AH4AK4_0001 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain AH4AK4_0002 SM00480 DNA polymerase III beta subunit AH4AK4_0004 SM00387 Histidine kinase-like ATPases AH4AK4_0004 SM00433 TopoisomeraseII AH4AK4_0007 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_0015 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_0017 SM00448 cheY-homologous receiver domain AH4AK4_0017 SM00862 Transcriptional regulatory protein, C terminal AH4AK4_0018 SM00387 Histidine kinase-like ATPases AH4AK4_0018 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_0024 SM00091 PAS domain AH4AK4_0024 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_0024 SM00387 Histidine kinase-like ATPases AH4AK4_0032 SM00458 Ricin-type beta-trefoil AH4AK4_0037 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AH4AK4_0037 SM00954 Region found in RelA / SpoT proteins AH4AK4_0038 SM01409 AH4AK4_0038 AH4AK4_0039 SM00072 Guanylate kinase homologues. AH4AK4_0042 SM00267 diguanylate cyclase AH4AK4_0051 SM00028 Tetratricopeptide repeats AH4AK4_0051 SM00267 diguanylate cyclase AH4AK4_0061 SM00421 helix_turn_helix, Lux Regulon AH4AK4_0061 SM00448 cheY-homologous receiver domain AH4AK4_0062 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_0062 SM00387 Histidine kinase-like ATPases AH4AK4_0062 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_0062 SM00448 cheY-homologous receiver domain AH4AK4_0064 SM00387 Histidine kinase-like ATPases AH4AK4_0065 SM00448 cheY-homologous receiver domain AH4AK4_0065 SM00850 LytTr DNA-binding domain AH4AK4_0068 SM01001 AIR carboxylase AH4AK4_0071 SM00360 RNA recognition motif AH4AK4_0082 SM00052 Putative diguanylate phosphodiesterase AH4AK4_0082 SM00267 diguanylate cyclase AH4AK4_0085 SM00829 Enoylreductase AH4AK4_0098 SM00354 helix_turn _helix lactose operon repressor AH4AK4_0099 SM00829 Enoylreductase AH4AK4_0106 SM00563 Phosphate acyltransferases AH4AK4_0112 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_0112 SM00387 Histidine kinase-like ATPases AH4AK4_0112 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_0113 SM00448 cheY-homologous receiver domain AH4AK4_0113 SM00862 Transcriptional regulatory protein, C terminal AH4AK4_0115 SM00971 Serine acetyltransferase, N-terminal AH4AK4_0119 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AH4AK4_0119 SM00474 3'-5' exonuclease AH4AK4_0119 SM00475 5'-3' exonuclease AH4AK4_0119 SM00482 DNA polymerase A domain AH4AK4_0128 SM00354 helix_turn _helix lactose operon repressor AH4AK4_0129 SM01038 Beta galactosidase small chain AH4AK4_0139 SM00829 Enoylreductase AH4AK4_0144 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0151 SM01321 AH4AK4_0151 AH4AK4_0160 SM00749 bacterial OsmY and nodulation domain AH4AK4_0163 SM00825 Beta-ketoacyl synthase AH4AK4_0165 SM00326 Src homology 3 domains AH4AK4_0175 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_0180 SM00530 Helix-turn-helix XRE-family like proteins AH4AK4_0195 SM00257 Lysin motif AH4AK4_0206 SM00729 Elongator protein 3, MiaB family, Radical SAM AH4AK4_0208 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0208 SM00448 cheY-homologous receiver domain AH4AK4_0209 SM00387 Histidine kinase-like ATPases AH4AK4_0209 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_0211 SM01230 AH4AK4_0211 AH4AK4_0218 SM00487 DEAD-like helicases superfamily AH4AK4_0218 SM00490 helicase superfamily c-terminal domain AH4AK4_0219 SM00155 Phospholipase D. Active site motifs. AH4AK4_0224 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_0226 SM00354 helix_turn _helix lactose operon repressor AH4AK4_0231 SM00450 Rhodanese Homology Domain AH4AK4_0239 SM00316 Ribosomal protein S1-like RNA-binding domain AH4AK4_0239 SM00732 Likely ribonuclease with RNase H fold. AH4AK4_0242 SM00448 cheY-homologous receiver domain AH4AK4_0242 SM00862 Transcriptional regulatory protein, C terminal AH4AK4_0243 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_0243 SM00387 Histidine kinase-like ATPases AH4AK4_0243 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_0245 SM01403 AH4AK4_0245 AH4AK4_0249 SM01382 AH4AK4_0249 AH4AK4_0249 SM01383 AH4AK4_0249 AH4AK4_0251 SM00322 K homology RNA-binding domain AH4AK4_0255 SM01374 AH4AK4_0255 AH4AK4_0266 SM00363 S4 RNA-binding domain AH4AK4_0266 SM01390 AH4AK4_0266 AH4AK4_0267 SM00662 RNA polymerases D AH4AK4_0275 SM00822 AH4AK4_0275 AH4AK4_0295 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_0297 SM00155 Phospholipase D. Active site motifs. AH4AK4_0303 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0303 SM00962 SRP54-type protein, GTPase domain AH4AK4_0303 SM00963 SRP54-type protein, helical bundle domain AH4AK4_0304 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0307 SM00947 Carbonic anhydrase AH4AK4_0308 SM00345 helix_turn_helix gluconate operon transcriptional repressor AH4AK4_0308 SM00866 AH4AK4_0308 AH4AK4_0314 SM00052 Putative diguanylate phosphodiesterase AH4AK4_0315 SM00052 Putative diguanylate phosphodiesterase AH4AK4_0315 SM00267 diguanylate cyclase AH4AK4_0322 SM00965 Secretin and TonB N terminus short domain AH4AK4_0325 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0338 SM00316 Ribosomal protein S1-like RNA-binding domain AH4AK4_0351 SM01018 B12 binding domain AH4AK4_0354 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_0355 SM00448 cheY-homologous receiver domain AH4AK4_0355 SM00862 Transcriptional regulatory protein, C terminal AH4AK4_0358 SM00999 Aerolysin toxin AH4AK4_0364 SM00876 Biotin and Thiamin Synthesis associated domain AH4AK4_0365 SM00028 Tetratricopeptide repeats AH4AK4_0370 SM00267 diguanylate cyclase AH4AK4_0390 SM01219 AH4AK4_0390 AH4AK4_0402 SM00852 Probable molybdopterin binding domain AH4AK4_0406 SM00344 helix_turn_helix ASNC type AH4AK4_0409 SM00642 Alpha-amylase domain AH4AK4_0432 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AH4AK4_0445 SM00487 DEAD-like helicases superfamily AH4AK4_0445 SM00490 helicase superfamily c-terminal domain AH4AK4_0448 SM00635 Bacterial Ig-like domain 2 AH4AK4_0459 SM00357 Cold shock protein domain AH4AK4_0459 SM00955 AH4AK4_0459 AH4AK4_0462 SM00421 helix_turn_helix, Lux Regulon AH4AK4_0479 SM00387 Histidine kinase-like ATPases AH4AK4_0479 SM00433 TopoisomeraseII AH4AK4_0480 SM00434 DNA Topoisomerase IV AH4AK4_0489 SM00271 DnaJ molecular chaperone homology domain AH4AK4_0496 SM00563 Phosphate acyltransferases AH4AK4_0502 SM00986 Uracil DNA glycosylase superfamily AH4AK4_0502 SM00987 UreE urease accessory protein, C-terminal domain AH4AK4_0506 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0514 SM00347 helix_turn_helix multiple antibiotic resistance protein AH4AK4_0517 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AH4AK4_0517 SM00534 ATPase domain of DNA mismatch repair MUTS family AH4AK4_0520 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0522 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AH4AK4_0533 SM01091 Transporter associated domain AH4AK4_0550 SM01133 AH4AK4_0550 AH4AK4_0551 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AH4AK4_0560 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0563 SM00411 bacterial (prokaryotic) histone like domain AH4AK4_0572 SM00487 DEAD-like helicases superfamily AH4AK4_0572 SM00490 helicase superfamily c-terminal domain AH4AK4_0575 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0579 SM01152 AH4AK4_0579 AH4AK4_0593 SM00938 Nitrogen regulatory protein P-II AH4AK4_0596 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0599 