AH4AK4_0023	PWY-4081	glutathione redox reactions I
AH4AK4_0039	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AH4AK4_0041	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AH4AK4_0041	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
AH4AK4_0050	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AH4AK4_0050	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AH4AK4_0050	PWY-5989	stearate biosynthesis II (bacteria and plants)
AH4AK4_0050	PWY-6113	superpathway of mycolate biosynthesis
AH4AK4_0050	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AH4AK4_0050	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AH4AK4_0050	PWY-7663	gondoate biosynthesis (anaerobic)
AH4AK4_0050	PWY-7664	oleate biosynthesis IV (anaerobic)
AH4AK4_0050	PWY-7858	AH4AK4_0050
AH4AK4_0050	PWYG-321	mycolate biosynthesis
AH4AK4_0068	PWY-6123	inosine-5'-phosphate biosynthesis I
AH4AK4_0068	PWY-7234	inosine-5'-phosphate biosynthesis III
AH4AK4_0070	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AH4AK4_0070	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AH4AK4_0079	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AH4AK4_0085	PWY-7378	aminopropanol phosphate biosynthesis II
AH4AK4_0104	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
AH4AK4_0104	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AH4AK4_0104	PWY-6148	tetrahydromethanopterin biosynthesis
AH4AK4_0104	PWY-7742	AH4AK4_0104
AH4AK4_0104	PWY-7745	AH4AK4_0104
AH4AK4_0104	PWY-7929	AH4AK4_0104
AH4AK4_0104	PWY-7934	AH4AK4_0104
AH4AK4_0104	PWY-7935	AH4AK4_0104
AH4AK4_0106	PWY-5667	CDP-diacylglycerol biosynthesis I
AH4AK4_0106	PWY-6453	stigma estolide biosynthesis
AH4AK4_0106	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AH4AK4_0106	PWY-7587	oleate biosynthesis III (cyanobacteria)
AH4AK4_0115	PWY-6936	seleno-amino acid biosynthesis
AH4AK4_0115	PWY-7274	D-cycloserine biosynthesis
AH4AK4_0115	PWY-7870	AH4AK4_0115
AH4AK4_0129	PWY-6807	xyloglucan degradation II (exoglucanase)
AH4AK4_0138	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AH4AK4_0139	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AH4AK4_0139	PWY-3162	L-tryptophan degradation V (side chain pathway)
AH4AK4_0139	PWY-5057	L-valine degradation II
AH4AK4_0139	PWY-5076	L-leucine degradation III
AH4AK4_0139	PWY-5078	L-isoleucine degradation II
AH4AK4_0139	PWY-5079	L-phenylalanine degradation III
AH4AK4_0139	PWY-5082	L-methionine degradation III
AH4AK4_0139	PWY-5480	pyruvate fermentation to ethanol I
AH4AK4_0139	PWY-5486	pyruvate fermentation to ethanol II
AH4AK4_0139	PWY-5751	phenylethanol biosynthesis
AH4AK4_0139	PWY-6313	serotonin degradation
AH4AK4_0139	PWY-6333	acetaldehyde biosynthesis I
AH4AK4_0139	PWY-6342	noradrenaline and adrenaline degradation
AH4AK4_0139	PWY-6587	pyruvate fermentation to ethanol III
AH4AK4_0139	PWY-6802	salidroside biosynthesis
AH4AK4_0139	PWY-6871	3-methylbutanol biosynthesis
AH4AK4_0139	PWY-7013	L-1,2-propanediol degradation
AH4AK4_0139	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AH4AK4_0139	PWY-7118	chitin degradation to ethanol
AH4AK4_0139	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AH4AK4_0139	PWY-7798	AH4AK4_0139
AH4AK4_0182	PWY-5642	2,4-dinitrotoluene degradation
AH4AK4_0200	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AH4AK4_0201	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AH4AK4_0206	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AH4AK4_0207	PWY-6609	adenine and adenosine salvage III
AH4AK4_0207	PWY-6611	adenine and adenosine salvage V
AH4AK4_0207	PWY-7179	purine deoxyribonucleosides degradation I
AH4AK4_0207	PWY-7179-1	purine deoxyribonucleosides degradation
AH4AK4_0211	PWY-381	nitrate reduction II (assimilatory)
AH4AK4_0211	PWY-5675	nitrate reduction V (assimilatory)
AH4AK4_0211	PWY-6549	L-glutamine biosynthesis III
AH4AK4_0211	PWY-6963	ammonia assimilation cycle I
AH4AK4_0211	PWY-6964	ammonia assimilation cycle II
AH4AK4_0221	PWY-5530	sorbitol biosynthesis II
AH4AK4_0221	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AH4AK4_0222	PWY-5101	L-isoleucine biosynthesis II
AH4AK4_0222	PWY-5103	L-isoleucine biosynthesis III
AH4AK4_0222	PWY-5104	L-isoleucine biosynthesis IV
AH4AK4_0222	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AH4AK4_0223	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AH4AK4_0223	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AH4AK4_0223	PWY-7242	D-fructuronate degradation
AH4AK4_0223	PWY-7310	D-glucosaminate degradation
AH4AK4_0223	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AH4AK4_0230	PWY-1042	glycolysis IV (plant cytosol)
AH4AK4_0230	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AH4AK4_0230	PWY-5484	glycolysis II (from fructose 6-phosphate)
AH4AK4_0230	PWY-5723	Rubisco shunt
AH4AK4_0230	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AH4AK4_0230	PWY-6886	1-butanol autotrophic biosynthesis
AH4AK4_0230	PWY-6901	superpathway of glucose and xylose degradation
AH4AK4_0230	PWY-7003	glycerol degradation to butanol
AH4AK4_0230	PWY-7124	ethylene biosynthesis V (engineered)
AH4AK4_0230	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AH4AK4_0233	PWY-5667	CDP-diacylglycerol biosynthesis I
AH4AK4_0233	PWY-5981	CDP-diacylglycerol biosynthesis III
AH4AK4_0233	PWY-7902	AH4AK4_0233
AH4AK4_0236	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AH4AK4_0298	PWY-5987	sorgoleone biosynthesis
AH4AK4_0298	PWY-5996	oleate biosynthesis II (animals and fungi)
AH4AK4_0307	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AH4AK4_0307	PWY-5743	3-hydroxypropanoate cycle
AH4AK4_0307	PWY-5744	glyoxylate assimilation
AH4AK4_0307	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AH4AK4_0307	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AH4AK4_0307	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AH4AK4_0307	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AH4AK4_0309	PWY-5028	L-histidine degradation II
AH4AK4_0309	PWY-5030	L-histidine degradation III
AH4AK4_0311	PWY-5028	L-histidine degradation II
AH4AK4_0311	PWY-5030	L-histidine degradation III
AH4AK4_0312	PWY-5028	L-histidine degradation II
AH4AK4_0312	PWY-5030	L-histidine degradation III
AH4AK4_0345	PWY-6482	diphthamide biosynthesis (archaea)
AH4AK4_0345	PWY-7546	diphthamide biosynthesis (eukaryotes)
AH4AK4_0351	PWY-2201	folate transformations I
AH4AK4_0351	PWY-3841	folate transformations II
AH4AK4_0351	PWY-7977	AH4AK4_0351
AH4AK4_0359	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AH4AK4_0360	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AH4AK4_0360	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AH4AK4_0360	PWY-6897	thiamin salvage II
AH4AK4_0360	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AH4AK4_0360	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AH4AK4_0360	PWY-6910	hydroxymethylpyrimidine salvage
AH4AK4_0360	PWY-7356	thiamin salvage IV (yeast)
AH4AK4_0360	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AH4AK4_0363	PWY-6891	thiazole biosynthesis II (Bacillus)
AH4AK4_0363	PWY-6892	thiazole biosynthesis I (E. coli)
AH4AK4_0364	PWY-6892	thiazole biosynthesis I (E. coli)
AH4AK4_0364	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AH4AK4_0381	PWY-5484	glycolysis II (from fructose 6-phosphate)
AH4AK4_0385	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AH4AK4_0385	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AH4AK4_0386	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AH4AK4_0386	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AH4AK4_0392	PWY-2941	L-lysine biosynthesis II
AH4AK4_0392	PWY-2942	L-lysine biosynthesis III
AH4AK4_0392	PWY-5097	L-lysine biosynthesis VI
AH4AK4_0393	PWY-2941	L-lysine biosynthesis II
AH4AK4_0393	PWY-5097	L-lysine biosynthesis VI
AH4AK4_0428	PWY-6854	ethylene biosynthesis III (microbes)
AH4AK4_0432	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AH4AK4_0433	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AH4AK4_0434	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AH4AK4_0435	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AH4AK4_0436	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AH4AK4_0436	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AH4AK4_0436	PWY-6406	salicylate biosynthesis I
AH4AK4_0437	PWY-5839	menaquinol-7 biosynthesis
AH4AK4_0437	PWY-5851	demethylmenaquinol-9 biosynthesis
AH4AK4_0437	PWY-5852	demethylmenaquinol-8 biosynthesis I
AH4AK4_0437	PWY-5853	demethylmenaquinol-6 biosynthesis I
AH4AK4_0437	PWY-5890	menaquinol-10 biosynthesis
AH4AK4_0437	PWY-5891	menaquinol-11 biosynthesis
AH4AK4_0437	PWY-5892	menaquinol-12 biosynthesis
AH4AK4_0437	PWY-5895	menaquinol-13 biosynthesis
AH4AK4_0456	PWY-6531	mannitol cycle
AH4AK4_0461	PWY-6157	autoinducer AI-1 biosynthesis
AH4AK4_0474	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AH4AK4_0496	PWY-5667	CDP-diacylglycerol biosynthesis I
AH4AK4_0496	PWY-5981	CDP-diacylglycerol biosynthesis III
AH4AK4_0496	PWY-6453	stigma estolide biosynthesis
AH4AK4_0496	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AH4AK4_0496	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AH4AK4_0496	PWY-7587	oleate biosynthesis III (cyanobacteria)
AH4AK4_0496	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
AH4AK4_0496	PWY-7782	AH4AK4_0496
AH4AK4_0523	PWY-2941	L-lysine biosynthesis II
AH4AK4_0523	PWY-2942	L-lysine biosynthesis III
AH4AK4_0523	PWY-5097	L-lysine biosynthesis VI
AH4AK4_0523	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AH4AK4_0523	PWY-6559	spermidine biosynthesis II
AH4AK4_0523	PWY-6562	norspermidine biosynthesis
AH4AK4_0523	PWY-7153	grixazone biosynthesis
AH4AK4_0523	PWY-7977	AH4AK4_0523
AH4AK4_0550	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AH4AK4_0551	PWY-7181	pyrimidine deoxyribonucleosides degradation
AH4AK4_0552	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AH4AK4_0553	PWY-4202	arsenate detoxification I (glutaredoxin)
AH4AK4_0553	PWY-5532	adenosine nucleotides degradation IV
AH4AK4_0553	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AH4AK4_0553	PWY-6608	guanosine nucleotides degradation III
AH4AK4_0553	PWY-6609	adenine and adenosine salvage III
AH4AK4_0553	PWY-6611	adenine and adenosine salvage V
AH4AK4_0553	PWY-6620	guanine and guanosine salvage
AH4AK4_0553	PWY-6627	salinosporamide A biosynthesis
AH4AK4_0553	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AH4AK4_0553	PWY-7179	purine deoxyribonucleosides degradation I
AH4AK4_0553	PWY-7179-1	purine deoxyribonucleosides degradation
AH4AK4_0576	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AH4AK4_0577	PWY-3341	L-proline biosynthesis III
AH4AK4_0577	PWY-4981	L-proline biosynthesis II (from arginine)
AH4AK4_0577	PWY-6344	L-ornithine degradation II (Stickland reaction)
AH4AK4_0604	PWY-1622	formaldehyde assimilation I (serine pathway)
AH4AK4_0604	PWY-5392	reductive TCA cycle II
AH4AK4_0604	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AH4AK4_0604	PWY-5690	TCA cycle II (plants and fungi)
