TK34_00005 SM00382 ATPases associated with a variety of cellular activities TK34_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain TK34_00010 SM00480 DNA polymerase III beta subunit TK34_00020 SM00387 Histidine kinase-like ATPases TK34_00020 SM00433 TopoisomeraseII TK34_00055 SM00342 helix_turn_helix, arabinose operon control protein TK34_00065 SM00448 cheY-homologous receiver domain TK34_00065 SM00862 Transcriptional regulatory protein, C terminal TK34_00070 SM00387 Histidine kinase-like ATPases TK34_00070 SM00388 His Kinase A (phosphoacceptor) domain TK34_00095 SM00091 PAS domain TK34_00095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_00095 SM00387 Histidine kinase-like ATPases TK34_00135 SM00458 Ricin-type beta-trefoil TK34_00155 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TK34_00155 SM00954 Region found in RelA / SpoT proteins TK34_00160 SM01409 TK34_00160 TK34_00165 SM00072 Guanylate kinase homologues. TK34_00180 SM00267 diguanylate cyclase TK34_00220 SM00267 diguanylate cyclase TK34_00245 SM00387 Histidine kinase-like ATPases TK34_00250 SM00448 cheY-homologous receiver domain TK34_00250 SM00850 LytTr DNA-binding domain TK34_00265 SM01001 AIR carboxylase TK34_00295 SM00360 RNA recognition motif TK34_00350 SM00052 Putative diguanylate phosphodiesterase TK34_00350 SM00267 diguanylate cyclase TK34_00360 SM00829 Enoylreductase TK34_00430 SM00422 helix_turn_helix, mercury resistance TK34_00435 SM00267 diguanylate cyclase TK34_00465 SM00382 ATPases associated with a variety of cellular activities TK34_00470 SM00062 Bacterial periplasmic substrate-binding proteins TK34_00495 SM00563 Phosphate acyltransferases TK34_00500 SM00563 Phosphate acyltransferases TK34_00535 SM00530 Helix-turn-helix XRE-family like proteins TK34_00595 SM00487 DEAD-like helicases superfamily TK34_00595 SM00490 helicase superfamily c-terminal domain TK34_00610 SM00919 Malic enzyme, NAD binding domain TK34_00610 SM01274 TK34_00610 TK34_00620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_00620 SM00387 Histidine kinase-like ATPases TK34_00620 SM00388 His Kinase A (phosphoacceptor) domain TK34_00625 SM00448 cheY-homologous receiver domain TK34_00625 SM00862 Transcriptional regulatory protein, C terminal TK34_00685 SM00858 TK34_00685 TK34_00710 SM00822 TK34_00710 TK34_00760 SM00642 Alpha-amylase domain TK34_00805 SM01230 TK34_00805 TK34_00825 SM00382 ATPases associated with a variety of cellular activities TK34_00860 SM00341 Helicase and RNase D C-terminal TK34_00860 SM00487 DEAD-like helicases superfamily TK34_00860 SM00490 helicase superfamily c-terminal domain TK34_00860 SM00956 TK34_00860 TK34_00890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_00890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_00890 SM01358 TK34_00890 TK34_00895 SM00924 MgtE intracellular N domain TK34_00930 SM00382 ATPases associated with a variety of cellular activities TK34_00930 SM01086 C-terminal, D2-small domain, of ClpB protein TK34_00945 SM00836 DALR anticodon binding domain TK34_00945 SM01016 Arginyl tRNA synthetase N terminal dom TK34_00950 SM00464 Found in ATP-dependent protease La (LON) TK34_00995 SM00354 helix_turn _helix lactose operon repressor TK34_01000 SM01038 Beta galactosidase small chain TK34_01010 SM00382 ATPases associated with a variety of cellular activities TK34_01020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_01020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_01085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_01085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_01095 SM00342 helix_turn_helix, arabinose operon control protein TK34_01105 SM01002 Alanine dehydrogenase/PNT, C-terminal domain TK34_01105 SM01003 Alanine dehydrogenase/PNT, N-terminal domain TK34_01140 SM00363 S4 RNA-binding domain TK34_01150 SM00382 ATPases associated with a variety of cellular activities TK34_01150 SM01086 C-terminal, D2-small domain, of ClpB protein TK34_01155 SM00849 Metallo-beta-lactamase superfamily TK34_01165 SM00344 helix_turn_helix ASNC type TK34_01170 SM00062 Bacterial periplasmic substrate-binding proteins TK34_01180 SM00116 Domain in cystathionine beta-synthase and other proteins. TK34_01195 SM00387 Histidine kinase-like ATPases TK34_01195 SM00388 His Kinase A (phosphoacceptor) domain TK34_01205 SM00382 ATPases associated with a variety of cellular activities TK34_01205 SM00448 cheY-homologous receiver domain TK34_01235 SM00448 cheY-homologous receiver domain TK34_01235 SM00862 Transcriptional regulatory protein, C terminal TK34_01240 SM00387 Histidine kinase-like ATPases TK34_01260 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain TK34_01260 SM00437 Bacterial DNA topoisomerase I DNA-binding domain TK34_01260 SM00493 TK34_01260 TK34_01275 SM00342 helix_turn_helix, arabinose operon control protein TK34_01330 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. TK34_01330 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TK34_01335 SM00649 Ribosomal protein L11/L12 TK34_01360 SM00663 RNA polymerase I subunit A N-terminus TK34_01400 SM00838 Elongation factor G C-terminus TK34_01400 SM00889 Elongation factor G, domain IV TK34_01410 SM01126 TK34_01410 TK34_01465 SM01120 TK34_01465 TK34_01480 SM00091 PAS domain TK34_01505 SM00014 Acid phosphatase homologues TK34_01530 SM01060 TK34_01530 TK34_01540 SM00342 helix_turn_helix, arabinose operon control protein TK34_01540 SM00871 Bacterial transcription activator, effector binding domain TK34_01555 SM00267 diguanylate cyclase TK34_01565 SM00382 ATPases associated with a variety of cellular activities TK34_01590 SM00345 helix_turn_helix gluconate operon transcriptional repressor TK34_01590 SM00866 TK34_01590 TK34_01595 SM00530 Helix-turn-helix XRE-family like proteins TK34_01620 SM01126 TK34_01620 TK34_01645 SM00342 helix_turn_helix, arabinose operon control protein TK34_01650 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TK34_01650 SM00091 PAS domain TK34_01650 SM00267 diguanylate cyclase TK34_01660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_01660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_01680 SM00448 cheY-homologous receiver domain TK34_01680 SM00862 Transcriptional regulatory protein, C terminal TK34_01685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_01685 SM00387 Histidine kinase-like ATPases TK34_01685 SM00388 His Kinase A (phosphoacceptor) domain TK34_01690 SM00062 Bacterial periplasmic substrate-binding proteins TK34_01690 SM00267 diguanylate cyclase TK34_01705 SM00357 Cold shock protein domain TK34_01720 SM00062 Bacterial periplasmic substrate-binding proteins TK34_01730 SM00421 helix_turn_helix, Lux Regulon TK34_01740 SM00267 diguanylate cyclase TK34_01750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_01750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_01780 SM00530 Helix-turn-helix XRE-family like proteins TK34_01860 SM00382 ATPases associated with a variety of cellular activities TK34_01865 SM00116 Domain in cystathionine beta-synthase and other proteins. TK34_01885 SM00382 ATPases associated with a variety of cellular activities TK34_01960 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TK34_01965 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TK34_02015 SM00749 bacterial OsmY and nodulation domain TK34_02075 SM00382 ATPases associated with a variety of cellular activities TK34_02075 SM00448 cheY-homologous receiver domain TK34_02120 SM00858 TK34_02120 TK34_02310 SM00842 Cell division protein FtsA TK34_02315 SM00864 Tubulin/FtsZ family, GTPase domain TK34_02315 SM00865 Tubulin/FtsZ family, C-terminal domain TK34_02330 SM00957 SecA DEAD-like domain TK34_02330 SM00958 SecA preprotein cross-linking domain TK34_02345 SM01126 TK34_02345 TK34_02400 SM00644 TK34_02400 TK34_02405 SM00345 helix_turn_helix gluconate operon transcriptional repressor TK34_02405 SM00895 TK34_02405 TK34_02425 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TK34_02425 SM00267 diguanylate cyclase TK34_02435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_02440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_02440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_02455 SM01126 TK34_02455 TK34_02475 SM00833 