locus-tag class description AH4AK4_0001 PF00308 Bacterial dnaA protein AH4AK4_0001 PF11638 DnaA N-terminal domain AH4AK4_0001 PF08299 Bacterial dnaA protein helix-turn-helix AH4AK4_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain AH4AK4_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain AH4AK4_0002 PF02767 DNA polymerase III beta subunit, central domain AH4AK4_0003 PF02463 RecF/RecN/SMC N terminal domain AH4AK4_0004 PF18053 DNA gyrase B subunit insert domain AH4AK4_0004 PF01751 Toprim domain AH4AK4_0004 PF00986 DNA gyrase B subunit, carboxyl terminus AH4AK4_0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_0004 PF00204 DNA gyrase B AH4AK4_0006 PF08279 HTH domain AH4AK4_0006 PF13280 WYL domain AH4AK4_0007 PF12833 Helix-turn-helix domain AH4AK4_0007 PF01965 DJ-1/PfpI family AH4AK4_0009 PF12706 Beta-lactamase superfamily domain AH4AK4_0010 PF00011 Hsp20/alpha crystallin family AH4AK4_0011 PF00011 Hsp20/alpha crystallin family AH4AK4_0012 PF00155 Aminotransferase class I and II AH4AK4_0016 PF07690 Major Facilitator Superfamily AH4AK4_0017 PF00072 Response regulator receiver domain AH4AK4_0017 PF00486 Transcriptional regulatory protein, C terminal AH4AK4_0018 PF02702 Osmosensitive K+ channel His kinase sensor domain AH4AK4_0018 PF13493 Domain of unknown function (DUF4118) AH4AK4_0018 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_0018 PF13492 GAF domain AH4AK4_0018 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_0020 PF02669 K+-transporting ATPase, c chain AH4AK4_0022 PF03814 Potassium-transporting ATPase A subunit AH4AK4_0023 PF07992 Pyridine nucleotide-disulphide oxidoreductase AH4AK4_0023 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AH4AK4_0024 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_0024 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_0024 PF00497 Bacterial extracellular solute-binding proteins, family 3 AH4AK4_0025 PF00873 AcrB/AcrD/AcrF family AH4AK4_0026 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AH4AK4_0027 PF00440 Bacterial regulatory proteins, tetR family AH4AK4_0034 PF12146 Serine aminopeptidase, S33 AH4AK4_0035 PF00132 Bacterial transferase hexapeptide (six repeats) AH4AK4_0036 PF12105 SpoU, rRNA methylase, C-terminal AH4AK4_0036 PF00588 SpoU rRNA Methylase family AH4AK4_0037 PF13291 ACT domain AH4AK4_0037 PF04607 Region found in RelA / SpoT proteins AH4AK4_0037 PF02824 TGS domain AH4AK4_0038 PF01192 RNA polymerase Rpb6 AH4AK4_0039 PF00625 Guanylate kinase AH4AK4_0040 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AH4AK4_0043 PF00892 EamA-like transporter family AH4AK4_0047 PF03466 LysR substrate binding domain AH4AK4_0047 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_0048 PF00579 tRNA synthetases class I (W and Y) AH4AK4_0049 PF00582 Universal stress protein family AH4AK4_0050 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AH4AK4_0050 PF12241 Trans-2-enoyl-CoA reductase catalytic region AH4AK4_0050 PF07055 Enoyl reductase FAD binding domain AH4AK4_0051 PF08448 PAS fold AH4AK4_0051 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_0052 PF00210 Ferritin-like domain AH4AK4_0054 PF07690 Major Facilitator Superfamily AH4AK4_0055 PF01810 LysE type translocator AH4AK4_0058 PF16967 E-set like domain AH4AK4_0058 PF15976 CS1-pili formation C-terminal AH4AK4_0059 PF18649 EcpB C-terminal domain AH4AK4_0060 PF16449 Fimbrillin MatB AH4AK4_0061 PF00196 Bacterial regulatory proteins, luxR family AH4AK4_0061 PF00072 Response regulator receiver domain AH4AK4_0062 PF01627 Hpt domain AH4AK4_0062 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_0062 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_0062 PF00072 Response regulator receiver domain AH4AK4_0062 PF00989 PAS fold AH4AK4_0062 PF00497 Bacterial extracellular solute-binding proteins, family 3 AH4AK4_0064 PF06580 Histidine kinase AH4AK4_0064 PF07694 5TMR of 5TMR-LYT AH4AK4_0064 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_0065 PF04397 LytTr DNA-binding domain AH4AK4_0065 PF00072 Response regulator receiver domain AH4AK4_0066 PF07690 Major Facilitator Superfamily AH4AK4_0067 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AH4AK4_0067 PF02222 ATP-grasp domain AH4AK4_0068 PF00731 AIR carboxylase AH4AK4_0069 PF07715 TonB-dependent Receptor Plug Domain AH4AK4_0069 PF00593 TonB dependent receptor AH4AK4_0070 PF01177 Asp/Glu/Hydantoin racemase AH4AK4_0077 PF00899 ThiF family AH4AK4_0078 PF02657 Fe-S metabolism associated domain AH4AK4_0079 PF00266 Aminotransferase class-V AH4AK4_0081 PF13361 UvrD-like helicase C-terminal domain AH4AK4_0081 PF00580 UvrD/REP helicase N-terminal domain AH4AK4_0082 PF03707 Bacterial signalling protein N terminal repeat AH4AK4_0082 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_0082 PF00563 EAL domain AH4AK4_0085 PF08240 Alcohol dehydrogenase GroES-like domain AH4AK4_0085 PF00107 Zinc-binding dehydrogenase AH4AK4_0086 PF00155 Aminotransferase class I and II AH4AK4_0087 PF00440 Bacterial regulatory proteins, tetR family AH4AK4_0087 PF08360 QacR-like protein, C-terminal region AH4AK4_0088 PF01370 NAD dependent epimerase/dehydratase family AH4AK4_0091 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) AH4AK4_0095 PF03611 PTS system sugar-specific permease component AH4AK4_0097 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AH4AK4_0098 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AH4AK4_0098 PF00356 Bacterial regulatory proteins, lacI family AH4AK4_0099 PF00107 Zinc-binding dehydrogenase AH4AK4_0099 PF08240 Alcohol dehydrogenase GroES-like domain AH4AK4_0103 PF03748 Flagellar basal body-associated protein FliL AH4AK4_0104 PF04345 Chorismate lyase AH4AK4_0105 PF01040 UbiA prenyltransferase family AH4AK4_0106 PF01553 Acyltransferase AH4AK4_0107 PF01726 LexA DNA binding domain AH4AK4_0107 PF00717 Peptidase S24-like AH4AK4_0110 PF01554 MatE AH4AK4_0111 PF00588 SpoU rRNA Methylase family AH4AK4_0112 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_0112 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_0112 PF16527 Two-component sensor protein CpxA, periplasmic domain AH4AK4_0112 PF00672 HAMP domain AH4AK4_0113 PF00072 Response regulator receiver domain AH4AK4_0113 PF00486 Transcriptional regulatory protein, C terminal AH4AK4_0114 PF01545 Cation efflux family AH4AK4_0114 PF16916 Dimerisation domain of Zinc Transporter AH4AK4_0115 PF06426 Serine acetyltransferase, N-terminal AH4AK4_0115 PF00132 Bacterial transferase hexapeptide (six repeats) AH4AK4_0117 PF06005 Cell division protein ZapB AH4AK4_0119 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AH4AK4_0119 PF00476 DNA polymerase family A AH4AK4_0119 PF01367 5'-3' exonuclease, C-terminal SAM fold AH4AK4_0119 PF01612 3'-5' exonuclease AH4AK4_0120 PF00132 Bacterial transferase hexapeptide (six repeats) AH4AK4_0128 PF00356 Bacterial regulatory proteins, lacI family AH4AK4_0129 PF00703 Glycosyl hydrolases family 2 AH4AK4_0129 PF16353 Domain of unknown function(DUF4981) AH4AK4_0129 PF02837 Glycosyl hydrolases family 2, sugar binding domain AH4AK4_0129 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AH4AK4_0129 PF02929 Beta galactosidase small chain AH4AK4_0130 PF04074 YhcH/YjgK/YiaL AH4AK4_0131 PF13520 Amino acid permease AH4AK4_0132 PF01588 Putative tRNA binding domain AH4AK4_0133 PF13520 Amino acid permease AH4AK4_0134 PF13593 SBF-like CPA transporter family (DUF4137) AH4AK4_0138 PF00756 Putative esterase AH4AK4_0139 PF08240 Alcohol dehydrogenase GroES-like domain AH4AK4_0139 PF00107 Zinc-binding dehydrogenase AH4AK4_0140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_0140 PF03466 LysR substrate binding domain AH4AK4_0141 PF04151 Bacterial pre-peptidase C-terminal domain AH4AK4_0141 PF04389 Peptidase family M28 AH4AK4_0147 PF13361 UvrD-like helicase C-terminal domain AH4AK4_0147 PF00580 UvrD/REP helicase N-terminal domain AH4AK4_0152 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_0152 PF03466 LysR substrate binding domain AH4AK4_0154 PF01638 HxlR-like helix-turn-helix AH4AK4_0160 PF04972 BON domain AH4AK4_0163 PF02801 Beta-ketoacyl synthase, C-terminal domain AH4AK4_0163 PF00109 Beta-ketoacyl synthase, N-terminal domain AH4AK4_0166 PF14001 YdfZ protein AH4AK4_0169 PF06206 CpeT/CpcT family (DUF1001) AH4AK4_0170 PF03466 LysR substrate binding domain AH4AK4_0170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_0171 PF01810 LysE type translocator AH4AK4_0172 PF04143 Sulphur transport AH4AK4_0174 PF01810 LysE type translocator AH4AK4_0175 PF12833 Helix-turn-helix domain AH4AK4_0176 PF00892 EamA-like transporter family AH4AK4_0179 PF00171 Aldehyde dehydrogenase family AH4AK4_0180 PF01381 Helix-turn-helix AH4AK4_0180 PF07883 Cupin domain AH4AK4_0181 PF00202 Aminotransferase class-III AH4AK4_0182 PF00171 Aldehyde dehydrogenase family AH4AK4_0183 PF02540 NAD synthase AH4AK4_0183 PF00958 GMP synthase C terminal domain AH4AK4_0183 PF00117 Glutamine amidotransferase class-I AH4AK4_0184 PF03466 LysR substrate binding domain AH4AK4_0184 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_0185 PF00294 pfkB family carbohydrate kinase AH4AK4_0186 PF02082 Transcriptional regulator AH4AK4_0189 PF02646 RmuC family AH4AK4_0190 PF02386 Cation transport protein AH4AK4_0191 PF02254 TrkA-N domain AH4AK4_0191 PF02080 TrkA-C domain AH4AK4_0192 PF01189 16S rRNA methyltransferase RsmB/F AH4AK4_0192 PF01029 NusB family AH4AK4_0193 PF02911 Formyl transferase, C-terminal domain AH4AK4_0193 PF00551 Formyl transferase AH4AK4_0194 PF01327 Polypeptide deformylase AH4AK4_0196 PF02481 DNA recombination-mediator protein A AH4AK4_0196 PF17782 DprA winged helix domain AH4AK4_0197 PF04361 Protein of unknown function (DUF494) AH4AK4_0198 PF01396 Topoisomerase DNA binding C4 zinc finger AH4AK4_0199 PF01300 Telomere recombination AH4AK4_0200 PF01218 Coproporphyrinogen III oxidase AH4AK4_0201 PF01488 Shikimate / quinate 5-dehydrogenase AH4AK4_0201 PF08501 Shikimate dehydrogenase substrate binding domain AH4AK4_0201 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AH4AK4_0202 PF01926 50S ribosome-binding GTPase AH4AK4_0203 PF00034 Cytochrome c AH4AK4_0204 PF04220 Der GTPase activator (YihI) AH4AK4_0205 PF10675 Protein of unknown function (DUF2489) AH4AK4_0206 PF06969 HemN C-terminal domain AH4AK4_0206 PF04055 Radical SAM superfamily AH4AK4_0207 PF00962 Adenosine/AMP deaminase AH4AK4_0208 PF02954 Bacterial regulatory protein, Fis family AH4AK4_0208 PF00072 Response regulator receiver domain AH4AK4_0208 PF00158 Sigma-54 interaction domain AH4AK4_0209 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_0209 PF00989 PAS fold AH4AK4_0209 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_0211 PF03951 Glutamine synthetase, beta-Grasp domain AH4AK4_0211 PF00120 Glutamine synthetase, catalytic domain AH4AK4_0213 PF03631 Virulence factor BrkB AH4AK4_0214 PF02580 D-Tyr-tRNA(Tyr) deacylase AH4AK4_0216 PF09500 Putative thioesterase (yiiD_Cterm) AH4AK4_0216 PF00583 Acetyltransferase (GNAT) family AH4AK4_0218 PF00271 Helicase conserved C-terminal domain AH4AK4_0218 PF17191 RecG wedge domain AH4AK4_0218 PF00270 DEAD/DEAH box helicase AH4AK4_0219 PF13091 PLD-like domain AH4AK4_0220 PF02447 GntP family permease AH4AK4_0221 PF01202 Shikimate kinase AH4AK4_0222 PF00920 Dehydratase family AH4AK4_0223 PF01081 KDPG and KHG aldolase AH4AK4_0226 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AH4AK4_0226 PF00356 Bacterial regulatory proteins, lacI family AH4AK4_0229 PF01551 Peptidase family M23 AH4AK4_0230 PF01676 Metalloenzyme superfamily AH4AK4_0230 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AH4AK4_0231 PF00581 Rhodanese-like domain AH4AK4_0232 PF02556 Preprotein translocase subunit SecB AH4AK4_0233 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AH4AK4_0233 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AH4AK4_0234 PF01106 NifU-like domain AH4AK4_0234 PF01521 Iron-sulphur cluster biosynthesis AH4AK4_0235 PF00156 Phosphoribosyl transferase domain AH4AK4_0236 PF00561 alpha/beta hydrolase fold AH4AK4_0239 PF09371 Tex-like protein N-terminal domain AH4AK4_0239 PF00575 S1 RNA binding domain AH4AK4_0239 PF17674 HHH domain AH4AK4_0239 PF16921 Tex protein YqgF-like domain AH4AK4_0241 PF03449 Transcription elongation factor, N-terminal AH4AK4_0241 PF01272 Transcription elongation factor, GreA/GreB, C-term AH4AK4_0242 PF00072 Response regulator receiver domain AH4AK4_0242 PF00486 Transcriptional regulatory protein, C terminal AH4AK4_0243 PF00672 HAMP domain AH4AK4_0243 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_0243 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_0245 PF00338 Ribosomal protein S10p/S20e AH4AK4_0246 PF00297 Ribosomal protein L3 AH4AK4_0247 PF00573 Ribosomal protein L4/L1 family AH4AK4_0248 PF00276 Ribosomal protein L23 AH4AK4_0249 PF03947 Ribosomal Proteins L2, C-terminal domain AH4AK4_0249 PF00181 Ribosomal Proteins L2, RNA binding domain AH4AK4_0251 PF00189 Ribosomal protein S3, C-terminal domain AH4AK4_0251 PF07650 KH domain AH4AK4_0252 PF00252 Ribosomal protein L16p/L10e AH4AK4_0253 PF00831 Ribosomal L29 protein AH4AK4_0254 PF00366 Ribosomal protein S17 AH4AK4_0255 PF00238 Ribosomal protein L14p/L23e AH4AK4_0256 PF00467 KOW motif AH4AK4_0256 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AH4AK4_0257 PF00673 ribosomal L5P family C-terminus AH4AK4_0257 PF00281 Ribosomal protein L5 AH4AK4_0258 PF00253 Ribosomal protein S14p/S29e AH4AK4_0259 PF00410 Ribosomal protein S8 AH4AK4_0260 PF00347 Ribosomal protein L6 AH4AK4_0261 PF00333 Ribosomal protein S5, N-terminal domain AH4AK4_0261 PF03719 Ribosomal protein S5, C-terminal domain AH4AK4_0262 PF00327 Ribosomal protein L30p/L7e AH4AK4_0263 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AH4AK4_0264 PF00344 SecY translocase AH4AK4_0266 PF00163 Ribosomal protein S4/S9 N-terminal domain AH4AK4_0266 PF01479 S4 domain AH4AK4_0267 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AH4AK4_0267 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AH4AK4_0267 PF01000 RNA polymerase Rpb3/RpoA insert domain AH4AK4_0268 PF01196 Ribosomal protein L17 AH4AK4_0272 PF02254 TrkA-N domain AH4AK4_0272 PF00999 Sodium/hydrogen exchanger family AH4AK4_0273 PF02525 Flavodoxin-like fold AH4AK4_0274 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_0274 PF03466 LysR substrate binding domain AH4AK4_0275 PF00106 short chain dehydrogenase AH4AK4_0278 PF00326 Prolyl oligopeptidase family AH4AK4_0278 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AH4AK4_0284 PF07947 YhhN family AH4AK4_0285 PF07690 Major Facilitator Superfamily AH4AK4_0286 PF13533 Biotin-lipoyl like AH4AK4_0287 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_0287 PF03466 LysR substrate binding domain AH4AK4_0289 PF00375 Sodium:dicarboxylate symporter family AH4AK4_0290 PF10678 Protein of unknown function (DUF2492) AH4AK4_0291 PF01914 MarC family integral membrane protein AH4AK4_0292 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_0292 PF03466 LysR substrate binding domain AH4AK4_0293 PF02416 mttA/Hcf106 family AH4AK4_0295 PF01464 Transglycosylase SLT domain AH4AK4_0295 PF00497 Bacterial extracellular solute-binding proteins, family 3 AH4AK4_0297 PF13091 PLD-like domain AH4AK4_0299 PF00440 Bacterial regulatory proteins, tetR family AH4AK4_0300 PF07226 Protein of unknown function (DUF1422) AH4AK4_0303 PF00448 SRP54-type protein, GTPase domain AH4AK4_0303 PF02881 SRP54-type protein, helical bundle domain AH4AK4_0304 PF00005 ABC transporter AH4AK4_0305 PF18075 FtsX extracellular domain AH4AK4_0306 PF00140 Sigma-70 factor, region 1.2 AH4AK4_0306 PF04542 Sigma-70 region 2 AH4AK4_0306 PF04545 Sigma-70, region 4 AH4AK4_0307 PF00484 Carbonic anhydrase AH4AK4_0308 PF07702 UTRA domain AH4AK4_0308 PF00392 Bacterial regulatory proteins, gntR family AH4AK4_0309 PF01979 Amidohydrolase family AH4AK4_0310 PF00491 Arginase family AH4AK4_0311 PF01175 Urocanase Rossmann-like domain AH4AK4_0311 PF17392 Urocanase C-terminal domain AH4AK4_0311 PF17391 Urocanase N-terminal domain AH4AK4_0312 PF00221 Aromatic amino acid lyase AH4AK4_0313 PF01699 Sodium/calcium exchanger protein AH4AK4_0314 PF12792 CSS motif domain associated with EAL AH4AK4_0314 PF00563 EAL domain AH4AK4_0322 PF00263 Bacterial type II and III secretion system protein AH4AK4_0322 PF03958 Bacterial type II/III secretion system short domain AH4AK4_0325 PF00437 Type II/IV secretion system protein AH4AK4_0326 PF00482 Type II secretion system (T2SS), protein F AH4AK4_0329 PF07963 Prokaryotic N-terminal methylation motif AH4AK4_0329 PF14245 Type IV pilin PilA AH4AK4_0335 PF04085 rod shape-determining protein MreC AH4AK4_0336 PF04093 rod shape-determining protein MreD AH4AK4_0337 PF02545 Maf-like protein AH4AK4_0338 PF00575 S1 RNA binding domain AH4AK4_0338 PF10150 Ribonuclease E/G family AH4AK4_0339 PF13116 Protein of unknown function AH4AK4_0339 PF13502 AsmA-like C-terminal region AH4AK4_0340 PF00795 Carbon-nitrogen hydrolase AH4AK4_0341 PF01523 Putative modulator of DNA gyrase AH4AK4_0343 PF01914 MarC family integral membrane protein AH4AK4_0344 PF07690 Major Facilitator Superfamily AH4AK4_0346 PF04228 Putative neutral zinc metallopeptidase AH4AK4_0350 PF00999 Sodium/hydrogen exchanger family AH4AK4_0351 PF02574 Homocysteine S-methyltransferase AH4AK4_0351 PF02607 B12 binding domain AH4AK4_0351 PF02310 B12 binding domain AH4AK4_0351 PF00809 Pterin binding enzyme AH4AK4_0351 PF02965 Vitamin B12 dependent methionine synthase, activation domain AH4AK4_0353 PF18030 RimK PreATP-grasp domain AH4AK4_0353 PF08443 RimK-like ATP-grasp domain AH4AK4_0355 PF00072 Response regulator receiver domain AH4AK4_0355 PF00486 Transcriptional regulatory protein, C terminal AH4AK4_0358 PF01117 Aerolysin toxin AH4AK4_0358 PF03440 Aerolysin/Pertussis toxin (APT) domain AH4AK4_0359 PF13667 ThiC-associated domain AH4AK4_0359 PF01964 Radical SAM ThiC family AH4AK4_0360 PF02581 Thiamine monophosphate synthase AH4AK4_0361 PF00899 ThiF family AH4AK4_0363 PF05690 Thiazole biosynthesis protein ThiG AH4AK4_0364 PF04055 Radical SAM superfamily AH4AK4_0364 PF06968 Biotin and Thiamin Synthesis associated domain AH4AK4_0366 PF13302 Acetyltransferase (GNAT) domain AH4AK4_0367 PF00132 Bacterial transferase hexapeptide (six repeats) AH4AK4_0368 PF13036 Peptidoglycan-synthase activator LpoB AH4AK4_0370 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_0370 PF17158 Membrane-associated sensor, integral membrane domain AH4AK4_0371 PF06055 Exopolysaccharide synthesis, ExoD AH4AK4_0373 PF08803 Putative mono-oxygenase ydhR AH4AK4_0374 PF01638 HxlR-like helix-turn-helix AH4AK4_0378 PF07715 TonB-dependent Receptor Plug Domain AH4AK4_0378 PF00593 TonB dependent receptor AH4AK4_0379 PF00583 Acetyltransferase (GNAT) family AH4AK4_0380 PF00267 Gram-negative porin AH4AK4_0381 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AH4AK4_0382 PF03692 Putative zinc- or iron-chelating domain AH4AK4_0383 PF07719 Tetratricopeptide repeat AH4AK4_0383 PF07219 HemY protein N-terminus AH4AK4_0384 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AH4AK4_0385 PF02602 Uroporphyrinogen-III synthase HemD AH4AK4_0386 PF03900 Porphobilinogen deaminase, C-terminal domain AH4AK4_0386 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AH4AK4_0388 PF01295 Adenylate cyclase, class-I AH4AK4_0388 PF12633 Adenylate cyclase NT domain AH4AK4_0389 PF02230 Phospholipase/Carboxylesterase AH4AK4_0390 PF01491 Frataxin-like domain AH4AK4_0392 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AH4AK4_0392 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AH4AK4_0393 PF01678 Diaminopimelate epimerase AH4AK4_0395 PF02899 Phage integrase, N-terminal SAM-like domain AH4AK4_0395 PF00589 Phage integrase family AH4AK4_0396 PF13419 Haloacid dehalogenase-like hydrolase AH4AK4_0398 PF07722 Peptidase C26 AH4AK4_0401 PF04307 LexA-binding, inner membrane-associated putative hydrolase AH4AK4_0402 PF00994 Probable molybdopterin binding domain AH4AK4_0402 PF02464 Competence-damaged protein AH4AK4_0404 PF04204 Homoserine O-succinyltransferase AH4AK4_0406 PF01037 Lrp/AsnC ligand binding domain AH4AK4_0407 PF00884 Sulfatase AH4AK4_0409 PF00128 Alpha amylase, catalytic domain AH4AK4_0409 PF16657 Maltogenic Amylase, C-terminal domain AH4AK4_0409 PF02903 Alpha amylase, N-terminal ig-like domain AH4AK4_0410 PF02308 MgtC family AH4AK4_0414 PF00106 short chain dehydrogenase AH4AK4_0418 PF00465 Iron-containing alcohol dehydrogenase AH4AK4_0420 PF01053 Cys/Met metabolism PLP-dependent enzyme AH4AK4_0422 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AH4AK4_0422 PF12793 Sugar transport-related sRNA regulator N-term AH4AK4_0425 PF03280 Proteobacterial lipase chaperone protein AH4AK4_0426 PF00561 alpha/beta hydrolase fold AH4AK4_0428 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AH4AK4_0428 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AH4AK4_0429 PF02698 DUF218 domain AH4AK4_0430 PF08453 Peptidase family M9 N-terminal AH4AK4_0430 PF01752 Collagenase AH4AK4_0431 PF13193 AMP-binding enzyme C-terminal domain AH4AK4_0431 PF00501 AMP-binding enzyme AH4AK4_0432 PF13378 Enolase C-terminal domain-like AH4AK4_0433 PF00378 Enoyl-CoA hydratase/isomerase AH4AK4_0434 PF12697 Alpha/beta hydrolase family AH4AK4_0435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AH4AK4_0435 PF16582 Middle domain of thiamine pyrophosphate AH4AK4_0435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AH4AK4_0436 PF00425 chorismate binding enzyme AH4AK4_0437 PF01040 UbiA prenyltransferase family AH4AK4_0438 PF02554 Carbon starvation protein CstA AH4AK4_0438 PF13722 5TM C-terminal transporter carbon starvation CstA AH4AK4_0439 PF04328 Selenoprotein, putative AH4AK4_0440 PF02492 CobW/HypB/UreG, nucleotide-binding domain AH4AK4_0440 PF07683 Cobalamin synthesis protein cobW C-terminal domain AH4AK4_0445 PF00270 DEAD/DEAH box helicase AH4AK4_0445 PF03880 DbpA RNA binding domain AH4AK4_0445 PF00271 Helicase conserved C-terminal domain AH4AK4_0447 PF07670 Nucleoside recognition AH4AK4_0447 PF07662 Na+ dependent nucleoside transporter C-terminus AH4AK4_0447 PF01773 Na+ dependent nucleoside transporter N-terminus AH4AK4_0448 PF02368 Bacterial Ig-like domain (group 2) AH4AK4_0448 PF11999 Protein of unknown function (DUF3494) AH4AK4_0450 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AH4AK4_0451 PF01544 CorA-like Mg2+ transporter protein AH4AK4_0455 PF05068 Mannitol repressor AH4AK4_0456 PF01232 Mannitol dehydrogenase Rossmann domain AH4AK4_0456 PF08125 Mannitol dehydrogenase C-terminal domain AH4AK4_0457 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AH4AK4_0457 PF02378 Phosphotransferase system, EIIC AH4AK4_0457 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AH4AK4_0459 PF08206 Ribonuclease B OB domain AH4AK4_0459 PF17876 Cold shock domain AH4AK4_0459 PF00773 RNB domain AH4AK4_0460 PF03466 LysR substrate binding domain AH4AK4_0460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_0461 PF00765 Autoinducer synthase AH4AK4_0462 PF03472 Autoinducer binding domain AH4AK4_0462 PF00196 Bacterial regulatory proteins, luxR family AH4AK4_0463 PF01810 LysE type translocator AH4AK4_0464 PF02872 5'-nucleotidase, C-terminal domain AH4AK4_0464 PF00149 Calcineurin-like phosphoesterase AH4AK4_0465 PF03279 Bacterial lipid A biosynthesis acyltransferase AH4AK4_0467 PF00294 pfkB family carbohydrate kinase AH4AK4_0467 PF01467 Cytidylyltransferase-like AH4AK4_0468 PF02321 Outer membrane efflux protein AH4AK4_0469 PF00293 NUDIX domain AH4AK4_0470 PF06853 Protein of unknown function (DUF1249) AH4AK4_0471 PF00149 Calcineurin-like phosphoesterase AH4AK4_0472 PF05728 Uncharacterised protein family (UPF0227) AH4AK4_0473 PF00293 NUDIX domain AH4AK4_0475 PF07869 Protein of unknown function (DUF1656) AH4AK4_0476 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AH4AK4_0476 PF00529 HlyD membrane-fusion protein of T1SS AH4AK4_0477 PF04632 Fusaric acid resistance protein family AH4AK4_0479 PF01751 Toprim domain AH4AK4_0479 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_0479 PF00986 DNA gyrase B subunit, carboxyl terminus AH4AK4_0479 PF00204 DNA gyrase B AH4AK4_0480 PF03989 DNA gyrase C-terminal domain, beta-propeller AH4AK4_0480 PF00521 DNA gyrase/topoisomerase IV, subunit A AH4AK4_0489 PF00684 DnaJ central domain AH4AK4_0489 PF01556 DnaJ C terminal domain AH4AK4_0489 PF00226 DnaJ domain AH4AK4_0491 PF00578 AhpC/TSA family AH4AK4_0496 PF01553 Acyltransferase AH4AK4_0497 PF04012 PspA/IM30 family AH4AK4_0500 PF01541 GIY-YIG catalytic domain AH4AK4_0501 PF00892 EamA-like transporter family AH4AK4_0502 PF03167 Uracil DNA glycosylase superfamily AH4AK4_0504 PF03466 LysR substrate binding domain AH4AK4_0504 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_0505 PF00950 ABC 3 transport family AH4AK4_0506 PF00005 ABC transporter AH4AK4_0507 PF01297 Zinc-uptake complex component A periplasmic AH4AK4_0511 PF08525 Opacity-associated protein A N-terminal motif AH4AK4_0511 PF01551 Peptidase family M23 AH4AK4_0511 PF01476 LysM domain AH4AK4_0512 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AH4AK4_0516 PF02028 BCCT, betaine/carnitine/choline family transporter AH4AK4_0517 PF05190 MutS family domain IV AH4AK4_0517 PF05192 MutS domain III AH4AK4_0517 PF01624 MutS domain I AH4AK4_0517 PF05188 MutS domain II AH4AK4_0517 PF00488 MutS domain V AH4AK4_0519 PF02464 Competence-damaged protein AH4AK4_0520 PF00154 recA bacterial DNA recombination protein AH4AK4_0521 PF02631 RecX family AH4AK4_0522 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AH4AK4_0522 PF01411 tRNA synthetases class II (A) AH4AK4_0522 PF02272 DHHA1 domain AH4AK4_0523 PF00696 Amino acid kinase family AH4AK4_0523 PF01842 ACT domain AH4AK4_0523 PF13840 ACT domain AH4AK4_0524 PF02599 Global regulator protein family AH4AK4_0531 PF00768 D-alanyl-D-alanine carboxypeptidase AH4AK4_0532 PF09335 SNARE associated Golgi protein AH4AK4_0533 PF01595 Cyclin M transmembrane N-terminal domain AH4AK4_0533 PF03471 Transporter associated domain AH4AK4_0533 PF00571 CBS domain AH4AK4_0534 PF08264 Anticodon-binding domain of tRNA AH4AK4_0534 PF00133 tRNA synthetases class I (I, L, M and V) AH4AK4_0534 PF10458 Valyl tRNA synthetase tRNA binding arm AH4AK4_0535 PF04364 DNA polymerase III chi subunit, HolC AH4AK4_0536 PF00883 Cytosol aminopeptidase family, catalytic domain AH4AK4_0536 PF02789 Cytosol aminopeptidase family, N-terminal domain AH4AK4_0537 PF03739 Lipopolysaccharide export system permease LptF/LptG AH4AK4_0538 PF03739 Lipopolysaccharide export system permease LptF/LptG AH4AK4_0541 PF00909 Ammonium Transporter Family AH4AK4_0542 PF01938 TRAM domain AH4AK4_0542 PF05958 tRNA (Uracil-5-)-methyltransferase AH4AK4_0547 PF01026 TatD related DNase AH4AK4_0548 PF07662 Na+ dependent nucleoside transporter C-terminus AH4AK4_0548 PF01773 Na+ dependent nucleoside transporter N-terminus AH4AK4_0548 PF07670 Nucleoside recognition AH4AK4_0550 PF01791 DeoC/LacD family aldolase AH4AK4_0551 PF02885 Glycosyl transferase family, helical bundle domain AH4AK4_0551 PF00591 Glycosyl transferase family, a/b domain AH4AK4_0551 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AH4AK4_0552 PF01676 Metalloenzyme superfamily AH4AK4_0553 PF01048 Phosphorylase superfamily AH4AK4_0555 PF11737 Protein of unknown function (DUF3300) AH4AK4_0557 PF18429 Domain of unknown function (DUF5609) AH4AK4_0560 PF18073 Rubredoxin metal binding domain AH4AK4_0561 PF07238 PilZ domain AH4AK4_0562 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AH4AK4_0563 PF00216 Bacterial DNA-binding protein AH4AK4_0566 PF01207 Dihydrouridine synthase (Dus) AH4AK4_0567 PF01475 Ferric uptake regulator family AH4AK4_0570 PF05525 Branched-chain amino acid transport protein AH4AK4_0571 PF05175 Methyltransferase small domain AH4AK4_0572 PF00271 Helicase conserved C-terminal domain AH4AK4_0572 PF00270 DEAD/DEAH box helicase AH4AK4_0573 PF03883 Peroxide stress protein YaaA AH4AK4_0574 PF00437 Type II/IV secretion system protein AH4AK4_0575 PF00437 Type II/IV secretion system protein AH4AK4_0576 PF01168 Alanine racemase, N-terminal domain AH4AK4_0577 PF14748 Pyrroline-5-carboxylate reductase dimerisation AH4AK4_0577 PF03807 NADP oxidoreductase coenzyme F420-dependent AH4AK4_0578 PF02325 YGGT family AH4AK4_0579 PF02594 Uncharacterised ACR, YggU family COG1872 AH4AK4_0583 PF06062 Uncharacterised protein family (UPF0231) AH4AK4_0584 PF17853 GGDEF-like domain AH4AK4_0584 PF13556 PucR C-terminal helix-turn-helix domain AH4AK4_0584 PF05651 Putative sugar diacid recognition AH4AK4_0585 PF02447 GntP family permease AH4AK4_0586 PF02595 Glycerate kinase family AH4AK4_0588 PF00255 Glutathione peroxidase AH4AK4_0589 PF03466 