AH4AK4_0604	PWY-5913	TCA cycle VI (obligate autotrophs)
AH4AK4_0604	PWY-6728	methylaspartate cycle
AH4AK4_0604	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AH4AK4_0604	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AH4AK4_0604	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AH4AK4_0613	PWY-6829	tRNA methylation (yeast)
AH4AK4_0613	PWY-7285	methylwyosine biosynthesis
AH4AK4_0613	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AH4AK4_0620	PWY-3841	folate transformations II
AH4AK4_0620	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AH4AK4_0620	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AH4AK4_0620	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AH4AK4_0620	PWY-7199	pyrimidine deoxyribonucleosides salvage
AH4AK4_0620	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AH4AK4_0627	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AH4AK4_0627	PWY-6167	flavin biosynthesis II (archaea)
AH4AK4_0627	PWY-6168	flavin biosynthesis III (fungi)
AH4AK4_0627	PWY-7863	AH4AK4_0627
AH4AK4_0629	PWY-7884	AH4AK4_0629
AH4AK4_0631	PWY-7560	methylerythritol phosphate pathway II
AH4AK4_0638	PWY-5381	pyridine nucleotide cycling (plants)
AH4AK4_0638	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AH4AK4_0638	PWY-7761	AH4AK4_0638
AH4AK4_0641	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AH4AK4_0641	PWY-6153	autoinducer AI-2 biosynthesis I
AH4AK4_0641	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AH4AK4_0661	PWY-6840	homoglutathione biosynthesis
AH4AK4_0661	PWY-7255	ergothioneine biosynthesis I (bacteria)
AH4AK4_0663	PWY-5392	reductive TCA cycle II
AH4AK4_0663	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AH4AK4_0663	PWY-5690	TCA cycle II (plants and fungi)
AH4AK4_0663	PWY-5913	TCA cycle VI (obligate autotrophs)
AH4AK4_0663	PWY-6728	methylaspartate cycle
AH4AK4_0663	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AH4AK4_0663	PWY-7254	TCA cycle VII (acetate-producers)
AH4AK4_0663	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AH4AK4_0696	PWY-5913	TCA cycle VI (obligate autotrophs)
AH4AK4_0696	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AH4AK4_0696	PWY-6638	sulfolactate degradation III
AH4AK4_0696	PWY-6642	(<i>R</i>)-cysteate degradation
AH4AK4_0696	PWY-6643	coenzyme M biosynthesis II
AH4AK4_0696	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AH4AK4_0696	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AH4AK4_0696	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AH4AK4_0700	PWY-1001	cellulose biosynthesis
AH4AK4_0702	PWY-6788	cellulose degradation II (fungi)
AH4AK4_0729	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
AH4AK4_0743	PWY-5316	nicotine biosynthesis
AH4AK4_0743	PWY-7342	superpathway of nicotine biosynthesis
AH4AK4_0745	PWY-1042	glycolysis IV (plant cytosol)
AH4AK4_0745	PWY-5484	glycolysis II (from fructose 6-phosphate)
AH4AK4_0745	PWY-6901	superpathway of glucose and xylose degradation
AH4AK4_0745	PWY-7003	glycerol degradation to butanol
AH4AK4_0746	PWY-5941	glycogen degradation II (eukaryotic)
AH4AK4_0746	PWY-6724	starch degradation II
AH4AK4_0746	PWY-6737	starch degradation V
AH4AK4_0746	PWY-7238	sucrose biosynthesis II
AH4AK4_0747	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AH4AK4_0747	PWY-622	starch biosynthesis
AH4AK4_0747	PWY-7900	AH4AK4_0747
AH4AK4_0770	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AH4AK4_0770	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AH4AK4_0789	PWY-43	putrescine biosynthesis II
AH4AK4_0790	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AH4AK4_0810	PWY-723	alkylnitronates degradation
AH4AK4_0828	PWY-3801	sucrose degradation II (sucrose synthase)
AH4AK4_0828	PWY-6527	stachyose degradation
AH4AK4_0828	PWY-7238	sucrose biosynthesis II
AH4AK4_0828	PWY-7343	UDP-glucose biosynthesis
AH4AK4_0828	PWY-7817	AH4AK4_0828
AH4AK4_0845	PWY-5482	pyruvate fermentation to acetate II
AH4AK4_0845	PWY-5485	pyruvate fermentation to acetate IV
AH4AK4_0845	PWY-5497	purine nucleobases degradation II (anaerobic)
AH4AK4_0871	PWY-5350	thiosulfate disproportionation III (rhodanese)
AH4AK4_0871	PWY-7927	AH4AK4_0871
AH4AK4_0895	PWY-5669	phosphatidylethanolamine biosynthesis I
AH4AK4_0907	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AH4AK4_0915	PWY-6855	chitin degradation I (archaea)
AH4AK4_0915	PWY-6902	chitin degradation II
AH4AK4_0915	PWY-7822	AH4AK4_0915
AH4AK4_0937	PWY-3341	L-proline biosynthesis III
AH4AK4_0937	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AH4AK4_0938	PWY-3341	L-proline biosynthesis III
AH4AK4_0938	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AH4AK4_0944	PWY-5194	siroheme biosynthesis
AH4AK4_0944	PWY-5196	factor 430 biosynthesis
AH4AK4_0944	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AH4AK4_0949	PWY-6683	sulfate reduction III (assimilatory)
AH4AK4_0953	PWY-6019	pseudouridine degradation
AH4AK4_0954	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AH4AK4_0954	PWY-5743	3-hydroxypropanoate cycle
AH4AK4_0954	PWY-5744	glyoxylate assimilation
AH4AK4_0954	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AH4AK4_0954	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AH4AK4_0954	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AH4AK4_0954	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AH4AK4_0963	PWY-3841	folate transformations II
AH4AK4_0963	PWY-6614	tetrahydrofolate biosynthesis
AH4AK4_0968	PWY-6683	sulfate reduction III (assimilatory)
AH4AK4_0969	PWY-6683	sulfate reduction III (assimilatory)
AH4AK4_0977	PWY-1042	glycolysis IV (plant cytosol)
AH4AK4_0977	PWY-5484	glycolysis II (from fructose 6-phosphate)
AH4AK4_0977	PWY-6901	superpathway of glucose and xylose degradation
AH4AK4_0977	PWY-7003	glycerol degradation to butanol
AH4AK4_0992	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AH4AK4_0992	PWY-6416	quinate degradation II
AH4AK4_0992	PWY-6707	gallate biosynthesis
AH4AK4_0993	PWY-5108	L-isoleucine biosynthesis V
AH4AK4_0993	PWY-5132	humulone biosynthesis
AH4AK4_0993	PWY-5133	cohumulone biosynthesis
AH4AK4_0993	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AH4AK4_0993	PWY-7118	chitin degradation to ethanol
AH4AK4_0993	PWY-7857	AH4AK4_0993
AH4AK4_1003	PWY-1622	formaldehyde assimilation I (serine pathway)
AH4AK4_1003	PWY-181	photorespiration
AH4AK4_1003	PWY-2161	folate polyglutamylation
AH4AK4_1003	PWY-2201	folate transformations I
AH4AK4_1003	PWY-3661	glycine betaine degradation I
AH4AK4_1003	PWY-3661-1	glycine betaine degradation II (mammalian)
AH4AK4_1003	PWY-3841	folate transformations II
AH4AK4_1003	PWY-5497	purine nucleobases degradation II (anaerobic)
AH4AK4_1005	PWY-7991	AH4AK4_1005
AH4AK4_1006	PWY-6167	flavin biosynthesis II (archaea)
AH4AK4_1006	PWY-6168	flavin biosynthesis III (fungi)
AH4AK4_1006	PWY-7980	AH4AK4_1006
AH4AK4_1007	PWY-6167	flavin biosynthesis II (archaea)
AH4AK4_1007	PWY-6168	flavin biosynthesis III (fungi)
AH4AK4_1007	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AH4AK4_1007	PWY-7991	AH4AK4_1007
AH4AK4_1008	PWY-6167	flavin biosynthesis II (archaea)
AH4AK4_1008	PWY-6168	flavin biosynthesis III (fungi)
AH4AK4_1010	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AH4AK4_1010	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AH4AK4_1010	PWY-6896	thiamin salvage I
AH4AK4_1010	PWY-6897	thiamin salvage II
AH4AK4_1011	PWY-5269	cardiolipin biosynthesis II
AH4AK4_1011	PWY-5668	cardiolipin biosynthesis I
AH4AK4_1011	PWY-7817	AH4AK4_1011
AH4AK4_1017	PWY-6891	thiazole biosynthesis II (Bacillus)
AH4AK4_1017	PWY-6892	thiazole biosynthesis I (E. coli)
AH4AK4_1017	PWY-7560	methylerythritol phosphate pathway II
AH4AK4_1041	PWY-6614	tetrahydrofolate biosynthesis
AH4AK4_1042	PWY-6749	CMP-legionaminate biosynthesis I
AH4AK4_1043	PWY-1042	glycolysis IV (plant cytosol)
AH4AK4_1043	PWY-5484	glycolysis II (from fructose 6-phosphate)
AH4AK4_1043	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AH4AK4_1043	PWY-7003	glycerol degradation to butanol
AH4AK4_1069	PWY-7805	AH4AK4_1069
AH4AK4_1069	PWY-7807	AH4AK4_1069
AH4AK4_1073	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AH4AK4_1073	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AH4AK4_1075	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AH4AK4_1075	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AH4AK4_1077	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AH4AK4_1077	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AH4AK4_1080	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AH4AK4_1080	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AH4AK4_1080	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AH4AK4_1080	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AH4AK4_1081	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AH4AK4_1081	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AH4AK4_1084	PWY-5381	pyridine nucleotide cycling (plants)
AH4AK4_1084	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AH4AK4_1084	PWY-7761	AH4AK4_1084
AH4AK4_1120	PWY-3781	aerobic respiration I (cytochrome c)
AH4AK4_1120	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AH4AK4_1120	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AH4AK4_1120	PWY-5690	TCA cycle II (plants and fungi)
AH4AK4_1120	PWY-6728	methylaspartate cycle
AH4AK4_1120	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AH4AK4_1120	PWY-7254	TCA cycle VII (acetate-producers)
AH4AK4_1120	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AH4AK4_1121	PWY-5392	reductive TCA cycle II
AH4AK4_1121	PWY-5913	TCA cycle VI (obligate autotrophs)
AH4AK4_1121	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AH4AK4_1140	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AH4AK4_1140	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AH4AK4_1140	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AH4AK4_1140	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AH4AK4_1146	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AH4AK4_1147	PWY-6164	3-dehydroquinate biosynthesis I
AH4AK4_1150	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AH4AK4_1150	PWY-5723	Rubisco shunt
AH4AK4_1151	PWY-181	photorespiration
AH4AK4_1154	PWY-5958	acridone alkaloid biosynthesis
AH4AK4_1154	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AH4AK4_1154	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AH4AK4_1178	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AH4AK4_1184	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AH4AK4_1189	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AH4AK4_1189	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AH4AK4_1195	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AH4AK4_1195	PWY-5723	Rubisco shunt
AH4AK4_1206	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AH4AK4_1206	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AH4AK4_1207	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AH4AK4_1207	PWY-5723	Rubisco shunt