Cobalamin synthesis protein cobW C-terminal domain TK34_02495 SM00905 Dihydroneopterin aldolase TK34_02500 SM01207 TK34_02500 TK34_02575 SM00260 Two component signalling adaptor domain TK34_02575 SM00448 cheY-homologous receiver domain TK34_02585 SM00382 ATPases associated with a variety of cellular activities TK34_02610 SM00851 MGS-like domain TK34_02625 SM00870 TK34_02625 TK34_02640 SM00354 helix_turn _helix lactose operon repressor TK34_02650 SM00642 Alpha-amylase domain TK34_02655 SM01266 TK34_02655 TK34_02660 SM00344 helix_turn_helix ASNC type TK34_02690 SM00382 ATPases associated with a variety of cellular activities TK34_02760 SM01130 TK34_02760 TK34_02765 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TK34_02765 SM00267 diguanylate cyclase TK34_02805 SM00062 Bacterial periplasmic substrate-binding proteins TK34_02830 SM00478 endonuclease III TK34_02830 SM00525 TK34_02830 TK34_02840 SM00382 ATPases associated with a variety of cellular activities TK34_02845 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TK34_02880 SM00345 helix_turn_helix gluconate operon transcriptional repressor TK34_02890 SM00450 Rhodanese Homology Domain TK34_02915 SM01118 TK34_02915 TK34_02950 SM01126 TK34_02950 TK34_02990 SM00387 Histidine kinase-like ATPases TK34_02990 SM00433 TopoisomeraseII TK34_02995 SM00434 DNA Topoisomerase IV TK34_03030 SM00271 DnaJ molecular chaperone homology domain TK34_03060 SM00563 Phosphate acyltransferases TK34_03095 SM00986 Uracil DNA glycosylase superfamily TK34_03095 SM00987 UreE urease accessory protein, C-terminal domain TK34_03115 SM00382 ATPases associated with a variety of cellular activities TK34_03155 SM00347 helix_turn_helix multiple antibiotic resistance protein TK34_03170 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TK34_03170 SM00534 ATPase domain of DNA mismatch repair MUTS family TK34_03180 SM00382 ATPases associated with a variety of cellular activities TK34_03190 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TK34_03245 SM01091 Transporter associated domain TK34_03440 SM00530 Helix-turn-helix XRE-family like proteins TK34_03465 SM00530 Helix-turn-helix XRE-family like proteins TK34_03510 SM01133 TK34_03510 TK34_03515 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain TK34_03530 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TK34_03530 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TK34_03530 SM00091 PAS domain TK34_03530 SM00267 diguanylate cyclase TK34_03555 SM00382 ATPases associated with a variety of cellular activities TK34_03570 SM00411 bacterial (prokaryotic) histone like domain TK34_03615 SM00487 DEAD-like helicases superfamily TK34_03615 SM00490 helicase superfamily c-terminal domain TK34_03630 SM00382 ATPases associated with a variety of cellular activities TK34_03650 SM01152 TK34_03650 TK34_03715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_03715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_03720 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TK34_03725 SM00382 ATPases associated with a variety of cellular activities TK34_03855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_03855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_03870 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TK34_03880 SM00642 Alpha-amylase domain TK34_03885 SM00642 Alpha-amylase domain TK34_03905 SM00829 Enoylreductase TK34_03915 SM00347 helix_turn_helix multiple antibiotic resistance protein TK34_03930 SM00344 helix_turn_helix ASNC type TK34_03995 SM00345 helix_turn_helix gluconate operon transcriptional repressor TK34_04090 SM00382 ATPases associated with a variety of cellular activities TK34_04095 SM00116 Domain in cystathionine beta-synthase and other proteins. TK34_04105 SM00244 prohibitin homologues TK34_04165 SM00382 ATPases associated with a variety of cellular activities TK34_04220 SM00382 ATPases associated with a variety of cellular activities TK34_04250 SM00450 Rhodanese Homology Domain TK34_04295 SM00487 DEAD-like helicases superfamily TK34_04295 SM00490 helicase superfamily c-terminal domain TK34_04295 SM00847 Helicase associated domain (HA2) Add an annotation TK34_04325 SM00448 cheY-homologous receiver domain TK34_04325 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TK34_04335 SM00014 Acid phosphatase homologues TK34_04405 SM00670 Large family of predicted nucleotide-binding domains TK34_04410 SM00382 ATPases associated with a variety of cellular activities TK34_04445 SM01329 TK34_04445 TK34_04450 SM00917 LeuA allosteric (dimerisation) domain TK34_04460 SM00014 Acid phosphatase homologues TK34_04510 SM01130 TK34_04510 TK34_04555 SM00073 Histidine Phosphotransfer domain TK34_04555 SM00091 PAS domain TK34_04555 SM00387 Histidine kinase-like ATPases TK34_04555 SM00388 His Kinase A (phosphoacceptor) domain TK34_04555 SM00448 cheY-homologous receiver domain TK34_04560 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TK34_04570 SM00062 Bacterial periplasmic substrate-binding proteins TK34_04570 SM00073 Histidine Phosphotransfer domain TK34_04570 SM00091 PAS domain TK34_04570 SM00387 Histidine kinase-like ATPases TK34_04570 SM00388 His Kinase A (phosphoacceptor) domain TK34_04570 SM00448 cheY-homologous receiver domain TK34_04575 SM00052 Putative diguanylate phosphodiesterase TK34_04575 SM00448 cheY-homologous receiver domain TK34_04580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_04580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_04595 SM00052 Putative diguanylate phosphodiesterase TK34_04595 SM00448 cheY-homologous receiver domain TK34_04600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_04600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_04605 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. TK34_04620 SM00382 ATPases associated with a variety of cellular activities TK34_04620 SM00930 TK34_04620 TK34_04655 SM00257 Lysin motif TK34_04655 SM00646 TK34_04655 TK34_04660 SM00853 MutL C terminal dimerisation domain TK34_04660 SM01340 TK34_04660 TK34_04680 SM00244 prohibitin homologues TK34_04685 SM00244 prohibitin homologues TK34_04735 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TK34_04745 SM00530 Helix-turn-helix XRE-family like proteins TK34_04760 SM00650 Ribosomal RNA adenine dimethylases TK34_04790 SM00271 DnaJ molecular chaperone homology domain TK34_04805 SM00382 ATPases associated with a variety of cellular activities TK34_04855 SM01133 TK34_04855 TK34_04875 SM00382 ATPases associated with a variety of cellular activities TK34_04925 SM00530 Helix-turn-helix XRE-family like proteins TK34_04935 SM00387 Histidine kinase-like ATPases TK34_04935 SM00388 His Kinase A (phosphoacceptor) domain TK34_04935 SM00448 cheY-homologous receiver domain TK34_04940 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins TK34_04940 SM00495 Chitin-binding domain type 3 TK34_04940 SM00636 TK34_04940 TK34_04950 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins TK34_04950 SM00495 Chitin-binding domain type 3 TK34_04960 SM00100 Cyclic nucleotide-monophosphate binding domain TK34_04960 SM00419 helix_turn_helix, cAMP Regulatory protein TK34_05020 SM00984 UDP binding domain TK34_05030 SM00267 diguanylate cyclase TK34_05040 SM00260 Two component signalling adaptor domain TK34_05040 SM00448 cheY-homologous receiver domain TK34_05065 SM00320 WD40 repeats TK34_05075 SM00382 ATPases associated with a variety of cellular activities TK34_05075 SM00448 cheY-homologous receiver domain TK34_05100 SM00052 Putative diguanylate phosphodiesterase TK34_05105 SM00978 TK34_05105 TK34_05110 SM00382 ATPases associated with a variety of cellular activities TK34_05115 SM01005 Alanine racemase, C-terminal domain TK34_05130 SM00052 Putative diguanylate phosphodiesterase TK34_05165 SM00448 cheY-homologous receiver domain TK34_05175 SM00138 Methyltransferase, chemotaxis proteins TK34_05180 SM00091 PAS domain TK34_05180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_05180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_05185 SM00260 Two component signalling adaptor domain TK34_05190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_05190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_05195 SM00073 Histidine