LysR substrate binding domain AH4AK4_0589 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_0590 PF07670 Nucleoside recognition AH4AK4_0590 PF01773 Na+ dependent nucleoside transporter N-terminus AH4AK4_0590 PF07662 Na+ dependent nucleoside transporter C-terminus AH4AK4_0591 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AH4AK4_0591 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AH4AK4_0592 PF00472 RF-1 domain AH4AK4_0593 PF00543 Nitrogen regulatory protein P-II AH4AK4_0596 PF08402 TOBE domain AH4AK4_0596 PF00005 ABC transporter AH4AK4_0597 PF04261 Dyp-type peroxidase family AH4AK4_0598 PF01316 Arginine repressor, DNA binding domain AH4AK4_0598 PF02863 Arginine repressor, C-terminal domain AH4AK4_0599 PF00005 ABC transporter AH4AK4_0600 PF00497 Bacterial extracellular solute-binding proteins, family 3 AH4AK4_0601 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_0603 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_0604 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AH4AK4_0604 PF00056 lactate/malate dehydrogenase, NAD binding domain AH4AK4_0605 PF08238 Sel1 repeat AH4AK4_0606 PF00970 Oxidoreductase FAD-binding domain AH4AK4_0606 PF00175 Oxidoreductase NAD-binding domain AH4AK4_0606 PF00042 Globin AH4AK4_0607 PF02082 Transcriptional regulator AH4AK4_0608 PF03471 Transporter associated domain AH4AK4_0608 PF00571 CBS domain AH4AK4_0608 PF01595 Cyclin M transmembrane N-terminal domain AH4AK4_0609 PF01578 Cytochrome C assembly protein AH4AK4_0610 PF00448 SRP54-type protein, GTPase domain AH4AK4_0610 PF02978 Signal peptide binding domain AH4AK4_0610 PF02881 SRP54-type protein, helical bundle domain AH4AK4_0611 PF00886 Ribosomal protein S16 AH4AK4_0612 PF05239 PRC-barrel domain AH4AK4_0612 PF01782 RimM N-terminal domain AH4AK4_0613 PF01746 tRNA (Guanine-1)-methyltransferase AH4AK4_0614 PF01245 Ribosomal protein L19 AH4AK4_0616 PF02976 DNA mismatch repair enzyme MutH AH4AK4_0617 PF00293 NUDIX domain AH4AK4_0618 PF01590 GAF domain AH4AK4_0618 PF05524 PEP-utilising enzyme, N-terminal AH4AK4_0618 PF00391 PEP-utilising enzyme, mobile domain AH4AK4_0618 PF02896 PEP-utilising enzyme, TIM barrel domain AH4AK4_0619 PF01790 Prolipoprotein diacylglyceryl transferase AH4AK4_0620 PF00303 Thymidylate synthase AH4AK4_0621 PF06965 Na+/H+ antiporter 1 AH4AK4_0623 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_0623 PF03466 LysR substrate binding domain AH4AK4_0624 PF01022 Bacterial regulatory protein, arsR family AH4AK4_0625 PF01649 Ribosomal protein S20 AH4AK4_0626 PF03023 Lipid II flippase MurJ AH4AK4_0627 PF06574 FAD synthetase AH4AK4_0627 PF01687 Riboflavin kinase AH4AK4_0628 PF08264 Anticodon-binding domain of tRNA AH4AK4_0628 PF00133 tRNA synthetases class I (I, L, M and V) AH4AK4_0628 PF06827 Zinc finger found in FPG and IleRS AH4AK4_0629 PF01252 Signal peptidase (SPase) II AH4AK4_0630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AH4AK4_0631 PF02401 LytB protein AH4AK4_0632 PF07963 Prokaryotic N-terminal methylation motif AH4AK4_0632 PF14245 Type IV pilin PilA AH4AK4_0638 PF02540 NAD synthase AH4AK4_0638 PF00795 Carbon-nitrogen hydrolase AH4AK4_0639 PF00543 Nitrogen regulatory protein P-II AH4AK4_0641 PF02664 S-Ribosylhomocysteinase (LuxS) AH4AK4_0642 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_0643 PF00575 S1 RNA binding domain AH4AK4_0643 PF08206 Ribonuclease B OB domain AH4AK4_0643 PF00773 RNB domain AH4AK4_0643 PF08461 Ribonuclease R winged-helix domain AH4AK4_0643 PF17876 Cold shock domain AH4AK4_0644 PF00588 SpoU rRNA Methylase family AH4AK4_0644 PF08032 RNA 2'-O ribose methyltransferase substrate binding AH4AK4_0646 PF13673 Acetyltransferase (GNAT) domain AH4AK4_0648 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AH4AK4_0648 PF01411 tRNA synthetases class II (A) AH4AK4_0648 PF02272 DHHA1 domain AH4AK4_0649 PF01566 Natural resistance-associated macrophage protein AH4AK4_0650 PF01250 Ribosomal protein S6 AH4AK4_0651 PF01084 Ribosomal protein S18 AH4AK4_0652 PF01281 Ribosomal protein L9, N-terminal domain AH4AK4_0652 PF03948 Ribosomal protein L9, C-terminal domain AH4AK4_0653 PF00175 Oxidoreductase NAD-binding domain AH4AK4_0653 PF00970 Oxidoreductase FAD-binding domain AH4AK4_0658 PF00107 Zinc-binding dehydrogenase AH4AK4_0658 PF08240 Alcohol dehydrogenase GroES-like domain AH4AK4_0659 PF09335 SNARE associated Golgi protein AH4AK4_0660 PF05193 Peptidase M16 inactive domain AH4AK4_0660 PF00675 Insulinase (Peptidase family M16) AH4AK4_0661 PF04262 Glutamate-cysteine ligase AH4AK4_0662 PF03605 Anaerobic c4-dicarboxylate membrane transporter AH4AK4_0663 PF00206 Lyase AH4AK4_0663 PF10415 Fumarase C C-terminus AH4AK4_0664 PF04186 FxsA cytoplasmic membrane protein AH4AK4_0666 PF00166 Chaperonin 10 Kd subunit AH4AK4_0667 PF00118 TCP-1/cpn60 chaperonin family AH4AK4_0669 PF00563 EAL domain AH4AK4_0669 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_0669 PF03707 Bacterial signalling protein N terminal repeat AH4AK4_0671 PF00849 RNA pseudouridylate synthase AH4AK4_0672 PF00176 SNF2 family N-terminal domain AH4AK4_0672 PF12137 RNA polymerase recycling family C-terminal AH4AK4_0672 PF18339 RapA N-terminal Tudor like domain 1 AH4AK4_0672 PF18337 RapA N-terminal Tudor like domain AH4AK4_0672 PF00271 Helicase conserved C-terminal domain AH4AK4_0680 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_0681 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_0682 PF00005 ABC transporter AH4AK4_0682 PF12857 TOBE-like domain AH4AK4_0683 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_0683 PF03466 LysR substrate binding domain AH4AK4_0685 PF18416 N-acetylglucosamine binding protein domain 2 AH4AK4_0685 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AH4AK4_0687 PF00672 HAMP domain AH4AK4_0687 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_0687 PF12729 Four helix bundle sensory module for signal transduction AH4AK4_0692 PF11230 Protein of unknown function (DUF3029) AH4AK4_0693 PF04055 Radical SAM superfamily AH4AK4_0695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_0695 PF03466 LysR substrate binding domain AH4AK4_0696 PF00155 Aminotransferase class I and II AH4AK4_0697 PF11658 Cellulose biosynthesis protein BcsG AH4AK4_0699 PF06564 Cellulose biosynthesis protein BcsQ AH4AK4_0700 PF07238 PilZ domain AH4AK4_0700 PF00535 Glycosyl transferase family 2 AH4AK4_0701 PF03170 Bacterial cellulose synthase subunit AH4AK4_0702 PF01270 Glycosyl hydrolases family 8 AH4AK4_0703 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AH4AK4_0704 PF02583 Metal-sensitive transcriptional repressor AH4AK4_0707 PF11852 Domain of unknown function (DUF3372) AH4AK4_0707 PF17967 Pullulanase N2 domain AH4AK4_0707 PF18494 Pullulanase Ins domain AH4AK4_0707 PF03714 Bacterial pullanase-associated domain AH4AK4_0707 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AH4AK4_0708 PF00403 Heavy-metal-associated domain AH4AK4_0709 PF08534 Redoxin AH4AK4_0710 PF00270 DEAD/DEAH box helicase AH4AK4_0710 PF00271 Helicase conserved C-terminal domain AH4AK4_0713 PF08447 PAS fold AH4AK4_0713 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_0715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AH4AK4_0717 PF00132 Bacterial transferase hexapeptide (six repeats) AH4AK4_0718 PF10952 Protein of unknown function (DUF2753) AH4AK4_0719 PF00378 Enoyl-CoA hydratase/isomerase AH4AK4_0722 PF00106 short chain dehydrogenase AH4AK4_0723 PF04073 Aminoacyl-tRNA editing domain AH4AK4_0723 PF03129 Anticodon binding domain AH4AK4_0723 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AH4AK4_0724 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_0724 PF00672 HAMP domain AH4AK4_0725 PF07499 RuvA, C-terminal domain AH4AK4_0725 PF01330 RuvA N terminal domain AH4AK4_0726 PF17864 RuvB AAA lid domain AH4AK4_0726 PF05496 Holliday junction DNA helicase RuvB P-loop domain AH4AK4_0726 PF05491 RuvB C-terminal winged helix domain AH4AK4_0727 PF01654 Cytochrome bd terminal oxidase subunit I AH4AK4_0728 PF02322 Cytochrome bd terminal oxidase subunit II AH4AK4_0729 PF08173 Membrane bound YbgT-like protein AH4AK4_0730 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) AH4AK4_0731 PF03061 Thioesterase superfamily AH4AK4_0732 PF01618 MotA/TolQ/ExbB proton channel family AH4AK4_0733 PF02472 Biopolymer transport protein ExbD/TolR AH4AK4_0735 PF04052 TolB amino-terminal domain AH4AK4_0735 PF07676 WD40-like Beta Propeller Repeat AH4AK4_0736 PF00691 OmpA family AH4AK4_0737 PF16331 TolA binding protein trimerisation AH4AK4_0737 PF13174 Tetratricopeptide repeat AH4AK4_0742 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_0742 PF00672 HAMP domain AH4AK4_0743 PF02445 Quinolinate synthetase A protein AH4AK4_0744 PF01263 Aldose 1-epimerase AH4AK4_0745 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AH4AK4_0745 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AH4AK4_0746 PF02446 4-alpha-glucanotransferase AH4AK4_0747 PF02806 Alpha amylase, C-terminal all-beta domain AH4AK4_0747 PF00128 Alpha amylase, catalytic domain AH4AK4_0747 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AH4AK4_0748 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AH4AK4_0748 PF00128 Alpha amylase, catalytic domain AH4AK4_0749 PF01641 SelR domain AH4AK4_0751 PF00293 NUDIX domain AH4AK4_0752 PF00107 Zinc-binding dehydrogenase AH4AK4_0752 PF16884 N-terminal domain of oxidoreductase AH4AK4_0753 PF01047 MarR family AH4AK4_0756 PF01037 Lrp/AsnC ligand binding domain AH4AK4_0758 PF07690 Major Facilitator Superfamily AH4AK4_0763 PF00209 Sodium:neurotransmitter symporter family AH4AK4_0764 PF00209 Sodium:neurotransmitter symporter family AH4AK4_0767 PF00392 Bacterial regulatory proteins, gntR family AH4AK4_0767 PF00155 Aminotransferase class I and II AH4AK4_0769 PF01810 LysE type translocator AH4AK4_0770 PF01177 Asp/Glu/Hydantoin racemase AH4AK4_0772 PF00501 AMP-binding enzyme AH4AK4_0774 PF00583 Acetyltransferase (GNAT) family AH4AK4_0776 PF12592 Protein of unknown function (DUF3763) AH4AK4_0776 PF17868 AAA lid domain AH4AK4_0776 PF07728 AAA domain (dynein-related subfamily) AH4AK4_0777 PF05762 VWA domain containing CoxE-like protein AH4AK4_0778 PF00563 EAL domain AH4AK4_0778 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_0778 PF03707 Bacterial signalling protein N terminal repeat AH4AK4_0778 PF13188 PAS domain AH4AK4_0779 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_0779 PF00072 Response regulator receiver domain AH4AK4_0780 PF03144 Elongation factor Tu domain 2 AH4AK4_0780 PF00009 Elongation factor Tu GTP binding domain AH4AK4_0780 PF16658 Class II release factor RF3, C-terminal domain AH4AK4_0783 PF00583 Acetyltransferase (GNAT) family AH4AK4_0784 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AH4AK4_0788 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_0788 PF03466 LysR substrate binding domain AH4AK4_0789 PF04371 Porphyromonas-type peptidyl-arginine deiminase AH4AK4_0790 PF01425 Amidase AH4AK4_0792 PF00753 Metallo-beta-lactamase superfamily AH4AK4_0796 PF00111 2Fe-2S iron-sulfur cluster binding domain AH4AK4_0796 PF00970 Oxidoreductase FAD-binding domain AH4AK4_0796 PF00175 Oxidoreductase NAD-binding domain AH4AK4_0797 PF00271 Helicase conserved C-terminal domain AH4AK4_0797 PF00270 DEAD/DEAH box helicase AH4AK4_0798 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_0799 PF05643 Putative bacterial lipoprotein (DUF799) AH4AK4_0801 PF03783 Curli production assembly/transport component CsgG AH4AK4_0805 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase AH4AK4_0808 PF00445 Ribonuclease T2 family AH4AK4_0810 PF03060 Nitronate monooxygenase AH4AK4_0816 PF02954 Bacterial regulatory protein, Fis family AH4AK4_0817 PF01207 Dihydrouridine synthase (Dus) AH4AK4_0820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AH4AK4_0826 PF00072 Response regulator receiver domain AH4AK4_0827 PF00854 POT family AH4AK4_0828 PF00483 Nucleotidyl transferase AH4AK4_0830 PF00459 Inositol monophosphatase family AH4AK4_0831 PF03795 YCII-related domain AH4AK4_0832 PF04279 Intracellular septation protein A AH4AK4_0833 PF00282 Pyridoxal-dependent decarboxylase conserved domain AH4AK4_0835 PF03006 Haemolysin-III related AH4AK4_0836 PF06826 Predicted Permease Membrane Region AH4AK4_0836 PF02080 TrkA-C domain AH4AK4_0838 PF07690 Major Facilitator Superfamily AH4AK4_0839 PF03466 LysR substrate binding domain AH4AK4_0839 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_0840 PF01447 Thermolysin metallopeptidase, catalytic domain AH4AK4_0840 PF02868 Thermolysin metallopeptidase, alpha-helical domain AH4AK4_0840 PF04151 Bacterial pre-peptidase C-terminal domain AH4AK4_0840 PF03413 Peptidase propeptide and YPEB domain AH4AK4_0840 PF07504 Fungalysin/Thermolysin Propeptide Motif AH4AK4_0841 PF13302 Acetyltransferase (GNAT) domain AH4AK4_0842 PF13302 Acetyltransferase (GNAT) domain AH4AK4_0844 PF04074 YhcH/YjgK/YiaL AH4AK4_0845 PF00871 Acetokinase family AH4AK4_0846 PF00924 Mechanosensitive ion channel AH4AK4_0847 PF03734 L,D-transpeptidase catalytic domain AH4AK4_0847 PF17969 L,D-transpeptidase C-terminal domain AH4AK4_0848 PF00474 Sodium:solute symporter family AH4AK4_0850 PF02525 Flavodoxin-like fold AH4AK4_0851 PF13411 MerR HTH family regulatory protein AH4AK4_0855 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AH4AK4_0857 PF00005 ABC transporter AH4AK4_0857 PF12848 ABC transporter AH4AK4_0858 PF00571 CBS domain AH4AK4_0858 PF00478 IMP dehydrogenase / GMP reductase domain AH4AK4_0859 PF00267 Gram-negative porin AH4AK4_0860 PF00072 Response regulator receiver domain AH4AK4_0860 PF01584 CheW-like domain AH4AK4_0861 PF13472 GDSL-like Lipase/Acylhydrolase family AH4AK4_0862 PF00005 ABC transporter AH4AK4_0864 PF01370 NAD dependent epimerase/dehydratase family AH4AK4_0864 PF08338 Domain of unknown function (DUF1731) AH4AK4_0865 PF12792 CSS motif domain associated with EAL AH4AK4_0865 PF00563 EAL domain AH4AK4_0866 PF00155 Aminotransferase class I and II AH4AK4_0867 PF04389 Peptidase family M28 AH4AK4_0867 PF01483 Proprotein convertase P-domain AH4AK4_0868 PF02390 Putative methyltransferase AH4AK4_0869 PF04320 Protein with unknown function (DUF469) AH4AK4_0870 PF04960 Glutaminase AH4AK4_0871 PF00581 Rhodanese-like domain AH4AK4_0872 PF06082 Exopolysaccharide biosynthesis protein YbjH AH4AK4_0873 PF06251 Capsule biosynthesis GfcC AH4AK4_0874 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF AH4AK4_0878 PF06004 Bacterial protein of unknown function (DUF903) AH4AK4_0881 PF01810 LysE type translocator AH4AK4_0882 PF12833 Helix-turn-helix domain AH4AK4_0883 PF00664 ABC transporter transmembrane region AH4AK4_0883 PF00005 ABC transporter AH4AK4_0884 PF00561 alpha/beta hydrolase fold AH4AK4_0889 PF06877 Regulator of ribonuclease activity B AH4AK4_0890 PF00563 EAL domain AH4AK4_0890 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_0890 PF03707 Bacterial signalling protein N terminal repeat AH4AK4_0894 PF09905 DNA-binding protein VF530 AH4AK4_0895 PF02666 Phosphatidylserine decarboxylase AH4AK4_0896 PF03193 RsgA GTPase AH4AK4_0897 PF00929 Exonuclease AH4AK4_0903 PF00313 'Cold-shock' DNA-binding domain AH4AK4_0905 PF00672 HAMP domain AH4AK4_0905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_0907 PF00749 tRNA synthetases class I (E and Q), catalytic domain AH4AK4_0915 PF06483 Chitinase C AH4AK4_0915 PF00704 Glycosyl hydrolases family 18 AH4AK4_0918 PF02472 Biopolymer transport protein ExbD/TolR AH4AK4_0919 PF01618 MotA/TolQ/ExbB proton channel family AH4AK4_0920 PF01618 MotA/TolQ/ExbB proton channel family AH4AK4_0922 PF07715 TonB-dependent Receptor Plug Domain AH4AK4_0922 PF00593 TonB dependent receptor AH4AK4_0925 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_0926 PF12911 N-terminal TM domain of oligopeptide transport permease C AH4AK4_0926 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_0927 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AH4AK4_0928 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AH4AK4_0928 PF00005 ABC transporter AH4AK4_0929 PF00005 ABC transporter AH4AK4_0929 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AH4AK4_0931 PF07687 Peptidase dimerisation domain AH4AK4_0931 PF01546 Peptidase family M20/M25/M40 AH4AK4_0933 PF00156 Phosphoribosyl transferase domain AH4AK4_0935 PF07417 Sigma factor-binding transcriptional regulator Crl AH4AK4_0937 PF01472 PUA domain AH4AK4_0937 PF00696 Amino acid kinase family AH4AK4_0938 PF00171 Aldehyde dehydrogenase family AH4AK4_0940 PF00582 Universal stress protein family AH4AK4_0943 PF04324 BFD-like [2Fe-2S] binding domain AH4AK4_0943 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AH4AK4_0943 PF00384 Molybdopterin oxidoreductase AH4AK4_0943 PF01568 Molydopterin dinucleotide binding domain AH4AK4_0944 PF10414 Sirohaem synthase dimerisation region AH4AK4_0944 PF14824 Sirohaem biosynthesis protein central AH4AK4_0944 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AH4AK4_0946 PF00005 ABC transporter AH4AK4_0947 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_0948 PF00005 ABC transporter AH4AK4_0949 PF18267 Rubredoxin NAD+ reductase C-terminal domain AH4AK4_0949 PF07992 Pyridine nucleotide-disulphide oxidoreductase AH4AK4_0949 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AH4AK4_0949 PF04324 BFD-like [2Fe-2S] binding domain AH4AK4_0949 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AH4AK4_0949 PF13806 Rieske-like [2Fe-2S] domain AH4AK4_0950 PF07992 Pyridine nucleotide-disulphide oxidoreductase AH4AK4_0950 PF13806 Rieske-like [2Fe-2S] domain AH4AK4_0950 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AH4AK4_0950 PF04324 BFD-like [2Fe-2S] binding domain AH4AK4_0950 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AH4AK4_0950 PF18267 Rubredoxin NAD+ reductase C-terminal domain AH4AK4_0952 PF00294 pfkB family carbohydrate kinase AH4AK4_0953 PF04227 Indigoidine synthase A like protein AH4AK4_0954 PF00194 Eukaryotic-type carbonic anhydrase AH4AK4_0955 PF03150 Di-haem cytochrome c peroxidase AH4AK4_0955 PF00034 Cytochrome c AH4AK4_0958 PF00994 Probable molybdopterin binding domain AH4AK4_0961 PF06738 Putative threonine/serine exporter AH4AK4_0962 PF12821 Threonine/Serine exporter, ThrE AH4AK4_0963 PF00186 Dihydrofolate reductase AH4AK4_0964 PF00571 CBS domain AH4AK4_0964 PF00005 ABC transporter AH4AK4_0965 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_0966 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AH4AK4_0967 PF01507 Phosphoadenosine phosphosulfate reductase family AH4AK4_0968 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AH4AK4_0968 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AH4AK4_0969 PF00258 Flavodoxin AH4AK4_0969 PF00667 FAD binding domain AH4AK4_0969 PF00175 Oxidoreductase NAD-binding domain AH4AK4_0970 PF02567 Phenazine biosynthesis-like protein AH4AK4_0971 PF01336 OB-fold nucleic acid binding domain AH4AK4_0971 PF00152 tRNA synthetases class II (D, K and N) AH4AK4_0972 PF00472 RF-1 domain AH4AK4_0972 PF03462 PCRF domain AH4AK4_0973 PF02743 Cache domain AH4AK4_0973 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_0973 PF00672 HAMP domain AH4AK4_0974 PF03616 Sodium/glutamate symporter AH4AK4_0975 PF17763 Glutaminase/Asparaginase C-terminal domain AH4AK4_0975 PF00710 Asparaginase, N-terminal AH4AK4_0976 PF07023 Protein of unknown function (DUF1315) AH4AK4_0977 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AH4AK4_0977 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AH4AK4_0980 PF01343 Peptidase family S49 AH4AK4_0981 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AH4AK4_0981 PF07992 Pyridine nucleotide-disulphide oxidoreductase AH4AK4_0982 PF00881 Nitroreductase family AH4AK4_0983 PF12464 Maltose acetyltransferase AH4AK4_0983 PF14602 Hexapeptide repeat of succinyl-transferase AH4AK4_0985 PF00107 Zinc-binding dehydrogenase AH4AK4_0985 PF08240 Alcohol dehydrogenase GroES-like domain AH4AK4_0986 PF03466 LysR substrate binding domain AH4AK4_0986 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_0987 PF02378 Phosphotransferase system, EIIC AH4AK4_0987 PF00367 phosphotransferase system, EIIB AH4AK4_0987 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AH4AK4_0988 PF00474 Sodium:solute symporter family AH4AK4_0989 PF06196 Protein of unknown function (DUF997) AH4AK4_0990 PF00289 Biotin carboxylase, N-terminal domain AH4AK4_0990 PF02785 Biotin carboxylase C-terminal domain AH4AK4_0990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AH4AK4_0991 PF00364 Biotin-requiring enzyme AH4AK4_0992 PF01220 Dehydroquinase class II AH4AK4_0993 PF00501 AMP-binding enzyme AH4AK4_0993 PF16177 Acetyl-coenzyme A synthetase N-terminus AH4AK4_0993 PF13193 AMP-binding enzyme C-terminal domain AH4AK4_0994 PF00563 EAL domain AH4AK4_0994 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_0994 PF03707 Bacterial signalling protein N terminal repeat AH4AK4_0996 PF02613 Nitrate reductase delta subunit AH4AK4_0997 PF18364 Molybdopterin oxidoreductase N-terminal domain AH4AK4_0997 PF01568 Molydopterin dinucleotide binding domain AH4AK4_0997 PF00384 Molybdopterin oxidoreductase AH4AK4_0998 PF03264 NapC/NirT cytochrome c family, N-terminal region AH4AK4_0999 PF00072 Response regulator receiver domain AH4AK4_0999 PF00486 Transcriptional regulatory protein, C terminal AH4AK4_1000 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AH4AK4_1001 PF01627 Hpt domain AH4AK4_1001 PF00672 HAMP domain AH4AK4_1001 PF00072 Response regulator receiver domain AH4AK4_1001 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_1001 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_1003 PF00464 Serine hydroxymethyltransferase AH4AK4_1004 PF03477 ATP cone domain AH4AK4_1005 PF01872 RibD C-terminal domain AH4AK4_1005 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AH4AK4_1006 PF00677 Lumazine binding domain AH4AK4_1007 PF00925 GTP cyclohydrolase II AH4AK4_1007 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AH4AK4_1008 PF00885 6,7-dimethyl-8-ribityllumazine synthase AH4AK4_1009 PF01029 NusB family AH4AK4_1010 PF00586 AIR synthase related protein, N-terminal domain AH4AK4_1010 PF02769 AIR synthase related protein, C-terminal domain AH4AK4_1011 PF04608 Phosphatidylglycerophosphatase A AH4AK4_1013 PF00005 ABC transporter AH4AK4_1013 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AH4AK4_1014 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AH4AK4_1016 PF12911 N-terminal TM domain of oligopeptide transport permease C AH4AK4_1016 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_1017 PF02779 Transketolase, pyrimidine binding domain AH4AK4_1017 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AH4AK4_1017 PF02780 Transketolase, C-terminal domain AH4AK4_1018 PF00348 Polyprenyl synthetase AH4AK4_1019 PF02609 Exonuclease VII small subunit AH4AK4_1020 PF01618 MotA/TolQ/ExbB proton channel family AH4AK4_1021 PF00691 OmpA family AH4AK4_1021 PF13677 Membrane MotB of proton-channel complex MotA/MotB AH4AK4_1022 PF04972 BON domain AH4AK4_1023 PF02405 Permease MlaE AH4AK4_1024 PF00005 ABC transporter AH4AK4_1024 PF03459 TOBE domain AH4AK4_1027 PF07995 Glucose / Sorbosone dehydrogenase AH4AK4_1034 PF09557 Domain of unknown function (DUF2382) AH4AK4_1034 PF05239 PRC-barrel domain AH4AK4_1036 PF03449 Transcription elongation factor, N-terminal AH4AK4_1036 PF01272 Transcription elongation factor, GreA/GreB, C-term AH4AK4_1038 PF01985 CRS1 / YhbY (CRM) domain AH4AK4_1039 PF01728 FtsJ-like methyltransferase AH4AK4_1040 PF00004 ATPase family associated with various cellular activities (AAA) AH4AK4_1040 PF17862 AAA+ lid domain AH4AK4_1040 PF01434 Peptidase family M41 AH4AK4_1040 PF06480 FtsH Extracellular AH4AK4_1041 PF00809 Pterin binding enzyme AH4AK4_1042 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AH4AK4_1042 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AH4AK4_1042 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AH4AK4_1042 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AH4AK4_1043 PF00121 Triosephosphate isomerase AH4AK4_1044 PF03840 Preprotein translocase SecG subunit AH4AK4_1047 PF17384 RimP C-terminal SH3 domain AH4AK4_1047 PF02576 RimP N-terminal domain AH4AK4_1048 PF08529 NusA N-terminal domain AH4AK4_1048 PF00575 S1 RNA binding domain AH4AK4_1048 PF13184 NusA-like KH domain AH4AK4_1049 PF11987 Translation-initiation factor 2 AH4AK4_1049 PF08364 Bacterial translation initiation factor IF-2 associated region AH4AK4_1049 PF00009 Elongation factor Tu GTP binding domain AH4AK4_1049 PF04760 Translation initiation factor IF-2, N-terminal region AH4AK4_1050 PF02033 Ribosome-binding factor A AH4AK4_1051 PF01509 TruB family pseudouridylate synthase (N terminal domain) AH4AK4_1051 PF09157 Pseudouridine synthase II TruB, C-terminal AH4AK4_1051 PF16198 tRNA pseudouridylate synthase B C-terminal domain AH4AK4_1052 PF00312 Ribosomal protein S15 AH4AK4_1053 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AH4AK4_1053 PF01138 3' exoribonuclease family, domain 1 AH4AK4_1053 PF00575 S1 RNA binding domain AH4AK4_1053 PF03725 3' exoribonuclease family, domain 2 AH4AK4_1053 PF00013 KH domain AH4AK4_1054 PF07690 Major Facilitator Superfamily AH4AK4_1055 PF02635 DsrE/DsrF-like family AH4AK4_1057 PF12838 4Fe-4S dicluster domain AH4AK4_1059 PF03734 L,D-transpeptidase catalytic domain AH4AK4_1059 PF17969 L,D-transpeptidase C-terminal domain AH4AK4_1061 PF01523 Putative modulator of DNA gyrase AH4AK4_1062 PF01523 Putative modulator of DNA gyrase AH4AK4_1064 PF00258 Flavodoxin AH4AK4_1065 PF00258 Flavodoxin AH4AK4_1066 PF02899 Phage integrase, N-terminal SAM-like domain AH4AK4_1066 PF00589 Phage integrase family AH4AK4_1067 PF01741 Large-conductance mechanosensitive channel, MscL AH4AK4_1069 PF17768 RecJ OB domain AH4AK4_1069 PF02272 DHHA1 domain AH4AK4_1069 PF01368 DHH family AH4AK4_1071 PF02508 Rnf-Nqr subunit, membrane protein AH4AK4_1073 PF04055 Radical SAM superfamily AH4AK4_1073 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AH4AK4_1075 PF03099 Biotin/lipoate A/B protein ligase family AH4AK4_1076 PF04359 Protein of unknown function (DUF493) AH4AK4_1077 PF07943 Penicillin-binding protein 5, C-terminal domain AH4AK4_1077 PF00768 D-alanyl-D-alanine carboxypeptidase AH4AK4_1078 PF03330 Lytic transglycolase AH4AK4_1078 PF05036 Sporulation related domain AH4AK4_1079 PF13406 Transglycosylase SLT domain AH4AK4_1080 PF01098 Cell cycle protein AH4AK4_1081 PF03717 Penicillin-binding Protein dimerisation domain AH4AK4_1081 PF00905 Penicillin binding protein transpeptidase domain AH4AK4_1082 PF02590 Predicted SPOUT methyltransferase AH4AK4_1084 PF01467 Cytidylyltransferase-like AH4AK4_1087 PF13603 Leucyl-tRNA synthetase, Domain 2 AH4AK4_1087 PF00133 tRNA synthetases class I (I, L, M and V) AH4AK4_1087 PF08264 Anticodon-binding domain of tRNA AH4AK4_1088 PF07295 Zinc-ribbon containing domain AH4AK4_1089 PF00795 Carbon-nitrogen hydrolase AH4AK4_1090 PF00571 CBS domain AH4AK4_1090 PF03471 Transporter associated domain AH4AK4_1091 PF02130 Uncharacterized protein family UPF0054 AH4AK4_1092 PF02562 PhoH-like protein AH4AK4_1093 PF01938 TRAM domain AH4AK4_1093 PF00919 Uncharacterized protein family UPF0004 AH4AK4_1093 PF04055 Radical SAM superfamily AH4AK4_1094 PF01494 FAD binding domain AH4AK4_1095 PF00857 Isochorismatase family AH4AK4_1096 PF03466 LysR substrate binding domain AH4AK4_1096 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_1098 PF13419 Haloacid dehalogenase-like hydrolase AH4AK4_1100 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_1100 PF07694 5TMR of 5TMR-LYT AH4AK4_1102 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AH4AK4_1102 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AH4AK4_1104 PF09997 Predicted membrane protein (DUF2238) AH4AK4_1105 PF08207 Elongation factor P (EF-P) KOW-like domain AH4AK4_1105 PF09285 Elongation factor P, C-terminal AH4AK4_1105 PF01132 Elongation factor P (EF-P) OB domain AH4AK4_1107 PF00478 IMP dehydrogenase / GMP reductase domain AH4AK4_1109 PF08521 Two-component sensor kinase N-terminal AH4AK4_1109 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_1109 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_1110 PF00072 Response regulator receiver domain AH4AK4_1110 PF00486 Transcriptional regulatory protein, C terminal AH4AK4_1112 PF00106 short chain dehydrogenase AH4AK4_1114 PF00501 AMP-binding enzyme AH4AK4_1116 PF13649 Methyltransferase domain AH4AK4_1117 PF06224 Winged helix DNA-binding domain AH4AK4_1118 PF02313 Fumarate reductase subunit D AH4AK4_1119 PF02300 Fumarate reductase subunit C AH4AK4_1120 PF13183 4Fe-4S dicluster domain AH4AK4_1120 PF13085 2Fe-2S iron-sulfur cluster binding domain