AH4AK4_1207	PWY-6891	thiazole biosynthesis II (Bacillus)
AH4AK4_1207	PWY-6892	thiazole biosynthesis I (E. coli)
AH4AK4_1207	PWY-6901	superpathway of glucose and xylose degradation
AH4AK4_1207	PWY-7560	methylerythritol phosphate pathway II
AH4AK4_1212	PWY-7883	AH4AK4_1212
AH4AK4_1219	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AH4AK4_1232	PWY-6902	chitin degradation II
AH4AK4_1232	PWY-7822	AH4AK4_1232
AH4AK4_1232	PWY-7883	AH4AK4_1232
AH4AK4_1235	PWY-6788	cellulose degradation II (fungi)
AH4AK4_1250	PWY-7980	AH4AK4_1250
AH4AK4_1287	PWY-6854	ethylene biosynthesis III (microbes)
AH4AK4_1292	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AH4AK4_1292	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AH4AK4_1307	PWY-4202	arsenate detoxification I (glutaredoxin)
AH4AK4_1307	PWY-5532	adenosine nucleotides degradation IV
AH4AK4_1307	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AH4AK4_1307	PWY-6608	guanosine nucleotides degradation III
AH4AK4_1307	PWY-6609	adenine and adenosine salvage III
AH4AK4_1307	PWY-6611	adenine and adenosine salvage V
AH4AK4_1307	PWY-6620	guanine and guanosine salvage
AH4AK4_1307	PWY-6627	salinosporamide A biosynthesis
AH4AK4_1307	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AH4AK4_1307	PWY-7179	purine deoxyribonucleosides degradation I
AH4AK4_1307	PWY-7179-1	purine deoxyribonucleosides degradation
AH4AK4_1315	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
AH4AK4_1325	PWY-6482	diphthamide biosynthesis (archaea)
AH4AK4_1325	PWY-7546	diphthamide biosynthesis (eukaryotes)
AH4AK4_1336	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AH4AK4_1337	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AH4AK4_1337	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AH4AK4_1337	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AH4AK4_1338	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AH4AK4_1339	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AH4AK4_1341	PWY-5963	thio-molybdenum cofactor biosynthesis
AH4AK4_1350	PWY-6936	seleno-amino acid biosynthesis
AH4AK4_1358	PWY-6840	homoglutathione biosynthesis
AH4AK4_1358	PWY-7255	ergothioneine biosynthesis I (bacteria)
AH4AK4_1368	PWY-6906	chitin derivatives degradation
AH4AK4_1368	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AH4AK4_1368	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AH4AK4_1369	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AH4AK4_1369	PWY-6855	chitin degradation I (archaea)
AH4AK4_1369	PWY-6906	chitin derivatives degradation
AH4AK4_1371	PWY-6902	chitin degradation II
AH4AK4_1371	PWY-7822	AH4AK4_1371
AH4AK4_1371	PWY-7883	AH4AK4_1371
AH4AK4_1385	PWY-2723	trehalose degradation V
AH4AK4_1385	PWY-3801	sucrose degradation II (sucrose synthase)
AH4AK4_1385	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AH4AK4_1385	PWY-5661	GDP-glucose biosynthesis
AH4AK4_1385	PWY-5940	streptomycin biosynthesis
AH4AK4_1385	PWY-5941	glycogen degradation II (eukaryotic)
AH4AK4_1385	PWY-622	starch biosynthesis
AH4AK4_1385	PWY-6317	galactose degradation I (Leloir pathway)
AH4AK4_1385	PWY-6731	starch degradation III
AH4AK4_1385	PWY-6737	starch degradation V
AH4AK4_1385	PWY-6749	CMP-legionaminate biosynthesis I
AH4AK4_1385	PWY-6981	chitin biosynthesis
AH4AK4_1385	PWY-7238	sucrose biosynthesis II
AH4AK4_1385	PWY-7343	UDP-glucose biosynthesis
AH4AK4_1385	PWY-7900	AH4AK4_1385
AH4AK4_1385	PWY-7902	AH4AK4_1385
AH4AK4_1413	PWY-5386	methylglyoxal degradation I
AH4AK4_1419	PWY-7094	fatty acid salvage
AH4AK4_1419	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AH4AK4_1420	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
AH4AK4_1430	PWY-6823	molybdenum cofactor biosynthesis
AH4AK4_1433	PWY-5674	nitrate reduction IV (dissimilatory)
AH4AK4_1439	PWY-6823	molybdenum cofactor biosynthesis
AH4AK4_1441	PWY-6823	molybdenum cofactor biosynthesis
AH4AK4_1441	PWY-7887	AH4AK4_1441
AH4AK4_1448	PWY-6823	molybdenum cofactor biosynthesis
AH4AK4_1449	PWY-6823	molybdenum cofactor biosynthesis
AH4AK4_1450	PWY-5663	tetrahydrobiopterin biosynthesis I
AH4AK4_1450	PWY-5664	tetrahydrobiopterin biosynthesis II
AH4AK4_1450	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AH4AK4_1450	PWY-6703	preQ<sub>0</sub> biosynthesis
AH4AK4_1450	PWY-6983	tetrahydrobiopterin biosynthesis III
AH4AK4_1450	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AH4AK4_1450	PWY-7852	AH4AK4_1450
AH4AK4_1452	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AH4AK4_1452	PWY-2161	folate polyglutamylation
AH4AK4_1452	PWY-2201	folate transformations I
AH4AK4_1452	PWY-3841	folate transformations II
AH4AK4_1457	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AH4AK4_1463	PWY-40	putrescine biosynthesis I
AH4AK4_1463	PWY-43	putrescine biosynthesis II
AH4AK4_1463	PWY-6305	putrescine biosynthesis IV
AH4AK4_1463	PWY-6834	spermidine biosynthesis III
AH4AK4_1484	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
AH4AK4_1492	PWY-4261	glycerol degradation I
AH4AK4_1497	PWY-4261	glycerol degradation I
AH4AK4_1497	PWY-6118	glycerol-3-phosphate shuttle
AH4AK4_1497	PWY-6952	glycerophosphodiester degradation
AH4AK4_1499	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AH4AK4_1499	PWY-6164	3-dehydroquinate biosynthesis I
AH4AK4_1499	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AH4AK4_1500	PWY-3461	L-tyrosine biosynthesis II
AH4AK4_1500	PWY-3462	L-phenylalanine biosynthesis II
AH4AK4_1500	PWY-6120	L-tyrosine biosynthesis III
AH4AK4_1500	PWY-6627	salinosporamide A biosynthesis
AH4AK4_1500	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AH4AK4_1500	PWY-7626	bacilysin biosynthesis
AH4AK4_1525	PWY-4202	arsenate detoxification I (glutaredoxin)
AH4AK4_1525	PWY-4621	arsenate detoxification II (glutaredoxin)
AH4AK4_1528	PWY-6012	acyl carrier protein metabolism I
AH4AK4_1547	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AH4AK4_1547	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AH4AK4_1547	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AH4AK4_1547	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AH4AK4_1561	PWY-6143	CMP-pseudaminate biosynthesis
AH4AK4_1565	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AH4AK4_1568	PWY-6143	CMP-pseudaminate biosynthesis
AH4AK4_1568	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
AH4AK4_1568	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
AH4AK4_1568	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
AH4AK4_1568	PWY-7719	AH4AK4_1568
AH4AK4_1571	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AH4AK4_1571	PWY-6153	autoinducer AI-2 biosynthesis I
AH4AK4_1571	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AH4AK4_1575	PWY-5386	methylglyoxal degradation I
AH4AK4_1589	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AH4AK4_1589	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AH4AK4_1589	PWY-5989	stearate biosynthesis II (bacteria and plants)
AH4AK4_1589	PWY-6113	superpathway of mycolate biosynthesis
AH4AK4_1589	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AH4AK4_1589	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AH4AK4_1589	PWY-7663	gondoate biosynthesis (anaerobic)
AH4AK4_1589	PWY-7664	oleate biosynthesis IV (anaerobic)
AH4AK4_1589	PWY-7858	AH4AK4_1589
AH4AK4_1589	PWYG-321	mycolate biosynthesis
AH4AK4_1595	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AH4AK4_1595	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AH4AK4_1605	PWY-3162	L-tryptophan degradation V (side chain pathway)
AH4AK4_1605	PWY-5057	L-valine degradation II
AH4AK4_1605	PWY-5076	L-leucine degradation III
AH4AK4_1605	PWY-5078	L-isoleucine degradation II
AH4AK4_1605	PWY-5079	L-phenylalanine degradation III
AH4AK4_1605	PWY-5082	L-methionine degradation III
AH4AK4_1605	PWY-5480	pyruvate fermentation to ethanol I
AH4AK4_1605	PWY-5486	pyruvate fermentation to ethanol II
AH4AK4_1605	PWY-5751	phenylethanol biosynthesis
AH4AK4_1605	PWY-6313	serotonin degradation
AH4AK4_1605	PWY-6333	acetaldehyde biosynthesis I
AH4AK4_1605	PWY-6342	noradrenaline and adrenaline degradation
AH4AK4_1605	PWY-6587	pyruvate fermentation to ethanol III
AH4AK4_1605	PWY-6802	salidroside biosynthesis
AH4AK4_1605	PWY-6871	3-methylbutanol biosynthesis
AH4AK4_1605	PWY-7013	L-1,2-propanediol degradation
AH4AK4_1605	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AH4AK4_1605	PWY-7118	chitin degradation to ethanol
AH4AK4_1605	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AH4AK4_1614	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AH4AK4_1616	PWY-6825	phosphatidylcholine biosynthesis V
AH4AK4_1620	PWY-5686	UMP biosynthesis
AH4AK4_1620	PWY-7790	AH4AK4_1620
AH4AK4_1620	PWY-7791	AH4AK4_1620
AH4AK4_1644	PWY-2941	L-lysine biosynthesis II
AH4AK4_1644	PWY-2942	L-lysine biosynthesis III
AH4AK4_1644	PWY-5097	L-lysine biosynthesis VI
AH4AK4_1644	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AH4AK4_1644	PWY-6559	spermidine biosynthesis II
AH4AK4_1644	PWY-6562	norspermidine biosynthesis
AH4AK4_1644	PWY-7153	grixazone biosynthesis
AH4AK4_1644	PWY-7977	AH4AK4_1644
AH4AK4_1646	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AH4AK4_1659	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AH4AK4_1659	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AH4AK4_1732	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AH4AK4_1743	PWY-622	starch biosynthesis
AH4AK4_1743	PWY-7902	AH4AK4_1743
AH4AK4_1747	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AH4AK4_1747	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AH4AK4_1747	PWY-6406	salicylate biosynthesis I
AH4AK4_1751	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AH4AK4_1755	PWY-6012	acyl carrier protein metabolism I
AH4AK4_1755	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AH4AK4_1755	PWY-6289	petrobactin biosynthesis
AH4AK4_1769	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AH4AK4_1770	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AH4AK4_1770	PWY-6164	3-dehydroquinate biosynthesis I
AH4AK4_1770	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AH4AK4_1772	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AH4AK4_1772	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AH4AK4_1772	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AH4AK4_1775	PWY-6556	pyrimidine ribonucleosides salvage II
AH4AK4_1775	PWY-7181	pyrimidine deoxyribonucleosides degradation
AH4AK4_1775	PWY-7193	pyrimidine ribonucleosides salvage I
AH4AK4_1775	PWY-7199	pyrimidine deoxyribonucleosides salvage
AH4AK4_1778	PWY-6527	stachyose degradation
AH4AK4_1788	PWY-4261	glycerol degradation I
AH4AK4_1802	PWY-7892	AH4AK4_1802
AH4AK4_1809	PWY-3781	aerobic respiration I (cytochrome c)
AH4AK4_1809	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AH4AK4_1809	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AH4AK4_1809	PWY-5690	TCA cycle II (plants and fungi)
AH4AK4_1809	PWY-6728	methylaspartate cycle
AH4AK4_1809	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AH4AK4_1809	PWY-7254	TCA cycle VII (acetate-producers)