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0600 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_0600 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AH4AK4_0605 SM00671 Sel1-like repeats. AH4AK4_0608 SM01091 Transporter associated domain AH4AK4_0610 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0610 SM00962 SRP54-type protein, GTPase domain AH4AK4_0610 SM00963 SRP54-type protein, helical bundle domain AH4AK4_0616 SM00927 DNA mismatch repair enzyme MutH AH4AK4_0618 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AH4AK4_0624 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AH4AK4_0627 SM00904 Riboflavin kinase AH4AK4_0639 SM00938 Nitrogen regulatory protein P-II AH4AK4_0642 SM00267 diguanylate cyclase AH4AK4_0643 SM00316 Ribosomal protein S1-like RNA-binding domain AH4AK4_0643 SM00357 Cold shock protein domain AH4AK4_0643 SM00955 AH4AK4_0643 AH4AK4_0644 SM00967 RNA 2'-O ribose methyltransferase substrate binding AH4AK4_0658 SM00829 Enoylreductase AH4AK4_0666 SM00883 Chaperonin 10 Kd subunit AH4AK4_0669 SM00052 Putative diguanylate phosphodiesterase AH4AK4_0669 SM00267 diguanylate cyclase AH4AK4_0672 SM00487 DEAD-like helicases superfamily AH4AK4_0672 SM00490 helicase superfamily c-terminal domain AH4AK4_0682 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0687 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_0687 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_0687 SM01049 AH4AK4_0687 AH4AK4_0703 SM00028 Tetratricopeptide repeats AH4AK4_0707 SM00642 Alpha-amylase domain AH4AK4_0710 SM00487 DEAD-like helicases superfamily AH4AK4_0710 SM00490 helicase superfamily c-terminal domain AH4AK4_0713 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_0722 SM00822 AH4AK4_0722 AH4AK4_0724 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_0724 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_0725 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AH4AK4_0726 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0742 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_0742 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_0745 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AH4AK4_0747 SM00642 Alpha-amylase domain AH4AK4_0748 SM00642 Alpha-amylase domain AH4AK4_0752 SM00829 Enoylreductase AH4AK4_0753 SM00347 helix_turn_helix multiple antibiotic resistance protein AH4AK4_0756 SM00344 helix_turn_helix ASNC type AH4AK4_0767 SM00345 helix_turn_helix gluconate operon transcriptional repressor AH4AK4_0776 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0777 SM00327 von Willebrand factor (vWF) type A domain AH4AK4_0778 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AH4AK4_0778 SM00091 PAS domain AH4AK4_0778 SM00267 diguanylate cyclase AH4AK4_0779 SM00028 Tetratricopeptide repeats AH4AK4_0779 SM00267 diguanylate cyclase AH4AK4_0783 SM00347 helix_turn_helix multiple antibiotic resistance protein AH4AK4_0797 SM00487 DEAD-like helicases superfamily AH4AK4_0797 SM00490 helicase superfamily c-terminal domain AH4AK4_0798 SM00267 diguanylate cyclase AH4AK4_0824 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0826 SM00448 cheY-homologous receiver domain AH4AK4_0829 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AH4AK4_0837 SM00327 von Willebrand factor (vWF) type A domain AH4AK4_0851 SM00422 helix_turn_helix, mercury resistance AH4AK4_0857 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0858 SM00116 Domain in cystathionine beta-synthase and other proteins. AH4AK4_0860 SM00260 Two component signalling adaptor domain AH4AK4_0860 SM00448 cheY-homologous receiver domain AH4AK4_0862 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0865 SM00052 Putative diguanylate phosphodiesterase AH4AK4_0871 SM00450 Rhodanese Homology Domain AH4AK4_0882 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_0883 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0890 SM00052 Putative diguanylate phosphodiesterase AH4AK4_0890 SM00091 PAS domain AH4AK4_0890 SM00267 diguanylate cyclase AH4AK4_0897 SM00479 AH4AK4_0897 AH4AK4_0903 SM00357 Cold shock protein domain AH4AK4_0905 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_0905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_0915 SM00495 Chitin-binding domain type 3 AH4AK4_0915 SM00636 AH4AK4_0915 AH4AK4_0916 SM00028 Tetratricopeptide repeats AH4AK4_0928 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0929 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0937 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AH4AK4_0943 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AH4AK4_0945 SM01012 AH4AK4_0945 AH4AK4_0948 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0954 SM01057 Eukaryotic-type carbonic anhydrase AH4AK4_0956 SM00477 DNA/RNA non-specific endonuclease AH4AK4_0956 SM00892 DNA/RNA non-specific endonuclease AH4AK4_0958 SM00852 Probable molybdopterin binding domain AH4AK4_0964 SM00382 ATPases associated with a variety of cellular activities AH4AK4_0972 SM00937 AH4AK4_0972 AH4AK4_0973 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_0973 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_0975 SM00870 AH4AK4_0975 AH4AK4_0977 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AH4AK4_0983 SM01266 AH4AK4_0983 AH4AK4_0985 SM00829 Enoylreductase AH4AK4_0990 SM00878 Biotin carboxylase C-terminal domain AH4AK4_0994 SM00052 Putative diguanylate phosphodiesterase AH4AK4_0994 SM00091 PAS domain AH4AK4_0994 SM00267 diguanylate cyclase AH4AK4_0999 SM00448 cheY-homologous receiver domain AH4AK4_0999 SM00862 Transcriptional regulatory protein, C terminal AH4AK4_1001 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_1001 SM00387 Histidine kinase-like ATPases AH4AK4_1001 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_1001 SM00448 cheY-homologous receiver domain AH4AK4_1013 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1017 SM00861 Transketolase, pyrimidine binding domain AH4AK4_1024 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1038 SM01103 AH4AK4_1038 AH4AK4_1040 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1048 SM00316 Ribosomal protein S1-like RNA-binding domain AH4AK4_1052 SM01387 AH4AK4_1052 AH4AK4_1053 SM00316 Ribosomal protein S1-like RNA-binding domain AH4AK4_1053 SM00322 K homology RNA-binding domain AH4AK4_1073 SM00729 Elongator protein 3, MiaB family, Radical SAM AH4AK4_1077 SM00936 Penicillin-binding protein 5, C-terminal domain AH4AK4_1090 SM00116 Domain in cystathionine beta-synthase and other proteins. AH4AK4_1090 SM01091 Transporter associated domain AH4AK4_1093 SM00729 Elongator protein 3, MiaB family, Radical SAM AH4AK4_1100 SM00267 diguanylate cyclase AH4AK4_1105 SM00841 Elongation factor P, C-terminal AH4AK4_1105 SM01185 AH4AK4_1105 AH4AK4_1107 SM01240 AH4AK4_1107 AH4AK4_1109 SM00387 Histidine kinase-like ATPases AH4AK4_1109 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_1110 SM00448 cheY-homologous receiver domain AH4AK4_1110 SM00862 Transcriptional regulatory protein, C terminal AH4AK4_1113 SM01236 AH4AK4_1113 AH4AK4_1123 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_1123 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_1137 SM00849 Metallo-beta-lactamase superfamily AH4AK4_1141 SM00842 Cell division protein FtsA AH4AK4_1145 SM00965 Secretin and TonB N terminus short domain AH4AK4_1158 SM01150 AH4AK4_1158 AH4AK4_1162 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1164 SM00642 Alpha-amylase domain AH4AK4_1167 SM01022 AH4AK4_1167 AH4AK4_1180 