AH4AK4_1121 PF00890 FAD binding domain AH4AK4_1121 PF02910 Fumarate reductase flavoprotein C-term AH4AK4_1123 PF02743 Cache domain AH4AK4_1123 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_1123 PF00672 HAMP domain AH4AK4_1124 PF03009 Glycerophosphoryl diester phosphodiesterase family AH4AK4_1126 PF00924 Mechanosensitive ion channel AH4AK4_1126 PF12794 Mechanosensitive ion channel inner membrane domain 1 AH4AK4_1126 PF12795 Mechanosensitive ion channel porin domain AH4AK4_1128 PF08525 Opacity-associated protein A N-terminal motif AH4AK4_1128 PF01476 LysM domain AH4AK4_1128 PF01551 Peptidase family M23 AH4AK4_1131 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AH4AK4_1131 PF02753 Pili assembly chaperone PapD, C-terminal domain AH4AK4_1132 PF13953 PapC C-terminal domain AH4AK4_1132 PF13954 PapC N-terminal domain AH4AK4_1132 PF00577 Outer membrane usher protein AH4AK4_1133 PF02753 Pili assembly chaperone PapD, C-terminal domain AH4AK4_1133 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AH4AK4_1136 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_1136 PF03466 LysR substrate binding domain AH4AK4_1139 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_1139 PF03466 LysR substrate binding domain AH4AK4_1140 PF17092 Penicillin-binding protein OB-like domain AH4AK4_1140 PF00905 Penicillin binding protein transpeptidase domain AH4AK4_1140 PF00912 Transglycosylase AH4AK4_1145 PF00263 Bacterial type II and III secretion system protein AH4AK4_1145 PF11741 AMIN domain AH4AK4_1145 PF03958 Bacterial type II/III secretion system short domain AH4AK4_1145 PF07660 Secretin and TonB N terminus short domain AH4AK4_1146 PF01202 Shikimate kinase AH4AK4_1147 PF01761 3-dehydroquinate synthase AH4AK4_1149 PF02086 D12 class N6 adenine-specific DNA methyltransferase AH4AK4_1150 PF00834 Ribulose-phosphate 3 epimerase family AH4AK4_1151 PF13419 Haloacid dehalogenase-like hydrolase AH4AK4_1152 PF00579 tRNA synthetases class I (W and Y) AH4AK4_1154 PF00117 Glutamine amidotransferase class-I AH4AK4_1155 PF00202 Aminotransferase class-III AH4AK4_1156 PF04958 Arginine N-succinyltransferase beta subunit AH4AK4_1157 PF00171 Aldehyde dehydrogenase family AH4AK4_1159 PF13419 Haloacid dehalogenase-like hydrolase AH4AK4_1160 PF07690 Major Facilitator Superfamily AH4AK4_1161 PF07690 Major Facilitator Superfamily AH4AK4_1162 PF12848 ABC transporter AH4AK4_1162 PF00005 ABC transporter AH4AK4_1164 PF16657 Maltogenic Amylase, C-terminal domain AH4AK4_1164 PF00128 Alpha amylase, catalytic domain AH4AK4_1166 PF07859 alpha/beta hydrolase fold AH4AK4_1168 PF02080 TrkA-C domain AH4AK4_1168 PF03600 Citrate transporter AH4AK4_1177 PF01926 50S ribosome-binding GTPase AH4AK4_1177 PF06071 Protein of unknown function (DUF933) AH4AK4_1178 PF01195 Peptidyl-tRNA hydrolase AH4AK4_1179 PF00149 Calcineurin-like phosphoesterase AH4AK4_1179 PF02872 5'-nucleotidase, C-terminal domain AH4AK4_1180 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AH4AK4_1180 PF14572 Phosphoribosyl synthetase-associated domain AH4AK4_1183 PF03550 Outer membrane lipoprotein LolB AH4AK4_1184 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AH4AK4_1184 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AH4AK4_1184 PF01488 Shikimate / quinate 5-dehydrogenase AH4AK4_1185 PF03462 PCRF domain AH4AK4_1185 PF00472 RF-1 domain AH4AK4_1186 PF17827 PrmC N-terminal domain AH4AK4_1186 PF13847 Methyltransferase domain AH4AK4_1188 PF13369 Transglutaminase-like superfamily AH4AK4_1189 PF00793 DAHP synthetase I family AH4AK4_1190 PF00375 Sodium:dicarboxylate symporter family AH4AK4_1191 PF01228 Glycine radical AH4AK4_1192 PF03167 Uracil DNA glycosylase superfamily AH4AK4_1195 PF00923 Transaldolase/Fructose-6-phosphate aldolase AH4AK4_1196 PF01235 Sodium:alanine symporter family AH4AK4_1197 PF00144 Beta-lactamase AH4AK4_1198 PF07690 Major Facilitator Superfamily AH4AK4_1199 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_1199 PF03466 LysR substrate binding domain AH4AK4_1200 PF03652 Holliday junction resolvase AH4AK4_1201 PF02622 Uncharacterized ACR, COG1678 AH4AK4_1202 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AH4AK4_1202 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AH4AK4_1203 PF04452 RNA methyltransferase AH4AK4_1204 PF04231 Endonuclease I AH4AK4_1205 PF10263 SprT-like family AH4AK4_1206 PF02772 S-adenosylmethionine synthetase, central domain AH4AK4_1206 PF02773 S-adenosylmethionine synthetase, C-terminal domain AH4AK4_1206 PF00438 S-adenosylmethionine synthetase, N-terminal domain AH4AK4_1207 PF00456 Transketolase, thiamine diphosphate binding domain AH4AK4_1207 PF02780 Transketolase, C-terminal domain AH4AK4_1207 PF02779 Transketolase, pyrimidine binding domain AH4AK4_1208 PF01042 Endoribonuclease L-PSP AH4AK4_1210 PF00583 Acetyltransferase (GNAT) family AH4AK4_1212 PF03702 Anhydro-N-acetylmuramic acid kinase AH4AK4_1214 PF01476 LysM domain AH4AK4_1214 PF01551 Peptidase family M23 AH4AK4_1214 PF08525 Opacity-associated protein A N-terminal motif AH4AK4_1215 PF00579 tRNA synthetases class I (W and Y) AH4AK4_1216 PF01204 Trehalase AH4AK4_1218 PF01161 Phosphatidylethanolamine-binding protein AH4AK4_1220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_1220 PF03466 LysR substrate binding domain AH4AK4_1222 PF00155 Aminotransferase class I and II AH4AK4_1223 PF07690 Major Facilitator Superfamily AH4AK4_1224 PF03466 LysR substrate binding domain AH4AK4_1224 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_1225 PF00106 short chain dehydrogenase AH4AK4_1226 PF01343 Peptidase family S49 AH4AK4_1226 PF08496 Peptidase family S49 N-terminal AH4AK4_1227 PF04996 Succinylarginine dihydrolase AH4AK4_1228 PF08272 Topoisomerase I zinc-ribbon-like AH4AK4_1228 PF01131 DNA topoisomerase AH4AK4_1228 PF01396 Topoisomerase DNA binding C4 zinc finger AH4AK4_1228 PF01751 Toprim domain AH4AK4_1231 PF08447 PAS fold AH4AK4_1231 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_1232 PF00728 Glycosyl hydrolase family 20, catalytic domain AH4AK4_1232 PF02838 Glycosyl hydrolase family 20, domain 2 AH4AK4_1233 PF01869 BadF/BadG/BcrA/BcrD ATPase family AH4AK4_1236 PF00005 ABC transporter AH4AK4_1236 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AH4AK4_1237 PF00005 ABC transporter AH4AK4_1237 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AH4AK4_1238 PF12911 N-terminal TM domain of oligopeptide transport permease C AH4AK4_1238 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_1239 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_1240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AH4AK4_1242 PF00919 Uncharacterized protein family UPF0004 AH4AK4_1242 PF04055 Radical SAM superfamily AH4AK4_1242 PF18693 TRAM domain AH4AK4_1246 PF02049 Flagellar hook-basal body complex protein FliE AH4AK4_1247 PF01514 Secretory protein of YscJ/FliF family AH4AK4_1247 PF08345 Flagellar M-ring protein C-terminal AH4AK4_1248 PF14841 FliG middle domain AH4AK4_1248 PF14842 FliG N-terminal domain AH4AK4_1248 PF01706 FliG C-terminal domain AH4AK4_1250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AH4AK4_1250 PF18269 T3SS EscN ATPase C-terminal domain AH4AK4_1254 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AH4AK4_1254 PF02154 Flagellar motor switch protein FliM AH4AK4_1255 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AH4AK4_1256 PF04347 Flagellar biosynthesis protein, FliO AH4AK4_1257 PF00813 FliP family AH4AK4_1258 PF01313 Bacterial export proteins, family 3 AH4AK4_1259 PF01311 Bacterial export proteins, family 1 AH4AK4_1260 PF01312 FlhB HrpN YscU SpaS Family AH4AK4_1262 PF00771 FHIPEP family AH4AK4_1263 PF00448 SRP54-type protein, GTPase domain AH4AK4_1264 PF10609 NUBPL iron-transfer P-loop NTPase AH4AK4_1265 PF04539 Sigma-70 region 3 AH4AK4_1265 PF04545 Sigma-70, region 4 AH4AK4_1265 PF04542 Sigma-70 region 2 AH4AK4_1266 PF00072 Response regulator receiver domain AH4AK4_1267 PF04344 Chemotaxis phosphatase, CheZ AH4AK4_1268 PF01627 Hpt domain AH4AK4_1268 PF07194 P2 response regulator binding domain AH4AK4_1268 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_1268 PF02895 Signal transducing histidine kinase, homodimeric domain AH4AK4_1268 PF01584 CheW-like domain AH4AK4_1269 PF01339 CheB methylesterase AH4AK4_1269 PF00072 Response regulator receiver domain AH4AK4_1270 PF01618 MotA/TolQ/ExbB proton channel family AH4AK4_1271 PF13677 Membrane MotB of proton-channel complex MotA/MotB AH4AK4_1271 PF00691 OmpA family AH4AK4_1272 PF13614 AAA domain AH4AK4_1274 PF01584 CheW-like domain AH4AK4_1276 PF00005 ABC transporter AH4AK4_1277 PF03379 CcmB protein AH4AK4_1279 PF01578 Cytochrome C assembly protein AH4AK4_1280 PF04995 Heme exporter protein D (CcmD) AH4AK4_1281 PF03100 CcmE AH4AK4_1282 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AH4AK4_1282 PF01578 Cytochrome C assembly protein AH4AK4_1283 PF08534 Redoxin AH4AK4_1284 PF03918 Cytochrome C biogenesis protein AH4AK4_1286 PF04333 MlaA lipoprotein AH4AK4_1287 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AH4AK4_1287 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AH4AK4_1288 PF00462 Glutaredoxin AH4AK4_1289 PF01029 NusB family AH4AK4_1289 PF01189 16S rRNA methyltransferase RsmB/F AH4AK4_1292 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AH4AK4_1292 PF01243 Pyridoxamine 5'-phosphate oxidase AH4AK4_1293 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_1293 PF03466 LysR substrate binding domain AH4AK4_1294 PF01546 Peptidase family M20/M25/M40 AH4AK4_1298 PF13508 Acetyltransferase (GNAT) domain AH4AK4_1301 PF01668 SmpB protein AH4AK4_1302 PF03364 Polyketide cyclase / dehydrase and lipid transport AH4AK4_1304 PF13460 NAD(P)H-binding AH4AK4_1305 PF04355 SmpA / OmlA family AH4AK4_1306 PF00465 Iron-containing alcohol dehydrogenase AH4AK4_1307 PF01048 Phosphorylase superfamily AH4AK4_1308 PF00849 RNA pseudouridylate synthase AH4AK4_1309 PF01156 Inosine-uridine preferring nucleoside hydrolase AH4AK4_1312 PF07509 Protein of unknown function (DUF1523) AH4AK4_1313 PF12729 Four helix bundle sensory module for signal transduction AH4AK4_1313 PF00672 HAMP domain AH4AK4_1313 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_1314 PF01810 LysE type translocator AH4AK4_1316 PF02080 TrkA-C domain AH4AK4_1316 PF03471 Transporter associated domain AH4AK4_1316 PF00999 Sodium/hydrogen exchanger family AH4AK4_1318 PF02557 D-alanyl-D-alanine carboxypeptidase AH4AK4_1319 PF01546 Peptidase family M20/M25/M40 AH4AK4_1319 PF07687 Peptidase dimerisation domain AH4AK4_1320 PF03960 ArsC family AH4AK4_1323 PF03606 C4-dicarboxylate anaerobic carrier AH4AK4_1324 PF07687 Peptidase dimerisation domain AH4AK4_1324 PF01546 Peptidase family M20/M25/M40 AH4AK4_1326 PF03605 Anaerobic c4-dicarboxylate membrane transporter AH4AK4_1328 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AH4AK4_1329 PF00106 short chain dehydrogenase AH4AK4_1330 PF00698 Acyl transferase domain AH4AK4_1330 PF08240 Alcohol dehydrogenase GroES-like domain AH4AK4_1330 PF02801 Beta-ketoacyl synthase, C-terminal domain AH4AK4_1330 PF14765 Polyketide synthase dehydratase AH4AK4_1330 PF16197 Ketoacyl-synthetase C-terminal extension AH4AK4_1330 PF00550 Phosphopantetheine attachment site AH4AK4_1330 PF00109 Beta-ketoacyl synthase, N-terminal domain AH4AK4_1330 PF08659 KR domain AH4AK4_1331 PF01336 OB-fold nucleic acid binding domain AH4AK4_1331 PF00152 tRNA synthetases class II (D, K and N) AH4AK4_1334 PF00202 Aminotransferase class-III AH4AK4_1336 PF06968 Biotin and Thiamin Synthesis associated domain AH4AK4_1336 PF04055 Radical SAM superfamily AH4AK4_1337 PF00155 Aminotransferase class I and II AH4AK4_1338 PF12697 Alpha/beta hydrolase family AH4AK4_1338 PF08241 Methyltransferase domain AH4AK4_1340 PF01435 Peptidase family M48 AH4AK4_1341 PF03473 MOSC domain AH4AK4_1341 PF03476 MOSC N-terminal beta barrel domain AH4AK4_1341 PF03473 MOSC domain AH4AK4_1341 PF00111 2Fe-2S iron-sulfur cluster binding domain AH4AK4_1341 PF03476 MOSC N-terminal beta barrel domain AH4AK4_1341 PF00111 2Fe-2S iron-sulfur cluster binding domain AH4AK4_1342 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AH4AK4_1342 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AH4AK4_1342 PF07992 Pyridine nucleotide-disulphide oxidoreductase AH4AK4_1343 PF10371 Domain of unknown function AH4AK4_1343 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AH4AK4_1343 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AH4AK4_1343 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AH4AK4_1343 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AH4AK4_1344 PF04325 Protein of unknown function (DUF465) AH4AK4_1346 PF01554 MatE AH4AK4_1350 PF00291 Pyridoxal-phosphate dependent enzyme AH4AK4_1351 PF00465 Iron-containing alcohol dehydrogenase AH4AK4_1353 PF00440 Bacterial regulatory proteins, tetR family AH4AK4_1353 PF08359 YsiA-like protein, C-terminal region AH4AK4_1354 PF00171 Aldehyde dehydrogenase family AH4AK4_1356 PF00877 NlpC/P60 family AH4AK4_1357 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_1357 PF03466 LysR substrate binding domain AH4AK4_1361 PF08003 Protein of unknown function (DUF1698) AH4AK4_1362 PF13649 Methyltransferase domain AH4AK4_1363 PF01904 Protein of unknown function DUF72 AH4AK4_1364 PF00152 tRNA synthetases class II (D, K and N) AH4AK4_1364 PF01336 OB-fold nucleic acid binding domain AH4AK4_1364 PF02938 GAD domain AH4AK4_1365 PF01709 Transcriptional regulator AH4AK4_1366 PF08019 Phosphoethanolamine transferase EptA/EptB AH4AK4_1366 PF00884 Sulfatase AH4AK4_1367 PF00480 ROK family AH4AK4_1367 PF01047 MarR family AH4AK4_1368 PF01979 Amidohydrolase family AH4AK4_1369 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AH4AK4_1370 PF00367 phosphotransferase system, EIIB AH4AK4_1370 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AH4AK4_1370 PF02378 Phosphotransferase system, EIIC AH4AK4_1371 PF02838 Glycosyl hydrolase family 20, domain 2 AH4AK4_1371 PF03173 Putative carbohydrate binding domain AH4AK4_1371 PF00728 Glycosyl hydrolase family 20, catalytic domain AH4AK4_1371 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain AH4AK4_1374 PF00034 Cytochrome c AH4AK4_1374 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AH4AK4_1374 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AH4AK4_1375 PF00111 2Fe-2S iron-sulfur cluster binding domain AH4AK4_1375 PF01799 [2Fe-2S] binding domain AH4AK4_1376 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AH4AK4_1376 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AH4AK4_1377 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AH4AK4_1377 PF00749 tRNA synthetases class I (E and Q), catalytic domain AH4AK4_1378 PF01475 Ferric uptake regulator family AH4AK4_1380 PF00258 Flavodoxin AH4AK4_1381 PF01402 Ribbon-helix-helix protein, copG family AH4AK4_1383 PF00561 alpha/beta hydrolase fold AH4AK4_1384 PF03925 SeqA protein C-terminal domain AH4AK4_1384 PF17206 SeqA protein N-terminal domain AH4AK4_1385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AH4AK4_1385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AH4AK4_1385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AH4AK4_1385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AH4AK4_1387 PF12802 MarR family AH4AK4_1388 PF13406 Transglycosylase SLT domain AH4AK4_1389 PF01066 CDP-alcohol phosphatidyltransferase AH4AK4_1390 PF00005 ABC transporter AH4AK4_1392 PF13416 Bacterial extracellular solute-binding protein AH4AK4_1393 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AH4AK4_1393 PF07992 Pyridine nucleotide-disulphide oxidoreductase AH4AK4_1393 PF00403 Heavy-metal-associated domain AH4AK4_1394 PF02627 Carboxymuconolactone decarboxylase family AH4AK4_1396 PF05698 Bacterial trigger factor protein (TF) C-terminus AH4AK4_1398 PF07244 Surface antigen variable number repeat AH4AK4_1398 PF17243 POTRA domain TamA domain 1 AH4AK4_1398 PF01103 Surface antigen AH4AK4_1399 PF04357 TamB, inner membrane protein subunit of TAM complex AH4AK4_1403 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AH4AK4_1404 PF03707 Bacterial signalling protein N terminal repeat AH4AK4_1404 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_1404 PF00563 EAL domain AH4AK4_1405 PF01464 Transglycosylase SLT domain AH4AK4_1405 PF14718 Soluble lytic murein transglycosylase L domain AH4AK4_1406 PF00356 Bacterial regulatory proteins, lacI family AH4AK4_1409 PF03061 Thioesterase superfamily AH4AK4_1411 PF03372 Endonuclease/Exonuclease/phosphatase family AH4AK4_1412 PF01464 Transglycosylase SLT domain AH4AK4_1412 PF01476 LysM domain AH4AK4_1413 PF16123 Hydroxyacylglutathione hydrolase C-terminus AH4AK4_1413 PF00753 Metallo-beta-lactamase superfamily AH4AK4_1414 PF08241 Methyltransferase domain AH4AK4_1415 PF00075 RNase H AH4AK4_1416 PF00929 Exonuclease AH4AK4_1418 PF11849 Domain of unknown function (DUF3369) AH4AK4_1419 PF02770 Acyl-CoA dehydrogenase, middle domain AH4AK4_1419 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AH4AK4_1419 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AH4AK4_1419 PF09317 Domain of unknown function (DUF1974) AH4AK4_1420 PF13580 SIS domain AH4AK4_1421 PF13230 Glutamine amidotransferases class-II AH4AK4_1423 PF01933 Uncharacterised protein family UPF0052 AH4AK4_1425 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_1425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_1425 PF00072 Response regulator receiver domain AH4AK4_1425 PF17149 Periplasmic sensor domain found in signal transduction proteins AH4AK4_1425 PF01627 Hpt domain AH4AK4_1425 PF00672 HAMP domain AH4AK4_1428 PF00072 Response regulator receiver domain AH4AK4_1428 PF00196 Bacterial regulatory proteins, luxR family AH4AK4_1429 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AH4AK4_1429 PF07730 Histidine kinase AH4AK4_1429 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_1429 PF00672 HAMP domain AH4AK4_1430 PF06463 Molybdenum Cofactor Synthesis C AH4AK4_1430 PF04055 Radical SAM superfamily AH4AK4_1431 PF12838 4Fe-4S dicluster domain AH4AK4_1431 PF13187 4Fe-4S dicluster domain AH4AK4_1433 PF01568 Molydopterin dinucleotide binding domain AH4AK4_1433 PF10518 TAT (twin-arginine translocation) pathway signal sequence AH4AK4_1433 PF00384 Molybdopterin oxidoreductase AH4AK4_1433 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AH4AK4_1434 PF12800 4Fe-4S binding domain AH4AK4_1434 PF12838 4Fe-4S dicluster domain AH4AK4_1435 PF12837 4Fe-4S binding domain AH4AK4_1435 PF12801 4Fe-4S binding domain AH4AK4_1436 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AH4AK4_1437 PF03264 NapC/NirT cytochrome c family, N-terminal region AH4AK4_1438 PF00994 Probable molybdopterin binding domain AH4AK4_1439 PF01967 MoaC family AH4AK4_1440 PF02597 ThiS family AH4AK4_1441 PF02391 MoaE protein AH4AK4_1443 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_1444 PF00005 ABC transporter AH4AK4_1444 PF03459 TOBE domain AH4AK4_1445 PF12697 Alpha/beta hydrolase family AH4AK4_1446 PF06406 StbA protein AH4AK4_1448 PF00899 ThiF family AH4AK4_1449 PF03454 MoeA C-terminal region (domain IV) AH4AK4_1449 PF00994 Probable molybdopterin binding domain AH4AK4_1449 PF03453 MoeA N-terminal region (domain I and II) AH4AK4_1450 PF01227 GTP cyclohydrolase I AH4AK4_1451 PF00672 HAMP domain AH4AK4_1451 PF17200 Single Cache domain 2 AH4AK4_1451 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_1452 PF01268 Formate--tetrahydrofolate ligase AH4AK4_1454 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_1454 PF03466 LysR substrate binding domain AH4AK4_1455 PF04264 YceI-like domain AH4AK4_1460 PF07687 Peptidase dimerisation domain AH4AK4_1460 PF01546 Peptidase family M20/M25/M40 AH4AK4_1463 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AH4AK4_1463 PF17944 Arginine decarboxylase C-terminal helical extension AH4AK4_1463 PF17810 Arginine decarboxylase helical bundle domain AH4AK4_1464 PF02706 Chain length determinant protein AH4AK4_1465 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_1465 PF03707 Bacterial signalling protein N terminal repeat AH4AK4_1465 PF00563 EAL domain AH4AK4_1466 PF01844 HNH endonuclease AH4AK4_1468 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AH4AK4_1469 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AH4AK4_1469 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AH4AK4_1470 PF01479 S4 domain AH4AK4_1470 PF00849 RNA pseudouridylate synthase AH4AK4_1471 PF07690 Major Facilitator Superfamily AH4AK4_1473 PF03466 LysR substrate binding domain AH4AK4_1473 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_1475 PF10689 Protein of unknown function (DUF2496) AH4AK4_1479 PF04391 Protein of unknown function (DUF533) AH4AK4_1481 PF00155 Aminotransferase class I and II AH4AK4_1481 PF00392 Bacterial regulatory proteins, gntR family AH4AK4_1482 PF01654 Cytochrome bd terminal oxidase subunit I AH4AK4_1483 PF02322 Cytochrome bd terminal oxidase subunit II AH4AK4_1485 PF07690 Major Facilitator Superfamily AH4AK4_1487 PF00248 Aldo/keto reductase family AH4AK4_1491 PF03466 LysR substrate binding domain AH4AK4_1491 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_1492 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AH4AK4_1492 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AH4AK4_1493 PF00230 Major intrinsic protein AH4AK4_1494 PF07690 Major Facilitator Superfamily AH4AK4_1495 PF00455 DeoR C terminal sensor domain AH4AK4_1495 PF08220 DeoR-like helix-turn-helix domain AH4AK4_1497 PF01266 FAD dependent oxidoreductase AH4AK4_1497 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AH4AK4_1498 PF03009 Glycerophosphoryl diester phosphodiesterase family AH4AK4_1499 PF00793 DAHP synthetase I family AH4AK4_1500 PF02153 Prephenate dehydrogenase AH4AK4_1500 PF01817 Chorismate mutase type II AH4AK4_1501 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_1501 PF03466 LysR substrate binding domain AH4AK4_1502 PF04219 Protein of unknown function, DUF AH4AK4_1503 PF03974 Ecotin AH4AK4_1507 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AH4AK4_1507 PF00326 Prolyl oligopeptidase family AH4AK4_1508 PF07715 TonB-dependent Receptor Plug Domain AH4AK4_1508 PF00593 TonB dependent receptor AH4AK4_1509 PF00884 Sulfatase AH4AK4_1509 PF11893 Domain of unknown function (DUF3413) AH4AK4_1510 PF07208 Protein of unknown function (DUF1414) AH4AK4_1511 PF04245 37-kD nucleoid-associated bacterial protein AH4AK4_1513 PF01547 Bacterial extracellular solute-binding protein AH4AK4_1514 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_1514 PF14785 Maltose transport system permease protein MalF P2 domain AH4AK4_1515 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_1516 PF08402 TOBE domain AH4AK4_1516 PF00005 ABC transporter AH4AK4_1517 PF03976 Polyphosphate kinase 2 (PPK2) AH4AK4_1518 PF00561 alpha/beta hydrolase fold AH4AK4_1520 PF01594 AI-2E family transporter AH4AK4_1521 PF01206 Sulfurtransferase TusA AH4AK4_1523 PF01435 Peptidase family M48 AH4AK4_1523 PF13181 Tetratricopeptide repeat AH4AK4_1524 PF00578 AhpC/TSA family AH4AK4_1525 PF03960 ArsC family AH4AK4_1527 PF01979 Amidohydrolase family AH4AK4_1528 PF04336 Acyl carrier protein phosphodiesterase AH4AK4_1529 PF00497 Bacterial extracellular solute-binding proteins, family 3 AH4AK4_1530 PF01979 Amidohydrolase family AH4AK4_1531 PF03956 Lysine exporter LysO AH4AK4_1533 PF00005 ABC transporter AH4AK4_1534 PF00497 Bacterial extracellular solute-binding proteins, family 3 AH4AK4_1535 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_1536 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_1538 PF04055 Radical SAM superfamily AH4AK4_1539 PF03707 Bacterial signalling protein N terminal repeat AH4AK4_1539 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_1539 PF00563 EAL domain AH4AK4_1540 PF07992 Pyridine nucleotide-disulphide oxidoreductase AH4AK4_1540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AH4AK4_1543 PF00529 HlyD membrane-fusion protein of T1SS AH4AK4_1543 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AH4AK4_1544 PF02321 Outer membrane efflux protein AH4AK4_1546 PF07678 A-macroglobulin TED domain AH4AK4_1546 PF17962 Bacterial macroglobulin domain 6 AH4AK4_1546 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AH4AK4_1546 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AH4AK4_1546 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AH4AK4_1546 PF07703 Alpha-2-macroglobulin bait region domain AH4AK4_1546 PF00207 Alpha-2-macroglobulin family AH4AK4_1546 PF01835 MG2 domain AH4AK4_1546 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AH4AK4_1547 PF06832 Penicillin-Binding Protein C-terminus Family AH4AK4_1547 PF00905 Penicillin binding protein transpeptidase domain AH4AK4_1547 PF00912 Transglycosylase AH4AK4_1549 PF02568 Thiamine biosynthesis protein (ThiI) AH4AK4_1549 PF02926 THUMP domain AH4AK4_1551 PF03458 UPF0126 domain AH4AK4_1552 PF00700 Bacterial flagellin C-terminal helical region AH4AK4_1552 PF00669 Bacterial flagellin N-terminal helical region AH4AK4_1553 PF00669 Bacterial flagellin N-terminal helical region AH4AK4_1553 PF07196 Flagellin hook IN motif AH4AK4_1553 PF00700 Bacterial flagellin C-terminal helical region AH4AK4_1554 PF00669 Bacterial flagellin N-terminal helical region AH4AK4_1554 PF07196 Flagellin hook IN motif AH4AK4_1554 PF00700 Bacterial flagellin C-terminal helical region AH4AK4_1555 PF03646 FlaG protein AH4AK4_1556 PF07196 Flagellin hook IN motif AH4AK4_1556 PF02465 Flagellar hook-associated protein 2 N-terminus AH4AK4_1556 PF07195 Flagellar hook-associated protein 2 C-terminus AH4AK4_1557 PF02561 Flagellar protein FliS AH4AK4_1561 PF08666 SAF domain AH4AK4_1561 PF03102 NeuB family AH4AK4_1564 PF00202 Aminotransferase class-III AH4AK4_1565 PF02348 Cytidylyltransferase AH4AK4_1567 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AH4AK4_1568 PF02719 Polysaccharide biosynthesis protein AH4AK4_1569 PF01497 Periplasmic binding protein AH4AK4_1571 PF01048 Phosphorylase superfamily AH4AK4_1573 PF02535 ZIP Zinc transporter AH4AK4_1574 PF12729 Four helix bundle sensory module for signal transduction AH4AK4_1574 PF00672 HAMP domain AH4AK4_1574 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_1575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AH4AK4_1576 PF10576 Iron-sulfur binding domain of endonuclease III AH4AK4_1576 PF00633 Helix-hairpin-helix motif AH4AK4_1576 PF00730 HhH-GPD superfamily base excision DNA repair protein AH4AK4_1577 PF02508 Rnf-Nqr subunit, membrane protein AH4AK4_1578 PF04205 FMN-binding domain AH4AK4_1580 PF03116 NQR2, RnfD, RnfE family AH4AK4_1581 PF13375 RnfC Barrel sandwich hybrid domain AH4AK4_1581 PF10531 SLBB domain AH4AK4_1581 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AH4AK4_1581 PF12838 4Fe-4S dicluster domain AH4AK4_1582 PF04060 Putative Fe-S cluster AH4AK4_1583 PF02508 Rnf-Nqr subunit, membrane protein AH4AK4_1584 PF00892 EamA-like transporter family AH4AK4_1586 PF08447 PAS fold AH4AK4_1586 PF13426 PAS domain AH4AK4_1586 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_1589 PF07055 Enoyl reductase FAD binding domain AH4AK4_1589 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AH4AK4_1589 PF12241 Trans-2-enoyl-CoA reductase catalytic region AH4AK4_1590 PF03606 C4-dicarboxylate anaerobic carrier AH4AK4_1591 PF00155 Aminotransferase class I and II AH4AK4_1594 PF00462 Glutaredoxin AH4AK4_1595 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AH4AK4_1596 PF00271 Helicase conserved C-terminal domain AH4AK4_1596 PF04851 Type III restriction enzyme, res subunit AH4AK4_1598 PF00529 HlyD membrane-fusion protein of T1SS AH4AK4_1598 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AH4AK4_1599 PF11742 Protein of unknown function (DUF3302) AH4AK4_1600 PF12794 Mechanosensitive ion channel inner membrane domain 1 AH4AK4_1600 PF00924 Mechanosensitive ion channel AH4AK4_1600 PF12795 Mechanosensitive ion channel porin domain AH4AK4_1601 PF02554 Carbon starvation protein CstA AH4AK4_1602 PF04397 LytTr DNA-binding domain AH4AK4_1602 PF00072 Response regulator receiver domain AH4AK4_1603 PF07694 5TMR of 5TMR-LYT AH4AK4_1603 PF06580 Histidine kinase AH4AK4_1604 PF01966 HD domain AH4AK4_1604 PF11871 Domain of unknown function (DUF3391) AH4AK4_1605 PF00171 Aldehyde dehydrogenase family AH4AK4_1605 PF00465 Iron-containing alcohol dehydrogenase AH4AK4_1606 PF01914 MarC family integral membrane protein AH4AK4_1607 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AH4AK4_1608 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_1609 PF12911 N-terminal TM domain of oligopeptide transport permease C AH4AK4_1609 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_1610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AH4AK4_1610 