AH4AK4_1809	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AH4AK4_1810	PWY-3781	aerobic respiration I (cytochrome c)
AH4AK4_1810	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AH4AK4_1810	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AH4AK4_1810	PWY-5690	TCA cycle II (plants and fungi)
AH4AK4_1810	PWY-6728	methylaspartate cycle
AH4AK4_1810	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AH4AK4_1810	PWY-7254	TCA cycle VII (acetate-producers)
AH4AK4_1810	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AH4AK4_1811	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AH4AK4_1812	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AH4AK4_1813	PWY-5392	reductive TCA cycle II
AH4AK4_1813	PWY-5537	pyruvate fermentation to acetate V
AH4AK4_1813	PWY-5538	pyruvate fermentation to acetate VI
AH4AK4_1813	PWY-5690	TCA cycle II (plants and fungi)
AH4AK4_1813	PWY-5913	TCA cycle VI (obligate autotrophs)
AH4AK4_1813	PWY-6728	methylaspartate cycle
AH4AK4_1813	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AH4AK4_1813	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AH4AK4_1814	PWY-5392	reductive TCA cycle II
AH4AK4_1814	PWY-5537	pyruvate fermentation to acetate V
AH4AK4_1814	PWY-5538	pyruvate fermentation to acetate VI
AH4AK4_1814	PWY-5690	TCA cycle II (plants and fungi)
AH4AK4_1814	PWY-5913	TCA cycle VI (obligate autotrophs)
AH4AK4_1814	PWY-6728	methylaspartate cycle
AH4AK4_1814	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AH4AK4_1814	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AH4AK4_1823	PWY-6832	2-aminoethylphosphonate degradation II
AH4AK4_1826	PWY-5480	pyruvate fermentation to ethanol I
AH4AK4_1826	PWY-5485	pyruvate fermentation to acetate IV
AH4AK4_1826	PWY-5493	reductive monocarboxylic acid cycle
AH4AK4_1831	PWY-2941	L-lysine biosynthesis II
AH4AK4_1831	PWY-2942	L-lysine biosynthesis III
AH4AK4_1831	PWY-5097	L-lysine biosynthesis VI
AH4AK4_1831	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AH4AK4_1831	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AH4AK4_1831	PWY-6559	spermidine biosynthesis II
AH4AK4_1831	PWY-6562	norspermidine biosynthesis
AH4AK4_1831	PWY-7153	grixazone biosynthesis
AH4AK4_1831	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AH4AK4_1831	PWY-7977	AH4AK4_1831
AH4AK4_1836	PWY-7802	AH4AK4_1836
AH4AK4_1837	PWY-7801	AH4AK4_1837
AH4AK4_1848	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AH4AK4_1850	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AH4AK4_1850	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AH4AK4_1850	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AH4AK4_1850	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AH4AK4_1868	PWY-6134	L-tyrosine biosynthesis IV
AH4AK4_1868	PWY-7158	L-phenylalanine degradation V
AH4AK4_1869	PWY-7158	L-phenylalanine degradation V
AH4AK4_1883	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AH4AK4_1883	PWY-6596	adenosine nucleotides degradation I
AH4AK4_1883	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AH4AK4_1884	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AH4AK4_1896	PWY-5484	glycolysis II (from fructose 6-phosphate)
AH4AK4_1923	PWY-5074	mevalonate degradation
AH4AK4_1926	PWY-4381	fatty acid biosynthesis initiation I
AH4AK4_1926	PWY-5743	3-hydroxypropanoate cycle
AH4AK4_1926	PWY-5744	glyoxylate assimilation
AH4AK4_1926	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AH4AK4_1926	PWY-6722	candicidin biosynthesis
AH4AK4_1928	PWY-5642	2,4-dinitrotoluene degradation
AH4AK4_1978	PWY-6167	flavin biosynthesis II (archaea)
AH4AK4_1978	PWY-6168	flavin biosynthesis III (fungi)
AH4AK4_1978	PWY-7980	AH4AK4_1978
AH4AK4_1991	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AH4AK4_1991	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AH4AK4_1991	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AH4AK4_1991	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AH4AK4_2001	PWY-5532	adenosine nucleotides degradation IV
AH4AK4_2001	PWY-7181	pyrimidine deoxyribonucleosides degradation
AH4AK4_2018	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AH4AK4_2018	PWY-6435	4-hydroxybenzoate biosynthesis V
AH4AK4_2018	PWY-6863	pyruvate fermentation to hexanol
AH4AK4_2018	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AH4AK4_2018	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AH4AK4_2018	PWY-6948	sitosterol degradation to androstenedione
AH4AK4_2018	PWY-7094	fatty acid salvage
AH4AK4_2018	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
AH4AK4_2018	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AH4AK4_2018	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AH4AK4_2018	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
AH4AK4_2018	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AH4AK4_2018	PWY-735	jasmonic acid biosynthesis
AH4AK4_2018	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AH4AK4_2018	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AH4AK4_2018	PWY-7726	AH4AK4_2018
AH4AK4_2019	PWY-1361	benzoyl-CoA degradation I (aerobic)
AH4AK4_2019	PWY-5109	2-methylbutanoate biosynthesis
AH4AK4_2019	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AH4AK4_2019	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AH4AK4_2019	PWY-5177	glutaryl-CoA degradation
AH4AK4_2019	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AH4AK4_2019	PWY-6435	4-hydroxybenzoate biosynthesis V
AH4AK4_2019	PWY-6583	pyruvate fermentation to butanol I
AH4AK4_2019	PWY-6863	pyruvate fermentation to hexanol
AH4AK4_2019	PWY-6883	pyruvate fermentation to butanol II
AH4AK4_2019	PWY-6944	androstenedione degradation
AH4AK4_2019	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AH4AK4_2019	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AH4AK4_2019	PWY-7007	methyl ketone biosynthesis
AH4AK4_2019	PWY-7046	4-coumarate degradation (anaerobic)
AH4AK4_2019	PWY-7094	fatty acid salvage
AH4AK4_2019	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AH4AK4_2019	PWY-735	jasmonic acid biosynthesis
AH4AK4_2019	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AH4AK4_2019	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AH4AK4_2019	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AH4AK4_2019	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AH4AK4_2019	PWY-7726	AH4AK4_2019
AH4AK4_2019	PWY-7778	AH4AK4_2019
AH4AK4_2019	PWY-7779	AH4AK4_2019
AH4AK4_2062	PWY-6605	adenine and adenosine salvage II
AH4AK4_2062	PWY-6610	adenine and adenosine salvage IV
AH4AK4_2062	PWY-7805	AH4AK4_2062
AH4AK4_2062	PWY-7807	AH4AK4_2062
AH4AK4_2079	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AH4AK4_2088	PWY-7193	pyrimidine ribonucleosides salvage I
AH4AK4_2098	PWY-4381	fatty acid biosynthesis initiation I
AH4AK4_2099	PWY-4381	fatty acid biosynthesis initiation I
AH4AK4_2099	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AH4AK4_2099	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AH4AK4_2100	PWY-5367	petroselinate biosynthesis
AH4AK4_2100	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AH4AK4_2100	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AH4AK4_2100	PWY-5989	stearate biosynthesis II (bacteria and plants)
AH4AK4_2100	PWY-5994	palmitate biosynthesis I (animals and fungi)
AH4AK4_2100	PWY-6113	superpathway of mycolate biosynthesis
AH4AK4_2100	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AH4AK4_2100	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AH4AK4_2100	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AH4AK4_2100	PWY-7663	gondoate biosynthesis (anaerobic)
AH4AK4_2100	PWY-7664	oleate biosynthesis IV (anaerobic)
AH4AK4_2100	PWY-7858	AH4AK4_2100
AH4AK4_2100	PWYG-321	mycolate biosynthesis
AH4AK4_2103	PWY-6543	4-aminobenzoate biosynthesis
AH4AK4_2105	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AH4AK4_2105	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AH4AK4_2105	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AH4AK4_2105	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AH4AK4_2105	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AH4AK4_2105	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AH4AK4_2117	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AH4AK4_2117	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AH4AK4_2117	PWY-5989	stearate biosynthesis II (bacteria and plants)
AH4AK4_2117	PWY-5994	palmitate biosynthesis I (animals and fungi)
AH4AK4_2117	PWY-6113	superpathway of mycolate biosynthesis
AH4AK4_2117	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AH4AK4_2117	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AH4AK4_2117	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AH4AK4_2117	PWY-7663	gondoate biosynthesis (anaerobic)
AH4AK4_2117	PWY-7664	oleate biosynthesis IV (anaerobic)
AH4AK4_2117	PWY-7858	AH4AK4_2117
AH4AK4_2117	PWYG-321	mycolate biosynthesis
AH4AK4_2124	PWY-5686	UMP biosynthesis
AH4AK4_2125	PWY-5022	4-aminobutanoate degradation V
AH4AK4_2125	PWY-6728	methylaspartate cycle
AH4AK4_2125	PWY-7126	ethylene biosynthesis IV
AH4AK4_2133	PWY-3781	aerobic respiration I (cytochrome c)
AH4AK4_2133	PWY-4521	arsenite oxidation I (respiratory)
AH4AK4_2133	PWY-6692	Fe(II) oxidation
AH4AK4_2133	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AH4AK4_2171	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AH4AK4_2171	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AH4AK4_2171	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AH4AK4_2171	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AH4AK4_2171	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AH4AK4_2171	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AH4AK4_2171	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AH4AK4_2171	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AH4AK4_2171	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AH4AK4_2171	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AH4AK4_2172	PWY-181	photorespiration
AH4AK4_2173	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AH4AK4_2173	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AH4AK4_2173	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AH4AK4_2173	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AH4AK4_2173	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AH4AK4_2173	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AH4AK4_2173	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AH4AK4_2173	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AH4AK4_2174	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AH4AK4_2174	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AH4AK4_2174	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AH4AK4_2174	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AH4AK4_2174	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AH4AK4_2174	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AH4AK4_2174	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AH4AK4_2174	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AH4AK4_2192	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AH4AK4_2197	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AH4AK4_2199	PWY-6855	chitin degradation I (archaea)
