locus-tag	class	description
LA341_00010	COG3681	Belongs to the UPF0597 family
LA341_00020	COG0745	RESPONSE REGULATOR receiver
LA341_00025	COG2205	protein histidine kinase activity
LA341_00035	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
LA341_00040	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
LA341_00040	COG3264	Mechanosensitive ion channel
LA341_00045	COG0436	Aminotransferase
LA341_00060	COG1196	nuclear chromosome segregation
LA341_00060	COG0741	lytic transglycosylase activity
LA341_00060	COG0739	heme binding
LA341_00075	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LA341_00085	COG0788	formyltetrahydrofolate deformylase activity
LA341_00090	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LA341_00110	COG0791	NLP P60 protein
LA341_00115	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
LA341_00125	COG0471	metal ion transport
LA341_00135	COG1376	ErfK ybiS ycfS ynhG family protein
LA341_00135	COG1388	LysM domain
LA341_00150	COG1263	PTS System
LA341_00150	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LA341_00150	COG2190	(PTS) system
LA341_00155	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
LA341_00160	COG0823	Involved in the tonB-independent uptake of proteins
LA341_00160	COG1506	peptidase
LA341_00165	COG1073	alpha beta
LA341_00205	COG3209	COG3209 Rhs family protein
LA341_00265	COG3829	transcription factor binding
LA341_00300	COG4104	PAAR repeat-containing protein
LA341_00325	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LA341_00345	COG0741	lytic transglycosylase activity
LA341_00345	COG1388	LysM domain
LA341_00350	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LA341_00355	COG2226	methyltransferase
LA341_00360	COG0328	RNA-DNA hybrid ribonuclease activity
LA341_00365	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LA341_00375	COG3437	response regulator, receiver
LA341_00375	COG0784	Response regulator, receiver
LA341_00380	COG2375	cellular response to nickel ion
LA341_00385	COG4771	TonB-dependent receptor
LA341_00390	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LA341_00395	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LA341_00400	COG1120	ATPase activity
LA341_00405	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LA341_00415	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LA341_00420	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LA341_00440	COG0708	Exodeoxyribonuclease III
LA341_00470	COG3132	Protein of unknown function, DUF480
LA341_00475	COG5002	protein histidine kinase activity
LA341_00475	COG5001	Diguanylate cyclase
LA341_00480	COG1653	transport
LA341_00485	COG2841	Protein conserved in bacteria
LA341_00495	COG0534	Mate efflux family protein
LA341_00515	COG1454	alcohol dehydrogenase
LA341_00525	COG1309	transcriptional regulator
LA341_00555	COG3152	Membrane
LA341_00560	COG2175	clavaminate synthase activity
LA341_00565	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LA341_00570	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
LA341_00575	COG4521	taurine ABC transporter
LA341_00590	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LA341_00610	COG3537	Alpha-1,2-mannosidase
LA341_00620	COG2207	Transcriptional regulator
LA341_00625	COG0538	isocitrate dehydrogenase activity
LA341_00630	COG0659	secondary active sulfate transmembrane transporter activity
LA341_00640	COG0791	NLP P60 protein
LA341_00645	COG0583	DNA-binding transcription factor activity
LA341_00650	COG0450	alkyl hydroperoxide reductase
LA341_00670	COG0500	methyltransferase
LA341_00675	COG4106	trans-aconitate 2-methyltransferase activity
LA341_00680	COG1801	Protein of unknown function DUF72
LA341_00690	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
LA341_00695	COG0217	transcriptional regulatory protein
LA341_00700	COG1454	alcohol dehydrogenase
LA341_00700	COG1012	belongs to the aldehyde dehydrogenase family
LA341_00705	COG2095	MarC family integral membrane protein
LA341_00715	COG0601	transmembrane transport
LA341_00720	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LA341_00735	COG0861	Integral membrane protein TerC family
LA341_00740	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LA341_00745	COG2020	methyltransferase activity
LA341_00775	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LA341_00780	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
LA341_00785	COG0326	Molecular chaperone. Has ATPase activity
LA341_00790	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LA341_00795	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LA341_00800	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LA341_00810	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
LA341_00815	COG0505	Belongs to the CarA family
LA341_00820	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
LA341_00825	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LA341_00860	COG0346	lactoylglutathione lyase activity
LA341_00865	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LA341_00870	COG4660	Part of a membrane complex involved in electron transport
LA341_00875	COG4659	FMN binding
LA341_00880	COG4658	electron transport chain
LA341_00890	COG2878	Part of a membrane complex involved in electron transport
LA341_00895	COG4657	Part of a membrane complex involved in electron transport
LA341_00900	COG1061	Type III restriction enzyme res subunit
LA341_00920	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LA341_00950	COG2979	Protein of unknown function (DUF533)
LA341_00955	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LA341_00965	COG1294	oxidase, subunit
LA341_00985	COG3220	belongs to the UPF0276 family
LA341_01000	COG2814	Major facilitator Superfamily
LA341_01010	COG0656	L-ascorbic acid biosynthetic process
LA341_01045	COG0583	DNA-binding transcription factor activity
LA341_01050	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LA341_01055	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LA341_01060	COG2271	Major facilitator Superfamily
LA341_01065	COG1349	DNA-binding transcription factor activity
LA341_01075	COG0584	glycerophosphoryl diester phosphodiesterase
LA341_01080	COG4574	serine-type endopeptidase inhibitor activity
LA341_01085	COG3085	chromosome segregation
LA341_01090	COG0583	DNA-binding transcription factor activity
LA341_01100	COG1448	Aminotransferase
LA341_01105	COG0433	COG0433 Predicted ATPase
LA341_01120	COG0658	competence protein
LA341_01120	COG2333	competence protein COMEC
LA341_01125	COG1132	(ABC) transporter
LA341_01130	COG1663	tetraacyldisaccharide 4'-kinase activity
LA341_01135	COG2835	tetraacyldisaccharide 4'-kinase activity
LA341_01140	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
LA341_01145	COG2197	response regulator
LA341_01150	COG0322	excinuclease ABC activity
LA341_01175	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
LA341_01250	COG0826	peptidase U32
LA341_01255	COG0826	peptidase U32
LA341_01260	COG3154	lipid carrier protein
LA341_01275	COG1959	2 iron, 2 sulfur cluster binding
LA341_01280	COG1104	cysteine desulfurase activity
LA341_01285	COG0822	iron-sulfur transferase activity
LA341_01295	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
LA341_01300	COG0443	Heat shock 70 kDa protein
LA341_01305	COG0633	Ferredoxin
LA341_01315	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LA341_01320	COG0105	UTP biosynthetic process
LA341_01325	COG0820	rRNA (adenine-C2-)-methyltransferase activity
LA341_01335	COG1426	Protein conserved in bacteria
LA341_01340	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
LA341_01345	COG0124	histidyl-tRNA synthetase
LA341_01350	COG2976	Protein conserved in bacteria
LA341_01355	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LA341_01360	COG1160	GTP binding
LA341_01365	COG1645	bacterial-type flagellum-dependent swarming motility
LA341_01375	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
LA341_01380	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LA341_01380	COG0047	phosphoribosylformylglycinamidine synthase activity
LA341_01385	COG2056	Na+-H+ antiporter family
LA341_01390	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LA341_01395	COG0671	phosphoesterase, PA-phosphatase related
LA341_01400	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LA341_01405	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LA341_01415	COG0101	tRNA pseudouridine synthase activity
LA341_01420	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LA341_01425	COG0285	dihydrofolate synthase activity
LA341_01430	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
LA341_01435	COG0393	Putative heavy-metal-binding
LA341_01440	COG1368	sulfuric ester hydrolase activity
LA341_01450	COG0527	aspartate kinase activity
LA341_01455	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
LA341_01455	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
LA341_01460	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LA341_01480	COG0596	Alpha beta hydrolase
LA341_01485	COG0346	lactoylglutathione lyase activity
LA341_01495	COG0583	DNA-binding transcription factor activity
LA341_01500	COG1620	l-lactate permease
LA341_01505	COG0247	lactate metabolic process
LA341_01510	COG1139	Iron-sulfur cluster binding protein
LA341_01550	COG0577	efflux transmembrane transporter activity
LA341_01575	COG2814	Major facilitator Superfamily
LA341_01600	COG0672	)-iron permease
LA341_01620	COG0367	asparagine synthase
LA341_01630	COG4651	solute:proton antiporter activity
LA341_01630	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LA341_01635	COG0647	UMP catabolic process
LA341_01645	COG1902	pentaerythritol trinitrate reductase activity
LA341_01650	COG1253	flavin adenine dinucleotide binding
LA341_01660	COG0277	FAD linked oxidase domain protein
LA341_01660	COG0247	lactate metabolic process
LA341_01670	COG2050	protein possibly involved in aromatic compounds catabolism
LA341_01680	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
LA341_01680	COG2199	diguanylate cyclase activity
LA341_01685	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
LA341_01695	COG1007	ATP synthesis coupled electron transport
LA341_01700	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LA341_01710	COG0713	ATP synthesis coupled electron transport
LA341_01715	COG0839	Belongs to the complex I subunit 6 family
LA341_01720	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LA341_01725	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
LA341_01730	COG1034	ATP synthesis coupled electron transport
LA341_01745	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LA341_01745	COG0649	NAD binding
LA341_01750	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LA341_01755	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LA341_01760	COG1360	Flagellar Motor Protein
LA341_01765	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LA341_01785	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
LA341_01795	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
LA341_01800	COG4597	amino acid ABC transporter
LA341_01810	COG0765	amino acid transport
LA341_01815	COG1126	abc transporter atp-binding protein
LA341_01825	COG0724	RNA recognition motif
LA341_01830	COG4989	oxidoreductase activity
LA341_01855	COG3437	response regulator, receiver
LA341_01860	COG0583	DNA-binding transcription factor activity
LA341_01865	COG5001	Diguanylate cyclase
LA341_01865	COG3300	MHYT domain
LA341_01870	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
LA341_01890	COG3708	Transcriptional regulator
LA341_01890	COG2207	Transcriptional regulator
LA341_01895	COG4774	siderophore transport
LA341_01910	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LA341_01915	COG0583	DNA-binding transcription factor activity
LA341_01920	COG2723	6-phospho-beta-galactosidase activity
LA341_01925	COG1944	ATP diphosphatase activity
LA341_01930	COG2116	formate transmembrane transporter activity
LA341_01935	COG1882	Formate acetyltransferase
LA341_01940	COG2983	Belongs to the UPF0260 family
LA341_01955	COG0058	SHG alpha-glucan phosphorylase activity
LA341_01960	COG0471	metal ion transport
LA341_01965	COG3118	belongs to the thioredoxin family
LA341_01975	COG1132	(ABC) transporter
LA341_01980	COG1132	(ABC) transporter
LA341_01990	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LA341_02000	COG0583	DNA-binding transcription factor activity
LA341_02010	COG2501	S4 domain
LA341_02040	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
LA341_02065	COG0085	RNA polymerase activity
LA341_02085	COG2009	succinate dehydrogenase
LA341_02090	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
LA341_02095	COG1053	succinate dehydrogenase
LA341_02105	COG0567	Dehydrogenase, E1 component
LA341_02110	COG0508	dehydrogenase complex catalyzes the overall conversion of
LA341_02115	COG0045	succinate-CoA ligase (ADP-forming) activity
LA341_02135	COG1446	asparaginase
LA341_02150	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LA341_02160	COG3842	ATPase activity
LA341_02165	COG1840	ABC-type Fe3 transport system, periplasmic component
LA341_02175	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
LA341_02180	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LA341_02185	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LA341_02190	COG3088	subunit of a heme lyase
LA341_02190	COG4235	cytochrome complex assembly
LA341_02200	COG1138	Cytochrome C-type biogenesis protein
LA341_02205	COG3301	Polysulphide reductase, NrfD
LA341_02210	COG0437	4 iron, 4 sulfur cluster binding
LA341_02215	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
LA341_02230	COG0247	lactate metabolic process
LA341_02235	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
LA341_02240	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LA341_02245	COG3012	SEC-C Motif Domain Protein
LA341_02250	COG0840	transmembrane signaling receptor activity
LA341_02255	COG1846	Transcriptional regulator
LA341_02255	COG1940	carbohydrate kinase activity
LA341_02260	COG3148	PFAM DTW domain containing protein
LA341_02265	COG0730	response to heat
LA341_02270	COG0583	DNA-binding transcription factor activity
LA341_02285	COG3593	DNA synthesis involved in DNA repair
LA341_02345	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LA341_02350	COG1011	Hydrolase
LA341_02360	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LA341_02365	COG2832	Protein of unknown function (DUF454)
LA341_02370	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LA341_02380	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LA341_02385	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
LA341_02400	COG1560	Kdo2-lipid A biosynthetic process
LA341_02405	COG1560	Kdo2-lipid A biosynthetic process
LA341_02420	COG0417	DNA replication proofreading
LA341_02435	COG1451	nucleotide metabolic process
LA341_02450	COG3069	C4-dicarboxylate transmembrane transporter activity
LA341_02465	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LA341_02465	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
LA341_02470	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LA341_02480	COG0569	domain protein
LA341_02480	COG2985	domain, Protein
LA341_02495	COG0556	nucleotide-excision repair
LA341_02505	COG0586	Pfam SNARE associated Golgi protein
LA341_02510	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
LA341_02515	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LA341_02520	COG2186	Transcriptional regulator
LA341_02530	COG4681	YaeQ
LA341_02540	COG3829	transcription factor binding
LA341_02570	COG0534	Mate efflux family protein
LA341_02580	COG0307	riboflavin synthase, alpha
LA341_02590	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LA341_02595	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
LA341_02600	COG0697	spore germination
LA341_02605	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LA341_02645	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LA341_02650	COG3099	Belongs to the UPF0263 family
LA341_02655	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
LA341_02660	COG2894	cell division
LA341_02665	COG0850	regulation of cytokinetic process
LA341_02670	COG3100	YcgL domain-containing protein
LA341_02675	COG1760	l-serine dehydratase
LA341_02680	COG1760	l-serine dehydratase