SM01400 AH4AK4_1180 AH4AK4_1185 SM00937 AH4AK4_1185 AH4AK4_1192 SM00986 Uracil DNA glycosylase superfamily AH4AK4_1192 SM00987 UreE urease accessory protein, C-terminal domain AH4AK4_1200 SM00732 Likely ribonuclease with RNase H fold. AH4AK4_1205 SM00731 SprT homologues. AH4AK4_1207 SM00861 Transketolase, pyrimidine binding domain AH4AK4_1215 SM00363 S4 RNA-binding domain AH4AK4_1217 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_1219 SM00788 Adenylosuccinate synthetase AH4AK4_1228 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AH4AK4_1228 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AH4AK4_1228 SM00493 AH4AK4_1228 AH4AK4_1231 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_1236 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1237 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1242 SM00729 Elongator protein 3, MiaB family, Radical SAM AH4AK4_1250 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1263 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1263 SM00962 SRP54-type protein, GTPase domain AH4AK4_1266 SM00448 cheY-homologous receiver domain AH4AK4_1268 SM00073 Histidine Phosphotransfer domain AH4AK4_1268 SM00260 Two component signalling adaptor domain AH4AK4_1268 SM00387 Histidine kinase-like ATPases AH4AK4_1268 SM01231 AH4AK4_1268 AH4AK4_1269 SM00448 cheY-homologous receiver domain AH4AK4_1273 SM00260 Two component signalling adaptor domain AH4AK4_1274 SM00260 Two component signalling adaptor domain AH4AK4_1276 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1313 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_1313 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_1316 SM01091 Transporter associated domain AH4AK4_1330 SM00829 Enoylreductase AH4AK4_1333 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_1336 SM00729 Elongator protein 3, MiaB family, Radical SAM AH4AK4_1336 SM00876 Biotin and Thiamin Synthesis associated domain AH4AK4_1343 SM00890 Domain of unknown function AH4AK4_1371 SM01081 Putative carbohydrate binding domain AH4AK4_1387 SM00347 helix_turn_helix multiple antibiotic resistance protein AH4AK4_1390 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1404 SM00052 Putative diguanylate phosphodiesterase AH4AK4_1404 SM00267 diguanylate cyclase AH4AK4_1406 SM00354 helix_turn _helix lactose operon repressor AH4AK4_1412 SM00257 Lysin motif AH4AK4_1413 SM00849 Metallo-beta-lactamase superfamily AH4AK4_1416 SM00479 AH4AK4_1416 AH4AK4_1418 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AH4AK4_1424 SM00897 FIST N domain AH4AK4_1424 SM01204 AH4AK4_1424 AH4AK4_1425 SM00387 Histidine kinase-like ATPases AH4AK4_1425 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_1425 SM00448 cheY-homologous receiver domain AH4AK4_1426 SM00464 Found in ATP-dependent protease La (LON) AH4AK4_1428 SM00421 helix_turn_helix, Lux Regulon AH4AK4_1428 SM00448 cheY-homologous receiver domain AH4AK4_1429 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_1429 SM00387 Histidine kinase-like ATPases AH4AK4_1430 SM00729 Elongator protein 3, MiaB family, Radical SAM AH4AK4_1433 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AH4AK4_1438 SM00852 Probable molybdopterin binding domain AH4AK4_1444 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1449 SM00852 Probable molybdopterin binding domain AH4AK4_1451 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_1451 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_1455 SM00867 YceI-like domain AH4AK4_1457 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AH4AK4_1459 SM00563 Phosphate acyltransferases AH4AK4_1465 SM00052 Putative diguanylate phosphodiesterase AH4AK4_1465 SM00267 diguanylate cyclase AH4AK4_1466 SM00507 HNH nucleases AH4AK4_1469 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AH4AK4_1470 SM00363 S4 RNA-binding domain AH4AK4_1474 SM00871 Bacterial transcription activator, effector binding domain AH4AK4_1481 SM00345 helix_turn_helix gluconate operon transcriptional repressor AH4AK4_1495 SM00420 helix_turn_helix, Deoxyribose operon repressor AH4AK4_1495 SM01134 AH4AK4_1495 AH4AK4_1500 SM00830 Chorismate mutase type II AH4AK4_1516 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1529 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_1529 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AH4AK4_1533 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1534 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_1534 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AH4AK4_1539 SM00052 Putative diguanylate phosphodiesterase AH4AK4_1539 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AH4AK4_1539 SM00091 PAS domain AH4AK4_1539 SM00267 diguanylate cyclase AH4AK4_1540 SM00450 Rhodanese Homology Domain AH4AK4_1546 SM01359 AH4AK4_1546 AH4AK4_1546 SM01360 AH4AK4_1546 AH4AK4_1549 SM00981 AH4AK4_1549 AH4AK4_1561 SM00858 AH4AK4_1561 AH4AK4_1574 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_1574 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_1576 SM00478 endonuclease III AH4AK4_1576 SM00525 AH4AK4_1576 AH4AK4_1578 SM00900 AH4AK4_1578 AH4AK4_1586 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AH4AK4_1586 SM00091 PAS domain AH4AK4_1586 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_1596 SM00487 DEAD-like helicases superfamily AH4AK4_1596 SM00490 helicase superfamily c-terminal domain AH4AK4_1602 SM00448 cheY-homologous receiver domain AH4AK4_1602 SM00850 LytTr DNA-binding domain AH4AK4_1603 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AH4AK4_1603 SM00387 Histidine kinase-like ATPases AH4AK4_1604 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AH4AK4_1610 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1611 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1614 SM01005 Alanine racemase, C-terminal domain AH4AK4_1622 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_1622 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_1656 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1670 SM00460 Transglutaminase/protease-like homologues AH4AK4_1684 SM00671 Sel1-like repeats. AH4AK4_1695 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1695 SM01086 C-terminal, D2-small domain, of ClpB protein AH4AK4_1696 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1715 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1716 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1730 SM00493 AH4AK4_1730 AH4AK4_1731 SM00387 Histidine kinase-like ATPases AH4AK4_1738 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_1738 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_1738 SM01049 AH4AK4_1738 AH4AK4_1742 SM00052 Putative diguanylate phosphodiesterase AH4AK4_1742 SM00267 diguanylate cyclase AH4AK4_1750 SM00823 Phosphopantetheine attachment site AH4AK4_1751 SM00822 AH4AK4_1751 AH4AK4_1752 SM00823 Phosphopantetheine attachment site AH4AK4_1756 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1765 SM00893 Electron transfer flavoprotein domain AH4AK4_1767 SM00893 Electron transfer flavoprotein domain AH4AK4_1782 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_1787 SM01007 Class II Aldolase and Adducin N-terminal domain AH4AK4_1790 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1792 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_1803 SM00825 Beta-ketoacyl synthase AH4AK4_1811 SM00861 Transketolase, pyrimidine binding domain AH4AK4_1814 SM00881 CoA binding domain AH4AK4_1815 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_1819 