locus_tag	old_locus_tag	gene	Name	start	end	strand	product	note	type	ID	NCBI
RY45_00005	RY45_00005	dnaA	dnaA	223	1593	+	chromosomal replication initiation protein	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.	gene	gene0	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00005
RY45_00010	RY45_00010		RY45_00010	1612	2715	+	DNA polymerase III subunit beta		gene	gene1	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00010
RY45_00015	RY45_00015	recF	recF	2718	3821	+	recombination protein F	Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA	gene	gene2	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00015
RY45_00020	RY45_00020	gyrB	gyrB	3818	6229	+	DNA gyrase subunit B	negatively supercoils closed circular double-stranded DNA	gene	gene3	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00020
RY45_00025	RY45_00025		RY45_00025	6345	6722	-	drug:proton antiporter		gene	gene4	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00025
RY45_00030	RY45_00030		RY45_00030	6789	7493	-	DNA-binding protein		gene	gene5	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00030
RY45_00035	RY45_00035		RY45_00035	7727	8140	+	heat-shock protein		gene	gene6	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00035
RY45_00040	RY45_00040		RY45_00040	8233	8670	+	heat shock protein IbpA	with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress	gene	gene7	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00040
RY45_00045	RY45_00045	avtA	avtA	8744	9994	-	valine--pyruvate aminotransferase	transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis	gene	gene8	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00045
RY45_00050	RY45_00050		RY45_00050	10278	10511	+	hypothetical protein		gene	gene9	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00050
RY45_00055	RY45_00055		RY45_00055	10441	11265	-	AraC family transcriptional regulator		gene	gene10	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00055
RY45_00060	RY45_00060		RY45_00060	11358	12485	+	major facilitator transporter		gene	gene11	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00060
RY45_00065	RY45_00065		RY45_00065	12490	13173	-	transcriptional regulator		gene	gene12	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00065
RY45_00070	RY45_00070		RY45_00070	13204	15792	-	histidine kinase		gene	gene13	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00070
RY45_00075	RY45_00075		RY45_00075	15896	16423	-	ATPase		gene	gene14	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00075
RY45_00080	RY45_00080		RY45_00080	16484	18541	-	potassium-transporting ATPase subunit B	One of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions	gene	gene15	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00080
RY45_00085	RY45_00085		RY45_00085	18597	20279	-	ATPase		gene	gene16	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00085
RY45_00090	RY45_00090		RY45_00090	20722	22071	-	glutathione reductase	catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense	gene	gene17	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00090
RY45_00095	RY45_00095		RY45_00095	22148	24145	-	histidine kinase		gene	gene18	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00095
RY45_00100	RY45_00100		RY45_00100	24238	27318	-	transporter		gene	gene19	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00100
RY45_00105	RY45_00105		RY45_00105	27334	28440	-	membrane protein		gene	gene20	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00105
RY45_00110	RY45_00110		RY45_00110	28473	29036	-	TetR family transcriptional regulator		gene	gene21	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00110
RY45_00115	RY45_00115		RY45_00115	29297	29373	+	tRNA-Arg		tRNA	gene22	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00115
RY45_00120	RY45_00120		RY45_00120	29424	29499	+	tRNA-His		tRNA	gene23	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00120
RY45_00125	RY45_00125		RY45_00125	29520	29605	+	tRNA-Leu		tRNA	gene24	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00125
RY45_00130	RY45_00130		RY45_00130	29678	29754	+	tRNA-Pro		tRNA	gene25	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00130
RY45_00135	RY45_00135		RY45_00135	29940	30449	+	lectin		gene	gene26	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00135
RY45_00140	RY45_00140		RY45_00140	30454	31533	-	pyruvate kinase		gene	gene27	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00140
RY45_00145	RY45_00145		RY45_00145	31601	32938	-	MFS transporter		gene	gene28	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00145
RY45_00150	RY45_00150		RY45_00150	33561	34511	+	iron ABC transporter substrate-binding protein		gene	gene29	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00150
RY45_00155	RY45_00155		RY45_00155	34508	36940	+	phosphate starvation-inducible protein PsiE		gene	gene30	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00155
RY45_00160	RY45_00160		RY45_00160	36924	38201	+	chemotaxis protein CheY		gene	gene31	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00160
RY45_00165	RY45_00165		RY45_00165	38253	38567	+	hypothetical protein		gene	gene32	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00165
RY45_00170	RY45_00170		RY45_00170	38615	39427	-	hydrolase		gene	gene33	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00170
RY45_00175	RY45_00175		RY45_00175	39521	40561	-	lysophospholipase		gene	gene34	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00175
RY45_00180	RY45_00180		RY45_00180	40558	41223	-	hexapeptide transferase		gene	gene35	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00180
RY45_00185	RY45_00185		RY45_00185	41223	41954	-	tRNA guanosine-2'-O-methyltransferase	specifically modifies tRNA at position G18	gene	gene36	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00185
RY45_00190	RY45_00190		RY45_00190	42179	44296	-	guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase		gene	gene37	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00190
RY45_00195	RY45_00195	rpoZ	rpoZ	44434	44709	-	DNA-directed RNA polymerase subunit omega	Promotes RNA polymerase assembly%3B latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits	gene	gene38	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00195
RY45_00200	RY45_00200		RY45_00200	44789	45415	-	guanylate kinase		gene	gene39	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00200
RY45_00205	RY45_00205		RY45_00205	45687	46769	-	glycosyl transferase		gene	gene40	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00205
RY45_00210	RY45_00210		RY45_00210	46924	47637	+	3-deoxy-D-manno-octulosonic acid kinase	catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position	gene	gene41	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00210
RY45_00215	RY45_00215		RY45_00215	47708	48571	+	diguanylate cyclase		gene	gene42	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00215
RY45_00220	RY45_00220		RY45_00220	48579	49433	-	membrane protein		gene	gene43	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00220
RY45_00225	RY45_00225		RY45_00225	49477	49935	+	hypothetical protein		gene	gene44	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00225
RY45_00230	RY45_00230		RY45_00230	50220	51119	-	membrane protein		gene	gene45	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00230
RY45_00235	RY45_00235		RY45_00235	51211	52185	+	LysR family transcriptional regulator		gene	gene46	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00235
RY45_00240	RY45_00240		RY45_00240	52164	53177	-	tryptophanyl-tRNA synthetase		gene	gene47	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00240
RY45_00245	RY45_00245		RY45_00245	53369	53809	-	Universal stress protein A		gene	gene48	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00245
RY45_00250	RY45_00250		RY45_00250	54276	55463	+	trans-2-enoyl-CoA reductase	enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity	gene	gene49	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00250
RY45_00255	RY45_00255		RY45_00255	55479	57269	-	diguanylate cyclase		gene	gene50	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00255
RY45_00260	RY45_00260		RY45_00260	57479	58003	+	ferritin	cytoplasmic iron storage protein	gene	gene51	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00260
RY45_00265	RY45_00265		RY45_00265	58084	59271	+	membrane protein		gene	gene52	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00265
RY45_00270	RY45_00270		RY45_00270	59458	60678	-	Fosmidomycin resistance protein		gene	gene53	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00270
RY45_00275	RY45_00275		RY45_00275	60954	61592	+	leucine export protein LeuE		gene	gene54	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00275
RY45_00280	RY45_00280		RY45_00280	61636	62310	-	hypothetical protein		gene	gene55	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00280
RY45_00285	RY45_00285		RY45_00285	62325	63947	-	hypothetical protein		gene	gene56	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00285
RY45_00290	RY45_00290		RY45_00290	63950	66427	-	hypothetical protein		gene	gene57	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00290
RY45_00295	RY45_00295		RY45_00295	66479	67144	-	hypothetical protein		gene	gene58	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00295
RY45_00300	RY45_00300		RY45_00300	67204	67782	-	fimbrial protein		gene	gene59	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00300
RY45_00305	RY45_00305		RY45_00305	68383	69006	+	LuxR family transcriptional regulator		gene	gene60	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00305
RY45_00310	RY45_00310		RY45_00310	69009	72596	+	histidine kinase		gene	gene61	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00310
RY45_00315	RY45_00315		RY45_00315	72632	73072	-	hypothetical protein		gene	gene62	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00315
RY45_00320	RY45_00320		RY45_00320	73245	74918	+	membrane protein		gene	gene63	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00320
RY45_00325	RY45_00325		RY45_00325	74965	75696	+	LytTR family transcriptional regulator		gene	gene64	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00325
RY45_00330	RY45_00330		RY45_00330	75806	76996	+	membrane protein		gene	gene65	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00330
RY45_00335	RY45_00335		RY45_00335	77071	78195	-	phosphoribosylaminoimidazole carboxylase		gene	gene66	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00335
RY45_00340	RY45_00340		RY45_00340	78192	78701	-	N5-carboxyaminoimidazole ribonucleotide mutase		gene	gene67	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00340
RY45_00345	RY45_00345		RY45_00345	78764	79066	-	nitrogen regulatory protein P-II		gene	gene68	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00345
RY45_00350	RY45_00350		RY45_00350	79071	79997	-	permease		gene	gene69	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00350
RY45_00355	RY45_00355		RY45_00355	80231	81379	-	late control protein D		gene	gene70	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00355
RY45_00360	RY45_00360		RY45_00360	81379	81873	-	tail assembly protein		gene	gene71	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00360
RY45_00365	RY45_00365		RY45_00365	81886	84345	-	hypothetical protein		gene	gene72	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00365
RY45_00370	RY45_00370		RY45_00370	84342	84473	-	P2 GpE family protein		gene	gene73	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00370
RY45_00375	RY45_00375		RY45_00375	84482	84766	-	tail protein		gene	gene74	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00375
RY45_00380	RY45_00380		RY45_00380	84846	85364	-	major tail tube protein		gene	gene75	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00380
RY45_00385	RY45_00385		RY45_00385	85374	86552	-	tail sheath protein		gene	gene76	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00385
RY45_00390	RY45_00390		RY45_00390	86736	87143	-	tail fiber assembly protein		gene	gene77	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00390
RY45_00395	RY45_00395		RY45_00395	87154	88182	-	DNA inversion product		gene	gene78	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00395
RY45_00400	RY45_00400		RY45_00400	88179	88811	-	tail protein		gene	gene79	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00400
RY45_00405	RY45_00405		RY45_00405	88808	89707	-	baseplate assembly protein		gene	gene80	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00405
RY45_00410	RY45_00410		RY45_00410	89704	90063	-	baseplate assembly protein		gene	gene81	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00410
RY45_00415	RY45_00415		RY45_00415	90060	90632	-	baseplate assembly protein		gene	gene82	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00415
RY45_00420	RY45_00420		RY45_00420	90774	91343	-	hypothetical protein		gene	gene83	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00420
RY45_00425	RY45_00425		RY45_00425	91397	91867	-	tail fiber protein		gene	gene84	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00425
RY45_00430	RY45_00430		RY45_00430	91978	92445	-	LysB		gene	gene85	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00430
RY45_00435	RY45_00435		RY45_00435	92596	93414	-	peptidoglycan-binding protein		gene	gene86	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00435
RY45_00440	RY45_00440		RY45_00440	93411	93719	-	hypothetical protein		gene	gene87	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00440
RY45_00445	RY45_00445		RY45_00445	93721	93981	-	hypothetical protein		gene	gene88	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00445
RY45_00450	RY45_00450		RY45_00450	93983	94348	-	membrane protein		gene	gene89	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00450
RY45_00455	RY45_00455		RY45_00455	94364	94594	-	conjugal transfer protein TraR		gene	gene90	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00455
RY45_00460	RY45_00460		RY45_00460	94597	94800	-	tail protein X		gene	gene91	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00460
RY45_00465	RY45_00465		RY45_00465	94800	95270	-	Gpl		gene	gene92	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00465
RY45_00470	RY45_00470		RY45_00470	95380	96063	-	terminase		gene	gene93	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00470
RY45_00475	RY45_00475		RY45_00475	96073	97125	-	capsid protein		gene	gene94	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00475
RY45_00480	RY45_00480		RY45_00480	97138	97968	-	capsid protein		gene	gene95	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00480
RY45_00485	RY45_00485		RY45_00485	98117	99886	+	oxidoreductase		gene	gene96	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00485
RY45_00490	RY45_00490		RY45_00490	99919	100947	+	capsid portal protein		gene	gene97	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00490
RY45_00495	RY45_00495		RY45_00495	101401	101586	-	hypothetical protein		gene	gene98	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00495
RY45_00500	RY45_00500		RY45_00500	101866	102159	+	hypothetical protein		gene	gene99	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00500
RY45_00505	RY45_00505		RY45_00505	102678	102866	-	hypothetical protein		gene	gene100	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00505
RY45_00510	RY45_00510		RY45_00510	103355	103696	-	phage protein		gene	gene101	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00510
RY45_00515	RY45_00515		RY45_00515	103693	104043	-	hypothetical protein		gene	gene102	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00515
RY45_00520	RY45_00520		RY45_00520	104036	104440	-	hypothetical protein		gene	gene103	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00520
RY45_00525	RY45_00525		RY45_00525	104425	105132	-	hypothetical protein		gene	gene104	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00525
RY45_00530	RY45_00530		RY45_00530	105129	105356	-	hypothetical protein		gene	gene105	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00530
RY45_00535	RY45_00535		RY45_00535	105367	107769	-	replication initiation protein		gene	gene106	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00535
RY45_00540	RY45_00540		RY45_00540	107751	108122	-	hypothetical protein		gene	gene107	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00540
RY45_00545	RY45_00545		RY45_00545	108200	108445	-	hypothetical protein		gene	gene108	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00545
RY45_00550	RY45_00550		RY45_00550	108442	108663	-	hypothetical protein		gene	gene109	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00550
RY45_00555	RY45_00555	hypothetical protein	hypothetical protein	108660	108966	-		disrupted	pseudogene	gene110	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00555
RY45_00560	RY45_00560		RY45_00560	108963	109145	-	hypothetical protein		gene	gene111	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00560
RY45_00565	RY45_00565		RY45_00565	109142	109432	-	hypothetical protein		gene	gene112	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00565
RY45_00570	RY45_00570		RY45_00570	109513	109812	-	hypothetical protein		gene	gene113	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00570
RY45_00575	RY45_00575		RY45_00575	109954	110118	-	membrane protein		gene	gene114	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00575
RY45_00580	RY45_00580		RY45_00580	110108	110542	-	TciA		gene	gene115	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00580
RY45_00585	RY45_00585		RY45_00585	110579	111022	-	hypothetical protein		gene	gene116	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00585
RY45_00590	RY45_00590		RY45_00590	111038	111256	-	hypothetical protein		gene	gene117	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00590
RY45_00595	RY45_00595	hypothetical protein	hypothetical protein	111361	111570	-		disrupted	pseudogene	gene118	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00595
RY45_00600	RY45_00600		RY45_00600	111583	112095	-	phage protein		gene	gene119	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00600
RY45_00605	RY45_00605		RY45_00605	112123	112332	-	regulator for prophage		gene	gene120	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00605
RY45_00610	RY45_00610		RY45_00610	112515	113294	+	hypothetical protein		gene	gene121	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00610
RY45_00615	RY45_00615		RY45_00615	113305	113844	+	hypothetical protein		gene	gene122	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00615
RY45_00620	RY45_00620		RY45_00620	113841	114911	+	recombinase		gene	gene123	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00620
RY45_00625	RY45_00625		RY45_00625	114963	115871	+	LysR family transcriptional regulator		gene	gene124	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00625
RY45_00630	RY45_00630		RY45_00630	116136	117971	+	ligand-gated channel protein		gene	gene125	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00630
RY45_00635	RY45_00635		RY45_00635	118035	118541	-	hypothetical protein		gene	gene126	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00635
RY45_00640	RY45_00640		RY45_00640	118572	118856	-	hypothetical protein		gene	gene127	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00640
RY45_00645	RY45_00645		RY45_00645	118898	119389	-	RNA-binding protein		gene	gene128	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00645
RY45_00650	RY45_00650		RY45_00650	119990	121544	+	16S ribosomal RNA		rRNA	gene129	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00650
RY45_00655	RY45_00655		RY45_00655	121742	121817	+	tRNA-Glu		tRNA	gene130	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00655
RY45_00660	RY45_00660		RY45_00660	122048	124962	+	23S ribosomal RNA		rRNA	gene131	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00660
RY45_00665	RY45_00665		RY45_00665	125067	125181	+	5S ribosomal RNA		rRNA	gene132	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00665
RY45_00670	RY45_00670		RY45_00670	125288	125363	+	tRNA-Thr		tRNA	gene133	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00670
RY45_00675	RY45_00675		RY45_00675	125413	125616	-	hypothetical protein		gene	gene134	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00675
RY45_00680	RY45_00680		RY45_00680	125762	127027	+	cytosine deaminase	Catalyzes the deamination of cytosine to uracil and ammonia	gene	gene135	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00680
RY45_00685	RY45_00685		RY45_00685	127115	127492	+	camphor resistance protein CrcB	may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling	gene	gene136	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00685
RY45_00690	RY45_00690	ubiE	ubiE	127558	128310	+	ubiquinone biosynthesis methyltransferase UbiE	Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone	gene	gene137	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00690
RY45_00695	RY45_00695		RY45_00695	128319	128927	+	hypothetical protein		gene	gene138	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00695
RY45_00700	RY45_00700	ubiB	ubiB	128927	130567	+	ubiquinone biosynthesis protein UbiB	an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions	gene	gene139	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00700
RY45_00705	RY45_00705	tatA	tatA	130608	130856	+	preprotein translocase subunit SecA	TatA%3B similar to TatE that is found in some proteobacteria%3B part of system that translocates proteins with a conserved twin arginine motif across the inner membrane%3B capable of translocating folded substrates typically those with bound cofactors%3B similar to a protein import system in thylakoid membranes	gene	gene140	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00705
RY45_00710	RY45_00710		RY45_00710	130860	131303	+	preprotein translocase subunit TatB		gene	gene141	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00710
RY45_00715	RY45_00715		RY45_00715	131300	132055	+	twin-arginine protein translocation system subunit TatC	with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane	gene	gene142	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00715
RY45_00720	RY45_00720		RY45_00720	132167	132952	+	DNase TatD	magnesium dependent%3B involved in quality control of mutated Tat exported substrates%3B not involved in the Sec-independent protein export system	gene	gene143	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00720
RY45_00725	RY45_00725		RY45_00725	132956	133975	+	delta-aminolevulinic acid dehydratase	catalyzes the formation of porphobilinogen from 5-aminolevulinate	gene	gene144	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00725
RY45_00730	RY45_00730		RY45_00730	134198	136240	+	oligopeptidase A		gene	gene145	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00730
RY45_00735	RY45_00735		RY45_00735	136445	138988	+	diguanylate phosphodiesterase		gene	gene146	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00735
RY45_00740	RY45_00740		RY45_00740	139073	139819	+	16S rRNA methyltransferase		gene	gene147	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00740
RY45_00745	RY45_00745		RY45_00745	139889	140158	-	modulator protein		gene	gene148	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00745
RY45_00750	RY45_00750		RY45_00750	140184	141164	-	hypothetical protein		gene	gene149	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00750
RY45_00755	RY45_00755		RY45_00755	141370	142860	-	guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase		gene	gene150	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00755
RY45_00760	RY45_00760		RY45_00760	142875	144164	-	RNA helicase		gene	gene151	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00760
RY45_00765	RY45_00765		RY45_00765	144278	144604	+	thioredoxin		gene	gene152	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00765
RY45_00770	RY45_00770	rho	rho	144812	146077	+	transcription termination factor Rho	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes	gene	gene153	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00770
RY45_00775	RY45_00775		RY45_00775	146184	147191	+	hypothetical protein		gene	gene154	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00775
RY45_00780	RY45_00780		RY45_00780	147222	148691	+	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol	gene	gene155	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00780
RY45_00785	RY45_00785	fre	fre	148860	149558	+	FMN reductase	NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin	gene	gene156	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00785
RY45_00790	RY45_00790		RY45_00790	149688	149945	-	cytoplasmic protein		gene	gene157	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00790
RY45_00795	RY45_00795		RY45_00795	150247	152664	+	lipase		gene	gene158	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00795
RY45_00800	RY45_00800		RY45_00800	152802	153635	-	peptidase S54		gene	gene159	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00800
RY45_00805	RY45_00805		RY45_00805	153632	153955	-	thiosulfate sulfurtransferase		gene	gene160	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00805
RY45_00810	RY45_00810		RY45_00810	154149	154712	+	lysine transporter LysE		gene	gene161	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00810
RY45_00815	RY45_00815		RY45_00815	154709	155542	-	AraC family transcriptional regulator		gene	gene162	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00815
RY45_00820	RY45_00820	livF	livF	155546	156247	-	leucine/isoleucine/valine transporter ATP-binding subunit	with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine	gene	gene163	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00820
RY45_00825	RY45_00825	livG	livG	156258	157031	-	leucine/isoleucine/valine transporter ATP-binding subunit	Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine	gene	gene164	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00825
RY45_00830	RY45_00830	livM	livM	157028	158296	-	leucine/isoleucine/valine transporter permease subunit	Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine	gene	gene165	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00830
RY45_00835	RY45_00835		RY45_00835	158296	159222	-	branched-chain amino acid transporter permease subunit LivH	LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter	gene	gene166	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00835
RY45_00840	RY45_00840		RY45_00840	159287	160408	-	leucine ABC transporter substrate-binding protein	with LivFGHM is involved in the high affinity leucine transport	gene	gene167	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00840
RY45_00845	RY45_00845		RY45_00845	160844	161848	+	transcriptional regulator	binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers	gene	gene168	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00845
RY45_00850	RY45_00850		RY45_00850	161918	163237	-	6-phospho-alpha-glucosidase		gene	gene169	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00850
RY45_00855	RY45_00855		RY45_00855	163240	164826	-	PTS alpha-glucoside transporter subunit IIBC		gene	gene170	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00855
RY45_00860	RY45_00860		RY45_00860	165111	165818	+	GntR family transcriptional regulator		gene	gene171	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00860
RY45_00865	RY45_00865		RY45_00865	165902	167422	-	transcriptional regulator	Required for the expression of anaerobic nitric oxide (NO) reductase%3B acts as a transcriptional activator for the norVW operon	gene	gene172	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00865
RY45_00870	RY45_00870		RY45_00870	167593	169086	+	nitric oxide reductase	detoxifies nitric oxide using NADH	gene	gene173	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00870
RY45_00875	RY45_00875		RY45_00875	169083	170249	+	NADH:flavorubredoxin oxidoreductase		gene	gene174	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00875
RY45_00880	RY45_00880		RY45_00880	170301	170642	+	cytoplasmic protein		gene	gene175	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00880
RY45_00885	RY45_00885		RY45_00885	170764	171981	+	ferredoxin		gene	gene176	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00885
RY45_00890	RY45_00890		RY45_00890	172269	173495	+	TnaB		gene	gene177	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00890
RY45_00895	RY45_00895		RY45_00895	173662	173961	+	hypothetical protein		gene	gene178	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00895
RY45_00900	RY45_00900		RY45_00900	174084	174440	-	molecular chaperone		gene	gene179	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00900
RY45_00905	RY45_00905		RY45_00905	174639	176180	+	ADP-ribosyltransferase		gene	gene180	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00905
RY45_00910	RY45_00910		RY45_00910	176264	176743	-	phenylalanine--tRNA ligase		gene	gene181	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00910
RY45_00915	RY45_00915		RY45_00915	176857	177261	-	g-type lysozyme inhibitor		gene	gene182	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00915
RY45_00920	RY45_00920		RY45_00920	177492	177998	+	adenylylsulfate kinase		gene	gene183	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00920
RY45_00925	RY45_00925		RY45_00925	178864	180933	-	glycine-tRNA synthetase subunit beta		gene	gene184	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00925
RY45_00930	RY45_00930		RY45_00930	180943	181872	-	glycyl-tRNA synthetase		gene	gene185	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00930
RY45_00935	RY45_00935		RY45_00935	182082	182663	+	DNA-3-methyladenine glycosidase		gene	gene186	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00935
RY45_00940	RY45_00940		RY45_00940	182726	183286	-	isochorismatase		gene	gene187	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00940
RY45_00945	RY45_00945		RY45_00945	183543	184199	+	membrane protein		gene	gene188	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00945
RY45_00950	RY45_00950		RY45_00950	184344	184451	-	endoribonuclease L-PSP		gene	gene189	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00950
RY45_00955	RY45_00955		RY45_00955	184462	184809	-	endoribonuclease L-PSP		gene	gene190	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00955
RY45_00960	RY45_00960		RY45_00960	184831	185076	-	sulfurtransferase		gene	gene191	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00960
RY45_00965	RY45_00965		RY45_00965	185248	185439	+	hypothetical protein		gene	gene192	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00965
RY45_00970	RY45_00970		RY45_00970	185512	186750	-	sugar ABC transporter substrate-binding protein		gene	gene193	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00970
RY45_00975	RY45_00975		RY45_00975	186755	188200	-	histidine kinase		gene	gene194	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00975
RY45_00980	RY45_00980		RY45_00980	188252	188974	-	chemotaxis protein CheY		gene	gene195	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00980
RY45_00985	RY45_00985	fadA	fadA	189299	190462	-	3-ketoacyl-CoA thiolase	FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids	gene	gene196	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00985
RY45_00990	RY45_00990	fadB	fadB	190484	192631	-	multifunctional fatty acid oxidation complex subunit alpha	includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids	gene	gene197	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00990
RY45_00995	RY45_00995		RY45_00995	192834	194771	-	acetoacetyl-CoA synthetase		gene	gene198	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_00995
RY45_01000	RY45_01000		RY45_01000	194962	196284	+	proline dipeptidase	catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters	gene	gene199	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01000
RY45_01005	RY45_01005		RY45_01005	196284	196901	+	GTP-binding protein		gene	gene200	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01005
RY45_01010	RY45_01010		RY45_01010	196938	198395	+	potassium transporter		gene	gene201	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01010
RY45_01015	RY45_01015		RY45_01015	198403	198927	+	protoporphyrinogen oxidase		gene	gene202	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01015
RY45_01020	RY45_01020		RY45_01020	199369	200923	+	16S ribosomal RNA		rRNA	gene203	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01020
RY45_01025	RY45_01025		RY45_01025	201121	201196	+	tRNA-Glu		tRNA	gene204	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01025
RY45_01030	RY45_01030		RY45_01030	201427	204341	+	23S ribosomal RNA		rRNA	gene205	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01030
RY45_01035	RY45_01035		RY45_01035	204446	204560	+	5S ribosomal RNA		rRNA	gene206	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01035
RY45_01040	RY45_01040		RY45_01040	204651	207227	-	protein acetyltransferase	catalyzes the acetylation of lysine	gene	gene207	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01040
RY45_01045	RY45_01045		RY45_01045	207300	207491	-	hypothetical protein		gene	gene208	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01045
RY45_01050	RY45_01050		RY45_01050	207661	208533	+	hypothetical protein		gene	gene209	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01050
RY45_01055	RY45_01055		RY45_01055	208522	209415	-	transcriptional regulator		gene	gene210	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01055
RY45_01060	RY45_01060		RY45_01060	209639	211120	+	ketol-acid reductoisomerase	catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis	gene	gene211	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01060
RY45_01065	RY45_01065	pgi	pgi	211269	212918	-	glucose-6-phosphate isomerase	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family	gene	gene212	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01065
RY45_01070	RY45_01070		RY45_01070	213076	213276	-	hypothetical protein		gene	gene213	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01070
RY45_01075	RY45_01075		RY45_01075	213335	213523	+	holin		gene	gene214	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01075
RY45_01080	RY45_01080		RY45_01080	213649	214485	-	mechanosensitive ion channel protein		gene	gene215	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01080
RY45_01085	RY45_01085		RY45_01085	214672	215268	-	TetR family transcriptional regulator		gene	gene216	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01085
RY45_01090	RY45_01090		RY45_01090	215337	215795	-	deoxyuridine 5'-triphosphate nucleotidohydrolase	catalyzes the formation of dUMP from dUTP	gene	gene217	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01090
RY45_01095	RY45_01095		RY45_01095	215836	217038	-	phosphopantothenoylcysteine decarboxylase		gene	gene218	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01095
RY45_01100	RY45_01100		RY45_01100	217186	217860	+	hypothetical protein		gene	gene219	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01100
RY45_01105	RY45_01105		RY45_01105	218245	218412	+	50S ribosomal protein L33		gene	gene220	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01105
RY45_01110	RY45_01110		RY45_01110	218506	218961	+	hypothetical protein		gene	gene221	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01110
RY45_01115	RY45_01115		RY45_01115	218991	219803	+	formamidopyrimidine-DNA glycosylase	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases	gene	gene222	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01115
RY45_01120	RY45_01120		RY45_01120	219982	220863	+	hypothetical protein		gene	gene223	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01120
RY45_01125	RY45_01125		RY45_01125	220918	221400	-	phosphopantetheine adenylyltransferase		gene	gene224	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01125
RY45_01130	RY45_01130		RY45_01130	221624	222667	+	ADP-heptose--LPS heptosyltransferase		gene	gene225	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01130
RY45_01135	RY45_01135		RY45_01135	222737	223525	-	glycosyltransferase		gene	gene226	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01135
RY45_01140	RY45_01140		RY45_01140	223767	224882	+	ADP-heptose--LPS heptosyltransferase		gene	gene227	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01140
RY45_01145	RY45_01145		RY45_01145	224884	226149	+	3-deoxy-D-manno-octulosonic acid transferase		gene	gene228	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01145
RY45_01150	RY45_01150		RY45_01150	226220	227476	-	PTS beta-glucoside transporter subunit IIBC		gene	gene229	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01150
RY45_01155	RY45_01155		RY45_01155	227537	227824	-	PTS ascorbate transporter subunit IIB		gene	gene230	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01155
RY45_01160	RY45_01160	cmtB	cmtB	227857	228300	-	PTS system mannitol-specific transporter subunit IIA	TolM%3B with CmtA (IIBC)%2C CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein	gene	gene231	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01160
RY45_01165	RY45_01165		RY45_01165	228553	229575	+	LacI family transcriptional regulator		gene	gene232	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01165
RY45_01170	RY45_01170		RY45_01170	229605	230585	+	quinone oxidoreductase		gene	gene233	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01170
RY45_01175	RY45_01175		RY45_01175	230918	231253	+	hypothetical protein		gene	gene234	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01175
RY45_01180	RY45_01180		RY45_01180	231543	231977	-	flagellar basal body protein FliL		gene	gene235	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01180
RY45_01185	RY45_01185		RY45_01185	232123	232659	+	chorismate--pyruvate lyase		gene	gene236	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01185
RY45_01190	RY45_01190	ubiA	ubiA	232656	233519	+	4-hydroxybenzoate polyprenyltransferase	catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway	gene	gene237	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01190
RY45_01195	RY45_01195		RY45_01195	233585	236008	-	glycerol-3-phosphate acyltransferase	PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA	gene	gene238	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01195
RY45_01200	RY45_01200		RY45_01200	236213	236836	+	LexA family transcriptional regulator		gene	gene239	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01200
RY45_01205	RY45_01205		RY45_01205	237277	237564	+	hypothetical protein		gene	gene240	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01205
RY45_01210	RY45_01210		RY45_01210	237786	238412	+	photosynthetic protein synthase I		gene	gene241	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01210
RY45_01215	RY45_01215		RY45_01215	238423	239820	+	multidrug transporter MatE		gene	gene242	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01215
RY45_01220	RY45_01220		RY45_01220	239849	240319	-	rRNA methylase	member of the SPOUT superfamily of RNA methyltransferases	gene	gene243	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01220
RY45_01225	RY45_01225		RY45_01225	240388	241743	-	histidine kinase		gene	gene244	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01225
RY45_01230	RY45_01230		RY45_01230	241740	242435	-	transcriptional regulator	response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system	gene	gene245	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01230
RY45_01235	RY45_01235	fieF	fieF	242522	243433	+	ferrous iron transporter	member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc(II) in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers	gene	gene246	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01235
RY45_01240	RY45_01240	cysE	cysE	243442	244221	+	serine acetyltransferase	catalyzes the O-acetylation of serine	gene	gene247	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01240
RY45_01245	RY45_01245		RY45_01245	244243	245523	+	hypothetical protein		gene	gene248	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01245
RY45_01250	RY45_01250		RY45_01250	245747	245956	+	cell division protein ZapB		gene	gene249	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01250
RY45_01255	RY45_01255		RY45_01255	246029	246679	-	isoprenoid biosynthesis protein		gene	gene250	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01255
RY45_01260	RY45_01260		RY45_01260	247080	249833	+	DNA polymerase I	has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair	gene	gene251	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01260
RY45_01265	RY45_01265		RY45_01265	249912	250451	-	anhydrase		gene	gene252	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01265
RY45_01270	RY45_01270		RY45_01270	250903	252457	+	16S ribosomal RNA		rRNA	gene253	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01270
RY45_01275	RY45_01275		RY45_01275	252524	252600	+	tRNA-Ile		tRNA	gene254	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01275
RY45_01280	RY45_01280		RY45_01280	252611	252686	+	tRNA-Ala		tRNA	gene255	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01280
RY45_01285	RY45_01285		RY45_01285	252919	255836	+	23S ribosomal RNA		rRNA	gene256	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01285
RY45_01290	RY45_01290		RY45_01290	255898	256012	+	5S ribosomal RNA		rRNA	gene257	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01290
RY45_01295	RY45_01295		RY45_01295	256119	256194	+	tRNA-Thr		tRNA	gene258	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01295
RY45_01300	RY45_01300		RY45_01300	256218	256332	+	5S ribosomal RNA		rRNA	gene259	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01300
RY45_01305	RY45_01305		RY45_01305	256487	257452	+	transcriptional regulator		gene	gene260	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01305
RY45_01310	RY45_01310	ebgA	ebgA	257774	260848	+	beta-D-galactosidase	in Escherichia coli this is the second beta-galactosidase system	gene	gene261	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01310
RY45_01315	RY45_01315	ebgC	ebgC	260845	261300	+	beta-D-galactosidase	in Escherichia coli this is the second beta-galactosidase system	gene	gene262	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01315
RY45_01320	RY45_01320		RY45_01320	261403	262848	+	amino acid permease		gene	gene263	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01320
RY45_01325	RY45_01325		RY45_01325	262925	263263	+	methionyl-tRNA synthetase		gene	gene264	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01325
RY45_01330	RY45_01330		RY45_01330	263431	264867	+	amino acid permease		gene	gene265	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01330
RY45_01335	RY45_01335		RY45_01335	265079	266050	+	hypothetical protein		gene	gene266	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01335
RY45_01340	RY45_01340		RY45_01340	266108	268258	-	SAM-dependent methyltransferase		gene	gene267	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01340
RY45_01345	RY45_01345		RY45_01345	268623	269345	+	hypothetical protein		gene	gene268	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01345
RY45_01350	RY45_01350		RY45_01350	269399	270235	-	S-formylglutathione hydrolase		gene	gene269	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01350
RY45_01355	RY45_01355		RY45_01355	270285	271412	-	S-(hydroxymethyl)glutathione dehydrogenase	catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols	gene	gene270	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01355
RY45_01360	RY45_01360		RY45_01360	271532	272437	+	LysR family transcriptional regulator		gene	gene271	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01360
RY45_01365	RY45_01365		RY45_01365	272498	273463	-	sugar ABC transporter permease		gene	gene272	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01365
RY45_01370	RY45_01370		RY45_01370	273521	274636	-	sugar ABC transporter permease		gene	gene273	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01370
RY45_01375	RY45_01375		RY45_01375	274719	276299	-	heme ABC transporter ATP-binding protein		gene	gene274	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01375
RY45_01380	RY45_01380		RY45_01380	276383	277381	-	membrane protein		gene	gene275	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01380
RY45_01385	RY45_01385	uvrD	uvrD	277814	279985	+	DNA-dependent helicase II	unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.	gene	gene276	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01385
RY45_01390	RY45_01390		RY45_01390	281765	281965	-	hypothetical protein		gene	gene277	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01390
RY45_01395	RY45_01395		RY45_01395	282597	282782	-	hypothetical protein		gene	gene278	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01395
RY45_01400	RY45_01400		RY45_01400	282934	283416	+	hypothetical protein		gene	gene279	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01400
RY45_01405	RY45_01405		RY45_01405	283520	284413	-	transcriptional regulator		gene	gene280	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01405
RY45_01410	RY45_01410		RY45_01410	284560	285345	-	hypothetical protein		gene	gene281	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01410
RY45_01415	RY45_01415		RY45_01415	285580	285921	+	Variant SH3 domain-containing protein		gene	gene282	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01415
RY45_01420	RY45_01420		RY45_01420	286018	287421	-	lipoprotein		gene	gene283	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01420
RY45_01425	RY45_01425		RY45_01425	287650	287847	-	selenoprotein YdfZ		gene	gene284	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01425
RY45_01430	RY45_01430		RY45_01430	288126	288626	+	hypothetical protein		gene	gene285	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01430
RY45_01435	RY45_01435		RY45_01435	288716	289165	-	polyketide cyclase		gene	gene286	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01435
RY45_01440	RY45_01440		RY45_01440	289245	289757	-	cupin		gene	gene287	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01440
RY45_01445	RY45_01445		RY45_01445	289853	290509	-	hypothetical protein		gene	gene288	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01445
RY45_01450	RY45_01450		RY45_01450	290781	291455	+	hypothetical protein		gene	gene289	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01450
RY45_01455	RY45_01455		RY45_01455	291465	292349	-	LysR family transcriptional regulator		gene	gene290	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01455
RY45_01460	RY45_01460		RY45_01460	292451	293071	+	lysine transporter LysE		gene	gene291	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01460
RY45_01465	RY45_01465		RY45_01465	293198	294391	+	hypothetical protein		gene	gene292	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01465
RY45_01470	RY45_01470		RY45_01470	294478	295512	-	YeeE/YedE family protein		gene	gene293	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01470
RY45_01475	RY45_01475		RY45_01475	296815	299577	+	magnesium ABC transporter ATPase	P-type%3B involved in magnesium transport into the cytoplasm	gene	gene294	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01475
RY45_01480	RY45_01480		RY45_01480	299682	300329	-	amino acid transporter LysE		gene	gene295	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01480
RY45_01485	RY45_01485		RY45_01485	300409	301227	-	AraC family transcriptional regulator		gene	gene296	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01485
RY45_01490	RY45_01490		RY45_01490	301295	302197	-	chloramphenical resistance permease RarD		gene	gene297	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01490
RY45_01495	RY45_01495		RY45_01495	302622	304118	-	aldehyde dehydrogenase		gene	gene298	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01495
RY45_01500	RY45_01500		RY45_01500	304380	304922	-	XRE family transcriptional regulator		gene	gene299	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01500
RY45_01505	RY45_01505		RY45_01505	305108	306439	+	omega amino acid--pyruvate aminotransferase	catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate	gene	gene300	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01505
RY45_01510	RY45_01510		RY45_01510	306538	308034	+	methylmalonate-semialdehyde dehydrogenase		gene	gene301	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01510
RY45_01515	RY45_01515		RY45_01515	308119	308874	+	glutamine amidotransferase		gene	gene302	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01515
RY45_01520	RY45_01520		RY45_01520	308871	309986	+	alanine dehydrogenase		gene	gene303	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01520
RY45_01525	RY45_01525		RY45_01525	310106	310945	+	carbohydrate kinase		gene	gene304	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01525
RY45_01530	RY45_01530		RY45_01530	311245	311697	+	BadM/Rrf2 family transcriptional regulator		gene	gene305	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01530
RY45_01535	RY45_01535		RY45_01535	311756	312268	-	ferredoxin		gene	gene306	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01535
RY45_01540	RY45_01540		RY45_01540	312407	312622	+	hypothetical protein		gene	gene307	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01540
RY45_01545	RY45_01545	DNA recombination protein RmuC	DNA recombination protein RmuC	312619	313932	+		disrupted	pseudogene	gene308	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01545
RY45_01550	RY45_01550		RY45_01550	314064	315506	-	potassium transporter TrkH		gene	gene309	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01550
RY45_01555	RY45_01555	trkA	trkA	315603	316979	-	potassium transporter peripheral membrane component	involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain	gene	gene310	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01555
RY45_01560	RY45_01560		RY45_01560	317127	318419	-	16S rRNA methyltransferase	catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase	gene	gene311	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01560
RY45_01565	RY45_01565	fmt	fmt	318476	319420	-	methionyl-tRNA formyltransferase	modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth	gene	gene312	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01565
RY45_01570	RY45_01570		RY45_01570	319433	319945	-	peptide deformylase		gene	gene313	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01570
RY45_01575	RY45_01575		RY45_01575	320054	321142	+	peptidoglycan-binding protein		gene	gene314	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01575
RY45_01580	RY45_01580		RY45_01580	321144	322259	+	DNA-binding protein		gene	gene315	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01580
RY45_01585	RY45_01585		RY45_01585	322252	322725	+	hypothetical protein		gene	gene316	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01585
RY45_01590	RY45_01590		RY45_01590	322781	323338	+	cytochrome C551		gene	gene317	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01590
RY45_01595	RY45_01595		RY45_01595	323413	323916	+	phosphoribosylaminoimidazole carboxylase		gene	gene318	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01595
RY45_01600	RY45_01600		RY45_01600	324051	324611	+	tRNA threonylcarbamoyladenosine biosynthesis protein RimN		gene	gene319	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01600
RY45_01605	RY45_01605		RY45_01605	324706	325614	+	coproporphyrinogen III oxidase		gene	gene320	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01605
RY45_01610	RY45_01610		RY45_01610	325718	326539	+	shikimate dehydrogenase		gene	gene321	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01610
RY45_01615	RY45_01615		RY45_01615	326536	326796	+	transcriptional regulator		gene	gene322	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01615
RY45_01620	RY45_01620		RY45_01620	327587	328237	-	GTP-binding protein		gene	gene323	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01620
RY45_01625	RY45_01625		RY45_01625	328380	328997	+	cytochrome C		gene	gene324	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01625
RY45_01630	RY45_01630		RY45_01630	329427	329621	+	hypothetical protein		gene	gene325	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01630
RY45_01635	RY45_01635		RY45_01635	329825	330403	+	GTPase activator		gene	gene326	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01635
RY45_01640	RY45_01640		RY45_01640	330415	330855	+	hypothetical protein		gene	gene327	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01640
RY45_01645	RY45_01645		RY45_01645	330883	332256	+	coproporphyrinogen III oxidase	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III	gene	gene328	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01645
RY45_01650	RY45_01650		RY45_01650	332325	333326	-	adenosine deaminase		gene	gene329	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01650
RY45_01655	RY45_01655	glnG	glnG	333468	334886	-	nitrogen regulation protein NR(I)	response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54	gene	gene330	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01655
RY45_01660	RY45_01660	glnL	glnL	334896	335951	-	nitrogen regulation protein NR(II)	sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation	gene	gene331	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01660
RY45_01665	RY45_01665		RY45_01665	336032	336613	-	hypothetical protein		gene	gene332	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01665
RY45_01670	RY45_01670	glnA	glnA	336705	338114	-	glutamine synthetase	forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme	gene	gene333	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01670
RY45_01675	RY45_01675		RY45_01675	338466	340277	+	GTP-binding protein TypA		gene	gene334	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01675
RY45_01680	RY45_01680		RY45_01680	340451	341323	+	membrane protein		gene	gene335	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01680
RY45_01685	RY45_01685		RY45_01685	341348	341464	+	rbn		gene	gene336	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01685
RY45_01690	RY45_01690		RY45_01690	341545	341982	+	D-tyrosyl-tRNA(Tyr) deacylase	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine	gene	gene337	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01690
RY45_01695	RY45_01695		RY45_01695	341971	342648	-	SAM-dependent methyltransferase		gene	gene338	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01695
RY45_01700	RY45_01700		RY45_01700	342700	342834	+	acetyltransferase		gene	gene339	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01700
RY45_01705	RY45_01705		RY45_01705	342944	343852	+	hypothetical protein		gene	gene340	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01705
RY45_01710	RY45_01710		RY45_01710	343915	345981	-	membrane assembly protein AsmA		gene	gene341	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01710
RY45_01715	RY45_01715		RY45_01715	346040	348109	-	ATP-dependent DNA helicase RecG	catalyzes branch migration in Holliday junction intermediates	gene	gene342	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01715
RY45_01720	RY45_01720	pssA	pssA	348289	349638	-	phosphatidylserine synthase	catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome	gene	gene343	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01720
RY45_01725	RY45_01725		RY45_01725	349785	351125	-	gluconate transporter		gene	gene344	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01725
RY45_01730	RY45_01730	idnK	idnK	351371	351880	+	gluconate kinase		gene	gene345	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01730
RY45_01735	RY45_01735		RY45_01735	351877	353673	+	phosphogluconate dehydratase	catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate	gene	gene346	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01735
RY45_01740	RY45_01740		RY45_01740	353697	354338	+	keto-deoxy-phosphogluconate aldolase	catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate	gene	gene347	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01740
RY45_01745	RY45_01745		RY45_01745	354435	355442	-	transcriptional regulator		gene	gene348	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01745
RY45_01750	RY45_01750		RY45_01750	355533	356183	+	fluoroquinolone resistance protein		gene	gene349	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01750
RY45_01755	RY45_01755		RY45_01755	356305	357651	-	peptidase M23		gene	gene350	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01755
RY45_01760	RY45_01760		RY45_01760	357661	359190	-	phosphoglyceromutase	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate	gene	gene351	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01760
RY45_01765	RY45_01765		RY45_01765	359516	359947	+	hypothetical protein		gene	gene352	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01765
RY45_01770	RY45_01770		RY45_01770	359995	360465	+	preprotein translocase subunit SecB	molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA	gene	gene353	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01770
RY45_01775	RY45_01775		RY45_01775	360468	361472	+	glycerol-3-phosphate dehydrogenase		gene	gene354	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01775
RY45_01780	RY45_01780		RY45_01780	361543	362121	-	amino acid ABC transporter substrate-binding protein		gene	gene355	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01780
RY45_01785	RY45_01785		RY45_01785	362202	362930	-	competence protein ComF		gene	gene356	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01785
RY45_01790	RY45_01790		RY45_01790	362967	363731	+	pimelyl-ACP methyl ester esterase		gene	gene357	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01790
RY45_01795	RY45_01795		RY45_01795	363803	364036	+	flagellar hook protein FlgE		gene	gene358	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01795
RY45_01800	RY45_01800		RY45_01800	364038	364835	+	hypothetical protein		gene	gene359	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01800
RY45_01805	RY45_01805		RY45_01805	364931	365209	+	hypothetical protein		gene	gene360	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01805
RY45_01810	RY45_01810		RY45_01810	365265	367571	-	transcription accessory protein		gene	gene361	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01810
RY45_01815	RY45_01815	greB	greB	367841	368314	-	transcription elongation factor GreB	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus	gene	gene362	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01815
RY45_01820	RY45_01820	ompR	ompR	368551	369270	+	osmolarity response regulator	part of two-component system EnvZ/OmpR%3B regulates transcription of outer membrane porin genes ompC/F%3B under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation	gene	gene363	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01820
RY45_01825	RY45_01825		RY45_01825	369267	370577	+	histidine kinase		gene	gene364	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01825
RY45_01830	RY45_01830		RY45_01830	370613	371527	-	membrane protein		gene	gene365	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01830
RY45_01835	RY45_01835	rpsJ	rpsJ	371884	372195	+	30S ribosomal protein S10	NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex	gene	gene366	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01835
RY45_01840	RY45_01840		RY45_01840	372218	372850	+	50S ribosomal protein L3		gene	gene367	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01840
RY45_01845	RY45_01845	rplD	rplD	372868	373473	+	50S ribosomal protein L4	L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA	gene	gene368	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01845
RY45_01850	RY45_01850	rplW	rplW	373470	373772	+	50S ribosomal protein L23	binds third domain of 23S rRNA and protein L29%3B part of exit tunnel	gene	gene369	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01850
RY45_01855	RY45_01855		RY45_01855	373788	374609	+	50S ribosomal protein L2		gene	gene370	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01855
RY45_01860	RY45_01860		RY45_01860	374632	374910	+	30S ribosomal protein S19		gene	gene371	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01860
RY45_01865	RY45_01865		RY45_01865	374921	375265	+	50S ribosomal protein L22		gene	gene372	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01865
RY45_01870	RY45_01870		RY45_01870	375269	375982	+	30S ribosomal protein S3		gene	gene373	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01870
RY45_01875	RY45_01875		RY45_01875	375996	376409	+	50S ribosomal protein L16		gene	gene374	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01875
RY45_01880	RY45_01880		RY45_01880	376409	376600	+	50S ribosomal protein L29		gene	gene375	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01880
RY45_01885	RY45_01885		RY45_01885	376600	376848	+	30S ribosomal protein S17		gene	gene376	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01885
RY45_01890	RY45_01890		RY45_01890	376996	377364	+	50S ribosomal protein L14		gene	gene377	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01890
RY45_01895	RY45_01895	rplX	rplX	377376	377693	+	50S ribosomal protein L24	assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel	gene	gene378	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01895
RY45_01900	RY45_01900		RY45_01900	377707	378246	+	50S ribosomal protein L5		gene	gene379	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01900
RY45_01905	RY45_01905	rpsN	rpsN	378257	378562	+	30S ribosomal protein S14	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif	gene	gene380	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01905
RY45_01910	RY45_01910		RY45_01910	378584	378976	+	30S ribosomal protein S8		gene	gene381	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01910
RY45_01915	RY45_01915		RY45_01915	378990	379523	+	50S ribosomal protein L6		gene	gene382	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01915
RY45_01920	RY45_01920		RY45_01920	379533	379886	+	50S ribosomal protein L18		gene	gene383	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01920
RY45_01925	RY45_01925		RY45_01925	379901	380401	+	30S ribosomal protein S5		gene	gene384	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01925
RY45_01930	RY45_01930		RY45_01930	380590	381027	+	50S ribosomal protein L15		gene	gene385	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01930
RY45_01935	RY45_01935	secY	secY	381036	382364	+	preprotein translocase subunit SecY	forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase	gene	gene386	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01935
RY45_01940	RY45_01940		RY45_01940	382645	383001	+	30S ribosomal protein S13		gene	gene387	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01940
RY45_01945	RY45_01945		RY45_01945	383016	383405	+	30S ribosomal protein S11		gene	gene388	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01945
RY45_01950	RY45_01950		RY45_01950	383445	384065	+	30S ribosomal protein S4		gene	gene389	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01950
RY45_01955	RY45_01955		RY45_01955	384091	385080	+	DNA-directed RNA polymerase subunit alpha	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme	gene	gene390	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01955
RY45_01960	RY45_01960	rplQ	rplQ	385124	385507	+	50S ribosomal protein L17	is a component of the macrolide binding site in the peptidyl transferase center	gene	gene391	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01960
RY45_01965	RY45_01965	hypothetical protein	hypothetical protein	385611	385802	+		disrupted	pseudogene	gene392	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01965
RY45_01970	RY45_01970		RY45_01970	386355	387911	+	16S ribosomal RNA		rRNA	gene393	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01970
RY45_01975	RY45_01975		RY45_01975	388107	388182	+	tRNA-Glu		tRNA	gene394	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01975
RY45_01980	RY45_01980		RY45_01980	388413	391330	+	23S ribosomal RNA		rRNA	gene395	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01980
RY45_01985	RY45_01985		RY45_01985	391415	391529	+	5S ribosomal RNA		rRNA	gene396	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01985
RY45_01990	RY45_01990		RY45_01990	391628	391704	+	tRNA-Asp		tRNA	gene397	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01990
RY45_01995	RY45_01995		RY45_01995	392964	393950	-	hypothetical protein		gene	gene398	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_01995
RY45_02000	RY45_02000		RY45_02000	394254	394640	-	SirB family protein		gene	gene399	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02000
RY45_02005	RY45_02005		RY45_02005	394637	396493	-	potassium transporter		gene	gene400	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02005
RY45_02010	RY45_02010		RY45_02010	396564	397163	-	NAD(P)H oxidoreductase		gene	gene401	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02010
RY45_02015	RY45_02015		RY45_02015	397241	398083	-	LysR family transcriptional regulator		gene	gene402	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02015
RY45_02020	RY45_02020		RY45_02020	398227	398949	+	oxidoreductase		gene	gene403	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02020
RY45_02025	RY45_02025		RY45_02025	399037	399360	+	hypothetical protein		gene	gene404	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02025
RY45_02030	RY45_02030		RY45_02030	399410	399841	+	metal-binding protein		gene	gene405	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02030
RY45_02035	RY45_02035		RY45_02035	400066	402219	+	protease 2	PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues	gene	gene406	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02035
RY45_02040	RY45_02040		RY45_02040	402636	403607	+	C4-dicarboxylate ABC transporter substrate-binding protein		gene	gene407	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02040
RY45_02045	RY45_02045		RY45_02045	403710	406262	+	C4-dicarboxylate ABC transporter		gene	gene408	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02045
RY45_02050	RY45_02050		RY45_02050	406782	407408	+	membrane protein		gene	gene409	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02050
RY45_02055	RY45_02055		RY45_02055	407499	409052	-	DSBA oxidoreductase		gene	gene410	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02055
RY45_02060	RY45_02060		RY45_02060	409052	410104	-	hemolysin D		gene	gene411	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02060
RY45_02065	RY45_02065		RY45_02065	410201	411103	+	LysR family transcriptional regulator		gene	gene412	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02065
RY45_02070	RY45_02070		RY45_02070	411160	411474	+	hypothetical protein		gene	gene413	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02070
RY45_02075	RY45_02075		RY45_02075	411489	412772	-	sodium:dicarboxylate symporter		gene	gene414	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02075
RY45_02080	RY45_02080		RY45_02080	412981	413226	+	hypothetical protein		gene	gene415	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02080
RY45_02085	RY45_02085		RY45_02085	413329	413928	+	membrane protein		gene	gene416	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02085
RY45_02090	RY45_02090		RY45_02090	414032	415000	-	transcriptional regulator		gene	gene417	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02090
RY45_02095	RY45_02095		RY45_02095	415274	415435	+	preprotein translocase subunit TatA		gene	gene418	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02095
RY45_02100	RY45_02100		RY45_02100	415450	415752	+	hypothetical protein		gene	gene419	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02100
RY45_02105	RY45_02105		RY45_02105	415978	417402	+	lytic transglycosylase		gene	gene420	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02105
RY45_02110	RY45_02110		RY45_02110	417634	418887	+	phospholipase		gene	gene421	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02110
RY45_02115	RY45_02115		RY45_02115	419367	420485	-	acyl-CoA desaturase		gene	gene422	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02115
RY45_02120	RY45_02120		RY45_02120	420635	421255	+	transcriptional regulator	negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis	gene	gene423	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02120
RY45_02125	RY45_02125		RY45_02125	421264	421641	+	membrane protein		gene	gene424	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02125
RY45_02130	RY45_02130		RY45_02130	421680	421991	-	membrane protein		gene	gene425	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02130
RY45_02135	RY45_02135		RY45_02135	422230	422859	-	16S rRNA methyltransferase		gene	gene426	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02135
RY45_02140	RY45_02140		RY45_02140	422970	424763	+	cell division protein FtsY	cell division protein%3B signal recognition protein receptor%3B functions in the targeting and insertion of membrane proteins	gene	gene427	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02140
RY45_02145	RY45_02145		RY45_02145	424854	425522	+	cell division protein FtsE	ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions	gene	gene428	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02145
RY45_02150	RY45_02150		RY45_02150	425522	426475	+	cell division protein FtsX		gene	gene429	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02150
RY45_02155	RY45_02155		RY45_02155	426928	427782	+	RNA polymerase factor sigma-32		gene	gene430	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02155
RY45_02160	RY45_02160		RY45_02160	427909	428568	+	carbonate dehydratase		gene	gene431	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02160
RY45_02165	RY45_02165		RY45_02165	428580	429284	+	GntR family transcriptional regulator		gene	gene432	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02165
RY45_02170	RY45_02170		RY45_02170	429440	430675	+	imidazolonepropionase		gene	gene433	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02170
RY45_02175	RY45_02175		RY45_02175	430668	431612	+	formimidoylglutamase	catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate	gene	gene434	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02175
RY45_02180	RY45_02180		RY45_02180	431667	433376	+	urocanate hydratase	catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism	gene	gene435	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02180
RY45_02185	RY45_02185		RY45_02185	433381	434913	+	histidine ammonia-lyase	catalyzes the degradation of histidine to urocanate and ammmonia	gene	gene436	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02185
RY45_02190	RY45_02190		RY45_02190	435058	436155	-	calcium:proton antiporter		gene	gene437	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02190
RY45_02195	RY45_02195		RY45_02195	436329	437864	-	diguanylate phosphodiesterase		gene	gene438	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02195
RY45_02200	RY45_02200		RY45_02200	438401	440329	+	diguanylate phosphodiesterase		gene	gene439	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02200
RY45_02205	RY45_02205		RY45_02205	440404	441315	-	1-aminocyclopropane-1-carboxylate deaminase		gene	gene440	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02205
RY45_02210	RY45_02210		RY45_02210	441421	442284	+	MSHA biogenesis protein MshI		gene	gene441	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02210
RY45_02215	RY45_02215		RY45_02215	442284	442877	+	MSHA biogenesis protein MshI		gene	gene442	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02215
RY45_02220	RY45_02220		RY45_02220	442877	443524	+	MSHA biogenesis protein MshJ		gene	gene443	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02220
RY45_02225	RY45_02225		RY45_02225	443517	443843	+	MSHA biogenesis protein MshK		gene	gene444	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02225
RY45_02230	RY45_02230		RY45_02230	443914	445587	+	MSHA biogenesis protein MshL		gene	gene445	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02230
RY45_02235	RY45_02235		RY45_02235	445665	446555	+	ATPase AAA		gene	gene446	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02235
RY45_02240	RY45_02240		RY45_02240	446552	447649	+	hypothetical protein		gene	gene447	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02240
RY45_02245	RY45_02245		RY45_02245	447682	449391	+	MSHA biogenesis protein MshE		gene	gene448	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02245
RY45_02250	RY45_02250		RY45_02250	449445	450665	+	MSHA biogenesis protein MshG		gene	gene449	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02250
RY45_02255	RY45_02255		RY45_02255	450831	451292	+	hypothetical protein		gene	gene450	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02255
RY45_02260	RY45_02260		RY45_02260	451370	452041	+	MSHA biogenesis protein MshB		gene	gene451	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02260
RY45_02265	RY45_02265		RY45_02265	452056	452493	+	MSHA biogenesis protein MshA		gene	gene452	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02265
RY45_02270	RY45_02270		RY45_02270	452547	453044	+	MSHA biogenesis protein MshC		gene	gene453	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02270
RY45_02275	RY45_02275		RY45_02275	453031	453594	+	MSHA biogenesis protein MshD		gene	gene454	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02275
RY45_02280	RY45_02280		RY45_02280	453594	454415	+	MSHA biogenesis protein MshO		gene	gene455	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02280
RY45_02285	RY45_02285		RY45_02285	454405	454875	+	MSHA biogenesis protein MshP		gene	gene456	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02285
RY45_02290	RY45_02290		RY45_02290	454875	458591	+	MSHA biogenesis protein MshQ		gene	gene457	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02290
RY45_02295	RY45_02295		RY45_02295	458796	459836	+	rod shape-determining protein MreB		gene	gene458	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02295
RY45_02300	RY45_02300		RY45_02300	459879	460784	+	rod shape-determining protein MreC		gene	gene459	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02300
RY45_02305	RY45_02305		RY45_02305	460784	461269	+	rod shape-determining protein MreD		gene	gene460	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02305
