locus-tag	class	description
FT688_00035	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FT688_00040	COG2983	Belongs to the UPF0260 family
FT688_00050	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FT688_00055	COG0045	succinate-CoA ligase (ADP-forming) activity
FT688_00060	COG0508	dehydrogenase complex catalyzes the overall conversion of
FT688_00075	COG1053	succinate dehydrogenase
FT688_00100	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FT688_00145	COG0254	rRNA binding
FT688_00150	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FT688_00160	COG0583	DNA-binding transcription factor activity
FT688_00180	COG1879	ABC-type sugar transport system periplasmic component
FT688_00200	COG2925	Exonuclease
FT688_00215	COG1380	Effector of murein hydrolase LrgA
FT688_00220	COG1346	cytolysis
FT688_00225	COG0295	cytidine deaminase activity
FT688_00245	COG0861	Integral membrane protein TerC family
FT688_00250	COG2885	chlorophyll binding
FT688_00275	COG2154	pterin-4-alpha-carbinolamine dehydratase
FT688_00285	COG3768	UPF0283 membrane protein
FT688_00310	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FT688_00320	COG4168	peptide transport system, permease
FT688_00335	COG4172	Belongs to the ABC transporter superfamily
FT688_00345	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FT688_00350	COG1286	toxin biosynthetic process
FT688_00355	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FT688_00365	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FT688_00380	COG0686	Belongs to the AlaDH PNT family
FT688_00385	COG0492	ferredoxin-NADP+ reductase activity
FT688_00390	COG3706	GGDEF domain
FT688_00400	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
FT688_00410	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FT688_00420	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FT688_00425	COG1278	Cold shock
FT688_00430	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FT688_00460	COG3179	chitinase
FT688_00600	COG1435	thymidine kinase activity
FT688_00610	COG2916	Histone family protein nucleoid-structuring protein H-NS
FT688_00615	COG2096	Adenosyltransferase
FT688_00620	COG3530	Putative quorum-sensing-regulated virulence factor
FT688_00630	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
FT688_00660	COG0776	regulation of translation
FT688_00665	COG0539	negative regulation of cytoplasmic translation
FT688_00675	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FT688_00685	COG0583	DNA-binding transcription factor activity
FT688_00705	COG0778	Nitroreductase
FT688_00710	COG3300	MHYT domain
FT688_00710	COG5001	Diguanylate cyclase
FT688_00720	COG0583	DNA-binding transcription factor activity
FT688_00725	COG3437	response regulator, receiver
FT688_00755	COG0724	RNA recognition motif
FT688_00795	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FT688_00800	COG1360	Flagellar Motor Protein
FT688_00805	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FT688_00815	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FT688_00815	COG0649	NAD binding
FT688_00835	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
FT688_00845	COG0839	Belongs to the complex I subunit 6 family
FT688_00850	COG0713	ATP synthesis coupled electron transport
FT688_00865	COG1007	ATP synthesis coupled electron transport
FT688_00880	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FT688_00880	COG2199	diguanylate cyclase activity
FT688_00900	COG1645	bacterial-type flagellum-dependent swarming motility
FT688_00905	COG1160	GTP binding
FT688_00910	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FT688_00915	COG2976	Protein conserved in bacteria
FT688_00920	COG0124	histidyl-tRNA synthetase
FT688_00925	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
FT688_00940	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FT688_00945	COG0105	UTP biosynthetic process
FT688_00960	COG0633	Ferredoxin
FT688_00965	COG0443	Heat shock 70 kDa protein
FT688_00970	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FT688_00980	COG0822	iron-sulfur transferase activity
FT688_01010	COG0826	peptidase U32
FT688_01015	COG0826	peptidase U32
FT688_01030	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FT688_01040	COG1862	Preprotein translocase
FT688_01045	COG0343	queuine tRNA-ribosyltransferase activity
FT688_01050	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
FT688_01085	COG1393	Belongs to the ArsC family
FT688_01095	COG0640	Transcriptional regulator
FT688_01105	COG0509	glycine decarboxylation via glycine cleavage system
FT688_01110	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FT688_01115	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FT688_01120	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FT688_01145	COG0625	glutathione transferase activity
FT688_01175	COG0483	inositol monophosphate 1-phosphatase activity
FT688_01195	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FT688_01240	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FT688_01260	COG0301	tRNA thio-modification
FT688_01260	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FT688_01285	COG0628	permease
FT688_01290	COG1538	Outer membrane efflux protein
FT688_01320	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FT688_01365	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FT688_01385	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FT688_01425	COG2431	L-lysine efflux transmembrane transporter activity
FT688_01450	COG1393	Belongs to the ArsC family
FT688_01465	COG0425	Belongs to the sulfur carrier protein TusA family
FT688_01490	COG3842	ATPase activity
FT688_01515	COG3082	Protein of unknown function (DUF1414)
FT688_01550	COG4574	serine-type endopeptidase inhibitor activity
FT688_01555	COG3085	chromosome segregation
FT688_01560	COG0583	DNA-binding transcription factor activity
FT688_01565	COG1605	Chorismate mutase
FT688_01565	COG0287	Prephenate dehydrogenase
FT688_01570	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FT688_01585	COG1349	DNA-binding transcription factor activity
FT688_01595	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FT688_01600	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FT688_01605	COG0583	DNA-binding transcription factor activity
FT688_01625	COG0656	L-ascorbic acid biosynthetic process
FT688_01630	COG2814	Major facilitator Superfamily
FT688_01645	COG3220	belongs to the UPF0276 family
FT688_01755	COG0346	lactoylglutathione lyase activity
FT688_01765	COG1403	HNH endonuclease
FT688_01775	COG2964	Protein conserved in bacteria
FT688_01780	COG3681	Belongs to the UPF0597 family
FT688_01875	COG0840	transmembrane signaling receptor activity
FT688_01880	COG0302	gtp cyclohydrolase
FT688_01890	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FT688_01895	COG2267	carboxylic ester hydrolase activity
FT688_01900	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
FT688_01915	COG0314	molybdopterin synthase activity
FT688_01920	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
FT688_01930	COG0521	Mo-molybdopterin cofactor biosynthetic process
FT688_01935	COG3005	denitrification pathway
FT688_01945	COG0348	domain, Protein
FT688_01950	COG0437	4 iron, 4 sulfur cluster binding
FT688_01955	COG0243	molybdopterin cofactor binding
FT688_01970	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FT688_01975	COG3850	Histidine kinase
FT688_01980	COG2197	response regulator
FT688_02010	COG0121	glutamine amidotransferase
FT688_02015	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FT688_02020	COG1960	acyl-CoA dehydrogenase activity
FT688_02025	COG0784	Response regulator, receiver
FT688_02025	COG3437	response regulator, receiver
FT688_02045	COG2226	methyltransferase
FT688_02060	COG3021	interspecies interaction between organisms
FT688_02095	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FT688_02130	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FT688_02145	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FT688_02165	COG4136	ATPase activity
FT688_02170	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FT688_02175	COG2951	lytic endotransglycosylase activity
FT688_02190	COG1846	Transcriptional regulator
FT688_02200	COG0033	Phosphoglucomutase
FT688_02205	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
FT688_02210	COG0596	Alpha beta hydrolase
FT688_02225	COG0716	FMN binding
FT688_02235	COG0735	belongs to the Fur family
FT688_02240	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FT688_02250	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FT688_02250	COG1263	PTS System
FT688_02250	COG2190	(PTS) system
FT688_02255	COG0363	glucosamine-6-phosphate deaminase activity
FT688_02265	COG1940	carbohydrate kinase activity
FT688_02265	COG1846	Transcriptional regulator
FT688_02270	COG2194	sulfuric ester hydrolase activity
FT688_02275	COG0217	transcriptional regulatory protein
FT688_02280	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
FT688_02290	COG1801	Protein of unknown function DUF72
FT688_02295	COG4106	trans-aconitate 2-methyltransferase activity
FT688_02320	COG0450	alkyl hydroperoxide reductase
FT688_02335	COG0791	NLP P60 protein
FT688_02350	COG1309	transcriptional regulator
FT688_02415	COG1013	pyruvate-flavodoxin oxidoreductase activity
FT688_02415	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FT688_02415	COG0674	pyruvate-flavodoxin oxidoreductase activity
FT688_02415	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
FT688_02420	COG0493	'glutamate synthase
FT688_02445	COG1073	alpha beta
FT688_02445	COG2226	methyltransferase
FT688_02475	COG0017	Asparaginyl-tRNA synthetase
FT688_02495	COG3069	C4-dicarboxylate transmembrane transporter activity
FT688_02515	COG1393	Belongs to the ArsC family
FT688_02525	COG1876	peptidase activity
FT688_02555	COG1280	lysine exporter protein (LysE YggA)
FT688_02600	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FT688_02610	COG2914	Belongs to the UPF0125 (RnfH) family
FT688_02620	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
FT688_02810	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FT688_03075	COG0583	DNA-binding transcription factor activity
FT688_03080	COG2610	gluconate transmembrane transporter activity
FT688_03085	COG3048	D-serine ammonia-lyase activity
FT688_03095	COG0538	isocitrate dehydrogenase activity
FT688_03140	COG1263	PTS System