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1821 SM00345 helix_turn_helix gluconate operon transcriptional repressor AH4AK4_1821 SM00866 AH4AK4_1821 AH4AK4_1829 SM00873 B3/4 domain AH4AK4_1831 SM00859 Semialdehyde dehydrogenase, NAD binding domain AH4AK4_1832 SM00357 Cold shock protein domain AH4AK4_1834 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1834 SM01086 C-terminal, D2-small domain, of ClpB protein AH4AK4_1835 SM00316 Ribosomal protein S1-like RNA-binding domain AH4AK4_1839 SM00267 diguanylate cyclase AH4AK4_1839 SM00448 cheY-homologous receiver domain AH4AK4_1841 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AH4AK4_1841 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AH4AK4_1843 SM00344 helix_turn_helix ASNC type AH4AK4_1844 SM00843 AH4AK4_1844 AH4AK4_1846 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1853 SM00354 helix_turn _helix lactose operon repressor AH4AK4_1855 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1857 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1862 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1870 SM00091 PAS domain AH4AK4_1870 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1872 SM00267 diguanylate cyclase AH4AK4_1872 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_1874 SM00729 Elongator protein 3, MiaB family, Radical SAM AH4AK4_1880 SM00642 Alpha-amylase domain AH4AK4_1883 SM00116 Domain in cystathionine beta-synthase and other proteins. AH4AK4_1883 SM01240 AH4AK4_1883 AH4AK4_1887 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_1889 SM00364 Leucine-rich repeats, bacterial type AH4AK4_1889 SM00369 Leucine-rich repeats, typical (most populated) subfamily AH4AK4_1897 SM00487 DEAD-like helicases superfamily AH4AK4_1897 SM00490 helicase superfamily c-terminal domain AH4AK4_1897 SM00982 AH4AK4_1897 AH4AK4_1897 SM01058 CarD-like/TRCF domain AH4AK4_1900 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1902 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AH4AK4_1907 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1907 SM00994 ClpX C4-type zinc finger AH4AK4_1907 SM01086 C-terminal, D2-small domain, of ClpB protein AH4AK4_1908 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1908 SM00464 Found in ATP-dependent protease La (LON) AH4AK4_1909 SM00411 bacterial (prokaryotic) histone like domain AH4AK4_1911 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1914 SM00479 AH4AK4_1914 AH4AK4_1915 SM00100 Cyclic nucleotide-monophosphate binding domain AH4AK4_1915 SM00116 Domain in cystathionine beta-synthase and other proteins. AH4AK4_1922 SM00422 helix_turn_helix, mercury resistance AH4AK4_1924 SM00878 Biotin carboxylase C-terminal domain AH4AK4_1933 SM00822 AH4AK4_1933 AH4AK4_1941 SM00382 ATPases associated with a variety of cellular activities AH4AK4_1950 SM00267 diguanylate cyclase AH4AK4_1954 SM00822 AH4AK4_1954 AH4AK4_1956 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_1959 SM00518 AP endonuclease family 2 AH4AK4_1966 SM00090 RIO-like kinase AH4AK4_1970 SM00486 DNA polymerase type-B family AH4AK4_1986 SM00347 helix_turn_helix multiple antibiotic resistance protein AH4AK4_2003 SM00422 helix_turn_helix, mercury resistance AH4AK4_2005 SM00052 Putative diguanylate phosphodiesterase AH4AK4_2012 SM00028 Tetratricopeptide repeats AH4AK4_2013 SM00327 von Willebrand factor (vWF) type A domain AH4AK4_2021 SM01322 AH4AK4_2021 AH4AK4_2025 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2028 SM00237 Domains in Na-Ca exchangers and integrin-beta4 AH4AK4_2033 SM00028 Tetratricopeptide repeats AH4AK4_2033 SM00862 Transcriptional regulatory protein, C terminal AH4AK4_2041 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AH4AK4_2041 SM00091 PAS domain AH4AK4_2041 SM00387 Histidine kinase-like ATPases AH4AK4_2041 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_2041 SM00448 cheY-homologous receiver domain AH4AK4_2042 SM00091 PAS domain AH4AK4_2043 SM00448 cheY-homologous receiver domain AH4AK4_2043 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AH4AK4_2051 SM00491 AH4AK4_2051 AH4AK4_2056 SM00341 Helicase and RNase D C-terminal AH4AK4_2056 SM00474 3'-5' exonuclease AH4AK4_2059 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_2064 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2070 SM00421 helix_turn_helix, Lux Regulon AH4AK4_2071 SM00116 Domain in cystathionine beta-synthase and other proteins. AH4AK4_2072 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2072 SM00487 DEAD-like helicases superfamily AH4AK4_2072 SM00490 helicase superfamily c-terminal domain AH4AK4_2072 SM00847 Helicase associated domain (HA2) Add an annotation AH4AK4_2075 SM00387 Histidine kinase-like ATPases AH4AK4_2075 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_2075 SM00448 cheY-homologous receiver domain AH4AK4_2076 SM00448 cheY-homologous receiver domain AH4AK4_2076 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AH4AK4_2077 SM00849 Metallo-beta-lactamase superfamily AH4AK4_2078 SM00450 Rhodanese Homology Domain AH4AK4_2082 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AH4AK4_2083 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_2085 SM00880 AH4AK4_2085 AH4AK4_2091 SM00316 Ribosomal protein S1-like RNA-binding domain AH4AK4_2092 SM00363 S4 RNA-binding domain AH4AK4_2099 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AH4AK4_2100 SM00822 AH4AK4_2100 AH4AK4_2102 SM00825 Beta-ketoacyl synthase AH4AK4_2106 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2120 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2122 SM00981 AH4AK4_2122 AH4AK4_2129 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AH4AK4_2129 SM00245 tail specific protease AH4AK4_2130 SM00945 ProQ/FINO family AH4AK4_2141 SM00100 Cyclic nucleotide-monophosphate binding domain AH4AK4_2141 SM00419 helix_turn_helix, cAMP Regulatory protein AH4AK4_2148 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2152 SM00354 helix_turn _helix lactose operon repressor AH4AK4_2153 SM00267 diguanylate cyclase AH4AK4_2158 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_2158 SM00387 Histidine kinase-like ATPases AH4AK4_2158 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_2158 SM00448 cheY-homologous receiver domain AH4AK4_2159 SM00411 bacterial (prokaryotic) histone like domain AH4AK4_2160 SM00873 B3/4 domain AH4AK4_2160 SM00874 tRNA synthetase B5 domain AH4AK4_2160 SM00896 Ferredoxin-fold anticodon binding domain AH4AK4_2164 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AH4AK4_2166 SM00671 Sel1-like repeats. AH4AK4_2167 SM00729 Elongator protein 3, MiaB family, Radical SAM AH4AK4_2170 SM00434 DNA Topoisomerase IV AH4AK4_2176 SM00925 MltA specific insert domain AH4AK4_2181 SM00354 helix_turn _helix lactose operon repressor AH4AK4_2184 SM00953 AH4AK4_2184 AH4AK4_2190 SM00487 DEAD-like helicases superfamily AH4AK4_2190 SM00490 helicase superfamily c-terminal domain AH4AK4_2191 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_2194 SM00463 Small MutS-related domain AH4AK4_2199 SM00495 Chitin-binding domain type 3 AH4AK4_2201 SM00782 PhnA Zinc-Ribbon AH4AK4_2230 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_2234 SM01144 AH4AK4_2234 AH4AK4_2237 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AH4AK4_2239 SM00487 DEAD-like helicases superfamily AH4AK4_2239 SM00490 helicase superfamily c-terminal domain AH4AK4_2244 SM01118 AH4AK4_2244 AH4AK4_2257 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2258 