RY45_02310	RY45_02310		RY45_02310	461321	461908	+	septum formation protein Maf		gene	gene461	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02310
RY45_02315	RY45_02315		RY45_02315	462095	463564	+	ribonuclease G	involved in the processing of the 5'end of 16S rRNA	gene	gene462	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02315
RY45_02320	RY45_02320		RY45_02320	463565	467464	+	hypothetical protein		gene	gene463	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02320
RY45_02325	RY45_02325		RY45_02325	467499	467819	+	stress protein		gene	gene464	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02325
RY45_02330	RY45_02330		RY45_02330	467848	468654	+	amidohydrolase		gene	gene465	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02330
RY45_02335	RY45_02335	tldD	tldD	468805	470253	+	protease TldD	responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA	gene	gene466	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02335
RY45_02340	RY45_02340		RY45_02340	470286	471146	+	XRE family transcriptional regulator		gene	gene467	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02340
RY45_02345	RY45_02345		RY45_02345	471233	471838	-	hypothetical protein		gene	gene468	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02345
RY45_02350	RY45_02350		RY45_02350	471888	472961	-	membrane protein		gene	gene469	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02350
RY45_02355	RY45_02355	murP	murP	473063	474517	-	PTS system N-acetylmuramic acid transporter subunits IIBC	belongs to PEP-dependent PTS system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel%3B requires crr-encoded enzyme IIA-glucose component	gene	gene470	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02355
RY45_02360	RY45_02360	murQ	murQ	474617	475513	-	N-acetylmuramic acid-6-phosphate etherase	catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway	gene	gene471	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02360
RY45_02365	RY45_02365		RY45_02365	475742	476704	-	transposase		gene	gene472	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02365
RY45_02370	RY45_02370		RY45_02370	476818	477021	-	hypothetical protein		gene	gene473	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02370
RY45_02375	RY45_02375		RY45_02375	477182	477898	-	MarC family membrane protein		gene	gene474	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02375
RY45_02380	RY45_02380		RY45_02380	478034	479350	-	MFS transporter		gene	gene475	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02380
RY45_02385	RY45_02385		RY45_02385	479599	480270	+	ATP-binding domain-containing protein		gene	gene476	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02385
RY45_02390	RY45_02390		RY45_02390	480267	481397	-	chemotaxis protein CheY		gene	gene477	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02390
RY45_02395	RY45_02395		RY45_02395	481408	484074	-	chemotaxis protein CheY		gene	gene478	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02395
RY45_02400	RY45_02400		RY45_02400	484075	485145	-	histidine kinase		gene	gene479	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02400
RY45_02405	RY45_02405		RY45_02405	485152	485526	-	anti-anti-sigma regulatory factor		gene	gene480	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02405
RY45_02410	RY45_02410		RY45_02410	485536	486756	-	chemotaxis protein		gene	gene481	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02410
RY45_02415	RY45_02415		RY45_02415	487018	487590	+	AraC family transcriptional regulator		gene	gene482	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02415
RY45_02420	RY45_02420		RY45_02420	487556	487975	-	hypothetical protein		gene	gene483	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02420
RY45_02425	RY45_02425		RY45_02425	488191	488901	+	hypothetical protein		gene	gene484	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02425
RY45_02430	RY45_02430		RY45_02430	488963	489808	-	hypothetical protein		gene	gene485	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02430
RY45_02435	RY45_02435		RY45_02435	489916	490179	-	hypothetical protein		gene	gene486	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02435
RY45_02440	RY45_02440		RY45_02440	490353	491174	+	hypothetical protein		gene	gene487	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02440
RY45_02445	RY45_02445		RY45_02445	491292	491813	+	GCN5 family acetyltransferase		gene	gene488	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02445
RY45_02450	RY45_02450		RY45_02450	492582	493859	-	sodium:proton antiporter		gene	gene489	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02450
RY45_02455	RY45_02455		RY45_02455	494063	497746	+	methionine synthase		gene	gene490	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02455
RY45_02460	RY45_02460		RY45_02460	497870	498286	+	hypothetical protein		gene	gene491	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02460
RY45_02465	RY45_02465		RY45_02465	498475	499371	+	ribosomal protein S6 modification protein	responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6	gene	gene492	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02465
RY45_02470	RY45_02470		RY45_02470	499771	501105	+	branched-chain amino acid ABC transporter substrate-binding protein	sodium:branched-chain amino acid symporter	gene	gene493	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02470
RY45_02475	RY45_02475		RY45_02475	501180	502391	-	histidine kinase		gene	gene494	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02475
RY45_02480	RY45_02480		RY45_02480	502435	503103	-	chemotaxis protein CheY		gene	gene495	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02480
RY45_02485	RY45_02485		RY45_02485	503194	503610	+	hypothetical protein		gene	gene496	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02485
RY45_02490	RY45_02490		RY45_02490	503696	504175	+	hypothetical protein		gene	gene497	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02490
RY45_02495	RY45_02495	aerolysin	aerolysin	504228	504783	+		disrupted	pseudogene	gene498	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02495
RY45_02500	RY45_02500		RY45_02500	504922	505335	+	membrane protein		gene	gene499	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02500
RY45_02505	RY45_02505		RY45_02505	505884	507038	+	hypothetical protein		gene	gene500	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02505
RY45_02510	RY45_02510		RY45_02510	507508	509499	+	thiamine biosynthesis protein ThiC	catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis	gene	gene501	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02510
RY45_02515	RY45_02515		RY45_02515	509496	511112	+	phosphomethylpyrimidine kinase		gene	gene502	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02515
RY45_02520	RY45_02520		RY45_02520	511175	511951	+	molybdopterin-synthase adenylyltransferase		gene	gene503	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02520
RY45_02525	RY45_02525		RY45_02525	511948	512154	+	thiamine biosynthesis protein ThiS		gene	gene504	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02525
RY45_02530	RY45_02530		RY45_02530	512240	513007	+	thiazole synthase		gene	gene505	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02530
RY45_02535	RY45_02535	thiH	thiH	513043	514275	+	thiamine biosynthesis protein ThiH	in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center	gene	gene506	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02535
RY45_02540	RY45_02540		RY45_02540	514841	515314	-	hypothetical protein		gene	gene507	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02540
RY45_02545	RY45_02545		RY45_02545	516626	517168	-	acetyltransferase		gene	gene508	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02545
RY45_02550	RY45_02550		RY45_02550	517507	518088	+	hypothetical protein		gene	gene509	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02550
RY45_02555	RY45_02555	hypothetical protein	hypothetical protein	518451	518720	-		disrupted	pseudogene	gene510	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02555
RY45_02560	RY45_02560		RY45_02560	519046	519459	-	GCN5 family acetyltransferase		gene	gene511	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02560
RY45_02565	RY45_02565		RY45_02565	519572	519889	-	hypothetical protein		gene	gene512	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02565
RY45_02570	RY45_02570		RY45_02570	520260	521165	+	diguanylate cyclase		gene	gene513	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02570
RY45_02575	RY45_02575		RY45_02575	521622	522896	+	serine/threonine protein kinase		gene	gene514	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02575
RY45_02580	RY45_02580		RY45_02580	522960	523598	-	protein exod		gene	gene515	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02580
RY45_02585	RY45_02585		RY45_02585	523849	524469	+	hypothetical protein		gene	gene516	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02585
RY45_02590	RY45_02590		RY45_02590	524475	524999	+	GNAT family acetyltransferase		gene	gene517	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02590
RY45_02595	RY45_02595		RY45_02595	524980	525285	-	monooxygenase		gene	gene518	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02595
RY45_02600	RY45_02600		RY45_02600	525407	525772	+	HxlR family transcriptional regulator		gene	gene519	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02600
RY45_02605	RY45_02605		RY45_02605	525769	526203	-	acetyltransferase		gene	gene520	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02605
RY45_02610	RY45_02610		RY45_02610	526329	526901	-	hypothetical protein		gene	gene521	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02610
RY45_02615	RY45_02615		RY45_02615	527031	528068	-	fucose 4-O-acetylase		gene	gene522	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02615
RY45_02620	RY45_02620		RY45_02620	528245	528865	-	peptidase		gene	gene523	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02620
RY45_02625	RY45_02625		RY45_02625	528931	530973	-	ligand-gated channel protein		gene	gene524	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02625
RY45_02630	RY45_02630		RY45_02630	531238	532113	-	hypothetical protein		gene	gene525	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02630
RY45_02635	RY45_02635		RY45_02635	532231	533295	-	porin		gene	gene526	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02635
RY45_02640	RY45_02640		RY45_02640	533515	534525	+	fructose 1%2C6-bisphosphatase		gene	gene527	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02640
RY45_02645	RY45_02645		RY45_02645	534694	534945	+	hypothetical protein		gene	gene528	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02645
RY45_02650	RY45_02650		RY45_02650	535100	536263	-	heme biosynthesis protein HemY		gene	gene529	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02650
RY45_02655	RY45_02655		RY45_02655	536274	537347	-	uroporphyrin-III methyltransferase		gene	gene530	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02655
RY45_02660	RY45_02660		RY45_02660	537344	538078	-	uroporphyrinogen III synthase		gene	gene531	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02660
RY45_02665	RY45_02665		RY45_02665	538075	539022	-	porphobilinogen deaminase		gene	gene532	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02665
RY45_02670	RY45_02670	cyaA	cyaA	539328	541862	+	adenylate cyclase	catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP	gene	gene533	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02670
RY45_02675	RY45_02675		RY45_02675	541986	542639	-	carboxylesterase		gene	gene534	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02675
RY45_02680	RY45_02680	cyaY	cyaY	542654	542968	-	frataxin-like protein	iron-dependent inhibitor of iron-sulfur cluster formation%3B iron-binding and oxidizing protein%3B defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease%3B based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly	gene	gene535	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02680
RY45_02685	RY45_02685		RY45_02685	543239	544489	+	diaminopimelate decarboxylase		gene	gene536	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02685
RY45_02690	RY45_02690	dapF	dapF	544555	545385	+	diaminopimelate epimerase	involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate	gene	gene537	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02690
RY45_02695	RY45_02695		RY45_02695	545466	546146	+	hypothetical protein		gene	gene538	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02695
RY45_02700	RY45_02700	xerC	xerC	546139	547116	+	site-specific tyrosine recombinase XerC	site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs	gene	gene539	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02700
RY45_02705	RY45_02705		RY45_02705	547157	547867	+	haloacid dehalogenase		gene	gene540	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02705
RY45_02710	RY45_02710		RY45_02710	547965	548366	-	hypothetical protein		gene	gene541	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02710
RY45_02715	RY45_02715		RY45_02715	548408	549934	-	mechanosensitive ion channel protein MscS		gene	gene542	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02715
RY45_02720	RY45_02720		RY45_02720	550050	550463	+	hypothetical protein		gene	gene543	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02720
RY45_02725	RY45_02725		RY45_02725	550471	551241	-	gamma-glutamyl-gamma-aminobutyrate hydrolase		gene	gene544	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02725
RY45_02730	RY45_02730		RY45_02730	551603	552412	-	HAD family hydrolase		gene	gene545	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02730
RY45_02735	RY45_02735		RY45_02735	552517	554187	-	hypothetical protein		gene	gene546	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02735
RY45_02740	RY45_02740		RY45_02740	554482	555447	+	membrane protein		gene	gene547	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02740
RY45_02745	RY45_02745		RY45_02745	555440	556369	+	ABC transporter ATP-binding protein		gene	gene548	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02745
RY45_02750	RY45_02750		RY45_02750	556366	556482	+	multidrug ABC transporter permease		gene	gene549	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02750
RY45_02755	RY45_02755		RY45_02755	556479	557573	+	ABC transporter		gene	gene550	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02755
RY45_02760	RY45_02760		RY45_02760	557609	558766	-	damage-inducible protein CinA		gene	gene551	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02760
RY45_02765	RY45_02765		RY45_02765	558824	560062	-	HD family phosphohydrolase		gene	gene552	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02765
RY45_02770	RY45_02770		RY45_02770	560207	561160	+	homoserine O-succinyltransferase	catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis	gene	gene553	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02770
RY45_02775	RY45_02775		RY45_02775	561169	561687	-	protein tyrosine phosphatase		gene	gene554	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02775
RY45_02780	RY45_02780		RY45_02780	561848	562318	+	ArsR family transcriptional regulator		gene	gene555	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02780
RY45_02785	RY45_02785		RY45_02785	562376	564340	-	hypothetical protein		gene	gene556	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02785
RY45_02790	RY45_02790		RY45_02790	564600	564857	+	hypothetical protein		gene	gene557	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02790
RY45_02795	RY45_02795		RY45_02795	565103	567070	+	ligand-gated channel protein		gene	gene558	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02795
RY45_02800	RY45_02800		RY45_02800	567194	568813	+	glycosidase		gene	gene559	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02800
RY45_02805	RY45_02805		RY45_02805	568868	569401	-	membrane protein		gene	gene560	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02805
RY45_02810	RY45_02810		RY45_02810	569426	570868	-	glutathione synthase		gene	gene561	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02810
RY45_02815	RY45_02815		RY45_02815	571055	571513	+	acetyltransferase		gene	gene562	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02815
RY45_02820	RY45_02820		RY45_02820	571528	571773	+	hypothetical protein		gene	gene563	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02820
RY45_02825	RY45_02825		RY45_02825	571830	572576	+	malonic semialdehyde reductase	NADP(+)-dependent%3B catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde%2C catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine%3B can also use 3-hydroxybutyrate%2C 3-hydroxy-isobutyrate%2C D-threonine%2C L-allo-threonine%2CD-serine	gene	gene564	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02825
RY45_02830	RY45_02830		RY45_02830	572638	574110	-	dipeptidase		gene	gene565	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02830
RY45_02835	RY45_02835		RY45_02835	574576	575028	+	hypothetical protein		gene	gene566	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02835
RY45_02840	RY45_02840		RY45_02840	575224	575805	-	hypothetical protein		gene	gene567	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02840
RY45_02845	RY45_02845	hypothetical protein	hypothetical protein	576000	576182	-		disrupted	pseudogene	gene568	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02845
RY45_02850	RY45_02850		RY45_02850	576179	576805	-	hypothetical protein		gene	gene569	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02850
RY45_02855	RY45_02855		RY45_02855	577219	578028	+	hypothetical protein		gene	gene570	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02855
RY45_02860	RY45_02860		RY45_02860	578338	578649	+	transposase		gene	gene571	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02860
RY45_02865	RY45_02865		RY45_02865	578898	579506	+	integrase		gene	gene572	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02865
RY45_02870	RY45_02870		RY45_02870	580113	580397	-	hypothetical protein		gene	gene573	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02870
RY45_02875	RY45_02875		RY45_02875	580402	581994	-	hypothetical protein		gene	gene574	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02875
RY45_02880	RY45_02880		RY45_02880	582429	582674	+	hypothetical protein		gene	gene575	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02880
RY45_02885	RY45_02885		RY45_02885	582675	582872	-	hypothetical protein		gene	gene576	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02885
RY45_02890	RY45_02890		RY45_02890	583236	583610	-	hypothetical protein		gene	gene577	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02890
RY45_02895	RY45_02895		RY45_02895	583673	583978	-	virulence protein		gene	gene578	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02895
RY45_02900	RY45_02900		RY45_02900	583989	584270	-	Killer protein		gene	gene579	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02900
RY45_02905	RY45_02905		RY45_02905	584595	585299	+	transposase		gene	gene580	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02905
RY45_02910	RY45_02910		RY45_02910	585751	586251	-	acetyltransferase		gene	gene581	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02910
RY45_02915	RY45_02915		RY45_02915	586379	587218	-	dihydropteroate synthase		gene	gene582	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02915
RY45_02920	RY45_02920		RY45_02920	587212	587559	-	ethidium bromide resistance protein		gene	gene583	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02920
RY45_02925	RY45_02925		RY45_02925	587723	588514	-	adenylyltransferase		gene	gene584	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02925
RY45_02930	RY45_02930		RY45_02930	588572	589204	-	chloramphenicol acetyltransferase		gene	gene585	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02930
RY45_02935	RY45_02935		RY45_02935	589463	589858	-	hypothetical protein		gene	gene586	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02935
RY45_02940	RY45_02940		RY45_02940	590223	590927	-	transposase		gene	gene587	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02940
RY45_02945	RY45_02945	XRE family transcriptional regulator	XRE family transcriptional regulator	591234	591773	-		disrupted	pseudogene	gene588	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02945
RY45_02950	RY45_02950		RY45_02950	591760	592419	-	tetracycline repressor protein TetR		gene	gene589	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02950
RY45_02955	RY45_02955		RY45_02955	592512	593702	+	MFS transporter		gene	gene590	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02955
RY45_02960	RY45_02960		RY45_02960	593758	593886	-	type VI secretion protein		gene	gene591	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02960
RY45_02965	RY45_02965		RY45_02965	594542	595183	-	lactamase		gene	gene592	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02965
RY45_02970	RY45_02970		RY45_02970	595423	596685	-	transposase		gene	gene593	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02970
RY45_02975	RY45_02975		RY45_02975	597030	598181	+	aldehyde reductase		gene	gene594	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02975
RY45_02980	RY45_02980		RY45_02980	598315	598944	-	glutathione S-transferase		gene	gene595	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02980
RY45_02985	RY45_02985		RY45_02985	599051	600319	-	O-acetylhomoserine aminocarboxypropyltransferase	catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol	gene	gene596	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02985
RY45_02990	RY45_02990		RY45_02990	600753	602486	+	ABC transporter substrate-binding protein		gene	gene597	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02990
RY45_02995	RY45_02995		RY45_02995	602522	602917	+	thioesterase		gene	gene598	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_02995
RY45_03000	RY45_03000		RY45_03000	602949	603662	+	hypothetical protein		gene	gene599	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03000
RY45_03005	RY45_03005		RY45_03005	603708	604463	-	lipase chaperone		gene	gene600	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03005
RY45_03010	RY45_03010		RY45_03010	604460	605371	-	lactonizing lipase		gene	gene601	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03010
RY45_03015	RY45_03015		RY45_03015	605662	606087	+	hypothetical protein		gene	gene602	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03015
RY45_03020	RY45_03020		RY45_03020	606109	606723	+	superoxide dismutase	SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals	gene	gene603	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03020
RY45_03025	RY45_03025		RY45_03025	606777	607715	-	lipoprotein		gene	gene604	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03025
RY45_03030	RY45_03030		RY45_03030	607882	610629	-	collagenase		gene	gene605	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03030
RY45_03035	RY45_03035		RY45_03035	611133	611456	-	fimbrial protein		gene	gene606	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03035
RY45_03040	RY45_03040		RY45_03040	612539	613054	+	fimbrial protein		gene	gene607	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03040
RY45_03045	RY45_03045		RY45_03045	613154	613543	+	hypothetical protein		gene	gene608	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03045
RY45_03050	RY45_03050		RY45_03050	613611	616145	+	fimbrial assembly protein		gene	gene609	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03050
RY45_03055	RY45_03055		RY45_03055	616156	616887	+	molecular chaperone		gene	gene610	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03055
RY45_03060	RY45_03060		RY45_03060	616892	617920	+	fimbrial protein		gene	gene611	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03060
RY45_03065	RY45_03065		RY45_03065	617932	618483	+	fimbrial protein		gene	gene612	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03065
RY45_03070	RY45_03070		RY45_03070	618486	619721	-	transcriptional regulator		gene	gene613	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03070
RY45_03075	RY45_03075		RY45_03075	620023	621429	-	O-succinylbenzoate--CoA ligase		gene	gene614	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03075
RY45_03080	RY45_03080		RY45_03080	621440	622369	-	O-succinylbenzoic acid synthetase		gene	gene615	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03080
RY45_03085	RY45_03085		RY45_03085	622369	623229	-	dihydroxynaphthoic acid synthetase	catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA	gene	gene616	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03085
RY45_03090	RY45_03090		RY45_03090	623222	623992	-	alpha/beta hydrolase		gene	gene617	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03090
RY45_03095	RY45_03095		RY45_03095	623982	625712	-	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase		gene	gene618	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03095
RY45_03100	RY45_03100		RY45_03100	625747	627093	-	isochorismate synthase		gene	gene619	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03100
RY45_03105	RY45_03105		RY45_03105	627301	628206	+	1%2C4-dihydroxy-2-naphthoate prenyltransferase		gene	gene620	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03105
RY45_03110	RY45_03110		RY45_03110	628313	628528	+	hypothetical protein		gene	gene621	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03110
RY45_03115	RY45_03115		RY45_03115	628608	630005	-	peptidase		gene	gene622	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03115
RY45_03120	RY45_03120		RY45_03120	630280	630675	+	hypothetical protein		gene	gene623	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03120
RY45_03125	RY45_03125		RY45_03125	630859	631149	-	Fe-S oxidoreductase		gene	gene624	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03125
RY45_03130	RY45_03130		RY45_03130	631222	632598	-	DEAD/DEAH box helicase		gene	gene625	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03130
RY45_03135	RY45_03135		RY45_03135	633163	634368	+	nucleoside permease		gene	gene626	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03135
RY45_03140	RY45_03140		RY45_03140	634461	634961	-	membrane protein		gene	gene627	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03140
RY45_03145	RY45_03145		RY45_03145	635054	635611	-	cytochrome B561		gene	gene628	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03145
RY45_03150	RY45_03150		RY45_03150	635660	635929	-	signal peptide protein		gene	gene629	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03150
RY45_03155	RY45_03155		RY45_03155	636051	636503	-	hypothetical protein		gene	gene630	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03155
RY45_03160	RY45_03160	zntB	zntB	636609	637601	+	zinc transporter		gene	gene631	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03160
RY45_03165	RY45_03165		RY45_03165	637611	638129	+	small-conductance mechanosensitive channel		gene	gene632	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03165
RY45_03170	RY45_03170		RY45_03170	638172	638420	-	hypothetical protein		gene	gene633	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03170
RY45_03175	RY45_03175		RY45_03175	638484	639059	-	molecular chaperone		gene	gene634	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03175
RY45_03180	RY45_03180		RY45_03180	639056	640843	-	sodium:proton exchanger		gene	gene635	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03180
RY45_03185	RY45_03185		RY45_03185	641020	641541	-	mannitol operon repressor		gene	gene636	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03185
RY45_03190	RY45_03190		RY45_03190	641656	642801	-	mannitol-1-phosphate 5-dehydrogenase		gene	gene637	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03190
RY45_03195	RY45_03195		RY45_03195	642839	644761	-	PTS system mannitol-specific transporter subunit IICBA	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate	gene	gene638	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03195
RY45_03200	RY45_03200		RY45_03200	645216	646262	-	transporter		gene	gene639	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03200
RY45_03205	RY45_03205		RY45_03205	646284	646877	-	TetR family transcriptional regulator		gene	gene640	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03205
RY45_03210	RY45_03210		RY45_03210	647064	649085	-	exoribonuclease II	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction	gene	gene641	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03210
RY45_03215	RY45_03215		RY45_03215	649186	650085	-	chromosome replication initiation inhibitor protein	specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport	gene	gene642	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03215
RY45_03220	RY45_03220		RY45_03220	650353	650976	-	acyl-homoserine-lactone synthase		gene	gene643	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03220
RY45_03225	RY45_03225		RY45_03225	651039	651821	+	transcriptional regulator		gene	gene644	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03225
RY45_03230	RY45_03230		RY45_03230	652035	652655	+	amino acid transporter		gene	gene645	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03230
RY45_03235	RY45_03235	cpdB	cpdB	652783	654762	+	2'%2C 3'-cyclic nucleotide 2'-phosphodiesterase	periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate	gene	gene646	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03235
RY45_03240	RY45_03240		RY45_03240	654828	655304	-	membrane protein		gene	gene647	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03240
RY45_03245	RY45_03245		RY45_03245	655442	655894	-	GCN5 family acetyltransferase		gene	gene648	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03245
RY45_03250	RY45_03250		RY45_03250	656015	656470	-	hypothetical protein		gene	gene649	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03250
RY45_03255	RY45_03255		RY45_03255	656524	658326	-	X-Pro aminopeptidase		gene	gene650	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03255
RY45_03260	RY45_03260		RY45_03260	658360	659025	-	GntR family transcriptional regulator		gene	gene651	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03260
RY45_03265	RY45_03265		RY45_03265	659201	660826	-	phosphoenolpyruvate carboxykinase	PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP	gene	gene652	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03265
RY45_03270	RY45_03270		RY45_03270	660976	661860	-	molecular chaperone Hsp33		gene	gene653	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03270
RY45_03275	RY45_03275		RY45_03275	661969	662367	-	ribosome-associated heat shock protein Hsp15		gene	gene654	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03275
RY45_03280	RY45_03280		RY45_03280	662585	663430	+	general secretion pathway protein GspC		gene	gene655	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03280
RY45_03285	RY45_03285		RY45_03285	663452	665485	+	general secretion pathway protein GspD		gene	gene656	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03285
RY45_03290	RY45_03290		RY45_03290	665485	666990	+	general secretion pathway protein GspE		gene	gene657	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03290
RY45_03295	RY45_03295		RY45_03295	666992	668212	+	general secretion pathway protein GspF		gene	gene658	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03295
RY45_03300	RY45_03300		RY45_03300	668474	668905	+	general secretion pathway protein GspG		gene	gene659	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03300
RY45_03305	RY45_03305		RY45_03305	669069	669620	+	general secretion pathway protein GspH		gene	gene660	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03305
RY45_03310	RY45_03310		RY45_03310	669617	669976	+	general secretion pathway protein GspI		gene	gene661	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03310
RY45_03315	RY45_03315		RY45_03315	669973	670620	+	general secretion pathway protein GspJ		gene	gene662	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03315
RY45_03320	RY45_03320		RY45_03320	670810	671823	+	type II secretion protein K		gene	gene663	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03320
RY45_03325	RY45_03325		RY45_03325	671925	673127	+	general secretion pathway protein GspL		gene	gene664	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03325
RY45_03330	RY45_03330		RY45_03330	673124	673615	+	type II secretion protein M		gene	gene665	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03330
RY45_03335	RY45_03335		RY45_03335	673677	674432	+	type II secretion protein N		gene	gene666	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03335
RY45_03340	RY45_03340		RY45_03340	674493	675308	-	LuxR family transcriptional regulator		gene	gene667	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03340
RY45_03345	RY45_03345		RY45_03345	675475	676743	+	tyrosyl-tRNA synthetase		gene	gene668	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03345
RY45_03350	RY45_03350		RY45_03350	676837	677505	-	HAD family hydrolase		gene	gene669	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03350
RY45_03355	RY45_03355		RY45_03355	677644	678252	+	ADP-ribose diphosphatase		gene	gene670	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03355
RY45_03360	RY45_03360		RY45_03360	678288	679100	+	3'-5'-bisphosphate nucleotidase		gene	gene671	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03360
RY45_03365	RY45_03365		RY45_03365	679513	680784	+	serine/threonine protein kinase		gene	gene672	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03365
RY45_03370	RY45_03370		RY45_03370	680857	681195	-	tRNA-binding protein		gene	gene673	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03370
RY45_03375	RY45_03375		RY45_03375	681280	682032	-	AraC family transcriptional regulator		gene	gene674	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03375
RY45_03380	RY45_03380		RY45_03380	682068	682391	-	Met repressor		gene	gene675	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03380
RY45_03385	RY45_03385		RY45_03385	682600	683763	+	cystathionine gamma-synthase	catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine	gene	gene676	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03385
RY45_03390	RY45_03390		RY45_03390	683763	686231	+	aspartate kinase		gene	gene677	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03390
RY45_03395	RY45_03395		RY45_03395	686869	689502	-	phosphoenolpyruvate carboxylase	catalyzes the formation of oxaloacetate from phosphoenolpyruvate	gene	gene678	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03395
RY45_03400	RY45_03400		RY45_03400	689718	690863	-	acetylornithine deacetylase	catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis	gene	gene679	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03400
RY45_03405	RY45_03405		RY45_03405	691132	692139	+	N-acetyl-gamma-glutamyl-phosphate reductase		gene	gene680	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03405
RY45_03410	RY45_03410		RY45_03410	692163	692942	+	acetylglutamate kinase		gene	gene681	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03410
RY45_03415	RY45_03415		RY45_03415	692968	693879	+	ornithine carbamoyltransferase	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation	gene	gene682	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03415
RY45_03420	RY45_03420		RY45_03420	693934	695169	+	argininosuccinate synthase		gene	gene683	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03420
RY45_03425	RY45_03425		RY45_03425	695594	696979	+	argininosuccinate lyase	catalyzes the formation of arginine from (N-L-arginino)succinate	gene	gene684	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03425
RY45_03430	RY45_03430	transcriptional regulator	transcriptional regulator	698091	698454	+		disrupted	pseudogene	gene685	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03430
RY45_03435	RY45_03435		RY45_03435	698528	698989	-	hypothetical protein		gene	gene686	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03435
RY45_03440	RY45_03440		RY45_03440	699190	699402	-	hypothetical protein		gene	gene687	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03440
RY45_03445	RY45_03445		RY45_03445	699511	699852	-	membrane protein		gene	gene688	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03445
RY45_03450	RY45_03450		RY45_03450	699849	700439	-	maltose acetyltransferase		gene	gene689	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03450
RY45_03455	RY45_03455		RY45_03455	700520	701782	-	MgtC/SapB transporter		gene	gene690	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03455
RY45_03460	RY45_03460		RY45_03460	701992	702993	+	sulfate transporter subunit		gene	gene691	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03460
RY45_03465	RY45_03465		RY45_03465	703050	703625	+	hypothetical protein		gene	gene692	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03465
RY45_03470	RY45_03470		RY45_03470	703878	704744	+	sulfate transporter		gene	gene693	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03470
RY45_03475	RY45_03475		RY45_03475	704741	705637	+	sulfate ABC transporter permease		gene	gene694	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03475
RY45_03480	RY45_03480		RY45_03480	705660	706727	+	sulfate ABC transporter ATP-binding protein		gene	gene695	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03480
RY45_03485	RY45_03485	cbl	cbl	706904	707851	+	transcriptional regulator Cbl	LysR-type transcriptional regulator similar to CysB%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates two operons consisting of ABC transporters that are part of the cys regulon%3B regulated by CysB%3B DNA-binding transcriptional activator for the ssuEADCB and tauABCD operons	gene	gene696	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03485
RY45_03490	RY45_03490		RY45_03490	707924	709348	-	N-acetylglucosamine-binding protein A	GbpA%3B plays a role mediating bacterial attachment and colonization of zooplankton and/or intestinal epithelium%3B in Vibrio cholerae this protein probably binds directly N-acetylglucosamine residues in chitin%2C glycoproteins and lipids on intestinal epithelial cells	gene	gene697	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03490
RY45_03495	RY45_03495		RY45_03495	709762	711459	-	chemotaxis protein		gene	gene698	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03495
RY45_03500	RY45_03500		RY45_03500	711754	713601	+	peptidase M3		gene	gene699	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03500
RY45_03505	RY45_03505		RY45_03505	713678	714469	+	hypothetical protein		gene	gene700	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03505
RY45_03510	RY45_03510		RY45_03510	714483	716678	-	hypothetical protein		gene	gene701	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03510
RY45_03515	RY45_03515		RY45_03515	717056	717673	+	hypothetical protein		gene	gene702	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03515
RY45_03520	RY45_03520		RY45_03520	717694	719037	+	hypothetical protein		gene	gene703	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03520
RY45_03525	RY45_03525		RY45_03525	719140	722310	-	peptidase S41		gene	gene704	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03525
RY45_03530	RY45_03530		RY45_03530	722571	723047	+	ErfK/YbiS/YcfS/YnhG family protein		gene	gene705	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03530
RY45_03535	RY45_03535		RY45_03535	723183	723902	+	branched-chain amino acid ABC transporter permease		gene	gene706	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03535
RY45_03540	RY45_03540		RY45_03540	723905	724246	+	hypothetical protein		gene	gene707	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03540
RY45_03545	RY45_03545		RY45_03545	724363	725889	+	hypothetical protein		gene	gene708	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03545
RY45_03550	RY45_03550		RY45_03550	725927	726778	+	hypothetical protein		gene	gene709	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03550
RY45_03555	RY45_03555		RY45_03555	726971	727294	+	hypothetical protein		gene	gene710	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03555
RY45_03560	RY45_03560		RY45_03560	727337	728260	-	LysR family transcriptional regulator		gene	gene711	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03560
RY45_03565	RY45_03565		RY45_03565	728321	729517	-	aromatic amino acid aminotransferase	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate	gene	gene712	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03565
RY45_03570	RY45_03570		RY45_03570	729687	729962	-	hypothetical protein		gene	gene713	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03570
RY45_03575	RY45_03575		RY45_03575	730034	730987	+	cation transporter		gene	gene714	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03575
RY45_03580	RY45_03580		RY45_03580	731051	731461	-	hypothetical protein		gene	gene715	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03580
RY45_03585	RY45_03585		RY45_03585	731692	735780	+	type II secretion protein		gene	gene716	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03585
RY45_03590	RY45_03590		RY45_03590	735973	738390	-	metal ABC transporter ATPase		gene	gene717	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03590
RY45_03595	RY45_03595	tpx	tpx	738608	739108	+	peroxidase	antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein	gene	gene718	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03595
RY45_03600	RY45_03600		RY45_03600	739176	739988	-	ABC transporter substrate-binding protein		gene	gene719	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03600
RY45_03605	RY45_03605		RY45_03605	740157	741377	+	DEAD/DEAH box helicase		gene	gene720	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03605
RY45_03610	RY45_03610		RY45_03610	741475	742980	+	metallophosphatase		gene	gene721	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03610
RY45_03615	RY45_03615		RY45_03615	743052	743840	-	hypothetical protein		gene	gene722	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03615
RY45_03620	RY45_03620		RY45_03620	743837	745153	-	endonuclease		gene	gene723	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03620
RY45_03625	RY45_03625		RY45_03625	745362	746921	-	chemotaxis protein		gene	gene724	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03625
RY45_03630	RY45_03630		RY45_03630	747161	747991	-	CAAX protease		gene	gene725	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03630
RY45_03635	RY45_03635		RY45_03635	748155	748445	-	hypothetical protein		gene	gene726	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03635
RY45_03640	RY45_03640		RY45_03640	748509	748883	-	hypothetical protein		gene	gene727	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03640
RY45_03645	RY45_03645		RY45_03645	749205	750320	+	XRE family transcriptional regulator		gene	gene728	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03645
RY45_03650	RY45_03650		RY45_03650	750440	751702	+	gluconate:proton symporter		gene	gene729	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03650
RY45_03655	RY45_03655		RY45_03655	751712	752845	+	glycerate kinase		gene	gene730	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03655
RY45_03660	RY45_03660		RY45_03660	753056	753619	+	hypothetical protein		gene	gene731	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03660
RY45_03665	RY45_03665		RY45_03665	753682	754215	+	glutathione peroxidase		gene	gene732	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03665
RY45_03670	RY45_03670		RY45_03670	754298	755233	+	LysR family transcriptional regulator		gene	gene733	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03670
RY45_03675	RY45_03675		RY45_03675	755416	756612	+	transporter		gene	gene734	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03675
RY45_03680	RY45_03680		RY45_03680	756958	757452	-	cysteine methyltransferase		gene	gene735	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03680
RY45_03685	RY45_03685		RY45_03685	757486	757902	-	peptidyl-tRNA hydrolase		gene	gene736	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03685
RY45_03690	RY45_03690		RY45_03690	758104	758442	+	nitrogen regulatory protein P-II 1	indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA	gene	gene737	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03690
RY45_03695	RY45_03695		RY45_03695	758647	759657	+	iron ABC transporter substrate-binding protein		gene	gene738	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03695
RY45_03700	RY45_03700		RY45_03700	759698	761323	+	iron ABC transporter permease		gene	gene739	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03700
RY45_03705	RY45_03705		RY45_03705	761393	762427	+	ABC transporter		gene	gene740	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03705
RY45_03710	RY45_03710		RY45_03710	762531	763436	+	peroxidase		gene	gene741	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03710
RY45_03715	RY45_03715		RY45_03715	763523	763993	-	arginine repressor	regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes	gene	gene742	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03715
RY45_03720	RY45_03720		RY45_03720	764195	764935	+	arginine ABC transporter ATP-binding protein		gene	gene743	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03720
RY45_03725	RY45_03725		RY45_03725	764961	765698	+	arginine ABC transporter substrate-binding protein		gene	gene744	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03725
RY45_03730	RY45_03730		RY45_03730	765702	766352	+	ABC transporter		gene	gene745	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03730
RY45_03735	RY45_03735	artM	artM	766355	767017	+	arginine transporter permease subunit ArtM	with ArtPQJI acts to transport arginine across the inner membrane	gene	gene746	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03735
RY45_03740	RY45_03740		RY45_03740	767239	768174	+	malate dehydrogenase	oxidizes malate to oxaloacetate	gene	gene747	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03740
RY45_03745	RY45_03745		RY45_03745	768220	768561	-	hypothetical protein		gene	gene748	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03745
RY45_03750	RY45_03750		RY45_03750	768611	769210	+	flagellar protein MotX		gene	gene749	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03750
RY45_03755	RY45_03755		RY45_03755	769313	770506	-	dihydropteridine reductase	flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine	gene	gene750	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03755
RY45_03760	RY45_03760		RY45_03760	770617	771084	+	transcriptional regulator		gene	gene751	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03760
RY45_03765	RY45_03765		RY45_03765	771118	772398	-	hypothetical protein		gene	gene752	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03765
RY45_03770	RY45_03770		RY45_03770	772439	773230	-	chromosome partitioning protein ParB		gene	gene753	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03770
RY45_03775	RY45_03775		RY45_03775	773505	774881	+	signal recognition particle		gene	gene754	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03775
RY45_03780	RY45_03780	rpsP	rpsP	775066	775314	+	30S ribosomal protein S16	binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity	gene	gene755	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03780
RY45_03785	RY45_03785	rimM	rimM	775339	775860	+	16S rRNA-processing protein RimM	Essential for efficient processing of 16S rRNA	gene	gene756	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03785
RY45_03790	RY45_03790	trmD	trmD	775895	776644	+	tRNA (guanine-N1)-methyltransferase	methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA	gene	gene757	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03790
RY45_03795	RY45_03795		RY45_03795	776677	777024	+	50S ribosomal protein L19		gene	gene758	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03795
RY45_03800	RY45_03800		RY45_03800	777128	777457	-	1%2C4-alpha-glucan branching protein		gene	gene759	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03800
RY45_03805	RY45_03805		RY45_03805	777540	778214	-	DNA mismatch repair protein MutH		gene	gene760	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03805
RY45_03810	RY45_03810		RY45_03810	778495	778710	-	hypothetical protein		gene	gene761	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03810
RY45_03815	RY45_03815		RY45_03815	778948	779475	+	RNA pyrophosphohydrolase		gene	gene762	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03815
RY45_03820	RY45_03820		RY45_03820	779490	781769	+	phosphoenolpyruvate-protein phosphotransferase		gene	gene763	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03820
RY45_03825	RY45_03825		RY45_03825	781837	782661	+	prolipoprotein diacylglyceryl transferase	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein	gene	gene764	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03825
RY45_03830	RY45_03830		RY45_03830	782661	783455	+	thymidylate synthase		gene	gene765	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03830
RY45_03835	RY45_03835	nhaA	nhaA	783682	784872	+	pH-dependent sodium/proton antiporter	exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH	gene	gene766	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03835
RY45_03840	RY45_03840		RY45_03840	784869	785276	+	hypothetical protein		gene	gene767	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03840
RY45_03845	RY45_03845	nhaR	nhaR	785263	786195	+	transcriptional regulator	Na+/H+ antiporter regulatory protein%3B activates the genes nhaA and osmC	gene	gene768	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03845
RY45_03850	RY45_03850		RY45_03850	786245	786547	+	transcriptional regulator		gene	gene769	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03850
RY45_03855	RY45_03855		RY45_03855	786598	786861	-	30S ribosomal protein S20		gene	gene770	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03855
RY45_03860	RY45_03860		RY45_03860	787053	788618	+	multidrug transporter MurJ		gene	gene771	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03860
RY45_03865	RY45_03865		RY45_03865	788760	789734	+	FMN adenylyltransferase		gene	gene772	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03865
RY45_03870	RY45_03870	ileS	ileS	789734	792595	+	isoleucine--tRNA ligase	IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme	gene	gene773	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03870
RY45_03875	RY45_03875		RY45_03875	792595	793098	+	lipoprotein signal peptidase		gene	gene774	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03875
RY45_03880	RY45_03880		RY45_03880	793095	793547	+	peptidylprolyl isomerase		gene	gene775	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03880
RY45_03885	RY45_03885	ispH	ispH	793547	794482	+	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway	gene	gene776	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03885
RY45_03890	RY45_03890		RY45_03890	794744	795247	+	type IV pilin		gene	gene777	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03890
RY45_03895	RY45_03895		RY45_03895	795244	795657	+	pilus assembly protein PilV		gene	gene778	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03895
RY45_03900	RY45_03900		RY45_03900	795654	796748	+	type IV pilin		gene	gene779	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03900
RY45_03905	RY45_03905		RY45_03905	796780	797235	+	hypothetical protein		gene	gene780	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03905
RY45_03910	RY45_03910		RY45_03910	797247	800600	+	pilus assembly protein		gene	gene781	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03910
RY45_03915	RY45_03915		RY45_03915	800609	801010	+	type IV pilin		gene	gene782	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03915
RY45_03920	RY45_03920		RY45_03920	801015	801401	-	type IV pilin		gene	gene783	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03920
RY45_03925	RY45_03925		RY45_03925	801496	802029	+	type IV pilin		gene	gene784	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03925
RY45_03930	RY45_03930		RY45_03930	802050	802637	+	type IV pilin		gene	gene785	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03930
RY45_03935	RY45_03935		RY45_03935	802642	803748	+	hypothetical protein		gene	gene786	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03935
RY45_03940	RY45_03940		RY45_03940	803757	805865	+	type IV pilin		gene	gene787	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03940
RY45_03945	RY45_03945		RY45_03945	805939	807561	+	NAD synthetase	NH(3)-dependent%3B catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers	gene	gene788	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03945
RY45_03950	RY45_03950		RY45_03950	807571	807909	+	nitrogen regulatory protein P-II 1	indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA	gene	gene789	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03950
RY45_03955	RY45_03955		RY45_03955	807962	808564	+	lipoprotein		gene	gene790	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03955
RY45_03960	RY45_03960		RY45_03960	808583	809092	+	S-ribosylhomocysteinase	catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2	gene	gene791	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03960
RY45_03965	RY45_03965		RY45_03965	809155	810177	-	diguanylate cyclase		gene	gene792	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03965
RY45_03970	RY45_03970		RY45_03970	810312	812705	+	exoribonuclease R	3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs	gene	gene793	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03970
RY45_03975	RY45_03975		RY45_03975	813527	814018	-	hypothetical protein		gene	gene794	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03975
RY45_03980	RY45_03980		RY45_03980	815651	816400	+	23S rRNA methyltransferase	Specifically methylates the ribose of guanosine 2251 in 23S rRNA	gene	gene795	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03980
RY45_03985	RY45_03985		RY45_03985	816411	816977	+	cAMP-binding protein		gene	gene796	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03985
RY45_03990	RY45_03990		RY45_03990	817035	817484	+	acyltransferase		gene	gene797	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03990
RY45_03995	RY45_03995		RY45_03995	817703	818563	+	membrane protein		gene	gene798	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_03995
RY45_04000	RY45_04000		RY45_04000	818684	819520	+	membrane protein		gene	gene799	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04000
RY45_04005	RY45_04005		RY45_04005	819554	820402	-	hypothetical protein		gene	gene800	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04005
RY45_04010	RY45_04010		RY45_04010	820510	821733	-	manganese transport protein MntH		gene	gene801	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04010
RY45_04015	RY45_04015	rpsF	rpsF	821971	822357	+	30S ribosomal protein S6	binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21	gene	gene802	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04015
RY45_04020	RY45_04020	rpsR	rpsR	822388	822618	+	30S ribosomal protein S18	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit	gene	gene803	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04020
RY45_04025	RY45_04025	rplI	rplI	822671	823117	+	50S ribosomal protein L9	in Escherichia coli this protein is wrapped around the base of the L1 stalk	gene	gene804	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04025
RY45_04030	RY45_04030		RY45_04030	823218	823958	+	ferredoxin-NADP reductase		gene	gene805	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04030
RY45_04035	RY45_04035		RY45_04035	824011	824340	-	hypothetical protein		gene	gene806	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04035
RY45_04040	RY45_04040		RY45_04040	824642	825640	+	Preprotein translocase subunit SecY		gene	gene807	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04040
RY45_04045	RY45_04045		RY45_04045	825902	826879	+	quinone oxidoreductase		gene	gene808	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04045
RY45_04050	RY45_04050		RY45_04050	826876	827313	+	hypothetical protein		gene	gene809	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04050
RY45_04055	RY45_04055		RY45_04055	827333	830146	+	peptidase M16		gene	gene810	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04055
RY45_04060	RY45_04060		RY45_04060	830207	831805	+	glutamate--cysteine ligase		gene	gene811	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04060
RY45_04065	RY45_04065		RY45_04065	832060	833274	+	thioredoxin		gene	gene812	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04065
RY45_04070	RY45_04070		RY45_04070	833357	835147	-	long-chain fatty acid--CoA ligase		gene	gene813	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04070
RY45_04075	RY45_04075		RY45_04075	835334	835879	+	hypothetical protein		gene	gene814	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04075
RY45_04080	RY45_04080		RY45_04080	835917	836366	-	alanine acetyltransferase		gene	gene815	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04080
RY45_04085	RY45_04085		RY45_04085	836417	836896	-	hypothetical protein		gene	gene816	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04085
RY45_04090	RY45_04090		RY45_04090	837135	838742	+	ATPase	interacts with LdcI%2C lysine decarboxylase%3B may be active in late log/ early stationary phase	gene	gene817	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04090
RY45_04095	RY45_04095		RY45_04095	838795	840249	+	vWA domain-containing protein		gene	gene818	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04095
RY45_04100	RY45_04100		RY45_04100	841630	843492	+	diguanylate cyclase		gene	gene819	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04100
RY45_04105	RY45_04105	prfC	prfC	843750	845336	+	peptide chain release factor 3	stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein	gene	gene820	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04105
RY45_04110	RY45_04110		RY45_04110	845504	845842	+	steroid delta-isomerase		gene	gene821	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04110
RY45_04115	RY45_04115		RY45_04115	845896	846390	-	MarR family transcriptional regulator		gene	gene822	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04115
RY45_04120	RY45_04120		RY45_04120	846453	846911	+	alkylhydroperoxidase		gene	gene823	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04120
RY45_04125	RY45_04125		RY45_04125	846969	847907	-	hypothetical protein		gene	gene824	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04125
RY45_04130	RY45_04130		RY45_04130	848114	849151	-	NADH:flavin oxidoreductase		gene	gene825	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04130
RY45_04135	RY45_04135		RY45_04135	849340	849906	+	TetR family transcriptional regulator		gene	gene826	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04135
RY45_04140	RY45_04140		RY45_04140	850038	850373	-	DNA (cytosine-5-)-methyltransferase		gene	gene827	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04140
RY45_04145	RY45_04145		RY45_04145	850686	851639	-	transcriptional regulator		gene	gene828	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04145
RY45_04150	RY45_04150		RY45_04150	851793	852890	+	agmatine deiminase	catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis	gene	gene829	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04150
RY45_04155	RY45_04155		RY45_04155	853045	854748	+	amidase	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia	gene	gene830	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04155
RY45_04160	RY45_04160		RY45_04160	854846	855307	-	hypothetical protein		gene	gene831	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04160
RY45_04165	RY45_04165		RY45_04165	855379	856320	-	hypothetical protein		gene	gene832	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04165
RY45_04170	RY45_04170		RY45_04170	858397	859158	+	beta-lactamase		gene	gene833	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04170
RY45_04175	RY45_04175		RY45_04175	859322	860614	+	membrane protein		gene	gene834	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04175
RY45_04180	RY45_04180		RY45_04180	860980	861321	-	hypothetical protein		gene	gene835	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04180
RY45_04185	RY45_04185		RY45_04185	861729	862976	-	DEAD/DEAH box helicase		gene	gene836	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04185
RY45_04190	RY45_04190		RY45_04190	863190	863840	-	lipoprotein		gene	gene837	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04190
RY45_04195	RY45_04195		RY45_04195	863837	864196	-	lipoprotein		gene	gene838	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04195
RY45_04200	RY45_04200		RY45_04200	864208	864879	-	membrane protein		gene	gene839	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04200
RY45_04205	RY45_04205		RY45_04205	865022	865891	-	LysR family transcriptional regulator		gene	gene840	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04205
RY45_04210	RY45_04210		RY45_04210	866111	867343	+	MFS transporter		gene	gene841	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04210
RY45_04215	RY45_04215		RY45_04215	867558	868013	-	hypothetical protein		gene	gene842	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04215
RY45_04220	RY45_04220		RY45_04220	868183	869091	+	DNA-directed RNA polymerase subunit delta		gene	gene843	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04220
RY45_04225	RY45_04225		RY45_04225	869284	872334	+	cytochrome C peroxidase		gene	gene844	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04225
RY45_04230	RY45_04230		RY45_04230	872404	872697	-	hypothetical protein		gene	gene845	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04230
RY45_04235	RY45_04235		RY45_04235	872843	873403	-	carbonate dehydratase		gene	gene846	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04235
RY45_04240	RY45_04240		RY45_04240	873634	874281	+	ribonuclease		gene	gene847	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04240
RY45_04245	RY45_04245		RY45_04245	874350	874634	+	Pathogenicity locus		gene	gene848	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04245
RY45_04250	RY45_04250		RY45_04250	874631	875692	+	2-nitropropane dioxygenase		gene	gene849	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04250
RY45_04255	RY45_04255		RY45_04255	875845	876033	-	hypothetical protein		gene	gene850	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04255
RY45_04260	RY45_04260		RY45_04260	876180	877737	+	16S ribosomal RNA		rRNA	gene851	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04260
RY45_04265	RY45_04265		RY45_04265	877933	878008	+	tRNA-Glu		tRNA	gene852	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04265
RY45_04270	RY45_04270		RY45_04270	878239	881156	+	23S ribosomal RNA		rRNA	gene853	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04270
RY45_04275	RY45_04275		RY45_04275	881241	881355	+	5S ribosomal RNA		rRNA	gene854	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04275
RY45_04280	RY45_04280		RY45_04280	881454	881530	+	tRNA-Asp		tRNA	gene855	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04280
RY45_04285	RY45_04285		RY45_04285	881710	882210	+	DNA mismatch repair protein MutT		gene	gene856	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04285
RY45_04290	RY45_04290		RY45_04290	882240	883523	-	histidine kinase		gene	gene857	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04290
RY45_04295	RY45_04295		RY45_04295	883520	884200	-	CpxR		gene	gene858	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04295
RY45_04300	RY45_04300		RY45_04300	884362	885522	+	hemolysin secretion protein D		gene	gene859	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04300
RY45_04305	RY45_04305		RY45_04305	885525	887471	+	macrolide transporter	with MacA is involved in the export of macrolide	gene	gene860	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04305
RY45_04310	RY45_04310		RY45_04310	887776	888612	-	glutamine ABC transporter substrate-binding protein		gene	gene861	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04310
RY45_04315	RY45_04315		RY45_04315	888609	889370	-	glutamine ABC transporter ATP-binding protein		gene	gene862	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04315
RY45_04320	RY45_04320		RY45_04320	889367	890029	-	glutamine ABC transporter permease		gene	gene863	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04320
RY45_04325	RY45_04325		RY45_04325	890104	890769	-	polar amino acid ABC transporter permease		gene	gene864	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04325
RY45_04330	RY45_04330		RY45_04330	890766	891977	-	threonine synthase	catalyzes the formation of L-threonine from O-phospho-L-homoserine	gene	gene865	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04330
RY45_04335	RY45_04335		RY45_04335	892213	894360	+	prolyl endopeptidase		gene	gene866	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04335
RY45_04340	RY45_04340		RY45_04340	894564	896723	+	cell envelope biogenesis protein AsmA		gene	gene867	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04340
RY45_04345	RY45_04345		RY45_04345	896899	897435	+	acetyltransferase		gene	gene868	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04345
RY45_04350	RY45_04350		RY45_04350	897491	898225	+	sugar dehydrogenase	Converts glucose to D-glucono-1%2C5 lactone	gene	gene869	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04350
RY45_04355	RY45_04355		RY45_04355	898276	901149	-	bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase	catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme	gene	gene870	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04355
RY45_04360	RY45_04360		RY45_04360	901280	901720	-	GNAT family acetyltransferase		gene	gene871	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04360
RY45_04365	RY45_04365		RY45_04365	901797	903047	-	chemotaxis protein		gene	gene872	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04365
RY45_04370	RY45_04370		RY45_04370	903148	903900	+	ion transporter		gene	gene873	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04370
RY45_04375	RY45_04375		RY45_04375	904053	904658	+	arylsulfatase		gene	gene874	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04375
RY45_04380	RY45_04380		RY45_04380	904928	908092	+	pyrroline-5-carboxylate dehydrogenase	proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain	gene	gene875	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04380
RY45_04385	RY45_04385	nudC	nudC	908293	909072	+	NADH pyrophosphatase	can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates	gene	gene876	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04385
RY45_04390	RY45_04390	hemE	hemE	909215	910284	+		disrupted	pseudogene	gene877	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04390
RY45_04395	RY45_04395		RY45_04395	910466	911395	+	ROK family transcriptional regulator		gene	gene878	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04395
RY45_04400	RY45_04400	gapA	gapA	911445	912455	+	glyceraldehyde-3-phosphate dehydrogenase	required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate	gene	gene879	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04400
RY45_04405	RY45_04405		RY45_04405	912518	913681	+	phosphoglycerate kinase		gene	gene880	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04405
RY45_04410	RY45_04410		RY45_04410	913798	914877	+	fructose-bisphosphate aldolase	catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate	gene	gene881	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04410
RY45_04415	RY45_04415	FAD-dependent oxidoreductase	FAD-dependent oxidoreductase	915089	916403	+		disrupted	pseudogene	gene882	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04415
RY45_04420	RY45_04420		RY45_04420	916586	916999	-	hypothetical protein		gene	gene883	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04420
RY45_04425	RY45_04425		RY45_04425	917124	918896	-	thiol:disulfide interchange protein DsbD		gene	gene884	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04425
RY45_04430	RY45_04430		RY45_04430	918893	919210	-	dihydroorotate dehydrogenase		gene	gene885	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04430
RY45_04435	RY45_04435		RY45_04435	919404	919745	+	hypothetical protein		gene	gene886	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04435
RY45_04440	RY45_04440		RY45_04440	919841	920278	-	membrane protein		gene	gene887	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04440
RY45_04445	RY45_04445		RY45_04445	920403	921281	+	LysR family transcriptional regulator		gene	gene888	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04445
RY45_04450	RY45_04450		RY45_04450	921295	922200	-	aminomethyltransferase		gene	gene889	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04450
RY45_04455	RY45_04455		RY45_04455	922314	922583	+	hypothetical protein		gene	gene890	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04455
RY45_04460	RY45_04460		RY45_04460	922603	922980	+	hypothetical protein		gene	gene891	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04460
RY45_04465	RY45_04465		RY45_04465	923051	924658	-	L-aspartate oxidase	catalyzes the formation of oxaloacetate from L-aspartate	gene	gene892	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04465
RY45_04470	RY45_04470		RY45_04470	924841	925422	+	RNA polymerase sigma factor RpoE	Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response	gene	gene893	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04470
RY45_04475	RY45_04475		RY45_04475	925445	926035	+	sigma-E factor negative regulatory protein		gene	gene894	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04475
RY45_04480	RY45_04480		RY45_04480	926055	927035	+	sigma-E factor regulatory protein RseB		gene	gene895	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04480
RY45_04485	RY45_04485		RY45_04485	927129	927590	+	sigma-E factor regulatory protein RseC		gene	gene896	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04485
RY45_04490	RY45_04490		RY45_04490	927711	929504	+	elongation factor 4		gene	gene897	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04490
RY45_04495	RY45_04495		RY45_04495	929508	930431	+	signal peptidase		gene	gene898	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04495
RY45_04500	RY45_04500	rnc	rnc	930432	931103	+	ribonuclease III	cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity	gene	gene899	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04500
RY45_04505	RY45_04505		RY45_04505	931100	931999	+	GTPase Era		gene	gene900	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04505
RY45_04510	RY45_04510		RY45_04510	932000	932707	+	DNA recombination protein RecO		gene	gene901	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04510
RY45_04515	RY45_04515		RY45_04515	932848	933585	+	pyridoxine 5'-phosphate synthase	involved in the de novo synthesis of pyridoxine (Vitamin B6)	gene	gene902	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04515
RY45_04520	RY45_04520		RY45_04520	933671	935581	-	enterotoxin		gene	gene903	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04520
RY45_04525	RY45_04525	kbaY	kbaY	935684	936538	-	tagatose-bisphosphate aldolase	catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY (also called AgaY)%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway	gene	gene904	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04525
RY45_04530	RY45_04530		RY45_04530	936529	937728	-	N-acetylglucosamine-6-phosphate deacetylase		gene	gene905	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04530
RY45_04535	RY45_04535		RY45_04535	937729	938163	-	PTS N-acetylgalactosamine transporter subunit IIA		gene	gene906	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04535
RY45_04540	RY45_04540		RY45_04540	938210	939088	-	PTS system N-acetylgalactosamine-specific transporter subunit IID	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IID with IIC forms the translocation channel%3B involved in N-acetylgalactosamine transport	gene	gene907	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04540
RY45_04545	RY45_04545		RY45_04545	939078	939854	-	PTS system N-acetylgalactosamine-specific transporter subunit IIC	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3Binvolved in N-acetylgalactosamine transport	gene	gene908	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04545
RY45_04550	RY45_04550		RY45_04550	939870	940343	-	PTS system N-acetylgalactosamine-specific transporter subunit IIB	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport	gene	gene909	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04550
RY45_04555	RY45_04555		RY45_04555	940343	941512	-	sugar isomerase		gene	gene910	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04555
RY45_04560	RY45_04560		RY45_04560	941525	942838	-	tagatose-bisphosphate aldolase	with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate%3B subunit Z may act as a chaperone for the Y subunit	gene	gene911	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04560
RY45_04565	RY45_04565		RY45_04565	943111	943908	+	transcriptional regulator	transcriptional repressor for the agaZVWA and agaSYBCDI operons	gene	gene912	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04565
RY45_04570	RY45_04570		RY45_04570	943978	944898	-	N-acetylmuramoyl-L-alanine amidase		gene	gene913	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04570
RY45_04575	RY45_04575		RY45_04575	944902	945381	-	hypothetical protein		gene	gene914	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04575
RY45_04580	RY45_04580		RY45_04580	945454	948165	-	histidine kinase		gene	gene915	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04580
RY45_04585	RY45_04585	rumA	rumA	948319	949641	+	23S rRNA methyltransferase	in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA%3B binds an iron-sulfur cluster [4Fe-4S]	gene	gene916	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04585
RY45_04590	RY45_04590	relA	relA	949908	952118	+	(p)ppGpp synthetase	(p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP	gene	gene917	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04590
