locus-tag class description FT688_00030 PF00528 Binding-protein-dependent transport system inner membrane component FT688_00035 PF01266 FAD dependent oxidoreductase FT688_00040 PF03692 Putative zinc- or iron-chelating domain FT688_00050 PF02629 CoA binding domain FT688_00050 PF00549 CoA-ligase FT688_00055 PF00549 CoA-ligase FT688_00055 PF08442 ATP-grasp domain FT688_00060 PF02817 e3 binding domain FT688_00060 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FT688_00060 PF00364 Biotin-requiring enzyme FT688_00070 PF13085 2Fe-2S iron-sulfur cluster binding domain FT688_00075 PF02910 Fumarate reductase flavoprotein C-term FT688_00075 PF00890 FAD binding domain FT688_00080 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FT688_00085 PF00285 Citrate synthase, C-terminal domain FT688_00100 PF00109 Beta-ketoacyl synthase, N-terminal domain FT688_00100 PF02801 Beta-ketoacyl synthase, C-terminal domain FT688_00145 PF01197 Ribosomal protein L31 FT688_00150 PF00444 Ribosomal protein L36 FT688_00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_00160 PF03466 LysR substrate binding domain FT688_00180 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FT688_00200 PF08411 Exonuclease C-terminal FT688_00200 PF00929 Exonuclease FT688_00215 PF03788 LrgA family FT688_00220 PF04172 LrgB-like family FT688_00225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FT688_00225 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region FT688_00235 PF08891 YfcL protein FT688_00245 PF03741 Integral membrane protein TerC family FT688_00250 PF00691 OmpA family FT688_00260 PF13689 YfiR/HmsC-like FT688_00275 PF01329 Pterin 4 alpha carbinolamine dehydratase FT688_00280 PF00351 Biopterin-dependent aromatic amino acid hydroxylase FT688_00285 PF05128 Domain of unknown function (DUF697) FT688_00300 PF06667 Phage shock protein B FT688_00310 PF00158 Sigma-54 interaction domain FT688_00310 PF02954 Bacterial regulatory protein, Fis family FT688_00320 PF00528 Binding-protein-dependent transport system inner membrane component FT688_00335 PF00005 ABC transporter FT688_00340 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FT688_00345 PF00156 Phosphoribosyl transferase domain FT688_00350 PF02674 Colicin V production protein FT688_00355 PF02403 Seryl-tRNA synthetase N-terminal domain FT688_00355 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FT688_00365 PF03548 Outer membrane lipoprotein carrier protein LolA FT688_00375 PF01037 Lrp/AsnC ligand binding domain FT688_00380 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FT688_00380 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FT688_00385 PF07992 Pyridine nucleotide-disulphide oxidoreductase FT688_00390 PF17158 Membrane-associated sensor, integral membrane domain FT688_00390 PF00990 Diguanylate cyclase, GGDEF domain FT688_00400 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FT688_00410 PF01176 Translation initiation factor 1A / IF-1 FT688_00420 PF02617 ATP-dependent Clp protease adaptor protein ClpS FT688_00425 PF00313 'Cold-shock' DNA-binding domain FT688_00430 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FT688_00430 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FT688_00460 PF00182 Chitinase class I FT688_00535 PF05947 Type VI secretion system, TssF FT688_00545 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FT688_00580 PF05638 Type VI secretion system effector, Hcp FT688_00590 PF10722 Putative bacterial sensory transduction regulator FT688_00600 PF00265 Thymidine kinase FT688_00610 PF00816 H-NS histone family FT688_00615 PF01923 Cobalamin adenosyltransferase FT688_00620 PF12843 Putative quorum-sensing-regulated virulence factor FT688_00630 PF06508 Queuosine biosynthesis protein QueC FT688_00660 PF00216 Bacterial DNA-binding protein FT688_00665 PF00575 S1 RNA binding domain FT688_00675 PF00925 GTP cyclohydrolase II FT688_00680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_00680 PF03466 LysR substrate binding domain FT688_00685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_00685 PF03466 LysR substrate binding domain FT688_00705 PF00881 Nitroreductase family FT688_00710 PF00563 EAL domain FT688_00710 PF03707 Bacterial signalling protein N terminal repeat FT688_00710 PF13188 PAS domain FT688_00710 PF00990 Diguanylate cyclase, GGDEF domain FT688_00720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_00720 PF03466 LysR substrate binding domain FT688_00725 PF00072 Response regulator receiver domain FT688_00755 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) FT688_00765 PF03411 Penicillin-insensitive murein endopeptidase FT688_00795 PF01618 MotA/TolQ/ExbB proton channel family FT688_00800 PF13677 Membrane MotB of proton-channel complex MotA/MotB FT688_00800 PF00691 OmpA family FT688_00805 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FT688_00815 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FT688_00815 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FT688_00835 PF00146 NADH dehydrogenase FT688_00845 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FT688_00850 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FT688_00855 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FT688_00855 PF00361 Proton-conducting membrane transporter FT688_00865 PF00361 Proton-conducting membrane transporter FT688_00880 PF01966 HD domain FT688_00900 PF07191 zinc-ribbons FT688_00905 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FT688_00905 PF01926 50S ribosome-binding GTPase FT688_00910 PF13360 PQQ-like domain FT688_00915 PF09976 Tetratricopeptide repeat-like domain FT688_00920 PF13393 Histidyl-tRNA synthetase FT688_00920 PF03129 Anticodon binding domain FT688_00925 PF04551 GcpE protein FT688_00930 PF13464 Domain of unknown function (DUF4115) FT688_00940 PF04055 Radical SAM superfamily FT688_00945 PF00334 Nucleoside diphosphate kinase FT688_00960 PF00111 2Fe-2S iron-sulfur cluster binding domain FT688_00965 PF00012 Hsp70 protein FT688_00970 PF07743 HSCB C-terminal oligomerisation domain FT688_00975 PF01521 Iron-sulphur cluster biosynthesis FT688_00980 PF01592 NifU-like N terminal domain FT688_00990 PF02082 Transcriptional regulator FT688_00995 PF00588 SpoU rRNA Methylase family FT688_01010 PF01136 Peptidase family U32 FT688_01015 PF01136 Peptidase family U32 FT688_01020 PF07719 Tetratricopeptide repeat FT688_01020 PF13181 Tetratricopeptide repeat FT688_01030 PF02355 Protein export membrane protein FT688_01030 PF07549 SecD/SecF GG Motif FT688_01040 PF02699 Preprotein translocase subunit FT688_01045 PF01702 Queuine tRNA-ribosyltransferase FT688_01050 PF02547 Queuosine biosynthesis protein FT688_01060 PF00578 AhpC/TSA family FT688_01060 PF10417 C-terminal domain of 1-Cys peroxiredoxin FT688_01085 PF03960 ArsC family FT688_01095 PF01022 Bacterial regulatory protein, arsR family FT688_01105 PF01597 Glycine cleavage H-protein FT688_01110 PF01571 Aminomethyltransferase folate-binding domain FT688_01110 PF08669 Glycine cleavage T-protein C-terminal barrel domain FT688_01115 PF01494 FAD binding domain FT688_01120 PF01494 FAD binding domain FT688_01125 PF03695 Uncharacterised protein family (UPF0149) FT688_01130 PF05164 Cell division protein ZapA FT688_01145 PF00043 Glutathione S-transferase, C-terminal domain FT688_01145 PF02798 Glutathione S-transferase, N-terminal domain FT688_01175 PF00459 Inositol monophosphatase family FT688_01180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_01180 PF00672 HAMP domain FT688_01180 PF12729 Four helix bundle sensory module for signal transduction FT688_01195 PF01048 Phosphorylase superfamily FT688_01205 PF01497 Periplasmic binding protein FT688_01220 PF02561 Flagellar protein FliS FT688_01225 PF07196 Flagellin hook IN motif FT688_01225 PF02465 Flagellar hook-associated protein 2 N-terminus FT688_01225 PF07195 Flagellar hook-associated protein 2 C-terminus FT688_01235 PF00700 Bacterial flagellin C-terminal helical region FT688_01235 PF07196 Flagellin hook IN motif FT688_01235 PF00669 Bacterial flagellin N-terminal helical region FT688_01240 PF00700 Bacterial flagellin C-terminal helical region FT688_01240 PF00669 Bacterial flagellin N-terminal helical region FT688_01250 PF03458 UPF0126 domain FT688_01260 PF02568 Thiamine biosynthesis protein (ThiI) FT688_01260 PF02926 THUMP domain FT688_01280 PF07687 Peptidase dimerisation domain FT688_01280 PF01546 Peptidase family M20/M25/M40 FT688_01285 PF01594 AI-2E family transporter FT688_01290 PF02321 Outer membrane efflux protein FT688_01320 PF04055 Radical SAM superfamily FT688_01335 PF01061 ABC-2 type transporter FT688_01360 PF02350 UDP-N-acetylglucosamine 2-epimerase FT688_01365 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FT688_01365 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FT688_01365 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FT688_01385 PF00483 Nucleotidyl transferase FT688_01395 PF05159 Capsule polysaccharide biosynthesis protein FT688_01405 PF00528 Binding-protein-dependent transport system inner membrane component FT688_01410 PF00528 Binding-protein-dependent transport system inner membrane component FT688_01420 PF00005 ABC transporter FT688_01425 PF03956 Lysine exporter LysO FT688_01450 PF03960 ArsC family FT688_01455 PF00578 AhpC/TSA family FT688_01465 PF01206 Sulfurtransferase TusA FT688_01470 PF01594 AI-2E family transporter FT688_01480 PF00561 alpha/beta hydrolase fold FT688_01490 PF08402 TOBE domain FT688_01490 PF00005 ABC transporter FT688_01505 PF01547 Bacterial extracellular solute-binding protein FT688_01515 PF07208 Protein of unknown function (DUF1414) FT688_01550 PF03974 Ecotin FT688_01555 PF04219 Protein of unknown function, DUF FT688_01560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_01560 PF03466 LysR substrate binding domain FT688_01565 PF01817 Chorismate mutase type II FT688_01565 PF02153 Prephenate dehydrogenase FT688_01570 PF00793 DAHP synthetase I family FT688_01580 PF01266 FAD dependent oxidoreductase FT688_01580 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FT688_01585 PF00455 DeoR C terminal sensor domain FT688_01585 PF08220 DeoR-like helix-turn-helix domain FT688_01595 PF00230 Major intrinsic protein FT688_01600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FT688_01600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FT688_01605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_01605 PF03466 LysR substrate binding domain FT688_01625 PF00248 Aldo/keto reductase family FT688_01630 PF07690 Major Facilitator Superfamily FT688_01645 PF05114 Protein of unknown function (DUF692) FT688_01670 PF01654 Cytochrome bd terminal oxidase subunit I FT688_01700 PF10689 Protein of unknown function (DUF2496) FT688_01755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FT688_01765 PF01844 HNH endonuclease FT688_01770 PF00300 Histidine phosphatase superfamily (branch 1) FT688_01775 PF13309 HTH domain FT688_01775 PF08348 YheO-like PAS domain FT688_01780 PF03313 Serine dehydratase alpha chain FT688_01795 PF00672 HAMP domain FT688_01795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_01855 PF04264 YceI-like domain FT688_01875 PF17200 Single Cache domain 2 FT688_01875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_01875 PF00672 HAMP domain FT688_01880 PF01227 GTP cyclohydrolase I FT688_01890 PF00899 ThiF family FT688_01895 PF00561 alpha/beta hydrolase fold FT688_01900 PF00005 ABC transporter FT688_01900 PF03459 TOBE domain FT688_01905 PF00528 Binding-protein-dependent transport system inner membrane component FT688_01915 PF02391 MoaE protein FT688_01920 PF02597 ThiS family FT688_01930 PF00994 Probable molybdopterin binding domain FT688_01935 PF03264 NapC/NirT cytochrome c family, N-terminal region FT688_01940 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FT688_01945 PF13237 4Fe-4S dicluster domain FT688_01945 PF12801 4Fe-4S binding domain FT688_01950 PF12838 4Fe-4S dicluster domain FT688_01950 PF12800 4Fe-4S binding domain FT688_01955 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FT688_01955 PF10518 TAT (twin-arginine translocation) pathway signal sequence FT688_01955 PF01568 Molydopterin dinucleotide binding domain FT688_01955 PF00384 Molybdopterin oxidoreductase FT688_01970 PF04055 Radical SAM superfamily FT688_01970 PF06463 Molybdenum Cofactor Synthesis C FT688_01975 PF00672 HAMP domain FT688_01975 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FT688_01975 PF07730 Histidine kinase FT688_01975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FT688_01980 PF00072 Response regulator receiver domain FT688_01980 PF00196 Bacterial regulatory proteins, luxR family FT688_01990 PF09456 RcsC Alpha-Beta-Loop (ABL) FT688_01990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FT688_01990 PF00072 Response regulator receiver domain FT688_01990 PF00512 His Kinase A (phospho-acceptor) domain FT688_02010 PF13230 Glutamine amidotransferases class-II FT688_02015 PF13580 SIS domain FT688_02020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FT688_02020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FT688_02020 PF09317 Domain of unknown function (DUF1974) FT688_02020 PF02770 Acyl-CoA dehydrogenase, middle domain FT688_02025 PF11849 Domain of unknown function (DUF3369) FT688_02035 PF00929 Exonuclease FT688_02045 PF08241 Methyltransferase domain FT688_02060 PF03372 Endonuclease/Exonuclease/phosphatase family FT688_02095 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FT688_02145 PF02627 Carboxymuconolactone decarboxylase family FT688_02165 PF00005 ABC transporter FT688_02170 PF01066 CDP-alcohol phosphatidyltransferase FT688_02175 PF13406 Transglycosylase SLT domain FT688_02190 PF01047 MarR family FT688_02200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FT688_02200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FT688_02200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FT688_02200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FT688_02205 PF17206 SeqA protein N-terminal domain FT688_02205 PF03925 SeqA protein C-terminal domain FT688_02210 PF12697 Alpha/beta hydrolase family FT688_02220 PF01402 Ribbon-helix-helix protein, copG family FT688_02225 PF00258 Flavodoxin FT688_02235 PF01475 Ferric uptake regulator family FT688_02240 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FT688_02240 PF00749 tRNA synthetases class I (E and Q), catalytic domain FT688_02250 PF00367 phosphotransferase system, EIIB FT688_02250 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FT688_02250 PF02378 Phosphotransferase system, EIIC FT688_02255 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FT688_02265 PF01047 MarR family FT688_02265 PF00480 ROK family FT688_02270 PF00884 Sulfatase FT688_02270 PF08019 Phosphoethanolamine transferase EptA/EptB FT688_02275 PF01709 Transcriptional regulator FT688_02280 PF00152 tRNA synthetases class II (D, K and N) FT688_02280 PF02938 GAD domain FT688_02280 PF01336 OB-fold nucleic acid binding domain FT688_02290 PF01904 Protein of unknown function DUF72 FT688_02295 PF13649 Methyltransferase domain FT688_02320 PF10417 C-terminal domain of 1-Cys peroxiredoxin FT688_02320 PF00578 AhpC/TSA family FT688_02330 PF07968 Leukocidin/Hemolysin toxin family FT688_02330 PF12563 Hemolytic toxin N terminal FT688_02335 PF00877 NlpC/P60 family FT688_02350 PF00440 Bacterial regulatory proteins, tetR family FT688_02350 PF08359 YsiA-like protein, C-terminal region FT688_02370 PF00291 Pyridoxal-phosphate dependent enzyme FT688_02415 PF10371 Domain of unknown function FT688_02415 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FT688_02415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FT688_02415 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FT688_02415 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FT688_02420 PF07992 Pyridine nucleotide-disulphide oxidoreductase FT688_02420 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FT688_02445 PF08241 Methyltransferase domain FT688_02445 PF12697 Alpha/beta hydrolase family FT688_02460 PF00202 Aminotransferase class-III FT688_02475 PF01336 OB-fold nucleic acid binding domain FT688_02475 PF00152 tRNA synthetases class II (D, K and N) FT688_02495 PF03606 C4-dicarboxylate anaerobic carrier FT688_02505 PF03466 LysR substrate binding domain FT688_02505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_02510 PF03466 LysR substrate binding domain FT688_02510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_02515 PF03960 ArsC family FT688_02525 PF02557 D-alanyl-D-alanine carboxypeptidase FT688_02555 PF01810 LysE type translocator FT688_02560 PF00672 HAMP domain FT688_02560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_02565 PF07509 Protein of unknown function (DUF1523) FT688_02580 PF01156 Inosine-uridine preferring nucleoside hydrolase FT688_02585 PF00849 RNA pseudouridylate synthase FT688_02590 PF01048 Phosphorylase superfamily FT688_02600 PF04355 SmpA / OmlA family FT688_02610 PF03658 RnfH family Ubiquitin FT688_02620 PF01668 SmpB protein FT688_02810 PF00717 Peptidase S24-like FT688_02840 PF05772 NinB protein FT688_03020 PF02899 Phage integrase, N-terminal SAM-like domain FT688_03020 PF00589 Phage integrase family FT688_03075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_03075 