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2259 SM00387 Histidine kinase-like ATPases AH4AK4_2259 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_2259 SM00448 cheY-homologous receiver domain AH4AK4_2275 SM00487 DEAD-like helicases superfamily AH4AK4_2275 SM00490 helicase superfamily c-terminal domain AH4AK4_2276 SM00763 PrkA AAA domain AH4AK4_2279 SM00345 helix_turn_helix gluconate operon transcriptional repressor AH4AK4_2284 SM00487 DEAD-like helicases superfamily AH4AK4_2284 SM00490 helicase superfamily c-terminal domain AH4AK4_2287 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_2291 SM00448 cheY-homologous receiver domain AH4AK4_2292 SM00387 Histidine kinase-like ATPases AH4AK4_2294 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_2294 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_2294 SM01049 AH4AK4_2294 AH4AK4_2313 SM00116 Domain in cystathionine beta-synthase and other proteins. AH4AK4_2320 SM00267 diguanylate cyclase AH4AK4_2321 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_2321 SM00871 Bacterial transcription activator, effector binding domain AH4AK4_2322 SM00822 AH4AK4_2322 AH4AK4_2334 SM01154 AH4AK4_2334 AH4AK4_2337 SM00528 Domain in histone-like proteins of HNS family AH4AK4_2342 SM01144 AH4AK4_2342 AH4AK4_2344 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AH4AK4_2345 SM00028 Tetratricopeptide repeats AH4AK4_2347 SM00411 bacterial (prokaryotic) histone like domain AH4AK4_2348 SM00316 Ribosomal protein S1-like RNA-binding domain AH4AK4_2357 SM00052 Putative diguanylate phosphodiesterase AH4AK4_2357 SM00267 diguanylate cyclase AH4AK4_2360 SM00448 cheY-homologous receiver domain AH4AK4_2361 SM00091 PAS domain AH4AK4_2366 SM00360 RNA recognition motif AH4AK4_2380 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AH4AK4_2381 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AH4AK4_2381 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AH4AK4_2390 SM01211 AH4AK4_2390 AH4AK4_2392 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_2395 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2396 SM00564 beta-propeller repeat AH4AK4_2400 SM00530 Helix-turn-helix XRE-family like proteins AH4AK4_2401 SM00028 Tetratricopeptide repeats AH4AK4_2403 SM00562 AH4AK4_2403 AH4AK4_2408 SM00271 DnaJ molecular chaperone homology domain AH4AK4_2418 SM00028 Tetratricopeptide repeats AH4AK4_2419 SM00450 Rhodanese Homology Domain AH4AK4_2422 SM01323 AH4AK4_2422 AH4AK4_2425 SM00116 Domain in cystathionine beta-synthase and other proteins. AH4AK4_2432 SM00344 helix_turn_helix ASNC type AH4AK4_2443 SM00354 helix_turn _helix lactose operon repressor AH4AK4_2444 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2450 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2459 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_2461 SM00479 AH4AK4_2461 AH4AK4_2466 SM00487 DEAD-like helicases superfamily AH4AK4_2466 SM00490 helicase superfamily c-terminal domain AH4AK4_2472 SM01091 Transporter associated domain AH4AK4_2485 SM00267 diguanylate cyclase AH4AK4_2486 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AH4AK4_2486 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_2489 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_2494 SM00882 Coenzyme A transferase AH4AK4_2495 SM00882 Coenzyme A transferase AH4AK4_2501 SM00829 Enoylreductase AH4AK4_2507 SM00635 Bacterial Ig-like domain 2 AH4AK4_2523 SM00859 Semialdehyde dehydrogenase, NAD binding domain AH4AK4_2525 SM00014 Acid phosphatase homologues AH4AK4_2529 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2539 SM00327 von Willebrand factor (vWF) type A domain AH4AK4_2540 SM00052 Putative diguanylate phosphodiesterase AH4AK4_2540 SM00267 diguanylate cyclase AH4AK4_2544 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2545 SM00729 Elongator protein 3, MiaB family, Radical SAM AH4AK4_2548 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2550 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_2551 SM00422 helix_turn_helix, mercury resistance AH4AK4_2554 SM01351 AH4AK4_2554 AH4AK4_2556 SM00487 DEAD-like helicases superfamily AH4AK4_2556 SM00490 helicase superfamily c-terminal domain AH4AK4_2561 SM00267 diguanylate cyclase AH4AK4_2562 SM00917 LeuA allosteric (dimerisation) domain AH4AK4_2564 SM00851 MGS-like domain AH4AK4_2564 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AH4AK4_2565 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AH4AK4_2574 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2576 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_2578 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2582 SM00899 AH4AK4_2582 AH4AK4_2591 SM00267 diguanylate cyclase AH4AK4_2593 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AH4AK4_2595 SM00840 AH4AK4_2595 AH4AK4_2602 SM00822 AH4AK4_2602 AH4AK4_2623 SM00671 Sel1-like repeats. AH4AK4_2661 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AH4AK4_2661 SM00465 GIY-YIG type nucleases (URI domain) AH4AK4_2663 SM00421 helix_turn_helix, Lux Regulon AH4AK4_2663 SM00448 cheY-homologous receiver domain AH4AK4_2667 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2668 SM00849 Metallo-beta-lactamase superfamily AH4AK4_2675 SM00491 AH4AK4_2675 AH4AK4_2680 SM00098 Alkaline phosphatase homologues AH4AK4_2681 SM00098 Alkaline phosphatase homologues AH4AK4_2685 SM00421 helix_turn_helix, Lux Regulon AH4AK4_2685 SM00448 cheY-homologous receiver domain AH4AK4_2686 SM00387 Histidine kinase-like ATPases AH4AK4_2688 SM00267 diguanylate cyclase AH4AK4_2689 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_2689 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AH4AK4_2693 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2699 SM01091 Transporter associated domain AH4AK4_2701 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2716 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2716 SM00448 cheY-homologous receiver domain AH4AK4_2717 SM00091 PAS domain AH4AK4_2717 SM00387 Histidine kinase-like ATPases AH4AK4_2717 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_2718 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2724 SM00116 Domain in cystathionine beta-synthase and other proteins. AH4AK4_2724 SM00924 MgtE intracellular N domain AH4AK4_2727 SM00047 Lysozyme subfamily 2 AH4AK4_2736 SM00138 Methyltransferase, chemotaxis proteins AH4AK4_2737 SM00260 Two component signalling adaptor domain AH4AK4_2737 SM00448 cheY-homologous receiver domain AH4AK4_2738 SM00858 AH4AK4_2738 AH4AK4_2744 SM00363 S4 RNA-binding domain AH4AK4_2745 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AH4AK4_2753 SM00357 Cold shock protein domain AH4AK4_2755 SM00861 Transketolase, pyrimidine binding domain AH4AK4_2761 SM00487 DEAD-like helicases superfamily AH4AK4_2761 SM00490 helicase superfamily c-terminal domain AH4AK4_2766 SM00984 UDP binding domain AH4AK4_2780 SM00448 cheY-homologous receiver domain AH4AK4_2780 SM00862 Transcriptional regulatory protein, C terminal AH4AK4_2781 SM00387 Histidine kinase-like ATPases AH4AK4_2790 SM00481 DNA polymerase alpha chain like domain AH4AK4_2825 SM00363 S4 RNA-binding domain AH4AK4_2829 SM00481 DNA polymerase alpha chain like domain AH4AK4_2845 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_2846 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2867 SM00028 Tetratricopeptide repeats AH4AK4_2867 SM00448 cheY-homologous receiver domain AH4AK4_2876 SM00091 PAS domain AH4AK4_2876 SM00267 diguanylate cyclase AH4AK4_2879 