Phosphotransfer domain TK34_05195 SM00260 Two component signalling adaptor domain TK34_05195 SM00387 Histidine kinase-like ATPases TK34_05195 SM01231 TK34_05195 TK34_05205 SM00448 cheY-homologous receiver domain TK34_05210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_05245 SM00342 helix_turn_helix, arabinose operon control protein TK34_05245 SM00478 endonuclease III TK34_05245 SM01009 AlkA N-terminal domain TK34_05260 SM00463 Small MutS-related domain TK34_05295 SM01007 Class II Aldolase and Adducin N-terminal domain TK34_05305 SM00342 helix_turn_helix, arabinose operon control protein TK34_05350 SM00487 DEAD-like helicases superfamily TK34_05350 SM00490 helicase superfamily c-terminal domain TK34_05365 SM00528 Domain in histone-like proteins of HNS family TK34_05385 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TK34_05385 SM00267 diguanylate cyclase TK34_05440 SM00830 Chorismate mutase type II TK34_05475 SM00422 helix_turn_helix, mercury resistance TK34_05565 SM00912 haemagglutination activity domain TK34_05580 SM00421 helix_turn_helix, Lux Regulon TK34_05690 SM00900 TK34_05690 TK34_05730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_05730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_05760 SM01329 TK34_05760 TK34_05765 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs TK34_05765 SM00475 5'-3' exonuclease TK34_05775 SM00267 diguanylate cyclase TK34_05780 SM00028 Tetratricopeptide repeats TK34_05860 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TK34_05905 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TK34_05915 SM00935 Outer membrane protein (OmpH-like) TK34_05945 SM00481 DNA polymerase alpha chain like domain TK34_05955 SM00862 Transcriptional regulatory protein, C terminal TK34_05990 SM01126 TK34_05990 TK34_05995 SM00849 Metallo-beta-lactamase superfamily TK34_06015 SM00382 ATPases associated with a variety of cellular activities TK34_06030 SM00977 TilS substrate C-terminal domain TK34_06035 SM00267 diguanylate cyclase TK34_06060 SM00421 helix_turn_helix, Lux Regulon TK34_06060 SM00448 cheY-homologous receiver domain TK34_06070 SM00642 Alpha-amylase domain TK34_06095 SM00062 Bacterial periplasmic substrate-binding proteins TK34_06130 SM00771 ZipA, C-terminal domain (FtsZ-binding) TK34_06135 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TK34_06135 SM00292 breast cancer carboxy-terminal domain TK34_06135 SM00532 Ligase N family TK34_06170 SM00062 Bacterial periplasmic substrate-binding proteins TK34_06185 SM00347 helix_turn_helix multiple antibiotic resistance protein TK34_06195 SM00919 Malic enzyme, NAD binding domain TK34_06195 SM01274 TK34_06195 TK34_06200 SM00387 Histidine kinase-like ATPases TK34_06205 SM00448 cheY-homologous receiver domain TK34_06215 SM00342 helix_turn_helix, arabinose operon control protein TK34_06225 SM00382 ATPases associated with a variety of cellular activities TK34_06245 SM00448 cheY-homologous receiver domain TK34_06245 SM00862 Transcriptional regulatory protein, C terminal TK34_06250 SM00387 Histidine kinase-like ATPases TK34_06250 SM00388 His Kinase A (phosphoacceptor) domain TK34_06285 SM00382 ATPases associated with a variety of cellular activities TK34_06300 SM00062 Bacterial periplasmic substrate-binding proteins TK34_06315 SM00382 ATPases associated with a variety of cellular activities TK34_06365 SM00267 diguanylate cyclase TK34_06380 SM00342 helix_turn_helix, arabinose operon control protein TK34_06385 SM00919 Malic enzyme, NAD binding domain TK34_06385 SM01274 TK34_06385 TK34_06410 SM00530 Helix-turn-helix XRE-family like proteins TK34_06425 SM00267 diguanylate cyclase TK34_06445 SM00729 Elongator protein 3, MiaB family, Radical SAM TK34_06500 SM00642 Alpha-amylase domain TK34_06525 SM00155 Phospholipase D. Active site motifs. TK34_06570 SM01126 TK34_06570 TK34_06645 SM00481 DNA polymerase alpha chain like domain TK34_06720 SM00267 diguanylate cyclase TK34_06745 SM00382 ATPases associated with a variety of cellular activities TK34_06780 SM00382 ATPases associated with a variety of cellular activities TK34_06785 SM00382 ATPases associated with a variety of cellular activities TK34_06800 SM00448 cheY-homologous receiver domain TK34_06800 SM00862 Transcriptional regulatory protein, C terminal TK34_06850 SM00487 DEAD-like helicases superfamily TK34_06945 SM00382 ATPases associated with a variety of cellular activities TK34_06980 SM00062 Bacterial periplasmic substrate-binding proteins TK34_06980 SM00387 Histidine kinase-like ATPases TK34_06980 SM00388 His Kinase A (phosphoacceptor) domain TK34_06980 SM00448 cheY-homologous receiver domain TK34_06980 SM00918 Ligated ion channel L-glutamate- and glycine-binding site TK34_07015 SM01126 TK34_07015 TK34_07035 SM00530 Helix-turn-helix XRE-family like proteins TK34_07055 SM00528 Domain in histone-like proteins of HNS family TK34_07075 SM00382 ATPases associated with a variety of cellular activities TK34_07090 SM01131 TK34_07090 TK34_07115 SM00271 DnaJ molecular chaperone homology domain TK34_07135 SM00640 Glycosyl hydrolases family 32 TK34_07140 SM00354 helix_turn _helix lactose operon repressor TK34_07160 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TK34_07185 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TK34_07185 SM00091 PAS domain TK34_07185 SM00267 diguanylate cyclase TK34_07245 SM00028 Tetratricopeptide repeats TK34_07245 SM00448 cheY-homologous receiver domain TK34_07355 SM00247 Beta/gamma crystallins TK34_07405 SM00481 DNA polymerase alpha chain like domain TK34_07425 SM00363 S4 RNA-binding domain TK34_07465 SM00984 UDP binding domain TK34_07545 SM00487 DEAD-like helicases superfamily TK34_07545 SM00490 helicase superfamily c-terminal domain TK34_07570 SM00861 Transketolase, pyrimidine binding domain TK34_07580 SM00357 Cold shock protein domain TK34_07615 SM00420 helix_turn_helix, Deoxyribose operon repressor TK34_07615 SM01134 TK34_07615 TK34_07640 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TK34_07645 SM00363 S4 RNA-binding domain TK34_07675 SM00858 TK34_07675 TK34_07680 SM00260 Two component signalling adaptor domain TK34_07680 SM00448 cheY-homologous receiver domain TK34_07685 SM00138 Methyltransferase, chemotaxis proteins TK34_07710 SM01126 TK34_07710 TK34_07715 SM01126 TK34_07715 TK34_07740 SM00047 Lysozyme subfamily 2 TK34_07755 SM00116 Domain in cystathionine beta-synthase and other proteins. TK34_07755 SM00924 MgtE intracellular N domain TK34_07760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TK34_07780 SM00073 Histidine Phosphotransfer domain TK34_07790 SM00897 FIST N domain TK34_07790 SM01204 TK34_07790 TK34_07795 SM00387 Histidine kinase-like ATPases TK34_07795 SM00388 His Kinase A (phosphoacceptor) domain TK34_07795 SM00448 cheY-homologous receiver domain TK34_07800 SM00464 Found in ATP-dependent protease La (LON) TK34_07805 SM00421 helix_turn_helix, Lux Regulon TK34_07805 SM00448 cheY-homologous receiver domain TK34_07810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_07810 SM00387 Histidine kinase-like ATPases TK34_07815 SM00729 Elongator protein 3, MiaB family, Radical SAM TK34_07830 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TK34_07855 SM00852 Probable molybdopterin binding domain TK34_07885 SM00382 ATPases associated with a variety of cellular activities TK34_07930 SM00849 Metallo-beta-lactamase superfamily TK34_07935 SM00382 ATPases associated with a variety of cellular activities TK34_07955 SM00421 helix_turn_helix, Lux Regulon TK34_07955 SM00448 cheY-homologous receiver domain TK34_07960 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TK34_07960 SM00465 GIY-YIG type nucleases (URI domain) TK34_07990 SM00530 Helix-turn-helix XRE-family like proteins TK34_08050 SM00840 TK34_08050 TK34_08070 SM00267 diguanylate cyclase TK34_08075 SM00062 Bacterial periplasmic substrate-binding proteins TK34_08080 SM00062 Bacterial periplasmic substrate-binding proteins TK34_08110 SM00899 TK34_08110 TK34_08135 SM00382 ATPases associated with a variety of cellular activities TK34_08145 SM00062 Bacterial periplasmic substrate-binding proteins TK34_08155 SM00382 ATPases associated with a variety of cellular activities TK34_08200 