PF03466 LysR substrate binding domain FT688_03080 PF02447 GntP family permease FT688_03085 PF00291 Pyridoxal-phosphate dependent enzyme FT688_03095 PF00180 Isocitrate/isopropylmalate dehydrogenase FT688_03140 PF02378 Phosphotransferase system, EIIC FT688_03140 PF00367 phosphotransferase system, EIIB FT688_03145 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FT688_03145 PF00356 Bacterial regulatory proteins, lacI family FT688_03155 PF13411 MerR HTH family regulatory protein FT688_03175 PF00583 Acetyltransferase (GNAT) family FT688_03185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FT688_03185 PF02378 Phosphotransferase system, EIIC FT688_03185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FT688_03190 PF07690 Major Facilitator Superfamily FT688_03195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FT688_03195 PF02378 Phosphotransferase system, EIIC FT688_03195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FT688_03210 PF00293 NUDIX domain FT688_03220 PF04356 Protein of unknown function (DUF489) FT688_03225 PF00206 Lyase FT688_03225 PF08328 Adenylosuccinate lyase C-terminal FT688_03230 PF08007 Cupin superfamily protein FT688_03235 PF13508 Acetyltransferase (GNAT) domain FT688_03245 PF02798 Glutathione S-transferase, N-terminal domain FT688_03250 PF01243 Pyridoxamine 5'-phosphate oxidase FT688_03250 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FT688_03265 PF01189 16S rRNA methyltransferase RsmB/F FT688_03265 PF01029 NusB family FT688_03270 PF00462 Glutaredoxin FT688_03275 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FT688_03275 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FT688_03280 PF04333 MlaA lipoprotein FT688_03285 PF03918 Cytochrome C biogenesis protein FT688_03290 PF03918 Cytochrome C biogenesis protein FT688_03295 PF08534 Redoxin FT688_03300 PF01578 Cytochrome C assembly protein FT688_03300 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FT688_03305 PF03100 CcmE FT688_03310 PF04995 Heme exporter protein D (CcmD) FT688_03315 PF01578 Cytochrome C assembly protein FT688_03325 PF00005 ABC transporter FT688_03335 PF01584 CheW-like domain FT688_03345 PF13614 AAA domain FT688_03350 PF00691 OmpA family FT688_03350 PF13677 Membrane MotB of proton-channel complex MotA/MotB FT688_03355 PF01618 MotA/TolQ/ExbB proton channel family FT688_03360 PF01339 CheB methylesterase FT688_03360 PF00072 Response regulator receiver domain FT688_03370 PF04344 Chemotaxis phosphatase, CheZ FT688_03375 PF00072 Response regulator receiver domain FT688_03380 PF04539 Sigma-70 region 3 FT688_03380 PF04545 Sigma-70, region 4 FT688_03380 PF04542 Sigma-70 region 2 FT688_03385 PF10609 NUBPL iron-transfer P-loop NTPase FT688_03390 PF00448 SRP54-type protein, GTPase domain FT688_03410 PF01313 Bacterial export proteins, family 3 FT688_03415 PF00813 FliP family FT688_03420 PF04347 Flagellar biosynthesis protein, FliO FT688_03425 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FT688_03460 PF14841 FliG middle domain FT688_03460 PF01706 FliG C-terminal domain FT688_03460 PF14842 FliG N-terminal domain FT688_03465 PF08345 Flagellar M-ring protein C-terminal FT688_03465 PF01514 Secretory protein of YscJ/FliF family FT688_03470 PF02049 Flagellar hook-basal body complex protein FliE FT688_03495 PF02794 RTX toxin acyltransferase family FT688_03520 PF00072 Response regulator receiver domain FT688_03520 PF00486 Transcriptional regulatory protein, C terminal FT688_03525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FT688_03530 PF02685 Glucokinase FT688_03535 PF01380 SIS domain FT688_03535 PF01418 Helix-turn-helix domain, rpiR family FT688_03540 PF00224 Pyruvate kinase, barrel domain FT688_03540 PF02887 Pyruvate kinase, alpha/beta domain FT688_03580 PF02634 FdhD/NarQ family FT688_03585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_03585 PF03466 LysR substrate binding domain FT688_03610 PF00936 BMC domain FT688_03615 PF00936 BMC domain FT688_03630 PF00171 Aldehyde dehydrogenase family FT688_03630 PF00465 Iron-containing alcohol dehydrogenase FT688_03635 PF01228 Glycine radical FT688_03635 PF02901 Pyruvate formate lyase-like FT688_03640 PF04055 Radical SAM superfamily FT688_03640 PF13187 4Fe-4S dicluster domain FT688_03645 PF00936 BMC domain FT688_03650 PF06130 Phosphate propanoyltransferase FT688_03660 PF00893 Small Multidrug Resistance protein FT688_03665 PF00893 Small Multidrug Resistance protein FT688_03690 PF01575 MaoC like domain FT688_03695 PF05971 RNA methyltransferase FT688_03700 PF00877 NlpC/P60 family FT688_03710 PF00085 Thioredoxin FT688_03720 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FT688_03735 PF13396 Phospholipase_D-nuclease N-terminal FT688_03735 PF13091 PLD-like domain FT688_03755 PF00128 Alpha amylase, catalytic domain FT688_03760 PF10145 Phage-related minor tail protein FT688_03760 PF01464 Transglycosylase SLT domain FT688_03760 PF01551 Peptidase family M23 FT688_03770 PF02075 Crossover junction endodeoxyribonuclease RuvC FT688_03780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FT688_03805 PF05656 Protein of unknown function (DUF805) FT688_03825 PF11842 Domain of unknown function (DUF3362) FT688_03825 PF08497 Radical SAM N-terminal FT688_03825 PF04055 Radical SAM superfamily FT688_03850 PF01734 Patatin-like phospholipase FT688_03870 PF01389 OmpA-like transmembrane domain FT688_03870 PF00691 OmpA family FT688_03875 PF00691 OmpA family FT688_03875 PF01389 OmpA-like transmembrane domain FT688_03885 PF03949 Malic enzyme, NAD binding domain FT688_03885 PF00390 Malic enzyme, N-terminal domain FT688_03895 PF01554 MatE FT688_03900 PF10692 Protein of unknown function (DUF2498) FT688_03905 PF00072 Response regulator receiver domain FT688_03905 PF00990 Diguanylate cyclase, GGDEF domain FT688_03920 PF01235 Sodium:alanine symporter family FT688_03925 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FT688_03925 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FT688_03945 PF00293 NUDIX domain FT688_03965 PF00005 ABC transporter FT688_03970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FT688_03970 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FT688_03975 PF03932 CutC family FT688_03980 PF00480 ROK family FT688_03990 PF01435 Peptidase family M48 FT688_03995 PF12849 PBP superfamily domain FT688_04000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FT688_04000 PF00512 His Kinase A (phospho-acceptor) domain FT688_04000 PF00989 PAS fold FT688_04000 PF11808 Phosphate regulon sensor protein PhoR FT688_04005 PF00072 Response regulator receiver domain FT688_04005 PF00486 Transcriptional regulatory protein, C terminal FT688_04010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FT688_04050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FT688_04050 PF00989 PAS fold FT688_04050 PF17203 Single cache domain 3 FT688_04050 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FT688_04075 PF00529 HlyD membrane-fusion protein of T1SS FT688_04075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FT688_04100 PF01679 Proteolipid membrane potential modulator FT688_04150 PF05951 Bacterial protein of unknown function (DUF882) FT688_04155 PF01471 Putative peptidoglycan binding domain FT688_04155 PF03734 L,D-transpeptidase catalytic domain FT688_04170 PF00535 Glycosyl transferase family 2 FT688_04185 PF00128 Alpha amylase, catalytic domain FT688_04220 PF00990 Diguanylate cyclase, GGDEF domain FT688_04245 PF13302 Acetyltransferase (GNAT) domain FT688_04250 PF13520 Amino acid permease FT688_04260 PF12706 Beta-lactamase superfamily domain FT688_04280 PF08543 Phosphomethylpyrimidine kinase FT688_04285 PF01276 Orn/Lys/Arg decarboxylase, major domain FT688_04285 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FT688_04285 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FT688_04290 PF13520 Amino acid permease FT688_04295 PF00486 Transcriptional regulatory protein, C terminal FT688_04295 PF18500 CadC C-terminal domain 1 FT688_04300 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FT688_04305 PF07733 Bacterial DNA polymerase III alpha NTPase domain FT688_04305 PF14579 Helix-hairpin-helix motif FT688_04305 PF02811 PHP domain FT688_04305 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FT688_04305 PF01336 OB-fold nucleic acid binding domain FT688_04310 PF01351 Ribonuclease HII FT688_04315 PF02684 Lipid-A-disaccharide synthetase FT688_04325 PF07977 FabA-like domain FT688_04330 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FT688_04330 PF00132 Bacterial transferase hexapeptide (six repeats) FT688_04345 PF02163 Peptidase family M50 FT688_04345 PF17820 PDZ domain FT688_04350 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FT688_04350 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FT688_04350 PF13288 DXP reductoisomerase C-terminal domain FT688_04360 PF01255 Putative undecaprenyl diphosphate synthase FT688_04365 PF01765 Ribosome recycling factor FT688_04370 PF00696 Amino acid kinase family FT688_04375 PF00889 Elongation factor TS FT688_04380 PF00318 Ribosomal protein S2 FT688_04385 PF00557 Metallopeptidase family M24 FT688_04390 PF01966 HD domain FT688_04390 PF01842 ACT domain FT688_04390 PF08335 GlnD PII-uridylyltransferase FT688_04390 PF01909 Nucleotidyltransferase domain FT688_04395 PF14602 Hexapeptide repeat of succinyl-transferase FT688_04395 PF00132 Bacterial transferase hexapeptide (six repeats) FT688_04395 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FT688_04400 PF11944 Protein of unknown function (DUF3461) FT688_04415 PF02264 LamB porin FT688_04430 PF04287 tRNA pseudouridine synthase C FT688_04455 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) FT688_04460 PF07348 Syd protein (SUKH-2) FT688_04465 PF14489 QueF-like protein FT688_04465 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FT688_04480 PF11892 Domain of unknown function (DUF3412) FT688_04480 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FT688_04480 PF03641 Possible lysine decarboxylase FT688_04485 PF01367 5'-3' exonuclease, C-terminal SAM fold FT688_04485 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FT688_04500 PF01728 FtsJ-like methyltransferase FT688_04500 PF18125 RlmM ferredoxin-like domain FT688_04505 PF04241 Protein of unknown function (DUF423) FT688_04515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_04515 PF03466 LysR substrate binding domain FT688_04520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_04520 PF00672 HAMP domain FT688_04525 PF00817 impB/mucB/samB family FT688_04525 PF11799 impB/mucB/samB family C-terminal domain FT688_04525 PF11798 IMS family HHH motif FT688_04540 PF02424 ApbE family FT688_04545 PF00970 Oxidoreductase FAD-binding domain FT688_04545 PF00175 Oxidoreductase NAD-binding domain FT688_04545 PF00111 2Fe-2S iron-sulfur cluster binding domain FT688_04550 PF02508 Rnf-Nqr subunit, membrane protein FT688_04555 PF02508 Rnf-Nqr subunit, membrane protein FT688_04560 PF04205 FMN-binding domain FT688_04565 PF03116 NQR2, RnfD, RnfE family FT688_04580 PF05175 Methyltransferase small domain FT688_04605 PF03502 Nucleoside-specific channel-forming protein, Tsx FT688_04610 PF04461 Protein of unknown function (DUF520) FT688_04615 PF02558 Ketopantoate reductase PanE/ApbA FT688_04615 PF08546 Ketopantoate reductase PanE/ApbA C terminal FT688_04625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FT688_04625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FT688_04625 PF00205 Thiamine pyrophosphate enzyme, central domain FT688_04635 PF03466 LysR substrate binding domain FT688_04635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_04670 PF05638 Type VI secretion system effector, Hcp FT688_04675 PF00196 Bacterial regulatory proteins, luxR family FT688_04675 PF03472 Autoinducer binding domain FT688_04695 PF13462 Thioredoxin FT688_04695 PF06965 Na+/H+ antiporter 1 FT688_04715 PF00210 Ferritin-like domain FT688_04755 PF00106 short chain dehydrogenase FT688_04765 PF03441 FAD binding domain of DNA photolyase FT688_04765 PF00875 DNA photolyase FT688_04770 PF13411 MerR HTH family regulatory protein FT688_04775 PF08349 Protein of unknown function (DUF1722) FT688_04805 PF00800 Prephenate dehydratase FT688_04805 PF01817 Chorismate mutase type II FT688_04835 PF00916 Sulfate permease family FT688_04835 PF01740 STAS domain FT688_04855 PF03573 outer membrane porin, OprD family FT688_04915 PF01136 Peptidase family U32 FT688_04915 PF12392 Collagenase FT688_04930 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FT688_04930 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FT688_04935 PF00672 HAMP domain FT688_04935 PF02743 Cache domain FT688_04935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_04940 PF00072 Response regulator receiver domain FT688_04960 PF01584 CheW-like domain FT688_04975 PF03975 CheD chemotactic sensory transduction FT688_04985 PF00266 Aminotransferase class-V FT688_05015 PF00196 Bacterial regulatory proteins, luxR family FT688_05015 PF00072 Response regulator receiver domain FT688_05040 PF00990 Diguanylate cyclase, GGDEF domain FT688_05040 PF00989 PAS fold FT688_05040 PF00563 EAL domain FT688_05040 PF01590 GAF domain FT688_05060 PF00842 Alanine racemase, C-terminal domain FT688_05060 PF01168 Alanine racemase, N-terminal domain FT688_05065 PF00772 DnaB-like helicase N terminal domain FT688_05065 PF03796 DnaB-like helicase C terminal domain FT688_05070 PF03796 DnaB-like helicase C terminal domain FT688_05070 PF00772 DnaB-like helicase N terminal domain FT688_05110 PF00072 Response regulator receiver domain FT688_05110 PF02954 Bacterial regulatory protein, Fis family FT688_05110 PF00158 Sigma-54 interaction domain FT688_05115 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FT688_05115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FT688_05125 PF04102 SlyX FT688_05130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FT688_05135 PF09526 Probable metal-binding protein (DUF2387) FT688_05145 PF00072 Response regulator receiver domain FT688_05145 PF01584 CheW-like domain FT688_05160 PF06794 Uncharacterised protein family (UPF0270) FT688_05165 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FT688_05165 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FT688_05165 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FT688_05170 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FT688_05195 PF00892 EamA-like transporter family FT688_05200 PF00893 Small Multidrug Resistance protein FT688_05225 PF13545 Crp-like helix-turn-helix domain FT688_05225 PF00027 Cyclic nucleotide-binding domain FT688_05260 PF13443 Cro/C1-type HTH DNA-binding domain FT688_05275 PF07715 TonB-dependent Receptor Plug Domain FT688_05275 PF00593 TonB dependent receptor FT688_05295 PF01243 Pyridoxamine 5'-phosphate oxidase FT688_05315 PF00005 ABC transporter FT688_05325 PF01370 NAD dependent epimerase/dehydratase family FT688_05400 PF05099 Tellurite resistance protein TerB FT688_05400 PF00226 DnaJ domain FT688_05410 PF01636 Phosphotransferase enzyme family FT688_05415 PF03968 OstA-like protein FT688_05415 PF04453 LPS transport system D FT688_05425 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FT688_05430 PF00398 Ribosomal RNA adenine dimethylase FT688_05435 PF04379 ApaG domain FT688_05440 PF00149 Calcineurin-like phosphoesterase FT688_05450 PF00296 Luciferase-like monooxygenase FT688_05480 PF01018 GTP1/OBG FT688_05480 PF01926 50S ribosome-binding GTPase FT688_05485 PF01016 Ribosomal L27 protein FT688_05490 PF00829 Ribosomal prokaryotic L21 protein FT688_05495 PF00348 Polyprenyl synthetase FT688_05505 PF01145 SPFH domain / Band 7 family FT688_05510 PF12221 Bacterial membrane protein N terminal FT688_05510 PF01145 SPFH domain / Band 7 family FT688_05520 PF17209 Hfq protein FT688_05535 PF01520 N-acetylmuramoyl-L-alanine amidase FT688_05555 PF00480 ROK family FT688_05565 PF00005 ABC transporter FT688_05565 PF09383 NIL domain FT688_05570 PF00528 Binding-protein-dependent transport system inner membrane component FT688_05575 PF03180 NLPA lipoprotein FT688_05580 PF02357 Transcription termination factor nusG FT688_05585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_05585 PF00672 HAMP domain FT688_05590 PF00563 EAL domain FT688_05590 PF00990 Diguanylate cyclase, GGDEF domain FT688_05590 PF03707 Bacterial signalling protein N terminal repeat FT688_05630 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FT688_05655 PF00701 Dihydrodipicolinate synthetase family FT688_05660 PF01842 ACT domain FT688_05665 PF00578 AhpC/TSA family FT688_05670 PF03887 YfbU domain FT688_05675 PF04217 Protein of unknown function, DUF412 FT688_05680 PF00871 Acetokinase family FT688_05685 PF01515 Phosphate acetyl/butaryl transferase FT688_05685 PF07085 DRTGG domain FT688_05690 PF10369 Small subunit of acetolactate synthase FT688_05695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FT688_05695 PF00205 Thiamine pyrophosphate enzyme, central domain FT688_05695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FT688_05710 PF01569 PAP2 superfamily FT688_05725 PF00180 Isocitrate/isopropylmalate dehydrogenase FT688_05760 PF00005 ABC transporter FT688_05810 PF00849 RNA pseudouridylate synthase FT688_05820 PF03707 Bacterial signalling protein N terminal repeat