+ dependent nucleoside transporter C-terminus CK627_07045 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CK627_07045 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CK627_07050 PF00472 RF-1 domain CK627_07055 PF00543 Nitrogen regulatory protein P-II CK627_07060 PF13416 Bacterial extracellular solute-binding protein CK627_07070 PF00005 ABC transporter CK627_07070 PF08402 TOBE domain CK627_07075 PF04261 Dyp-type peroxidase family CK627_07080 PF02863 Arginine repressor, C-terminal domain CK627_07080 PF01316 Arginine repressor, DNA binding domain CK627_07085 PF00005 ABC transporter CK627_07090 PF00497 Bacterial extracellular solute-binding proteins, family 3 CK627_07095 PF00528 Binding-protein-dependent transport system inner membrane component CK627_07100 PF00528 Binding-protein-dependent transport system inner membrane component CK627_07105 PF00056 lactate/malate dehydrogenase, NAD binding domain CK627_07105 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CK627_07110 PF08238 Sel1 repeat CK627_07115 PF00175 Oxidoreductase NAD-binding domain CK627_07115 PF00970 Oxidoreductase FAD-binding domain CK627_07115 PF00042 Globin CK627_07120 PF02082 Transcriptional regulator CK627_07125 PF01595 Cyclin M transmembrane N-terminal domain CK627_07125 PF03471 Transporter associated domain CK627_07125 PF00571 CBS domain CK627_07130 PF01578 Cytochrome C assembly protein CK627_07135 PF02978 Signal peptide binding domain CK627_07135 PF02881 SRP54-type protein, helical bundle domain CK627_07135 PF00448 SRP54-type protein, GTPase domain CK627_07140 PF00886 Ribosomal protein S16 CK627_07145 PF01782 RimM N-terminal domain CK627_07145 PF05239 PRC-barrel domain CK627_07150 PF01746 tRNA (Guanine-1)-methyltransferase CK627_07155 PF01245 Ribosomal protein L19 CK627_07165 PF02976 DNA mismatch repair enzyme MutH CK627_07170 PF00293 NUDIX domain CK627_07175 PF00391 PEP-utilising enzyme, mobile domain CK627_07175 PF02896 PEP-utilising enzyme, TIM barrel domain CK627_07175 PF05524 PEP-utilising enzyme, N-terminal CK627_07175 PF01590 GAF domain CK627_07180 PF01790 Prolipoprotein diacylglyceryl transferase CK627_07185 PF00303 Thymidylate synthase CK627_07190 PF06965 Na+/H+ antiporter 1 CK627_07200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_07200 PF03466 LysR substrate binding domain CK627_07205 PF01022 Bacterial regulatory protein, arsR family CK627_07210 PF01649 Ribosomal protein S20 CK627_07215 PF03023 Lipid II flippase MurJ CK627_07220 PF01687 Riboflavin kinase CK627_07220 PF06574 FAD synthetase CK627_07225 PF08264 Anticodon-binding domain of tRNA CK627_07225 PF00133 tRNA synthetases class I (I, L, M and V) CK627_07225 PF06827 Zinc finger found in FPG and IleRS CK627_07230 PF01252 Signal peptidase (SPase) II CK627_07235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CK627_07240 PF02401 LytB protein CK627_07265 PF05567 Neisseria PilC beta-propeller domain CK627_07270 PF00114 Pilin (bacterial filament) CK627_07270 PF07963 Prokaryotic N-terminal methylation motif CK627_07300 PF00795 Carbon-nitrogen hydrolase CK627_07300 PF02540 NAD synthase CK627_07305 PF00543 Nitrogen regulatory protein P-II CK627_07315 PF02664 S-Ribosylhomocysteinase (LuxS) CK627_07320 PF00990 Diguanylate cyclase, GGDEF domain CK627_07325 PF08206 Ribonuclease B OB domain CK627_07325 PF17876 Cold shock domain CK627_07325 PF08461 Ribonuclease R winged-helix domain CK627_07325 PF00575 S1 RNA binding domain CK627_07325 PF00773 RNB domain CK627_07365 PF00588 SpoU rRNA Methylase family CK627_07365 PF08032 RNA 2'-O ribose methyltransferase substrate binding CK627_07375 PF13673 Acetyltransferase (GNAT) domain CK627_07380 PF00892 EamA-like transporter family CK627_07400 PF07690 Major Facilitator Superfamily CK627_07410 PF03466 LysR substrate binding domain CK627_07410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_07420 PF01566 Natural resistance-associated macrophage protein CK627_07425 PF01250 Ribosomal protein S6 CK627_07430 PF01084 Ribosomal protein S18 CK627_07435 PF03948 Ribosomal protein L9, C-terminal domain CK627_07435 PF01281 Ribosomal protein L9, N-terminal domain CK627_07440 PF00175 Oxidoreductase NAD-binding domain CK627_07440 PF00970 Oxidoreductase FAD-binding domain CK627_07465 PF00107 Zinc-binding dehydrogenase CK627_07465 PF08240 Alcohol dehydrogenase GroES-like domain CK627_07470 PF09335 SNARE associated Golgi protein CK627_07475 PF05193 Peptidase M16 inactive domain CK627_07475 PF00675 Insulinase (Peptidase family M16) CK627_07480 PF04262 Glutamate-cysteine ligase CK627_07485 PF00501 AMP-binding enzyme CK627_07495 PF00583 Acetyltransferase (GNAT) family CK627_07505 PF12592 Protein of unknown function (DUF3763) CK627_07505 PF17868 AAA lid domain CK627_07505 PF07728 AAA domain (dynein-related subfamily) CK627_07510 PF05762 VWA domain containing CoxE-like protein CK627_07520 PF01037 Lrp/AsnC ligand binding domain CK627_07525 PF00563 EAL domain CK627_07525 PF00990 Diguanylate cyclase, GGDEF domain CK627_07525 PF13426 PAS domain CK627_07535 PF00072 Response regulator receiver domain CK627_07535 PF00990 Diguanylate cyclase, GGDEF domain CK627_07540 PF16658 Class II release factor RF3, C-terminal domain CK627_07540 PF03144 Elongation factor Tu domain 2 CK627_07540 PF00009 Elongation factor Tu GTP binding domain CK627_07550 PF00583 Acetyltransferase (GNAT) family CK627_07555 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CK627_07565 PF04480 Protein of unknown function (DUF559) CK627_07570 PF03466 LysR substrate binding domain CK627_07570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_07575 PF04371 Porphyromonas-type peptidyl-arginine deiminase CK627_07580 PF01425 Amidase CK627_07585 PF00753 Metallo-beta-lactamase superfamily CK627_07595 PF02627 Carboxymuconolactone decarboxylase family CK627_07600 PF02525 Flavodoxin-like fold CK627_07610 PF00270 DEAD/DEAH box helicase CK627_07610 PF00271 Helicase conserved C-terminal domain CK627_07615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_07615 PF03466 LysR substrate binding domain CK627_07635 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase CK627_07640 PF00034 Cytochrome c CK627_07640 PF03150 Di-haem cytochrome c peroxidase CK627_07655 PF00445 Ribonuclease T2 family CK627_07665 PF03060 Nitronate monooxygenase CK627_07695 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CK627_07695 PF09297 NADH pyrophosphatase zinc ribbon domain CK627_07695 PF00293 NUDIX domain CK627_07700 PF00512 His Kinase A (phospho-acceptor) domain CK627_07700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_07700 PF00672 HAMP domain CK627_07700 PF16527 Two-component sensor protein CpxA, periplasmic domain CK627_07705 PF00486 Transcriptional regulatory protein, C terminal CK627_07705 PF00072 Response regulator receiver domain CK627_07710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CK627_07715 PF12704 MacB-like periplasmic core domain CK627_07715 PF00005 ABC transporter CK627_07715 PF02687 FtsX-like permease family CK627_07720 PF00497 Bacterial extracellular solute-binding proteins, family 3 CK627_07725 PF00005 ABC transporter CK627_07730 PF00528 Binding-protein-dependent transport system inner membrane component CK627_07735 PF00528 Binding-protein-dependent transport system inner membrane component CK627_07740 PF00291 Pyridoxal-phosphate dependent enzyme CK627_07745 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CK627_07745 PF00326 Prolyl oligopeptidase family CK627_07765 PF08335 GlnD PII-uridylyltransferase CK627_07765 PF03710 Glutamate-ammonia ligase adenylyltransferase CK627_07775 PF02743 Cache domain CK627_07775 PF00672 HAMP domain CK627_07775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_07780 PF00520 Ion transport protein CK627_07780 PF00027 Cyclic nucleotide-binding domain CK627_07785 PF08239 Bacterial SH3 domain CK627_07790 PF00171 Aldehyde dehydrogenase family CK627_07790 PF01619 Proline dehydrogenase CK627_07790 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CK627_07790 PF14850 DNA-binding domain of Proline dehydrogenase CK627_07795 PF09297 NADH pyrophosphatase zinc ribbon domain CK627_07795 PF00293 NUDIX domain CK627_07800 PF01208 Uroporphyrinogen decarboxylase (URO-D) CK627_07805 PF00480 ROK family CK627_07810 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CK627_07810 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CK627_07815 PF00162 Phosphoglycerate kinase CK627_07820 PF01116 Fructose-bisphosphate aldolase class-II CK627_07825 PF01266 FAD dependent oxidoreductase CK627_07845 PF11412 Disulphide bond corrector protein DsbC CK627_07845 PF02683 Cytochrome C biogenesis protein transmembrane region CK627_07850 PF03091 CutA1 divalent ion tolerance protein CK627_07865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_07865 PF03466 LysR substrate binding domain CK627_07870 PF01571 Aminomethyltransferase folate-binding domain CK627_07875 PF03937 Flavinator of succinate dehydrogenase CK627_07890 PF00890 FAD binding domain CK627_07890 PF02910 Fumarate reductase flavoprotein C-term CK627_07895 PF08281 Sigma-70, region 4 CK627_07895 PF04542 Sigma-70 region 2 CK627_07900 PF03872 Anti sigma-E protein RseA, N-terminal domain CK627_07900 PF03873 Anti sigma-E protein RseA, C-terminal domain CK627_07905 PF17188 MucB/RseB C-terminal domain CK627_07905 PF03888 MucB/RseB N-terminal domain CK627_07915 PF06421 GTP-binding protein LepA C-terminus CK627_07915 PF00679 Elongation factor G C-terminus CK627_07915 PF03144 Elongation factor Tu domain 2 CK627_07915 PF00009 Elongation factor Tu GTP binding domain CK627_07920 PF10502 Signal peptidase, peptidase S26 CK627_07925 PF00035 Double-stranded RNA binding motif CK627_07925 PF14622 Ribonuclease-III-like CK627_07930 PF07650 KH domain CK627_07930 PF01926 50S ribosome-binding GTPase CK627_07935 PF11967 Recombination protein O N terminal CK627_07935 PF02565 Recombination protein O C terminal CK627_07940 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CK627_07950 PF13580 SIS domain CK627_07955 PF13580 SIS domain CK627_07960 PF03613 PTS system mannose/fructose/sorbose family IID component CK627_07965 PF03609 PTS system sorbose-specific iic component CK627_07970 PF03830 PTS system sorbose subfamily IIB component CK627_07975 PF01116 Fructose-bisphosphate aldolase class-II CK627_07980 PF01979 Amidohydrolase family CK627_07985 PF03610 PTS system fructose IIA component CK627_07990 PF01380 SIS domain CK627_07995 PF08013 Tagatose 6 phosphate kinase CK627_08000 PF00455 DeoR C terminal sensor domain CK627_08000 PF08220 DeoR-like helix-turn-helix domain CK627_08005 PF01510 N-acetylmuramoyl-L-alanine amidase CK627_08010 PF07308 Protein of unknown function (DUF1456) CK627_08015 PF00672 HAMP domain CK627_08015 PF00072 Response regulator receiver domain CK627_08015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_08015 PF00512 His Kinase A (phospho-acceptor) domain CK627_08015 PF01627 Hpt domain CK627_08015 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CK627_08020 PF01938 TRAM domain CK627_08020 PF05958 tRNA (Uracil-5-)-methyltransferase CK627_08025 PF04607 Region found in RelA / SpoT proteins CK627_08025 PF02824 TGS domain CK627_08025 PF13291 ACT domain CK627_08030 PF03819 MazG nucleotide pyrophosphohydrolase domain CK627_08035 PF06418 CTP synthase N-terminus CK627_08035 PF00117 Glutamine amidotransferase class-I CK627_08040 PF00113 Enolase, C-terminal TIM barrel domain CK627_08040 PF03952 Enolase, N-terminal domain CK627_08045 PF04977 Septum formation initiator CK627_08050 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CK627_08055 PF02542 YgbB family CK627_08060 PF01142 tRNA pseudouridine synthase D (TruD) CK627_08065 PF01975 Survival protein SurE CK627_08075 PF09335 SNARE associated Golgi protein CK627_08080 PF01476 LysM domain CK627_08080 PF01551 Peptidase family M23 CK627_08085 PF00140 Sigma-70 factor, region 1.2 CK627_08085 PF04539 Sigma-70 region 3 CK627_08085 PF04545 Sigma-70, region 4 CK627_08085 PF04542 Sigma-70 region 2 CK627_08090 PF00814 Glycoprotease family CK627_08095 PF01165 Ribosomal protein S21 CK627_08100 PF09424 Yqey-like protein CK627_08105 PF01807 CHC2 zinc finger CK627_08105 PF10410 DnaB-helicase binding domain of primase CK627_08105 PF08278 DNA primase DnaG DnaB-binding CK627_08105 PF08275 DNA primase catalytic core, N-terminal domain CK627_08110 PF04539 Sigma-70 region 3 CK627_08110 PF04545 Sigma-70, region 4 CK627_08110 PF03979 Sigma-70 factor, region 1.1 CK627_08110 PF04546 Sigma-70, non-essential region CK627_08110 PF04542 Sigma-70 region 2 CK627_08110 PF00140 Sigma-70 factor, region 1.2 CK627_08190 PF02843 Phosphoribosylglycinamide synthetase, C domain CK627_08190 PF02844 Phosphoribosylglycinamide synthetase, N domain CK627_08190 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CK627_08195 PF01808 AICARFT/IMPCHase bienzyme CK627_08195 PF02142 MGS-like domain CK627_08200 PF13411 MerR HTH family regulatory protein CK627_08205 PF01872 RibD C-terminal domain CK627_08210 PF03889 Alternative ribosome-rescue factor A CK627_08215 PF04055 Radical SAM superfamily CK627_08215 PF06969 HemN C-terminal domain CK627_08220 PF01725 Ham1 family CK627_08225 PF07690 Major Facilitator Superfamily CK627_08230 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CK627_08230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CK627_08240 PF13302 Acetyltransferase (GNAT) domain CK627_08245 PF13302 Acetyltransferase (GNAT) domain CK627_08250 PF01447 Thermolysin metallopeptidase, catalytic domain CK627_08250 PF02868 Thermolysin metallopeptidase, alpha-helical domain CK627_08250 PF07504 Fungalysin/Thermolysin Propeptide Motif CK627_08250 PF03413 Peptidase propeptide and YPEB domain CK627_08250 PF04151 Bacterial pre-peptidase C-terminal domain CK627_08255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_08255 PF03466 LysR substrate binding domain CK627_08260 PF07690 Major Facilitator Superfamily CK627_08265 PF00267 Gram-negative porin CK627_08270 PF03605 Anaerobic c4-dicarboxylate membrane transporter CK627_08275 PF10415 Fumarase C C-terminus CK627_08275 PF00206 Lyase CK627_08280 PF04186 FxsA cytoplasmic membrane protein CK627_08290 PF00166 Chaperonin 10 Kd subunit CK627_08295 PF00118 TCP-1/cpn60 chaperonin family CK627_08305 PF00990 Diguanylate cyclase, GGDEF domain CK627_08305 PF00563 EAL domain CK627_08305 PF13188 PAS domain CK627_08305 PF03707 Bacterial signalling protein N terminal repeat CK627_08320 PF00072 Response regulator receiver domain CK627_08320 PF01584 CheW-like domain CK627_08325 PF13472 GDSL-like Lipase/Acylhydrolase family CK627_08330 PF00005 ABC transporter CK627_08340 PF08338 Domain of unknown function (DUF1731) CK627_08340 PF01370 NAD dependent epimerase/dehydratase family CK627_08345 PF12792 CSS motif domain associated with EAL CK627_08345 PF00563 EAL domain CK627_08350 PF00155 Aminotransferase class I and II CK627_08355 PF01483 Proprotein convertase P-domain CK627_08355 PF04389 Peptidase family M28 CK627_08360 PF02390 Putative methyltransferase CK627_08365 PF04320 Protein with unknown function (DUF469) CK627_08370 PF04960 Glutaminase CK627_08375 PF00581 Rhodanese-like domain CK627_08380 PF05922 Peptidase inhibitor I9 CK627_08380 PF00082 Subtilase family CK627_08385 PF06004 Bacterial protein of unknown function (DUF903) CK627_08390 PF00664 ABC transporter transmembrane region CK627_08390 PF00005 ABC transporter CK627_08395 PF00561 alpha/beta hydrolase fold CK627_08415 PF05547 Immune inhibitor A peptidase M6 CK627_08415 PF00801 PKD domain CK627_08420 PF06877 Regulator of ribonuclease activity B CK627_08425 PF00563 EAL domain CK627_08425 PF00990 Diguanylate cyclase, GGDEF domain CK627_08425 PF03707 Bacterial signalling protein N terminal repeat CK627_08445 PF09905 DNA-binding protein VF530 CK627_08450 PF02666 Phosphatidylserine decarboxylase CK627_08455 PF03193 RsgA GTPase CK627_08460 PF00929 Exonuclease CK627_08500 PF00313 'Cold-shock' DNA-binding domain CK627_08510 PF00672 HAMP domain CK627_08510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_08515 PF00749 tRNA synthetases class I (E and Q), catalytic domain CK627_08520 PF00749 tRNA synthetases class I (E and Q), catalytic domain CK627_08555 PF06483 Chitinase C CK627_08555 PF00704 Glycosyl hydrolases family 18 CK627_08570 PF02472 Biopolymer transport protein ExbD/TolR CK627_08575 PF01618 MotA/TolQ/ExbB proton channel family CK627_08580 PF01618 MotA/TolQ/ExbB proton channel family CK627_08590 PF00593 TonB dependent receptor CK627_08590 PF07715 TonB-dependent Receptor Plug Domain CK627_08595 PF00528 Binding-protein-dependent transport system inner membrane component CK627_08600 PF00528 Binding-protein-dependent transport system inner membrane component CK627_08600 PF12911 N-terminal TM domain of oligopeptide transport permease C CK627_08610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CK627_08610 PF00005 ABC transporter CK627_08615 PF00005 ABC transporter CK627_08615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CK627_08630 PF01546 Peptidase family M20/M25/M40 CK627_08630 PF07687 Peptidase dimerisation domain CK627_08640 PF00156 Phosphoribosyl transferase domain CK627_08650 PF07417 Sigma factor-binding transcriptional regulator Crl CK627_08655 PF00696 Amino acid kinase family CK627_08655 PF01472 PUA domain CK627_08660 PF00171 Aldehyde dehydrogenase family CK627_08670 PF00582 Universal stress protein family CK627_08690 PF00294 pfkB family carbohydrate kinase CK627_08695 PF04227 Indigoidine synthase A like protein CK627_08700 PF00194 Eukaryotic-type carbonic anhydrase CK627_08705 PF03150 Di-haem cytochrome c peroxidase CK627_08705 PF00034 Cytochrome c CK627_08740 PF00550 Phosphopantetheine attachment site CK627_08745 PF00550 Phosphopantetheine attachment site CK627_08755 PF13193 AMP-binding enzyme C-terminal domain CK627_08755 PF00501 AMP-binding enzyme CK627_08760 PF07977 FabA-like domain CK627_08770 PF00221 Aromatic amino acid lyase CK627_08795 PF02801 Beta-ketoacyl synthase, C-terminal domain CK627_08795 PF00109 Beta-ketoacyl synthase, N-terminal domain CK627_08810 PF00109 Beta-ketoacyl synthase, N-terminal domain CK627_08810 PF02801 Beta-ketoacyl synthase, C-terminal domain CK627_08820 PF00994 Probable molybdopterin binding domain CK627_08830 PF06738 Putative threonine/serine exporter CK627_08835 PF12821 Threonine/Serine exporter, ThrE CK627_08840 PF00186 Dihydrofolate reductase CK627_08845 PF00571 CBS domain CK627_08845 PF00005 ABC transporter CK627_08850 PF00528 Binding-protein-dependent transport system inner membrane component CK627_08855 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CK627_08860 PF01507 Phosphoadenosine phosphosulfate reductase family CK627_08865 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CK627_08865 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CK627_08870 PF00258 Flavodoxin CK627_08870 PF00175 Oxidoreductase NAD-binding domain CK627_08870 PF00667 FAD binding domain CK627_08875 PF02567 Phenazine biosynthesis-like protein CK627_08880 PF01336 OB-fold nucleic acid binding domain CK627_08880 PF00152 tRNA synthetases class II (D, K and N) CK627_08890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_08890 PF00672 HAMP domain CK627_08890 PF02743 Cache domain CK627_08895 PF03616 Sodium/glutamate symporter CK627_08900 PF00710 Asparaginase, N-terminal CK627_08900 PF17763 Glutaminase/Asparaginase C-terminal domain CK627_08905 PF07023 Protein of unknown function (DUF1315) CK627_08910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CK627_08910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CK627_08925 PF01343 Peptidase family S49 CK627_08930 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CK627_08930 PF07992 Pyridine nucleotide-disulphide oxidoreductase CK627_08940 PF00881 Nitroreductase family CK627_08945 PF12464 Maltose acetyltransferase CK627_08945 PF14602 Hexapeptide repeat of succinyl-transferase CK627_08950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CK627_08950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CK627_08960 PF00107 Zinc-binding dehydrogenase CK627_08960 PF08240 Alcohol dehydrogenase GroES-like domain CK627_08965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_08965 PF03466 LysR substrate binding domain CK627_08970 PF02378 Phosphotransferase system, EIIC CK627_08970 