FT688_03140	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FT688_03145	COG1609	Transcriptional regulator
FT688_03155	COG0789	Transcriptional regulator
FT688_03175	COG0456	acetyltransferase
FT688_03185	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FT688_03185	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FT688_03185	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FT688_03195	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FT688_03195	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FT688_03195	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FT688_03220	COG2915	High frequency lysogenization protein hflD homolog
FT688_03225	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FT688_03230	COG2850	peptidyl-arginine hydroxylation
FT688_03235	COG3153	acetyltransferase
FT688_03245	COG0625	glutathione transferase activity
FT688_03250	COG0259	pyridoxamine-phosphate oxidase activity
FT688_03265	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FT688_03265	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FT688_03270	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FT688_03285	COG4235	cytochrome complex assembly
FT688_03285	COG3088	subunit of a heme lyase
FT688_03290	COG3088	subunit of a heme lyase
FT688_03290	COG4235	cytochrome complex assembly
FT688_03295	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FT688_03300	COG1138	Cytochrome C-type biogenesis protein
FT688_03305	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
FT688_03310	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FT688_03315	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FT688_03335	COG0835	chemotaxis
FT688_03345	COG1192	Involved in chromosome partitioning
FT688_03350	COG1360	Flagellar Motor Protein
FT688_03355	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FT688_03360	COG2201	protein-glutamate methylesterase activity
FT688_03370	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FT688_03460	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FT688_03470	COG1677	Flagellar hook-basal body complex protein FliE
FT688_03495	COG2994	toxin metabolic process
FT688_03535	COG1737	Transcriptional regulator
FT688_03540	COG0469	pyruvate kinase activity
FT688_03580	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FT688_03585	COG0583	DNA-binding transcription factor activity
FT688_03630	COG1454	alcohol dehydrogenase
FT688_03630	COG1012	belongs to the aldehyde dehydrogenase family
FT688_03635	COG1882	Formate acetyltransferase
FT688_03640	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FT688_03650	COG4869	propanediol catabolic process
FT688_03695	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
FT688_03700	COG0791	NLP P60 protein
FT688_03710	COG3118	belongs to the thioredoxin family
FT688_03720	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FT688_03735	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FT688_03755	COG0366	Alpha amylase catalytic
FT688_03760	COG0741	lytic transglycosylase activity
FT688_03760	COG0739	heme binding
FT688_03760	COG1196	nuclear chromosome segregation
FT688_03770	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
FT688_03780	COG0673	inositol 2-dehydrogenase activity
FT688_03805	COG3152	Membrane
FT688_03825	COG1032	radical SAM domain protein
FT688_03850	COG1752	Esterase of the alpha-beta hydrolase superfamily
FT688_03885	COG0281	malic enzyme
FT688_03895	COG0534	Mate efflux family protein
FT688_03920	COG1115	amino acid carrier protein
FT688_03925	COG0019	diaminopimelate decarboxylase activity
FT688_03945	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
FT688_03965	COG1131	(ABC) transporter
FT688_03970	COG0545	Peptidyl-prolyl cis-trans isomerase
FT688_03975	COG3142	Participates in the control of copper homeostasis
FT688_04000	COG5002	protein histidine kinase activity
FT688_04005	COG0745	RESPONSE REGULATOR receiver
FT688_04010	COG0346	lactoylglutathione lyase activity
FT688_04050	COG3290	protein histidine kinase activity
FT688_04075	COG1566	PFAM secretion protein HlyD family protein
FT688_04105	COG0602	queuosine metabolic process
FT688_04150	COG3108	Peptidase M15
FT688_04155	COG2989	Protein conserved in bacteria
FT688_04170	COG0463	Glycosyl transferase, family 2
FT688_04185	COG0366	Alpha amylase catalytic
FT688_04220	COG3706	GGDEF domain
FT688_04250	COG0531	amino acid
FT688_04260	COG1234	tRNA 3'-trailer cleavage
FT688_04265	COG0814	amino acid
FT688_04280	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
FT688_04285	COG1982	Orn Lys Arg decarboxylase major
FT688_04290	COG0531	amino acid
FT688_04295	COG3710	Transcriptional regulator
FT688_04300	COG0825	malonyl-CoA metabolic process
FT688_04310	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FT688_04315	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FT688_04325	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FT688_04330	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FT688_04345	COG0750	zinc metalloprotease
FT688_04350	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FT688_04360	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FT688_04365	COG0233	cytoplasmic translational termination
FT688_04370	COG0528	UMP kinase activity
FT688_04375	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FT688_04380	COG0052	Belongs to the universal ribosomal protein uS2 family
FT688_04385	COG0024	Methionine aminopeptidase
FT688_04390	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
FT688_04395	COG2171	N-acyltransferase activity
FT688_04415	COG4580	involved in the transport of maltose and maltodextrins
FT688_04430	COG3098	single-species biofilm formation
FT688_04455	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
FT688_04465	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FT688_04465	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FT688_04480	COG1611	Belongs to the LOG family
FT688_04485	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FT688_04500	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
FT688_04505	COG2363	Small membrane protein
FT688_04515	COG0583	DNA-binding transcription factor activity
FT688_04520	COG0840	transmembrane signaling receptor activity
FT688_04525	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FT688_04540	COG1477	protein flavinylation
FT688_04545	COG2871	sodium ion transport
FT688_04550	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FT688_04555	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FT688_04560	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FT688_04565	COG1805	sodium ion transport
FT688_04580	COG2813	Specifically methylates the guanine in position
FT688_04610	COG1666	GTP binding
FT688_04615	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FT688_04675	COG2771	luxR family
FT688_04695	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FT688_04695	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FT688_04715	COG0783	Belongs to the Dps family
FT688_04740	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FT688_04755	COG4221	oxidoreductase activity
FT688_04765	COG0415	Belongs to the DNA photolyase family
FT688_04770	COG0789	Transcriptional regulator
FT688_04775	COG3272	Protein of unknown function (DUF1722)
FT688_04805	COG0077	Prephenate dehydratase
FT688_04805	COG1605	Chorismate mutase
FT688_04915	COG0826	peptidase U32
FT688_04930	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FT688_04935	COG0840	transmembrane signaling receptor activity
FT688_04960	COG0835	chemotaxis
FT688_04975	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
FT688_04985	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FT688_05015	COG2197	response regulator
FT688_05040	COG2200	EAL domain
FT688_05040	COG2203	Gaf domain
FT688_05040	COG2199	diguanylate cyclase activity
FT688_05060	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FT688_05070	COG0305	Participates in initiation and elongation during chromosome replication
FT688_05110	COG2204	response regulator
FT688_05115	COG0545	Peptidyl-prolyl cis-trans isomerase
FT688_05130	COG1047	Peptidyl-prolyl cis-trans
FT688_05135	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
FT688_05145	COG0784	Response regulator, receiver
FT688_05145	COG0835	chemotaxis
FT688_05160	COG3089	Belongs to the UPF0270 family
FT688_05170	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FT688_05195	COG2076	Multidrug Resistance protein
FT688_05200	COG2076	Multidrug Resistance protein
FT688_05260	COG3655	Transcriptional regulator
FT688_05275	COG4771	TonB-dependent receptor
FT688_05295	COG0748	coenzyme F420 binding
FT688_05400	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FT688_05410	COG3178	'Phosphotransferase
FT688_05415	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FT688_05425	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FT688_05430	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FT688_05435	COG2967	ApaG domain
FT688_05440	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FT688_05450	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FT688_05455	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FT688_05480	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FT688_05485	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FT688_05490	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FT688_05495	COG0142	geranyltranstransferase activity
FT688_05505	COG0330	HflC and HflK could
FT688_05510	COG0330	HflC and HflK could
FT688_05520	COG1923	regulation of RNA biosynthetic process
FT688_05565	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FT688_05570	COG2011	ABC-type metal ion transport system permease component
FT688_05575	COG1464	Belongs to the NlpA lipoprotein family
FT688_05585	COG0840	transmembrane signaling receptor activity
FT688_05630	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
FT688_05660	COG2716	regulation of RNA biosynthetic process
FT688_05665	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FT688_05670	COG3013	Belongs to the UPF0304 family
FT688_05680	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FT688_05685	COG0857	belongs to the CobB CobQ family
FT688_05685	COG0280	phosphate acetyltransferase
FT688_05695	COG0028	Belongs to the TPP enzyme family
FT688_05710	COG0671	phosphoesterase, PA-phosphatase related
FT688_05725	COG0473	3-isopropylmalate dehydrogenase activity
FT688_05750	COG4143	(ABC) transporter