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2883 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AH4AK4_2886 SM00354 helix_turn _helix lactose operon repressor AH4AK4_2887 SM00640 Glycosyl hydrolases family 32 AH4AK4_2891 SM00271 DnaJ molecular chaperone homology domain AH4AK4_2895 SM00267 diguanylate cyclase AH4AK4_2897 SM01131 AH4AK4_2897 AH4AK4_2900 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2905 SM00528 Domain in histone-like proteins of HNS family AH4AK4_2911 SM01329 AH4AK4_2911 AH4AK4_2912 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_2919 SM00635 Bacterial Ig-like domain 2 AH4AK4_2931 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AH4AK4_2940 SM00919 Malic enzyme, NAD binding domain AH4AK4_2940 SM01274 AH4AK4_2940 AH4AK4_2944 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AH4AK4_2947 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AH4AK4_2947 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_2958 SM00530 Helix-turn-helix XRE-family like proteins AH4AK4_2970 SM00448 cheY-homologous receiver domain AH4AK4_2970 SM00862 Transcriptional regulatory protein, C terminal AH4AK4_2973 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2974 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2981 SM00382 ATPases associated with a variety of cellular activities AH4AK4_2994 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3001 SM00530 Helix-turn-helix XRE-family like proteins AH4AK4_3010 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_3010 SM00091 PAS domain AH4AK4_3010 SM00387 Histidine kinase-like ATPases AH4AK4_3010 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_3010 SM00448 cheY-homologous receiver domain AH4AK4_3016 SM00091 PAS domain AH4AK4_3016 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_3016 SM00387 Histidine kinase-like ATPases AH4AK4_3016 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_3016 SM00448 cheY-homologous receiver domain AH4AK4_3037 SM00155 Phospholipase D. Active site motifs. AH4AK4_3049 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3050 SM00729 Elongator protein 3, MiaB family, Radical SAM AH4AK4_3054 SM00267 diguanylate cyclase AH4AK4_3057 SM00530 Helix-turn-helix XRE-family like proteins AH4AK4_3063 SM00919 Malic enzyme, NAD binding domain AH4AK4_3063 SM01274 AH4AK4_3063 AH4AK4_3064 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_3068 SM00267 diguanylate cyclase AH4AK4_3078 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3081 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_3085 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3092 SM00091 PAS domain AH4AK4_3092 SM00387 Histidine kinase-like ATPases AH4AK4_3092 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_3093 SM00448 cheY-homologous receiver domain AH4AK4_3093 SM00862 Transcriptional regulatory protein, C terminal AH4AK4_3095 SM00267 diguanylate cyclase AH4AK4_3096 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3099 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_3101 SM00448 cheY-homologous receiver domain AH4AK4_3102 SM00387 Histidine kinase-like ATPases AH4AK4_3103 SM00919 Malic enzyme, NAD binding domain AH4AK4_3103 SM01274 AH4AK4_3103 AH4AK4_3106 SM00347 helix_turn_helix multiple antibiotic resistance protein AH4AK4_3115 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AH4AK4_3115 SM00292 breast cancer carboxy-terminal domain AH4AK4_3115 SM00532 Ligase N family AH4AK4_3116 SM00771 ZipA, C-terminal domain (FtsZ-binding) AH4AK4_3123 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_3128 SM00642 Alpha-amylase domain AH4AK4_3130 SM00421 helix_turn_helix, Lux Regulon AH4AK4_3130 SM00448 cheY-homologous receiver domain AH4AK4_3135 SM00267 diguanylate cyclase AH4AK4_3136 SM00977 TilS substrate C-terminal domain AH4AK4_3139 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3145 SM01068 Putative carbohydrate binding domain AH4AK4_3146 SM00100 Cyclic nucleotide-monophosphate binding domain AH4AK4_3146 SM00419 helix_turn_helix, cAMP Regulatory protein AH4AK4_3148 SM00749 bacterial OsmY and nodulation domain AH4AK4_3150 SM00481 DNA polymerase alpha chain like domain AH4AK4_3156 SM00935 Outer membrane protein (OmpH-like) AH4AK4_3158 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AH4AK4_3168 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AH4AK4_3185 SM00028 Tetratricopeptide repeats AH4AK4_3186 SM00267 diguanylate cyclase AH4AK4_3189 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AH4AK4_3189 SM00475 5'-3' exonuclease AH4AK4_3190 SM01329 AH4AK4_3190 AH4AK4_3196 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_3196 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_3204 SM00900 AH4AK4_3204 AH4AK4_3225 SM00421 helix_turn_helix, Lux Regulon AH4AK4_3226 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AH4AK4_3231 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AH4AK4_3233 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3235 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AH4AK4_3236 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AH4AK4_3238 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_3238 SM00387 Histidine kinase-like ATPases AH4AK4_3238 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_3239 SM00448 cheY-homologous receiver domain AH4AK4_3239 SM00862 Transcriptional regulatory protein, C terminal AH4AK4_3259 SM00422 helix_turn_helix, mercury resistance AH4AK4_3266 SM00830 Chorismate mutase type II AH4AK4_3272 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3274 SM00028 Tetratricopeptide repeats AH4AK4_3275 SM00112 Cadherin repeats. AH4AK4_3275 SM00736 Dystroglycan-type cadherin-like domains. AH4AK4_3280 SM00420 helix_turn_helix, Deoxyribose operon repressor AH4AK4_3280 SM01134 AH4AK4_3280 AH4AK4_3283 SM01007 Class II Aldolase and Adducin N-terminal domain AH4AK4_3288 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_3288 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_3295 SM00463 Small MutS-related domain AH4AK4_3297 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_3297 SM00478 endonuclease III AH4AK4_3297 SM01009 AlkA N-terminal domain AH4AK4_3311 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_3311 SM00387 Histidine kinase-like ATPases AH4AK4_3311 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_3311 SM00448 cheY-homologous receiver domain AH4AK4_3312 SM00421 helix_turn_helix, Lux Regulon AH4AK4_3312 SM00448 cheY-homologous receiver domain AH4AK4_3317 SM00052 Putative diguanylate phosphodiesterase AH4AK4_3319 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AH4AK4_3322 SM00387 Histidine kinase-like ATPases AH4AK4_3322 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_3323 SM00421 helix_turn_helix, Lux Regulon AH4AK4_3323 SM00448 cheY-homologous receiver domain AH4AK4_3328 SM01005 Alanine racemase, C-terminal domain AH4AK4_3329 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3331 SM00978 AH4AK4_3331 AH4AK4_3336 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3336 SM00448 cheY-homologous receiver domain AH4AK4_3338 SM00320 WD40 repeats AH4AK4_3343 SM00260 Two component signalling adaptor domain AH4AK4_3343 SM00448 cheY-homologous receiver domain AH4AK4_3345 SM00267 diguanylate cyclase AH4AK4_3351 SM00100 Cyclic nucleotide-monophosphate binding domain AH4AK4_3351 SM00419 helix_turn_helix, cAMP Regulatory protein AH4AK4_3354 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AH4AK4_3354 SM00495 Chitin-binding domain type 3 AH4AK4_3355 