RY45_04595	RY45_04595	mazG	mazG	952203	953000	+	nucleoside triphosphate hydrolase	functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era	gene	gene918	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04595
RY45_04600	RY45_04600	pyrG	pyrG	953142	954779	+	CTP synthetase	CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer	gene	gene919	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04600
RY45_04605	RY45_04605	eno	eno	954869	956170	+	enolase	catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis	gene	gene920	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04605
RY45_04610	RY45_04610		RY45_04610	956349	956666	+	cell division protein FtsB		gene	gene921	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04610
RY45_04615	RY45_04615		RY45_04615	956659	957390	+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase		gene	gene922	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04615
RY45_04620	RY45_04620	ispF	ispF	957387	957863	+	2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase	catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate	gene	gene923	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04620
RY45_04625	RY45_04625		RY45_04625	957863	958921	+	pseudouridine synthase		gene	gene924	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04625
RY45_04630	RY45_04630		RY45_04630	958902	959648	+	stationary phase survival protein SurE		gene	gene925	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04630
RY45_04635	RY45_04635	pcm	pcm	959653	960270	+	protein-L-isoaspartate O-methyltransferase	catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins	gene	gene926	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04635
RY45_04640	RY45_04640		RY45_04640	960267	960848	+	membrane protein		gene	gene927	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04640
RY45_04645	RY45_04645		RY45_04645	960859	961899	+	peptidoglycan-binding protein		gene	gene928	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04645
RY45_04650	RY45_04650		RY45_04650	961947	962930	+	RNA polymerase sigma factor RpoS	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses	gene	gene929	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04650
RY45_04655	RY45_04655		RY45_04655	963016	964029	-	UGMP family protein	universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis	gene	gene930	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04655
RY45_04660	RY45_04660		RY45_04660	964440	964883	+	glutamyl-tRNA amidotransferase		gene	gene931	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04660
RY45_04665	RY45_04665	dnaG	dnaG	964972	966759	+	DNA primase	synthesizes RNA primers at the replication forks	gene	gene932	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04665
RY45_04670	RY45_04670		RY45_04670	966982	968838	+	RNA polymerase subunit sigma-70		gene	gene933	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04670
RY45_04675	RY45_04675		RY45_04675	969033	969109	+	tRNA-Met		tRNA	gene934	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04675
RY45_04680	RY45_04680		RY45_04680	969242	969490	+	hypothetical protein		gene	gene935	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04680
RY45_04685	RY45_04685		RY45_04685	969541	972117	-	alpha-amlyase		gene	gene936	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04685
RY45_04690	RY45_04690		RY45_04690	972393	972947	-	cytochrome B		gene	gene937	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04690
RY45_04695	RY45_04695		RY45_04695	972928	973302	-	hypothetical protein		gene	gene938	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04695
RY45_04700	RY45_04700		RY45_04700	973566	974855	-	phosphoribosylamine--glycine ligase	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis	gene	gene939	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04700
RY45_04705	RY45_04705	purH	purH	974966	976558	-	phosphoribosylaminoimidazolecarboxamide formyltransferase	involved in de novo purine biosynthesis	gene	gene940	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04705
RY45_04710	RY45_04710	zntR	zntR	976970	977407	+	zinc-responsive transcriptional regulator	mediates expression of the zinc export protein ZntA in response to high levels of zinc%3B member of MerR family of transcriptional regulators	gene	gene941	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04710
RY45_04715	RY45_04715		RY45_04715	977397	977933	+	deaminase		gene	gene942	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04715
RY45_04720	RY45_04720		RY45_04720	978063	978281	+	hypothetical protein		gene	gene943	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04720
RY45_04725	RY45_04725		RY45_04725	978398	979543	-	coproporphyrinogen III oxidase		gene	gene944	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04725
RY45_04730	RY45_04730		RY45_04730	979678	980274	-	nucleoside-triphosphate diphosphatase		gene	gene945	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04730
RY45_04735	RY45_04735		RY45_04735	980497	981660	+	MFS transporter		gene	gene946	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04735
RY45_04740	RY45_04740		RY45_04740	981769	982818	+	oxidoreductase		gene	gene947	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04740
RY45_04745	RY45_04745		RY45_04745	983128	983373	+	hypothetical protein		gene	gene948	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04745
RY45_04750	RY45_04750		RY45_04750	983475	984026	-	alanine acetyltransferase		gene	gene949	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04750
RY45_04755	RY45_04755		RY45_04755	984026	984580	-	50S ribosomal protein L7/L12		gene	gene950	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04755
RY45_04760	RY45_04760		RY45_04760	984932	986701	+	hemagglutinin		gene	gene951	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04760
RY45_04765	RY45_04765		RY45_04765	986754	987653	-	transcriptional regulator		gene	gene952	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04765
RY45_04770	RY45_04770		RY45_04770	987862	989055	+	multidrug resistance protein MdtH	Confers resistance to norfloxacin and enoxacin	gene	gene953	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04770
RY45_04775	RY45_04775		RY45_04775	989120	990244	-	porin		gene	gene954	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04775
RY45_04780	RY45_04780		RY45_04780	990445	991764	-	C4-dicarboxylate ABC transporter		gene	gene955	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04780
RY45_04785	RY45_04785	aspA	aspA	991892	993334	-	aspartate ammonia-lyase	catalyzes the formation of fumarate from aspartate	gene	gene956	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04785
RY45_04790	RY45_04790		RY45_04790	993706	994260	+	FxsA protein		gene	gene957	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04790
RY45_04795	RY45_04795		RY45_04795	994284	995684	-	multidrug transporter MatE		gene	gene958	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04795
RY45_04800	RY45_04800	groES	groES	995867	996160	+	molecular chaperone GroES	10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring	gene	gene959	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04800
RY45_04805	RY45_04805	groEL	groEL	996202	997836	+	molecular chaperone GroEL	60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth	gene	gene960	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04805
RY45_04810	RY45_04810		RY45_04810	997932	998429	+	molybdopterin-binding oxidoreductase		gene	gene961	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04810
RY45_04815	RY45_04815		RY45_04815	998453	1000384	+	diguanylate phosphodiesterase		gene	gene962	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04815
RY45_04820	RY45_04820		RY45_04820	1000705	1001361	-	pseudouridine synthase		gene	gene963	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04820
RY45_04825	RY45_04825		RY45_04825	1001475	1004342	-	ATP-dependent helicase	transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA	gene	gene964	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04825
RY45_04830	RY45_04830		RY45_04830	1004911	1006465	+	16S ribosomal RNA		rRNA	gene965	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04830
RY45_04835	RY45_04835		RY45_04835	1006531	1006607	+	tRNA-Ile		tRNA	gene966	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04835
RY45_04840	RY45_04840		RY45_04840	1006618	1006693	+	tRNA-Ala		tRNA	gene967	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04840
RY45_04845	RY45_04845		RY45_04845	1006926	1009840	+	23S ribosomal RNA		rRNA	gene968	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04845
RY45_04850	RY45_04850		RY45_04850	1009945	1010059	+	5S ribosomal RNA		rRNA	gene969	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04850
RY45_04855	RY45_04855		RY45_04855	1010348	1010800	+	pullulanase		gene	gene970	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04855
RY45_04860	RY45_04860		RY45_04860	1011009	1013156	+	NrdJa		gene	gene971	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04860
RY45_04865	RY45_04865		RY45_04865	1013167	1013847	+	NrdJb		gene	gene972	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04865
RY45_04870	RY45_04870		RY45_04870	1014056	1015426	+	ATPase		gene	gene973	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04870
RY45_04875	RY45_04875		RY45_04875	1015495	1016208	-	thiamine ABC transporter ATP-binding protein		gene	gene974	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04875
RY45_04880	RY45_04880	thiP	thiP	1016274	1017896	-	thiamine ABC transporter permease	permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine	gene	gene975	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04880
RY45_04885	RY45_04885	tbpA	tbpA	1017893	1018873	-	thiamine ABC transporter substrate-binding protein	part of the thiamine and TPP transport system tbpA-thiPQ	gene	gene976	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04885
RY45_04890	RY45_04890		RY45_04890	1019107	1019397	+	pilus assembly protein PilZ		gene	gene977	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04890
RY45_04895	RY45_04895		RY45_04895	1019500	1020429	-	hypothetical protein		gene	gene978	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04895
RY45_04900	RY45_04900	leuD	leuD	1020546	1021145	-	isopropylmalate isomerase	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D	gene	gene979	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04900
RY45_04905	RY45_04905		RY45_04905	1021158	1022555	-	isopropylmalate isomerase	dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate	gene	gene980	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04905
RY45_04910	RY45_04910		RY45_04910	1022588	1023673	-	3-isopropylmalate dehydrogenase		gene	gene981	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04910
RY45_04915	RY45_04915		RY45_04915	1023676	1025250	-	2-isopropylmalate synthase		gene	gene982	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04915
RY45_04920	RY45_04920		RY45_04920	1025658	1026281	+	TetR family transcriptional regulator		gene	gene983	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04920
RY45_04925	RY45_04925		RY45_04925	1026407	1026907	+	Type II phosphatidic acid phosphatase		gene	gene984	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04925
RY45_04930	RY45_04930		RY45_04930	1026907	1028016	+	glycosyltransferase		gene	gene985	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04930
RY45_04935	RY45_04935		RY45_04935	1028595	1030313	+	acetolactate synthase 3 catalytic subunit	catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive	gene	gene986	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04935
RY45_04940	RY45_04940	ilvH	ilvH	1030405	1030899	+	acetolactate synthase 3 regulatory subunit	with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit	gene	gene987	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04940
RY45_04945	RY45_04945		RY45_04945	1031304	1033475	-	phosphate acetyltransferase	catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate	gene	gene988	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04945
RY45_04950	RY45_04950		RY45_04950	1033527	1034729	-	acetate kinase	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate	gene	gene989	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04950
RY45_04955	RY45_04955		RY45_04955	1035032	1035472	+	hypothetical protein		gene	gene990	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04955
RY45_04960	RY45_04960		RY45_04960	1035528	1036028	-	hypothetical protein		gene	gene991	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04960
RY45_04965	RY45_04965		RY45_04965	1036441	1036905	-	bacterioferritin comigratory protein		gene	gene992	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04965
RY45_04970	RY45_04970		RY45_04970	1036927	1037460	-	glycine cleavage system regulatory protein		gene	gene993	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04970
RY45_04975	RY45_04975		RY45_04975	1037744	1038631	+	dihydrodipicolinate synthase		gene	gene994	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04975
RY45_04980	RY45_04980		RY45_04980	1038654	1039748	+	lipoprotein		gene	gene995	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04980
RY45_04985	RY45_04985		RY45_04985	1039814	1040917	+	phosphoribosylaminoimidazole-succinocarboxamide synthase	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase	gene	gene996	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04985
RY45_04990	RY45_04990		RY45_04990	1041060	1041662	-	short-chain dehydrogenase		gene	gene997	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04990
RY45_04995	RY45_04995		RY45_04995	1041761	1042660	+	LysR family transcriptional regulator		gene	gene998	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_04995
RY45_05000	RY45_05000		RY45_05000	1042733	1043374	+	hypothetical protein		gene	gene999	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05000
RY45_05005	RY45_05005		RY45_05005	1043447	1043884	+	histidine triad (HIT) protein		gene	gene1000	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05005
RY45_05010	RY45_05010		RY45_05010	1043983	1044681	+	chemotaxis protein CheX		gene	gene1001	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05010
RY45_05015	RY45_05015		RY45_05015	1044750	1045748	-	hypothetical protein		gene	gene1002	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05015
RY45_05020	RY45_05020		RY45_05020	1045956	1048268	+	ATPase		gene	gene1003	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05020
RY45_05025	RY45_05025		RY45_05025	1048297	1049652	+	deoxyguanosinetriphosphate triphosphohydrolase		gene	gene1004	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05025
RY45_05030	RY45_05030		RY45_05030	1049975	1050178	+	hypothetical protein		gene	gene1005	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05030
RY45_05035	RY45_05035		RY45_05035	1050327	1054604	+	histidine kinase		gene	gene1006	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05035
RY45_05040	RY45_05040		RY45_05040	1054585	1055796	+	diguanylate phosphodiesterase		gene	gene1007	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05040
RY45_05045	RY45_05045		RY45_05045	1055835	1057811	+	chemotaxis protein		gene	gene1008	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05045
RY45_05050	RY45_05050		RY45_05050	1057896	1058396	-	transcriptional regulator		gene	gene1009	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05050
RY45_05055	RY45_05055	metQ	metQ	1058493	1059293	-	DL-methionine transporter substrate-binding subunit		gene	gene1010	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05055
RY45_05060	RY45_05060		RY45_05060	1059319	1059972	-	methionine ABC transporter permease		gene	gene1011	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05060
RY45_05065	RY45_05065	metN	metN	1059953	1060996	-	DL-methionine transporter ATP-binding subunit	part of the metNIQ transport system for methionine	gene	gene1012	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05065
RY45_05070	RY45_05070		RY45_05070	1061294	1061518	-	hypothetical protein		gene	gene1013	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05070
RY45_05075	RY45_05075		RY45_05075	1061468	1061923	+	hypothetical protein		gene	gene1014	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05075
RY45_05080	RY45_05080		RY45_05080	1062036	1062794	-	polyphosphate glucokinase		gene	gene1015	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05080
RY45_05085	RY45_05085		RY45_05085	1062878	1064005	-	[Fe-S]-binding protein		gene	gene1016	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05085
RY45_05090	RY45_05090		RY45_05090	1064180	1065691	+	hypothetical protein		gene	gene1017	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05090
RY45_05095	RY45_05095		RY45_05095	1065700	1066173	+	DNA-binding protein		gene	gene1018	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05095
RY45_05100	RY45_05100		RY45_05100	1066164	1067729	+	N-acetylmuramoyl-L-alanine amidase		gene	gene1019	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05100
RY45_05105	RY45_05105		RY45_05105	1067960	1069828	+	DNA mismatch repair protein MutL		gene	gene1020	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05105
RY45_05110	RY45_05110		RY45_05110	1069943	1070839	+	tRNA dimethylallyltransferase		gene	gene1021	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05110
RY45_05115	RY45_05115		RY45_05115	1070910	1071173	+	RNA-binding protein Hfq		gene	gene1022	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05115
RY45_05120	RY45_05120		RY45_05120	1071237	1072523	+	GTPase HflX	involved in modulation of proteins HflK and HflC%3B part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein	gene	gene1023	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05120
RY45_05125	RY45_05125		RY45_05125	1072615	1073766	+	membrane protease HflK		gene	gene1024	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05125
RY45_05130	RY45_05130		RY45_05130	1073770	1074654	+	protein HflC		gene	gene1025	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05130
RY45_05135	RY45_05135		RY45_05135	1074766	1074954	+	membrane protein		gene	gene1026	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05135
RY45_05140	RY45_05140		RY45_05140	1075041	1076012	-	octaprenyl diphosphate synthase		gene	gene1027	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05140
RY45_05145	RY45_05145	hypothetical protein	hypothetical protein	1076222	1076521	-		disrupted	pseudogene	gene1028	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05145
RY45_05150	RY45_05150	rpmA	rpmA	1076584	1076841	+	50S ribosomal protein L27	involved in the peptidyltransferase reaction during translation	gene	gene1029	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05150
RY45_05155	RY45_05155	obgE	obgE	1077032	1078234	+	GTPase CgtA	ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication	gene	gene1030	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05155
RY45_05160	RY45_05160		RY45_05160	1078628	1079998	+	membrane protein		gene	gene1031	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05160
RY45_05165	RY45_05165		RY45_05165	1080169	1081863	+	AMP-binding protein		gene	gene1032	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05165
RY45_05170	RY45_05170		RY45_05170	1081906	1082259	-	hypothetical protein		gene	gene1033	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05170
RY45_05175	RY45_05175		RY45_05175	1082329	1082679	-	hypothetical protein		gene	gene1034	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05175
RY45_05180	RY45_05180		RY45_05180	1082812	1085700	-	phosphodiesterase		gene	gene1035	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05180
RY45_05185	RY45_05185		RY45_05185	1085940	1086929	+	hypothetical protein		gene	gene1036	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05185
RY45_05190	RY45_05190		RY45_05190	1087162	1087662	+	XRE family transcriptional regulator		gene	gene1037	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05190
RY45_05195	RY45_05195		RY45_05195	1087863	1088372	+	hypothetical protein		gene	gene1038	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05195
RY45_05200	RY45_05200		RY45_05200	1088497	1089318	-	bis(5'-nucleosyl)-tetraphosphatase		gene	gene1039	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05200
RY45_05205	RY45_05205		RY45_05205	1089325	1089687	-	protein ApaG		gene	gene1040	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05205
RY45_05210	RY45_05210		RY45_05210	1089692	1090519	-	ribosomal RNA small subunit methyltransferase A		gene	gene1041	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05210
RY45_05215	RY45_05215		RY45_05215	1090509	1091504	-	4-hydroxythreonine-4-phosphate dehydrogenase		gene	gene1042	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05215
RY45_05220	RY45_05220		RY45_05220	1091504	1092802	-	peptidylprolyl isomerase	Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB	gene	gene1043	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05220
RY45_05225	RY45_05225		RY45_05225	1092833	1095265	-	LPS biosynthesis protein		gene	gene1044	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05225
RY45_05230	RY45_05230		RY45_05230	1095440	1096450	+	aminoglycoside phosphotransferase		gene	gene1045	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05230
RY45_05235	RY45_05235		RY45_05235	1096447	1097115	+	mannose-1-phosphate guanylyltransferase		gene	gene1046	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05235
RY45_05240	RY45_05240		RY45_05240	1097135	1097965	+	molecular chaperone DnaJ		gene	gene1047	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05240
RY45_05245	RY45_05245		RY45_05245	1098052	1099395	-	adenine permease PurP	involved in the transport or adenine	gene	gene1048	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05245
RY45_05250	RY45_05250		RY45_05250	1099660	1099992	-	hypothetical protein		gene	gene1049	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05250
RY45_05255	RY45_05255		RY45_05255	1100225	1101892	-	ABC transporter ATP-binding protein	ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence	gene	gene1050	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05255
RY45_05260	RY45_05260		RY45_05260	1102133	1102708	+	cyclic nucleotide-binding protein		gene	gene1051	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05260
RY45_05265	RY45_05265		RY45_05265	1102766	1103275	+	membrane protein		gene	gene1052	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05265
RY45_05270	RY45_05270		RY45_05270	1103366	1104202	-	5'-methylthioadenosine nucleosidase		gene	gene1053	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05270
RY45_05275	RY45_05275		RY45_05275	1104310	1105164	-	lytic transglycosylase		gene	gene1054	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05275
RY45_05280	RY45_05280		RY45_05280	1105349	1105630	-	hypothetical protein		gene	gene1055	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05280
RY45_05285	RY45_05285		RY45_05285	1105718	1105906	-	hypothetical protein		gene	gene1056	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05285
RY45_05290	RY45_05290		RY45_05290	1106062	1107000	-	LysR family transcriptional regulator		gene	gene1057	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05290
RY45_05295	RY45_05295		RY45_05295	1107331	1108158	+	purine nucleoside phosphorylase		gene	gene1058	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05295
RY45_05300	RY45_05300		RY45_05300	1108184	1109443	+	nucleoside transporter NupC		gene	gene1059	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05300
RY45_05305	RY45_05305		RY45_05305	1109566	1110309	+	deoxyribose-phosphate aldolase	catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate	gene	gene1060	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05305
RY45_05310	RY45_05310		RY45_05310	1110408	1111277	+	multidrug DMT transporter		gene	gene1061	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05310
RY45_05315	RY45_05315		RY45_05315	1111283	1112296	-	protein CapI		gene	gene1062	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05315
RY45_05320	RY45_05320		RY45_05320	1112618	1113244	+	membrane protein		gene	gene1063	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05320
RY45_05325	RY45_05325		RY45_05325	1113357	1114145	-	hemin ABC transporter ATP-binding protein		gene	gene1064	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05325
RY45_05330	RY45_05330		RY45_05330	1114160	1115191	-	iron ABC transporter permease		gene	gene1065	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05330
RY45_05335	RY45_05335		RY45_05335	1115188	1116027	-	hemin receptor		gene	gene1066	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05335
RY45_05340	RY45_05340		RY45_05340	1116196	1116708	+	HuvX protein		gene	gene1067	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05340
RY45_05345	RY45_05345		RY45_05345	1116705	1117262	+	HugZ protein		gene	gene1068	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05345
RY45_05350	RY45_05350		RY45_05350	1117333	1117737	-	lipoprotein		gene	gene1069	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05350
RY45_05355	RY45_05355		RY45_05355	1117777	1118328	-	isochorismatase		gene	gene1070	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05355
RY45_05360	RY45_05360		RY45_05360	1118389	1119357	-	iron-regulated protein		gene	gene1071	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05360
RY45_05365	RY45_05365		RY45_05365	1119546	1121639	+	ligand-gated channel protein		gene	gene1072	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05365
RY45_05370	RY45_05370		RY45_05370	1121928	1123067	+	MFS transporter		gene	gene1073	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05370
RY45_05375	RY45_05375		RY45_05375	1123173	1123382	-	Cro/Cl family transcriptional regulator		gene	gene1074	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05375
RY45_05380	RY45_05380		RY45_05380	1123390	1124001	-	hypothetical protein		gene	gene1075	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05380
RY45_05385	RY45_05385		RY45_05385	1124221	1127721	+	histidine kinase		gene	gene1076	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05385
RY45_05390	RY45_05390		RY45_05390	1128094	1130703	+	glycoside hydrolase		gene	gene1077	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05390
RY45_05395	RY45_05395		RY45_05395	1130776	1133154	+	peptidase M66		gene	gene1078	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05395
RY45_05400	RY45_05400		RY45_05400	1133259	1135160	+	chitinase		gene	gene1079	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05400
RY45_05405	RY45_05405		RY45_05405	1135221	1136021	-	SAM-dependent methyltransferase		gene	gene1080	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05405
RY45_05410	RY45_05410		RY45_05410	1136148	1136786	-	Crp/Fnr family transcriptional regulator	cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons	gene	gene1081	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05410
RY45_05415	RY45_05415		RY45_05415	1137098	1137502	+	hypothetical protein		gene	gene1082	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05415
RY45_05420	RY45_05420		RY45_05420	1137552	1137848	+	hypothetical protein		gene	gene1083	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05420
RY45_05425	RY45_05425		RY45_05425	1137906	1138436	-	lipoprotein		gene	gene1084	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05425
RY45_05430	RY45_05430		RY45_05430	1138452	1139321	-	phosphoribulokinase		gene	gene1085	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05430
RY45_05435	RY45_05435		RY45_05435	1139497	1139943	-	4-amino-4-deoxy-L-arabinose-phospho-UDP flippase		gene	gene1086	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05435
RY45_05440	RY45_05440		RY45_05440	1139940	1140284	-	4-amino-4-deoxy-L-arabinose-phospho-UDP flippase		gene	gene1087	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05440
RY45_05445	RY45_05445	arnT	arnT	1140284	1141927	-	4-amino-4-deoxy-L-arabinose transferase	catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A	gene	gene1088	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05445
RY45_05450	RY45_05450		RY45_05450	1141997	1142896	-	4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase	catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol	gene	gene1089	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05450
RY45_05455	RY45_05455		RY45_05455	1142889	1144880	-	UDP-4-amino-4-deoxy-L-arabinose formyltransferase	Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains	gene	gene1090	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05455
RY45_05460	RY45_05460		RY45_05460	1144877	1145857	-	UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase	catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate	gene	gene1091	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05460
RY45_05465	RY45_05465		RY45_05465	1145864	1147000	-	UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase	catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose	gene	gene1092	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05465
RY45_05470	RY45_05470		RY45_05470	1147224	1148570	+	UDP-glucose 6-dehydrogenase		gene	gene1093	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05470
RY45_05475	RY45_05475		RY45_05475	1149000	1149242	-	hypothetical protein		gene	gene1094	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05475
RY45_05480	RY45_05480		RY45_05480	1149332	1150486	+	diguanylate cyclase		gene	gene1095	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05480
RY45_05485	RY45_05485		RY45_05485	1150468	1151451	-	alpha/beta hydrolase		gene	gene1096	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05485
RY45_05490	RY45_05490		RY45_05490	1151519	1152418	-	chemotaxis protein CheW		gene	gene1097	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05490
RY45_05495	RY45_05495		RY45_05495	1152600	1153286	-	hypothetical protein		gene	gene1098	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05495
RY45_05500	RY45_05500		RY45_05500	1153326	1153532	+	DNA-binding protein		gene	gene1099	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05500
RY45_05505	RY45_05505		RY45_05505	1153678	1154316	+	peptidylprolyl isomerase		gene	gene1100	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05505
RY45_05510	RY45_05510		RY45_05510	1154381	1154596	-	lysis protein	phi X174 lysis protein%3B required for phi X174 lysis	gene	gene1101	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05510
RY45_05515	RY45_05515		RY45_05515	1154611	1155579	-	vegetatible incompatibility protein HET-E-1		gene	gene1102	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05515
RY45_05520	RY45_05520		RY45_05520	1155699	1156505	+	peptidylprolyl isomerase		gene	gene1103	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05520
RY45_05525	RY45_05525		RY45_05525	1156657	1158063	+	ATPase AAA		gene	gene1104	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05525
RY45_05530	RY45_05530		RY45_05530	1158153	1159022	-	hypothetical protein		gene	gene1105	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05530
RY45_05535	RY45_05535		RY45_05535	1159136	1159471	-	hypothetical protein		gene	gene1106	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05535
RY45_05540	RY45_05540		RY45_05540	1159598	1159939	-	membrane protein		gene	gene1107	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05540
RY45_05545	RY45_05545		RY45_05545	1160026	1161864	-	5'-nucleotidase		gene	gene1108	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05545
RY45_05550	RY45_05550		RY45_05550	1162097	1163638	-	diguanylate phosphodiesterase		gene	gene1109	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05550
RY45_05555	RY45_05555		RY45_05555	1163817	1164671	-	preprotein translocase subunit Tim44		gene	gene1110	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05555
RY45_05560	RY45_05560		RY45_05560	1165104	1166498	+	DNA helicase	unwinds double stranded DNA	gene	gene1111	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05560
RY45_05565	RY45_05565	alr	alr	1166808	1167881	+	alanine racemase	converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer	gene	gene1112	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05565
RY45_05570	RY45_05570		RY45_05570	1167995	1168243	-	ferredoxin		gene	gene1113	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05570
RY45_05575	RY45_05575		RY45_05575	1168245	1169606	-	protease		gene	gene1114	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05575
RY45_05580	RY45_05580		RY45_05580	1169840	1170577	-	diguanylate phosphodiesterase		gene	gene1115	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05580
RY45_05585	RY45_05585		RY45_05585	1170814	1171536	+	hypothetical protein		gene	gene1116	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05585
RY45_05590	RY45_05590		RY45_05590	1171567	1172058	+	adhesin		gene	gene1117	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05590
RY45_05595	RY45_05595		RY45_05595	1172127	1174571	+	hypothetical protein		gene	gene1118	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05595
RY45_05600	RY45_05600		RY45_05600	1175806	1176444	-	capsular biosynthesis protein		gene	gene1119	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05600
RY45_05605	RY45_05605		RY45_05605	1176568	1179996	+	chemotaxis protein CheY		gene	gene1120	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05605
RY45_05610	RY45_05610		RY45_05610	1179958	1180251	-	hypothetical protein		gene	gene1121	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05610
RY45_05615	RY45_05615		RY45_05615	1180386	1180470	-	tRNA-Tyr		tRNA	gene1122	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05615
RY45_05620	RY45_05620		RY45_05620	1180502	1180586	-	tRNA-Tyr		tRNA	gene1123	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05620
RY45_05625	RY45_05625		RY45_05625	1180618	1180702	-	tRNA-Tyr		tRNA	gene1124	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05625
RY45_05630	RY45_05630		RY45_05630	1181038	1182270	+	cysteine desulfurase		gene	gene1125	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05630
RY45_05635	RY45_05635		RY45_05635	1182317	1183378	-	chemotaxis protein CheY		gene	gene1126	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05635
RY45_05640	RY45_05640		RY45_05640	1183389	1183859	-	chemotaxis protein CheD	catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors	gene	gene1127	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05640
RY45_05645	RY45_05645		RY45_05645	1183870	1184673	-	SAM-dependent methyltransferase		gene	gene1128	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05645
RY45_05650	RY45_05650		RY45_05650	1184730	1186898	-	chemotaxis protein		gene	gene1129	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05650
RY45_05655	RY45_05655		RY45_05655	1186974	1187546	-	chemotaxis protein CheW		gene	gene1130	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05655
RY45_05660	RY45_05660		RY45_05660	1187559	1189481	-	chemotaxis protein		gene	gene1131	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05660
RY45_05665	RY45_05665		RY45_05665	1189497	1191710	-	chemotaxis protein CheA		gene	gene1132	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05665
RY45_05670	RY45_05670		RY45_05670	1191737	1192063	-	anti-sigma B factor antagonist		gene	gene1133	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05670
RY45_05675	RY45_05675		RY45_05675	1192078	1192446	-	chemotaxis protein CheY		gene	gene1134	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05675
RY45_05680	RY45_05680		RY45_05680	1192456	1193670	-	chemotaxis protein		gene	gene1135	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05680
RY45_05685	RY45_05685		RY45_05685	1193974	1195062	-	3-oxoacyl-ACP synthase	FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs%3B in Pseudomonas this protein is involved in quinolone signal biosynthesis	gene	gene1136	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05685
RY45_05690	RY45_05690		RY45_05690	1195266	1196207	+	LysR family transcriptional regulator		gene	gene1137	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05690
RY45_05695	RY45_05695		RY45_05695	1196336	1196944	+	amino acid transporter LysE		gene	gene1138	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05695
RY45_05700	RY45_05700		RY45_05700	1197047	1198906	+	protease		gene	gene1139	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05700
RY45_05705	RY45_05705	RNA-binding protein	RNA-binding protein	1199134	1199478	+		disrupted	pseudogene	gene1140	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05705
RY45_05710	RY45_05710		RY45_05710	1199612	1199857	+	hypothetical protein		gene	gene1141	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05710
RY45_05715	RY45_05715		RY45_05715	1200088	1200462	-	cupin		gene	gene1142	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05715
RY45_05720	RY45_05720		RY45_05720	1200850	1201326	-	cysteine methyltransferase		gene	gene1143	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05720
RY45_05725	RY45_05725		RY45_05725	1201323	1202888	-	AraC family transcriptional regulator		gene	gene1144	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05725
RY45_05730	RY45_05730		RY45_05730	1203098	1203499	+	hypothetical protein		gene	gene1145	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05730
RY45_05735	RY45_05735		RY45_05735	1203569	1205047	-	peptidase M32		gene	gene1146	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05735
RY45_05740	RY45_05740		RY45_05740	1205181	1205762	-	DNA mismatch repair protein MutS		gene	gene1147	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05740
RY45_05745	RY45_05745		RY45_05745	1206234	1207127	-	polysaccharide biosynthesis protein GumN		gene	gene1148	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05745
RY45_05750	RY45_05750		RY45_05750	1207215	1207547	+	hypothetical protein		gene	gene1149	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05750
RY45_05755	RY45_05755		RY45_05755	1207705	1208532	-	oxidoreductase		gene	gene1150	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05755
RY45_05760	RY45_05760		RY45_05760	1208652	1210097	-	porin		gene	gene1151	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05760
RY45_05765	RY45_05765		RY45_05765	1210606	1212543	-	chemotaxis protein		gene	gene1152	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05765
RY45_05770	RY45_05770		RY45_05770	1212663	1213559	-	permease		gene	gene1153	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05770
RY45_05775	RY45_05775		RY45_05775	1213689	1214519	-	rhamnulose-1-phosphate aldolase		gene	gene1154	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05775
RY45_05780	RY45_05780		RY45_05780	1214732	1215883	-	alcohol dehydrogenase		gene	gene1155	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05780
RY45_05785	RY45_05785		RY45_05785	1215998	1216279	+	hypothetical protein		gene	gene1156	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05785
RY45_05790	RY45_05790		RY45_05790	1216487	1216903	+	hypothetical protein		gene	gene1157	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05790
RY45_05795	RY45_05795		RY45_05795	1217118	1218602	+	rhamnulokinase		gene	gene1158	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05795
RY45_05800	RY45_05800		RY45_05800	1218599	1219858	+	sugar isomerase	catalyzes the formation of L-rhamnulose from L-rhamnose	gene	gene1159	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05800
RY45_05805	RY45_05805		RY45_05805	1219992	1221020	+	rhamnose:proton symporter	transports L-rhamnose and L-lyxose into the cell	gene	gene1160	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05805
RY45_05810	RY45_05810		RY45_05810	1221032	1221346	+	L-rhamnose mutarotase		gene	gene1161	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05810
RY45_05815	RY45_05815		RY45_05815	1221420	1221496	-	tRNA-Arg		tRNA	gene1162	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05815
RY45_05820	RY45_05820		RY45_05820	1221547	1222701	-	hypothetical protein		gene	gene1163	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05820
RY45_05825	RY45_05825		RY45_05825	1222896	1223516	+	hypothetical protein		gene	gene1164	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05825
RY45_05830	RY45_05830		RY45_05830	1223532	1223963	+	hypothetical protein		gene	gene1165	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05830
RY45_05835	RY45_05835	pheA	pheA	1224064	1225236	-	chorismate mutase	catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis	gene	gene1166	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05835
RY45_05840	RY45_05840		RY45_05840	1225579	1226178	+	haloacid dehalogenase		gene	gene1167	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05840
RY45_05845	RY45_05845		RY45_05845	1226204	1226482	+	hypothetical protein		gene	gene1168	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05845
RY45_05850	RY45_05850		RY45_05850	1226528	1227400	+	hypothetical protein		gene	gene1169	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05850
RY45_05855	RY45_05855		RY45_05855	1227496	1228044	+	hypothetical protein		gene	gene1170	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05855
RY45_05860	RY45_05860		RY45_05860	1228228	1228857	+	autotransporter		gene	gene1171	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05860
RY45_05865	RY45_05865		RY45_05865	1229030	1229974	+	membrane protein		gene	gene1172	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05865
RY45_05870	RY45_05870		RY45_05870	1230038	1230925	+	MerR family transcriptional regulator		gene	gene1173	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05870
RY45_05875	RY45_05875		RY45_05875	1230922	1232343	+	deoxyribodipyrimidine photolyase	UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent	gene	gene1174	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05875
RY45_05880	RY45_05880		RY45_05880	1232345	1232773	+	transcriptional regulator		gene	gene1175	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05880
RY45_05885	RY45_05885		RY45_05885	1232770	1233507	+	short-chain dehydrogenase		gene	gene1176	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05885
RY45_05890	RY45_05890		RY45_05890	1233504	1234763	+	FAD-dependent oxidoreductase		gene	gene1177	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05890
RY45_05895	RY45_05895		RY45_05895	1234760	1235542	+	plasmid partition ParA protein		gene	gene1178	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05895
RY45_05900	RY45_05900		RY45_05900	1235542	1236798	+	cyclopropane-fatty-acyl-phospholipid synthase		gene	gene1179	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05900
RY45_05905	RY45_05905		RY45_05905	1236801	1237280	+	hypothetical protein		gene	gene1180	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05905
RY45_05910	RY45_05910		RY45_05910	1237277	1237495	+	hypothetical protein		gene	gene1181	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05910
RY45_05915	RY45_05915		RY45_05915	1237512	1238003	+	hypothetical protein		gene	gene1182	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05915
RY45_05920	RY45_05920		RY45_05920	1238003	1238560	+	lipoprotein		gene	gene1183	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05920
RY45_05925	RY45_05925		RY45_05925	1238685	1239152	+	DNA polymerase sliding clamp subunit		gene	gene1184	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05925
RY45_05930	RY45_05930		RY45_05930	1239358	1241007	+	hydroxylamine reductase	has hydroxylamine reductase activity%2C catalyzes the reduction of hydroxylamine to ammonia and water	gene	gene1185	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05930
RY45_05935	RY45_05935		RY45_05935	1241122	1242141	+	(Fe-S)-binding protein		gene	gene1186	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05935
RY45_05940	RY45_05940		RY45_05940	1242226	1243251	+	UDP-galactose-4-epimerase		gene	gene1187	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05940
RY45_05945	RY45_05945		RY45_05945	1243426	1244175	-	membrane protein		gene	gene1188	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05945
RY45_05950	RY45_05950		RY45_05950	1244374	1244461	+	tRNA-Ser		tRNA	gene1189	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05950
RY45_05955	RY45_05955		RY45_05955	1244905	1246533	+	hypothetical protein		gene	gene1190	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05955
RY45_05960	RY45_05960		RY45_05960	1246547	1248313	+	hypothetical protein		gene	gene1191	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05960
RY45_05965	RY45_05965		RY45_05965	1248274	1254207	+	hypothetical protein		gene	gene1192	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05965
RY45_05970	RY45_05970		RY45_05970	1254888	1259096	+	hypothetical protein		gene	gene1193	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05970
RY45_05975	RY45_05975		RY45_05975	1260577	1260771	+	hypothetical protein		gene	gene1194	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05975
RY45_05980	RY45_05980		RY45_05980	1261206	1261511	-	hypothetical protein		gene	gene1195	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05980
RY45_05985	RY45_05985		RY45_05985	1262811	1263041	+	hypothetical protein		gene	gene1196	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05985
RY45_05990	RY45_05990		RY45_05990	1263498	1263800	+	hypothetical protein		gene	gene1197	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05990
RY45_05995	RY45_05995	hypothetical protein	hypothetical protein	1263928	1265583	+		disrupted	pseudogene	gene1198	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_05995
RY45_06000	RY45_06000		RY45_06000	1266473	1266757	-	hypothetical protein		gene	gene1199	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06000
RY45_06005	RY45_06005		RY45_06005	1267055	1267825	+	transcriptional regulator		gene	gene1200	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06005
RY45_06010	RY45_06010		RY45_06010	1268056	1268574	+	major exported protein		gene	gene1201	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06010
RY45_06015	RY45_06015		RY45_06015	1269059	1271104	+	type IV secretion protein Rhs		gene	gene1202	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06015
RY45_06020	RY45_06020		RY45_06020	1271104	1271973	+	hypothetical protein		gene	gene1203	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06020
RY45_06025	RY45_06025		RY45_06025	1271970	1275152	+	hypothetical protein		gene	gene1204	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06025
RY45_06030	RY45_06030	hypothetical protein	hypothetical protein	1275434	1275655	+		disrupted	pseudogene	gene1205	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06030
RY45_06035	RY45_06035	hypothetical protein	hypothetical protein	1276225	1276722	+		disrupted	pseudogene	gene1206	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06035
RY45_06040	RY45_06040		RY45_06040	1277180	1278061	-	transcriptional regulator		gene	gene1207	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06040
RY45_06045	RY45_06045		RY45_06045	1278171	1278950	+	alpha-acetolactate decarboxylase		gene	gene1208	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06045
RY45_06050	RY45_06050		RY45_06050	1278978	1280648	+	acetolactate synthase	catalyzes the formation of 2-acetolactate from pyruvate in stationary phase	gene	gene1209	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06050
RY45_06055	RY45_06055		RY45_06055	1280749	1281324	-	oxidative-stress-resistance chaperone		gene	gene1210	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06055
RY45_06060	RY45_06060		RY45_06060	1281358	1282305	-	2-dehydropantoate 2-reductase		gene	gene1211	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06060
RY45_06065	RY45_06065		RY45_06065	1282663	1283145	+	nucleotide-binding protein	nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription	gene	gene1212	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06065
RY45_06070	RY45_06070		RY45_06070	1283248	1284090	-	membrane protein		gene	gene1213	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06070
RY45_06075	RY45_06075		RY45_06075	1284247	1285626	-	MFS transporter		gene	gene1214	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06075
RY45_06080	RY45_06080		RY45_06080	1285712	1286041	-	hypothetical protein		gene	gene1215	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06080
RY45_06085	RY45_06085		RY45_06085	1286158	1286709	-	peptidylprolyl isomerase		gene	gene1216	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06085
RY45_06090	RY45_06090		RY45_06090	1286725	1287297	-	lipoprotein		gene	gene1217	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06090
RY45_06095	RY45_06095		RY45_06095	1287322	1288464	-	23S rRNA methyltransferase		gene	gene1218	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06095
RY45_06100	RY45_06100		RY45_06100	1288671	1288979	+	BolA family transcriptional regulator		gene	gene1219	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06100
RY45_06105	RY45_06105		RY45_06105	1289421	1290764	+	Na(+)-translocating NADH-quinone reductase subunit A	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm	gene	gene1220	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06105
RY45_06110	RY45_06110		RY45_06110	1290768	1291997	+	Na(+)-translocating NADH-quinone reductase subunit B	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm	gene	gene1221	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06110
RY45_06115	RY45_06115		RY45_06115	1291987	1292775	+	Na(+)-translocating NADH-quinone reductase subunit C	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm	gene	gene1222	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06115
RY45_06120	RY45_06120		RY45_06120	1292768	1293400	+	Na(+)-translocating NADH-quinone reductase subunit D	Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm	gene	gene1223	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06120
RY45_06125	RY45_06125		RY45_06125	1293404	1294000	+	Na(+)-translocating NADH-quinone reductase subunit E	Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.	gene	gene1224	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06125
RY45_06130	RY45_06130		RY45_06130	1294018	1295241	+	Na(+)-translocating NADH-quinone reductase subunit F	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm	gene	gene1225	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06130
RY45_06135	RY45_06135		RY45_06135	1295245	1296285	+	thiamine biosynthesis lipoprotein		gene	gene1226	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06135
RY45_06140	RY45_06140		RY45_06140	1296297	1296521	+	Na(+)-translocating NADH-quinone reductase subunit E		gene	gene1227	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06140
RY45_06145	RY45_06145		RY45_06145	1296610	1296822	-	hypothetical protein		gene	gene1228	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06145
RY45_06150	RY45_06150		RY45_06150	1296955	1298007	+	DNA polymerase IV	involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function	gene	gene1229	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06150
RY45_06155	RY45_06155		RY45_06155	1298076	1300217	+	chemotaxis protein		gene	gene1230	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06155
RY45_06160	RY45_06160		RY45_06160	1300501	1301421	+	transcriptional regulator	Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence	gene	gene1231	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06160
RY45_06165	RY45_06165		RY45_06165	1301414	1302052	+	alpha/beta hydrolase		gene	gene1232	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06165
RY45_06170	RY45_06170		RY45_06170	1302085	1302471	+	membrane protein		gene	gene1233	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06170
RY45_06175	RY45_06175		RY45_06175	1302464	1303558	+	23S rRNA methyltransferase		gene	gene1234	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06175
RY45_06180	RY45_06180		RY45_06180	1303629	1304069	-	hypothetical protein		gene	gene1235	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06180
RY45_06185	RY45_06185		RY45_06185	1304191	1305198	-	isocitrate dehydrogenase	catalyzes the formation of 2-oxoglutarate from isocitrate	gene	gene1236	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06185
RY45_06190	RY45_06190		RY45_06190	1305345	1306148	-	protein Xni		gene	gene1237	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06190
RY45_06195	RY45_06195		RY45_06195	1306279	1307634	-	LOG family protein		gene	gene1238	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06195
RY45_06200	RY45_06200		RY45_06200	1307785	1309404	-	diguanylate cyclase		gene	gene1239	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06200
RY45_06205	RY45_06205		RY45_06205	1309495	1311765	-	hypothetical protein		gene	gene1240	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06205
RY45_06210	RY45_06210	queF	queF	1311899	1312747	-	7-cyano-7-deazaguanine reductase	catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis	gene	gene1241	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06210
RY45_06215	RY45_06215		RY45_06215	1312905	1313453	+	protein syd		gene	gene1242	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06215
RY45_06220	RY45_06220		RY45_06220	1313517	1314302	-	hypothetical protein		gene	gene1243	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06220
RY45_06225	RY45_06225		RY45_06225	1314306	1314602	-	hypothetical protein		gene	gene1244	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06225
RY45_06230	RY45_06230		RY45_06230	1314691	1314927	-	hypothetical protein		gene	gene1245	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06230
RY45_06235	RY45_06235		RY45_06235	1314985	1315284	-	hypothetical protein		gene	gene1246	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06235
RY45_06240	RY45_06240		RY45_06240	1315354	1316382	-	hypothetical protein		gene	gene1247	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06240
RY45_06245	RY45_06245		RY45_06245	1316645	1316980	+	hypothetical protein		gene	gene1248	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06245
RY45_06250	RY45_06250		RY45_06250	1316977	1317750	+	pseudouridine synthase		gene	gene1249	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06250
RY45_06255	RY45_06255		RY45_06255	1317827	1318267	+	flavodoxin	An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group	gene	gene1250	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06255
RY45_06260	RY45_06260		RY45_06260	1318796	1320100	+	maltoporin	porin involved in the transport of maltose and maltodextrins	gene	gene1251	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06260
RY45_06265	RY45_06265		RY45_06265	1320192	1321163	+	maltose operon protein		gene	gene1252	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06265
RY45_06270	RY45_06270		RY45_06270	1321596	1323026	+	PTS glucose transporter subunit IIBC		gene	gene1253	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06270
RY45_06275	RY45_06275		RY45_06275	1323207	1323590	-	hypothetical protein		gene	gene1254	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06275
RY45_06280	RY45_06280	dapD	dapD	1323718	1324545	-	2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-carboxylate N-succinyltransferase	catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway	gene	gene1255	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06280
RY45_06285	RY45_06285		RY45_06285	1324712	1327366	-	protein-PII uridylyltransferase	catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein	gene	gene1256	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06285
RY45_06290	RY45_06290		RY45_06290	1327464	1328252	-	methionine aminopeptidase	catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn	gene	gene1257	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06290
RY45_06295	RY45_06295		RY45_06295	1328612	1329340	+	30S ribosomal protein S2		gene	gene1258	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06295
RY45_06300	RY45_06300		RY45_06300	1329445	1330326	+	elongation factor Ts		gene	gene1259	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06300
RY45_06305	RY45_06305		RY45_06305	1330398	1331132	+	uridylate kinase		gene	gene1260	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06305
RY45_06310	RY45_06310	frr	frr	1331227	1331784	+	ribosome recycling factor	Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs	gene	gene1261	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06310
RY45_06315	RY45_06315		RY45_06315	1331857	1332633	+	UDP pyrophosphate synthase		gene	gene1262	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06315
RY45_06320	RY45_06320		RY45_06320	1332660	1333517	+	phosphatidate cytidylyltransferase		gene	gene1263	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06320
RY45_06325	RY45_06325		RY45_06325	1333581	1334774	+	1-deoxy-D-xylulose 5-phosphate reductoisomerase	catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate	gene	gene1264	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06325
RY45_06330	RY45_06330		RY45_06330	1334857	1336209	+	zinc metallopeptidase RseP	catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response	gene	gene1265	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06330
RY45_06335	RY45_06335		RY45_06335	1336244	1338667	+	outer membrane protein assembly protein YaeT	part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins	gene	gene1266	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06335
RY45_06340	RY45_06340		RY45_06340	1338816	1339328	+	membrane protein		gene	gene1267	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06340
RY45_06345	RY45_06345	lpxD	lpxD	1339332	1340351	+	UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis	gene	gene1268	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06345
RY45_06350	RY45_06350		RY45_06350	1340376	1340837	+	3-hydroxyacyl-ACP dehydratase		gene	gene1269	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06350
RY45_06355	RY45_06355		RY45_06355	1340861	1341634	+	UDP-N-acetylglucosamine acyltransferase	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis	gene	gene1270	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06355
RY45_06360	RY45_06360	lpxB	lpxB	1341627	1342766	+	lipid-A-disaccharide synthase	catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM	gene	gene1271	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06360
RY45_06365	RY45_06365	rnhB	rnhB	1342842	1343432	+	ribonuclease HII	RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids	gene	gene1272	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06365
RY45_06370	RY45_06370	dnaE	dnaE	1343471	1346950	+	DNA polymerase III subunit alpha	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase	gene	gene1273	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06370
RY45_06375	RY45_06375		RY45_06375	1346967	1347917	+	acetyl-CoA carboxylase subunit alpha	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein	gene	gene1274	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06375
RY45_06380	RY45_06380		RY45_06380	1348322	1349842	+	transcriptional regulator		gene	gene1275	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06380
RY45_06385	RY45_06385	cadB	cadB	1350639	1351973	+	lysine/cadaverine antiporter	antiporter protein responsible for lysine import and cadaverine export%3B member of the lysine-dependent acid resistance system 4 (AR4)%3B inner membrane protein	gene	gene1276	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06385
RY45_06390	RY45_06390		RY45_06390	1352050	1354182	+	lysine decarboxylase LdcC	constitutive%3B catalyzes the formation of cadaverine from lysine	gene	gene1277	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06390
RY45_06395	RY45_06395		RY45_06395	1354255	1355121	+	pyridoxamine kinase	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal	gene	gene1278	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06395
RY45_06400	RY45_06400		RY45_06400	1355131	1356552	-	multidrug transporter MatE		gene	gene1279	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06400
RY45_06405	RY45_06405		RY45_06405	1356659	1357567	-	LysR family transcriptional regulator		gene	gene1280	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06405
RY45_06410	RY45_06410		RY45_06410	1358072	1359367	+	serine/threonine protein kinase		gene	gene1281	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06410
RY45_06415	RY45_06415		RY45_06415	1359435	1360475	-	ribonuclease Z		gene	gene1282	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06415
RY45_06420	RY45_06420		RY45_06420	1360633	1361535	+	LysR family transcriptional regulator		gene	gene1283	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06420
RY45_06425	RY45_06425		RY45_06425	1361555	1362499	-	alpha/beta hydrolase		gene	gene1284	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06425
RY45_06430	RY45_06430		RY45_06430	1362520	1363431	-	DeoR faimly transcriptional regulator		gene	gene1285	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06430
RY45_06435	RY45_06435		RY45_06435	1363678	1364574	+	LysR family transcriptional regulator		gene	gene1286	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06435
RY45_06440	RY45_06440		RY45_06440	1364698	1365978	+	transporter	uncharacterized member of the APC superfamily of amino acid transporters%3B unknown function	gene	gene1287	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06440
RY45_06445	RY45_06445		RY45_06445	1366019	1366558	-	alanine acetyltransferase		gene	gene1288	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06445
RY45_06450	RY45_06450		RY45_06450	1366642	1368381	-	ABC transporter		gene	gene1289	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06450
RY45_06455	RY45_06455		RY45_06455	1368744	1369181	-	hypothetical protein		gene	gene1290	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06455
RY45_06460	RY45_06460		RY45_06460	1369293	1371323	-	peptidase M13		gene	gene1291	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06460
RY45_06465	RY45_06465		RY45_06465	1371452	1372792	+	tRNA(Ile)-lysidine synthetase		gene	gene1292	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06465
RY45_06470	RY45_06470		RY45_06470	1372857	1373777	-	diguanylate cyclase		gene	gene1293	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06470
RY45_06475	RY45_06475	potassium transporter	potassium transporter	1373878	1375837	+		disrupted	pseudogene	gene1294	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06475
RY45_06480	RY45_06480		RY45_06480	1375923	1377068	-	patatin		gene	gene1295	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06480
RY45_06485	RY45_06485		RY45_06485	1377190	1378059	-	esterase		gene	gene1296	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06485
RY45_06490	RY45_06490		RY45_06490	1378131	1378712	-	transcriptional regulator		gene	gene1297	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06490
RY45_06495	RY45_06495		RY45_06495	1378917	1379561	-	LuxR family transcriptional regulator		gene	gene1298	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06495
RY45_06500	RY45_06500		RY45_06500	1379720	1380346	+	glutathione S-transferase		gene	gene1299	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06500
RY45_06505	RY45_06505		RY45_06505	1380454	1382562	-	alpha-amylase		gene	gene1300	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06505
RY45_06510	RY45_06510		RY45_06510	1382771	1383934	-	membrane protein		gene	gene1301	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06510
RY45_06515	RY45_06515		RY45_06515	1383934	1384305	-	polysaccharide biosynthesis protein GtrA		gene	gene1302	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06515
RY45_06520	RY45_06520		RY45_06520	1384302	1385360	-	bactoprenol glucosyl transferase		gene	gene1303	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06520
RY45_06525	RY45_06525		RY45_06525	1385417	1385962	-	hypothetical protein		gene	gene1304	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06525
RY45_06530	RY45_06530		RY45_06530	1386289	1387059	+	amino acid ABC transporter substrate-binding protein		gene	gene1305	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06530
RY45_06535	RY45_06535		RY45_06535	1387141	1388625	+	cell wall degradation protein		gene	gene1306	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06535
RY45_06540	RY45_06540		RY45_06540	1388776	1389321	+	membrane protein		gene	gene1307	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06540
RY45_06545	RY45_06545		RY45_06545	1389414	1389665	+	lipoprotein		gene	gene1308	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06545
RY45_06550	RY45_06550		RY45_06550	1389760	1390374	-	membrane protein		gene	gene1309	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06550
RY45_06555	RY45_06555		RY45_06555	1390517	1391281	-	cysteine biosynthesis protein CysZ		gene	gene1310	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06555
RY45_06560	RY45_06560	chromosome segregation protein SMC	chromosome segregation protein SMC	1391391	1394766	+		disrupted	pseudogene	gene1311	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06560
RY45_06565	RY45_06565		RY45_06565	1394782	1395894	+	cell division protein ZipA		gene	gene1312	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06565
RY45_06570	RY45_06570	ligA	ligA	1395994	1398000	+	NAD-dependent DNA ligase LigA	this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB	gene	gene1313	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06570
RY45_06575	RY45_06575		RY45_06575	1398074	1399087	-	sugar ABC transporter ATPase		gene	gene1314	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06575
RY45_06580	RY45_06580		RY45_06580	1399494	1401611	+	ribonucleoside-triphosphate reductase	Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates	gene	gene1315	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06580
RY45_06585	RY45_06585		RY45_06585	1401705	1402214	+	ribonucleoside-triphosphate reductase	activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions	gene	gene1316	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06585
RY45_06590	RY45_06590		RY45_06590	1402279	1402449	+	membrane protein		gene	gene1317	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06590
RY45_06595	RY45_06595		RY45_06595	1402594	1402986	+	hypothetical protein		gene	gene1318	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06595
RY45_06600	RY45_06600		RY45_06600	1403018	1403377	-	hypothetical protein		gene	gene1319	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06600
RY45_06605	RY45_06605		RY45_06605	1403505	1404266	-	transporter		gene	gene1320	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06605
RY45_06610	RY45_06610		RY45_06610	1404408	1405436	-	1%2C4-alpha-glucan branching protein		gene	gene1321	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06610
RY45_06615	RY45_06615		RY45_06615	1405447	1406502	-	hemolysin D		gene	gene1322	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06615
RY45_06620	RY45_06620		RY45_06620	1406504	1406977	-	MarR family transcriptional regulator		gene	gene1323	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06620
RY45_06625	RY45_06625		RY45_06625	1408023	1409330	+	citrate:sodium symporter		gene	gene1324	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06625
RY45_06630	RY45_06630		RY45_06630	1409342	1410892	+	malate dehydrogenase		gene	gene1325	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06630
RY45_06635	RY45_06635		RY45_06635	1410910	1412478	+	histidine kinase		gene	gene1326	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06635
RY45_06640	RY45_06640		RY45_06640	1412482	1413174	+	transcriptional regulator		gene	gene1327	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06640
RY45_06645	RY45_06645		RY45_06645	1413271	1414170	-	multidrug DMT transporter		gene	gene1328	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06645
RY45_06650	RY45_06650		RY45_06650	1414274	1415080	+	AraC family transcriptional regulator		gene	gene1329	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06650
RY45_06655	RY45_06655		RY45_06655	1415143	1416660	-	aldehyde dehydrogenase	catalyzes the oxidation of acetaldehyde%2C benzaldehyde%2C propionaldehyde and other aldehydes	gene	gene1330	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06655
RY45_06660	RY45_06660		RY45_06660	1416956	1418632	+	ATPase AAA		gene	gene1331	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06660
RY45_06665	RY45_06665		RY45_06665	1418719	1419894	+	acyl-CoA dehydrogenase		gene	gene1332	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06665
RY45_06670	RY45_06670		RY45_06670	1419894	1421048	+	CoA-transferase		gene	gene1333	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06670
RY45_06675	RY45_06675		RY45_06675	1421175	1421585	+	glyoxalase family protein		gene	gene1334	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06675
RY45_06680	RY45_06680		RY45_06680	1421688	1422377	+	transcriptional regulator PhoB	two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB	gene	gene1335	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06680
RY45_06685	RY45_06685	phoR	phoR	1422386	1423681	+	phosphate regulon sensor protein	membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB	gene	gene1336	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06685
RY45_06690	RY45_06690		RY45_06690	1424058	1425032	+	phosphate-binding protein		gene	gene1337	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06690
RY45_06695	RY45_06695		RY45_06695	1425196	1426002	+	peptidase		gene	gene1338	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06695
RY45_06700	RY45_06700		RY45_06700	1425990	1426496	+	GCN5 family acetyltransferase		gene	gene1339	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06700
RY45_06705	RY45_06705		RY45_06705	1426606	1427508	+	transcriptional regulator		gene	gene1340	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06705
RY45_06710	RY45_06710		RY45_06710	1427551	1428276	+	copper homeostasis protein CutC		gene	gene1341	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06710
RY45_06715	RY45_06715		RY45_06715	1428321	1428404	+	copper homeostasis protein CutC		gene	gene1342	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06715
RY45_06720	RY45_06720		RY45_06720	1428588	1429199	+	peptidylprolyl isomerase		gene	gene1343	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06720
RY45_06725	RY45_06725		RY45_06725	1429329	1430210	+	ABC transporter ATP-binding protein		gene	gene1344	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06725
RY45_06730	RY45_06730		RY45_06730	1430284	1431297	+	ABC transporter permease		gene	gene1345	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06730
RY45_06735	RY45_06735		RY45_06735	1431294	1431608	+	hypothetical protein		gene	gene1346	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06735
RY45_06740	RY45_06740		RY45_06740	1432070	1433089	+	amino acid ABC transporter substrate-binding protein		gene	gene1347	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06740
RY45_06745	RY45_06745		RY45_06745	1433219	1434346	+	amino acid ABC transporter permease		gene	gene1348	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06745
RY45_06750	RY45_06750		RY45_06750	1434356	1435450	+	amino acid ABC transporter permease		gene	gene1349	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06750
RY45_06755	RY45_06755		RY45_06755	1435464	1436210	+	ABC transporter ATP-binding protein		gene	gene1350	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06755
RY45_06760	RY45_06760		RY45_06760	1436321	1436536	-	hypothetical protein		gene	gene1351	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06760
RY45_06765	RY45_06765		RY45_06765	1436725	1437228	+	NUDIX hydrolase		gene	gene1352	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06765
RY45_06770	RY45_06770		RY45_06770	1437291	1438217	-	phenylacetate--CoA ligase		gene	gene1353	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06770
RY45_06775	RY45_06775		RY45_06775	1438344	1438817	+	peroxiredoxin		gene	gene1354	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06775
RY45_06780	RY45_06780		RY45_06780	1438942	1439910	+	calcium/sodium:proton antiporter	YrbG%3B inner membrane protein involved in cell envelope integrity%3B putative sodium ion/calcium ion exchanger%3B in E. coli it is non essential for cell viability%3B member of the YRBG family of cation/Ca2+ exchangers	gene	gene1355	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06780
RY45_06785	RY45_06785		RY45_06785	1439976	1441127	-	ornithine decarboxylase		gene	gene1356	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06785
RY45_06790	RY45_06790		RY45_06790	1441986	1443356	+	sodium:alanine symporter		gene	gene1357	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06790
RY45_06795	RY45_06795		RY45_06795	1443615	1445294	+	hypothetical protein		gene	gene1358	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06795
RY45_06800	RY45_06800	hypothetical protein	hypothetical protein	1445308	1446849	+		disrupted	pseudogene	gene1359	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06800
RY45_06805	RY45_06805		RY45_06805	1446902	1457113	+	hypothetical protein		gene	gene1360	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06805
RY45_06810	RY45_06810	hemolysin	hemolysin	1458465	1458926	+		disrupted	pseudogene	gene1361	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06810
RY45_06815	RY45_06815		RY45_06815	1460518	1461216	-	protein ligase		gene	gene1362	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06815
RY45_06820	RY45_06820		RY45_06820	1461316	1462713	-	xanthine permease XanP	high-affinity transporter for xanthine	gene	gene1363	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06820
RY45_06825	RY45_06825		RY45_06825	1462959	1464098	+	diguanylate cyclase		gene	gene1364	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06825
RY45_06830	RY45_06830		RY45_06830	1464123	1464371	-	hypothetical protein		gene	gene1365	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06830
RY45_06835	RY45_06835		RY45_06835	1464522	1465901	-	multidrug transporter MatE		gene	gene1366	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06835
RY45_06840	RY45_06840		RY45_06840	1466022	1466879	+	AraC family transcriptional regulator		gene	gene1367	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06840