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain TK34_08205 SM00851 MGS-like domain TK34_08205 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TK34_08210 SM00917 LeuA allosteric (dimerisation) domain TK34_08230 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TK34_08245 SM00487 DEAD-like helicases superfamily TK34_08245 SM00490 helicase superfamily c-terminal domain TK34_08255 SM01351 TK34_08255 TK34_08270 SM00422 helix_turn_helix, mercury resistance TK34_08285 SM00062 Bacterial periplasmic substrate-binding proteins TK34_08295 SM00382 ATPases associated with a variety of cellular activities TK34_08310 SM00729 Elongator protein 3, MiaB family, Radical SAM TK34_08320 SM01126 TK34_08320 TK34_08350 SM00052 Putative diguanylate phosphodiesterase TK34_08350 SM00267 diguanylate cyclase TK34_08360 SM00327 von Willebrand factor (vWF) type A domain TK34_08395 SM00342 helix_turn_helix, arabinose operon control protein TK34_08400 SM01217 TK34_08400 TK34_08445 SM00014 Acid phosphatase homologues TK34_08455 SM00859 Semialdehyde dehydrogenase, NAD binding domain TK34_08545 SM00382 ATPases associated with a variety of cellular activities TK34_08620 SM00342 helix_turn_helix, arabinose operon control protein TK34_08715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_08720 SM00267 diguanylate cyclase TK34_08795 SM00116 Domain in cystathionine beta-synthase and other proteins. TK34_08795 SM01091 Transporter associated domain TK34_08820 SM00487 DEAD-like helicases superfamily TK34_08820 SM00490 helicase superfamily c-terminal domain TK34_08830 SM00479 TK34_08830 TK34_08835 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_08850 SM00478 endonuclease III TK34_08850 SM00525 TK34_08850 TK34_08860 SM00900 TK34_08860 TK34_08895 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TK34_08895 SM00091 PAS domain TK34_08895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_08930 SM00487 DEAD-like helicases superfamily TK34_08930 SM00490 helicase superfamily c-terminal domain TK34_08950 SM00448 cheY-homologous receiver domain TK34_08950 SM00850 LytTr DNA-binding domain TK34_08955 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TK34_08960 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TK34_08995 SM00382 ATPases associated with a variety of cellular activities TK34_09000 SM00382 ATPases associated with a variety of cellular activities TK34_09010 SM01005 Alanine racemase, C-terminal domain TK34_09045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_09045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_09270 SM00382 ATPases associated with a variety of cellular activities TK34_09330 SM00482 DNA polymerase A domain TK34_09410 SM00530 Helix-turn-helix XRE-family like proteins TK34_09415 SM00873 B3/4 domain TK34_09420 SM01005 Alanine racemase, C-terminal domain TK34_09425 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_09425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_09430 SM00052 Putative diguanylate phosphodiesterase TK34_09430 SM00448 cheY-homologous receiver domain TK34_09435 SM00448 cheY-homologous receiver domain TK34_09440 SM00138 Methyltransferase, chemotaxis proteins TK34_09445 SM00260 Two component signalling adaptor domain TK34_09450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_09455 SM00073 Histidine Phosphotransfer domain TK34_09455 SM00260 Two component signalling adaptor domain TK34_09455 SM00387 Histidine kinase-like ATPases TK34_09455 SM01231 TK34_09455 TK34_09465 SM00448 cheY-homologous receiver domain TK34_09515 SM00382 ATPases associated with a variety of cellular activities TK34_09520 SM00382 ATPases associated with a variety of cellular activities TK34_09625 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TK34_09640 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TK34_09640 SM00382 ATPases associated with a variety of cellular activities TK34_09650 SM00493 TK34_09650 TK34_09655 SM00387 Histidine kinase-like ATPases TK34_09690 SM00052 Putative diguanylate phosphodiesterase TK34_09690 SM00267 diguanylate cyclase TK34_09725 SM00823 Phosphopantetheine attachment site TK34_09730 SM00822 TK34_09730 TK34_09735 SM00823 Phosphopantetheine attachment site TK34_09755 SM00382 ATPases associated with a variety of cellular activities TK34_09800 SM00893 Electron transfer flavoprotein domain TK34_09805 SM00893 Electron transfer flavoprotein domain TK34_09825 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_09825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_09830 SM00729 Elongator protein 3, MiaB family, Radical SAM TK34_09865 SM00116 Domain in cystathionine beta-synthase and other proteins. TK34_09865 SM01240 TK34_09865 TK34_09880 SM00342 helix_turn_helix, arabinose operon control protein TK34_09905 SM00855 Phosphoglycerate mutase family TK34_09940 SM00487 DEAD-like helicases superfamily TK34_09940 SM00490 helicase superfamily c-terminal domain TK34_09940 SM00982 TK34_09940 TK34_09940 SM01058 CarD-like/TRCF domain TK34_09955 SM00382 ATPases associated with a variety of cellular activities TK34_09965 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TK34_09985 SM00382 ATPases associated with a variety of cellular activities TK34_09985 SM00994 ClpX C4-type zinc finger TK34_09985 SM01086 C-terminal, D2-small domain, of ClpB protein TK34_09990 SM00382 ATPases associated with a variety of cellular activities TK34_09990 SM00464 Found in ATP-dependent protease La (LON) TK34_10005 SM00382 ATPases associated with a variety of cellular activities TK34_10020 SM00479 TK34_10020 TK34_10025 SM00100 Cyclic nucleotide-monophosphate binding domain TK34_10025 SM00116 Domain in cystathionine beta-synthase and other proteins. TK34_10040 SM01126 TK34_10040 TK34_10085 SM00062 Bacterial periplasmic substrate-binding proteins TK34_10090 SM00422 helix_turn_helix, mercury resistance TK34_10100 SM00878 Biotin carboxylase C-terminal domain TK34_10100 SM01209 TK34_10100 TK34_10145 SM00822 TK34_10145 TK34_10160 SM00267 diguanylate cyclase TK34_10175 SM00052 Putative diguanylate phosphodiesterase TK34_10175 SM00267 diguanylate cyclase TK34_10185 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TK34_10190 SM00822 TK34_10190 TK34_10200 SM00518 AP endonuclease family 2 TK34_10230 SM00090 RIO-like kinase TK34_10240 SM00267 diguanylate cyclase TK34_10250 SM00486 DNA polymerase type-B family TK34_10335 SM00347 helix_turn_helix multiple antibiotic resistance protein TK34_10415 SM00422 helix_turn_helix, mercury resistance TK34_10425 SM00052 Putative diguanylate phosphodiesterase TK34_10465 SM00028 Tetratricopeptide repeats TK34_10470 SM00327 von Willebrand factor (vWF) type A domain TK34_10500 SM01322 TK34_10500 TK34_10510 SM00382 ATPases associated with a variety of cellular activities TK34_10570 SM01092 CO dehydrogenase flavoprotein C-terminal domain TK34_10575 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TK34_10595 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TK34_10600 SM01092 CO dehydrogenase flavoprotein C-terminal domain TK34_10610 SM00237 Domains in Na-Ca exchangers and integrin-beta4 TK34_10655 SM00073 Histidine Phosphotransfer domain TK34_10655 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TK34_10655 SM00091 PAS domain TK34_10655 SM00387 Histidine kinase-like ATPases TK34_10655 SM00388 His Kinase A (phosphoacceptor) domain TK34_10655 SM00448 cheY-homologous receiver domain TK34_10660 SM00091 PAS domain TK34_10665 SM00448 cheY-homologous receiver domain TK34_10665 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TK34_10705 SM00491 TK34_10705 TK34_10730 SM00341 Helicase and RNase D C-terminal TK34_10730 SM00474 3'-5' exonuclease TK34_10735 SM00062 Bacterial periplasmic substrate-binding proteins TK34_10760 SM00382 ATPases associated with a variety of cellular activities TK34_10780 SM00421 helix_turn_helix, Lux Regulon TK34_10785 SM00116 Domain in cystathionine beta-synthase and other proteins. TK34_10790 SM00382 ATPases associated with a variety of cellular activities TK34_10790 SM00487 DEAD-like helicases superfamily TK34_10805 SM00857 Resolvase, N terminal domain TK34_10830 SM00387 Histidine kinase-like ATPases TK34_10830 SM00388 His Kinase A (phosphoacceptor) domain TK34_10830 SM00448 