FT688_05760	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
FT688_05810	COG0564	pseudouridine synthase activity
FT688_05820	COG5001	Diguanylate cyclase
FT688_05820	COG3300	MHYT domain
FT688_05830	COG0459	protein refolding
FT688_05835	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FT688_05840	COG0534	Mate efflux family protein
FT688_05845	COG3030	protein affecting phage T7 exclusion by the F plasmid
FT688_05850	COG1027	Aspartate ammonia-lyase
FT688_05855	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FT688_05880	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FT688_05885	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FT688_05905	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FT688_05915	COG3036	rescue of stalled ribosome
FT688_05930	COG0138	bifunctional purine biosynthesis protein purh
FT688_05960	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FT688_05970	COG1610	YqeY-like protein
FT688_05975	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FT688_05980	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FT688_06005	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
FT688_06010	COG0585	pseudouridine synthase activity
FT688_06030	COG0148	phosphopyruvate hydratase activity
FT688_06085	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FT688_06095	COG3716	PTS system mannose fructose sorbose family IID component
FT688_06120	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FT688_06125	COG1381	Involved in DNA repair and RecF pathway recombination
FT688_06135	COG0571	ribonuclease III activity
FT688_06140	COG0681	Belongs to the peptidase S26 family
FT688_06160	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
FT688_06165	COG1595	DNA-templated transcription, initiation
FT688_06170	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FT688_06180	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FT688_06185	COG0354	folic acid binding
FT688_06220	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FT688_06230	COG0126	phosphoglycerate kinase activity
FT688_06260	COG4991	sh3 domain protein
FT688_06285	COG1028	Short-chain dehydrogenase reductase Sdr
FT688_06300	COG1505	serine-type exopeptidase activity
FT688_06320	COG1126	abc transporter atp-binding protein
FT688_06325	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FT688_06335	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FT688_06340	COG0745	RESPONSE REGULATOR receiver
FT688_06390	COG2070	2-Nitropropane dioxygenase
FT688_06420	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
FT688_06440	COG3706	GGDEF domain
FT688_06465	COG0154	amidase activity
FT688_06470	COG2957	Belongs to the agmatine deiminase family
FT688_06485	COG1902	pentaerythritol trinitrate reductase activity
FT688_06525	COG5001	Diguanylate cyclase
FT688_06525	COG3300	MHYT domain
FT688_06535	COG0714	Associated with various cellular activities
FT688_06545	COG0456	acetyltransferase
FT688_06555	COG1022	Amp-dependent synthetase and ligase
FT688_06605	COG0359	binds to the 23S rRNA
FT688_06610	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FT688_06615	COG0360	Binds together with S18 to 16S ribosomal RNA
FT688_06655	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FT688_06670	COG1854	S-ribosylhomocysteine lyase activity
FT688_06740	COG4970	Tfp pilus assembly protein FimT
FT688_06750	COG1047	Peptidyl-prolyl cis-trans
FT688_06765	COG0196	riboflavin kinase activity
FT688_06775	COG0268	Binds directly to 16S ribosomal RNA
FT688_06780	COG0640	Transcriptional regulator
FT688_06785	COG0583	DNA-binding transcription factor activity
FT688_06800	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
FT688_06815	COG1051	belongs to the nudix hydrolase family
FT688_06830	COG0335	large ribosomal subunit rRNA binding
FT688_06835	COG0336	Belongs to the RNA methyltransferase TrmD family
FT688_06840	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FT688_06845	COG0228	four-way junction DNA binding
FT688_06850	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FT688_06855	COG4137	Cytochrome C assembly protein
FT688_06870	COG1017	nitric oxide dioxygenase activity
FT688_06870	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FT688_06880	COG0039	L-malate dehydrogenase activity
FT688_06885	COG4160	amino acid transport
FT688_06890	COG4215	(ABC) transporter
FT688_06895	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FT688_06900	COG1126	abc transporter atp-binding protein
FT688_06905	COG1438	arginine binding
FT688_06910	COG2837	iron assimilation
FT688_06915	COG3842	ATPase activity
FT688_06945	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FT688_06950	COG0583	DNA-binding transcription factor activity
FT688_06965	COG1929	Belongs to the glycerate kinase type-1 family
FT688_06970	COG2610	gluconate transmembrane transporter activity
FT688_06975	COG3835	regulator
FT688_06980	COG3112	Uncharacterised protein family (UPF0231)
FT688_06995	COG0840	transmembrane signaling receptor activity
FT688_07145	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FT688_07175	COG0110	maltose O-acetyltransferase activity
FT688_07200	COG0165	Argininosuccinate lyase
FT688_07205	COG0137	argininosuccinate synthase activity
FT688_07215	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FT688_07220	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FT688_07230	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
FT688_07265	COG0814	amino acid
FT688_07275	COG0494	nUDIX hydrolase
FT688_07280	COG1011	Hydrolase
FT688_07285	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FT688_07300	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FT688_07320	COG2165	general secretion pathway protein
FT688_07335	COG2165	general secretion pathway protein
FT688_07355	COG3031	protein transport across the cell outer membrane
FT688_07365	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
FT688_07370	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
FT688_07395	COG3133	Outer membrane lipoprotein
FT688_07400	COG0737	Belongs to the 5'-nucleotidase family
FT688_07410	COG2771	luxR family
FT688_07415	COG3916	Acyl-homoserine-lactone synthase
FT688_07430	COG1309	transcriptional regulator
FT688_07440	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FT688_07440	COG2213	PTS system mannitol-specific
FT688_07445	COG0246	Mannitol dehydrogenase
FT688_07450	COG3722	fumarate hydratase activity
FT688_07495	COG1988	membrane-bound metal-dependent
FT688_07500	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FT688_07505	COG0513	Belongs to the DEAD box helicase family
FT688_07540	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
FT688_07550	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FT688_07560	COG0318	PFAM AMP-dependent synthetase and ligase
FT688_07580	COG3121	Chaperone
FT688_07595	COG3539	Fimbrial protein
FT688_07610	COG2949	membrane
FT688_07660	COG2873	o-acetylhomoserine
FT688_07690	COG4221	oxidoreductase activity
FT688_07730	COG1368	sulfuric ester hydrolase activity
FT688_07735	COG1522	sequence-specific DNA binding
FT688_07745	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
FT688_07750	COG1418	mRNA catabolic process
FT688_07755	COG1546	Belongs to the CinA family
FT688_07755	COG1058	Belongs to the CinA family
FT688_07785	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FT688_07805	COG1011	Hydrolase
FT688_07820	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
FT688_07825	COG0019	diaminopimelate decarboxylase activity
FT688_07835	COG1965	Belongs to the frataxin family
FT688_07850	COG0181	hydroxymethylbilane synthase activity
FT688_07935	COG3932	Exopolysaccharide synthesis, ExoD
FT688_07945	COG3706	GGDEF domain
FT688_07960	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
FT688_07980	COG2022	thiamine diphosphate biosynthetic process
FT688_07990	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FT688_08000	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
FT688_08035	COG0189	ligase activity
FT688_08075	COG3700	Belongs to the class B bacterial acid phosphatase family
FT688_08095	COG1366	Belongs to the anti-sigma-factor antagonist family
FT688_08140	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
FT688_08170	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FT688_08180	COG3164	Protein of unknown function
FT688_08195	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
FT688_08205	COG1077	Cell shape determining protein MreB Mrl
FT688_08240	COG2165	general secretion pathway protein
FT688_08305	COG2200	EAL domain
FT688_08310	COG0387	Pfam Sodium calcium exchanger
FT688_08315	COG2986	histidine ammonia-lyase
FT688_08320	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FT688_08330	COG1228	amidohydrolase
FT688_08335	COG2188	Transcriptional regulator
FT688_08340	COG0288	reversible hydration of carbon dioxide
FT688_08350	COG2177	Part of the ABC transporter FtsEX involved in
FT688_08355	COG2884	Cell division ATP-binding protein ftsE
FT688_08360	COG0552	protein localization to endoplasmic reticulum
FT688_08405	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FT688_08415	COG2095	MarC family integral membrane protein
FT688_08425	COG1301	dicarboxylic acid transport
FT688_08450	COG3714	YhhN family
FT688_08490	COG4221	oxidoreductase activity
FT688_08495	COG0583	DNA-binding transcription factor activity
FT688_08500	COG2249	NAD(P)H dehydrogenase (quinone) activity
FT688_08555	COG0203	ribosomal protein L17
FT688_08560	COG0202	RNA polymerase activity
FT688_08565	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
FT688_08570	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FT688_08575	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FT688_08580	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FT688_08585	COG0201	protein transport
FT688_08590	COG0200	Binds to the 23S rRNA
FT688_08595	COG1841	ribosomal large subunit assembly
FT688_08600	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
FT688_08610	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FT688_08615	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FT688_08620	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FT688_08625	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FT688_08630	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FT688_08635	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FT688_08640	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FT688_08645	COG0255	Belongs to the universal ribosomal protein uL29 family