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CK627_08970 PF00367 phosphotransferase system, EIIB CK627_08975 PF00474 Sodium:solute symporter family CK627_08980 PF06196 Protein of unknown function (DUF997) CK627_08985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CK627_08985 PF02785 Biotin carboxylase C-terminal domain CK627_08985 PF00289 Biotin carboxylase, N-terminal domain CK627_08990 PF00364 Biotin-requiring enzyme CK627_08995 PF01220 Dehydroquinase class II CK627_09000 PF16177 Acetyl-coenzyme A synthetase N-terminus CK627_09000 PF13193 AMP-binding enzyme C-terminal domain CK627_09000 PF00501 AMP-binding enzyme CK627_09010 PF13188 PAS domain CK627_09010 PF03707 Bacterial signalling protein N terminal repeat CK627_09010 PF00990 Diguanylate cyclase, GGDEF domain CK627_09010 PF00563 EAL domain CK627_09030 PF02613 Nitrate reductase delta subunit CK627_09035 PF18364 Molybdopterin oxidoreductase N-terminal domain CK627_09035 PF00384 Molybdopterin oxidoreductase CK627_09035 PF01568 Molydopterin dinucleotide binding domain CK627_09040 PF03264 NapC/NirT cytochrome c family, N-terminal region CK627_09045 PF00486 Transcriptional regulatory protein, C terminal CK627_09045 PF00072 Response regulator receiver domain CK627_09055 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CK627_09060 PF00072 Response regulator receiver domain CK627_09060 PF00672 HAMP domain CK627_09060 PF00512 His Kinase A (phospho-acceptor) domain CK627_09060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_09060 PF01627 Hpt domain CK627_09070 PF00464 Serine hydroxymethyltransferase CK627_09085 PF03477 ATP cone domain CK627_09090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CK627_09090 PF01872 RibD C-terminal domain CK627_09095 PF00677 Lumazine binding domain CK627_09100 PF00925 GTP cyclohydrolase II CK627_09100 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CK627_09105 PF00885 6,7-dimethyl-8-ribityllumazine synthase CK627_09110 PF01029 NusB family CK627_09115 PF00586 AIR synthase related protein, N-terminal domain CK627_09115 PF02769 AIR synthase related protein, C-terminal domain CK627_09120 PF04608 Phosphatidylglycerophosphatase A CK627_09125 PF00005 ABC transporter CK627_09125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CK627_09130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CK627_09145 PF02779 Transketolase, pyrimidine binding domain CK627_09145 PF02780 Transketolase, C-terminal domain CK627_09145 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CK627_09150 PF00348 Polyprenyl synthetase CK627_09155 PF02609 Exonuclease VII small subunit CK627_09160 PF01618 MotA/TolQ/ExbB proton channel family CK627_09165 PF00691 OmpA family CK627_09165 PF13677 Membrane MotB of proton-channel complex MotA/MotB CK627_09170 PF01272 Transcription elongation factor, GreA/GreB, C-term CK627_09170 PF03449 Transcription elongation factor, N-terminal CK627_09180 PF01985 CRS1 / YhbY (CRM) domain CK627_09185 PF01728 FtsJ-like methyltransferase CK627_09190 PF06480 FtsH Extracellular CK627_09190 PF01434 Peptidase family M41 CK627_09190 PF17862 AAA+ lid domain CK627_09190 PF00004 ATPase family associated with various cellular activities (AAA) CK627_09195 PF00809 Pterin binding enzyme CK627_09200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CK627_09200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CK627_09200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CK627_09200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CK627_09205 PF00121 Triosephosphate isomerase CK627_09210 PF03840 Preprotein translocase SecG subunit CK627_09225 PF02576 RimP N-terminal domain CK627_09225 PF17384 RimP C-terminal SH3 domain CK627_09230 PF00575 S1 RNA binding domain CK627_09230 PF08529 NusA N-terminal domain CK627_09230 PF13184 NusA-like KH domain CK627_09235 PF00009 Elongation factor Tu GTP binding domain CK627_09235 PF11987 Translation-initiation factor 2 CK627_09235 PF08364 Bacterial translation initiation factor IF-2 associated region CK627_09235 PF04760 Translation initiation factor IF-2, N-terminal region CK627_09240 PF02033 Ribosome-binding factor A CK627_09245 PF01509 TruB family pseudouridylate synthase (N terminal domain) CK627_09245 PF09157 Pseudouridine synthase II TruB, C-terminal CK627_09245 PF16198 tRNA pseudouridylate synthase B C-terminal domain CK627_09250 PF00312 Ribosomal protein S15 CK627_09255 PF01138 3' exoribonuclease family, domain 1 CK627_09255 PF00013 KH domain CK627_09255 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CK627_09255 PF00575 S1 RNA binding domain CK627_09255 PF03725 3' exoribonuclease family, domain 2 CK627_09260 PF07690 Major Facilitator Superfamily CK627_09265 PF00990 Diguanylate cyclase, GGDEF domain CK627_09270 PF02635 DsrE/DsrF-like family CK627_09280 PF00206 Lyase CK627_09280 PF10415 Fumarase C C-terminus CK627_09285 PF03575 Peptidase family S51 CK627_09305 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CK627_09315 PF03734 L,D-transpeptidase catalytic domain CK627_09315 PF17969 L,D-transpeptidase C-terminal domain CK627_09325 PF01523 Putative modulator of DNA gyrase CK627_09330 PF01523 Putative modulator of DNA gyrase CK627_09335 PF00258 Flavodoxin CK627_09340 PF00589 Phage integrase family CK627_09340 PF02899 Phage integrase, N-terminal SAM-like domain CK627_09345 PF00990 Diguanylate cyclase, GGDEF domain CK627_09350 PF01741 Large-conductance mechanosensitive channel, MscL CK627_09360 PF01368 DHH family CK627_09360 PF17768 RecJ OB domain CK627_09360 PF02272 DHHA1 domain CK627_09365 PF13411 MerR HTH family regulatory protein CK627_09380 PF02508 Rnf-Nqr subunit, membrane protein CK627_09385 PF06821 Serine hydrolase CK627_09395 PF00665 Integrase core domain CK627_09410 PF03852 DNA mismatch endonuclease Vsr CK627_09415 PF00145 C-5 cytosine-specific DNA methylase CK627_09425 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CK627_09425 PF04055 Radical SAM superfamily CK627_09430 PF03099 Biotin/lipoate A/B protein ligase family CK627_09435 PF04359 Protein of unknown function (DUF493) CK627_09440 PF07943 Penicillin-binding protein 5, C-terminal domain CK627_09440 PF00768 D-alanyl-D-alanine carboxypeptidase CK627_09445 PF05036 Sporulation related domain CK627_09445 PF03330 Lytic transglycolase CK627_09450 PF13406 Transglycosylase SLT domain CK627_09455 PF01098 Cell cycle protein CK627_09460 PF00905 Penicillin binding protein transpeptidase domain CK627_09460 PF03717 Penicillin-binding Protein dimerisation domain CK627_09465 PF02590 Predicted SPOUT methyltransferase CK627_09475 PF01467 Cytidylyltransferase-like CK627_09490 PF08264 Anticodon-binding domain of tRNA CK627_09490 PF13603 Leucyl-tRNA synthetase, Domain 2 CK627_09490 PF00133 tRNA synthetases class I (I, L, M and V) CK627_09495 PF07295 Zinc-ribbon containing domain CK627_09500 PF00795 Carbon-nitrogen hydrolase CK627_09505 PF00571 CBS domain CK627_09505 PF03471 Transporter associated domain CK627_09510 PF02130 Uncharacterized protein family UPF0054 CK627_09515 PF02562 PhoH-like protein CK627_09520 PF04055 Radical SAM superfamily CK627_09520 PF01938 TRAM domain CK627_09520 PF00919 Uncharacterized protein family UPF0004 CK627_09525 PF01494 FAD binding domain CK627_09530 PF00857 Isochorismatase family CK627_09540 PF00990 Diguanylate cyclase, GGDEF domain CK627_09540 PF05230 MASE2 domain CK627_09555 PF13419 Haloacid dehalogenase-like hydrolase CK627_09565 PF07694 5TMR of 5TMR-LYT CK627_09565 PF00990 Diguanylate cyclase, GGDEF domain CK627_09575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CK627_09575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CK627_09585 PF09997 Predicted membrane protein (DUF2238) CK627_09590 PF01132 Elongation factor P (EF-P) OB domain CK627_09590 PF08207 Elongation factor P (EF-P) KOW-like domain CK627_09590 PF09285 Elongation factor P, C-terminal CK627_09600 PF00478 IMP dehydrogenase / GMP reductase domain CK627_09610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_09610 PF08521 Two-component sensor kinase N-terminal CK627_09610 PF00512 His Kinase A (phospho-acceptor) domain CK627_09615 PF00486 Transcriptional regulatory protein, C terminal CK627_09615 PF00072 Response regulator receiver domain CK627_09635 PF00501 AMP-binding enzyme CK627_09650 PF06224 Winged helix DNA-binding domain CK627_09670 PF02313 Fumarate reductase subunit D CK627_09675 PF02300 Fumarate reductase subunit C CK627_09680 PF13085 2Fe-2S iron-sulfur cluster binding domain CK627_09680 PF13183 4Fe-4S dicluster domain CK627_09685 PF00890 FAD binding domain CK627_09685 PF02910 Fumarate reductase flavoprotein C-term CK627_09695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_09695 PF00672 HAMP domain CK627_09695 PF02743 Cache domain CK627_09700 PF03009 Glycerophosphoryl diester phosphodiesterase family CK627_09705 PF12794 Mechanosensitive ion channel inner membrane domain 1 CK627_09705 PF00924 Mechanosensitive ion channel CK627_09705 PF12795 Mechanosensitive ion channel porin domain CK627_09715 PF01476 LysM domain CK627_09715 PF08525 Opacity-associated protein A N-terminal motif CK627_09715 PF01551 Peptidase family M23 CK627_09730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_09730 PF03466 LysR substrate binding domain CK627_09745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_09745 PF00672 HAMP domain CK627_09750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_09750 PF03466 LysR substrate binding domain CK627_09755 PF00905 Penicillin binding protein transpeptidase domain CK627_09755 PF00912 Transglycosylase CK627_09755 PF17092 Penicillin-binding protein OB-like domain CK627_09780 PF03958 Bacterial type II/III secretion system short domain CK627_09780 PF00263 Bacterial type II and III secretion system protein CK627_09780 PF11741 AMIN domain CK627_09780 PF07660 Secretin and TonB N terminus short domain CK627_09785 PF01202 Shikimate kinase CK627_09790 PF01761 3-dehydroquinate synthase CK627_09800 PF02086 D12 class N6 adenine-specific DNA methyltransferase CK627_09805 PF00834 Ribulose-phosphate 3 epimerase family CK627_09810 PF13419 Haloacid dehalogenase-like hydrolase CK627_09815 PF00579 tRNA synthetases class I (W and Y) CK627_09825 PF00117 Glutamine amidotransferase class-I CK627_09830 PF00202 Aminotransferase class-III CK627_09835 PF04958 Arginine N-succinyltransferase beta subunit CK627_09840 PF00171 Aldehyde dehydrogenase family CK627_09850 PF13419 Haloacid dehalogenase-like hydrolase CK627_09855 PF07690 Major Facilitator Superfamily CK627_09860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CK627_09860 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CK627_09860 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CK627_09860 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CK627_09860 PF10371 Domain of unknown function CK627_09880 PF00392 Bacterial regulatory proteins, gntR family CK627_09880 PF00155 Aminotransferase class I and II CK627_09890 PF00005 ABC transporter CK627_09890 PF12848 ABC transporter CK627_09905 PF11941 Domain of unknown function (DUF3459) CK627_09905 PF00128 Alpha amylase, catalytic domain CK627_09925 PF01048 Phosphorylase superfamily CK627_09930 PF04973 Nicotinamide mononucleotide transporter CK627_09935 PF02080 TrkA-C domain CK627_09935 PF03600 Citrate transporter CK627_09980 PF01926 50S ribosome-binding GTPase CK627_09980 PF06071 Protein of unknown function (DUF933) CK627_09985 PF01195 Peptidyl-tRNA hydrolase CK627_09990 PF02872 5'-nucleotidase, C-terminal domain CK627_09990 PF00149 Calcineurin-like phosphoesterase CK627_09995 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CK627_09995 PF14572 Phosphoribosyl synthetase-associated domain CK627_10005 PF08544 GHMP kinases C terminal CK627_10005 PF00288 GHMP kinases N terminal domain CK627_10010 PF03550 Outer membrane lipoprotein LolB CK627_10015 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CK627_10015 PF01488 Shikimate / quinate 5-dehydrogenase CK627_10015 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CK627_10020 PF00472 RF-1 domain CK627_10020 PF03462 PCRF domain CK627_10025 PF13847 Methyltransferase domain CK627_10025 PF17827 PrmC N-terminal domain CK627_10035 PF13369 Transglutaminase-like superfamily CK627_10040 PF00793 DAHP synthetase I family CK627_10045 PF00375 Sodium:dicarboxylate symporter family CK627_10050 PF01228 Glycine radical CK627_10055 PF03167 Uracil DNA glycosylase superfamily CK627_10070 PF00923 Transaldolase/Fructose-6-phosphate aldolase CK627_10075 PF01235 Sodium:alanine symporter family CK627_10080 PF11992 Domain of unknown function (DUF3488) CK627_10080 PF01841 Transglutaminase-like superfamily CK627_10080 PF13559 Domain of unknown function (DUF4129) CK627_10090 PF07726 ATPase family associated with various cellular activities (AAA) CK627_10090 PF17863 AAA lid domain CK627_10095 PF00144 Beta-lactamase CK627_10100 PF00854 POT family CK627_10105 PF03652 Holliday junction resolvase CK627_10110 PF02622 Uncharacterized ACR, COG1678 CK627_10115 PF00672 HAMP domain CK627_10115 PF12729 Four helix bundle sensory module for signal transduction CK627_10115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_10120 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CK627_10120 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CK627_10125 PF04452 RNA methyltransferase CK627_10130 PF04231 Endonuclease I CK627_10135 PF10263 SprT-like family CK627_10140 PF00438 S-adenosylmethionine synthetase, N-terminal domain CK627_10140 PF02773 S-adenosylmethionine synthetase, C-terminal domain CK627_10140 PF02772 S-adenosylmethionine synthetase, central domain CK627_10145 PF02780 Transketolase, C-terminal domain CK627_10145 PF02779 Transketolase, pyrimidine binding domain CK627_10145 PF00456 Transketolase, thiamine diphosphate binding domain CK627_10155 PF01042 Endoribonuclease L-PSP CK627_10160 PF01965 DJ-1/PfpI family CK627_10165 PF03702 Anhydro-N-acetylmuramic acid kinase CK627_10170 PF01551 Peptidase family M23 CK627_10170 PF01476 LysM domain CK627_10170 PF08525 Opacity-associated protein A N-terminal motif CK627_10175 PF00579 tRNA synthetases class I (W and Y) CK627_10180 PF01204 Trehalase CK627_10190 PF01161 Phosphatidylethanolamine-binding protein CK627_10200 PF03466 LysR substrate binding domain CK627_10200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_10210 PF00155 Aminotransferase class I and II CK627_10215 PF07690 Major Facilitator Superfamily CK627_10220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_10220 PF03466 LysR substrate binding domain CK627_10225 PF00106 short chain dehydrogenase CK627_10230 PF08496 Peptidase family S49 N-terminal CK627_10230 PF01343 Peptidase family S49 CK627_10235 PF04996 Succinylarginine dihydrolase CK627_10240 PF08272 Topoisomerase I zinc-ribbon-like CK627_10240 PF01396 Topoisomerase DNA binding C4 zinc finger CK627_10240 PF01131 DNA topoisomerase CK627_10240 PF01751 Toprim domain CK627_10255 PF08447 PAS fold CK627_10255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_10260 PF02838 Glycosyl hydrolase family 20, domain 2 CK627_10260 PF00728 Glycosyl hydrolase family 20, catalytic domain CK627_10265 PF01869 BadF/BadG/BcrA/BcrD ATPase family CK627_10275 PF00005 ABC transporter CK627_10275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CK627_10280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CK627_10280 PF00005 ABC transporter CK627_10285 PF00528 Binding-protein-dependent transport system inner membrane component CK627_10285 PF12911 N-terminal TM domain of oligopeptide transport permease C CK627_10290 PF00528 Binding-protein-dependent transport system inner membrane component CK627_10295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CK627_10300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_10300 PF09308 LuxQ, periplasmic CK627_10300 PF00072 Response regulator receiver domain CK627_10300 PF00512 His Kinase A (phospho-acceptor) domain CK627_10320 PF10725 Protein of unknown function (DUF2517) CK627_10340 PF05114 Protein of unknown function (DUF692) CK627_10360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_10360 PF08447 PAS fold CK627_10360 PF13426 PAS domain CK627_10375 PF04632 Fusaric acid resistance protein family CK627_10380 PF03453 MoeA N-terminal region (domain I and II) CK627_10380 PF03454 MoeA C-terminal region (domain IV) CK627_10380 PF00994 Probable molybdopterin binding domain CK627_10385 PF12804 MobA-like NTP transferase domain CK627_10390 PF00005 ABC transporter CK627_10395 PF00528 Binding-protein-dependent transport system inner membrane component CK627_10400 PF12849 PBP superfamily domain CK627_10405 PF00158 Sigma-54 interaction domain CK627_10405 PF00072 Response regulator receiver domain CK627_10405 PF02954 Bacterial regulatory protein, Fis family CK627_10410 PF00512 His Kinase A (phospho-acceptor) domain CK627_10410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_10410 PF00989 PAS fold CK627_10415 PF12728 Helix-turn-helix domain CK627_10415 PF12727 PBP superfamily domain CK627_10420 PF02634 FdhD/NarQ family CK627_10455 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CK627_10455 PF12838 4Fe-4S dicluster domain CK627_10455 PF00384 Molybdopterin oxidoreductase CK627_10455 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CK627_10455 PF01568 Molydopterin dinucleotide binding domain CK627_10455 PF00384 Molybdopterin oxidoreductase CK627_10455 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CK627_10455 PF01568 Molydopterin dinucleotide binding domain CK627_10455 PF12838 4Fe-4S dicluster domain CK627_10455 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CK627_10460 PF13247 4Fe-4S dicluster domain CK627_10470 PF00390 Malic enzyme, N-terminal domain CK627_10470 PF03949 Malic enzyme, NAD binding domain CK627_10485 PF00860 Permease family CK627_10490 PF00497 Bacterial extracellular solute-binding proteins, family 3 CK627_10495 PF00672 HAMP domain CK627_10495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_10505 PF10282 Lactonase, 7-bladed beta-propeller CK627_10515 PF00924 Mechanosensitive ion channel CK627_10515 PF12794 Mechanosensitive ion channel inner membrane domain 1 CK627_10515 PF12795 Mechanosensitive ion channel porin domain CK627_10520 PF02887 Pyruvate kinase, alpha/beta domain CK627_10520 PF00224 Pyruvate kinase, barrel domain CK627_10530 PF04389 Peptidase family M28 CK627_10530 PF04151 Bacterial pre-peptidase C-terminal domain CK627_10535 PF00999 Sodium/hydrogen exchanger family CK627_10535 PF02254 TrkA-N domain CK627_10545 PF04381 Putative exonuclease, RdgC CK627_10555 PF12320 Type 5 capsule protein repressor C-terminal domain CK627_10555 PF00149 Calcineurin-like phosphoesterase CK627_10565 PF01292 Prokaryotic cytochrome b561 CK627_10570 PF00072 Response regulator receiver domain CK627_10570 PF00990 Diguanylate cyclase, GGDEF domain CK627_10575 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CK627_10580 PF00391 PEP-utilising enzyme, mobile domain CK627_10580 PF02896 PEP-utilising enzyme, TIM barrel domain CK627_10580 PF05524 PEP-utilising enzyme, N-terminal CK627_10585 PF00381 PTS HPr component phosphorylation site CK627_10590 PF00291 Pyridoxal-phosphate dependent enzyme CK627_10595 PF00004 ATPase family associated with various cellular activities (AAA) CK627_10595 PF07724 AAA domain (Cdc48 subfamily) CK627_10595 PF10431 C-terminal, D2-small domain, of ClpB protein CK627_10595 PF17871 AAA lid domain CK627_10595 PF02861 Clp amino terminal domain, pathogenicity island component CK627_10605 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CK627_10605 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CK627_10610 PF00672 HAMP domain CK627_10610 PF01966 HD domain CK627_10615 PF01980 tRNA-methyltransferase O CK627_10615 PF18389 TrmO C-terminal domain CK627_10635 PF00664 ABC transporter transmembrane region CK627_10635 PF00005 ABC transporter CK627_10640 PF00664 ABC transporter transmembrane region CK627_10640 PF00005 ABC transporter CK627_10655 PF00072 Response regulator receiver domain CK627_10655 PF00486 Transcriptional regulatory protein, C terminal CK627_10665 PF03737 Aldolase/RraA CK627_10680 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CK627_10685 PF00588 SpoU rRNA Methylase family CK627_10690 PF13840 ACT domain CK627_10690 PF00742 Homoserine dehydrogenase CK627_10690 PF01842 