cheY-homologous receiver domain TK34_10835 SM00448 cheY-homologous receiver domain TK34_10835 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TK34_10840 SM00849 Metallo-beta-lactamase superfamily TK34_10845 SM00450 Rhodanese Homology Domain TK34_10865 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase TK34_10870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_10910 SM00316 Ribosomal protein S1-like RNA-binding domain TK34_10915 SM00363 S4 RNA-binding domain TK34_10965 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. TK34_10970 SM00822 TK34_10970 TK34_10980 SM00825 Beta-ketoacyl synthase TK34_11000 SM00382 ATPases associated with a variety of cellular activities TK34_11090 SM00822 TK34_11090 TK34_11160 SM00530 Helix-turn-helix XRE-family like proteins TK34_11180 SM00382 ATPases associated with a variety of cellular activities TK34_11190 SM00981 TK34_11190 TK34_11220 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TK34_11220 SM00245 tail specific protease TK34_11225 SM00945 ProQ/FINO family TK34_11280 SM00100 Cyclic nucleotide-monophosphate binding domain TK34_11280 SM00419 helix_turn_helix, cAMP Regulatory protein TK34_11315 SM00382 ATPases associated with a variety of cellular activities TK34_11335 SM00354 helix_turn _helix lactose operon repressor TK34_11340 SM00267 diguanylate cyclase TK34_11365 SM00062 Bacterial periplasmic substrate-binding proteins TK34_11365 SM00387 Histidine kinase-like ATPases TK34_11365 SM00388 His Kinase A (phosphoacceptor) domain TK34_11365 SM00448 cheY-homologous receiver domain TK34_11370 SM00411 bacterial (prokaryotic) histone like domain TK34_11375 SM00873 B3/4 domain TK34_11375 SM00874 tRNA synthetase B5 domain TK34_11375 SM00896 Ferredoxin-fold anticodon binding domain TK34_11400 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TK34_11405 SM00671 Sel1-like repeats. TK34_11410 SM00729 Elongator protein 3, MiaB family, Radical SAM TK34_11415 SM00434 DNA Topoisomerase IV TK34_11445 SM00925 MltA specific insert domain TK34_11485 SM00354 helix_turn _helix lactose operon repressor TK34_11510 SM00354 helix_turn _helix lactose operon repressor TK34_11525 SM00953 TK34_11525 TK34_11530 SM00487 DEAD-like helicases superfamily TK34_11530 SM00490 helicase superfamily c-terminal domain TK34_11535 SM00062 Bacterial periplasmic substrate-binding proteins TK34_11550 SM00463 Small MutS-related domain TK34_11555 SM01126 TK34_11555 TK34_11570 SM00091 PAS domain TK34_11570 SM00267 diguanylate cyclase TK34_11575 SM00855 Phosphoglycerate mutase family TK34_11600 SM00782 PhnA Zinc-Ribbon TK34_11750 SM00642 Alpha-amylase domain TK34_11765 SM00342 helix_turn_helix, arabinose operon control protein TK34_11785 SM01144 TK34_11785 TK34_11800 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. TK34_11810 SM00487 DEAD-like helicases superfamily TK34_11810 SM00490 helicase superfamily c-terminal domain TK34_11835 SM01118 TK34_11835 TK34_11900 SM00382 ATPases associated with a variety of cellular activities TK34_11905 SM00382 ATPases associated with a variety of cellular activities TK34_11910 SM00387 Histidine kinase-like ATPases TK34_11910 SM00388 His Kinase A (phosphoacceptor) domain TK34_11910 SM00448 cheY-homologous receiver domain TK34_11925 SM01126 TK34_11925 TK34_11970 SM00487 DEAD-like helicases superfamily TK34_11970 SM00490 helicase superfamily c-terminal domain TK34_11975 SM00763 PrkA AAA domain TK34_11990 SM00345 helix_turn_helix gluconate operon transcriptional repressor TK34_12015 SM00487 DEAD-like helicases superfamily TK34_12015 SM00490 helicase superfamily c-terminal domain TK34_12030 SM00062 Bacterial periplasmic substrate-binding proteins TK34_12050 SM00448 cheY-homologous receiver domain TK34_12055 SM00091 PAS domain TK34_12055 SM00387 Histidine kinase-like ATPases TK34_12065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_12065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_12065 SM01049 TK34_12065 TK34_12170 SM00116 Domain in cystathionine beta-synthase and other proteins. TK34_12180 SM00062 Bacterial periplasmic substrate-binding proteins TK34_12205 SM00342 helix_turn_helix, arabinose operon control protein TK34_12205 SM00871 Bacterial transcription activator, effector binding domain TK34_12210 SM00822 TK34_12210 TK34_12240 SM00859 Semialdehyde dehydrogenase, NAD binding domain TK34_12280 SM00345 helix_turn_helix gluconate operon transcriptional repressor TK34_12280 SM00866 TK34_12280 TK34_12290 SM00382 ATPases associated with a variety of cellular activities TK34_12315 SM00881 CoA binding domain TK34_12330 SM00861 Transketolase, pyrimidine binding domain TK34_12370 SM01126 TK34_12370 TK34_12375 SM00825 Beta-ketoacyl synthase TK34_12440 SM00342 helix_turn_helix, arabinose operon control protein TK34_12450 SM00382 ATPases associated with a variety of cellular activities TK34_12465 SM01007 Class II Aldolase and Adducin N-terminal domain TK34_12475 SM00479 TK34_12475 TK34_12530 SM00267 diguanylate cyclase TK34_12530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_12540 SM00091 PAS domain TK34_12540 SM00382 ATPases associated with a variety of cellular activities TK34_12585 SM00382 ATPases associated with a variety of cellular activities TK34_12605 SM00382 ATPases associated with a variety of cellular activities TK34_12610 SM00382 ATPases associated with a variety of cellular activities TK34_12635 SM00382 ATPases associated with a variety of cellular activities TK34_12645 SM00843 TK34_12645 TK34_12650 SM00344 helix_turn_helix ASNC type TK34_12660 SM00267 diguanylate cyclase TK34_12660 SM00448 cheY-homologous receiver domain TK34_12680 SM00316 Ribosomal protein S1-like RNA-binding domain TK34_12685 SM00382 ATPases associated with a variety of cellular activities TK34_12685 SM01086 C-terminal, D2-small domain, of ClpB protein TK34_12695 SM00357 Cold shock protein domain TK34_12765 SM00382 ATPases associated with a variety of cellular activities TK34_12770 SM00382 ATPases associated with a variety of cellular activities TK34_12770 SM01086 C-terminal, D2-small domain, of ClpB protein TK34_12820 SM00671 Sel1-like repeats. TK34_12860 SM01154 TK34_12860 TK34_12875 SM00528 Domain in histone-like proteins of HNS family TK34_12900 SM01144 TK34_12900 TK34_12910 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family TK34_12915 SM00028 Tetratricopeptide repeats TK34_12925 SM00411 bacterial (prokaryotic) histone like domain TK34_12930 SM00316 Ribosomal protein S1-like RNA-binding domain TK34_12975 SM00052 Putative diguanylate phosphodiesterase TK34_12975 SM00267 diguanylate cyclase TK34_12990 SM00448 cheY-homologous receiver domain TK34_12995 SM00091 PAS domain TK34_13020 SM00360 RNA recognition motif TK34_13085 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TK34_13090 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TK34_13090 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TK34_13130 SM00897 FIST N domain TK34_13130 SM01204 TK34_13130 TK34_13135 SM00091 PAS domain TK34_13135 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TK34_13140 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TK34_13145 SM01211 TK34_13145 TK34_13150 SM00062 Bacterial periplasmic substrate-binding proteins TK34_13165 SM00564 beta-propeller repeat TK34_13185 SM00530 Helix-turn-helix XRE-family like proteins TK34_13190 SM00028 Tetratricopeptide repeats TK34_13200 SM00562 TK34_13200 TK34_13225 SM00271 DnaJ molecular chaperone homology domain TK34_13275 SM00028 Tetratricopeptide repeats TK34_13280 SM00450 Rhodanese Homology Domain TK34_13295 SM01323 TK34_13295 TK34_13310 SM00116 Domain in cystathionine beta-synthase and other proteins. TK34_13350 SM00382 ATPases associated with a variety of cellular activities TK34_13360 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TK34_13365 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TK34_13410 SM00382 ATPases associated with a variety of cellular activities TK34_13490 SM01126 TK34_13490 TK34_13495 SM01126 TK34_13495 TK34_13520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_13520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_13595 SM00981 TK34_13595 TK34_13610 SM01359 TK34_13610 TK34_13610 SM01360 TK34_13610 TK34_13615 SM00450 