PF00005 ABC transporter AH4AK4_1611 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AH4AK4_1611 PF00005 ABC transporter AH4AK4_1613 PF03741 Integral membrane protein TerC family AH4AK4_1614 PF00842 Alanine racemase, C-terminal domain AH4AK4_1614 PF01168 Alanine racemase, N-terminal domain AH4AK4_1617 PF00375 Sodium:dicarboxylate symporter family AH4AK4_1620 PF01979 Amidohydrolase family AH4AK4_1622 PF00672 HAMP domain AH4AK4_1622 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_1623 PF01230 HIT domain AH4AK4_1631 PF02355 Protein export membrane protein AH4AK4_1631 PF13721 SecD export protein N-terminal TM region AH4AK4_1631 PF07549 SecD/SecF GG Motif AH4AK4_1633 PF07549 SecD/SecF GG Motif AH4AK4_1633 PF02355 Protein export membrane protein AH4AK4_1636 PF05661 Protein of unknown function (DUF808) AH4AK4_1637 PF08439 Oligopeptidase F AH4AK4_1637 PF01432 Peptidase family M3 AH4AK4_1638 PF01432 Peptidase family M3 AH4AK4_1638 PF08439 Oligopeptidase F AH4AK4_1639 PF05728 Uncharacterised protein family (UPF0227) AH4AK4_1640 PF07992 Pyridine nucleotide-disulphide oxidoreductase AH4AK4_1641 PF01906 Putative heavy-metal-binding AH4AK4_1642 PF00884 Sulfatase AH4AK4_1644 PF01842 ACT domain AH4AK4_1644 PF00696 Amino acid kinase family AH4AK4_1646 PF00696 Amino acid kinase family AH4AK4_1646 PF00583 Acetyltransferase (GNAT) family AH4AK4_1648 PF01625 Peptide methionine sulfoxide reductase AH4AK4_1656 PF00005 ABC transporter AH4AK4_1658 PF03600 Citrate transporter AH4AK4_1660 PF07690 Major Facilitator Superfamily AH4AK4_1664 PF01593 Flavin containing amine oxidoreductase AH4AK4_1665 PF03239 Iron permease FTR1 family AH4AK4_1671 PF04168 A predicted alpha-helical domain with a conserved ER motif. AH4AK4_1671 PF14403 Circularly permuted ATP-grasp type 2 AH4AK4_1672 PF14403 Circularly permuted ATP-grasp type 2 AH4AK4_1675 PF00916 Sulfate permease family AH4AK4_1675 PF01740 STAS domain AH4AK4_1678 PF05638 Type VI secretion system effector, Hcp AH4AK4_1680 PF04717 Type VI secretion system, phage-baseplate injector AH4AK4_1695 PF17871 AAA lid domain AH4AK4_1695 PF00004 ATPase family associated with various cellular activities (AAA) AH4AK4_1695 PF10431 C-terminal, D2-small domain, of ClpB protein AH4AK4_1695 PF07724 AAA domain (Cdc48 subfamily) AH4AK4_1696 PF06505 Activator of aromatic catabolism AH4AK4_1696 PF02830 V4R domain AH4AK4_1696 PF00158 Sigma-54 interaction domain AH4AK4_1696 PF02954 Bacterial regulatory protein, Fis family AH4AK4_1702 PF04717 Type VI secretion system, phage-baseplate injector AH4AK4_1705 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AH4AK4_1705 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AH4AK4_1706 PF13247 4Fe-4S dicluster domain AH4AK4_1707 PF03916 Polysulphide reductase, NrfD AH4AK4_1708 PF00374 Nickel-dependent hydrogenase AH4AK4_1709 PF01750 Hydrogenase maturation protease AH4AK4_1710 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE AH4AK4_1711 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AH4AK4_1712 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_1713 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_1713 PF12911 N-terminal TM domain of oligopeptide transport permease C AH4AK4_1715 PF00005 ABC transporter AH4AK4_1716 PF00005 ABC transporter AH4AK4_1717 PF02492 CobW/HypB/UreG, nucleotide-binding domain AH4AK4_1720 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AH4AK4_1721 PF00586 AIR synthase related protein, N-terminal domain AH4AK4_1721 PF02769 AIR synthase related protein, C-terminal domain AH4AK4_1722 PF01924 Hydrogenase formation hypA family AH4AK4_1723 PF01455 HupF/HypC family AH4AK4_1724 PF07503 HypF finger AH4AK4_1724 PF01300 Telomere recombination AH4AK4_1724 PF00708 Acylphosphatase AH4AK4_1724 PF17788 HypF Kae1-like domain AH4AK4_1727 PF02705 K+ potassium transporter AH4AK4_1730 PF02132 RecR protein AH4AK4_1730 PF13662 Toprim domain AH4AK4_1731 PF00183 Hsp90 protein AH4AK4_1731 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_1732 PF05191 Adenylate kinase, active site lid AH4AK4_1733 PF00762 Ferrochelatase AH4AK4_1736 PF00294 pfkB family carbohydrate kinase AH4AK4_1738 PF00672 HAMP domain AH4AK4_1738 PF17200 Single Cache domain 2 AH4AK4_1738 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_1742 PF00563 EAL domain AH4AK4_1742 PF03707 Bacterial signalling protein N terminal repeat AH4AK4_1742 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_1743 PF00483 Nucleotidyl transferase AH4AK4_1746 PF07273 Protein of unknown function (DUF1439) AH4AK4_1747 PF00425 chorismate binding enzyme AH4AK4_1748 PF00501 AMP-binding enzyme AH4AK4_1748 PF13193 AMP-binding enzyme C-terminal domain AH4AK4_1749 PF00550 Phosphopantetheine attachment site AH4AK4_1749 PF00857 Isochorismatase family AH4AK4_1750 PF00975 Thioesterase domain AH4AK4_1750 PF00668 Condensation domain AH4AK4_1750 PF00501 AMP-binding enzyme AH4AK4_1750 PF00550 Phosphopantetheine attachment site AH4AK4_1750 PF13193 AMP-binding enzyme C-terminal domain AH4AK4_1752 PF00501 AMP-binding enzyme AH4AK4_1752 PF07993 Male sterility protein AH4AK4_1752 PF00550 Phosphopantetheine attachment site AH4AK4_1752 PF00668 Condensation domain AH4AK4_1752 PF13193 AMP-binding enzyme C-terminal domain AH4AK4_1753 PF00975 Thioesterase domain AH4AK4_1753 PF00550 Phosphopantetheine attachment site AH4AK4_1753 PF00668 Condensation domain AH4AK4_1753 PF13193 AMP-binding enzyme C-terminal domain AH4AK4_1753 PF00501 AMP-binding enzyme AH4AK4_1754 PF01497 Periplasmic binding protein AH4AK4_1755 PF01648 4'-phosphopantetheinyl transferase superfamily AH4AK4_1755 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AH4AK4_1756 PF00005 ABC transporter AH4AK4_1757 PF01032 FecCD transport family AH4AK4_1758 PF01032 FecCD transport family AH4AK4_1759 PF07715 TonB-dependent Receptor Plug Domain AH4AK4_1759 PF00593 TonB dependent receptor AH4AK4_1762 PF11143 Protein of unknown function (DUF2919) AH4AK4_1763 PF01544 CorA-like Mg2+ transporter protein AH4AK4_1765 PF01012 Electron transfer flavoprotein domain AH4AK4_1767 PF01012 Electron transfer flavoprotein domain AH4AK4_1767 PF00766 Electron transfer flavoprotein FAD-binding domain AH4AK4_1768 PF00266 Aminotransferase class-V AH4AK4_1769 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AH4AK4_1770 PF00793 DAHP synthetase I family AH4AK4_1771 PF03741 Integral membrane protein TerC family AH4AK4_1773 PF08891 YfcL protein AH4AK4_1774 PF00501 AMP-binding enzyme AH4AK4_1775 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AH4AK4_1775 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AH4AK4_1776 PF04172 LrgB-like family AH4AK4_1777 PF03788 LrgA family AH4AK4_1780 PF08411 Exonuclease C-terminal AH4AK4_1780 PF00929 Exonuclease AH4AK4_1781 PF00149 Calcineurin-like phosphoesterase AH4AK4_1782 PF00497 Bacterial extracellular solute-binding proteins, family 3 AH4AK4_1783 PF00795 Carbon-nitrogen hydrolase AH4AK4_1784 PF00155 Aminotransferase class I and II AH4AK4_1785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_1785 PF03466 LysR substrate binding domain AH4AK4_1786 PF11762 L-arabinose isomerase C-terminal domain AH4AK4_1786 PF02610 L-arabinose isomerase AH4AK4_1787 PF00596 Class II Aldolase and Adducin N-terminal domain AH4AK4_1788 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AH4AK4_1789 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AH4AK4_1790 PF00005 ABC transporter AH4AK4_1791 PF02653 Branched-chain amino acid transport system / permease component AH4AK4_1792 PF12833 Helix-turn-helix domain AH4AK4_1792 PF02311 AraC-like ligand binding domain AH4AK4_1793 PF00444 Ribosomal protein L36 AH4AK4_1794 PF01197 Ribosomal protein L31 AH4AK4_1797 PF01863 Protein of unknown function DUF45 AH4AK4_1800 PF03606 C4-dicarboxylate anaerobic carrier AH4AK4_1802 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AH4AK4_1802 PF01266 FAD dependent oxidoreductase AH4AK4_1803 PF00109 Beta-ketoacyl synthase, N-terminal domain AH4AK4_1803 PF02801 Beta-ketoacyl synthase, C-terminal domain AH4AK4_1806 PF00285 Citrate synthase, C-terminal domain AH4AK4_1807 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AH4AK4_1808 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AH4AK4_1809 PF00890 FAD binding domain AH4AK4_1809 PF02910 Fumarate reductase flavoprotein C-term AH4AK4_1810 PF13085 2Fe-2S iron-sulfur cluster binding domain AH4AK4_1811 PF02779 Transketolase, pyrimidine binding domain AH4AK4_1811 PF16078 2-oxoglutarate dehydrogenase N-terminus AH4AK4_1811 PF16870 2-oxoglutarate dehydrogenase C-terminal AH4AK4_1811 PF00676 Dehydrogenase E1 component AH4AK4_1812 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AH4AK4_1812 PF00364 Biotin-requiring enzyme AH4AK4_1812 PF02817 e3 binding domain AH4AK4_1813 PF00549 CoA-ligase AH4AK4_1813 PF08442 ATP-grasp domain AH4AK4_1814 PF00549 CoA-ligase AH4AK4_1814 PF02629 CoA binding domain AH4AK4_1815 PF01965 DJ-1/PfpI family AH4AK4_1815 PF12833 Helix-turn-helix domain AH4AK4_1816 PF03692 Putative zinc- or iron-chelating domain AH4AK4_1817 PF01266 FAD dependent oxidoreductase AH4AK4_1818 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_1819 PF00005 ABC transporter AH4AK4_1821 PF07702 UTRA domain AH4AK4_1821 PF00392 Bacterial regulatory proteins, gntR family AH4AK4_1823 PF00266 Aminotransferase class-V AH4AK4_1826 PF02901 Pyruvate formate lyase-like AH4AK4_1826 PF01228 Glycine radical AH4AK4_1827 PF01226 Formate/nitrite transporter AH4AK4_1828 PF18381 YcaO cyclodehydratase C-terminal domain AH4AK4_1828 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AH4AK4_1830 PF00893 Small Multidrug Resistance protein AH4AK4_1831 PF02774 Semialdehyde dehydrogenase, dimerisation domain AH4AK4_1831 PF01118 Semialdehyde dehydrogenase, NAD binding domain AH4AK4_1832 PF00313 'Cold-shock' DNA-binding domain AH4AK4_1833 PF02617 ATP-dependent Clp protease adaptor protein ClpS AH4AK4_1834 PF10431 C-terminal, D2-small domain, of ClpB protein AH4AK4_1834 PF02861 Clp amino terminal domain, pathogenicity island component AH4AK4_1834 PF17871 AAA lid domain AH4AK4_1834 PF00004 ATPase family associated with various cellular activities (AAA) AH4AK4_1834 PF07724 AAA domain (Cdc48 subfamily) AH4AK4_1835 PF01176 Translation initiation factor 1A / IF-1 AH4AK4_1836 PF04377 Arginine-tRNA-protein transferase, C terminus AH4AK4_1836 PF04376 Arginine-tRNA-protein transferase, N terminus AH4AK4_1837 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AH4AK4_1838 PF05433 Glycine zipper 2TM domain AH4AK4_1839 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_1839 PF05230 MASE2 domain AH4AK4_1840 PF07992 Pyridine nucleotide-disulphide oxidoreductase AH4AK4_1841 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AH4AK4_1841 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AH4AK4_1843 PF01037 Lrp/AsnC ligand binding domain AH4AK4_1844 PF01580 FtsK/SpoIIIE family AH4AK4_1844 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AH4AK4_1844 PF09397 Ftsk gamma domain AH4AK4_1844 PF17854 FtsK alpha domain AH4AK4_1845 PF03548 Outer membrane lipoprotein carrier protein LolA AH4AK4_1846 PF12002 MgsA AAA+ ATPase C terminal AH4AK4_1846 PF16193 AAA C-terminal domain AH4AK4_1846 PF00004 ATPase family associated with various cellular activities (AAA) AH4AK4_1848 PF02403 Seryl-tRNA synthetase N-terminal domain AH4AK4_1848 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AH4AK4_1849 PF02674 Colicin V production protein AH4AK4_1850 PF00156 Phosphoribosyl transferase domain AH4AK4_1851 PF00232 Glycosyl hydrolase family 1 AH4AK4_1852 PF00367 phosphotransferase system, EIIB AH4AK4_1852 PF02378 Phosphotransferase system, EIIC AH4AK4_1853 PF00356 Bacterial regulatory proteins, lacI family AH4AK4_1854 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AH4AK4_1855 PF00005 ABC transporter AH4AK4_1857 PF00005 ABC transporter AH4AK4_1857 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AH4AK4_1859 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_1859 PF12911 N-terminal TM domain of oligopeptide transport permease C AH4AK4_1860 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_1861 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AH4AK4_1862 PF00158 Sigma-54 interaction domain AH4AK4_1862 PF02954 Bacterial regulatory protein, Fis family AH4AK4_1863 PF04012 PspA/IM30 family AH4AK4_1864 PF06667 Phage shock protein B AH4AK4_1866 PF04317 YcjX-like family, DUF463 AH4AK4_1867 PF05128 Domain of unknown function (DUF697) AH4AK4_1868 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AH4AK4_1869 PF01329 Pterin 4 alpha carbinolamine dehydratase AH4AK4_1870 PF00158 Sigma-54 interaction domain AH4AK4_1870 PF18024 Helix-turn-helix domain AH4AK4_1871 PF13689 YfiR/HmsC-like AH4AK4_1872 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_1872 PF17152 Periplasmic sensor domain AH4AK4_1873 PF00691 OmpA family AH4AK4_1874 PF04055 Radical SAM superfamily AH4AK4_1875 PF02601 Exonuclease VII, large subunit AH4AK4_1875 PF13742 OB-fold nucleic acid binding domain AH4AK4_1877 PF02472 Biopolymer transport protein ExbD/TolR AH4AK4_1878 PF01618 MotA/TolQ/ExbB proton channel family AH4AK4_1880 PF01373 Glycosyl hydrolase family 14 AH4AK4_1880 PF03423 Carbohydrate binding domain (family 25) AH4AK4_1880 PF00128 Alpha amylase, catalytic domain AH4AK4_1883 PF00478 IMP dehydrogenase / GMP reductase domain AH4AK4_1883 PF00571 CBS domain AH4AK4_1884 PF00958 GMP synthase C terminal domain AH4AK4_1884 PF00117 Glutamine amidotransferase class-I AH4AK4_1884 PF02540 NAD synthase AH4AK4_1887 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AH4AK4_1887 PF12833 Helix-turn-helix domain AH4AK4_1887 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AH4AK4_1887 PF02805 Metal binding domain of Ada AH4AK4_1890 PF05724 Thiopurine S-methyltransferase (TPMT) AH4AK4_1891 PF16187 Middle or third domain of peptidase_M16 AH4AK4_1891 PF05193 Peptidase M16 inactive domain AH4AK4_1891 PF00675 Insulinase (Peptidase family M16) AH4AK4_1892 PF00300 Histidine phosphatase superfamily (branch 1) AH4AK4_1894 PF00892 EamA-like transporter family AH4AK4_1895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AH4AK4_1896 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AH4AK4_1897 PF02559 CarD-like/TRCF domain AH4AK4_1897 PF00270 DEAD/DEAH box helicase AH4AK4_1897 PF17757 UvrB interaction domain AH4AK4_1897 PF00271 Helicase conserved C-terminal domain AH4AK4_1897 PF03461 TRCF domain AH4AK4_1899 PF02687 FtsX-like permease family AH4AK4_1899 PF12704 MacB-like periplasmic core domain AH4AK4_1900 PF00005 ABC transporter AH4AK4_1901 PF02687 FtsX-like permease family AH4AK4_1901 PF12704 MacB-like periplasmic core domain AH4AK4_1905 PF05697 Bacterial trigger factor protein (TF) AH4AK4_1905 PF05698 Bacterial trigger factor protein (TF) C-terminus AH4AK4_1905 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AH4AK4_1906 PF00574 Clp protease AH4AK4_1907 PF10431 C-terminal, D2-small domain, of ClpB protein AH4AK4_1907 PF07724 AAA domain (Cdc48 subfamily) AH4AK4_1907 PF06689 ClpX C4-type zinc finger AH4AK4_1908 PF05362 Lon protease (S16) C-terminal proteolytic domain AH4AK4_1908 PF00004 ATPase family associated with various cellular activities (AAA) AH4AK4_1908 PF02190 ATP-dependent protease La (LON) substrate-binding domain AH4AK4_1909 PF00216 Bacterial DNA-binding protein AH4AK4_1910 PF13145 PPIC-type PPIASE domain AH4AK4_1911 PF12848 ABC transporter AH4AK4_1911 PF00005 ABC transporter AH4AK4_1912 PF00474 Sodium:solute symporter family AH4AK4_1913 PF04341 Protein of unknown function, DUF485 AH4AK4_1916 PF00378 Enoyl-CoA hydratase/isomerase AH4AK4_1917 PF01235 Sodium:alanine symporter family AH4AK4_1919 PF06167 Glucose-regulated metallo-peptidase M90 AH4AK4_1920 PF01184 GPR1/FUN34/yaaH family AH4AK4_1922 PF09278 MerR, DNA binding AH4AK4_1922 PF00376 MerR family regulatory protein AH4AK4_1923 PF00682 HMGL-like AH4AK4_1924 PF00364 Biotin-requiring enzyme AH4AK4_1924 PF00289 Biotin carboxylase, N-terminal domain AH4AK4_1924 PF02785 Biotin carboxylase C-terminal domain AH4AK4_1924 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AH4AK4_1925 PF00378 Enoyl-CoA hydratase/isomerase AH4AK4_1926 PF01039 Carboxyl transferase domain AH4AK4_1927 PF02770 Acyl-CoA dehydrogenase, middle domain AH4AK4_1927 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AH4AK4_1927 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AH4AK4_1928 PF00171 Aldehyde dehydrogenase family AH4AK4_1929 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AH4AK4_1929 PF02770 Acyl-CoA dehydrogenase, middle domain AH4AK4_1929 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AH4AK4_1930 PF00378 Enoyl-CoA hydratase/isomerase AH4AK4_1931 PF00378 Enoyl-CoA hydratase/isomerase AH4AK4_1932 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AH4AK4_1932 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AH4AK4_1934 PF13520 Amino acid permease AH4AK4_1935 PF01925 Sulfite exporter TauE/SafE AH4AK4_1937 PF03180 NLPA lipoprotein AH4AK4_1939 PF02653 Branched-chain amino acid transport system / permease component AH4AK4_1940 PF02653 Branched-chain amino acid transport system / permease component AH4AK4_1941 PF00005 ABC transporter AH4AK4_1942 PF13407 Periplasmic binding protein domain AH4AK4_1943 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_1943 PF03466 LysR substrate binding domain AH4AK4_1946 PF02634 FdhD/NarQ family AH4AK4_1947 PF00384 Molybdopterin oxidoreductase AH4AK4_1950 PF17158 Membrane-associated sensor, integral membrane domain AH4AK4_1950 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_1951 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_1951 PF03466 LysR substrate binding domain AH4AK4_1953 PF00232 Glycosyl hydrolase family 1 AH4AK4_1955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_1955 PF03466 LysR substrate binding domain AH4AK4_1957 PF00933 Glycosyl hydrolase family 3 N terminal domain AH4AK4_1959 PF01261 Xylose isomerase-like TIM barrel AH4AK4_1960 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AH4AK4_1960 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AH4AK4_1961 PF03466 LysR substrate binding domain AH4AK4_1961 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_1963 PF03279 Bacterial lipid A biosynthesis acyltransferase AH4AK4_1965 PF03279 Bacterial lipid A biosynthesis acyltransferase AH4AK4_1967 PF05726 Pirin C-terminal cupin domain AH4AK4_1967 PF02678 Pirin AH4AK4_1970 PF03104 DNA polymerase family B, exonuclease domain AH4AK4_1970 PF00136 DNA polymerase family B AH4AK4_1976 PF01554 MatE AH4AK4_1977 PF06786 Uncharacterised protein family (UPF0253) AH4AK4_1978 PF00677 Lumazine binding domain AH4AK4_1980 PF13419 Haloacid dehalogenase-like hydrolase AH4AK4_1981 PF02222 ATP-grasp domain AH4AK4_1982 PF00892 EamA-like transporter family AH4AK4_1983 PF02525 Flavodoxin-like fold AH4AK4_1988 PF13509 S1 domain AH4AK4_1988 PF17783 CvfB-like winged helix domain AH4AK4_1990 PF04269 Protein of unknown function, DUF440 AH4AK4_1991 PF00912 Transglycosylase AH4AK4_1992 PF04269 Protein of unknown function, DUF440 AH4AK4_1993 PF03776 Septum formation topological specificity factor MinE AH4AK4_1994 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AH4AK4_1995 PF05209 Septum formation inhibitor MinC, N-terminal domain AH4AK4_1995 PF03775 Septum formation inhibitor MinC, C-terminal domain AH4AK4_1996 PF05166 YcgL domain AH4AK4_1997 PF13406 Transglycosylase SLT domain AH4AK4_1998 PF03315 Serine dehydratase beta chain AH4AK4_1998 PF03313 Serine dehydratase alpha chain AH4AK4_1999 PF03313 Serine dehydratase alpha chain AH4AK4_1999 PF03315 Serine dehydratase beta chain AH4AK4_2001 PF06865 Pyrimidine/purine nucleoside phosphorylase AH4AK4_2002 PF00375 Sodium:dicarboxylate symporter family AH4AK4_2003 PF09278 MerR, DNA binding AH4AK4_2003 PF00376 MerR family regulatory protein AH4AK4_2004 PF02803 Thiolase, C-terminal domain AH4AK4_2004 PF00108 Thiolase, N-terminal domain AH4AK4_2005 PF08668 HDOD domain AH4AK4_2005 PF00563 EAL domain AH4AK4_2006 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AH4AK4_2007 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AH4AK4_2010 PF08281 Sigma-70, region 4 AH4AK4_2010 PF04542 Sigma-70 region 2 AH4AK4_2012 PF13519 von Willebrand factor type A domain AH4AK4_2012 PF07584 Aerotolerance regulator N-terminal AH4AK4_2013 PF13519 von Willebrand factor type A domain AH4AK4_2013 PF17863 AAA lid domain AH4AK4_2013 PF07728 AAA domain (dynein-related subfamily) AH4AK4_2015 PF01882 Protein of unknown function DUF58 AH4AK4_2017 PF17863 AAA lid domain AH4AK4_2017 PF07726 ATPase family associated with various cellular activities (AAA) AH4AK4_2018 PF00108 Thiolase, N-terminal domain AH4AK4_2018 PF02803 Thiolase, C-terminal domain AH4AK4_2019 PF00378 Enoyl-CoA hydratase/isomerase AH4AK4_2019 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AH4AK4_2019 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AH4AK4_2021 PF07152 YaeQ protein AH4AK4_2022 PF00561 alpha/beta hydrolase fold AH4AK4_2024 PF07690 Major Facilitator Superfamily AH4AK4_2025 PF00005 ABC transporter AH4AK4_2026 PF01032 FecCD transport family AH4AK4_2030 PF00873 AcrB/AcrD/AcrF family AH4AK4_2031 PF13533 Biotin-lipoyl like AH4AK4_2033 PF00486 Transcriptional regulatory protein, C terminal AH4AK4_2034 PF05433 Glycine zipper 2TM domain AH4AK4_2036 PF00501 AMP-binding enzyme AH4AK4_2036 PF13193 AMP-binding enzyme C-terminal domain AH4AK4_2039 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AH4AK4_2039 PF01502 Phosphoribosyl-AMP cyclohydrolase AH4AK4_2040 PF00977 Histidine biosynthesis protein AH4AK4_2041 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_2041 PF00072 Response regulator receiver domain AH4AK4_2041 PF01627 Hpt domain AH4AK4_2041 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_2043 PF00072 Response regulator receiver domain AH4AK4_2044 PF00977 Histidine biosynthesis protein AH4AK4_2045 PF00117 Glutamine amidotransferase class-I AH4AK4_2046 PF08645 Polynucleotide kinase 3 phosphatase AH4AK4_2046 PF00475 Imidazoleglycerol-phosphate dehydratase AH4AK4_2047 PF00155 Aminotransferase class I and II AH4AK4_2048 PF00815 Histidinol dehydrogenase AH4AK4_2049 PF08029 HisG, C-terminal domain AH4AK4_2049 PF01634 ATP phosphoribosyltransferase AH4AK4_2051 PF13307 Helicase C-terminal domain AH4AK4_2051 PF04851 Type III restriction enzyme, res subunit AH4AK4_2052 PF00814 Glycoprotease family AH4AK4_2054 PF00561 alpha/beta hydrolase fold AH4AK4_2055 PF00501 AMP-binding enzyme AH4AK4_2055 PF13193 AMP-binding enzyme C-terminal domain AH4AK4_2056 PF01612 3'-5' exonuclease AH4AK4_2056 PF00570 HRDC domain AH4AK4_2058 PF00892 EamA-like transporter family AH4AK4_2060 PF01207 Dihydrouridine synthase (Dus) AH4AK4_2061 PF04304 Protein of unknown function (DUF454) AH4AK4_2062 PF00156 Phosphoribosyl transferase domain AH4AK4_2064 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AH4AK4_2064 PF12170 DNA polymerase III tau subunit V interacting with alpha AH4AK4_2064 PF12169 DNA polymerase III subunits gamma and tau domain III AH4AK4_2065 PF02575 YbaB/EbfC DNA-binding family AH4AK4_2066 PF00857 Isochorismatase family AH4AK4_2067 PF02678 Pirin AH4AK4_2067 PF05726 Pirin C-terminal cupin domain AH4AK4_2068 PF03466 LysR substrate binding domain AH4AK4_2068 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_2070 PF00072 Response regulator receiver domain AH4AK4_2070 PF00196 Bacterial regulatory proteins, luxR family AH4AK4_2072 PF04408 Helicase associated domain (HA2) AH4AK4_2072 PF00271 Helicase conserved C-terminal domain AH4AK4_2072 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AH4AK4_2072 PF11898 Domain of unknown function (DUF3418) AH4AK4_2072 PF00270 DEAD/DEAH box helicase AH4AK4_2074 PF01386 Ribosomal L25p family AH4AK4_2075 PF00672 HAMP domain AH4AK4_2075 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_2075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_2075 PF01627 Hpt domain AH4AK4_2075 PF00072 Response regulator receiver domain AH4AK4_2075 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AH4AK4_2076 PF00072 Response regulator receiver domain AH4AK4_2077 PF00753 Metallo-beta-lactamase superfamily AH4AK4_2079 PF02769 AIR synthase related protein, C-terminal domain AH4AK4_2079 PF00586 AIR synthase related protein, N-terminal domain AH4AK4_2082 PF10672 S-adenosylmethionine-dependent methyltransferase AH4AK4_2082 PF17785 PUA-like domain AH4AK4_2083 PF00672 HAMP domain AH4AK4_2083 PF12729 Four helix bundle sensory module for signal transduction AH4AK4_2083 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_2084 PF00708 Acylphosphatase AH4AK4_2086 PF08264 Anticodon-binding domain of tRNA AH4AK4_2086 PF09334 tRNA synthetases class I (M) AH4AK4_2086 PF01588 Putative tRNA binding domain AH4AK4_2087 PF10609 NUBPL iron-transfer P-loop NTPase AH4AK4_2088 PF00485 Phosphoribulokinase / Uridine kinase family AH4AK4_2089 PF00692 dUTPase AH4AK4_2090 PF01384 Phosphate transporter family AH4AK4_2091 PF12111 Polyribonucleotide phosphorylase C terminal AH4AK4_2091 PF10150 Ribonuclease E/G family AH4AK4_2091 PF00575 S1 RNA binding domain AH4AK4_2092 PF00849 RNA pseudouridylate synthase AH4AK4_2092 PF01479 S4 domain AH4AK4_2093 PF02545 Maf-like protein AH4AK4_2095 PF02620 Large ribosomal RNA subunit accumulation protein YceD AH4AK4_2096 PF01783 Ribosomal L32p protein family AH4AK4_2097 PF02504 Fatty acid synthesis protein AH4AK4_2098 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AH4AK4_2098 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AH4AK4_2099 PF00698 Acyl transferase domain AH4AK4_2101 PF00550 Phosphopantetheine attachment site AH4AK4_2102 PF02801 Beta-ketoacyl synthase, C-terminal domain AH4AK4_2102 PF00109 Beta-ketoacyl synthase, N-terminal domain AH4AK4_2103 PF01063 Amino-transferase class IV AH4AK4_2104 PF02618 YceG-like family AH4AK4_2105 PF02223 Thymidylate kinase AH4AK4_2106 PF09115 DNA polymerase III, delta subunit, C terminal AH4AK4_2107 PF01026 TatD related DNase AH4AK4_2108 PF00589 Phage integrase family AH4AK4_2110 PF01189 16S rRNA methyltransferase RsmB/F AH4AK4_2110 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AH4AK4_2110 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AH4AK4_2111 PF02470 MlaD protein AH4AK4_2112 PF04403 Paraquat-inducible protein A AH4AK4_2114 PF07130 YebG protein AH4AK4_2116 PF05362 Lon protease (S16) C-terminal proteolytic domain AH4AK4_2116 PF13654 AAA domain AH4AK4_2117 PF07977 FabA-like domain AH4AK4_2118 PF04957 Ribosome modulation factor AH4AK4_2122 PF01170 Putative RNA methylase family UPF0020 AH4AK4_2122 PF02926 THUMP domain AH4AK4_2122 PF10672 S-adenosylmethionine-dependent methyltransferase AH4AK4_2123 PF07126 Cell-division protein ZapC AH4AK4_2124 PF01180 Dihydroorotate dehydrogenase AH4AK4_2125 PF05088 Bacterial NAD-glutamate dehydrogenase AH4AK4_2127 PF01433 Peptidase family M1 domain AH4AK4_2127 PF11940 Domain of unknown function (DUF3458) Ig-like fold AH4AK4_2127 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AH4AK4_2129 PF11818 C-terminal domain of tail specific protease (DUF3340) AH4AK4_2129 PF00595 PDZ domain AH4AK4_2129 PF03572 Peptidase family S41 AH4AK4_2129 PF17804 Tail specific protease N-terminal domain AH4AK4_2130 PF17516 ProQ C-terminal domain AH4AK4_2130 PF04352 ProQ/FINO family AH4AK4_2131 PF13185 GAF domain AH4AK4_2133 PF00115 Cytochrome C and Quinol oxidase polypeptide I AH4AK4_2136 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AH4AK4_2136 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AH4AK4_2138 PF00403 Heavy-metal-associated domain AH4AK4_2141 PF13545 Crp-like helix-turn-helix domain AH4AK4_2141 PF00027 Cyclic nucleotide-binding domain AH4AK4_2142 PF00582 Universal stress protein family AH4AK4_2143 PF01171 PP-loop family AH4AK4_2146 PF13417 Glutathione S-transferase, N-terminal domain AH4AK4_2147 PF05025 RbsD / FucU transport protein family AH4AK4_2148 PF00005 ABC transporter AH4AK4_2149 PF02653 Branched-chain amino acid transport system / permease component AH4AK4_2150 PF13407 Periplasmic binding protein domain AH4AK4_2151 PF00294 pfkB family carbohydrate kinase AH4AK4_2152 PF00356 Bacterial regulatory proteins, lacI family AH4AK4_2153 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_2153 PF00563 EAL domain AH4AK4_2153 PF03707 Bacterial signalling protein N terminal repeat AH4AK4_2155 PF02146 Sir2 family AH4AK4_2158 PF00072 Response regulator receiver domain AH4AK4_2158 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_2158 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_2158 PF09456 RcsC Alpha-Beta-Loop (ABL) AH4AK4_2159 