FT688_05820 PF13188 PAS domain FT688_05820 PF00990 Diguanylate cyclase, GGDEF domain FT688_05820 PF00563 EAL domain FT688_05830 PF00118 TCP-1/cpn60 chaperonin family FT688_05835 PF00166 Chaperonin 10 Kd subunit FT688_05840 PF01554 MatE FT688_05845 PF04186 FxsA cytoplasmic membrane protein FT688_05850 PF10415 Fumarase C C-terminus FT688_05850 PF00206 Lyase FT688_05855 PF03605 Anaerobic c4-dicarboxylate membrane transporter FT688_05860 PF00267 Gram-negative porin FT688_05875 PF04151 Bacterial pre-peptidase C-terminal domain FT688_05875 PF01447 Thermolysin metallopeptidase, catalytic domain FT688_05875 PF02868 Thermolysin metallopeptidase, alpha-helical domain FT688_05875 PF07504 Fungalysin/Thermolysin Propeptide Motif FT688_05875 PF03413 Peptidase propeptide and YPEB domain FT688_05880 PF13302 Acetyltransferase (GNAT) domain FT688_05885 PF13302 Acetyltransferase (GNAT) domain FT688_05900 PF07690 Major Facilitator Superfamily FT688_05905 PF01725 Ham1 family FT688_05915 PF03889 Alternative ribosome-rescue factor A FT688_05925 PF13411 MerR HTH family regulatory protein FT688_05930 PF02142 MGS-like domain FT688_05930 PF01808 AICARFT/IMPCHase bienzyme FT688_05960 PF04539 Sigma-70 region 3 FT688_05960 PF04546 Sigma-70, non-essential region FT688_05960 PF03979 Sigma-70 factor, region 1.1 FT688_05960 PF00140 Sigma-70 factor, region 1.2 FT688_05960 PF04545 Sigma-70, region 4 FT688_05960 PF04542 Sigma-70 region 2 FT688_05970 PF09424 Yqey-like protein FT688_05975 PF01165 Ribosomal protein S21 FT688_05980 PF00814 Glycoprotease family FT688_06005 PF01975 Survival protein SurE FT688_06010 PF01142 tRNA pseudouridine synthase D (TruD) FT688_06015 PF02542 YgbB family FT688_06030 PF00113 Enolase, C-terminal TIM barrel domain FT688_06030 PF03952 Enolase, N-terminal domain FT688_06085 PF03830 PTS system sorbose subfamily IIB component FT688_06090 PF03609 PTS system sorbose-specific iic component FT688_06095 PF03613 PTS system mannose/fructose/sorbose family IID component FT688_06110 PF01116 Fructose-bisphosphate aldolase class-II FT688_06120 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FT688_06125 PF02565 Recombination protein O C terminal FT688_06125 PF11967 Recombination protein O N terminal FT688_06130 PF07650 KH domain FT688_06130 PF01926 50S ribosome-binding GTPase FT688_06135 PF00035 Double-stranded RNA binding motif FT688_06135 PF14622 Ribonuclease-III-like FT688_06140 PF10502 Signal peptidase, peptidase S26 FT688_06160 PF03872 Anti sigma-E protein RseA, N-terminal domain FT688_06160 PF03873 Anti sigma-E protein RseA, C-terminal domain FT688_06165 PF08281 Sigma-70, region 4 FT688_06165 PF04542 Sigma-70 region 2 FT688_06170 PF02910 Fumarate reductase flavoprotein C-term FT688_06170 PF00890 FAD binding domain FT688_06180 PF03937 Flavinator of succinate dehydrogenase FT688_06185 PF01571 Aminomethyltransferase folate-binding domain FT688_06190 PF03466 LysR substrate binding domain FT688_06190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_06205 PF03091 CutA1 divalent ion tolerance protein FT688_06210 PF02683 Cytochrome C biogenesis protein transmembrane region FT688_06210 PF11412 Disulphide bond corrector protein DsbC FT688_06220 PF01266 FAD dependent oxidoreductase FT688_06225 PF01116 Fructose-bisphosphate aldolase class-II FT688_06230 PF00162 Phosphoglycerate kinase FT688_06255 PF01619 Proline dehydrogenase FT688_06255 PF00171 Aldehyde dehydrogenase family FT688_06255 PF14850 DNA-binding domain of Proline dehydrogenase FT688_06255 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FT688_06260 PF08239 Bacterial SH3 domain FT688_06270 PF00672 HAMP domain FT688_06270 PF02743 Cache domain FT688_06270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_06300 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FT688_06300 PF00326 Prolyl oligopeptidase family FT688_06320 PF00005 ABC transporter FT688_06325 PF00497 Bacterial extracellular solute-binding proteins, family 3 FT688_06335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FT688_06340 PF00486 Transcriptional regulatory protein, C terminal FT688_06340 PF00072 Response regulator receiver domain FT688_06390 PF03060 Nitronate monooxygenase FT688_06400 PF00445 Ribonuclease T2 family FT688_06420 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase FT688_06435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_06435 PF03466 LysR substrate binding domain FT688_06440 PF00990 Diguanylate cyclase, GGDEF domain FT688_06455 PF00753 Metallo-beta-lactamase superfamily FT688_06465 PF01425 Amidase FT688_06470 PF04371 Porphyromonas-type peptidyl-arginine deiminase FT688_06475 PF03466 LysR substrate binding domain FT688_06475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_06485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FT688_06510 PF16658 Class II release factor RF3, C-terminal domain FT688_06510 PF00009 Elongation factor Tu GTP binding domain FT688_06510 PF03144 Elongation factor Tu domain 2 FT688_06515 PF00990 Diguanylate cyclase, GGDEF domain FT688_06515 PF00072 Response regulator receiver domain FT688_06525 PF13188 PAS domain FT688_06525 PF03707 Bacterial signalling protein N terminal repeat FT688_06525 PF00990 Diguanylate cyclase, GGDEF domain FT688_06525 PF00563 EAL domain FT688_06535 PF12592 Protein of unknown function (DUF3763) FT688_06535 PF17868 AAA lid domain FT688_06535 PF07728 AAA domain (dynein-related subfamily) FT688_06545 PF00583 Acetyltransferase (GNAT) family FT688_06555 PF00501 AMP-binding enzyme FT688_06580 PF08240 Alcohol dehydrogenase GroES-like domain FT688_06580 PF00698 Acyl transferase domain FT688_06580 PF00109 Beta-ketoacyl synthase, N-terminal domain FT688_06580 PF16197 Ketoacyl-synthetase C-terminal extension FT688_06580 PF08990 Erythronolide synthase docking FT688_06580 PF14765 Polyketide synthase dehydratase FT688_06580 PF00550 Phosphopantetheine attachment site FT688_06580 PF02801 Beta-ketoacyl synthase, C-terminal domain FT688_06580 PF08659 KR domain FT688_06605 PF01281 Ribosomal protein L9, N-terminal domain FT688_06605 PF03948 Ribosomal protein L9, C-terminal domain FT688_06610 PF01084 Ribosomal protein S18 FT688_06615 PF01250 Ribosomal protein S6 FT688_06655 PF00588 SpoU rRNA Methylase family FT688_06655 PF08032 RNA 2'-O ribose methyltransferase substrate binding FT688_06670 PF02664 S-Ribosylhomocysteinase (LuxS) FT688_06680 PF00543 Nitrogen regulatory protein P-II FT688_06740 PF12019 Type II transport protein GspH FT688_06740 PF07963 Prokaryotic N-terminal methylation motif FT688_06750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FT688_06765 PF01687 Riboflavin kinase FT688_06765 PF06574 FAD synthetase FT688_06775 PF01649 Ribosomal protein S20 FT688_06780 PF01022 Bacterial regulatory protein, arsR family FT688_06785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_06785 PF03466 LysR substrate binding domain FT688_06800 PF00303 Thymidylate synthase FT688_06815 PF00293 NUDIX domain FT688_06830 PF01245 Ribosomal protein L19 FT688_06835 PF01746 tRNA (Guanine-1)-methyltransferase FT688_06840 PF01782 RimM N-terminal domain FT688_06840 PF05239 PRC-barrel domain FT688_06845 PF00886 Ribosomal protein S16 FT688_06850 PF00448 SRP54-type protein, GTPase domain FT688_06850 PF02978 Signal peptide binding domain FT688_06850 PF02881 SRP54-type protein, helical bundle domain FT688_06855 PF01578 Cytochrome C assembly protein FT688_06865 PF02082 Transcriptional regulator FT688_06870 PF00175 Oxidoreductase NAD-binding domain FT688_06870 PF00042 Globin FT688_06870 PF00970 Oxidoreductase FAD-binding domain FT688_06880 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FT688_06880 PF00056 lactate/malate dehydrogenase, NAD binding domain FT688_06885 PF00528 Binding-protein-dependent transport system inner membrane component FT688_06890 PF00528 Binding-protein-dependent transport system inner membrane component FT688_06895 PF00497 Bacterial extracellular solute-binding proteins, family 3 FT688_06900 PF00005 ABC transporter FT688_06905 PF01316 Arginine repressor, DNA binding domain FT688_06905 PF02863 Arginine repressor, C-terminal domain FT688_06910 PF04261 Dyp-type peroxidase family FT688_06915 PF00005 ABC transporter FT688_06915 PF08402 TOBE domain FT688_06935 PF00472 RF-1 domain FT688_06940 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FT688_06940 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FT688_06945 PF07662 Na+ dependent nucleoside transporter C-terminus FT688_06945 PF07670 Nucleoside recognition FT688_06945 PF01773 Na+ dependent nucleoside transporter N-terminus FT688_06950 PF03466 LysR substrate binding domain FT688_06950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_06965 PF02595 Glycerate kinase family FT688_06970 PF02447 GntP family permease FT688_06975 PF05651 Putative sugar diacid recognition FT688_06975 PF17853 GGDEF-like domain FT688_06975 PF13556 PucR C-terminal helix-turn-helix domain FT688_06980 PF06062 Uncharacterised protein family (UPF0231) FT688_06995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_06995 PF08447 PAS fold FT688_07000 PF03372 Endonuclease/Exonuclease/phosphatase family FT688_07025 PF08534 Redoxin FT688_07050 PF02583 Metal-sensitive transcriptional repressor FT688_07145 PF00005 ABC transporter FT688_07145 PF12857 TOBE-like domain FT688_07175 PF14602 Hexapeptide repeat of succinyl-transferase FT688_07175 PF12464 Maltose acetyltransferase FT688_07200 PF00206 Lyase FT688_07200 PF14698 Argininosuccinate lyase C-terminal FT688_07205 PF00764 Arginosuccinate synthase FT688_07210 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FT688_07210 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FT688_07215 PF00696 Amino acid kinase family FT688_07220 PF01118 Semialdehyde dehydrogenase, NAD binding domain FT688_07220 PF02774 Semialdehyde dehydrogenase, dimerisation domain FT688_07230 PF00311 Phosphoenolpyruvate carboxylase FT688_07250 PF01340 Met Apo-repressor, MetJ FT688_07265 PF03222 Tryptophan/tyrosine permease family FT688_07275 PF00293 NUDIX domain FT688_07280 PF13419 Haloacid dehalogenase-like hydrolase FT688_07285 PF00579 tRNA synthetases class I (W and Y) FT688_07285 PF01479 S4 domain FT688_07295 PF01203 Type II secretion system (T2SS), protein N FT688_07300 PF04612 Type II secretion system (T2SS), protein M FT688_07305 PF12693 GspL periplasmic domain FT688_07305 PF05134 Type II secretion system (T2SS), protein L FT688_07320 PF07963 Prokaryotic N-terminal methylation motif FT688_07320 PF02501 Type II secretion system (T2SS), protein I FT688_07325 PF07963 Prokaryotic N-terminal methylation motif FT688_07325 PF12019 Type II transport protein GspH FT688_07335 PF07963 Prokaryotic N-terminal methylation motif FT688_07335 PF08334 Type II secretion system (T2SS), protein G FT688_07355 PF11356 Type II secretion system protein C FT688_07360 PF01479 S4 domain FT688_07365 PF01430 Hsp33 protein FT688_07370 PF01293 Phosphoenolpyruvate carboxykinase FT688_07385 PF11756 Nitrous oxide-stimulated promoter FT688_07395 PF05433 Glycine zipper 2TM domain FT688_07400 PF02872 5'-nucleotidase, C-terminal domain FT688_07400 PF00149 Calcineurin-like phosphoesterase FT688_07405 PF01810 LysE type translocator FT688_07410 PF03472 Autoinducer binding domain FT688_07410 PF00196 Bacterial regulatory proteins, luxR family FT688_07415 PF00765 Autoinducer synthase FT688_07430 PF00440 Bacterial regulatory proteins, tetR family FT688_07440 PF02378 Phosphotransferase system, EIIC FT688_07440 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FT688_07440 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FT688_07445 PF08125 Mannitol dehydrogenase C-terminal domain FT688_07445 PF01232 Mannitol dehydrogenase Rossmann domain FT688_07450 PF05068 Mannitol repressor FT688_07495 PF04307 LexA-binding, inner membrane-associated putative hydrolase FT688_07500 PF07670 Nucleoside recognition FT688_07500 PF01773 Na+ dependent nucleoside transporter N-terminus FT688_07500 PF07662 Na+ dependent nucleoside transporter C-terminus FT688_07505 PF00271 Helicase conserved C-terminal domain FT688_07505 PF03880 DbpA RNA binding domain FT688_07505 PF00270 DEAD/DEAH box helicase FT688_07540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FT688_07540 PF16582 Middle domain of thiamine pyrophosphate FT688_07540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FT688_07550 PF00378 Enoyl-CoA hydratase/isomerase FT688_07560 PF13193 AMP-binding enzyme C-terminal domain FT688_07560 PF00501 AMP-binding enzyme FT688_07570 PF00419 Fimbrial protein FT688_07580 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FT688_07580 PF02753 Pili assembly chaperone PapD, C-terminal domain FT688_07595 PF00419 Fimbrial protein FT688_07610 PF02698 DUF218 domain FT688_07660 PF01053 Cys/Met metabolism PLP-dependent enzyme FT688_07685 PF03577 Peptidase family C69 FT688_07690 PF00106 short chain dehydrogenase FT688_07715 PF16657 Maltogenic Amylase, C-terminal domain FT688_07715 PF02903 Alpha amylase, N-terminal ig-like domain FT688_07715 PF00128 Alpha amylase, catalytic domain FT688_07730 PF00884 Sulfatase FT688_07735 PF01037 Lrp/AsnC ligand binding domain FT688_07745 PF04204 Homoserine O-succinyltransferase FT688_07750 PF00013 KH domain FT688_07750 PF01966 HD domain FT688_07750 PF12072 Domain of unknown function (DUF3552) FT688_07755 PF02464 Competence-damaged protein FT688_07755 PF00994 Probable molybdopterin binding domain FT688_07785 PF07722 Peptidase C26 FT688_07805 PF13419 Haloacid dehalogenase-like hydrolase FT688_07810 PF00589 Phage integrase family FT688_07810 PF02899 Phage integrase, N-terminal SAM-like domain FT688_07820 PF01678 Diaminopimelate epimerase FT688_07825 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FT688_07825 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FT688_07835 PF01491 Frataxin-like domain FT688_07850 PF03900 Porphobilinogen deaminase, C-terminal domain FT688_07850 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FT688_07855 PF02602 Uroporphyrinogen-III synthase HemD FT688_07870 PF03692 Putative zinc- or iron-chelating domain FT688_07920 PF08803 Putative mono-oxygenase ydhR FT688_07935 PF06055 Exopolysaccharide synthesis, ExoD FT688_07945 PF00990 Diguanylate cyclase, GGDEF domain FT688_07945 PF17151 Periplasmic sensor domain FT688_07960 PF13036 Peptidoglycan-synthase activator LpoB FT688_07980 PF05690 Thiazole biosynthesis protein ThiG FT688_07990 PF00899 ThiF family FT688_08000 PF13667 ThiC-associated domain FT688_08000 PF01964 Radical SAM ThiC family FT688_08010 PF05935 Arylsulfotransferase (ASST) FT688_08010 PF17425 Arylsulfotransferase Ig-like domain FT688_08035 PF18030 RimK PreATP-grasp domain FT688_08035 PF08443 RimK-like ATP-grasp domain FT688_08045 PF00999 Sodium/hydrogen exchanger family FT688_08075 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) FT688_08095 PF01740 STAS domain FT688_08095 PF08678 Rsbr N terminal FT688_08140 PF13580 SIS domain FT688_08170 PF00795 Carbon-nitrogen hydrolase FT688_08180 PF13116 Protein of unknown function FT688_08180 PF13502 AsmA-like C-terminal region FT688_08195 PF04093 rod shape-determining protein MreD FT688_08235 PF08334 Type II secretion system (T2SS), protein G FT688_08235 PF07963 Prokaryotic N-terminal methylation motif FT688_08240 PF07963 Prokaryotic N-terminal methylation motif FT688_08270 PF00263 Bacterial type II and III secretion system protein FT688_08270 PF03958 Bacterial type II/III secretion system short domain FT688_08305 PF00563 EAL domain FT688_08305 PF12792 CSS motif domain associated with EAL FT688_08310 PF01699 Sodium/calcium exchanger protein FT688_08315 PF00221 Aromatic amino acid lyase FT688_08320 PF17392 Urocanase C-terminal domain FT688_08320 PF17391 Urocanase N-terminal domain FT688_08320 PF01175 Urocanase Rossmann-like domain FT688_08330 PF01979 Amidohydrolase family FT688_08335 PF07702 UTRA domain FT688_08335 PF00392 Bacterial regulatory proteins, gntR family FT688_08340 PF00484 Carbonic anhydrase FT688_08345 PF00140 Sigma-70 factor, region 1.2 FT688_08345 PF04542 Sigma-70 region 2 FT688_08345 PF04545 Sigma-70, region 4 FT688_08350 PF18075 FtsX extracellular domain FT688_08355 PF00005 ABC transporter FT688_08360 PF02881 SRP54-type protein, helical bundle domain FT688_08360 PF00448 SRP54-type protein, GTPase domain FT688_08375 PF07226 Protein of unknown function (DUF1422) FT688_08380 PF00440 Bacterial regulatory proteins, tetR family FT688_08405 PF02416 mttA/Hcf106 family FT688_08415 PF01914 MarC family integral membrane protein FT688_08420 PF10678 Protein of unknown function (DUF2492) FT688_08425 PF00375 Sodium:dicarboxylate symporter family FT688_08435 PF03466 LysR substrate binding domain FT688_08435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_08440 PF13533 Biotin-lipoyl like FT688_08445 PF07690 Major Facilitator Superfamily FT688_08450 PF07947 YhhN family FT688_08490 PF00106 short chain dehydrogenase FT688_08495 PF03466 LysR substrate binding domain FT688_08495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_08500 PF02525 Flavodoxin-like fold FT688_08505 PF00999 Sodium/hydrogen exchanger family FT688_08505 PF02254 TrkA-N domain FT688_08555 PF01196 Ribosomal protein L17 FT688_08560 PF01000 RNA polymerase Rpb3/RpoA insert domain