Rhodanese Homology Domain TK34_13620 SM00052 Putative diguanylate phosphodiesterase TK34_13620 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TK34_13620 SM00091 PAS domain TK34_13620 SM00267 diguanylate cyclase TK34_13635 SM01126 TK34_13635 TK34_13650 SM00062 Bacterial periplasmic substrate-binding proteins TK34_13650 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. TK34_13655 SM00382 ATPases associated with a variety of cellular activities TK34_13720 SM00382 ATPases associated with a variety of cellular activities TK34_13795 SM00830 Chorismate mutase type II TK34_13815 SM00420 helix_turn_helix, Deoxyribose operon repressor TK34_13815 SM01134 TK34_13815 TK34_13880 SM00345 helix_turn_helix gluconate operon transcriptional repressor TK34_13905 SM00871 Bacterial transcription activator, effector binding domain TK34_13930 SM00363 S4 RNA-binding domain TK34_13935 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TK34_13955 SM00507 HNH nucleases TK34_13960 SM00855 Phosphoglycerate mutase family TK34_13985 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_13985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_14015 SM00563 Phosphate acyltransferases TK34_14025 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TK34_14035 SM00867 YceI-like domain TK34_14055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_14055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_14065 SM00852 Probable molybdopterin binding domain TK34_14090 SM00491 TK34_14090 TK34_14115 SM00098 Alkaline phosphatase homologues TK34_14120 SM00098 Alkaline phosphatase homologues TK34_14145 SM00421 helix_turn_helix, Lux Regulon TK34_14145 SM00448 cheY-homologous receiver domain TK34_14150 SM00387 Histidine kinase-like ATPases TK34_14160 SM00267 diguanylate cyclase TK34_14165 SM00062 Bacterial periplasmic substrate-binding proteins TK34_14165 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. TK34_14175 SM00382 ATPases associated with a variety of cellular activities TK34_14210 SM01091 Transporter associated domain TK34_14220 SM00382 ATPases associated with a variety of cellular activities TK34_14285 SM00382 ATPases associated with a variety of cellular activities TK34_14285 SM00448 cheY-homologous receiver domain TK34_14290 SM00091 PAS domain TK34_14290 SM00387 Histidine kinase-like ATPases TK34_14290 SM00388 His Kinase A (phosphoacceptor) domain TK34_14295 SM00382 ATPases associated with a variety of cellular activities TK34_14325 SM00479 TK34_14325 TK34_14340 SM00849 Metallo-beta-lactamase superfamily TK34_14345 SM00257 Lysin motif TK34_14370 SM00354 helix_turn _helix lactose operon repressor TK34_14380 SM00052 Putative diguanylate phosphodiesterase TK34_14380 SM00267 diguanylate cyclase TK34_14455 SM00382 ATPases associated with a variety of cellular activities TK34_14480 SM00347 helix_turn_helix multiple antibiotic resistance protein TK34_14535 SM01126 TK34_14535 TK34_14545 SM01081 Putative carbohydrate binding domain TK34_14625 SM00458 Ricin-type beta-trefoil TK34_14700 SM00342 helix_turn_helix, arabinose operon control protein TK34_14710 SM00890 Domain of unknown function TK34_14725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_14750 SM00729 Elongator protein 3, MiaB family, Radical SAM TK34_14750 SM00876 Biotin and Thiamin Synthesis associated domain TK34_14760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_14820 SM01091 Transporter associated domain TK34_14845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_14845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_14920 SM00382 ATPases associated with a variety of cellular activities TK34_14940 SM00858 TK34_14940 TK34_14970 SM00859 Semialdehyde dehydrogenase, NAD binding domain TK34_14990 SM00507 HNH nucleases TK34_15000 SM00487 DEAD-like helicases superfamily TK34_15000 SM00490 helicase superfamily c-terminal domain TK34_15025 SM01329 TK34_15025 TK34_15030 SM00342 helix_turn_helix, arabinose operon control protein TK34_15040 SM01126 TK34_15040 TK34_15070 SM00354 helix_turn _helix lactose operon repressor TK34_15145 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. TK34_15245 SM00382 ATPases associated with a variety of cellular activities TK34_15255 SM00260 Two component signalling adaptor domain TK34_15260 SM00260 Two component signalling adaptor domain TK34_15280 SM00448 cheY-homologous receiver domain TK34_15295 SM00448 cheY-homologous receiver domain TK34_15310 SM00382 ATPases associated with a variety of cellular activities TK34_15310 SM00962 SRP54-type protein, GTPase domain TK34_15370 SM00382 ATPases associated with a variety of cellular activities TK34_15400 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TK34_15405 SM00729 Elongator protein 3, MiaB family, Radical SAM TK34_15410 SM00448 cheY-homologous receiver domain TK34_15410 SM00862 Transcriptional regulatory protein, C terminal TK34_15415 SM00387 Histidine kinase-like ATPases TK34_15455 SM01126 TK34_15455 TK34_15485 SM00919 Malic enzyme, NAD binding domain TK34_15485 SM01274 TK34_15485 TK34_15490 SM00387 Histidine kinase-like ATPases TK34_15490 SM00448 cheY-homologous receiver domain TK34_15505 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TK34_15545 SM00387 Histidine kinase-like ATPases TK34_15545 SM00388 His Kinase A (phosphoacceptor) domain TK34_15550 SM00382 ATPases associated with a variety of cellular activities TK34_15550 SM00448 cheY-homologous receiver domain TK34_15565 SM00382 ATPases associated with a variety of cellular activities TK34_15575 SM00852 Probable molybdopterin binding domain TK34_15590 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TK34_15590 SM00091 PAS domain TK34_15590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_15640 SM00091 PAS domain TK34_15640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_15640 SM00387 Histidine kinase-like ATPases TK34_15640 SM00388 His Kinase A (phosphoacceptor) domain TK34_15640 SM00448 cheY-homologous receiver domain TK34_15660 SM00382 ATPases associated with a variety of cellular activities TK34_15665 SM00382 ATPases associated with a variety of cellular activities TK34_15685 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_15695 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain TK34_15695 SM00437 Bacterial DNA topoisomerase I DNA-binding domain TK34_15695 SM00493 TK34_15695 TK34_15740 SM00788 Adenylosuccinate synthetase TK34_15750 SM00342 helix_turn_helix, arabinose operon control protein TK34_15760 SM00363 S4 RNA-binding domain TK34_15790 SM00861 Transketolase, pyrimidine binding domain TK34_15800 SM00731 SprT homologues. TK34_15820 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_15830 SM00732 Likely ribonuclease with RNase H fold. TK34_15855 SM00460 Transglutaminase/protease-like homologues TK34_15915 SM00937 TK34_15915 TK34_15940 SM01400 TK34_15940 TK34_16015 SM00100 Cyclic nucleotide-monophosphate binding domain TK34_16020 SM01022 TK34_16020 TK34_16030 SM00642 Alpha-amylase domain TK34_16040 SM00890 Domain of unknown function TK34_16055 SM01150 TK34_16055 TK34_16150 SM00842 Cell division protein FtsA TK34_16165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_16165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_16175 SM00849 Metallo-beta-lactamase superfamily TK34_16215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_16215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_16275 SM01236 TK34_16275 TK34_16280 SM00822 TK34_16280 TK34_16290 SM00448 cheY-homologous receiver domain TK34_16290 SM00862 Transcriptional regulatory protein, C terminal TK34_16295 SM00387 Histidine kinase-like ATPases TK34_16295 SM00388 His Kinase A (phosphoacceptor) domain TK34_16315 SM01240 TK34_16315 TK34_16325 SM00841 Elongation factor P, C-terminal TK34_16325 SM01185 TK34_16325 TK34_16350 SM00267 diguanylate cyclase TK34_16375 SM00267 diguanylate cyclase TK34_16380 SM00357 Cold shock protein domain TK34_16395 SM00729 Elongator protein 3, MiaB family, Radical SAM TK34_16410 SM00116 Domain in cystathionine beta-synthase and other proteins. TK34_16410 SM01091 Transporter associated domain TK34_16490 SM00729 Elongator protein 3, MiaB family, Radical SAM TK34_16520 SM00422 helix_turn_helix, mercury resistance