LA341_02685	COG3123	guanosine phosphorylase activity
LA341_02690	COG1301	dicarboxylic acid transport
LA341_02700	COG0205	6-phosphofructokinase activity
LA341_02710	COG1434	Gram-negative-bacterium-type cell wall biogenesis
LA341_02715	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LA341_02725	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
LA341_02730	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
LA341_02735	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LA341_02740	COG0456	acetyltransferase
LA341_02755	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LA341_02760	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LA341_02765	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LA341_02775	COG0549	Belongs to the carbamate kinase family
LA341_02780	COG0697	spore germination
LA341_02790	COG3608	succinylglutamate desuccinylase aspartoacylase
LA341_02790	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
LA341_02795	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LA341_02800	COG2068	MobA-Related Protein
LA341_02805	COG0493	'glutamate synthase
LA341_02805	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LA341_02810	COG0402	S-adenosylhomocysteine deaminase activity
LA341_02815	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
LA341_02820	COG2080	2 iron, 2 sulfur cluster binding
LA341_02820	COG1529	Aldehyde oxidase and xanthine dehydrogenase
LA341_02825	COG2233	PERMEase
LA341_02830	COG0402	S-adenosylhomocysteine deaminase activity
LA341_02835	COG2252	PERMEase
LA341_02840	COG1529	Aldehyde oxidase and xanthine dehydrogenase
LA341_02845	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
LA341_02850	COG2080	2 iron, 2 sulfur cluster binding
LA341_02855	COG3134	Outer membrane lipoprotein
LA341_02865	COG1288	antiporter activity
LA341_02870	COG0318	PFAM AMP-dependent synthetase and ligase
LA341_02875	COG3706	GGDEF domain
LA341_02880	COG2824	Alkylphosphonate utilization operon protein PhnA
LA341_02895	COG3525	Glycosyl hydrolase, family 20, catalytic domain
LA341_02910	COG3706	GGDEF domain
LA341_02920	COG2840	Smr protein MutS2
LA341_02925	COG2890	protein-(glutamine-N5) methyltransferase activity
LA341_02930	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LA341_02935	COG0513	Belongs to the DEAD box helicase family
LA341_02940	COG0814	amino acid
LA341_02945	COG1609	Transcriptional regulator
LA341_02950	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LA341_02950	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LA341_02955	COG1105	Belongs to the carbohydrate kinase PfkB family
LA341_02960	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LA341_02960	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
LA341_02960	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LA341_02965	COG3313	Fe-S protein
LA341_02970	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
LA341_02975	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LA341_02980	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LA341_02985	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LA341_02995	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LA341_03020	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LA341_03025	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LA341_03030	COG0291	Belongs to the bacterial ribosomal protein bL35 family
LA341_03035	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LA341_03040	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LA341_03045	COG0072	phenylalanine-tRNA ligase activity
LA341_03045	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LA341_03050	COG0776	regulation of translation
LA341_03055	COG0784	Response regulator, receiver
LA341_03055	COG2205	protein histidine kinase activity
LA341_03080	COG3300	MHYT domain
LA341_03080	COG5001	Diguanylate cyclase
LA341_03085	COG1609	Transcriptional regulator
LA341_03090	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LA341_03095	COG1879	ABC-type sugar transport system periplasmic component
LA341_03100	COG1172	Belongs to the binding-protein-dependent transport system permease family
LA341_03105	COG1129	ABC transporter
LA341_03110	COG1869	D-ribose catabolic process
LA341_03115	COG2194	sulfuric ester hydrolase activity
LA341_03125	COG1177	transmembrane transport
LA341_03150	COG0037	tRNA processing
LA341_03155	COG0589	response to stress
LA341_03160	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LA341_03175	COG2217	Heavy metal translocating P-type atpase
LA341_03185	COG2010	Cytochrome c
LA341_03200	COG3278	Belongs to the heme-copper respiratory oxidase family
LA341_03210	COG1956	GAF domain-containing protein
LA341_03215	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
LA341_03220	COG0793	Belongs to the peptidase S41A family
LA341_03225	COG0308	aminopeptidase N
LA341_03235	COG2902	Dehydrogenase
LA341_03240	COG0167	dihydroorotate dehydrogenase activity
LA341_03250	COG2203	Gaf domain
LA341_03250	COG3706	GGDEF domain
LA341_03250	COG4251	negative regulation of phosphorylation
LA341_03250	COG5001	Diguanylate cyclase
LA341_03255	COG2201	protein-glutamate methylesterase activity
LA341_03260	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LA341_03270	COG3290	protein histidine kinase activity
LA341_03270	COG0840	transmembrane signaling receptor activity
LA341_03290	COG0254	rRNA binding
LA341_03295	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LA341_03300	COG0116	Belongs to the methyltransferase superfamily
LA341_03300	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LA341_03310	COG0488	(ABC) transporter
LA341_03320	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LA341_03325	COG1067	ATP-dependent peptidase activity
LA341_03345	COG3141	response to X-ray
LA341_03355	COG4221	oxidoreductase activity
LA341_03400	COG0372	Belongs to the citrate synthase family
LA341_03405	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
LA341_03415	COG2995	paraquat-inducible protein a
LA341_03420	COG3008	intermembrane lipid transfer
LA341_03425	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
LA341_03425	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LA341_03440	COG0084	hydrolase, TatD family'
LA341_03445	COG0470	DNA polymerase III
LA341_03450	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LA341_03455	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LA341_03460	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LA341_03470	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LA341_03475	COG1028	Short-chain dehydrogenase reductase Sdr
LA341_03485	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LA341_03490	COG0416	fatty acid biosynthetic process
LA341_03495	COG0333	Belongs to the bacterial ribosomal protein bL32 family
LA341_03500	COG1399	metal-binding, possibly nucleic acid-binding protein
LA341_03505	COG0424	maF-like protein
LA341_03515	COG1530	ribonuclease E activity
LA341_03520	COG0306	phosphate transporter
LA341_03525	COG0717	Belongs to the dCTP deaminase family
LA341_03530	COG0572	uridine kinase
LA341_03535	COG0489	protein tyrosine kinase activity
LA341_03540	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LA341_03540	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LA341_03545	COG0625	glutathione transferase activity
LA341_03550	COG1254	Belongs to the acylphosphatase family
LA341_03560	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LA341_03575	COG0709	Synthesizes selenophosphate from selenide and ATP
LA341_03580	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
LA341_03585	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LA341_03595	COG0318	PFAM AMP-dependent synthetase and ligase
LA341_03600	COG2267	carboxylic ester hydrolase activity
LA341_03610	COG1214	PFAM Peptidase M22, glycoprotease
LA341_03615	COG1199	ATP-dependent helicase activity
LA341_03625	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
LA341_03630	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LA341_03635	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LA341_03640	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LA341_03640	COG0131	Imidazoleglycerol-phosphate dehydratase
LA341_03645	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LA341_03650	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
LA341_03655	COG0107	imidazoleglycerol-phosphate synthase activity
LA341_03660	COG0140	phosphoribosyl-ATP diphosphatase activity
LA341_03660	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LA341_03680	COG0494	nUDIX hydrolase
LA341_03685	COG0814	amino acid
LA341_03690	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
LA341_03695	COG0514	ATP-dependent DNA helicase (RecQ)
LA341_03700	COG2766	serine protein kinase
LA341_03705	COG2718	Belongs to the UPF0229 family
LA341_03710	COG2719	SpoVR family
LA341_03715	COG1024	Enoyl-CoA hydratase
LA341_03715	COG1250	3-hydroxyacyl-CoA dehydrogenase
LA341_03720	COG0183	Belongs to the thiolase family
LA341_03725	COG0714	Associated with various cellular activities
LA341_03745	COG2304	oxidoreductase activity
LA341_03755	COG1595	DNA-templated transcription, initiation
LA341_03765	COG2067	long-chain fatty acid transport protein
LA341_03770	COG2067	long-chain fatty acid transport protein
LA341_03775	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
LA341_03790	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
LA341_03800	COG1643	Atp-dependent helicase
LA341_03805	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
LA341_03805	COG0617	tRNA 3'-terminal CCA addition
LA341_03805	COG0517	IMP dehydrogenase activity
LA341_03810	COG0583	DNA-binding transcription factor activity
LA341_03815	COG0436	Aminotransferase
LA341_03820	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LA341_03970	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LA341_04010	COG0584	glycerophosphoryl diester phosphodiesterase
LA341_04020	COG2271	Major facilitator Superfamily
LA341_04040	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LA341_04050	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
LA341_04130	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LA341_04145	COG0582	viral genome integration into host DNA
LA341_04150	COG2925	Exonuclease
LA341_04160	COG3345	alpha-galactosidase
LA341_04165	COG1380	Effector of murein hydrolase LrgA
LA341_04170	COG1346	cytolysis
LA341_04175	COG0295	cytidine deaminase activity
LA341_04180	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LA341_04185	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LA341_04210	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
LA341_04225	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
LA341_04230	COG0651	ATP synthesis coupled electron transport
LA341_04235	COG0650	Formate hydrogenlyase subunit 4
LA341_04240	COG3261	NADH dehydrogenase
LA341_04240	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
LA341_04245	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LA341_04250	COG3260	NADH ubiquinone oxidoreductase 20
LA341_04260	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
LA341_04270	COG1921	L-seryl-tRNASec selenium transferase activity
LA341_04280	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
LA341_04285	COG0298	carbon dioxide binding
LA341_04295	COG0309	Hydrogenase expression formation protein (HypE)
LA341_04300	COG0375	protein maturation
LA341_04310	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
LA341_04315	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
LA341_04325	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LA341_04335	COG0747	negative chemotaxis
LA341_04340	COG1773	rubredoxin
LA341_04345	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
LA341_04350	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
LA341_04355	COG5557	Pfam Polysulphide reductase, NrfD
LA341_04360	COG0437	4 iron, 4 sulfur cluster binding
LA341_04365	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
LA341_04370	COG0438	transferase activity, transferring glycosyl groups
LA341_04445	COG0438	transferase activity, transferring glycosyl groups
LA341_04455	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LA341_04495	COG0784	Response regulator, receiver
LA341_04495	COG2205	protein histidine kinase activity
LA341_04505	COG0667	Aldo Keto reductase
LA341_04510	COG0583	DNA-binding transcription factor activity
LA341_04525	COG0730	response to heat
LA341_04535	COG1028	Short-chain dehydrogenase reductase Sdr
LA341_04545	COG1024	Enoyl-CoA hydratase
LA341_04550	COG1024	Enoyl-CoA hydratase
LA341_04555	COG1960	acyl-CoA dehydrogenase activity
LA341_04560	COG1960	acyl-CoA dehydrogenase activity
LA341_04565	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
LA341_04570	COG1024	Enoyl-CoA hydratase
LA341_04600	COG1584	GPR1 FUN34 yaaH family protein
LA341_04605	COG3228	Belongs to the MtfA family
LA341_04620	COG1024	Enoyl-CoA hydratase
LA341_04635	COG3162	membrane
LA341_04640	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LA341_04650	COG0488	(ABC) transporter
LA341_04655	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LA341_04660	COG0776	regulation of translation
LA341_04665	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LA341_04670	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LA341_04675	COG0740	serine-type endopeptidase activity
LA341_04680	COG0544	peptidyl-prolyl cis-trans isomerase activity
LA341_04690	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
LA341_04695	COG4591	ABC-type transport system involved in lipoprotein release permease component
LA341_04700	COG1136	(ABC) transporter
LA341_04705	COG4591	ABC-type transport system involved in lipoprotein release permease component
LA341_04715	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LA341_04720	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
LA341_04725	COG4166	transmembrane transport
LA341_04730	COG0697	spore germination
LA341_04740	COG2062	phosphohistidine phosphatase, SixA
LA341_04750	COG0500	methyltransferase
LA341_04785	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LA341_04785	COG0519	Catalyzes the synthesis of GMP from XMP
LA341_04790	COG0517	IMP dehydrogenase activity
LA341_04790	COG0516	GMP reductase activity
LA341_04795	COG2200	EAL domain
LA341_04800	COG1570	exodeoxyribonuclease VII activity
LA341_04805	COG1181	Belongs to the D-alanine--D-alanine ligase family
LA341_04815	COG0386	Belongs to the glutathione peroxidase family
LA341_04820	COG0513	Belongs to the DEAD box helicase family
LA341_04835	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LA341_04840	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
LA341_04845	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
LA341_04900	COG3300	MHYT domain
LA341_04900	COG5001	Diguanylate cyclase
LA341_04915	COG0840	transmembrane signaling receptor activity
LA341_04920	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LA341_04930	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
LA341_04935	COG0563	adenylate kinase activity
LA341_04945	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LA341_04950	COG1286	toxin biosynthetic process
LA341_04955	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LA341_04960	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LA341_04965	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
LA341_04970	COG0531	amino acid
LA341_04970	COG1674	ftsk spoiiie
LA341_04980	COG0686	Belongs to the AlaDH PNT family
LA341_04985	COG0492	ferredoxin-NADP+ reductase activity
LA341_04990	COG3706	GGDEF domain
LA341_04995	COG3134	Outer membrane lipoprotein
LA341_05000	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
LA341_05005	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
LA341_05010	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LA341_05015	COG0542	response to heat
LA341_05020	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
LA341_05025	COG1278	Cold shock
LA341_05030	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LA341_05055	COG1022	Amp-dependent synthetase and ligase
LA341_05070	COG0861	Integral membrane protein TerC family
LA341_05075	COG2885	chlorophyll binding
LA341_05080	COG2199	diguanylate cyclase activity
LA341_05105	COG1012	belongs to the aldehyde dehydrogenase family