PF00216 Bacterial DNA-binding protein AH4AK4_2160 PF03483 B3/4 domain AH4AK4_2160 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AH4AK4_2160 PF01588 Putative tRNA binding domain AH4AK4_2160 PF03147 Ferredoxin-fold anticodon binding domain AH4AK4_2160 PF03484 tRNA synthetase B5 domain AH4AK4_2161 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AH4AK4_2161 PF01409 tRNA synthetases class II core domain (F) AH4AK4_2162 PF00453 Ribosomal protein L20 AH4AK4_2163 PF00707 Translation initiation factor IF-3, C-terminal domain AH4AK4_2163 PF05198 Translation initiation factor IF-3, N-terminal domain AH4AK4_2164 PF03129 Anticodon binding domain AH4AK4_2164 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AH4AK4_2164 PF02824 TGS domain AH4AK4_2164 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AH4AK4_2167 PF04055 Radical SAM superfamily AH4AK4_2170 PF03989 DNA gyrase C-terminal domain, beta-propeller AH4AK4_2170 PF00521 DNA gyrase/topoisomerase IV, subunit A AH4AK4_2172 PF13419 Haloacid dehalogenase-like hydrolase AH4AK4_2173 PF00317 Ribonucleotide reductase, all-alpha domain AH4AK4_2173 PF02867 Ribonucleotide reductase, barrel domain AH4AK4_2173 PF03477 ATP cone domain AH4AK4_2174 PF00268 Ribonucleotide reductase, small chain AH4AK4_2175 PF00111 2Fe-2S iron-sulfur cluster binding domain AH4AK4_2176 PF03562 MltA specific insert domain AH4AK4_2176 PF06725 3D domain AH4AK4_2177 PF06945 Protein of unknown function (DUF1289) AH4AK4_2178 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AH4AK4_2178 PF02378 Phosphotransferase system, EIIC AH4AK4_2179 PF00294 pfkB family carbohydrate kinase AH4AK4_2180 PF00381 PTS HPr component phosphorylation site AH4AK4_2180 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AH4AK4_2181 PF00356 Bacterial regulatory proteins, lacI family AH4AK4_2181 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AH4AK4_2182 PF03222 Tryptophan/tyrosine permease family AH4AK4_2189 PF01124 MAPEG family AH4AK4_2190 PF00271 Helicase conserved C-terminal domain AH4AK4_2190 PF00270 DEAD/DEAH box helicase AH4AK4_2192 PF01264 Chorismate synthase AH4AK4_2193 PF05175 Methyltransferase small domain AH4AK4_2194 PF01713 Smr domain AH4AK4_2199 PF08329 Chitinase A, N-terminal domain AH4AK4_2199 PF00704 Glycosyl hydrolases family 18 AH4AK4_2201 PF08274 PhnA Zinc-Ribbon AH4AK4_2201 PF03831 PhnA domain AH4AK4_2203 PF01810 LysE type translocator AH4AK4_2204 PF02567 Phenazine biosynthesis-like protein AH4AK4_2212 PF05036 Sporulation related domain AH4AK4_2212 PF03330 Lytic transglycolase AH4AK4_2213 PF16330 MukB hinge domain AH4AK4_2213 PF04310 MukB N-terminal AH4AK4_2214 PF04288 MukE-like family AH4AK4_2215 PF03882 MukF winged-helix domain AH4AK4_2215 PF17193 MukF C-terminal domain AH4AK4_2215 PF17192 MukF middle domain AH4AK4_2217 PF02698 DUF218 domain AH4AK4_2218 PF00121 Triosephosphate isomerase AH4AK4_2219 PF00365 Phosphofructokinase AH4AK4_2221 PF07687 Peptidase dimerisation domain AH4AK4_2221 PF01546 Peptidase family M20/M25/M40 AH4AK4_2222 PF13419 Haloacid dehalogenase-like hydrolase AH4AK4_2223 PF02789 Cytosol aminopeptidase family, N-terminal domain AH4AK4_2223 PF00883 Cytosol aminopeptidase family, catalytic domain AH4AK4_2228 PF11398 Protein of unknown function (DUF2813) AH4AK4_2230 PF12833 Helix-turn-helix domain AH4AK4_2230 PF02311 AraC-like ligand binding domain AH4AK4_2232 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_2232 PF03466 LysR substrate binding domain AH4AK4_2233 PF01925 Sulfite exporter TauE/SafE AH4AK4_2235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AH4AK4_2235 PF18029 Glyoxalase-like domain AH4AK4_2236 PF01820 D-ala D-ala ligase N-terminus AH4AK4_2236 PF07478 D-ala D-ala ligase C-terminus AH4AK4_2238 PF00255 Glutathione peroxidase AH4AK4_2239 PF00270 DEAD/DEAH box helicase AH4AK4_2239 PF00271 Helicase conserved C-terminal domain AH4AK4_2240 PF13673 Acetyltransferase (GNAT) domain AH4AK4_2242 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AH4AK4_2244 PF01928 CYTH domain AH4AK4_2245 PF00293 NUDIX domain AH4AK4_2246 PF13673 Acetyltransferase (GNAT) domain AH4AK4_2247 PF03992 Antibiotic biosynthesis monooxygenase AH4AK4_2248 PF08543 Phosphomethylpyrimidine kinase AH4AK4_2252 PF00561 alpha/beta hydrolase fold AH4AK4_2252 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AH4AK4_2253 PF01575 MaoC like domain AH4AK4_2257 PF00005 ABC transporter AH4AK4_2257 PF00664 ABC transporter transmembrane region AH4AK4_2258 PF00005 ABC transporter AH4AK4_2258 PF00664 ABC transporter transmembrane region AH4AK4_2259 PF00072 Response regulator receiver domain AH4AK4_2259 PF01627 Hpt domain AH4AK4_2259 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_2259 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_2259 PF00672 HAMP domain AH4AK4_2259 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AH4AK4_2260 PF00085 Thioredoxin AH4AK4_2261 PF00939 Sodium:sulfate symporter transmembrane region AH4AK4_2263 PF00343 Carbohydrate phosphorylase AH4AK4_2271 PF00425 chorismate binding enzyme AH4AK4_2271 PF04715 Anthranilate synthase component I, N terminal region AH4AK4_2272 PF00293 NUDIX domain AH4AK4_2273 PF03222 Tryptophan/tyrosine permease family AH4AK4_2274 PF00375 Sodium:dicarboxylate symporter family AH4AK4_2275 PF00270 DEAD/DEAH box helicase AH4AK4_2275 PF00271 Helicase conserved C-terminal domain AH4AK4_2275 PF00570 HRDC domain AH4AK4_2275 PF09382 RQC domain AH4AK4_2275 PF16124 RecQ zinc-binding AH4AK4_2276 PF08298 PrkA AAA domain AH4AK4_2276 PF06798 PrkA serine protein kinase C-terminal domain AH4AK4_2277 PF04285 Protein of unknown function (DUF444) AH4AK4_2278 PF04293 SpoVR like protein AH4AK4_2279 PF07840 FadR C-terminal domain AH4AK4_2279 PF00392 Bacterial regulatory proteins, gntR family AH4AK4_2280 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AH4AK4_2281 PF02600 Disulfide bond formation protein DsbB AH4AK4_2282 PF09335 SNARE associated Golgi protein AH4AK4_2284 PF17757 UvrB interaction domain AH4AK4_2284 PF12344 Ultra-violet resistance protein B AH4AK4_2284 PF00271 Helicase conserved C-terminal domain AH4AK4_2284 PF04851 Type III restriction enzyme, res subunit AH4AK4_2284 PF02151 UvrB/uvrC motif AH4AK4_2286 PF02080 TrkA-C domain AH4AK4_2286 PF06826 Predicted Permease Membrane Region AH4AK4_2287 PF10145 Phage-related minor tail protein AH4AK4_2287 PF01551 Peptidase family M23 AH4AK4_2287 PF01464 Transglycosylase SLT domain AH4AK4_2290 PF01970 Tripartite tricarboxylate transporter TctA family AH4AK4_2291 PF00072 Response regulator receiver domain AH4AK4_2292 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AH4AK4_2292 PF00989 PAS fold AH4AK4_2292 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_2292 PF17203 Single cache domain 3 AH4AK4_2293 PF00480 ROK family AH4AK4_2293 PF01047 MarR family AH4AK4_2294 PF17200 Single Cache domain 2 AH4AK4_2294 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_2294 PF00672 HAMP domain AH4AK4_2295 PF02810 SEC-C motif AH4AK4_2296 PF04324 BFD-like [2Fe-2S] binding domain AH4AK4_2296 PF01266 FAD dependent oxidoreductase AH4AK4_2297 PF00890 FAD binding domain AH4AK4_2298 PF13183 4Fe-4S dicluster domain AH4AK4_2298 PF02754 Cysteine-rich domain AH4AK4_2300 PF02335 Cytochrome c552 AH4AK4_2301 PF13435 Cytochrome c554 and c-prime AH4AK4_2301 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) AH4AK4_2302 PF13247 4Fe-4S dicluster domain AH4AK4_2302 PF00037 4Fe-4S binding domain AH4AK4_2303 PF03916 Polysulphide reductase, NrfD AH4AK4_2304 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AH4AK4_2304 PF01578 Cytochrome C assembly protein AH4AK4_2305 PF08534 Redoxin AH4AK4_2306 PF03918 Cytochrome C biogenesis protein AH4AK4_2307 PF00293 NUDIX domain AH4AK4_2308 PF00768 D-alanyl-D-alanine carboxypeptidase AH4AK4_2309 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AH4AK4_2310 PF01266 FAD dependent oxidoreductase AH4AK4_2312 PF07969 Amidohydrolase family AH4AK4_2313 PF00571 CBS domain AH4AK4_2313 PF00478 IMP dehydrogenase / GMP reductase domain AH4AK4_2315 PF01717 Cobalamin-independent synthase, Catalytic domain AH4AK4_2315 PF08267 Cobalamin-independent synthase, N-terminal domain AH4AK4_2316 PF03466 LysR substrate binding domain AH4AK4_2316 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_2318 PF00593 TonB dependent receptor AH4AK4_2318 PF07715 TonB-dependent Receptor Plug Domain AH4AK4_2320 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_2321 PF02311 AraC-like ligand binding domain AH4AK4_2321 PF12833 Helix-turn-helix domain AH4AK4_2322 PF00106 short chain dehydrogenase AH4AK4_2323 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_2323 PF03466 LysR substrate binding domain AH4AK4_2324 PF13460 NAD(P)H-binding AH4AK4_2326 PF01053 Cys/Met metabolism PLP-dependent enzyme AH4AK4_2327 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AH4AK4_2327 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AH4AK4_2331 PF00141 Peroxidase AH4AK4_2333 PF10722 Putative bacterial sensory transduction regulator AH4AK4_2335 PF00265 Thymidine kinase AH4AK4_2336 PF03553 Na+/H+ antiporter family AH4AK4_2337 PF00816 H-NS histone family AH4AK4_2338 PF01923 Cobalamin adenosyltransferase AH4AK4_2339 PF12843 Putative quorum-sensing-regulated virulence factor AH4AK4_2340 PF04055 Radical SAM superfamily AH4AK4_2341 PF06508 Queuosine biosynthesis protein QueC AH4AK4_2344 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AH4AK4_2345 PF18073 Rubredoxin metal binding domain AH4AK4_2347 PF00216 Bacterial DNA-binding protein AH4AK4_2348 PF00575 S1 RNA binding domain AH4AK4_2349 PF02224 Cytidylate kinase AH4AK4_2350 PF00925 GTP cyclohydrolase II AH4AK4_2351 PF03466 LysR substrate binding domain AH4AK4_2351 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_2352 PF07690 Major Facilitator Superfamily AH4AK4_2355 PF00881 Nitroreductase family AH4AK4_2356 PF03806 AbgT putative transporter family AH4AK4_2357 PF00563 EAL domain AH4AK4_2357 PF13188 PAS domain AH4AK4_2357 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_2357 PF03707 Bacterial signalling protein N terminal repeat AH4AK4_2359 PF03466 LysR substrate binding domain AH4AK4_2359 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_2360 PF00072 Response regulator receiver domain AH4AK4_2360 PF00486 Transcriptional regulatory protein, C terminal AH4AK4_2362 PF01212 Beta-eliminating lyase AH4AK4_2365 PF00248 Aldo/keto reductase family AH4AK4_2366 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AH4AK4_2368 PF03411 Penicillin-insensitive murein endopeptidase AH4AK4_2371 PF04536 TPM domain AH4AK4_2374 PF01618 MotA/TolQ/ExbB proton channel family AH4AK4_2375 PF13677 Membrane MotB of proton-channel complex MotA/MotB AH4AK4_2375 PF00691 OmpA family AH4AK4_2376 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AH4AK4_2377 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AH4AK4_2378 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AH4AK4_2378 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AH4AK4_2380 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AH4AK4_2380 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AH4AK4_2381 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AH4AK4_2381 PF00384 Molybdopterin oxidoreductase AH4AK4_2381 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AH4AK4_2382 PF00146 NADH dehydrogenase AH4AK4_2383 PF12838 4Fe-4S dicluster domain AH4AK4_2384 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AH4AK4_2385 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AH4AK4_2386 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AH4AK4_2386 PF00361 Proton-conducting membrane transporter AH4AK4_2387 PF00361 Proton-conducting membrane transporter AH4AK4_2388 PF00361 Proton-conducting membrane transporter AH4AK4_2390 PF02769 AIR synthase related protein, C-terminal domain AH4AK4_2390 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AH4AK4_2390 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AH4AK4_2392 PF00497 Bacterial extracellular solute-binding proteins, family 3 AH4AK4_2392 PF01464 Transglycosylase SLT domain AH4AK4_2394 PF07191 zinc-ribbons AH4AK4_2395 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AH4AK4_2395 PF01926 50S ribosome-binding GTPase AH4AK4_2396 PF13360 PQQ-like domain AH4AK4_2397 PF09976 Tetratricopeptide repeat-like domain AH4AK4_2398 PF13393 Histidyl-tRNA synthetase AH4AK4_2398 PF03129 Anticodon binding domain AH4AK4_2399 PF04551 GcpE protein AH4AK4_2400 PF13464 Domain of unknown function (DUF4115) AH4AK4_2402 PF04055 Radical SAM superfamily AH4AK4_2403 PF00334 Nucleoside diphosphate kinase AH4AK4_2404 PF12404 Peptidase AH4AK4_2404 PF00883 Cytosol aminopeptidase family, catalytic domain AH4AK4_2405 PF12404 Peptidase AH4AK4_2405 PF00883 Cytosol aminopeptidase family, catalytic domain AH4AK4_2406 PF00111 2Fe-2S iron-sulfur cluster binding domain AH4AK4_2407 PF00012 Hsp70 protein AH4AK4_2408 PF00226 DnaJ domain AH4AK4_2408 PF07743 HSCB C-terminal oligomerisation domain AH4AK4_2409 PF01521 Iron-sulphur cluster biosynthesis AH4AK4_2410 PF01592 NifU-like N terminal domain AH4AK4_2411 PF00266 Aminotransferase class-V AH4AK4_2412 PF02082 Transcriptional regulator AH4AK4_2413 PF00588 SpoU rRNA Methylase family AH4AK4_2418 PF13181 Tetratricopeptide repeat AH4AK4_2418 PF07719 Tetratricopeptide repeat AH4AK4_2419 PF00581 Rhodanese-like domain AH4AK4_2420 PF07549 SecD/SecF GG Motif AH4AK4_2420 PF02355 Protein export membrane protein AH4AK4_2421 PF13721 SecD export protein N-terminal TM region AH4AK4_2421 PF02355 Protein export membrane protein AH4AK4_2421 PF07549 SecD/SecF GG Motif AH4AK4_2422 PF02699 Preprotein translocase subunit AH4AK4_2423 PF01702 Queuine tRNA-ribosyltransferase AH4AK4_2424 PF02547 Queuosine biosynthesis protein AH4AK4_2425 PF00571 CBS domain AH4AK4_2426 PF10417 C-terminal domain of 1-Cys peroxiredoxin AH4AK4_2426 PF00578 AhpC/TSA family AH4AK4_2427 PF07992 Pyridine nucleotide-disulphide oxidoreductase AH4AK4_2427 PF13192 Thioredoxin domain AH4AK4_2428 PF07690 Major Facilitator Superfamily AH4AK4_2430 PF08241 Methyltransferase domain AH4AK4_2432 PF01037 Lrp/AsnC ligand binding domain AH4AK4_2433 PF01810 LysE type translocator AH4AK4_2434 PF02548 Ketopantoate hydroxymethyltransferase AH4AK4_2435 PF02347 Glycine cleavage system P-protein AH4AK4_2437 PF01597 Glycine cleavage H-protein AH4AK4_2438 PF01571 Aminomethyltransferase folate-binding domain AH4AK4_2438 PF08669 Glycine cleavage T-protein C-terminal barrel domain AH4AK4_2439 PF01494 FAD binding domain AH4AK4_2440 PF01494 FAD binding domain AH4AK4_2441 PF03695 Uncharacterised protein family (UPF0149) AH4AK4_2442 PF05164 Cell division protein ZapA AH4AK4_2443 PF00356 Bacterial regulatory proteins, lacI family AH4AK4_2444 PF00005 ABC transporter AH4AK4_2445 PF02653 Branched-chain amino acid transport system / permease component AH4AK4_2446 PF13407 Periplasmic binding protein domain AH4AK4_2448 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AH4AK4_2448 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AH4AK4_2449 PF07690 Major Facilitator Superfamily AH4AK4_2450 PF00005 ABC transporter AH4AK4_2450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AH4AK4_2451 PF12911 N-terminal TM domain of oligopeptide transport permease C AH4AK4_2451 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_2452 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_2454 PF00043 Glutathione S-transferase, C-terminal domain AH4AK4_2454 PF02798 Glutathione S-transferase, N-terminal domain AH4AK4_2455 PF13417 Glutathione S-transferase, N-terminal domain AH4AK4_2457 PF00459 Inositol monophosphatase family AH4AK4_2458 PF18393 MotY N-terminal domain AH4AK4_2458 PF00691 OmpA family AH4AK4_2459 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_2459 PF00672 HAMP domain AH4AK4_2459 PF12729 Four helix bundle sensory module for signal transduction AH4AK4_2461 PF00929 Exonuclease AH4AK4_2462 PF13726 Na+-H+ antiporter family AH4AK4_2462 PF03553 Na+/H+ antiporter family AH4AK4_2463 PF07690 Major Facilitator Superfamily AH4AK4_2464 PF03466 LysR substrate binding domain AH4AK4_2464 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_2466 PF00271 Helicase conserved C-terminal domain AH4AK4_2466 PF00270 DEAD/DEAH box helicase AH4AK4_2466 PF03880 DbpA RNA binding domain AH4AK4_2467 PF03061 Thioesterase superfamily AH4AK4_2469 PF02913 FAD linked oxidases, C-terminal domain AH4AK4_2469 PF13183 4Fe-4S dicluster domain AH4AK4_2469 PF01565 FAD binding domain AH4AK4_2472 PF03741 Integral membrane protein TerC family AH4AK4_2472 PF03471 Transporter associated domain AH4AK4_2473 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AH4AK4_2474 PF00962 Adenosine/AMP deaminase AH4AK4_2475 PF13344 Haloacid dehalogenase-like hydrolase AH4AK4_2477 PF13537 Glutamine amidotransferase domain AH4AK4_2477 PF00733 Asparagine synthase AH4AK4_2479 PF14497 Glutathione S-transferase, C-terminal domain AH4AK4_2479 PF02798 Glutathione S-transferase, N-terminal domain AH4AK4_2481 PF04209 homogentisate 1,2-dioxygenase AH4AK4_2482 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AH4AK4_2484 PF00849 RNA pseudouridylate synthase AH4AK4_2485 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_2485 PF08448 PAS fold AH4AK4_2486 PF08447 PAS fold AH4AK4_2486 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_2487 PF00501 AMP-binding enzyme AH4AK4_2487 PF13193 AMP-binding enzyme C-terminal domain AH4AK4_2489 PF12833 Helix-turn-helix domain AH4AK4_2492 PF07044 Protein of unknown function (DUF1329) AH4AK4_2494 PF01144 Coenzyme A transferase AH4AK4_2495 PF01144 Coenzyme A transferase AH4AK4_2496 PF03601 Conserved hypothetical protein 698 AH4AK4_2498 PF07690 Major Facilitator Superfamily AH4AK4_2499 PF05853 beta-keto acid cleavage enzyme AH4AK4_2500 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AH4AK4_2501 PF00107 Zinc-binding dehydrogenase AH4AK4_2501 PF08240 Alcohol dehydrogenase GroES-like domain AH4AK4_2503 PF00285 Citrate synthase, C-terminal domain AH4AK4_2504 PF00330 Aconitase family (aconitate hydratase) AH4AK4_2504 PF00694 Aconitase C-terminal domain AH4AK4_2505 PF04303 PrpF protein AH4AK4_2507 PF11999 Protein of unknown function (DUF3494) AH4AK4_2507 PF02368 Bacterial Ig-like domain (group 2) AH4AK4_2509 PF00419 Fimbrial protein AH4AK4_2509 PF09222 Fimbrial adhesin F17-AG, lectin domain AH4AK4_2510 PF13954 PapC N-terminal domain AH4AK4_2510 PF13953 PapC C-terminal domain AH4AK4_2510 PF00577 Outer membrane usher protein AH4AK4_2511 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AH4AK4_2511 PF02753 Pili assembly chaperone PapD, C-terminal domain AH4AK4_2512 PF00419 Fimbrial protein AH4AK4_2514 PF01027 Inhibitor of apoptosis-promoting Bax1 AH4AK4_2515 PF12805 FUSC-like inner membrane protein yccS AH4AK4_2516 PF04358 DsrC like protein AH4AK4_2517 PF05036 Sporulation related domain AH4AK4_2518 PF02875 Mur ligase family, glutamate ligase domain AH4AK4_2518 PF08245 Mur ligase middle domain AH4AK4_2519 PF01039 Carboxyl transferase domain AH4AK4_2519 PF17848 Acetyl-coA carboxylase zinc finger domain AH4AK4_2520 PF01416 tRNA pseudouridine synthase AH4AK4_2523 PF01118 Semialdehyde dehydrogenase, NAD binding domain AH4AK4_2523 PF02774 Semialdehyde dehydrogenase, dimerisation domain AH4AK4_2524 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AH4AK4_2524 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AH4AK4_2524 PF11890 Domain of unknown function (DUF3410) AH4AK4_2525 PF01569 PAP2 superfamily AH4AK4_2526 PF03180 NLPA lipoprotein AH4AK4_2529 PF00005 ABC transporter AH4AK4_2530 PF00082 Subtilase family AH4AK4_2530 PF01483 Proprotein convertase P-domain AH4AK4_2533 PF02896 PEP-utilising enzyme, TIM barrel domain AH4AK4_2533 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AH4AK4_2533 PF00391 PEP-utilising enzyme, mobile domain AH4AK4_2534 PF03618 Kinase/pyrophosphorylase AH4AK4_2536 PF00324 Amino acid permease AH4AK4_2544 PF03412 Peptidase C39 family AH4AK4_2544 PF00005 ABC transporter AH4AK4_2544 PF00664 ABC transporter transmembrane region AH4AK4_2545 PF16199 Radical_SAM C-terminal domain AH4AK4_2545 PF04055 Radical SAM superfamily AH4AK4_2546 PF01645 Conserved region in glutamate synthase AH4AK4_2546 PF01493 GXGXG motif AH4AK4_2546 PF00310 Glutamine amidotransferases class-II AH4AK4_2546 PF04898 Glutamate synthase central domain AH4AK4_2547 PF07992 Pyridine nucleotide-disulphide oxidoreductase AH4AK4_2547 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AH4AK4_2548 PF00005 ABC transporter AH4AK4_2549 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_2550 PF00497 Bacterial extracellular solute-binding proteins, family 3 AH4AK4_2551 PF00376 MerR family regulatory protein AH4AK4_2551 PF09278 MerR, DNA binding AH4AK4_2554 PF14521 Lysine-specific metallo-endopeptidase AH4AK4_2556 PF00271 Helicase conserved C-terminal domain AH4AK4_2556 PF00270 DEAD/DEAH box helicase AH4AK4_2559 PF08378 Nuclease-related domain AH4AK4_2560 PF07759 Protein of unknown function (DUF1615) AH4AK4_2561 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_2562 PF00682 HMGL-like AH4AK4_2562 PF08502 LeuA allosteric (dimerisation) domain AH4AK4_2564 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AH4AK4_2564 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AH4AK4_2564 PF02142 MGS-like domain AH4AK4_2565 PF00117 Glutamine amidotransferase class-I AH4AK4_2565 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AH4AK4_2566 PF01113 Dihydrodipicolinate reductase, N-terminus AH4AK4_2566 PF05173 Dihydrodipicolinate reductase, C-terminus AH4AK4_2568 PF01812 5-formyltetrahydrofolate cyclo-ligase family AH4AK4_2569 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AH4AK4_2571 PF01842 ACT domain AH4AK4_2571 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AH4AK4_2571 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AH4AK4_2572 PF01219 Prokaryotic diacylglycerol kinase AH4AK4_2573 PF00793 DAHP synthetase I family AH4AK4_2574 PF00005 ABC transporter AH4AK4_2575 PF01032 FecCD transport family AH4AK4_2578 PF00437 Type II/IV secretion system protein AH4AK4_2579 PF00483 Nucleotidyl transferase AH4AK4_2581 PF07670 Nucleoside recognition AH4AK4_2581 PF07664 Ferrous iron transport protein B C terminus AH4AK4_2581 PF02421 Ferrous iron transport protein B AH4AK4_2583 PF01253 Translation initiation factor SUI1 AH4AK4_2584 PF01169 Uncharacterized protein family UPF0016 AH4AK4_2591 PF13185 GAF domain AH4AK4_2591 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_2593 PF13286 Phosphohydrolase-associated domain AH4AK4_2593 PF01966 HD domain AH4AK4_2595 PF01406 tRNA synthetases class I (C) catalytic domain AH4AK4_2595 PF09190 DALR domain AH4AK4_2596 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AH4AK4_2598 PF00149 Calcineurin-like phosphoesterase AH4AK4_2599 PF04226 Transglycosylase associated protein AH4AK4_2600 PF13417 Glutathione S-transferase, N-terminal domain AH4AK4_2600 PF00043 Glutathione S-transferase, C-terminal domain AH4AK4_2603 PF03466 LysR substrate binding domain AH4AK4_2603 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_2605 PF02899 Phage integrase, N-terminal SAM-like domain AH4AK4_2605 PF00589 Phage integrase family AH4AK4_2610 PF06892 Phage regulatory protein CII (CP76) AH4AK4_2619 PF13438 Domain of unknown function (DUF4113) AH4AK4_2619 PF00817 impB/mucB/samB family AH4AK4_2619 PF11799 impB/mucB/samB family C-terminal domain AH4AK4_2620 PF00717 Peptidase S24-like AH4AK4_2639 PF09669 Phage regulatory protein Rha (Phage_pRha) AH4AK4_2639 PF10549 ORF11CD3 domain AH4AK4_2646 PF07484 Phage Tail Collar Domain AH4AK4_2646 PF03335 Phage tail fibre repeat AH4AK4_2648 PF04984 Phage tail sheath protein subtilisin-like domain AH4AK4_2648 PF17482 Phage tail sheath C-terminal domain AH4AK4_2660 PF01066 CDP-alcohol phosphatidyltransferase AH4AK4_2661 PF08459 UvrC Helix-hairpin-helix N-terminal AH4AK4_2661 PF01541 GIY-YIG catalytic domain AH4AK4_2661 PF02151 UvrB/uvrC motif AH4AK4_2663 PF00196 Bacterial regulatory proteins, luxR family AH4AK4_2663 PF00072 Response regulator receiver domain AH4AK4_2664 PF02348 Cytidylyltransferase AH4AK4_2665 PF03966 Trm112p-like protein AH4AK4_2666 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AH4AK4_2667 PF00005 ABC transporter AH4AK4_2667 PF00664 ABC transporter transmembrane region AH4AK4_2668 PF00753 Metallo-beta-lactamase superfamily AH4AK4_2668 PF03772 Competence protein AH4AK4_2671 PF05872 Bacterial protein of unknown function (DUF853) AH4AK4_2672 PF00155 Aminotransferase class I and II AH4AK4_2674 PF13609 Gram-negative porin AH4AK4_2675 PF06733 DEAD_2 AH4AK4_2675 PF13307 Helicase C-terminal domain AH4AK4_2677 PF00850 Histone deacetylase domain AH4AK4_2678 PF07690 Major Facilitator Superfamily AH4AK4_2679 PF01926 50S ribosome-binding GTPase AH4AK4_2680 PF00245 Alkaline phosphatase AH4AK4_2681 PF00245 Alkaline phosphatase AH4AK4_2684 PF01272 Transcription elongation factor, GreA/GreB, C-term AH4AK4_2684 PF14760 Rnk N-terminus AH4AK4_2685 PF00196 Bacterial regulatory proteins, luxR family AH4AK4_2685 PF00072 Response regulator receiver domain AH4AK4_2686 PF05231 MASE1 AH4AK4_2686 PF07730 Histidine kinase AH4AK4_2686 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_2687 PF07690 Major Facilitator Superfamily AH4AK4_2688 PF17151 Periplasmic sensor domain AH4AK4_2688 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_2689 PF00497 Bacterial extracellular solute-binding proteins, family 3 AH4AK4_2690 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_2693 PF00005 ABC transporter AH4AK4_2695 PF04116 Fatty acid hydroxylase superfamily AH4AK4_2696 PF13520 Amino acid permease AH4AK4_2699 PF03471 Transporter associated domain AH4AK4_2699 PF01595 Cyclin M transmembrane N-terminal domain AH4AK4_2699 PF00571 CBS domain AH4AK4_2700 PF01895 PhoU domain AH4AK4_2702 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_2703 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_2704 PF14437 MafB19-like deaminase AH4AK4_2707 PF01274 Malate synthase AH4AK4_2708 PF00463 Isocitrate lyase family AH4AK4_2709 PF00308 Bacterial dnaA protein AH4AK4_2712 PF02769 AIR synthase related protein, C-terminal domain AH4AK4_2712 PF00586 AIR synthase related protein, N-terminal domain AH4AK4_2713 PF00551 Formyl transferase AH4AK4_2714 PF01784 NIF3 (NGG1p interacting factor 3) AH4AK4_2716 PF00158 Sigma-54 interaction domain AH4AK4_2716 PF02954 Bacterial regulatory protein, Fis family AH4AK4_2717 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_2717 PF00989 PAS fold AH4AK4_2717 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_2718 PF02954 Bacterial regulatory protein, Fis family AH4AK4_2718 PF00072 Response regulator receiver domain AH4AK4_2718 PF00158 Sigma-54 interaction domain AH4AK4_2721 PF01842 ACT domain AH4AK4_2722 PF17941 Polyphosphate kinase C-terminal domain 1 AH4AK4_2722 PF13090 Polyphosphate kinase C-terminal domain 2 AH4AK4_2722 PF02503 Polyphosphate kinase middle domain AH4AK4_2722 PF13089 Polyphosphate kinase N-terminal domain AH4AK4_2723 PF02541 Ppx/GppA phosphatase family AH4AK4_2724 PF03448 MgtE intracellular N domain AH4AK4_2724 PF00571 CBS domain AH4AK4_2724 PF01769 Divalent cation transporter AH4AK4_2726 PF07196 Flagellin hook IN motif AH4AK4_2726 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AH4AK4_2727 PF10135 Rod binding protein AH4AK4_2727 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AH4AK4_2728 PF02119 Flagellar P-ring protein AH4AK4_2729 PF02107 Flagellar L-ring protein AH4AK4_2730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AH4AK4_2730 PF00460 Flagella basal body rod protein AH4AK4_2731 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AH4AK4_2731 PF00460 Flagella basal body rod protein AH4AK4_2732 PF07559 Flagellar basal body protein FlaE AH4AK4_2732 PF00460 Flagella basal body rod protein AH4AK4_2732 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AH4AK4_2734 PF00460 Flagella basal body rod protein AH4AK4_2734 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AH4AK4_2735 PF00460 Flagella basal body rod protein AH4AK4_2736 PF03705 CheR methyltransferase, all-alpha domain AH4AK4_2736 PF01739 CheR methyltransferase, SAM binding domain AH4AK4_2737 PF01584 CheW-like domain AH4AK4_2737 PF00072 Response regulator receiver domain AH4AK4_2738 PF13144 Chaperone for flagella basal body P-ring formation AH4AK4_2741 PF12850 Calcineurin-like phosphoesterase superfamily domain AH4AK4_2742 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AH4AK4_2744 PF01479 S4 domain AH4AK4_2744 PF00849 RNA pseudouridylate synthase AH4AK4_2745 PF01966 HD domain AH4AK4_2745 PF11871 Domain of unknown