FT688_08655	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FT688_08675	COG0089	rRNA binding
FT688_08680	COG0088	Forms part of the polypeptide exit tunnel
FT688_08685	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FT688_08690	COG0051	transcription antitermination factor activity, RNA binding
FT688_08745	COG1040	competence protein
FT688_08750	COG0316	Belongs to the HesB IscA family
FT688_08750	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
FT688_08760	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FT688_08765	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FT688_08770	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
FT688_08775	COG4942	peptidase
FT688_08790	COG0800	Aldolase
FT688_08795	COG0129	dihydroxy-acid dehydratase activity
FT688_08800	COG3265	gluconokinase activity
FT688_08805	COG2610	gluconate transmembrane transporter activity
FT688_08825	COG0456	acetyltransferase
FT688_08835	COG1490	D-aminoacyl-tRNA deacylase activity
FT688_08845	COG1217	gtp-binding protein TYPA
FT688_08850	COG0174	glutamine synthetase
FT688_08870	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FT688_08885	COG3078	GTPase activator activity
FT688_08900	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FT688_08915	COG0408	coproporphyrinogen oxidase activity
FT688_08930	COG0551	DNA topoisomerase type I activity
FT688_08935	COG2922	Belongs to the Smg family
FT688_08940	COG0758	DNA mediated transformation
FT688_08950	COG0242	peptide deformylase activity
FT688_08955	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FT688_08960	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FT688_08960	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FT688_08970	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FT688_08995	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FT688_09000	COG0686	Belongs to the AlaDH PNT family
FT688_09005	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FT688_09005	COG0519	Catalyzes the synthesis of GMP from XMP
FT688_09020	COG1396	sequence-specific DNA binding
FT688_09030	COG2962	Rard protein
FT688_09055	COG1280	lysine exporter protein (LysE YggA)
FT688_09130	COG0210	DNA helicase
FT688_09135	COG1744	ABC transporter substrate-binding protein PnrA-like
FT688_09140	COG3845	ABC transporter
FT688_09150	COG1079	Belongs to the binding-protein-dependent transport system permease family
FT688_09160	COG0583	DNA-binding transcription factor activity
FT688_09190	COG0531	amino acid
FT688_09195	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FT688_09200	COG0531	amino acid
FT688_09210	COG3250	beta-galactosidase activity
FT688_09215	COG1609	Transcriptional regulator
FT688_09250	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FT688_09265	COG3074	FtsZ-dependent cytokinesis
FT688_09275	COG1045	serine acetyltransferase
FT688_09285	COG0745	RESPONSE REGULATOR receiver
FT688_09295	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FT688_09325	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FT688_09330	COG2937	Belongs to the GPAT DAPAT family
FT688_09335	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
FT688_09340	COG3161	chorismate lyase activity
FT688_09400	COG0463	Glycosyl transferase, family 2
FT688_09405	COG0859	PFAM glycosyl transferase family 9
FT688_09410	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FT688_09415	COG2990	Protein conserved in bacteria
FT688_09420	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FT688_09430	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FT688_09435	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FT688_09440	COG2003	Belongs to the UPF0758 family
FT688_09450	COG0756	dUTP diphosphatase activity
FT688_09455	COG1309	transcriptional regulator
FT688_09460	COG0668	transmembrane transport
FT688_09475	COG0166	Belongs to the GPI family
FT688_09480	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FT688_09485	COG0583	DNA-binding transcription factor activity
FT688_09535	COG1739	Uncharacterized protein family UPF0029
FT688_09550	COG1250	3-hydroxyacyl-CoA dehydrogenase
FT688_09550	COG1024	Enoyl-CoA hydratase
FT688_09580	COG0425	Belongs to the sulfur carrier protein TusA family
FT688_09585	COG0251	oxidation-reduction process
FT688_09595	COG2885	chlorophyll binding
FT688_09605	COG2818	Glycosylase
FT688_09610	COG0752	glycyl-tRNA synthetase alpha subunit
FT688_09615	COG0751	glycine-tRNA ligase activity
FT688_09630	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FT688_09680	COG2188	Transcriptional regulator
FT688_09735	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FT688_09775	COG3118	belongs to the thioredoxin family
FT688_09780	COG0513	Belongs to the DEAD box helicase family
FT688_09785	COG0248	Ppx GppA phosphatase
FT688_09800	COG0742	ribosomal rna small subunit methyltransferase
FT688_09820	COG0084	hydrolase, TatD family'
FT688_09825	COG0805	protein transport
FT688_09830	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FT688_09845	COG3165	ubiquinone biosynthetic process from chorismate
FT688_09860	COG0402	S-adenosylhomocysteine deaminase activity
FT688_09910	COG0848	biopolymer transport protein
FT688_09915	COG0811	peptide transport
FT688_09930	COG2771	luxR family
FT688_09935	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FT688_09940	COG1349	DNA-binding transcription factor activity
FT688_09945	COG0745	RESPONSE REGULATOR receiver
FT688_09965	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FT688_09970	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FT688_09975	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FT688_09985	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FT688_09990	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FT688_09995	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FT688_10005	COG0356	it plays a direct role in the translocation of protons across the membrane
FT688_10025	COG0357	Ribosomal RNA small subunit methyltransferase G
FT688_10035	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FT688_10045	COG4615	Cyclic peptide transporter
FT688_10050	COG1120	ATPase activity
FT688_10070	COG0706	membrane insertase activity
FT688_10075	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
FT688_10080	COG0594	ribonuclease P activity
FT688_10085	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FT688_10090	COG1126	abc transporter atp-binding protein
FT688_10105	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FT688_10110	COG0592	DNA-directed DNA polymerase activity
FT688_10130	COG2378	regulation of single-species biofilm formation
FT688_10135	COG0071	Belongs to the small heat shock protein (HSP20) family
FT688_10140	COG0071	Belongs to the small heat shock protein (HSP20) family
FT688_10145	COG3977	Valine--pyruvate aminotransferase
FT688_10165	COG0745	RESPONSE REGULATOR receiver
FT688_10195	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FT688_10210	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FT688_10215	COG1309	transcriptional regulator
FT688_10250	COG2271	Major facilitator Superfamily
FT688_10295	COG1758	RNA polymerase activity
FT688_10305	COG0859	PFAM glycosyl transferase family 9
FT688_10310	COG3642	lipopolysaccharide core region biosynthetic process
FT688_10350	COG0589	response to stress
FT688_10365	COG1528	Iron-storage protein
FT688_10370	COG2081	HI0933 family
FT688_10375	COG2223	nitrite transmembrane transporter activity
FT688_10415	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FT688_10415	COG2205	protein histidine kinase activity
FT688_10425	COG3275	phosphorelay sensor kinase activity
FT688_10430	COG3279	Response regulator of the LytR AlgR family
FT688_10435	COG2223	nitrite transmembrane transporter activity
FT688_10440	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FT688_10445	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FT688_10465	COG4206	TonB-dependent receptor
FT688_10470	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FT688_10505	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FT688_10510	COG2166	iron-sulfur cluster assembly
FT688_10515	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FT688_10520	COG0210	DNA helicase
FT688_10530	COG3245	cytochrome
FT688_10540	COG0156	8-amino-7-oxononanoate synthase activity
FT688_10550	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FT688_10565	COG3306	glycosyltransferase involved in LPS biosynthesis
FT688_10590	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
FT688_10595	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FT688_10605	COG0789	Transcriptional regulator
FT688_10615	COG3084	Protein conserved in bacteria
FT688_10625	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FT688_10630	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FT688_10640	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FT688_10655	COG1335	isochorismatase
FT688_10670	COG1683	Conserved Protein
FT688_10675	COG0204	Acyl-transferase
FT688_10680	COG0204	Acyl-transferase
FT688_10700	COG3978	acetolactate synthase activity
FT688_10745	COG0254	rRNA binding
FT688_10765	COG2205	protein histidine kinase activity
FT688_10830	COG2089	acid synthase
FT688_10860	COG0318	PFAM AMP-dependent synthetase and ligase
FT688_10875	COG1215	transferase activity, transferring glycosyl groups
FT688_10880	COG0562	UDP-galactopyranose mutase
FT688_10915	COG2226	methyltransferase
FT688_10930	COG2192	nodulation
FT688_10940	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FT688_10945	COG1086	Polysaccharide biosynthesis protein
FT688_10950	COG0366	Alpha amylase catalytic
FT688_10965	COG0443	Heat shock 70 kDa protein
FT688_10970	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FT688_10975	COG3045	CreA protein
FT688_11015	COG3842	ATPase activity
FT688_11020	COG1176	ABC-type spermidine putrescine transport system, permease component I
FT688_11025	COG1177	transmembrane transport
FT688_11030	COG2258	MOSC domain
FT688_11045	COG2050	protein possibly involved in aromatic compounds catabolism
FT688_11060	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FT688_11070	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FT688_11075	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FT688_11085	COG2239	Acts as a magnesium transporter