LA341_05110	COG1177	transmembrane transport
LA341_05115	COG1176	ABC-type spermidine putrescine transport system, permease component I
LA341_05120	COG3842	ATPase activity
LA341_05125	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
LA341_05130	COG0583	DNA-binding transcription factor activity
LA341_05135	COG3768	UPF0283 membrane protein
LA341_05140	COG3106	COG3106 Predicted ATPase
LA341_05155	COG1842	Phage shock protein A
LA341_05160	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
LA341_05165	COG0747	negative chemotaxis
LA341_05170	COG4168	peptide transport system, permease
LA341_05175	COG4171	peptide transport system, permease
LA341_05185	COG4172	Belongs to the ABC transporter superfamily
LA341_05190	COG0326	Molecular chaperone. Has ATPase activity
LA341_05195	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LA341_05200	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LA341_05250	COG4974	Belongs to the 'phage' integrase family
LA341_05275	COG1435	thymidine kinase activity
LA341_05280	COG1757	Na H antiporter
LA341_05285	COG2916	Histone family protein nucleoid-structuring protein H-NS
LA341_05290	COG2096	Adenosyltransferase
LA341_05295	COG3530	Putative quorum-sensing-regulated virulence factor
LA341_05300	COG0602	queuosine metabolic process
LA341_05305	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
LA341_05325	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
LA341_05335	COG0776	regulation of translation
LA341_05340	COG0539	negative regulation of cytoplasmic translation
LA341_05345	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
LA341_05350	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LA341_05355	COG0583	DNA-binding transcription factor activity
LA341_05370	COG0659	secondary active sulfate transmembrane transporter activity
LA341_05420	COG0625	glutathione transferase activity
LA341_05430	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
LA341_05445	COG0564	pseudouridine synthase activity
LA341_05460	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LA341_05470	COG2431	L-lysine efflux transmembrane transporter activity
LA341_05485	COG1393	Belongs to the ArsC family
LA341_05495	COG4783	chaperone-mediated protein folding
LA341_05500	COG0425	Belongs to the sulfur carrier protein TusA family
LA341_05520	COG2326	polyphosphate kinase activity
LA341_05530	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LA341_05540	COG3842	ATPase activity
LA341_05545	COG3833	ABC-type maltose transport systems, permease component
LA341_05550	COG1175	transmembrane transport
LA341_05560	COG3081	Nucleoid-associated protein
LA341_05565	COG3082	Protein of unknown function (DUF1414)
LA341_05570	COG3083	sulfuric ester hydrolase activity
LA341_05575	COG1464	Belongs to the NlpA lipoprotein family
LA341_05600	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LA341_05600	COG0574	Belongs to the PEP-utilizing enzyme family
LA341_05605	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
LA341_05615	COG1113	amino acid transport
LA341_05625	COG3852	Histidine kinase
LA341_05640	COG3119	arylsulfatase activity
LA341_05645	COG0641	radical SAM
LA341_05655	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
LA341_05655	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
LA341_05660	COG0509	glycine decarboxylation via glycine cleavage system
LA341_05665	COG0404	The glycine cleavage system catalyzes the degradation of glycine
LA341_05670	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LA341_05675	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LA341_05680	COG3079	Belongs to the UPF0149 family
LA341_05685	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
LA341_05695	COG0642	Histidine kinase
LA341_05730	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LA341_05735	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LA341_05740	COG1862	Preprotein translocase
LA341_05745	COG0343	queuine tRNA-ribosyltransferase activity
LA341_05750	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
LA341_05755	COG0517	IMP dehydrogenase activity
LA341_05765	COG3634	alkyl hydroperoxide reductase activity
LA341_05810	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LA341_05820	COG1242	4 iron, 4 sulfur cluster binding
LA341_05825	COG0070	glutamate synthase
LA341_05825	COG0067	glutamate synthase
LA341_05825	COG0069	glutamate synthase activity
LA341_05830	COG0493	'glutamate synthase
LA341_05835	COG0513	Belongs to the DEAD box helicase family
LA341_05850	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
LA341_05860	COG0023	Translation Initiation Factor
LA341_05865	COG2119	membrane
LA341_05915	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LA341_05925	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LA341_05930	COG2814	Major facilitator Superfamily
LA341_05935	COG0625	glutathione transferase activity
LA341_05960	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LA341_05970	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LA341_05975	COG1086	Polysaccharide biosynthesis protein
LA341_05980	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LA341_06020	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LA341_06045	COG1215	transferase activity, transferring glycosyl groups
LA341_06075	COG1216	Glycosyl transferase, family 2
LA341_06090	COG0318	PFAM AMP-dependent synthetase and ligase
LA341_06110	COG1083	cytidylyl-transferase
LA341_06120	COG2089	acid synthase
LA341_06155	COG1334	flagellar protein FlaG
LA341_06165	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LA341_06180	COG0301	tRNA thio-modification
LA341_06180	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LA341_06190	COG4953	penicillin-binding protein 1C
LA341_06195	COG2373	Large extracellular alpha-helical protein
LA341_06205	COG0446	pyridine nucleotide-disulphide oxidoreductase
LA341_06210	COG3300	MHYT domain
LA341_06210	COG5001	Diguanylate cyclase
LA341_06215	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LA341_06235	COG1252	NADH dehydrogenase
LA341_06245	COG2233	PERMEase
LA341_06255	COG2354	Protein conserved in bacteria
LA341_06270	COG1733	regulation of RNA biosynthetic process
LA341_06275	COG1301	dicarboxylic acid transport
LA341_06290	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
LA341_06310	COG0537	adenosine 5'-monophosphoramidase activity
LA341_06345	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LA341_06350	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LA341_06360	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LA341_06365	COG1605	Chorismate mutase
LA341_06365	COG0287	Prephenate dehydrogenase
LA341_06375	COG1199	ATP-dependent helicase activity
LA341_06385	COG0123	including yeast histone deacetylase and acetoin utilization protein
LA341_06390	COG0477	Major facilitator Superfamily
LA341_06395	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LA341_06420	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LA341_06425	COG2197	response regulator
LA341_06435	COG2271	Major facilitator Superfamily
LA341_06440	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LA341_06445	COG0765	amino acid transport
LA341_06470	COG1253	flavin adenine dinucleotide binding
LA341_06475	COG0704	Plays a role in the regulation of phosphate uptake
LA341_06485	COG0581	inorganic phosphate transmembrane transporter activity
LA341_06490	COG0573	inorganic phosphate transmembrane transporter activity
LA341_06495	COG0590	tRNA wobble adenosine to inosine editing
LA341_06510	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LA341_06530	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LA341_06535	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
LA341_06540	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LA341_06545	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LA341_06570	COG2716	regulation of RNA biosynthetic process
LA341_06575	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LA341_06585	COG2239	Acts as a magnesium transporter
LA341_06600	COG1705	Flagellar rod assembly protein muramidase FlgJ
LA341_06600	COG3951	Flagellar rod assembly protein muramidase FlgJ
LA341_06605	COG1706	bacterial-type flagellum-dependent cell motility
LA341_06610	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
LA341_06620	COG4787	bacterial-type flagellum-dependent cell motility
LA341_06640	COG1815	bacterial-type flagellum-dependent cell motility
LA341_06645	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LA341_06650	COG0784	Response regulator, receiver
LA341_06650	COG0835	chemotaxis
LA341_06655	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
LA341_06670	COG0622	Phosphoesterase
LA341_06675	COG4166	transmembrane transport
LA341_06690	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
LA341_06700	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LA341_06705	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LA341_06710	COG1882	Formate acetyltransferase
LA341_06715	COG1349	DNA-binding transcription factor activity
LA341_06725	COG4166	transmembrane transport
LA341_06750	COG1278	Cold shock
LA341_06775	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LA341_06775	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
LA341_06780	COG1028	Short-chain dehydrogenase reductase Sdr
LA341_06785	COG1535	isochorismatase
LA341_06785	COG3433	isochorismatase activity
LA341_06790	COG1021	2,3-dihydroxybenzoate-AMP ligase
LA341_06795	COG1169	isochorismate synthase
LA341_06800	COG4771	TonB-dependent receptor
LA341_06805	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LA341_06825	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LA341_06845	COG2911	Protein conserved in bacteria
LA341_06850	COG0729	surface antigen
LA341_06860	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LA341_06865	COG0583	DNA-binding transcription factor activity
LA341_06880	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LA341_06885	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LA341_06890	COG4134	Bacterial extracellular solute-binding protein
LA341_06895	COG4135	transport system, permease component
LA341_06900	COG4136	ATPase activity
LA341_06905	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LA341_06910	COG2951	lytic endotransglycosylase activity
LA341_06925	COG0033	Phosphoglucomutase
LA341_06930	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
LA341_06935	COG0596	Alpha beta hydrolase
LA341_06950	COG0716	FMN binding
LA341_06960	COG0735	belongs to the Fur family
LA341_06965	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LA341_06975	COG1263	PTS System
LA341_06975	COG2190	(PTS) system
LA341_06975	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LA341_06980	COG0363	glucosamine-6-phosphate deaminase activity
LA341_06985	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LA341_06990	COG1940	carbohydrate kinase activity
LA341_06990	COG1846	Transcriptional regulator
LA341_06995	COG2194	sulfuric ester hydrolase activity
LA341_07005	COG3275	phosphorelay sensor kinase activity
LA341_07010	COG3279	Response regulator of the LytR AlgR family
LA341_07015	COG1966	Carbon starvation protein
LA341_07025	COG1566	PFAM secretion protein HlyD family protein
LA341_07030	COG1061	Type III restriction enzyme res subunit
LA341_07035	COG2027	D-alanyl-D-alanine carboxypeptidase
LA341_07040	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LA341_07045	COG3021	interspecies interaction between organisms
LA341_07055	COG1607	acyl-coa hydrolase
LA341_07060	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LA341_07075	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
LA341_07075	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
LA341_07075	COG1013	pyruvate-flavodoxin oxidoreductase activity
LA341_07075	COG0674	pyruvate-flavodoxin oxidoreductase activity
LA341_07085	COG3217	Mosc domain protein beta barrel domain protein
LA341_07085	COG0633	Ferredoxin
LA341_07085	COG0633	Ferredoxin
LA341_07085	COG3217	Mosc domain protein beta barrel domain protein
LA341_07095	COG0501	Belongs to the peptidase M48B family
LA341_07100	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
LA341_07105	COG1073	alpha beta
LA341_07105	COG2226	methyltransferase
LA341_07110	COG0156	8-amino-7-oxononanoate synthase activity
LA341_07115	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
LA341_07120	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LA341_07135	COG0017	Asparaginyl-tRNA synthetase
LA341_07140	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LA341_07150	COG1473	amidohydrolase
LA341_07155	COG3069	C4-dicarboxylate transmembrane transporter activity
LA341_07165	COG1393	Belongs to the ArsC family
LA341_07170	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LA341_07175	COG1876	peptidase activity
LA341_07190	COG3263	regulation of cellular component size
LA341_07200	COG3263	regulation of cellular component size
LA341_07205	COG1280	lysine exporter protein (LysE YggA)
LA341_07230	COG1957	nucleoside hydrolase
LA341_07245	COG1454	alcohol dehydrogenase
LA341_07250	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LA341_07255	COG0702	epimerase
LA341_07265	COG0095	Lipoate-protein ligase
LA341_07295	COG0640	Transcriptional regulator
LA341_07310	COG1285	pathogenesis
LA341_07315	COG0484	heat shock protein binding
LA341_07320	COG0443	Heat shock 70 kDa protein
LA341_07325	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LA341_07330	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LA341_07335	COG0583	DNA-binding transcription factor activity
LA341_07340	COG1486	melibiose metabolic process
LA341_07345	COG0497	DNA recombination
LA341_07355	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LA341_07360	COG1136	(ABC) transporter
LA341_07360	COG0577	efflux transmembrane transporter activity
LA341_07370	COG2916	Histone family protein nucleoid-structuring protein H-NS
LA341_07415	COG1091	dTDP-4-dehydrorhamnose reductase activity
LA341_07430	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LA341_07480	COG1132	(ABC) transporter
LA341_07520	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LA341_07525	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LA341_07530	COG1309	transcriptional regulator
LA341_07545	COG1342	Belongs to the UPF0251 family
LA341_07625	COG2181	nitrate reductase activity
LA341_07630	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
LA341_07635	COG1140	nitrate reductase beta subunit
LA341_07640	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
LA341_07645	COG2223	nitrite transmembrane transporter activity
LA341_07655	COG2197	response regulator
LA341_07670	COG0446	pyridine nucleotide-disulphide oxidoreductase
LA341_07675	COG0426	domain, Protein
LA341_07675	COG1773	rubredoxin
LA341_07680	COG3604	Transcriptional regulator
LA341_07685	COG2197	response regulator
LA341_07695	COG2855	membrane
LA341_07710	COG0589	response to stress
LA341_07715	COG0659	secondary active sulfate transmembrane transporter activity
LA341_07730	COG2916	Histone family protein nucleoid-structuring protein H-NS
LA341_07745	COG3621	Patatin-like phospholipase
LA341_07770	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LA341_07790	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LA341_07790	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LA341_07790	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LA341_07800	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LA341_07810	COG1187	pseudouridine synthase activity
LA341_07820	COG0482	sulfurtransferase activity
LA341_07825	COG2915	High frequency lysogenization protein hflD homolog
LA341_07830	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LA341_07835	COG2850	peptidyl-arginine hydroxylation
LA341_07845	COG3153	acetyltransferase
LA341_07850	COG0625	glutathione transferase activity
LA341_07855	COG0259	pyridoxamine-phosphate oxidase activity
LA341_07860	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LA341_07860	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LA341_07865	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
LA341_07890	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LA341_07895	COG1138	Cytochrome C-type biogenesis protein