RY45_06845	RY45_06845		RY45_06845	1466948	1468642	+	malate dehydrogenase	malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate	gene	gene1368	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06845
RY45_06850	RY45_06850		RY45_06850	1468783	1469838	-	membrane protein		gene	gene1369	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06850
RY45_06855	RY45_06855		RY45_06855	1470050	1471051	-	membrane protein		gene	gene1370	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06855
RY45_06860	RY45_06860		RY45_06860	1471483	1472517	-	membrane protein		gene	gene1371	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06860
RY45_06865	RY45_06865		RY45_06865	1472826	1473422	-	hypothetical protein		gene	gene1372	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06865
RY45_06870	RY45_06870		RY45_06870	1473681	1473947	+	XRE family transcriptional regulator		gene	gene1373	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06870
RY45_06875	RY45_06875		RY45_06875	1474153	1475514	+	transporter		gene	gene1374	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06875
RY45_06880	RY45_06880		RY45_06880	1475601	1476467	-	patatin		gene	gene1375	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06880
RY45_06885	RY45_06885		RY45_06885	1476501	1478054	-	diguanylate cyclase		gene	gene1376	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06885
RY45_06890	RY45_06890		RY45_06890	1478263	1479312	+	hemolysin D		gene	gene1377	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06890
RY45_06895	RY45_06895		RY45_06895	1479312	1482431	+	multidrug transporter AcrB		gene	gene1378	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06895
RY45_06900	RY45_06900		RY45_06900	1482525	1482893	+	hypothetical protein		gene	gene1379	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06900
RY45_06905	RY45_06905		RY45_06905	1483031	1485448	+	hypothetical protein		gene	gene1380	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06905
RY45_06910	RY45_06910		RY45_06910	1488021	1488230	+	hypothetical protein		gene	gene1381	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06910
RY45_06915	RY45_06915		RY45_06915	1488312	1488746	-	hypothetical protein		gene	gene1382	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06915
RY45_06920	RY45_06920		RY45_06920	1488743	1489273	-	damage-inducible protein DinB		gene	gene1383	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06920
RY45_06925	RY45_06925		RY45_06925	1489461	1490375	+	oxidoreductase		gene	gene1384	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06925
RY45_06930	RY45_06930		RY45_06930	1490446	1490652	+	hypothetical protein		gene	gene1385	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06930
RY45_06935	RY45_06935		RY45_06935	1490649	1491170	+	crossover junction endodeoxyribonuclease RuvC		gene	gene1386	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06935
RY45_06940	RY45_06940		RY45_06940	1491496	1492182	+	porin	porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure	gene	gene1387	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06940
RY45_06945	RY45_06945		RY45_06945	1492306	1493055	-	transglycosylase		gene	gene1388	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06945
RY45_06950	RY45_06950		RY45_06950	1493228	1494625	-	alpha-amylase		gene	gene1389	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06950
RY45_06955	RY45_06955		RY45_06955	1494820	1495983	-	peptidase M23		gene	gene1390	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06955
RY45_06960	RY45_06960		RY45_06960	1496412	1496891	+	acetyltransferase		gene	gene1391	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06960
RY45_06965	RY45_06965		RY45_06965	1496896	1497438	-	hypothetical protein		gene	gene1392	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06965
RY45_06970	RY45_06970	cls	cls	1497536	1499017	+	cardiolipin synthetase	catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol)	gene	gene1393	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06970
RY45_06975	RY45_06975		RY45_06975	1499113	1500375	+	lipoprotein		gene	gene1394	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06975
RY45_06980	RY45_06980		RY45_06980	1500445	1501281	-	formyltetrahydrofolate deformylase		gene	gene1395	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06980
RY45_06985	RY45_06985		RY45_06985	1501740	1502393	+	3%2C4-dihydroxy-2-butanone 4-phosphate synthase		gene	gene1396	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06985
RY45_06990	RY45_06990		RY45_06990	1502618	1502860	+	lipoprotein		gene	gene1397	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06990
RY45_06995	RY45_06995		RY45_06995	1503004	1503852	-	thioredoxin		gene	gene1398	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_06995
RY45_07000	RY45_07000		RY45_07000	1503849	1504571	-	4-phosphopantetheinyl transferase		gene	gene1399	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07000
RY45_07005	RY45_07005		RY45_07005	1504847	1505335	+	peptidase P60		gene	gene1400	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07005
RY45_07010	RY45_07010		RY45_07010	1505484	1506440	+	23S rRNA methyltransferase		gene	gene1401	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07010
RY45_07015	RY45_07015		RY45_07015	1506712	1507431	+	dehydratase		gene	gene1402	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07015
RY45_07020	RY45_07020		RY45_07020	1507580	1508578	-	hypothetical protein		gene	gene1403	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07020
RY45_07025	RY45_07025		RY45_07025	1508606	1509523	-	peptidoglycan-binding protein		gene	gene1404	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07025
RY45_07030	RY45_07030		RY45_07030	1509945	1510034	+	tRNA-Ser		tRNA	gene1405	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07030
RY45_07035	RY45_07035		RY45_07035	1510252	1511163	-	LysR family transcriptional regulator		gene	gene1406	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07035
RY45_07040	RY45_07040		RY45_07040	1511318	1512124	+	iron ABC transporter substrate-binding protein		gene	gene1407	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07040
RY45_07045	RY45_07045		RY45_07045	1512111	1514399	+	CbbBc protein		gene	gene1408	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07045
RY45_07050	RY45_07050		RY45_07050	1515121	1515843	+	hypothetical protein		gene	gene1409	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07050
RY45_07055	RY45_07055		RY45_07055	1516137	1516412	+	hypothetical protein		gene	gene1410	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07055
RY45_07060	RY45_07060		RY45_07060	1516507	1517646	+	hypothetical protein		gene	gene1411	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07060
RY45_07065	RY45_07065		RY45_07065	1518000	1518200	-	hypothetical protein		gene	gene1412	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07065
RY45_07070	RY45_07070		RY45_07070	1518717	1519202	+	hypothetical protein		gene	gene1413	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07070
RY45_07075	RY45_07075		RY45_07075	1519221	1522289	+	virulence factor SrfB		gene	gene1414	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07075
RY45_07080	RY45_07080		RY45_07080	1522286	1524988	+	hypothetical protein		gene	gene1415	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07080
RY45_07085	RY45_07085		RY45_07085	1524994	1526058	+	hypothetical protein		gene	gene1416	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07085
RY45_07090	RY45_07090		RY45_07090	1526076	1528028	+	serine/threonine protein kinase		gene	gene1417	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07090
RY45_07095	RY45_07095		RY45_07095	1528028	1528738	+	ABC transporter ATP-binding protein		gene	gene1418	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07095
RY45_07100	RY45_07100		RY45_07100	1528722	1529939	+	ABC transporter permease		gene	gene1419	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07100
RY45_07105	RY45_07105		RY45_07105	1529959	1531473	+	hypothetical protein		gene	gene1420	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07105
RY45_07110	RY45_07110	transposase	transposase	1531534	1531811	+		disrupted	pseudogene	gene1421	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07110
RY45_07115	RY45_07115		RY45_07115	1531868	1532683	+	transposase		gene	gene1422	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07115
RY45_07120	RY45_07120		RY45_07120	1532780	1532855	-	tRNA-Thr		tRNA	gene1423	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07120
RY45_07125	RY45_07125		RY45_07125	1532941	1533681	-	hydrolase		gene	gene1424	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07125
RY45_07130	RY45_07130		RY45_07130	1534150	1534803	+	TetR family transcriptional regulator		gene	gene1425	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07130
RY45_07135	RY45_07135		RY45_07135	1534852	1537176	+	acyl-CoA dehydrogenase	functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA	gene	gene1426	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07135
RY45_07140	RY45_07140		RY45_07140	1537347	1540409	+	acriflavine resistance protein B		gene	gene1427	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07140
RY45_07145	RY45_07145		RY45_07145	1540425	1541471	+	hemolysin D		gene	gene1428	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07145
RY45_07150	RY45_07150		RY45_07150	1541537	1542976	-	pyruvate kinase	catalyzes the formation of phosphoenolpyruvate from pyruvate	gene	gene1429	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07150
RY45_07155	RY45_07155		RY45_07155	1543140	1543997	-	transcriptional regulator	Represses the expression of the zwf%2C eda%2C glp and gap	gene	gene1430	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07155
RY45_07160	RY45_07160	glk	glk	1544344	1545312	+	glucokinase	catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate	gene	gene1431	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07160
RY45_07165	RY45_07165		RY45_07165	1545615	1546997	-	histidine kinase		gene	gene1432	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07165
RY45_07170	RY45_07170		RY45_07170	1546997	1547671	-	transcriptional regulator		gene	gene1433	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07170
RY45_07175	RY45_07175	rimO	rimO	1547893	1549221	-	ribosomal protein S12 methylthiotransferase	catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit	gene	gene1434	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07175
RY45_07180	RY45_07180		RY45_07180	1549492	1550583	+	phosphodiesterase		gene	gene1435	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07180
RY45_07185	RY45_07185		RY45_07185	1550812	1551588	+	lipoprotein		gene	gene1436	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07185
RY45_07190	RY45_07190		RY45_07190	1551791	1552108	+	flagellar hook-basal body protein FliE		gene	gene1437	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07190
RY45_07195	RY45_07195		RY45_07195	1552166	1553878	+	flagellar M-ring protein FliF		gene	gene1438	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07195
RY45_07200	RY45_07200		RY45_07200	1553871	1554932	+	flagellar motor switch protein FliG		gene	gene1439	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07200
RY45_07205	RY45_07205		RY45_07205	1554997	1555803	+	flagellar assembly protein FliH		gene	gene1440	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07205
RY45_07210	RY45_07210	fliI	fliI	1555876	1557207	+	ATP synthase	involved in type III protein export during flagellum assembly	gene	gene1441	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07210
RY45_07215	RY45_07215		RY45_07215	1557234	1557674	+	flagellar export protein FliJ		gene	gene1442	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07215
RY45_07220	RY45_07220		RY45_07220	1557766	1559781	+	flagellar hook-length control protein FliK		gene	gene1443	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07220
RY45_07225	RY45_07225	fliL	fliL	1559839	1560357	+	flagellar basal body-associated protein FliL	interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring	gene	gene1444	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07225
RY45_07230	RY45_07230		RY45_07230	1560367	1561437	+	flagellar motor switch protein FliM		gene	gene1445	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07230
RY45_07235	RY45_07235		RY45_07235	1561489	1561881	+	flagellar motor switch protein FliN		gene	gene1446	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07235
RY45_07240	RY45_07240		RY45_07240	1561943	1562326	+	flagellar biosynthesis protein FliO		gene	gene1447	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07240
RY45_07245	RY45_07245		RY45_07245	1562313	1563092	+	flagellar biosynthesis protein flip		gene	gene1448	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07245
RY45_07250	RY45_07250		RY45_07250	1563120	1563389	+	flagellar biosynthesis protein FliQ		gene	gene1449	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07250
RY45_07255	RY45_07255		RY45_07255	1563457	1564248	+	flagellar biosynthesis protein FliR		gene	gene1450	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07255
RY45_07260	RY45_07260		RY45_07260	1564383	1565513	+	flagellar biosynthesis protein FlhB		gene	gene1451	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07260
RY45_07265	RY45_07265		RY45_07265	1565621	1567723	+	flagellar biosynthesis protein FlhA		gene	gene1452	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07265
RY45_07270	RY45_07270		RY45_07270	1567740	1569161	+	flagellar biosynthesis regulator FlhF		gene	gene1453	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07270
RY45_07275	RY45_07275		RY45_07275	1569163	1570038	+	cobyrinic acid a%2Cc-diamide synthase		gene	gene1454	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07275
RY45_07280	RY45_07280		RY45_07280	1570031	1570750	+	RNA polymerase sigma 70		gene	gene1455	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07280
RY45_07285	RY45_07285		RY45_07285	1570862	1571245	+	histidine kinase		gene	gene1456	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07285
RY45_07290	RY45_07290		RY45_07290	1571258	1571998	+	protein phosphatase		gene	gene1457	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07290
RY45_07295	RY45_07295		RY45_07295	1572010	1574208	+	chemotaxis protein CheA		gene	gene1458	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07295
RY45_07300	RY45_07300		RY45_07300	1574241	1575356	+	chemotaxis protein CheY		gene	gene1459	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07300
RY45_07305	RY45_07305	motC	motC	1575359	1576096	+	flagellar motor protein	homologous to MotA%3B this protein with a related protein (a MotB homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine%3B either MotAB or MotCD is sufficient for swimming%2C but both are necessary for swarming motility%3B these organisms have both MotA and MotC	gene	gene1460	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07305
RY45_07310	RY45_07310		RY45_07310	1576099	1577025	+	cell envelope biogenesis protein OmpA		gene	gene1461	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07310
RY45_07315	RY45_07315		RY45_07315	1577030	1577824	+	cobalamin biosynthesis protein CobQ		gene	gene1462	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07315
RY45_07320	RY45_07320		RY45_07320	1577821	1578693	+	chemotaxis protein CheW		gene	gene1463	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07320
RY45_07325	RY45_07325		RY45_07325	1578763	1579251	+	chemotaxis protein CheW		gene	gene1464	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07325
RY45_07330	RY45_07330		RY45_07330	1579270	1579656	+	DNA repair protein		gene	gene1465	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07330
RY45_07335	RY45_07335		RY45_07335	1579811	1580446	+	cytochrome C biogenesis protein CcmA		gene	gene1466	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07335
RY45_07340	RY45_07340		RY45_07340	1580452	1581120	+	heme ABC transporter permease	with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC	gene	gene1467	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07340
RY45_07345	RY45_07345		RY45_07345	1581284	1582024	+	heme ABC transporter permease		gene	gene1468	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07345
RY45_07350	RY45_07350		RY45_07350	1582027	1582233	+	transcriptional regulator		gene	gene1469	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07350
RY45_07355	RY45_07355		RY45_07355	1582230	1582721	+	cytochrome C biogenesis protein CcmE	CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane	gene	gene1470	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07355
RY45_07360	RY45_07360		RY45_07360	1582804	1584759	+	cytochrome C biogenesis protein CcmF	cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c	gene	gene1471	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07360
RY45_07365	RY45_07365		RY45_07365	1584756	1585286	+	thiol:disulfide interchange protein		gene	gene1472	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07365
RY45_07370	RY45_07370		RY45_07370	1585298	1585777	+	cystathionine gamma-synthase		gene	gene1473	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07370
RY45_07375	RY45_07375		RY45_07375	1585774	1587048	+	cytochrome C biogenesis protein CcmH		gene	gene1474	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07375
RY45_07380	RY45_07380		RY45_07380	1587129	1587941	+	membrane protein		gene	gene1475	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07380
RY45_07385	RY45_07385		RY45_07385	1588068	1588652	-	superoxide dismutase	SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals	gene	gene1476	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07385
RY45_07390	RY45_07390		RY45_07390	1588939	1589283	+	glutaredoxin		gene	gene1477	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07390
RY45_07395	RY45_07395		RY45_07395	1589361	1590572	-	SAM-dependent methlyltransferase		gene	gene1478	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07395
RY45_07400	RY45_07400		RY45_07400	1590782	1592761	+	hypothetical protein		gene	gene1479	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07400
RY45_07405	RY45_07405		RY45_07405	1592758	1593081	+	hypothetical protein		gene	gene1480	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07405
RY45_07410	RY45_07410		RY45_07410	1593264	1593902	+	pyridoxamine 5'-phosphate oxidase	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate	gene	gene1481	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07410
RY45_07415	RY45_07415		RY45_07415	1593932	1594546	+	glutathione S-transferase		gene	gene1482	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07415
RY45_07420	RY45_07420		RY45_07420	1594546	1596165	+	hypothetical protein		gene	gene1483	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07420
RY45_07425	RY45_07425		RY45_07425	1596198	1596707	+	acetyltransferase		gene	gene1484	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07425
RY45_07430	RY45_07430		RY45_07430	1596800	1597051	+	hypothetical protein		gene	gene1485	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07430
RY45_07435	RY45_07435		RY45_07435	1597326	1600193	+	hypothetical protein		gene	gene1486	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07435
RY45_07440	RY45_07440		RY45_07440	1600336	1601466	-	50S ribosomal protein L16 arginine hydroxylase		gene	gene1487	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07440
RY45_07445	RY45_07445		RY45_07445	1601632	1603002	-	adenylosuccinate lyase	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide	gene	gene1488	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07445
RY45_07450	RY45_07450		RY45_07450	1603130	1603744	-	lysogenization regulator	HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis	gene	gene1489	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07450
RY45_07455	RY45_07455	mnmA	mnmA	1603957	1605063	-	tRNA 2-thiouridylase	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs	gene	gene1490	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07455
RY45_07460	RY45_07460		RY45_07460	1605222	1605689	-	7%2C8-dihydro-8-oxoguanine-triphosphatase		gene	gene1491	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07460
RY45_07465	RY45_07465		RY45_07465	1605786	1606730	-	pseudouridine synthase		gene	gene1492	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07465
RY45_07470	RY45_07470		RY45_07470	1606808	1607575	-	PTS fructose transporter subunit IIA		gene	gene1493	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07470
RY45_07475	RY45_07475		RY45_07475	1607576	1607881	-	PTS fructose transporter subunit IIB		gene	gene1494	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07475
RY45_07480	RY45_07480	uhpT	uhpT	1608147	1609553	-	sugar phosphate antiporter	cytoplasmic membrane protein that functions as a monomer%3B catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate	gene	gene1495	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07480
RY45_07485	RY45_07485	hypothetical protein	hypothetical protein	1610089	1610454	-		disrupted	pseudogene	gene1496	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07485
RY45_07490	RY45_07490	hypothetical protein	hypothetical protein	1611561	1611884	-		disrupted	pseudogene	gene1497	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07490
RY45_07495	RY45_07495		RY45_07495	1612078	1613985	-	PTS fructose transporter subunit IIC		gene	gene1498	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07495
RY45_07500	RY45_07500		RY45_07500	1614625	1615416	-	hypothetical protein		gene	gene1499	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07500
RY45_07505	RY45_07505		RY45_07505	1616527	1617066	-	ATPase AAA		gene	gene1500	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07505
RY45_07510	RY45_07510		RY45_07510	1618245	1618961	-	hypothetical protein		gene	gene1501	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07510
RY45_07515	RY45_07515		RY45_07515	1619262	1619537	-	hypothetical protein		gene	gene1502	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07515
RY45_07520	RY45_07520		RY45_07520	1619633	1620097	-	MerR family transcriptional regulator		gene	gene1503	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07520
RY45_07525	RY45_07525		RY45_07525	1620310	1621554	+	2%2C4-dienoyl-CoA reductase		gene	gene1504	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07525
RY45_07530	RY45_07530		RY45_07530	1621580	1622617	-	transcriptional regulator	regulates malXY which are involved in maltose-glucose transport	gene	gene1505	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07530
RY45_07535	RY45_07535		RY45_07535	1622893	1624479	+	PTS maltose transporter subunit IICB		gene	gene1506	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07535
RY45_07540	RY45_07540		RY45_07540	1624553	1625755	+	bifunctional beta-cystathionase/maltose regulon regulatory protein	catalyzes the formation of homocysteine and pyruvate from cystathionine%3B also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT	gene	gene1507	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07540
RY45_07545	RY45_07545		RY45_07545	1625783	1626571	-	hypothetical protein		gene	gene1508	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07545
RY45_07550	RY45_07550	hypothetical protein	hypothetical protein	1626663	1626950	-		disrupted	pseudogene	gene1509	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07550
RY45_07555	RY45_07555		RY45_07555	1627152	1629038	-	PTS fructose transporter subunit IIA		gene	gene1510	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07555
RY45_07560	RY45_07560		RY45_07560	1630000	1630506	-	hypothetical protein		gene	gene1511	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07560
RY45_07565	RY45_07565		RY45_07565	1630744	1631943	-	mannose-6-phosphate isomerase	catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate	gene	gene1512	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07565
RY45_07570	RY45_07570		RY45_07570	1632073	1632948	+	AraC family transcriptional regulator		gene	gene1513	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07570
RY45_07575	RY45_07575		RY45_07575	1633151	1634404	+	isocitrate dehydrogenase	Converts isocitrate to alpha ketoglutarate	gene	gene1514	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07575
RY45_07580	RY45_07580		RY45_07580	1635002	1636333	-	D-serine dehydratase	catalyzes the formation of pyruvate from serine	gene	gene1515	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07580
RY45_07585	RY45_07585		RY45_07585	1636350	1637687	-	DsdX permease		gene	gene1516	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07585
RY45_07590	RY45_07590		RY45_07590	1637902	1638870	+	transcriptional regulator	regulates the synthesis and expression of the dsdXA operon and dadA gene	gene	gene1517	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07590
RY45_07595	RY45_07595		RY45_07595	1638954	1639499	-	hypothetical protein		gene	gene1518	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07595
RY45_07600	RY45_07600		RY45_07600	1639620	1639976	-	hypothetical protein		gene	gene1519	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07600
RY45_07605	RY45_07605	restriction modification system DNA specificity subunit	restriction modification system DNA specificity subunit	1640012	1640245	-		disrupted	pseudogene	gene1520	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07605
RY45_07610	RY45_07610		RY45_07610	1641406	1642920	-	SAM-dependent methyltransferase		gene	gene1521	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07610
RY45_07615	RY45_07615		RY45_07615	1643020	1646553	-	DEAD/DEAH box helicase		gene	gene1522	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07615
RY45_07620	RY45_07620		RY45_07620	1646556	1647494	-	restriction endonuclease		gene	gene1523	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07620
RY45_07625	RY45_07625		RY45_07625	1647765	1648940	-	integrase		gene	gene1524	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07625
RY45_07630	RY45_07630		RY45_07630	1648907	1649104	-	phage excisionase		gene	gene1525	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07630
RY45_07635	RY45_07635		RY45_07635	1649097	1649537	-	hypothetical protein		gene	gene1526	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07635
RY45_07640	RY45_07640		RY45_07640	1649594	1649842	-	hypothetical protein		gene	gene1527	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07640
RY45_07645	RY45_07645		RY45_07645	1649945	1650559	-	hypothetical protein		gene	gene1528	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07645
RY45_07650	RY45_07650		RY45_07650	1650556	1650861	-	nucleoside 2-deoxyribosyltransferase family protein		gene	gene1529	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07650
RY45_07655	RY45_07655		RY45_07655	1650865	1651566	-	hypothetical protein		gene	gene1530	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07655
RY45_07660	RY45_07660		RY45_07660	1651652	1651879	-	hypothetical protein		gene	gene1531	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07660
RY45_07665	RY45_07665		RY45_07665	1651951	1652169	-	hypothetical protein		gene	gene1532	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07665
RY45_07670	RY45_07670	hypothetical protein	hypothetical protein	1653087	1653308	-		disrupted	pseudogene	gene1533	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07670
RY45_07675	RY45_07675		RY45_07675	1653305	1653883	-	hypothetical protein		gene	gene1534	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07675
RY45_07680	RY45_07680	hypothetical protein	hypothetical protein	1653934	1654152	-		disrupted	pseudogene	gene1535	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07680
RY45_07685	RY45_07685		RY45_07685	1654149	1655060	-	recombination associated protein	Required for efficient pilin antigenic variation	gene	gene1536	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07685
RY45_07690	RY45_07690		RY45_07690	1655316	1655894	-	hypothetical protein		gene	gene1537	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07690
RY45_07695	RY45_07695		RY45_07695	1655887	1656501	-	hypothetical protein		gene	gene1538	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07695
RY45_07700	RY45_07700		RY45_07700	1656498	1657715	-	hypothetical protein		gene	gene1539	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07700
RY45_07705	RY45_07705		RY45_07705	1657766	1658854	-	hypothetical protein		gene	gene1540	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07705
RY45_07710	RY45_07710	recombinase	recombinase	1659212	1659844	-		disrupted	pseudogene	gene1541	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07710
RY45_07715	RY45_07715		RY45_07715	1659901	1660710	-	exodeoxyribonuclease VIII		gene	gene1542	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07715
RY45_07720	RY45_07720		RY45_07720	1660743	1661105	-	hypothetical protein		gene	gene1543	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07720
RY45_07725	RY45_07725		RY45_07725	1661102	1661467	-	hypothetical protein		gene	gene1544	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07725
RY45_07730	RY45_07730		RY45_07730	1661470	1661661	-	hypothetical protein		gene	gene1545	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07730
RY45_07735	RY45_07735	hypothetical protein	hypothetical protein	1662064	1662423	-		disrupted	pseudogene	gene1546	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07735
RY45_07740	RY45_07740		RY45_07740	1663301	1663546	-	hypothetical protein		gene	gene1547	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07740
RY45_07745	RY45_07745		RY45_07745	1663846	1664025	-	hypothetical protein		gene	gene1548	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07745
RY45_07750	RY45_07750		RY45_07750	1664661	1665245	-	hypothetical protein		gene	gene1549	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07750
RY45_07755	RY45_07755		RY45_07755	1665412	1665618	+	hypothetical protein		gene	gene1550	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07755
RY45_07760	RY45_07760		RY45_07760	1665660	1666049	+	hypothetical protein		gene	gene1551	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07760
RY45_07765	RY45_07765		RY45_07765	1666054	1666272	+	hypothetical protein		gene	gene1552	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07765
RY45_07770	RY45_07770		RY45_07770	1666664	1667440	+	hypothetical protein		gene	gene1553	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07770
RY45_07775	RY45_07775		RY45_07775	1667430	1668842	+	hypothetical protein		gene	gene1554	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07775
RY45_07780	RY45_07780		RY45_07780	1668835	1669146	+	hypothetical protein		gene	gene1555	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07780
RY45_07785	RY45_07785	hypothetical protein	hypothetical protein	1669224	1669466	+		disrupted	pseudogene	gene1556	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07785
RY45_07790	RY45_07790		RY45_07790	1669714	1670133	+	P21 prophage-derived protein NinB		gene	gene1557	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07790
RY45_07795	RY45_07795	adenylosuccinate synthase	adenylosuccinate synthase	1670130	1670744	+		disrupted	pseudogene	gene1558	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07795
RY45_07800	RY45_07800		RY45_07800	1670786	1671103	+	hypothetical protein		gene	gene1559	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07800
RY45_07805	RY45_07805		RY45_07805	1671100	1671339	+	hypothetical protein		gene	gene1560	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07805
RY45_07810	RY45_07810		RY45_07810	1671336	1671758	+	hypothetical protein		gene	gene1561	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07810
RY45_07815	RY45_07815		RY45_07815	1671755	1672366	+	hypothetical protein		gene	gene1562	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07815
RY45_07820	RY45_07820	hypothetical protein	hypothetical protein	1672484	1672792	+		disrupted	pseudogene	gene1563	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07820
RY45_07825	RY45_07825		RY45_07825	1672825	1673019	+	hypothetical protein		gene	gene1564	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07825
RY45_07830	RY45_07830		RY45_07830	1673043	1673264	+	hypothetical protein		gene	gene1565	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07830
RY45_07835	RY45_07835		RY45_07835	1673409	1673615	+	hypothetical protein		gene	gene1566	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07835
RY45_07840	RY45_07840		RY45_07840	1673612	1674160	+	hypothetical protein		gene	gene1567	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07840
RY45_07845	RY45_07845		RY45_07845	1674168	1674392	+	hypothetical protein		gene	gene1568	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07845
RY45_07850	RY45_07850		RY45_07850	1674389	1674571	+	hypothetical protein		gene	gene1569	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07850
RY45_07855	RY45_07855		RY45_07855	1674698	1675285	+	hypothetical protein		gene	gene1570	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07855
RY45_07860	RY45_07860		RY45_07860	1675275	1676843	+	TerL		gene	gene1571	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07860
RY45_07865	RY45_07865		RY45_07865	1676992	1679052	+	hypothetical protein		gene	gene1572	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07865
RY45_07870	RY45_07870		RY45_07870	1679425	1680402	+	hypothetical protein		gene	gene1573	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07870
RY45_07875	RY45_07875		RY45_07875	1680420	1681421	+	hypothetical protein		gene	gene1574	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07875
RY45_07880	RY45_07880	hypothetical protein	hypothetical protein	1681695	1681895	+		disrupted	pseudogene	gene1575	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07880
RY45_07885	RY45_07885		RY45_07885	1681943	1682341	+	hypothetical protein		gene	gene1576	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07885
RY45_07890	RY45_07890		RY45_07890	1682335	1684638	+	hypothetical protein		gene	gene1577	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07890
RY45_07895	RY45_07895		RY45_07895	1686012	1686689	+	hypothetical protein		gene	gene1578	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07895
RY45_07900	RY45_07900		RY45_07900	1686699	1687073	+	hypothetical protein		gene	gene1579	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07900
RY45_07905	RY45_07905		RY45_07905	1687114	1687296	-	hypothetical protein		gene	gene1580	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07905
RY45_07910	RY45_07910		RY45_07910	1687346	1688287	+	hypothetical protein		gene	gene1581	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07910
RY45_07915	RY45_07915		RY45_07915	1688287	1688790	+	hypothetical protein		gene	gene1582	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07915
RY45_07920	RY45_07920		RY45_07920	1688787	1689593	+	hypothetical protein		gene	gene1583	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07920
RY45_07925	RY45_07925		RY45_07925	1689624	1690511	-	hypothetical protein		gene	gene1584	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07925
RY45_07930	RY45_07930	hypothetical protein	hypothetical protein	1690954	1691133	-		disrupted	pseudogene	gene1585	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07930
RY45_07935	RY45_07935		RY45_07935	1691521	1692303	+	hypothetical protein		gene	gene1586	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07935
RY45_07940	RY45_07940		RY45_07940	1692300	1692575	+	hypothetical protein		gene	gene1587	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07940
RY45_07945	RY45_07945	hypothetical protein	hypothetical protein	1693335	1699115	+		disrupted	pseudogene	gene1588	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07945
RY45_07950	RY45_07950		RY45_07950	1699178	1699381	+	hypothetical protein		gene	gene1589	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07950
RY45_07955	RY45_07955		RY45_07955	1699747	1700109	-	hypothetical protein		gene	gene1590	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07955
RY45_07960	RY45_07960	smpB	smpB	1701311	1701799	-	SsrA-binding protein	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation	gene	gene1591	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07960
RY45_07965	RY45_07965		RY45_07965	1701969	1702403	+	cyclase		gene	gene1592	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07965
RY45_07970	RY45_07970		RY45_07970	1702396	1702743	+	protein RnfH		gene	gene1593	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07970
RY45_07975	RY45_07975		RY45_07975	1702871	1703506	-	nucleoside-diphosphate sugar epimerase		gene	gene1594	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07975
RY45_07980	RY45_07980		RY45_07980	1703631	1703969	-	membrane protein		gene	gene1595	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07980
RY45_07985	RY45_07985		RY45_07985	1704105	1705256	-	alcohol dehydrogenase		gene	gene1596	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07985
RY45_07990	RY45_07990		RY45_07990	1705649	1706404	+	uridine phosphorylase	catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway	gene	gene1597	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07990
RY45_07995	RY45_07995		RY45_07995	1706556	1707284	-	pseudouridylate synthase		gene	gene1598	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_07995
RY45_08000	RY45_08000		RY45_08000	1707436	1708371	+	hypothetical protein		gene	gene1599	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08000
RY45_08005	RY45_08005		RY45_08005	1708406	1708876	+	hypothetical protein		gene	gene1600	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08005
RY45_08010	RY45_08010		RY45_08010	1708987	1709283	-	hypothetical protein		gene	gene1601	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08010
RY45_08015	RY45_08015		RY45_08015	1709312	1709842	-	hypothetical protein		gene	gene1602	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08015
RY45_08020	RY45_08020		RY45_08020	1710017	1711639	-	chemotaxis protein		gene	gene1603	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08020
RY45_08025	RY45_08025		RY45_08025	1711804	1712436	+	threonine transporter RhtB		gene	gene1604	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08025
RY45_08030	RY45_08030		RY45_08030	1712688	1713476	+	membrane protein		gene	gene1605	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08030
RY45_08035	RY45_08035		RY45_08035	1713590	1714798	-	sodium:proton antiporter		gene	gene1606	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08035
RY45_08040	RY45_08040		RY45_08040	1714833	1715936	-	hyaluronidase		gene	gene1607	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08040
RY45_08045	RY45_08045	cvrA	cvrA	1715979	1717706	-	potassium/proton antiporter	the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter%3B can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli	gene	gene1608	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08045
RY45_08050	RY45_08050		RY45_08050	1718092	1718781	-	peptidase M15		gene	gene1609	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08050
RY45_08055	RY45_08055		RY45_08055	1718778	1719905	-	succinyl-diaminopimelate desuccinylase		gene	gene1610	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08055
RY45_08060	RY45_08060		RY45_08060	1719928	1720278	-	ArsC family transcriptional regulator		gene	gene1611	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08060
RY45_08065	RY45_08065		RY45_08065	1720474	1721385	-	LysR family transcriptional regulator		gene	gene1612	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08065
RY45_08070	RY45_08070		RY45_08070	1721702	1722094	-	hypothetical protein		gene	gene1613	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08070
RY45_08075	RY45_08075		RY45_08075	1722303	1723679	+	C4-dicarboxylate ABC transporter		gene	gene1614	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08075
RY45_08080	RY45_08080		RY45_08080	1723764	1724903	+	peptidase M20		gene	gene1615	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08080
RY45_08085	RY45_08085		RY45_08085	1724995	1725651	-	hypothetical protein		gene	gene1616	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08085
RY45_08090	RY45_08090		RY45_08090	1725787	1727130	-	C4-dicarboxylate transporter	functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to DcuA%3B DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate%2C malate%2C fumarate and succinate) transporters	gene	gene1617	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08090
RY45_08095	RY45_08095		RY45_08095	1727508	1728908	-	asparaginyl-tRNA synthetase		gene	gene1618	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08095
RY45_08100	RY45_08100		RY45_08100	1729102	1729452	+	hypothetical protein		gene	gene1619	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08100
RY45_08105	RY45_08105		RY45_08105	1729449	1730282	-	chemotaxis protein		gene	gene1620	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08105
RY45_08110	RY45_08110		RY45_08110	1730418	1731692	-	adenosylmethionine-8-amino-7-oxononanoate aminotransferase		gene	gene1621	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08110
RY45_08115	RY45_08115		RY45_08115	1731884	1732972	+	biotin synthase	catalyzes the formation of biotin from dethiobiotin	gene	gene1622	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08115
RY45_08120	RY45_08120		RY45_08120	1732969	1734165	+	8-amino-7-oxononanoate synthase		gene	gene1623	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08120
RY45_08125	RY45_08125		RY45_08125	1734155	1734958	+	biotin biosynthesis protein BioC		gene	gene1624	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08125
RY45_08130	RY45_08130	bioD	bioD	1735041	1735721	+	dethiobiotin synthetase	DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium	gene	gene1625	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08130
RY45_08135	RY45_08135		RY45_08135	1735834	1736706	+	heat shock protein HtpX		gene	gene1626	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08135
RY45_08140	RY45_08140		RY45_08140	1736766	1738478	-	chemotaxis protein		gene	gene1627	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08140
RY45_08145	RY45_08145		RY45_08145	1738701	1740515	-	flavodoxin		gene	gene1628	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08145
RY45_08150	RY45_08150		RY45_08150	1740906	1742552	+	glutamate synthase	unknown function	gene	gene1629	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08150
RY45_08155	RY45_08155		RY45_08155	1742549	1746124	+	pyruvate-flavodoxin oxidoreductase		gene	gene1630	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08155
RY45_08160	RY45_08160		RY45_08160	1747057	1747272	-	hypothetical protein		gene	gene1631	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08160
RY45_08165	RY45_08165		RY45_08165	1747559	1748149	-	hypothetical protein		gene	gene1632	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08165
RY45_08170	RY45_08170		RY45_08170	1748161	1749507	-	multidrug transporter MatE		gene	gene1633	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08170
RY45_08175	RY45_08175		RY45_08175	1749654	1751477	-	sulfate permease		gene	gene1634	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08175
RY45_08180	RY45_08180		RY45_08180	1751548	1752168	-	hypothetical protein		gene	gene1635	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08180
RY45_08185	RY45_08185		RY45_08185	1752158	1752415	-	hypothetical protein		gene	gene1636	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08185
RY45_08190	RY45_08190		RY45_08190	1752550	1753455	+	cysteine synthase		gene	gene1637	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08190
RY45_08195	RY45_08195		RY45_08195	1753621	1753902	+	hypothetical protein		gene	gene1638	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08195
RY45_08200	RY45_08200		RY45_08200	1753936	1755120	-	alcohol dehydrogenase		gene	gene1639	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08200
RY45_08205	RY45_08205		RY45_08205	1755138	1755653	-	hypothetical protein		gene	gene1640	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08205
RY45_08210	RY45_08210		RY45_08210	1755634	1756236	-	TetR family transcriptional regulator		gene	gene1641	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08210
RY45_08215	RY45_08215		RY45_08215	1756247	1757677	-	coniferyl aldehyde dehydrogenase		gene	gene1642	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08215
RY45_08220	RY45_08220		RY45_08220	1757889	1758182	+	hypothetical protein		gene	gene1643	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08220
RY45_08225	RY45_08225		RY45_08225	1758241	1758690	-	peptidase P60		gene	gene1644	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08225
RY45_08230	RY45_08230		RY45_08230	1759545	1761410	+	hemolysin		gene	gene1645	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08230
RY45_08235	RY45_08235		RY45_08235	1761477	1762385	-	LysR family transcriptional regulator		gene	gene1646	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08235
RY45_08240	RY45_08240		RY45_08240	1762532	1763134	+	peroxidase		gene	gene1647	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08240
RY45_08245	RY45_08245		RY45_08245	1763358	1764323	-	alpha-L-glutamate ligase		gene	gene1648	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08245
RY45_08250	RY45_08250		RY45_08250	1764327	1765865	-	gonadoliberin III		gene	gene1649	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08250
RY45_08255	RY45_08255		RY45_08255	1765869	1766657	-	ATP-dependent Zn protease		gene	gene1650	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08255
RY45_08260	RY45_08260		RY45_08260	1766710	1767687	-	tRNA methyltransferase	catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA	gene	gene1651	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08260
RY45_08265	RY45_08265		RY45_08265	1767684	1768433	-	tRNA methyltransferase		gene	gene1652	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08265
RY45_08270	RY45_08270		RY45_08270	1768827	1769675	-	hypothetical protein		gene	gene1653	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08270
RY45_08275	RY45_08275		RY45_08275	1770108	1771874	+	aspartyl-tRNA synthetase		gene	gene1654	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08275
RY45_08280	RY45_08280		RY45_08280	1771970	1772710	+	hypothetical protein		gene	gene1655	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08280
RY45_08285	RY45_08285		RY45_08285	1772992	1774608	+	hydrolase		gene	gene1656	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08285
RY45_08290	RY45_08290		RY45_08290	1774678	1775892	-	transcriptional regulator	regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon	gene	gene1657	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08290
RY45_08295	RY45_08295	nagA	nagA	1775897	1777042	-	N-acetylglucosamine-6-phosphate deacetylase	catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate	gene	gene1658	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08295
RY45_08300	RY45_08300	nagB	nagB	1777052	1777852	-	glucosamine-6-phosphate deaminase	catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate	gene	gene1659	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08300
RY45_08305	RY45_08305		RY45_08305	1778126	1779580	+	PTS glucose transporter subunit IIBC		gene	gene1660	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08305
RY45_08310	RY45_08310		RY45_08310	1779703	1782366	+	beta-N-acetylhexosaminidase		gene	gene1661	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08310
RY45_08315	RY45_08315		RY45_08315	1782714	1784375	+	glutamate--tRNA ligase	catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA	gene	gene1662	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08315
RY45_08320	RY45_08320	fur	fur	1784619	1785047	-	ferric uptake regulator	negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer	gene	gene1663	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08320
RY45_08325	RY45_08325		RY45_08325	1785292	1785774	+	translation elongation factor P (EF-P)		gene	gene1664	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08325
RY45_08330	RY45_08330		RY45_08330	1785835	1786359	-	flavodoxin FldA	An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group	gene	gene1665	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08330
RY45_08335	RY45_08335		RY45_08335	1786399	1786695	-	LexA regulated protein		gene	gene1666	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08335
RY45_08340	RY45_08340		RY45_08340	1786716	1786937	-	membrane protein		gene	gene1667	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08340
RY45_08345	RY45_08345		RY45_08345	1786993	1787757	-	esterase		gene	gene1668	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08345
RY45_08350	RY45_08350		RY45_08350	1788050	1788559	+	replication initiation regulator SeqA	negative modulator of the initiation of chromosome replication	gene	gene1669	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08350
RY45_08355	RY45_08355		RY45_08355	1788617	1790266	+	phosphoglucomutase	catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate	gene	gene1670	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08355
RY45_08360	RY45_08360		RY45_08360	1790351	1791232	-	membrane protein		gene	gene1671	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08360
RY45_08365	RY45_08365		RY45_08365	1791329	1791811	+	MarR family transcriptional regulator		gene	gene1672	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08365
RY45_08370	RY45_08370		RY45_08370	1791836	1792426	-	TetR family transcriptional regulator		gene	gene1673	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08370
RY45_08375	RY45_08375		RY45_08375	1792539	1793204	+	peroxiredoxin		gene	gene1674	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08375
RY45_08380	RY45_08380		RY45_08380	1793282	1794385	-	murein hydrolase effector LrgB	membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan	gene	gene1675	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08380
RY45_08385	RY45_08385		RY45_08385	1794481	1795083	-	membrane protein		gene	gene1676	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08385
RY45_08390	RY45_08390		RY45_08390	1795098	1795736	-	ABC transporter ATP-binding protein		gene	gene1677	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08390
RY45_08395	RY45_08395		RY45_08395	1795760	1797436	-	ABC transporter permease		gene	gene1678	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08395
RY45_08400	RY45_08400		RY45_08400	1797436	1798620	-	hypothetical protein		gene	gene1679	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08400
RY45_08405	RY45_08405		RY45_08405	1798626	1800794	-	pyridine nucleotide-disulfide oxidoreductase		gene	gene1680	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08405
RY45_08410	RY45_08410		RY45_08410	1800794	1801375	-	alkylhydroperoxidase		gene	gene1681	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08410
RY45_08415	RY45_08415		RY45_08415	1801387	1802061	-	hypothetical protein		gene	gene1682	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08415
RY45_08420	RY45_08420		RY45_08420	1802113	1802673	+	peptide methionine sulfoxide reductase		gene	gene1683	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08420
RY45_08425	RY45_08425		RY45_08425	1802688	1802966	-	peptidylprolyl isomerase	rotamase C%3B accelerates isomerization of the peptidyl prolyl bond	gene	gene1684	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08425
RY45_08430	RY45_08430		RY45_08430	1803048	1803422	-	hypothetical protein		gene	gene1685	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08430
RY45_08435	RY45_08435		RY45_08435	1803975	1805750	+	membrane protein		gene	gene1686	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08435
RY45_08440	RY45_08440		RY45_08440	1805960	1809745	+	hypothetical protein		gene	gene1687	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08440
RY45_08445	RY45_08445		RY45_08445	1809884	1809968	-	tRNA-Tyr		tRNA	gene1688	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08445
RY45_08450	RY45_08450		RY45_08450	1810020	1810104	-	tRNA-Tyr		tRNA	gene1689	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08450
RY45_08455	RY45_08455		RY45_08455	1810230	1810745	+	hypothetical protein		gene	gene1690	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08455
RY45_08460	RY45_08460		RY45_08460	1810827	1811165	-	cold-shock protein		gene	gene1691	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08460
RY45_08465	RY45_08465		RY45_08465	1811537	1814053	+	diguanylate phosphodiesterase		gene	gene1692	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08465
RY45_08470	RY45_08470		RY45_08470	1814138	1816054	+	lytic transglycosylase		gene	gene1693	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08470
RY45_08475	RY45_08475		RY45_08475	1816234	1817232	+	repressor		gene	gene1694	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08475
RY45_08480	RY45_08480		RY45_08480	1817492	1818304	+	NAD-dependent epimerase		gene	gene1695	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08480
RY45_08485	RY45_08485		RY45_08485	1818446	1818841	+	acyl-CoA thioester hydrolase		gene	gene1696	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08485
RY45_08490	RY45_08490		RY45_08490	1818848	1819072	-	hypothetical protein		gene	gene1697	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08490
RY45_08495	RY45_08495		RY45_08495	1819184	1820029	+	endonuclease		gene	gene1698	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08495
RY45_08500	RY45_08500		RY45_08500	1820116	1821663	-	lytic transglycosylase		gene	gene1699	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08500
RY45_08505	RY45_08505		RY45_08505	1821734	1822498	-	hydroxyacylglutathione hydrolase		gene	gene1700	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08505
RY45_08510	RY45_08510		RY45_08510	1822570	1823292	+	SAM-dependent methyltransferase		gene	gene1701	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08510
RY45_08515	RY45_08515		RY45_08515	1823340	1823804	-	ribonuclease H		gene	gene1702	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08515
RY45_08520	RY45_08520		RY45_08520	1823857	1824591	+	DNA polymerase III subunit epsilon	3'-5' exonuclease of DNA polymerase III	gene	gene1703	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08520
RY45_08525	RY45_08525		RY45_08525	1824588	1825853	+	hypothetical protein		gene	gene1704	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08525
RY45_08530	RY45_08530		RY45_08530	1825917	1827407	-	exopolyphosphatase		gene	gene1705	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08530
RY45_08535	RY45_08535		RY45_08535	1827397	1829466	-	polyphosphate kinase		gene	gene1706	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08535
RY45_08540	RY45_08540		RY45_08540	1829542	1830054	-	glycine cleavage system protein R		gene	gene1707	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08540
RY45_08545	RY45_08545		RY45_08545	1830266	1831138	+	topoisomerase		gene	gene1708	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08545
RY45_08550	RY45_08550		RY45_08550	1831417	1832838	+	Fis family transcriptional regulator		gene	gene1709	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08550
RY45_08555	RY45_08555		RY45_08555	1832945	1833979	+	histidine kinase		gene	gene1710	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08555
RY45_08560	RY45_08560		RY45_08560	1834041	1835384	+	Fis family transcriptional regulator		gene	gene1711	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08560
RY45_08565	RY45_08565		RY45_08565	1835532	1836293	+	metal-binding protein		gene	gene1712	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08565
RY45_08570	RY45_08570	purN	purN	1836412	1837050	-	phosphoribosylglycinamide formyltransferase	glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate	gene	gene1713	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08570
RY45_08575	RY45_08575		RY45_08575	1837083	1838120	-	phosphoribosylaminoimidazole synthetase	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis	gene	gene1714	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08575
RY45_08580	RY45_08580	upp	upp	1838296	1838922	+	uracil phosphoribosyltransferase	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate	gene	gene1715	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08580
RY45_08585	RY45_08585		RY45_08585	1839066	1840094	+	hypothetical protein		gene	gene1716	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08585
RY45_08590	RY45_08590		RY45_08590	1840309	1841010	+	DNA replication initiation factor	controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP	gene	gene1717	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08590
RY45_08595	RY45_08595		RY45_08595	1841123	1842436	-	isocitrate lyase		gene	gene1718	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08595
RY45_08600	RY45_08600		RY45_08600	1842512	1844119	-	malate synthase	Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle	gene	gene1719	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08600
RY45_08605	RY45_08605		RY45_08605	1845268	1845344	-	tRNA-Pro		tRNA	gene1720	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08605
RY45_08610	RY45_08610		RY45_08610	1845644	1846156	+	tRNA adenosine deaminase		gene	gene1721	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08610
RY45_08615	RY45_08615		RY45_08615	1846363	1848600	+	phosphate ABC transporter permease		gene	gene1722	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08615
RY45_08620	RY45_08620	phosphate ABC transporter permease	phosphate ABC transporter permease	1848633	1850283	+		disrupted	pseudogene	gene1723	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08620
RY45_08625	RY45_08625		RY45_08625	1850393	1851211	+	phosphate ABC transporter ATP-binding protein		gene	gene1724	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08625
RY45_08630	RY45_08630		RY45_08630	1851308	1852018	+	transcriptional regulator PhoU	regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon	gene	gene1725	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08630
RY45_08635	RY45_08635		RY45_08635	1852249	1852488	-	hypothetical protein		gene	gene1726	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08635
RY45_08640	RY45_08640		RY45_08640	1852485	1853609	-	hypothetical protein		gene	gene1727	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08640
RY45_08645	RY45_08645		RY45_08645	1854834	1855256	+	transposase		gene	gene1728	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08645
RY45_08650	RY45_08650		RY45_08650	1855608	1856927	+	membrane protein		gene	gene1729	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08650
RY45_08655	RY45_08655		RY45_08655	1856947	1857489	+	hypothetical protein		gene	gene1730	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08655
RY45_08660	RY45_08660		RY45_08660	1857756	1858658	+	homocysteine methyltransferase		gene	gene1731	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08660
RY45_08665	RY45_08665		RY45_08665	1858668	1860068	+	arginine:ornithine antiporter		gene	gene1732	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08665
RY45_08670	RY45_08670	sterol desaturase	sterol desaturase	1860137	1860975	-		disrupted	pseudogene	gene1733	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08670
RY45_08675	RY45_08675		RY45_08675	1861206	1861973	+	amino acid ABC transporter substrate-binding protein		gene	gene1734	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08675
RY45_08680	RY45_08680		RY45_08680	1862078	1862821	-	peptide ABC transporter ATP-binding protein		gene	gene1735	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08680
RY45_08685	RY45_08685		RY45_08685	1862805	1863764	-	ABC transporter permease		gene	gene1736	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08685
RY45_08690	RY45_08690		RY45_08690	1863855	1864643	-	amino acid ABC transporter substrate-binding protein		gene	gene1737	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08690
RY45_08695	RY45_08695		RY45_08695	1865145	1866284	+	diguanylate cyclase		gene	gene1738	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08695
RY45_08700	RY45_08700		RY45_08700	1866289	1867617	-	MFS transporter		gene	gene1739	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08700
RY45_08705	RY45_08705		RY45_08705	1867645	1869165	-	histidine kinase	Member of the two-component regulatory system UhpB/UhpA involved in the regulation of the uptake of hexose ph	gene	gene1740	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08705
RY45_08710	RY45_08710		RY45_08710	1869162	1869752	-	transcriptional regulator	response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter	gene	gene1741	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08710
RY45_08715	RY45_08715		RY45_08715	1869942	1870337	-	nucleoside diphosphate kinase regulator	Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis%2C CTP for lipid synthesis%2C and GTP for protein elongation	gene	gene1742	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08715
RY45_08720	RY45_08720		RY45_08720	1870323	1870529	+	hypothetical protein		gene	gene1743	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08720
RY45_08725	RY45_08725		RY45_08725	1870569	1871339	-	ABC transporter substrate-binding protein		gene	gene1744	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08725
RY45_08730	RY45_08730		RY45_08730	1871381	1872064	-	hypothetical protein		gene	gene1745	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08730
RY45_08735	RY45_08735		RY45_08735	1872118	1873500	-	alkaline phosphatase		gene	gene1746	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08735
RY45_08740	RY45_08740		RY45_08740	1873536	1874927	-	alkaline phosphatase		gene	gene1747	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08740
RY45_08745	RY45_08745		RY45_08745	1875260	1876210	+	GTPase		gene	gene1748	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08745
RY45_08750	RY45_08750		RY45_08750	1876585	1877733	+	MFS transporter		gene	gene1749	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08750
RY45_08755	RY45_08755		RY45_08755	1877913	1878809	-	histone deacetylase		gene	gene1750	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08755
RY45_08760	RY45_08760		RY45_08760	1878894	1879553	-	hypothetical protein		gene	gene1751	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08760
RY45_08765	RY45_08765		RY45_08765	1879727	1881799	-	ATP-dependent DNA helicase DinG		gene	gene1752	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08765
RY45_08770	RY45_08770		RY45_08770	1882181	1883302	+	porin		gene	gene1753	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08770
RY45_08775	RY45_08775		RY45_08775	1883533	1884474	+	hypothetical protein		gene	gene1754	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08775
RY45_08780	RY45_08780		RY45_08780	1884650	1885840	+	aromatic amino acid aminotransferase		gene	gene1755	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08780
RY45_08785	RY45_08785	molybdopterin-synthase adenylyltransferase	molybdopterin-synthase adenylyltransferase	1885943	1886699	-		disrupted	pseudogene	gene1756	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08785
RY45_08790	RY45_08790		RY45_08790	1886696	1887922	-	molybdopterin molybdenumtransferase		gene	gene1757	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08790
RY45_08795	RY45_08795	folE	folE	1888228	1888884	+	GTP cyclohydrolase	involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer	gene	gene1758	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08795
RY45_08800	RY45_08800		RY45_08800	1889297	1890952	+	chemotaxis protein		gene	gene1759	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08800
RY45_08805	RY45_08805		RY45_08805	1891222	1892952	-	formate--tetrahydrofolate ligase	catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate	gene	gene1760	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08805
RY45_08810	RY45_08810		RY45_08810	1893019	1893435	+	hypothetical protein		gene	gene1761	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08810
RY45_08815	RY45_08815		RY45_08815	1893467	1894369	-	LysR family transcriptional regulator		gene	gene1762	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08815
RY45_08820	RY45_08820		RY45_08820	1894480	1895040	+	hypothetical protein		gene	gene1763	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08820
RY45_08825	RY45_08825		RY45_08825	1895040	1895777	+	hypothetical protein		gene	gene1764	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08825
RY45_08830	RY45_08830		RY45_08830	1895964	1897085	+	adenosylhomocysteinase		gene	gene1765	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08830
RY45_08835	RY45_08835		RY45_08835	1897123	1897434	+	selenoprotein W-like protein		gene	gene1766	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08835
RY45_08840	RY45_08840		RY45_08840	1897499	1899223	-	acyltransferase		gene	gene1767	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08840
RY45_08845	RY45_08845		RY45_08845	1899366	1900589	-	peptidase T		gene	gene1768	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08845
RY45_08850	RY45_08850		RY45_08850	1901372	1901629	-	hypothetical protein		gene	gene1769	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08850
RY45_08855	RY45_08855		RY45_08855	1901657	1903558	+	arginine decarboxylase	catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis	gene	gene1770	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08855
RY45_08860	RY45_08860		RY45_08860	1903844	1904032	+	hypothetical protein		gene	gene1771	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08860
RY45_08865	RY45_08865		RY45_08865	1904098	1904388	-	hypothetical protein		gene	gene1772	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08865
RY45_08870	RY45_08870		RY45_08870	1904675	1906681	-	chemotaxis protein		gene	gene1773	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08870
RY45_08875	RY45_08875		RY45_08875	1906871	1908166	-	membrane protein		gene	gene1774	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08875
RY45_08880	RY45_08880		RY45_08880	1908415	1908798	+	regulator		gene	gene1775	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08880
RY45_08885	RY45_08885		RY45_08885	1908821	1910110	+	membrane protein		gene	gene1776	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08885
RY45_08890	RY45_08890		RY45_08890	1910169	1910822	+	hypothetical protein		gene	gene1777	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08890
RY45_08895	RY45_08895		RY45_08895	1910966	1911553	+	histidine phosphatase		gene	gene1778	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08895
RY45_08900	RY45_08900		RY45_08900	1911612	1912352	-	HNH endonuclease		gene	gene1779	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08900
RY45_08905	RY45_08905		RY45_08905	1912546	1913013	+	hypothetical protein		gene	gene1780	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08905
RY45_08910	RY45_08910		RY45_08910	1913167	1913535	+	glyoxalase		gene	gene1781	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08910
RY45_08915	RY45_08915		RY45_08915	1913659	1915242	-	membrane protein		gene	gene1782	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08915
RY45_08920	RY45_08920		RY45_08920	1915441	1916787	-	glutamate dehydrogenase	converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer	gene	gene1783	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08920
RY45_08925	RY45_08925		RY45_08925	1917407	1918441	+	pseudouridine synthase		gene	gene1784	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08925
RY45_08930	RY45_08930		RY45_08930	1918515	1919750	-	major facilitator transporter		gene	gene1785	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08930
RY45_08935	RY45_08935		RY45_08935	1919743	1920246	-	CMP deaminase		gene	gene1786	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08935
RY45_08940	RY45_08940		RY45_08940	1920357	1921205	+	LysR family transcriptional regulator		gene	gene1787	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08940
RY45_08945	RY45_08945		RY45_08945	1921228	1922430	-	major facilitator transporter		gene	gene1788	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08945
RY45_08950	RY45_08950		RY45_08950	1922542	1923009	-	transcriptional regulator		gene	gene1789	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08950
RY45_08955	RY45_08955		RY45_08955	1923286	1923756	-	acyl-CoA hydrolase		gene	gene1790	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08955
RY45_08960	RY45_08960		RY45_08960	1923777	1924076	-	hypothetical protein		gene	gene1791	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08960
RY45_08965	RY45_08965		RY45_08965	1924073	1924921	-	membrane protein		gene	gene1792	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08965
RY45_08970	RY45_08970		RY45_08970	1924985	1925635	+	membrane protein		gene	gene1793	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08970
RY45_08975	RY45_08975		RY45_08975	1925672	1927111	-	GntR family transcriptional regulator		gene	gene1794	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08975
RY45_08980	RY45_08980		RY45_08980	1927232	1928803	+	cytochrome d terminal oxidase subunit 1	part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone	gene	gene1795	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08980
RY45_08985	RY45_08985		RY45_08985	1928803	1929930	+	cytochrome d ubiquinol oxidase subunit 2		gene	gene1796	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08985
RY45_08990	RY45_08990		RY45_08990	1929958	1930071	+	toxin-antitoxin system%2C toxin component		gene	gene1797	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08990
RY45_08995	RY45_08995		RY45_08995	1930135	1931307	-	MFS sugar transporter		gene	gene1798	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_08995
RY45_09000	RY45_09000		RY45_09000	1931682	1932485	-	aldo/keto reductase		gene	gene1799	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09000
RY45_09005	RY45_09005		RY45_09005	1932533	1932829	-	antibiotic biosynthesis monooxygenase		gene	gene1800	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09005
RY45_09010	RY45_09010		RY45_09010	1933685	1934047	-	glyoxalase		gene	gene1801	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09010
RY45_09015	RY45_09015		RY45_09015	1934034	1934432	-	hypothetical protein		gene	gene1802	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09015
RY45_09020	RY45_09020		RY45_09020	1934626	1935528	+	LysR family transcriptional regulator		gene	gene1803	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09020
RY45_09025	RY45_09025	glpK	glpK	1935694	1937196	-	glycerol kinase	Converts glycerol and ADP to glycerol-3-phosphate and ADP	gene	gene1804	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09025
RY45_09030	RY45_09030		RY45_09030	1937251	1938099	-	glycerol uptake facilitator GlpF	involved in the transport of glycerol into the cell	gene	gene1805	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09030
RY45_09035	RY45_09035	glpT	glpT	1938587	1939942	+	sn-glycerol-3-phosphate transporter	catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell	gene	gene1806	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09035
RY45_09040	RY45_09040		RY45_09040	1940044	1940802	+	transcriptional regulator	represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism	gene	gene1807	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09040
RY45_09045	RY45_09045	glpD	glpD	1941124	1942611	+	glycerol-3-phosphate dehydrogenase	in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane	gene	gene1808	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09045
RY45_09050	RY45_09050	glpQ	glpQ	1942714	1943793	+	glycerophosphodiester phosphodiesterase	hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols%3B periplasmic	gene	gene1809	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09050
RY45_09055	RY45_09055		RY45_09055	1943850	1944812	-	transposase		gene	gene1810	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09055
RY45_09060	RY45_09060		RY45_09060	1945152	1946225	+	phospho-2-dehydro-3-deoxyheptonate aldolase	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive	gene	gene1811	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09060
RY45_09065	RY45_09065	tyrA	tyrA	1946344	1947483	+	chorismate mutase	catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis	gene	gene1812	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09065
RY45_09070	RY45_09070		RY45_09070	1947556	1948431	-	transcriptional regulator		gene	gene1813	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09070
RY45_09075	RY45_09075		RY45_09075	1948431	1948793	-	hypothetical protein		gene	gene1814	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09075
RY45_09080	RY45_09080		RY45_09080	1949096	1949578	-	ecotin		gene	gene1815	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09080
RY45_09085	RY45_09085		RY45_09085	1949810	1950367	-	hypothetical protein		gene	gene1816	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09085
RY45_09090	RY45_09090		RY45_09090	1950364	1951737	-	hypothetical protein		gene	gene1817	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09090
RY45_09095	RY45_09095		RY45_09095	1951798	1954212	-	peptidase M36		gene	gene1818	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09095
RY45_09100	RY45_09100		RY45_09100	1954245	1956323	-	peptidase S9		gene	gene1819	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09100
RY45_09105	RY45_09105		RY45_09105	1956323	1958485	-	ligand-gated channel protein		gene	gene1820	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09105
RY45_09110	RY45_09110		RY45_09110	1958792	1960642	-	alkaline phosphatase		gene	gene1821	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09110
RY45_09115	RY45_09115		RY45_09115	1960686	1960913	-	hypothetical protein		gene	gene1822	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09115
RY45_09120	RY45_09120		RY45_09120	1960987	1962036	+	nucleoid-associated protein		gene	gene1823	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09120