AH4AK4_2199	PWY-6902	chitin degradation II
AH4AK4_2199	PWY-7822	AH4AK4_2199
AH4AK4_2218	PWY-1042	glycolysis IV (plant cytosol)
AH4AK4_2218	PWY-5484	glycolysis II (from fructose 6-phosphate)
AH4AK4_2218	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AH4AK4_2218	PWY-7003	glycerol degradation to butanol
AH4AK4_2219	PWY-1042	glycolysis IV (plant cytosol)
AH4AK4_2219	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AH4AK4_2219	PWY-5484	glycolysis II (from fructose 6-phosphate)
AH4AK4_2219	PWY-7385	1,3-propanediol biosynthesis (engineered)
AH4AK4_2236	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AH4AK4_2236	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AH4AK4_2236	PWY-7953	AH4AK4_2236
AH4AK4_2248	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AH4AK4_2248	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AH4AK4_2263	PWY-5941	glycogen degradation II (eukaryotic)
AH4AK4_2263	PWY-6731	starch degradation III
AH4AK4_2263	PWY-6737	starch degradation V
AH4AK4_2263	PWY-7238	sucrose biosynthesis II
AH4AK4_2269	PWY-5392	reductive TCA cycle II
AH4AK4_2269	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AH4AK4_2269	PWY-5690	TCA cycle II (plants and fungi)
AH4AK4_2269	PWY-5913	TCA cycle VI (obligate autotrophs)
AH4AK4_2269	PWY-6728	methylaspartate cycle
AH4AK4_2269	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AH4AK4_2269	PWY-7254	TCA cycle VII (acetate-producers)
AH4AK4_2269	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AH4AK4_2271	PWY-5958	acridone alkaloid biosynthesis
AH4AK4_2271	PWY-6543	4-aminobenzoate biosynthesis
AH4AK4_2271	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AH4AK4_2271	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AH4AK4_2283	PWY-7511	protein ubiquitylation
AH4AK4_2296	PWY-4261	glycerol degradation I
AH4AK4_2296	PWY-6118	glycerol-3-phosphate shuttle
AH4AK4_2296	PWY-6952	glycerophosphodiester degradation
AH4AK4_2297	PWY-4261	glycerol degradation I
AH4AK4_2297	PWY-6118	glycerol-3-phosphate shuttle
AH4AK4_2297	PWY-6952	glycerophosphodiester degradation
AH4AK4_2300	PWY-5674	nitrate reduction IV (dissimilatory)
AH4AK4_2315	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AH4AK4_2315	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AH4AK4_2315	PWY-6936	seleno-amino acid biosynthesis
AH4AK4_2315	PWY-702	L-methionine biosynthesis II
AH4AK4_2322	PWY-5676	acetyl-CoA fermentation to butanoate II
AH4AK4_2322	PWY-5741	ethylmalonyl-CoA pathway
AH4AK4_2322	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AH4AK4_2322	PWY-7948	AH4AK4_2322
AH4AK4_2327	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AH4AK4_2327	PWY-2201	folate transformations I
AH4AK4_2327	PWY-3841	folate transformations II
AH4AK4_2327	PWY-5030	L-histidine degradation III
AH4AK4_2327	PWY-5497	purine nucleobases degradation II (anaerobic)
AH4AK4_2327	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AH4AK4_2327	PWY-7909	AH4AK4_2327
AH4AK4_2331	PWY-5506	methanol oxidation to formaldehyde IV
AH4AK4_2335	PWY-7199	pyrimidine deoxyribonucleosides salvage
AH4AK4_2340	PWY-6703	preQ<sub>0</sub> biosynthesis
AH4AK4_2341	PWY-6703	preQ<sub>0</sub> biosynthesis
AH4AK4_2344	PWY-5686	UMP biosynthesis
AH4AK4_2344	PWY-7790	AH4AK4_2344
AH4AK4_2344	PWY-7791	AH4AK4_2344
AH4AK4_2349	PWY-7205	CMP phosphorylation
AH4AK4_2350	PWY-6168	flavin biosynthesis III (fungi)
AH4AK4_2350	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AH4AK4_2350	PWY-7991	AH4AK4_2350
AH4AK4_2390	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AH4AK4_2390	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AH4AK4_2390	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AH4AK4_2403	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AH4AK4_2403	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AH4AK4_2403	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AH4AK4_2403	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AH4AK4_2403	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AH4AK4_2403	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AH4AK4_2403	PWY-7205	CMP phosphorylation
AH4AK4_2403	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AH4AK4_2403	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AH4AK4_2403	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AH4AK4_2403	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AH4AK4_2403	PWY-7224	purine deoxyribonucleosides salvage
AH4AK4_2403	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AH4AK4_2403	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AH4AK4_2411	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AH4AK4_2423	PWY-6700	queuosine biosynthesis
AH4AK4_2424	PWY-6700	queuosine biosynthesis
AH4AK4_2434	PWY-6654	phosphopantothenate biosynthesis III
AH4AK4_2457	PWY-2301	<i>myo</i>-inositol biosynthesis
AH4AK4_2457	PWY-4702	phytate degradation I
AH4AK4_2457	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AH4AK4_2474	PWY-6610	adenine and adenosine salvage IV
AH4AK4_2476	PWY-5692	allantoin degradation to glyoxylate II
AH4AK4_2476	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
AH4AK4_2502	PWY-5747	2-methylcitrate cycle II
AH4AK4_2518	PWY-2161	folate polyglutamylation
AH4AK4_2519	PWY-4381	fatty acid biosynthesis initiation I
AH4AK4_2519	PWY-5743	3-hydroxypropanoate cycle
AH4AK4_2519	PWY-5744	glyoxylate assimilation
AH4AK4_2519	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AH4AK4_2519	PWY-6722	candicidin biosynthesis
AH4AK4_2523	PWY-2941	L-lysine biosynthesis II
AH4AK4_2523	PWY-2942	L-lysine biosynthesis III
AH4AK4_2523	PWY-5097	L-lysine biosynthesis VI
AH4AK4_2523	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AH4AK4_2523	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AH4AK4_2523	PWY-6559	spermidine biosynthesis II
AH4AK4_2523	PWY-6562	norspermidine biosynthesis
AH4AK4_2523	PWY-7153	grixazone biosynthesis
AH4AK4_2523	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AH4AK4_2523	PWY-7977	AH4AK4_2523
AH4AK4_2533	PWY-5484	glycolysis II (from fructose 6-phosphate)
AH4AK4_2533	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AH4AK4_2562	PWY-6871	3-methylbutanol biosynthesis
AH4AK4_2564	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AH4AK4_2564	PWY-5686	UMP biosynthesis
AH4AK4_2564	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AH4AK4_2564	PWY-7790	AH4AK4_2564
AH4AK4_2564	PWY-7791	AH4AK4_2564
AH4AK4_2565	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AH4AK4_2565	PWY-5686	UMP biosynthesis
AH4AK4_2565	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AH4AK4_2565	PWY-7790	AH4AK4_2565
AH4AK4_2565	PWY-7791	AH4AK4_2565
AH4AK4_2566	PWY-2941	L-lysine biosynthesis II
AH4AK4_2566	PWY-2942	L-lysine biosynthesis III
AH4AK4_2566	PWY-5097	L-lysine biosynthesis VI
AH4AK4_2569	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AH4AK4_2569	PWY-5723	Rubisco shunt
AH4AK4_2572	PWY-7039	phosphatidate metabolism, as a signaling molecule
AH4AK4_2572	PWY-7817	AH4AK4_2572
AH4AK4_2573	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AH4AK4_2573	PWY-6164	3-dehydroquinate biosynthesis I
AH4AK4_2573	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AH4AK4_2579	PWY-622	starch biosynthesis
AH4AK4_2579	PWY-7902	AH4AK4_2579
AH4AK4_2660	PWY-5269	cardiolipin biosynthesis II
AH4AK4_2660	PWY-5668	cardiolipin biosynthesis I
AH4AK4_2660	PWY-7817	AH4AK4_2660
AH4AK4_2664	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AH4AK4_2672	PWY-5913	TCA cycle VI (obligate autotrophs)
AH4AK4_2672	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AH4AK4_2672	PWY-6638	sulfolactate degradation III
AH4AK4_2672	PWY-6642	(<i>R</i>)-cysteate degradation
AH4AK4_2672	PWY-6643	coenzyme M biosynthesis II
AH4AK4_2672	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AH4AK4_2672	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AH4AK4_2672	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AH4AK4_2680	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AH4AK4_2680	PWY-5491	diethylphosphate degradation
AH4AK4_2681	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AH4AK4_2681	PWY-5491	diethylphosphate degradation
AH4AK4_2707	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AH4AK4_2707	PWY-7118	chitin degradation to ethanol
AH4AK4_2707	PWY-7294	xylose degradation IV
AH4AK4_2707	PWY-7295	L-arabinose degradation IV
AH4AK4_2707	PWY-7854	AH4AK4_2707
AH4AK4_2708	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AH4AK4_2711	PWY-7183	pyrimidine nucleobases salvage I
AH4AK4_2712	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AH4AK4_2712	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AH4AK4_2712	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AH4AK4_2713	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AH4AK4_2713	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AH4AK4_2766	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AH4AK4_2766	PWY-7820	AH4AK4_2766
AH4AK4_2776	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AH4AK4_2779	PWY-3221	dTDP-L-rhamnose biosynthesis II
AH4AK4_2779	PWY-6808	dTDP-D-forosamine biosynthesis
AH4AK4_2779	PWY-6942	dTDP-D-desosamine biosynthesis
AH4AK4_2779	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AH4AK4_2779	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AH4AK4_2779	PWY-6974	dTDP-L-olivose biosynthesis
AH4AK4_2779	PWY-6976	dTDP-L-mycarose biosynthesis
AH4AK4_2779	PWY-7104	dTDP-L-megosamine biosynthesis
AH4AK4_2779	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AH4AK4_2779	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AH4AK4_2779	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AH4AK4_2779	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AH4AK4_2779	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AH4AK4_2779	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AH4AK4_2779	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AH4AK4_2779	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AH4AK4_2779	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AH4AK4_2779	PWY-7688	AH4AK4_2779
AH4AK4_2779	PWY-7814	AH4AK4_2779
AH4AK4_2783	PWY-2722	trehalose degradation IV
AH4AK4_2783	PWY-2723	trehalose degradation V
AH4AK4_2783	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AH4AK4_2783	PWY-5661	GDP-glucose biosynthesis
AH4AK4_2783	PWY-621	sucrose degradation III (sucrose invertase)
AH4AK4_2783	PWY-7238	sucrose biosynthesis II
AH4AK4_2783	PWY-7385	1,3-propanediol biosynthesis (engineered)
AH4AK4_2785	PWY-1042	glycolysis IV (plant cytosol)
AH4AK4_2785	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AH4AK4_2785	PWY-5484	glycolysis II (from fructose 6-phosphate)
AH4AK4_2785	PWY-5723	Rubisco shunt