LA341_07900	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
LA341_07905	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LA341_07910	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LA341_07915	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LA341_07920	COG4133	protoheme IX ABC transporter activity
LA341_07930	COG0835	chemotaxis
LA341_07940	COG1192	Involved in chromosome partitioning
LA341_07945	COG1360	Flagellar Motor Protein
LA341_07950	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LA341_07955	COG2201	protein-glutamate methylesterase activity
LA341_07960	COG0643	Histidine kinase
LA341_07960	COG0784	Response regulator, receiver
LA341_07960	COG2198	Histidine kinase
LA341_07965	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
LA341_07990	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LA341_08000	COG1684	flagellar biosynthetic protein fliR
LA341_08055	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LA341_08065	COG1677	Flagellar hook-basal body complex protein FliE
LA341_08080	COG0469	pyruvate kinase activity
LA341_08085	COG1737	Transcriptional regulator
LA341_08090	COG0837	glucose binding
LA341_08105	COG2233	PERMEase
LA341_08120	COG0281	malic enzyme
LA341_08130	COG0437	4 iron, 4 sulfur cluster binding
LA341_08135	COG3383	formate dehydrogenase (NAD+) activity
LA341_08135	COG3383	formate dehydrogenase (NAD+) activity
LA341_08170	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LA341_08175	COG1910	domain protein
LA341_08180	COG3852	Histidine kinase
LA341_08185	COG2204	response regulator
LA341_08195	COG4662	Binding-protein-dependent transport system inner membrane component
LA341_08205	COG0746	molybdenum cofactor guanylyltransferase activity
LA341_08210	COG0303	'Molybdopterin
LA341_08215	COG1289	transmembrane transporter activity
LA341_08250	COG3220	belongs to the UPF0276 family
LA341_08290	COG0784	Response regulator, receiver
LA341_08290	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LA341_08290	COG2198	Histidine kinase
LA341_08290	COG2205	protein histidine kinase activity
LA341_08300	COG0601	transmembrane transport
LA341_08305	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LA341_08310	COG0444	Belongs to the ABC transporter superfamily
LA341_08315	COG4608	Belongs to the ABC transporter superfamily
LA341_08325	COG2971	BadF BadG BcrA BcrD
LA341_08335	COG0840	transmembrane signaling receptor activity
LA341_08355	COG3724	N-succinylarginine dihydrolase activity
LA341_08380	COG0826	peptidase U32
LA341_08385	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LA341_08405	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
LA341_08410	COG3706	GGDEF domain
LA341_08415	COG2211	Major facilitator Superfamily
LA341_08420	COG0616	signal peptide processing
LA341_08425	COG1028	Short-chain dehydrogenase reductase Sdr
LA341_08430	COG0583	DNA-binding transcription factor activity
LA341_08440	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
LA341_08455	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LA341_08460	COG1881	PFAM PEBP family protein
LA341_08475	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LA341_08485	COG2877	3-deoxy-8-phosphooctulonate synthase activity
LA341_08490	COG2912	Transglutaminase-like superfamily
LA341_08500	COG2890	protein-(glutamine-N5) methyltransferase activity
LA341_08505	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LA341_08510	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
LA341_08515	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
LA341_08520	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
LA341_08530	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LA341_08535	COG0737	Belongs to the 5'-nucleotidase family
LA341_08540	COG0193	aminoacyl-tRNA hydrolase activity
LA341_08545	COG0012	GTP binding
LA341_08590	COG0471	metal ion transport
LA341_08590	COG0490	domain, Protein
LA341_08625	COG2214	Heat shock protein DnaJ domain protein
LA341_08630	COG0443	Heat shock 70 kDa protein
LA341_08640	COG0488	(ABC) transporter
LA341_08655	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LA341_08670	COG1012	belongs to the aldehyde dehydrogenase family
LA341_08680	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LA341_08695	COG0180	Tryptophanyl-tRNA synthetase
LA341_08705	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LA341_08710	COG0338	D12 class N6 adenine-specific DNA methyltransferase
LA341_08720	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
LA341_08725	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LA341_08755	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
LA341_08760	COG0583	DNA-binding transcription factor activity
LA341_08780	COG0583	DNA-binding transcription factor activity
LA341_08790	COG0739	heme binding
LA341_08800	COG3264	Mechanosensitive ion channel
LA341_08800	COG1511	domain protein
LA341_08805	COG0584	glycerophosphoryl diester phosphodiesterase
LA341_08815	COG1053	succinate dehydrogenase
LA341_08820	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LA341_08825	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
LA341_08830	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
LA341_08840	COG3366	ferrous iron transmembrane transporter activity
LA341_08845	COG0700	Nucleoside recognition
LA341_08850	COG2195	Cleaves the N-terminal amino acid of tripeptides
LA341_08860	COG3214	Protein conserved in bacteria
LA341_08885	COG0300	oxidoreductase activity
LA341_08900	COG0642	Histidine kinase
LA341_08905	COG4067	protein conserved in archaea
LA341_08905	COG0189	ligase activity
LA341_08910	COG0516	GMP reductase activity
LA341_08920	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LA341_08930	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LA341_08945	COG2199	diguanylate cyclase activity
LA341_08950	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LA341_08970	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LA341_08975	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LA341_08980	COG1702	phosphate starvation-inducible protein PhoH
LA341_08985	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LA341_08990	COG4535	Mg2 and Co2 transporter CorC
LA341_08995	COG0815	Transfers the fatty acyl group on membrane lipoproteins
LA341_09005	COG0789	Transcriptional regulator
LA341_09020	COG1970	mechanosensitive ion channel activity
LA341_09030	COG4974	Belongs to the 'phage' integrase family
LA341_09045	COG0312	modulator of DNA gyrase
LA341_09050	COG2888	peptidyl-tyrosine sulfation
LA341_09055	COG0495	leucyl-tRNA aminoacylation
LA341_09070	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LA341_09075	COG0799	negative regulation of ribosome biogenesis
LA341_09080	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LA341_09085	COG0768	penicillin binding
LA341_09090	COG0772	Belongs to the SEDS family
LA341_09095	COG2951	lytic endotransglycosylase activity
LA341_09100	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LA341_09105	COG1686	Belongs to the peptidase S11 family
LA341_09110	COG2921	Belongs to the UPF0250 family
LA341_09115	COG0321	lipoyl(octanoyl) transferase activity
LA341_09120	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
LA341_09140	COG3139	Protein of unknown function (DUF1315)
LA341_09145	COG0252	asparaginase activity
LA341_09150	COG0786	glutamate:sodium symporter activity
LA341_09165	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
LA341_09170	COG0384	phenazine biosynthesis protein PhzF
LA341_09175	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LA341_09180	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LA341_09185	COG0175	sulfate reduction
LA341_09190	COG2113	Glycine betaine
LA341_09195	COG4176	ABC-type proline glycine betaine transport system permease component
LA341_09200	COG4175	Glycine betaine
LA341_09215	COG2966	Psort location CytoplasmicMembrane, score
LA341_09225	COG0521	Mo-molybdopterin cofactor biosynthetic process
LA341_09240	COG1404	Belongs to the peptidase S8 family
LA341_09245	COG2897	thiosulfate sulfurtransferase activity
LA341_09250	COG2066	Belongs to the glutaminase family
LA341_09255	COG3171	Protein conserved in bacteria
LA341_09260	COG0220	tRNA (guanine-N7-)-methyltransferase activity
LA341_09265	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LA341_09270	COG1090	epimerase
LA341_09275	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
LA341_09280	COG4181	ATPase activity
LA341_09285	COG2755	lipolytic protein G-D-S-L family
LA341_09290	COG0835	chemotaxis
LA341_09290	COG0784	Response regulator, receiver
LA341_09335	COG2205	protein histidine kinase activity
LA341_09340	COG2814	Major facilitator Superfamily
LA341_09385	COG0748	coenzyme F420 binding
LA341_09390	COG3721	Heme iron utilization protein
LA341_09400	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LA341_09425	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LA341_09440	COG0737	Belongs to the 5'-nucleotidase family
LA341_09460	COG2204	response regulator
LA341_09465	COG0545	Peptidyl-prolyl cis-trans isomerase
LA341_09480	COG1047	Peptidyl-prolyl cis-trans
LA341_09485	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
LA341_09495	COG0835	chemotaxis
LA341_09495	COG0784	Response regulator, receiver
LA341_09500	COG0429	hydrolase of the alpha beta-hydrolase fold
LA341_09505	COG3089	Belongs to the UPF0270 family
LA341_09510	COG3954	Phosphoribulokinase
LA341_09525	COG1765	OsmC-like protein
LA341_09565	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LA341_09565	COG1522	sequence-specific DNA binding
LA341_09570	COG2313	pseudouridylate synthase activity
LA341_09605	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LA341_09620	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LA341_09665	COG1028	Short-chain dehydrogenase reductase Sdr
LA341_09670	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LA341_09680	COG1858	cytochrome C peroxidase
LA341_09700	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
LA341_09705	COG5001	Diguanylate cyclase
LA341_09705	COG3300	MHYT domain
LA341_09730	COG2985	domain, Protein
LA341_09730	COG0569	domain protein
LA341_09735	COG1272	protein, Hemolysin III
LA341_09740	COG0076	glutamate decarboxylase activity
LA341_09745	COG2917	probably involved in intracellular septation
LA341_09750	COG2350	Protein conserved in bacteria
LA341_09765	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
LA341_09770	COG1381	Involved in DNA repair and RecF pathway recombination
LA341_09780	COG0571	ribonuclease III activity
LA341_09785	COG0681	Belongs to the peptidase S26 family
LA341_09790	COG0481	GTPase activity
LA341_09805	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
LA341_09810	COG1595	DNA-templated transcription, initiation
LA341_09815	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LA341_09825	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
LA341_09835	COG0583	DNA-binding transcription factor activity
LA341_09865	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LA341_09875	COG0126	phosphoglycerate kinase activity
LA341_09880	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LA341_09885	COG1940	carbohydrate kinase activity
LA341_09890	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
LA341_09895	COG2816	NAD+ diphosphatase activity
LA341_09900	COG0506	proline dehydrogenase activity
LA341_09900	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LA341_09900	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LA341_09905	COG4991	sh3 domain protein
LA341_09910	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LA341_09920	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LA341_09925	COG0840	transmembrane signaling receptor activity
LA341_09935	COG1278	Cold shock
LA341_09975	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
LA341_09980	COG1162	GTPase activity
LA341_09985	COG0688	phosphatidylethanolamine metabolic process
LA341_09990	COG4628	conserved protein (DUF2132)
LA341_10000	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LA341_10005	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LA341_10015	COG1073	alpha beta
LA341_10020	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
LA341_10025	COG2195	Cleaves the N-terminal amino acid of tripeptides
LA341_10030	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
LA341_10035	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
LA341_10045	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
LA341_10055	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
LA341_10060	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
LA341_10065	COG2967	ApaG domain
LA341_10070	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
LA341_10080	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LA341_10085	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
LA341_10090	COG0318	PFAM AMP-dependent synthetase and ligase
LA341_10095	COG3314	Sporulation integral membrane protein YlbJ
LA341_10100	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LA341_10105	COG0211	Belongs to the bacterial ribosomal protein bL27 family
LA341_10110	COG0261	This protein binds to 23S rRNA in the presence of protein L20
LA341_10115	COG0142	geranyltranstransferase activity
LA341_10120	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
LA341_10125	COG0330	HflC and HflK could
LA341_10130	COG0330	HflC and HflK could
LA341_10135	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LA341_10140	COG1923	regulation of RNA biosynthetic process
LA341_10145	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LA341_10150	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LA341_10160	COG0802	atpase or kinase
LA341_10165	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LA341_10165	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
LA341_10185	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LA341_10190	COG2011	ABC-type metal ion transport system permease component
LA341_10195	COG1464	Belongs to the NlpA lipoprotein family
LA341_10200	COG0250	Participates in transcription elongation, termination and antitermination
LA341_10210	COG0784	Response regulator, receiver
LA341_10210	COG2205	protein histidine kinase activity
LA341_10225	COG5002	protein histidine kinase activity
LA341_10225	COG2198	Histidine kinase
LA341_10225	COG0784	Response regulator, receiver
LA341_10245	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
LA341_10250	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
LA341_10255	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
LA341_10260	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LA341_10265	COG2716	regulation of RNA biosynthetic process
LA341_10270	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LA341_10275	COG3013	Belongs to the UPF0304 family
LA341_10285	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LA341_10290	COG0857	belongs to the CobB CobQ family
LA341_10290	COG0280	phosphate acetyltransferase
LA341_10295	COG1555	photosystem II stabilization
LA341_10300	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LA341_10305	COG3104	oligopeptide transport
LA341_10310	COG0745	RESPONSE REGULATOR receiver
LA341_10340	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LA341_10355	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
LA341_10390	COG0440	acetolactate synthase activity
LA341_10395	COG0028	Belongs to the TPP enzyme family
LA341_10420	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LA341_10425	COG0473	3-isopropylmalate dehydrogenase activity
LA341_10430	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LA341_10435	COG0066	3-isopropylmalate dehydratase activity
LA341_10450	COG4143	(ABC) transporter
LA341_10455	COG1178	ABC-type Fe3 transport system permease component
LA341_10460	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
LA341_10470	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
LA341_10520	COG0459	protein refolding
LA341_10525	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LA341_10530	COG0534	Mate efflux family protein
LA341_10535	COG3030	protein affecting phage T7 exclusion by the F plasmid
LA341_10540	COG1027	Aspartate ammonia-lyase
LA341_10545	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LA341_10550	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LA341_10555	COG0828	Belongs to the bacterial ribosomal protein bS21 family