FT688_08560 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FT688_08560 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FT688_08565 PF00163 Ribosomal protein S4/S9 N-terminal domain FT688_08565 PF01479 S4 domain FT688_08570 PF00411 Ribosomal protein S11 FT688_08575 PF00416 Ribosomal protein S13/S18 FT688_08580 PF00444 Ribosomal protein L36 FT688_08585 PF00344 SecY translocase FT688_08590 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FT688_08595 PF00327 Ribosomal protein L30p/L7e FT688_08600 PF03719 Ribosomal protein S5, C-terminal domain FT688_08600 PF00333 Ribosomal protein S5, N-terminal domain FT688_08610 PF00347 Ribosomal protein L6 FT688_08615 PF00410 Ribosomal protein S8 FT688_08620 PF00253 Ribosomal protein S14p/S29e FT688_08625 PF00281 Ribosomal protein L5 FT688_08625 PF00673 ribosomal L5P family C-terminus FT688_08630 PF00467 KOW motif FT688_08630 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FT688_08635 PF00238 Ribosomal protein L14p/L23e FT688_08640 PF00366 Ribosomal protein S17 FT688_08645 PF00831 Ribosomal L29 protein FT688_08655 PF07650 KH domain FT688_08655 PF00189 Ribosomal protein S3, C-terminal domain FT688_08675 PF00276 Ribosomal protein L23 FT688_08680 PF00573 Ribosomal protein L4/L1 family FT688_08685 PF00297 Ribosomal protein L3 FT688_08690 PF00338 Ribosomal protein S10p/S20e FT688_08705 PF00072 Response regulator receiver domain FT688_08705 PF00486 Transcriptional regulatory protein, C terminal FT688_08710 PF00072 Response regulator receiver domain FT688_08710 PF00486 Transcriptional regulatory protein, C terminal FT688_08745 PF00156 Phosphoribosyl transferase domain FT688_08750 PF01521 Iron-sulphur cluster biosynthesis FT688_08750 PF01106 NifU-like domain FT688_08760 PF02556 Preprotein translocase subunit SecB FT688_08765 PF00581 Rhodanese-like domain FT688_08770 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FT688_08770 PF01676 Metalloenzyme superfamily FT688_08775 PF01551 Peptidase family M23 FT688_08790 PF01081 KDPG and KHG aldolase FT688_08795 PF00920 Dehydratase family FT688_08800 PF01202 Shikimate kinase FT688_08805 PF02447 GntP family permease FT688_08825 PF09500 Putative thioesterase (yiiD_Cterm) FT688_08825 PF00583 Acetyltransferase (GNAT) family FT688_08835 PF02580 D-Tyr-tRNA(Tyr) deacylase FT688_08845 PF00009 Elongation factor Tu GTP binding domain FT688_08845 PF00679 Elongation factor G C-terminus FT688_08845 PF03144 Elongation factor Tu domain 2 FT688_08850 PF00120 Glutamine synthetase, catalytic domain FT688_08850 PF03951 Glutamine synthetase, beta-Grasp domain FT688_08870 PF00962 Adenosine/AMP deaminase FT688_08880 PF10675 Protein of unknown function (DUF2489) FT688_08885 PF04220 Der GTPase activator (YihI) FT688_08900 PF01926 50S ribosome-binding GTPase FT688_08905 PF07369 Protein of unknown function (DUF1488) FT688_08915 PF01218 Coproporphyrinogen III oxidase FT688_08925 PF00731 AIR carboxylase FT688_08930 PF01396 Topoisomerase DNA binding C4 zinc finger FT688_08935 PF04361 Protein of unknown function (DUF494) FT688_08940 PF17782 DprA winged helix domain FT688_08940 PF02481 DNA recombination-mediator protein A FT688_08950 PF01327 Polypeptide deformylase FT688_08955 PF00551 Formyl transferase FT688_08955 PF02911 Formyl transferase, C-terminal domain FT688_08960 PF01029 NusB family FT688_08960 PF01189 16S rRNA methyltransferase RsmB/F FT688_08970 PF02386 Cation transport protein FT688_08990 PF02082 Transcriptional regulator FT688_08995 PF00294 pfkB family carbohydrate kinase FT688_09000 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FT688_09000 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FT688_09005 PF00958 GMP synthase C terminal domain FT688_09005 PF02540 NAD synthase FT688_09005 PF00117 Glutamine amidotransferase class-I FT688_09020 PF07883 Cupin domain FT688_09020 PF01381 Helix-turn-helix FT688_09030 PF00892 EamA-like transporter family FT688_09055 PF01810 LysE type translocator FT688_09130 PF00580 UvrD/REP helicase N-terminal domain FT688_09130 PF13361 UvrD-like helicase C-terminal domain FT688_09135 PF02608 ABC transporter substrate-binding protein PnrA-like FT688_09140 PF00005 ABC transporter FT688_09150 PF02653 Branched-chain amino acid transport system / permease component FT688_09160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_09160 PF03466 LysR substrate binding domain FT688_09170 PF00756 Putative esterase FT688_09190 PF13520 Amino acid permease FT688_09195 PF01588 Putative tRNA binding domain FT688_09200 PF13520 Amino acid permease FT688_09210 PF02929 Beta galactosidase small chain FT688_09210 PF16353 Domain of unknown function(DUF4981) FT688_09210 PF00703 Glycosyl hydrolases family 2 FT688_09210 PF02837 Glycosyl hydrolases family 2, sugar binding domain FT688_09210 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FT688_09215 PF00356 Bacterial regulatory proteins, lacI family FT688_09250 PF00132 Bacterial transferase hexapeptide (six repeats) FT688_09265 PF06005 Cell division protein ZapB FT688_09275 PF06426 Serine acetyltransferase, N-terminal FT688_09275 PF00132 Bacterial transferase hexapeptide (six repeats) FT688_09280 PF16916 Dimerisation domain of Zinc Transporter FT688_09280 PF01545 Cation efflux family FT688_09285 PF00486 Transcriptional regulatory protein, C terminal FT688_09285 PF00072 Response regulator receiver domain FT688_09295 PF00588 SpoU rRNA Methylase family FT688_09305 PF02630 SCO1/SenC FT688_09325 PF00717 Peptidase S24-like FT688_09325 PF01726 LexA DNA binding domain FT688_09330 PF01553 Acyltransferase FT688_09335 PF01040 UbiA prenyltransferase family FT688_09340 PF04345 Chorismate lyase FT688_09375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FT688_09400 PF00535 Glycosyl transferase family 2 FT688_09405 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FT688_09410 PF01467 Cytidylyltransferase-like FT688_09415 PF04393 Protein of unknown function (DUF535) FT688_09420 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FT688_09420 PF06827 Zinc finger found in FPG and IleRS FT688_09420 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FT688_09430 PF00471 Ribosomal protein L33 FT688_09435 PF00830 Ribosomal L28 family FT688_09440 PF04002 RadC-like JAB domain FT688_09450 PF00692 dUTPase FT688_09455 PF00440 Bacterial regulatory proteins, tetR family FT688_09460 PF05552 Conserved TM helix FT688_09460 PF00924 Mechanosensitive ion channel FT688_09475 PF00342 Phosphoglucose isomerase FT688_09480 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FT688_09480 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FT688_09485 PF03466 LysR substrate binding domain FT688_09485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_09500 PF13607 Succinyl-CoA ligase like flavodoxin domain FT688_09500 PF00583 Acetyltransferase (GNAT) family FT688_09500 PF13380 CoA binding domain FT688_09535 PF09186 Domain of unknown function (DUF1949) FT688_09535 PF01205 Uncharacterized protein family UPF0029 FT688_09550 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FT688_09550 PF00378 Enoyl-CoA hydratase/isomerase FT688_09550 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FT688_09560 PF00072 Response regulator receiver domain FT688_09560 PF00486 Transcriptional regulatory protein, C terminal FT688_09580 PF01206 Sulfurtransferase TusA FT688_09585 PF01042 Endoribonuclease L-PSP FT688_09595 PF13488 Glycine zipper FT688_09595 PF00691 OmpA family FT688_09605 PF03352 Methyladenine glycosylase FT688_09610 PF02091 Glycyl-tRNA synthetase alpha subunit FT688_09615 PF02092 Glycyl-tRNA synthetase beta subunit FT688_09615 PF05746 DALR anticodon binding domain FT688_09630 PF01202 Shikimate kinase FT688_09680 PF07702 UTRA domain FT688_09680 PF00392 Bacterial regulatory proteins, gntR family FT688_09700 PF13458 Periplasmic binding protein FT688_09705 PF02653 Branched-chain amino acid transport system / permease component FT688_09710 PF11862 Domain of unknown function (DUF3382) FT688_09710 PF02653 Branched-chain amino acid transport system / permease component FT688_09735 PF00581 Rhodanese-like domain FT688_09740 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FT688_09740 PF01694 Rhomboid family FT688_09750 PF04380 Membrane fusogenic activity FT688_09755 PF00175 Oxidoreductase NAD-binding domain FT688_09770 PF07497 Rho termination factor, RNA-binding domain FT688_09770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FT688_09770 PF07498 Rho termination factor, N-terminal domain FT688_09775 PF00085 Thioredoxin FT688_09780 PF00270 DEAD/DEAH box helicase FT688_09780 PF00271 Helicase conserved C-terminal domain FT688_09785 PF02541 Ppx/GppA phosphatase family FT688_09800 PF04445 Putative SAM-dependent methyltransferase FT688_09805 PF03707 Bacterial signalling protein N terminal repeat FT688_09805 PF00990 Diguanylate cyclase, GGDEF domain FT688_09805 PF00563 EAL domain FT688_09810 PF01432 Peptidase family M3 FT688_09815 PF00490 Delta-aminolevulinic acid dehydratase FT688_09820 PF01026 TatD related DNase FT688_09825 PF00902 Sec-independent protein translocase protein (TatC) FT688_09830 PF02416 mttA/Hcf106 family FT688_09835 PF02416 mttA/Hcf106 family FT688_09845 PF02036 SCP-2 sterol transfer family FT688_09850 PF01209 ubiE/COQ5 methyltransferase family FT688_09860 PF07969 Amidohydrolase family FT688_09910 PF02472 Biopolymer transport protein ExbD/TolR FT688_09915 PF01618 MotA/TolQ/ExbB proton channel family FT688_09930 PF00196 Bacterial regulatory proteins, luxR family FT688_09930 PF03472 Autoinducer binding domain FT688_09935 PF01380 SIS domain FT688_09940 PF08220 DeoR-like helix-turn-helix domain FT688_09940 PF00455 DeoR C terminal sensor domain FT688_09945 PF00486 Transcriptional regulatory protein, C terminal FT688_09945 PF00072 Response regulator receiver domain FT688_09955 PF00905 Penicillin binding protein transpeptidase domain FT688_09965 PF12804 MobA-like NTP transferase domain FT688_09965 PF14602 Hexapeptide repeat of succinyl-transferase FT688_09965 PF00132 Bacterial transferase hexapeptide (six repeats) FT688_09970 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FT688_09970 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FT688_09975 PF02874 ATP synthase alpha/beta family, beta-barrel domain FT688_09975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FT688_09985 PF02874 ATP synthase alpha/beta family, beta-barrel domain FT688_09985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FT688_09985 PF00306 ATP synthase alpha/beta chain, C terminal domain FT688_09990 PF00213 ATP synthase delta (OSCP) subunit FT688_09995 PF00430 ATP synthase B/B' CF(0) FT688_10000 PF00137 ATP synthase subunit C FT688_10005 PF00119 ATP synthase A chain FT688_10025 PF02527 rRNA small subunit methyltransferase G FT688_10035 PF00258 Flavodoxin FT688_10045 PF00005 ABC transporter FT688_10050 PF00005 ABC transporter FT688_10070 PF14849 YidC periplasmic domain FT688_10070 PF02096 60Kd inner membrane protein FT688_10075 PF01809 Putative membrane protein insertion efficiency factor FT688_10080 PF00825 Ribonuclease P FT688_10085 PF00468 Ribosomal protein L34 FT688_10090 PF00005 ABC transporter FT688_10095 PF00528 Binding-protein-dependent transport system inner membrane component FT688_10100 PF00497 Bacterial extracellular solute-binding proteins, family 3 FT688_10105 PF08299 Bacterial dnaA protein helix-turn-helix FT688_10105 PF11638 DnaA N-terminal domain FT688_10105 PF00308 Bacterial dnaA protein FT688_10110 PF02768 DNA polymerase III beta subunit, C-terminal domain FT688_10110 PF02767 DNA polymerase III beta subunit, central domain FT688_10110 PF00712 DNA polymerase III beta subunit, N-terminal domain FT688_10115 PF02463 RecF/RecN/SMC N terminal domain FT688_10120 PF00204 DNA gyrase B FT688_10120 PF00986 DNA gyrase B subunit, carboxyl terminus FT688_10120 PF18053 DNA gyrase B subunit insert domain FT688_10120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FT688_10120 PF01751 Toprim domain FT688_10130 PF13280 WYL domain FT688_10130 PF08279 HTH domain FT688_10135 PF00011 Hsp20/alpha crystallin family FT688_10140 PF00011 Hsp20/alpha crystallin family FT688_10145 PF00155 Aminotransferase class I and II FT688_10165 PF00072 Response regulator receiver domain FT688_10165 PF00486 Transcriptional regulatory protein, C terminal FT688_10175 PF02669 K+-transporting ATPase, c chain FT688_10185 PF03814 Potassium-transporting ATPase A subunit FT688_10195 PF07992 Pyridine nucleotide-disulphide oxidoreductase FT688_10195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FT688_10210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FT688_10215 PF00440 Bacterial regulatory proteins, tetR family FT688_10250 PF07690 Major Facilitator Superfamily FT688_10265 PF14532 Sigma-54 interaction domain FT688_10265 PF00072 Response regulator receiver domain FT688_10265 PF02954 Bacterial regulatory protein, Fis family FT688_10295 PF01192 RNA polymerase Rpb6 FT688_10300 PF00625 Guanylate kinase FT688_10305 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FT688_10345 PF00579 tRNA synthetases class I (W and Y) FT688_10350 PF00582 Universal stress protein family FT688_10360 PF00990 Diguanylate cyclase, GGDEF domain FT688_10365 PF00210 Ferritin-like domain FT688_10375 PF07690 Major Facilitator Superfamily FT688_10380 PF01810 LysE type translocator FT688_10400 PF18649 EcpB C-terminal domain FT688_10405 PF16449 Fimbrillin MatB FT688_10410 PF00072 Response regulator receiver domain FT688_10410 PF00196 Bacterial regulatory proteins, luxR family FT688_10415 PF00497 Bacterial extracellular solute-binding proteins, family 3 FT688_10415 PF00989 PAS fold FT688_10415 PF01627 Hpt domain FT688_10415 PF00512 His Kinase A (phospho-acceptor) domain FT688_10415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FT688_10415 PF00072 Response regulator receiver domain FT688_10425 PF06580 Histidine kinase FT688_10425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FT688_10425 PF07694 5TMR of 5TMR-LYT FT688_10430 PF04397 LytTr DNA-binding domain FT688_10430 PF00072 Response regulator receiver domain FT688_10435 PF07690 Major Facilitator Superfamily FT688_10440 PF02222 ATP-grasp domain FT688_10440 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FT688_10445 PF00731 AIR carboxylase FT688_10465 PF07715 TonB-dependent Receptor Plug Domain FT688_10465 PF00593 TonB dependent receptor FT688_10470 PF01177 Asp/Glu/Hydantoin racemase FT688_10505 PF00899 ThiF family FT688_10510 PF02657 Fe-S metabolism associated domain FT688_10515 PF00266 Aminotransferase class-V FT688_10520 PF00580 UvrD/REP helicase N-terminal domain FT688_10520 PF13361 UvrD-like helicase C-terminal domain FT688_10525 PF03707 Bacterial signalling protein N terminal repeat FT688_10525 PF00563 EAL domain FT688_10525 PF00990 Diguanylate cyclase, GGDEF domain FT688_10530 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FT688_10540 PF00155 Aminotransferase class I and II FT688_10545 PF08360 QacR-like protein, C-terminal region FT688_10545 PF00440 Bacterial regulatory proteins, tetR family FT688_10550 PF01370 NAD dependent epimerase/dehydratase family FT688_10565 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) FT688_10590 PF01138 3' exoribonuclease family, domain 1 FT688_10590 PF03725 3' exoribonuclease family, domain 2 FT688_10595 PF00156 Phosphoribosyl transferase domain FT688_10600 PF00403 Heavy-metal-associated domain FT688_10605 PF09278 MerR, DNA binding FT688_10605 PF00376 MerR family regulatory protein FT688_10615 PF06288 Protein of unknown function (DUF1040) FT688_10625 PF01636 Phosphotransferase enzyme family FT688_10630 PF01323 DSBA-like thioredoxin domain FT688_10640 PF00005 ABC transporter FT688_10650 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FT688_10650 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FT688_10655 PF00857 Isochorismatase family FT688_10670 PF04463 Protein of unknown function (DUF523) FT688_10675 PF01553 Acyltransferase FT688_10680 PF01553 Acyltransferase FT688_10705 PF01063 Amino-transferase class IV FT688_10730 PF00440 Bacterial regulatory proteins, tetR family FT688_10745 PF01197 Ribosomal protein L31 FT688_10765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FT688_10765 PF00512 His Kinase A (phospho-acceptor) domain FT688_10765 PF00672 HAMP domain FT688_10830 PF08666 SAF domain FT688_10830 PF03102 NeuB family FT688_10860 PF00501 AMP-binding enzyme FT688_10860 PF13193 AMP-binding enzyme C-terminal domain FT688_10875 PF00535 Glycosyl transferase family 2 FT688_10880 PF03275 UDP-galactopyranose mutase FT688_10915 PF01209 ubiE/COQ5 methyltransferase family FT688_10930 PF02543 Carbamoyltransferase N-terminus FT688_10930 PF16861 Carbamoyltransferase C-terminus FT688_10940 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FT688_10945 PF02719 Polysaccharide biosynthesis protein FT688_10950 PF02903 Alpha amylase, N-terminal ig-like domain FT688_10950 PF00128 Alpha amylase, catalytic domain FT688_10965 PF00012 Hsp70 protein FT688_10970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FT688_10970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FT688_10975 PF05981 CreA protein FT688_10990 PF01258 Prokaryotic dksA/traR C4-type zinc finger FT688_11015 PF00005 ABC