TK34_16605 SM00857 Resolvase, N terminal domain TK34_16645 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TK34_16665 SM00421 helix_turn_helix, Lux Regulon TK34_16665 SM00448 cheY-homologous receiver domain TK34_16675 SM00448 cheY-homologous receiver domain TK34_16675 SM00850 LytTr DNA-binding domain TK34_16705 SM00267 diguanylate cyclase TK34_16715 SM00316 Ribosomal protein S1-like RNA-binding domain TK34_16715 SM00322 K homology RNA-binding domain TK34_16720 SM01387 TK34_16720 TK34_16740 SM00316 Ribosomal protein S1-like RNA-binding domain TK34_16780 SM00382 ATPases associated with a variety of cellular activities TK34_16790 SM01103 TK34_16790 TK34_16825 SM00861 Transketolase, pyrimidine binding domain TK34_16845 SM00382 ATPases associated with a variety of cellular activities TK34_16870 SM00020 Trypsin-like serine protease TK34_16935 SM00052 Putative diguanylate phosphodiesterase TK34_16935 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TK34_16935 SM00091 PAS domain TK34_16935 SM00267 diguanylate cyclase TK34_16960 SM00878 Biotin carboxylase C-terminal domain TK34_16985 SM00829 Enoylreductase TK34_16995 SM01266 TK34_16995 TK34_17025 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TK34_17045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_17045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_17050 SM00937 TK34_17050 TK34_17090 SM00382 ATPases associated with a variety of cellular activities TK34_17115 SM00852 Probable molybdopterin binding domain TK34_17125 SM00825 Beta-ketoacyl synthase TK34_17130 SM00822 TK34_17130 TK34_17140 SM00825 Beta-ketoacyl synthase TK34_17200 SM00563 Phosphate acyltransferases TK34_17225 SM00477 DNA/RNA non-specific endonuclease TK34_17225 SM00892 DNA/RNA non-specific endonuclease TK34_17235 SM01057 Eukaryotic-type carbonic anhydrase TK34_17260 SM00382 ATPases associated with a variety of cellular activities TK34_17275 SM01012 TK34_17275 TK34_17285 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TK34_17315 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase TK34_17340 SM00382 ATPases associated with a variety of cellular activities TK34_17345 SM00382 ATPases associated with a variety of cellular activities TK34_17395 SM00028 Tetratricopeptide repeats TK34_17400 SM00495 Chitin-binding domain type 3 TK34_17400 SM00636 TK34_17400 TK34_17410 SM01126 TK34_17410 TK34_17450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_17450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_17460 SM00357 Cold shock protein domain TK34_17500 SM00479 TK34_17500 TK34_17530 SM01126 TK34_17530 TK34_17545 SM00342 helix_turn_helix, arabinose operon control protein TK34_17555 SM00052 Putative diguanylate phosphodiesterase TK34_17555 SM00091 PAS domain TK34_17555 SM00267 diguanylate cyclase TK34_17585 SM00382 ATPases associated with a variety of cellular activities TK34_17600 SM00450 Rhodanese Homology Domain TK34_17630 SM00052 Putative diguanylate phosphodiesterase TK34_17645 SM00382 ATPases associated with a variety of cellular activities TK34_17655 SM00260 Two component signalling adaptor domain TK34_17655 SM00448 cheY-homologous receiver domain TK34_17695 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TK34_17710 SM00448 cheY-homologous receiver domain TK34_17720 SM00382 ATPases associated with a variety of cellular activities TK34_17790 SM00487 DEAD-like helicases superfamily TK34_17790 SM00490 helicase superfamily c-terminal domain TK34_17800 SM01126 TK34_17800 TK34_17805 SM00052 Putative diguanylate phosphodiesterase TK34_17805 SM00267 diguanylate cyclase TK34_17820 SM00883 Chaperonin 10 Kd subunit TK34_17845 SM01126 TK34_17845 TK34_17900 SM00729 Elongator protein 3, MiaB family, Radical SAM TK34_17915 SM00422 helix_turn_helix, mercury resistance TK34_17920 SM00798 AICARFT/IMPCHase bienzyme TK34_17920 SM00851 MGS-like domain TK34_17925 SM01209 TK34_17925 TK34_17925 SM01210 TK34_17925 TK34_17940 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins TK34_17940 SM00632 TK34_17940 TK34_17940 SM00642 Alpha-amylase domain TK34_17980 SM00778 Zinc-binding domain of primase-helicase TK34_18005 SM00400 zinc finger TK34_18005 SM00493 TK34_18005 TK34_18005 SM00766 DNA primase DnaG DnaB-binding TK34_18025 SM00257 Lysin motif TK34_18065 SM01192 TK34_18065 TK34_18065 SM01193 TK34_18065 TK34_18080 SM00954 Region found in RelA / SpoT proteins TK34_18090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_18090 SM00387 Histidine kinase-like ATPases TK34_18090 SM00388 His Kinase A (phosphoacceptor) domain TK34_18090 SM00448 cheY-homologous receiver domain TK34_18100 SM00644 TK34_18100 TK34_18105 SM00420 helix_turn_helix, Deoxyribose operon repressor TK34_18105 SM01134 TK34_18105 TK34_18170 SM00358 Double-stranded RNA binding motif TK34_18170 SM00535 Ribonuclease III family TK34_18270 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TK34_18305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_18305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_18320 SM00822 TK34_18320 TK34_18360 SM00382 ATPases associated with a variety of cellular activities TK34_18365 SM00062 Bacterial periplasmic substrate-binding proteins TK34_18370 SM00382 ATPases associated with a variety of cellular activities TK34_18380 SM00448 cheY-homologous receiver domain TK34_18380 SM00862 Transcriptional regulatory protein, C terminal TK34_18385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_18385 SM00387 Histidine kinase-like ATPases TK34_18385 SM00388 His Kinase A (phosphoacceptor) domain TK34_18485 SM00487 DEAD-like helicases superfamily TK34_18485 SM00490 helicase superfamily c-terminal domain TK34_18495 SM00849 Metallo-beta-lactamase superfamily TK34_18535 SM00347 helix_turn_helix multiple antibiotic resistance protein TK34_18545 SM00347 helix_turn_helix multiple antibiotic resistance protein TK34_18560 SM00028 Tetratricopeptide repeats TK34_18560 SM00267 diguanylate cyclase TK34_18565 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TK34_18565 SM00091 PAS domain TK34_18565 SM00267 diguanylate cyclase TK34_18585 SM00382 ATPases associated with a variety of cellular activities TK34_18630 SM00829 Enoylreductase TK34_18700 SM00967 RNA 2'-O ribose methyltransferase substrate binding TK34_18705 SM00316 Ribosomal protein S1-like RNA-binding domain TK34_18705 SM00357 Cold shock protein domain TK34_18705 SM00955 TK34_18705 TK34_18710 SM00267 diguanylate cyclase TK34_18725 SM00938 Nitrogen regulatory protein P-II TK34_18810 SM00904 Riboflavin kinase TK34_18825 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TK34_18855 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TK34_18870 SM00927 DNA mismatch repair enzyme MutH TK34_18900 SM00382 ATPases associated with a variety of cellular activities TK34_18900 SM00962 SRP54-type protein, GTPase domain TK34_18900 SM00963 SRP54-type protein, helical bundle domain TK34_18910 SM01091 Transporter associated domain TK34_18925 SM00671 Sel1-like repeats. TK34_18950 SM00062 Bacterial periplasmic substrate-binding proteins TK34_18950 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. TK34_18955 SM00382 ATPases associated with a variety of cellular activities TK34_18970 SM00382 ATPases associated with a variety of cellular activities TK34_18985 SM00938 Nitrogen regulatory protein P-II TK34_19050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_19070 SM00487 DEAD-like helicases superfamily TK34_19070 SM00490 helicase superfamily c-terminal domain TK34_19150 SM00245 tail specific protease TK34_19180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TK34_19180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_19180 SM01049 TK34_19180 TK34_19195 SM00382 ATPases associated with a variety of cellular activities TK34_19225 SM01266 TK34_19225 TK34_19270 SM00859 Semialdehyde dehydrogenase, NAD binding domain TK34_19305 SM00342 helix_turn_helix, arabinose operon control protein TK34_19340 SM00421 helix_turn_helix, Lux Regulon TK34_19390 SM00382 ATPases associated with a variety of cellular activities TK34_19405 SM00363 S4 RNA-binding domain TK34_19420 SM00345 helix_turn_helix gluconate operon transcriptional repressor TK34_19420 SM00895 TK34_19420 TK34_19445 SM01126 TK34_19445 