FT688_11090	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FT688_11090	COG1648	precorrin-2 dehydrogenase activity
FT688_11095	COG2116	formate transmembrane transporter activity
FT688_11105	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FT688_11120	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
FT688_11125	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
FT688_11150	COG1595	DNA-templated transcription, initiation
FT688_11170	COG2017	converts alpha-aldose to the beta-anomer
FT688_11190	COG1609	Transcriptional regulator
FT688_11215	COG0840	transmembrane signaling receptor activity
FT688_11245	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FT688_11250	COG1288	antiporter activity
FT688_11260	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
FT688_11265	COG0540	Belongs to the ATCase OTCase family
FT688_11300	COG0583	DNA-binding transcription factor activity
FT688_11315	COG2207	Transcriptional regulator
FT688_11320	COG1979	alcohol dehydrogenase
FT688_11325	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FT688_11330	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FT688_11350	COG0446	pyridine nucleotide-disulphide oxidoreductase
FT688_11355	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FT688_11360	COG0564	pseudouridine synthase activity
FT688_11370	COG0542	response to heat
FT688_11375	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
FT688_11385	COG2502	aspartate--ammonia ligase
FT688_11400	COG5413	integral membrane protein
FT688_11425	COG2205	protein histidine kinase activity
FT688_11455	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
FT688_11490	COG3005	denitrification pathway
FT688_11520	COG0569	domain protein
FT688_11525	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FT688_11550	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FT688_11565	COG0250	Participates in transcription elongation, termination and antitermination
FT688_11570	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FT688_11575	COG0081	regulation of translation
FT688_11580	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FT688_11585	COG0222	ribosome binding
FT688_11590	COG0085	RNA polymerase activity
FT688_11595	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FT688_11600	COG2964	Protein conserved in bacteria
FT688_11605	COG0251	oxidation-reduction process
FT688_11615	COG2923	Belongs to the DsrF TusC family
FT688_11620	COG2168	tRNA wobble position uridine thiolation
FT688_11625	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
FT688_11630	COG0049	tRNA binding
FT688_11635	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FT688_11640	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FT688_11645	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FT688_11685	COG2252	PERMEase
FT688_11690	COG2376	Dihydroxyacetone kinase
FT688_11695	COG1461	Dihydroxyacetone kinase
FT688_11730	COG3613	nucleoside 2-deoxyribosyltransferase
FT688_11770	COG1247	-acetyltransferase
FT688_11810	COG1175	transmembrane transport
FT688_11835	COG0583	DNA-binding transcription factor activity
FT688_11845	COG1741	Belongs to the pirin family
FT688_11850	COG2259	Doxx family
FT688_11855	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
FT688_11865	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FT688_11930	COG1278	Cold shock
FT688_11955	COG0629	single-stranded DNA binding
FT688_11965	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FT688_11975	COG3047	cAMP biosynthetic process
FT688_11980	COG0840	transmembrane signaling receptor activity
FT688_12005	COG3135	benzoate transporter
FT688_12040	COG2926	Belongs to the UPF0265 family
FT688_12050	COG3028	Belongs to the UPF0307 family
FT688_12060	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FT688_12065	COG5007	Belongs to the BolA IbaG family
FT688_12075	COG2854	intermembrane phospholipid transfer
FT688_12080	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FT688_12085	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FT688_12090	COG1127	ABC transporter
FT688_12095	COG0517	IMP dehydrogenase activity
FT688_12095	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FT688_12105	COG3117	lipopolysaccharide transmembrane transporter activity
FT688_12110	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FT688_12115	COG1137	ATPase activity
FT688_12130	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FT688_12140	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FT688_12190	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FT688_12195	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FT688_12210	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FT688_12215	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FT688_12220	COG0723	plastoquinol--plastocyanin reductase activity
FT688_12225	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FT688_12235	COG0625	glutathione transferase activity
FT688_12240	COG2969	positive regulation of protein catabolic process
FT688_12245	COG2823	Periplasmic or secreted lipoprotein
FT688_12250	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FT688_12255	COG0792	nuclease activity
FT688_12260	COG3107	peptidoglycan biosynthetic process
FT688_12265	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FT688_12275	COG2001	Belongs to the MraZ family
FT688_12285	COG3116	cell division
FT688_12290	COG0768	penicillin binding
FT688_12300	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FT688_12315	COG0772	Belongs to the SEDS family
FT688_12320	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FT688_12325	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FT688_12345	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
FT688_12355	COG0653	protein targeting
FT688_12365	COG0494	nUDIX hydrolase
FT688_12370	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
FT688_12375	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
FT688_12390	COG1459	type II secretion system
FT688_12395	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FT688_12425	COG2186	Transcriptional regulator
FT688_12430	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FT688_12435	COG0508	dehydrogenase complex catalyzes the overall conversion of
FT688_12440	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FT688_12465	COG1049	propionate catabolic process, 2-methylcitrate cycle
FT688_12480	COG1280	lysine exporter protein (LysE YggA)
FT688_12510	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FT688_12560	COG0784	Response regulator, receiver
FT688_12560	COG0835	chemotaxis
FT688_12570	COG1444	tRNA N-acetyltransferase activity
FT688_12630	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FT688_12630	COG1263	PTS System
FT688_12680	COG1757	Na H antiporter
FT688_12725	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FT688_12730	COG2813	Specifically methylates the guanine in position
FT688_12735	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FT688_12740	COG3706	GGDEF domain
FT688_12740	COG4251	negative regulation of phosphorylation
FT688_12740	COG2203	Gaf domain
FT688_12740	COG5001	Diguanylate cyclase
FT688_12750	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FT688_12760	COG2995	paraquat-inducible protein a
FT688_12765	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FT688_12765	COG3008	intermembrane lipid transfer
FT688_12770	COG3009	Protein conserved in bacteria
FT688_12790	COG3111	PFAM Bacterial OB fold (BOF) protein
FT688_12800	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
FT688_12815	COG3409	Peptidoglycan-binding domain 1 protein
FT688_12815	COG3267	Type II secretory pathway component ExeA
FT688_12840	COG1380	Effector of murein hydrolase LrgA
FT688_12880	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FT688_12885	COG0306	phosphate transporter
FT688_12890	COG1392	Phosphate transport regulator
FT688_12905	COG1560	Kdo2-lipid A biosynthetic process
FT688_12910	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
FT688_12910	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FT688_12935	COG3150	esterase
FT688_12980	COG0583	DNA-binding transcription factor activity
FT688_13045	COG0204	Acyl-transferase
FT688_13050	COG1842	Phage shock protein A
FT688_13065	COG2827	Endonuclease containing a URI domain
FT688_13075	COG2962	Rard protein
FT688_13080	COG1573	uracil-dna glycosylase
FT688_13085	COG0697	spore germination
FT688_13095	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FT688_13100	COG1121	(ABC) transporter
FT688_13105	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
FT688_13135	COG3068	Protein conserved in bacteria
FT688_13160	COG1546	Belongs to the CinA family
FT688_13165	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FT688_13175	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FT688_13180	COG0527	aspartate kinase activity
FT688_13185	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
FT688_13220	COG1686	Belongs to the peptidase S11 family
FT688_13225	COG0586	Pfam SNARE associated Golgi protein
FT688_13230	COG1253	flavin adenine dinucleotide binding
FT688_13235	COG0525	valine-tRNA ligase activity
FT688_13240	COG2927	DNA polymerase III (CHI subunit)
FT688_13245	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FT688_13250	COG0795	lipopolysaccharide-transporting ATPase activity
FT688_13255	COG0795	lipopolysaccharide-transporting ATPase activity
FT688_13275	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FT688_13310	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FT688_13315	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
FT688_13320	COG0813	purine-nucleoside phosphorylase activity
FT688_13325	COG5002	protein histidine kinase activity
FT688_13325	COG5001	Diguanylate cyclase
FT688_13325	COG3447	MASE1 domain protein
FT688_13335	COG0560	Phosphoserine phosphatase
FT688_13360	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
FT688_13370	COG0776	regulation of translation
FT688_13385	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FT688_13390	COG0735	belongs to the Fur family
FT688_13420	COG0513	Belongs to the DEAD box helicase family
FT688_13425	COG3022	response to hydroperoxide
FT688_13440	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FT688_13450	COG0762	integral membrane protein
FT688_13490	COG1024	Enoyl-CoA hydratase
FT688_13505	COG4221	oxidoreductase activity
FT688_13510	COG0442	prolyl-tRNA aminoacylation