transporter FT688_11015 PF08402 TOBE domain FT688_11020 PF00528 Binding-protein-dependent transport system inner membrane component FT688_11025 PF00528 Binding-protein-dependent transport system inner membrane component FT688_11030 PF03473 MOSC domain FT688_11030 PF03475 3-alpha domain FT688_11045 PF03061 Thioesterase superfamily FT688_11055 PF00034 Cytochrome c FT688_11060 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FT688_11070 PF02592 Putative vitamin uptake transporter FT688_11075 PF03737 Aldolase/RraA FT688_11080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_11080 PF00672 HAMP domain FT688_11085 PF01769 Divalent cation transporter FT688_11085 PF03448 MgtE intracellular N domain FT688_11085 PF00571 CBS domain FT688_11090 PF10414 Sirohaem synthase dimerisation region FT688_11090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FT688_11090 PF14824 Sirohaem biosynthesis protein central FT688_11095 PF01226 Formate/nitrite transporter FT688_11100 PF13806 Rieske-like [2Fe-2S] domain FT688_11105 PF07992 Pyridine nucleotide-disulphide oxidoreductase FT688_11105 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FT688_11105 PF04324 BFD-like [2Fe-2S] binding domain FT688_11105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FT688_11105 PF18267 Rubredoxin NAD+ reductase C-terminal domain FT688_11110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_11110 PF03466 LysR substrate binding domain FT688_11120 PF10431 C-terminal, D2-small domain, of ClpB protein FT688_11120 PF07724 AAA domain (Cdc48 subfamily) FT688_11120 PF00004 ATPase family associated with various cellular activities (AAA) FT688_11125 PF00227 Proteasome subunit FT688_11150 PF04542 Sigma-70 region 2 FT688_11150 PF04545 Sigma-70, region 4 FT688_11170 PF01263 Aldose 1-epimerase FT688_11190 PF00356 Bacterial regulatory proteins, lacI family FT688_11205 PF00005 ABC transporter FT688_11210 PF02653 Branched-chain amino acid transport system / permease component FT688_11215 PF02743 Cache domain FT688_11215 PF00672 HAMP domain FT688_11215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_11240 PF00696 Amino acid kinase family FT688_11245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FT688_11245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FT688_11250 PF03606 C4-dicarboxylate anaerobic carrier FT688_11260 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain FT688_11260 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain FT688_11265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FT688_11265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FT688_11285 PF00561 alpha/beta hydrolase fold FT688_11300 PF03466 LysR substrate binding domain FT688_11300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_11305 PF02743 Cache domain FT688_11305 PF00672 HAMP domain FT688_11305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_11315 PF12833 Helix-turn-helix domain FT688_11315 PF06719 AraC-type transcriptional regulator N-terminus FT688_11320 PF00465 Iron-containing alcohol dehydrogenase FT688_11325 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FT688_11325 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FT688_11325 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FT688_11330 PF02233 NAD(P) transhydrogenase beta subunit FT688_11350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FT688_11350 PF07992 Pyridine nucleotide-disulphide oxidoreductase FT688_11355 PF13525 Outer membrane lipoprotein FT688_11360 PF00849 RNA pseudouridylate synthase FT688_11360 PF01479 S4 domain FT688_11365 PF02578 Multi-copper polyphenol oxidoreductase laccase FT688_11370 PF10431 C-terminal, D2-small domain, of ClpB protein FT688_11370 PF17871 AAA lid domain FT688_11370 PF07724 AAA domain (Cdc48 subfamily) FT688_11370 PF00004 ATPase family associated with various cellular activities (AAA) FT688_11370 PF02861 Clp amino terminal domain, pathogenicity island component FT688_11385 PF03590 Aspartate-ammonia ligase FT688_11400 PF10063 Uncharacterized integral membrane protein (DUF2301) FT688_11405 PF00478 IMP dehydrogenase / GMP reductase domain FT688_11405 PF00571 CBS domain FT688_11425 PF00512 His Kinase A (phospho-acceptor) domain FT688_11425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FT688_11440 PF06496 Protein of unknown function (DUF1097) FT688_11455 PF01794 Ferric reductase like transmembrane component FT688_11490 PF03264 NapC/NirT cytochrome c family, N-terminal region FT688_11520 PF02254 TrkA-N domain FT688_11520 PF02080 TrkA-C domain FT688_11525 PF01565 FAD binding domain FT688_11525 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FT688_11530 PF02237 Biotin protein ligase C terminal domain FT688_11530 PF08279 HTH domain FT688_11530 PF03099 Biotin/lipoate A/B protein ligase family FT688_11535 PF00485 Phosphoribulokinase / Uridine kinase family FT688_11550 PF03143 Elongation factor Tu C-terminal domain FT688_11550 PF03144 Elongation factor Tu domain 2 FT688_11550 PF00009 Elongation factor Tu GTP binding domain FT688_11560 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FT688_11565 PF00467 KOW motif FT688_11565 PF02357 Transcription termination factor nusG FT688_11570 PF00298 Ribosomal protein L11, RNA binding domain FT688_11570 PF03946 Ribosomal protein L11, N-terminal domain FT688_11575 PF00687 Ribosomal protein L1p/L10e family FT688_11580 PF00466 Ribosomal protein L10 FT688_11585 PF00542 Ribosomal protein L7/L12 C-terminal domain FT688_11585 PF16320 Ribosomal protein L7/L12 dimerisation domain FT688_11590 PF00562 RNA polymerase Rpb2, domain 6 FT688_11590 PF04561 RNA polymerase Rpb2, domain 2 FT688_11590 PF04560 RNA polymerase Rpb2, domain 7 FT688_11590 PF04565 RNA polymerase Rpb2, domain 3 FT688_11590 PF04563 RNA polymerase beta subunit FT688_11590 PF10385 RNA polymerase beta subunit external 1 domain FT688_11595 PF00623 RNA polymerase Rpb1, domain 2 FT688_11595 PF04983 RNA polymerase Rpb1, domain 3 FT688_11595 PF05000 RNA polymerase Rpb1, domain 4 FT688_11595 PF04998 RNA polymerase Rpb1, domain 5 FT688_11595 PF04997 RNA polymerase Rpb1, domain 1 FT688_11600 PF13309 HTH domain FT688_11600 PF08348 YheO-like PAS domain FT688_11605 PF01042 Endoribonuclease L-PSP FT688_11610 PF02635 DsrE/DsrF-like family FT688_11615 PF02635 DsrE/DsrF-like family FT688_11620 PF04077 DsrH like protein FT688_11625 PF00164 Ribosomal protein S12/S23 FT688_11630 PF00177 Ribosomal protein S7p/S5e FT688_11635 PF03144 Elongation factor Tu domain 2 FT688_11635 PF00679 Elongation factor G C-terminus FT688_11635 PF00009 Elongation factor Tu GTP binding domain FT688_11635 PF14492 Elongation Factor G, domain II FT688_11635 PF03764 Elongation factor G, domain IV FT688_11640 PF03144 Elongation factor Tu domain 2 FT688_11640 PF00009 Elongation factor Tu GTP binding domain FT688_11640 PF03143 Elongation factor Tu C-terminal domain FT688_11685 PF00860 Permease family FT688_11690 PF02733 Dak1 domain FT688_11695 PF02734 DAK2 domain FT688_11705 PF00465 Iron-containing alcohol dehydrogenase FT688_11715 PF03466 LysR substrate binding domain FT688_11715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_11730 PF05014 Nucleoside 2-deoxyribosyltransferase FT688_11770 PF00583 Acetyltransferase (GNAT) family FT688_11810 PF00528 Binding-protein-dependent transport system inner membrane component FT688_11825 PF07702 UTRA domain FT688_11825 PF00392 Bacterial regulatory proteins, gntR family FT688_11835 PF03466 LysR substrate binding domain FT688_11835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_11845 PF02678 Pirin FT688_11845 PF17954 Quercetinase C-terminal cupin domain FT688_11850 PF07681 DoxX FT688_11855 PF17946 RecC C-terminal domain FT688_11865 PF13538 UvrD-like helicase C-terminal domain FT688_11885 PF00990 Diguanylate cyclase, GGDEF domain FT688_11910 PF00486 Transcriptional regulatory protein, C terminal FT688_11910 PF00072 Response regulator receiver domain FT688_11930 PF00313 'Cold-shock' DNA-binding domain FT688_11955 PF00436 Single-strand binding protein family FT688_11965 PF17760 UvrA interaction domain FT688_11965 PF00005 ABC transporter FT688_11965 PF17755 UvrA DNA-binding domain FT688_11975 PF03922 OmpW family FT688_11980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_11980 PF00672 HAMP domain FT688_12005 PF03594 Benzoate membrane transport protein FT688_12040 PF04363 Protein of unknown function (DUF496) FT688_12050 PF04751 Protein of unknown function (DUF615) FT688_12060 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FT688_12065 PF01722 BolA-like protein FT688_12075 PF05494 MlaC protein FT688_12080 PF02470 MlaD protein FT688_12085 PF02405 Permease MlaE FT688_12090 PF00005 ABC transporter FT688_12095 PF00571 CBS domain FT688_12095 PF01380 SIS domain FT688_12105 PF06835 Lipopolysaccharide-assembly, LptC-related FT688_12110 PF03968 OstA-like protein FT688_12115 PF12399 Branched-chain amino acid ATP-binding cassette transporter FT688_12115 PF00005 ABC transporter FT688_12125 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FT688_12130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FT688_12140 PF00381 PTS HPr component phosphorylation site FT688_12150 PF07071 KDGP aldolase FT688_12190 PF13180 PDZ domain FT688_12195 PF00595 PDZ domain FT688_12195 PF13180 PDZ domain FT688_12210 PF00572 Ribosomal protein L13 FT688_12215 PF00380 Ribosomal protein S9/S16 FT688_12220 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FT688_12220 PF00355 Rieske [2Fe-2S] domain FT688_12225 PF00033 Cytochrome b/b6/petB FT688_12225 PF00032 Cytochrome b(C-terminal)/b6/petD FT688_12235 PF02798 Glutathione S-transferase, N-terminal domain FT688_12235 PF00043 Glutathione S-transferase, C-terminal domain FT688_12240 PF04386 Stringent starvation protein B FT688_12245 PF04972 BON domain FT688_12250 PF13580 SIS domain FT688_12255 PF02021 Uncharacterised protein family UPF0102 FT688_12260 PF04348 LppC putative lipoprotein FT688_12265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FT688_12275 PF02381 MraZ protein, putative antitoxin-like FT688_12285 PF04999 Cell division protein FtsL FT688_12290 PF03717 Penicillin-binding Protein dimerisation domain FT688_12290 PF00905 Penicillin binding protein transpeptidase domain FT688_12300 PF02875 Mur ligase family, glutamate ligase domain FT688_12300 PF01225 Mur ligase family, catalytic domain FT688_12300 PF08245 Mur ligase middle domain FT688_12315 PF01098 Cell cycle protein FT688_12320 PF04101 Glycosyltransferase family 28 C-terminal domain FT688_12320 PF03033 Glycosyltransferase family 28 N-terminal domain FT688_12325 PF08245 Mur ligase middle domain FT688_12325 PF02875 Mur ligase family, glutamate ligase domain FT688_12325 PF01225 Mur ligase family, catalytic domain FT688_12345 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FT688_12355 PF07516 SecA Wing and Scaffold domain FT688_12355 PF01043 SecA preprotein cross-linking domain FT688_12355 PF02810 SEC-C motif FT688_12355 PF07517 SecA DEAD-like domain FT688_12365 PF00293 NUDIX domain FT688_12370 PF03884 DNA gyrase inhibitor YacG FT688_12375 PF07072 Cell division protein FT688_12380 PF01121 Dephospho-CoA kinase FT688_12390 PF00482 Type II secretion system (T2SS), protein F FT688_12395 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FT688_12395 PF00437 Type II/IV secretion system protein FT688_12400 PF07963 Prokaryotic N-terminal methylation motif FT688_12410 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FT688_12410 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FT688_12420 PF01510 N-acetylmuramoyl-L-alanine amidase FT688_12425 PF00392 Bacterial regulatory proteins, gntR family FT688_12425 PF07729 FCD domain FT688_12430 PF17831 Pyruvate dehydrogenase E1 component middle domain FT688_12430 PF00456 Transketolase, thiamine diphosphate binding domain FT688_12435 PF02817 e3 binding domain FT688_12435 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FT688_12435 PF00364 Biotin-requiring enzyme FT688_12440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FT688_12440 PF07992 Pyridine nucleotide-disulphide oxidoreductase FT688_12465 PF11791 Aconitate B N-terminal domain FT688_12465 PF00330 Aconitase family (aconitate hydratase) FT688_12465 PF06434 Aconitate hydratase 2 N-terminus FT688_12475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_12475 PF03466 LysR substrate binding domain FT688_12480 PF01810 LysE type translocator FT688_12505 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FT688_12510 PF02152 Dihydroneopterin aldolase FT688_12560 PF00072 Response regulator receiver domain FT688_12560 PF01584 CheW-like domain FT688_12570 PF05127 Helicase FT688_12570 PF08351 Domain of unknown function (DUF1726) FT688_12570 PF17176 tRNA-binding domain FT688_12570 PF13718 GNAT acetyltransferase 2 FT688_12585 PF00210 Ferritin-like domain FT688_12625 PF00356 Bacterial regulatory proteins, lacI family FT688_12630 PF00367 phosphotransferase system, EIIB FT688_12630 PF02378 Phosphotransferase system, EIIC FT688_12680 PF03553 Na+/H+ antiporter family FT688_12725 PF00483 Nucleotidyl transferase FT688_12730 PF05175 Methyltransferase small domain FT688_12730 PF08468 Methyltransferase small domain N-terminal FT688_12735 PF00701 Dihydrodipicolinate synthetase family FT688_12740 PF00360 Phytochrome region FT688_12740 PF01590 GAF domain FT688_12740 PF00563 EAL domain FT688_12740 PF00990 Diguanylate cyclase, GGDEF domain FT688_12750 PF13419 Haloacid dehalogenase-like hydrolase FT688_12755 PF17209 Hfq protein FT688_12760 PF04403 Paraquat-inducible protein A FT688_12765 PF02470 MlaD protein FT688_12770 PF03886 ABC-type transport auxiliary lipoprotein component FT688_12790 PF04076 Bacterial OB fold (BOF) protein FT688_12800 PF04362 Bacterial Fe(2+) trafficking FT688_12810 PF16537 Type II secretion system protein B FT688_12815 PF13401 AAA domain FT688_12815 PF01471 Putative peptidoglycan binding domain FT688_12840 PF03788 LrgA family FT688_12870 PF07350 Protein of unknown function (DUF1479) FT688_12880 PF04073 Aminoacyl-tRNA editing domain FT688_12885 PF01384 Phosphate transporter family FT688_12890 PF01865 Protein of unknown function DUF47 FT688_12905 PF03279 Bacterial lipid A biosynthesis acyltransferase FT688_12910 PF01467 Cytidylyltransferase-like FT688_12910 PF00294 pfkB family carbohydrate kinase FT688_12935 PF05728 Uncharacterised protein family (UPF0227) FT688_12950 PF07869 Protein of unknown function (DUF1656) FT688_12965 PF00986 DNA gyrase B subunit, carboxyl terminus FT688_12965 PF00204 DNA gyrase B FT688_12965 PF01751 Toprim domain FT688_12965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FT688_12980 PF03466 LysR substrate binding domain FT688_12980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_13045 PF01553 Acyltransferase FT688_13050 PF04012 PspA/IM30 family FT688_13065 PF01541 GIY-YIG catalytic domain FT688_13075 PF00892 EamA-like transporter family FT688_13080 PF03167 Uracil DNA glycosylase superfamily FT688_13085 PF00892 EamA-like transporter family FT688_13095 PF00950 ABC 3 transport family FT688_13100 PF00005 ABC transporter FT688_13105 PF01297 Zinc-uptake complex component A periplasmic FT688_13130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FT688_13135 PF04222 Protein of unknown function (DUF416) FT688_13160 PF02464 Competence-damaged protein FT688_13165 PF00154 recA bacterial DNA recombination protein FT688_13170 PF02631 RecX family FT688_13175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FT688_13175 PF02272 DHHA1 domain FT688_13175 PF01411 tRNA synthetases class II (A) FT688_13180 PF00696 Amino acid kinase family FT688_13180 PF01842 ACT domain FT688_13180 PF13840 ACT domain FT688_13185 PF02599 Global regulator protein family FT688_13220 PF00768 D-alanyl-D-alanine carboxypeptidase FT688_13225 PF09335 SNARE associated Golgi protein FT688_13230 PF01595 Cyclin M transmembrane N-terminal domain FT688_13230 PF03471 Transporter associated domain FT688_13230 PF00571 CBS domain FT688_13235 PF00133 tRNA synthetases class I (I, L, M and V) FT688_13235 PF08264 Anticodon-binding domain of tRNA FT688_13235 PF10458 Valyl tRNA synthetase tRNA binding arm FT688_13240 PF04364 DNA polymerase III chi subunit, HolC FT688_13245 PF00883 Cytosol aminopeptidase family, catalytic domain FT688_13245 PF02789 Cytosol aminopeptidase family, N-terminal domain FT688_13250 PF03739 Lipopolysaccharide export system permease LptF/LptG FT688_13255 PF03739 Lipopolysaccharide export system permease LptF/LptG FT688_13275 PF01938 TRAM domain FT688_13275 PF05958 tRNA (Uracil-5-)-methyltransferase FT688_13310 PF02885 Glycosyl transferase family, helical bundle domain FT688_13310 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FT688_13310 PF00591 Glycosyl transferase family, a/b domain FT688_13315 PF01676 Metalloenzyme superfamily FT688_13320 PF01048 Phosphorylase superfamily FT688_13325 PF00563 EAL domain FT688_13325 PF00990 Diguanylate cyclase, GGDEF domain FT688_13325 PF08448 PAS fold FT688_13325 PF08447 PAS fold FT688_13325 PF05231 MASE1 FT688_13325 PF13426 PAS domain FT688_13335 PF18429 Domain of unknown function (DUF5609) FT688_13355 PF07238 PilZ domain FT688_13360 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ FT688_13370 PF00216 Bacterial DNA-binding