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AH4AK4_3355 SM00495 Chitin-binding domain type 3 AH4AK4_3355 SM00636 AH4AK4_3355 AH4AK4_3356 SM00387 Histidine kinase-like ATPases AH4AK4_3356 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_3356 SM00448 cheY-homologous receiver domain AH4AK4_3366 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3369 SM00984 UDP binding domain AH4AK4_3372 SM01259 AH4AK4_3372 AH4AK4_3376 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3379 SM00271 DnaJ molecular chaperone homology domain AH4AK4_3385 SM00650 Ribosomal RNA adenine dimethylases AH4AK4_3388 SM00530 Helix-turn-helix XRE-family like proteins AH4AK4_3391 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AH4AK4_3397 SM00244 prohibitin homologues AH4AK4_3398 SM00244 prohibitin homologues AH4AK4_3402 SM00853 MutL C terminal dimerisation domain AH4AK4_3402 SM01340 AH4AK4_3402 AH4AK4_3403 SM00257 Lysin motif AH4AK4_3403 SM00646 AH4AK4_3403 AH4AK4_3410 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3410 SM00930 AH4AK4_3410 AH4AK4_3413 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AH4AK4_3414 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_3414 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_3415 SM00052 Putative diguanylate phosphodiesterase AH4AK4_3415 SM00448 cheY-homologous receiver domain AH4AK4_3416 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_3416 SM00073 Histidine Phosphotransfer domain AH4AK4_3416 SM00387 Histidine kinase-like ATPases AH4AK4_3416 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_3416 SM00448 cheY-homologous receiver domain AH4AK4_3418 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AH4AK4_3419 SM00073 Histidine Phosphotransfer domain AH4AK4_3419 SM00091 PAS domain AH4AK4_3419 SM00387 Histidine kinase-like ATPases AH4AK4_3419 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_3419 SM00448 cheY-homologous receiver domain AH4AK4_3428 SM01130 AH4AK4_3428 AH4AK4_3439 SM00014 Acid phosphatase homologues AH4AK4_3441 SM00917 LeuA allosteric (dimerisation) domain AH4AK4_3442 SM01329 AH4AK4_3442 AH4AK4_3449 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3450 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3450 SM00670 Large family of predicted nucleotide-binding domains AH4AK4_3466 SM00014 Acid phosphatase homologues AH4AK4_3473 SM00487 DEAD-like helicases superfamily AH4AK4_3473 SM00490 helicase superfamily c-terminal domain AH4AK4_3473 SM00847 Helicase associated domain (HA2) Add an annotation AH4AK4_3485 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3496 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3500 SM00091 PAS domain AH4AK4_3500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_3508 SM00244 prohibitin homologues AH4AK4_3514 SM00729 Elongator protein 3, MiaB family, Radical SAM AH4AK4_3517 SM00422 helix_turn_helix, mercury resistance AH4AK4_3519 SM00798 AICARFT/IMPCHase bienzyme AH4AK4_3519 SM00851 MGS-like domain AH4AK4_3520 SM01209 AH4AK4_3520 AH4AK4_3520 SM01210 AH4AK4_3520 AH4AK4_3523 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AH4AK4_3523 SM00632 AH4AK4_3523 AH4AK4_3523 SM00642 Alpha-amylase domain AH4AK4_3524 SM00028 Tetratricopeptide repeats AH4AK4_3527 SM00400 zinc finger AH4AK4_3527 SM00493 AH4AK4_3527 AH4AK4_3527 SM00766 DNA primase DnaG DnaB-binding AH4AK4_3532 SM00257 Lysin motif AH4AK4_3540 SM01192 AH4AK4_3540 AH4AK4_3540 SM01193 AH4AK4_3540 AH4AK4_3543 SM00954 Region found in RelA / SpoT proteins AH4AK4_3545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_3545 SM00387 Histidine kinase-like ATPases AH4AK4_3545 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_3545 SM00448 cheY-homologous receiver domain AH4AK4_3547 SM00644 AH4AK4_3547 AH4AK4_3551 SM00358 Double-stranded RNA binding motif AH4AK4_3551 SM00535 Ribonuclease III family AH4AK4_3571 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AH4AK4_3575 SM00287 Bacterial SH3 domain homologues AH4AK4_3577 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_3577 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_3580 SM00822 AH4AK4_3580 AH4AK4_3586 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3587 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_3589 SM01266 AH4AK4_3589 AH4AK4_3592 SM00635 Bacterial Ig-like domain 2 AH4AK4_3593 SM00635 Bacterial Ig-like domain 2 AH4AK4_3606 SM00859 Semialdehyde dehydrogenase, NAD binding domain AH4AK4_3610 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AH4AK4_3610 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AH4AK4_3610 SM00267 diguanylate cyclase AH4AK4_3613 SM00450 Rhodanese Homology Domain AH4AK4_3615 SM00345 helix_turn_helix gluconate operon transcriptional repressor AH4AK4_3623 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_3632 SM00421 helix_turn_helix, Lux Regulon AH4AK4_3642 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3645 SM00363 S4 RNA-binding domain AH4AK4_3648 SM00345 helix_turn_helix gluconate operon transcriptional repressor AH4AK4_3648 SM00895 AH4AK4_3648 AH4AK4_3652 SM01118 AH4AK4_3652 AH4AK4_3656 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3658 SM00478 endonuclease III AH4AK4_3658 SM00525 AH4AK4_3658 AH4AK4_3671 SM00267 diguanylate cyclase AH4AK4_3672 SM01130 AH4AK4_3672 AH4AK4_3685 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3703 SM00851 MGS-like domain AH4AK4_3706 SM00870 AH4AK4_3706 AH4AK4_3708 SM00354 helix_turn _helix lactose operon repressor AH4AK4_3718 SM00354 helix_turn _helix lactose operon repressor AH4AK4_3720 SM00642 Alpha-amylase domain AH4AK4_3721 SM01266 AH4AK4_3721 AH4AK4_3722 SM00344 helix_turn_helix ASNC type AH4AK4_3733 SM01207 AH4AK4_3733 AH4AK4_3734 SM00905 Dihydroneopterin aldolase AH4AK4_3736 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_3736 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_3736 SM01358 AH4AK4_3736 AH4AK4_3738 SM00833 Cobalamin synthesis protein cobW C-terminal domain AH4AK4_3743 SM00822 AH4AK4_3743 AH4AK4_3744 SM00052 Putative diguanylate phosphodiesterase AH4AK4_3745 SM00052 Putative diguanylate phosphodiesterase AH4AK4_3748 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_3748 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_3749 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_3751 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AH4AK4_3751 SM00267 diguanylate cyclase AH4AK4_3755 SM00345 helix_turn_helix gluconate operon transcriptional repressor AH4AK4_3755 SM00895 AH4AK4_3755 AH4AK4_3756 SM00644 AH4AK4_3756 AH4AK4_3766 SM00957 SecA DEAD-like domain AH4AK4_3766 SM00958 SecA preprotein cross-linking domain AH4AK4_3769 SM00864 Tubulin/FtsZ family, GTPase domain AH4AK4_3769 SM00865 Tubulin/FtsZ family, C-terminal domain AH4AK4_3770 SM00842 Cell division protein FtsA AH4AK4_3808 SM00858 AH4AK4_3808 AH4AK4_3817 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3817 SM00448 cheY-homologous receiver domain AH4AK4_3829 SM00749 bacterial OsmY and nodulation domain AH4AK4_3839 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AH4AK4_3840 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AH4AK4_3855 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3859 SM00116 Domain in cystathionine beta-synthase and other proteins. AH4AK4_3860 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3877 SM00530 Helix-turn-helix XRE-family like proteins AH4AK4_3883 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_3883 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_3887 SM00421 