ACT domain CK627_10690 PF00696 Amino acid kinase family CK627_10690 PF03447 Homoserine dehydrogenase, NAD binding domain CK627_10695 PF00288 GHMP kinases N terminal domain CK627_10695 PF08544 GHMP kinases C terminal CK627_10700 PF14821 Threonine synthase N terminus CK627_10700 PF00291 Pyridoxal-phosphate dependent enzyme CK627_10705 PF13474 SnoaL-like domain CK627_10720 PF12848 ABC transporter CK627_10720 PF00005 ABC transporter CK627_10730 PF01048 Phosphorylase superfamily CK627_10745 PF01627 Hpt domain CK627_10745 PF00512 His Kinase A (phospho-acceptor) domain CK627_10745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_10745 PF00072 Response regulator receiver domain CK627_10745 PF00497 Bacterial extracellular solute-binding proteins, family 3 CK627_10745 PF00989 PAS fold CK627_10750 PF00360 Phytochrome region CK627_10750 PF00563 EAL domain CK627_10750 PF01590 GAF domain CK627_10750 PF00990 Diguanylate cyclase, GGDEF domain CK627_10755 PF01627 Hpt domain CK627_10755 PF00672 HAMP domain CK627_10755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_10755 PF00512 His Kinase A (phospho-acceptor) domain CK627_10755 PF00072 Response regulator receiver domain CK627_10755 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CK627_10760 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CK627_10765 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CK627_10765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CK627_10770 PF02690 Na+/Pi-cotransporter CK627_10780 PF13520 Amino acid permease CK627_10785 PF00324 Amino acid permease CK627_10790 PF00202 Aminotransferase class-III CK627_10795 PF00171 Aldehyde dehydrogenase family CK627_10800 PF01381 Helix-turn-helix CK627_10800 PF07883 Cupin domain CK627_10805 PF01266 FAD dependent oxidoreductase CK627_10820 PF00816 H-NS histone family CK627_10825 PF00793 DAHP synthetase I family CK627_10830 PF04954 Siderophore-interacting protein CK627_10830 PF08021 Siderophore-interacting FAD-binding domain CK627_10835 PF02321 Outer membrane efflux protein CK627_10840 PF00005 ABC transporter CK627_10840 PF02687 FtsX-like permease family CK627_10840 PF12704 MacB-like periplasmic core domain CK627_10845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CK627_10855 PF02833 DHHA2 domain CK627_10855 PF01368 DHH family CK627_10860 PF02463 RecF/RecN/SMC N terminal domain CK627_10865 PF01513 ATP-NAD kinase CK627_10870 PF01025 GrpE CK627_10875 PF00012 Hsp70 protein CK627_10880 PF01556 DnaJ C terminal domain CK627_10880 PF00226 DnaJ domain CK627_10880 PF00684 DnaJ central domain CK627_10885 PF11471 Maltoporin periplasmic N-terminal extension CK627_10885 PF02264 LamB porin CK627_10890 PF00294 pfkB family carbohydrate kinase CK627_10895 PF00367 phosphotransferase system, EIIB CK627_10895 PF02378 Phosphotransferase system, EIIC CK627_10900 PF08244 Glycosyl hydrolases family 32 C terminal CK627_10900 PF00251 Glycosyl hydrolases family 32 N-terminal domain CK627_10905 PF00356 Bacterial regulatory proteins, lacI family CK627_10905 PF13407 Periplasmic binding protein domain CK627_10910 PF02308 MgtC family CK627_10925 PF01022 Bacterial regulatory protein, arsR family CK627_10930 PF04143 Sulphur transport CK627_10945 PF00873 AcrB/AcrD/AcrF family CK627_10950 PF00990 Diguanylate cyclase, GGDEF domain CK627_10950 PF03707 Bacterial signalling protein N terminal repeat CK627_10950 PF00563 EAL domain CK627_10955 PF03099 Biotin/lipoate A/B protein ligase family CK627_10955 PF10437 Bacterial lipoate protein ligase C-terminus CK627_10970 PF00873 AcrB/AcrD/AcrF family CK627_10975 PF00529 HlyD membrane-fusion protein of T1SS CK627_10975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CK627_10990 PF00873 AcrB/AcrD/AcrF family CK627_10995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CK627_11000 PF03372 Endonuclease/Exonuclease/phosphatase family CK627_11015 PF00011 Hsp20/alpha crystallin family CK627_11020 PF07690 Major Facilitator Superfamily CK627_11025 PF02424 ApbE family CK627_11030 PF00127 Copper binding proteins, plastocyanin/azurin family CK627_11045 PF01156 Inosine-uridine preferring nucleoside hydrolase CK627_11055 PF00034 Cytochrome c CK627_11055 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CK627_11065 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CK627_11065 PF06481 COX Aromatic Rich Motif CK627_11070 PF00115 Cytochrome C and Quinol oxidase polypeptide I CK627_11075 PF00510 Cytochrome c oxidase subunit III CK627_11080 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CK627_11085 PF01040 UbiA prenyltransferase family CK627_11090 PF07690 Major Facilitator Superfamily CK627_11105 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CK627_11110 PF00528 Binding-protein-dependent transport system inner membrane component CK627_11115 PF00005 ABC transporter CK627_11120 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CK627_11130 PF01773 Na+ dependent nucleoside transporter N-terminus CK627_11130 PF07662 Na+ dependent nucleoside transporter C-terminus CK627_11130 PF07670 Nucleoside recognition CK627_11180 PF00290 Tryptophan synthase alpha chain CK627_11185 PF00291 Pyridoxal-phosphate dependent enzyme CK627_11190 PF00218 Indole-3-glycerol phosphate synthase CK627_11190 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CK627_11195 PF00591 Glycosyl transferase family, a/b domain CK627_11195 PF02885 Glycosyl transferase family, helical bundle domain CK627_11200 PF00117 Glutamine amidotransferase class-I CK627_11200 PF02885 Glycosyl transferase family, helical bundle domain CK627_11200 PF00591 Glycosyl transferase family, a/b domain CK627_11205 PF00425 chorismate binding enzyme CK627_11205 PF04715 Anthranilate synthase component I, N terminal region CK627_11210 PF02811 PHP domain CK627_11215 PF01300 Telomere recombination CK627_11220 PF02616 Segregation and condensation protein ScpA CK627_11225 PF04079 Segregation and condensation complex subunit ScpB CK627_11230 PF00849 RNA pseudouridylate synthase CK627_11230 PF01479 S4 domain CK627_11250 PF08361 MAATS-type transcriptional repressor, C-terminal region CK627_11250 PF00440 Bacterial regulatory proteins, tetR family CK627_11255 PF00529 HlyD membrane-fusion protein of T1SS CK627_11255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CK627_11260 PF00873 AcrB/AcrD/AcrF family CK627_11265 PF02321 Outer membrane efflux protein CK627_11270 PF16363 GDP-mannose 4,6 dehydratase CK627_11275 PF04321 RmlD substrate binding domain CK627_11280 PF00483 Nucleotidyl transferase CK627_11285 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CK627_11290 PF00483 Nucleotidyl transferase CK627_11290 PF01050 Mannose-6-phosphate isomerase CK627_11295 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CK627_11295 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CK627_11295 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CK627_11295 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CK627_11300 PF16363 GDP-mannose 4,6 dehydratase CK627_11305 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CK627_11310 PF01061 ABC-2 type transporter CK627_11315 PF00005 ABC transporter CK627_11335 PF00293 NUDIX domain CK627_11345 PF01370 NAD dependent epimerase/dehydratase family CK627_11350 PF00953 Glycosyl transferase family 4 CK627_11355 PF02719 Polysaccharide biosynthesis protein CK627_11365 PF02397 Bacterial sugar transferase CK627_11385 PF13439 Glycosyltransferase Family 4 CK627_11385 PF00534 Glycosyl transferases group 1 CK627_11390 PF00535 Glycosyl transferase family 2 CK627_11395 PF00535 Glycosyl transferase family 2 CK627_11400 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CK627_11400 PF10531 SLBB domain CK627_11400 PF02563 Polysaccharide biosynthesis/export protein CK627_11405 PF01451 Low molecular weight phosphotyrosine protein phosphatase CK627_11410 PF13614 AAA domain CK627_11410 PF02706 Chain length determinant protein CK627_11410 PF13807 G-rich domain on putative tyrosine kinase CK627_11420 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF CK627_11425 PF06251 Capsule biosynthesis GfcC CK627_11430 PF06082 Exopolysaccharide biosynthesis protein YbjH CK627_11440 PF04337 Protein of unknown function, DUF480 CK627_11445 PF04434 SWIM zinc finger CK627_11445 PF00176 SNF2 family N-terminal domain CK627_11445 PF00271 Helicase conserved C-terminal domain CK627_11450 PF05472 DNA replication terminus site-binding protein (Ter protein) CK627_11460 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CK627_11465 PF00676 Dehydrogenase E1 component CK627_11470 PF02780 Transketolase, C-terminal domain CK627_11470 PF02779 Transketolase, pyrimidine binding domain CK627_11475 PF00364 Biotin-requiring enzyme CK627_11475 PF02817 e3 binding domain CK627_11475 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CK627_11480 PF00313 'Cold-shock' DNA-binding domain CK627_11505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CK627_11510 PF00892 EamA-like transporter family CK627_11515 PF08220 DeoR-like helix-turn-helix domain CK627_11515 PF00455 DeoR C terminal sensor domain CK627_11525 PF04055 Radical SAM superfamily CK627_11530 PF00923 Transaldolase/Fructose-6-phosphate aldolase CK627_11540 PF11871 Domain of unknown function (DUF3391) CK627_11540 PF01966 HD domain CK627_11545 PF01479 S4 domain CK627_11545 PF00849 RNA pseudouridylate synthase CK627_11555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CK627_11560 PF12850 Calcineurin-like phosphoesterase superfamily domain CK627_11575 PF13144 Chaperone for flagella basal body P-ring formation CK627_11580 PF00072 Response regulator receiver domain CK627_11580 PF01584 CheW-like domain CK627_11585 PF03705 CheR methyltransferase, all-alpha domain CK627_11585 PF01739 CheR methyltransferase, SAM binding domain CK627_11590 PF00460 Flagella basal body rod protein CK627_11595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CK627_11595 PF00460 Flagella basal body rod protein CK627_11605 PF00460 Flagella basal body rod protein CK627_11605 PF07559 Flagellar basal body protein FlaE CK627_11605 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CK627_11610 PF00460 Flagella basal body rod protein CK627_11610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CK627_11615 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CK627_11615 PF00460 Flagella basal body rod protein CK627_11620 PF02107 Flagellar L-ring protein CK627_11625 PF02119 Flagellar P-ring protein CK627_11630 PF10135 Rod binding protein CK627_11630 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CK627_11635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CK627_11635 PF00460 Flagella basal body rod protein CK627_11640 PF00669 Bacterial flagellin N-terminal helical region CK627_11645 PF03448 MgtE intracellular N domain CK627_11645 PF01769 Divalent cation transporter CK627_11645 PF00571 CBS domain CK627_11650 PF02541 Ppx/GppA phosphatase family CK627_11655 PF13090 Polyphosphate kinase C-terminal domain 2 CK627_11655 PF02503 Polyphosphate kinase middle domain CK627_11655 PF13089 Polyphosphate kinase N-terminal domain CK627_11655 PF17941 Polyphosphate kinase C-terminal domain 1 CK627_11660 PF01842 ACT domain CK627_11670 PF00158 Sigma-54 interaction domain CK627_11670 PF00072 Response regulator receiver domain CK627_11670 PF02954 Bacterial regulatory protein, Fis family CK627_11675 PF00512 His Kinase A (phospho-acceptor) domain CK627_11675 PF00989 PAS fold CK627_11675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_11680 PF00158 Sigma-54 interaction domain CK627_11680 PF02954 Bacterial regulatory protein, Fis family CK627_11685 PF01784 NIF3 (NGG1p interacting factor 3) CK627_11690 PF00551 Formyl transferase CK627_11695 PF02769 AIR synthase related protein, C-terminal domain CK627_11695 PF00586 AIR synthase related protein, N-terminal domain CK627_11710 PF00308 Bacterial dnaA protein CK627_11715 PF00463 Isocitrate lyase family CK627_11720 PF01274 Malate synthase CK627_11735 PF14437 MafB19-like deaminase CK627_11740 PF00528 Binding-protein-dependent transport system inner membrane component CK627_11745 PF00528 Binding-protein-dependent transport system inner membrane component CK627_11755 PF01895 PhoU domain CK627_11760 PF01595 Cyclin M transmembrane N-terminal domain CK627_11760 PF03471 Transporter associated domain CK627_11760 PF00571 CBS domain CK627_11775 PF13520 Amino acid permease CK627_11780 PF04116 Fatty acid hydroxylase superfamily CK627_11795 PF00005 ABC transporter CK627_11800 PF00528 Binding-protein-dependent transport system inner membrane component CK627_11805 PF00497 Bacterial extracellular solute-binding proteins, family 3 CK627_11810 PF07690 Major Facilitator Superfamily CK627_11815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_11815 PF05231 MASE1 CK627_11815 PF07730 Histidine kinase CK627_11820 PF00196 Bacterial regulatory proteins, luxR family CK627_11820 PF00072 Response regulator receiver domain CK627_11825 PF14760 Rnk N-terminus CK627_11825 PF01272 Transcription elongation factor, GreA/GreB, C-term CK627_11845 PF00245 Alkaline phosphatase CK627_11850 PF00245 Alkaline phosphatase CK627_11855 PF01926 50S ribosome-binding GTPase CK627_11860 PF07690 Major Facilitator Superfamily CK627_11875 PF06733 DEAD_2 CK627_11875 PF13307 Helicase C-terminal domain CK627_11880 PF13609 Gram-negative porin CK627_11890 PF00155 Aminotransferase class I and II CK627_11895 PF05872 Bacterial protein of unknown function (DUF853) CK627_11910 PF00753 Metallo-beta-lactamase superfamily CK627_11910 PF03772 Competence protein CK627_11915 PF00005 ABC transporter CK627_11915 PF00664 ABC transporter transmembrane region CK627_11920 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CK627_11925 PF03966 Trm112p-like protein CK627_11930 PF02348 Cytidylyltransferase CK627_11935 PF00072 Response regulator receiver domain CK627_11935 PF00196 Bacterial regulatory proteins, luxR family CK627_11940 PF08459 UvrC Helix-hairpin-helix N-terminal CK627_11940 PF02151 UvrB/uvrC motif CK627_11940 PF01541 GIY-YIG catalytic domain CK627_11945 PF01066 CDP-alcohol phosphatidyltransferase CK627_11980 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB CK627_11985 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) CK627_12005 PF13247 4Fe-4S dicluster domain CK627_12005 PF00037 4Fe-4S binding domain CK627_12010 PF03916 Polysulphide reductase, NrfD CK627_12015 PF00149 Calcineurin-like phosphoesterase CK627_12025 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CK627_12030 PF09190 DALR domain CK627_12030 PF01406 tRNA synthetases class I (C) catalytic domain CK627_12060 PF00990 Diguanylate cyclase, GGDEF domain CK627_12060 PF13185 GAF domain CK627_12090 PF01169 Uncharacterized protein family UPF0016 CK627_12095 PF01253 Translation initiation factor SUI1 CK627_12105 PF02421 Ferrous iron transport protein B CK627_12105 PF07664 Ferrous iron transport protein B C terminus CK627_12105 PF07670 Nucleoside recognition CK627_12120 PF00483 Nucleotidyl transferase CK627_12125 PF00437 Type II/IV secretion system protein CK627_12135 PF00497 Bacterial extracellular solute-binding proteins, family 3 CK627_12135 PF00072 Response regulator receiver domain CK627_12135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_12135 PF00512 His Kinase A (phospho-acceptor) domain CK627_12135 PF01627 Hpt domain CK627_12135 PF00989 PAS fold CK627_12140 PF01032 FecCD transport family CK627_12145 PF00005 ABC transporter CK627_12150 PF00793 DAHP synthetase I family CK627_12155 PF01219 Prokaryotic diacylglycerol kinase CK627_12160 PF01842 ACT domain CK627_12160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CK627_12160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CK627_12165 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CK627_12170 PF01812 5-formyltetrahydrofolate cyclo-ligase family CK627_12180 PF01113 Dihydrodipicolinate reductase, N-terminus CK627_12180 PF05173 Dihydrodipicolinate reductase, C-terminus CK627_12185 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CK627_12185 PF00117 Glutamine amidotransferase class-I CK627_12190 PF02142 MGS-like domain CK627_12190 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CK627_12190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CK627_12195 PF00682 HMGL-like CK627_12195 PF08502 LeuA allosteric (dimerisation) domain CK627_12210 PF07690 Major Facilitator Superfamily CK627_12215 PF07759 Protein of unknown function (DUF1615) CK627_12220 PF08378 Nuclease-related domain CK627_12260 PF00270 DEAD/DEAH box helicase CK627_12260 PF00271 Helicase conserved C-terminal domain CK627_12270 PF14521 Lysine-specific metallo-endopeptidase CK627_12285 PF00376 MerR family regulatory protein CK627_12285 PF09278 MerR, DNA binding CK627_12300 PF07992 Pyridine nucleotide-disulphide oxidoreductase CK627_12300 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CK627_12305 PF01493 GXGXG motif CK627_12305 PF01645 Conserved region in glutamate synthase CK627_12305 PF04898 Glutamate synthase central domain CK627_12305 PF00310 Glutamine amidotransferases class-II CK627_12310 PF16199 Radical_SAM C-terminal domain CK627_12310 PF04055 Radical SAM superfamily CK627_12315 PF00005 ABC transporter CK627_12315 PF03412 Peptidase C39 family CK627_12315 PF00664 ABC transporter transmembrane region CK627_12355 PF00324 Amino acid permease CK627_12365 PF03618 Kinase/pyrophosphorylase CK627_12370 PF02896 PEP-utilising enzyme, TIM barrel domain CK627_12370 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CK627_12370 PF00391 PEP-utilising enzyme, mobile domain CK627_12380 PF14310 Fibronectin type III-like domain CK627_12380 PF00933 Glycosyl hydrolase family 3 N terminal domain CK627_12380 PF01915 Glycosyl hydrolase family 3 C-terminal domain CK627_12390 PF00082 Subtilase family CK627_12390 PF01483 Proprotein convertase P-domain CK627_12410 PF03180 NLPA lipoprotein CK627_12415 PF01569 PAP2 superfamily CK627_12420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CK627_12420 PF11890 Domain of unknown function (DUF3410) CK627_12420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CK627_12425 PF02774 Semialdehyde dehydrogenase, dimerisation domain CK627_12425 PF01118 Semialdehyde dehydrogenase, NAD binding domain CK627_12435 PF01416 tRNA pseudouridine synthase CK627_12440 PF17848 Acetyl-coA carboxylase zinc finger domain CK627_12440 PF01039 Carboxyl transferase domain CK627_12445 PF08245 Mur ligase middle domain CK627_12445 PF02875 Mur ligase family, glutamate ligase domain CK627_12450 PF05036 Sporulation related domain CK627_12455 PF04358 DsrC like protein CK627_12460 PF12805 FUSC-like inner membrane protein yccS CK627_12465 PF01027 Inhibitor of apoptosis-promoting Bax1 CK627_12485 PF00884 Sulfatase CK627_12485 PF08019 Phosphoethanolamine transferase EptA/EptB CK627_12490 PF03706 Lysylphosphatidylglycerol synthase TM region CK627_12490 PF09924 Uncharacterised conserved protein (DUF2156) CK627_12500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_12500 PF08447 PAS fold CK627_12505 PF13426 PAS domain CK627_12505 PF00990 Diguanylate cyclase, GGDEF domain CK627_12505 PF00563 EAL domain CK627_12510 PF00849 RNA pseudouridylate synthase CK627_12520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CK627_12525 PF04209 homogentisate 1,2-dioxygenase CK627_12535 PF14497 Glutathione S-transferase, C-terminal domain CK627_12535 PF02798 Glutathione S-transferase, N-terminal domain CK627_12545 PF13537 Glutamine amidotransferase domain CK627_12545 PF00733 Asparagine synthase CK627_12555 PF00999 Sodium/hydrogen exchanger family CK627_12555 PF02254 TrkA-N domain CK627_12560 PF13344 Haloacid dehalogenase-like hydrolase CK627_12565 PF00962 Adenosine/AMP deaminase CK627_12570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CK627_12575 PF03741 Integral membrane protein TerC family CK627_12575 PF03471 Transporter associated domain CK627_12585 PF13183 4Fe-4S dicluster domain CK627_12585 PF01565 FAD binding domain CK627_12585 PF02913 FAD linked oxidases, C-terminal domain CK627_12595 PF03061 Thioesterase superfamily CK627_12600 PF00271 Helicase conserved C-terminal domain CK627_12600 PF03880 DbpA RNA binding domain CK627_12600 PF00270 DEAD/DEAH box helicase CK627_12605 PF13726 Na+-H+ antiporter family CK627_12605 PF03553 Na+/H+ antiporter family CK627_12610 PF00929 Exonuclease CK627_12615 