FT688_13515	COG0840	transmembrane signaling receptor activity
FT688_13520	COG0632	four-way junction helicase activity
FT688_13525	COG2255	four-way junction helicase activity
FT688_13530	COG1271	oxidase subunit
FT688_13535	COG1294	oxidase, subunit
FT688_13540	COG4890	Cyd operon protein YbgT
FT688_13545	COG3790	cyd operon protein YbgE
FT688_13555	COG0811	peptide transport
FT688_13575	COG2885	chlorophyll binding
FT688_13660	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
FT688_13665	COG0676	glucose-6-phosphate 1-epimerase activity
FT688_13670	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FT688_13700	COG1051	belongs to the nudix hydrolase family
FT688_13710	COG1764	response to oxidative stress
FT688_13715	COG1846	Transcriptional regulator
FT688_13750	COG0561	phosphatase activity
FT688_13800	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FT688_13830	COG2731	YhcH YjgK YiaL family protein
FT688_13840	COG0668	transmembrane transport
FT688_13850	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FT688_13890	COG0583	DNA-binding transcription factor activity
FT688_13905	COG0488	(ABC) transporter
FT688_13915	COG1585	Membrane protein implicated in regulation of membrane protease activity
FT688_13920	COG0330	HflC and HflK could
FT688_13935	COG2895	sulfate adenylyltransferase (ATP) activity
FT688_13960	COG0840	transmembrane signaling receptor activity
FT688_13980	COG1136	(ABC) transporter
FT688_13995	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FT688_14015	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FT688_14025	COG0163	prenyltransferase activity
FT688_14040	COG1131	(ABC) transporter
FT688_14045	COG0842	Transport permease protein
FT688_14050	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
FT688_14075	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FT688_14095	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FT688_14100	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FT688_14105	COG1489	DNA binding
FT688_14125	COG0346	lactoylglutathione lyase activity
FT688_14135	COG2076	Multidrug Resistance protein
FT688_14145	COG3437	response regulator, receiver
FT688_14145	COG0784	Response regulator, receiver
FT688_14155	COG0671	phosphoesterase, PA-phosphatase related
FT688_14170	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FT688_14175	COG0038	chloride channel
FT688_14185	COG0316	Belongs to the HesB IscA family
FT688_14210	COG1280	lysine exporter protein (LysE YggA)
FT688_14215	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
FT688_14230	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FT688_14260	COG0745	RESPONSE REGULATOR receiver
FT688_14265	COG3104	oligopeptide transport
FT688_14270	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FT688_14275	COG1555	photosystem II stabilization
FT688_14285	COG2350	Protein conserved in bacteria
FT688_14290	COG2917	probably involved in intracellular septation
FT688_14295	COG0076	glutamate decarboxylase activity
FT688_14305	COG2985	domain, Protein
FT688_14305	COG0569	domain protein
FT688_14430	COG0835	chemotaxis
FT688_14430	COG0784	Response regulator, receiver
FT688_14435	COG2755	lipolytic protein G-D-S-L family
FT688_14440	COG4181	ATPase activity
FT688_14445	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FT688_14450	COG1090	epimerase
FT688_14460	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FT688_14465	COG4935	Belongs to the peptidase S8 family
FT688_14465	COG2234	aminopeptidase activity
FT688_14475	COG3171	Protein conserved in bacteria
FT688_14480	COG2066	Belongs to the glutaminase family
FT688_14485	COG2897	thiosulfate sulfurtransferase activity
FT688_14535	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
FT688_14540	COG3300	MHYT domain
FT688_14540	COG5001	Diguanylate cyclase
FT688_14565	COG0688	phosphatidylethanolamine metabolic process
FT688_14575	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
FT688_14615	COG1278	Cold shock
FT688_14625	COG0840	transmembrane signaling receptor activity
FT688_14630	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FT688_14635	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FT688_14685	COG0848	biopolymer transport protein
FT688_14690	COG0811	peptide transport
FT688_14695	COG0811	peptide transport
FT688_14710	COG4174	ABC transporter (Permease)
FT688_14730	COG4608	Belongs to the ABC transporter superfamily
FT688_14740	COG2195	Cleaves the N-terminal amino acid of tripeptides
FT688_14750	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
FT688_14755	COG1073	alpha beta
FT688_14770	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FT688_14810	COG1858	cytochrome C peroxidase
FT688_14845	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FT688_14925	COG0521	Mo-molybdopterin cofactor biosynthetic process
FT688_14940	COG3610	response to peptide
FT688_14955	COG4176	ABC-type proline glycine betaine transport system permease component
FT688_14975	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FT688_14980	COG0384	phenazine biosynthesis protein PhzF
FT688_14985	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FT688_15005	COG0252	asparaginase activity
FT688_15010	COG3139	Protein of unknown function (DUF1315)
FT688_15030	COG0616	signal peptide processing
FT688_15040	COG0778	Nitroreductase
FT688_15055	COG2264	protein methyltransferase activity
FT688_15060	COG0604	alcohol dehydrogenase
FT688_15070	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FT688_15070	COG2190	(PTS) system
FT688_15070	COG1263	PTS System
FT688_15085	COG0439	Biotin carboxylase
FT688_15090	COG0511	ligase activity, forming carbon-carbon bonds
FT688_15095	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FT688_15100	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FT688_15130	COG3381	protein complex oligomerization
FT688_15140	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FT688_15150	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FT688_15155	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FT688_15155	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FT688_15175	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FT688_15180	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FT688_15185	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
FT688_15215	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FT688_15225	COG1722	exodeoxyribonuclease VII activity
FT688_15250	COG1534	Rna-binding protein
FT688_15275	COG0149	triose-phosphate isomerase activity
FT688_15280	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FT688_15295	COG0779	Required for maturation of 30S ribosomal subunits
FT688_15300	COG0195	Participates in both transcription termination and antitermination
FT688_15310	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FT688_15315	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FT688_15340	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
FT688_15350	COG0114	fumarate hydratase activity
FT688_15365	COG3279	Response regulator of the LytR AlgR family
FT688_15435	COG0312	modulator of DNA gyrase
FT688_15440	COG0312	modulator of DNA gyrase
FT688_15450	COG4974	Belongs to the 'phage' integrase family
FT688_15475	COG0789	Transcriptional regulator
FT688_15490	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FT688_15495	COG3545	Serine hydrolase
FT688_15505	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FT688_15515	COG0321	lipoyl(octanoyl) transferase activity
FT688_15520	COG2921	Belongs to the UPF0250 family
FT688_15525	COG1686	Belongs to the peptidase S11 family
FT688_15530	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FT688_15540	COG0772	Belongs to the SEDS family
FT688_15550	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
FT688_15555	COG0799	negative regulation of ribosome biogenesis
FT688_15575	COG0495	leucyl-tRNA aminoacylation
FT688_15580	COG2888	peptidyl-tyrosine sulfation
FT688_15590	COG4535	Mg2 and Co2 transporter CorC
FT688_15595	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FT688_15600	COG1702	phosphate starvation-inducible protein PhoH
FT688_15615	COG1335	isochorismatase
FT688_15625	COG3706	GGDEF domain
FT688_15630	COG0583	DNA-binding transcription factor activity
FT688_15675	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FT688_15685	COG0516	GMP reductase activity
FT688_15735	COG3214	Protein conserved in bacteria
FT688_15760	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
FT688_15765	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FT688_15770	COG1053	succinate dehydrogenase
FT688_15795	COG0739	heme binding
FT688_15810	COG0583	DNA-binding transcription factor activity
FT688_15830	COG0583	DNA-binding transcription factor activity
FT688_15835	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FT688_15865	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FT688_15870	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FT688_15895	COG0180	Tryptophanyl-tRNA synthetase
FT688_15910	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FT688_15920	COG1012	belongs to the aldehyde dehydrogenase family
FT688_15930	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FT688_15960	COG3097	Belongs to the UPF0267 family
FT688_15970	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
FT688_15980	COG0471	metal ion transport
FT688_15980	COG0490	domain, Protein
FT688_16025	COG0012	GTP binding
FT688_16040	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FT688_16050	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FT688_16055	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
FT688_16060	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
FT688_16065	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
FT688_16070	COG2890	protein-(glutamine-N5) methyltransferase activity
FT688_16080	COG2912	Transglutaminase-like superfamily
FT688_16090	COG1301	dicarboxylic acid transport
FT688_16115	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FT688_16120	COG1115	amino acid carrier protein
FT688_16135	COG0714	Associated with various cellular activities
FT688_16150	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FT688_16170	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FT688_16180	COG3091	SprT-like family
FT688_16225	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FT688_16240	COG1881	PFAM PEBP family protein