helix_turn_helix, Lux Regulon AH4AK4_3889 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_3892 SM00357 Cold shock protein domain AH4AK4_3895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_3895 SM00387 Histidine kinase-like ATPases AH4AK4_3895 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_3896 SM00448 cheY-homologous receiver domain AH4AK4_3896 SM00862 Transcriptional regulatory protein, C terminal AH4AK4_3899 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_3899 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_3901 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AH4AK4_3901 SM00091 PAS domain AH4AK4_3901 SM00267 diguanylate cyclase AH4AK4_3902 SM00938 Nitrogen regulatory protein P-II AH4AK4_3904 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_3918 SM00530 Helix-turn-helix XRE-family like proteins AH4AK4_3919 SM00345 helix_turn_helix gluconate operon transcriptional repressor AH4AK4_3919 SM00866 AH4AK4_3919 AH4AK4_3924 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3926 SM00267 diguanylate cyclase AH4AK4_3929 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_3929 SM00871 Bacterial transcription activator, effector binding domain AH4AK4_3931 SM01060 AH4AK4_3931 AH4AK4_3935 SM00014 Acid phosphatase homologues AH4AK4_3937 SM00822 AH4AK4_3937 AH4AK4_3939 SM00091 PAS domain AH4AK4_3941 SM01120 AH4AK4_3941 AH4AK4_3952 SM00838 Elongation factor G C-terminus AH4AK4_3952 SM00889 Elongation factor G, domain IV AH4AK4_3960 SM00663 RNA polymerase I subunit A N-terminus AH4AK4_3965 SM00649 Ribosomal protein L11/L12 AH4AK4_3966 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AH4AK4_3966 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AH4AK4_3978 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AH4AK4_3978 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AH4AK4_3978 SM00493 AH4AK4_3978 AH4AK4_3982 SM00387 Histidine kinase-like ATPases AH4AK4_3983 SM00448 cheY-homologous receiver domain AH4AK4_3983 SM00862 Transcriptional regulatory protein, C terminal AH4AK4_3989 SM00382 ATPases associated with a variety of cellular activities AH4AK4_3989 SM00448 cheY-homologous receiver domain AH4AK4_3991 SM00387 Histidine kinase-like ATPases AH4AK4_3991 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_3997 SM00062 Bacterial periplasmic substrate-binding proteins AH4AK4_3998 SM00344 helix_turn_helix ASNC type AH4AK4_4000 SM00849 Metallo-beta-lactamase superfamily AH4AK4_4001 SM00382 ATPases associated with a variety of cellular activities AH4AK4_4001 SM01086 C-terminal, D2-small domain, of ClpB protein AH4AK4_4003 SM00363 S4 RNA-binding domain AH4AK4_4009 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AH4AK4_4009 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AH4AK4_4011 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_4014 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_4014 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_4028 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AH4AK4_4028 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_4030 SM00382 ATPases associated with a variety of cellular activities AH4AK4_4032 SM01038 Beta galactosidase small chain AH4AK4_4033 SM00354 helix_turn _helix lactose operon repressor AH4AK4_4041 SM00354 helix_turn _helix lactose operon repressor AH4AK4_4046 SM00382 ATPases associated with a variety of cellular activities AH4AK4_4053 SM00464 Found in ATP-dependent protease La (LON) AH4AK4_4054 SM00836 DALR anticodon binding domain AH4AK4_4054 SM01016 Arginyl tRNA synthetase N terminal dom AH4AK4_4057 SM00382 ATPases associated with a variety of cellular activities AH4AK4_4057 SM01086 C-terminal, D2-small domain, of ClpB protein AH4AK4_4062 SM00382 ATPases associated with a variety of cellular activities AH4AK4_4073 SM00924 MgtE intracellular N domain AH4AK4_4079 SM00341 Helicase and RNase D C-terminal AH4AK4_4079 SM00487 DEAD-like helicases superfamily AH4AK4_4079 SM00490 helicase superfamily c-terminal domain AH4AK4_4079 SM00956 AH4AK4_4079 AH4AK4_4086 SM00382 ATPases associated with a variety of cellular activities AH4AK4_4092 SM01230 AH4AK4_4092 AH4AK4_4101 SM00642 Alpha-amylase domain AH4AK4_4105 SM00448 cheY-homologous receiver domain AH4AK4_4105 SM00862 Transcriptional regulatory protein, C terminal AH4AK4_4106 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_4106 SM00387 Histidine kinase-like ATPases AH4AK4_4106 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_4108 SM00919 Malic enzyme, NAD binding domain AH4AK4_4108 SM01274 AH4AK4_4108 AH4AK4_4111 SM00487 DEAD-like helicases superfamily AH4AK4_4111 SM00490 helicase superfamily c-terminal domain AH4AK4_4118 SM00382 ATPases associated with a variety of cellular activities AH4AK4_4119 SM00563 Phosphate acyltransferases AH4AK4_4120 SM00563 Phosphate acyltransferases AH4AK4_4128 SM00267 diguanylate cyclase AH4AK4_4129 SM00422 helix_turn_helix, mercury resistance AH4AK4_4141 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AH4AK4_4141 SM01232 AH4AK4_4141 AH4AK4_4153 SM00881 CoA binding domain AH4AK4_4166 SM00448 cheY-homologous receiver domain AH4AK4_4166 SM00862 Transcriptional regulatory protein, C terminal AH4AK4_4167 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AH4AK4_4167 SM00387 Histidine kinase-like ATPases AH4AK4_4167 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_4180 SM00836 DALR anticodon binding domain AH4AK4_4182 SM01321 AH4AK4_4182 AH4AK4_4184 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AH4AK4_4192 SM00849 Metallo-beta-lactamase superfamily AH4AK4_4193 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AH4AK4_4193 SM00382 ATPases associated with a variety of cellular activities AH4AK4_4194 SM00354 helix_turn _helix lactose operon repressor AH4AK4_4198 SM00382 ATPases associated with a variety of cellular activities AH4AK4_4199 SM00382 ATPases associated with a variety of cellular activities AH4AK4_4200 SM00342 helix_turn_helix, arabinose operon control protein AH4AK4_4202 SM00450 Rhodanese Homology Domain AH4AK4_4209 SM00357 Cold shock protein domain AH4AK4_4209 SM00382 ATPases associated with a variety of cellular activities AH4AK4_4209 SM00959 Rho termination factor, N-terminal domain AH4AK4_4211 SM00487 DEAD-like helicases superfamily AH4AK4_4211 SM00490 helicase superfamily c-terminal domain AH4AK4_4216 SM00052 Putative diguanylate phosphodiesterase AH4AK4_4216 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AH4AK4_4216 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AH4AK4_4216 SM00091 PAS domain AH4AK4_4216 SM00267 diguanylate cyclase AH4AK4_4219 SM01004 Delta-aminolevulinic acid dehydratase AH4AK4_4241 SM00421 helix_turn_helix, Lux Regulon AH4AK4_4243 SM00420 helix_turn_helix, Deoxyribose operon repressor AH4AK4_4243 SM01134 AH4AK4_4243 AH4AK4_4244 SM00448 cheY-homologous receiver domain AH4AK4_4244 SM00862 Transcriptional regulatory protein, C terminal AH4AK4_4245 SM00387 Histidine kinase-like ATPases AH4AK4_4245 SM00388 His Kinase A (phosphoacceptor) domain AH4AK4_4250 SM00382 ATPases associated with a variety of cellular activities AH4AK4_4257 SM00470 ParB-like nuclease domain AH4AK4_4260 SM01228 AH4AK4_4260 AH4AK4_4263 SM00382 ATPases associated with a variety of cellular activities AH4AK4_4264 SM00382 ATPases associated with a variety of cellular activities AH4AK4_4270 SM00382 ATPases associated with a variety of cellular activities AH4AK4_4272 SM00062 Bacterial periplasmic substrate-binding proteins