RY45_09125	RY45_09125	malE	malE	1962432	1963613	+	sugar ABC transporter substrate-binding protein	functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis	gene	gene1824	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09125
RY45_09130	RY45_09130	malF	malF	1963689	1965341	+	maltose transporter membrane protein	with MalKGE is involved in maltose transport into the cell	gene	gene1825	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09130
RY45_09135	RY45_09135	malG	malG	1965354	1966244	+	maltose transporter permease	with MalKFE is involved in the transport of maltose into the cell	gene	gene1826	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09135
RY45_09140	RY45_09140		RY45_09140	1966314	1967450	+	ABC transporter		gene	gene1827	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09140
RY45_09145	RY45_09145		RY45_09145	1967566	1968381	-	polyphosphate kinase		gene	gene1828	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09145
RY45_09150	RY45_09150		RY45_09150	1968494	1969294	+	2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase		gene	gene1829	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09150
RY45_09155	RY45_09155		RY45_09155	1969367	1970173	-	structural protein MipA		gene	gene1830	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09155
RY45_09160	RY45_09160		RY45_09160	1970209	1971279	-	permase		gene	gene1831	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09160
RY45_09165	RY45_09165		RY45_09165	1971295	1971537	-	SirA family protein		gene	gene1832	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09165
RY45_09170	RY45_09170		RY45_09170	1971687	1973120	+	peptidase M48		gene	gene1833	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09170
RY45_09175	RY45_09175		RY45_09175	1973240	1973722	-	thioredoxin		gene	gene1834	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09175
RY45_09180	RY45_09180		RY45_09180	1973783	1974133	+	arsenate reductase		gene	gene1835	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09180
RY45_09185	RY45_09185		RY45_09185	1974130	1974525	+	membrane protein		gene	gene1836	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09185
RY45_09190	RY45_09190		RY45_09190	1974821	1975891	+	choloylglycine hydrolase		gene	gene1837	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09190
RY45_09195	RY45_09195		RY45_09195	1975928	1976548	-	hypothetical protein		gene	gene1838	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09195
RY45_09200	RY45_09200		RY45_09200	1976725	1977855	+	isoaspartyl dipeptidase		gene	gene1839	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09200
RY45_09205	RY45_09205		RY45_09205	1977962	1978864	-	membrane protein		gene	gene1840	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09205
RY45_09210	RY45_09210		RY45_09210	1979398	1980168	+	amino acid transporter		gene	gene1841	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09210
RY45_09215	RY45_09215		RY45_09215	1980234	1981007	+	nickel transporter		gene	gene1842	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09215
RY45_09220	RY45_09220		RY45_09220	1981212	1981952	+	ABC transporter		gene	gene1843	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09220
RY45_09225	RY45_09225		RY45_09225	1981956	1982648	+	amino acid ABC transporter permease	with HisJPQ is involved in transport of histidine%2C lysine%2C arginine and ornithine	gene	gene1844	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09225
RY45_09230	RY45_09230		RY45_09230	1982700	1983341	-	hypothetical protein		gene	gene1845	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09230
RY45_09235	RY45_09235	pflA	pflA	1983428	1984246	-	pyruvate formate lyase-activating enzyme 1	activates pyruvate formate-lyase 1 under anaerobic conditions	gene	gene1846	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09235
RY45_09240	RY45_09240		RY45_09240	1984312	1987290	-	diguanylate phosphodiesterase		gene	gene1847	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09240
RY45_09245	RY45_09245		RY45_09245	1987386	1989074	+	CoA-disulfide reductase		gene	gene1848	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09245
RY45_09250	RY45_09250		RY45_09250	1989240	1994129	+	alpha-2-macroglobulin		gene	gene1849	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09250
RY45_09255	RY45_09255		RY45_09255	1994095	1996503	+	penicillin-binding protein		gene	gene1850	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09255
RY45_09260	RY45_09260		RY45_09260	1996605	1997564	-	hypothetical protein		gene	gene1851	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09260
RY45_09265	RY45_09265		RY45_09265	1997743	1999191	+	tRNA s(4)U8 sulfurtransferase	catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety	gene	gene1852	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09265
RY45_09270	RY45_09270		RY45_09270	1999269	1999661	-	hypothetical protein		gene	gene1853	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09270
RY45_09275	RY45_09275		RY45_09275	1999762	2000394	-	membrane protein		gene	gene1854	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09275
RY45_09280	RY45_09280		RY45_09280	2000811	2001722	+	flagellin		gene	gene1855	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09280
RY45_09285	RY45_09285		RY45_09285	2002300	2003205	+	flagellin		gene	gene1856	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09285
RY45_09290	RY45_09290		RY45_09290	2003244	2003684	+	flagellin		gene	gene1857	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09290
RY45_09295	RY45_09295		RY45_09295	2003711	2005117	+	flagellar hook protein FliD		gene	gene1858	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09295
RY45_09300	RY45_09300		RY45_09300	2005143	2005565	+	flagellar protein FliS		gene	gene1859	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09300
RY45_09305	RY45_09305		RY45_09305	2005562	2005861	+	hypothetical protein		gene	gene1860	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09305
RY45_09310	RY45_09310		RY45_09310	2005869	2007956	+	hypothetical protein		gene	gene1861	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09310
RY45_09315	RY45_09315		RY45_09315	2008045	2008866	-	ABC transporter substrate-binding protein		gene	gene1862	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09315
RY45_09320	RY45_09320		RY45_09320	2008859	2009809	-	cobalamin biosynthesis protein CobD		gene	gene1863	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09320
RY45_09325	RY45_09325		RY45_09325	2009806	2010498	-	5'-methylthioadenosine nucleosidase	enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine	gene	gene1864	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09325
RY45_09330	RY45_09330		RY45_09330	2010606	2011364	-	hypothetical protein		gene	gene1865	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09330
RY45_09335	RY45_09335		RY45_09335	2011459	2012391	-	membrane protein		gene	gene1866	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09335
RY45_09340	RY45_09340		RY45_09340	2012769	2014400	+	chemotaxis protein		gene	gene1867	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09340
RY45_09345	RY45_09345		RY45_09345	2014860	2015663	-	inositol monophosphatase		gene	gene1868	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09345
RY45_09350	RY45_09350		RY45_09350	2015865	2016320	+	hypothetical protein		gene	gene1869	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09350
RY45_09355	RY45_09355		RY45_09355	2016512	2017174	+	glutathione S-transferase		gene	gene1870	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09355
RY45_09360	RY45_09360		RY45_09360	2017425	2018624	+	major facilitator transporter		gene	gene1871	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09360
RY45_09365	RY45_09365		RY45_09365	2018990	2019322	-	cell division protein ZapA		gene	gene1872	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09365
RY45_09370	RY45_09370		RY45_09370	2019496	2020065	+	hypothetical protein		gene	gene1873	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09370
RY45_09375	RY45_09375		RY45_09375	2020251	2021468	+	2-polyprenyl-6-methoxyphenol hydroxylase		gene	gene1874	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09375
RY45_09380	RY45_09380		RY45_09380	2021557	2022792	+	oxidoreductase		gene	gene1875	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09380
RY45_09385	RY45_09385	gcvT	gcvT	2023271	2024368	+	glycine cleavage system protein T	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein	gene	gene1876	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09385
RY45_09390	RY45_09390		RY45_09390	2024475	2024864	+	glycine cleavage system protein H	part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor	gene	gene1877	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09390
RY45_09395	RY45_09395		RY45_09395	2025116	2027992	+	glycine dehydrogenase	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine	gene	gene1878	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09395
RY45_09400	RY45_09400		RY45_09400	2028107	2029180	-	transporter		gene	gene1879	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09400
RY45_09405	RY45_09405		RY45_09405	2029287	2029583	+	ArsR family transcriptional regulator		gene	gene1880	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09405
RY45_09410	RY45_09410		RY45_09410	2029670	2030038	+	ArsR family transcriptional regulator		gene	gene1881	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09410
RY45_09415	RY45_09415		RY45_09415	2030042	2030470	+	arsenic resistance operon repressor		gene	gene1882	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09415
RY45_09420	RY45_09420		RY45_09420	2030538	2032337	+	arsenic ABC transporter ATPase		gene	gene1883	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09420
RY45_09425	RY45_09425		RY45_09425	2032394	2033470	+	arsenic resistance protein ArsB		gene	gene1884	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09425
RY45_09430	RY45_09430		RY45_09430	2033467	2033898	+	arsenate reductase		gene	gene1885	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09430
RY45_09435	RY45_09435		RY45_09435	2034039	2034788	+	SAM-dependent methyltransferase		gene	gene1886	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09435
RY45_09440	RY45_09440		RY45_09440	2034900	2035145	-	hypothetical protein		gene	gene1887	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09440
RY45_09445	RY45_09445		RY45_09445	2035311	2036603	+	major facilitator transporter		gene	gene1888	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09445
RY45_09450	RY45_09450		RY45_09450	2036670	2038250	-	NADH dehydrogenase		gene	gene1889	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09450
RY45_09455	RY45_09455		RY45_09455	2038344	2038910	-	alkyl hydroperoxide reductase		gene	gene1890	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09455
RY45_09460	RY45_09460		RY45_09460	2039573	2040019	-	acetoin utilization protein AcuB		gene	gene1891	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09460
RY45_09465	RY45_09465		RY45_09465	2040232	2041299	+	S-adenosylmethionine tRNA ribosyltransferase		gene	gene1892	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09465
RY45_09470	RY45_09470	tgt	tgt	2041370	2042506	+	queuine tRNA-ribosyltransferase	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr)	gene	gene1893	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09470
RY45_09475	RY45_09475	yajC	yajC	2042557	2042892	+	preprotein translocase subunit YajC	member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex	gene	gene1894	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09475
RY45_09480	RY45_09480	secD	secD	2042911	2044764	+	preprotein translocase subunit SecD	part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane	gene	gene1895	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09480
RY45_09485	RY45_09485		RY45_09485	2044774	2045721	+	preprotein translocase subunit SecF		gene	gene1896	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09485
RY45_09490	RY45_09490		RY45_09490	2045821	2046189	+	sulfurtransferase		gene	gene1897	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09490
RY45_09495	RY45_09495		RY45_09495	2046334	2047227	+	lipoprotein NlpI	lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing	gene	gene1898	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09495
RY45_09500	RY45_09500		RY45_09500	2047345	2048217	-	protease		gene	gene1899	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09500
RY45_09505	RY45_09505		RY45_09505	2048230	2049225	-	protease		gene	gene1900	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09505
RY45_09510	RY45_09510		RY45_09510	2049416	2049955	+	lipid carrier protein		gene	gene1901	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09510
RY45_09515	RY45_09515		RY45_09515	2049902	2050318	-	hypothetical protein		gene	gene1902	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09515
RY45_09520	RY45_09520		RY45_09520	2050498	2051223	+	tRNA (cytidine/uridine-2'-O-)-methyltransferase	catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA	gene	gene1903	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09520
RY45_09525	RY45_09525		RY45_09525	2051317	2051820	+	transcriptional regulator		gene	gene1904	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09525
RY45_09530	RY45_09530		RY45_09530	2051878	2053092	+	cysteine desulfurase		gene	gene1905	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09530
RY45_09535	RY45_09535		RY45_09535	2053133	2053516	+	scaffolding protein		gene	gene1906	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09535
RY45_09540	RY45_09540	iscA	iscA	2053532	2053855	+	iron-sulfur cluster assembly protein	forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein	gene	gene1907	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09540
RY45_09545	RY45_09545		RY45_09545	2053978	2054496	+	cobalamin 5'-phosphate synthase		gene	gene1908	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09545
RY45_09550	RY45_09550	hscA	hscA	2054525	2056372	+	chaperone protein HscA	involved in the maturation of iron-sulfur cluster-containing proteins	gene	gene1909	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09550
RY45_09555	RY45_09555		RY45_09555	2056374	2056712	+	2Fe-2S ferredoxin		gene	gene1910	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09555
RY45_09560	RY45_09560		RY45_09560	2056870	2058171	+	aminopeptidase B	catalyzes the removal of an N-terminal amino acid from a peptide or arylamide	gene	gene1911	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09560
RY45_09565	RY45_09565		RY45_09565	2058168	2059451	+	aminopeptidase B	catalyzes the removal of an N-terminal amino acid from a peptide or arylamide	gene	gene1912	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09565
RY45_09570	RY45_09570		RY45_09570	2059721	2060149	+	nucleoside diphosphate kinase	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate	gene	gene1913	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09570
RY45_09575	RY45_09575		RY45_09575	2060318	2061421	+	ribosomal RNA large subunit methyltransferase N	23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance	gene	gene1914	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09575
RY45_09580	RY45_09580		RY45_09580	2061449	2062225	+	pilus assembly protein PilW		gene	gene1915	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09580
RY45_09585	RY45_09585		RY45_09585	2062215	2063153	+	XRE family transcriptional regulator		gene	gene1916	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09585
RY45_09590	RY45_09590		RY45_09590	2063164	2064279	+	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase		gene	gene1917	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09590
RY45_09595	RY45_09595		RY45_09595	2064418	2065695	+	histidinol dehydrogenase		gene	gene1918	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09595
RY45_09600	RY45_09600		RY45_09600	2065699	2066349	+	hypothetical protein		gene	gene1919	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09600
RY45_09605	RY45_09605		RY45_09605	2066342	2067526	+	membrane biogenesis protein		gene	gene1920	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09605
RY45_09610	RY45_09610		RY45_09610	2067601	2069100	+	GTP-binding protein Der		gene	gene1921	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09610
RY45_09615	RY45_09615		RY45_09615	2069204	2069437	+	ubiquitin--protein ligase		gene	gene1922	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09615
RY45_09620	RY45_09620		RY45_09620	2069796	2071286	-	murein transglycosylase		gene	gene1923	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09620
RY45_09625	RY45_09625		RY45_09625	2071436	2075341	+	phosphoribosylformylglycinamidine synthase	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis	gene	gene1924	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09625
RY45_09630	RY45_09630		RY45_09630	2075403	2076929	-	phosphodiesterase		gene	gene1925	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09630
RY45_09635	RY45_09635		RY45_09635	2076945	2078378	-	phosphodiesterase		gene	gene1926	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09635
RY45_09640	RY45_09640		RY45_09640	2078375	2079505	-	hypothetical protein		gene	gene1927	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09640
RY45_09645	RY45_09645		RY45_09645	2079696	2081159	-	NADH:ubiquinone oxidoreductase subunit N	Catalyzes the transfer of electrons from NADH to quinone	gene	gene1928	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09645
RY45_09650	RY45_09650		RY45_09650	2081221	2082741	-	NADH:ubiquinone oxidoreductase subunit M		gene	gene1929	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09650
RY45_09655	RY45_09655		RY45_09655	2082820	2084667	-	NADH:ubiquinone oxidoreductase subunit L	Catalyzes the transfer of electrons from NADH to ubiquinone	gene	gene1930	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09655
RY45_09660	RY45_09660		RY45_09660	2084664	2084972	-	NADH-quinone oxidoreductase subunit K		gene	gene1931	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09660
RY45_09665	RY45_09665		RY45_09665	2084972	2085520	-	NADH:ubiquinone oxidoreductase subunit J	Catalyzes the transfer of electrons from NADH to quinone	gene	gene1932	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09665
RY45_09670	RY45_09670		RY45_09670	2085531	2086073	-	NADH dehydrogenase		gene	gene1933	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09670
RY45_09675	RY45_09675		RY45_09675	2086202	2087170	-	NADH:ubiquinone oxidoreductase		gene	gene1934	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09675
RY45_09680	RY45_09680		RY45_09680	2087167	2089896	-	NADH dehydrogenase	Catalyzes the transfer of electrons from NADH to quinone	gene	gene1935	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09680
RY45_09685	RY45_09685		RY45_09685	2089976	2091343	-	NADH dehydrogenase		gene	gene1936	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09685
RY45_09690	RY45_09690		RY45_09690	2091340	2091882	-	NADH dehydrogenase	Catalyzes the transfer of electrons from NADH to quinone	gene	gene1937	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09690
RY45_09695	RY45_09695		RY45_09695	2091944	2093749	-	NADH:ubiquinone oxidoreductase	NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms	gene	gene1938	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09695
RY45_09700	RY45_09700		RY45_09700	2093752	2094426	-	NADH dehydrogenase		gene	gene1939	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09700
RY45_09705	RY45_09705		RY45_09705	2094456	2094860	-	NADH-quinone oxidoreductase subunit A		gene	gene1940	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09705
RY45_09710	RY45_09710		RY45_09710	2095119	2095994	-	flagellar motor protein MotB		gene	gene1941	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09710
RY45_09715	RY45_09715		RY45_09715	2095972	2096730	-	chemotaxis protein MotA		gene	gene1942	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09715
RY45_09720	RY45_09720		RY45_09720	2097365	2097452	-	tRNA-Ser		tRNA	gene1944	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09720
RY45_09725	RY45_09725		RY45_09725	2097598	2098215	-	membrane protein		gene	gene1945	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09725
RY45_09730	RY45_09730		RY45_09730	2098236	2098964	-	methanol dehydrogenase		gene	gene1946	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09730
RY45_09735	RY45_09735		RY45_09735	2098961	2099566	-	LemA family protein		gene	gene1947	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09735
RY45_09740	RY45_09740		RY45_09740	2099609	2100373	-	peptidase		gene	gene1948	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09740
RY45_09745	RY45_09745		RY45_09745	2100549	2101091	+	hypothetical protein		gene	gene1949	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09745
RY45_09750	RY45_09750		RY45_09750	2101344	2101589	+	RNA-binding protein		gene	gene1950	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09750
RY45_09755	RY45_09755		RY45_09755	2101661	2102560	-	oxidoreductase		gene	gene1951	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09755
RY45_09760	RY45_09760		RY45_09760	2102676	2103083	+	DNA-binding protein		gene	gene1952	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09760
RY45_09765	RY45_09765		RY45_09765	2103165	2103866	+	short-chain dehydrogenase		gene	gene1953	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09765
RY45_09770	RY45_09770		RY45_09770	2103957	2104976	+	L-allo-threonine aldolase		gene	gene1954	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09770
RY45_09775	RY45_09775		RY45_09775	2105037	2105468	-	diguanylate cyclase		gene	gene1955	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09775
RY45_09780	RY45_09780		RY45_09780	2105477	2106511	-	chemotaxis protein CheC		gene	gene1956	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09780
RY45_09785	RY45_09785		RY45_09785	2106566	2107504	-	LysR family transcriptional regulator		gene	gene1957	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09785
RY45_09790	RY45_09790		RY45_09790	2107578	2108279	-	hypothetical protein		gene	gene1958	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09790
RY45_09795	RY45_09795		RY45_09795	2108446	2110383	+	diguanylate phosphodiesterase		gene	gene1959	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09795
RY45_09800	RY45_09800		RY45_09800	2110472	2111197	+	FMN reductase		gene	gene1960	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09800
RY45_09805	RY45_09805		RY45_09805	2111386	2112150	+	DNA repair protein		gene	gene1961	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09805
RY45_09810	RY45_09810		RY45_09810	2112144	2112698	+	hypothetical protein		gene	gene1962	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09810
RY45_09815	RY45_09815		RY45_09815	2112745	2113953	-	major facilitator transporter		gene	gene1963	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09815
RY45_09820	RY45_09820		RY45_09820	2114047	2114922	+	LysR family transcriptional regulator		gene	gene1964	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09820
RY45_09825	RY45_09825	cysB	cysB	2114996	2115970	+	CysB family transcriptional regulator	LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation	gene	gene1965	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09825
RY45_09830	RY45_09830		RY45_09830	2116049	2116642	-	GTP cyclohydrolase		gene	gene1966	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09830
RY45_09835	RY45_09835		RY45_09835	2116892	2117584	+	cytidylate kinase		gene	gene1967	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09835
RY45_09840	RY45_09840	rpsA	rpsA	2117678	2119348	+	30S ribosomal protein S1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins	gene	gene1968	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09840
RY45_09845	RY45_09845	ihfB	ihfB	2119444	2119728	+	integration host factor subunit beta	This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control	gene	gene1969	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09845
RY45_09850	RY45_09850		RY45_09850	2119885	2120169	+	membrane protein		gene	gene1970	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09850
RY45_09855	RY45_09855		RY45_09855	2120179	2121345	+	tetratricopeptide repeat protein		gene	gene1971	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09855
RY45_09860	RY45_09860		RY45_09860	2121447	2122148	+	orotidine 5'-phosphate decarboxylase		gene	gene1972	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09860
RY45_09865	RY45_09865		RY45_09865	2122196	2122702	-	membrane protein		gene	gene1973	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09865
RY45_09870	RY45_09870		RY45_09870	2122773	2123390	+	DTW domain-containing protein		gene	gene1974	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09870
RY45_09875	RY45_09875		RY45_09875	2123413	2124120	+	7-cyano-7-deazaguanine synthase		gene	gene1975	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09875
RY45_09880	RY45_09880		RY45_09880	2124182	2124853	+	pyrroloquinoline quinone biosynthesis protein		gene	gene1976	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09880
RY45_09885	RY45_09885		RY45_09885	2124855	2125085	+	hypothetical protein		gene	gene1977	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09885
RY45_09890	RY45_09890		RY45_09890	2125082	2125645	+	ATP:cob(I)alamin adenosyltransferase		gene	gene1978	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09890
RY45_09895	RY45_09895		RY45_09895	2125712	2126116	-	transcriptional regulator		gene	gene1979	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09895
RY45_09900	RY45_09900		RY45_09900	2126696	2128276	+	hypothetical protein		gene	gene1980	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09900
RY45_09905	RY45_09905		RY45_09905	2128363	2128944	+	thymidine kinase	catalyzes the formation of thymidine 5'-phosphate from thymidine	gene	gene1981	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09905
RY45_09910	RY45_09910		RY45_09910	2129013	2130350	-	hypothetical protein		gene	gene1982	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09910
RY45_09915	RY45_09915		RY45_09915	2130539	2130964	+	histidine kinase		gene	gene1983	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09915
RY45_09920	RY45_09920		RY45_09920	2131111	2131198	+	tRNA-Ser		tRNA	gene1984	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09920
RY45_09925	RY45_09925		RY45_09925	2132380	2132898	+	major exported protein		gene	gene1986	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09925
RY45_09930	RY45_09930		RY45_09930	2133177	2135222	+	type IV secretion protein Rhs		gene	gene1987	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09930
RY45_09935	RY45_09935		RY45_09935	2137800	2138384	+	hypothetical protein		gene	gene1988	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09935
RY45_09940	RY45_09940		RY45_09940	2139500	2140462	+	transposase		gene	gene1989	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09940
RY45_09945	RY45_09945	transposase	transposase	2141101	2141735	-		disrupted	pseudogene	gene1990	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09945
RY45_09950	RY45_09950		RY45_09950	2144201	2144455	-	hypothetical protein		gene	gene1991	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09950
RY45_09955	RY45_09955		RY45_09955	2145166	2145241	-	tRNA-His		tRNA	gene1992	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09955
RY45_09960	RY45_09960		RY45_09960	2145291	2145367	-	tRNA-Arg		tRNA	gene1993	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09960
RY45_09965	RY45_09965		RY45_09965	2145404	2145480	-	tRNA-Pro		tRNA	gene1994	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09965
RY45_09970	RY45_09970		RY45_09970	2145684	2146547	+	methenyltetrahydrofolate cyclohydrolase		gene	gene1995	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09970
RY45_09975	RY45_09975		RY45_09975	2146655	2146873	-	stationary phase/starvation inducible regulatory protein CspD	inhibits DNA replication at both initiation and elongation steps%3B stationary phase and starvation inducible	gene	gene1996	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09975
RY45_09980	RY45_09980	clpS	clpS	2147102	2147419	+	Clp protease ClpS	involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA	gene	gene1997	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09980
RY45_09985	RY45_09985	clpA	clpA	2147479	2149731	+	Clp protease ClpX	ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates	gene	gene1998	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09985
RY45_09990	RY45_09990		RY45_09990	2149801	2150019	-	translation initiation factor IF-1		gene	gene1999	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09990
RY45_09995	RY45_09995		RY45_09995	2150089	2150805	-	arginyl-tRNA-protein transferase		gene	gene2000	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_09995
RY45_10000	RY45_10000		RY45_10000	2150802	2151509	-	leucyl/phenylalanyl-tRNA--protein transferase		gene	gene2001	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10000
RY45_10005	RY45_10005		RY45_10005	2151529	2151999	+	membrane protein		gene	gene2002	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10005
RY45_10010	RY45_10010		RY45_10010	2152108	2153355	-	diguanylate cyclase		gene	gene2003	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10010
RY45_10015	RY45_10015		RY45_10015	2153413	2154363	-	thioredoxin reductase	catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding	gene	gene2004	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10015
RY45_10020	RY45_10020		RY45_10020	2155249	2155740	+	leucine-responsive transcriptional regulator	mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system	gene	gene2005	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10020
RY45_10025	RY45_10025		RY45_10025	2155942	2158464	+	cell division protein FtsK		gene	gene2006	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10025
RY45_10030	RY45_10030		RY45_10030	2158542	2159150	+	membrane protein		gene	gene2007	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10030
RY45_10035	RY45_10035		RY45_10035	2159297	2160640	+	recombination factor protein RarA		gene	gene2008	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10035
RY45_10040	RY45_10040		RY45_10040	2160706	2160936	-	hypothetical protein		gene	gene2009	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10040
RY45_10045	RY45_10045		RY45_10045	2160980	2162275	+	seryl-tRNA synthetase		gene	gene2010	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10045
RY45_10050	RY45_10050		RY45_10050	2162462	2162950	+	bacteriocin production protein		gene	gene2011	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10050
RY45_10055	RY45_10055		RY45_10055	2162972	2164492	+	amidophosphoribosyltransferase	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway	gene	gene2012	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10055
RY45_10060	RY45_10060		RY45_10060	2164677	2165435	+	tRNA hydroxylase		gene	gene2013	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10060
RY45_10065	RY45_10065		RY45_10065	2165590	2166375	-	peptide ABC transporter ATP-binding protein		gene	gene2014	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10065
RY45_10070	RY45_10070		RY45_10070	2166431	2167429	-	peptide ABC transporter ATP-binding protein	involved in resistance to antimibial peptides	gene	gene2015	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10070
RY45_10075	RY45_10075		RY45_10075	2167557	2168450	-	peptide ABC transporter permease		gene	gene2016	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10075
RY45_10080	RY45_10080		RY45_10080	2168486	2169445	-	peptide ABC transporter permease		gene	gene2017	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10080
RY45_10085	RY45_10085		RY45_10085	2169448	2171043	-	peptide ABC transporter substrate-binding protein		gene	gene2018	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10085
RY45_10090	RY45_10090		RY45_10090	2171134	2172168	-	ATPase AAA		gene	gene2019	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10090
RY45_10095	RY45_10095		RY45_10095	2172365	2173045	+	phage shock protein	involved in maintaining membrane potential under membrane stress conditions%3B also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF	gene	gene2020	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10095
RY45_10100	RY45_10100		RY45_10100	2173049	2173285	+	phage-shock protein		gene	gene2021	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10100
RY45_10105	RY45_10105		RY45_10105	2173392	2173796	+	phage-shock protein		gene	gene2022	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10105
RY45_10110	RY45_10110		RY45_10110	2173925	2175331	+	hypothetical protein		gene	gene2023	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10110
RY45_10115	RY45_10115		RY45_10115	2175398	2176429	+	membrane protein		gene	gene2024	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10115
RY45_10120	RY45_10120	phhA	phhA	2176601	2177395	+	phenylalanine 4-monooxygenase	phenylalanine 4-hydroxylase%3B phenylalanine 4-hydroxylase%3B catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin	gene	gene2025	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10120
RY45_10125	RY45_10125		RY45_10125	2177450	2177788	+	pterin-4-alpha-carbinolamine dehydratase		gene	gene2026	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10125
RY45_10130	RY45_10130		RY45_10130	2178044	2179591	+	transcriptional regulator	regulates genes involved in the biosynthesis and transport of aromatic amino acids	gene	gene2027	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10130
RY45_10135	RY45_10135		RY45_10135	2179790	2180338	+	hypothetical protein		gene	gene2028	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10135
RY45_10140	RY45_10140		RY45_10140	2180335	2181603	+	DeoR faimly transcriptional regulator		gene	gene2029	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10140
RY45_10145	RY45_10145		RY45_10145	2181606	2182094	+	membrane protein		gene	gene2030	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10145
RY45_10150	RY45_10150		RY45_10150	2182152	2182886	-	membrane protein		gene	gene2031	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10150
RY45_10155	RY45_10155		RY45_10155	2183005	2184120	+	ATP-NAD kinase		gene	gene2032	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10155
RY45_10160	RY45_10160		RY45_10160	2184231	2184509	+	hypothetical protein		gene	gene2033	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10160
RY45_10165	RY45_10165		RY45_10165	2184607	2186271	+	AMP-dependent synthetase		gene	gene2034	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10165
RY45_10170	RY45_10170		RY45_10170	2186356	2187237	-	cytidine deaminase		gene	gene2035	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10170
RY45_10175	RY45_10175		RY45_10175	2187425	2188111	-	hypothetical protein		gene	gene2036	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10175
RY45_10180	RY45_10180		RY45_10180	2188108	2188464	-	LrgA		gene	gene2037	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10180
RY45_10185	RY45_10185		RY45_10185	2188624	2190333	+	alpha-galactosidase		gene	gene2038	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10185
RY45_10190	RY45_10190		RY45_10190	2190406	2190912	-	hypothetical protein		gene	gene2039	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10190
RY45_10195	RY45_10195		RY45_10195	2191067	2192494	-	exonuclease I		gene	gene2040	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10195
RY45_10200	RY45_10200		RY45_10200	2192726	2194225	-	arabinose isomerase		gene	gene2041	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10200
RY45_10205	RY45_10205	araD	araD	2194241	2194939	-	ribulose 5-phosphate epimerase	catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source	gene	gene2042	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10205
RY45_10210	RY45_10210		RY45_10210	2194936	2196627	-	ribulokinase	catalyzes the phosphorylation of ribulose to ribulose 5-phosphate	gene	gene2043	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10210
RY45_10215	RY45_10215		RY45_10215	2196989	2197972	+	sugar ABC transporter substrate-binding protein	with AraGH is involved in the transport of arabinose into the cell	gene	gene2044	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10215
RY45_10220	RY45_10220	araG	araG	2198045	2199544	+	L-arabinose transporter ATP-binding protein	Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose	gene	gene2045	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10220
RY45_10225	RY45_10225	araH	araH	2199593	2200594	+	L-arabinose transporter permease	Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose	gene	gene2046	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10225
RY45_10230	RY45_10230		RY45_10230	2200781	2201650	+	transcriptional regulator	positive and negative regulator%3B regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose	gene	gene2047	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10230
RY45_10235	RY45_10235		RY45_10235	2201745	2202650	-	LysR family transcriptional regulator		gene	gene2048	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10235
RY45_10240	RY45_10240		RY45_10240	2202774	2203640	+	quercetin 2%2C3-dioxygenase		gene	gene2049	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10240
RY45_10245	RY45_10245	rpmJ	rpmJ	2203689	2203814	-	50S ribosomal protein L36	smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif	gene	gene2050	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10245
RY45_10250	RY45_10250		RY45_10250	2203811	2204080	-	50S ribosomal protein L31		gene	gene2051	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10250
RY45_10255	RY45_10255		RY45_10255	2204337	2204585	+	damage-inducible protein I		gene	gene2052	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10255
RY45_10260	RY45_10260		RY45_10260	2204722	2205516	-	hypothetical protein		gene	gene2053	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10260
RY45_10265	RY45_10265		RY45_10265	2205568	2206071	-	metal-dependent hydrolase		gene	gene2054	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10265
RY45_10270	RY45_10270		RY45_10270	2206213	2207856	-	hypothetical protein		gene	gene2055	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10270
RY45_10275	RY45_10275		RY45_10275	2208052	2209710	-	5'-nucleotidase		gene	gene2056	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10275
RY45_10280	RY45_10280	dcuC	dcuC	2209841	2211193	-	C4-dicarboxylate transporter	responsible for the transport of C4-dicarboxylates during anaerobic growth	gene	gene2057	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10280
RY45_10285	RY45_10285		RY45_10285	2211523	2212128	+	hypothetical protein		gene	gene2058	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10285
RY45_10290	RY45_10290	mnmC	mnmC	2212211	2214208	-	FAD-dependent oxidoreductase	5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme	gene	gene2059	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10290
RY45_10295	RY45_10295		RY45_10295	2214320	2215531	+	3-oxoacyl-ACP synthase	FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP	gene	gene2060	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10295
RY45_10300	RY45_10300		RY45_10300	2215591	2216085	-	acetyltransferase		gene	gene2061	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10300
RY45_10305	RY45_10305		RY45_10305	2216198	2216524	-	hypothetical protein		gene	gene2062	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10305
RY45_10310	RY45_10310	gltA	gltA	2216619	2217905	-	type II citrate synthase	type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH	gene	gene2063	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10310
RY45_10315	RY45_10315		RY45_10315	2218330	2218719	+	succinate dehydrogenase		gene	gene2064	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10315
RY45_10320	RY45_10320	sdhD	sdhD	2218713	2219057	+	succinate dehydrogenase		gene	gene2065	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10320
RY45_10325	RY45_10325	sdhA	sdhA	2219059	2220825	+	succinate dehydrogenase	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol	gene	gene2066	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10325
RY45_10330	RY45_10330	sdhB	sdhB	2220842	2221558	+	succinate dehydrogenase	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase	gene	gene2067	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10330
RY45_10335	RY45_10335		RY45_10335	2221681	2224491	+	2-oxoglutarate dehydrogenase		gene	gene2068	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10335
RY45_10340	RY45_10340		RY45_10340	2224584	2225771	+	dihydrolipoamide succinyltransferase	component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA	gene	gene2069	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10340
RY45_10345	RY45_10345	sucC	sucC	2225995	2227161	+	succinyl-CoA synthetase subunit beta	catalyzes the interconversion of succinyl-CoA and succinate	gene	gene2070	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10345
RY45_10350	RY45_10350		RY45_10350	2227161	2228033	+	succinyl-CoA synthetase subunit alpha	Catalyzes the only substrate-level phosphorylation in the TCA cycle	gene	gene2071	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10350
RY45_10355	RY45_10355		RY45_10355	2228614	2228850	-	hypothetical protein		gene	gene2072	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10355
RY45_10360	RY45_10360		RY45_10360	2229177	2229632	+	hypothetical protein		gene	gene2073	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10360
RY45_10365	RY45_10365		RY45_10365	2229740	2231146	-	FAD-dependent oxidoreductase		gene	gene2074	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10365
RY45_10370	RY45_10370		RY45_10370	2231165	2232913	-	phosphonate ABC transporter permease		gene	gene2075	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10370
RY45_10375	RY45_10375		RY45_10375	2232910	2234004	-	phosphonate ABC transporter ATP-binding protein		gene	gene2076	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10375
RY45_10380	RY45_10380		RY45_10380	2234273	2235292	-	phosphonate ABC transporter substrate-binding protein		gene	gene2077	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10380
RY45_10385	RY45_10385		RY45_10385	2235413	2236120	-	transcriptional regulator		gene	gene2078	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10385
RY45_10390	RY45_10390		RY45_10390	2236374	2237516	+	2-aminoethylphosphonate--pyruvate aminotransferase	catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate	gene	gene2079	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10390
RY45_10395	RY45_10395		RY45_10395	2237513	2238952	+	4-aminobutyrate aminotransferase	catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate	gene	gene2080	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10395
RY45_10400	RY45_10400		RY45_10400	2238966	2239784	+	phosphonoacetaldehyde hydrolase	catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate	gene	gene2081	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10400
RY45_10405	RY45_10405		RY45_10405	2239908	2242190	-	pyruvate formate-lyase	formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate	gene	gene2082	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10405
RY45_10410	RY45_10410		RY45_10410	2242236	2243084	-	formate transporter		gene	gene2083	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10410
RY45_10415	RY45_10415		RY45_10415	2243465	2245225	-	ribosomal protein S12 methylthiotransferase accessory factor YcaO		gene	gene2084	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10415
RY45_10420	RY45_10420		RY45_10420	2245353	2245667	-	molecular chaperone		gene	gene2085	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10420
RY45_10425	RY45_10425		RY45_10425	2246007	2247122	+	aspartate-semialdehyde dehydrogenase	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde	gene	gene2086	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10425
RY45_10430	RY45_10430		RY45_10430	2247739	2250516	+	peptidase M16		gene	gene2087	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10430
RY45_10435	RY45_10435		RY45_10435	2250610	2251773	-	methionine gamma-lyase	catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine	gene	gene2088	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10435
RY45_10440	RY45_10440		RY45_10440	2251867	2252937	-	2-oxobutyrate oxidase		gene	gene2089	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10440
RY45_10445	RY45_10445		RY45_10445	2253398	2254036	-	3-beta hydroxysteroid dehydrogenase		gene	gene2090	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10445
RY45_10450	RY45_10450		RY45_10450	2254138	2255043	+	LysR family transcriptional regulator		gene	gene2091	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10450
RY45_10455	RY45_10455		RY45_10455	2255146	2255886	-	3-ketoacyl-ACP reductase	catalyzes the conversion of 3-hydroxyacyl-CoA to 3-oxyacyl-CoA	gene	gene2092	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10455
RY45_10460	RY45_10460		RY45_10460	2256160	2257059	+	AraC family transcriptional regulator		gene	gene2093	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10460
RY45_10465	RY45_10465		RY45_10465	2257313	2259457	+	ligand-gated channel protein		gene	gene2094	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10465
RY45_10470	RY45_10470		RY45_10470	2259496	2260302	+	siderophore ferric iron reductase		gene	gene2095	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10470
RY45_10475	RY45_10475		RY45_10475	2260347	2261267	-	XRE family transcriptional regulator		gene	gene2096	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10475
RY45_10480	RY45_10480		RY45_10480	2261450	2263714	+	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase		gene	gene2097	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10480
RY45_10485	RY45_10485		RY45_10485	2263802	2264923	-	heptosyltransferase		gene	gene2098	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10485
RY45_10490	RY45_10490		RY45_10490	2265209	2266336	+	membrane protein		gene	gene2099	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10490
RY45_10495	RY45_10495		RY45_10495	2266379	2268313	-	amidohydrolase		gene	gene2100	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10495
RY45_10500	RY45_10500		RY45_10500	2268480	2269172	+	TetR family transcriptional regulator		gene	gene2101	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10500
RY45_10505	RY45_10505		RY45_10505	2269284	2270537	-	amino acid dehydrogenase	catalyzes the oxidative deamination of D-amino acids	gene	gene2102	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10505
RY45_10510	RY45_10510		RY45_10510	2270689	2272209	-	photolyase		gene	gene2103	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10510
RY45_10515	RY45_10515	tnaA	tnaA	2272844	2274229	+	cysteine desulfhydrase	tryptophan indole-lyase%3B catalyzes the formation of indole and pyruvate from tryptophan%3B also has xysteine desulfhydrase activity	gene	gene2104	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10515
RY45_10520	RY45_10520		RY45_10520	2274338	2275258	-	peptidase S11		gene	gene2105	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10520
RY45_10525	RY45_10525		RY45_10525	2275661	2276116	-	DNA mismatch repair protein MutT		gene	gene2106	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10525
RY45_10530	RY45_10530		RY45_10530	2276254	2277444	-	nitrite reductase		gene	gene2107	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10530
RY45_10535	RY45_10535		RY45_10535	2277441	2278040	-	thiol:disulfide interchange protein DsbE		gene	gene2108	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10535
RY45_10540	RY45_10540		RY45_10540	2278037	2279998	-	cytochrome C biogenesis protein CcmF		gene	gene2109	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10540
RY45_10545	RY45_10545		RY45_10545	2280161	2281117	-	nitrite reductase	membrane protein%2C may be involved in the transfer of electrons from quinones to c-type cytochromes	gene	gene2110	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10545
RY45_10550	RY45_10550		RY45_10550	2281114	2281806	-	nitrite reductase	4Fe4S subunit%3B may be involved in the transfer of electrons from quinones to the c-type cytochromes	gene	gene2111	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10550
RY45_10555	RY45_10555		RY45_10555	2281803	2282417	-	cytochrome C		gene	gene2112	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10555
RY45_10560	RY45_10560	nrfA	nrfA	2282469	2283914	-	cytochrome C nitrite reductase	catalyzes the formate-dependent reduction of nitrite to ammonia%3B cytochrome C552	gene	gene2113	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10560
RY45_10565	RY45_10565		RY45_10565	2284631	2295325	+	type I secretion protein		gene	gene2114	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10565
RY45_10570	RY45_10570	glpC	glpC	2295415	2296617	-	glycerol-3-phosphate dehydrogenase	anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate	gene	gene2115	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10570
RY45_10575	RY45_10575		RY45_10575	2296669	2297949	-	glycerol-3-phosphate dehydrogenase		gene	gene2116	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10575
RY45_10580	RY45_10580		RY45_10580	2297939	2299618	-	glycerol-3-phosphate dehydrogenase		gene	gene2117	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10580
RY45_10585	RY45_10585		RY45_10585	2299812	2300174	-	hypothetical protein		gene	gene2118	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10585
RY45_10590	RY45_10590		RY45_10590	2300399	2302066	+	chemotaxis protein		gene	gene2119	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10590
RY45_10595	RY45_10595		RY45_10595	2302199	2303410	+	transcriptional regulator		gene	gene2120	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10595
RY45_10600	RY45_10600		RY45_10600	2303407	2304990	+	histidine kinase		gene	gene2121	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10600
RY45_10605	RY45_10605		RY45_10605	2304991	2305656	+	chemotaxis protein CheY		gene	gene2122	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10605
RY45_10610	RY45_10610		RY45_10610	2305735	2307267	-	tripartite tricarboxylate transporter TctA		gene	gene2123	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10610
RY45_10615	RY45_10615		RY45_10615	2307277	2307738	-	TctB		gene	gene2124	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10615
RY45_10620	RY45_10620		RY45_10620	2307781	2308746	-	transporter		gene	gene2125	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10620
RY45_10625	RY45_10625		RY45_10625	2308973	2310505	-	lytic transglycosylase		gene	gene2126	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10625
RY45_10630	RY45_10630		RY45_10630	2310720	2312405	-	transporter		gene	gene2127	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10630
RY45_10635	RY45_10635		RY45_10635	2313181	2313256	-	tRNA-Asn		tRNA	gene2128	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10635
RY45_10640	RY45_10640		RY45_10640	2313392	2315404	+	excinuclease ABC subunit B	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion	gene	gene2129	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10640
RY45_10645	RY45_10645		RY45_10645	2315401	2315670	+	hypothetical protein		gene	gene2130	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10645
RY45_10650	RY45_10650		RY45_10650	2315827	2316480	+	hypothetical protein		gene	gene2131	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10650
RY45_10655	RY45_10655		RY45_10655	2316568	2317089	-	disulfide bond formation protein DsbB		gene	gene2132	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10655
RY45_10660	RY45_10660		RY45_10660	2317175	2318755	-	sodium:proton antiporter		gene	gene2133	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10660
RY45_10665	RY45_10665		RY45_10665	2319089	2319802	+	fatty acid metabolism regulator	Multifunctional regulator of fatty acid metabolism	gene	gene2134	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10665
RY45_10670	RY45_10670		RY45_10670	2319868	2321385	-	SpoVR family protein		gene	gene2135	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10670
RY45_10675	RY45_10675		RY45_10675	2321396	2322667	-	hypothetical protein		gene	gene2136	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10675
RY45_10680	RY45_10680		RY45_10680	2322691	2324613	-	serine/threonine protein kinase		gene	gene2137	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10680
RY45_10685	RY45_10685		RY45_10685	2325179	2327107	-	ATP-dependent DNA helicase RecQ		gene	gene2138	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10685
RY45_10690	RY45_10690		RY45_10690	2327445	2328695	+	serine/threonine protein kinase		gene	gene2139	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10690
RY45_10695	RY45_10695		RY45_10695	2329114	2330412	-	serine/threonine protein kinase		gene	gene2140	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10695
RY45_10700	RY45_10700		RY45_10700	2330628	2331194	-	NUDIX hydrolase		gene	gene2141	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10700
RY45_10705	RY45_10705	pabB	pabB	2331242	2332528	-	aminodeoxychorismate synthase	para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine	gene	gene2142	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10705
RY45_10710	RY45_10710		RY45_10710	2332825	2334348	+	fumarate hydratase	catalyzes the formation of fumarate from malate	gene	gene2143	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10710
RY45_10715	RY45_10715		RY45_10715	2334776	2335264	-	cell division inhibitor		gene	gene2144	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10715
RY45_10720	RY45_10720		RY45_10720	2335498	2335695	+	hypothetical protein		gene	gene2145	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10720
RY45_10725	RY45_10725		RY45_10725	2335705	2335893	+	hypothetical protein		gene	gene2146	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10725
RY45_10730	RY45_10730		RY45_10730	2336081	2338555	+	maltodextrin phosphorylase		gene	gene2147	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10730
RY45_10735	RY45_10735		RY45_10735	2338810	2340198	-	Anion transporter		gene	gene2148	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10735
RY45_10740	RY45_10740		RY45_10740	2340364	2340792	-	thioredoxin		gene	gene2149	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10740
RY45_10745	RY45_10745		RY45_10745	2340947	2343748	+	histidine kinase		gene	gene2150	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10745
RY45_10750	RY45_10750		RY45_10750	2343890	2345626	+	multidrug ABC transporter ATP-binding protein		gene	gene2151	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10750
RY45_10755	RY45_10755		RY45_10755	2345739	2347490	+	multidrug ABC transporter ATP-binding protein		gene	gene2152	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10755
RY45_10760	RY45_10760		RY45_10760	2347641	2348114	+	hypothetical protein		gene	gene2153	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10760
RY45_10765	RY45_10765		RY45_10765	2348271	2348504	-	ribosome-associated protein		gene	gene2154	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10765
RY45_10770	RY45_10770		RY45_10770	2348694	2349098	-	enoyl-CoA hydratase		gene	gene2155	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10770
RY45_10775	RY45_10775		RY45_10775	2349095	2350879	-	poly(3-hydroxyalkanoate) synthetase		gene	gene2156	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10775
RY45_10780	RY45_10780		RY45_10780	2350973	2351323	-	PHA granule-associated protein		gene	gene2157	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10780
RY45_10785	RY45_10785		RY45_10785	2351641	2352204	+	phaC PHA synthase		gene	gene2158	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10785
RY45_10790	RY45_10790		RY45_10790	2352283	2353038	+	phaC PHA synthase		gene	gene2159	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10790
RY45_10795	RY45_10795		RY45_10795	2353546	2354409	+	pyridoxamine kinase	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal	gene	gene2160	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10795
RY45_10800	RY45_10800		RY45_10800	2354576	2354908	-	antibiotic biosynthesis monooxygenase		gene	gene2161	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10800
RY45_10805	RY45_10805		RY45_10805	2355025	2356143	-	glycerol dehydrogenase		gene	gene2162	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10805
RY45_10810	RY45_10810		RY45_10810	2356395	2356901	-	GNAT family acetyltransferase		gene	gene2163	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10810
RY45_10815	RY45_10815		RY45_10815	2357071	2357502	-	NUDIX hydrolase		gene	gene2164	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10815
RY45_10820	RY45_10820		RY45_10820	2357460	2358032	-	adenylate cyclase		gene	gene2165	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10820
RY45_10825	RY45_10825		RY45_10825	2358389	2359234	+	hypothetical protein		gene	gene2166	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10825
RY45_10830	RY45_10830		RY45_10830	2359395	2359727	+	membrane protein		gene	gene2167	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10830
RY45_10835	RY45_10835		RY45_10835	2359761	2360252	+	acetyltransferase		gene	gene2168	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10835
RY45_10840	RY45_10840		RY45_10840	2360260	2360724	+	GCN5 family acetyltransferase		gene	gene2169	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10840
RY45_10845	RY45_10845		RY45_10845	2360776	2362161	-	ATP-dependent RNA helicase RhlE	this helicase is not essential cell growth	gene	gene2170	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10845
RY45_10850	RY45_10850		RY45_10850	2362321	2362797	-	glutathione peroxidase		gene	gene2171	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10850
RY45_10855	RY45_10855		RY45_10855	2363085	2363693	+	SM-20		gene	gene2172	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10855
RY45_10860	RY45_10860		RY45_10860	2363894	2364883	+	D-alanine--D-alanine ligase		gene	gene2173	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10860
RY45_10865	RY45_10865		RY45_10865	2364962	2365375	-	hypothetical protein		gene	gene2174	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10865
RY45_10870	RY45_10870		RY45_10870	2365542	2366303	+	DTW protein		gene	gene2175	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10870
RY45_10875	RY45_10875		RY45_10875	2366512	2367291	+	membrane protein		gene	gene2176	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10875
RY45_10880	RY45_10880		RY45_10880	2367375	2368229	-	LysR family transcriptional regulator		gene	gene2177	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10880
RY45_10885	RY45_10885		RY45_10885	2368287	2369198	-	membrane protein		gene	gene2178	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10885
RY45_10890	RY45_10890		RY45_10890	2369366	2370253	+	AraC family transcriptional regulator		gene	gene2179	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10890
RY45_10895	RY45_10895		RY45_10895	2370515	2372152	+	RedF		gene	gene2180	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10895
RY45_10900	RY45_10900		RY45_10900	2372360	2373079	+	hypothetical protein		gene	gene2181	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10900
RY45_10905	RY45_10905		RY45_10905	2373150	2375213	-	glycogen debranching protein		gene	gene2182	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10905
RY45_10910	RY45_10910		RY45_10910	2375410	2375486	+	tRNA-Met		tRNA	gene2183	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10910
RY45_10915	RY45_10915		RY45_10915	2375579	2375655	+	tRNA-Met		tRNA	gene2184	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10915
RY45_10920	RY45_10920		RY45_10920	2375752	2375828	+	tRNA-Met		tRNA	gene2185	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10920
RY45_10925	RY45_10925		RY45_10925	2375925	2376001	+	tRNA-Met		tRNA	gene2186	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10925
RY45_10930	RY45_10930		RY45_10930	2376277	2376353	+	tRNA-Met		tRNA	gene2187	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10930
RY45_10935	RY45_10935		RY45_10935	2376527	2378023	+	peptidase M17		gene	gene2188	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10935
RY45_10940	RY45_10940		RY45_10940	2378032	2378712	+	haloacid dehalogenase		gene	gene2189	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10940
RY45_10945	RY45_10945		RY45_10945	2378794	2380050	-	peptidase M20		gene	gene2190	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10945
RY45_10950	RY45_10950		RY45_10950	2381269	2382240	-	6-phosphofructokinase	catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis	gene	gene2191	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10950
RY45_10955	RY45_10955		RY45_10955	2382388	2383143	-	triosephosphate isomerase	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate	gene	gene2192	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10955
RY45_10960	RY45_10960		RY45_10960	2383279	2384049	-	membrane protein		gene	gene2193	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10960
RY45_10965	RY45_10965		RY45_10965	2384349	2385125	+	SAM-dependent methyltransferase		gene	gene2194	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10965
RY45_10970	RY45_10970		RY45_10970	2385203	2386522	+	condesin subunit F	acts with MukB and MukE to condense the chromosome and allow for segregation during cell division	gene	gene2195	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10970
RY45_10975	RY45_10975		RY45_10975	2386503	2387240	+	condesin subunit E	acts with MukB and MukF to condense the chromosome and allow for segregation during cell division	gene	gene2196	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10975
RY45_10980	RY45_10980	mukB	mukB	2387268	2391695	+	cell division protein MukB	SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects	gene	gene2197	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10980
RY45_10985	RY45_10985		RY45_10985	2391867	2392265	+	lipoprotein		gene	gene2198	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10985
RY45_10990	RY45_10990		RY45_10990	2392400	2392720	+	antibiotic biosynthesis monooxygenase		gene	gene2199	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10990
RY45_10995	RY45_10995		RY45_10995	2393044	2393499	+	histone acetyltransferase		gene	gene2200	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_10995
RY45_11000	RY45_11000		RY45_11000	2393526	2394032	+	peptide deformylase		gene	gene2201	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11000
RY45_11005	RY45_11005		RY45_11005	2394092	2394703	+	thiamine biosynthesis protein ThiJ		gene	gene2202	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11005
RY45_11010	RY45_11010		RY45_11010	2394771	2395256	+	histone acetyltransferase		gene	gene2203	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11010
RY45_11015	RY45_11015		RY45_11015	2395309	2395818	+	GCN5 family acetyltransferase		gene	gene2204	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11015
RY45_11020	RY45_11020		RY45_11020	2395815	2396645	+	hypothetical protein		gene	gene2205	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11020
RY45_11025	RY45_11025		RY45_11025	2396737	2396940	-	hypothetical protein		gene	gene2206	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11025
RY45_11030	RY45_11030		RY45_11030	2397127	2398014	+	PhzF family phenazine biosynthesis protein		gene	gene2207	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11030
RY45_11035	RY45_11035		RY45_11035	2398087	2399364	-	permease		gene	gene2208	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11035
RY45_11040	RY45_11040		RY45_11040	2400037	2400615	-	PhnA domain protein		gene	gene2209	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11040
RY45_11045	RY45_11045		RY45_11045	2400841	2402070	+	hypothetical protein		gene	gene2210	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11045
RY45_11050	RY45_11050	carbohydrate-binding protein	carbohydrate-binding protein	2402387	2403823	+		disrupted	pseudogene	gene2211	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11050
RY45_11055	RY45_11055		RY45_11055	2404290	2404670	+	glyoxalase		gene	gene2212	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11055
RY45_11060	RY45_11060		RY45_11060	2404807	2405205	+	aldehyde-activating protein		gene	gene2213	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11060
RY45_11065	RY45_11065		RY45_11065	2405248	2405877	+	histidine phosphatase		gene	gene2214	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11065
RY45_11070	RY45_11070		RY45_11070	2405931	2407226	-	diguanylate cyclase		gene	gene2215	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11070
RY45_11075	RY45_11075		RY45_11075	2407448	2407858	+	ATPase		gene	gene2216	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11075
RY45_11080	RY45_11080		RY45_11080	2407955	2408479	-	hypothetical protein		gene	gene2217	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11080
RY45_11085	RY45_11085		RY45_11085	2408545	2409480	+	50S ribosomal protein L30		gene	gene2218	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11085
RY45_11090	RY45_11090		RY45_11090	2409493	2410581	+	chorismate synthase	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis	gene	gene2219	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11090
RY45_11095	RY45_11095		RY45_11095	2410682	2411497	-	ABC transporter substrate-binding protein		gene	gene2220	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11095
RY45_11100	RY45_11100		RY45_11100	2411821	2413206	+	RNA helicase		gene	gene2221	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11100
RY45_11105	RY45_11105		RY45_11105	2413312	2414001	-	RES domain-containing protein		gene	gene2222	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11105
RY45_11110	RY45_11110		RY45_11110	2414001	2414405	-	hypothetical protein		gene	gene2223	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11110
RY45_11115	RY45_11115		RY45_11115	2414655	2415848	-	tyrosine transporter TyrP	tyrosine specific permease	gene	gene2224	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11115
RY45_11120	RY45_11120		RY45_11120	2416155	2417141	-	transcriptional regulator		gene	gene2225	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11120
RY45_11125	RY45_11125		RY45_11125	2417447	2418547	+	PTS galactitol transporter subunit IIA		gene	gene2226	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11125
RY45_11130	RY45_11130	fruK	fruK	2418547	2419536	+	1-phosphofructokinase	converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers	gene	gene2227	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11130
RY45_11135	RY45_11135		RY45_11135	2419533	2421269	+	PTS fructose transporter subunit IIBC		gene	gene2228	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11135
RY45_11140	RY45_11140		RY45_11140	2421458	2422027	+	glucose-6-phosphate isomerase		gene	gene2229	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11140
RY45_11145	RY45_11145		RY45_11145	2422049	2423056	-	LacI family transcriptional regulator		gene	gene2230	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11145
RY45_11150	RY45_11150		RY45_11150	2423269	2425035	+	mannose-6-phosphate isomerase		gene	gene2231	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11150
RY45_11155	RY45_11155		RY45_11155	2425041	2425472	+	PTS fructose transporter subunit IIA		gene	gene2232	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11155
RY45_11160	RY45_11160		RY45_11160	2425482	2425976	+	PTS N-acetylgalactosamine transporter subunit IID		gene	gene2233	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11160
RY45_11165	RY45_11165		RY45_11165	2425989	2426792	+	PTS sorbose transporter subunit IIC		gene	gene2234	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11165
RY45_11170	RY45_11170		RY45_11170	2426822	2427640	+	PTS fructose transporter subunit IID		gene	gene2235	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11170
RY45_11175	RY45_11175		RY45_11175	2427727	2428884	+	mannose-6-phosphate isomerase		gene	gene2236	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11175
RY45_11180	RY45_11180		RY45_11180	2428909	2429160	-	Fe-S protein		gene	gene2237	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11180
RY45_11185	RY45_11185		RY45_11185	2429311	2430462	+	murein transglycosylase		gene	gene2238	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11185
RY45_11190	RY45_11190		RY45_11190	2430571	2430891	-	ferredoxin		gene	gene2239	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11190
RY45_11195	RY45_11195		RY45_11195	2430888	2432021	-	ribonucleotide-diphosphate reductase subunit beta	B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA	gene	gene2240	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11195
RY45_11200	RY45_11200		RY45_11200	2432087	2434354	-	ribonucleotide-diphosphate reductase subunit alpha	Catalyzes the rate-limiting step in dNTP synthesis	gene	gene2241	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11200
RY45_11205	RY45_11205		RY45_11205	2434933	2435619	-	haloacid dehalogenase		gene	gene2242	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11205
RY45_11210	RY45_11210		RY45_11210	2435619	2436335	-	3-demethylubiquinone-9 3-methyltransferase		gene	gene2243	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11210
RY45_11215	RY45_11215		RY45_11215	2436537	2439284	+	DNA gyrase subunit A		gene	gene2244	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11215
RY45_11220	RY45_11220		RY45_11220	2439781	2440836	-	DNA repair photolyase		gene	gene2245	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11220
RY45_11225	RY45_11225		RY45_11225	2441011	2441598	+	hypothetical protein		gene	gene2246	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11225
RY45_11230	RY45_11230	thrS	thrS	2441835	2443763	+	threonine--tRNA ligase	catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)	gene	gene2247	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11230
RY45_11235	RY45_11235		RY45_11235	2443875	2444315	+	translation initiation factor IF-3		gene	gene2248	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11235
RY45_11240	RY45_11240		RY45_11240	2444402	2444599	+	50S ribosomal protein L35		gene	gene2249	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11240
RY45_11245	RY45_11245	rplT	rplT	2444615	2444971	+	50S ribosomal protein L20	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit	gene	gene2250	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11245
RY45_11250	RY45_11250		RY45_11250	2445288	2446271	+	phenylalanine--tRNA ligase alpha subunit		gene	gene2251	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11250
RY45_11255	RY45_11255	pheT	pheT	2446284	2448671	+	phenylalanine--tRNA ligase	catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily	gene	gene2252	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11255
RY45_11260	RY45_11260	ihfA	ihfA	2448675	2448971	+	integration host factor subunit alpha	This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control	gene	gene2253	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11260
RY45_11265	RY45_11265	histidine kinase	histidine kinase	2449026	2452984	+		disrupted	pseudogene	gene2254	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11265
RY45_11270	RY45_11270		RY45_11270	2452986	2454233	+	chemotaxis protein CheY		gene	gene2255	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11270
RY45_11275	RY45_11275		RY45_11275	2454237	2454836	+	acetyltransferase		gene	gene2256	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11275
RY45_11280	RY45_11280		RY45_11280	2454921	2455694	+	NAD-dependent deacetylase		gene	gene2257	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11280
RY45_11285	RY45_11285		RY45_11285	2455784	2456260	+	hypothetical protein		gene	gene2258	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11285
RY45_11290	RY45_11290		RY45_11290	2456260	2457909	+	diguanylate cyclase		gene	gene2259	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11290
RY45_11295	RY45_11295		RY45_11295	2457997	2459001	-	transcriptional regulator		gene	gene2260	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11295
RY45_11300	RY45_11300		RY45_11300	2459001	2459933	-	ribokinase	catalyzes the formation of D-ribose 5-phosphate from ribose	gene	gene2261	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11300
RY45_11305	RY45_11305		RY45_11305	2460041	2460916	-	D-ribose transporter subunit RbsB	periplasmic substrate-binding component of the ATP-dependent ribose transport system	gene	gene2262	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11305
RY45_11310	RY45_11310	rbsC	rbsC	2460938	2461903	-	ribose ABC transporter permease	functions to transport ribose at high affinity%3B forms a complex with RbsA2C2B	gene	gene2263	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11310
RY45_11315	RY45_11315		RY45_11315	2461900	2463432	-	sugar ABC transporter ATP-binding protein		gene	gene2264	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11315
RY45_11320	RY45_11320		RY45_11320	2463451	2463870	-	D-ribose pyranase	cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source	gene	gene2265	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11320
RY45_11325	RY45_11325		RY45_11325	2464075	2464692	-	glutathione S-transferase		gene	gene2266	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11325
RY45_11330	RY45_11330		RY45_11330	2464935	2465699	+	hypothetical protein		gene	gene2267	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11330
RY45_11335	RY45_11335		RY45_11335	2465771	2466448	+	hypothetical protein		gene	gene2268	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11335
RY45_11340	RY45_11340		RY45_11340	2466532	2467440	-	tRNA 2-thiocytidine biosynthesis protein TtcA		gene	gene2269	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11340