AH4AK4_2785	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AH4AK4_2785	PWY-6886	1-butanol autotrophic biosynthesis
AH4AK4_2785	PWY-6901	superpathway of glucose and xylose degradation
AH4AK4_2785	PWY-7003	glycerol degradation to butanol
AH4AK4_2785	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AH4AK4_2785	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AH4AK4_2788	PWY-7094	fatty acid salvage
AH4AK4_2788	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AH4AK4_2831	PWY-5958	acridone alkaloid biosynthesis
AH4AK4_2831	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AH4AK4_2831	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AH4AK4_2832	PWY-5958	acridone alkaloid biosynthesis
AH4AK4_2832	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AH4AK4_2832	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AH4AK4_2856	PWY-3781	aerobic respiration I (cytochrome c)
AH4AK4_2856	PWY-4521	arsenite oxidation I (respiratory)
AH4AK4_2856	PWY-6692	Fe(II) oxidation
AH4AK4_2856	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AH4AK4_2856	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
AH4AK4_2875	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AH4AK4_2875	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AH4AK4_2894	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AH4AK4_2894	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AH4AK4_2894	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AH4AK4_2897	PWY-7805	AH4AK4_2897
AH4AK4_2897	PWY-7807	AH4AK4_2897
AH4AK4_2904	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AH4AK4_2904	PWY-6164	3-dehydroquinate biosynthesis I
AH4AK4_2904	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AH4AK4_2911	PWY-5913	TCA cycle VI (obligate autotrophs)
AH4AK4_2911	PWY-6549	L-glutamine biosynthesis III
AH4AK4_2911	PWY-6728	methylaspartate cycle
AH4AK4_2911	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AH4AK4_2911	PWY-7124	ethylene biosynthesis V (engineered)
AH4AK4_2911	PWY-7254	TCA cycle VII (acetate-producers)
AH4AK4_2911	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AH4AK4_2913	PWY-3861	mannitol degradation II
AH4AK4_2913	PWY-3881	mannitol biosynthesis
AH4AK4_2913	PWY-5659	GDP-mannose biosynthesis
AH4AK4_2913	PWY-6992	1,5-anhydrofructose degradation
AH4AK4_2913	PWY-7456	mannan degradation
AH4AK4_2913	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
AH4AK4_2913	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AH4AK4_2928	PWY-7887	AH4AK4_2928
AH4AK4_2928	PWY-7892	AH4AK4_2928
AH4AK4_2930	PWY-6123	inosine-5'-phosphate biosynthesis I
AH4AK4_2930	PWY-6124	inosine-5'-phosphate biosynthesis II
AH4AK4_2930	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AH4AK4_2930	PWY-7234	inosine-5'-phosphate biosynthesis III
AH4AK4_2932	PWY-1042	glycolysis IV (plant cytosol)
AH4AK4_2932	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AH4AK4_2932	PWY-5484	glycolysis II (from fructose 6-phosphate)
AH4AK4_2932	PWY-5723	Rubisco shunt
AH4AK4_2932	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AH4AK4_2932	PWY-6886	1-butanol autotrophic biosynthesis
AH4AK4_2932	PWY-6901	superpathway of glucose and xylose degradation
AH4AK4_2932	PWY-7003	glycerol degradation to butanol
AH4AK4_2932	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AH4AK4_2932	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AH4AK4_2941	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AH4AK4_2941	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AH4AK4_2960	PWY-2582	brassinosteroid biosynthesis II
AH4AK4_2960	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AH4AK4_2960	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AH4AK4_2960	PWY-6948	sitosterol degradation to androstenedione
AH4AK4_2960	PWY-699	brassinosteroid biosynthesis I
AH4AK4_2960	PWY-7299	progesterone biosynthesis
AH4AK4_2962	PWY-702	L-methionine biosynthesis II
AH4AK4_2963	PWY-2941	L-lysine biosynthesis II
AH4AK4_2963	PWY-2942	L-lysine biosynthesis III
AH4AK4_2963	PWY-5097	L-lysine biosynthesis VI
AH4AK4_2963	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AH4AK4_2963	PWY-6559	spermidine biosynthesis II
AH4AK4_2963	PWY-6562	norspermidine biosynthesis
AH4AK4_2963	PWY-7153	grixazone biosynthesis
AH4AK4_2963	PWY-7977	AH4AK4_2963
AH4AK4_2979	PWY-4381	fatty acid biosynthesis initiation I
AH4AK4_2982	PWY-6936	seleno-amino acid biosynthesis
AH4AK4_2992	PWY-4041	&gamma;-glutamyl cycle
AH4AK4_2992	PWY-4061	glutathione-mediated detoxification I
AH4AK4_2992	PWY-5826	hypoglycin biosynthesis
AH4AK4_2992	PWY-6842	glutathione-mediated detoxification II
AH4AK4_2992	PWY-7112	4-hydroxy-2-nonenal detoxification
AH4AK4_2992	PWY-7559	glutathione degradation (DUG pathway - yeast)
AH4AK4_3030	PWY-6012	acyl carrier protein metabolism I
AH4AK4_3030	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AH4AK4_3030	PWY-6289	petrobactin biosynthesis
AH4AK4_3033	PWY-6167	flavin biosynthesis II (archaea)
AH4AK4_3033	PWY-6168	flavin biosynthesis III (fungi)
AH4AK4_3035	PWY-2201	folate transformations I
AH4AK4_3035	PWY-5497	purine nucleobases degradation II (anaerobic)
AH4AK4_3035	PWY-7909	AH4AK4_3035
AH4AK4_3063	PWY-6339	syringate degradation
AH4AK4_3071	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AH4AK4_3071	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AH4AK4_3113	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AH4AK4_3113	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AH4AK4_3113	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AH4AK4_3149	PWY-4381	fatty acid biosynthesis initiation I
AH4AK4_3149	PWY-5743	3-hydroxypropanoate cycle
AH4AK4_3149	PWY-5744	glyoxylate assimilation
AH4AK4_3149	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AH4AK4_3149	PWY-6722	candicidin biosynthesis
AH4AK4_3154	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AH4AK4_3154	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AH4AK4_3154	PWY-5989	stearate biosynthesis II (bacteria and plants)
AH4AK4_3154	PWY-5994	palmitate biosynthesis I (animals and fungi)
AH4AK4_3154	PWY-6113	superpathway of mycolate biosynthesis
AH4AK4_3154	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AH4AK4_3154	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AH4AK4_3154	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AH4AK4_3154	PWY-7663	gondoate biosynthesis (anaerobic)
AH4AK4_3154	PWY-7664	oleate biosynthesis IV (anaerobic)
AH4AK4_3154	PWY-7858	AH4AK4_3154
AH4AK4_3154	PWYG-321	mycolate biosynthesis
AH4AK4_3159	PWY-7560	methylerythritol phosphate pathway II
AH4AK4_3160	PWY-5667	CDP-diacylglycerol biosynthesis I
AH4AK4_3160	PWY-5981	CDP-diacylglycerol biosynthesis III
AH4AK4_3160	PWY-7817	AH4AK4_3160
AH4AK4_3167	PWY-7799	AH4AK4_3167
AH4AK4_3167	PWY-7800	AH4AK4_3167
AH4AK4_3184	PWY-6700	queuosine biosynthesis
AH4AK4_3188	PWY-6617	adenosine nucleotides degradation III
AH4AK4_3188	PWY-7569	arginomycin biosynthesis
AH4AK4_3188	PWY-7570	blasticidin S biosynthesis
AH4AK4_3215	PWY-6654	phosphopantothenate biosynthesis III
AH4AK4_3217	PWY-5101	L-isoleucine biosynthesis II
AH4AK4_3217	PWY-5103	L-isoleucine biosynthesis III
AH4AK4_3217	PWY-5104	L-isoleucine biosynthesis IV
AH4AK4_3217	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AH4AK4_3217	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AH4AK4_3217	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AH4AK4_3217	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AH4AK4_3218	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AH4AK4_3228	PWY-4202	arsenate detoxification I (glutaredoxin)
AH4AK4_3228	PWY-4621	arsenate detoxification II (glutaredoxin)
AH4AK4_3231	PWY-1042	glycolysis IV (plant cytosol)
AH4AK4_3231	PWY-5484	glycolysis II (from fructose 6-phosphate)
AH4AK4_3231	PWY-6901	superpathway of glucose and xylose degradation
AH4AK4_3231	PWY-7003	glycerol degradation to butanol
AH4AK4_3233	PWY-4621	arsenate detoxification II (glutaredoxin)
AH4AK4_3245	PWY-3821	galactose degradation III
AH4AK4_3245	PWY-6317	galactose degradation I (Leloir pathway)
AH4AK4_3245	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AH4AK4_3245	PWY-6527	stachyose degradation
AH4AK4_3245	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AH4AK4_3245	PWY-7344	UDP-D-galactose biosynthesis
AH4AK4_3266	PWY-3461	L-tyrosine biosynthesis II
AH4AK4_3266	PWY-3462	L-phenylalanine biosynthesis II
AH4AK4_3266	PWY-6120	L-tyrosine biosynthesis III
AH4AK4_3266	PWY-6627	salinosporamide A biosynthesis
AH4AK4_3266	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AH4AK4_3266	PWY-7626	bacilysin biosynthesis
AH4AK4_3306	PWY-4381	fatty acid biosynthesis initiation I
AH4AK4_3325	PWY-5392	reductive TCA cycle II
AH4AK4_3325	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AH4AK4_3325	PWY-5690	TCA cycle II (plants and fungi)
AH4AK4_3325	PWY-5913	TCA cycle VI (obligate autotrophs)
AH4AK4_3325	PWY-6728	methylaspartate cycle
AH4AK4_3325	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AH4AK4_3325	PWY-7254	TCA cycle VII (acetate-producers)
AH4AK4_3325	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AH4AK4_3327	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AH4AK4_3327	PWY-6853	ethylene biosynthesis II (microbes)
AH4AK4_3327	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AH4AK4_3328	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AH4AK4_3347	PWY-5723	Rubisco shunt
AH4AK4_3355	PWY-6855	chitin degradation I (archaea)
AH4AK4_3355	PWY-6902	chitin degradation II
AH4AK4_3355	PWY-7822	AH4AK4_3355
AH4AK4_3362	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AH4AK4_3362	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AH4AK4_3369	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AH4AK4_3369	PWY-7820	AH4AK4_3369
AH4AK4_3401	PWY-2781	<i>cis</i>-zeatin biosynthesis
AH4AK4_3405	PWY-6938	NADH repair
AH4AK4_3406	PWY-6700	queuosine biosynthesis
AH4AK4_3426	PWY-6123	inosine-5'-phosphate biosynthesis I
AH4AK4_3426	PWY-6124	inosine-5'-phosphate biosynthesis II
AH4AK4_3426	PWY-7234	inosine-5'-phosphate biosynthesis III
AH4AK4_3428	PWY-2941	L-lysine biosynthesis II
AH4AK4_3428	PWY-2942	L-lysine biosynthesis III
AH4AK4_3428	PWY-5097	L-lysine biosynthesis VI
AH4AK4_3433	PWY-5482	pyruvate fermentation to acetate II
AH4AK4_3433	PWY-5485	pyruvate fermentation to acetate IV
AH4AK4_3433	PWY-5497	purine nucleobases degradation II (anaerobic)
AH4AK4_3434	PWY-1281	sulfoacetaldehyde degradation I
AH4AK4_3434	PWY-5482	pyruvate fermentation to acetate II
AH4AK4_3434	PWY-5485	pyruvate fermentation to acetate IV
AH4AK4_3434	PWY-5497	purine nucleobases degradation II (anaerobic)
AH4AK4_3434	PWY-6637	sulfolactate degradation II
AH4AK4_3435	PWY-5101	L-isoleucine biosynthesis II
AH4AK4_3435	PWY-5103	L-isoleucine biosynthesis III
AH4AK4_3435	PWY-5104	L-isoleucine biosynthesis IV