function (DUF3391) AH4AK4_2747 PF00892 EamA-like transporter family AH4AK4_2748 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AH4AK4_2753 PF00313 'Cold-shock' DNA-binding domain AH4AK4_2754 PF02817 e3 binding domain AH4AK4_2754 PF00364 Biotin-requiring enzyme AH4AK4_2754 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AH4AK4_2755 PF02780 Transketolase, C-terminal domain AH4AK4_2755 PF02779 Transketolase, pyrimidine binding domain AH4AK4_2756 PF00676 Dehydrogenase E1 component AH4AK4_2757 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AH4AK4_2760 PF05472 DNA replication terminus site-binding protein (Ter protein) AH4AK4_2761 PF00176 SNF2 family N-terminal domain AH4AK4_2761 PF04434 SWIM zinc finger AH4AK4_2761 PF00271 Helicase conserved C-terminal domain AH4AK4_2762 PF04337 Protein of unknown function, DUF480 AH4AK4_2765 PF02706 Chain length determinant protein AH4AK4_2766 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AH4AK4_2766 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AH4AK4_2766 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AH4AK4_2767 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AH4AK4_2768 PF00483 Nucleotidyl transferase AH4AK4_2769 PF04321 RmlD substrate binding domain AH4AK4_2770 PF02397 Bacterial sugar transferase AH4AK4_2772 PF13439 Glycosyltransferase Family 4 AH4AK4_2772 PF00534 Glycosyl transferases group 1 AH4AK4_2776 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AH4AK4_2778 PF00483 Nucleotidyl transferase AH4AK4_2779 PF16363 GDP-mannose 4,6 dehydratase AH4AK4_2780 PF00072 Response regulator receiver domain AH4AK4_2780 PF00486 Transcriptional regulatory protein, C terminal AH4AK4_2781 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_2781 PF08918 PhoQ Sensor AH4AK4_2783 PF02685 Glucokinase AH4AK4_2784 PF01418 Helix-turn-helix domain, rpiR family AH4AK4_2784 PF01380 SIS domain AH4AK4_2785 PF00224 Pyruvate kinase, barrel domain AH4AK4_2785 PF02887 Pyruvate kinase, alpha/beta domain AH4AK4_2787 PF00873 AcrB/AcrD/AcrF family AH4AK4_2788 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AH4AK4_2788 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AH4AK4_2788 PF09317 Domain of unknown function (DUF1974) AH4AK4_2788 PF02770 Acyl-CoA dehydrogenase, middle domain AH4AK4_2789 PF00440 Bacterial regulatory proteins, tetR family AH4AK4_2801 PF00817 impB/mucB/samB family AH4AK4_2801 PF11798 IMS family HHH motif AH4AK4_2801 PF13438 Domain of unknown function (DUF4113) AH4AK4_2801 PF11799 impB/mucB/samB family C-terminal domain AH4AK4_2802 PF00717 Peptidase S24-like AH4AK4_2804 PF01555 DNA methylase AH4AK4_2814 PF04002 RadC-like JAB domain AH4AK4_2818 PF02321 Outer membrane efflux protein AH4AK4_2819 PF00873 AcrB/AcrD/AcrF family AH4AK4_2820 PF00529 HlyD membrane-fusion protein of T1SS AH4AK4_2820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AH4AK4_2821 PF08361 MAATS-type transcriptional repressor, C-terminal region AH4AK4_2821 PF00440 Bacterial regulatory proteins, tetR family AH4AK4_2825 PF01479 S4 domain AH4AK4_2825 PF00849 RNA pseudouridylate synthase AH4AK4_2826 PF04079 Segregation and condensation complex subunit ScpB AH4AK4_2827 PF02616 Segregation and condensation protein ScpA AH4AK4_2828 PF01300 Telomere recombination AH4AK4_2829 PF02811 PHP domain AH4AK4_2831 PF00425 chorismate binding enzyme AH4AK4_2831 PF04715 Anthranilate synthase component I, N terminal region AH4AK4_2832 PF02885 Glycosyl transferase family, helical bundle domain AH4AK4_2832 PF00117 Glutamine amidotransferase class-I AH4AK4_2832 PF00591 Glycosyl transferase family, a/b domain AH4AK4_2833 PF00591 Glycosyl transferase family, a/b domain AH4AK4_2833 PF02885 Glycosyl transferase family, helical bundle domain AH4AK4_2834 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AH4AK4_2834 PF00218 Indole-3-glycerol phosphate synthase AH4AK4_2835 PF00291 Pyridoxal-phosphate dependent enzyme AH4AK4_2836 PF00290 Tryptophan synthase alpha chain AH4AK4_2839 PF04307 LexA-binding, inner membrane-associated putative hydrolase AH4AK4_2843 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_2843 PF03466 LysR substrate binding domain AH4AK4_2845 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AH4AK4_2846 PF00005 ABC transporter AH4AK4_2847 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_2848 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_2849 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_2850 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AH4AK4_2851 PF07237 Protein of unknown function (DUF1428) AH4AK4_2852 PF07690 Major Facilitator Superfamily AH4AK4_2853 PF01040 UbiA prenyltransferase family AH4AK4_2854 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AH4AK4_2855 PF00510 Cytochrome c oxidase subunit III AH4AK4_2856 PF00115 Cytochrome C and Quinol oxidase polypeptide I AH4AK4_2857 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AH4AK4_2857 PF06481 COX Aromatic Rich Motif AH4AK4_2858 PF02627 Carboxymuconolactone decarboxylase family AH4AK4_2859 PF03466 LysR substrate binding domain AH4AK4_2859 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_2861 PF01156 Inosine-uridine preferring nucleoside hydrolase AH4AK4_2864 PF00127 Copper binding proteins, plastocyanin/azurin family AH4AK4_2865 PF02424 ApbE family AH4AK4_2866 PF00011 Hsp20/alpha crystallin family AH4AK4_2869 PF03372 Endonuclease/Exonuclease/phosphatase family AH4AK4_2871 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AH4AK4_2871 PF00529 HlyD membrane-fusion protein of T1SS AH4AK4_2872 PF00873 AcrB/AcrD/AcrF family AH4AK4_2875 PF10437 Bacterial lipoate protein ligase C-terminus AH4AK4_2875 PF03099 Biotin/lipoate A/B protein ligase family AH4AK4_2876 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_2876 PF00563 EAL domain AH4AK4_2876 PF03707 Bacterial signalling protein N terminal repeat AH4AK4_2877 PF00005 ABC transporter AH4AK4_2877 PF12704 MacB-like periplasmic core domain AH4AK4_2877 PF02687 FtsX-like permease family AH4AK4_2878 PF12704 MacB-like periplasmic core domain AH4AK4_2878 PF00005 ABC transporter AH4AK4_2878 PF02687 FtsX-like permease family AH4AK4_2879 PF12704 MacB-like periplasmic core domain AH4AK4_2879 PF00005 ABC transporter AH4AK4_2879 PF02687 FtsX-like permease family AH4AK4_2882 PF04143 Sulphur transport AH4AK4_2883 PF01022 Bacterial regulatory protein, arsR family AH4AK4_2885 PF02308 MgtC family AH4AK4_2886 PF13407 Periplasmic binding protein domain AH4AK4_2886 PF00356 Bacterial regulatory proteins, lacI family AH4AK4_2887 PF00251 Glycosyl hydrolases family 32 N-terminal domain AH4AK4_2887 PF08244 Glycosyl hydrolases family 32 C terminal AH4AK4_2888 PF00367 phosphotransferase system, EIIB AH4AK4_2888 PF02378 Phosphotransferase system, EIIC AH4AK4_2889 PF00294 pfkB family carbohydrate kinase AH4AK4_2890 PF11471 Maltoporin periplasmic N-terminal extension AH4AK4_2890 PF02264 LamB porin AH4AK4_2891 PF00226 DnaJ domain AH4AK4_2891 PF01556 DnaJ C terminal domain AH4AK4_2891 PF00684 DnaJ central domain AH4AK4_2892 PF00012 Hsp70 protein AH4AK4_2893 PF01025 GrpE AH4AK4_2894 PF01513 ATP-NAD kinase AH4AK4_2895 PF17158 Membrane-associated sensor, integral membrane domain AH4AK4_2895 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_2896 PF02463 RecF/RecN/SMC N terminal domain AH4AK4_2897 PF02833 DHHA2 domain AH4AK4_2897 PF01368 DHH family AH4AK4_2899 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AH4AK4_2900 PF12704 MacB-like periplasmic core domain AH4AK4_2900 PF02687 FtsX-like permease family AH4AK4_2900 PF00005 ABC transporter AH4AK4_2901 PF02321 Outer membrane efflux protein AH4AK4_2902 PF08021 Siderophore-interacting FAD-binding domain AH4AK4_2902 PF04954 Siderophore-interacting protein AH4AK4_2904 PF00793 DAHP synthetase I family AH4AK4_2905 PF00816 H-NS histone family AH4AK4_2906 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_2906 PF03466 LysR substrate binding domain AH4AK4_2907 PF02447 GntP family permease AH4AK4_2908 PF00291 Pyridoxal-phosphate dependent enzyme AH4AK4_2911 PF00180 Isocitrate/isopropylmalate dehydrogenase AH4AK4_2912 PF12833 Helix-turn-helix domain AH4AK4_2913 PF01238 Phosphomannose isomerase type I AH4AK4_2914 PF10688 Bacterial inner membrane protein AH4AK4_2919 PF11999 Protein of unknown function (DUF3494) AH4AK4_2919 PF02368 Bacterial Ig-like domain (group 2) AH4AK4_2921 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AH4AK4_2921 PF02378 Phosphotransferase system, EIIC AH4AK4_2921 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AH4AK4_2922 PF07690 Major Facilitator Superfamily AH4AK4_2924 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AH4AK4_2925 PF08279 HTH domain AH4AK4_2925 PF05043 Mga helix-turn-helix domain AH4AK4_2925 PF00874 PRD domain AH4AK4_2925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AH4AK4_2926 PF00849 RNA pseudouridylate synthase AH4AK4_2927 PF00293 NUDIX domain AH4AK4_2929 PF04356 Protein of unknown function (DUF489) AH4AK4_2930 PF00206 Lyase AH4AK4_2930 PF08328 Adenylosuccinate lyase C-terminal AH4AK4_2931 PF08007 Cupin superfamily protein AH4AK4_2932 PF00224 Pyruvate kinase, barrel domain AH4AK4_2932 PF02887 Pyruvate kinase, alpha/beta domain AH4AK4_2933 PF00924 Mechanosensitive ion channel AH4AK4_2933 PF12795 Mechanosensitive ion channel porin domain AH4AK4_2933 PF12794 Mechanosensitive ion channel inner membrane domain 1 AH4AK4_2934 PF01810 LysE type translocator AH4AK4_2935 PF10282 Lactonase, 7-bladed beta-propeller AH4AK4_2938 PF00860 Permease family AH4AK4_2940 PF00390 Malic enzyme, N-terminal domain AH4AK4_2940 PF03949 Malic enzyme, NAD binding domain AH4AK4_2941 PF12804 MobA-like NTP transferase domain AH4AK4_2942 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AH4AK4_2943 PF04632 Fusaric acid resistance protein family AH4AK4_2947 PF13426 PAS domain AH4AK4_2947 PF08447 PAS fold AH4AK4_2947 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_2952 PF05114 Protein of unknown function (DUF692) AH4AK4_2957 PF00583 Acetyltransferase (GNAT) family AH4AK4_2958 PF01381 Helix-turn-helix AH4AK4_2958 PF08671 Anti-repressor SinI AH4AK4_2960 PF13474 SnoaL-like domain AH4AK4_2961 PF14821 Threonine synthase N terminus AH4AK4_2961 PF00291 Pyridoxal-phosphate dependent enzyme AH4AK4_2962 PF00288 GHMP kinases N terminal domain AH4AK4_2962 PF08544 GHMP kinases C terminal AH4AK4_2963 PF00742 Homoserine dehydrogenase AH4AK4_2963 PF01842 ACT domain AH4AK4_2963 PF03447 Homoserine dehydrogenase, NAD binding domain AH4AK4_2963 PF13840 ACT domain AH4AK4_2963 PF00696 Amino acid kinase family AH4AK4_2964 PF00588 SpoU rRNA Methylase family AH4AK4_2965 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AH4AK4_2968 PF03737 Aldolase/RraA AH4AK4_2970 PF00486 Transcriptional regulatory protein, C terminal AH4AK4_2970 PF00072 Response regulator receiver domain AH4AK4_2973 PF00005 ABC transporter AH4AK4_2973 PF00664 ABC transporter transmembrane region AH4AK4_2974 PF00005 ABC transporter AH4AK4_2974 PF00664 ABC transporter transmembrane region AH4AK4_2978 PF18389 TrmO C-terminal domain AH4AK4_2978 PF01980 tRNA-methyltransferase O AH4AK4_2979 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AH4AK4_2979 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AH4AK4_2981 PF00004 ATPase family associated with various cellular activities (AAA) AH4AK4_2981 PF17862 AAA+ lid domain AH4AK4_2981 PF01434 Peptidase family M41 AH4AK4_2982 PF00291 Pyridoxal-phosphate dependent enzyme AH4AK4_2983 PF00381 PTS HPr component phosphorylation site AH4AK4_2984 PF02896 PEP-utilising enzyme, TIM barrel domain AH4AK4_2984 PF00391 PEP-utilising enzyme, mobile domain AH4AK4_2984 PF05524 PEP-utilising enzyme, N-terminal AH4AK4_2985 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AH4AK4_2986 PF01292 Prokaryotic cytochrome b561 AH4AK4_2987 PF13476 AAA domain AH4AK4_2988 PF00149 Calcineurin-like phosphoesterase AH4AK4_2988 PF12320 Type 5 capsule protein repressor C-terminal domain AH4AK4_2989 PF13673 Acetyltransferase (GNAT) domain AH4AK4_2990 PF04381 Putative exonuclease, RdgC AH4AK4_2991 PF13472 GDSL-like Lipase/Acylhydrolase family AH4AK4_2993 PF02254 TrkA-N domain AH4AK4_2993 PF00999 Sodium/hydrogen exchanger family AH4AK4_2994 PF02954 Bacterial regulatory protein, Fis family AH4AK4_2994 PF00072 Response regulator receiver domain AH4AK4_2994 PF00158 Sigma-54 interaction domain AH4AK4_3000 PF01266 FAD dependent oxidoreductase AH4AK4_3001 PF07883 Cupin domain AH4AK4_3001 PF01381 Helix-turn-helix AH4AK4_3002 PF00171 Aldehyde dehydrogenase family AH4AK4_3003 PF00202 Aminotransferase class-III AH4AK4_3004 PF00324 Amino acid permease AH4AK4_3005 PF13520 Amino acid permease AH4AK4_3007 PF02690 Na+/Pi-cotransporter AH4AK4_3008 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AH4AK4_3008 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AH4AK4_3009 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AH4AK4_3010 PF00497 Bacterial extracellular solute-binding proteins, family 3 AH4AK4_3010 PF00072 Response regulator receiver domain AH4AK4_3010 PF00989 PAS fold AH4AK4_3010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_3010 PF01627 Hpt domain AH4AK4_3010 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_3012 PF10725 Protein of unknown function (DUF2517) AH4AK4_3016 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_3016 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_3016 PF00072 Response regulator receiver domain AH4AK4_3016 PF09308 LuxQ, periplasmic AH4AK4_3017 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_3017 PF03466 LysR substrate binding domain AH4AK4_3018 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AH4AK4_3020 PF07690 Major Facilitator Superfamily AH4AK4_3022 PF02705 K+ potassium transporter AH4AK4_3025 PF17969 L,D-transpeptidase C-terminal domain AH4AK4_3025 PF03734 L,D-transpeptidase catalytic domain AH4AK4_3025 PF01476 LysM domain AH4AK4_3028 PF05971 RNA methyltransferase AH4AK4_3029 PF00877 NlpC/P60 family AH4AK4_3030 PF01648 4'-phosphopantetheinyl transferase superfamily AH4AK4_3031 PF00085 Thioredoxin AH4AK4_3033 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AH4AK4_3035 PF01842 ACT domain AH4AK4_3035 PF00551 Formyl transferase AH4AK4_3037 PF13091 PLD-like domain AH4AK4_3037 PF13396 Phospholipase_D-nuclease N-terminal AH4AK4_3040 PF01551 Peptidase family M23 AH4AK4_3040 PF10145 Phage-related minor tail protein AH4AK4_3040 PF01464 Transglycosylase SLT domain AH4AK4_3042 PF00230 Major intrinsic protein AH4AK4_3043 PF02075 Crossover junction endodeoxyribonuclease RuvC AH4AK4_3044 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AH4AK4_3049 PF02463 RecF/RecN/SMC N terminal domain AH4AK4_3050 PF04055 Radical SAM superfamily AH4AK4_3050 PF08497 Radical SAM N-terminal AH4AK4_3050 PF11842 Domain of unknown function (DUF3362) AH4AK4_3052 PF00873 AcrB/AcrD/AcrF family AH4AK4_3054 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_3055 PF01734 Patatin-like phospholipase AH4AK4_3056 PF00209 Sodium:neurotransmitter symporter family AH4AK4_3059 PF01389 OmpA-like transmembrane domain AH4AK4_3059 PF00691 OmpA family AH4AK4_3061 PF01389 OmpA-like transmembrane domain AH4AK4_3061 PF00691 OmpA family AH4AK4_3062 PF00691 OmpA family AH4AK4_3062 PF01389 OmpA-like transmembrane domain AH4AK4_3063 PF00390 Malic enzyme, N-terminal domain AH4AK4_3063 PF03949 Malic enzyme, NAD binding domain AH4AK4_3064 PF12833 Helix-turn-helix domain AH4AK4_3065 PF01554 MatE AH4AK4_3067 PF10692 Protein of unknown function (DUF2498) AH4AK4_3068 PF00072 Response regulator receiver domain AH4AK4_3068 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_3070 PF00860 Permease family AH4AK4_3072 PF01235 Sodium:alanine symporter family AH4AK4_3073 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AH4AK4_3073 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AH4AK4_3074 PF01699 Sodium/calcium exchanger protein AH4AK4_3075 PF08534 Redoxin AH4AK4_3076 PF00293 NUDIX domain AH4AK4_3078 PF00005 ABC transporter AH4AK4_3079 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_3080 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_3081 PF00497 Bacterial extracellular solute-binding proteins, family 3 AH4AK4_3085 PF00005 ABC transporter AH4AK4_3086 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AH4AK4_3086 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AH4AK4_3087 PF03932 CutC family AH4AK4_3088 PF00480 ROK family AH4AK4_3090 PF01435 Peptidase family M48 AH4AK4_3091 PF12849 PBP superfamily domain AH4AK4_3092 PF00989 PAS fold AH4AK4_3092 PF11808 Phosphate regulon sensor protein PhoR AH4AK4_3092 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_3092 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_3093 PF00072 Response regulator receiver domain AH4AK4_3093 PF00486 Transcriptional regulatory protein, C terminal AH4AK4_3094 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AH4AK4_3095 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_3095 PF17158 Membrane-associated sensor, integral membrane domain AH4AK4_3096 PF00158 Sigma-54 interaction domain AH4AK4_3096 PF02954 Bacterial regulatory protein, Fis family AH4AK4_3096 PF01590 GAF domain AH4AK4_3098 PF00171 Aldehyde dehydrogenase family AH4AK4_3100 PF00892 EamA-like transporter family AH4AK4_3101 PF12431 Transcriptional regulator AH4AK4_3101 PF00072 Response regulator receiver domain AH4AK4_3102 PF17203 Single cache domain 3 AH4AK4_3102 PF00989 PAS fold AH4AK4_3102 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AH4AK4_3102 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_3103 PF03949 Malic enzyme, NAD binding domain AH4AK4_3103 PF00390 Malic enzyme, N-terminal domain AH4AK4_3104 PF03390 2-hydroxycarboxylate transporter family AH4AK4_3106 PF01047 MarR family AH4AK4_3107 PF00529 HlyD membrane-fusion protein of T1SS AH4AK4_3107 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AH4AK4_3111 PF01679 Proteolipid membrane potential modulator AH4AK4_3113 PF03477 ATP cone domain AH4AK4_3113 PF13597 Anaerobic ribonucleoside-triphosphate reductase AH4AK4_3115 PF01653 NAD-dependent DNA ligase adenylation domain AH4AK4_3115 PF03120 NAD-dependent DNA ligase OB-fold domain AH4AK4_3115 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AH4AK4_3115 PF12826 Helix-hairpin-helix motif AH4AK4_3115 PF00533 BRCA1 C Terminus (BRCT) domain AH4AK4_3116 PF04354 ZipA, C-terminal FtsZ-binding domain AH4AK4_3117 PF06470 SMC proteins Flexible Hinge Domain AH4AK4_3117 PF02463 RecF/RecN/SMC N terminal domain AH4AK4_3119 PF03458 UPF0126 domain AH4AK4_3121 PF05951 Bacterial protein of unknown function (DUF882) AH4AK4_3122 PF01471 Putative peptidoglycan binding domain AH4AK4_3122 PF03734 L,D-transpeptidase catalytic domain AH4AK4_3125 PF00535 Glycosyl transferase family 2 AH4AK4_3128 PF00128 Alpha amylase, catalytic domain AH4AK4_3130 PF00072 Response regulator receiver domain AH4AK4_3130 PF00196 Bacterial regulatory proteins, luxR family AH4AK4_3134 PF00999 Sodium/hydrogen exchanger family AH4AK4_3134 PF02254 TrkA-N domain AH4AK4_3134 PF02080 TrkA-C domain AH4AK4_3135 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_3136 PF11734 TilS substrate C-terminal domain AH4AK4_3136 PF01171 PP-loop family AH4AK4_3136 PF09179 TilS substrate binding domain AH4AK4_3137 PF05649 Peptidase family M13 AH4AK4_3137 PF01431 Peptidase family M13 AH4AK4_3141 PF13520 Amino acid permease AH4AK4_3143 PF03466 LysR substrate binding domain AH4AK4_3143 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_3145 PF06165 Glycosyltransferase family 36 AH4AK4_3145 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AH4AK4_3145 PF10091 Putative glucoamylase AH4AK4_3148 PF04972 BON domain AH4AK4_3149 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AH4AK4_3150 PF01336 OB-fold nucleic acid binding domain AH4AK4_3150 PF02811 PHP domain AH4AK4_3150 PF14579 Helix-hairpin-helix motif AH4AK4_3150 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AH4AK4_3150 PF07733 Bacterial DNA polymerase III alpha NTPase domain AH4AK4_3151 PF01351 Ribonuclease HII AH4AK4_3152 PF02684 Lipid-A-disaccharide synthetase AH4AK4_3153 PF00132 Bacterial transferase hexapeptide (six repeats) AH4AK4_3153 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AH4AK4_3154 PF07977 FabA-like domain AH4AK4_3155 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AH4AK4_3155 PF00132 Bacterial transferase hexapeptide (six repeats) AH4AK4_3156 PF03938 Outer membrane protein (OmpH-like) AH4AK4_3157 PF01103 Surface antigen AH4AK4_3157 PF07244 Surface antigen variable number repeat AH4AK4_3158 PF02163 Peptidase family M50 AH4AK4_3158 PF17820 PDZ domain AH4AK4_3159 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AH4AK4_3159 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AH4AK4_3159 PF13288 DXP reductoisomerase C-terminal domain AH4AK4_3161 PF01255 Putative undecaprenyl diphosphate synthase AH4AK4_3162 PF01765 Ribosome recycling factor AH4AK4_3163 PF00696 Amino acid kinase family AH4AK4_3165 PF00889 Elongation factor TS AH4AK4_3166 PF00318 Ribosomal protein S2 AH4AK4_3167 PF00557 Metallopeptidase family M24 AH4AK4_3168 PF01909 Nucleotidyltransferase domain AH4AK4_3168 PF01966 HD domain AH4AK4_3168 PF08335 GlnD PII-uridylyltransferase AH4AK4_3168 PF01842 ACT domain AH4AK4_3169 PF00132 Bacterial transferase hexapeptide (six repeats) AH4AK4_3169 PF14602 Hexapeptide repeat of succinyl-transferase AH4AK4_3169 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AH4AK4_3170 PF11944 Protein of unknown function (DUF3461) AH4AK4_3171 PF00367 phosphotransferase system, EIIB AH4AK4_3171 PF02378 Phosphotransferase system, EIIC AH4AK4_3172 PF07148 Maltose operon periplasmic protein precursor (MalM) AH4AK4_3173 PF02264 LamB porin AH4AK4_3174 PF00258 Flavodoxin AH4AK4_3175 PF00849 RNA pseudouridylate synthase AH4AK4_3176 PF04287 tRNA pseudouridine synthase C AH4AK4_3182 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) AH4AK4_3183 PF07348 Syd protein (SUKH-2) AH4AK4_3184 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AH4AK4_3184 PF14489 QueF-like protein AH4AK4_3186 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_3188 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AH4AK4_3188 PF03641 Possible lysine decarboxylase AH4AK4_3188 PF11892 Domain of unknown function (DUF3412) AH4AK4_3189 PF01367 5'-3' exonuclease, C-terminal SAM fold AH4AK4_3189 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AH4AK4_3190 PF18324 Hypothetical protein TT1725 AH4AK4_3190 PF00180 Isocitrate/isopropylmalate dehydrogenase AH4AK4_3192 PF01728 FtsJ-like methyltransferase AH4AK4_3192 PF18125 RlmM ferredoxin-like domain AH4AK4_3193 PF04241 Protein of unknown function (DUF423) AH4AK4_3195 PF03466 LysR substrate binding domain AH4AK4_3195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_3196 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_3196 PF00672 HAMP domain AH4AK4_3197 PF11798 IMS family HHH motif AH4AK4_3197 PF11799 impB/mucB/samB family C-terminal domain AH4AK4_3197 PF00817 impB/mucB/samB family AH4AK4_3200 PF02424 ApbE family AH4AK4_3201 PF00175 Oxidoreductase NAD-binding domain AH4AK4_3201 PF00111 2Fe-2S iron-sulfur cluster binding domain AH4AK4_3201 PF00970 Oxidoreductase FAD-binding domain AH4AK4_3202 PF02508 Rnf-Nqr subunit, membrane protein AH4AK4_3203 PF02508 Rnf-Nqr subunit, membrane protein AH4AK4_3204 PF04205 FMN-binding domain AH4AK4_3205 PF03116 NQR2, RnfD, RnfE family AH4AK4_3206 PF11973 NQRA C-terminal domain AH4AK4_3206 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AH4AK4_3207 PF01722 BolA-like protein AH4AK4_3208 PF05175 Methyltransferase small domain AH4AK4_3210 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AH4AK4_3212 PF07690 Major Facilitator Superfamily AH4AK4_3213 PF03502 Nucleoside-specific channel-forming protein, Tsx AH4AK4_3214 PF04461 Protein of unknown function (DUF520) AH4AK4_3215 PF02558 Ketopantoate reductase PanE/ApbA AH4AK4_3215 PF08546 Ketopantoate reductase PanE/ApbA C terminal AH4AK4_3216 PF01965 DJ-1/PfpI family AH4AK4_3217 PF00205 Thiamine pyrophosphate enzyme, central domain AH4AK4_3217 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AH4AK4_3217 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AH4AK4_3218 PF03306 Alpha-acetolactate decarboxylase AH4AK4_3219 PF03466 LysR substrate binding domain AH4AK4_3219 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_3223 PF04717 Type VI secretion system, phage-baseplate injector AH4AK4_3224 PF05638 Type VI secretion system effector, Hcp AH4AK4_3225 PF00196 Bacterial regulatory proteins, luxR family AH4AK4_3225 PF03472 Autoinducer binding domain AH4AK4_3228 PF03960 ArsC family AH4AK4_3229 PF01758 Sodium Bile acid symporter family AH4AK4_3231 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AH4AK4_3231 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AH4AK4_3233 PF02374 Anion-transporting ATPase AH4AK4_3234 PF06953 Arsenical resistance operon trans-acting repressor ArsD AH4AK4_3238 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_3238 PF00672 HAMP domain AH4AK4_3238 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_3239 PF00072 Response regulator receiver domain AH4AK4_3239 PF00486 Transcriptional regulatory protein, C terminal AH4AK4_3240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AH4AK4_3240 PF00529 HlyD membrane-fusion protein of T1SS AH4AK4_3241 PF00873 AcrB/AcrD/AcrF family AH4AK4_3242 PF07690 Major Facilitator Superfamily AH4AK4_3244 PF06965 Na+/H+ antiporter 1 AH4AK4_3244 PF13462 Thioredoxin AH4AK4_3245 PF16363 GDP-mannose 4,6 dehydratase AH4AK4_3246 PF00111 2Fe-2S iron-sulfur cluster binding domain AH4AK4_3246 PF00175 Oxidoreductase NAD-binding domain AH4AK4_3246 PF00970 Oxidoreductase FAD-binding domain AH4AK4_3247 PF03063 Prismane/CO dehydrogenase family AH4AK4_3248 PF00210 Ferritin-like domain AH4AK4_3256 PF00106 short chain dehydrogenase AH4AK4_3258 PF03441 FAD binding domain of DNA photolyase AH4AK4_3258 PF00875 DNA photolyase AH4AK4_3259 PF13411 MerR HTH family regulatory protein AH4AK4_3260 PF08349 Protein of unknown function (DUF1722) AH4AK4_3266 PF00800 Prephenate dehydratase AH4AK4_3266 PF01817 Chorismate mutase type II AH4AK4_3271 PF00529 HlyD membrane-fusion protein of T1SS AH4AK4_3271 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AH4AK4_3272 PF00005 ABC transporter AH4AK4_3272 PF00664 ABC transporter transmembrane region AH4AK4_3274 PF13181 Tetratricopeptide repeat AH4AK4_3276 PF03976 Polyphosphate kinase 2 (PPK2) AH4AK4_3277 PF00916 Sulfate permease family AH4AK4_3277 PF01740 STAS domain AH4AK4_3278 PF07995 Glucose / Sorbosone dehydrogenase AH4AK4_3280 PF08220 DeoR-like helix-turn-helix domain AH4AK4_3280 PF00455 DeoR C terminal sensor domain AH4AK4_3281 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AH4AK4_3281 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AH4AK4_3282 PF17042 Nucleotide-binding C-terminal domain AH4AK4_3282 PF07005 Sugar-binding N-terminal domain AH4AK4_3283 PF00596 Class II Aldolase and Adducin N-terminal domain AH4AK4_3284 PF01261 Xylose isomerase-like TIM barrel AH4AK4_3285 PF01370 NAD dependent epimerase/dehydratase family AH4AK4_3286 PF02447 GntP family permease AH4AK4_3288 PF02743 Cache domain AH4AK4_3288 PF00672 HAMP domain AH4AK4_3288 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_3289 PF03573 outer membrane porin, OprD family AH4AK4_3291 PF00106 short chain dehydrogenase AH4AK4_3296 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AH4AK4_3297 PF12833 Helix-turn-helix domain AH4AK4_3297 PF00730 HhH-GPD superfamily base excision DNA repair protein AH4AK4_3297 PF06029 AlkA N-terminal domain AH4AK4_3297 PF02805 Metal binding domain of Ada AH4AK4_3298 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AH4AK4_3298 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AH4AK4_3300 PF06906 Protein of unknown function (DUF1272) AH4AK4_3302 PF01136 Peptidase family U32 AH4AK4_3302 PF12392 Collagenase AH4AK4_3304 PF01810 LysE type translocator AH4AK4_3305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_3305 PF03466 LysR substrate binding domain AH4AK4_3306 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AH4AK4_3306 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AH4AK4_3311 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_3311 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_3311 PF00989 PAS fold AH4AK4_3311 PF00072 Response regulator receiver domain AH4AK4_3311 PF00497 Bacterial extracellular solute-binding proteins, family 3 AH4AK4_3311 PF01627 Hpt domain AH4AK4_3312 PF00072 Response regulator receiver domain AH4AK4_3312 PF00196 Bacterial regulatory proteins, luxR family