RY45_11345	RY45_11345		RY45_11345	2467508	2468452	-	universal stress protein UspE	with UspC and UspD is involved in resistance to UV irradiation	gene	gene2270	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11345
RY45_11350	RY45_11350		RY45_11350	2468587	2469342	-	transcriptional regulator	Global transcription factor that controls the expression of over 100 target genes in response to anoxia	gene	gene2271	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11350
RY45_11355	RY45_11355		RY45_11355	2469411	2470097	-	cytochrome biogenesis protein		gene	gene2272	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11355
RY45_11360	RY45_11360		RY45_11360	2470081	2470272	-	cytochrome oxidase maturation protein Cbb3		gene	gene2273	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11360
RY45_11365	RY45_11365		RY45_11365	2470400	2472799	-	ATPase P		gene	gene2274	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11365
RY45_11370	RY45_11370		RY45_11370	2472892	2473380	-	Cbb3-type cytochrome oxidase assembly protein CcoH		gene	gene2275	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11370
RY45_11375	RY45_11375		RY45_11375	2473499	2474488	-	cytochrome Cbb3		gene	gene2276	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11375
RY45_11380	RY45_11380		RY45_11380	2474488	2474667	-	cytochrome oxidase		gene	gene2277	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11380
RY45_11385	RY45_11385		RY45_11385	2474680	2475294	-	peptidase S41		gene	gene2278	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11385
RY45_11390	RY45_11390		RY45_11390	2475311	2476735	-	cbb3-type cytochrome c oxidase subunit I	CcoN%3B FixN	gene	gene2279	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11390
RY45_11395	RY45_11395		RY45_11395	2477019	2477477	+	hypothetical protein		gene	gene2280	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11395
RY45_11400	RY45_11400		RY45_11400	2477588	2478046	+	Free methionine-(R)-sulfoxide reductase		gene	gene2281	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11400
RY45_11405	RY45_11405		RY45_11405	2478148	2478786	+	osmoprotectant transporter ProQ		gene	gene2282	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11405
RY45_11410	RY45_11410		RY45_11410	2478795	2480810	+	carboxy-terminal protease	Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3	gene	gene2283	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11410
RY45_11415	RY45_11415	pepN	pepN	2480945	2483569	+	aminopeptidase N		gene	gene2284	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11415
RY45_11420	RY45_11420		RY45_11420	2483642	2483863	+	hypothetical protein		gene	gene2285	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11420
RY45_11425	RY45_11425		RY45_11425	2484142	2488980	+	NAD-glutamate dehydrogenase		gene	gene2286	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11425
RY45_11430	RY45_11430		RY45_11430	2489057	2490067	+	dihydroorotate dehydrogenase	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors	gene	gene2287	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11430
RY45_11435	RY45_11435		RY45_11435	2490155	2490691	+	cell division protein ZapC		gene	gene2288	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11435
RY45_11440	RY45_11440	rlmL	rlmL	2491370	2493541	+	23S rRNA methyltransferase	catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA	gene	gene2289	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11440
RY45_11445	RY45_11445		RY45_11445	2493541	2493771	+	glutaredoxin		gene	gene2290	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11445
RY45_11450	RY45_11450		RY45_11450	2493846	2495768	+	ABC transporter ATPase	Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth	gene	gene2291	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11450
RY45_11455	RY45_11455		RY45_11455	2495777	2497414	+	membrane protein		gene	gene2292	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11455
RY45_11460	RY45_11460		RY45_11460	2497836	2498396	-	3-hydroxydecanoyl-ACP dehydratase	catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP	gene	gene2293	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11460
RY45_11465	RY45_11465		RY45_11465	2498478	2500457	-	peptidase S16		gene	gene2294	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11465
RY45_11470	RY45_11470		RY45_11470	2500669	2501946	-	integrase		gene	gene2295	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11470
RY45_11475	RY45_11475		RY45_11475	2502225	2502539	-	multidrug DMT transporter permease		gene	gene2296	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11475
RY45_11480	RY45_11480		RY45_11480	2502712	2503608	+	lipase		gene	gene2297	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11480
RY45_11485	RY45_11485		RY45_11485	2503658	2505628	-	short-chain dehydrogenase		gene	gene2298	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11485
RY45_11490	RY45_11490		RY45_11490	2505877	2506458	+	phosphohistidine phosphatase		gene	gene2299	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11490
RY45_11495	RY45_11495		RY45_11495	2506547	2507731	+	patatin		gene	gene2300	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11495
RY45_11500	RY45_11500		RY45_11500	2507733	2508383	+	TetR family transcriptional regulator		gene	gene2301	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11500
RY45_11505	RY45_11505		RY45_11505	2508426	2509226	+	hypothetical protein		gene	gene2302	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11505
RY45_11510	RY45_11510		RY45_11510	2509343	2510767	-	acyltransferase		gene	gene2303	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11510
RY45_11515	RY45_11515		RY45_11515	2511050	2511382	-	poly (3-hydroxybutyrate) depolymerase		gene	gene2304	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11515
RY45_11520	RY45_11520		RY45_11520	2511627	2512370	+	hypothetical protein		gene	gene2305	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11520
RY45_11525	RY45_11525	prpD	prpD	2512455	2513900	-	2-methylcitrate dehydratase	functions in propionate metabolism%3B involved in isomerization of (2S%2C3S)-methylcitrate to (2R%2C3S)-methylisocitrate%3B also encodes minor aconitase or dehydratase activity%3B aconitase C	gene	gene2306	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11525
RY45_11530	RY45_11530		RY45_11530	2514030	2515157	-	methylcitrate synthase	catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate%3B also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity	gene	gene2307	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11530
RY45_11535	RY45_11535	prpB	prpB	2515169	2516056	-	2-methylisocitrate lyase	catalyzes the formation of pyruvate and succinate from 2-methylisocitrate	gene	gene2308	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11535
RY45_11540	RY45_11540		RY45_11540	2516205	2516837	+	paraquat-inducible protein A		gene	gene2309	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11540
RY45_11545	RY45_11545		RY45_11545	2516815	2517423	+	paraquat-inducible protein A		gene	gene2310	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11545
RY45_11550	RY45_11550		RY45_11550	2517501	2520053	+	mammalian cell entry protein		gene	gene2311	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11550
RY45_11555	RY45_11555	yebU	yebU	2520174	2521601	+	RNA methyltransferase RsmF	in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA	gene	gene2312	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11555
RY45_11560	RY45_11560		RY45_11560	2521738	2522109	+	hypothetical protein		gene	gene2313	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11560
RY45_11565	RY45_11565		RY45_11565	2522271	2523299	-	recombinase		gene	gene2314	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11565
RY45_11570	RY45_11570		RY45_11570	2523598	2524377	-	DNAse		gene	gene2315	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11570
RY45_11575	RY45_11575		RY45_11575	2524399	2525346	-	ATPase AAA		gene	gene2316	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11575
RY45_11580	RY45_11580		RY45_11580	2525331	2525972	-	thymidylate kinase		gene	gene2317	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11580
RY45_11585	RY45_11585		RY45_11585	2525972	2526973	-	ABC transporter substrate-binding protein		gene	gene2318	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11585
RY45_11590	RY45_11590		RY45_11590	2526963	2527817	-	4-amino-4-deoxychorismate lyase	catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate	gene	gene2319	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11590
RY45_11595	RY45_11595		RY45_11595	2527837	2529078	-	3-oxoacyl-ACP synthase	FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP	gene	gene2320	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11595
RY45_11600	RY45_11600		RY45_11600	2529161	2529397	-	acyl carrier protein	carries the fatty acid chain in fatty acid biosynthesis	gene	gene2321	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11600
RY45_11605	RY45_11605	fabG	fabG	2529555	2530289	-	3-ketoacyl-ACP reductase	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis	gene	gene2322	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11605
RY45_11610	RY45_11610		RY45_11610	2530303	2531238	-	malonyl CoA-ACP transacylase		gene	gene2323	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11610
RY45_11615	RY45_11615		RY45_11615	2531308	2532267	-	3-oxoacyl-ACP synthase	FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs	gene	gene2324	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11615
RY45_11620	RY45_11620		RY45_11620	2532275	2533294	-	phosphate acyltransferase		gene	gene2325	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11620
RY45_11625	RY45_11625	rpmF	rpmF	2533304	2533471	-	50S ribosomal protein L32	some L32 proteins have zinc finger motifs consisting of CXXC while others do not	gene	gene2326	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11625
RY45_11630	RY45_11630		RY45_11630	2533491	2534012	-	ribosomal protein L32p		gene	gene2327	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11630
RY45_11635	RY45_11635		RY45_11635	2534261	2534926	-	hypothetical protein		gene	gene2328	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11635
RY45_11640	RY45_11640		RY45_11640	2534996	2535970	-	transcriptional regulator	Involved in anaerobic NO protection	gene	gene2329	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11640
RY45_11645	RY45_11645		RY45_11645	2535973	2537166	-	major facilitator transporter		gene	gene2330	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11645
RY45_11650	RY45_11650		RY45_11650	2537354	2537935	+	septum formation inhibitor Maf		gene	gene2331	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11650
RY45_11655	RY45_11655		RY45_11655	2538013	2538660	-	HAD family hydrolase		gene	gene2332	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11655
RY45_11660	RY45_11660		RY45_11660	2538660	2539643	-	23S rRNA pseudouridylate synthase		gene	gene2333	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11660
RY45_11665	RY45_11665		RY45_11665	2540016	2543147	+	ribonuclease		gene	gene2334	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11665
RY45_11670	RY45_11670		RY45_11670	2543975	2545444	-	nuclease PIN		gene	gene2335	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11670
RY45_11675	RY45_11675		RY45_11675	2545852	2546433	-	deoxycytidine triphosphate deaminase		gene	gene2336	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11675
RY45_11680	RY45_11680		RY45_11680	2546497	2547141	-	uridine kinase		gene	gene2337	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11680
RY45_11685	RY45_11685		RY45_11685	2547251	2548333	-	sodium:proton antiporter		gene	gene2338	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11685
RY45_11690	RY45_11690	metG	metG	2548520	2550553	+	methionine--tRNA ligase	methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content	gene	gene2339	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11690
RY45_11695	RY45_11695		RY45_11695	2550772	2551407	+	glutathione S-transferase		gene	gene2340	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11695
RY45_11700	RY45_11700		RY45_11700	2551492	2551764	-	acylphosphatase		gene	gene2341	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11700
RY45_11705	RY45_11705		RY45_11705	2551850	2553280	+	chemotaxis protein		gene	gene2342	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11705
RY45_11710	RY45_11710		RY45_11710	2553386	2554579	+	23S rRNA methyltransferase	SAM-dependent%3Bcatalyzes the methylation of cytosine at position 1962 of the 23S rRNA	gene	gene2343	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11710
RY45_11715	RY45_11715		RY45_11715	2555061	2555705	-	glutathione S-transferase		gene	gene2344	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11715
RY45_11720	RY45_11720		RY45_11720	2555966	2557150	+	acyltransferase		gene	gene2345	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11720
RY45_11725	RY45_11725		RY45_11725	2557252	2557470	-	hypothetical protein		gene	gene2346	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11725
RY45_11730	RY45_11730		RY45_11730	2557536	2558573	+	selenide%2C water dikinase		gene	gene2347	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11730
RY45_11735	RY45_11735		RY45_11735	2558570	2559670	+	tRNA 2-selenouridine synthase	catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA	gene	gene2348	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11735
RY45_11740	RY45_11740		RY45_11740	2559698	2560342	+	hypothetical protein		gene	gene2349	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11740
RY45_11745	RY45_11745		RY45_11745	2560332	2561333	-	chemotaxis protein CheY		gene	gene2350	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11745
RY45_11750	RY45_11750		RY45_11750	2561330	2564500	-	chemotaxis protein CheY		gene	gene2351	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11750
RY45_11755	RY45_11755		RY45_11755	2564706	2564993	-	50S ribosomal protein L25		gene	gene2352	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11755
RY45_11760	RY45_11760		RY45_11760	2565100	2565966	-	hypothetical protein		gene	gene2353	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11760
RY45_11765	RY45_11765		RY45_11765	2566033	2569947	-	ATP-dependent helicase HrpA	involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain	gene	gene2354	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11765
RY45_11770	RY45_11770		RY45_11770	2570161	2570583	-	CBS domain containing protein		gene	gene2355	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11770
RY45_11775	RY45_11775		RY45_11775	2570668	2571738	-	LuxR family transcriptional regulator		gene	gene2356	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11775
RY45_11780	RY45_11780		RY45_11780	2572780	2574468	+	dolichyl-phosphate-mannose-protein mannosyltransferase		gene	gene2357	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11780
RY45_11785	RY45_11785		RY45_11785	2574657	2574986	-	nucleoid-associated protein		gene	gene2358	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11785
RY45_11790	RY45_11790		RY45_11790	2575102	2577648	-	DNA polymerase III subunit gamma/tau		gene	gene2359	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11790
RY45_11795	RY45_11795		RY45_11795	2577831	2578376	-	adenine phosphoribosyltransferase		gene	gene2360	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11795
RY45_11800	RY45_11800		RY45_11800	2578508	2578885	-	membrane protein		gene	gene2361	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11800
RY45_11805	RY45_11805		RY45_11805	2579094	2580038	+	tRNA-dihydrouridine synthase C		gene	gene2362	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11805
RY45_11810	RY45_11810		RY45_11810	2580136	2580504	+	DksA-type zinc finger protein		gene	gene2363	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11810
RY45_11815	RY45_11815		RY45_11815	2580599	2581357	+	ABC transporter substrate-binding protein		gene	gene2364	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11815
RY45_11820	RY45_11820		RY45_11820	2581405	2582544	-	ribonuclease D		gene	gene2365	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11820
RY45_11825	RY45_11825		RY45_11825	2582614	2584305	-	long-chain fatty acid--CoA ligase	Activates fatty acids by binding to coenzyme A	gene	gene2366	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11825
RY45_11830	RY45_11830		RY45_11830	2584489	2585355	-	alpha/beta hydrolase		gene	gene2367	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11830
RY45_11835	RY45_11835		RY45_11835	2585364	2585879	-	membrane protein		gene	gene2368	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11835
RY45_11840	RY45_11840		RY45_11840	2585974	2586675	-	hypothetical protein		gene	gene2369	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11840
RY45_11845	RY45_11845		RY45_11845	2586785	2588707	-	ATP-dependent helicase		gene	gene2370	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11845
RY45_11850	RY45_11850		RY45_11850	2588775	2589017	-	hypothetical protein		gene	gene2371	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11850
RY45_11855	RY45_11855	hisG	hisG	2589357	2590253	+	ATP phosphoribosyltransferase	long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors	gene	gene2372	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11855
RY45_11860	RY45_11860	hisD	hisD	2590266	2591591	+	histidinol dehydrogenase	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer	gene	gene2373	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11860
RY45_11865	RY45_11865		RY45_11865	2591588	2592658	+	histidinol-phosphate aminotransferase	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis	gene	gene2374	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11865
RY45_11870	RY45_11870		RY45_11870	2592674	2593825	+	imidazoleglycerol-phosphate dehydratase	catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate	gene	gene2375	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11870
RY45_11875	RY45_11875		RY45_11875	2593825	2594460	+	imidazole glycerol phosphate synthase		gene	gene2376	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11875
RY45_11880	RY45_11880		RY45_11880	2594466	2595209	+	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase		gene	gene2377	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11880
RY45_11885	RY45_11885		RY45_11885	2595375	2596484	+	transcriptional regulator		gene	gene2378	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11885
RY45_11890	RY45_11890		RY45_11890	2596477	2598630	+	diguanylate cyclase		gene	gene2379	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11890
RY45_11895	RY45_11895		RY45_11895	2598627	2602598	+	chemotaxis protein CheY		gene	gene2380	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11895
RY45_11900	RY45_11900		RY45_11900	2602779	2603552	+	imidazole glycerol phosphate synthase		gene	gene2381	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11900
RY45_11905	RY45_11905		RY45_11905	2603545	2604180	+	phosphoribosyl-ATP pyrophosphatase	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis	gene	gene2382	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11905
RY45_11910	RY45_11910		RY45_11910	2604271	2604591	-	hypothetical protein		gene	gene2383	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11910
RY45_11915	RY45_11915	DeoR faimly transcriptional regulator	DeoR faimly transcriptional regulator	2604658	2605356	-		disrupted	pseudogene	gene2384	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11915
RY45_11920	RY45_11920		RY45_11920	2605550	2607172	-	acyl-CoA synthetase	activates fatty acids by binding to coenzyme A	gene	gene2385	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11920
RY45_11925	RY45_11925		RY45_11925	2607808	2609334	+	hypothetical protein		gene	gene2386	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11925
RY45_11930	RY45_11930		RY45_11930	2609395	2609583	-	hypothetical protein		gene	gene2387	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11930
RY45_11935	RY45_11935		RY45_11935	2610089	2610634	+	hypothetical protein		gene	gene2388	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11935
RY45_11940	RY45_11940		RY45_11940	2610762	2613980	-	nuclease		gene	gene2389	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11940
RY45_11945	RY45_11945		RY45_11945	2614510	2614995	-	xanthine dehydrogenase		gene	gene2390	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11945
RY45_11950	RY45_11950		RY45_11950	2614992	2615870	-	xanthine dehydrogenase	FAD-binding subunit%3B with XdhA and XdhC participates in purine salvage	gene	gene2391	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11950
RY45_11955	RY45_11955		RY45_11955	2615863	2618181	-	xanthine dehydrogenase	molybdenum cofactor-binding protein%3B participates in purine salvage	gene	gene2392	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11955
RY45_11960	RY45_11960		RY45_11960	2618513	2619886	-	permase		gene	gene2393	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11960
RY45_11965	RY45_11965		RY45_11965	2620172	2621488	-	guanine deaminase	Catalyzes the deamination of guanine	gene	gene2394	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11965
RY45_11970	RY45_11970		RY45_11970	2621513	2623039	-	xanthine permease XanP	high-affinity transporter for xanthine	gene	gene2395	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11970
RY45_11975	RY45_11975		RY45_11975	2623135	2626029	-	hypoxanthine oxidase		gene	gene2396	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11975
RY45_11980	RY45_11980		RY45_11980	2626029	2626805	-	oxidoreductase		gene	gene2397	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11980
RY45_11985	RY45_11985		RY45_11985	2626886	2628214	-	chlorohydrolase	in Escherichia coli expression is induced in response to phase-specific signals and controlled by RpoS	gene	gene2398	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11985
RY45_11990	RY45_11990		RY45_11990	2628245	2631355	-	selenate reductase subunit YgfK	with YgfM and YgfN forms a selenate reductase%2C which seems to catalyze the reduction of selenate to selenite%3B YgfK mutants are unable to reduce selenate%3B involved in purine salvage process%3B seems to act as an oxidoreductase%2C but sequence similarity suggests it is a dihydrothymine dehydrogenase	gene	gene2399	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11990
RY45_11995	RY45_11995		RY45_11995	2631776	2632291	-	molybdenum cofactor cytidylyltransferase		gene	gene2400	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_11995
RY45_12000	RY45_12000		RY45_12000	2632410	2633246	+	hypothetical protein		gene	gene2401	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12000
RY45_12005	RY45_12005		RY45_12005	2633286	2634878	+	hypothetical protein		gene	gene2402	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12005
RY45_12010	RY45_12010		RY45_12010	2634947	2635870	-	permease		gene	gene2403	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12010
RY45_12015	RY45_12015		RY45_12015	2636054	2636986	-	carbamate kinase		gene	gene2404	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12015
RY45_12020	RY45_12020		RY45_12020	2637082	2638506	-	phenylhydantoinase	catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position	gene	gene2405	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12020
RY45_12025	RY45_12025		RY45_12025	2638623	2639840	-	peptidase	Zn-dependent extracellular dipeptidase%3B similar to succinyl-diaminopimelate desuccinylases	gene	gene2406	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12025
RY45_12030	RY45_12030		RY45_12030	2639964	2641163	-	diaminopropionate ammonia-lyase	catalyzes the formation of pyruvate from 2%2C3-diaminopropionate	gene	gene2407	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12030
RY45_12035	RY45_12035		RY45_12035	2641291	2642478	-	ornithine carbamoyltransferase		gene	gene2408	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12035
RY45_12040	RY45_12040		RY45_12040	2642907	2644841	-	Fis family transcriptional regulator		gene	gene2409	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12040
RY45_12045	RY45_12045		RY45_12045	2644949	2645326	+	hypothetical protein		gene	gene2410	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12045
RY45_12050	RY45_12050		RY45_12050	2646473	2647357	-	transporter		gene	gene2411	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12050
RY45_12055	RY45_12055		RY45_12055	2647369	2647926	-	hypothetical protein		gene	gene2412	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12055
RY45_12060	RY45_12060	fadJ	fadJ	2648554	2650701	-	multifunctional fatty acid oxidation complex subunit alpha	multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate	gene	gene2413	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12060
RY45_12065	RY45_12065		RY45_12065	2650701	2652011	-	3-ketoacyl-CoA thiolase		gene	gene2414	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12065
RY45_12070	RY45_12070		RY45_12070	2652205	2653155	+	ATPase AAA		gene	gene2415	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12070
RY45_12075	RY45_12075		RY45_12075	2653190	2654080	+	hypothetical protein		gene	gene2416	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12075
RY45_12080	RY45_12080		RY45_12080	2654065	2654640	+	hypothetical protein		gene	gene2417	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12080
RY45_12085	RY45_12085		RY45_12085	2654637	2655650	+	von Willebrand factor A		gene	gene2418	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12085
RY45_12090	RY45_12090		RY45_12090	2655650	2657146	+	von Willebrand factor A		gene	gene2419	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12090
RY45_12095	RY45_12095		RY45_12095	2657143	2658663	+	hypothetical protein		gene	gene2420	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12095
RY45_12100	RY45_12100		RY45_12100	2658772	2659287	+	RNA polymerase sigma factor	Bacteria have multiple sigma factors which are active under specific conditions%3B the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription	gene	gene2421	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12100
RY45_12105	RY45_12105		RY45_12105	2659280	2660023	+	hypothetical protein		gene	gene2422	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12105
RY45_12110	RY45_12110		RY45_12110	2660434	2661732	+	long-chain fatty acid outer membrane transporter		gene	gene2423	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12110
RY45_12115	RY45_12115		RY45_12115	2661986	2663242	+	long-chain fatty acid transporter		gene	gene2424	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12115
RY45_12120	RY45_12120		RY45_12120	2663372	2664595	+	diguanylate phosphodiesterase		gene	gene2425	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12120
RY45_12125	RY45_12125		RY45_12125	2664592	2665755	-	acetyl-CoA acetyltransferase		gene	gene2426	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12125
RY45_12130	RY45_12130		RY45_12130	2665877	2666272	+	MerR family transcriptional regulator		gene	gene2427	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12130
RY45_12135	RY45_12135		RY45_12135	2666333	2667571	-	amino acid:proton symporter		gene	gene2428	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12135
RY45_12140	RY45_12140		RY45_12140	2667841	2668125	+	hypothetical protein		gene	gene2429	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12140
RY45_12145	RY45_12145		RY45_12145	2668329	2669711	+	serine dehydratase		gene	gene2430	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12145
RY45_12150	RY45_12150		RY45_12150	2669989	2671359	+	serine dehydratase	catalyzes the formation of pyruvate from serine	gene	gene2431	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12150
RY45_12155	RY45_12155		RY45_12155	2671579	2672523	-	lytic transglycosylase		gene	gene2432	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12155
RY45_12160	RY45_12160		RY45_12160	2672520	2672801	-	hypothetical protein		gene	gene2433	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12160
RY45_12165	RY45_12165	minC	minC	2672909	2673631	+	septum formation inhibitor	blocks the formation of polar Z-ring septums	gene	gene2434	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12165
RY45_12170	RY45_12170		RY45_12170	2673650	2674462	+	cell division inhibitor MinD	ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums	gene	gene2435	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12170
RY45_12175	RY45_12175		RY45_12175	2674465	2674731	+	cell division topological specificity factor		gene	gene2436	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12175
RY45_12180	RY45_12180		RY45_12180	2674920	2675246	+	hypothetical protein		gene	gene2437	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12180
RY45_12185	RY45_12185		RY45_12185	2675231	2676013	+	peptidoglycan transglycosylase		gene	gene2438	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12185
RY45_12190	RY45_12190		RY45_12190	2676312	2676635	+	dsDNA-mimic protein		gene	gene2439	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12190
RY45_12195	RY45_12195		RY45_12195	2676677	2676988	-	hypothetical protein		gene	gene2440	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12195
RY45_12200	RY45_12200		RY45_12200	2676989	2677861	-	nucleotide-binding protein		gene	gene2441	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12200
RY45_12205	RY45_12205		RY45_12205	2678074	2679288	+	hypothetical protein		gene	gene2442	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12205
RY45_12210	RY45_12210		RY45_12210	2679457	2679927	+	MarR family transcriptional regulator		gene	gene2443	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12210
RY45_12215	RY45_12215		RY45_12215	2679924	2680112	+	hypothetical protein		gene	gene2444	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12215
RY45_12220	RY45_12220		RY45_12220	2680276	2680455	+	hypothetical protein		gene	gene2445	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12220
RY45_12225	RY45_12225		RY45_12225	2680551	2681138	-	FMN-dependent NADH-azoreductase	FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds	gene	gene2446	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12225
RY45_12230	RY45_12230		RY45_12230	2681304	2682254	+	membrane protein		gene	gene2447	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12230
RY45_12235	RY45_12235		RY45_12235	2682340	2683518	+	phosphoribosylglycinamide formyltransferase 2		gene	gene2448	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12235
RY45_12240	RY45_12240		RY45_12240	2683647	2684306	+	2-deoxyglucose-6-phosphatase	YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate	gene	gene2449	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12240
RY45_12245	RY45_12245		RY45_12245	2684445	2684648	+	Zn-ribbon protein		gene	gene2450	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12245
RY45_12250	RY45_12250		RY45_12250	2684738	2685355	-	riboflavin synthase subunit alpha		gene	gene2451	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12250
RY45_12255	RY45_12255		RY45_12255	2685486	2685692	+	hypothetical protein		gene	gene2452	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12255
RY45_12260	RY45_12260		RY45_12260	2685839	2687218	+	multidrug transporter MatE		gene	gene2453	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12260
RY45_12265	RY45_12265		RY45_12265	2687379	2687455	+	tRNA-Val		tRNA	gene2454	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12265
RY45_12270	RY45_12270		RY45_12270	2687468	2687544	+	tRNA-Val		tRNA	gene2455	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12270
RY45_12275	RY45_12275		RY45_12275	2687562	2687638	+	tRNA-Val		tRNA	gene2456	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12275
RY45_12280	RY45_12280		RY45_12280	2687697	2687773	+	tRNA-Val		tRNA	gene2457	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12280
RY45_12285	RY45_12285		RY45_12285	2687811	2687887	+	tRNA-Val		tRNA	gene2458	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12285
RY45_12290	RY45_12290		RY45_12290	2688022	2690451	-	DNA polymerase II	Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C	gene	gene2459	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12290
RY45_12295	RY45_12295		RY45_12295	2690665	2691156	+	prolyl-tRNA synthetase		gene	gene2460	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12295
RY45_12300	RY45_12300		RY45_12300	2691365	2692603	+	diguanylate cyclase		gene	gene2461	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12300
RY45_12305	RY45_12305		RY45_12305	2692603	2693136	+	acetyltransferase		gene	gene2462	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12305
RY45_12310	RY45_12310		RY45_12310	2693188	2694048	-	kinase		gene	gene2463	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12310
RY45_12315	RY45_12315		RY45_12315	2694190	2695185	-	lipid A biosynthesis acyltransferase		gene	gene2464	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12315
RY45_12320	RY45_12320		RY45_12320	2695358	2696347	-	lipid A biosynthesis acyltransferase		gene	gene2465	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12320
RY45_12325	RY45_12325		RY45_12325	2696615	2697598	-	C4-dicarboxylate ABC transporter		gene	gene2466	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12325
RY45_12330	RY45_12330		RY45_12330	2697698	2698606	+	LysR family transcriptional regulator		gene	gene2467	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12330
RY45_12335	RY45_12335		RY45_12335	2698721	2699710	-	oxidoreductase		gene	gene2468	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12335
RY45_12340	RY45_12340		RY45_12340	2699744	2700589	-	endonuclease IV	Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues	gene	gene2469	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12340
RY45_12345	RY45_12345		RY45_12345	2700754	2701707	-	transcriptional regulator		gene	gene2470	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12345
RY45_12350	RY45_12350		RY45_12350	2701834	2702589	+	short-chain dehydrogenase		gene	gene2471	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12350
RY45_12355	RY45_12355		RY45_12355	2702635	2703924	-	phosphodiesterase		gene	gene2472	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12355
RY45_12360	RY45_12360		RY45_12360	2704229	2704714	+	molybdopterin-binding oxidoreductase		gene	gene2473	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12360
RY45_12365	RY45_12365		RY45_12365	2704717	2706639	+	diguanylate phosphodiesterase		gene	gene2474	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12365
RY45_12370	RY45_12370		RY45_12370	2706753	2708186	-	aryl-phospho-beta-D-glucosidase		gene	gene2475	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12370
RY45_12375	RY45_12375		RY45_12375	2708344	2709246	+	transcriptional regulator		gene	gene2476	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12375
RY45_12380	RY45_12380		RY45_12380	2710431	2711879	-	hypothetical protein		gene	gene2477	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12380
RY45_12385	RY45_12385		RY45_12385	2712018	2712575	-	integrase		gene	gene2478	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12385
RY45_12390	RY45_12390		RY45_12390	2713438	2713806	-	hypothetical protein		gene	gene2479	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12390
RY45_12395	RY45_12395		RY45_12395	2713803	2714270	-	DNA repair protein RadC		gene	gene2480	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12395
RY45_12400	RY45_12400		RY45_12400	2715140	2718313	-	Restriction endonuclease%2C type I%2C EcoRI%2C R subunit/Type III		gene	gene2481	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12400
RY45_12405	RY45_12405		RY45_12405	2719144	2720400	-	hypothetical protein		gene	gene2482	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12405
RY45_12410	RY45_12410	hypothetical protein	hypothetical protein	2720421	2721275	-		disrupted	pseudogene	gene2483	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12410
RY45_12415	RY45_12415		RY45_12415	2721806	2723782	-	restriction endonuclease subunit M		gene	gene2484	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12415
RY45_12420	RY45_12420	DNA primase	DNA primase	2724598	2727156	+		disrupted	pseudogene	gene2485	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12420
RY45_12425	RY45_12425	hypothetical protein	hypothetical protein	2727373	2727984	-		disrupted	pseudogene	gene2486	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12425
RY45_12430	RY45_12430		RY45_12430	2728012	2728467	-	hypothetical protein		gene	gene2487	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12430
RY45_12435	RY45_12435	hypothetical protein	hypothetical protein	2728541	2728780	-		disrupted	pseudogene	gene2488	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12435
RY45_12440	RY45_12440		RY45_12440	2728869	2729987	-	integrase		gene	gene2489	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12440
RY45_12445	RY45_12445		RY45_12445	2730271	2731059	-	membrane protein		gene	gene2490	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12445
RY45_12450	RY45_12450		RY45_12450	2731149	2732585	-	amino acid APC transporter		gene	gene2491	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12450
RY45_12455	RY45_12455	fabG	fabG	2732975	2733736	-	3-ketoacyl-ACP reductase	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis	gene	gene2492	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12455
RY45_12460	RY45_12460		RY45_12460	2733808	2734728	-	3-hydroxyisobutyrate dehydrogenase		gene	gene2493	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12460
RY45_12465	RY45_12465		RY45_12465	2734756	2735859	-	crotonase		gene	gene2494	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12465
RY45_12470	RY45_12470		RY45_12470	2735919	2736731	-	enoyl-CoA hydratase		gene	gene2495	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12470
RY45_12475	RY45_12475		RY45_12475	2736872	2738029	-	acyl-CoA dehydrogenase		gene	gene2496	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12475
RY45_12480	RY45_12480		RY45_12480	2738095	2739606	-	methylmalonate-semialdehyde dehydrogenase		gene	gene2497	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12480
RY45_12485	RY45_12485		RY45_12485	2739852	2741000	+	isovaleryl-CoA dehydrogenase	catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA	gene	gene2498	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12485
RY45_12490	RY45_12490		RY45_12490	2740997	2742598	+	methylcrotonoyl-CoA carboxylase		gene	gene2499	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12490
RY45_12495	RY45_12495		RY45_12495	2742608	2743447	+	crotonase		gene	gene2500	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12495
RY45_12500	RY45_12500		RY45_12500	2743444	2745408	+	methylcrotonoyl-CoA carboxylase		gene	gene2501	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12500
RY45_12505	RY45_12505		RY45_12505	2745405	2746361	+	hydroxymethylglutaryl-CoA lyase		gene	gene2502	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12505
RY45_12510	RY45_12510		RY45_12510	2746373	2746795	+	MerR family transcriptional regulator		gene	gene2503	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12510
RY45_12515	RY45_12515		RY45_12515	2746833	2747594	+	ABC transporter substrate-binding protein		gene	gene2504	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12515
RY45_12520	RY45_12520		RY45_12520	2747643	2750543	+	hypothetical protein		gene	gene2505	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12520
RY45_12525	RY45_12525		RY45_12525	2751226	2751822	+	hypothetical protein		gene	gene2506	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12525
RY45_12530	RY45_12530		RY45_12530	2751905	2752714	-	hypothetical protein		gene	gene2507	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12530
RY45_12535	RY45_12535		RY45_12535	2752733	2753170	-	GCN5 family acetyltransferase		gene	gene2508	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12535
RY45_12540	RY45_12540		RY45_12540	2753485	2754984	+	sodium:alanine symporter		gene	gene2509	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12540
RY45_12545	RY45_12545	replication protein	replication protein	2755080	2756037	+		disrupted	pseudogene	gene2510	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12545
RY45_12550	RY45_12550	hypothetical protein	hypothetical protein	2756034	2756258	+		disrupted	pseudogene	gene2511	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12550
RY45_12555	RY45_12555	protein UmuC	protein UmuC	2759340	2759588	-		disrupted	pseudogene	gene2512	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12555
RY45_12560	RY45_12560	capsid protein	capsid protein	2759646	2759886	+		disrupted	pseudogene	gene2513	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12560
RY45_12565	RY45_12565		RY45_12565	2759991	2760797	-	enoyl-CoA hydratase		gene	gene2514	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12565
RY45_12570	RY45_12570		RY45_12570	2760974	2762761	+	cyclic nucleotide-binding protein		gene	gene2515	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12570
RY45_12575	RY45_12575		RY45_12575	2762764	2763390	+	DNA polymerase III subunit epsilon	3'-5' exonuclease of DNA polymerase III	gene	gene2516	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12575
RY45_12580	RY45_12580		RY45_12580	2763500	2763811	+	membrane protein		gene	gene2517	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12580
RY45_12585	RY45_12585	actP	actP	2763808	2765463	+	acetate permease	member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake	gene	gene2518	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12585
RY45_12590	RY45_12590		RY45_12590	2765699	2767291	+	ABC transporter ATP-binding protein		gene	gene2519	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12590
RY45_12595	RY45_12595		RY45_12595	2767519	2769432	-	peptidylprolyl isomerase		gene	gene2520	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12595
RY45_12600	RY45_12600		RY45_12600	2769566	2769955	+	hypothetical protein		gene	gene2521	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12600
RY45_12605	RY45_12605		RY45_12605	2770097	2772451	-	DNA-binding protein		gene	gene2522	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12605
RY45_12610	RY45_12610	clpX	clpX	2772593	2773867	-	Clp protease ClpX	binds and unfolds substrates as part of the ClpXP protease	gene	gene2523	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12610
RY45_12615	RY45_12615		RY45_12615	2774014	2774637	-	Clp protease ClpP		gene	gene2524	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12615
RY45_12620	RY45_12620		RY45_12620	2774724	2776034	-	trigger factor		gene	gene2525	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12620
RY45_12625	RY45_12625		RY45_12625	2776463	2776897	+	membrane protein		gene	gene2526	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12625
RY45_12630	RY45_12630		RY45_12630	2776971	2777561	+	5'-nucleotidase		gene	gene2527	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12630
RY45_12635	RY45_12635		RY45_12635	2777648	2778889	-	outer membrane-specific lipoprotein transporter subunit LolE	part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane	gene	gene2528	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12635
RY45_12640	RY45_12640		RY45_12640	2778889	2779587	-	ABC transporter		gene	gene2529	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12640
RY45_12645	RY45_12645		RY45_12645	2779664	2780899	-	transporter		gene	gene2530	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12645
RY45_12650	RY45_12650		RY45_12650	2780976	2781551	+	hypothetical protein		gene	gene2531	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12650
RY45_12655	RY45_12655		RY45_12655	2781561	2785025	+	transcription-repair coupling factor		gene	gene2532	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12655
RY45_12660	RY45_12660		RY45_12660	2785112	2786146	-	fructose 1%2C6-bisphosphatase	catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate	gene	gene2533	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12660
RY45_12665	RY45_12665		RY45_12665	2786531	2788147	+	peptide ABC transporter substrate-binding protein	is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate	gene	gene2534	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12665
RY45_12670	RY45_12670		RY45_12670	2788197	2789114	-	multidrug DMT transporter		gene	gene2535	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12670
RY45_12675	RY45_12675		RY45_12675	2789316	2789522	-	hypothetical protein		gene	gene2536	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12675
RY45_12680	RY45_12680		RY45_12680	2789656	2790123	-	phosphohistidine phosphatase		gene	gene2537	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12680
RY45_12685	RY45_12685		RY45_12685	2790286	2793060	+	peptidase M16		gene	gene2538	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12685
RY45_12690	RY45_12690		RY45_12690	2793369	2794022	-	thiopurine S-methyltransferase		gene	gene2539	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12690
RY45_12695	RY45_12695		RY45_12695	2794238	2795587	-	protein kinase		gene	gene2540	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12695
RY45_12700	RY45_12700		RY45_12700	2795912	2796676	+	short-chain dehydrogenase		gene	gene2541	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12700
RY45_12705	RY45_12705		RY45_12705	2796728	2797555	+	6-O-methylguanine DNA methyltransferase		gene	gene2542	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12705
RY45_12710	RY45_12710		RY45_12710	2799337	2799915	-	hypothetical protein		gene	gene2543	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12710
RY45_12715	RY45_12715		RY45_12715	2800649	2800921	-	hypothetical protein		gene	gene2544	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12715
RY45_12720	RY45_12720	guaA	guaA	2801300	2802889	-	GMP synthase	contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway	gene	gene2545	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12720
RY45_12725	RY45_12725		RY45_12725	2802973	2804436	-	inosine-5-monophosphate dehydrogenase		gene	gene2546	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12725
RY45_12730	RY45_12730		RY45_12730	2804902	2806770	+	potassium transporter Kup		gene	gene2547	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12730
RY45_12735	RY45_12735		RY45_12735	2807021	2807818	+	energy transducer TonB		gene	gene2548	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12735
RY45_12740	RY45_12740		RY45_12740	2807821	2808576	+	biopolymer transporter ExbB		gene	gene2549	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12740
RY45_12745	RY45_12745		RY45_12745	2808576	2808995	+	biopolymer transporter ExbD		gene	gene2550	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12745
RY45_12750	RY45_12750		RY45_12750	2809134	2810063	+	multidrug DMT transporter permease		gene	gene2551	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12750
RY45_12755	RY45_12755	xseA	xseA	2810171	2811535	+	exodeoxyribonuclease VII large subunit	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides	gene	gene2552	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12755
RY45_12760	RY45_12760		RY45_12760	2811610	2812980	-	coproporphyrinogen III oxidase		gene	gene2553	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12760
RY45_12765	RY45_12765		RY45_12765	2813243	2814838	+	chemotaxis protein		gene	gene2554	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12765
RY45_12770	RY45_12770		RY45_12770	2814942	2815997	-	phospho-2-dehydro-3-deoxyheptonate aldolase	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive	gene	gene2555	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12770
RY45_12775	RY45_12775		RY45_12775	2816210	2817493	-	3-phosphoshikimate 1-carboxyvinyltransferase		gene	gene2556	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12775
RY45_12780	RY45_12780		RY45_12780	2817665	2818753	-	3-phosphoserine/phosphohydroxythreonine aminotransferase	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine	gene	gene2557	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12780
RY45_12785	RY45_12785		RY45_12785	2818977	2819903	-	electron transfer flavoprotein subunit beta		gene	gene2558	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12785
RY45_12790	RY45_12790		RY45_12790	2820004	2820753	-	electron transporter RnfB		gene	gene2559	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12790
RY45_12795	RY45_12795		RY45_12795	2820878	2822521	+	electron transfer flavoprotein-ubiquinone oxidoreductase		gene	gene2560	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12795
RY45_12800	RY45_12800		RY45_12800	2823034	2823981	+	magnesium transporter		gene	gene2561	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12800
RY45_12805	RY45_12805		RY45_12805	2824124	2824594	+	membrane protein		gene	gene2562	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12805
RY45_12810	RY45_12810		RY45_12810	2824655	2825407	-	hypothetical protein		gene	gene2563	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12810
RY45_12815	RY45_12815		RY45_12815	2825658	2826887	+	major facilitator transporter		gene	gene2564	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12815
RY45_12820	RY45_12820		RY45_12820	2826945	2828918	+	TonB-dependent receptor		gene	gene2565	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12820
RY45_12825	RY45_12825		RY45_12825	2828986	2830002	+	permease		gene	gene2566	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12825
RY45_12830	RY45_12830		RY45_12830	2830016	2831083	+	permease		gene	gene2567	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12830
RY45_12835	RY45_12835		RY45_12835	2831127	2831930	+	iron-siderophore ABC transporter ATP-binding protein		gene	gene2568	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12835
RY45_12840	RY45_12840		RY45_12840	2831992	2832729	-	phosphopantetheinyl transferase		gene	gene2569	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12840
RY45_12845	RY45_12845		RY45_12845	2832889	2833833	+	ABC transporter substrate-binding protein		gene	gene2570	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12845
RY45_12850	RY45_12850		RY45_12850	2833901	2835463	-	peptide synthetase		gene	gene2571	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12850
RY45_12855	RY45_12855		RY45_12855	2835460	2841759	-	peptide synthetase		gene	gene2572	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12855
RY45_12860	RY45_12860		RY45_12860	2841774	2842523	-	2%2C3-dihydroxybenzoate-2%2C3-dehydrogenase		gene	gene2573	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12860
RY45_12865	RY45_12865		RY45_12865	2842544	2845648	-	peptide synthetase		gene	gene2574	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12865
RY45_12870	RY45_12870		RY45_12870	2845645	2846568	-	isochorismatase	2%2C3 dihydro-2%2C3 dihydroxybenzoate synthase%3B catalyzes the formation of 2%2C3 dihydro-2%2C3 dihydroxybenzoate and pyruvate from isochorismate%3B with Ent DEF is involved in enterobactin synthesis	gene	gene2575	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12870
RY45_12875	RY45_12875	entE	entE	2846592	2848253	-	enterobactin synthase subunit E	bifunctional 2%2C3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase%3B activates the carboxylate group of 2%2C3-dihydroxy-benzoate forming (2%2C3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2%2C3-dihydroxy-benzoate adenylate	gene	gene2576	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12875
RY45_12880	RY45_12880		RY45_12880	2848250	2849443	-	isochorismate synthase		gene	gene2577	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12880
RY45_12885	RY45_12885		RY45_12885	2849769	2850320	+	lipoprotein		gene	gene2578	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12885
RY45_12890	RY45_12890		RY45_12890	2850465	2852465	+	hypothetical protein		gene	gene2579	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12890
RY45_12895	RY45_12895	glgC	glgC	2852536	2853810	-	glucose-1-phosphate adenylyltransferase	catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate	gene	gene2580	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12895
RY45_12900	RY45_12900		RY45_12900	2853999	2855639	+	diguanylate phosphodiesterase		gene	gene2581	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12900
RY45_12905	RY45_12905		RY45_12905	2855602	2856096	-	hypothetical protein		gene	gene2582	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12905
RY45_12910	RY45_12910		RY45_12910	2856265	2856627	-	hypothetical protein		gene	gene2583	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12910
RY45_12915	RY45_12915		RY45_12915	2856814	2858118	-	guanosine kinase	catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP	gene	gene2584	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12915
RY45_12920	RY45_12920		RY45_12920	2858298	2858690	-	hypothetical protein		gene	gene2585	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12920
RY45_12925	RY45_12925		RY45_12925	2858764	2859738	-	ferrochelatase		gene	gene2586	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12925
RY45_12930	RY45_12930		RY45_12930	2859853	2860497	-	adenylate kinase		gene	gene2587	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12930
RY45_12935	RY45_12935		RY45_12935	2860752	2862665	-	heat shock protein 90	molecular chaperone	gene	gene2588	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12935
RY45_12940	RY45_12940	recR	recR	2862900	2863502	-	recombination protein RecR	involved in a recombinational process of DNA repair%2C independent of the recBC complex	gene	gene2589	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12940
RY45_12945	RY45_12945		RY45_12945	2863628	2864485	-	formate dehydrogenase		gene	gene2590	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12945
RY45_12950	RY45_12950		RY45_12950	2864497	2866626	-	ATPase AAA		gene	gene2591	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12950
RY45_12955	RY45_12955		RY45_12955	2866981	2867379	-	hypothetical protein		gene	gene2592	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12955
RY45_12960	RY45_12960		RY45_12960	2867461	2869137	-	formate dehydrogenase		gene	gene2593	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12960
RY45_12965	RY45_12965		RY45_12965	2869186	2869605	-	spermidine/putrescine ABC transporter substrate-binding protein		gene	gene2594	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12965
RY45_12970	RY45_12970		RY45_12970	2869652	2870251	-	electron transporter HydN		gene	gene2595	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12970
RY45_12975	RY45_12975	trkD	trkD	2872255	2874123	+	potassium transport protein Kup	Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH	gene	gene2596	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12975
RY45_12980	RY45_12980		RY45_12980	2874615	2875280	+	electron transporter		gene	gene2597	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12980
RY45_12985	RY45_12985		RY45_12985	2875280	2877163	+	hydrogenase 4 subunit B		gene	gene2598	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12985
RY45_12990	RY45_12990	hycD	hycD	2877165	2878118	+	hydrogenase 3 membrane subunit	formate hydrogenlyase subunit 4%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide	gene	gene2599	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12990
RY45_12995	RY45_12995	hycE	hycE	2878198	2879916	+	hydrogenase 3 large subunit	formate hydrogenlyase subunit 5%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide	gene	gene2600	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_12995
RY45_13000	RY45_13000		RY45_13000	2879926	2880483	+	formate hydrogenlyase complex iron-sulfur subunit	electron transfer protein for hydrogenase-3%3B the formate hydrogenlyase complex comprises of a formate dehydrogenase%2C unidentified electron carriers and hydrogenase-3%3B in this non-energy conserving pathway%2C molecular hydrogen and carbodioxide are released from formate	gene	gene2601	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13000
RY45_13005	RY45_13005		RY45_13005	2880483	2881298	+	hydrogenase		gene	gene2602	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13005
RY45_13010	RY45_13010		RY45_13010	2881291	2881704	+	formate hydrogenlyase maturation protein HycH		gene	gene2603	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13010
RY45_13015	RY45_13015	hycI	hycI	2881704	2882213	+	hydrogenase 3 maturation protease	involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE	gene	gene2604	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13015
RY45_13020	RY45_13020		RY45_13020	2882768	2884204	+	selenocysteine synthase		gene	gene2605	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13020
RY45_13025	RY45_13025		RY45_13025	2884209	2886092	+	ArsR family transcriptional regulator		gene	gene2606	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13025
RY45_13030	RY45_13030		RY45_13030	2886089	2888527	+	hydrogenase maturation protein HypF		gene	gene2607	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13030
RY45_13035	RY45_13035		RY45_13035	2888533	2888784	+	hydrogenase assembly protein HupF		gene	gene2608	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13035
RY45_13040	RY45_13040		RY45_13040	2888778	2889896	+	hydrogenase formation protein HypD		gene	gene2609	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13040
RY45_13045	RY45_13045		RY45_13045	2889982	2890986	+	hydrogenase assembly protein HupF		gene	gene2610	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13045
RY45_13050	RY45_13050		RY45_13050	2891056	2891397	+	hydrogenase nickel incorporation protein HybF		gene	gene2611	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13050
RY45_13055	RY45_13055		RY45_13055	2891399	2892520	+	hypothetical protein		gene	gene2612	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13055
RY45_13060	RY45_13060		RY45_13060	2892850	2893491	-	peptide ABC transporter ATP-binding protein		gene	gene2613	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13060
RY45_13065	RY45_13065		RY45_13065	2893491	2894279	-	peptide ABC transporter ATP-binding protein		gene	gene2614	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13065
RY45_13070	RY45_13070		RY45_13070	2894383	2895195	-	peptide ABC transporter permease		gene	gene2615	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13070
RY45_13075	RY45_13075		RY45_13075	2895185	2896195	-	peptide ABC transporter permease		gene	gene2616	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13075
RY45_13080	RY45_13080		RY45_13080	2896180	2897811	-	nickel ABC transporter substrate-binding protein		gene	gene2617	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13080
RY45_13085	RY45_13085	hydrogenase biosynthesis protein HybE	hydrogenase biosynthesis protein HybE	2897936	2898466	-		disrupted	pseudogene	gene2618	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13085
RY45_13090	RY45_13090	hybD	hybD	2898448	2898978	-	hydrogenase 2 maturation endopeptidase	protease responsible for the cleavage of a 15 amino acid peptide from the C-terminal end of the large subunit of hydrogenase 2 (HybC)	gene	gene2619	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13090
RY45_13095	RY45_13095		RY45_13095	2898978	2900681	-	hydrogenase 2 large subunit	involved in hydrogen uptake	gene	gene2620	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13095
RY45_13100	RY45_13100		RY45_13100	2900678	2901865	-	hydrogenase 2 b cytochrome subunit	HybB%3B cytochrome b subunit of the hydrogenase 2 enzyme%2C composed of HybA%2C B%2C C%2C and O subunits	gene	gene2621	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13100
RY45_13105	RY45_13105		RY45_13105	2901858	2902883	-	hydrogenase 2 protein HybA	Fe-S ferrodoxin type component%3B participates in the periplasmic electron-transferring activity of hydrogenase 2	gene	gene2622	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13105
RY45_13110	RY45_13110		RY45_13110	2902886	2904019	-	hydrogenase 2 small subunit	involved in hydrogen uptake	gene	gene2623	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13110
RY45_13115	RY45_13115		RY45_13115	2904741	2905109	+	chemotaxis protein CheY		gene	gene2624	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13115
RY45_13120	RY45_13120		RY45_13120	2905106	2905426	+	anti-anti-sigma factor family protein		gene	gene2625	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13120
RY45_13125	RY45_13125		RY45_13125	2905413	2907569	+	chemotaxis protein CheA		gene	gene2626	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13125
RY45_13130	RY45_13130		RY45_13130	2907613	2909289	+	chemotaxis protein		gene	gene2627	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13130
RY45_13135	RY45_13135		RY45_13135	2909299	2909826	+	chemotaxis protein CheW		gene	gene2628	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13135
RY45_13140	RY45_13140		RY45_13140	2909829	2910692	+	chemotaxis protein		gene	gene2629	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13140
RY45_13145	RY45_13145		RY45_13145	2910689	2911765	+	chemotaxis protein CheY		gene	gene2630	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13145
RY45_13150	RY45_13150		RY45_13150	2911768	2912976	+	diguanylate phosphodiesterase		gene	gene2631	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13150
RY45_13155	RY45_13155		RY45_13155	2913087	2914718	+	chemotaxis protein		gene	gene2632	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13155
RY45_13160	RY45_13160	alr	alr	2915197	2916306	+	alanine racemase	converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer	gene	gene2633	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13160
RY45_13165	RY45_13165		RY45_13165	2916453	2917148	-	hypothetical protein		gene	gene2634	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13165
RY45_13170	RY45_13170		RY45_13170	2917192	2917794	+	XRE family transcriptional regulator		gene	gene2635	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13170
RY45_13175	RY45_13175		RY45_13175	2918325	2918412	-	tRNA-Ser		tRNA	gene2637	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13175
RY45_13180	RY45_13180		RY45_13180	2918596	2920332	-	transporter	role in sulfate transport across the inner membrane%3B member of the SulP family of sulfate transporters%3B seems to mediate transport via sulfate/proton symport	gene	gene2638	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13180
RY45_13185	RY45_13185		RY45_13185	2920888	2920963	+	tRNA-Asn		tRNA	gene2639	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13185
RY45_13190	RY45_13190		RY45_13190	2920966	2921041	+	tRNA-Asn		tRNA	gene2640	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13190
RY45_13195	RY45_13195		RY45_13195	2921185	2921670	+	hypothetical protein		gene	gene2641	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13195
RY45_13200	RY45_13200		RY45_13200	2921788	2922237	+	hypothetical protein		gene	gene2642	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13200
RY45_13205	RY45_13205		RY45_13205	2922242	2925226	+	hypothetical protein		gene	gene2643	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13205
RY45_13210	RY45_13210		RY45_13210	2925226	2926050	+	hypothetical protein		gene	gene2644	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13210
RY45_13215	RY45_13215		RY45_13215	2926147	2927571	+	amine oxidase		gene	gene2645	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13215
RY45_13220	RY45_13220		RY45_13220	2927705	2928265	+	hypothetical protein		gene	gene2646	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13220
RY45_13225	RY45_13225		RY45_13225	2928372	2929655	+	hypothetical protein		gene	gene2647	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13225
RY45_13230	RY45_13230		RY45_13230	2929707	2930894	+	multidrug transporter		gene	gene2648	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13230
RY45_13235	RY45_13235		RY45_13235	2931012	2931479	-	hypothetical protein		gene	gene2649	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13235
RY45_13240	RY45_13240		RY45_13240	2931677	2932357	+	ABC transporter ATP-binding protein		gene	gene2650	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13240
RY45_13245	RY45_13245		RY45_13245	2932379	2934826	+	cell division protein FtsX		gene	gene2651	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13245
RY45_13250	RY45_13250		RY45_13250	2934823	2935887	+	hypothetical protein		gene	gene2652	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13250
RY45_13255	RY45_13255		RY45_13255	2936190	2936555	+	hypothetical protein		gene	gene2653	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13255
RY45_13260	RY45_13260		RY45_13260	2936634	2937581	-	hypothetical protein		gene	gene2654	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13260
RY45_13265	RY45_13265		RY45_13265	2939283	2939582	+	hypothetical protein		gene	gene2655	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13265
RY45_13270	RY45_13270		RY45_13270	2939654	2942446	-	4Fe-4S ferredoxin		gene	gene2656	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13270
RY45_13275	RY45_13275		RY45_13275	2942446	2943090	-	hypothetical protein		gene	gene2657	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13275
RY45_13280	RY45_13280		RY45_13280	2943092	2944525	-	(Fe-S)-binding protein		gene	gene2658	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13280
RY45_13285	RY45_13285		RY45_13285	2944518	2945300	-	oxidoreductase		gene	gene2659	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13285
RY45_13290	RY45_13290		RY45_13290	2945323	2947020	-	lactate permease		gene	gene2660	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13290
RY45_13295	RY45_13295		RY45_13295	2947153	2948058	+	LysR family transcriptional regulator		gene	gene2661	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13295
RY45_13300	RY45_13300		RY45_13300	2948158	2948439	+	arylsulfate sulfotransferase		gene	gene2662	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13300
RY45_13305	RY45_13305		RY45_13305	2948517	2948912	-	lactoylglutathione lyase		gene	gene2663	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13305
RY45_13310	RY45_13310		RY45_13310	2949066	2949848	-	2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase		gene	gene2664	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13310
RY45_13315	RY45_13315		RY45_13315	2949955	2950311	+	MmcQ-like protein		gene	gene2665	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13315
RY45_13320	RY45_13320		RY45_13320	2950308	2950796	+	acetyltransferase		gene	gene2666	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13320
RY45_13325	RY45_13325		RY45_13325	2950852	2951187	+	topoisomerase II		gene	gene2667	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13325
RY45_13330	RY45_13330		RY45_13330	2951193	2951375	+	hypothetical protein		gene	gene2668	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13330
RY45_13335	RY45_13335		RY45_13335	2951528	2952160	-	methionine sulfoxide reductase A		gene	gene2669	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13335
RY45_13340	RY45_13340		RY45_13340	2952420	2953748	+	N-acetylglutamate synthase	catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis	gene	gene2670	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13340
RY45_13345	RY45_13345		RY45_13345	2954170	2955522	+	aspartate kinase	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive	gene	gene2671	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13345
RY45_13350	RY45_13350		RY45_13350	2955616	2956704	-	hypothetical protein		gene	gene2672	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13350
RY45_13355	RY45_13355		RY45_13355	2956959	2959220	+	sulfatase		gene	gene2673	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13355
RY45_13360	RY45_13360		RY45_13360	2959310	2960323	-	peptidase S66		gene	gene2674	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13360
RY45_13365	RY45_13365		RY45_13365	2960589	2961431	+	phospholipase		gene	gene2675	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13365
RY45_13370	RY45_13370		RY45_13370	2961631	2962689	+	sulfite reductase subunit A		gene	gene2676	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13370
RY45_13375	RY45_13375		RY45_13375	2962691	2963530	+	sulfite reductase	with AsrAC catalyzes the reduction of sulfite to hydrogen sulfide	gene	gene2677	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13375
RY45_13380	RY45_13380		RY45_13380	2963542	2964552	+	sulfite reductase subunit C		gene	gene2678	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13380
RY45_13385	RY45_13385	cysG	cysG	2964725	2966116	+	siroheme synthase	multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin	gene	gene2679	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13385
RY45_13390	RY45_13390		RY45_13390	2966204	2966806	-	lipoprotein		gene	gene2680	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13390
RY45_13395	RY45_13395		RY45_13395	2967078	2967395	-	hypothetical protein		gene	gene2681	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13395
RY45_13400	RY45_13400		RY45_13400	2967834	2968952	+	hypothetical protein		gene	gene2682	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13400
RY45_13405	RY45_13405		RY45_13405	2968977	2970056	+	hypothetical protein		gene	gene2683	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13405
RY45_13410	RY45_13410		RY45_13410	2970102	2970902	+	hypothetical protein		gene	gene2684	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13410
RY45_13415	RY45_13415		RY45_13415	2971010	2972302	-	NADH dehydrogenase		gene	gene2685	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13415
RY45_13420	RY45_13420		RY45_13420	2972381	2972920	-	hypothetical protein		gene	gene2686	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13420
RY45_13425	RY45_13425		RY45_13425	2973390	2974784	+	purine permease		gene	gene2687	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13425
RY45_13430	RY45_13430		RY45_13430	2974858	2976666	-	peptidase M3		gene	gene2688	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13430
RY45_13435	RY45_13435		RY45_13435	2976760	2978538	-	peptidase M3		gene	gene2689	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13435
RY45_13440	RY45_13440		RY45_13440	2978720	2979637	-	membrane protein		gene	gene2690	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13440
RY45_13445	RY45_13445		RY45_13445	2979984	2980586	+	hypothetical protein		gene	gene2691	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13445
RY45_13450	RY45_13450		RY45_13450	2980651	2981556	-	preprotein translocase subunit SecF		gene	gene2692	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13450
RY45_13455	RY45_13455	secD	secD	2981678	2983531	-	preprotein translocase subunit SecD	part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane	gene	gene2693	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13455
RY45_13460	RY45_13460		RY45_13460	2983628	2984134	-	hypothetical protein		gene	gene2694	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13460
RY45_13465	RY45_13465		RY45_13465	2984201	2985058	-	hypothetical protein		gene	gene2695	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13465
RY45_13470	RY45_13470		RY45_13470	2985120	2985947	-	hypothetical protein		gene	gene2696	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13470
RY45_13475	RY45_13475		RY45_13475	2985964	2986560	-	TIGR02722 family lipoprotein		gene	gene2697	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13475
RY45_13480	RY45_13480		RY45_13480	2986560	2986958	-	hypothetical protein		gene	gene2698	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13480
RY45_13485	RY45_13485		RY45_13485	2987027	2988448	-	hypothetical protein		gene	gene2699	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13485
RY45_13490	RY45_13490		RY45_13490	2988448	2988798	-	purine nucleoside phosphoramidase		gene	gene2700	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13490
RY45_13495	RY45_13495		RY45_13495	2989049	2991061	+	chemotaxis protein		gene	gene2701	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13495
RY45_13500	RY45_13500		RY45_13500	2991140	2992024	-	6-pyruvoyl tetrahydropterin synthase		gene	gene2702	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13500
RY45_13505	RY45_13505		RY45_13505	2992104	2993447	+	dihydroorotase	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides	gene	gene2703	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13505
RY45_13510	RY45_13510		RY45_13510	2993680	2993756	+	tRNA-Pro		tRNA	gene2704	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13510
RY45_13515	RY45_13515		RY45_13515	2993921	2994364	+	hypothetical protein		gene	gene2705	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13515
RY45_13520	RY45_13520		RY45_13520	2994570	2995829	+	C4-dicarboxylate ABC transporter		gene	gene2706	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13520
RY45_13525	RY45_13525		RY45_13525	2995905	2996360	-	isoprenylcysteine carboxyl methyltransferase		gene	gene2707	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13525
RY45_13530	RY45_13530		RY45_13530	2996551	2997777	+	alanine racemase	converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer	gene	gene2708	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13530
RY45_13535	RY45_13535		RY45_13535	2997847	2998791	-	membrane protein		gene	gene2709	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13535
RY45_13540	RY45_13540		RY45_13540	2999086	3000081	-	peptide ABC transporter ATP-binding protein	with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins	gene	gene2710	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13540
RY45_13545	RY45_13545	oppD	oppD	3000082	3001062	-	oligopeptide transporter ATP-binding component		gene	gene2711	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13545
RY45_13550	RY45_13550		RY45_13550	3001203	3002114	-	peptide ABC transporter permease	with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell	gene	gene2712	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13550
RY45_13555	RY45_13555	oppB	oppB	3002129	3003049	-	oligopeptide transporter permease		gene	gene2713	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13555