PF12729 Four helix bundle sensory module for signal transduction CK627_12615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_12615 PF00672 HAMP domain CK627_12620 PF18393 MotY N-terminal domain CK627_12620 PF00691 OmpA family CK627_12625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CK627_12630 PF10576 Iron-sulfur binding domain of endonuclease III CK627_12630 PF00633 Helix-hairpin-helix motif CK627_12630 PF00730 HhH-GPD superfamily base excision DNA repair protein CK627_12635 PF02508 Rnf-Nqr subunit, membrane protein CK627_12640 PF04205 FMN-binding domain CK627_12645 PF03116 NQR2, RnfD, RnfE family CK627_12650 PF13375 RnfC Barrel sandwich hybrid domain CK627_12650 PF10531 SLBB domain CK627_12650 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CK627_12650 PF12838 4Fe-4S dicluster domain CK627_12655 PF04060 Putative Fe-S cluster CK627_12660 PF02508 Rnf-Nqr subunit, membrane protein CK627_12665 PF00892 EamA-like transporter family CK627_12670 PF13426 PAS domain CK627_12670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_12670 PF08447 PAS fold CK627_12680 PF00717 Peptidase S24-like CK627_12680 PF01381 Helix-turn-helix CK627_12810 PF08461 Ribonuclease R winged-helix domain CK627_12815 PF11985 Protein of unknown function (DUF3486) CK627_12820 PF03237 Terminase-like family CK627_12825 PF06074 Protein of unknown function (DUF935) CK627_12845 PF10123 Mu-like prophage I protein CK627_12850 PF10124 Mu-like prophage major head subunit gpT CK627_12915 PF12241 Trans-2-enoyl-CoA reductase catalytic region CK627_12915 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CK627_12915 PF07055 Enoyl reductase FAD binding domain CK627_12920 PF03606 C4-dicarboxylate anaerobic carrier CK627_12925 PF12794 Mechanosensitive ion channel inner membrane domain 1 CK627_12925 PF12795 Mechanosensitive ion channel porin domain CK627_12925 PF00924 Mechanosensitive ion channel CK627_12930 PF00155 Aminotransferase class I and II CK627_12940 PF00462 Glutaredoxin CK627_12945 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CK627_12950 PF04851 Type III restriction enzyme, res subunit CK627_12950 PF00271 Helicase conserved C-terminal domain CK627_12955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CK627_12955 PF00529 HlyD membrane-fusion protein of T1SS CK627_12960 PF11742 Protein of unknown function (DUF3302) CK627_12965 PF02554 Carbon starvation protein CstA CK627_12970 PF00072 Response regulator receiver domain CK627_12970 PF04397 LytTr DNA-binding domain CK627_12975 PF06580 Histidine kinase CK627_12975 PF07694 5TMR of 5TMR-LYT CK627_12980 PF01966 HD domain CK627_12985 PF00465 Iron-containing alcohol dehydrogenase CK627_12985 PF00171 Aldehyde dehydrogenase family CK627_12995 PF01914 MarC family integral membrane protein CK627_13000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CK627_13005 PF00528 Binding-protein-dependent transport system inner membrane component CK627_13010 PF00528 Binding-protein-dependent transport system inner membrane component CK627_13010 PF12911 N-terminal TM domain of oligopeptide transport permease C CK627_13015 PF00005 ABC transporter CK627_13015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CK627_13020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CK627_13020 PF00005 ABC transporter CK627_13025 PF03741 Integral membrane protein TerC family CK627_13030 PF00842 Alanine racemase, C-terminal domain CK627_13030 PF01168 Alanine racemase, N-terminal domain CK627_13040 PF00375 Sodium:dicarboxylate symporter family CK627_13055 PF01979 Amidohydrolase family CK627_13065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_13065 PF00672 HAMP domain CK627_13070 PF01230 HIT domain CK627_13105 PF13721 SecD export protein N-terminal TM region CK627_13105 PF02355 Protein export membrane protein CK627_13105 PF07549 SecD/SecF GG Motif CK627_13110 PF02355 Protein export membrane protein CK627_13110 PF07549 SecD/SecF GG Motif CK627_13115 PF08447 PAS fold CK627_13115 PF13426 PAS domain CK627_13115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_13125 PF05661 Protein of unknown function (DUF808) CK627_13130 PF08439 Oligopeptidase F CK627_13130 PF01432 Peptidase family M3 CK627_13135 PF01432 Peptidase family M3 CK627_13135 PF08439 Oligopeptidase F CK627_13140 PF00860 Permease family CK627_13150 PF05728 Uncharacterised protein family (UPF0227) CK627_13155 PF07992 Pyridine nucleotide-disulphide oxidoreductase CK627_13175 PF01906 Putative heavy-metal-binding CK627_13185 PF02016 LD-carboxypeptidase N-terminal domain CK627_13185 PF17676 LD-carboxypeptidase C-terminal domain CK627_13190 PF00884 Sulfatase CK627_13200 PF01842 ACT domain CK627_13200 PF00696 Amino acid kinase family CK627_13205 PF00583 Acetyltransferase (GNAT) family CK627_13205 PF00696 Amino acid kinase family CK627_13210 PF01625 Peptide methionine sulfoxide reductase CK627_13230 PF00561 alpha/beta hydrolase fold CK627_13235 PF03466 LysR substrate binding domain CK627_13235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_13240 PF02652 L-lactate permease CK627_13245 PF02754 Cysteine-rich domain CK627_13250 PF11870 Domain of unknown function (DUF3390) CK627_13250 PF02589 LUD domain CK627_13250 PF13183 4Fe-4S dicluster domain CK627_13255 PF02589 LUD domain CK627_13260 PF02913 FAD linked oxidases, C-terminal domain CK627_13260 PF01565 FAD binding domain CK627_13280 PF00005 ABC transporter CK627_13290 PF03600 Citrate transporter CK627_13300 PF07690 Major Facilitator Superfamily CK627_13315 PF01593 Flavin containing amine oxidoreductase CK627_13320 PF03239 Iron permease FTR1 family CK627_13345 PF13533 Biotin-lipoyl like CK627_13360 PF01740 STAS domain CK627_13360 PF00916 Sulfate permease family CK627_13375 PF01168 Alanine racemase, N-terminal domain CK627_13375 PF00842 Alanine racemase, C-terminal domain CK627_13380 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CK627_13380 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CK627_13385 PF13247 4Fe-4S dicluster domain CK627_13390 PF03916 Polysulphide reductase, NrfD CK627_13395 PF00374 Nickel-dependent hydrogenase CK627_13400 PF01750 Hydrogenase maturation protease CK627_13405 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE CK627_13410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CK627_13415 PF00528 Binding-protein-dependent transport system inner membrane component CK627_13420 PF00528 Binding-protein-dependent transport system inner membrane component CK627_13420 PF12911 N-terminal TM domain of oligopeptide transport permease C CK627_13425 PF00005 ABC transporter CK627_13425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CK627_13430 PF00005 ABC transporter CK627_13435 PF02492 CobW/HypB/UreG, nucleotide-binding domain CK627_13440 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CK627_13445 PF02769 AIR synthase related protein, C-terminal domain CK627_13445 PF00586 AIR synthase related protein, N-terminal domain CK627_13450 PF01924 Hydrogenase formation hypA family CK627_13455 PF01455 HupF/HypC family CK627_13460 PF01300 Telomere recombination CK627_13460 PF00708 Acylphosphatase CK627_13460 PF17788 HypF Kae1-like domain CK627_13460 PF07503 HypF finger CK627_13465 PF03144 Elongation factor Tu domain 2 CK627_13465 PF09105 Elongation factor SelB, winged helix CK627_13465 PF09106 Elongation factor SelB, winged helix CK627_13465 PF09107 Elongation factor SelB, winged helix CK627_13465 PF00009 Elongation factor Tu GTP binding domain CK627_13470 PF12390 Selenocysteine synthase N terminal CK627_13470 PF03841 L-seryl-tRNA selenium transferase CK627_13475 PF01750 Hydrogenase maturation protease CK627_13480 PF07450 Formate hydrogenlyase maturation protein HycH CK627_13485 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CK627_13490 PF12838 4Fe-4S dicluster domain CK627_13495 PF00374 Nickel-dependent hydrogenase CK627_13495 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CK627_13495 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CK627_13500 PF00146 NADH dehydrogenase CK627_13505 PF00361 Proton-conducting membrane transporter CK627_13510 PF00037 4Fe-4S binding domain CK627_13510 PF12798 4Fe-4S binding domain CK627_13515 PF02705 K+ potassium transporter CK627_13525 PF13247 4Fe-4S dicluster domain CK627_13525 PF12800 4Fe-4S binding domain CK627_13540 PF02954 Bacterial regulatory protein, Fis family CK627_13540 PF00158 Sigma-54 interaction domain CK627_13540 PF01590 GAF domain CK627_13545 PF02634 FdhD/NarQ family CK627_13550 PF13662 Toprim domain CK627_13550 PF02132 RecR protein CK627_13555 PF00183 Hsp90 protein CK627_13555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_13565 PF05191 Adenylate kinase, active site lid CK627_13570 PF00762 Ferrochelatase CK627_13580 PF00294 pfkB family carbohydrate kinase CK627_13595 PF00990 Diguanylate cyclase, GGDEF domain CK627_13595 PF03707 Bacterial signalling protein N terminal repeat CK627_13595 PF00563 EAL domain CK627_13600 PF00483 Nucleotidyl transferase CK627_13610 PF07273 Protein of unknown function (DUF1439) CK627_13615 PF00425 chorismate binding enzyme CK627_13620 PF00501 AMP-binding enzyme CK627_13620 PF13193 AMP-binding enzyme C-terminal domain CK627_13625 PF00550 Phosphopantetheine attachment site CK627_13625 PF00857 Isochorismatase family CK627_13630 PF00550 Phosphopantetheine attachment site CK627_13630 PF00975 Thioesterase domain CK627_13630 PF00501 AMP-binding enzyme CK627_13630 PF13193 AMP-binding enzyme C-terminal domain CK627_13630 PF00668 Condensation domain CK627_13640 PF00668 Condensation domain CK627_13640 PF13193 AMP-binding enzyme C-terminal domain CK627_13640 PF00501 AMP-binding enzyme CK627_13640 PF07993 Male sterility protein CK627_13640 PF00550 Phosphopantetheine attachment site CK627_13645 PF00668 Condensation domain CK627_13645 PF00550 Phosphopantetheine attachment site CK627_13645 PF00975 Thioesterase domain CK627_13645 PF13193 AMP-binding enzyme C-terminal domain CK627_13645 PF00501 AMP-binding enzyme CK627_13650 PF01497 Periplasmic binding protein CK627_13655 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CK627_13655 PF01648 4'-phosphopantetheinyl transferase superfamily CK627_13660 PF00005 ABC transporter CK627_13665 PF01032 FecCD transport family CK627_13670 PF01032 FecCD transport family CK627_13675 PF00593 TonB dependent receptor CK627_13675 PF07715 TonB-dependent Receptor Plug Domain CK627_13690 PF11143 Protein of unknown function (DUF2919) CK627_13695 PF01544 CorA-like Mg2+ transporter protein CK627_13705 PF01012 Electron transfer flavoprotein domain CK627_13710 PF01012 Electron transfer flavoprotein domain CK627_13710 PF00766 Electron transfer flavoprotein FAD-binding domain CK627_13715 PF00266 Aminotransferase class-V CK627_13720 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CK627_13725 PF00793 DAHP synthetase I family CK627_13730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_13730 PF00672 HAMP domain CK627_13735 PF04055 Radical SAM superfamily CK627_13740 PF13742 OB-fold nucleic acid binding domain CK627_13740 PF02601 Exonuclease VII, large subunit CK627_13745 PF00892 EamA-like transporter family CK627_13750 PF02472 Biopolymer transport protein ExbD/TolR CK627_13755 PF01618 MotA/TolQ/ExbB proton channel family CK627_13765 PF02705 K+ potassium transporter CK627_13770 PF00478 IMP dehydrogenase / GMP reductase domain CK627_13770 PF00571 CBS domain CK627_13775 PF00117 Glutamine amidotransferase class-I CK627_13775 PF02540 NAD synthase CK627_13775 PF00958 GMP synthase C terminal domain CK627_13780 PF13356 Arm DNA-binding domain CK627_13780 PF00589 Phage integrase family CK627_13785 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CK627_13830 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CK627_13830 PF02805 Metal binding domain of Ada CK627_13830 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CK627_13830 PF12833 Helix-turn-helix domain CK627_13845 PF05724 Thiopurine S-methyltransferase (TPMT) CK627_13850 PF05193 Peptidase M16 inactive domain CK627_13850 PF00675 Insulinase (Peptidase family M16) CK627_13855 PF00300 Histidine phosphatase superfamily (branch 1) CK627_13870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CK627_13875 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CK627_13880 PF00270 DEAD/DEAH box helicase CK627_13880 PF03461 TRCF domain CK627_13880 PF17757 UvrB interaction domain CK627_13880 PF00271 Helicase conserved C-terminal domain CK627_13880 PF02559 CarD-like/TRCF domain CK627_13890 PF02687 FtsX-like permease family CK627_13890 PF12704 MacB-like periplasmic core domain CK627_13895 PF00005 ABC transporter CK627_13900 PF02687 FtsX-like permease family CK627_13900 PF12704 MacB-like periplasmic core domain CK627_13920 PF05697 Bacterial trigger factor protein (TF) CK627_13920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CK627_13920 PF05698 Bacterial trigger factor protein (TF) C-terminus CK627_13925 PF00574 Clp protease CK627_13930 PF06689 ClpX C4-type zinc finger CK627_13930 PF10431 C-terminal, D2-small domain, of ClpB protein CK627_13930 PF07724 AAA domain (Cdc48 subfamily) CK627_13935 PF00004 ATPase family associated with various cellular activities (AAA) CK627_13935 PF05362 Lon protease (S16) C-terminal proteolytic domain CK627_13935 PF02190 ATP-dependent protease La (LON) substrate-binding domain CK627_13940 PF00216 Bacterial DNA-binding protein CK627_13950 PF12848 ABC transporter CK627_13950 PF00005 ABC transporter CK627_13955 PF00474 Sodium:solute symporter family CK627_13960 PF04341 Protein of unknown function, DUF485 CK627_13975 PF00378 Enoyl-CoA hydratase/isomerase CK627_13980 PF01235 Sodium:alanine symporter family CK627_13990 PF06167 Glucose-regulated metallo-peptidase M90 CK627_13995 PF01184 GPR1/FUN34/yaaH family CK627_14010 PF00376 MerR family regulatory protein CK627_14010 PF09278 MerR, DNA binding CK627_14015 PF00682 HMGL-like CK627_14020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CK627_14020 PF00364 Biotin-requiring enzyme CK627_14020 PF00289 Biotin carboxylase, N-terminal domain CK627_14020 PF02785 Biotin carboxylase C-terminal domain CK627_14025 PF00378 Enoyl-CoA hydratase/isomerase CK627_14030 PF01039 Carboxyl transferase domain CK627_14035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CK627_14035 PF02770 Acyl-CoA dehydrogenase, middle domain CK627_14035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CK627_14040 PF00171 Aldehyde dehydrogenase family CK627_14045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CK627_14045 PF02770 Acyl-CoA dehydrogenase, middle domain CK627_14045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CK627_14050 PF00378 Enoyl-CoA hydratase/isomerase CK627_14055 PF00378 Enoyl-CoA hydratase/isomerase CK627_14060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CK627_14060 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CK627_14070 PF13520 Amino acid permease CK627_14075 PF01925 Sulfite exporter TauE/SafE CK627_14085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_14085 PF03466 LysR substrate binding domain CK627_14090 PF12146 Serine aminopeptidase, S33 CK627_14095 PF00326 Prolyl oligopeptidase family CK627_14095 PF07676 WD40-like Beta Propeller Repeat CK627_14095 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CK627_14105 PF03466 LysR substrate binding domain CK627_14105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_14110 PF00248 Aldo/keto reductase family CK627_14115 PF12706 Beta-lactamase superfamily domain CK627_14120 PF00072 Response regulator receiver domain CK627_14120 PF01627 Hpt domain CK627_14120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_14120 PF00672 HAMP domain CK627_14120 PF00512 His Kinase A (phospho-acceptor) domain CK627_14120 PF17149 Periplasmic sensor domain found in signal transduction proteins CK627_14150 PF00211 Adenylate and Guanylate cyclase catalytic domain CK627_14150 PF00072 Response regulator receiver domain CK627_14155 PF00534 Glycosyl transferases group 1 CK627_14160 PF02397 Bacterial sugar transferase CK627_14170 PF13439 Glycosyltransferase Family 4 CK627_14170 PF00534 Glycosyl transferases group 1 CK627_14230 PF00534 Glycosyl transferases group 1 CK627_14235 PF00534 Glycosyl transferases group 1 CK627_14235 PF00862 Sucrose synthase CK627_14240 PF03466 LysR substrate binding domain CK627_14240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_14245 PF00232 Glycosyl hydrolase family 1 CK627_14250 PF01966 HD domain CK627_14260 PF03466 LysR substrate binding domain CK627_14260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_14265 PF01261 Xylose isomerase-like TIM barrel CK627_14270 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CK627_14270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CK627_14275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_14275 PF03466 LysR substrate binding domain CK627_14285 PF03279 Bacterial lipid A biosynthesis acyltransferase CK627_14290 PF03279 Bacterial lipid A biosynthesis acyltransferase CK627_14305 PF00990 Diguanylate cyclase, GGDEF domain CK627_14315 PF03104 DNA polymerase family B, exonuclease domain CK627_14315 PF00136 DNA polymerase family B CK627_14350 PF01554 MatE CK627_14355 PF06786 Uncharacterised protein family (UPF0253) CK627_14360 PF00677 Lumazine binding domain CK627_14370 PF13419 Haloacid dehalogenase-like hydrolase CK627_14375 PF01370 NAD dependent epimerase/dehydratase family CK627_14375 PF02222 ATP-grasp domain CK627_14380 PF00892 EamA-like transporter family CK627_14385 PF02525 Flavodoxin-like fold CK627_14410 PF13509 S1 domain CK627_14410 PF17783 CvfB-like winged helix domain CK627_14420 PF04269 Protein of unknown function, DUF440 CK627_14425 PF00912 Transglycosylase CK627_14430 PF04269 Protein of unknown function, DUF440 CK627_14435 PF03776 Septum formation topological specificity factor MinE CK627_14440 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CK627_14445 PF05209 Septum formation inhibitor MinC, N-terminal domain CK627_14445 PF03775 Septum formation inhibitor MinC, C-terminal domain CK627_14450 PF05166 YcgL domain CK627_14455 PF13406 Transglycosylase SLT domain CK627_14460 PF03313 Serine dehydratase alpha chain CK627_14460 PF03315 Serine dehydratase beta chain CK627_14470 PF03315 Serine dehydratase beta chain CK627_14470 PF03313 Serine dehydratase alpha chain CK627_14475 PF06865 Pyrimidine/purine nucleoside phosphorylase CK627_14480 PF00375 Sodium:dicarboxylate symporter family CK627_14485 PF00376 MerR family regulatory protein CK627_14485 PF09278 MerR, DNA binding CK627_14490 PF02803 Thiolase, C-terminal domain CK627_14490 PF00108 Thiolase, N-terminal domain CK627_14495 PF08668 HDOD domain CK627_14495 PF00563 EAL domain CK627_14500 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CK627_14505 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CK627_14515 PF08281 Sigma-70, region 4 CK627_14515 PF04542 Sigma-70 region 2 CK627_14540 PF01882 Protein of unknown function DUF58 CK627_14545 PF17863 AAA lid domain CK627_14545 PF07726 ATPase family associated with various cellular activities (AAA) CK627_14550 PF00108 Thiolase, N-terminal domain CK627_14550 PF02803 Thiolase, C-terminal domain CK627_14555 PF00378 Enoyl-CoA hydratase/isomerase CK627_14555 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CK627_14555 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CK627_14565 PF07152 YaeQ protein CK627_14585 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CK627_14585 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CK627_14590 PF00291 Pyridoxal-phosphate dependent enzyme CK627_14595 PF01546 Peptidase family M20/M25/M40 CK627_14595 PF07687 Peptidase dimerisation domain CK627_14600 PF01979 Amidohydrolase family CK627_14605 PF00696 Amino acid kinase family CK627_14610 PF00892 EamA-like transporter family CK627_14615 PF02625 XdhC and CoxI family CK627_14615 PF13478 XdhC Rossmann domain CK627_14625 PF12804 MobA-like NTP transferase domain CK627_14630 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CK627_14630 PF07992 Pyridine nucleotide-disulphide oxidoreductase CK627_14635 PF01979 Amidohydrolase family CK627_14640 PF00941 FAD binding domain in molybdopterin dehydrogenase CK627_14645 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CK627_14645 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CK627_14645 PF01799 [2Fe-2S] binding domain CK627_14650 PF00860 Permease family CK627_14655 PF01979 Amidohydrolase family CK627_14660 PF00860 Permease family CK627_14665 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CK627_14665 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CK627_14670 PF03450 CO dehydrogenase flavoprotein C-terminal domain CK627_14670 PF00941 FAD binding domain in molybdopterin dehydrogenase CK627_14675 PF00111 2Fe-2S iron-sulfur cluster binding domain CK627_14675 PF01799 [2Fe-2S] binding domain CK627_14685 PF05433 Glycine zipper 2TM domain CK627_14695 PF03606 C4-dicarboxylate anaerobic carrier CK627_14700 PF00501 AMP-binding enzyme CK627_14700 PF13193 AMP-binding enzyme C-terminal domain CK627_14705 PF08279 HTH domain CK627_14705 PF13280 WYL domain CK627_14715 PF01502 Phosphoribosyl-AMP cyclohydrolase CK627_14715 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CK627_14720 PF00977 Histidine biosynthesis protein CK627_14725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_14725 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CK627_14725 PF01627 Hpt domain CK627_14725 PF00512 His Kinase A (phospho-acceptor) domain CK627_14725 PF00672 HAMP domain CK627_14725 PF00072 Response regulator receiver domain CK627_14735 PF00072 Response regulator receiver domain CK627_14740 PF00977 Histidine biosynthesis protein CK627_14745 PF00117 Glutamine amidotransferase class-I CK627_14750 PF08645 Polynucleotide kinase 3 phosphatase CK627_14750 PF00475 Imidazoleglycerol-phosphate dehydratase CK627_14755 PF00155 Aminotransferase class I and II CK627_14760 PF00815 Histidinol dehydrogenase CK627_14765 PF01634 ATP phosphoribosyltransferase CK627_14765 PF08029 HisG, C-terminal domain CK627_14775 PF13307 Helicase C-terminal domain CK627_14775 PF04851 Type III restriction enzyme, res subunit CK627_14780 PF00814 Glycoprotease family CK627_14790 PF12697 Alpha/beta hydrolase family CK627_14795 PF00501 AMP-binding enzyme CK627_14795 PF13193 AMP-binding enzyme C-terminal domain CK627_14800 PF00570 HRDC domain CK627_14800 PF01612 3'-5' exonuclease CK627_14805 PF00497 Bacterial extracellular solute-binding proteins, family 3 CK627_14815 PF01207 Dihydrouridine synthase (Dus) CK627_14820 PF04304 Protein of unknown function (DUF454) CK627_14825 PF00156 Phosphoribosyl transferase domain CK627_14830 PF12170 DNA polymerase III tau subunit V interacting with alpha CK627_14830 PF12169 DNA polymerase III subunits gamma and tau domain III CK627_14830 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CK627_14835 PF02575 YbaB/EbfC DNA-binding family CK627_14840 PF00141 Peroxidase CK627_14855 PF00196 Bacterial regulatory proteins, luxR family CK627_14855 PF00072 Response regulator receiver domain CK627_14865 PF00270 DEAD/DEAH box helicase CK627_14865 PF00271 Helicase conserved C-terminal domain CK627_14865 PF11898 Domain of unknown function (DUF3418) CK627_14865 PF04408 Helicase associated domain (HA2) CK627_14865 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CK627_14875 PF01386 Ribosomal L25p family CK627_14880 PF00512 His Kinase A (phospho-acceptor) domain CK627_14880 PF00072 Response regulator receiver domain CK627_14880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_14880 PF00672 HAMP domain CK627_14880 PF01627 Hpt domain CK627_14880 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CK627_14885 PF00072 Response regulator receiver domain CK627_14890 PF00753 Metallo-beta-lactamase superfamily CK627_14900 PF00586 AIR synthase related protein, N-terminal domain CK627_14900 PF02769 AIR synthase related protein, C-terminal domain CK627_14915 PF10672 S-adenosylmethionine-dependent methyltransferase CK627_14915 PF17785 PUA-like domain CK627_14920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_14920 PF00672 HAMP domain CK627_14920 PF12729 Four helix bundle sensory module for signal transduction CK627_14925 PF00708 Acylphosphatase CK627_14930 PF00043 Glutathione S-transferase, C-terminal domain CK627_14930 PF02798 Glutathione S-transferase, N-terminal domain CK627_14935 PF09334 tRNA synthetases class I (M) CK627_14935 PF08264 Anticodon-binding domain of tRNA CK627_14935 PF01588 Putative tRNA binding domain CK627_14940 PF10609 NUBPL iron-transfer P-loop NTPase CK627_14945 PF00485 Phosphoribulokinase / Uridine kinase family CK627_14950 PF00692 dUTPase CK627_14955 PF01384 Phosphate transporter family CK627_14960 PF00575 S1 RNA binding domain CK627_14960 PF10150 Ribonuclease E/G family CK627_14960 PF12111 Polyribonucleotide phosphorylase C terminal CK627_14965 PF00849 RNA pseudouridylate synthase CK627_14965 PF01479 S4 domain CK627_14970 PF13419 Haloacid dehalogenase-like hydrolase CK627_14975 PF02545 Maf-like protein CK627_14980 PF07690 Major Facilitator Superfamily CK627_14985 PF03466 LysR substrate binding domain CK627_14985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_14995 PF02620 Large ribosomal RNA subunit accumulation protein YceD CK627_15000 PF01783 Ribosomal L32p protein family CK627_15005 PF02504 Fatty acid synthesis protein CK627_15010 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CK627_15010 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CK627_15015 PF00698 Acyl transferase domain CK627_15025 PF00550 Phosphopantetheine attachment site CK627_15030 PF02801 Beta-ketoacyl synthase, C-terminal domain CK627_15030 PF00109 Beta-ketoacyl synthase, N-terminal domain CK627_15035 PF01063 Amino-transferase class IV CK627_15040 PF02618 YceG-like family CK627_15045 PF02223 Thymidylate kinase CK627_15050 PF09115 DNA polymerase III, delta subunit, C terminal CK627_15055 PF01026 TatD related DNase CK627_15060 PF00589 Phage integrase family CK627_15070 PF01189 16S rRNA methyltransferase RsmB/F CK627_15070 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CK627_15070 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CK627_15075 PF02470 MlaD protein CK627_15080 PF04403 Paraquat-inducible protein A CK627_15095 PF00285 Citrate synthase, C-terminal domain CK627_15100 PF03972 MmgE/PrpD family CK627_15115 PF06974 Protein of unknown function (DUF1298) CK627_15115 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CK627_15140 PF00106 short chain dehydrogenase CK627_15150 PF07130 YebG protein CK627_15230 PF05707 Zonular occludens toxin (Zot) CK627_15235 PF10734 Protein of unknown function (DUF2523) CK627_15270 PF05362 Lon protease (S16) C-terminal proteolytic domain CK627_15270 PF13654 AAA domain CK627_15275 PF07977 FabA-like domain CK627_15280 PF04957 Ribosome modulation factor CK627_15290 PF12848 ABC transporter CK627_15290 PF16326 ABC transporter C-terminal domain CK627_15290 PF00005 ABC transporter CK627_15300 PF01170 Putative RNA methylase family UPF0020 CK627_15300 PF02926 THUMP domain CK627_15300 PF10672 S-adenosylmethionine-dependent methyltransferase CK627_15305 PF07126 Cell-division protein ZapC CK627_15310 PF01180 Dihydroorotate dehydrogenase CK627_15315 PF05088 Bacterial NAD-glutamate dehydrogenase CK627_15325 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CK627_15325 PF11940 Domain of unknown function (DUF3458) Ig-like fold CK627_15325 PF01433 Peptidase family M1 domain CK627_15330 PF03572 Peptidase family S41 CK627_15330 PF00595 PDZ domain CK627_15330 PF17804 Tail specific protease N-terminal domain CK627_15330 PF11818 C-terminal domain of tail specific protease (DUF3340) CK627_15335 PF17516 ProQ C-terminal domain CK627_15335 PF04352 ProQ/FINO family CK627_15340 PF13185 GAF domain CK627_15350 PF00115 Cytochrome C and Quinol oxidase polypeptide I CK627_15365 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CK627_15365 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CK627_15375 PF00403 Heavy-metal-associated domain CK627_15390 PF00027 Cyclic nucleotide-binding domain CK627_15390 PF13545 Crp-like helix-turn-helix domain CK627_15395 PF00582 Universal stress protein family CK627_15400 PF01171 PP-loop family CK627_15415 PF13417 Glutathione S-transferase, N-terminal domain CK627_15420 PF05025 RbsD / FucU transport protein family CK627_15425 PF00005 ABC transporter CK627_15430 PF02653 Branched-chain amino acid transport system / permease component CK627_15435 PF13407 Periplasmic binding protein domain CK627_15440 PF00294 pfkB family carbohydrate kinase CK627_15445 PF00356 Bacterial regulatory proteins, lacI family CK627_15450 PF03707 Bacterial signalling protein N terminal repeat CK627_15450 PF00990 Diguanylate cyclase, GGDEF domain CK627_15450 PF00563 EAL domain CK627_15460 PF02146 Sir2 family CK627_15475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_15475 PF00512 His Kinase A (phospho-acceptor) domain CK627_15475 PF09456 RcsC Alpha-Beta-Loop (ABL) CK627_15475 PF00072 Response regulator receiver domain CK627_15480 PF00216 Bacterial DNA-binding protein CK627_15485 PF01588 Putative tRNA binding domain CK627_15485 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CK627_15485 PF03147 Ferredoxin-fold anticodon binding domain CK627_15485 PF03484 tRNA synthetase B5 domain CK627_15485 PF03483 B3/4 domain CK627_15490 PF01409 tRNA synthetases class II core domain (F) CK627_15490 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CK627_15495 PF00453 Ribosomal protein L20 CK627_15500 PF01632 Ribosomal protein L35 CK627_15505 PF05198 Translation initiation factor IF-3, N-terminal domain CK627_15505 PF00707 Translation initiation factor IF-3, C-terminal domain CK627_15510 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CK627_15510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CK627_15510 PF02824 TGS domain CK627_15510 PF03129 Anticodon binding domain CK627_15520 PF04055 Radical SAM superfamily CK627_15525 PF00521 DNA gyrase/topoisomerase IV, subunit A CK627_15525 PF03989 DNA gyrase C-terminal domain, beta-propeller CK627_15535 PF13419 Haloacid dehalogenase-like hydrolase CK627_15540 PF00317 Ribonucleotide reductase, all-alpha domain CK627_15540 PF03477 ATP cone domain CK627_15540 PF02867 Ribonucleotide reductase, barrel domain CK627_15545 PF00268 Ribonucleotide reductase, small chain CK627_15550 PF00111 2Fe-2S iron-sulfur cluster binding domain CK627_15555 PF06725 3D domain CK627_15555 PF03562 MltA specific insert domain CK627_15560 PF06945 Protein of unknown function (DUF1289) CK627_15565 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CK627_15565 PF02378 Phosphotransferase system, EIIC CK627_15570 PF00294 pfkB family carbohydrate kinase CK627_15575 PF00381 PTS HPr component phosphorylation site CK627_15575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CK627_15580 PF00356 Bacterial regulatory proteins, lacI family CK627_15580 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CK627_15585 PF03222 Tryptophan/tyrosine permease family CK627_15595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_15600 PF00270 DEAD/DEAH box helicase CK627_15600 PF00271 Helicase conserved C-terminal domain CK627_15610 PF01264 Chorismate synthase CK627_15615 PF05175 Methyltransferase small domain CK627_15620 PF01713 Smr domain CK627_15630 PF00990 Diguanylate cyclase, GGDEF domain CK627_15630 PF08448 PAS fold CK627_15635 PF00300 Histidine phosphatase superfamily (branch 1) CK627_15650 PF00704 Glycosyl hydrolases family 18 CK627_15650 PF08329 Chitinase A, N-terminal domain CK627_15660 PF03831 PhnA domain CK627_15660 PF08274 PhnA Zinc-Ribbon CK627_15680 PF02567 Phenazine biosynthesis-like protein CK627_15705 PF01327 Polypeptide deformylase CK627_15735 PF02567 Phenazine biosynthesis-like protein CK627_15745 PF01042 Endoribonuclease L-PSP CK627_15750 PF03330 Lytic transglycolase CK627_15755 PF04310 MukB N-terminal CK627_15755 PF16330 MukB hinge domain CK627_15760 PF04288 MukE-like family CK627_15765 PF17193 MukF C-terminal domain CK627_15765 PF17192 MukF middle domain CK627_15765 PF03882 MukF winged-helix domain CK627_15775 PF02698 DUF218 domain CK627_15780 PF00121 Triosephosphate isomerase CK627_15785 PF00365 Phosphofructokinase CK627_15790 PF07687 Peptidase dimerisation domain CK627_15790 PF01546 Peptidase family M20/M25/M40 CK627_15795 PF13419 Haloacid dehalogenase-like hydrolase CK627_15800 PF02789 Cytosol aminopeptidase family, N-terminal domain CK627_15800 PF00883 Cytosol aminopeptidase family, catalytic domain CK627_15845 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CK627_15845 PF00128 Alpha amylase, catalytic domain CK627_15855 PF11398 Protein of unknown function (DUF2813) CK627_15860 PF14525 AraC-binding-like domain CK627_15860 PF12833 Helix-turn-helix domain CK627_15870 PF03466 LysR substrate binding domain CK627_15870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_15875 PF01925 Sulfite exporter TauE/SafE CK627_15885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CK627_15885 PF18029 Glyoxalase-like domain CK627_15890 PF01820 D-ala D-ala ligase N-terminus CK627_15890 PF07478 D-ala D-ala ligase C-terminus CK627_15900 PF00255 Glutathione peroxidase CK627_15905 PF00271 Helicase conserved C-terminal domain CK627_15905 PF00270 DEAD/DEAH box helicase CK627_15910 PF13673 Acetyltransferase (GNAT) domain CK627_15925 PF01928 CYTH domain CK627_15935 PF00583 Acetyltransferase (GNAT) family CK627_15940 PF00465 Iron-containing alcohol dehydrogenase CK627_15945 PF03992 Antibiotic biosynthesis monooxygenase CK627_15950 PF08543 Phosphomethylpyrimidine kinase CK627_15970 PF00561 alpha/beta hydrolase fold CK627_15970 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CK627_15975 PF01575 MaoC like domain CK627_15995 PF00664 ABC transporter transmembrane region CK627_15995 PF00005 ABC transporter CK627_16005 PF00005 ABC transporter CK627_16005 PF00664 ABC transporter transmembrane region CK627_16010 PF00072 Response regulator receiver domain CK627_16010 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CK627_16010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_16010 PF00512 His Kinase A (phospho-acceptor) domain CK627_16010 PF01627 Hpt domain CK627_16010 PF00672 HAMP domain CK627_16015 PF00085 Thioredoxin CK627_16020 PF00939 Sodium:sulfate symporter transmembrane region CK627_16025 PF00343 Carbohydrate phosphorylase CK627_16050 PF00425 chorismate binding enzyme CK627_16050 PF04715 Anthranilate synthase component I, N terminal region CK627_16055 PF00293 NUDIX domain CK627_16060 PF03222 Tryptophan/tyrosine permease family CK627_16065 PF00375 Sodium:dicarboxylate symporter family CK627_16070 PF09382 RQC domain CK627_16070 PF16124 RecQ zinc-binding CK627_16070 PF00570 HRDC domain CK627_16070 PF00271 Helicase conserved C-terminal domain CK627_16070 PF00270 DEAD/DEAH box helicase CK627_16075 PF08298 PrkA AAA domain CK627_16075 PF06798 PrkA serine protein kinase C-terminal domain CK627_16080 PF04285 Protein of unknown function (DUF444) CK627_16085 PF04293 SpoVR like protein CK627_16090 PF07840 FadR C-terminal domain CK627_16090 PF00392 Bacterial regulatory proteins, gntR family CK627_16095 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CK627_16100 PF02600 Disulfide bond formation protein DsbB CK627_16105 PF09335 SNARE associated Golgi protein CK627_16115 PF12344 Ultra-violet resistance protein B CK627_16115 PF02151 UvrB/uvrC motif CK627_16115 PF04851 Type III restriction enzyme, res subunit CK627_16115 PF00271 Helicase conserved C-terminal domain CK627_16115 PF17757 UvrB interaction domain CK627_16130 PF06826 Predicted Permease Membrane Region CK627_16130 PF02080 TrkA-C domain CK627_16135 PF01551 Peptidase family M23 CK627_16135 PF10145 Phage-related minor tail protein CK627_16135 PF01464 Transglycosylase SLT domain CK627_16140 PF03401 Tripartite tricarboxylate transporter family receptor CK627_16150 PF01970 Tripartite tricarboxylate transporter TctA family CK627_16155 PF08279 HTH domain CK627_16155 PF12431 Transcriptional regulator CK627_16155 PF00072 Response regulator receiver domain CK627_16160 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CK627_16160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_16160 PF17203 Single cache domain 3 CK627_16160 PF00989 PAS fold CK627_16165 PF01047 MarR family CK627_16165 PF00480 ROK family CK627_16170 PF00672 HAMP domain CK627_16170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_16170 PF17200 Single Cache domain 2 CK627_16175 PF02810 SEC-C motif CK627_16180 PF01266 FAD dependent oxidoreductase CK627_16180 PF04324 BFD-like [2Fe-2S] binding domain CK627_16185 PF00890 FAD binding domain CK627_16190 PF02754 Cysteine-rich domain CK627_16190 PF13183 4Fe-4S dicluster domain CK627_16195 PF02335 Cytochrome c552 CK627_16200 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) CK627_16200 PF13435 Cytochrome c554 and c-prime CK627_16205 PF13247 4Fe-4S dicluster domain CK627_16205 PF00037 4Fe-4S binding domain CK627_16210 PF03916 Polysulphide reductase, NrfD CK627_16215 PF01578 Cytochrome C assembly protein CK627_16215 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CK627_16220 PF08534 Redoxin CK627_16225 PF03918 Cytochrome C biogenesis protein CK627_16235 PF00768 D-alanyl-D-alanine carboxypeptidase CK627_16240 PF01212 Beta-eliminating lyase CK627_16250 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CK627_16255 PF01266 FAD dependent oxidoreductase CK627_16260 PF00571 CBS domain CK627_16260 PF00478 IMP dehydrogenase / GMP reductase domain CK627_16270 PF01717 Cobalamin-independent synthase, Catalytic domain CK627_16270 PF08267 Cobalamin-independent synthase, N-terminal domain CK627_16275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_16275 PF03466 LysR substrate binding domain CK627_16285 PF00593 TonB dependent receptor CK627_16285 PF07715 TonB-dependent Receptor Plug Domain CK627_16290 PF12833 Helix-turn-helix domain CK627_16295 PF00106 short chain dehydrogenase CK627_16300 PF03466 LysR substrate binding domain CK627_16300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_16305 PF13460 NAD(P)H-binding CK627_16315 PF01053 Cys/Met metabolism PLP-dependent enzyme CK627_16320 PF05193 Peptidase M16 inactive domain CK627_16320 PF00675 Insulinase (Peptidase family M16) CK627_16325 PF02774 Semialdehyde dehydrogenase, dimerisation domain CK627_16325 PF01118 Semialdehyde dehydrogenase, NAD binding domain CK627_16330 PF00893 Small Multidrug Resistance protein CK627_16335 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CK627_16335 PF18381 YcaO cyclodehydratase C-terminal domain CK627_16340 PF01226 Formate/nitrite transporter CK627_16345 PF01228 Glycine radical CK627_16345 PF02901 Pyruvate formate lyase-like CK627_16355 PF00202 Aminotransferase class-III CK627_16360 PF00266 Aminotransferase class-V CK627_16365 PF07702 UTRA domain CK627_16365 PF00392 Bacterial regulatory proteins, gntR family CK627_16375 PF00005 ABC transporter CK627_16380 PF00528 Binding-protein-dependent transport system inner membrane component CK627_16385 PF01266 FAD dependent oxidoreductase CK627_16390 PF03692 Putative zinc- or iron-chelating domain CK627_16395 PF00549 CoA-ligase CK627_16395 PF02629 CoA binding domain CK627_16400 PF00549 CoA-ligase CK627_16400 PF08442 ATP-grasp domain CK627_16405 PF02817 e3 binding domain CK627_16405 PF00364 Biotin-requiring enzyme CK627_16405 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CK627_16410 PF02779 Transketolase, pyrimidine binding domain CK627_16410 PF16870 2-oxoglutarate dehydrogenase C-terminal CK627_16410 PF16078 2-oxoglutarate dehydrogenase N-terminus CK627_16410 PF00676 Dehydrogenase E1 component CK627_16415 PF13085 2Fe-2S iron-sulfur cluster binding domain CK627_16420 PF00890 FAD binding domain CK627_16420 PF02910 Fumarate reductase flavoprotein C-term CK627_16425 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CK627_16430 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CK627_16435 PF00285 Citrate synthase, C-terminal domain CK627_16450 PF02801 Beta-ketoacyl synthase, C-terminal domain CK627_16450 PF00109 Beta-ketoacyl synthase, N-terminal domain CK627_16455 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CK627_16455 PF01266 FAD dependent oxidoreductase CK627_16465 PF03606 C4-dicarboxylate anaerobic carrier CK627_16480 PF01863 Protein of unknown function DUF45 CK627_16495 PF01197 Ribosomal protein L31 CK627_16500 PF00444 Ribosomal protein L36 CK627_16505 PF02678 Pirin CK627_16505 PF05726 Pirin C-terminal cupin domain CK627_16510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_16510 PF03466 LysR substrate