AH4AK4_3314 PF15976 CS1-pili formation C-terminal AH4AK4_3314 PF16967 E-set like domain AH4AK4_3317 PF00989 PAS fold AH4AK4_3317 PF01590 GAF domain AH4AK4_3317 PF00563 EAL domain AH4AK4_3317 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_3319 PF01568 Molydopterin dinucleotide binding domain AH4AK4_3319 PF00384 Molybdopterin oxidoreductase AH4AK4_3319 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AH4AK4_3320 PF03916 Polysulphide reductase, NrfD AH4AK4_3321 PF13247 4Fe-4S dicluster domain AH4AK4_3322 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_3322 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_3322 PF00989 PAS fold AH4AK4_3323 PF00196 Bacterial regulatory proteins, luxR family AH4AK4_3323 PF00072 Response regulator receiver domain AH4AK4_3324 PF03575 Peptidase family S51 AH4AK4_3325 PF10415 Fumarase C C-terminus AH4AK4_3325 PF00206 Lyase AH4AK4_3327 PF14850 DNA-binding domain of Proline dehydrogenase AH4AK4_3327 PF01619 Proline dehydrogenase AH4AK4_3327 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AH4AK4_3327 PF00171 Aldehyde dehydrogenase family AH4AK4_3328 PF01168 Alanine racemase, N-terminal domain AH4AK4_3328 PF00842 Alanine racemase, C-terminal domain AH4AK4_3329 PF00772 DnaB-like helicase N terminal domain AH4AK4_3329 PF03796 DnaB-like helicase C terminal domain AH4AK4_3332 PF02872 5'-nucleotidase, C-terminal domain AH4AK4_3332 PF00149 Calcineurin-like phosphoesterase AH4AK4_3336 PF02954 Bacterial regulatory protein, Fis family AH4AK4_3336 PF00158 Sigma-54 interaction domain AH4AK4_3336 PF00072 Response regulator receiver domain AH4AK4_3337 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AH4AK4_3337 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AH4AK4_3339 PF04102 SlyX AH4AK4_3340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AH4AK4_3341 PF09526 Probable metal-binding protein (DUF2387) AH4AK4_3343 PF01584 CheW-like domain AH4AK4_3343 PF00072 Response regulator receiver domain AH4AK4_3344 PF00561 alpha/beta hydrolase fold AH4AK4_3345 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_3345 PF01590 GAF domain AH4AK4_3345 PF00360 Phytochrome region AH4AK4_3345 PF00563 EAL domain AH4AK4_3346 PF06794 Uncharacterised protein family (UPF0270) AH4AK4_3347 PF00485 Phosphoribulokinase / Uridine kinase family AH4AK4_3350 PF02566 OsmC-like protein AH4AK4_3351 PF00027 Cyclic nucleotide-binding domain AH4AK4_3351 PF13545 Crp-like helix-turn-helix domain AH4AK4_3352 PF08241 Methyltransferase domain AH4AK4_3353 PF17945 Beta/Gamma crystallin AH4AK4_3353 PF12561 ToxR activated gene A lipoprotein domain AH4AK4_3354 PF00704 Glycosyl hydrolases family 18 AH4AK4_3354 PF08329 Chitinase A, N-terminal domain AH4AK4_3355 PF08329 Chitinase A, N-terminal domain AH4AK4_3355 PF00704 Glycosyl hydrolases family 18 AH4AK4_3356 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_3356 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_3357 PF12832 MFS_1 like family AH4AK4_3358 PF00593 TonB dependent receptor AH4AK4_3358 PF07715 TonB-dependent Receptor Plug Domain AH4AK4_3362 PF01243 Pyridoxamine 5'-phosphate oxidase AH4AK4_3363 PF06228 Haem utilisation ChuX/HutX AH4AK4_3365 PF01032 FecCD transport family AH4AK4_3366 PF00005 ABC transporter AH4AK4_3369 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AH4AK4_3369 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AH4AK4_3369 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AH4AK4_3370 PF01370 NAD dependent epimerase/dehydratase family AH4AK4_3371 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AH4AK4_3373 PF00535 Glycosyl transferase family 2 AH4AK4_3375 PF01464 Transglycosylase SLT domain AH4AK4_3376 PF00005 ABC transporter AH4AK4_3376 PF12848 ABC transporter AH4AK4_3378 PF00860 Permease family AH4AK4_3379 PF00226 DnaJ domain AH4AK4_3379 PF05099 Tellurite resistance protein TerB AH4AK4_3380 PF00483 Nucleotidyl transferase AH4AK4_3381 PF01636 Phosphotransferase enzyme family AH4AK4_3382 PF04453 LPS transport system D AH4AK4_3382 PF03968 OstA-like protein AH4AK4_3383 PF09312 SurA N-terminal domain AH4AK4_3383 PF00639 PPIC-type PPIASE domain AH4AK4_3384 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AH4AK4_3385 PF00398 Ribosomal RNA adenine dimethylase AH4AK4_3386 PF04379 ApaG domain AH4AK4_3387 PF00149 Calcineurin-like phosphoesterase AH4AK4_3390 PF00296 Luciferase-like monooxygenase AH4AK4_3391 PF01966 HD domain AH4AK4_3393 PF01926 50S ribosome-binding GTPase AH4AK4_3393 PF01018 GTP1/OBG AH4AK4_3394 PF01016 Ribosomal L27 protein AH4AK4_3395 PF00348 Polyprenyl synthetase AH4AK4_3396 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AH4AK4_3397 PF01145 SPFH domain / Band 7 family AH4AK4_3398 PF01145 SPFH domain / Band 7 family AH4AK4_3398 PF12221 Bacterial membrane protein N terminal AH4AK4_3399 PF01926 50S ribosome-binding GTPase AH4AK4_3399 PF16360 GTP-binding GTPase Middle Region AH4AK4_3399 PF13167 GTP-binding GTPase N-terminal AH4AK4_3400 PF17209 Hfq protein AH4AK4_3402 PF01119 DNA mismatch repair protein, C-terminal domain AH4AK4_3402 PF08676 MutL C terminal dimerisation domain AH4AK4_3403 PF01520 N-acetylmuramoyl-L-alanine amidase AH4AK4_3404 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AH4AK4_3405 PF03853 YjeF-related protein N-terminus AH4AK4_3405 PF01256 Carbohydrate kinase AH4AK4_3406 PF08331 Domain of unknown function (DUF1730) AH4AK4_3407 PF00480 ROK family AH4AK4_3410 PF00005 ABC transporter AH4AK4_3410 PF09383 NIL domain AH4AK4_3411 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_3412 PF03180 NLPA lipoprotein AH4AK4_3413 PF02357 Transcription termination factor nusG AH4AK4_3414 PF00672 HAMP domain AH4AK4_3414 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_3415 PF03707 Bacterial signalling protein N terminal repeat AH4AK4_3415 PF00563 EAL domain AH4AK4_3415 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_3416 PF09456 RcsC Alpha-Beta-Loop (ABL) AH4AK4_3416 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_3416 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_3416 PF00072 Response regulator receiver domain AH4AK4_3418 PF01966 HD domain AH4AK4_3418 PF13286 Phosphohydrolase-associated domain AH4AK4_3419 PF00072 Response regulator receiver domain AH4AK4_3419 PF00989 PAS fold AH4AK4_3419 PF01627 Hpt domain AH4AK4_3419 PF18415 Histidine kinase receptor ArcB trans-membrane domain AH4AK4_3419 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_3419 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_3424 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_3424 PF03466 LysR substrate binding domain AH4AK4_3426 PF01259 SAICAR synthetase AH4AK4_3427 PF06804 NlpB/DapX lipoprotein AH4AK4_3428 PF00701 Dihydrodipicolinate synthetase family AH4AK4_3429 PF01842 ACT domain AH4AK4_3430 PF00578 AhpC/TSA family AH4AK4_3431 PF03887 YfbU domain AH4AK4_3432 PF04217 Protein of unknown function, DUF412 AH4AK4_3433 PF00871 Acetokinase family AH4AK4_3434 PF01515 Phosphate acetyl/butaryl transferase AH4AK4_3434 PF07085 DRTGG domain AH4AK4_3435 PF10369 Small subunit of acetolactate synthase AH4AK4_3436 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AH4AK4_3436 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AH4AK4_3436 PF00205 Thiamine pyrophosphate enzyme, central domain AH4AK4_3438 PF04101 Glycosyltransferase family 28 C-terminal domain AH4AK4_3438 PF03033 Glycosyltransferase family 28 N-terminal domain AH4AK4_3439 PF01569 PAP2 superfamily AH4AK4_3441 PF00682 HMGL-like AH4AK4_3441 PF08502 LeuA allosteric (dimerisation) domain AH4AK4_3442 PF00180 Isocitrate/isopropylmalate dehydrogenase AH4AK4_3443 PF00330 Aconitase family (aconitate hydratase) AH4AK4_3444 PF00694 Aconitase C-terminal domain AH4AK4_3448 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_3449 PF00005 ABC transporter AH4AK4_3450 PF13638 PIN domain AH4AK4_3450 PF02562 PhoH-like protein AH4AK4_3452 PF00317 Ribonucleotide reductase, all-alpha domain AH4AK4_3452 PF02867 Ribonucleotide reductase, barrel domain AH4AK4_3452 PF08343 Ribonucleotide reductase N-terminal AH4AK4_3458 PF01521 Iron-sulphur cluster biosynthesis AH4AK4_3460 PF00654 Voltage gated chloride channel AH4AK4_3462 PF00202 Aminotransferase class-III AH4AK4_3466 PF01569 PAP2 superfamily AH4AK4_3468 PF03466 LysR substrate binding domain AH4AK4_3468 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_3469 PF00893 Small Multidrug Resistance protein AH4AK4_3470 PF00893 Small Multidrug Resistance protein AH4AK4_3471 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AH4AK4_3472 PF00912 Transglycosylase AH4AK4_3472 PF00905 Penicillin binding protein transpeptidase domain AH4AK4_3472 PF14814 Bifunctional transglycosylase second domain AH4AK4_3473 PF08482 ATP-dependent helicase C-terminal AH4AK4_3473 PF00271 Helicase conserved C-terminal domain AH4AK4_3473 PF04408 Helicase associated domain (HA2) AH4AK4_3473 PF00270 DEAD/DEAH box helicase AH4AK4_3475 PF17746 SfsA N-terminal OB domain AH4AK4_3475 PF03749 Sugar fermentation stimulation protein RE domain AH4AK4_3476 PF01258 Prokaryotic dksA/traR C4-type zinc finger AH4AK4_3477 PF00749 tRNA synthetases class I (E and Q), catalytic domain AH4AK4_3479 PF12627 Probable RNA and SrmB- binding site of polymerase A AH4AK4_3479 PF01743 Poly A polymerase head domain AH4AK4_3479 PF12626 Polymerase A arginine-rich C-terminus AH4AK4_3480 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AH4AK4_3481 PF02548 Ketopantoate hydroxymethyltransferase AH4AK4_3482 PF02569 Pantoate-beta-alanine ligase AH4AK4_3484 PF01061 ABC-2 type transporter AH4AK4_3485 PF00005 ABC transporter AH4AK4_3486 PF00156 Phosphoribosyl transferase domain AH4AK4_3487 PF00440 Bacterial regulatory proteins, tetR family AH4AK4_3488 PF02441 Flavoprotein AH4AK4_3489 PF01225 Mur ligase family, catalytic domain AH4AK4_3489 PF02875 Mur ligase family, glutamate ligase domain AH4AK4_3489 PF08245 Mur ligase middle domain AH4AK4_3490 PF00719 Inorganic pyrophosphatase AH4AK4_3493 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AH4AK4_3496 PF00005 ABC transporter AH4AK4_3500 PF12729 Four helix bundle sensory module for signal transduction AH4AK4_3500 PF00672 HAMP domain AH4AK4_3500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_3502 PF01553 Acyltransferase AH4AK4_3504 PF03600 Citrate transporter AH4AK4_3504 PF02080 TrkA-C domain AH4AK4_3505 PF00009 Elongation factor Tu GTP binding domain AH4AK4_3506 PF01507 Phosphoadenosine phosphosulfate reductase family AH4AK4_3507 PF14824 Sirohaem biosynthesis protein central AH4AK4_3507 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AH4AK4_3507 PF10414 Sirohaem synthase dimerisation region AH4AK4_3508 PF01145 SPFH domain / Band 7 family AH4AK4_3508 PF16200 C-terminal region of band_7 AH4AK4_3509 PF01957 NfeD-like C-terminal, partner-binding AH4AK4_3511 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AH4AK4_3511 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AH4AK4_3512 PF07690 Major Facilitator Superfamily AH4AK4_3513 PF01725 Ham1 family AH4AK4_3514 PF06969 HemN C-terminal domain AH4AK4_3514 PF04055 Radical SAM superfamily AH4AK4_3515 PF03889 Alternative ribosome-rescue factor A AH4AK4_3517 PF13411 MerR HTH family regulatory protein AH4AK4_3519 PF02142 MGS-like domain AH4AK4_3519 PF01808 AICARFT/IMPCHase bienzyme AH4AK4_3520 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AH4AK4_3520 PF02843 Phosphoribosylglycinamide synthetase, C domain AH4AK4_3520 PF02844 Phosphoribosylglycinamide synthetase, N domain AH4AK4_3523 PF00128 Alpha amylase, catalytic domain AH4AK4_3526 PF04542 Sigma-70 region 2 AH4AK4_3526 PF00140 Sigma-70 factor, region 1.2 AH4AK4_3526 PF03979 Sigma-70 factor, region 1.1 AH4AK4_3526 PF04539 Sigma-70 region 3 AH4AK4_3526 PF04545 Sigma-70, region 4 AH4AK4_3526 PF04546 Sigma-70, non-essential region AH4AK4_3527 PF08275 DNA primase catalytic core, N-terminal domain AH4AK4_3527 PF08278 DNA primase DnaG DnaB-binding AH4AK4_3527 PF01807 CHC2 zinc finger AH4AK4_3527 PF10410 DnaB-helicase binding domain of primase AH4AK4_3528 PF09424 Yqey-like protein AH4AK4_3529 PF01165 Ribosomal protein S21 AH4AK4_3530 PF00814 Glycoprotease family AH4AK4_3531 PF00140 Sigma-70 factor, region 1.2 AH4AK4_3531 PF04542 Sigma-70 region 2 AH4AK4_3531 PF04539 Sigma-70 region 3 AH4AK4_3531 PF04545 Sigma-70, region 4 AH4AK4_3532 PF01476 LysM domain AH4AK4_3532 PF01551 Peptidase family M23 AH4AK4_3533 PF09335 SNARE associated Golgi protein AH4AK4_3535 PF01975 Survival protein SurE AH4AK4_3536 PF01142 tRNA pseudouridine synthase D (TruD) AH4AK4_3537 PF02542 YgbB family AH4AK4_3538 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AH4AK4_3539 PF04977 Septum formation initiator AH4AK4_3540 PF00113 Enolase, C-terminal TIM barrel domain AH4AK4_3540 PF03952 Enolase, N-terminal domain AH4AK4_3541 PF00117 Glutamine amidotransferase class-I AH4AK4_3541 PF06418 CTP synthase N-terminus AH4AK4_3542 PF03819 MazG nucleotide pyrophosphohydrolase domain AH4AK4_3543 PF04607 Region found in RelA / SpoT proteins AH4AK4_3543 PF02824 TGS domain AH4AK4_3543 PF13291 ACT domain AH4AK4_3544 PF05958 tRNA (Uracil-5-)-methyltransferase AH4AK4_3544 PF01938 TRAM domain AH4AK4_3545 PF00672 HAMP domain AH4AK4_3545 PF01627 Hpt domain AH4AK4_3545 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AH4AK4_3545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_3545 PF00072 Response regulator receiver domain AH4AK4_3545 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_3546 PF07308 Protein of unknown function (DUF1456) AH4AK4_3547 PF01510 N-acetylmuramoyl-L-alanine amidase AH4AK4_3548 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AH4AK4_3549 PF11967 Recombination protein O N terminal AH4AK4_3549 PF02565 Recombination protein O C terminal AH4AK4_3550 PF01926 50S ribosome-binding GTPase AH4AK4_3550 PF07650 KH domain AH4AK4_3551 PF00035 Double-stranded RNA binding motif AH4AK4_3551 PF14622 Ribonuclease-III-like AH4AK4_3552 PF10502 Signal peptidase, peptidase S26 AH4AK4_3553 PF00009 Elongation factor Tu GTP binding domain AH4AK4_3553 PF00679 Elongation factor G C-terminus AH4AK4_3553 PF03144 Elongation factor Tu domain 2 AH4AK4_3553 PF06421 GTP-binding protein LepA C-terminus AH4AK4_3555 PF17188 MucB/RseB C-terminal domain AH4AK4_3555 PF03888 MucB/RseB N-terminal domain AH4AK4_3556 PF03872 Anti sigma-E protein RseA, N-terminal domain AH4AK4_3556 PF03873 Anti sigma-E protein RseA, C-terminal domain AH4AK4_3557 PF08281 Sigma-70, region 4 AH4AK4_3557 PF04542 Sigma-70 region 2 AH4AK4_3558 PF00890 FAD binding domain AH4AK4_3558 PF02910 Fumarate reductase flavoprotein C-term AH4AK4_3560 PF03937 Flavinator of succinate dehydrogenase AH4AK4_3561 PF01571 Aminomethyltransferase folate-binding domain AH4AK4_3562 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_3562 PF03466 LysR substrate binding domain AH4AK4_3565 PF03091 CutA1 divalent ion tolerance protein AH4AK4_3566 PF02683 Cytochrome C biogenesis protein transmembrane region AH4AK4_3566 PF11412 Disulphide bond corrector protein DsbC AH4AK4_3568 PF01266 FAD dependent oxidoreductase AH4AK4_3569 PF01116 Fructose-bisphosphate aldolase class-II AH4AK4_3570 PF00162 Phosphoglycerate kinase AH4AK4_3571 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AH4AK4_3571 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AH4AK4_3572 PF00480 ROK family AH4AK4_3573 PF01208 Uroporphyrinogen decarboxylase (URO-D) AH4AK4_3574 PF00293 NUDIX domain AH4AK4_3574 PF09297 NADH pyrophosphatase zinc ribbon domain AH4AK4_3575 PF08239 Bacterial SH3 domain AH4AK4_3576 PF00520 Ion transport protein AH4AK4_3576 PF00027 Cyclic nucleotide-binding domain AH4AK4_3577 PF00672 HAMP domain AH4AK4_3577 PF02743 Cache domain AH4AK4_3577 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_3579 PF08335 GlnD PII-uridylyltransferase AH4AK4_3579 PF03710 Glutamate-ammonia ligase adenylyltransferase AH4AK4_3582 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AH4AK4_3582 PF00326 Prolyl oligopeptidase family AH4AK4_3583 PF00291 Pyridoxal-phosphate dependent enzyme AH4AK4_3584 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_3585 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_3586 PF00005 ABC transporter AH4AK4_3587 PF00497 Bacterial extracellular solute-binding proteins, family 3 AH4AK4_3588 PF13194 Domain of unknown function (DUF4010) AH4AK4_3589 PF12464 Maltose acetyltransferase AH4AK4_3589 PF14602 Hexapeptide repeat of succinyl-transferase AH4AK4_3593 PF11999 Protein of unknown function (DUF3494) AH4AK4_3593 PF02368 Bacterial Ig-like domain (group 2) AH4AK4_3599 PF14552 Tautomerase enzyme AH4AK4_3601 PF03466 LysR substrate binding domain AH4AK4_3601 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_3602 PF14698 Argininosuccinate lyase C-terminal AH4AK4_3602 PF00206 Lyase AH4AK4_3603 PF00764 Arginosuccinate synthase AH4AK4_3604 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AH4AK4_3604 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AH4AK4_3605 PF00696 Amino acid kinase family AH4AK4_3606 PF01118 Semialdehyde dehydrogenase, NAD binding domain AH4AK4_3606 PF02774 Semialdehyde dehydrogenase, dimerisation domain AH4AK4_3607 PF07687 Peptidase dimerisation domain AH4AK4_3607 PF01546 Peptidase family M20/M25/M40 AH4AK4_3608 PF00311 Phosphoenolpyruvate carboxylase AH4AK4_3610 PF13426 PAS domain AH4AK4_3610 PF05231 MASE1 AH4AK4_3610 PF08447 PAS fold AH4AK4_3610 PF08448 PAS fold AH4AK4_3610 PF00563 EAL domain AH4AK4_3610 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_3611 PF04073 Aminoacyl-tRNA editing domain AH4AK4_3615 PF00392 Bacterial regulatory proteins, gntR family AH4AK4_3615 PF00155 Aminotransferase class I and II AH4AK4_3617 PF03466 LysR substrate binding domain AH4AK4_3617 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_3618 PF03788 LrgA family AH4AK4_3619 PF04172 LrgB-like family AH4AK4_3620 PF03447 Homoserine dehydrogenase, NAD binding domain AH4AK4_3620 PF00742 Homoserine dehydrogenase AH4AK4_3620 PF00696 Amino acid kinase family AH4AK4_3621 PF01053 Cys/Met metabolism PLP-dependent enzyme AH4AK4_3622 PF01340 Met Apo-repressor, MetJ AH4AK4_3623 PF02311 AraC-like ligand binding domain AH4AK4_3623 PF12833 Helix-turn-helix domain AH4AK4_3624 PF01588 Putative tRNA binding domain AH4AK4_3625 PF03222 Tryptophan/tyrosine permease family AH4AK4_3626 PF00459 Inositol monophosphatase family AH4AK4_3627 PF00293 NUDIX domain AH4AK4_3628 PF13419 Haloacid dehalogenase-like hydrolase AH4AK4_3629 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AH4AK4_3629 PF07992 Pyridine nucleotide-disulphide oxidoreductase AH4AK4_3630 PF03466 LysR substrate binding domain AH4AK4_3630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_3631 PF01479 S4 domain AH4AK4_3631 PF00579 tRNA synthetases class I (W and Y) AH4AK4_3632 PF00196 Bacterial regulatory proteins, luxR family AH4AK4_3633 PF01203 Type II secretion system (T2SS), protein N AH4AK4_3634 PF04612 Type II secretion system (T2SS), protein M AH4AK4_3635 PF05134 Type II secretion system (T2SS), protein L AH4AK4_3635 PF12693 GspL periplasmic domain AH4AK4_3636 PF03934 Type II secretion system (T2SS), protein K AH4AK4_3637 PF11612 Type II secretion system (T2SS), protein J AH4AK4_3637 PF07963 Prokaryotic N-terminal methylation motif AH4AK4_3638 PF07963 Prokaryotic N-terminal methylation motif AH4AK4_3638 PF02501 Type II secretion system (T2SS), protein I AH4AK4_3639 PF12019 Type II transport protein GspH AH4AK4_3639 PF07963 Prokaryotic N-terminal methylation motif AH4AK4_3640 PF08334 Type II secretion system (T2SS), protein G AH4AK4_3640 PF07963 Prokaryotic N-terminal methylation motif AH4AK4_3641 PF00482 Type II secretion system (T2SS), protein F AH4AK4_3642 PF00437 Type II/IV secretion system protein AH4AK4_3643 PF03958 Bacterial type II/III secretion system short domain AH4AK4_3643 PF00263 Bacterial type II and III secretion system protein AH4AK4_3644 PF11356 Type II secretion system protein C AH4AK4_3645 PF01479 S4 domain AH4AK4_3646 PF01430 Hsp33 protein AH4AK4_3647 PF01293 Phosphoenolpyruvate carboxykinase AH4AK4_3648 PF00392 Bacterial regulatory proteins, gntR family AH4AK4_3649 PF01321 Creatinase/Prolidase N-terminal domain AH4AK4_3649 PF00557 Metallopeptidase family M24 AH4AK4_3651 PF05433 Glycine zipper 2TM domain AH4AK4_3652 PF01928 CYTH domain AH4AK4_3653 PF01865 Protein of unknown function DUF47 AH4AK4_3654 PF01384 Phosphate transporter family AH4AK4_3655 PF01966 HD domain AH4AK4_3655 PF12627 Probable RNA and SrmB- binding site of polymerase A AH4AK4_3655 PF01743 Poly A polymerase head domain AH4AK4_3656 PF01471 Putative peptidoglycan binding domain AH4AK4_3656 PF13401 AAA domain AH4AK4_3657 PF16537 Type II secretion system protein B AH4AK4_3658 PF10576 Iron-sulfur binding domain of endonuclease III AH4AK4_3658 PF00633 Helix-hairpin-helix motif AH4AK4_3658 PF14815 NUDIX domain AH4AK4_3658 PF00730 HhH-GPD superfamily base excision DNA repair protein AH4AK4_3659 PF04362 Bacterial Fe(2+) trafficking AH4AK4_3661 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AH4AK4_3661 PF01464 Transglycosylase SLT domain AH4AK4_3663 PF00657 GDSL-like Lipase/Acylhydrolase AH4AK4_3664 PF01389 OmpA-like transmembrane domain AH4AK4_3664 PF00691 OmpA family AH4AK4_3665 PF03886 ABC-type transport auxiliary lipoprotein component AH4AK4_3666 PF02470 MlaD protein AH4AK4_3667 PF04403 Paraquat-inducible protein A AH4AK4_3669 PF17209 Hfq protein AH4AK4_3670 PF13419 Haloacid dehalogenase-like hydrolase AH4AK4_3671 PF00563 EAL domain AH4AK4_3671 PF00360 Phytochrome region AH4AK4_3671 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_3671 PF01590 GAF domain AH4AK4_3672 PF00701 Dihydrodipicolinate synthetase family AH4AK4_3673 PF08468 Methyltransferase small domain N-terminal AH4AK4_3673 PF05175 Methyltransferase small domain AH4AK4_3674 PF00483 Nucleotidyl transferase AH4AK4_3675 PF08323 Starch synthase catalytic domain AH4AK4_3675 PF00534 Glycosyl transferases group 1 AH4AK4_3682 PF03553 Na+/H+ antiporter family AH4AK4_3683 PF03466 LysR substrate binding domain AH4AK4_3683 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_3684 PF13416 Bacterial extracellular solute-binding protein AH4AK4_3685 PF00005 ABC transporter AH4AK4_3685 PF08402 TOBE domain AH4AK4_3686 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_3687 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_3688 PF00171 Aldehyde dehydrogenase family AH4AK4_3689 PF01040 UbiA prenyltransferase family AH4AK4_3694 PF00510 Cytochrome c oxidase subunit III AH4AK4_3696 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AH4AK4_3697 PF00115 Cytochrome C and Quinol oxidase polypeptide I AH4AK4_3698 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AH4AK4_3698 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AH4AK4_3699 PF17176 tRNA-binding domain AH4AK4_3699 PF05127 Helicase AH4AK4_3699 PF13718 GNAT acetyltransferase 2 AH4AK4_3699 PF08351 Domain of unknown function (DUF1726) AH4AK4_3702 PF00210 Ferritin-like domain AH4AK4_3703 PF02142 MGS-like domain AH4AK4_3706 PF00710 Asparaginase, N-terminal AH4AK4_3706 PF17763 Glutaminase/Asparaginase C-terminal domain AH4AK4_3708 PF00356 Bacterial regulatory proteins, lacI family AH4AK4_3711 PF00480 ROK family AH4AK4_3712 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AH4AK4_3713 PF00232 Glycosyl hydrolase family 1 AH4AK4_3714 PF02378 Phosphotransferase system, EIIC AH4AK4_3714 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AH4AK4_3715 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AH4AK4_3716 PF02378 Phosphotransferase system, EIIC AH4AK4_3718 PF00356 Bacterial regulatory proteins, lacI family AH4AK4_3719 PF00367 phosphotransferase system, EIIB AH4AK4_3719 PF02378 Phosphotransferase system, EIIC AH4AK4_3720 PF00128 Alpha amylase, catalytic domain AH4AK4_3720 PF11941 Domain of unknown function (DUF3459) AH4AK4_3721 PF14602 Hexapeptide repeat of succinyl-transferase AH4AK4_3721 PF12464 Maltose acetyltransferase AH4AK4_3722 PF01037 Lrp/AsnC ligand binding domain AH4AK4_3723 PF00892 EamA-like transporter family AH4AK4_3728 PF00691 OmpA family AH4AK4_3728 PF01389 OmpA-like transmembrane domain AH4AK4_3733 PF02660 Glycerol-3-phosphate acyltransferase AH4AK4_3734 PF02152 Dihydroneopterin aldolase AH4AK4_3735 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AH4AK4_3736 PF00672 HAMP domain AH4AK4_3736 PF12729 Four helix bundle sensory module for signal transduction AH4AK4_3736 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_3737 PF07690 Major Facilitator Superfamily AH4AK4_3738 PF07683 Cobalamin synthesis protein cobW C-terminal domain AH4AK4_3738 PF02492 CobW/HypB/UreG, nucleotide-binding domain AH4AK4_3740 PF01810 LysE type translocator AH4AK4_3741 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_3741 PF03466 LysR substrate binding domain AH4AK4_3742 PF03466 LysR substrate binding domain AH4AK4_3742 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_3744 PF00563 EAL domain AH4AK4_3744 PF12792 CSS motif domain associated with EAL AH4AK4_3745 PF12792 CSS motif domain associated with EAL AH4AK4_3745 PF00563 EAL domain AH4AK4_3746 PF00330 Aconitase family (aconitate hydratase) AH4AK4_3746 PF11791 Aconitate B N-terminal domain AH4AK4_3746 PF06434 Aconitate hydratase 2 N-terminus AH4AK4_3747 PF01734 Patatin-like phospholipase AH4AK4_3748 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_3748 PF00672 HAMP domain AH4AK4_3748 PF12729 Four helix bundle sensory module for signal transduction AH4AK4_3749 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_3749 PF00672 HAMP domain AH4AK4_3749 PF12729 Four helix bundle sensory module for signal transduction AH4AK4_3751 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_3751 PF00563 EAL domain AH4AK4_3751 PF13426 PAS domain AH4AK4_3751 PF08448 PAS fold AH4AK4_3751 PF08447 PAS fold AH4AK4_3751 PF05231 MASE1 AH4AK4_3752 PF07992 Pyridine nucleotide-disulphide oxidoreductase AH4AK4_3752 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AH4AK4_3753 PF00364 Biotin-requiring enzyme AH4AK4_3753 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AH4AK4_3753 PF02817 e3 binding domain AH4AK4_3754 PF00456 Transketolase, thiamine diphosphate binding domain AH4AK4_3754 PF17831 Pyruvate dehydrogenase E1 component middle domain AH4AK4_3755 PF07729 FCD domain AH4AK4_3755 PF00392 Bacterial regulatory proteins, gntR family AH4AK4_3756 PF01510 N-acetylmuramoyl-L-alanine amidase AH4AK4_3758 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AH4AK4_3758 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AH4AK4_3759 PF00437 Type II/IV secretion system protein AH4AK4_3759 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AH4AK4_3760 PF00482 Type II secretion system (T2SS), protein F AH4AK4_3761 PF06750 Bacterial Peptidase A24 N-terminal domain AH4AK4_3761 PF01478 Type IV leader peptidase family AH4AK4_3762 PF01121 Dephospho-CoA kinase AH4AK4_3763 PF07072 Cell division protein AH4AK4_3764 PF03884 DNA gyrase inhibitor YacG AH4AK4_3765 PF00293 NUDIX domain AH4AK4_3766 PF02810 SEC-C motif AH4AK4_3766 PF07517 SecA DEAD-like domain AH4AK4_3766 PF01043 SecA preprotein cross-linking domain AH4AK4_3766 PF07516 SecA Wing and Scaffold domain AH4AK4_3768 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AH4AK4_3769 PF00091 Tubulin/FtsZ family, GTPase domain AH4AK4_3769 PF12327 FtsZ family, C-terminal domain AH4AK4_3770 PF02491 SHS2 domain inserted in FTSA AH4AK4_3771 PF03799 Cell division protein FtsQ AH4AK4_3771 PF08478 POTRA domain, FtsQ-type AH4AK4_3772 PF01225 Mur ligase family, catalytic domain AH4AK4_3772 PF08245 Mur ligase middle domain AH4AK4_3772 PF02875 Mur ligase family, glutamate ligase domain AH4AK4_3773 PF03033 Glycosyltransferase family 28 N-terminal domain AH4AK4_3773 PF04101 Glycosyltransferase family 28 C-terminal domain AH4AK4_3774 PF01098 Cell cycle protein AH4AK4_3775 PF08245 Mur ligase middle domain AH4AK4_3775 PF02875 Mur ligase family, glutamate ligase domain AH4AK4_3776 PF00953 Glycosyl transferase family 4 AH4AK4_3776 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AH4AK4_3777 PF02875 Mur ligase family, glutamate ligase domain AH4AK4_3777 PF08245 Mur ligase middle domain AH4AK4_3777 PF01225 Mur ligase family, catalytic domain AH4AK4_3778 PF01225 Mur ligase family, catalytic domain AH4AK4_3778 PF02875 Mur ligase family, glutamate ligase domain AH4AK4_3778 PF08245 Mur ligase middle domain AH4AK4_3779 PF00905 Penicillin binding protein transpeptidase domain AH4AK4_3779 PF03717 Penicillin-binding Protein dimerisation domain AH4AK4_3780 PF04999 Cell division protein FtsL AH4AK4_3781 PF01795 MraW methylase family AH4AK4_3782 PF02381 MraZ protein, putative antitoxin-like