LA341_10560	COG1610	YqeY-like protein
LA341_10570	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LA341_10605	COG0561	phosphatase activity
LA341_10620	COG0733	neurotransmitter:sodium symporter activity
LA341_10630	COG0733	neurotransmitter:sodium symporter activity
LA341_10695	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
LA341_10700	COG2885	chlorophyll binding
LA341_10705	COG0823	Involved in the tonB-independent uptake of proteins
LA341_10720	COG0811	peptide transport
LA341_10725	COG0824	Thioesterase
LA341_10730	COG3790	cyd operon protein YbgE
LA341_10735	COG4890	Cyd operon protein YbgT
LA341_10740	COG1294	oxidase, subunit
LA341_10750	COG2255	four-way junction helicase activity
LA341_10755	COG0632	four-way junction helicase activity
LA341_10760	COG0840	transmembrane signaling receptor activity
LA341_10790	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
LA341_10795	COG3706	GGDEF domain
LA341_10795	COG4251	negative regulation of phosphorylation
LA341_10795	COG5001	Diguanylate cyclase
LA341_10795	COG2203	Gaf domain
LA341_10805	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LA341_10815	COG2995	paraquat-inducible protein a
LA341_10820	COG3008	intermembrane lipid transfer
LA341_10820	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LA341_10825	COG3009	Protein conserved in bacteria
LA341_10830	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LA341_10835	COG0442	prolyl-tRNA aminoacylation
LA341_10840	COG4221	oxidoreductase activity
LA341_10855	COG1024	Enoyl-CoA hydratase
LA341_10870	COG2204	response regulator
LA341_10875	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
LA341_10880	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
LA341_10885	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
LA341_10895	COG4166	transmembrane transport
LA341_10905	COG0840	transmembrane signaling receptor activity
LA341_10910	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LA341_10915	COG0735	belongs to the Fur family
LA341_10935	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
LA341_10940	COG0513	Belongs to the DEAD box helicase family
LA341_10945	COG2153	protein acetylation
LA341_10955	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LA341_10985	COG0557	exoribonuclease II activity
LA341_10990	COG3706	GGDEF domain
LA341_11000	COG3240	lipase activity
LA341_11005	COG3111	PFAM Bacterial OB fold (BOF) protein
LA341_11015	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
LA341_11020	COG1194	a g-specific adenine glycosylase
LA341_11025	COG0617	tRNA 3'-terminal CCA addition
LA341_11045	COG0347	Belongs to the P(II) protein family
LA341_11065	COG3022	response to hydroperoxide
LA341_11080	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LA341_11085	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LA341_11090	COG0762	integral membrane protein
LA341_11095	COG1872	DUF167
LA341_11105	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LA341_11110	COG0583	DNA-binding transcription factor activity
LA341_11125	COG1929	Belongs to the glycerate kinase type-1 family
LA341_11130	COG2610	gluconate transmembrane transporter activity
LA341_11135	COG3835	regulator
LA341_11140	COG3112	Uncharacterised protein family (UPF0231)
LA341_11155	COG0513	Belongs to the DEAD box helicase family
LA341_11180	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LA341_11185	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LA341_11195	COG1051	belongs to the nudix hydrolase family
LA341_11200	COG3066	DNA modification
LA341_11210	COG0335	large ribosomal subunit rRNA binding
LA341_11215	COG0336	Belongs to the RNA methyltransferase TrmD family
LA341_11220	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LA341_11225	COG0228	four-way junction DNA binding
LA341_11230	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LA341_11235	COG4137	Cytochrome C assembly protein
LA341_11240	COG4536	flavin adenine dinucleotide binding
LA341_11250	COG1017	nitric oxide dioxygenase activity
LA341_11250	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LA341_11255	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
LA341_11260	COG0039	L-malate dehydrogenase activity
LA341_11265	COG4160	amino acid transport
LA341_11270	COG4215	(ABC) transporter
LA341_11275	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LA341_11280	COG1126	abc transporter atp-binding protein
LA341_11285	COG1438	arginine binding
LA341_11290	COG2837	iron assimilation
LA341_11295	COG3842	ATPase activity
LA341_11305	COG1840	ABC-type Fe3 transport system, periplasmic component
LA341_11320	COG1448	Aminotransferase
LA341_11335	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LA341_11340	COG1328	CTP reductase activity
LA341_11355	COG0628	permease
LA341_11410	COG1215	transferase activity, transferring glycosyl groups
LA341_11415	COG0726	polysaccharide deacetylase
LA341_11415	COG1649	PFAM Uncharacterised BCR, COG1649
LA341_11445	COG0840	transmembrane signaling receptor activity
LA341_11450	COG3397	chitin binding
LA341_11455	COG0583	DNA-binding transcription factor activity
LA341_11460	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
LA341_11465	COG4208	sulfate ABC transporter
LA341_11470	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
LA341_11480	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
LA341_11485	COG3174	membrane
LA341_11490	COG0110	maltose O-acetyltransferase activity
LA341_11505	COG1011	Hydrolase
LA341_11510	COG0494	nUDIX hydrolase
LA341_11515	COG1218	3'(2'),5'-bisphosphate nucleotidase
LA341_11520	COG0814	amino acid
LA341_11525	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LA341_11535	COG0626	cystathionine gamma-synthase activity
LA341_11540	COG0460	homoserine dehydrogenase
LA341_11540	COG0527	aspartate kinase activity
LA341_11545	COG0306	phosphate transporter
LA341_11550	COG1392	Phosphate transport regulator
LA341_11560	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LA341_11565	COG2813	Specifically methylates the guanine in position
LA341_11570	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LA341_11575	COG0297	glycogen (starch) synthase activity
LA341_11615	COG1757	Na H antiporter
LA341_11620	COG0316	Belongs to the HesB IscA family
LA341_11630	COG0038	chloride channel
LA341_11635	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
LA341_11650	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LA341_11650	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LA341_11700	COG1396	sequence-specific DNA binding
LA341_11705	COG3135	benzoate transporter
LA341_11725	COG0840	transmembrane signaling receptor activity
LA341_11730	COG3047	cAMP biosynthetic process
LA341_11740	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LA341_11755	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LA341_11760	COG1278	Cold shock
LA341_11765	COG2252	PERMEase
LA341_11770	COG2376	Dihydroxyacetone kinase
LA341_11775	COG1461	Dihydroxyacetone kinase
LA341_11780	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LA341_11780	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LA341_11780	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
LA341_11790	COG3284	Transcriptional regulator
LA341_11810	COG0628	permease
LA341_11830	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LA341_11855	COG0456	acetyltransferase
LA341_11860	COG3133	Outer membrane lipoprotein
LA341_11865	COG0004	ammonium transporteR
LA341_11870	COG1733	regulation of RNA biosynthetic process
LA341_11880	COG3932	Exopolysaccharide synthesis, ExoD
LA341_11885	COG0814	amino acid
LA341_11905	COG2199	diguanylate cyclase activity
LA341_11905	COG2203	Gaf domain
LA341_11930	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
LA341_11935	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LA341_11955	COG0477	Major facilitator Superfamily
LA341_11960	COG0523	cobalamin synthesis protein
LA341_12000	COG0477	Major facilitator Superfamily
LA341_12015	COG0312	modulator of DNA gyrase
LA341_12020	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LA341_12025	COG3164	Protein of unknown function
LA341_12030	COG1530	ribonuclease E activity
LA341_12035	COG0424	maF-like protein
LA341_12040	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
LA341_12045	COG1792	Involved in formation and maintenance of cell shape
LA341_12050	COG1077	Cell shape determining protein MreB Mrl
LA341_12080	COG2165	general secretion pathway protein
LA341_12085	COG2165	general secretion pathway protein
LA341_12095	COG1459	type II secretion system
LA341_12100	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LA341_12145	COG2200	EAL domain
LA341_12145	COG2199	diguanylate cyclase activity
LA341_12155	COG2200	EAL domain
LA341_12160	COG0387	Pfam Sodium calcium exchanger
LA341_12165	COG2986	histidine ammonia-lyase
LA341_12170	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
LA341_12175	COG0010	Belongs to the arginase family
LA341_12180	COG1228	amidohydrolase
LA341_12185	COG3314	Sporulation integral membrane protein YlbJ
LA341_12195	COG0288	reversible hydration of carbon dioxide
LA341_12205	COG2177	Part of the ABC transporter FtsEX involved in
LA341_12210	COG2884	Cell division ATP-binding protein ftsE
LA341_12215	COG0552	protein localization to endoplasmic reticulum
LA341_12220	COG0742	ribosomal rna small subunit methyltransferase
LA341_12245	COG2249	NAD(P)H dehydrogenase (quinone) activity
LA341_12250	COG0583	DNA-binding transcription factor activity
LA341_12255	COG4221	oxidoreductase activity
LA341_12270	COG1770	oligopeptidase
LA341_12285	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LA341_12290	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
LA341_12300	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LA341_12310	COG2095	MarC family integral membrane protein
LA341_12320	COG1301	dicarboxylic acid transport
LA341_12345	COG3714	YhhN family
LA341_12395	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LA341_12400	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LA341_12405	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LA341_12410	COG0049	tRNA binding
LA341_12415	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LA341_12420	COG2168	tRNA wobble position uridine thiolation
LA341_12425	COG2923	Belongs to the DsrF TusC family
LA341_12440	COG2964	Protein conserved in bacteria
LA341_12445	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LA341_12450	COG0085	RNA polymerase activity
LA341_12455	COG0222	ribosome binding
LA341_12460	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LA341_12465	COG0081	regulation of translation
LA341_12470	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LA341_12475	COG0250	Participates in transcription elongation, termination and antitermination
LA341_12490	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LA341_12520	COG0812	UDP-N-acetylmuramate dehydrogenase activity
LA341_12525	COG0569	domain protein
LA341_12530	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LA341_12560	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LA341_12560	COG4191	Histidine kinase
LA341_12565	COG3005	denitrification pathway
LA341_12570	COG0243	molybdopterin cofactor binding
LA341_12615	COG2204	response regulator
LA341_12625	COG2205	protein histidine kinase activity
LA341_12640	COG1028	Short-chain dehydrogenase reductase Sdr
LA341_12645	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
LA341_12645	COG0517	IMP dehydrogenase activity
LA341_12645	COG0617	tRNA 3'-terminal CCA addition
LA341_12650	COG5413	integral membrane protein
LA341_12660	COG1522	sequence-specific DNA binding
LA341_12665	COG2502	aspartate--ammonia ligase
LA341_12670	COG0542	response to heat
LA341_12680	COG0564	pseudouridine synthase activity
LA341_12685	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LA341_12690	COG0446	pyridine nucleotide-disulphide oxidoreductase
LA341_12700	COG3681	Belongs to the UPF0597 family
LA341_12705	COG4974	Belongs to the 'phage' integrase family
LA341_12775	COG5002	protein histidine kinase activity
LA341_12775	COG2176	DNA-directed DNA polymerase activity
LA341_12805	COG4695	Portal protein
LA341_12860	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
LA341_12935	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
LA341_12940	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
LA341_12945	COG1979	alcohol dehydrogenase
LA341_12950	COG2207	Transcriptional regulator
LA341_12955	COG3040	lipid binding
LA341_12975	COG0540	Belongs to the ATCase OTCase family
LA341_12980	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
LA341_12985	COG1438	arginine binding
LA341_12990	COG1288	antiporter activity
LA341_12995	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LA341_13025	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LA341_13035	COG3078	GTPase activator activity
LA341_13045	COG0218	Necessary for normal cell division and for the maintenance of normal septation
LA341_13055	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LA341_13060	COG0408	coproporphyrinogen oxidase activity
LA341_13065	COG0009	L-threonylcarbamoyladenylate synthase
LA341_13070	COG0551	DNA topoisomerase type I activity
LA341_13075	COG2922	Belongs to the Smg family
LA341_13080	COG0758	DNA mediated transformation
LA341_13085	COG1652	LysM domain
LA341_13090	COG0242	peptide deformylase activity
LA341_13095	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LA341_13100	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LA341_13100	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LA341_13105	COG0569	domain protein
LA341_13110	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LA341_13115	COG1217	gtp-binding protein TYPA
LA341_13120	COG0174	glutamine synthetase
LA341_13130	COG3852	Histidine kinase
LA341_13135	COG2204	response regulator
LA341_13140	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LA341_13170	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LA341_13180	COG0519	Catalyzes the synthesis of GMP from XMP
LA341_13180	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LA341_13190	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LA341_13195	COG1396	sequence-specific DNA binding
LA341_13200	COG1012	belongs to the aldehyde dehydrogenase family
LA341_13210	COG2962	Rard protein
LA341_13220	COG1280	lysine exporter protein (LysE YggA)
LA341_13225	COG2391	methyltransferase activity
LA341_13235	COG1309	transcriptional regulator
LA341_13250	COG0129	dihydroxy-acid dehydratase activity
LA341_13260	COG3978	acetolactate synthase activity
LA341_13270	COG0606	chelatase, subunit chli
LA341_13275	COG0204	Acyl-transferase
LA341_13280	COG0204	Acyl-transferase
LA341_13285	COG1683	Conserved Protein
LA341_13295	COG1335	isochorismatase
LA341_13305	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
LA341_13310	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
LA341_13315	COG3639	organic phosphonate transmembrane transporter activity
LA341_13320	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LA341_13325	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LA341_13335	COG3084	Protein conserved in bacteria
LA341_13340	COG2203	Gaf domain
LA341_13340	COG3706	GGDEF domain
LA341_13340	COG4251	negative regulation of phosphorylation
LA341_13340	COG5001	Diguanylate cyclase
LA341_13345	COG0789	Transcriptional regulator
LA341_13355	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LA341_13365	COG1561	YicC-like family, N-terminal region
LA341_13370	COG0583	DNA-binding transcription factor activity
LA341_13390	COG1262	PFAM Formylglycine-generating sulfatase enzyme
LA341_13395	COG0385	Bile acid
LA341_13400	COG0531	amino acid
LA341_13405	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LA341_13410	COG0531	amino acid
LA341_13415	COG2731	YhcH YjgK YiaL family protein
LA341_13420	COG3250	beta-galactosidase activity
LA341_13425	COG1609	Transcriptional regulator
LA341_13460	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LA341_13465	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LA341_13465	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LA341_13470	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