protein FT688_13385 PF01207 Dihydrouridine synthase (Dus) FT688_13390 PF01475 Ferric uptake regulator family FT688_13405 PF05525 Branched-chain amino acid transport protein FT688_13420 PF00271 Helicase conserved C-terminal domain FT688_13420 PF00270 DEAD/DEAH box helicase FT688_13425 PF03883 Peroxide stress protein YaaA FT688_13440 PF01168 Alanine racemase, N-terminal domain FT688_13450 PF02325 YGGT family FT688_13480 PF00132 Bacterial transferase hexapeptide (six repeats) FT688_13485 PF10952 Protein of unknown function (DUF2753) FT688_13490 PF00378 Enoyl-CoA hydratase/isomerase FT688_13505 PF00106 short chain dehydrogenase FT688_13510 PF04073 Aminoacyl-tRNA editing domain FT688_13510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FT688_13510 PF03129 Anticodon binding domain FT688_13515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_13515 PF00672 HAMP domain FT688_13520 PF01330 RuvA N terminal domain FT688_13520 PF07499 RuvA, C-terminal domain FT688_13525 PF05496 Holliday junction DNA helicase RuvB P-loop domain FT688_13525 PF17864 RuvB AAA lid domain FT688_13525 PF05491 RuvB C-terminal winged helix domain FT688_13530 PF01654 Cytochrome bd terminal oxidase subunit I FT688_13535 PF02322 Cytochrome bd terminal oxidase subunit II FT688_13540 PF08173 Membrane bound YbgT-like protein FT688_13545 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) FT688_13555 PF01618 MotA/TolQ/ExbB proton channel family FT688_13575 PF00691 OmpA family FT688_13660 PF02445 Quinolinate synthetase A protein FT688_13665 PF01263 Aldose 1-epimerase FT688_13670 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FT688_13670 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FT688_13690 PF01641 SelR domain FT688_13700 PF00293 NUDIX domain FT688_13710 PF02566 OsmC-like protein FT688_13715 PF01047 MarR family FT688_13745 PF07690 Major Facilitator Superfamily FT688_13800 PF00392 Bacterial regulatory proteins, gntR family FT688_13800 PF00155 Aminotransferase class I and II FT688_13820 PF07732 Multicopper oxidase FT688_13820 PF07731 Multicopper oxidase FT688_13820 PF00394 Multicopper oxidase FT688_13830 PF04074 YhcH/YjgK/YiaL FT688_13840 PF00924 Mechanosensitive ion channel FT688_13845 PF17969 L,D-transpeptidase C-terminal domain FT688_13845 PF03734 L,D-transpeptidase catalytic domain FT688_13850 PF00474 Sodium:solute symporter family FT688_13885 PF02525 Flavodoxin-like fold FT688_13890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_13890 PF03466 LysR substrate binding domain FT688_13905 PF12848 ABC transporter FT688_13905 PF00005 ABC transporter FT688_13915 PF01957 NfeD-like C-terminal, partner-binding FT688_13920 PF16200 C-terminal region of band_7 FT688_13920 PF01145 SPFH domain / Band 7 family FT688_13935 PF00009 Elongation factor Tu GTP binding domain FT688_13960 PF08447 PAS fold FT688_13960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_13980 PF00005 ABC transporter FT688_13995 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FT688_14015 PF00719 Inorganic pyrophosphatase FT688_14025 PF02441 Flavoprotein FT688_14035 PF00156 Phosphoribosyl transferase domain FT688_14040 PF00005 ABC transporter FT688_14045 PF01061 ABC-2 type transporter FT688_14050 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component FT688_14075 PF02569 Pantoate-beta-alanine ligase FT688_14085 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FT688_14090 PF01743 Poly A polymerase head domain FT688_14090 PF12626 Polymerase A arginine-rich C-terminus FT688_14090 PF12627 Probable RNA and SrmB- binding site of polymerase A FT688_14095 PF00749 tRNA synthetases class I (E and Q), catalytic domain FT688_14100 PF01258 Prokaryotic dksA/traR C4-type zinc finger FT688_14105 PF03749 Sugar fermentation stimulation protein RE domain FT688_14105 PF17746 SfsA N-terminal OB domain FT688_14125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FT688_14130 PF00893 Small Multidrug Resistance protein FT688_14135 PF00893 Small Multidrug Resistance protein FT688_14145 PF11849 Domain of unknown function (DUF3369) FT688_14155 PF01569 PAP2 superfamily FT688_14170 PF00202 Aminotransferase class-III FT688_14175 PF00654 Voltage gated chloride channel FT688_14185 PF01521 Iron-sulphur cluster biosynthesis FT688_14210 PF01810 LysE type translocator FT688_14215 PF02954 Bacterial regulatory protein, Fis family FT688_14220 PF01207 Dihydrouridine synthase (Dus) FT688_14230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FT688_14260 PF00072 Response regulator receiver domain FT688_14265 PF00854 POT family FT688_14270 PF00483 Nucleotidyl transferase FT688_14285 PF03795 YCII-related domain FT688_14290 PF04279 Intracellular septation protein A FT688_14295 PF00282 Pyridoxal-dependent decarboxylase conserved domain FT688_14305 PF06826 Predicted Permease Membrane Region FT688_14305 PF02080 TrkA-C domain FT688_14430 PF00072 Response regulator receiver domain FT688_14430 PF01584 CheW-like domain FT688_14435 PF13472 GDSL-like Lipase/Acylhydrolase family FT688_14440 PF00005 ABC transporter FT688_14450 PF01370 NAD dependent epimerase/dehydratase family FT688_14450 PF08338 Domain of unknown function (DUF1731) FT688_14460 PF00155 Aminotransferase class I and II FT688_14465 PF04389 Peptidase family M28 FT688_14465 PF01483 Proprotein convertase P-domain FT688_14475 PF04320 Protein with unknown function (DUF469) FT688_14480 PF04960 Glutaminase FT688_14485 PF00581 Rhodanese-like domain FT688_14495 PF06004 Bacterial protein of unknown function (DUF903) FT688_14535 PF06877 Regulator of ribonuclease activity B FT688_14540 PF03707 Bacterial signalling protein N terminal repeat FT688_14540 PF00990 Diguanylate cyclase, GGDEF domain FT688_14540 PF00563 EAL domain FT688_14565 PF02666 Phosphatidylserine decarboxylase FT688_14575 PF00929 Exonuclease FT688_14615 PF00313 'Cold-shock' DNA-binding domain FT688_14625 PF00672 HAMP domain FT688_14625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_14630 PF00749 tRNA synthetases class I (E and Q), catalytic domain FT688_14635 PF00749 tRNA synthetases class I (E and Q), catalytic domain FT688_14685 PF02472 Biopolymer transport protein ExbD/TolR FT688_14690 PF01618 MotA/TolQ/ExbB proton channel family FT688_14695 PF01618 MotA/TolQ/ExbB proton channel family FT688_14710 PF00528 Binding-protein-dependent transport system inner membrane component FT688_14730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FT688_14730 PF00005 ABC transporter FT688_14740 PF07687 Peptidase dimerisation domain FT688_14740 PF01546 Peptidase family M20/M25/M40 FT688_14750 PF00156 Phosphoribosyl transferase domain FT688_14755 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) FT688_14760 PF07417 Sigma factor-binding transcriptional regulator Crl FT688_14770 PF00171 Aldehyde dehydrogenase family FT688_14780 PF00582 Universal stress protein family FT688_14805 PF00194 Eukaryotic-type carbonic anhydrase FT688_14810 PF03150 Di-haem cytochrome c peroxidase FT688_14810 PF00034 Cytochrome c FT688_14845 PF00550 Phosphopantetheine attachment site FT688_14865 PF07977 FabA-like domain FT688_14925 PF00994 Probable molybdopterin binding domain FT688_14940 PF12821 Threonine/Serine exporter, ThrE FT688_14945 PF00186 Dihydrofolate reductase FT688_14955 PF00528 Binding-protein-dependent transport system inner membrane component FT688_14975 PF00258 Flavodoxin FT688_14975 PF00175 Oxidoreductase NAD-binding domain FT688_14975 PF00667 FAD binding domain FT688_14980 PF02567 Phenazine biosynthesis-like protein FT688_14985 PF00152 tRNA synthetases class II (D, K and N) FT688_14985 PF01336 OB-fold nucleic acid binding domain FT688_15005 PF00710 Asparaginase, N-terminal FT688_15005 PF17763 Glutaminase/Asparaginase C-terminal domain FT688_15010 PF07023 Protein of unknown function (DUF1315) FT688_15030 PF01343 Peptidase family S49 FT688_15040 PF00881 Nitroreductase family FT688_15045 PF14602 Hexapeptide repeat of succinyl-transferase FT688_15045 PF12464 Maltose acetyltransferase FT688_15050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FT688_15050 PF01842 ACT domain FT688_15050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FT688_15060 PF00107 Zinc-binding dehydrogenase FT688_15060 PF08240 Alcohol dehydrogenase GroES-like domain FT688_15070 PF00367 phosphotransferase system, EIIB FT688_15070 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FT688_15070 PF02378 Phosphotransferase system, EIIC FT688_15085 PF00289 Biotin carboxylase, N-terminal domain FT688_15085 PF02785 Biotin carboxylase C-terminal domain FT688_15085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FT688_15090 PF00364 Biotin-requiring enzyme FT688_15095 PF01220 Dehydroquinase class II FT688_15100 PF00501 AMP-binding enzyme FT688_15100 PF16177 Acetyl-coenzyme A synthetase N-terminus FT688_15100 PF13193 AMP-binding enzyme C-terminal domain FT688_15130 PF02613 Nitrate reductase delta subunit FT688_15140 PF00464 Serine hydroxymethyltransferase FT688_15150 PF03477 ATP cone domain FT688_15155 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FT688_15155 PF01872 RibD C-terminal domain FT688_15175 PF00885 6,7-dimethyl-8-ribityllumazine synthase FT688_15180 PF01029 NusB family FT688_15185 PF02769 AIR synthase related protein, C-terminal domain FT688_15185 PF00586 AIR synthase related protein, N-terminal domain FT688_15200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FT688_15210 PF12911 N-terminal TM domain of oligopeptide transport permease C FT688_15210 PF00528 Binding-protein-dependent transport system inner membrane component FT688_15215 PF02780 Transketolase, C-terminal domain FT688_15215 PF02779 Transketolase, pyrimidine binding domain FT688_15215 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FT688_15225 PF02609 Exonuclease VII small subunit FT688_15240 PF01272 Transcription elongation factor, GreA/GreB, C-term FT688_15240 PF03449 Transcription elongation factor, N-terminal FT688_15250 PF01985 CRS1 / YhbY (CRM) domain FT688_15260 PF00004 ATPase family associated with various cellular activities (AAA) FT688_15260 PF17862 AAA+ lid domain FT688_15260 PF06480 FtsH Extracellular FT688_15260 PF01434 Peptidase family M41 FT688_15275 PF00121 Triosephosphate isomerase FT688_15280 PF03840 Preprotein translocase SecG subunit FT688_15295 PF17384 RimP C-terminal SH3 domain FT688_15295 PF02576 RimP N-terminal domain FT688_15300 PF13184 NusA-like KH domain FT688_15300 PF00575 S1 RNA binding domain FT688_15300 PF08529 NusA N-terminal domain FT688_15310 PF02033 Ribosome-binding factor A FT688_15315 PF09157 Pseudouridine synthase II TruB, C-terminal FT688_15315 PF16198 tRNA pseudouridylate synthase B C-terminal domain FT688_15315 PF01509 TruB family pseudouridylate synthase (N terminal domain) FT688_15335 PF00563 EAL domain FT688_15335 PF00990 Diguanylate cyclase, GGDEF domain FT688_15335 PF03707 Bacterial signalling protein N terminal repeat FT688_15340 PF02635 DsrE/DsrF-like family FT688_15350 PF10415 Fumarase C C-terminus FT688_15350 PF00206 Lyase FT688_15355 PF03575 Peptidase family S51 FT688_15365 PF04397 LytTr DNA-binding domain FT688_15365 PF00072 Response regulator receiver domain FT688_15375 PF00072 Response regulator receiver domain FT688_15375 PF00196 Bacterial regulatory proteins, luxR family FT688_15385 PF13247 4Fe-4S dicluster domain FT688_15390 PF03916 Polysulphide reductase, NrfD FT688_15435 PF01523 Putative modulator of DNA gyrase FT688_15440 PF01523 Putative modulator of DNA gyrase FT688_15445 PF00258 Flavodoxin FT688_15450 PF00589 Phage integrase family FT688_15450 PF02899 Phage integrase, N-terminal SAM-like domain FT688_15455 PF00990 Diguanylate cyclase, GGDEF domain FT688_15470 PF17768 RecJ OB domain FT688_15470 PF02272 DHHA1 domain FT688_15470 PF01368 DHH family FT688_15475 PF13411 MerR HTH family regulatory protein FT688_15490 PF02508 Rnf-Nqr subunit, membrane protein FT688_15495 PF06821 Serine hydrolase FT688_15505 PF04055 Radical SAM superfamily FT688_15505 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FT688_15515 PF03099 Biotin/lipoate A/B protein ligase family FT688_15520 PF04359 Protein of unknown function (DUF493) FT688_15525 PF00768 D-alanyl-D-alanine carboxypeptidase FT688_15525 PF07943 Penicillin-binding protein 5, C-terminal domain FT688_15530 PF05036 Sporulation related domain FT688_15530 PF03330 Lytic transglycolase FT688_15540 PF01098 Cell cycle protein FT688_15550 PF02590 Predicted SPOUT methyltransferase FT688_15575 PF08264 Anticodon-binding domain of tRNA FT688_15575 PF13603 Leucyl-tRNA synthetase, Domain 2 FT688_15575 PF00133 tRNA synthetases class I (I, L, M and V) FT688_15580 PF07295 Zinc-ribbon containing domain FT688_15590 PF03471 Transporter associated domain FT688_15590 PF00571 CBS domain FT688_15595 PF02130 Uncharacterized protein family UPF0054 FT688_15600 PF02562 PhoH-like protein FT688_15615 PF00857 Isochorismatase family FT688_15620 PF00313 'Cold-shock' DNA-binding domain FT688_15625 PF05230 MASE2 domain FT688_15625 PF00990 Diguanylate cyclase, GGDEF domain FT688_15630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_15630 PF03466 LysR substrate binding domain FT688_15675 PF09285 Elongation factor P, C-terminal FT688_15675 PF08207 Elongation factor P (EF-P) KOW-like domain FT688_15675 PF01132 Elongation factor P (EF-P) OB domain FT688_15685 PF00478 IMP dehydrogenase / GMP reductase domain FT688_15700 PF00072 Response regulator receiver domain FT688_15700 PF00486 Transcriptional regulatory protein, C terminal FT688_15720 PF00501 AMP-binding enzyme FT688_15735 PF06224 Winged helix DNA-binding domain FT688_15755 PF02313 Fumarate reductase subunit D FT688_15760 PF02300 Fumarate reductase subunit C FT688_15765 PF13085 2Fe-2S iron-sulfur cluster binding domain FT688_15765 PF13183 4Fe-4S dicluster domain FT688_15770 PF02910 Fumarate reductase flavoprotein C-term FT688_15770 PF00890 FAD binding domain FT688_15775 PF02743 Cache domain FT688_15775 PF00672 HAMP domain FT688_15775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_15795 PF08525 Opacity-associated protein A N-terminal motif FT688_15795 PF01551 Peptidase family M23 FT688_15795 PF01476 LysM domain FT688_15810 PF03466 LysR substrate binding domain FT688_15810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_15830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_15830 PF03466 LysR substrate binding domain FT688_15835 PF00905 Penicillin binding protein transpeptidase domain FT688_15835 PF00912 Transglycosylase FT688_15835 PF17092 Penicillin-binding protein OB-like domain FT688_15840 PF11104 Type IV pilus assembly protein PilM; FT688_15865 PF01202 Shikimate kinase FT688_15870 PF01761 3-dehydroquinate synthase FT688_15890 PF13419 Haloacid dehalogenase-like hydrolase FT688_15895 PF00579 tRNA synthetases class I (W and Y) FT688_15905 PF00117 Glutamine amidotransferase class-I FT688_15910 PF00202 Aminotransferase class-III FT688_15915 PF04958 Arginine N-succinyltransferase beta subunit FT688_15920 PF00171 Aldehyde dehydrogenase family FT688_15930 PF13419 Haloacid dehalogenase-like hydrolase FT688_15960 PF04266 ASCH domain FT688_15970 PF01048 Phosphorylase superfamily FT688_15980 PF02080 TrkA-C domain FT688_15980 PF03600 Citrate transporter FT688_16025 PF06071 Protein of unknown function (DUF933) FT688_16025 PF01926 50S ribosome-binding GTPase FT688_16040 PF14572 Phosphoribosyl synthetase-associated domain FT688_16040 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FT688_16050 PF08544 GHMP kinases C terminal FT688_16050 PF00288 GHMP kinases N terminal domain FT688_16055 PF03550 Outer membrane lipoprotein LolB FT688_16060 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FT688_16060 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FT688_16060 PF01488 Shikimate / quinate 5-dehydrogenase FT688_16065 PF00472 RF-1 domain FT688_16065 PF03462 PCRF domain FT688_16070 PF17827 PrmC N-terminal domain FT688_16070 PF13847 Methyltransferase domain FT688_16080 PF13369 Transglutaminase-like superfamily FT688_16090 PF00375 Sodium:dicarboxylate symporter family FT688_16095 PF01228 Glycine radical FT688_16115 PF00923 Transaldolase/Fructose-6-phosphate aldolase FT688_16120 PF01235 Sodium:alanine symporter family FT688_16135 PF17863 AAA lid domain FT688_16135 PF07726 ATPase family associated with various cellular activities (AAA) FT688_16150 PF03652 Holliday junction resolvase FT688_16170 PF04452 RNA methyltransferase FT688_16175 PF04231 Endonuclease I FT688_16180 PF17283 SprT-like zinc ribbon domain FT688_16180 PF10263 SprT-like family FT688_16185 PF02773 S-adenosylmethionine synthetase, C-terminal domain FT688_16185 PF02772 S-adenosylmethionine synthetase, central domain FT688_16185 PF00438 S-adenosylmethionine synthetase, N-terminal domain FT688_16200 PF01042 Endoribonuclease L-PSP FT688_16210 PF01965 DJ-1/PfpI family FT688_16225 PF00579 tRNA synthetases class I (W and Y) FT688_16240 PF01161 Phosphatidylethanolamine-binding protein FT688_16245 PF00709 Adenylosuccinate synthetase FT688_16250 PF03466 LysR substrate binding domain FT688_16250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_16260 PF00155 Aminotransferase class I and II FT688_16265 PF07690 Major Facilitator Superfamily FT688_16270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_16270 