FT688_16245	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FT688_16250	COG0583	DNA-binding transcription factor activity
FT688_16260	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FT688_16270	COG0583	DNA-binding transcription factor activity
FT688_16275	COG1028	Short-chain dehydrogenase reductase Sdr
FT688_16280	COG0616	signal peptide processing
FT688_16305	COG0840	transmembrane signaling receptor activity
FT688_16315	COG2971	BadF BadG BcrA BcrD
FT688_16330	COG0444	Belongs to the ABC transporter superfamily
FT688_16335	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FT688_16345	COG4166	transmembrane transport
FT688_16415	COG1289	transmembrane transporter activity
FT688_16425	COG0746	molybdenum cofactor guanylyltransferase activity
FT688_16435	COG4662	Binding-protein-dependent transport system inner membrane component
FT688_16445	COG2204	response regulator
FT688_16450	COG3852	Histidine kinase
FT688_16460	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FT688_16550	COG3264	Mechanosensitive ion channel
FT688_16550	COG1196	nuclear chromosome segregation
FT688_16555	COG0469	pyruvate kinase activity
FT688_16570	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FT688_16570	COG4651	solute:proton antiporter activity
FT688_16580	COG2974	May be involved in recombination
FT688_16595	COG0419	ATPase involved in DNA repair
FT688_16630	COG2190	(PTS) system
FT688_16640	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FT688_16645	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FT688_16705	COG0745	RESPONSE REGULATOR receiver
FT688_16715	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FT688_16735	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
FT688_16755	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FT688_16795	COG0813	purine-nucleoside phosphorylase activity
FT688_16825	COG1283	sodium-dependent phosphate transmembrane transporter activity
FT688_16835	COG0531	amino acid
FT688_16840	COG0531	amino acid
FT688_16855	COG1396	sequence-specific DNA binding
FT688_16855	COG1917	Cupin 2, conserved barrel domain protein
FT688_16860	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FT688_16900	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FT688_16915	COG1136	(ABC) transporter
FT688_16915	COG0577	efflux transmembrane transporter activity
FT688_16945	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FT688_16950	COG0443	Heat shock 70 kDa protein
FT688_16955	COG0484	heat shock protein binding
FT688_16985	COG1285	pathogenesis
FT688_17055	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FT688_17075	COG0708	Exodeoxyribonuclease III
FT688_17140	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FT688_17150	COG1845	cytochrome c oxidase, subunit III
FT688_17155	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FT688_17160	COG0109	protoheme IX farnesyltransferase activity
FT688_17180	COG2175	clavaminate synthase activity
FT688_17185	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FT688_17195	COG4521	taurine ABC transporter
FT688_17240	COG0133	tryptophan synthase activity
FT688_17245	COG0134	indole-3-glycerol-phosphate synthase activity
FT688_17245	COG0135	phosphoribosylanthranilate isomerase activity
FT688_17270	COG0009	L-threonylcarbamoyladenylate synthase
FT688_17365	COG3306	glycosyltransferase involved in LPS biosynthesis
FT688_17370	COG0297	glycogen (starch) synthase activity
FT688_17385	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FT688_17395	COG1091	dTDP-4-dehydrorhamnose reductase activity
FT688_17415	COG3132	Protein of unknown function, DUF480
FT688_17455	COG1278	Cold shock
FT688_17485	COG1349	DNA-binding transcription factor activity
FT688_17495	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FT688_17545	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
FT688_17550	COG0784	Response regulator, receiver
FT688_17550	COG0835	chemotaxis
FT688_17555	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FT688_17560	COG1815	bacterial-type flagellum-dependent cell motility
FT688_17580	COG4787	bacterial-type flagellum-dependent cell motility
FT688_17590	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
FT688_17595	COG1706	bacterial-type flagellum-dependent cell motility
FT688_17625	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FT688_17630	COG2716	regulation of RNA biosynthetic process
FT688_17665	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FT688_17670	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FT688_17690	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FT688_17700	COG0590	tRNA wobble adenosine to inosine editing
FT688_17715	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FT688_17720	COG0704	Plays a role in the regulation of phosphate uptake
FT688_17725	COG1253	flavin adenine dinucleotide binding
FT688_17740	COG0531	amino acid
FT688_17765	COG0765	amino acid transport
FT688_17780	COG2271	Major facilitator Superfamily
FT688_17795	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FT688_17825	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
FT688_17830	COG0477	Major facilitator Superfamily
FT688_17835	COG0123	including yeast histone deacetylase and acetoin utilization protein
FT688_17845	COG1199	ATP-dependent helicase activity
FT688_17860	COG1448	Aminotransferase
FT688_17890	COG1663	tetraacyldisaccharide 4'-kinase activity
FT688_17895	COG2835	tetraacyldisaccharide 4'-kinase activity
FT688_17900	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FT688_17905	COG2197	response regulator
FT688_17970	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
FT688_17995	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FT688_18055	COG2119	membrane
FT688_18120	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FT688_18125	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FT688_18135	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FT688_18140	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FT688_18150	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
FT688_18155	COG0505	Belongs to the CarA family
FT688_18160	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FT688_18165	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FT688_18200	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FT688_18205	COG0513	Belongs to the DEAD box helicase family
FT688_18215	COG4104	PAAR repeat-containing protein
FT688_18230	COG0789	Transcriptional regulator
FT688_18250	COG0765	amino acid transport
FT688_18260	COG0493	'glutamate synthase
FT688_18270	COG1242	4 iron, 4 sulfur cluster binding
FT688_18340	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FT688_18340	COG0574	Belongs to the PEP-utilizing enzyme family
FT688_18380	COG1464	Belongs to the NlpA lipoprotein family
FT688_18385	COG0671	phosphoesterase, PA-phosphatase related
FT688_18410	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FT688_18415	COG0285	dihydrofolate synthase activity
FT688_18420	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
FT688_18425	COG2920	part of a sulfur-relay system
FT688_18435	COG0670	Belongs to the BI1 family
FT688_18465	COG0392	lysyltransferase activity
FT688_18465	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
FT688_18480	COG5001	Diguanylate cyclase
FT688_18485	COG0564	pseudouridine synthase activity
FT688_18500	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
FT688_18510	COG0625	glutathione transferase activity
FT688_18525	COG0367	asparagine synthase
FT688_18540	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FT688_18540	COG4651	solute:proton antiporter activity
FT688_18545	COG0647	UMP catabolic process
FT688_18550	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FT688_18555	COG1902	pentaerythritol trinitrate reductase activity
FT688_18560	COG1253	flavin adenine dinucleotide binding
FT688_18570	COG0247	lactate metabolic process
FT688_18570	COG0277	FAD linked oxidase domain protein
FT688_18580	COG2050	protein possibly involved in aromatic compounds catabolism
FT688_18595	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FT688_18610	COG0346	lactoylglutathione lyase activity
FT688_18645	COG4657	Part of a membrane complex involved in electron transport
FT688_18650	COG0697	spore germination
FT688_18670	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FT688_18675	COG1288	antiporter activity
FT688_18680	COG0436	Aminotransferase
FT688_18690	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FT688_18705	COG1566	PFAM secretion protein HlyD family protein
FT688_18715	COG1966	Carbon starvation protein
FT688_18720	COG3279	Response regulator of the LytR AlgR family
FT688_18730	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FT688_18730	COG2199	diguanylate cyclase activity
FT688_18745	COG2095	MarC family integral membrane protein
FT688_18755	COG0601	transmembrane transport
FT688_18760	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FT688_18780	COG0861	Integral membrane protein TerC family
FT688_18785	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FT688_18795	COG1301	dicarboxylic acid transport
FT688_18810	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FT688_18825	COG0537	adenosine 5'-monophosphoramidase activity
FT688_18865	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FT688_18895	COG3150	esterase
FT688_18900	COG1252	NADH dehydrogenase
FT688_18920	COG0393	Putative heavy-metal-binding
FT688_18950	COG4667	esterase of the alpha-beta hydrolase superfamily
FT688_18970	COG0527	aspartate kinase activity
FT688_18980	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FT688_18995	COG0456	acetyltransferase
FT688_19005	COG0596	Alpha beta hydrolase
FT688_19010	COG0346	lactoylglutathione lyase activity
FT688_19070	COG1136	(ABC) transporter
FT688_19100	COG0672	)-iron permease
FT688_19130	COG0659	secondary active sulfate transmembrane transporter activity
FT688_19155	COG0840	transmembrane signaling receptor activity
FT688_19175	COG0835	chemotaxis
FT688_19205	COG0437	4 iron, 4 sulfur cluster binding
FT688_19240	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FT688_19250	COG3842	ATPase activity
FT688_19260	COG0375	protein maturation
FT688_19275	COG0298	carbon dioxide binding
FT688_19305	COG3260	NADH ubiquinone oxidoreductase 20
FT688_19315	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
FT688_19315	COG3261	NADH dehydrogenase