AH4AK4_3435	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AH4AK4_3435	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AH4AK4_3435	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AH4AK4_3435	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AH4AK4_3436	PWY-5101	L-isoleucine biosynthesis II
AH4AK4_3436	PWY-5103	L-isoleucine biosynthesis III
AH4AK4_3436	PWY-5104	L-isoleucine biosynthesis IV
AH4AK4_3436	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AH4AK4_3436	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AH4AK4_3436	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AH4AK4_3436	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AH4AK4_3441	PWY-6871	3-methylbutanol biosynthesis
AH4AK4_3442	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AH4AK4_3452	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AH4AK4_3452	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AH4AK4_3452	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AH4AK4_3452	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AH4AK4_3452	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AH4AK4_3452	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AH4AK4_3452	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AH4AK4_3452	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AH4AK4_3462	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AH4AK4_3472	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AH4AK4_3472	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AH4AK4_3472	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AH4AK4_3472	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AH4AK4_3480	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AH4AK4_3480	PWY-6148	tetrahydromethanopterin biosynthesis
AH4AK4_3480	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AH4AK4_3480	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AH4AK4_3480	PWY-7852	AH4AK4_3480
AH4AK4_3480	PWY-7853	AH4AK4_3480
AH4AK4_3481	PWY-6654	phosphopantothenate biosynthesis III
AH4AK4_3486	PWY-6599	guanine and guanosine salvage II
AH4AK4_3486	PWY-6609	adenine and adenosine salvage III
AH4AK4_3486	PWY-6610	adenine and adenosine salvage IV
AH4AK4_3486	PWY-6620	guanine and guanosine salvage
AH4AK4_3489	PWY-7883	AH4AK4_3489
AH4AK4_3490	PWY-7805	AH4AK4_3490
AH4AK4_3490	PWY-7807	AH4AK4_3490
AH4AK4_3503	PWY-5340	sulfate activation for sulfonation
AH4AK4_3505	PWY-5278	sulfite oxidation III
AH4AK4_3505	PWY-5340	sulfate activation for sulfonation
AH4AK4_3505	PWY-6683	sulfate reduction III (assimilatory)
AH4AK4_3505	PWY-6932	selenate reduction
AH4AK4_3506	PWY-5278	sulfite oxidation III
AH4AK4_3506	PWY-5340	sulfate activation for sulfonation
AH4AK4_3506	PWY-6683	sulfate reduction III (assimilatory)
AH4AK4_3506	PWY-6932	selenate reduction
AH4AK4_3507	PWY-5194	siroheme biosynthesis
AH4AK4_3507	PWY-5196	factor 430 biosynthesis
AH4AK4_3507	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AH4AK4_3519	PWY-6123	inosine-5'-phosphate biosynthesis I
AH4AK4_3519	PWY-6124	inosine-5'-phosphate biosynthesis II
AH4AK4_3519	PWY-7234	inosine-5'-phosphate biosynthesis III
AH4AK4_3520	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AH4AK4_3520	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AH4AK4_3520	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AH4AK4_3523	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AH4AK4_3523	PWY-622	starch biosynthesis
AH4AK4_3523	PWY-7900	AH4AK4_3523
AH4AK4_3535	PWY-5381	pyridine nucleotide cycling (plants)
AH4AK4_3535	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AH4AK4_3535	PWY-6596	adenosine nucleotides degradation I
AH4AK4_3535	PWY-6606	guanosine nucleotides degradation II
AH4AK4_3535	PWY-6607	guanosine nucleotides degradation I
AH4AK4_3535	PWY-6608	guanosine nucleotides degradation III
AH4AK4_3535	PWY-7185	UTP and CTP dephosphorylation I
AH4AK4_3535	PWY-7821	AH4AK4_3535
AH4AK4_3537	PWY-7560	methylerythritol phosphate pathway II
AH4AK4_3538	PWY-7560	methylerythritol phosphate pathway II
AH4AK4_3540	PWY-1042	glycolysis IV (plant cytosol)
AH4AK4_3540	PWY-1622	formaldehyde assimilation I (serine pathway)
AH4AK4_3540	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AH4AK4_3540	PWY-5484	glycolysis II (from fructose 6-phosphate)
AH4AK4_3540	PWY-5723	Rubisco shunt
AH4AK4_3540	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AH4AK4_3540	PWY-6886	1-butanol autotrophic biosynthesis
AH4AK4_3540	PWY-6901	superpathway of glucose and xylose degradation
AH4AK4_3540	PWY-7003	glycerol degradation to butanol
AH4AK4_3540	PWY-7124	ethylene biosynthesis V (engineered)
AH4AK4_3540	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AH4AK4_3541	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AH4AK4_3541	PWY-7177	UTP and CTP dephosphorylation II
AH4AK4_3541	PWY-7185	UTP and CTP dephosphorylation I
AH4AK4_3558	PWY-5316	nicotine biosynthesis
AH4AK4_3558	PWY-7342	superpathway of nicotine biosynthesis
AH4AK4_3569	PWY-1042	glycolysis IV (plant cytosol)
AH4AK4_3569	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AH4AK4_3569	PWY-5484	glycolysis II (from fructose 6-phosphate)
AH4AK4_3569	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AH4AK4_3569	PWY-7385	1,3-propanediol biosynthesis (engineered)
AH4AK4_3570	PWY-1042	glycolysis IV (plant cytosol)
AH4AK4_3570	PWY-5484	glycolysis II (from fructose 6-phosphate)
AH4AK4_3570	PWY-6886	1-butanol autotrophic biosynthesis
AH4AK4_3570	PWY-6901	superpathway of glucose and xylose degradation
AH4AK4_3570	PWY-7003	glycerol degradation to butanol
AH4AK4_3573	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AH4AK4_3573	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AH4AK4_3573	PWY-7766	AH4AK4_3573
AH4AK4_3574	PWY-5381	pyridine nucleotide cycling (plants)
AH4AK4_3574	PWY-7761	AH4AK4_3574
AH4AK4_3602	PWY-4983	L-citrulline-nitric oxide cycle
AH4AK4_3602	PWY-4984	urea cycle
AH4AK4_3602	PWY-5	canavanine biosynthesis
AH4AK4_3602	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AH4AK4_3602	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AH4AK4_3603	PWY-4983	L-citrulline-nitric oxide cycle
AH4AK4_3603	PWY-4984	urea cycle
AH4AK4_3603	PWY-5	canavanine biosynthesis
AH4AK4_3603	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AH4AK4_3603	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AH4AK4_3604	PWY-4981	L-proline biosynthesis II (from arginine)
AH4AK4_3604	PWY-4984	urea cycle
AH4AK4_3604	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AH4AK4_3605	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AH4AK4_3605	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AH4AK4_3606	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AH4AK4_3606	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AH4AK4_3607	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AH4AK4_3608	PWY-1622	formaldehyde assimilation I (serine pathway)
AH4AK4_3608	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AH4AK4_3608	PWY-5913	TCA cycle VI (obligate autotrophs)
AH4AK4_3608	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AH4AK4_3608	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AH4AK4_3608	PWY-6549	L-glutamine biosynthesis III
AH4AK4_3608	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AH4AK4_3608	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AH4AK4_3608	PWY-7124	ethylene biosynthesis V (engineered)
AH4AK4_3613	PWY-5350	thiosulfate disproportionation III (rhodanese)
AH4AK4_3613	PWY-7927	AH4AK4_3613
AH4AK4_3620	PWY-2941	L-lysine biosynthesis II
AH4AK4_3620	PWY-2942	L-lysine biosynthesis III
AH4AK4_3620	PWY-5097	L-lysine biosynthesis VI
AH4AK4_3620	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AH4AK4_3620	PWY-6559	spermidine biosynthesis II
AH4AK4_3620	PWY-6562	norspermidine biosynthesis
AH4AK4_3620	PWY-7153	grixazone biosynthesis
AH4AK4_3620	PWY-7977	AH4AK4_3620
AH4AK4_3621	PWY-801	L-homocysteine and L-cysteine interconversion
AH4AK4_3647	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AH4AK4_3647	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AH4AK4_3672	PWY-2941	L-lysine biosynthesis II
AH4AK4_3672	PWY-2942	L-lysine biosynthesis III
AH4AK4_3672	PWY-5097	L-lysine biosynthesis VI
AH4AK4_3674	PWY-622	starch biosynthesis
AH4AK4_3674	PWY-7902	AH4AK4_3674
AH4AK4_3675	PWY-622	starch biosynthesis
AH4AK4_3697	PWY-3781	aerobic respiration I (cytochrome c)
AH4AK4_3697	PWY-4521	arsenite oxidation I (respiratory)
AH4AK4_3697	PWY-6692	Fe(II) oxidation
AH4AK4_3697	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AH4AK4_3734	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AH4AK4_3734	PWY-6148	tetrahydromethanopterin biosynthesis
AH4AK4_3734	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AH4AK4_3734	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AH4AK4_3735	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AH4AK4_3735	PWY-6148	tetrahydromethanopterin biosynthesis
AH4AK4_3735	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AH4AK4_3735	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AH4AK4_3735	PWY-7852	AH4AK4_3735
AH4AK4_3735	PWY-7853	AH4AK4_3735
AH4AK4_3746	PWY-5747	2-methylcitrate cycle II
AH4AK4_3752	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AH4AK4_3752	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AH4AK4_3754	PWY-6891	thiazole biosynthesis II (Bacillus)
AH4AK4_3754	PWY-6892	thiazole biosynthesis I (E. coli)
AH4AK4_3754	PWY-7560	methylerythritol phosphate pathway II
AH4AK4_3758	PWY-5316	nicotine biosynthesis
AH4AK4_3758	PWY-5381	pyridine nucleotide cycling (plants)
AH4AK4_3758	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AH4AK4_3758	PWY-7342	superpathway of nicotine biosynthesis
AH4AK4_3762	PWY-7851	AH4AK4_3762
AH4AK4_3765	PWY-6502	oxidized GTP and dGTP detoxification
AH4AK4_3772	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AH4AK4_3772	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AH4AK4_3772	PWY-7953	AH4AK4_3772
AH4AK4_3773	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AH4AK4_3773	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AH4AK4_3773	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AH4AK4_3773	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AH4AK4_3774	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AH4AK4_3774	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AH4AK4_3774	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AH4AK4_3774	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AH4AK4_3775	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AH4AK4_3775	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AH4AK4_3776	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AH4AK4_3776	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AH4AK4_3776	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AH4AK4_3777	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AH4AK4_3777	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AH4AK4_3777	PWY-7953	AH4AK4_3777
AH4AK4_3779	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AH4AK4_3779	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AH4AK4_3812	PWY-7980	AH4AK4_3812