PF03466 LysR substrate binding domain FT688_16275 PF00106 short chain dehydrogenase FT688_16280 PF08496 Peptidase family S49 N-terminal FT688_16280 PF01343 Peptidase family S49 FT688_16290 PF01396 Topoisomerase DNA binding C4 zinc finger FT688_16290 PF01751 Toprim domain FT688_16290 PF01131 DNA topoisomerase FT688_16290 PF08272 Topoisomerase I zinc-ribbon-like FT688_16305 PF08447 PAS fold FT688_16305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_16315 PF01869 BadF/BadG/BcrA/BcrD ATPase family FT688_16330 PF00005 ABC transporter FT688_16330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FT688_16335 PF12911 N-terminal TM domain of oligopeptide transport permease C FT688_16335 PF00528 Binding-protein-dependent transport system inner membrane component FT688_16345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FT688_16370 PF10725 Protein of unknown function (DUF2517) FT688_16415 PF04632 Fusaric acid resistance protein family FT688_16425 PF12804 MobA-like NTP transferase domain FT688_16435 PF00528 Binding-protein-dependent transport system inner membrane component FT688_16440 PF12849 PBP superfamily domain FT688_16445 PF00158 Sigma-54 interaction domain FT688_16445 PF00072 Response regulator receiver domain FT688_16445 PF02954 Bacterial regulatory protein, Fis family FT688_16450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FT688_16450 PF00512 His Kinase A (phospho-acceptor) domain FT688_16450 PF00989 PAS fold FT688_16460 PF02634 FdhD/NarQ family FT688_16535 PF00860 Permease family FT688_16550 PF12794 Mechanosensitive ion channel inner membrane domain 1 FT688_16550 PF12795 Mechanosensitive ion channel porin domain FT688_16550 PF00924 Mechanosensitive ion channel FT688_16555 PF00224 Pyruvate kinase, barrel domain FT688_16555 PF02887 Pyruvate kinase, alpha/beta domain FT688_16570 PF02254 TrkA-N domain FT688_16570 PF00999 Sodium/hydrogen exchanger family FT688_16580 PF04381 Putative exonuclease, RdgC FT688_16595 PF13476 AAA domain FT688_16630 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FT688_16635 PF00391 PEP-utilising enzyme, mobile domain FT688_16635 PF05524 PEP-utilising enzyme, N-terminal FT688_16635 PF02896 PEP-utilising enzyme, TIM barrel domain FT688_16640 PF00381 PTS HPr component phosphorylation site FT688_16645 PF00291 Pyridoxal-phosphate dependent enzyme FT688_16660 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FT688_16660 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FT688_16705 PF00072 Response regulator receiver domain FT688_16705 PF00486 Transcriptional regulatory protein, C terminal FT688_16715 PF03737 Aldolase/RraA FT688_16735 PF00588 SpoU rRNA Methylase family FT688_16745 PF13840 ACT domain FT688_16745 PF00742 Homoserine dehydrogenase FT688_16745 PF01842 ACT domain FT688_16745 PF00696 Amino acid kinase family FT688_16745 PF03447 Homoserine dehydrogenase, NAD binding domain FT688_16755 PF00291 Pyridoxal-phosphate dependent enzyme FT688_16755 PF14821 Threonine synthase N terminus FT688_16795 PF01048 Phosphorylase superfamily FT688_16825 PF02690 Na+/Pi-cotransporter FT688_16835 PF13520 Amino acid permease FT688_16840 PF00324 Amino acid permease FT688_16855 PF07883 Cupin domain FT688_16855 PF01381 Helix-turn-helix FT688_16860 PF01266 FAD dependent oxidoreductase FT688_16895 PF00816 H-NS histone family FT688_16900 PF00793 DAHP synthetase I family FT688_16915 PF12704 MacB-like periplasmic core domain FT688_16915 PF02687 FtsX-like permease family FT688_16915 PF00005 ABC transporter FT688_16945 PF01025 GrpE FT688_16950 PF00012 Hsp70 protein FT688_16955 PF00226 DnaJ domain FT688_16955 PF01556 DnaJ C terminal domain FT688_16955 PF00684 DnaJ central domain FT688_16960 PF02264 LamB porin FT688_16960 PF11471 Maltoporin periplasmic N-terminal extension FT688_16965 PF00294 pfkB family carbohydrate kinase FT688_16970 PF02378 Phosphotransferase system, EIIC FT688_16970 PF00367 phosphotransferase system, EIIB FT688_16985 PF02308 MgtC family FT688_17005 PF04143 Sulphur transport FT688_17025 PF00563 EAL domain FT688_17025 PF00990 Diguanylate cyclase, GGDEF domain FT688_17025 PF03707 Bacterial signalling protein N terminal repeat FT688_17055 PF00529 HlyD membrane-fusion protein of T1SS FT688_17055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FT688_17070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FT688_17075 PF03372 Endonuclease/Exonuclease/phosphatase family FT688_17100 PF00127 Copper binding proteins, plastocyanin/azurin family FT688_17140 PF06481 COX Aromatic Rich Motif FT688_17140 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FT688_17150 PF00510 Cytochrome c oxidase subunit III FT688_17155 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FT688_17160 PF01040 UbiA prenyltransferase family FT688_17180 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FT688_17185 PF00528 Binding-protein-dependent transport system inner membrane component FT688_17195 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FT688_17240 PF00291 Pyridoxal-phosphate dependent enzyme FT688_17245 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FT688_17245 PF00218 Indole-3-glycerol phosphate synthase FT688_17265 PF02811 PHP domain FT688_17270 PF01300 Telomere recombination FT688_17285 PF01479 S4 domain FT688_17285 PF00849 RNA pseudouridylate synthase FT688_17335 PF05523 WxcM-like, C-terminal FT688_17340 PF00132 Bacterial transferase hexapeptide (six repeats) FT688_17345 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FT688_17365 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) FT688_17370 PF00534 Glycosyl transferases group 1 FT688_17370 PF13439 Glycosyltransferase Family 4 FT688_17375 PF13477 Glycosyl transferase 4-like FT688_17375 PF00534 Glycosyl transferases group 1 FT688_17380 PF01370 NAD dependent epimerase/dehydratase family FT688_17385 PF02397 Bacterial sugar transferase FT688_17390 PF02719 Polysaccharide biosynthesis protein FT688_17395 PF04321 RmlD substrate binding domain FT688_17400 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FT688_17405 PF02706 Chain length determinant protein FT688_17415 PF04337 Protein of unknown function, DUF480 FT688_17425 PF05472 DNA replication terminus site-binding protein (Ter protein) FT688_17440 PF00676 Dehydrogenase E1 component FT688_17455 PF00313 'Cold-shock' DNA-binding domain FT688_17485 PF08220 DeoR-like helix-turn-helix domain FT688_17485 PF00455 DeoR C terminal sensor domain FT688_17495 PF04055 Radical SAM superfamily FT688_17510 PF01966 HD domain FT688_17510 PF11871 Domain of unknown function (DUF3391) FT688_17515 PF00849 RNA pseudouridylate synthase FT688_17515 PF01479 S4 domain FT688_17545 PF13144 Chaperone for flagella basal body P-ring formation FT688_17550 PF01584 CheW-like domain FT688_17550 PF00072 Response regulator receiver domain FT688_17555 PF01739 CheR methyltransferase, SAM binding domain FT688_17555 PF03705 CheR methyltransferase, all-alpha domain FT688_17560 PF00460 Flagella basal body rod protein FT688_17565 PF00460 Flagella basal body rod protein FT688_17565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FT688_17580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FT688_17580 PF00460 Flagella basal body rod protein FT688_17585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FT688_17585 PF00460 Flagella basal body rod protein FT688_17590 PF02107 Flagellar L-ring protein FT688_17595 PF02119 Flagellar P-ring protein FT688_17600 PF10135 Rod binding protein FT688_17600 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FT688_17620 PF02541 Ppx/GppA phosphatase family FT688_17625 PF13090 Polyphosphate kinase C-terminal domain 2 FT688_17625 PF02503 Polyphosphate kinase middle domain FT688_17625 PF13089 Polyphosphate kinase N-terminal domain FT688_17625 PF17941 Polyphosphate kinase C-terminal domain 1 FT688_17630 PF01842 ACT domain FT688_17640 PF06490 Flagellar regulatory protein FleQ FT688_17640 PF02954 Bacterial regulatory protein, Fis family FT688_17640 PF00158 Sigma-54 interaction domain FT688_17645 PF00512 His Kinase A (phospho-acceptor) domain FT688_17645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FT688_17645 PF13188 PAS domain FT688_17665 PF00586 AIR synthase related protein, N-terminal domain FT688_17665 PF02769 AIR synthase related protein, C-terminal domain FT688_17685 PF00463 Isocitrate lyase family FT688_17690 PF01274 Malate synthase FT688_17700 PF14437 MafB19-like deaminase FT688_17715 PF00005 ABC transporter FT688_17720 PF01895 PhoU domain FT688_17725 PF03471 Transporter associated domain FT688_17725 PF01595 Cyclin M transmembrane N-terminal domain FT688_17725 PF00571 CBS domain FT688_17735 PF02965 Vitamin B12 dependent methionine synthase, activation domain FT688_17735 PF02310 B12 binding domain FT688_17735 PF02607 B12 binding domain FT688_17735 PF02574 Homocysteine S-methyltransferase FT688_17735 PF00809 Pterin binding enzyme FT688_17740 PF13520 Amino acid permease FT688_17745 PF04116 Fatty acid hydroxylase superfamily FT688_17765 PF00528 Binding-protein-dependent transport system inner membrane component FT688_17780 PF07690 Major Facilitator Superfamily FT688_17785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FT688_17785 PF07730 Histidine kinase FT688_17785 PF05231 MASE1 FT688_17795 PF01272 Transcription elongation factor, GreA/GreB, C-term FT688_17795 PF14760 Rnk N-terminus FT688_17820 PF00245 Alkaline phosphatase FT688_17825 PF01926 50S ribosome-binding GTPase FT688_17830 PF07690 Major Facilitator Superfamily FT688_17835 PF00850 Histone deacetylase domain FT688_17845 PF13307 Helicase C-terminal domain FT688_17845 PF06733 DEAD_2 FT688_17850 PF13609 Gram-negative porin FT688_17860 PF00155 Aminotransferase class I and II FT688_17890 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FT688_17895 PF03966 Trm112p-like protein FT688_17900 PF02348 Cytidylyltransferase FT688_17905 PF00072 Response regulator receiver domain FT688_17905 PF00196 Bacterial regulatory proteins, luxR family FT688_17915 PF01066 CDP-alcohol phosphatidyltransferase FT688_17940 PF13426 PAS domain FT688_17940 PF08447 PAS fold FT688_17940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_17950 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB FT688_17955 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) FT688_17995 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FT688_18000 PF09190 DALR domain FT688_18000 PF01406 tRNA synthetases class I (C) catalytic domain FT688_18055 PF01169 Uncharacterized protein family UPF0016 FT688_18120 PF00793 DAHP synthetase I family FT688_18125 PF01219 Prokaryotic diacylglycerol kinase FT688_18135 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FT688_18140 PF01812 5-formyltetrahydrofolate cyclo-ligase family FT688_18150 PF01113 Dihydrodipicolinate reductase, N-terminus FT688_18150 PF05173 Dihydrodipicolinate reductase, C-terminus FT688_18155 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FT688_18155 PF00117 Glutamine amidotransferase class-I FT688_18160 PF02142 MGS-like domain FT688_18160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FT688_18160 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FT688_18165 PF00682 HMGL-like FT688_18165 PF08502 LeuA allosteric (dimerisation) domain FT688_18170 PF07759 Protein of unknown function (DUF1615) FT688_18180 PF08378 Nuclease-related domain FT688_18200 PF13302 Acetyltransferase (GNAT) domain FT688_18205 PF00270 DEAD/DEAH box helicase FT688_18205 PF00271 Helicase conserved C-terminal domain FT688_18215 PF14521 Lysine-specific metallo-endopeptidase FT688_18230 PF00376 MerR family regulatory protein FT688_18230 PF09278 MerR, DNA binding FT688_18250 PF00528 Binding-protein-dependent transport system inner membrane component FT688_18260 PF07992 Pyridine nucleotide-disulphide oxidoreductase FT688_18260 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FT688_18270 PF16199 Radical_SAM C-terminal domain FT688_18270 PF04055 Radical SAM superfamily FT688_18325 PF00324 Amino acid permease FT688_18340 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FT688_18340 PF00391 PEP-utilising enzyme, mobile domain FT688_18340 PF02896 PEP-utilising enzyme, TIM barrel domain FT688_18360 PF00082 Subtilase family FT688_18360 PF01483 Proprotein convertase P-domain FT688_18380 PF03180 NLPA lipoprotein FT688_18385 PF01569 PAP2 superfamily FT688_18410 PF01039 Carboxyl transferase domain FT688_18410 PF17848 Acetyl-coA carboxylase zinc finger domain FT688_18415 PF02875 Mur ligase family, glutamate ligase domain FT688_18415 PF08245 Mur ligase middle domain FT688_18420 PF05036 Sporulation related domain FT688_18425 PF04358 DsrC like protein FT688_18435 PF01027 Inhibitor of apoptosis-promoting Bax1 FT688_18465 PF09924 Uncharacterised conserved protein (DUF2156) FT688_18465 PF03706 Lysylphosphatidylglycerol synthase TM region FT688_18480 PF00990 Diguanylate cyclase, GGDEF domain FT688_18480 PF13426 PAS domain FT688_18480 PF00563 EAL domain FT688_18485 PF00849 RNA pseudouridylate synthase FT688_18500 PF04209 homogentisate 1,2-dioxygenase FT688_18510 PF14497 Glutathione S-transferase, C-terminal domain FT688_18510 PF02798 Glutathione S-transferase, N-terminal domain FT688_18525 PF13537 Glutamine amidotransferase domain FT688_18525 PF00733 Asparagine synthase FT688_18540 PF02254 TrkA-N domain FT688_18540 PF00999 Sodium/hydrogen exchanger family FT688_18545 PF13344 Haloacid dehalogenase-like hydrolase FT688_18550 PF00962 Adenosine/AMP deaminase FT688_18555 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FT688_18560 PF03471 Transporter associated domain FT688_18560 PF03741 Integral membrane protein TerC family FT688_18570 PF02913 FAD linked oxidases, C-terminal domain FT688_18570 PF01565 FAD binding domain FT688_18570 PF13183 4Fe-4S dicluster domain FT688_18580 PF03061 Thioesterase superfamily FT688_18585 PF00270 DEAD/DEAH box helicase FT688_18585 PF00271 Helicase conserved C-terminal domain FT688_18585 PF03880 DbpA RNA binding domain FT688_18595 PF00929 Exonuclease FT688_18600 PF12729 Four helix bundle sensory module for signal transduction FT688_18600 PF00672 HAMP domain FT688_18600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_18605 PF18393 MotY N-terminal domain FT688_18605 PF00691 OmpA family FT688_18610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FT688_18645 PF02508 Rnf-Nqr subunit, membrane protein FT688_18650 PF00892 EamA-like transporter family FT688_18670 PF07055 Enoyl reductase FAD binding domain FT688_18670 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FT688_18670 PF12241 Trans-2-enoyl-CoA reductase catalytic region FT688_18675 PF03606 C4-dicarboxylate anaerobic carrier FT688_18680 PF00155 Aminotransferase class I and II FT688_18690 PF00462 Glutaredoxin FT688_18705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FT688_18705 PF00529 HlyD membrane-fusion protein of T1SS FT688_18710 PF11742 Protein of unknown function (DUF3302) FT688_18715 PF02554 Carbon starvation protein CstA FT688_18720 PF00072 Response regulator receiver domain FT688_18720 PF04397 LytTr DNA-binding domain FT688_18730 PF01966 HD domain FT688_18745 PF01914 MarC family integral membrane protein FT688_18750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FT688_18755 PF00528 Binding-protein-dependent transport system inner membrane component FT688_18760 PF00528 Binding-protein-dependent transport system inner membrane component FT688_18760 PF12911 N-terminal TM domain of oligopeptide transport permease C FT688_18765 PF00005 ABC transporter FT688_18765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FT688_18775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FT688_18775 PF00005 ABC transporter FT688_18780 PF03741 Integral membrane protein TerC family FT688_18785 PF01168 Alanine racemase, N-terminal domain FT688_18785 PF00842 Alanine racemase, C-terminal domain FT688_18795 PF00375 Sodium:dicarboxylate symporter family FT688_18810 PF01979 Amidohydrolase family FT688_18825 PF01230 HIT domain FT688_18865 PF02355 Protein export membrane protein FT688_18865 PF07549 SecD/SecF GG Motif FT688_18895 PF05728 Uncharacterised protein family (UPF0227) FT688_18900 PF07992 Pyridine nucleotide-disulphide oxidoreductase FT688_18920 PF01906 Putative heavy-metal-binding FT688_18940 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FT688_18940 PF00175 Oxidoreductase NAD-binding domain FT688_18945 PF17179 4Fe-4S dicluster domain FT688_18950 PF01734 Patatin-like phospholipase FT688_18970 PF00696 Amino acid kinase family FT688_18970 PF01842 ACT domain FT688_18980 PF01625 Peptide methionine sulfoxide reductase FT688_18995 PF00583 Acetyltransferase (GNAT) family FT688_19005 PF00561 alpha/beta hydrolase fold FT688_19010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FT688_19040 PF02589 LUD domain FT688_19045 PF01565 FAD binding domain FT688_19045 PF02913 FAD linked oxidases, C-terminal domain FT688_19070 PF00005 ABC transporter FT688_19095 PF01593 Flavin containing amine oxidoreductase FT688_19100 PF03239 Iron permease FTR1 family FT688_19115 PF03350 Uncharacterized protein family, UPF0114 FT688_19130 PF01740 STAS domain FT688_19130 PF00916 Sulfate permease family FT688_19155 PF12729 Four helix bundle sensory module