binding domain CK627_16515 PF08411 Exonuclease C-terminal CK627_16515 PF00929 Exonuclease CK627_16530 PF03788 LrgA family CK627_16535 PF04172 LrgB-like family CK627_16540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CK627_16540 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CK627_16545 PF00501 AMP-binding enzyme CK627_16550 PF08891 YfcL protein CK627_16560 PF03741 Integral membrane protein TerC family CK627_16565 PF00691 OmpA family CK627_16570 PF03707 Bacterial signalling protein N terminal repeat CK627_16570 PF00990 Diguanylate cyclase, GGDEF domain CK627_16570 PF00563 EAL domain CK627_16575 PF13689 YfiR/HmsC-like CK627_16580 PF18024 Helix-turn-helix domain CK627_16580 PF00158 Sigma-54 interaction domain CK627_16590 PF01329 Pterin 4 alpha carbinolamine dehydratase CK627_16595 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CK627_16600 PF05128 Domain of unknown function (DUF697) CK627_16605 PF04317 YcjX-like family, DUF463 CK627_16615 PF06667 Phage shock protein B CK627_16620 PF04012 PspA/IM30 family CK627_16625 PF00158 Sigma-54 interaction domain CK627_16625 PF02954 Bacterial regulatory protein, Fis family CK627_16630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CK627_16635 PF00528 Binding-protein-dependent transport system inner membrane component CK627_16640 PF12911 N-terminal TM domain of oligopeptide transport permease C CK627_16640 PF00528 Binding-protein-dependent transport system inner membrane component CK627_16645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CK627_16645 PF00005 ABC transporter CK627_16650 PF00005 ABC transporter CK627_16655 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CK627_16660 PF00156 Phosphoribosyl transferase domain CK627_16665 PF02674 Colicin V production protein CK627_16670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CK627_16670 PF02403 Seryl-tRNA synthetase N-terminal domain CK627_16675 PF12002 MgsA AAA+ ATPase C terminal CK627_16675 PF16193 AAA C-terminal domain CK627_16675 PF00004 ATPase family associated with various cellular activities (AAA) CK627_16680 PF03548 Outer membrane lipoprotein carrier protein LolA CK627_16685 PF01580 FtsK/SpoIIIE family CK627_16685 PF09397 Ftsk gamma domain CK627_16685 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CK627_16685 PF17854 FtsK alpha domain CK627_16690 PF01037 Lrp/AsnC ligand binding domain CK627_16695 PF07992 Pyridine nucleotide-disulphide oxidoreductase CK627_16700 PF00990 Diguanylate cyclase, GGDEF domain CK627_16700 PF17158 Membrane-associated sensor, integral membrane domain CK627_16705 PF05433 Glycine zipper 2TM domain CK627_16710 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CK627_16715 PF04377 Arginine-tRNA-protein transferase, C terminus CK627_16715 PF04376 Arginine-tRNA-protein transferase, N terminus CK627_16720 PF01176 Translation initiation factor 1A / IF-1 CK627_16725 PF17871 AAA lid domain CK627_16725 PF02861 Clp amino terminal domain, pathogenicity island component CK627_16725 PF10431 C-terminal, D2-small domain, of ClpB protein CK627_16725 PF00004 ATPase family associated with various cellular activities (AAA) CK627_16725 PF07724 AAA domain (Cdc48 subfamily) CK627_16730 PF02617 ATP-dependent Clp protease adaptor protein ClpS CK627_16735 PF00313 'Cold-shock' DNA-binding domain CK627_16740 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CK627_16740 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CK627_16765 PF04717 Type VI secretion system, phage-baseplate injector CK627_16800 PF10431 C-terminal, D2-small domain, of ClpB protein CK627_16800 PF00004 ATPase family associated with various cellular activities (AAA) CK627_16800 PF07724 AAA domain (Cdc48 subfamily) CK627_16800 PF17871 AAA lid domain CK627_16870 PF04717 Type VI secretion system, phage-baseplate injector CK627_16875 PF05638 Type VI secretion system effector, Hcp CK627_16890 PF10722 Putative bacterial sensory transduction regulator CK627_16900 PF00265 Thymidine kinase CK627_16905 PF03553 Na+/H+ antiporter family CK627_16910 PF00816 H-NS histone family CK627_16915 PF01923 Cobalamin adenosyltransferase CK627_16920 PF12843 Putative quorum-sensing-regulated virulence factor CK627_16925 PF04055 Radical SAM superfamily CK627_16930 PF06508 Queuosine biosynthesis protein QueC CK627_16945 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CK627_16950 PF18073 Rubredoxin metal binding domain CK627_16960 PF00216 Bacterial DNA-binding protein CK627_16965 PF00575 S1 RNA binding domain CK627_16970 PF02224 Cytidylate kinase CK627_16975 PF00925 GTP cyclohydrolase II CK627_16980 PF03466 LysR substrate binding domain CK627_16980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_16985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_16985 PF03466 LysR substrate binding domain CK627_16990 PF07690 Major Facilitator Superfamily CK627_17005 PF00881 Nitroreductase family CK627_17010 PF00563 EAL domain CK627_17010 PF00990 Diguanylate cyclase, GGDEF domain CK627_17010 PF03707 Bacterial signalling protein N terminal repeat CK627_17010 PF13188 PAS domain CK627_17020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_17020 PF03466 LysR substrate binding domain CK627_17025 PF00072 Response regulator receiver domain CK627_17035 PF01212 Beta-eliminating lyase CK627_17050 PF00248 Aldo/keto reductase family CK627_17055 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CK627_17065 PF03411 Penicillin-insensitive murein endopeptidase CK627_17075 PF04536 TPM domain CK627_17095 PF01618 MotA/TolQ/ExbB proton channel family CK627_17100 PF13677 Membrane MotB of proton-channel complex MotA/MotB CK627_17100 PF00691 OmpA family CK627_17105 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CK627_17110 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CK627_17115 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CK627_17115 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CK627_17125 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CK627_17125 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CK627_17130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CK627_17130 PF00384 Molybdopterin oxidoreductase CK627_17130 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CK627_17135 PF00146 NADH dehydrogenase CK627_17140 PF12838 4Fe-4S dicluster domain CK627_17145 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CK627_17150 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CK627_17155 PF00361 Proton-conducting membrane transporter CK627_17155 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CK627_17160 PF00361 Proton-conducting membrane transporter CK627_17165 PF00361 Proton-conducting membrane transporter CK627_17175 PF00072 Response regulator receiver domain CK627_17180 PF01966 HD domain CK627_17185 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CK627_17185 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CK627_17185 PF02769 AIR synthase related protein, C-terminal domain CK627_17190 PF01464 Transglycosylase SLT domain CK627_17190 PF00497 Bacterial extracellular solute-binding proteins, family 3 CK627_17200 PF07191 zinc-ribbons CK627_17205 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CK627_17205 PF01926 50S ribosome-binding GTPase CK627_17210 PF13360 PQQ-like domain CK627_17215 PF09976 Tetratricopeptide repeat-like domain CK627_17220 PF03129 Anticodon binding domain CK627_17220 PF13393 Histidyl-tRNA synthetase CK627_17225 PF04551 GcpE protein CK627_17230 PF13464 Domain of unknown function (DUF4115) CK627_17240 PF04055 Radical SAM superfamily CK627_17245 PF00334 Nucleoside diphosphate kinase CK627_17250 PF00883 Cytosol aminopeptidase family, catalytic domain CK627_17250 PF12404 Peptidase CK627_17255 PF00883 Cytosol aminopeptidase family, catalytic domain CK627_17255 PF12404 Peptidase CK627_17260 PF00111 2Fe-2S iron-sulfur cluster binding domain CK627_17265 PF00012 Hsp70 protein CK627_17270 PF07743 HSCB C-terminal oligomerisation domain CK627_17275 PF01521 Iron-sulphur cluster biosynthesis CK627_17280 PF01592 NifU-like N terminal domain CK627_17285 PF00266 Aminotransferase class-V CK627_17290 PF02082 Transcriptional regulator CK627_17295 PF00588 SpoU rRNA Methylase family CK627_17320 PF13181 Tetratricopeptide repeat CK627_17320 PF07719 Tetratricopeptide repeat CK627_17330 PF07549 SecD/SecF GG Motif CK627_17330 PF02355 Protein export membrane protein CK627_17335 PF13721 SecD export protein N-terminal TM region CK627_17335 PF02355 Protein export membrane protein CK627_17335 PF07549 SecD/SecF GG Motif CK627_17340 PF02699 Preprotein translocase subunit CK627_17345 PF01702 Queuine tRNA-ribosyltransferase CK627_17350 PF02547 Queuosine biosynthesis protein CK627_17355 PF00571 CBS domain CK627_17360 PF10417 C-terminal domain of 1-Cys peroxiredoxin CK627_17360 PF00578 AhpC/TSA family CK627_17365 PF07992 Pyridine nucleotide-disulphide oxidoreductase CK627_17365 PF13192 Thioredoxin domain CK627_17370 PF07690 Major Facilitator Superfamily CK627_17375 PF00989 PAS fold CK627_17375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_17375 PF00512 His Kinase A (phospho-acceptor) domain CK627_17385 PF08241 Methyltransferase domain CK627_17395 PF13186 Iron-sulfur cluster-binding domain CK627_17395 PF04055 Radical SAM superfamily CK627_17400 PF02347 Glycine cleavage system P-protein CK627_17405 PF01597 Glycine cleavage H-protein CK627_17410 PF08669 Glycine cleavage T-protein C-terminal barrel domain CK627_17410 PF01571 Aminomethyltransferase folate-binding domain CK627_17415 PF01494 FAD binding domain CK627_17420 PF01494 FAD binding domain CK627_17425 PF03695 Uncharacterised protein family (UPF0149) CK627_17430 PF05164 Cell division protein ZapA CK627_17440 PF07690 Major Facilitator Superfamily CK627_17445 PF00043 Glutathione S-transferase, C-terminal domain CK627_17445 PF02798 Glutathione S-transferase, N-terminal domain CK627_17455 PF00459 Inositol monophosphatase family CK627_17460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_17460 PF12729 Four helix bundle sensory module for signal transduction CK627_17460 PF00672 HAMP domain CK627_17465 PF02535 ZIP Zinc transporter CK627_17475 PF01048 Phosphorylase superfamily CK627_17485 PF01497 Periplasmic binding protein CK627_17490 PF02719 Polysaccharide biosynthesis protein CK627_17505 PF02561 Flagellar protein FliS CK627_17510 PF02465 Flagellar hook-associated protein 2 N-terminus CK627_17510 PF07195 Flagellar hook-associated protein 2 C-terminus CK627_17510 PF07196 Flagellin hook IN motif CK627_17520 PF00700 Bacterial flagellin C-terminal helical region CK627_17520 PF07196 Flagellin hook IN motif CK627_17520 PF00669 Bacterial flagellin N-terminal helical region CK627_17525 PF07196 Flagellin hook IN motif CK627_17525 PF00700 Bacterial flagellin C-terminal helical region CK627_17525 PF00669 Bacterial flagellin N-terminal helical region CK627_17530 PF03458 UPF0126 domain CK627_17540 PF02926 THUMP domain CK627_17540 PF02568 Thiamine biosynthesis protein (ThiI) CK627_17550 PF00912 Transglycosylase CK627_17550 PF00905 Penicillin binding protein transpeptidase domain CK627_17550 PF06832 Penicillin-Binding Protein C-terminus Family CK627_17555 PF17962 Bacterial macroglobulin domain 6 CK627_17555 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CK627_17555 PF01835 MG2 domain CK627_17555 PF07678 A-macroglobulin TED domain CK627_17555 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CK627_17555 PF00207 Alpha-2-macroglobulin family CK627_17555 PF07703 Alpha-2-macroglobulin bait region domain CK627_17555 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CK627_17555 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CK627_17560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CK627_17560 PF07992 Pyridine nucleotide-disulphide oxidoreductase CK627_17565 PF00563 EAL domain CK627_17565 PF03707 Bacterial signalling protein N terminal repeat CK627_17565 PF00990 Diguanylate cyclase, GGDEF domain CK627_17570 PF04055 Radical SAM superfamily CK627_17580 PF00528 Binding-protein-dependent transport system inner membrane component CK627_17585 PF00528 Binding-protein-dependent transport system inner membrane component CK627_17590 PF00497 Bacterial extracellular solute-binding proteins, family 3 CK627_17595 PF00005 ABC transporter CK627_17600 PF03956 Lysine exporter LysO CK627_17605 PF01979 Amidohydrolase family CK627_17610 PF04336 Acyl carrier protein phosphodiesterase CK627_17625 PF03960 ArsC family CK627_17630 PF00578 AhpC/TSA family CK627_17635 PF01435 Peptidase family M48 CK627_17635 PF13181 Tetratricopeptide repeat CK627_17640 PF01206 Sulfurtransferase TusA CK627_17645 PF01594 AI-2E family transporter CK627_17655 PF00561 alpha/beta hydrolase fold CK627_17660 PF03976 Polyphosphate kinase 2 (PPK2) CK627_17665 PF00005 ABC transporter CK627_17665 PF08402 TOBE domain CK627_17670 PF00528 Binding-protein-dependent transport system inner membrane component CK627_17675 PF14785 Maltose transport system permease protein MalF P2 domain CK627_17675 PF00528 Binding-protein-dependent transport system inner membrane component CK627_17680 PF01547 Bacterial extracellular solute-binding protein CK627_17685 PF04245 37-kD nucleoid-associated bacterial protein CK627_17690 PF07208 Protein of unknown function (DUF1414) CK627_17695 PF00884 Sulfatase CK627_17695 PF11893 Domain of unknown function (DUF3413) CK627_17700 PF07715 TonB-dependent Receptor Plug Domain CK627_17700 PF00593 TonB dependent receptor CK627_17705 PF00326 Prolyl oligopeptidase family CK627_17705 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CK627_17725 PF03974 Ecotin CK627_17730 PF04219 Protein of unknown function, DUF CK627_17735 PF03466 LysR substrate binding domain CK627_17735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_17740 PF02153 Prephenate dehydrogenase CK627_17740 PF01817 Chorismate mutase type II CK627_17745 PF00793 DAHP synthetase I family CK627_17750 PF03009 Glycerophosphoryl diester phosphodiesterase family CK627_17755 PF01266 FAD dependent oxidoreductase CK627_17755 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CK627_17760 PF08220 DeoR-like helix-turn-helix domain CK627_17760 PF00455 DeoR C terminal sensor domain CK627_17765 PF07690 Major Facilitator Superfamily CK627_17770 PF00230 Major intrinsic protein CK627_17775 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CK627_17775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CK627_17780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_17780 PF00672 HAMP domain CK627_17780 PF02743 Cache domain CK627_17790 PF03466 LysR substrate binding domain CK627_17790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_17810 PF00248 Aldo/keto reductase family CK627_17815 PF07690 Major Facilitator Superfamily CK627_17830 PF05114 Protein of unknown function (DUF692) CK627_17850 PF02322 Cytochrome bd terminal oxidase subunit II CK627_17855 PF01654 Cytochrome bd terminal oxidase subunit I CK627_17860 PF00392 Bacterial regulatory proteins, gntR family CK627_17860 PF00155 Aminotransferase class I and II CK627_17870 PF04391 Protein of unknown function (DUF533) CK627_17875 PF00892 EamA-like transporter family CK627_17890 PF10689 Protein of unknown function (DUF2496) CK627_17900 PF07690 Major Facilitator Superfamily CK627_17905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_17905 PF03466 LysR substrate binding domain CK627_17915 PF07690 Major Facilitator Superfamily CK627_17920 PF09102 Exotoxin A, targeting CK627_17920 PF09009 Exotoxin A catalytic CK627_17920 PF09101 Exotoxin A binding CK627_17925 PF00849 RNA pseudouridylate synthase CK627_17925 PF01479 S4 domain CK627_17940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CK627_17950 PF01844 HNH endonuclease CK627_17955 PF00300 Histidine phosphatase superfamily (branch 1) CK627_17960 PF08348 YheO-like PAS domain CK627_17960 PF13309 HTH domain CK627_17965 PF03313 Serine dehydratase alpha chain CK627_17970 PF01042 Endoribonuclease L-PSP CK627_17980 PF00672 HAMP domain CK627_17980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_17995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_17995 PF03466 LysR substrate binding domain CK627_18000 PF14864 Alkyl sulfatase C-terminal CK627_18000 PF14863 Alkyl sulfatase dimerisation CK627_18000 PF00753 Metallo-beta-lactamase superfamily CK627_18010 PF17944 Arginine decarboxylase C-terminal helical extension CK627_18010 PF17810 Arginine decarboxylase helical bundle domain CK627_18010 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CK627_18025 PF07687 Peptidase dimerisation domain CK627_18025 PF01546 Peptidase family M20/M25/M40 CK627_18050 PF04264 YceI-like domain CK627_18055 PF03466 LysR substrate binding domain CK627_18055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_18065 PF01268 Formate--tetrahydrofolate ligase CK627_18070 PF00672 HAMP domain CK627_18070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_18070 PF17200 Single Cache domain 2 CK627_18075 PF01227 GTP cyclohydrolase I CK627_18080 PF03454 MoeA C-terminal region (domain IV) CK627_18080 PF03453 MoeA N-terminal region (domain I and II) CK627_18080 PF00994 Probable molybdopterin binding domain CK627_18085 PF00899 ThiF family CK627_18090 PF00561 alpha/beta hydrolase fold CK627_18095 PF03459 TOBE domain CK627_18095 PF00005 ABC transporter CK627_18100 PF00528 Binding-protein-dependent transport system inner membrane component CK627_18110 PF02391 MoaE protein CK627_18115 PF02597 ThiS family CK627_18120 PF01967 MoaC family CK627_18125 PF00994 Probable molybdopterin binding domain CK627_18130 PF03264 NapC/NirT cytochrome c family, N-terminal region CK627_18135 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CK627_18140 PF13237 4Fe-4S dicluster domain CK627_18140 PF12801 4Fe-4S binding domain CK627_18145 PF12838 4Fe-4S dicluster domain CK627_18145 PF12800 4Fe-4S binding domain CK627_18150 PF00384 Molybdopterin oxidoreductase CK627_18150 PF10518 TAT (twin-arginine translocation) pathway signal sequence CK627_18150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CK627_18150 PF01568 Molydopterin dinucleotide binding domain CK627_18160 PF12800 4Fe-4S binding domain CK627_18160 PF13187 4Fe-4S dicluster domain CK627_18160 PF00037 4Fe-4S binding domain CK627_18165 PF06463 Molybdenum Cofactor Synthesis C CK627_18165 PF04055 Radical SAM superfamily CK627_18170 PF07730 Histidine kinase CK627_18170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_18170 PF00672 HAMP domain CK627_18170 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CK627_18175 PF00072 Response regulator receiver domain CK627_18175 PF00196 Bacterial regulatory proteins, luxR family CK627_18185 PF00072 Response regulator receiver domain CK627_18185 PF09456 RcsC Alpha-Beta-Loop (ABL) CK627_18185 PF00512 His Kinase A (phospho-acceptor) domain CK627_18185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_18195 PF01933 Uncharacterised protein family UPF0052 CK627_18205 PF13230 Glutamine amidotransferases class-II CK627_18210 PF13580 SIS domain CK627_18215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CK627_18215 PF02770 Acyl-CoA dehydrogenase, middle domain CK627_18215 PF09317 Domain of unknown function (DUF1974) CK627_18215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CK627_18220 PF11849 Domain of unknown function (DUF3369) CK627_18230 PF00929 Exonuclease CK627_18235 PF00075 RNase H CK627_18240 PF08241 Methyltransferase domain CK627_18245 PF00753 Metallo-beta-lactamase superfamily CK627_18245 PF16123 Hydroxyacylglutathione hydrolase C-terminus CK627_18250 PF01464 Transglycosylase SLT domain CK627_18250 PF01476 LysM domain CK627_18255 PF03372 Endonuclease/Exonuclease/phosphatase family CK627_18265 PF03061 Thioesterase superfamily CK627_18275 PF00356 Bacterial regulatory proteins, lacI family CK627_18280 PF14718 Soluble lytic murein transglycosylase L domain CK627_18280 PF01464 Transglycosylase SLT domain CK627_18285 PF03707 Bacterial signalling protein N terminal repeat CK627_18285 PF00990 Diguanylate cyclase, GGDEF domain CK627_18285 PF00563 EAL domain CK627_18290 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CK627_18310 PF04357 TamB, inner membrane protein subunit of TAM complex CK627_18315 PF01103 Surface antigen CK627_18315 PF17243 POTRA domain TamA domain 1 CK627_18315 PF07244 Surface antigen variable number