TK34_19460 SM00421 helix_turn_helix, Lux Regulon TK34_19475 SM00357 Cold shock protein domain TK34_19475 SM00955 TK34_19475 TK34_19510 SM00271 DnaJ molecular chaperone homology domain TK34_19545 SM00487 DEAD-like helicases superfamily TK34_19545 SM00490 helicase superfamily c-terminal domain TK34_19595 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TK34_19605 SM00862 Transcriptional regulatory protein, C terminal TK34_19745 SM00642 Alpha-amylase domain TK34_19765 SM00344 helix_turn_helix ASNC type TK34_19785 SM00852 Probable molybdopterin binding domain TK34_19795 SM00382 ATPases associated with a variety of cellular activities TK34_19825 SM00100 Cyclic nucleotide-monophosphate binding domain TK34_19860 SM01219 TK34_19860 TK34_19970 SM00267 diguanylate cyclase TK34_20000 SM00876 Biotin and Thiamin Synthesis associated domain TK34_20055 SM00448 cheY-homologous receiver domain TK34_20055 SM00862 Transcriptional regulatory protein, C terminal TK34_20060 SM00388 His Kinase A (phosphoacceptor) domain TK34_20075 SM01018 B12 binding domain TK34_20115 SM00342 helix_turn_helix, arabinose operon control protein TK34_20120 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TK34_20120 SM00091 PAS domain TK34_20130 SM00331 Sigma factor PP2C-like phosphatases TK34_20130 SM00387 Histidine kinase-like ATPases TK34_20135 SM00387 Histidine kinase-like ATPases TK34_20135 SM00388 His Kinase A (phosphoacceptor) domain TK34_20135 SM00448 cheY-homologous receiver domain TK34_20140 SM00448 cheY-homologous receiver domain TK34_20140 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TK34_20175 SM00886 Stress responsive A/B Barrel Domain TK34_20185 SM00316 Ribosomal protein S1-like RNA-binding domain TK34_20260 SM00382 ATPases associated with a variety of cellular activities TK34_20275 SM00965 Secretin and TonB N terminus short domain TK34_20305 SM00052 Putative diguanylate phosphodiesterase TK34_20305 SM00267 diguanylate cyclase TK34_20310 SM00052 Putative diguanylate phosphodiesterase TK34_20340 SM00345 helix_turn_helix gluconate operon transcriptional repressor TK34_20340 SM00866 TK34_20340 TK34_20345 SM00947 Carbonic anhydrase TK34_20360 SM00382 ATPases associated with a variety of cellular activities TK34_20365 SM00382 ATPases associated with a variety of cellular activities TK34_20365 SM00962 SRP54-type protein, GTPase domain TK34_20365 SM00963 SRP54-type protein, helical bundle domain TK34_20395 SM00155 Phospholipase D. Active site motifs. TK34_20400 SM00062 Bacterial periplasmic substrate-binding proteins TK34_20485 SM00822 TK34_20485 TK34_20550 SM00662 RNA polymerases D TK34_20555 SM00363 S4 RNA-binding domain TK34_20555 SM01390 TK34_20555 TK34_20615 SM01374 TK34_20615 TK34_20635 SM00322 K homology RNA-binding domain TK34_20650 SM01382 TK34_20650 TK34_20650 SM01383 TK34_20650 TK34_20670 SM01403 TK34_20670 TK34_20680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_20680 SM00387 Histidine kinase-like ATPases TK34_20680 SM00388 His Kinase A (phosphoacceptor) domain TK34_20685 SM00448 cheY-homologous receiver domain TK34_20685 SM00862 Transcriptional regulatory protein, C terminal TK34_20695 SM00316 Ribosomal protein S1-like RNA-binding domain TK34_20695 SM00732 Likely ribonuclease with RNase H fold. TK34_20740 SM00450 Rhodanese Homology Domain TK34_20760 SM00354 helix_turn _helix lactose operon repressor TK34_20785 SM00155 Phospholipase D. Active site motifs. TK34_20790 SM00487 DEAD-like helicases superfamily TK34_20790 SM00490 helicase superfamily c-terminal domain TK34_20835 SM01230 TK34_20835 TK34_20845 SM00387 Histidine kinase-like ATPases TK34_20845 SM00388 His Kinase A (phosphoacceptor) domain TK34_20850 SM00382 ATPases associated with a variety of cellular activities TK34_20850 SM00448 cheY-homologous receiver domain TK34_20860 SM00729 Elongator protein 3, MiaB family, Radical SAM TK34_20905 SM01001 AIR carboxylase TK34_20925 SM00257 Lysin motif TK34_20980 SM01002 Alanine dehydrogenase/PNT, C-terminal domain TK34_20980 SM01003 Alanine dehydrogenase/PNT, N-terminal domain TK34_21000 SM00530 Helix-turn-helix XRE-family like proteins TK34_21015 SM00342 helix_turn_helix, arabinose operon control protein TK34_21025 SM00831 Cation transporter/ATPase, N-terminus TK34_21080 SM00326 Src homology 3 domains TK34_21110 SM00382 ATPases associated with a variety of cellular activities TK34_21130 SM00829 Enoylreductase TK34_21180 SM00354 helix_turn _helix lactose operon repressor TK34_21220 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs TK34_21220 SM00474 3'-5' exonuclease TK34_21220 SM00475 5'-3' exonuclease TK34_21220 SM00482 DNA polymerase A domain TK34_21240 SM00971 Serine acetyltransferase, N-terminal TK34_21250 SM00448 cheY-homologous receiver domain TK34_21250 SM00862 Transcriptional regulatory protein, C terminal TK34_21255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_21255 SM00387 Histidine kinase-like ATPases TK34_21255 SM00388 His Kinase A (phosphoacceptor) domain TK34_21285 SM00563 Phosphate acyltransferases TK34_21290 SM01126 TK34_21290 TK34_21315 SM00829 Enoylreductase TK34_21320 SM00354 helix_turn _helix lactose operon repressor TK34_21370 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain TK34_21370 SM01232 TK34_21370 TK34_21440 SM00881 CoA binding domain TK34_21500 SM00448 cheY-homologous receiver domain TK34_21500 SM00862 Transcriptional regulatory protein, C terminal TK34_21505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TK34_21505 SM00387 Histidine kinase-like ATPases TK34_21505 SM00388 His Kinase A (phosphoacceptor) domain TK34_21550 SM00836 DALR anticodon binding domain TK34_21590 SM01126 TK34_21590 TK34_21620 SM00849 Metallo-beta-lactamase superfamily TK34_21625 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TK34_21625 SM00382 ATPases associated with a variety of cellular activities TK34_21645 SM00354 helix_turn _helix lactose operon repressor TK34_21665 SM00382 ATPases associated with a variety of cellular activities TK34_21670 SM00382 ATPases associated with a variety of cellular activities TK34_21675 SM00342 helix_turn_helix, arabinose operon control protein TK34_21685 SM00450 Rhodanese Homology Domain TK34_21720 SM00357 Cold shock protein domain TK34_21720 SM00382 ATPases associated with a variety of cellular activities TK34_21720 SM00959 Rho termination factor, N-terminal domain TK34_21730 SM00487 DEAD-like helicases superfamily TK34_21730 SM00490 helicase superfamily c-terminal domain TK34_21755 SM00052 Putative diguanylate phosphodiesterase TK34_21755 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TK34_21755 SM00091 PAS domain TK34_21755 SM00267 diguanylate cyclase TK34_21765 SM01004 Delta-aminolevulinic acid dehydratase TK34_21875 SM00421 helix_turn_helix, Lux Regulon TK34_21885 SM00420 helix_turn_helix, Deoxyribose operon repressor TK34_21885 SM01134 TK34_21885 TK34_21890 SM00448 cheY-homologous receiver domain TK34_21890 SM00862 Transcriptional regulatory protein, C terminal TK34_21895 SM00387 Histidine kinase-like ATPases TK34_21895 SM00388 His Kinase A (phosphoacceptor) domain TK34_21920 SM00382 ATPases associated with a variety of cellular activities TK34_21960 SM00470 ParB-like nuclease domain TK34_21975 SM01228 TK34_21975 TK34_21990 SM00382 ATPases associated with a variety of cellular activities TK34_21995 SM00382 ATPases associated with a variety of cellular activities TK34_22030 SM00382 ATPases associated with a variety of cellular activities TK34_22040 SM00062 Bacterial periplasmic substrate-binding proteins TK34_22040 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. TK34_22080 SM00420 helix_turn_helix, Deoxyribose operon repressor TK34_22080 SM01134 TK34_22080 TK34_22375 SM00644 TK34_22375 TK34_22375 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. TK34_22570 SM00857 Resolvase, N terminal domain TK34_22660 SM00382 ATPases associated with a variety of cellular activities TK34_22695 SM00382 ATPases associated with a variety of cellular activities TK34_22720 SM00052 Putative diguanylate phosphodiesterase TK34_22730 SM00422 helix_turn_helix, mercury resistance TK34_22755 SM00422 helix_turn_helix, mercury resistance TK34_22775 SM00857 Resolvase, N terminal domain