for signal transduction FT688_19155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_19155 PF00672 HAMP domain FT688_19175 PF01584 CheW-like domain FT688_19195 PF00158 Sigma-54 interaction domain FT688_19195 PF00072 Response regulator receiver domain FT688_19195 PF02954 Bacterial regulatory protein, Fis family FT688_19205 PF13247 4Fe-4S dicluster domain FT688_19240 PF00528 Binding-protein-dependent transport system inner membrane component FT688_19240 PF12911 N-terminal TM domain of oligopeptide transport permease C FT688_19250 PF00005 ABC transporter FT688_19250 PF08402 TOBE domain FT688_19260 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FT688_19270 PF01924 Hydrogenase formation hypA family FT688_19275 PF01455 HupF/HypC family FT688_19300 PF07450 Formate hydrogenlyase maturation protein HycH FT688_19305 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FT688_19315 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FT688_19315 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FT688_19315 PF00374 Nickel-dependent hydrogenase FT688_19330 PF12798 4Fe-4S binding domain FT688_19330 PF00037 4Fe-4S binding domain FT688_19345 PF13247 4Fe-4S dicluster domain FT688_19345 PF12800 4Fe-4S binding domain FT688_19365 PF02634 FdhD/NarQ family FT688_19370 PF13662 Toprim domain FT688_19370 PF02132 RecR protein FT688_19380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FT688_19380 PF00183 Hsp90 protein FT688_19390 PF05191 Adenylate kinase, active site lid FT688_19395 PF00762 Ferrochelatase FT688_19400 PF01124 MAPEG family FT688_19405 PF00294 pfkB family carbohydrate kinase FT688_19435 PF07273 Protein of unknown function (DUF1439) FT688_19440 PF00425 chorismate binding enzyme FT688_19450 PF00857 Isochorismatase family FT688_19450 PF00550 Phosphopantetheine attachment site FT688_19480 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FT688_19480 PF01648 4'-phosphopantetheinyl transferase superfamily FT688_19515 PF11143 Protein of unknown function (DUF2919) FT688_19520 PF01544 CorA-like Mg2+ transporter protein FT688_19540 PF00266 Aminotransferase class-V FT688_19545 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FT688_19550 PF00793 DAHP synthetase I family FT688_19555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_19555 PF00672 HAMP domain FT688_19565 PF02601 Exonuclease VII, large subunit FT688_19565 PF13742 OB-fold nucleic acid binding domain FT688_19600 PF00958 GMP synthase C terminal domain FT688_19600 PF02540 NAD synthase FT688_19600 PF00117 Glutamine amidotransferase class-I FT688_19645 PF00239 Resolvase, N terminal domain FT688_19645 PF02796 Helix-turn-helix domain of resolvase FT688_19670 PF02805 Metal binding domain of Ada FT688_19670 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FT688_19670 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FT688_19670 PF12833 Helix-turn-helix domain FT688_19695 PF00300 Histidine phosphatase superfamily (branch 1) FT688_19735 PF00005 ABC transporter FT688_19760 PF05697 Bacterial trigger factor protein (TF) FT688_19760 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FT688_19760 PF05698 Bacterial trigger factor protein (TF) C-terminus FT688_19770 PF06689 ClpX C4-type zinc finger FT688_19770 PF10431 C-terminal, D2-small domain, of ClpB protein FT688_19770 PF07724 AAA domain (Cdc48 subfamily) FT688_19775 PF00004 ATPase family associated with various cellular activities (AAA) FT688_19775 PF02190 ATP-dependent protease La (LON) substrate-binding domain FT688_19775 PF05362 Lon protease (S16) C-terminal proteolytic domain FT688_19780 PF00216 Bacterial DNA-binding protein FT688_19785 PF13145 PPIC-type PPIASE domain FT688_19790 PF00005 ABC transporter FT688_19790 PF12848 ABC transporter FT688_19795 PF00474 Sodium:solute symporter family FT688_19880 PF00682 HMGL-like FT688_19890 PF00378 Enoyl-CoA hydratase/isomerase FT688_19935 PF13520 Amino acid permease FT688_19940 PF01925 Sulfite exporter TauE/SafE FT688_19950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_19950 PF03466 LysR substrate binding domain FT688_19955 PF00248 Aldo/keto reductase family FT688_19970 PF07694 5TMR of 5TMR-LYT FT688_19970 PF00990 Diguanylate cyclase, GGDEF domain FT688_19980 PF00232 Glycosyl hydrolase family 1 FT688_19985 PF03707 Bacterial signalling protein N terminal repeat FT688_19985 PF00990 Diguanylate cyclase, GGDEF domain FT688_19985 PF00563 EAL domain FT688_19985 PF13188 PAS domain FT688_19995 PF01966 HD domain FT688_20040 PF03279 Bacterial lipid A biosynthesis acyltransferase FT688_20045 PF03279 Bacterial lipid A biosynthesis acyltransferase FT688_20060 PF17151 Periplasmic sensor domain FT688_20060 PF00990 Diguanylate cyclase, GGDEF domain FT688_20100 PF01554 MatE FT688_20105 PF06786 Uncharacterised protein family (UPF0253) FT688_20120 PF13419 Haloacid dehalogenase-like hydrolase FT688_20125 PF01370 NAD dependent epimerase/dehydratase family FT688_20125 PF02222 ATP-grasp domain FT688_20130 PF00892 EamA-like transporter family FT688_20135 PF02525 Flavodoxin-like fold FT688_20160 PF17783 CvfB-like winged helix domain FT688_20160 PF13509 S1 domain FT688_20175 PF00912 Transglycosylase FT688_20180 PF04269 Protein of unknown function, DUF440 FT688_20190 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FT688_20200 PF05166 YcgL domain FT688_20205 PF13406 Transglycosylase SLT domain FT688_20210 PF03315 Serine dehydratase beta chain FT688_20210 PF03313 Serine dehydratase alpha chain FT688_20220 PF03315 Serine dehydratase beta chain FT688_20220 PF03313 Serine dehydratase alpha chain FT688_20225 PF06865 Pyrimidine/purine nucleoside phosphorylase FT688_20235 PF09278 MerR, DNA binding FT688_20235 PF00376 MerR family regulatory protein FT688_20240 PF02803 Thiolase, C-terminal domain FT688_20240 PF00108 Thiolase, N-terminal domain FT688_20250 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FT688_20255 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FT688_20295 PF07726 ATPase family associated with various cellular activities (AAA) FT688_20295 PF17863 AAA lid domain FT688_20300 PF02803 Thiolase, C-terminal domain FT688_20300 PF00108 Thiolase, N-terminal domain FT688_20315 PF07152 YaeQ protein FT688_20325 PF13188 PAS domain FT688_20325 PF00158 Sigma-54 interaction domain FT688_20325 PF02954 Bacterial regulatory protein, Fis family FT688_20335 PF00291 Pyridoxal-phosphate dependent enzyme FT688_20340 PF01546 Peptidase family M20/M25/M40 FT688_20340 PF07687 Peptidase dimerisation domain FT688_20350 PF00696 Amino acid kinase family FT688_20355 PF00892 EamA-like transporter family FT688_20360 PF13478 XdhC Rossmann domain FT688_20360 PF02625 XdhC and CoxI family FT688_20370 PF12804 MobA-like NTP transferase domain FT688_20400 PF01979 Amidohydrolase family FT688_20420 PF00111 2Fe-2S iron-sulfur cluster binding domain FT688_20420 PF01799 [2Fe-2S] binding domain FT688_20455 PF01502 Phosphoribosyl-AMP cyclohydrolase FT688_20455 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FT688_20460 PF00977 Histidine biosynthesis protein FT688_20465 PF01627 Hpt domain FT688_20465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FT688_20465 PF00072 Response regulator receiver domain FT688_20465 PF00512 His Kinase A (phospho-acceptor) domain FT688_20470 PF08448 PAS fold FT688_20470 PF00990 Diguanylate cyclase, GGDEF domain FT688_20485 PF00117 Glutamine amidotransferase class-I FT688_20525 PF00814 Glycoprotease family FT688_20535 PF08241 Methyltransferase domain FT688_20535 PF12697 Alpha/beta hydrolase family FT688_20540 PF00501 AMP-binding enzyme FT688_20540 PF13193 AMP-binding enzyme C-terminal domain FT688_20545 PF01612 3'-5' exonuclease FT688_20545 PF00570 HRDC domain FT688_20565 PF04304 Protein of unknown function (DUF454) FT688_20570 PF00156 Phosphoribosyl transferase domain FT688_20580 PF02575 YbaB/EbfC DNA-binding family FT688_20585 PF00589 Phage integrase family FT688_20585 PF12167 Arm DNA-binding domain FT688_20595 PF01906 Putative heavy-metal-binding FT688_20725 PF13391 HNH endonuclease FT688_20740 PF05772 NinB protein FT688_20770 PF00717 Peptidase S24-like FT688_20940 PF00072 Response regulator receiver domain FT688_20940 PF00196 Bacterial regulatory proteins, luxR family FT688_20945 PF01368 DHH family FT688_20945 PF02272 DHHA1 domain FT688_20945 PF01743 Poly A polymerase head domain FT688_20945 PF00571 CBS domain FT688_20960 PF01386 Ribosomal L25p family FT688_20970 PF00072 Response regulator receiver domain FT688_20975 PF00753 Metallo-beta-lactamase superfamily FT688_21010 PF10672 S-adenosylmethionine-dependent methyltransferase FT688_21010 PF17785 PUA-like domain FT688_21020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FT688_21020 PF00672 HAMP domain FT688_21020 PF12729 Four helix bundle sensory module for signal transduction FT688_21030 PF02798 Glutathione S-transferase, N-terminal domain FT688_21030 PF00043 Glutathione S-transferase, C-terminal domain FT688_21035 PF09334 tRNA synthetases class I (M) FT688_21035 PF08264 Anticodon-binding domain of tRNA FT688_21035 PF01588 Putative tRNA binding domain FT688_21040 PF10609 NUBPL iron-transfer P-loop NTPase FT688_21060 PF01384 Phosphate transporter family FT688_21065 PF12111 Polyribonucleotide phosphorylase C terminal FT688_21065 PF00575 S1 RNA binding domain FT688_21065 PF10150 Ribonuclease E/G family FT688_21075 PF13419 Haloacid dehalogenase-like hydrolase FT688_21085 PF07690 Major Facilitator Superfamily FT688_21105 PF02620 Large ribosomal RNA subunit accumulation protein YceD FT688_21110 PF01783 Ribosomal L32p protein family FT688_21115 PF02504 Fatty acid synthesis protein FT688_21120 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FT688_21120 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FT688_21125 PF00698 Acyl transferase domain FT688_21135 PF00550 Phosphopantetheine attachment site FT688_21145 PF01063 Amino-transferase class IV FT688_21150 PF02618 YceG-like family FT688_21155 PF02223 Thymidylate kinase FT688_21160 PF09115 DNA polymerase III, delta subunit, C terminal FT688_21165 PF01026 TatD related DNase FT688_21170 PF00589 Phage integrase family FT688_21180 PF01189 16S rRNA methyltransferase RsmB/F FT688_21180 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF FT688_21180 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FT688_21190 PF04403 Paraquat-inducible protein A FT688_21205 PF00285 Citrate synthase, C-terminal domain FT688_21225 PF06974 Protein of unknown function (DUF1298) FT688_21225 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain FT688_21260 PF07130 YebG protein FT688_21275 PF07977 FabA-like domain FT688_21280 PF04957 Ribosome modulation factor FT688_21300 PF01170 Putative RNA methylase family UPF0020 FT688_21300 PF02926 THUMP domain FT688_21300 PF10672 S-adenosylmethionine-dependent methyltransferase FT688_21305 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP FT688_21310 PF07126 Cell-division protein ZapC FT688_21315 PF01180 Dihydroorotate dehydrogenase FT688_21330 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FT688_21330 PF11940 Domain of unknown function (DUF3458) Ig-like fold FT688_21330 PF01433 Peptidase family M1 domain FT688_21335 PF17804 Tail specific protease N-terminal domain FT688_21335 PF03572 Peptidase family S41 FT688_21335 PF00595 PDZ domain FT688_21335 PF11818 C-terminal domain of tail specific protease (DUF3340) FT688_21340 PF04352 ProQ/FINO family FT688_21340 PF17516 ProQ C-terminal domain FT688_21345 PF13185 GAF domain FT688_21355 PF00115 Cytochrome C and Quinol oxidase polypeptide I FT688_21370 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FT688_21370 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FT688_21395 PF00027 Cyclic nucleotide-binding domain FT688_21395 PF13545 Crp-like helix-turn-helix domain FT688_21405 PF01171 PP-loop family FT688_21425 PF05025 RbsD / FucU transport protein family FT688_21430 PF00005 ABC transporter FT688_21440 PF13407 Periplasmic binding protein domain FT688_21445 PF00294 pfkB family carbohydrate kinase FT688_21465 PF02146 Sir2 family FT688_21485 PF00216 Bacterial DNA-binding protein FT688_21495 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FT688_21495 PF01409 tRNA synthetases class II core domain (F) FT688_21500 PF00453 Ribosomal protein L20 FT688_21505 PF01632 Ribosomal protein L35 FT688_21510 PF05198 Translation initiation factor IF-3, N-terminal domain FT688_21510 PF00707 Translation initiation factor IF-3, C-terminal domain FT688_21530 PF00521 DNA gyrase/topoisomerase IV, subunit A FT688_21530 PF03989 DNA gyrase C-terminal domain, beta-propeller FT688_21540 PF13419 Haloacid dehalogenase-like hydrolase FT688_21555 PF00111 2Fe-2S iron-sulfur cluster binding domain FT688_21560 PF03562 MltA specific insert domain FT688_21560 PF06725 3D domain FT688_21565 PF06945 Protein of unknown function (DUF1289) FT688_21575 PF03613 PTS system mannose/fructose/sorbose family IID component FT688_21580 PF03609 PTS system sorbose-specific iic component FT688_21585 PF03830 PTS system sorbose subfamily IIB component FT688_21585 PF03610 PTS system fructose IIA component FT688_21605 PF06560 Glucose-6-phosphate isomerase (GPI) FT688_21645 PF00270 DEAD/DEAH box helicase FT688_21645 PF00271 Helicase conserved C-terminal domain FT688_21675 PF00990 Diguanylate cyclase, GGDEF domain FT688_21675 PF08448 PAS fold FT688_21695 PF00704 Glycosyl hydrolases family 18 FT688_21695 PF08329 Chitinase A, N-terminal domain FT688_21705 PF03831 PhnA domain FT688_21705 PF08274 PhnA Zinc-Ribbon FT688_21750 PF01327 Polypeptide deformylase FT688_21765 PF03330 Lytic transglycolase FT688_21765 PF05036 Sporulation related domain FT688_21775 PF04288 MukE-like family FT688_21780 PF17193 MukF C-terminal domain FT688_21780 PF17192 MukF middle domain FT688_21780 PF03882 MukF winged-helix domain FT688_21785 PF13847 Methyltransferase domain FT688_21795 PF00121 Triosephosphate isomerase FT688_21800 PF00365 Phosphofructokinase FT688_21805 PF01546 Peptidase family M20/M25/M40 FT688_21805 PF07687 Peptidase dimerisation domain FT688_21810 PF13419 Haloacid dehalogenase-like hydrolase FT688_21875 PF14525 AraC-binding-like domain FT688_21875 PF12833 Helix-turn-helix domain FT688_21895 PF03942 DTW domain FT688_21900 PF18029 Glyoxalase-like domain FT688_21900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FT688_21905 PF07478 D-ala D-ala ligase C-terminus FT688_21905 PF01820 D-ala D-ala ligase N-terminus FT688_21920 PF00270 DEAD/DEAH box helicase FT688_21920 PF00271 Helicase conserved C-terminal domain FT688_21935 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FT688_21945 PF01928 CYTH domain FT688_21955 PF00583 Acetyltransferase (GNAT) family FT688_21965 PF03992 Antibiotic biosynthesis monooxygenase FT688_22070 PF04715 Anthranilate synthase component I, N terminal region FT688_22070 PF00425 chorismate binding enzyme FT688_22075 PF00293 NUDIX domain FT688_22085 PF00375 Sodium:dicarboxylate symporter family FT688_22090 PF09382 RQC domain FT688_22090 PF16124 RecQ zinc-binding FT688_22090 PF00570 HRDC domain FT688_22090 PF00271 Helicase conserved C-terminal domain FT688_22090 PF00270 DEAD/DEAH box helicase FT688_22095 PF06798 PrkA serine protein kinase C-terminal domain FT688_22095 PF08298 PrkA AAA domain FT688_22100 PF04285 Protein of unknown function (DUF444) FT688_22120 PF02600 Disulfide bond formation protein DsbB FT688_22125 PF09335 SNARE associated Golgi protein FT688_22150 PF06826 Predicted Permease Membrane Region FT688_22150 PF02080 TrkA-C domain FT688_22155 PF01464 Transglycosylase SLT domain FT688_22155 PF00497 Bacterial extracellular solute-binding proteins, family 3 FT688_22175 PF00072 Response regulator receiver domain FT688_22175 PF08279 HTH domain FT688_22175 PF12431 Transcriptional regulator FT688_22180 PF17203 Single cache domain 3 FT688_22180 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FT688_22180 PF00989 PAS fold FT688_22180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FT688_22230 PF13435 Cytochrome c554 and c-prime FT688_22230 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) FT688_22235 PF13247 4Fe-4S dicluster domain FT688_22235 PF00037 4Fe-4S binding domain FT688_22260 PF00293 NUDIX domain FT688_22280 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FT688_22285 PF01266 FAD dependent oxidoreductase FT688_22300 PF00571 CBS domain FT688_22300 PF00478 IMP dehydrogenase / GMP reductase domain FT688_22310 PF01717 Cobalamin-independent synthase, Catalytic domain FT688_22310 PF08267 Cobalamin-independent synthase, N-terminal domain FT688_22335 PF00106 short chain dehydrogenase FT688_22340 PF03466 LysR substrate binding domain FT688_22340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FT688_22345 PF13460 NAD(P)H-binding FT688_22355 PF01053 Cys/Met metabolism PLP-dependent enzyme FT688_22365 PF02774 Semialdehyde dehydrogenase, dimerisation domain FT688_22365 PF01118 Semialdehyde dehydrogenase, NAD binding domain FT688_22370 PF00893 Small Multidrug Resistance protein FT688_22375 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FT688_22375 PF18381 YcaO cyclodehydratase C-terminal domain FT688_22380 PF01226 Formate/nitrite transporter FT688_22385 PF02901 Pyruvate formate lyase-like FT688_22385 PF01228 Glycine radical