repeat CK627_18330 PF01625 Peptide methionine sulfoxide reductase CK627_18340 PF02627 Carboxymuconolactone decarboxylase family CK627_18345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CK627_18345 PF00403 Heavy-metal-associated domain CK627_18345 PF07992 Pyridine nucleotide-disulphide oxidoreductase CK627_18350 PF13416 Bacterial extracellular solute-binding protein CK627_18360 PF00005 ABC transporter CK627_18365 PF01066 CDP-alcohol phosphatidyltransferase CK627_18370 PF13406 Transglycosylase SLT domain CK627_18385 PF01047 MarR family CK627_18395 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CK627_18395 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CK627_18395 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CK627_18395 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CK627_18400 PF03925 SeqA protein C-terminal domain CK627_18400 PF17206 SeqA protein N-terminal domain CK627_18405 PF12697 Alpha/beta hydrolase family CK627_18415 PF01402 Ribbon-helix-helix protein, copG family CK627_18420 PF00258 Flavodoxin CK627_18430 PF01475 Ferric uptake regulator family CK627_18435 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CK627_18435 PF00749 tRNA synthetases class I (E and Q), catalytic domain CK627_18440 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain CK627_18440 PF02838 Glycosyl hydrolase family 20, domain 2 CK627_18440 PF03173 Putative carbohydrate binding domain CK627_18440 PF00728 Glycosyl hydrolase family 20, catalytic domain CK627_18445 PF00367 phosphotransferase system, EIIB CK627_18445 PF02378 Phosphotransferase system, EIIC CK627_18445 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CK627_18450 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CK627_18455 PF01979 Amidohydrolase family CK627_18460 PF01047 MarR family CK627_18460 PF00480 ROK family CK627_18465 PF00884 Sulfatase CK627_18465 PF08019 Phosphoethanolamine transferase EptA/EptB CK627_18470 PF01709 Transcriptional regulator CK627_18475 PF00152 tRNA synthetases class II (D, K and N) CK627_18475 PF02938 GAD domain CK627_18475 PF01336 OB-fold nucleic acid binding domain CK627_18485 PF01904 Protein of unknown function DUF72 CK627_18490 PF13649 Methyltransferase domain CK627_18495 PF08003 Protein of unknown function (DUF1698) CK627_18515 PF10417 C-terminal domain of 1-Cys peroxiredoxin CK627_18515 PF00578 AhpC/TSA family CK627_18520 PF03466 LysR substrate binding domain CK627_18520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_18525 PF12563 Hemolytic toxin N terminal CK627_18525 PF07968 Leukocidin/Hemolysin toxin family CK627_18530 PF00877 NlpC/P60 family CK627_18540 PF00171 Aldehyde dehydrogenase family CK627_18545 PF00440 Bacterial regulatory proteins, tetR family CK627_18545 PF08359 YsiA-like protein, C-terminal region CK627_18555 PF00465 Iron-containing alcohol dehydrogenase CK627_18565 PF00291 Pyridoxal-phosphate dependent enzyme CK627_18585 PF01554 MatE CK627_18595 PF04325 Protein of unknown function (DUF465) CK627_18600 PF12833 Helix-turn-helix domain CK627_18600 PF02311 AraC-like ligand binding domain CK627_18605 PF01804 Penicillin amidase CK627_18610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CK627_18610 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CK627_18610 PF10371 Domain of unknown function CK627_18610 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CK627_18610 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CK627_18615 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CK627_18615 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CK627_18615 PF07992 Pyridine nucleotide-disulphide oxidoreductase CK627_18620 PF03476 MOSC N-terminal beta barrel domain CK627_18620 PF03473 MOSC domain CK627_18620 PF03476 MOSC N-terminal beta barrel domain CK627_18620 PF00111 2Fe-2S iron-sulfur cluster binding domain CK627_18620 PF03473 MOSC domain CK627_18620 PF00111 2Fe-2S iron-sulfur cluster binding domain CK627_18625 PF13426 PAS domain CK627_18625 PF08447 PAS fold CK627_18625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_18630 PF01435 Peptidase family M48 CK627_18640 PF12697 Alpha/beta hydrolase family CK627_18640 PF08241 Methyltransferase domain CK627_18645 PF00155 Aminotransferase class I and II CK627_18650 PF04055 Radical SAM superfamily CK627_18650 PF06968 Biotin and Thiamin Synthesis associated domain CK627_18670 PF01336 OB-fold nucleic acid binding domain CK627_18670 PF00152 tRNA synthetases class II (D, K and N) CK627_18675 PF03605 Anaerobic c4-dicarboxylate membrane transporter CK627_18685 PF01546 Peptidase family M20/M25/M40 CK627_18685 PF07687 Peptidase dimerisation domain CK627_18690 PF03606 C4-dicarboxylate anaerobic carrier CK627_18700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_18700 PF03466 LysR substrate binding domain CK627_18705 PF03960 ArsC family CK627_18710 PF01546 Peptidase family M20/M25/M40 CK627_18710 PF07687 Peptidase dimerisation domain CK627_18715 PF02557 D-alanyl-D-alanine carboxypeptidase CK627_18725 PF02080 TrkA-C domain CK627_18725 PF00999 Sodium/hydrogen exchanger family CK627_18725 PF03471 Transporter associated domain CK627_18735 PF02080 TrkA-C domain CK627_18735 PF03471 Transporter associated domain CK627_18735 PF00999 Sodium/hydrogen exchanger family CK627_18745 PF01810 LysE type translocator CK627_18750 PF12729 Four helix bundle sensory module for signal transduction CK627_18750 PF00672 HAMP domain CK627_18750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_18755 PF07509 Protein of unknown function (DUF1523) CK627_18770 PF01156 Inosine-uridine preferring nucleoside hydrolase CK627_18775 PF00849 RNA pseudouridylate synthase CK627_18780 PF01048 Phosphorylase superfamily CK627_18785 PF00465 Iron-containing alcohol dehydrogenase CK627_18790 PF04355 SmpA / OmlA family CK627_18795 PF13460 NAD(P)H-binding CK627_18800 PF03658 RnfH family Ubiquitin CK627_18805 PF03364 Polyketide cyclase / dehydrase and lipid transport CK627_18810 PF01668 SmpB protein CK627_18905 PF00350 Dynamin family CK627_18915 PF00350 Dynamin family CK627_18920 PF00350 Dynamin family CK627_18940 PF00083 Sugar (and other) transporter CK627_18945 PF13181 Tetratricopeptide repeat CK627_18945 PF17128 Domain of unknown function (DUF5107) CK627_18950 PF00480 ROK family CK627_18955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_18955 PF03466 LysR substrate binding domain CK627_18960 PF00291 Pyridoxal-phosphate dependent enzyme CK627_18970 PF00180 Isocitrate/isopropylmalate dehydrogenase CK627_18975 PF12833 Helix-turn-helix domain CK627_18980 PF01238 Phosphomannose isomerase type I CK627_19005 PF00155 Aminotransferase class I and II CK627_19010 PF00367 phosphotransferase system, EIIB CK627_19010 PF02378 Phosphotransferase system, EIIC CK627_19015 PF00356 Bacterial regulatory proteins, lacI family CK627_19015 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CK627_19020 PF07992 Pyridine nucleotide-disulphide oxidoreductase CK627_19020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CK627_19025 PF13411 MerR HTH family regulatory protein CK627_19035 PF00583 Acetyltransferase (GNAT) family CK627_19050 PF02378 Phosphotransferase system, EIIC CK627_19050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CK627_19050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CK627_19055 PF07690 Major Facilitator Superfamily CK627_19060 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CK627_19070 PF00849 RNA pseudouridylate synthase CK627_19075 PF00293 NUDIX domain CK627_19085 PF04356 Protein of unknown function (DUF489) CK627_19090 PF08328 Adenylosuccinate lyase C-terminal CK627_19090 PF00206 Lyase CK627_19095 PF08007 Cupin superfamily protein CK627_19105 PF13508 Acetyltransferase (GNAT) domain CK627_19115 PF02798 Glutathione S-transferase, N-terminal domain CK627_19120 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CK627_19120 PF01243 Pyridoxamine 5'-phosphate oxidase CK627_19135 PF01189 16S rRNA methyltransferase RsmB/F CK627_19135 PF01029 NusB family CK627_19140 PF00462 Glutaredoxin CK627_19145 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CK627_19145 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CK627_19150 PF04333 MlaA lipoprotein CK627_19160 PF03918 Cytochrome C biogenesis protein CK627_19165 PF08534 Redoxin CK627_19170 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CK627_19170 PF01578 Cytochrome C assembly protein CK627_19175 PF03100 CcmE CK627_19180 PF04995 Heme exporter protein D (CcmD) CK627_19185 PF01578 Cytochrome C assembly protein CK627_19190 PF03379 CcmB protein CK627_19195 PF00005 ABC transporter CK627_19205 PF01584 CheW-like domain CK627_19215 PF13614 AAA domain CK627_19220 PF13677 Membrane MotB of proton-channel complex MotA/MotB CK627_19220 PF00691 OmpA family CK627_19225 PF01618 MotA/TolQ/ExbB proton channel family CK627_19230 PF00072 Response regulator receiver domain CK627_19230 PF01339 CheB methylesterase CK627_19235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_19235 PF01584 CheW-like domain CK627_19235 PF01627 Hpt domain CK627_19235 PF02895 Signal transducing histidine kinase, homodimeric domain CK627_19235 PF07194 P2 response regulator binding domain CK627_19240 PF04344 Chemotaxis phosphatase, CheZ CK627_19245 PF00072 Response regulator receiver domain CK627_19250 PF04542 Sigma-70 region 2 CK627_19250 PF04539 Sigma-70 region 3 CK627_19250 PF04545 Sigma-70, region 4 CK627_19255 PF10609 NUBPL iron-transfer P-loop NTPase CK627_19260 PF00448 SRP54-type protein, GTPase domain CK627_19265 PF00771 FHIPEP family CK627_19270 PF01312 FlhB HrpN YscU SpaS Family CK627_19275 PF01311 Bacterial export proteins, family 1 CK627_19280 PF01313 Bacterial export proteins, family 3 CK627_19285 PF00813 FliP family CK627_19290 PF04347 Flagellar biosynthesis protein, FliO CK627_19295 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CK627_19300 PF02154 Flagellar motor switch protein FliM CK627_19300 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CK627_19320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CK627_19320 PF18269 T3SS EscN ATPase C-terminal domain CK627_19330 PF14841 FliG middle domain CK627_19330 PF14842 FliG N-terminal domain CK627_19330 PF01706 FliG C-terminal domain CK627_19335 PF08345 Flagellar M-ring protein C-terminal CK627_19335 PF01514 Secretory protein of YscJ/FliF family CK627_19340 PF02049 Flagellar hook-basal body complex protein FliE CK627_19355 PF03960 ArsC family CK627_19360 PF01758 Sodium Bile acid symporter family CK627_19365 PF02374 Anion-transporting ATPase CK627_19370 PF06953 Arsenical resistance operon trans-acting repressor ArsD CK627_19375 PF01022 Bacterial regulatory protein, arsR family CK627_19380 PF02001 Protein of unknown function DUF134 CK627_19395 PF00072 Response regulator receiver domain CK627_19400 PF04055 Radical SAM superfamily CK627_19400 PF00919 Uncharacterized protein family UPF0004 CK627_19400 PF18693 TRAM domain CK627_19405 PF16671 Actin cross-linking domain CK627_19405 PF11647 Membrane Localization Domain CK627_19405 PF11713 Peptidase C80 family CK627_19405 PF12146 Serine aminopeptidase, S33 CK627_19405 PF07634 RtxA repeat CK627_19410 PF02794 RTX toxin acyltransferase family CK627_19420 PF00005 ABC transporter CK627_19420 PF03412 Peptidase C39 family CK627_19420 PF00664 ABC transporter transmembrane region CK627_19430 PF00664 ABC transporter transmembrane region CK627_19430 PF00005 ABC transporter CK627_19430 PF03412 Peptidase C39 family CK627_19435 PF00072 Response regulator receiver domain CK627_19435 PF00486 Transcriptional regulatory protein, C terminal CK627_19445 PF02685 Glucokinase CK627_19450 PF01418 Helix-turn-helix domain, rpiR family CK627_19450 PF01380 SIS domain CK627_19455 PF02887 Pyruvate kinase, alpha/beta domain CK627_19455 PF00224 Pyruvate kinase, barrel domain CK627_19465 PF00873 AcrB/AcrD/AcrF family CK627_19470 PF02770 Acyl-CoA dehydrogenase, middle domain CK627_19470 PF09317 Domain of unknown function (DUF1974) CK627_19470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CK627_19470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CK627_19475 PF00440 Bacterial regulatory proteins, tetR family CK627_19490 PF00384 Molybdopterin oxidoreductase CK627_19495 PF02634 FdhD/NarQ family CK627_19500 PF03466 LysR substrate binding domain CK627_19500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_19520 PF00512 His Kinase A (phospho-acceptor) domain CK627_19520 PF13426 PAS domain CK627_19520 PF00672 HAMP domain CK627_19520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_19525 PF00486 Transcriptional regulatory protein, C terminal CK627_19525 PF00072 Response regulator receiver domain CK627_19530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CK627_19530 PF00529 HlyD membrane-fusion protein of T1SS CK627_19535 PF00873 AcrB/AcrD/AcrF family CK627_19555 PF01476 LysM domain CK627_19555 PF17969 L,D-transpeptidase C-terminal domain CK627_19555 PF03734 L,D-transpeptidase catalytic domain CK627_19570 PF05971 RNA methyltransferase CK627_19575 PF00877 NlpC/P60 family CK627_19580 PF01648 4'-phosphopantetheinyl transferase superfamily CK627_19585 PF00085 Thioredoxin CK627_19595 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CK627_19600 PF01842 ACT domain CK627_19600 PF00551 Formyl transferase CK627_19610 PF13091 PLD-like domain CK627_19610 PF13396 Phospholipase_D-nuclease N-terminal CK627_19625 PF01551 Peptidase family M23 CK627_19630 PF00128 Alpha amylase, catalytic domain CK627_19635 PF01551 Peptidase family M23 CK627_19635 PF10145 Phage-related minor tail protein CK627_19635 PF01464 Transglycosylase SLT domain CK627_19640 PF00230 Major intrinsic protein CK627_19645 PF02075 Crossover junction endodeoxyribonuclease RuvC CK627_19650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CK627_19680 PF05656 Protein of unknown function (DUF805) CK627_19685 PF12833 Helix-turn-helix domain CK627_19695 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CK627_19700 PF11842 Domain of unknown function (DUF3362) CK627_19700 PF04055 Radical SAM superfamily CK627_19700 PF08497 Radical SAM N-terminal CK627_19710 PF00873 AcrB/AcrD/AcrF family CK627_19715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CK627_19715 PF00529 HlyD membrane-fusion protein of T1SS CK627_19720 PF17158 Membrane-associated sensor, integral membrane domain CK627_19720 PF00990 Diguanylate cyclase, GGDEF domain CK627_19725 PF01734 Patatin-like phospholipase CK627_19730 PF00209 Sodium:neurotransmitter symporter family CK627_19745 PF01389 OmpA-like transmembrane domain CK627_19745 PF00691 OmpA family CK627_19750 PF00691 OmpA family CK627_19750 PF01389 OmpA-like transmembrane domain CK627_19755 PF01389 OmpA-like transmembrane domain CK627_19755 PF00691 OmpA family CK627_19760 PF03949 Malic enzyme, NAD binding domain CK627_19760 PF00390 Malic enzyme, N-terminal domain CK627_19765 PF12833 Helix-turn-helix domain CK627_19765 PF06719 AraC-type transcriptional regulator N-terminus CK627_19770 PF01554 MatE CK627_19775 PF10692 Protein of unknown function (DUF2498) CK627_19780 PF00990 Diguanylate cyclase, GGDEF domain CK627_19780 PF00072 Response regulator receiver domain CK627_19785 PF00860 Permease family CK627_19795 PF01235 Sodium:alanine symporter family CK627_19800 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CK627_19800 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CK627_19805 PF01699 Sodium/calcium exchanger protein CK627_19810 PF08534 Redoxin CK627_19810 PF00462 Glutaredoxin CK627_19820 PF00293 NUDIX domain CK627_19830 PF00005 ABC transporter CK627_19835 PF00528 Binding-protein-dependent transport system inner membrane component CK627_19840 PF00528 Binding-protein-dependent transport system inner membrane component CK627_19845 PF00497 Bacterial extracellular solute-binding proteins, family 3 CK627_19860 PF00005 ABC transporter CK627_19865 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CK627_19865 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CK627_19875 PF03932 CutC family CK627_19880 PF00480 ROK family CK627_19890 PF01435 Peptidase family M48 CK627_19895 PF12849 PBP superfamily domain CK627_19900 PF11808 Phosphate regulon sensor protein PhoR CK627_19900 PF00512 His Kinase A (phospho-acceptor) domain CK627_19900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_19900 PF00989 PAS fold CK627_19905 PF00072 Response regulator receiver domain CK627_19905 PF00486 Transcriptional regulatory protein, C terminal CK627_19910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CK627_19915 PF02515 CoA-transferase family III CK627_19920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CK627_19920 PF02770 Acyl-CoA dehydrogenase, middle domain CK627_19920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CK627_19925 PF02954 Bacterial regulatory protein, Fis family CK627_19925 PF00158 Sigma-54 interaction domain CK627_19925 PF01590 GAF domain CK627_19930 PF00171 Aldehyde dehydrogenase family CK627_19940 PF00892 EamA-like transporter family CK627_19945 PF12431 Transcriptional regulator CK627_19945 PF00072 Response regulator receiver domain CK627_19950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_19950 PF17203 Single cache domain 3 CK627_19950 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CK627_19950 PF00989 PAS fold CK627_19955 PF00390 Malic enzyme, N-terminal domain CK627_19955 PF03949 Malic enzyme, NAD binding domain CK627_19960 PF03390 2-hydroxycarboxylate transporter family CK627_19970 PF01047 MarR family CK627_19975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CK627_19975 PF00529 HlyD membrane-fusion protein of T1SS CK627_20000 PF01679 Proteolipid membrane potential modulator CK627_20010 PF13597 Anaerobic ribonucleoside-triphosphate reductase CK627_20010 PF03477 ATP cone domain CK627_20020 PF00533 BRCA1 C Terminus (BRCT) domain CK627_20020 PF01653 NAD-dependent DNA ligase adenylation domain CK627_20020 PF12826 Helix-hairpin-helix motif CK627_20020 PF03120 NAD-dependent DNA ligase OB-fold domain CK627_20020 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CK627_20025 PF04354 ZipA, C-terminal FtsZ-binding domain CK627_20030 PF06470 SMC proteins Flexible Hinge Domain CK627_20030 PF02463 RecF/RecN/SMC N terminal domain CK627_20040 PF03458 UPF0126 domain CK627_20050 PF05951 Bacterial protein of unknown function (DUF882) CK627_20055 PF01471 Putative peptidoglycan binding domain CK627_20055 PF03734 L,D-transpeptidase catalytic domain CK627_20070 PF00535 Glycosyl transferase family 2 CK627_20085 PF00128 Alpha amylase, catalytic domain CK627_20095 PF00196 Bacterial regulatory proteins, luxR family CK627_20095 PF00072 Response regulator receiver domain CK627_20115 PF02254 TrkA-N domain CK627_20115 PF00999 Sodium/hydrogen exchanger family CK627_20115 PF02080 TrkA-C domain CK627_20120 PF00990 Diguanylate cyclase, GGDEF domain CK627_20125 PF09179 TilS substrate binding domain CK627_20125 PF01171 PP-loop family CK627_20125 PF11734 TilS substrate C-terminal domain CK627_20130 PF05649 Peptidase family M13 CK627_20130 PF01431 Peptidase family M13 CK627_20140 PF12848 ABC transporter CK627_20140 PF00005 ABC transporter CK627_20140 PF16326 ABC transporter C-terminal domain CK627_20145 PF13302 Acetyltransferase (GNAT) domain CK627_20150 PF13520 Amino acid permease CK627_20160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_20160 PF03466 LysR substrate binding domain CK627_20170 PF08543 Phosphomethylpyrimidine kinase CK627_20175 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CK627_20175 PF01276 Orn/Lys/Arg decarboxylase, major domain CK627_20175 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CK627_20180 PF13520 Amino acid permease CK627_20185 PF00486 Transcriptional regulatory protein, C terminal CK627_20185 PF18500 CadC C-terminal domain 1 CK627_20190 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CK627_20195 PF07733 Bacterial DNA polymerase III alpha NTPase domain CK627_20195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CK627_20195 PF14579 Helix-hairpin-helix motif CK627_20195 PF01336 OB-fold nucleic acid binding domain CK627_20195 PF02811 PHP domain CK627_20200 PF01351 Ribonuclease HII CK627_20205 PF02684 Lipid-A-disaccharide synthetase CK627_20210 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CK627_20210 PF00132 Bacterial transferase hexapeptide (six repeats) CK627_20215 PF07977 FabA-like domain CK627_20220 PF00132 Bacterial transferase hexapeptide (six repeats) CK627_20220 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CK627_20225 PF03938 Outer membrane protein (OmpH-like) CK627_20230 PF07244 Surface antigen variable number repeat CK627_20230 PF01103 Surface antigen CK627_20235 PF17820 PDZ domain CK627_20235 PF02163 Peptidase family M50 CK627_20240 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CK627_20240 PF13288 DXP reductoisomerase C-terminal domain CK627_20240 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CK627_20250 PF01255 Putative undecaprenyl diphosphate synthase CK627_20255 PF01765 Ribosome recycling factor CK627_20260 PF00696 Amino acid kinase family CK627_20265 PF00889 Elongation factor TS CK627_20270 PF00318 Ribosomal protein S2 CK627_20275 PF00557 Metallopeptidase family M24 CK627_20280 PF01842 ACT domain CK627_20280 PF08335 GlnD PII-uridylyltransferase CK627_20280 PF01909 Nucleotidyltransferase domain CK627_20280 PF01966 HD domain CK627_20285 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CK627_20285 PF14602 Hexapeptide repeat of succinyl-transferase CK627_20285 PF00132 Bacterial transferase hexapeptide (six repeats) CK627_20290 PF11944 Protein of unknown function (DUF3461) CK627_20295 PF00367 phosphotransferase system, EIIB CK627_20295 PF02378 Phosphotransferase system, EIIC CK627_20300 PF07148 Maltose operon periplasmic protein precursor (MalM) CK627_20305 PF02264 LamB porin CK627_20310 PF00258 Flavodoxin CK627_20315 PF00849 RNA pseudouridylate synthase CK627_20320 PF04287 tRNA pseudouridine synthase C CK627_20345 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) CK627_20350 PF07348 Syd protein (SUKH-2) CK627_20355 PF14489 QueF-like protein CK627_20355 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CK627_20365 PF00990 Diguanylate cyclase, GGDEF domain CK627_20370 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CK627_20370 PF03641 Possible lysine decarboxylase CK627_20370 PF11892 Domain of unknown function (DUF3412) CK627_20375 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CK627_20375 PF01367 5'-3' exonuclease, C-terminal SAM fold CK627_20380 PF18324 Hypothetical protein TT1725 CK627_20380 PF00180 Isocitrate/isopropylmalate dehydrogenase CK627_20390 PF01728 FtsJ-like methyltransferase CK627_20390 PF18125 RlmM ferredoxin-like domain CK627_20395 PF04241 Protein of unknown function (DUF423) CK627_20405 PF03466 LysR substrate binding domain CK627_20405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_20410 PF00672 HAMP domain CK627_20410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_20415 PF11799 impB/mucB/samB family C-terminal domain CK627_20415 PF11798 IMS family HHH motif CK627_20415 PF00817 impB/mucB/samB family CK627_20430 PF02424 ApbE family CK627_20435 PF00111 2Fe-2S iron-sulfur cluster binding domain CK627_20435 PF00175 Oxidoreductase NAD-binding domain CK627_20435 PF00970 Oxidoreductase FAD-binding domain CK627_20440 PF02508 Rnf-Nqr subunit, membrane protein CK627_20445 PF02508 Rnf-Nqr subunit, membrane protein CK627_20450 PF04205 FMN-binding domain CK627_20455 PF03116 NQR2, RnfD, RnfE family CK627_20460 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CK627_20460 PF11973 NQRA C-terminal domain CK627_20465 PF01722 BolA-like protein CK627_20470 PF05175 Methyltransferase small domain CK627_20480 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CK627_20490 PF07690 Major Facilitator Superfamily CK627_20495 PF03502 Nucleoside-specific channel-forming protein, Tsx CK627_20500 PF04461 Protein of unknown function (DUF520) CK627_20505 PF02558 Ketopantoate reductase PanE/ApbA CK627_20505 PF08546 Ketopantoate reductase PanE/ApbA C terminal CK627_20510 PF01965 DJ-1/PfpI family CK627_20515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CK627_20515 PF00205 Thiamine pyrophosphate enzyme, central domain CK627_20515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CK627_20520 PF03306 Alpha-acetolactate decarboxylase CK627_20525 PF03466 LysR substrate binding domain CK627_20525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_20550 PF04717 Type VI secretion system, phage-baseplate injector CK627_20560 PF05638 Type VI secretion system effector, Hcp CK627_20565 PF00196 Bacterial regulatory proteins, luxR family CK627_20565 PF03472 Autoinducer binding domain CK627_20585 PF06965 Na+/H+ antiporter 1 CK627_20585 PF13462 Thioredoxin CK627_20590 PF16363 GDP-mannose 4,6 dehydratase CK627_20595 PF00970 Oxidoreductase FAD-binding domain CK627_20595 PF00111 2Fe-2S iron-sulfur cluster binding domain CK627_20595 PF00175 Oxidoreductase NAD-binding domain CK627_20600 PF03063 Prismane/CO dehydrogenase family CK627_20605 PF00210 Ferritin-like domain CK627_20645 PF00106 short chain dehydrogenase CK627_20655 PF00875 DNA photolyase CK627_20655 PF03441 FAD binding domain of DNA photolyase CK627_20660 PF13411 MerR HTH family regulatory protein CK627_20665 PF08349 Protein of unknown function (DUF1722) CK627_20695 PF01817 Chorismate mutase type II CK627_20695 PF00800 Prephenate dehydratase CK627_20720 PF08220 DeoR-like helix-turn-helix domain CK627_20720 PF00455 DeoR C terminal sensor domain CK627_20725 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CK627_20725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CK627_20730 PF17042 Nucleotide-binding C-terminal domain CK627_20730 PF07005 Sugar-binding N-terminal domain CK627_20735 PF00596 Class II Aldolase and Adducin N-terminal domain CK627_20740 PF01261 Xylose isomerase-like TIM barrel CK627_20745 PF01370 NAD dependent epimerase/dehydratase family CK627_20750 PF02447 GntP family permease CK627_20760 PF02743 Cache domain CK627_20760 PF00672 HAMP domain CK627_20760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_20765 PF03573 outer membrane porin, OprD family CK627_20770 PF00106 short chain dehydrogenase CK627_21005 PF02805 Metal binding domain of Ada CK627_21005 PF00730 HhH-GPD superfamily base excision DNA repair protein CK627_21005 PF12833 Helix-turn-helix domain CK627_21005 PF06029 AlkA N-terminal domain CK627_21010 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CK627_21010 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CK627_21025 PF01136 Peptidase family U32 CK627_21025 PF12392 Collagenase CK627_21030 PF01810 LysE type translocator CK627_21035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_21035 PF03466 LysR substrate binding domain CK627_21045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_21045 PF00672 HAMP domain CK627_21060 PF02895 Signal transducing histidine kinase, homodimeric domain CK627_21060 PF09078 CheY binding CK627_21060 PF01584 CheW-like domain CK627_21060 PF01627 Hpt domain CK627_21060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_21065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_21065 PF00672 HAMP domain CK627_21065 PF12729 Four helix bundle sensory module for signal transduction CK627_21070 PF01584 CheW-like domain CK627_21075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_21075 PF00672 HAMP domain CK627_21080 PF01739 CheR methyltransferase, SAM binding domain CK627_21080 PF03705 CheR methyltransferase, all-alpha domain CK627_21085 PF03975 CheD chemotactic sensory transduction CK627_21090 PF00072 Response regulator receiver domain CK627_21090 PF01339 CheB methylesterase CK627_21095 PF00266 Aminotransferase class-V CK627_21120 PF00512 His Kinase A (phospho-acceptor) domain CK627_21120 PF01627 Hpt domain CK627_21120 PF00989 PAS fold CK627_21120 PF00497 Bacterial extracellular solute-binding proteins, family 3 CK627_21120 PF00072 Response regulator receiver domain CK627_21120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_21125 PF00196 Bacterial regulatory proteins, luxR family CK627_21125 PF00072 Response regulator receiver domain CK627_21150 PF00563 EAL domain CK627_21150 PF01590 GAF domain CK627_21150 PF00990 Diguanylate cyclase, GGDEF domain CK627_21150 PF00989 PAS fold CK627_21160 PF12838 4Fe-4S dicluster domain CK627_21165 PF01168 Alanine racemase, N-terminal domain CK627_21165 PF00842 Alanine racemase, C-terminal domain CK627_21170 PF00772 DnaB-like helicase N terminal domain CK627_21170 PF03796 DnaB-like helicase C terminal domain CK627_21185 PF12792 CSS motif domain associated with EAL CK627_21185 PF00563 EAL domain CK627_21190 PF02872 5'-nucleotidase, C-terminal domain CK627_21190 PF00149 Calcineurin-like phosphoesterase CK627_21210 PF00158 Sigma-54 interaction domain CK627_21210 PF00072 Response regulator receiver domain CK627_21210 PF02954 Bacterial regulatory protein, Fis family CK627_21215 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CK627_21215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CK627_21225 PF04102 SlyX CK627_21230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CK627_21235 PF09526 Probable metal-binding protein (DUF2387) CK627_21245 PF00072 Response regulator receiver domain CK627_21245 PF01584 CheW-like domain CK627_21250 PF00561 alpha/beta hydrolase fold CK627_21255 PF06794 Uncharacterised protein family (UPF0270) CK627_21260 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CK627_21260 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CK627_21260 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CK627_21265 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CK627_21270 PF00535 Glycosyl transferase family 2 CK627_21275 PF01370 NAD dependent epimerase/dehydratase family CK627_21275 PF02911 Formyl transferase, C-terminal domain CK627_21275 PF00551 Formyl transferase CK627_21280 PF01522 Polysaccharide deacetylase CK627_21285 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CK627_21290 PF00892 EamA-like transporter family CK627_21295 PF00893 Small Multidrug Resistance protein CK627_21300 PF00485 Phosphoribulokinase / Uridine kinase family CK627_21315 PF02566 OsmC-like protein CK627_21320 PF13545 Crp-like helix-turn-helix domain CK627_21320 PF00027 Cyclic nucleotide-binding domain CK627_21325 PF08241 Methyltransferase domain CK627_21330 PF18416 N-acetylglucosamine binding protein domain 2 CK627_21330 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CK627_21335 PF12561 ToxR activated gene A lipoprotein domain CK627_21335 PF17945 Beta/Gamma crystallin CK627_21340 PF08329 Chitinase A, N-terminal domain CK627_21340 PF00704 Glycosyl hydrolases family 18 CK627_21345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_21345 PF00512 His Kinase A (phospho-acceptor) domain CK627_21345 PF00989 PAS fold CK627_21355 PF13443 Cro/C1-type HTH DNA-binding domain CK627_21365 PF12832 MFS_1 like family CK627_21375 PF07715 TonB-dependent Receptor Plug Domain CK627_21375 PF00593 TonB dependent receptor CK627_21395 PF01243 Pyridoxamine 5'-phosphate oxidase CK627_21400 PF06228 Haem utilisation ChuX/HutX CK627_21410 PF01032 FecCD transport family CK627_21415 PF00005 ABC transporter CK627_21430 PF01370 NAD dependent epimerase/dehydratase family CK627_21440 PF01464 Transglycosylase SLT domain CK627_21445 PF01048 Phosphorylase superfamily CK627_21460 PF12848 ABC transporter CK627_21460 PF00005 ABC transporter CK627_21470 PF00860 Permease family CK627_21475 PF05099 Tellurite resistance protein TerB CK627_21475 PF00226 DnaJ domain CK627_21480 PF00483 Nucleotidyl transferase CK627_21485 PF01636 Phosphotransferase enzyme family CK627_21490 PF03968 OstA-like protein CK627_21490 PF04453 LPS transport system D CK627_21495 PF09312 SurA N-terminal domain CK627_21495 PF00639 PPIC-type PPIASE domain CK627_21500 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CK627_21505 PF00398 Ribosomal RNA adenine dimethylase CK627_21510 PF04379 ApaG domain CK627_21515 PF00149 Calcineurin-like phosphoesterase CK627_21525 PF00296 Luciferase-like monooxygenase CK627_21545 PF13193 AMP-binding enzyme C-terminal domain CK627_21545 PF00501 AMP-binding enzyme CK627_21555 PF01926 50S ribosome-binding GTPase CK627_21555 PF01018 GTP1/OBG CK627_21560 PF01016 Ribosomal L27 protein CK627_21565 PF00829 Ribosomal prokaryotic L21 protein CK627_21570 PF00348 Polyprenyl synthetase CK627_21575 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CK627_21580 PF01145 SPFH domain / Band 7 family CK627_21585 PF01145 SPFH domain / Band 7 family CK627_21585 PF12221 Bacterial membrane protein N terminal CK627_21590 PF16360 GTP-binding GTPase Middle Region CK627_21590 PF01926 50S ribosome-binding GTPase CK627_21590 PF13167 GTP-binding GTPase N-terminal CK627_21595 PF17209 Hfq protein CK627_21605 PF08676 MutL C terminal dimerisation domain CK627_21605 PF01119 DNA mismatch repair protein, C-terminal domain CK627_21610 PF01520 N-acetylmuramoyl-L-alanine amidase CK627_21615 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CK627_21620 PF03853 YjeF-related protein N-terminus CK627_21620 PF01256 Carbohydrate kinase CK627_21625 PF08331 Domain of unknown function (DUF1730) CK627_21630 PF00480 ROK family CK627_21645 PF00005 ABC transporter CK627_21645 PF09383 NIL domain CK627_21650 PF00528 Binding-protein-dependent transport system inner membrane component CK627_21655 PF03180 NLPA lipoprotein CK627_21660 PF02357 Transcription termination factor nusG CK627_21665 PF00672 HAMP domain CK627_21665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_21665 PF12729 Four helix bundle sensory module for signal transduction CK627_21670 PF00563 EAL domain CK627_21670 PF00990 Diguanylate cyclase, GGDEF domain CK627_21670 PF03707 Bacterial signalling protein N terminal repeat CK627_21675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_21675 PF00072 Response regulator receiver domain CK627_21675 PF09456 RcsC Alpha-Beta-Loop (ABL) CK627_21675 PF00512 His Kinase A (phospho-acceptor) domain CK627_21685 PF13286 Phosphohydrolase-associated domain CK627_21685 PF01966 HD domain CK627_21690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CK627_21690 PF00512 His Kinase A (phospho-acceptor) domain CK627_21690 PF18415 Histidine kinase receptor ArcB trans-membrane domain CK627_21690 PF01627 Hpt domain CK627_21690 PF00989 PAS fold CK627_21690 PF00072 Response regulator receiver domain CK627_21710 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CK627_21715 PF03466 LysR substrate binding domain CK627_21715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CK627_21725 PF01259 SAICAR synthetase CK627_21730 PF06804 NlpB/DapX lipoprotein CK627_21735 PF00701 Dihydrodipicolinate synthetase family CK627_21740 PF01842 ACT domain CK627_21745 PF00578 AhpC/TSA family CK627_21750 PF03887 YfbU domain CK627_21755 PF04217 Protein of unknown function, DUF412 CK627_21760 PF00871 Acetokinase family CK627_21765 PF01515 Phosphate acetyl/butaryl transferase CK627_21765 PF07085 DRTGG domain CK627_21770 PF10369 Small subunit of acetolactate synthase CK627_21775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CK627_21775 PF00205 Thiamine pyrophosphate enzyme, central domain CK627_21775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CK627_21790 PF01569 PAP2 superfamily CK627_21800 PF08502 LeuA allosteric (dimerisation) domain CK627_21800 PF00682 HMGL-like CK627_21805 PF00180 Isocitrate/isopropylmalate dehydrogenase CK627_21810 PF00330 Aconitase family (aconitate hydratase) CK627_21815 PF00694 Aconitase C-terminal domain CK627_21835 PF00528 Binding-protein-dependent transport system inner membrane component CK627_21840 PF00005 ABC transporter CK627_21845 PF02562 PhoH-like protein CK627_21845 PF13638 PIN domain CK627_21855 PF08343 Ribonucleotide reductase N-terminal CK627_21855 PF00317 Ribonucleotide reductase, all-alpha domain CK627_21855 PF02867 Ribonucleotide reductase, barrel domain CK627_21890 PF18337 RapA N-terminal Tudor like domain CK627_21890 PF00271 Helicase conserved C-terminal domain CK627_21890 PF12137 RNA polymerase recycling family C-terminal CK627_21890 PF00176 SNF2 family N-terminal domain CK627_21890 PF18339 RapA N-terminal Tudor like domain 1 CK627_21895 PF00849 RNA pseudouridylate synthase CK627_21905 PF02080 TrkA-C domain CK627_21905 PF06826 Predicted Permease Membrane Region CK627_21910 PF03006 Haemolysin-III related CK627_21915 PF00282 Pyridoxal-dependent decarboxylase conserved domain CK627_21920 PF04279 Intracellular septation protein A CK627_21925 PF03795 YCII-related domain CK627_21930 PF00459 Inositol monophosphatase family CK627_21940 PF00483 Nucleotidyl transferase CK627_21945 PF00854 POT family CK627_21950 PF00072 Response regulator receiver domain CK627_21980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CK627_21985 PF02321 Outer membrane efflux protein CK627_21990 PF01207 Dihydrouridine synthase (Dus) CK627_21995 PF02954 Bacterial regulatory protein, Fis family CK627_22025 PF01521 Iron-sulphur cluster biosynthesis CK627_22035 PF00654 Voltage gated chloride channel CK627_22040 PF00202 Aminotransferase class-III CK627_22055 PF01569 PAP2 superfamily CK627_22065 PF11849 Domain of unknown function (DUF3369) CK627_22075 PF00893 Small Multidrug Resistance protein CK627_22080 PF00893 Small Multidrug Resistance protein CK627_22085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CK627_22090 PF00905 Penicillin binding protein transpeptidase domain CK627_22090 PF14814 Bifunctional transglycosylase second domain CK627_22090 PF00912 Transglycosylase CK627_22095 PF00270 DEAD/DEAH box helicase CK627_22095 PF04408 Helicase associated domain (HA2) CK627_22095 PF00271 Helicase conserved C-terminal domain CK627_22095 PF08482 ATP-dependent helicase C-terminal CK627_22105 PF03749 Sugar fermentation stimulation protein RE domain CK627_22105 PF17746 SfsA N-terminal OB domain CK627_22110 PF01258 Prokaryotic dksA/traR C4-type zinc finger CK627_22115 PF00749 tRNA synthetases class I (E and Q), catalytic domain CK627_22120 PF12627 Probable RNA and SrmB- binding site of polymerase A CK627_22120 PF12626 Polymerase A arginine-rich C-terminus CK627_22120 PF01743 Poly A polymerase head domain CK627_22125 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CK627_22130 PF02548 Ketopantoate hydroxymethyltransferase CK627_22135 PF02569 Pantoate-beta-alanine ligase CK627_22155 PF01869 BadF/BadG/BcrA/BcrD ATPase family CK627_22160 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CK627_22165 PF01061 ABC-2 type transporter CK627_22170 PF00005 ABC transporter CK627_22175 PF00156 Phosphoribosyl transferase domain CK627_22180 PF00440 Bacterial regulatory proteins, tetR family CK627_22185 PF02441 Flavoprotein CK627_22190 PF01225 Mur ligase family, catalytic domain CK627_22190 PF02875 Mur ligase family, glutamate ligase domain CK627_22190 PF08245 Mur ligase middle domain CK627_22195 PF00719 Inorganic pyrophosphatase CK627_22210 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CK627_22225 PF00005 ABC transporter CK627_22245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CK627_22245 PF08447 PAS fold CK627_22270 PF03600 Citrate transporter CK627_22270 PF02080 TrkA-C domain CK627_22275 PF00009 Elongation factor Tu GTP binding domain CK627_22280 PF01507 Phosphoadenosine phosphosulfate reductase family CK627_22285 PF14824 Sirohaem biosynthesis protein central CK627_22285 PF10414 Sirohaem synthase dimerisation region CK627_22285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CK627_22290 PF16200 C-terminal region of band_7 CK627_22290 PF01145 SPFH domain / Band 7 family CK627_22295 PF01957 NfeD-like C-terminal, partner-binding CK627_22300 PF01380 SIS domain CK627_22300 PF00571 CBS domain CK627_22305 PF00005 ABC transporter CK627_22305 PF12848 ABC transporter CK627_22315 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CK627_22345 PF00474 Sodium:solute symporter family CK627_22350 PF03734 L,D-transpeptidase catalytic domain CK627_22350 PF17969 L,D-transpeptidase C-terminal domain CK627_22355 PF00924 Mechanosensitive ion channel CK627_22360 PF00871 Acetokinase family CK627_22365 PF04074 YhcH/YjgK/YiaL CK627_22375 PF00394 Multicopper oxidase CK627_22375 PF07732 Multicopper oxidase CK627_22375 PF07731 Multicopper oxidase CK627_22380 PF01177 Asp/Glu/Hydantoin racemase CK627_22385 PF01810 LysE type translocator CK627_22390 PF00392 Bacterial regulatory proteins, gntR family CK627_22390 PF00155 Aminotransferase class I and II CK627_22415 PF00209 Sodium:neurotransmitter symporter family CK627_22425 PF00209 Sodium:neurotransmitter symporter family