RY45_13560	RY45_13560		RY45_13560	3003147	3004766	-	peptide ABC transporter substrate-binding protein	is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate	gene	gene2714	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13560
RY45_13565	RY45_13565		RY45_13565	3005046	3005681	-	hypothetical protein		gene	gene2715	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13565
RY45_13570	RY45_13570		RY45_13570	3005951	3006583	+	hypothetical protein		gene	gene2716	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13570
RY45_13575	RY45_13575		RY45_13575	3006879	3009542	+	acetaldehyde dehydrogenase		gene	gene2717	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13575
RY45_13580	RY45_13580		RY45_13580	3009652	3010887	+	phosphodiesterase		gene	gene2718	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13580
RY45_13585	RY45_13585		RY45_13585	3011241	3012911	+	histidine kinase		gene	gene2719	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13585
RY45_13590	RY45_13590		RY45_13590	3012969	3013673	+	response regulator		gene	gene2720	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13590
RY45_13595	RY45_13595		RY45_13595	3013814	3015235	+	carbon starvation protein CstA		gene	gene2721	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13595
RY45_13600	RY45_13600		RY45_13600	3015525	3015863	+	membrane protein		gene	gene2722	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13600
RY45_13605	RY45_13605		RY45_13605	3015867	3016904	+	hemolysin D		gene	gene2723	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13605
RY45_13610	RY45_13610		RY45_13610	3017019	3018779	+	carboxylate--amine ligase		gene	gene2724	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13610
RY45_13615	RY45_13615		RY45_13615	3018911	3020347	+	D-alanyl-D-alanine carboxypeptidase		gene	gene2725	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13615
RY45_13620	RY45_13620		RY45_13620	3020491	3020754	+	glutaredoxin	functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase	gene	gene2726	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13620
RY45_13625	RY45_13625		RY45_13625	3020812	3021024	-	hypothetical protein		gene	gene2727	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13625
RY45_13630	RY45_13630		RY45_13630	3021404	3022618	+	aminotransferase	broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor	gene	gene2728	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13630
RY45_13635	RY45_13635		RY45_13635	3022684	3024159	-	C4-dicarboxylate ABC transporter		gene	gene2729	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13635
RY45_13640	RY45_13640		RY45_13640	3024323	3025516	-	trans-2-enoyl-CoA reductase	enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity	gene	gene2730	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13640
RY45_13645	RY45_13645		RY45_13645	3025843	3027141	+	chemotaxis protein		gene	gene2731	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13645
RY45_13650	RY45_13650		RY45_13650	3027203	3027400	-	hypothetical protein		gene	gene2732	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13650
RY45_13655	RY45_13655		RY45_13655	3027451	3028347	-	membrane protein		gene	gene2733	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13655
RY45_13660	RY45_13660		RY45_13660	3028460	3029041	+	electron transporter RsxA		gene	gene2734	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13660
RY45_13665	RY45_13665		RY45_13665	3029046	3029609	+	electron transporter RnfB	part of membrane-bound complex thought to be involved in electron transport to nitrogen	gene	gene2735	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13665
RY45_13670	RY45_13670		RY45_13670	3029616	3032174	+	electron transporter RnfC		gene	gene2736	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13670
RY45_13675	RY45_13675		RY45_13675	3032178	3033230	+	electron transporter RnfD		gene	gene2737	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13675
RY45_13680	RY45_13680		RY45_13680	3033265	3033897	+	electron transporter RnfG	part of membrane-bound complex hought to be involved in electron transport to nitrogen	gene	gene2738	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13680
RY45_13685	RY45_13685		RY45_13685	3033914	3034672	+	elongation factor G		gene	gene2739	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13685
RY45_13690	RY45_13690		RY45_13690	3034687	3035328	+	endonuclease III	DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines	gene	gene2740	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13690
RY45_13695	RY45_13695		RY45_13695	3035460	3035873	+	glyoxalase I	Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione	gene	gene2741	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13695
RY45_13700	RY45_13700		RY45_13700	3035938	3036813	-	flagellar protein MotY		gene	gene2742	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13700
RY45_13705	RY45_13705		RY45_13705	3036882	3038855	-	chemotaxis protein		gene	gene2743	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13705
RY45_13710	RY45_13710		RY45_13710	3039004	3039663	+	ribonuclease T		gene	gene2744	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13710
RY45_13715	RY45_13715		RY45_13715	3039923	3041245	+	sodium:proton antiporter		gene	gene2745	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13715
RY45_13720	RY45_13720		RY45_13720	3041613	3043508	-	RNA helicase		gene	gene2746	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13720
RY45_13725	RY45_13725		RY45_13725	3043689	3044150	-	esterase		gene	gene2747	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13725
RY45_13730	RY45_13730		RY45_13730	3044277	3044765	-	hypothetical protein		gene	gene2748	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13730
RY45_13735	RY45_13735		RY45_13735	3044765	3047824	-	membrane protein		gene	gene2749	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13735
RY45_13740	RY45_13740		RY45_13740	3047994	3048920	+	cation diffusion facilitator family transporter		gene	gene2750	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13740
RY45_13745	RY45_13745		RY45_13745	3049234	3050769	+	membrane protein		gene	gene2751	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13745
RY45_13750	RY45_13750		RY45_13750	3050960	3052081	+	N-ethylmaleimide reductase		gene	gene2752	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13750
RY45_13755	RY45_13755		RY45_13755	3052170	3053189	-	adenine deaminase		gene	gene2753	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13755
RY45_13760	RY45_13760		RY45_13760	3053404	3054153	+	UMP phosphatase		gene	gene2754	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13760
RY45_13765	RY45_13765		RY45_13765	3054223	3055797	+	potassium transporter Kef		gene	gene2755	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13765
RY45_13770	RY45_13770		RY45_13770	3055923	3056291	+	transcriptional regulator		gene	gene2756	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13770
RY45_13775	RY45_13775	asnB	asnB	3056485	3058149	+	asparagine synthetase B	functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP	gene	gene2757	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13775
RY45_13780	RY45_13780		RY45_13780	3058329	3058829	+	thiol-disulfide isomerase/thioredoxin domain-containing protein		gene	gene2758	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13780
RY45_13785	RY45_13785		RY45_13785	3058953	3059576	+	glutathione S-transferase		gene	gene2759	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13785
RY45_13790	RY45_13790		RY45_13790	3059655	3060293	-	maleylacetoacetate isomerase		gene	gene2760	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13790
RY45_13795	RY45_13795		RY45_13795	3060366	3061364	-	2-keto-4-pentenoate hydratase		gene	gene2761	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13795
RY45_13800	RY45_13800		RY45_13800	3061376	3062536	-	dioxygenase		gene	gene2762	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13800
RY45_13805	RY45_13805		RY45_13805	3062584	3063681	-	4-hydroxyphenylpyruvate dioxygenase		gene	gene2763	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13805
RY45_13810	RY45_13810		RY45_13810	3063919	3064587	-	hypothetical protein		gene	gene2764	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13810
RY45_13815	RY45_13815		RY45_13815	3064584	3065243	-	RNA pseudouridine synthase		gene	gene2765	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13815
RY45_13820	RY45_13820		RY45_13820	3065330	3066913	+	diguanylate cyclase		gene	gene2766	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13820
RY45_13825	RY45_13825		RY45_13825	3066980	3068533	-	aerotaxis receptor Aer		gene	gene2767	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13825
RY45_13830	RY45_13830		RY45_13830	3068691	3069377	-	virulence factor		gene	gene2768	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13830
RY45_13835	RY45_13835		RY45_13835	3069387	3071936	-	hypothetical protein		gene	gene2769	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13835
RY45_13840	RY45_13840		RY45_13840	3072413	3074038	-	hydrolase		gene	gene2770	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13840
RY45_13845	RY45_13845		RY45_13845	3074419	3075198	+	membrane protein		gene	gene2771	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13845
RY45_13850	RY45_13850		RY45_13850	3075284	3076498	+	MFS transporter		gene	gene2772	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13850
RY45_13855	RY45_13855		RY45_13855	3076717	3077352	-	type III secretion system protein		gene	gene2773	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13855
RY45_13860	RY45_13860		RY45_13860	3077514	3077723	+	hypothetical protein		gene	gene2774	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13860
RY45_13865	RY45_13865		RY45_13865	3077957	3078682	-	preproteins translocase J		gene	gene2775	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13865
RY45_13870	RY45_13870		RY45_13870	3078701	3079039	-	preprotein translocase I		gene	gene2776	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13870
RY45_13875	RY45_13875		RY45_13875	3079039	3079593	-	RNA-binding protein		gene	gene2777	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13875
RY45_13880	RY45_13880		RY45_13880	3079590	3079943	-	preprotein translocase G		gene	gene2778	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13880
RY45_13885	RY45_13885		RY45_13885	3079943	3080200	-	type III export protein pscF		gene	gene2779	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13885
RY45_13890	RY45_13890		RY45_13890	3080193	3080405	-	AscE protein		gene	gene2780	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13890
RY45_13895	RY45_13895		RY45_13895	3080368	3081669	-	AscD protein		gene	gene2781	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13895
RY45_13900	RY45_13900		RY45_13900	3081666	3083495	-	secretin		gene	gene2782	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13900
RY45_13905	RY45_13905		RY45_13905	3083483	3083908	-	type III secretion protein		gene	gene2783	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13905
RY45_13910	RY45_13910		RY45_13910	3083924	3084739	-	ExsD protein		gene	gene2784	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13910
RY45_13915	RY45_13915		RY45_13915	3084858	3085673	-	AraC family transcriptional regulator		gene	gene2785	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13915
RY45_13920	RY45_13920		RY45_13920	3086012	3086413	-	ExsB family transcriptional regulator		gene	gene2786	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13920
RY45_13925	RY45_13925		RY45_13925	3086410	3086643	-	ExsE protein		gene	gene2787	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13925
RY45_13930	RY45_13930		RY45_13930	3086646	3087089	-	glycosyl transferase		gene	gene2788	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13930
RY45_13935	RY45_13935		RY45_13935	3087225	3087959	-	AopD protein		gene	gene2789	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13935
RY45_13940	RY45_13940		RY45_13940	3088137	3089180	-	hypothetical protein		gene	gene2790	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13940
RY45_13945	RY45_13945		RY45_13945	3089161	3089658	-	Low calcium response locus protein H		gene	gene2791	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13945
RY45_13950	RY45_13950		RY45_13950	3089674	3090792	-	hypothetical protein		gene	gene2792	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13950
RY45_13955	RY45_13955		RY45_13955	3090802	3091089	-	hypothetical protein		gene	gene2793	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13955
RY45_13960	RY45_13960		RY45_13960	3091129	3091569	-	Low calcium response locus protein R		gene	gene2794	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13960
RY45_13965	RY45_13965		RY45_13965	3091566	3093680	-	Low calcium response locus protein D		gene	gene2795	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13965
RY45_13970	RY45_13970		RY45_13970	3093661	3094005	-	type III secretion protein		gene	gene2796	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13970
RY45_13975	RY45_13975		RY45_13975	3094008	3094373	-	type III secretion protein		gene	gene2797	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13975
RY45_13980	RY45_13980		RY45_13980	3094453	3094824	-	molecular chaperone		gene	gene2798	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13980
RY45_13985	RY45_13985		RY45_13985	3094821	3095102	-	protein tyeA		gene	gene2799	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13985
RY45_13990	RY45_13990		RY45_13990	3095083	3095961	-	type III secretion protein		gene	gene2800	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13990
RY45_13995	RY45_13995	fliI	fliI	3096152	3097474	+	ATP synthase	involved in type III protein export during flagellum assembly	gene	gene2801	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_13995
RY45_14000	RY45_14000		RY45_14000	3097471	3097932	+	type III secretion protein		gene	gene2802	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14000
RY45_14005	RY45_14005		RY45_14005	3097939	3099054	+	hypothetical protein		gene	gene2803	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14005
RY45_14010	RY45_14010		RY45_14010	3099051	3099974	+	type III secretion system protein		gene	gene2804	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14010
RY45_14015	RY45_14015	ssaR	ssaR	3099971	3100624	+	type III secretion system protein SsaR	part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response	gene	gene2805	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14015
RY45_14020	RY45_14020		RY45_14020	3100626	3100892	+	preprotein translocase S		gene	gene2806	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14020
RY45_14025	RY45_14025		RY45_14025	3100889	3101677	+	preprotein translocase T		gene	gene2807	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14025
RY45_14030	RY45_14030		RY45_14030	3101674	3102732	+	preprotein translocase U		gene	gene2808	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14030
RY45_14035	RY45_14035		RY45_14035	3103048	3103434	+	hypothetical protein		gene	gene2809	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14035
RY45_14040	RY45_14040		RY45_14040	3103498	3103585	-	tRNA-Ser		tRNA	gene2810	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14040
RY45_14045	RY45_14045		RY45_14045	3103769	3104425	+	membrane protein	binds to the HflBKC complex which modulates FtsH activity	gene	gene2811	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14045
RY45_14050	RY45_14050		RY45_14050	3104589	3106742	+	YccS/YhfK family integral membrane protein		gene	gene2812	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14050
RY45_14055	RY45_14055		RY45_14055	3106763	3107107	+	sulfur transfer protein TusE	transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs	gene	gene2813	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14055
RY45_14060	RY45_14060		RY45_14060	3107165	3107965	-	DedD protein		gene	gene2814	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14060
RY45_14065	RY45_14065		RY45_14065	3108040	3109299	-	folylpolyglutamate synthase		gene	gene2815	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14065
RY45_14070	RY45_14070		RY45_14070	3109302	3110165	-	acetyl-CoA carboxylase subunit beta	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits	gene	gene2816	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14070
RY45_14075	RY45_14075	truA	truA	3110285	3111094	-	tRNA pseudouridine synthase A	mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability	gene	gene2817	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14075
RY45_14080	RY45_14080		RY45_14080	3111274	3113472	-	pilus assembly protein FimV		gene	gene2818	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14080
RY45_14085	RY45_14085		RY45_14085	3113748	3114764	-	aspartate-semialdehyde dehydrogenase		gene	gene2819	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14085
RY45_14090	RY45_14090		RY45_14090	3114907	3116037	-	erythronate-4-phosphate dehydrogenase	catalyzes the formation of 3-hydroxy-2-oxo-4-phosphonooxybutanoate from erythronate-4-phosphate	gene	gene2820	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14090
RY45_14095	RY45_14095		RY45_14095	3116384	3117106	+	phosphatidylglycerophosphatase		gene	gene2821	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14095
RY45_14100	RY45_14100		RY45_14100	3117186	3118016	-	membrane protein		gene	gene2822	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14100
RY45_14105	RY45_14105		RY45_14105	3118461	3118823	+	lactoylglutathione lyase		gene	gene2823	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14105
RY45_14110	RY45_14110		RY45_14110	3118899	3119489	+	hypothetical protein		gene	gene2824	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14110
RY45_14115	RY45_14115		RY45_14115	3119961	3120335	+	hypothetical protein		gene	gene2825	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14115
RY45_14120	RY45_14120		RY45_14120	3120351	3120890	+	isochorismatase		gene	gene2826	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14120
RY45_14125	RY45_14125		RY45_14125	3121376	3123250	+	peptidase S8		gene	gene2827	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14125
RY45_14130	RY45_14130		RY45_14130	3123268	3123726	+	hypothetical protein		gene	gene2828	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14130
RY45_14135	RY45_14135		RY45_14135	3124148	3126529	+	glycosyl hydrolase family 3		gene	gene2829	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14135
RY45_14140	RY45_14140		RY45_14140	3126625	3127602	-	AraC family transcriptional regulator		gene	gene2830	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14140
RY45_14145	RY45_14145		RY45_14145	3127903	3130281	-	phosphoenolpyruvate synthase	catalyzes the formation of phosphoenolpyruvate from pyruvate	gene	gene2831	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14145
RY45_14150	RY45_14150		RY45_14150	3130590	3131402	+	phosphoenolpyruvate synthase regulatory protein		gene	gene2832	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14150
RY45_14155	RY45_14155		RY45_14155	3131495	3131782	-	hypothetical protein		gene	gene2833	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14155
RY45_14160	RY45_14160		RY45_14160	3132145	3133521	+	aromatic amino acid transporter		gene	gene2834	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14160
RY45_14165	RY45_14165		RY45_14165	3133789	3134493	-	hypothetical protein		gene	gene2835	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14165
RY45_14170	RY45_14170		RY45_14170	3134550	3135107	-	hypothetical protein		gene	gene2836	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14170
RY45_14175	RY45_14175	structural toxin protein RtxA	structural toxin protein RtxA	3138809	3139840	-		disrupted	pseudogene	gene2837	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14175
RY45_14180	RY45_14180	hypothetical protein	hypothetical protein	3140021	3141376	-		disrupted	pseudogene	gene2838	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14180
RY45_14185	RY45_14185		RY45_14185	3141643	3143568	-	diguanylate phosphodiesterase		gene	gene2839	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14185
RY45_14190	RY45_14190		RY45_14190	3143572	3144333	-	sulfate adenylyltransferase		gene	gene2840	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14190
RY45_14195	RY45_14195		RY45_14195	3144453	3145781	-	channel protein TolC		gene	gene2841	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14195
RY45_14200	RY45_14200		RY45_14200	3145817	3147235	-	hemolysin secretion protein D		gene	gene2842	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14200
RY45_14205	RY45_14205		RY45_14205	3147228	3149372	-	ABC transporter		gene	gene2843	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14205
RY45_14210	RY45_14210		RY45_14210	3149775	3150710	-	hypothetical protein		gene	gene2844	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14210
RY45_14215	RY45_14215		RY45_14215	3150959	3151159	+	hypothetical protein		gene	gene2845	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14215
RY45_14220	RY45_14220	gltB	gltB	3151324	3155781	+	glutamate synthase	catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate	gene	gene2846	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14220
RY45_14225	RY45_14225		RY45_14225	3155794	3157209	+	glutamate synthase		gene	gene2847	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14225
RY45_14230	RY45_14230		RY45_14230	3157290	3158051	-	ATP-binding protein		gene	gene2848	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14230
RY45_14235	RY45_14235		RY45_14235	3158048	3158725	-	cysteine ABC transporter permease		gene	gene2849	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14235
RY45_14240	RY45_14240		RY45_14240	3158762	3159535	-	amino acid ABC transporter substrate-binding protein		gene	gene2850	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14240
RY45_14245	RY45_14245		RY45_14245	3159803	3160213	-	polyketide cyclase		gene	gene2851	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14245
RY45_14250	RY45_14250		RY45_14250	3160223	3160801	-	methyltransferase		gene	gene2852	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14250
RY45_14255	RY45_14255		RY45_14255	3160870	3161337	-	MerR family transcriptional regulator		gene	gene2853	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14255
RY45_14260	RY45_14260		RY45_14260	3161404	3162399	+	hypothetical protein		gene	gene2854	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14260
RY45_14265	RY45_14265		RY45_14265	3162422	3162856	-	protease		gene	gene2855	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14265
RY45_14270	RY45_14270		RY45_14270	3162921	3163964	-	peptidase M35		gene	gene2856	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14270
RY45_14275	RY45_14275		RY45_14275	3164233	3164871	-	hypothetical protein		gene	gene2857	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14275
RY45_14280	RY45_14280		RY45_14280	3164971	3166266	-	RNA helicase		gene	gene2858	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14280
RY45_14285	RY45_14285		RY45_14285	3166518	3167051	-	spermidine acetyltransferase		gene	gene2859	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14285
RY45_14290	RY45_14290		RY45_14290	3167151	3167801	-	membrane protein		gene	gene2860	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14290
RY45_14295	RY45_14295		RY45_14295	3168032	3169615	-	molecular chaperone TorD		gene	gene2861	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14295
RY45_14300	RY45_14300		RY45_14300	3169837	3170793	+	hypothetical protein		gene	gene2862	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14300
RY45_14305	RY45_14305		RY45_14305	3171018	3171884	+	nuclease		gene	gene2863	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14305
RY45_14310	RY45_14310		RY45_14310	3172022	3172585	+	hypothetical protein		gene	gene2864	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14310
RY45_14315	RY45_14315		RY45_14315	3172642	3173895	-	hypothetical protein		gene	gene2865	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14315
RY45_14320	RY45_14320		RY45_14320	3173986	3175644	-	2-isopropylmalate synthase		gene	gene2866	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14320
RY45_14325	RY45_14325	carB	carB	3176131	3179367	-	carbamoyl phosphate synthase large subunit	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity	gene	gene2867	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14325
RY45_14330	RY45_14330		RY45_14330	3179384	3180520	-	carbamoyl phosphate synthase small subunit	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers	gene	gene2868	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14330
RY45_14335	RY45_14335		RY45_14335	3181209	3182021	-	dihydrodipicolinate reductase	catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis	gene	gene2869	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14335
RY45_14340	RY45_14340		RY45_14340	3182332	3183666	+	sodium:proton antiporter		gene	gene2870	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14340
RY45_14345	RY45_14345		RY45_14345	3183823	3184425	+	5-formyltetrahydrofolate cyclo-ligase		gene	gene2871	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14345
RY45_14350	RY45_14350		RY45_14350	3184611	3185264	+	ribose 5-phosphate isomerase	catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway	gene	gene2872	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14350
RY45_14355	RY45_14355		RY45_14355	3185267	3185386	+	ribose 5-phosphate isomerase		gene	gene2873	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14355
RY45_14360	RY45_14360		RY45_14360	3185605	3186837	+	D-3-phosphoglycerate dehydrogenase	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate	gene	gene2874	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14360
RY45_14365	RY45_14365		RY45_14365	3187031	3187411	-	diacylglycerol kinase		gene	gene2875	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14365
RY45_14370	RY45_14370		RY45_14370	3187567	3188631	+	phospho-2-dehydro-3-deoxyheptonate aldolase		gene	gene2876	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14370
RY45_14375	RY45_14375		RY45_14375	3188638	3189096	+	aminoglycoside 6'-acetyltransferase		gene	gene2877	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14375
RY45_14380	RY45_14380		RY45_14380	3189118	3189867	-	cobalamin ABC transporter ATP-binding protein		gene	gene2878	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14380
RY45_14385	RY45_14385		RY45_14385	3189890	3190897	-	Vitamin B12 import system permease BtuC		gene	gene2879	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14385
RY45_14390	RY45_14390		RY45_14390	3190998	3191729	-	ABC transporter substrate-binding protein		gene	gene2880	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14390
RY45_14395	RY45_14395		RY45_14395	3191843	3192199	+	membrane protein		gene	gene2881	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14395
RY45_14400	RY45_14400		RY45_14400	3192260	3193399	+	twitching motility protein PilT		gene	gene2882	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14400
RY45_14405	RY45_14405	glgC	glgC	3193682	3194953	+	glucose-1-phosphate adenylyltransferase	catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate	gene	gene2883	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14405
RY45_14410	RY45_14410		RY45_14410	3195089	3195568	+	protein WbuC		gene	gene2884	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14410
RY45_14415	RY45_14415		RY45_14415	3195660	3195902	-	LuxR family transcriptional regulator		gene	gene2885	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14415
RY45_14420	RY45_14420		RY45_14420	3195899	3198172	-	iron transporter FeoB		gene	gene2886	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14420
RY45_14425	RY45_14425		RY45_14425	3198228	3198455	-	iron transporter FeoA		gene	gene2887	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14425
RY45_14430	RY45_14430		RY45_14430	3198575	3198904	+	translation initiation factor SUI1		gene	gene2888	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14430
RY45_14435	RY45_14435		RY45_14435	3199161	3199718	+	membrane protein		gene	gene2889	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14435
RY45_14440	RY45_14440		RY45_14440	3199921	3200859	+	hypothetical protein		gene	gene2890	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14440
RY45_14445	RY45_14445		RY45_14445	3200852	3201859	+	hypothetical protein		gene	gene2891	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14445
RY45_14450	RY45_14450		RY45_14450	3201856	3202353	+	membrane protein		gene	gene2892	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14450
RY45_14455	RY45_14455		RY45_14455	3202427	3203173	+	periplasmic protein		gene	gene2893	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14455
RY45_14460	RY45_14460		RY45_14460	3203275	3204021	+	periplasmic protein		gene	gene2894	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14460
RY45_14465	RY45_14465		RY45_14465	3204079	3205092	-	diguanylate cyclase		gene	gene2895	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14465
RY45_14470	RY45_14470		RY45_14470	3205777	3206085	-	hypothetical protein		gene	gene2896	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14470
RY45_14475	RY45_14475		RY45_14475	3206985	3209978	+	DNA polymerase		gene	gene2897	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14475
RY45_14480	RY45_14480	cysS	cysS	3211242	3212618	-	cysteine--tRNA ligase	catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA	gene	gene2898	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14480
RY45_14485	RY45_14485		RY45_14485	3212809	3213306	+	peptidylprolyl isomerase		gene	gene2899	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14485
RY45_14490	RY45_14490		RY45_14490	3213296	3214021	+	diadenosine tetraphosphate hydrolase		gene	gene2900	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14490
RY45_14495	RY45_14495		RY45_14495	3214018	3214743	+	UDP-2%2C3-diacylglucosamine hydrolase	catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine	gene	gene2901	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14495
RY45_14500	RY45_14500		RY45_14500	3214819	3215772	-	nitrite reductase	membrane protein%2C may be involved in the transfer of electrons from quinones to c-type cytochromes	gene	gene2902	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14500
RY45_14505	RY45_14505		RY45_14505	3215821	3216489	-	nitrite reductase	4Fe4S subunit%3B may be involved in the transfer of electrons from quinones to the c-type cytochromes	gene	gene2903	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14505
RY45_14510	RY45_14510		RY45_14510	3216486	3217115	-	nitrite reductase		gene	gene2904	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14510
RY45_14515	RY45_14515		RY45_14515	3217265	3217876	-	cytochrome C biogenesis protein CcmH		gene	gene2905	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14515
RY45_14520	RY45_14520		RY45_14520	3218124	3220238	+	cytochrome C		gene	gene2906	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14520
RY45_14525	RY45_14525		RY45_14525	3220295	3221266	+	cystathionine beta-synthase		gene	gene2907	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14525
RY45_14530	RY45_14530		RY45_14530	3221278	3223269	+	membrane protein		gene	gene2908	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14530
RY45_14535	RY45_14535		RY45_14535	3223425	3225407	-	chemotaxis protein		gene	gene2909	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14535
RY45_14540	RY45_14540		RY45_14540	3226055	3227344	+	chemotaxis protein		gene	gene2910	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14540
RY45_14545	RY45_14545		RY45_14545	3227572	3227658	-	tRNA-Leu		tRNA	gene2911	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14545
RY45_14550	RY45_14550		RY45_14550	3227700	3227773	-	tRNA-Cys		tRNA	gene2912	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14550
RY45_14555	RY45_14555		RY45_14555	3227808	3227883	-	tRNA-Gly		tRNA	gene2913	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14555
RY45_14560	RY45_14560		RY45_14560	3228065	3228619	-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase		gene	gene2914	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14560
RY45_14565	RY45_14565	uvrC	uvrC	3228924	3230774	-	excinuclease ABC subunit C	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision	gene	gene2915	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14565
RY45_14570	RY45_14570	sirA	sirA	3230963	3231607	-	response regulator	in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system	gene	gene2916	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14570
RY45_14575	RY45_14575		RY45_14575	3231820	3232581	-	3-deoxy-manno-octulosonate cytidylyltransferase	CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS	gene	gene2917	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14575
RY45_14580	RY45_14580		RY45_14580	3232578	3232766	-	hypothetical protein		gene	gene2918	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14580
RY45_14585	RY45_14585	lpxK	lpxK	3232888	3233889	-	tetraacyldisaccharide 4'-kinase	transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate	gene	gene2919	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14585
RY45_14590	RY45_14590		RY45_14590	3233889	3235658	-	lipid transporter ATP-binding/permease	involved in the transport of lipid A across the inner membrane	gene	gene2920	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14590
RY45_14595	RY45_14595		RY45_14595	3235781	3238000	-	competence protein ComEC		gene	gene2921	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14595
RY45_14600	RY45_14600		RY45_14600	3238010	3238528	+	flagellar biosynthesis protein FlhF		gene	gene2922	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14600
RY45_14605	RY45_14605		RY45_14605	3238522	3239016	+	hypothetical protein		gene	gene2923	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14605
RY45_14610	RY45_14610		RY45_14610	3239138	3240646	+	ATP-binding protein		gene	gene2924	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14610
RY45_14615	RY45_14615		RY45_14615	3240719	3241009	-	lipoprotein bor		gene	gene2925	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14615
RY45_14620	RY45_14620		RY45_14620	3241183	3241476	-	lipoprotein bor		gene	gene2926	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14620
RY45_14625	RY45_14625		RY45_14625	3241510	3242244	-	hypothetical protein		gene	gene2927	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14625
RY45_14630	RY45_14630		RY45_14630	3242321	3243346	-	StbA family protein		gene	gene2928	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14630
RY45_14635	RY45_14635		RY45_14635	3243467	3244243	-	alpha/beta hydrolase		gene	gene2929	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14635
RY45_14640	RY45_14640		RY45_14640	3244308	3245384	-	molybdenum ABC transporter ATP-binding protein		gene	gene2930	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14640
RY45_14645	RY45_14645		RY45_14645	3245381	3246061	-	molybdenum ABC transporter permease		gene	gene2931	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14645
RY45_14650	RY45_14650		RY45_14650	3246285	3247013	-	molybdate ABC transporter substrate-binding protein		gene	gene2932	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14650
RY45_14655	RY45_14655		RY45_14655	3247117	3247590	-	molybdenum cofactor biosynthesis protein MoaE		gene	gene2933	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14655
RY45_14660	RY45_14660		RY45_14660	3247593	3247838	-	molybdopterin synthase small subunit		gene	gene2934	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14660
RY45_14665	RY45_14665	moaC	moaC	3247835	3248359	-	molybdenum cofactor biosynthesis protein MoaC	MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis	gene	gene2935	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14665
RY45_14670	RY45_14670		RY45_14670	3248369	3248875	-	molybdopterin biosynthesis protein B		gene	gene2936	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14670
RY45_14675	RY45_14675		RY45_14675	3249138	3249728	-	cytochrome C	with NapABDFGH functions as a nitrate reductase%3B NapC functions as an electron shuttle between NapAB and NapGH or quinone	gene	gene2937	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14675
RY45_14680	RY45_14680		RY45_14680	3249740	3250195	-	nitrate reductase		gene	gene2938	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14680
RY45_14685	RY45_14685	napH	napH	3250195	3251070	-	quinol dehydrogenase	part of NapHG quinol dehydrogenase%3B couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA	gene	gene2939	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14685
RY45_14690	RY45_14690		RY45_14690	3251067	3251801	-	quinol dehydrogenase		gene	gene2940	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14690
RY45_14695	RY45_14695		RY45_14695	3251818	3254307	-	nitrate reductase	periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC	gene	gene2941	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14695
RY45_14700	RY45_14700		RY45_14700	3254456	3254719	-	sorbose reductase		gene	gene2942	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14700
RY45_14705	RY45_14705		RY45_14705	3254749	3255258	-	ferredoxin	Predicted role in electron transfer to the periplasmic nitrate reductase protein NapA.	gene	gene2943	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14705
RY45_14710	RY45_14710	moaA	moaA	3255508	3256503	-	molybdenum cofactor biosynthesis protein A	together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z	gene	gene2944	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14710
RY45_14715	RY45_14715		RY45_14715	3256710	3258422	+	histidine kinase		gene	gene2945	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14715
RY45_14720	RY45_14720		RY45_14720	3258422	3259060	+	nitrate/nitrite response regulator		gene	gene2946	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14720
RY45_14725	RY45_14725		RY45_14725	3259165	3259740	+	ATP-dependent protease		gene	gene2947	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14725
RY45_14730	RY45_14730		RY45_14730	3259968	3262064	-	chemotaxis protein CheY		gene	gene2948	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14730
RY45_14735	RY45_14735		RY45_14735	3262083	3263267	-	hypothetical protein		gene	gene2949	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14735
RY45_14740	RY45_14740		RY45_14740	3263381	3264292	+	hypothetical protein		gene	gene2950	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14740
RY45_14745	RY45_14745		RY45_14745	3264343	3264678	-	histidine kinase		gene	gene2951	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14745
RY45_14750	RY45_14750		RY45_14750	3265000	3265779	-	glutamine amidotransferase		gene	gene2952	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14750
RY45_14755	RY45_14755	gmhA	gmhA	3265919	3266497	-	phosphoheptose isomerase	catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate	gene	gene2953	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14755
RY45_14760	RY45_14760	fadE	fadE	3266742	3269198	+	acyl-CoA dehydrogenase	functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA	gene	gene2954	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14760
RY45_14765	RY45_14765		RY45_14765	3269365	3270882	+	phosphodiesterase		gene	gene2955	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14765
RY45_14770	RY45_14770		RY45_14770	3271142	3272485	-	magnesium transporter		gene	gene2956	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14770
RY45_14775	RY45_14775		RY45_14775	3272990	3274198	-	flagellar hook protein FlgL		gene	gene2957	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14775
RY45_14780	RY45_14780		RY45_14780	3274203	3276203	-	flagellar hook protein FlgK		gene	gene2958	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14780
RY45_14785	RY45_14785		RY45_14785	3276207	3277298	-	glucosaminidase		gene	gene2959	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14785
RY45_14790	RY45_14790		RY45_14790	3277343	3278440	-	flagellar P-ring protein FlgI		gene	gene2960	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14790
RY45_14795	RY45_14795		RY45_14795	3278449	3279120	-	flagellar L-ring protein FlgH		gene	gene2961	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14795
RY45_14800	RY45_14800	flgG	flgG	3279135	3279923	-	flagellar basal body rod protein FlgG	makes up the distal portion of the flagellar basal body rod	gene	gene2962	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14800
RY45_14805	RY45_14805		RY45_14805	3279938	3280684	-	flagellar basal body rod protein FlgF		gene	gene2963	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14805
RY45_14810	RY45_14810		RY45_14810	3280820	3282202	-	flagellar hook protein FlgE		gene	gene2964	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14810
RY45_14815	RY45_14815		RY45_14815	3282213	3282983	-	flagellar basal body rod modification protein FlgD		gene	gene2965	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14815
RY45_14820	RY45_14820		RY45_14820	3282999	3283418	-	flagellar basal body rod protein FlgC		gene	gene2966	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14820
RY45_14825	RY45_14825	flgB	flgB	3283418	3283816	-	flagellar basal body rod protein FlgB	with FlgF and C makes up the proximal portion of the flagellar basal body rod	gene	gene2967	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14825
RY45_14830	RY45_14830		RY45_14830	3283880	3284704	-	chemotaxis protein CheR		gene	gene2968	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14830
RY45_14835	RY45_14835		RY45_14835	3284723	3285634	-	chemotaxis protein CheW		gene	gene2969	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14835
RY45_14840	RY45_14840		RY45_14840	3285857	3286462	+	flagellar basal body P-ring biosynthesis protein FlgA		gene	gene2970	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14840
RY45_14845	RY45_14845		RY45_14845	3286553	3286873	+	anti-sigma D factor		gene	gene2971	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14845
RY45_14850	RY45_14850		RY45_14850	3286873	3287286	+	flagellar biosynthesis protein FlgN		gene	gene2972	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14850
RY45_14855	RY45_14855		RY45_14855	3287344	3287886	-	phosphodiesterase		gene	gene2973	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14855
RY45_14860	RY45_14860		RY45_14860	3287897	3289534	-	peptide ABC transporter substrate-binding protein		gene	gene2974	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14860
RY45_14865	RY45_14865		RY45_14865	3289760	3290665	+	membrane protein		gene	gene2975	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14865
RY45_14870	RY45_14870		RY45_14870	3290677	3291369	-	16S rRNA pseudouridylate synthase	catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA	gene	gene2976	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14870
RY45_14875	RY45_14875		RY45_14875	3291544	3292740	+	phosphodiesterase		gene	gene2977	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14875
RY45_14880	RY45_14880		RY45_14880	3292737	3292925	-	hypothetical protein		gene	gene2978	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14880
RY45_14885	RY45_14885		RY45_14885	3293025	3293675	-	fructose-6-phosphate aldolase	similar to transaldolase from Escherichia coli%3B many organisms have multiple copies	gene	gene2979	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14885
RY45_14890	RY45_14890		RY45_14890	3293804	3294700	+	pyruvate formate lyase-activating protein		gene	gene2980	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14890
RY45_14895	RY45_14895		RY45_14895	3294775	3297207	+	formate acetyltransferase		gene	gene2981	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14895
RY45_14900	RY45_14900		RY45_14900	3297300	3298046	+	DeoR faimly transcriptional regulator		gene	gene2982	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14900
RY45_14905	RY45_14905		RY45_14905	3298174	3299064	+	membrane protein		gene	gene2983	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14905
RY45_14910	RY45_14910		RY45_14910	3299186	3301036	+	peptide ABC transporter substrate-binding protein		gene	gene2984	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14910
RY45_14915	RY45_14915		RY45_14915	3301151	3301543	-	hypothetical protein		gene	gene2985	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14915
RY45_14920	RY45_14920		RY45_14920	3301637	3302194	-	hypothetical protein		gene	gene2986	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14920
RY45_14925	RY45_14925		RY45_14925	3302445	3302693	+	hypothetical protein		gene	gene2987	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14925
RY45_14930	RY45_14930		RY45_14930	3302680	3302985	-	hypothetical protein		gene	gene2988	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14930
RY45_14935	RY45_14935		RY45_14935	3303107	3303316	-	cold-shock protein		gene	gene2989	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14935
RY45_14940	RY45_14940		RY45_14940	3303521	3304621	-	branched-chain alpha-keto acid dehydrogenase subunit E2		gene	gene2990	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14940
RY45_14945	RY45_14945		RY45_14945	3304618	3305604	-	2-oxoisovalerate dehydrogenase		gene	gene2991	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14945
RY45_14950	RY45_14950		RY45_14950	3305601	3306692	-	ABC transporter permease		gene	gene2992	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14950
RY45_14955	RY45_14955		RY45_14955	3306974	3307999	-	succinylglutamate desuccinylase		gene	gene2993	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14955
RY45_14960	RY45_14960		RY45_14960	3308273	3308482	-	hypothetical protein		gene	gene2994	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14960
RY45_14965	RY45_14965		RY45_14965	3309004	3309897	+	DNA replication protein		gene	gene2995	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14965
RY45_14970	RY45_14970		RY45_14970	3310032	3313874	-	helicase		gene	gene2996	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14970
RY45_14975	RY45_14975		RY45_14975	3314090	3314743	-	hypothetical protein		gene	gene2997	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14975
RY45_14980	RY45_14980		RY45_14980	3314895	3316601	-	ligase		gene	gene2998	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14980
RY45_14985	RY45_14985		RY45_14985	3316708	3317769	-	hypothetical protein		gene	gene2999	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14985
RY45_14990	RY45_14990		RY45_14990	3317842	3318381	-	dTDP-4-dehydrorhamnose 3%2C5-epimerase		gene	gene3000	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14990
RY45_14995	RY45_14995		RY45_14995	3318486	3319373	-	glucose-1-phosphate thymidylyltransferase		gene	gene3001	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_14995
RY45_15000	RY45_15000		RY45_15000	3319485	3320372	-	dTDP-4-dehydrorhamnose reductase	with dTDP-4-dehydrorhamnose 3%2C5-epimerase forms a complex known as dTDP-L-rhamnose synthetase%3B catalyzes the reduction of dTDP-4-dehydro-6-deoxy-L-mannose to dTDP-L-rhamnose	gene	gene3002	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15000
RY45_15005	RY45_15005		RY45_15005	3320372	3321457	-	dTDP-glucose 4%2C6-dehydratase		gene	gene3003	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15005
RY45_15010	RY45_15010		RY45_15010	3321655	3323616	-	nucleoside-diphosphate sugar epimerase		gene	gene3004	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15010
RY45_15015	RY45_15015		RY45_15015	3323675	3324229	-	lipid carrier : UDP-N-acetylgalactosaminyltransferase		gene	gene3005	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15015
RY45_15020	RY45_15020		RY45_15020	3325195	3326316	-	glycosyl transferase family 1		gene	gene3006	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15020
RY45_15025	RY45_15025		RY45_15025	3326313	3328247	-	asparagine synthase		gene	gene3007	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15025
RY45_15030	RY45_15030		RY45_15030	3333180	3334208	-	Vi polysaccharide biosynthesis protein VipB/TviC		gene	gene3008	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15030
RY45_15035	RY45_15035		RY45_15035	3334311	3335591	-	Vi polysaccharide biosynthesis protein VipA/TviB		gene	gene3009	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15035
RY45_15040	RY45_15040		RY45_15040	3336265	3336651	+	hypothetical protein		gene	gene3010	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15040
RY45_15045	RY45_15045		RY45_15045	3337404	3338819	-	multidrug transporter		gene	gene3011	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15045
RY45_15050	RY45_15050		RY45_15050	3338812	3341961	-	multidrug transporter		gene	gene3012	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15050
RY45_15055	RY45_15055		RY45_15055	3341979	3343172	-	hemolysin D		gene	gene3013	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15055
RY45_15060	RY45_15060		RY45_15060	3343316	3343957	+	TetR family transcriptional regulator		gene	gene3014	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15060
RY45_15065	RY45_15065		RY45_15065	3344210	3344713	+	hypothetical protein		gene	gene3015	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15065
RY45_15070	RY45_15070		RY45_15070	3344909	3346087	+	sodium:glutamate symporter		gene	gene3016	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15070
RY45_15075	RY45_15075		RY45_15075	3346136	3346504	-	glyoxalase		gene	gene3017	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15075
RY45_15080	RY45_15080		RY45_15080	3346618	3347490	-	palmitoyl-CoA hydrolase		gene	gene3018	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15080
RY45_15085	RY45_15085		RY45_15085	3347691	3348614	-	ribosomal large subunit pseudouridine synthase B		gene	gene3019	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15085
RY45_15090	RY45_15090		RY45_15090	3348607	3349203	-	condensin subunit ScpB		gene	gene3020	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15090
RY45_15095	RY45_15095		RY45_15095	3349239	3350093	-	rifampin ADP-ribosyl transferase		gene	gene3021	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15095
RY45_15100	RY45_15100		RY45_15100	3350143	3350763	-	hypothetical protein		gene	gene3022	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15100
RY45_15105	RY45_15105		RY45_15105	3350866	3351747	-	S-adenosylmethionine tRNA ribosyltransferase		gene	gene3023	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15105
RY45_15110	RY45_15110		RY45_15110	3352185	3353819	+	anthranilate synthase component I	with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine	gene	gene3024	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15110
RY45_15115	RY45_15115		RY45_15115	3353812	3354411	+	anthranilate synthase subunit II		gene	gene3025	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15115
RY45_15120	RY45_15120		RY45_15120	3354422	3355435	+	anthranilate phosphoribosyltransferase		gene	gene3026	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15120
RY45_15125	RY45_15125		RY45_15125	3355435	3356943	+	indole-3-glycerol phosphate synthase	monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate	gene	gene3027	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15125
RY45_15130	RY45_15130		RY45_15130	3357024	3358217	+	tryptophan synthase subunit beta	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate	gene	gene3028	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15130
RY45_15135	RY45_15135		RY45_15135	3358214	3359020	+	tryptophan synthase subunit alpha		gene	gene3029	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15135
RY45_15140	RY45_15140		RY45_15140	3360092	3361138	+	hypothetical protein		gene	gene3030	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15140
RY45_15145	RY45_15145		RY45_15145	3362321	3362854	-	membrane protein		gene	gene3031	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15145
RY45_15150	RY45_15150		RY45_15150	3362996	3363238	+	glutathione peroxidase		gene	gene3032	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15150
RY45_15155	RY45_15155		RY45_15155	3363436	3363978	+	hypothetical protein		gene	gene3033	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15155
RY45_15160	RY45_15160		RY45_15160	3364048	3364491	-	lysozyme inhibitor		gene	gene3034	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15160
RY45_15165	RY45_15165		RY45_15165	3364673	3365884	-	transporter		gene	gene3035	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15165
RY45_15170	RY45_15170	hypothetical protein	hypothetical protein	3367517	3370414	+		disrupted	pseudogene	gene3036	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15170
RY45_15175	RY45_15175		RY45_15175	3370999	3372102	+	transporter		gene	gene3037	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15175
RY45_15180	RY45_15180		RY45_15180	3372159	3372515	-	membrane protein		gene	gene3038	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15180
RY45_15185	RY45_15185		RY45_15185	3372935	3374617	+	secretion protein		gene	gene3039	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15185
RY45_15190	RY45_15190		RY45_15190	3374706	3376067	-	membrane protein		gene	gene3040	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15190
RY45_15195	RY45_15195		RY45_15195	3376257	3377153	-	protoheme IX farnesyltransferase	converts protoheme IX and farnesyl diphosphate to heme O	gene	gene3041	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15195
RY45_15200	RY45_15200		RY45_15200	3377165	3377494	-	cytochrome C oxidase		gene	gene3042	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15200
RY45_15205	RY45_15205		RY45_15205	3377495	3378106	-	cytochrome o ubiquinol oxidase subunit III		gene	gene3043	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15205
RY45_15210	RY45_15210		RY45_15210	3378111	3380087	-	cytochrome o ubiquinol oxidase subunit I		gene	gene3044	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15210
RY45_15215	RY45_15215		RY45_15215	3380087	3381130	-	cytochrome O ubiquinol oxidase		gene	gene3045	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15215
RY45_15220	RY45_15220		RY45_15220	3381767	3383692	+	spermidine dehydrogenase		gene	gene3046	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15220
RY45_15225	RY45_15225		RY45_15225	3383689	3384888	+	alcohol dehydrogenase		gene	gene3047	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15225
RY45_15230	RY45_15230		RY45_15230	3384951	3385286	-	hypothetical protein		gene	gene3048	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15230
RY45_15235	RY45_15235		RY45_15235	3385408	3386376	-	nucleoside hydrolase		gene	gene3049	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15235
RY45_15240	RY45_15240		RY45_15240	3386660	3387217	+	hypothetical protein		gene	gene3050	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15240
RY45_15245	RY45_15245		RY45_15245	3387243	3387446	-	hypothetical protein		gene	gene3051	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15245
RY45_15250	RY45_15250		RY45_15250	3387648	3388088	-	azurin		gene	gene3052	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15250
RY45_15255	RY45_15255		RY45_15255	3388418	3389458	+	thiamine biosynthesis lipoprotein		gene	gene3053	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15255
RY45_15260	RY45_15260		RY45_15260	3389648	3390853	-	major facilitator transporter		gene	gene3054	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15260
RY45_15265	RY45_15265		RY45_15265	3391180	3392826	+	chemotaxis protein CheY		gene	gene3055	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15265
RY45_15270	RY45_15270		RY45_15270	3392881	3393843	+	Kef-type K+ transport system%2C NAD-binding component		gene	gene3056	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15270
RY45_15275	RY45_15275		RY45_15275	3393955	3394761	+	exodeoxyribonuclease III		gene	gene3057	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15275
RY45_15280	RY45_15280		RY45_15280	3395100	3396299	+	hemolysin D		gene	gene3058	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15280
RY45_15285	RY45_15285		RY45_15285	3396309	3399437	+	RND transporter		gene	gene3059	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15285
RY45_15290	RY45_15290		RY45_15290	3399618	3400055	+	hypothetical protein		gene	gene3060	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15290
RY45_15295	RY45_15295		RY45_15295	3400331	3401863	+	copper transporter		gene	gene3061	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15295
RY45_15300	RY45_15300		RY45_15300	3401937	3405065	+	cation transporter		gene	gene3062	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15300
RY45_15305	RY45_15305		RY45_15305	3405124	3405480	+	secretion protein HlyD		gene	gene3063	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15305
RY45_15310	RY45_15310		RY45_15310	3405584	3406372	-	hypothetical protein		gene	gene3064	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15310
RY45_15315	RY45_15315		RY45_15315	3406601	3408295	-	cytochrome D ubiquinol oxidase subunit II		gene	gene3065	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15315
RY45_15320	RY45_15320	lplA	lplA	3408484	3409500	-	lipoate--protein ligase	Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins	gene	gene3066	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15320
RY45_15325	RY45_15325		RY45_15325	3409945	3412374	+	diguanylate cyclase		gene	gene3067	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15325
RY45_15330	RY45_15330		RY45_15330	3412435	3415632	-	multidrug transporter AcrB		gene	gene3068	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15330
RY45_15335	RY45_15335		RY45_15335	3415625	3416662	-	hemolysin D		gene	gene3069	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15335
RY45_15340	RY45_15340		RY45_15340	3416699	3417145	-	transporter		gene	gene3070	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15340
RY45_15345	RY45_15345		RY45_15345	3417159	3417572	-	membrane protein		gene	gene3071	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15345
RY45_15350	RY45_15350		RY45_15350	3417569	3417886	-	ArsR family transcriptional regulator		gene	gene3072	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15350
RY45_15355	RY45_15355		RY45_15355	3417975	3418160	+	rhodanese		gene	gene3073	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15355
RY45_15360	RY45_15360		RY45_15360	3418577	3418951	+	hypothetical protein		gene	gene3074	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15360
RY45_15365	RY45_15365		RY45_15365	3419155	3419883	+	methyltransferase		gene	gene3075	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15365
RY45_15370	RY45_15370		RY45_15370	3419945	3421087	-	molecular chaperone DnaJ	chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion	gene	gene3076	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15370
RY45_15375	RY45_15375	dnaK	dnaK	3421342	3423270	-	molecular chaperone DnaK	heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria	gene	gene3077	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15375
RY45_15380	RY45_15380		RY45_15380	3423574	3424149	-	molecular chaperone GrpE		gene	gene3078	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15380
RY45_15385	RY45_15385	ppnK	ppnK	3424418	3425302	+	inorganic polyphosphate kinase	catalyzes the phosphorylation of NAD to NADP	gene	gene3079	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15385
RY45_15390	RY45_15390		RY45_15390	3425414	3427078	+	recombination and repair protein		gene	gene3080	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15390
RY45_15395	RY45_15395		RY45_15395	3427669	3428562	+	pyrophosphatase		gene	gene3081	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15395
RY45_15400	RY45_15400		RY45_15400	3428923	3429363	+	hypothetical protein		gene	gene3082	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15400
RY45_15405	RY45_15405		RY45_15405	3429579	3430742	+	hemolysin secretion protein D		gene	gene3083	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15405
RY45_15410	RY45_15410		RY45_15410	3430739	3432682	+	macrolide transporter	with MacA is involved in the export of macrolide	gene	gene3084	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15410
RY45_15415	RY45_15415		RY45_15415	3432679	3434052	+	transporter		gene	gene3085	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15415
RY45_15420	RY45_15420		RY45_15420	3434225	3435031	+	vibriobactin utilization protein ViuB		gene	gene3086	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15420
RY45_15425	RY45_15425		RY45_15425	3435033	3435218	-	hypothetical protein		gene	gene3087	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15425
RY45_15430	RY45_15430		RY45_15430	3435291	3436397	+	phospho-2-dehydro-3-deoxyheptonate aldolase		gene	gene3088	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15430
RY45_15435	RY45_15435		RY45_15435	3436979	3437389	-	transcriptional regulator		gene	gene3089	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15435
RY45_15440	RY45_15440		RY45_15440	3437805	3438227	-	acetyltransferase		gene	gene3090	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15440
RY45_15445	RY45_15445		RY45_15445	3438414	3438914	+	hypothetical protein		gene	gene3091	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15445
RY45_15450	RY45_15450		RY45_15450	3438984	3439325	-	membrane protein		gene	gene3092	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15450
RY45_15455	RY45_15455	hypothetical protein	hypothetical protein	3440363	3440614	+		disrupted	pseudogene	gene3093	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15455
RY45_15460	RY45_15460		RY45_15460	3440998	3441477	+	hypothetical protein		gene	gene3094	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15460
RY45_15465	RY45_15465		RY45_15465	3441573	3442850	-	gamma-glutamylputrescine oxidoreductase	catalyzes the formation of gamma-glutamyl-gamma-aminobutyraldehyde from gamma-glutamylputrescine	gene	gene3095	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15465
RY45_15470	RY45_15470		RY45_15470	3442902	3443513	-	transcriptional regulator	regulates genes involved in putrescine degradation	gene	gene3096	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15470
RY45_15475	RY45_15475	gabD	gabD	3443824	3445287	+	succinate-semialdehyde dehydrogenase	catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent	gene	gene3097	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15475
RY45_15480	RY45_15480		RY45_15480	3445437	3446726	+	4-aminobutyrate aminotransferase	catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate	gene	gene3098	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15480
RY45_15485	RY45_15485		RY45_15485	3447084	3448427	+	Putrescine importer PuuP		gene	gene3099	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15485
RY45_15490	RY45_15490		RY45_15490	3448661	3448933	+	hypothetical protein		gene	gene3100	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15490
RY45_15495	RY45_15495		RY45_15495	3448933	3450276	+	Putrescine importer PuuP		gene	gene3101	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15495
RY45_15500	RY45_15500		RY45_15500	3450375	3450755	-	hypothetical protein		gene	gene3102	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15500
RY45_15505	RY45_15505		RY45_15505	3451004	3452158	+	sodium:phosphate symporter		gene	gene3103	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15505
RY45_15510	RY45_15510		RY45_15510	3452322	3452792	+	peptidylprolyl isomerase		gene	gene3104	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15510
RY45_15515	RY45_15515		RY45_15515	3453116	3453883	+	extradiol ring-cleavage dioxygenase		gene	gene3105	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15515
RY45_15520	RY45_15520		RY45_15520	3454047	3457316	+	virulence sensor protein BvgS		gene	gene3106	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15520
RY45_15525	RY45_15525		RY45_15525	3457506	3458183	+	Crp/Fnr family transcriptional regulator		gene	gene3107	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15525
RY45_15530	RY45_15530		RY45_15530	3458274	3459437	-	transporter		gene	gene3108	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15530
RY45_15535	RY45_15535	deoD	deoD	3459492	3460193	-	purine nucleoside phosphorylase	catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate	gene	gene3109	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15535
RY45_15540	RY45_15540		RY45_15540	3460482	3460862	-	hypothetical protein		gene	gene3110	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15540
RY45_15545	RY45_15545		RY45_15545	3460873	3461124	-	hypothetical protein		gene	gene3111	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15545
RY45_15550	RY45_15550		RY45_15550	3461417	3461917	+	hypothetical protein		gene	gene3112	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15550
RY45_15555	RY45_15555		RY45_15555	3463101	3463289	+	hypothetical protein		gene	gene3113	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15555
RY45_15560	RY45_15560		RY45_15560	3463663	3465234	-	ABC transporter ATPase		gene	gene3114	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15560
RY45_15565	RY45_15565		RY45_15565	3465665	3466579	+	hypothetical protein		gene	gene3115	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15565
RY45_15570	RY45_15570		RY45_15570	3466693	3467967	-	threonine synthase		gene	gene3116	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15570
RY45_15575	RY45_15575		RY45_15575	3467964	3468944	-	serine kinase		gene	gene3117	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15575
RY45_15580	RY45_15580	thrA	thrA	3468947	3471406	-	aspartate kinase	multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways	gene	gene3118	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15580
RY45_15585	RY45_15585		RY45_15585	3471667	3472359	-	RNA methyltransferase	member of the SPOUT superfamily of methyltransferases	gene	gene3119	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15585
RY45_15590	RY45_15590	aceK	aceK	3472555	3474282	+	isocitrate dehydrogenase	catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol	gene	gene3120	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15590
RY45_15595	RY45_15595		RY45_15595	3474398	3474796	-	hypothetical protein		gene	gene3121	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15595
RY45_15600	RY45_15600		RY45_15600	3474969	3475445	+	hypothetical protein		gene	gene3122	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15600
RY45_15605	RY45_15605		RY45_15605	3475451	3475930	-	ribonuclease activity regulator protein RraA	regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity	gene	gene3123	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15605
RY45_15610	RY45_15610		RY45_15610	3475973	3476389	-	hypothetical protein		gene	gene3124	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15610
RY45_15615	RY45_15615		RY45_15615	3476766	3477485	+	TorR family transcriptional regulator		gene	gene3125	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15615
RY45_15620	RY45_15620		RY45_15620	3477631	3477705	-	tRNA-Gly		tRNA	gene3126	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15620
RY45_15625	RY45_15625		RY45_15625	3477800	3477873	-	tRNA-Gly		tRNA	gene3127	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15625
RY45_15630	RY45_15630		RY45_15630	3478075	3479844	+	amino acid ABC transporter permease	in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c	gene	gene3128	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15630
RY45_15635	RY45_15635		RY45_15635	3479837	3481582	+	amino acid ABC transporter permease	in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c	gene	gene3129	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15635
RY45_15640	RY45_15640		RY45_15640	3481836	3482207	+	exopolysaccharide biosynthesis protein		gene	gene3130	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15640
RY45_15645	RY45_15645		RY45_15645	3482229	3482621	+	hypothetical protein		gene	gene3131	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15645
RY45_15650	RY45_15650		RY45_15650	3482692	3483672	-	isoflavone reductase		gene	gene3132	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15650
RY45_15655	RY45_15655		RY45_15655	3483923	3484630	+	tRNA (adenine(37)-N6)-methyltransferase		gene	gene3133	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15655
RY45_15660	RY45_15660		RY45_15660	3484694	3485815	-	3-oxoacyl-ACP synthase	catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs	gene	gene3134	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15660
RY45_15665	RY45_15665		RY45_15665	3485871	3487034	-	von Willebrand factor A		gene	gene3135	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15665
RY45_15670	RY45_15670		RY45_15670	3487038	3487880	-	ATPase AAA		gene	gene3136	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15670
RY45_15675	RY45_15675		RY45_15675	3488048	3489016	+	cysteine synthase		gene	gene3137	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15675
RY45_15680	RY45_15680		RY45_15680	3489459	3489716	+	PTS sugar transporter		gene	gene3138	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15680
RY45_15685	RY45_15685		RY45_15685	3489761	3491488	+	phosphoenolpyruvate-protein phosphotransferase	Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system	gene	gene3139	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15685
RY45_15690	RY45_15690		RY45_15690	3491532	3492041	+	PTS system glucose-specific transporter subunit IIA	phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel	gene	gene3140	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15690
RY45_15695	RY45_15695		RY45_15695	3492121	3493083	-	diguanylate cyclase		gene	gene3141	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15695
RY45_15700	RY45_15700		RY45_15700	3493145	3493963	-	ABC transporter substrate-binding protein		gene	gene3142	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15700
RY45_15705	RY45_15705		RY45_15705	3494183	3494731	+	cytochrome B561		gene	gene3143	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15705
RY45_15710	RY45_15710		RY45_15710	3494773	3495414	-	hypothetical protein		gene	gene3144	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15710
RY45_15715	RY45_15715		RY45_15715	3495589	3499341	-	exonuclease SbcC		gene	gene3145	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15715
RY45_15720	RY45_15720		RY45_15720	3499338	3499520	-	exonuclease SbcC		gene	gene3146	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15720
RY45_15725	RY45_15725		RY45_15725	3499517	3500743	-	metallophosphatase		gene	gene3147	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15725
RY45_15730	RY45_15730		RY45_15730	3500845	3501273	-	acetyltransferase		gene	gene3148	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15730
RY45_15735	RY45_15735		RY45_15735	3501454	3502365	+	recombination associated protein	Required for efficient pilin antigenic variation	gene	gene3149	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15735
RY45_15740	RY45_15740		RY45_15740	3502546	3504324	+	gamma-glutamyltransferase		gene	gene3150	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15740
RY45_15745	RY45_15745		RY45_15745	3504712	3506355	+	cation:proton antiport protein	YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein	gene	gene3151	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15745
RY45_15750	RY45_15750		RY45_15750	3506756	3507937	+	peptidase M28		gene	gene3152	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15750
RY45_15755	RY45_15755		RY45_15755	3508012	3508218	-	hypothetical protein		gene	gene3153	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15755
RY45_15760	RY45_15760		RY45_15760	3508523	3509935	+	pyruvate kinase	catalyzes the formation of phosphoenolpyruvate from pyruvate	gene	gene3154	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15760
RY45_15765	RY45_15765		RY45_15765	3510085	3513408	+	hypothetical protein		gene	gene3155	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15765
RY45_15770	RY45_15770		RY45_15770	3513621	3514454	+	hypothetical protein		gene	gene3156	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15770
RY45_15775	RY45_15775		RY45_15775	3514519	3515526	+	6-phosphogluconolactonase		gene	gene3157	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15775
RY45_15780	RY45_15780		RY45_15780	3515621	3516859	-	uracil transporter		gene	gene3158	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15780
RY45_15785	RY45_15785		RY45_15785	3517165	3518472	+	intein-containing protein		gene	gene3159	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15785
RY45_15790	RY45_15790		RY45_15790	3518469	3518810	+	antigen		gene	gene3160	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15790
RY45_15795	RY45_15795		RY45_15795	3518880	3520595	-	malate dehydrogenase	malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate	gene	gene3161	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15795
RY45_15800	RY45_15800		RY45_15800	3520836	3521966	+	two-component hybrid sensor and regulator		gene	gene3162	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15800
RY45_15805	RY45_15805		RY45_15805	3522033	3523004	-	formate dehydrogenase		gene	gene3163	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15805
RY45_15810	RY45_15810		RY45_15810	3523001	3523624	-	formate dehydrogenase		gene	gene3164	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15810
RY45_15815	RY45_15815		RY45_15815	3523629	3526517	-	formate dehydrogenase		gene	gene3165	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15815
RY45_15820	RY45_15820		RY45_15820	3526541	3526744	-	transcriptional initiation protein Tat		gene	gene3166	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15820
RY45_15825	RY45_15825		RY45_15825	3526814	3527434	-	TorD family cytoplasmic chaperone		gene	gene3167	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15825