AH4AK4_3784 PF01464 Transglycosylase SLT domain AH4AK4_3784 PF01476 LysM domain AH4AK4_3785 PF00691 OmpA family AH4AK4_3785 PF13677 Membrane MotB of proton-channel complex MotA/MotB AH4AK4_3786 PF01618 MotA/TolQ/ExbB proton channel family AH4AK4_3787 PF04542 Sigma-70 region 2 AH4AK4_3787 PF04545 Sigma-70, region 4 AH4AK4_3791 PF02561 Flagellar protein FliS AH4AK4_3792 PF07196 Flagellin hook IN motif AH4AK4_3792 PF02465 Flagellar hook-associated protein 2 N-terminus AH4AK4_3792 PF07195 Flagellar hook-associated protein 2 C-terminus AH4AK4_3793 PF00700 Bacterial flagellin C-terminal helical region AH4AK4_3793 PF00669 Bacterial flagellin N-terminal helical region AH4AK4_3794 PF00700 Bacterial flagellin C-terminal helical region AH4AK4_3794 PF00669 Bacterial flagellin N-terminal helical region AH4AK4_3797 PF00669 Bacterial flagellin N-terminal helical region AH4AK4_3798 PF00460 Flagella basal body rod protein AH4AK4_3798 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AH4AK4_3800 PF02119 Flagellar P-ring protein AH4AK4_3801 PF02107 Flagellar L-ring protein AH4AK4_3802 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AH4AK4_3802 PF00460 Flagella basal body rod protein AH4AK4_3803 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AH4AK4_3803 PF00460 Flagella basal body rod protein AH4AK4_3804 PF00460 Flagella basal body rod protein AH4AK4_3804 PF07559 Flagellar basal body protein FlaE AH4AK4_3804 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AH4AK4_3805 PF13860 FlgD Ig-like domain AH4AK4_3805 PF03963 Flagellar hook capping protein - N-terminal region AH4AK4_3805 PF13861 FlgD Tudor-like domain AH4AK4_3806 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AH4AK4_3806 PF00460 Flagella basal body rod protein AH4AK4_3807 PF00460 Flagella basal body rod protein AH4AK4_3812 PF18269 T3SS EscN ATPase C-terminal domain AH4AK4_3812 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AH4AK4_3814 PF14841 FliG middle domain AH4AK4_3814 PF14842 FliG N-terminal domain AH4AK4_3814 PF01706 FliG C-terminal domain AH4AK4_3815 PF08345 Flagellar M-ring protein C-terminal AH4AK4_3815 PF01514 Secretory protein of YscJ/FliF family AH4AK4_3816 PF02049 Flagellar hook-basal body complex protein FliE AH4AK4_3817 PF02954 Bacterial regulatory protein, Fis family AH4AK4_3817 PF00158 Sigma-54 interaction domain AH4AK4_3817 PF00072 Response regulator receiver domain AH4AK4_3818 PF00771 FHIPEP family AH4AK4_3819 PF01312 FlhB HrpN YscU SpaS Family AH4AK4_3820 PF01311 Bacterial export proteins, family 1 AH4AK4_3821 PF01313 Bacterial export proteins, family 3 AH4AK4_3822 PF00813 FliP family AH4AK4_3823 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AH4AK4_3825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AH4AK4_3826 PF04348 LppC putative lipoprotein AH4AK4_3827 PF02021 Uncharacterised protein family UPF0102 AH4AK4_3828 PF13580 SIS domain AH4AK4_3829 PF04972 BON domain AH4AK4_3830 PF04386 Stringent starvation protein B AH4AK4_3831 PF00043 Glutathione S-transferase, C-terminal domain AH4AK4_3831 PF02798 Glutathione S-transferase, N-terminal domain AH4AK4_3832 PF02167 Cytochrome C1 family AH4AK4_3833 PF00032 Cytochrome b(C-terminal)/b6/petD AH4AK4_3833 PF00033 Cytochrome b/b6/petB AH4AK4_3834 PF00355 Rieske [2Fe-2S] domain AH4AK4_3834 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AH4AK4_3835 PF00380 Ribosomal protein S9/S16 AH4AK4_3836 PF00572 Ribosomal protein L13 AH4AK4_3837 PF03969 AFG1-like ATPase AH4AK4_3839 PF13180 PDZ domain AH4AK4_3839 PF00595 PDZ domain AH4AK4_3840 PF13180 PDZ domain AH4AK4_3846 PF01979 Amidohydrolase family AH4AK4_3847 PF03841 L-seryl-tRNA selenium transferase AH4AK4_3848 PF07071 KDGP aldolase AH4AK4_3849 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AH4AK4_3849 PF00874 PRD domain AH4AK4_3849 PF05043 Mga helix-turn-helix domain AH4AK4_3849 PF08279 HTH domain AH4AK4_3850 PF00381 PTS HPr component phosphorylation site AH4AK4_3851 PF03668 P-loop ATPase protein family AH4AK4_3852 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AH4AK4_3853 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AH4AK4_3854 PF04552 Sigma-54, DNA binding domain AH4AK4_3854 PF00309 Sigma-54 factor, Activator interacting domain (AID) AH4AK4_3854 PF04963 Sigma-54 factor, core binding domain AH4AK4_3855 PF00005 ABC transporter AH4AK4_3855 PF12399 Branched-chain amino acid ATP-binding cassette transporter AH4AK4_3856 PF03968 OstA-like protein AH4AK4_3857 PF06835 Lipopolysaccharide-assembly, LptC-related AH4AK4_3859 PF01380 SIS domain AH4AK4_3859 PF00571 CBS domain AH4AK4_3860 PF00005 ABC transporter AH4AK4_3861 PF02405 Permease MlaE AH4AK4_3862 PF02470 MlaD protein AH4AK4_3863 PF05494 MlaC protein AH4AK4_3865 PF01722 BolA-like protein AH4AK4_3866 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AH4AK4_3867 PF01523 Putative modulator of DNA gyrase AH4AK4_3868 PF04751 Protein of unknown function (DUF615) AH4AK4_3870 PF04363 Protein of unknown function (DUF496) AH4AK4_3877 PF01381 Helix-turn-helix AH4AK4_3877 PF07883 Cupin domain AH4AK4_3878 PF03594 Benzoate membrane transport protein AH4AK4_3880 PF02219 Methylenetetrahydrofolate reductase AH4AK4_3883 PF12729 Four helix bundle sensory module for signal transduction AH4AK4_3883 PF00672 HAMP domain AH4AK4_3883 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_3884 PF03922 OmpW family AH4AK4_3886 PF00005 ABC transporter AH4AK4_3886 PF17755 UvrA DNA-binding domain AH4AK4_3886 PF17760 UvrA interaction domain AH4AK4_3887 PF00196 Bacterial regulatory proteins, luxR family AH4AK4_3888 PF00436 Single-strand binding protein family AH4AK4_3892 PF00313 'Cold-shock' DNA-binding domain AH4AK4_3893 PF00593 TonB dependent receptor AH4AK4_3893 PF07715 TonB-dependent Receptor Plug Domain AH4AK4_3894 PF07715 TonB-dependent Receptor Plug Domain AH4AK4_3894 PF00593 TonB dependent receptor AH4AK4_3895 PF00672 HAMP domain AH4AK4_3895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_3895 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_3896 PF00072 Response regulator receiver domain AH4AK4_3896 PF00486 Transcriptional regulatory protein, C terminal AH4AK4_3899 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_3899 PF00672 HAMP domain AH4AK4_3901 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_3901 PF08448 PAS fold AH4AK4_3902 PF00543 Nitrogen regulatory protein P-II AH4AK4_3903 PF00909 Ammonium Transporter Family AH4AK4_3906 PF00440 Bacterial regulatory proteins, tetR family AH4AK4_3907 PF00561 alpha/beta hydrolase fold AH4AK4_3908 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AH4AK4_3911 PF13538 UvrD-like helicase C-terminal domain AH4AK4_3912 PF00580 UvrD/REP helicase N-terminal domain AH4AK4_3912 PF12705 PD-(D/E)XK nuclease superfamily AH4AK4_3912 PF13361 UvrD-like helicase C-terminal domain AH4AK4_3913 PF17946 RecC C-terminal domain AH4AK4_3914 PF07681 DoxX AH4AK4_3915 PF02678 Pirin AH4AK4_3915 PF17954 Quercetinase C-terminal cupin domain AH4AK4_3917 PF03466 LysR substrate binding domain AH4AK4_3917 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_3919 PF07702 UTRA domain AH4AK4_3919 PF00392 Bacterial regulatory proteins, gntR family AH4AK4_3922 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_3924 PF00005 ABC transporter AH4AK4_3924 PF08402 TOBE domain AH4AK4_3926 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_3926 PF07694 5TMR of 5TMR-LYT AH4AK4_3929 PF12833 Helix-turn-helix domain AH4AK4_3929 PF06719 AraC-type transcriptional regulator N-terminus AH4AK4_3930 PF00583 Acetyltransferase (GNAT) family AH4AK4_3931 PF06628 Catalase-related immune-responsive AH4AK4_3931 PF00199 Catalase AH4AK4_3935 PF01569 PAP2 superfamily AH4AK4_3936 PF01594 AI-2E family transporter AH4AK4_3937 PF00106 short chain dehydrogenase AH4AK4_3939 PF02954 Bacterial regulatory protein, Fis family AH4AK4_3939 PF00158 Sigma-54 interaction domain AH4AK4_3939 PF00989 PAS fold AH4AK4_3940 PF03610 PTS system fructose IIA component AH4AK4_3940 PF05524 PEP-utilising enzyme, N-terminal AH4AK4_3940 PF00391 PEP-utilising enzyme, mobile domain AH4AK4_3940 PF00381 PTS HPr component phosphorylation site AH4AK4_3941 PF02734 DAK2 domain AH4AK4_3942 PF02733 Dak1 domain AH4AK4_3943 PF00860 Permease family AH4AK4_3944 PF03079 ARD/ARD' family AH4AK4_3951 PF03144 Elongation factor Tu domain 2 AH4AK4_3951 PF03143 Elongation factor Tu C-terminal domain AH4AK4_3951 PF00009 Elongation factor Tu GTP binding domain AH4AK4_3952 PF00009 Elongation factor Tu GTP binding domain AH4AK4_3952 PF03764 Elongation factor G, domain IV AH4AK4_3952 PF14492 Elongation Factor G, domain II AH4AK4_3952 PF00679 Elongation factor G C-terminus AH4AK4_3952 PF03144 Elongation factor Tu domain 2 AH4AK4_3953 PF00177 Ribosomal protein S7p/S5e AH4AK4_3954 PF00164 Ribosomal protein S12/S23 AH4AK4_3955 PF04077 DsrH like protein AH4AK4_3956 PF02635 DsrE/DsrF-like family AH4AK4_3957 PF02635 DsrE/DsrF-like family AH4AK4_3958 PF01042 Endoribonuclease L-PSP AH4AK4_3959 PF08348 YheO-like PAS domain AH4AK4_3959 PF13309 HTH domain AH4AK4_3960 PF04998 RNA polymerase Rpb1, domain 5 AH4AK4_3960 PF05000 RNA polymerase Rpb1, domain 4 AH4AK4_3960 PF04983 RNA polymerase Rpb1, domain 3 AH4AK4_3960 PF00623 RNA polymerase Rpb1, domain 2 AH4AK4_3960 PF04997 RNA polymerase Rpb1, domain 1 AH4AK4_3961 PF04565 RNA polymerase Rpb2, domain 3 AH4AK4_3961 PF04563 RNA polymerase beta subunit AH4AK4_3961 PF04561 RNA polymerase Rpb2, domain 2 AH4AK4_3961 PF04560 RNA polymerase Rpb2, domain 7 AH4AK4_3961 PF00562 RNA polymerase Rpb2, domain 6 AH4AK4_3961 PF10385 RNA polymerase beta subunit external 1 domain AH4AK4_3962 PF00542 Ribosomal protein L7/L12 C-terminal domain AH4AK4_3962 PF16320 Ribosomal protein L7/L12 dimerisation domain AH4AK4_3963 PF00466 Ribosomal protein L10 AH4AK4_3964 PF00687 Ribosomal protein L1p/L10e family AH4AK4_3965 PF00298 Ribosomal protein L11, RNA binding domain AH4AK4_3965 PF03946 Ribosomal protein L11, N-terminal domain AH4AK4_3966 PF02357 Transcription termination factor nusG AH4AK4_3966 PF00467 KOW motif AH4AK4_3967 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AH4AK4_3969 PF03144 Elongation factor Tu domain 2 AH4AK4_3969 PF03143 Elongation factor Tu C-terminal domain AH4AK4_3969 PF00009 Elongation factor Tu GTP binding domain AH4AK4_3973 PF00485 Phosphoribulokinase / Uridine kinase family AH4AK4_3974 PF02237 Biotin protein ligase C terminal domain AH4AK4_3974 PF03099 Biotin/lipoate A/B protein ligase family AH4AK4_3974 PF08279 HTH domain AH4AK4_3975 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AH4AK4_3975 PF01565 FAD binding domain AH4AK4_3976 PF02254 TrkA-N domain AH4AK4_3976 PF02080 TrkA-C domain AH4AK4_3977 PF02386 Cation transport protein AH4AK4_3978 PF01131 DNA topoisomerase AH4AK4_3978 PF01751 Toprim domain AH4AK4_3979 PF03264 NapC/NirT cytochrome c family, N-terminal region AH4AK4_3980 PF18364 Molybdopterin oxidoreductase N-terminal domain AH4AK4_3980 PF00384 Molybdopterin oxidoreductase AH4AK4_3980 PF01568 Molydopterin dinucleotide binding domain AH4AK4_3982 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_3982 PF08918 PhoQ Sensor AH4AK4_3983 PF00072 Response regulator receiver domain AH4AK4_3983 PF00486 Transcriptional regulatory protein, C terminal AH4AK4_3986 PF01794 Ferric reductase like transmembrane component AH4AK4_3987 PF00174 Oxidoreductase molybdopterin binding domain AH4AK4_3988 PF06496 Protein of unknown function (DUF1097) AH4AK4_3989 PF00072 Response regulator receiver domain AH4AK4_3989 PF00158 Sigma-54 interaction domain AH4AK4_3991 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_3991 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_3995 PF00571 CBS domain AH4AK4_3995 PF00478 IMP dehydrogenase / GMP reductase domain AH4AK4_3996 PF10063 Uncharacterized integral membrane protein (DUF2301) AH4AK4_3998 PF01037 Lrp/AsnC ligand binding domain AH4AK4_3999 PF03590 Aspartate-ammonia ligase AH4AK4_4001 PF07724 AAA domain (Cdc48 subfamily) AH4AK4_4001 PF00004 ATPase family associated with various cellular activities (AAA) AH4AK4_4001 PF02861 Clp amino terminal domain, pathogenicity island component AH4AK4_4001 PF17871 AAA lid domain AH4AK4_4001 PF10431 C-terminal, D2-small domain, of ClpB protein AH4AK4_4003 PF01479 S4 domain AH4AK4_4003 PF00849 RNA pseudouridylate synthase AH4AK4_4004 PF13525 Outer membrane lipoprotein AH4AK4_4005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AH4AK4_4005 PF07992 Pyridine nucleotide-disulphide oxidoreductase AH4AK4_4006 PF00375 Sodium:dicarboxylate symporter family AH4AK4_4007 PF03313 Serine dehydratase alpha chain AH4AK4_4008 PF02233 NAD(P) transhydrogenase beta subunit AH4AK4_4009 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AH4AK4_4009 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AH4AK4_4009 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AH4AK4_4010 PF00465 Iron-containing alcohol dehydrogenase AH4AK4_4011 PF06719 AraC-type transcriptional regulator N-terminus AH4AK4_4011 PF12833 Helix-turn-helix domain AH4AK4_4012 PF08212 Lipocalin-like domain AH4AK4_4014 PF00672 HAMP domain AH4AK4_4014 PF02743 Cache domain AH4AK4_4014 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_4015 PF02666 Phosphatidylserine decarboxylase AH4AK4_4019 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AH4AK4_4019 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AH4AK4_4020 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AH4AK4_4020 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AH4AK4_4021 PF01316 Arginine repressor, DNA binding domain AH4AK4_4021 PF02863 Arginine repressor, C-terminal domain AH4AK4_4022 PF03606 C4-dicarboxylate anaerobic carrier AH4AK4_4023 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AH4AK4_4023 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AH4AK4_4024 PF00696 Amino acid kinase family AH4AK4_4028 PF02743 Cache domain AH4AK4_4028 PF00672 HAMP domain AH4AK4_4028 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AH4AK4_4029 PF02653 Branched-chain amino acid transport system / permease component AH4AK4_4030 PF00005 ABC transporter AH4AK4_4031 PF13407 Periplasmic binding protein domain AH4AK4_4032 PF02929 Beta galactosidase small chain AH4AK4_4032 PF16353 Domain of unknown function(DUF4981) AH4AK4_4032 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AH4AK4_4032 PF00703 Glycosyl hydrolases family 2 AH4AK4_4032 PF02837 Glycosyl hydrolases family 2, sugar binding domain AH4AK4_4033 PF00356 Bacterial regulatory proteins, lacI family AH4AK4_4034 PF16363 GDP-mannose 4,6 dehydratase AH4AK4_4035 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AH4AK4_4035 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AH4AK4_4036 PF10509 Galactokinase galactose-binding signature AH4AK4_4036 PF08544 GHMP kinases C terminal AH4AK4_4036 PF00288 GHMP kinases N terminal domain AH4AK4_4037 PF01263 Aldose 1-epimerase AH4AK4_4040 PF04193 PQ loop repeat AH4AK4_4041 PF00356 Bacterial regulatory proteins, lacI family AH4AK4_4044 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_4045 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_4046 PF00005 ABC transporter AH4AK4_4046 PF17912 MalK OB fold domain AH4AK4_4048 PF02264 LamB porin AH4AK4_4049 PF00248 Aldo/keto reductase family AH4AK4_4050 PF02673 Bacitracin resistance protein BacA AH4AK4_4051 PF12973 ChrR Cupin-like domain AH4AK4_4052 PF04545 Sigma-70, region 4 AH4AK4_4052 PF04542 Sigma-70 region 2 AH4AK4_4054 PF05746 DALR anticodon binding domain AH4AK4_4054 PF03485 Arginyl tRNA synthetase N terminal domain AH4AK4_4054 PF00750 tRNA synthetases class I (R) AH4AK4_4056 PF00227 Proteasome subunit AH4AK4_4057 PF00004 ATPase family associated with various cellular activities (AAA) AH4AK4_4057 PF10431 C-terminal, D2-small domain, of ClpB protein AH4AK4_4057 PF07724 AAA domain (Cdc48 subfamily) AH4AK4_4058 PF07690 Major Facilitator Superfamily AH4AK4_4059 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_4059 PF03466 LysR substrate binding domain AH4AK4_4061 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AH4AK4_4062 PF00005 ABC transporter AH4AK4_4067 PF07992 Pyridine nucleotide-disulphide oxidoreductase AH4AK4_4067 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AH4AK4_4067 PF18267 Rubredoxin NAD+ reductase C-terminal domain AH4AK4_4067 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AH4AK4_4067 PF04324 BFD-like [2Fe-2S] binding domain AH4AK4_4068 PF13806 Rieske-like [2Fe-2S] domain AH4AK4_4069 PF13806 Rieske-like [2Fe-2S] domain AH4AK4_4070 PF01226 Formate/nitrite transporter AH4AK4_4071 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AH4AK4_4071 PF10414 Sirohaem synthase dimerisation region AH4AK4_4071 PF14824 Sirohaem biosynthesis protein central AH4AK4_4073 PF00571 CBS domain AH4AK4_4073 PF03448 MgtE intracellular N domain AH4AK4_4073 PF01769 Divalent cation transporter AH4AK4_4074 PF03737 Aldolase/RraA AH4AK4_4075 PF02592 Putative vitamin uptake transporter AH4AK4_4077 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AH4AK4_4078 PF00034 Cytochrome c AH4AK4_4079 PF09382 RQC domain AH4AK4_4079 PF16124 RecQ zinc-binding AH4AK4_4079 PF00570 HRDC domain AH4AK4_4079 PF00271 Helicase conserved C-terminal domain AH4AK4_4079 PF00270 DEAD/DEAH box helicase AH4AK4_4080 PF03061 Thioesterase superfamily AH4AK4_4083 PF03475 3-alpha domain AH4AK4_4083 PF03473 MOSC domain AH4AK4_4084 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_4085 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_4086 PF00005 ABC transporter AH4AK4_4086 PF08402 TOBE domain AH4AK4_4087 PF13416 Bacterial extracellular solute-binding protein AH4AK4_4089 PF13416 Bacterial extracellular solute-binding protein AH4AK4_4090 PF00202 Aminotransferase class-III AH4AK4_4092 PF00120 Glutamine synthetase, catalytic domain AH4AK4_4093 PF01258 Prokaryotic dksA/traR C4-type zinc finger AH4AK4_4096 PF05981 CreA protein AH4AK4_4097 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AH4AK4_4097 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AH4AK4_4098 PF00012 Hsp70 protein AH4AK4_4101 PF00128 Alpha amylase, catalytic domain AH4AK4_4101 PF02903 Alpha amylase, N-terminal ig-like domain AH4AK4_4104 PF05958 tRNA (Uracil-5-)-methyltransferase AH4AK4_4105 PF00072 Response regulator receiver domain AH4AK4_4105 PF00486 Transcriptional regulatory protein, C terminal AH4AK4_4106 PF00672 HAMP domain AH4AK4_4106 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_4106 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_4108 PF03949 Malic enzyme, NAD binding domain AH4AK4_4108 PF00390 Malic enzyme, N-terminal domain AH4AK4_4109 PF11066 Protein of unknown function (DUF2867) AH4AK4_4109 PF13460 NAD(P)H-binding AH4AK4_4110 PF01197 Ribosomal protein L31 AH4AK4_4111 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AH4AK4_4111 PF18074 Primosomal protein N C-terminal domain AH4AK4_4111 PF17764 3′ DNA-binding domain (3′BD) AH4AK4_4111 PF00271 Helicase conserved C-terminal domain AH4AK4_4111 PF00270 DEAD/DEAH box helicase AH4AK4_4112 PF00691 OmpA family AH4AK4_4112 PF01389 OmpA-like transmembrane domain AH4AK4_4113 PF00291 Pyridoxal-phosphate dependent enzyme AH4AK4_4113 PF00585 C-terminal regulatory domain of Threonine dehydratase AH4AK4_4114 PF00920 Dehydratase family AH4AK4_4115 PF01063 Amino-transferase class IV AH4AK4_4117 PF00205 Thiamine pyrophosphate enzyme, central domain AH4AK4_4117 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AH4AK4_4117 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AH4AK4_4118 PF13335 Magnesium chelatase, subunit ChlI C-terminal AH4AK4_4118 PF01078 Magnesium chelatase, subunit ChlI AH4AK4_4119 PF01553 Acyltransferase AH4AK4_4120 PF01553 Acyltransferase AH4AK4_4122 PF00857 Isochorismatase family AH4AK4_4123 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AH4AK4_4123 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AH4AK4_4124 PF01323 DSBA-like thioredoxin domain AH4AK4_4125 PF01636 Phosphotransferase enzyme family AH4AK4_4126 PF13746 4Fe-4S dicluster domain AH4AK4_4126 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AH4AK4_4126 PF12801 4Fe-4S binding domain AH4AK4_4127 PF06288 Protein of unknown function (DUF1040) AH4AK4_4128 PF01590 GAF domain AH4AK4_4128 PF00563 EAL domain AH4AK4_4128 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_4128 PF00360 Phytochrome region AH4AK4_4129 PF00376 MerR family regulatory protein AH4AK4_4129 PF09278 MerR, DNA binding AH4AK4_4130 PF00403 Heavy-metal-associated domain AH4AK4_4131 PF00156 Phosphoribosyl transferase domain AH4AK4_4132 PF01138 3' exoribonuclease family, domain 1 AH4AK4_4132 PF03725 3' exoribonuclease family, domain 2 AH4AK4_4133 PF08340 Domain of unknown function (DUF1732) AH4AK4_4133 PF03755 YicC-like family, N-terminal region AH4AK4_4135 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AH4AK4_4136 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AH4AK4_4137 PF00535 Glycosyl transferase family 2 AH4AK4_4138 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AH4AK4_4139 PF01467 Cytidylyltransferase-like AH4AK4_4140 PF04393 Protein of unknown function (DUF535) AH4AK4_4141 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AH4AK4_4141 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AH4AK4_4141 PF06827 Zinc finger found in FPG and IleRS AH4AK4_4143 PF00471 Ribosomal protein L33 AH4AK4_4144 PF04002 RadC-like JAB domain AH4AK4_4145 PF02441 Flavoprotein AH4AK4_4145 PF04127 DNA / pantothenate metabolism flavoprotein AH4AK4_4146 PF00692 dUTPase AH4AK4_4147 PF00440 Bacterial regulatory proteins, tetR family AH4AK4_4148 PF00924 Mechanosensitive ion channel AH4AK4_4148 PF05552 Conserved TM helix AH4AK4_4149 PF00342 Phosphoglucose isomerase AH4AK4_4150 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AH4AK4_4150 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AH4AK4_4151 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AH4AK4_4151 PF03466 LysR substrate binding domain AH4AK4_4153 PF00583 Acetyltransferase (GNAT) family AH4AK4_4153 PF13380 CoA binding domain AH4AK4_4153 PF13607 Succinyl-CoA ligase like flavodoxin domain AH4AK4_4159 PF12724 Flavodoxin domain AH4AK4_4160 PF02386 Cation transport protein AH4AK4_4161 PF01205 Uncharacterized protein family UPF0029 AH4AK4_4161 PF09186 Domain of unknown function (DUF1949) AH4AK4_4162 PF00557 Metallopeptidase family M24 AH4AK4_4163 PF13193 AMP-binding enzyme C-terminal domain AH4AK4_4163 PF00501 AMP-binding enzyme AH4AK4_4164 PF00378 Enoyl-CoA hydratase/isomerase AH4AK4_4164 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AH4AK4_4164 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AH4AK4_4165 PF00108 Thiolase, N-terminal domain AH4AK4_4165 PF02803 Thiolase, C-terminal domain AH4AK4_4166 PF00486 Transcriptional regulatory protein, C terminal AH4AK4_4166 PF00072 Response regulator receiver domain AH4AK4_4167 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_4167 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_4167 PF00672 HAMP domain AH4AK4_4169 PF01547 Bacterial extracellular solute-binding protein AH4AK4_4171 PF01206 Sulfurtransferase TusA AH4AK4_4172 PF01042 Endoribonuclease L-PSP AH4AK4_4173 PF13488 Glycine zipper AH4AK4_4173 PF00691 OmpA family AH4AK4_4178 PF03352 Methyladenine glycosylase AH4AK4_4179 PF02091 Glycyl-tRNA synthetase alpha subunit AH4AK4_4180 PF02092 Glycyl-tRNA synthetase beta subunit AH4AK4_4180 PF05746 DALR anticodon binding domain AH4AK4_4186 PF03222 Tryptophan/tyrosine permease family AH4AK4_4187 PF03222 Tryptophan/tyrosine permease family AH4AK4_4188 PF01212 Beta-eliminating lyase AH4AK4_4191 PF18113 Rubredoxin binding C-terminal domain AH4AK4_4191 PF07992 Pyridine nucleotide-disulphide oxidoreductase AH4AK4_4192 PF00753 Metallo-beta-lactamase superfamily AH4AK4_4192 PF00301 Rubredoxin AH4AK4_4192 PF00258 Flavodoxin AH4AK4_4193 PF00158 Sigma-54 interaction domain AH4AK4_4193 PF01590 GAF domain AH4AK4_4194 PF00356 Bacterial regulatory proteins, lacI family AH4AK4_4195 PF13458 Periplasmic binding protein AH4AK4_4196 PF02653 Branched-chain amino acid transport system / permease component AH4AK4_4197 PF11862 Domain of unknown function (DUF3382) AH4AK4_4197 PF02653 Branched-chain amino acid transport system / permease component AH4AK4_4198 PF12399 Branched-chain amino acid ATP-binding cassette transporter AH4AK4_4198 PF00005 ABC transporter AH4AK4_4199 PF00005 ABC transporter AH4AK4_4202 PF00581 Rhodanese-like domain AH4AK4_4203 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AH4AK4_4203 PF01694 Rhomboid family AH4AK4_4204 PF12262 Bacterial virulence factor lipase N-terminal AH4AK4_4205 PF04380 Membrane fusogenic activity AH4AK4_4206 PF00175 Oxidoreductase NAD-binding domain AH4AK4_4207 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AH4AK4_4209 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AH4AK4_4209 PF07497 Rho termination factor, RNA-binding domain AH4AK4_4209 PF07498 Rho termination factor, N-terminal domain AH4AK4_4210 PF00085 Thioredoxin AH4AK4_4211 PF00270 DEAD/DEAH box helicase AH4AK4_4211 PF00271 Helicase conserved C-terminal domain AH4AK4_4212 PF02541 Ppx/GppA phosphatase family AH4AK4_4215 PF04445 Putative SAM-dependent methyltransferase AH4AK4_4216 PF03707 Bacterial signalling protein N terminal repeat AH4AK4_4216 PF00563 EAL domain AH4AK4_4216 PF00990 Diguanylate cyclase, GGDEF domain AH4AK4_4218 PF01432 Peptidase family M3 AH4AK4_4219 PF00490 Delta-aminolevulinic acid dehydratase AH4AK4_4220 PF01026 TatD related DNase AH4AK4_4221 PF00902 Sec-independent protein translocase protein (TatC) AH4AK4_4222 PF02416 mttA/Hcf106 family AH4AK4_4223 PF02416 mttA/Hcf106 family AH4AK4_4224 PF03109 ABC1 family AH4AK4_4225 PF02036 SCP-2 sterol transfer family AH4AK4_4226 PF01209 ubiE/COQ5 methyltransferase family AH4AK4_4227 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AH4AK4_4228 PF07969 Amidohydrolase family AH4AK4_4236 PF03544 Gram-negative bacterial TonB protein C-terminal AH4AK4_4237 PF02472 Biopolymer transport protein ExbD/TolR AH4AK4_4238 PF01618 MotA/TolQ/ExbB proton channel family AH4AK4_4239 PF01618 MotA/TolQ/ExbB proton channel family AH4AK4_4241 PF03472 Autoinducer binding domain AH4AK4_4241 PF00196 Bacterial regulatory proteins, luxR family AH4AK4_4242 PF01380 SIS domain AH4AK4_4243 PF08220 DeoR-like helix-turn-helix domain AH4AK4_4243 PF00455 DeoR C terminal sensor domain AH4AK4_4244 PF00486 Transcriptional regulatory protein, C terminal AH4AK4_4244 PF00072 Response regulator receiver domain AH4AK4_4245 PF00672 HAMP domain AH4AK4_4245 PF00512 His Kinase A (phospho-acceptor) domain AH4AK4_4245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AH4AK4_4246 PF00905 Penicillin binding protein transpeptidase domain AH4AK4_4247 PF06123 Inner membrane protein CreD AH4AK4_4248 PF14602 Hexapeptide repeat of succinyl-transferase AH4AK4_4248 PF12804 MobA-like NTP transferase domain AH4AK4_4248 PF00132 Bacterial transferase hexapeptide (six repeats) AH4AK4_4249 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AH4AK4_4249 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AH4AK4_4250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AH4AK4_4250 PF02874 ATP synthase alpha/beta family, beta-barrel domain AH4AK4_4251 PF00231 ATP synthase AH4AK4_4252 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AH4AK4_4252 PF02874 ATP synthase alpha/beta family, beta-barrel domain AH4AK4_4252 PF00306 ATP synthase alpha/beta chain, C terminal domain AH4AK4_4253 PF00213 ATP synthase delta (OSCP) subunit AH4AK4_4254 PF00430 ATP synthase B/B' CF(0) AH4AK4_4255 PF00137 ATP synthase subunit C AH4AK4_4256 PF00119 ATP synthase A chain AH4AK4_4257 PF02195 ParB-like nuclease domain AH4AK4_4257 PF17762 HTH domain found in ParB protein AH4AK4_4258 PF13614 AAA domain AH4AK4_4259 PF02527 rRNA small subunit methyltransferase G AH4AK4_4260 PF01134 Glucose inhibited division protein A AH4AK4_4260 PF13932 GidA associated domain AH4AK4_4261 PF00258 Flavodoxin AH4AK4_4262 PF07715 TonB-dependent Receptor Plug Domain AH4AK4_4262 PF00593 TonB dependent receptor AH4AK4_4263 PF00005 ABC transporter AH4AK4_4264 PF00005 ABC transporter AH4AK4_4265 PF01497 Periplasmic binding protein AH4AK4_4266 PF01032 FecCD transport family AH4AK4_4267 PF10396 GTP-binding protein TrmE N-terminus AH4AK4_4267 PF12631 MnmE helical domain AH4AK4_4267 PF01926 50S ribosome-binding GTPase AH4AK4_4268 PF14849 YidC periplasmic domain AH4AK4_4268 PF02096 60Kd inner membrane protein AH4AK4_4269 PF00825 Ribonuclease P AH4AK4_4271 PF00528 Binding-protein-dependent transport system inner membrane component AH4AK4_4272 PF00497 Bacterial extracellular solute-binding proteins, family 3