LA341_13475	COG3074	FtsZ-dependent cytokinesis
LA341_13485	COG1045	serine acetyltransferase
LA341_13495	COG0745	RESPONSE REGULATOR receiver
LA341_13500	COG2205	protein histidine kinase activity
LA341_13505	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LA341_13510	COG0534	Mate efflux family protein
LA341_13520	COG1079	Belongs to the binding-protein-dependent transport system permease family
LA341_13525	COG4603	Belongs to the binding-protein-dependent transport system permease family
LA341_13530	COG3845	ABC transporter
LA341_13535	COG1744	ABC transporter substrate-binding protein PnrA-like
LA341_13540	COG0210	DNA helicase
LA341_13620	COG3306	glycosyltransferase involved in LPS biosynthesis
LA341_13625	COG0438	transferase activity, transferring glycosyl groups
LA341_13640	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LA341_13650	COG0156	8-amino-7-oxononanoate synthase activity
LA341_13655	COG1063	alcohol dehydrogenase
LA341_13660	COG3245	cytochrome
LA341_13675	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LA341_13680	COG2166	iron-sulfur cluster assembly
LA341_13685	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LA341_13720	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
LA341_13725	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LA341_13730	COG1739	Uncharacterized protein family UPF0029
LA341_13735	COG0006	proline dipeptidase activity
LA341_13740	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LA341_13745	COG1250	3-hydroxyacyl-CoA dehydrogenase
LA341_13745	COG1024	Enoyl-CoA hydratase
LA341_13750	COG0183	Belongs to the thiolase family
LA341_13775	COG0425	Belongs to the sulfur carrier protein TusA family
LA341_13780	COG0251	oxidation-reduction process
LA341_13785	COG2885	chlorophyll binding
LA341_13790	COG2818	Glycosylase
LA341_13795	COG0752	glycyl-tRNA synthetase alpha subunit
LA341_13800	COG0751	glycine-tRNA ligase activity
LA341_13820	COG0814	amino acid
LA341_13825	COG0348	domain, Protein
LA341_13830	COG1609	Transcriptional regulator
LA341_13835	COG0683	leucine binding
LA341_13870	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LA341_13880	COG2960	long-chain fatty acid transporting porin activity
LA341_13890	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LA341_13910	COG2205	protein histidine kinase activity
LA341_13915	COG0745	RESPONSE REGULATOR receiver
LA341_13920	COG2814	Major facilitator Superfamily
LA341_13935	COG3977	Valine--pyruvate aminotransferase
LA341_13940	COG0071	Belongs to the small heat shock protein (HSP20) family
LA341_13945	COG0071	Belongs to the small heat shock protein (HSP20) family
LA341_13960	COG0592	DNA-directed DNA polymerase activity
LA341_13965	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LA341_13980	COG1126	abc transporter atp-binding protein
LA341_13985	COG0230	Belongs to the bacterial ribosomal protein bL34 family
LA341_13990	COG0594	ribonuclease P activity
LA341_13995	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
LA341_14000	COG0706	membrane insertase activity
LA341_14005	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LA341_14010	COG1280	lysine exporter protein (LysE YggA)
LA341_14030	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LA341_14035	COG1120	ATPase activity
LA341_14040	COG4615	Cyclic peptide transporter
LA341_14045	COG4774	siderophore transport
LA341_14050	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LA341_14055	COG0445	tRNA wobble uridine modification
LA341_14060	COG0357	Ribosomal RNA small subunit methyltransferase G
LA341_14065	COG1192	Involved in chromosome partitioning
LA341_14070	COG1475	DNA binding
LA341_14080	COG0356	it plays a direct role in the translocation of protons across the membrane
LA341_14090	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LA341_14095	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LA341_14100	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LA341_14105	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LA341_14110	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LA341_14115	COG0355	proton-transporting ATP synthase activity, rotational mechanism
LA341_14120	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LA341_14125	COG4452	Inner membrane protein CreD
LA341_14130	COG2205	protein histidine kinase activity
LA341_14135	COG0745	RESPONSE REGULATOR receiver
LA341_14140	COG1349	DNA-binding transcription factor activity
LA341_14150	COG2771	luxR family
LA341_14160	COG0811	peptide transport
LA341_14165	COG0811	peptide transport
LA341_14170	COG0848	biopolymer transport protein
LA341_14175	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
LA341_14210	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
LA341_14215	COG0402	S-adenosylhomocysteine deaminase activity
LA341_14220	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LA341_14230	COG3165	ubiquinone biosynthetic process from chorismate
LA341_14235	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
LA341_14245	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LA341_14250	COG0805	protein transport
LA341_14255	COG0084	hydrolase, TatD family'
LA341_14275	COG0742	ribosomal rna small subunit methyltransferase
LA341_14285	COG0248	Ppx GppA phosphatase
LA341_14290	COG0513	Belongs to the DEAD box helicase family
LA341_14295	COG3118	belongs to the thioredoxin family
LA341_14310	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
LA341_14320	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LA341_14325	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LA341_14330	COG1309	transcriptional regulator
LA341_14360	COG0469	pyruvate kinase activity
LA341_14365	COG2271	Major facilitator Superfamily
LA341_14395	COG0561	phosphatase activity
LA341_14400	COG2267	carboxylic ester hydrolase activity
LA341_14410	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LA341_14415	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LA341_14420	COG1758	RNA polymerase activity
LA341_14430	COG0859	PFAM glycosyl transferase family 9
LA341_14435	COG3642	lipopolysaccharide core region biosynthetic process
LA341_14475	COG0589	response to stress
LA341_14480	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
LA341_14485	COG1528	Iron-storage protein
LA341_14490	COG2081	HI0933 family
LA341_14500	COG3275	phosphorelay sensor kinase activity
LA341_14505	COG3279	Response regulator of the LytR AlgR family
LA341_14510	COG2223	nitrite transmembrane transporter activity
LA341_14515	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LA341_14520	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LA341_14535	COG0583	DNA-binding transcription factor activity
LA341_14545	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
LA341_14595	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LA341_14600	COG0166	Belongs to the GPI family
LA341_14605	COG0668	transmembrane transport
LA341_14610	COG1309	transcriptional regulator
LA341_14615	COG0756	dUTP diphosphatase activity
LA341_14620	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LA341_14625	COG2003	Belongs to the UPF0758 family
LA341_14630	COG0227	Belongs to the bacterial ribosomal protein bL28 family
LA341_14635	COG0267	Belongs to the bacterial ribosomal protein bL33 family
LA341_14645	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
LA341_14650	COG2990	Protein conserved in bacteria
LA341_14655	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LA341_14660	COG0859	PFAM glycosyl transferase family 9
LA341_14665	COG0463	Glycosyl transferase, family 2
LA341_14670	COG0859	PFAM glycosyl transferase family 9
LA341_14675	COG1519	Transferase
LA341_14680	COG0604	alcohol dehydrogenase
LA341_14695	COG1580	Controls the rotational direction of flagella during chemotaxis
LA341_14700	COG3161	chorismate lyase activity
LA341_14705	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
LA341_14710	COG2937	Belongs to the GPAT DAPAT family
LA341_14715	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LA341_14725	COG2239	Acts as a magnesium transporter
LA341_14730	COG1648	precorrin-2 dehydrogenase activity
LA341_14730	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LA341_14735	COG2116	formate transmembrane transporter activity
LA341_14750	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LA341_14755	COG0842	Transport permease protein
LA341_14760	COG0842	Transport permease protein
LA341_14765	COG1131	(ABC) transporter
LA341_14770	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LA341_14780	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LA341_14785	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LA341_14795	COG0018	arginyl-trna synthetase
LA341_14800	COG1968	undecaprenyl-diphosphatase activity
LA341_14805	COG2017	converts alpha-aldose to the beta-anomer
LA341_14810	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
LA341_14815	COG1085	galactose-1-phosphate uridylyltransferase
LA341_14820	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LA341_14825	COG1609	Transcriptional regulator
LA341_14830	COG3250	beta-galactosidase activity
LA341_14850	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LA341_14865	COG0366	Alpha amylase catalytic
LA341_14880	COG4310	Domain of unknown function (DUF2172)
LA341_14890	COG0443	Heat shock 70 kDa protein
LA341_14895	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LA341_14900	COG1028	Short-chain dehydrogenase reductase Sdr
LA341_14905	COG3045	CreA protein
LA341_14920	COG0174	glutamine synthetase
LA341_14940	COG3842	ATPase activity
LA341_14945	COG1176	ABC-type spermidine putrescine transport system, permease component I
LA341_14950	COG1177	transmembrane transport
LA341_14955	COG2258	MOSC domain
LA341_14970	COG2050	protein possibly involved in aromatic compounds catabolism
LA341_14975	COG0514	ATP-dependent DNA helicase (RecQ)
LA341_14985	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
LA341_14995	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
LA341_15000	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LA341_15010	COG0254	rRNA binding
LA341_15015	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LA341_15025	COG0702	epimerase
LA341_15030	COG0281	malic enzyme
LA341_15035	COG1295	ribonuclease BN
LA341_15040	COG1490	D-aminoacyl-tRNA deacylase activity
LA341_15045	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
LA341_15050	COG0456	acetyltransferase
LA341_15060	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LA341_15065	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LA341_15070	COG2610	gluconate transmembrane transporter activity
LA341_15075	COG3265	gluconokinase activity
LA341_15080	COG0129	dihydroxy-acid dehydratase activity
LA341_15085	COG0800	Aldolase
LA341_15090	COG1609	Transcriptional regulator
LA341_15100	COG4942	peptidase
LA341_15105	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LA341_15110	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LA341_15115	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
LA341_15120	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
LA341_15125	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
LA341_15125	COG0316	Belongs to the HesB IscA family
LA341_15130	COG1040	competence protein
LA341_15135	COG0596	Alpha beta hydrolase
LA341_15155	COG2183	response to ionizing radiation
LA341_15160	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LA341_15170	COG2205	protein histidine kinase activity
LA341_15180	COG0051	transcription antitermination factor activity, RNA binding
LA341_15185	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LA341_15190	COG0088	Forms part of the polypeptide exit tunnel
LA341_15195	COG0089	rRNA binding
LA341_15200	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LA341_15205	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LA341_15210	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LA341_15215	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LA341_15220	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LA341_15225	COG0255	Belongs to the universal ribosomal protein uL29 family
LA341_15230	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LA341_15235	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LA341_15240	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LA341_15245	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LA341_15250	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LA341_15255	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LA341_15260	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LA341_15265	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LA341_15270	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LA341_15275	COG1841	ribosomal large subunit assembly
LA341_15280	COG0200	Binds to the 23S rRNA
LA341_15285	COG0201	protein transport
LA341_15290	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LA341_15295	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LA341_15300	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LA341_15305	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LA341_15310	COG0202	RNA polymerase activity
LA341_15315	COG0203	ribosomal protein L17
LA341_15345	COG4771	TonB-dependent receptor
LA341_15365	COG0583	DNA-binding transcription factor activity
LA341_15375	COG1741	Belongs to the pirin family
LA341_15380	COG2259	Doxx family
LA341_15385	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
LA341_15390	COG1074	ATP-dependent DNA helicase activity
LA341_15395	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LA341_15415	COG0346	lactoylglutathione lyase activity
LA341_15430	COG3069	C4-dicarboxylate transmembrane transporter activity
LA341_15455	COG1175	transmembrane transport
LA341_15465	COG3842	ATPase activity
LA341_15475	COG2199	diguanylate cyclase activity
LA341_15475	COG2203	Gaf domain
LA341_15490	COG2873	o-acetylhomoserine
LA341_15500	COG4533	DNA binding
LA341_15520	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LA341_15545	COG0753	catalase activity
LA341_15550	COG1247	-acetyltransferase
LA341_15570	COG2927	DNA polymerase III (CHI subunit)
LA341_15575	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LA341_15580	COG0795	lipopolysaccharide-transporting ATPase activity
LA341_15585	COG0795	lipopolysaccharide-transporting ATPase activity
LA341_15615	COG1686	Belongs to the peptidase S11 family
LA341_15625	COG1494	fructose-1,6-bisphosphatase
LA341_15640	COG2959	enzyme of heme biosynthesis
LA341_15650	COG0181	hydroxymethylbilane synthase activity
LA341_15655	COG3072	Adenylate cyclase
LA341_15660	COG0400	carboxylic ester hydrolase activity
LA341_15665	COG1965	Belongs to the frataxin family
LA341_15675	COG0019	diaminopimelate decarboxylase activity
LA341_15680	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
LA341_15695	COG1011	Hydrolase
LA341_15700	COG0668	transmembrane transport
LA341_15710	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
LA341_15715	COG3028	Belongs to the UPF0307 family
LA341_15720	COG0312	modulator of DNA gyrase
LA341_15725	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LA341_15730	COG5007	Belongs to the BolA IbaG family
LA341_15740	COG2854	intermembrane phospholipid transfer
LA341_15745	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LA341_15750	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LA341_15755	COG1127	ABC transporter
LA341_15760	COG0517	IMP dehydrogenase activity
LA341_15760	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
LA341_15765	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
LA341_15770	COG3117	lipopolysaccharide transmembrane transporter activity
LA341_15775	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
LA341_15780	COG1137	ATPase activity
LA341_15785	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
LA341_15795	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LA341_15800	COG1660	Displays ATPase and GTPase activities
LA341_15805	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LA341_15810	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LA341_15815	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LA341_15825	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