AH4AK4_3834	PWY-3781	aerobic respiration I (cytochrome c)
AH4AK4_3834	PWY-6692	Fe(II) oxidation
AH4AK4_3834	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
AH4AK4_3834	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AH4AK4_3847	PWY-7310	D-glucosaminate degradation
AH4AK4_3848	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AH4AK4_3848	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AH4AK4_3848	PWY-7242	D-fructuronate degradation
AH4AK4_3848	PWY-7310	D-glucosaminate degradation
AH4AK4_3848	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AH4AK4_3858	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AH4AK4_3858	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AH4AK4_3866	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AH4AK4_3866	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AH4AK4_3866	PWY-7953	AH4AK4_3866
AH4AK4_3869	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AH4AK4_3869	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AH4AK4_3869	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AH4AK4_3869	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AH4AK4_3880	PWY-2201	folate transformations I
AH4AK4_3880	PWY-3841	folate transformations II
AH4AK4_3973	PWY-3961	phosphopantothenate biosynthesis II
AH4AK4_3974	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AH4AK4_3974	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AH4AK4_3975	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AH4AK4_3975	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AH4AK4_3975	PWY-7953	AH4AK4_3975
AH4AK4_3993	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AH4AK4_3993	PWY-6148	tetrahydromethanopterin biosynthesis
AH4AK4_3993	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AH4AK4_3993	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AH4AK4_3993	PWY-7852	AH4AK4_3993
AH4AK4_3993	PWY-7853	AH4AK4_3993
AH4AK4_4015	PWY-3181	L-tryptophan degradation VI (via tryptamine)
AH4AK4_4015	PWY-5290	secologanin and strictosidine biosynthesis
AH4AK4_4015	PWY-5473	hydroxycinnamic acid serotonin amides biosynthesis
AH4AK4_4015	PWY-5669	phosphatidylethanolamine biosynthesis I
AH4AK4_4015	PWY-581	indole-3-acetate biosynthesis II
AH4AK4_4015	PWY-5877	beta-carboline biosynthesis
AH4AK4_4015	PWY-6307	L-tryptophan degradation X (mammalian, via tryptamine)
AH4AK4_4015	PWY-6326	camptothecin biosynthesis
AH4AK4_4015	PWY-7936	AH4AK4_4015
AH4AK4_4019	PWY-5686	UMP biosynthesis
AH4AK4_4019	PWY-7790	AH4AK4_4019
AH4AK4_4019	PWY-7791	AH4AK4_4019
AH4AK4_4023	PWY-4981	L-proline biosynthesis II (from arginine)
AH4AK4_4023	PWY-4984	urea cycle
AH4AK4_4023	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AH4AK4_4025	PWY-4981	L-proline biosynthesis II (from arginine)
AH4AK4_4032	PWY-6807	xyloglucan degradation II (exoglucanase)
AH4AK4_4034	PWY-3821	galactose degradation III
AH4AK4_4034	PWY-6317	galactose degradation I (Leloir pathway)
AH4AK4_4034	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AH4AK4_4034	PWY-6527	stachyose degradation
AH4AK4_4034	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AH4AK4_4034	PWY-7344	UDP-D-galactose biosynthesis
AH4AK4_4035	PWY-6317	galactose degradation I (Leloir pathway)
AH4AK4_4035	PWY-6527	stachyose degradation
AH4AK4_4036	PWY-3821	galactose degradation III
AH4AK4_4036	PWY-6317	galactose degradation I (Leloir pathway)
AH4AK4_4036	PWY-6527	stachyose degradation
AH4AK4_4037	PWY-6317	galactose degradation I (Leloir pathway)
AH4AK4_4050	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AH4AK4_4067	PWY-6683	sulfate reduction III (assimilatory)
AH4AK4_4071	PWY-5194	siroheme biosynthesis
AH4AK4_4071	PWY-5196	factor 430 biosynthesis
AH4AK4_4071	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AH4AK4_4092	PWY-381	nitrate reduction II (assimilatory)
AH4AK4_4092	PWY-5675	nitrate reduction V (assimilatory)
AH4AK4_4092	PWY-6549	L-glutamine biosynthesis III
AH4AK4_4092	PWY-6963	ammonia assimilation cycle I
AH4AK4_4092	PWY-6964	ammonia assimilation cycle II
AH4AK4_4101	PWY-842	starch degradation I
AH4AK4_4114	PWY-5101	L-isoleucine biosynthesis II
AH4AK4_4114	PWY-5103	L-isoleucine biosynthesis III
AH4AK4_4114	PWY-5104	L-isoleucine biosynthesis IV
AH4AK4_4114	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AH4AK4_4115	PWY-5057	L-valine degradation II
AH4AK4_4115	PWY-5076	L-leucine degradation III
AH4AK4_4115	PWY-5078	L-isoleucine degradation II
AH4AK4_4115	PWY-5101	L-isoleucine biosynthesis II
AH4AK4_4115	PWY-5103	L-isoleucine biosynthesis III
AH4AK4_4115	PWY-5104	L-isoleucine biosynthesis IV
AH4AK4_4115	PWY-5108	L-isoleucine biosynthesis V
AH4AK4_4115	PWY-7767	AH4AK4_4115
AH4AK4_4117	PWY-5101	L-isoleucine biosynthesis II
AH4AK4_4117	PWY-5103	L-isoleucine biosynthesis III
AH4AK4_4117	PWY-5104	L-isoleucine biosynthesis IV
AH4AK4_4117	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AH4AK4_4117	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AH4AK4_4117	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AH4AK4_4117	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AH4AK4_4123	PWY-5381	pyridine nucleotide cycling (plants)
AH4AK4_4131	PWY-5686	UMP biosynthesis
AH4AK4_4131	PWY-7790	AH4AK4_4131
AH4AK4_4131	PWY-7791	AH4AK4_4131
AH4AK4_4135	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AH4AK4_4139	PWY-7851	AH4AK4_4139
AH4AK4_4145	PWY-7851	AH4AK4_4145
AH4AK4_4149	PWY-3801	sucrose degradation II (sucrose synthase)
AH4AK4_4149	PWY-5054	sorbitol biosynthesis I
AH4AK4_4149	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AH4AK4_4149	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AH4AK4_4149	PWY-5659	GDP-mannose biosynthesis
AH4AK4_4149	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AH4AK4_4149	PWY-621	sucrose degradation III (sucrose invertase)
AH4AK4_4149	PWY-622	starch biosynthesis
AH4AK4_4149	PWY-6981	chitin biosynthesis
AH4AK4_4149	PWY-6992	1,5-anhydrofructose degradation
AH4AK4_4149	PWY-7238	sucrose biosynthesis II
AH4AK4_4149	PWY-7347	sucrose biosynthesis III
AH4AK4_4149	PWY-7385	1,3-propanediol biosynthesis (engineered)
AH4AK4_4150	PWY-5103	L-isoleucine biosynthesis III
AH4AK4_4150	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AH4AK4_4153	PWY-5392	reductive TCA cycle II
AH4AK4_4153	PWY-5537	pyruvate fermentation to acetate V
AH4AK4_4153	PWY-5538	pyruvate fermentation to acetate VI
AH4AK4_4153	PWY-5690	TCA cycle II (plants and fungi)
AH4AK4_4153	PWY-5913	TCA cycle VI (obligate autotrophs)
AH4AK4_4153	PWY-6728	methylaspartate cycle
AH4AK4_4153	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AH4AK4_4153	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AH4AK4_4163	PWY-5108	L-isoleucine biosynthesis V
AH4AK4_4163	PWY-5132	humulone biosynthesis
AH4AK4_4163	PWY-5133	cohumulone biosynthesis
AH4AK4_4163	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AH4AK4_4163	PWY-7118	chitin degradation to ethanol
AH4AK4_4163	PWY-7857	AH4AK4_4163
AH4AK4_4164	PWY-1361	benzoyl-CoA degradation I (aerobic)
AH4AK4_4164	PWY-5109	2-methylbutanoate biosynthesis
AH4AK4_4164	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AH4AK4_4164	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
AH4AK4_4164	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AH4AK4_4164	PWY-5177	glutaryl-CoA degradation
AH4AK4_4164	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AH4AK4_4164	PWY-6435	4-hydroxybenzoate biosynthesis V
AH4AK4_4164	PWY-6583	pyruvate fermentation to butanol I
AH4AK4_4164	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
AH4AK4_4164	PWY-6863	pyruvate fermentation to hexanol
AH4AK4_4164	PWY-6883	pyruvate fermentation to butanol II
AH4AK4_4164	PWY-6944	androstenedione degradation
AH4AK4_4164	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AH4AK4_4164	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AH4AK4_4164	PWY-7007	methyl ketone biosynthesis
AH4AK4_4164	PWY-7046	4-coumarate degradation (anaerobic)
AH4AK4_4164	PWY-7094	fatty acid salvage
AH4AK4_4164	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AH4AK4_4164	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
AH4AK4_4164	PWY-7292	oleate &beta;-oxidation (thioesterase-dependent, yeast)
AH4AK4_4164	PWY-7307	oleate &beta;-oxidation (reductase-dependent, yeast)
AH4AK4_4164	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AH4AK4_4164	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AH4AK4_4164	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AH4AK4_4164	PWY-735	jasmonic acid biosynthesis
AH4AK4_4164	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AH4AK4_4164	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AH4AK4_4164	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AH4AK4_4164	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AH4AK4_4164	PWY-7726	AH4AK4_4164
AH4AK4_4164	PWY-7778	AH4AK4_4164
AH4AK4_4164	PWY-7779	AH4AK4_4164
AH4AK4_4165	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AH4AK4_4165	PWY-6435	4-hydroxybenzoate biosynthesis V
AH4AK4_4165	PWY-6863	pyruvate fermentation to hexanol
AH4AK4_4165	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AH4AK4_4165	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AH4AK4_4165	PWY-6948	sitosterol degradation to androstenedione
AH4AK4_4165	PWY-7094	fatty acid salvage
AH4AK4_4165	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
AH4AK4_4165	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AH4AK4_4165	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AH4AK4_4165	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
AH4AK4_4165	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AH4AK4_4165	PWY-735	jasmonic acid biosynthesis
AH4AK4_4165	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AH4AK4_4165	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AH4AK4_4165	PWY-7726	AH4AK4_4165
AH4AK4_4202	PWY-5350	thiosulfate disproportionation III (rhodanese)
AH4AK4_4202	PWY-7927	AH4AK4_4202
AH4AK4_4207	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AH4AK4_4207	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AH4AK4_4207	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AH4AK4_4207	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AH4AK4_4207	PWY-6978	plastoquinol-9 biosynthesis II
AH4AK4_4209	PWY-7980	AH4AK4_4209
AH4AK4_4219	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AH4AK4_4219	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AH4AK4_4226	PWY-5839	menaquinol-7 biosynthesis
AH4AK4_4226	PWY-5844	menaquinol-9 biosynthesis
AH4AK4_4226	PWY-5849	menaquinol-6 biosynthesis
AH4AK4_4226	PWY-5890	menaquinol-10 biosynthesis
AH4AK4_4226	PWY-5891	menaquinol-11 biosynthesis
AH4AK4_4226	PWY-5892	menaquinol-12 biosynthesis
AH4AK4_4226	PWY-5895	menaquinol-13 biosynthesis
AH4AK4_4242	PWY-6749	CMP-legionaminate biosynthesis I
AH4AK4_4248	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AH4AK4_4250	PWY-7980	AH4AK4_4250
AH4AK4_4252	PWY-7980	AH4AK4_4252