FT688_19330	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FT688_19345	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FT688_19370	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FT688_19380	COG0326	Molecular chaperone. Has ATPase activity
FT688_19390	COG0563	adenylate kinase activity
FT688_19395	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
FT688_19400	COG3788	relative of glutathione S-transferase, MAPEG superfamily
FT688_19405	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FT688_19450	COG1535	isochorismatase
FT688_19450	COG3433	isochorismatase activity
FT688_19460	COG1028	Short-chain dehydrogenase reductase Sdr
FT688_19540	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FT688_19545	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FT688_19550	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FT688_19565	COG1570	exodeoxyribonuclease VII activity
FT688_19600	COG0519	Catalyzes the synthesis of GMP from XMP
FT688_19600	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FT688_19645	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FT688_19695	COG2062	phosphohistidine phosphatase, SixA
FT688_19735	COG1136	(ABC) transporter
FT688_19760	COG0544	peptidyl-prolyl cis-trans isomerase activity
FT688_19770	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FT688_19775	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FT688_19780	COG0776	regulation of translation
FT688_19785	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FT688_19790	COG0488	(ABC) transporter
FT688_19795	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FT688_19930	COG1028	Short-chain dehydrogenase reductase Sdr
FT688_19940	COG0730	response to heat
FT688_19950	COG0583	DNA-binding transcription factor activity
FT688_19955	COG0667	Aldo Keto reductase
FT688_19970	COG3706	GGDEF domain
FT688_19980	COG2723	6-phospho-beta-galactosidase activity
FT688_19985	COG5001	Diguanylate cyclase
FT688_19985	COG3300	MHYT domain
FT688_19995	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FT688_20040	COG1560	Kdo2-lipid A biosynthetic process
FT688_20045	COG1560	Kdo2-lipid A biosynthetic process
FT688_20100	COG0534	Mate efflux family protein
FT688_20120	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FT688_20125	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
FT688_20130	COG0697	spore germination
FT688_20135	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FT688_20175	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FT688_20180	COG3099	Belongs to the UPF0263 family
FT688_20190	COG2894	cell division
FT688_20200	COG3100	YcgL domain-containing protein
FT688_20205	COG2951	lytic endotransglycosylase activity
FT688_20210	COG1760	l-serine dehydratase
FT688_20220	COG1760	l-serine dehydratase
FT688_20225	COG3123	guanosine phosphorylase activity
FT688_20250	COG2067	long-chain fatty acid transport protein
FT688_20295	COG0714	Associated with various cellular activities
FT688_20300	COG0183	Belongs to the thiolase family
FT688_20325	COG3829	transcription factor binding
FT688_20335	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FT688_20340	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FT688_20350	COG0549	Belongs to the carbamate kinase family
FT688_20355	COG0697	spore germination
FT688_20360	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FT688_20360	COG3608	succinylglutamate desuccinylase aspartoacylase
FT688_20370	COG2068	MobA-Related Protein
FT688_20400	COG0402	S-adenosylhomocysteine deaminase activity
FT688_20420	COG2080	2 iron, 2 sulfur cluster binding
FT688_20455	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FT688_20455	COG0140	phosphoribosyl-ATP diphosphatase activity
FT688_20460	COG0107	imidazoleglycerol-phosphate synthase activity
FT688_20465	COG2198	Histidine kinase
FT688_20465	COG0784	Response regulator, receiver
FT688_20465	COG2205	protein histidine kinase activity
FT688_20470	COG2199	diguanylate cyclase activity
FT688_20485	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FT688_20525	COG1214	PFAM Peptidase M22, glycoprotease
FT688_20535	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FT688_20535	COG0596	Alpha beta hydrolase
FT688_20535	COG2226	methyltransferase
FT688_20540	COG0318	PFAM AMP-dependent synthetase and ligase
FT688_20545	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
FT688_20565	COG2832	Protein of unknown function (DUF454)
FT688_20570	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FT688_20580	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
FT688_20585	COG0582	viral genome integration into host DNA
FT688_20595	COG0393	Putative heavy-metal-binding
FT688_20770	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FT688_20945	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
FT688_20945	COG0617	tRNA 3'-terminal CCA addition
FT688_20945	COG0517	IMP dehydrogenase activity
FT688_20960	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
FT688_20970	COG3437	response regulator, receiver
FT688_20975	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FT688_20980	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
FT688_21010	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FT688_21020	COG0840	transmembrane signaling receptor activity
FT688_21030	COG0625	glutathione transferase activity
FT688_21035	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FT688_21035	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FT688_21040	COG0489	protein tyrosine kinase activity
FT688_21060	COG0306	phosphate transporter
FT688_21065	COG1530	ribonuclease E activity
FT688_21075	COG0546	phosphoglycolate phosphatase activity
FT688_21085	COG2814	Major facilitator Superfamily
FT688_21105	COG1399	metal-binding, possibly nucleic acid-binding protein
FT688_21110	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FT688_21115	COG0416	fatty acid biosynthetic process
FT688_21120	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FT688_21130	COG1028	Short-chain dehydrogenase reductase Sdr
FT688_21135	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FT688_21145	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FT688_21150	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FT688_21155	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FT688_21160	COG0470	DNA polymerase III
FT688_21165	COG0084	hydrolase, TatD family'
FT688_21180	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
FT688_21180	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FT688_21190	COG2995	paraquat-inducible protein a
FT688_21200	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FT688_21205	COG0372	Belongs to the citrate synthase family
FT688_21260	COG3141	response to X-ray
FT688_21275	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FT688_21300	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FT688_21300	COG0116	Belongs to the methyltransferase superfamily
FT688_21315	COG0167	dihydroorotate dehydrogenase activity
FT688_21330	COG0308	aminopeptidase N
FT688_21340	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
FT688_21345	COG1956	GAF domain-containing protein
FT688_21355	COG3278	Belongs to the heme-copper respiratory oxidase family
FT688_21370	COG2010	Cytochrome c
FT688_21395	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FT688_21405	COG0037	tRNA processing
FT688_21425	COG1869	D-ribose catabolic process
FT688_21430	COG1129	ABC transporter
FT688_21440	COG1879	ABC-type sugar transport system periplasmic component
FT688_21445	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FT688_21485	COG0776	regulation of translation
FT688_21495	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FT688_21500	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
FT688_21505	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FT688_21510	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FT688_21555	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FT688_21560	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FT688_21565	COG3313	Fe-S protein
FT688_21570	COG2942	2-epimerase
FT688_21575	COG3716	PTS system mannose fructose sorbose family IID component
FT688_21580	COG3715	PTS system
FT688_21585	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FT688_21585	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FT688_21605	COG2140	Oxalate decarboxylase
FT688_21640	COG5654	RES domain protein
FT688_21645	COG0513	Belongs to the DEAD box helicase family
FT688_21675	COG3706	GGDEF domain
FT688_21705	COG2824	Alkylphosphonate utilization operon protein PhnA
FT688_21750	COG0242	peptide deformylase activity
FT688_21775	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
FT688_21785	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FT688_21800	COG0205	6-phosphofructokinase activity
FT688_21805	COG1473	amidohydrolase
FT688_21810	COG1011	Hydrolase
FT688_21895	COG3148	PFAM DTW domain containing protein
FT688_21905	COG1181	Belongs to the D-alanine--D-alanine ligase family
FT688_21920	COG0513	Belongs to the DEAD box helicase family
FT688_21935	COG1742	UPF0060 membrane protein
FT688_21965	COG2329	Antibiotic biosynthesis monooxygenase
FT688_22000	COG2501	S4 domain
FT688_22085	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
FT688_22090	COG0514	ATP-dependent DNA helicase (RecQ)
FT688_22095	COG2766	serine protein kinase
FT688_22120	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FT688_22125	COG0586	Pfam SNARE associated Golgi protein
FT688_22150	COG2985	domain, Protein
FT688_22150	COG0569	domain protein
FT688_22155	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
FT688_22175	COG4565	transcriptional regulatory protein
FT688_22180	COG3290	protein histidine kinase activity
FT688_22230	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
FT688_22235	COG0437	4 iron, 4 sulfur cluster binding
FT688_22260	COG1051	belongs to the nudix hydrolase family
FT688_22280	COG3046	protein related to deoxyribodipyrimidine photolyase
FT688_22285	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FT688_22310	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FT688_22340	COG0583	DNA-binding transcription factor activity
FT688_22345	COG2910	NAD(P)H-binding
FT688_22365	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FT688_22375	COG1944	ATP diphosphatase activity
FT688_22380	COG2116	formate transmembrane transporter activity
FT688_22385	COG1882	Formate acetyltransferase