LA341_15830	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LA341_15835	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LA341_15840	COG0723	plastoquinol--plastocyanin reductase activity
LA341_15845	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
LA341_15850	COG2857	Cytochrome c1
LA341_15855	COG0625	glutathione transferase activity
LA341_15860	COG2969	positive regulation of protein catabolic process
LA341_15865	COG2823	Periplasmic or secreted lipoprotein
LA341_15870	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
LA341_15875	COG0792	nuclease activity
LA341_15880	COG3107	peptidoglycan biosynthetic process
LA341_15885	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LA341_15910	COG1987	bacterial-type flagellum assembly
LA341_15935	COG1677	Flagellar hook-basal body complex protein FliE
LA341_15945	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LA341_15980	COG1815	bacterial-type flagellum-dependent cell motility
LA341_15995	COG1749	Flagellar hook protein flgE
LA341_16005	COG4786	Flagellar basal body rod
LA341_16010	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
LA341_16015	COG1706	bacterial-type flagellum-dependent cell motility
LA341_16025	COG1256	bacterial-type flagellum assembly
LA341_16025	COG4786	Flagellar basal body rod
LA341_16050	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LA341_16055	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
LA341_16080	COG1191	sigma factor activity
LA341_16085	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LA341_16100	COG0741	lytic transglycosylase activity
LA341_16100	COG1388	LysM domain
LA341_16110	COG2001	Belongs to the MraZ family
LA341_16115	COG0275	rRNA processing
LA341_16120	COG3116	cell division
LA341_16125	COG0768	penicillin binding
LA341_16130	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LA341_16135	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LA341_16140	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LA341_16145	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LA341_16150	COG0772	Belongs to the SEDS family
LA341_16155	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LA341_16160	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LA341_16165	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
LA341_16170	COG0849	cell division
LA341_16175	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LA341_16180	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
LA341_16190	COG0653	protein targeting
LA341_16200	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
LA341_16205	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
LA341_16215	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
LA341_16220	COG1459	type II secretion system
LA341_16225	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LA341_16250	COG2186	Transcriptional regulator
LA341_16255	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
LA341_16260	COG0508	dehydrogenase complex catalyzes the overall conversion of
LA341_16265	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LA341_16275	COG0840	transmembrane signaling receptor activity
LA341_16280	COG1752	Esterase of the alpha-beta hydrolase superfamily
LA341_16285	COG1049	propionate catabolic process, 2-methylcitrate cycle
LA341_16290	COG2200	EAL domain
LA341_16295	COG2200	EAL domain
LA341_16305	COG0646	methionine synthase
LA341_16305	COG1410	methionine synthase
LA341_16310	COG0189	ligase activity
LA341_16315	COG0642	Histidine kinase
LA341_16320	COG0745	RESPONSE REGULATOR receiver
LA341_16340	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
LA341_16345	COG0352	thiamine-phosphate diphosphorylase activity
LA341_16350	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LA341_16360	COG2022	thiamine diphosphate biosynthetic process
LA341_16365	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
LA341_16395	COG0110	maltose O-acetyltransferase activity
LA341_16400	COG3314	Sporulation integral membrane protein YlbJ
LA341_16420	COG0165	Argininosuccinate lyase
LA341_16425	COG0137	argininosuccinate synthase activity
LA341_16435	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
LA341_16440	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LA341_16450	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LA341_16455	COG0406	alpha-ribazole phosphatase activity
LA341_16460	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LA341_16470	COG0583	DNA-binding transcription factor activity
LA341_16475	COG1380	Effector of murein hydrolase LrgA
LA341_16480	COG1346	cytolysis
LA341_16490	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LA341_16495	COG1546	Belongs to the CinA family
LA341_16500	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LA341_16510	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LA341_16515	COG0527	aspartate kinase activity
LA341_16520	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
LA341_16555	COG1686	Belongs to the peptidase S11 family
LA341_16560	COG0586	Pfam SNARE associated Golgi protein
LA341_16565	COG1253	flavin adenine dinucleotide binding
LA341_16570	COG0252	asparaginase activity
LA341_16590	COG1263	PTS System
LA341_16590	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LA341_16595	COG0366	Alpha amylase catalytic
LA341_16600	COG0110	maltose O-acetyltransferase activity
LA341_16610	COG0564	pseudouridine synthase activity
LA341_16615	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LA341_16645	COG2926	Belongs to the UPF0265 family
LA341_16655	COG0561	phosphatase activity
LA341_16665	COG1058	Belongs to the CinA family
LA341_16665	COG1546	Belongs to the CinA family
LA341_16670	COG1418	mRNA catabolic process
LA341_16675	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
LA341_16685	COG1522	sequence-specific DNA binding
LA341_16690	COG1368	sulfuric ester hydrolase activity
LA341_16720	COG4221	oxidoreductase activity
LA341_16735	COG1979	alcohol dehydrogenase
LA341_16740	COG1803	Methylglyoxal synthase
LA341_16760	COG1444	tRNA N-acetyltransferase activity
LA341_16765	COG2949	membrane
LA341_16770	COG3291	Pkd domain containing protein
LA341_16780	COG1441	menaquinone biosynthetic process
LA341_16785	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
LA341_16790	COG0596	Alpha beta hydrolase
LA341_16795	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
LA341_16800	COG1169	isochorismate synthase
LA341_16805	COG1575	Belongs to the MenA family. Type 1 subfamily
LA341_16830	COG0513	Belongs to the DEAD box helicase family
LA341_16835	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LA341_16840	COG1988	membrane-bound metal-dependent
LA341_16855	COG1671	Belongs to the UPF0178 family
LA341_16875	COG0484	heat shock protein binding
LA341_16885	COG3722	fumarate hydratase activity
LA341_16890	COG0246	Mannitol dehydrogenase
LA341_16895	COG2213	PTS system mannitol-specific
LA341_16895	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LA341_16900	COG1560	Kdo2-lipid A biosynthetic process
LA341_16905	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
LA341_16905	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
LA341_16910	COG1538	Outer membrane efflux protein
LA341_16915	COG0494	nUDIX hydrolase
LA341_16920	COG3151	Protein conserved in bacteria
LA341_16930	COG3150	esterase
LA341_16935	COG1051	belongs to the nudix hydrolase family
LA341_16945	COG0187	DNA topoisomerase II activity
LA341_16950	COG2329	Antibiotic biosynthesis monooxygenase
LA341_16985	COG0814	amino acid
LA341_17015	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LA341_17035	COG0204	Acyl-transferase
LA341_17040	COG1842	Phage shock protein A
LA341_17055	COG2827	Endonuclease containing a URI domain
LA341_17065	COG2962	Rard protein
LA341_17070	COG1573	uracil-dna glycosylase
LA341_17075	COG0697	spore germination
LA341_17080	COG0583	DNA-binding transcription factor activity
LA341_17085	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LA341_17090	COG1121	(ABC) transporter
LA341_17095	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
LA341_17115	COG0739	heme binding
LA341_17125	COG3068	Protein conserved in bacteria
LA341_17130	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LA341_17140	COG0583	DNA-binding transcription factor activity
LA341_17145	COG0640	Transcriptional regulator
LA341_17150	COG0268	Binds directly to 16S ribosomal RNA
LA341_17155	COG0728	peptidoglycan biosynthetic process
LA341_17160	COG0196	riboflavin kinase activity
LA341_17165	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LA341_17170	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LA341_17175	COG1047	Peptidyl-prolyl cis-trans
LA341_17180	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
LA341_17240	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LA341_17240	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LA341_17255	COG1854	S-ribosylhomocysteine lyase activity
LA341_17260	COG2165	general secretion pathway protein
LA341_17265	COG0084	hydrolase, TatD family'
LA341_17270	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LA341_17280	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LA341_17285	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
LA341_17290	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
LA341_17295	COG0813	purine-nucleoside phosphorylase activity
LA341_17300	COG5002	protein histidine kinase activity
LA341_17300	COG5001	Diguanylate cyclase
LA341_17300	COG3447	MASE1 domain protein
LA341_17310	COG0560	Phosphoserine phosphatase
LA341_17340	COG0776	regulation of translation
LA341_17345	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LA341_17350	COG1914	H( )-stimulated, divalent metal cation uptake system
LA341_17355	COG0360	Binds together with S18 to 16S ribosomal RNA
LA341_17360	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LA341_17365	COG0359	binds to the 23S rRNA
LA341_17370	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LA341_17400	COG1064	alcohol dehydrogenase
LA341_17405	COG1238	metal cluster binding
LA341_17410	COG0612	Peptidase, M16
LA341_17415	COG2918	glutathione biosynthetic process
LA341_17425	COG1022	Amp-dependent synthetase and ligase
LA341_17435	COG0456	acetyltransferase
LA341_17455	COG2425	protein containing a von Willebrand factor type A (vWA) domain
LA341_17460	COG3300	MHYT domain
LA341_17460	COG5001	Diguanylate cyclase
LA341_17480	COG0456	acetyltransferase
LA341_17485	COG0456	acetyltransferase
LA341_17490	COG0477	Major facilitator Superfamily
LA341_17495	COG0583	DNA-binding transcription factor activity
LA341_17500	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LA341_17505	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LA341_17515	COG0673	inositol 2-dehydrogenase activity
LA341_17525	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LA341_17530	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LA341_17535	COG3036	rescue of stalled ribosome
LA341_17550	COG0138	bifunctional purine biosynthesis protein purh
LA341_17565	COG0494	nUDIX hydrolase
LA341_17585	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LA341_17590	COG1640	4-alpha-glucanotransferase
LA341_17595	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LA341_17605	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
LA341_17610	COG1585	Membrane protein implicated in regulation of membrane protease activity
LA341_17615	COG0330	HflC and HflK could
LA341_17620	COG1648	precorrin-2 dehydrogenase activity
LA341_17620	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LA341_17625	COG0175	sulfate reduction
LA341_17630	COG2895	sulfate adenylyltransferase (ATP) activity
LA341_17635	COG0471	metal ion transport
LA341_17635	COG3273	potassium ion transport
LA341_17640	COG0529	Catalyzes the synthesis of activated sulfate
LA341_17670	COG1136	(ABC) transporter
LA341_17685	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
LA341_17700	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
LA341_17705	COG0346	lactoylglutathione lyase activity
LA341_17710	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LA341_17715	COG1643	Atp-dependent helicase
LA341_17720	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
LA341_17725	COG1489	DNA binding
LA341_17730	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
LA341_17735	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LA341_17750	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
LA341_17755	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
LA341_17770	COG0842	Transport permease protein
LA341_17775	COG1131	(ABC) transporter
LA341_17790	COG0163	prenyltransferase activity
LA341_17795	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LA341_17800	COG0671	phosphoesterase, PA-phosphatase related
LA341_17805	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LA341_17810	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LA341_17815	COG1151	hydroxylamine reductase activity
LA341_17820	COG0783	Belongs to the Dps family
LA341_17825	COG3023	N-Acetylmuramoyl-L-alanine amidase
LA341_17830	COG4807	Protein conserved in bacteria
LA341_17840	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LA341_17845	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LA341_17850	COG3956	TIGRFAM MazG family protein
LA341_17855	COG0504	CTP synthase activity
LA341_17860	COG0148	phosphopyruvate hydratase activity
LA341_17920	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
LA341_17930	COG0488	(ABC) transporter
LA341_17935	COG0517	IMP dehydrogenase activity
LA341_17935	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
LA341_17945	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LA341_17960	COG1794	racemase activity, acting on amino acids and derivatives
LA341_17965	COG2132	Multicopper oxidase
LA341_17975	COG2731	YhcH YjgK YiaL family protein
LA341_17985	COG0668	transmembrane transport
LA341_17990	COG1376	ErfK ybiS ycfS ynhG family protein
LA341_17995	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LA341_18000	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
LA341_18005	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
LA341_18015	COG0585	pseudouridine synthase activity
LA341_18020	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
LA341_18025	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
LA341_18030	COG1238	metal cluster binding
LA341_18035	COG4942	peptidase
LA341_18035	COG1388	LysM domain
LA341_18045	COG1902	pentaerythritol trinitrate reductase activity
LA341_18060	COG2957	Belongs to the agmatine deiminase family
LA341_18065	COG0154	amidase activity
LA341_18085	COG0513	Belongs to the DEAD box helicase family
LA341_18090	COG2203	Gaf domain
LA341_18090	COG2199	diguanylate cyclase activity
LA341_18100	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
LA341_18120	COG2070	2-Nitropropane dioxygenase
LA341_18150	COG2982	Protein involved in outer membrane biogenesis
LA341_18155	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
LA341_18165	COG2252	PERMEase
LA341_18175	COG0488	(ABC) transporter
LA341_18180	COG0741	lytic transglycosylase activity
LA341_18185	COG0463	Glycosyl transferase, family 2
LA341_18195	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LA341_18215	COG4608	Belongs to the ABC transporter superfamily
LA341_18220	COG0444	Belongs to the ABC transporter superfamily
LA341_18230	COG4239	(ABC) transporter, permease
LA341_18235	COG4174	ABC transporter (Permease)
LA341_18245	COG0616	signal peptide processing
LA341_18250	COG0446	pyridine nucleotide-disulphide oxidoreductase
LA341_18250	COG1902	pentaerythritol trinitrate reductase activity
LA341_18255	COG0778	Nitroreductase
LA341_18260	COG2264	protein methyltransferase activity
LA341_18270	COG0583	DNA-binding transcription factor activity
LA341_18275	COG1263	PTS System
LA341_18275	COG2190	(PTS) system
LA341_18275	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LA341_18280	COG4145	pantothenate transmembrane transporter activity
LA341_18290	COG0439	Biotin carboxylase
LA341_18295	COG0511	ligase activity, forming carbon-carbon bonds
LA341_18300	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
LA341_18305	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LA341_18310	COG3300	MHYT domain
LA341_18310	COG5001	Diguanylate cyclase
LA341_18325	COG3381	protein complex oligomerization
LA341_18335	COG3005	denitrification pathway
LA341_18340	COG0745	RESPONSE REGULATOR receiver
LA341_18350	COG1879	ABC-type sugar transport system periplasmic component
LA341_18355	COG0784	Response regulator, receiver
LA341_18355	COG2205	protein histidine kinase activity
LA341_18355	COG2198	Histidine kinase
LA341_18360	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LA341_18365	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LA341_18370	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LA341_18370	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LA341_18390	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LA341_18395	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
LA341_18400	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LA341_18405	COG4172	Belongs to the ABC transporter superfamily
LA341_18415	COG0601	transmembrane transport
LA341_18425	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LA341_18430	COG0142	geranyltranstransferase activity
LA341_18435	COG1722	exodeoxyribonuclease VII activity
LA341_18440	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LA341_18445	COG1360	Flagellar Motor Protein
LA341_18445	COG1360	Flagellar Motor Protein
LA341_18460	COG1534	Rna-binding protein
LA341_18465	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
LA341_18475	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LA341_18480	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LA341_18485	COG0149	triose-phosphate isomerase activity
LA341_18490	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LA341_18505	COG0779	Required for maturation of 30S ribosomal subunits
LA341_18510	COG0195	Participates in both transcription termination and antitermination
LA341_18515	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LA341_18520	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LA341_18525	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LA341_18530	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LA341_18535	COG1185	polyribonucleotide nucleotidyltransferase activity
LA341_18540	COG2201	protein-glutamate methylesterase activity
LA341_18545	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
LA341_18550	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LA341_18555	COG0840	transmembrane signaling receptor activity
LA341_18560	COG0835	chemotaxis
LA341_18565	COG0643	Histidine kinase
LA341_18565	COG2198	Histidine kinase
LA341_18585	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LA341_18595	COG1280	lysine exporter protein (LysE YggA)
LA341_18600	COG0826	peptidase U32
LA341_18650	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
LA341_18675	COG0300	oxidoreductase activity
LA341_18685	COG0840	transmembrane signaling receptor activity
LA341_18695	COG0583	DNA-binding transcription factor activity
LA341_18710	COG0549	Belongs to the carbamate kinase family
LA341_18715	COG1304	FMN binding
LA341_18720	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LA341_18725	COG1335	isochorismatase
LA341_18755	COG0077	Prephenate dehydratase
LA341_18755	COG1605	Chorismate mutase
LA341_18785	COG3272	Protein of unknown function (DUF1722)
LA341_18790	COG0789	Transcriptional regulator
LA341_18795	COG0415	Belongs to the DNA photolyase family
LA341_18805	COG0300	oxidoreductase activity
LA341_18820	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LA341_18850	COG1477	protein flavinylation
LA341_18855	COG2871	sodium ion transport
LA341_18860	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LA341_18865	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LA341_18870	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LA341_18875	COG1805	sodium ion transport
LA341_18880	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LA341_18885	COG0271	Belongs to the BolA IbaG family
LA341_18890	COG2813	Specifically methylates the guanine in position
LA341_18900	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LA341_18905	COG2211	Major facilitator Superfamily
LA341_18915	COG1666	GTP binding
LA341_18920	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LA341_18935	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LA341_18940	COG0840	transmembrane signaling receptor activity
LA341_18945	COG0583	DNA-binding transcription factor activity
LA341_18955	COG2363	Small membrane protein
LA341_18960	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
LA341_18970	COG0473	3-isopropylmalate dehydrogenase activity
LA341_18975	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LA341_18980	COG1611	Belongs to the LOG family
LA341_18995	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
LA341_18995	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
LA341_19005	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
LA341_19030	COG3098	single-species biofilm formation
LA341_19035	COG0564	pseudouridine synthase activity
LA341_19040	COG0716	FMN binding
LA341_19055	COG1263	PTS System
LA341_19055	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LA341_19065	COG2171	N-acyltransferase activity
LA341_19075	COG0024	Methionine aminopeptidase
LA341_19080	COG0052	Belongs to the universal ribosomal protein uS2 family
LA341_19085	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LA341_19090	COG0528	UMP kinase activity
LA341_19095	COG0233	cytoplasmic translational termination
LA341_19100	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LA341_19105	COG0575	Belongs to the CDS family
LA341_19110	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
LA341_19115	COG0750	zinc metalloprotease
LA341_19130	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LA341_19135	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LA341_19140	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LA341_19145	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LA341_19150	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LA341_19160	COG0825	malonyl-CoA metabolic process
LA341_19170	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LA341_19175	COG1115	amino acid carrier protein
LA341_19190	COG0714	Associated with various cellular activities
LA341_19200	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LA341_19205	COG1678	Uncharacterized ACR, COG1678
LA341_19215	COG0189	ligase activity
LA341_19220	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LA341_19230	COG3091	SprT-like family
LA341_19240	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LA341_19260	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
LA341_19265	COG0739	heme binding
LA341_19270	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LA341_19285	COG0814	amino acid
LA341_19290	COG0531	amino acid
LA341_19295	COG3710	Transcriptional regulator
LA341_19300	COG0531	amino acid
LA341_19305	COG1982	Orn Lys Arg decarboxylase major
LA341_19310	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
LA341_19320	COG3590	peptidase
LA341_19330	COG2203	Gaf domain
LA341_19330	COG2199	diguanylate cyclase activity
LA341_19365	COG0366	Alpha amylase catalytic
LA341_19380	COG0463	Glycosyl transferase, family 2
LA341_19395	COG2989	Protein conserved in bacteria
LA341_19400	COG3108	Peptidase M15
LA341_19410	COG2860	membrane
LA341_19420	COG1196	nuclear chromosome segregation
LA341_19425	COG3115	cell septum assembly
LA341_19430	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LA341_19440	COG1328	CTP reductase activity
LA341_19445	COG0602	queuosine metabolic process
LA341_19470	COG1566	PFAM secretion protein HlyD family protein
LA341_19485	COG3290	protein histidine kinase activity
LA341_19495	COG0697	spore germination
LA341_19510	COG3284	Transcriptional regulator
LA341_19515	COG3706	GGDEF domain
LA341_19520	COG0346	lactoylglutathione lyase activity
LA341_19525	COG0745	RESPONSE REGULATOR receiver
LA341_19530	COG5002	protein histidine kinase activity
LA341_19555	COG3142	Participates in the control of copper homeostasis
LA341_19560	COG0545	Peptidyl-prolyl cis-trans isomerase
LA341_19575	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
LA341_19585	COG0678	peroxiredoxin activity
LA341_19595	COG0019	diaminopimelate decarboxylase activity
LA341_19600	COG1115	amino acid carrier protein
LA341_19605	COG0095	Lipoate-protein ligase
LA341_19610	COG2233	PERMEase
LA341_19615	COG3706	GGDEF domain
LA341_19635	COG0281	malic enzyme
LA341_19665	COG0733	neurotransmitter:sodium symporter activity
LA341_19670	COG1752	Esterase of the alpha-beta hydrolase superfamily
LA341_19680	COG1566	PFAM secretion protein HlyD family protein
LA341_19685	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LA341_19690	COG1032	radical SAM domain protein
LA341_19725	COG0673	inositol 2-dehydrogenase activity
LA341_19735	COG2920	part of a sulfur-relay system
LA341_19740	COG1289	transmembrane transporter activity
LA341_19745	COG0670	Belongs to the BI1 family
LA341_19765	COG1486	melibiose metabolic process
LA341_19770	COG2169	Transcriptional regulator
LA341_19770	COG1917	Cupin 2, conserved barrel domain protein
LA341_19775	COG1447	Phosphotransferase system cellobiose-specific component IIA
LA341_19780	COG2723	6-phospho-beta-galactosidase activity
LA341_19785	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LA341_19790	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LA341_19810	COG2731	YhcH YjgK YiaL family protein
LA341_19815	COG0800	Aldolase
LA341_19820	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LA341_19825	COG1414	Transcriptional regulator
LA341_19835	COG1028	Short-chain dehydrogenase reductase Sdr
LA341_19850	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
LA341_19860	COG3156	type II secretion system protein K
LA341_19865	COG4795	General secretion pathway protein
LA341_19870	COG2165	general secretion pathway protein
LA341_19880	COG2165	general secretion pathway protein
LA341_19885	COG1459	type II secretion system
LA341_19890	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LA341_19900	COG3031	protein transport across the cell outer membrane
LA341_19910	COG3267	Type II secretory pathway component ExeA
LA341_19910	COG3409	Peptidoglycan-binding domain 1 protein
LA341_19915	COG3437	response regulator, receiver
LA341_19915	COG2770	Histidine kinase
LA341_19935	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LA341_19940	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LA341_19945	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LA341_19950	COG2190	(PTS) system
LA341_19955	COG3264	Mechanosensitive ion channel
LA341_19955	COG1196	nuclear chromosome segregation
LA341_19960	COG0469	pyruvate kinase activity
LA341_19970	COG3384	dioxygenase
LA341_19975	COG0419	ATPase involved in DNA repair
LA341_19980	COG0420	3'-5' exonuclease activity
LA341_19990	COG2974	May be involved in recombination
LA341_20005	COG1283	sodium-dependent phosphate transmembrane transporter activity
LA341_20020	COG0531	amino acid
LA341_20030	COG0531	amino acid
LA341_20040	COG1012	belongs to the aldehyde dehydrogenase family
LA341_20045	COG1917	Cupin 2, conserved barrel domain protein
LA341_20045	COG1396	sequence-specific DNA binding
LA341_20050	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LA341_20095	COG2862	Uncharacterized protein family, UPF0114
LA341_20115	COG3038	cytochrome b561
LA341_20120	COG1720	tRNA m6t6A37 methyltransferase activity
LA341_20140	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LA341_20145	COG4988	ABC transporter
LA341_20160	COG0745	RESPONSE REGULATOR receiver
LA341_20170	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LA341_20185	COG0640	Transcriptional regulator
LA341_20200	COG0798	PFAM Bile acid sodium symporter
LA341_20210	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LA341_20230	COG1988	membrane-bound metal-dependent
LA341_20250	COG0159	tryptophan synthase activity
LA341_20255	COG0133	tryptophan synthase activity
LA341_20260	COG0135	phosphoribosylanthranilate isomerase activity
LA341_20260	COG0134	indole-3-glycerol-phosphate synthase activity
LA341_20265	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LA341_20270	COG0512	Glutamine amidotransferase of anthranilate synthase
LA341_20270	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LA341_20275	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LA341_20285	COG0009	L-threonylcarbamoyladenylate synthase
LA341_20295	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LA341_20325	COG1946	Acyl-CoA thioesterase
LA341_20330	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
LA341_20335	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
LA341_20345	COG0083	homoserine kinase activity
LA341_20350	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
LA341_20360	COG1943	Transposase
LA341_20370	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LA341_20375	COG2130	NADP-dependent
LA341_20380	COG1309	transcriptional regulator
LA341_20385	COG1609	Transcriptional regulator
LA341_20390	COG1263	PTS System
LA341_20390	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LA341_20395	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
LA341_20400	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
LA341_20405	COG1960	acyl-CoA dehydrogenase activity
LA341_20415	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LA341_20425	COG1940	carbohydrate kinase activity
LA341_20430	COG0457	Tetratricopeptide repeat
LA341_20435	COG0477	Major facilitator Superfamily
LA341_20435	COG2814	Major facilitator Superfamily
LA341_20440	COG2017	converts alpha-aldose to the beta-anomer
LA341_20445	COG1349	DNA-binding transcription factor activity
LA341_20455	COG2222	sugar isomerase
LA341_20460	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
LA341_20465	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LA341_20475	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LA341_20480	COG3715	PTS system
LA341_20485	COG3716	PTS system mannose fructose sorbose family IID component
LA341_20490	COG4821	SIS domain
LA341_20495	COG4821	SIS domain
LA341_20505	COG3383	formate dehydrogenase (NAD+) activity
LA341_20510	COG1454	alcohol dehydrogenase
LA341_20520	COG0235	Class ii aldolase
LA341_20535	COG0738	Major facilitator superfamily
LA341_20540	COG1349	DNA-binding transcription factor activity
LA341_20625	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LA341_20665	COG3645	SOS response
LA341_20665	COG3646	Phage regulatory protein
LA341_20915	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
LA341_20920	COG2867	negative regulation of translational initiation
LA341_20925	COG2914	Belongs to the UPF0125 (RnfH) family
LA341_20930	COG1473	amidohydrolase
LA341_20935	COG1960	acyl-CoA dehydrogenase activity
LA341_20940	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
LA341_20945	COG0121	glutamine amidotransferase
LA341_20975	COG2197	response regulator
LA341_20980	COG3850	Histidine kinase
LA341_20985	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LA341_20990	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LA341_21000	COG0243	molybdopterin cofactor binding
LA341_21005	COG0437	4 iron, 4 sulfur cluster binding
LA341_21010	COG0348	domain, Protein
LA341_21020	COG3005	denitrification pathway
LA341_21025	COG0521	Mo-molybdopterin cofactor biosynthetic process
LA341_21030	COG0315	cyclic pyranopterin monophosphate synthase activity
LA341_21035	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
LA341_21040	COG0314	molybdopterin synthase activity
LA341_21055	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
LA341_21060	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LA341_21075	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LA341_21085	COG0302	gtp cyclohydrolase
LA341_21090	COG0840	transmembrane signaling receptor activity
LA341_21095	COG2759	Belongs to the formate--tetrahydrofolate ligase family
LA341_21105	COG0583	DNA-binding transcription factor activity
LA341_21110	COG2353	YceI-like domain
LA341_21120	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
LA341_21135	COG2195	Cleaves the N-terminal amino acid of tripeptides
LA341_21140	COG1166	arginine decarboxylase activity
LA341_21150	COG2015	COG2015, Alkyl sulfatase and related hydrolases
LA341_21155	COG0583	DNA-binding transcription factor activity
LA341_21170	COG0814	amino acid