RY45_15830	RY45_15830		RY45_15830	3527445	3529175	-	ferredoxin		gene	gene3168	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15830
RY45_15835	RY45_15835		RY45_15835	3529280	3529882	-	hypothetical protein		gene	gene3169	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15835
RY45_15840	RY45_15840		RY45_15840	3529875	3530453	-	hypothetical protein		gene	gene3170	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15840
RY45_15845	RY45_15845		RY45_15845	3531904	3532761	+	formate dehydrogenase		gene	gene3171	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15845
RY45_15850	RY45_15850		RY45_15850	3532839	3533717	+	DNA-binding protein		gene	gene3172	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15850
RY45_15855	RY45_15855		RY45_15855	3533877	3535970	-	histidine kinase		gene	gene3173	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15855
RY45_15860	RY45_15860		RY45_15860	3536002	3537357	-	Fis family transcriptional regulator		gene	gene3174	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15860
RY45_15865	RY45_15865		RY45_15865	3537606	3538448	+	tungsten ABC transporter substrate-binding protein		gene	gene3175	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15865
RY45_15870	RY45_15870		RY45_15870	3538516	3539217	+	ABC transporter permease		gene	gene3176	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15870
RY45_15875	RY45_15875		RY45_15875	3539333	3540028	+	ABC transporter ATP-binding protein		gene	gene3177	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15875
RY45_15880	RY45_15880		RY45_15880	3540000	3540638	+	molybdopterin-guanine dinucleotide biosynthesis protein A		gene	gene3178	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15880
RY45_15885	RY45_15885		RY45_15885	3540635	3542380	+	molybdopterin-guanine dinucleotide biosynthesis protein MobB		gene	gene3179	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15885
RY45_15890	RY45_15890		RY45_15890	3542444	3543508	+	membrane protein		gene	gene3180	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15890
RY45_15895	RY45_15895		RY45_15895	3543579	3544952	-	metal-dependent phosphohydrolase		gene	gene3181	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15895
RY45_15900	RY45_15900		RY45_15900	3545040	3545660	-	membrane protein		gene	gene3182	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15900
RY45_15905	RY45_15905		RY45_15905	3545789	3547084	-	chemotaxis protein		gene	gene3183	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15905
RY45_15910	RY45_15910		RY45_15910	3547278	3547739	-	acetyltransferase		gene	gene3184	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15910
RY45_15915	RY45_15915		RY45_15915	3547818	3548261	-	membrane protein		gene	gene3185	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15915
RY45_15920	RY45_15920		RY45_15920	3548267	3549022	-	hypothetical protein		gene	gene3186	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15920
RY45_15925	RY45_15925		RY45_15925	3549015	3549863	-	hypothetical protein		gene	gene3187	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15925
RY45_15930	RY45_15930		RY45_15930	3549935	3550198	-	membrane protein		gene	gene3188	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15930
RY45_15935	RY45_15935		RY45_15935	3550557	3550757	-	membrane protein		gene	gene3189	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15935
RY45_15940	RY45_15940		RY45_15940	3550972	3551265	+	hypothetical protein		gene	gene3190	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15940
RY45_15945	RY45_15945		RY45_15945	3551328	3551401	-	tRNA-Cys		tRNA	gene3191	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15945
RY45_15950	RY45_15950		RY45_15950	3551457	3551532	-	tRNA-Gly		tRNA	gene3192	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15950
RY45_15955	RY45_15955		RY45_15955	3551783	3555220	+	chemotaxis protein CheY		gene	gene3193	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15955
RY45_15960	RY45_15960		RY45_15960	3555638	3557323	+	peptide ABC transporter substrate-binding protein		gene	gene3194	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15960
RY45_15965	RY45_15965		RY45_15965	3557443	3558426	+	peptide ABC transporter permease		gene	gene3195	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15965
RY45_15970	RY45_15970		RY45_15970	3558434	3559348	+	peptide ABC transporter permease		gene	gene3196	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15970
RY45_15975	RY45_15975		RY45_15975	3559345	3560367	+	sugar ABC transporter ATP-binding protein		gene	gene3197	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15975
RY45_15980	RY45_15980		RY45_15980	3560379	3561371	+	chemotaxis protein		gene	gene3198	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15980
RY45_15985	RY45_15985		RY45_15985	3561474	3563201	+	chitobiase		gene	gene3199	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15985
RY45_15990	RY45_15990		RY45_15990	3563194	3564066	+	N-acetylglucosamine kinase		gene	gene3200	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15990
RY45_15995	RY45_15995		RY45_15995	3564227	3566095	+	beta-hexosaminidase		gene	gene3201	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_15995
RY45_16000	RY45_16000		RY45_16000	3566313	3567866	+	aerotaxis receptor Aer		gene	gene3202	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16000
RY45_16005	RY45_16005		RY45_16005	3567934	3568290	+	cysteine methyltransferase		gene	gene3203	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16005
RY45_16010	RY45_16010		RY45_16010	3568588	3571209	-	DNA topoisomerase I	catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity	gene	gene3204	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16010
RY45_16015	RY45_16015		RY45_16015	3571571	3572908	+	N-succinylarginine dihydrolase		gene	gene3205	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16015
RY45_16020	RY45_16020		RY45_16020	3572994	3574001	-	peptidase S49		gene	gene3206	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16020
RY45_16025	RY45_16025		RY45_16025	3574235	3574990	+	3-oxoacyl-ACP reductase		gene	gene3207	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16025
RY45_16030	RY45_16030		RY45_16030	3575090	3575974	+	LysR family transcriptional regulator		gene	gene3208	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16030
RY45_16035	RY45_16035		RY45_16035	3576042	3577214	-	sugar transporter		gene	gene3209	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16035
RY45_16040	RY45_16040		RY45_16040	3577376	3578512	+	aspartate aminotransferase		gene	gene3210	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16040
RY45_16045	RY45_16045		RY45_16045	3578775	3580163	+	immunogenic protein		gene	gene3211	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16045
RY45_16050	RY45_16050		RY45_16050	3580234	3581142	-	LysR family transcriptional regulator		gene	gene3212	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16050
RY45_16055	RY45_16055		RY45_16055	3581329	3582585	+	adenylosuccinate synthetase		gene	gene3213	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16055
RY45_16060	RY45_16060		RY45_16060	3582801	3583337	+	kinase inhibitor		gene	gene3214	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16060
RY45_16065	RY45_16065		RY45_16065	3583349	3584146	+	AraC family transcriptional regulator		gene	gene3215	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16065
RY45_16070	RY45_16070		RY45_16070	3584346	3586826	+	isomerase		gene	gene3216	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16070
RY45_16075	RY45_16075		RY45_16075	3586906	3588105	-	tyrosine--tRNA ligase	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)	gene	gene3217	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16075
RY45_16080	RY45_16080		RY45_16080	3588220	3589530	+	peptidase M23		gene	gene3218	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16080
RY45_16085	RY45_16085		RY45_16085	3589887	3590990	+	anhydro-N-acetylmuramic acid kinase		gene	gene3219	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16085
RY45_16090	RY45_16090		RY45_16090	3591214	3592077	-	chaperone protein HchA	Hsp31 stabilizes early unfolding protein intermediates under severe heat stress	gene	gene3220	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16090
RY45_16095	RY45_16095		RY45_16095	3592902	3594167	+	endoribonuclease L-PSP		gene	gene3221	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16095
RY45_16100	RY45_16100		RY45_16100	3594313	3594588	-	hypothetical protein		gene	gene3222	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16100
RY45_16105	RY45_16105		RY45_16105	3595137	3597128	-	transketolase	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase	gene	gene3223	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16105
RY45_16110	RY45_16110		RY45_16110	3597471	3598622	+	S-adenosylmethionine synthetase	catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase	gene	gene3224	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16110
RY45_16115	RY45_16115		RY45_16115	3598692	3599225	+	SprT protein		gene	gene3225	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16115
RY45_16120	RY45_16120		RY45_16120	3599303	3599986	+	deoxyribonuclease		gene	gene3226	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16120
RY45_16125	RY45_16125		RY45_16125	3600050	3600781	+	16S rRNA methyltransferase		gene	gene3227	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16125
RY45_16130	RY45_16130		RY45_16130	3600828	3601781	+	glutathione synthetase	catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione	gene	gene3228	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16130
RY45_16135	RY45_16135		RY45_16135	3601898	3603523	-	chemotaxis protein		gene	gene3229	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16135
RY45_16140	RY45_16140		RY45_16140	3603642	3604196	+	hypothetical protein		gene	gene3230	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16140
RY45_16145	RY45_16145		RY45_16145	3604243	3604665	+	Holliday junction resolvase	similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function	gene	gene3231	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16145
RY45_16150	RY45_16150	tppB	tppB	3604713	3606218	-	peptide ABC transporter permease	mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation	gene	gene3232	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16150
RY45_16155	RY45_16155		RY45_16155	3606770	3607741	-	transcriptional regulator	Involved in anaerobic NO protection	gene	gene3233	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16155
RY45_16160	RY45_16160		RY45_16160	3607913	3608866	-	hypothetical protein		gene	gene3234	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16160
RY45_16165	RY45_16165		RY45_16165	3608897	3609220	-	hypothetical protein		gene	gene3235	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16165
RY45_16170	RY45_16170	ampC	ampC	3609941	3611089	-	beta-lactamase/D-alanine carboxypeptidase		gene	gene3236	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16170
RY45_16175	RY45_16175		RY45_16175	3611280	3612200	+	ATPase AAA		gene	gene3237	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16175
RY45_16180	RY45_16180		RY45_16180	3612200	3613186	+	hypothetical protein		gene	gene3238	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16180
RY45_16185	RY45_16185		RY45_16185	3613173	3615146	+	transglutaminase		gene	gene3239	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16185
RY45_16190	RY45_16190		RY45_16190	3615389	3616831	-	sodium:alanine symporter		gene	gene3240	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16190
RY45_16195	RY45_16195		RY45_16195	3617575	3618525	+	transaldolase		gene	gene3241	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16195
RY45_16200	RY45_16200		RY45_16200	3618686	3618868	+	hypothetical protein		gene	gene3242	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16200
RY45_16205	RY45_16205		RY45_16205	3618920	3619468	-	hemerythrin		gene	gene3243	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16205
RY45_16210	RY45_16210		RY45_16210	3619625	3620293	-	uracil-DNA glycosylase		gene	gene3244	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16210
RY45_16215	RY45_16215		RY45_16215	3621137	3621517	+	autonomous glycyl radical cofactor GrcA	stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit	gene	gene3245	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16215
RY45_16220	RY45_16220		RY45_16220	3621629	3622909	-	C4-dicarboxylate transporter	involved in the transport of C4-dicarboxylates across the membrane	gene	gene3246	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16220
RY45_16225	RY45_16225		RY45_16225	3623216	3624070	-	2-dehydro-3-deoxyphosphooctonate aldolase	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis	gene	gene3247	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16225
RY45_16230	RY45_16230		RY45_16230	3624246	3625046	-	hypothetical protein		gene	gene3248	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16230
RY45_16235	RY45_16235		RY45_16235	3625058	3625441	-	invasion protein		gene	gene3249	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16235
RY45_16240	RY45_16240		RY45_16240	3625485	3626333	-	SAM-dependent methyltransferase		gene	gene3250	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16240
RY45_16245	RY45_16245	prfA	prfA	3626333	3627421	-	peptide chain release factor 1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2	gene	gene3251	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16245
RY45_16250	RY45_16250	hemA	hemA	3627473	3628732	-	glutamyl-tRNA reductase	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins	gene	gene3252	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16250
RY45_16255	RY45_16255		RY45_16255	3628854	3629438	+	membrane protein		gene	gene3253	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16255
RY45_16260	RY45_16260		RY45_16260	3629413	3629811	-	hypothetical protein		gene	gene3254	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16260
RY45_16265	RY45_16265		RY45_16265	3630313	3630387	+	tRNA-Gln		tRNA	gene3255	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16265
RY45_16270	RY45_16270		RY45_16270	3630697	3631644	+	ribose-phosphate pyrophosphokinase	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP	gene	gene3256	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16270
RY45_16275	RY45_16275		RY45_16275	3631747	3633738	+	5'-nucleotidase		gene	gene3257	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16275
RY45_16280	RY45_16280		RY45_16280	3633936	3634532	+	peptidyl-tRNA hydrolase	Enables the recycling of peptidyl-tRNAs produced at termination of translation	gene	gene3258	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16280
RY45_16285	RY45_16285	ychF	ychF	3634624	3635715	+	GTP-binding protein	EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1	gene	gene3259	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16285
RY45_16290	RY45_16290		RY45_16290	3635951	3636027	+	tRNA-Met		tRNA	gene3260	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16290
RY45_16295	RY45_16295		RY45_16295	3636036	3636110	+	tRNA-Gln		tRNA	gene3261	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16295
RY45_16300	RY45_16300		RY45_16300	3636257	3636331	+	tRNA-Gln		tRNA	gene3262	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16300
RY45_16305	RY45_16305		RY45_16305	3636373	3636447	+	tRNA-Gln		tRNA	gene3263	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16305
RY45_16310	RY45_16310		RY45_16310	3636486	3636562	+	tRNA-Met		tRNA	gene3264	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16310
RY45_16315	RY45_16315		RY45_16315	3636608	3636682	+	tRNA-Gln		tRNA	gene3265	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16315
RY45_16320	RY45_16320		RY45_16320	3636719	3636795	+	tRNA-Met		tRNA	gene3266	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16320
RY45_16325	RY45_16325		RY45_16325	3636804	3636887	+	tRNA-Leu		tRNA	gene3267	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16325
RY45_16330	RY45_16330		RY45_16330	3637129	3638961	-	citrate transporter		gene	gene3268	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16330
RY45_16335	RY45_16335		RY45_16335	3639224	3639946	+	nicotinamide mononucleotide transporter		gene	gene3269	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16335
RY45_16340	RY45_16340		RY45_16340	3639943	3640668	+	uridine phosphorylase		gene	gene3270	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16340
RY45_16345	RY45_16345		RY45_16345	3640796	3641467	+	cAMP-binding protein		gene	gene3271	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16345
RY45_16350	RY45_16350		RY45_16350	3641511	3641828	+	valyl-tRNA synthetase		gene	gene3272	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16350
RY45_16355	RY45_16355		RY45_16355	3641896	3642297	+	membrane protein		gene	gene3273	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16355
RY45_16360	RY45_16360		RY45_16360	3642497	3644122	+	trehalose-6-phosphate hydrolase		gene	gene3274	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16360
RY45_16365	RY45_16365		RY45_16365	3644534	3646324	+	hypothetical protein		gene	gene3275	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16365
RY45_16370	RY45_16370		RY45_16370	3646811	3650356	+	pyruvate-flavodoxin oxidoreductase		gene	gene3276	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16370
RY45_16375	RY45_16375		RY45_16375	3650424	3651788	-	MFS transporter		gene	gene3277	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16375
RY45_16380	RY45_16380		RY45_16380	3651966	3652562	+	haloacid dehalogenase		gene	gene3278	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16380
RY45_16385	RY45_16385		RY45_16385	3652658	3653620	+	transposase		gene	gene3279	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16385
RY45_16390	RY45_16390		RY45_16390	3653688	3654485	-	succinyldiaminopimelate aminotransferase		gene	gene3280	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16390
RY45_16395	RY45_16395	astD	astD	3654595	3656064	-	succinylglutamate-semialdehyde dehydrogenase	a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity%3B converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH	gene	gene3281	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16395
RY45_16400	RY45_16400		RY45_16400	3656135	3657154	-	arginine N-succinyltransferase		gene	gene3282	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16400
RY45_16405	RY45_16405		RY45_16405	3657230	3658447	-	acetylornithine aminotransferase		gene	gene3283	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16405
RY45_16410	RY45_16410		RY45_16410	3658725	3659306	-	anthranilate synthase component II	TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity	gene	gene3284	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16410
RY45_16415	RY45_16415		RY45_16415	3659327	3659542	-	hypothetical protein		gene	gene3285	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16415
RY45_16420	RY45_16420		RY45_16420	3659666	3660670	-	tryptophanyl-tRNA synthetase		gene	gene3286	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16420
RY45_16425	RY45_16425		RY45_16425	3660710	3661378	-	phosphoglycolate phosphatase		gene	gene3287	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16425
RY45_16430	RY45_16430		RY45_16430	3661365	3662039	-	ribulose-phosphate 3-epimerase		gene	gene3288	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16430
RY45_16435	RY45_16435		RY45_16435	3662429	3663301	-	DNA adenine methylase		gene	gene3289	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16435
RY45_16440	RY45_16440		RY45_16440	3663372	3664979	-	cell division protein DamX		gene	gene3290	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16440
RY45_16445	RY45_16445		RY45_16445	3664969	3666051	-	3-dehydroquinate synthase		gene	gene3291	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16445
RY45_16450	RY45_16450	aroK	aroK	3666066	3666584	-	shikimate kinase	type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis	gene	gene3292	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16450
RY45_16455	RY45_16455		RY45_16455	3666776	3668977	-	pilus assembly protein PilQ		gene	gene3293	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16455
RY45_16460	RY45_16460		RY45_16460	3668992	3669522	-	pilus assembly protein PilP		gene	gene3294	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16460
RY45_16465	RY45_16465		RY45_16465	3669519	3670118	-	pilus assembly protein PilP		gene	gene3295	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16465
RY45_16470	RY45_16470		RY45_16470	3670115	3670693	-	fimbrial protein		gene	gene3296	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16470
RY45_16475	RY45_16475		RY45_16475	3670681	3671739	-	pilus assembly protein PilM		gene	gene3297	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16475
RY45_16480	RY45_16480		RY45_16480	3672038	3674527	+	penicillin-sensitive transpeptidase		gene	gene3298	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16480
RY45_16485	RY45_16485		RY45_16485	3674602	3675498	-	transcriptional regulator	Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA	gene	gene3299	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16485
RY45_16490	RY45_16490		RY45_16490	3675654	3677294	-	chemotaxis protein		gene	gene3300	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16490
RY45_16495	RY45_16495		RY45_16495	3677517	3678152	-	protein-disulfide isomerase		gene	gene3301	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16495
RY45_16500	RY45_16500		RY45_16500	3678233	3679093	-	beta-lactamase		gene	gene3302	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16500
RY45_16505	RY45_16505		RY45_16505	3679220	3680119	+	LysR family transcriptional regulator		gene	gene3303	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16505
RY45_16510	RY45_16510		RY45_16510	3680202	3680978	-	hypothetical protein		gene	gene3304	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16510
RY45_16515	RY45_16515		RY45_16515	3681155	3682009	+	hypothetical protein		gene	gene3305	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16515
RY45_16520	RY45_16520		RY45_16520	3682053	3682877	+	peptidase M23		gene	gene3306	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16520
RY45_16525	RY45_16525		RY45_16525	3682955	3684289	-	multidrug transporter MatE		gene	gene3307	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16525
RY45_16530	RY45_16530		RY45_16530	3684445	3687723	+	mechanosensitive ion channel protein MscS		gene	gene3308	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16530
RY45_16535	RY45_16535		RY45_16535	3687746	3688465	+	glycerophosphodiester phosphodiesterase		gene	gene3309	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16535
RY45_16540	RY45_16540		RY45_16540	3688591	3690468	+	chemotaxis protein		gene	gene3310	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16540
RY45_16545	RY45_16545		RY45_16545	3690986	3692770	+	fumarate reductase	part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB	gene	gene3311	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16545
RY45_16550	RY45_16550		RY45_16550	3692763	3693497	+	fumarate reductase	part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB	gene	gene3312	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16550
RY45_16555	RY45_16555		RY45_16555	3693514	3693912	+	fumarate reductase		gene	gene3313	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16555
RY45_16560	RY45_16560		RY45_16560	3694025	3694381	+	fumarate reductase		gene	gene3314	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16560
RY45_16565	RY45_16565		RY45_16565	3694527	3695225	-	hydrolase		gene	gene3315	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16565
RY45_16570	RY45_16570		RY45_16570	3695319	3695960	+	TetR family transcriptional regulator		gene	gene3316	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16570
RY45_16575	RY45_16575		RY45_16575	3696094	3696870	-	hypothetical protein		gene	gene3317	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16575
RY45_16580	RY45_16580		RY45_16580	3696927	3698147	-	hypothetical protein		gene	gene3318	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16580
RY45_16585	RY45_16585		RY45_16585	3698281	3698919	-	methyltransferase		gene	gene3319	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16585
RY45_16590	RY45_16590		RY45_16590	3699137	3699781	+	thermostable hemolysin		gene	gene3320	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16590
RY45_16595	RY45_16595		RY45_16595	3699778	3701244	+	long-chain acyl-CoA synthetase		gene	gene3321	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16595
RY45_16600	RY45_16600		RY45_16600	3701241	3701900	+	long-chain fatty acid--CoA ligase		gene	gene3322	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16600
RY45_16605	RY45_16605		RY45_16605	3701897	3702742	+	short-chain dehydrogenase		gene	gene3323	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16605
RY45_16610	RY45_16610		RY45_16610	3702744	3703382	+	hypothetical protein		gene	gene3324	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16610
RY45_16615	RY45_16615		RY45_16615	3703466	3704155	+	XRE family transcriptional regulator		gene	gene3325	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16615
RY45_16620	RY45_16620		RY45_16620	3704152	3705591	+	histidine kinase		gene	gene3326	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16620
RY45_16625	RY45_16625		RY45_16625	3705647	3706153	-	ATP-dependent Zn protease		gene	gene3327	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16625
RY45_16630	RY45_16630		RY45_16630	3706559	3707602	+	guanosine 5'-monophosphate oxidoreductase	catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate	gene	gene3328	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16630
RY45_16635	RY45_16635		RY45_16635	3707697	3708905	+	hypothetical protein		gene	gene3329	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16635
RY45_16640	RY45_16640		RY45_16640	3708949	3709515	+	elongation factor P		gene	gene3330	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16640
RY45_16645	RY45_16645		RY45_16645	3709656	3710282	+	hypothetical protein		gene	gene3331	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16645
RY45_16650	RY45_16650		RY45_16650	3710350	3711102	+	hypothetical protein		gene	gene3332	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16650
RY45_16655	RY45_16655		RY45_16655	3711220	3712176	+	glycerate dehydrogenase	Catalyzes the reduction of hydroxypyruvate to form D-glycerate%2C using NADH as an electron donor	gene	gene3333	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16655
RY45_16660	RY45_16660		RY45_16660	3712238	3712708	-	surface antigen family protein		gene	gene3334	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16660
RY45_16665	RY45_16665		RY45_16665	3712918	3714471	-	diguanylate cyclase		gene	gene3335	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16665
RY45_16670	RY45_16670		RY45_16670	3714760	3715362	+	nitroreductase		gene	gene3336	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16670
RY45_16675	RY45_16675		RY45_16675	3715411	3716061	-	haloacid dehalogenase		gene	gene3337	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16675
RY45_16680	RY45_16680		RY45_16680	3716058	3716303	-	hypothetical protein		gene	gene3338	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16680
RY45_16685	RY45_16685		RY45_16685	3716421	3717329	+	LysR family transcriptional regulator		gene	gene3339	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16685
RY45_16690	RY45_16690		RY45_16690	3717400	3718356	-	diguanylate cyclase		gene	gene3340	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16690
RY45_16695	RY45_16695		RY45_16695	3718518	3719162	-	DNA-binding protein		gene	gene3341	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16695
RY45_16700	RY45_16700		RY45_16700	3719279	3719845	-	isochorismatase		gene	gene3342	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16700
RY45_16705	RY45_16705	ubiF	ubiF	3719879	3721042	-	2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase	catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q	gene	gene3343	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16705
RY45_16710	RY45_16710		RY45_16710	3721310	3722743	+	(dimethylallyl)adenosine tRNA methylthiotransferase	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)	gene	gene3344	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16710
RY45_16715	RY45_16715		RY45_16715	3722799	3723842	+	nucleoside triphosphate hydrolase		gene	gene3345	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16715
RY45_16720	RY45_16720		RY45_16720	3723839	3724303	+	metal-binding heat shock protein		gene	gene3346	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16720
RY45_16725	RY45_16725		RY45_16725	3724399	3725283	+	magnesium transporter		gene	gene3347	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16725
RY45_16730	RY45_16730	lnt	lnt	3725494	3727038	+	apolipoprotein acyltransferase	Transfers the fatty acyl group on membrane lipoproteins	gene	gene3348	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16730
RY45_16735	RY45_16735		RY45_16735	3727126	3727614	-	hypothetical protein		gene	gene3349	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16735
RY45_16740	RY45_16740	leuS	leuS	3727760	3730369	+	leucine--tRNA ligase	leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase	gene	gene3350	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16740
RY45_16745	RY45_16745		RY45_16745	3730422	3730904	+	lipoprotein		gene	gene3351	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16745
RY45_16750	RY45_16750		RY45_16750	3730932	3731075	+	DNA polymerase III subunit delta		gene	gene3352	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16750
RY45_16755	RY45_16755		RY45_16755	3731075	3732106	+	DNA polymerase III subunit delta		gene	gene3353	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16755
RY45_16760	RY45_16760		RY45_16760	3732147	3732791	+	nicotinate-nucleotide adenylyltransferase		gene	gene3354	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16760
RY45_16765	RY45_16765		RY45_16765	3732978	3733319	+	ribosome-associated protein		gene	gene3355	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16765
RY45_16770	RY45_16770		RY45_16770	3733342	3733809	+	50S rRNA methyltransferase		gene	gene3356	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16770
RY45_16775	RY45_16775		RY45_16775	3734074	3735996	+	penicillin-binding protein 2		gene	gene3357	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16775
RY45_16780	RY45_16780		RY45_16780	3735989	3737092	+	rod shape-determining protein RodA		gene	gene3358	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16780
RY45_16785	RY45_16785		RY45_16785	3737092	3738090	+	lytic murein transglycosylase		gene	gene3359	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16785
RY45_16790	RY45_16790		RY45_16790	3738032	3738997	+	lipoprotein		gene	gene3360	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16790
RY45_16795	RY45_16795		RY45_16795	3739193	3740383	+	D-alanyl-D-alanine carboxypeptidase		gene	gene3361	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16795
RY45_16800	RY45_16800		RY45_16800	3740676	3740939	+	hypothetical protein		gene	gene3362	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16800
RY45_16805	RY45_16805		RY45_16805	3741036	3741740	+	octanoyltransferase		gene	gene3363	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16805
RY45_16810	RY45_16810		RY45_16810	3741826	3742806	+	lipoyl synthase	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group	gene	gene3364	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16810
RY45_16815	RY45_16815	transposase	transposase	3744982	3745176	+		disrupted	pseudogene	gene3365	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16815
RY45_16820	RY45_16820		RY45_16820	3746386	3747684	+	hypothetical protein		gene	gene3366	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16820
RY45_16825	RY45_16825	hypothetical protein	hypothetical protein	3750604	3751227	-		disrupted	pseudogene	gene3367	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16825
RY45_16830	RY45_16830		RY45_16830	3751227	3752123	-	ATPase AAA		gene	gene3368	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16830
RY45_16835	RY45_16835		RY45_16835	3752120	3754000	-	transposase		gene	gene3369	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16835
RY45_16840	RY45_16840		RY45_16840	3753997	3754647	-	transposase		gene	gene3370	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16840
RY45_16845	RY45_16845		RY45_16845	3754956	3755459	+	acetyltransferase		gene	gene3371	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16845
RY45_16850	RY45_16850		RY45_16850	3755598	3756167	+	hypothetical protein		gene	gene3372	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16850
RY45_16855	RY45_16855		RY45_16855	3756212	3756811	-	Na(+)-translocating NADH-quinone reductase subunit E	Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.	gene	gene3373	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16855
RY45_16860	RY45_16860		RY45_16860	3756966	3757376	-	hypothetical protein		gene	gene3374	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16860
RY45_16865	RY45_16865		RY45_16865	3757595	3758098	-	GCN5 family acetyltransferase		gene	gene3375	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16865
RY45_16870	RY45_16870		RY45_16870	3758138	3759319	-	methyltransferase		gene	gene3376	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16870
RY45_16875	RY45_16875		RY45_16875	3759470	3761200	-	ssDNA exonuclease RecJ	5'-3' single-stranded-DNA-specific exonuclease	gene	gene3377	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16875
RY45_16880	RY45_16880		RY45_16880	3761166	3761882	-	thiol:disulfide interchange protein DsbC		gene	gene3378	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16880
RY45_16885	RY45_16885	mscL	mscL	3762142	3762549	+	large-conductance mechanosensitive channel	forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock	gene	gene3379	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16885
RY45_16890	RY45_16890	xerD	xerD	3762610	3763509	-	site-specific tyrosine recombinase XerD	site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs	gene	gene3380	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16890
RY45_16895	RY45_16895		RY45_16895	3763697	3764215	+	flavodoxin		gene	gene3381	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16895
RY45_16900	RY45_16900		RY45_16900	3764662	3766062	+	peptidase C69		gene	gene3382	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16900
RY45_16905	RY45_16905		RY45_16905	3766062	3767402	+	Zn-dependent protease		gene	gene3383	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16905
RY45_16910	RY45_16910		RY45_16910	3767578	3767970	+	glyoxalase		gene	gene3384	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16910
RY45_16915	RY45_16915		RY45_16915	3768053	3768979	-	L%2CD-transpeptidase	catalyzes th removal of D-alanine and attachment of the murein lipoprotein to the peptidoglycan tetrapeptide chain	gene	gene3385	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16915
RY45_16920	RY45_16920		RY45_16920	3769258	3770541	-	N-glycosyltransferase		gene	gene3386	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16920
RY45_16925	RY45_16925		RY45_16925	3770541	3771416	-	Pyoverdine biosynthesis protein		gene	gene3387	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16925
RY45_16930	RY45_16930		RY45_16930	3771427	3772401	-	paerucumarin biosynthesis protein PvcA		gene	gene3388	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16930
RY45_16935	RY45_16935		RY45_16935	3772958	3773794	-	phospholipase		gene	gene3389	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16935
RY45_16940	RY45_16940		RY45_16940	3773935	3775296	+	succinyl-CoA synthetase subunit alpha		gene	gene3390	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16940
RY45_16945	RY45_16945		RY45_16945	3775353	3778460	-	tetrathionate reductase subunit A		gene	gene3391	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16945
RY45_16950	RY45_16950		RY45_16950	3778460	3779566	-	polysulfide reductase		gene	gene3392	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16950
RY45_16955	RY45_16955		RY45_16955	3779556	3780344	-	tetrathionate reductase subunit B		gene	gene3393	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16955
RY45_16960	RY45_16960		RY45_16960	3780604	3782583	+	histidine kinase		gene	gene3394	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16960
RY45_16965	RY45_16965		RY45_16965	3782585	3783196	+	tetrathionate response regulatory protein TtrR		gene	gene3395	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16965
RY45_16970	RY45_16970		RY45_16970	3783420	3785114	+	histidine kinase		gene	gene3396	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16970
RY45_16975	RY45_16975		RY45_16975	3785108	3785845	+	response regulator		gene	gene3397	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16975
RY45_16980	RY45_16980		RY45_16980	3786061	3787869	+	carbon starvation protein CstA		gene	gene3398	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16980
RY45_16985	RY45_16985		RY45_16985	3788062	3788790	+	alpha-aspartyl dipeptidase		gene	gene3399	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16985
RY45_16990	RY45_16990		RY45_16990	3788864	3790258	+	fumarate hydratase		gene	gene3400	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16990
RY45_16995	RY45_16995		RY45_16995	3790328	3790702	-	hypothetical protein		gene	gene3401	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_16995
RY45_17000	RY45_17000		RY45_17000	3790881	3791234	+	hypothetical protein		gene	gene3402	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17000
RY45_17005	RY45_17005		RY45_17005	3791369	3792451	+	diguanylate cyclase		gene	gene3403	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17005
RY45_17010	RY45_17010		RY45_17010	3792455	3793669	-	major facilitator transporter		gene	gene3404	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17010
RY45_17015	RY45_17015		RY45_17015	3793799	3795937	-	polynucleotide phosphorylase/polyadenylase		gene	gene3405	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17015
RY45_17020	RY45_17020		RY45_17020	3796105	3796374	-	30S ribosomal protein S15		gene	gene3406	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17020
RY45_17025	RY45_17025	truB	truB	3796519	3797478	-	tRNA pseudouridine synthase B	catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs	gene	gene3407	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17025
RY45_17030	RY45_17030	rbfA	rbfA	3797480	3797914	-	ribosome-binding factor A	associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock	gene	gene3408	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17030
RY45_17035	RY45_17035		RY45_17035	3797970	3800663	-	translation initiation factor IF-2		gene	gene3409	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17035
RY45_17040	RY45_17040	nusA	nusA	3800684	3802186	-	transcription elongation factor NusA	modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination	gene	gene3410	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17040
RY45_17045	RY45_17045		RY45_17045	3802201	3802659	-	ribosome maturation protein RimP		gene	gene3411	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17045
RY45_17050	RY45_17050		RY45_17050	3802827	3802903	-	tRNA-Met		tRNA	gene3412	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17050
RY45_17055	RY45_17055		RY45_17055	3802996	3803080	-	tRNA-Leu		tRNA	gene3413	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17055
RY45_17060	RY45_17060		RY45_17060	3803088	3803414	-	preprotein translocase subunit SecG		gene	gene3414	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17060
RY45_17065	RY45_17065		RY45_17065	3803415	3804179	-	triosephosphate isomerase	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate	gene	gene3415	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17065
RY45_17070	RY45_17070	glmM	glmM	3804311	3805645	-	phosphoglucosamine mutase	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate	gene	gene3416	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17070
RY45_17075	RY45_17075	folP	folP	3805663	3806508	-	dihydropteroate synthase	catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate	gene	gene3417	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17075
RY45_17080	RY45_17080	hflB	hflB	3806571	3808520	-	ATP-dependent metalloprotease	inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins	gene	gene3418	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17080
RY45_17085	RY45_17085	rrmJ	rrmJ	3808566	3809195	-	23S rRNA methyltransferase	Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit	gene	gene3419	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17085
RY45_17090	RY45_17090		RY45_17090	3809293	3809589	+	RNA-binding protein YhbY	RNA binding protein found associated to pre-50S subunit of the ribosome%3B putative role in ribosome assembly%3B necessary for optimal growth but not cell viability	gene	gene3420	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17090
RY45_17095	RY45_17095		RY45_17095	3809694	3810287	+	hypothetical protein		gene	gene3421	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17095
RY45_17100	RY45_17100		RY45_17100	3810335	3810811	-	transcription elongation factor GreA		gene	gene3422	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17100
RY45_17105	RY45_17105	motB	motB	3810966	3811865	-	flagellar motor protein MotB	with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine%3B Vibrio parahaemolyticus protein is associated with the polar flagella	gene	gene3423	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17105
RY45_17110	RY45_17110		RY45_17110	3811874	3812632	-	flagellar motor protein PomA	Homologous to MotA in E. coli and Salmonella. With PomB forms the ion channels that couple flagellar rotation to sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.	gene	gene3424	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17110
RY45_17115	RY45_17115		RY45_17115	3812853	3813104	+	exodeoxyribonuclease VII small subunit		gene	gene3425	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17115
RY45_17120	RY45_17120		RY45_17120	3813105	3813995	+	geranyl transferase		gene	gene3426	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17120
RY45_17125	RY45_17125		RY45_17125	3814017	3815882	+	1-deoxy-D-xylulose-5-phosphate synthase	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate	gene	gene3427	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17125
RY45_17130	RY45_17130		RY45_17130	3815957	3816898	-	ABC transporter permease		gene	gene3428	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17130
RY45_17135	RY45_17135		RY45_17135	3816902	3817876	-	ABC transporter permease		gene	gene3429	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17135
RY45_17140	RY45_17140		RY45_17140	3817976	3819532	-	cytochrome C		gene	gene3430	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17140
RY45_17145	RY45_17145		RY45_17145	3819603	3821327	-	ABC transporter ATP-binding protein		gene	gene3431	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17145
RY45_17150	RY45_17150		RY45_17150	3821838	3822332	-	phosphatidylglycerophosphatase		gene	gene3432	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17150
RY45_17155	RY45_17155		RY45_17155	3822329	3823288	-	thiamine-monophosphate kinase		gene	gene3433	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17155
RY45_17160	RY45_17160	nusB	nusB	3823349	3823762	-	transcription antiterminator NusB	Regulates rRNA biosynthesis by transcriptional antitermination	gene	gene3434	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17160
RY45_17165	RY45_17165	ribH	ribH	3823777	3824247	-	6%2C7-dimethyl-8-ribityllumazine synthase	RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not	gene	gene3435	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17165
RY45_17170	RY45_17170		RY45_17170	3824445	3825656	+	membrane protein		gene	gene3436	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17170
RY45_17175	RY45_17175		RY45_17175	3825720	3826829	-	3%2C4-dihydroxy-2-butanone 4-phosphate synthase	bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein%3B functions in riboflavin synthesis	gene	gene3437	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17175
RY45_17180	RY45_17180		RY45_17180	3826971	3827624	-	riboflavin synthase subunit alpha		gene	gene3438	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17180
RY45_17185	RY45_17185	ribD	ribD	3827679	3828788	-	5-amino-6-(5-phosphoribosylamino)uracil reductase	riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil	gene	gene3439	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17185
RY45_17190	RY45_17190		RY45_17190	3828885	3829334	-	NrdR family transcriptional regulator		gene	gene3440	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17190
RY45_17195	RY45_17195		RY45_17195	3829469	3829948	-	hypothetical protein		gene	gene3441	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17195
RY45_17200	RY45_17200	glyA	glyA	3830032	3831285	-	serine hydroxymethyltransferase	catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate	gene	gene3442	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17200
RY45_17205	RY45_17205		RY45_17205	3831719	3832006	+	hypothetical protein		gene	gene3443	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17205
RY45_17210	RY45_17210		RY45_17210	3832030	3832434	+	ADP-ribosylglycohydrolase		gene	gene3444	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17210
RY45_17215	RY45_17215		RY45_17215	3832583	3833227	+	molecular chaperone TorD		gene	gene3445	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17215
RY45_17220	RY45_17220		RY45_17220	3833235	3833603	+	hypothetical protein		gene	gene3446	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17220
RY45_17225	RY45_17225		RY45_17225	3833773	3834912	+	hypothetical protein		gene	gene3447	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17225
RY45_17230	RY45_17230		RY45_17230	3834902	3835537	+	hypothetical protein		gene	gene3448	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17230
RY45_17235	RY45_17235		RY45_17235	3835643	3838093	+	diguanylate phosphodiesterase		gene	gene3449	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17235
RY45_17240	RY45_17240		RY45_17240	3838135	3838431	-	hypothetical protein		gene	gene3450	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17240
RY45_17245	RY45_17245		RY45_17245	3838600	3840546	+	acetyl-CoA synthetase	Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA	gene	gene3451	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17245
RY45_17250	RY45_17250		RY45_17250	3840938	3841387	+	3-dehydroquinate dehydratase		gene	gene3452	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17250
RY45_17255	RY45_17255		RY45_17255	3841424	3841879	+	acetyl-CoA carboxylase	composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism	gene	gene3453	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17255
RY45_17260	RY45_17260		RY45_17260	3841895	3843235	+	acetyl-CoA carboxylase	an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism	gene	gene3454	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17260
RY45_17265	RY45_17265		RY45_17265	3843363	3843626	+	hypothetical protein		gene	gene3455	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17265
RY45_17270	RY45_17270	panF	panF	3843616	3845094	+	sodium/panthothenate symporter	mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase	gene	gene3456	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17270
RY45_17275	RY45_17275		RY45_17275	3845172	3846599	+	PTS N-acetylglucosamine transporter subunit IIBC		gene	gene3457	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17275
RY45_17280	RY45_17280		RY45_17280	3846602	3847474	-	LysR family transcriptional regulator		gene	gene3458	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17280
RY45_17285	RY45_17285		RY45_17285	3847575	3848591	+	NADPH:quinone reductase		gene	gene3459	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17285
RY45_17290	RY45_17290	prmA	prmA	3849117	3849995	+	ribosomal protein L11 methyltransferase	methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype	gene	gene3460	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17290
RY45_17295	RY45_17295		RY45_17295	3850242	3851219	+	3-phosphoglycerate dehydrogenase		gene	gene3461	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17295
RY45_17300	RY45_17300		RY45_17300	3851293	3851856	+	maltose acetyltransferase		gene	gene3462	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17300
RY45_17305	RY45_17305		RY45_17305	3852325	3852873	-	nitroreductase		gene	gene3463	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17305
RY45_17310	RY45_17310	fadH	fadH	3852980	3854995	-	2%2C4-dienoyl-CoA reductase	catalyzes the formation of trans-2- enoyl-CoA from 2%2C4-dienoyl-CoA	gene	gene3464	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17310
RY45_17315	RY45_17315		RY45_17315	3855306	3857150	+	signal peptidase		gene	gene3465	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17315
RY45_17320	RY45_17320		RY45_17320	3857211	3857768	-	DNA mismatch repair protein MutT		gene	gene3466	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17320
RY45_17325	RY45_17325		RY45_17325	3857775	3858575	-	hypothetical protein		gene	gene3467	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17325
RY45_17330	RY45_17330		RY45_17330	3858773	3860203	+	glyceraldehyde-3-phosphate dehydrogenase		gene	gene3468	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17330
RY45_17335	RY45_17335		RY45_17335	3860244	3860537	+	hypothetical protein		gene	gene3469	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17335
RY45_17340	RY45_17340	ansA	ansA	3860786	3861793	-	cytoplasmic asparaginase I	converts asparagine to aspartate and ammonia	gene	gene3470	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17340
RY45_17345	RY45_17345		RY45_17345	3862308	3863507	+	sodium:glutamate symporter	is involved with the sodium-dependent uptake of glutamate	gene	gene3471	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17345
RY45_17350	RY45_17350		RY45_17350	3863690	3865561	-	chemotaxis protein		gene	gene3472	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17350
RY45_17355	RY45_17355		RY45_17355	3866032	3866913	+	peptide chain release factor 2	catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA	gene	gene3473	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17355
RY45_17360	RY45_17360	lysS	lysS	3866938	3868473	+	lysine--tRNA ligase	class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1	gene	gene3474	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17360
RY45_17365	RY45_17365		RY45_17365	3868605	3869408	-	phenazine biosynthesis protein PhzF		gene	gene3475	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17365
RY45_17370	RY45_17370		RY45_17370	3869607	3871397	+	sulfite reductase [NADPH] flavoprotein alpha-component		gene	gene3476	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17370
RY45_17375	RY45_17375		RY45_17375	3871397	3873109	+	sulfite reductase subunit beta	hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide	gene	gene3477	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17375
RY45_17380	RY45_17380		RY45_17380	3873099	3873905	+	phosphoadenosine phosphosulfate reductase	catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite	gene	gene3478	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17380
RY45_17385	RY45_17385	proX	proX	3873997	3874995	-	glycine/betaine ABC transporter substrate-binding protein	with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine	gene	gene3479	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17385
RY45_17390	RY45_17390		RY45_17390	3874992	3876143	-	glycine/betaine ABC transporter permease		gene	gene3480	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17390
RY45_17395	RY45_17395		RY45_17395	3876140	3877336	-	glycine/betaine ABC transporter ATP-binding protein	with ProWX is involved in the high-affinity uptake of glycine betaine	gene	gene3481	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17395
RY45_17400	RY45_17400		RY45_17400	3877838	3878329	-	diacylglycerol kinase		gene	gene3482	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17400
RY45_17405	RY45_17405		RY45_17405	3878354	3878821	-	membrane protein		gene	gene3483	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17405
RY45_17410	RY45_17410		RY45_17410	3878922	3879692	-	membrane protein		gene	gene3484	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17410
RY45_17415	RY45_17415		RY45_17415	3879955	3880296	-	hypothetical protein		gene	gene3485	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17415
RY45_17420	RY45_17420		RY45_17420	3880695	3881225	+	molybdopterin adenylyltransferase		gene	gene3486	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17420
RY45_17425	RY45_17425		RY45_17425	3881257	3881670	-	hypothetical protein		gene	gene3487	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17425
RY45_17430	RY45_17430		RY45_17430	3881760	3882986	-	3-oxoacyl-ACP synthase	FabB%3B beta-ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP	gene	gene3488	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17430
RY45_17435	RY45_17435	fabG	fabG	3882983	3883708	-	3-ketoacyl-ACP reductase	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis	gene	gene3489	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17435
RY45_17440	RY45_17440		RY45_17440	3883718	3884179	-	thioester dehydrase		gene	gene3490	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17440
RY45_17445	RY45_17445		RY45_17445	3884172	3885356	-	3-oxoacyl-ACP synthase	FabB%3B beta-ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP	gene	gene3491	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17445
RY45_17450	RY45_17450		RY45_17450	3885353	3885910	-	hypothetical protein		gene	gene3492	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17450
RY45_17455	RY45_17455		RY45_17455	3885907	3888267	-	membrane protein		gene	gene3493	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17455
RY45_17460	RY45_17460		RY45_17460	3888318	3888932	-	hypothetical protein		gene	gene3494	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17460
RY45_17465	RY45_17465		RY45_17465	3888929	3889369	-	4-hydroxybenzoyl-CoA thioesterase		gene	gene3495	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17465
RY45_17470	RY45_17470		RY45_17470	3889366	3890928	-	histidine ammonia-lyase		gene	gene3496	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17470
RY45_17475	RY45_17475		RY45_17475	3890915	3892618	-	acyltransferase		gene	gene3497	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17475
RY45_17480	RY45_17480		RY45_17480	3892615	3892986	-	hydroxymyristoyl-ACP dehydratase		gene	gene3498	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17480
RY45_17485	RY45_17485		RY45_17485	3892970	3894340	-	acyl-CoA synthetase		gene	gene3499	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17485
RY45_17490	RY45_17490		RY45_17490	3894337	3894975	-	DNA gyrase subunit B		gene	gene3500	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17490
RY45_17495	RY45_17495		RY45_17495	3894944	3895192	-	acyl carrier protein	carries the fatty acid chain in fatty acid biosynthesis	gene	gene3501	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17495
RY45_17500	RY45_17500		RY45_17500	3895196	3895462	-	acyl carrier protein		gene	gene3502	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17500
RY45_17505	RY45_17505		RY45_17505	3895480	3896238	-	acyl-phosphate glycerol 3-phosphate acyltransferase		gene	gene3503	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17505
RY45_17510	RY45_17510		RY45_17510	3896223	3896936	-	beta-ketoacyl synthase		gene	gene3504	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17510
RY45_17515	RY45_17515		RY45_17515	3897113	3897577	+	lipoprotein		gene	gene3505	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17515
RY45_17520	RY45_17520		RY45_17520	3897596	3898672	+	methyltransferase		gene	gene3506	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17520
RY45_17525	RY45_17525		RY45_17525	3898720	3898935	+	hypothetical protein		gene	gene3507	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17525
RY45_17530	RY45_17530		RY45_17530	3898981	3899736	-	DNA/RNA endonuclease G		gene	gene3508	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17530
RY45_17535	RY45_17535		RY45_17535	3899979	3900956	-	cytochrome C biogenesis protein CcsA		gene	gene3509	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17535
RY45_17540	RY45_17540		RY45_17540	3901406	3902131	+	carbonic anhydrase		gene	gene3510	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17540
RY45_17545	RY45_17545		RY45_17545	3902207	3903115	-	pseudouridine-5'-phosphate glycosidase		gene	gene3511	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17545
RY45_17550	RY45_17550		RY45_17550	3903109	3904200	-	kinase		gene	gene3512	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17550
RY45_17555	RY45_17555		RY45_17555	3904346	3904705	-	nitrite reductase		gene	gene3513	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17555
RY45_17560	RY45_17560		RY45_17560	3904855	3907356	-	nitrite reductase		gene	gene3514	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17560
RY45_17565	RY45_17565		RY45_17565	3907463	3908284	-	nitrate ABC transporter ATP-binding protein		gene	gene3515	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17565
RY45_17570	RY45_17570		RY45_17570	3908389	3909333	-	nitrate ABC transporter permease		gene	gene3516	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17570
RY45_17575	RY45_17575		RY45_17575	3909348	3910679	-	nitrate ABC transporter substrate-binding protein		gene	gene3517	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17575
RY45_17580	RY45_17580		RY45_17580	3911149	3911733	-	histidine kinase		gene	gene3518	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17580
RY45_17585	RY45_17585		RY45_17585	3911873	3912631	-	uroporphyrin-III methyltransferase		gene	gene3519	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17585
RY45_17590	RY45_17590		RY45_17590	3912654	3915296	-	nitrate reductase		gene	gene3520	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17590
RY45_17595	RY45_17595		RY45_17595	3915600	3916106	+	23S rRNA methyltransferase		gene	gene3521	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17595
RY45_17600	RY45_17600		RY45_17600	3916372	3917112	-	hypothetical protein		gene	gene3522	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17600
RY45_17605	RY45_17605		RY45_17605	3917299	3917730	+	universal stress protein		gene	gene3523	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17605
RY45_17610	RY45_17610		RY45_17610	3917801	3918436	-	peptidase		gene	gene3524	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17610
RY45_17615	RY45_17615		RY45_17615	3918590	3919843	-	gamma-glutamyl phosphate reductase		gene	gene3525	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17615
RY45_17620	RY45_17620		RY45_17620	3919937	3921040	-	gamma-glutamyl kinase		gene	gene3526	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17620
RY45_17625	RY45_17625		RY45_17625	3921201	3921593	-	sigma factor-binding protein Crl		gene	gene3527	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17625
RY45_17630	RY45_17630		RY45_17630	3921655	3922923	-	fermentation/respiration switch protein		gene	gene3528	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17630
RY45_17635	RY45_17635		RY45_17635	3923043	3923510	-	xanthine-guanine phosphoribosyltransferase	catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively	gene	gene3529	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17635
RY45_17640	RY45_17640		RY45_17640	3924428	3925879	+	aminoacyl-histidine dipeptidase	catalyzes the hydrolysis of Xaa-His dipeptides	gene	gene3530	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17640
RY45_17645	RY45_17645		RY45_17645	3926561	3927562	-	peptide ABC transporter substrate-binding protein		gene	gene3531	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17645
RY45_17650	RY45_17650		RY45_17650	3927559	3928617	-	peptide ABC transporter ATP-binding protein		gene	gene3532	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17650
RY45_17655	RY45_17655		RY45_17655	3928643	3930460	-	peptide ABC transporter substrate-binding protein		gene	gene3533	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17655
RY45_17660	RY45_17660		RY45_17660	3930542	3931579	-	peptide ABC transporter permease		gene	gene3534	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17660
RY45_17665	RY45_17665		RY45_17665	3931582	3932607	-	hypothetical protein		gene	gene3535	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17665
RY45_17670	RY45_17670		RY45_17670	3933346	3935901	+	TonB-dependent receptor		gene	gene3536	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17670
RY45_17675	RY45_17675		RY45_17675	3936012	3936776	+	energy transducer TonB		gene	gene3537	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17675
RY45_17680	RY45_17680		RY45_17680	3936773	3938146	+	biopolymer transporter ExbB		gene	gene3538	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17680
RY45_17685	RY45_17685		RY45_17685	3938157	3938684	+	biopolymer transporter ExbB		gene	gene3539	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17685
RY45_17690	RY45_17690		RY45_17690	3938752	3939159	+	biopolymer transporter ExbD		gene	gene3540	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17690
RY45_17695	RY45_17695		RY45_17695	3939176	3939811	+	sugar ABC transporter substrate-binding protein		gene	gene3541	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17695
RY45_17700	RY45_17700		RY45_17700	3939823	3941058	+	hypothetical protein		gene	gene3542	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17700
RY45_17705	RY45_17705	hypothetical protein	hypothetical protein	3941335	3944121	-		disrupted	pseudogene	gene3543	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17705
RY45_17710	RY45_17710		RY45_17710	3944873	3947017	+	nuclease		gene	gene3544	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17710
RY45_17715	RY45_17715		RY45_17715	3947132	3948094	+	transposase		gene	gene3545	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17715
RY45_17720	RY45_17720		RY45_17720	3948190	3948265	-	tRNA-Ala		tRNA	gene3546	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17720
RY45_17725	RY45_17725		RY45_17725	3948300	3948375	-	tRNA-Ala		tRNA	gene3547	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17725
RY45_17730	RY45_17730		RY45_17730	3948424	3948499	-	tRNA-Ala		tRNA	gene3548	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17730
RY45_17735	RY45_17735		RY45_17735	3948563	3948638	-	tRNA-Ala		tRNA	gene3549	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17735
RY45_17740	RY45_17740		RY45_17740	3948667	3948742	-	tRNA-Ala		tRNA	gene3550	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17740
RY45_17745	RY45_17745		RY45_17745	3948980	3949063	-	glutamyl-tRNA synthetase		gene	gene3551	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17745
RY45_17750	RY45_17750		RY45_17750	3949128	3950543	-	glutamyl-tRNA synthetase		gene	gene3552	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17750
RY45_17755	RY45_17755		RY45_17755	3950804	3952906	+	chemotaxis protein		gene	gene3553	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17755
RY45_17760	RY45_17760		RY45_17760	3953005	3953673	+	opacity-associated protein A		gene	gene3554	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17760
RY45_17765	RY45_17765		RY45_17765	3953946	3954155	+	cold-shock protein		gene	gene3555	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17765
RY45_17770	RY45_17770		RY45_17770	3954467	3954542	-	tRNA-Gly		tRNA	gene3556	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17770
RY45_17775	RY45_17775		RY45_17775	3954567	3954642	-	tRNA-Gly		tRNA	gene3557	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17775
RY45_17780	RY45_17780		RY45_17780	3954667	3954742	-	tRNA-Gly		tRNA	gene3558	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17780
RY45_17785	RY45_17785		RY45_17785	3954776	3954851	-	tRNA-Gly		tRNA	gene3559	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17785
RY45_17790	RY45_17790		RY45_17790	3954877	3954952	-	tRNA-Gly		tRNA	gene3560	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17790
RY45_17795	RY45_17795		RY45_17795	3955130	3955675	-	oligoribonuclease		gene	gene3561	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17795
RY45_17800	RY45_17800		RY45_17800	3955767	3956801	+	GTPase RsgA	EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity	gene	gene3562	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17800
RY45_17805	RY45_17805		RY45_17805	3956830	3957702	+	phosphatidylserine decarboxylase		gene	gene3563	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17805
RY45_17810	RY45_17810		RY45_17810	3957699	3957950	+	hypothetical protein		gene	gene3564	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17810
RY45_17815	RY45_17815		RY45_17815	3957955	3958206	+	hypothetical protein		gene	gene3565	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17815
RY45_17820	RY45_17820		RY45_17820	3958209	3958607	+	hypothetical protein		gene	gene3566	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17820
RY45_17825	RY45_17825		RY45_17825	3958720	3959289	-	membrane protein		gene	gene3567	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17825
RY45_17830	RY45_17830		RY45_17830	3959332	3959661	-	alkylhydroperoxidase		gene	gene3568	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17830
RY45_17835	RY45_17835		RY45_17835	3959775	3960692	+	AraC family transcriptional regulator		gene	gene3569	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17835
RY45_17840	RY45_17840		RY45_17840	3960753	3961247	-	hypothetical protein		gene	gene3570	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17840
RY45_17845	RY45_17845		RY45_17845	3961419	3963392	+	diguanylate phosphodiesterase		gene	gene3571	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17845
RY45_17850	RY45_17850		RY45_17850	3963460	3963795	-	regulator		gene	gene3572	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17850
RY45_17855	RY45_17855		RY45_17855	3964230	3966506	+	protease		gene	gene3573	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17855
RY45_17860	RY45_17860		RY45_17860	3966692	3966767	+	tRNA-Phe		tRNA	gene3574	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17860
RY45_17865	RY45_17865		RY45_17865	3966772	3966847	+	tRNA-Asn		tRNA	gene3575	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17865
RY45_17870	RY45_17870		RY45_17870	3967251	3968528	+	alpha/beta hydrolase		gene	gene3576	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17870
RY45_17875	RY45_17875		RY45_17875	3968628	3972188	+	ABC transporter ATP-binding protein		gene	gene3577	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17875
RY45_17880	RY45_17880		RY45_17880	3972244	3972453	-	hypothetical protein		gene	gene3578	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17880
RY45_17885	RY45_17885		RY45_17885	3972568	3973743	-	peptidase S8		gene	gene3579	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17885
RY45_17890	RY45_17890		RY45_17890	3973863	3975155	-	thiosulfate sulfurtransferase		gene	gene3580	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17890
RY45_17895	RY45_17895		RY45_17895	3975184	3976104	-	glutaminase	catalyzes the formation of glutamate from glutamine	gene	gene3581	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17895
RY45_17900	RY45_17900		RY45_17900	3976229	3976561	-	hypothetical protein		gene	gene3582	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17900
RY45_17905	RY45_17905		RY45_17905	3976576	3977289	-	tRNA (guanine-N7)-methyltransferase		gene	gene3583	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17905
RY45_17910	RY45_17910		RY45_17910	3977638	3978705	+	peptidase M28		gene	gene3584	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17910
RY45_17915	RY45_17915		RY45_17915	3978888	3980069	+	aspartate aminotransferase		gene	gene3585	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17915
RY45_17920	RY45_17920		RY45_17920	3980136	3981668	-	diguanylate phosphodiesterase		gene	gene3586	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17920
RY45_17925	RY45_17925		RY45_17925	3981971	3982876	+	epimerase		gene	gene3587	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17925
RY45_17930	RY45_17930		RY45_17930	3982970	3985417	-	cell division protein FtsX		gene	gene3588	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17930
RY45_17935	RY45_17935		RY45_17935	3985598	3986323	-	ABC transporter		gene	gene3589	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17935
RY45_17940	RY45_17940		RY45_17940	3986322	3986921	+	acyl-CoA thioesterase		gene	gene3590	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17940
RY45_17945	RY45_17945		RY45_17945	3987005	3987949	-	chemotaxis protein CheW		gene	gene3591	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17945
RY45_17950	RY45_17950	RTX toxin	RTX toxin	3988245	3995145	-		disrupted	pseudogene	gene3592	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17950
RY45_17955	RY45_17955		RY45_17955	3995374	3997035	-	transporter		gene	gene3593	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17955
RY45_17960	RY45_17960		RY45_17960	3997154	3997789	-	hemolysin		gene	gene3594	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17960
RY45_17965	RY45_17965		RY45_17965	3998014	3999519	+	decarboxylase		gene	gene3595	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17965
RY45_17970	RY45_17970		RY45_17970	3999624	4000175	+	intracellular septation protein A	Involved in cell division%3B probably involved in intracellular septation	gene	gene3596	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17970
RY45_17975	RY45_17975		RY45_17975	4000201	4000497	+	BolA family transcriptional regulator		gene	gene3597	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17975
RY45_17980	RY45_17980		RY45_17980	4000578	4001348	-	adenosine-3'(2')%2C5'-bisphosphate nucleotidase	catalyzes the formation of AMP from adenosine-3'%2C5'-bisphosphate	gene	gene3598	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17980
RY45_17985	RY45_17985		RY45_17985	4001516	4001836	+	competence protein ComEA		gene	gene3599	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17985
RY45_17990	RY45_17990		RY45_17990	4001931	4002842	+	UTP--glucose-1-phosphate uridylyltransferase	together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose	gene	gene3600	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17990
RY45_17995	RY45_17995		RY45_17995	4003056	4004453	+	DeoR faimly transcriptional regulator		gene	gene3601	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_17995
RY45_18000	RY45_18000		RY45_18000	4004528	4005499	-	chemotaxis protein CheY		gene	gene3602	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18000
RY45_18005	RY45_18005		RY45_18005	4005839	4006516	+	hypothetical protein		gene	gene3603	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18005
RY45_18010	RY45_18010		RY45_18010	4006586	4007440	+	ATPase AAA		gene	gene3604	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18010
RY45_18015	RY45_18015		RY45_18015	4007569	4008204	+	hypothetical protein		gene	gene3605	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18015
RY45_18020	RY45_18020		RY45_18020	4008314	4009510	-	ABC transporter		gene	gene3606	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18020
RY45_18025	RY45_18025		RY45_18025	4009614	4010750	-	multidrug ABC transporter permease		gene	gene3607	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18025
RY45_18030	RY45_18030		RY45_18030	4010750	4011727	-	membrane protein		gene	gene3608	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18030
RY45_18035	RY45_18035		RY45_18035	4011828	4013234	-	membrane protein		gene	gene3609	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18035
RY45_18040	RY45_18040		RY45_18040	4013525	4014490	+	tRNA-dihydrouridine synthase B		gene	gene3610	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18040
RY45_18045	RY45_18045		RY45_18045	4014516	4014812	+	Fis family transcriptional regulator		gene	gene3611	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18045
RY45_18050	RY45_18050		RY45_18050	4014895	4015527	-	lysine transporter LysE		gene	gene3612	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18050
RY45_18055	RY45_18055		RY45_18055	4015858	4015972	-	5S ribosomal RNA		rRNA	gene3613	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18055
RY45_18060	RY45_18060		RY45_18060	4016035	4018948	-	23S ribosomal RNA		rRNA	gene3614	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18060
RY45_18065	RY45_18065		RY45_18065	4019179	4019254	-	tRNA-Glu		tRNA	gene3615	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18065
RY45_18070	RY45_18070		RY45_18070	4019450	4021007	-	16S ribosomal RNA		rRNA	gene3616	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18070
RY45_18075	RY45_18075		RY45_18075	4021490	4021840	-	iron-sulfur cluster insertion protein ErpA	essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors	gene	gene3617	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18075
RY45_18080	RY45_18080		RY45_18080	4021931	4022626	-	hypothetical protein		gene	gene3618	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18080
RY45_18085	RY45_18085		RY45_18085	4022713	4024107	-	H(+)/Cl(-) exchange transporter ClcA		gene	gene3619	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18085
RY45_18090	RY45_18090		RY45_18090	4024330	4025616	+	glutamate-1-semialdehyde aminotransferase	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway	gene	gene3620	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18090
RY45_18095	RY45_18095		RY45_18095	4025826	4026641	+	hypothetical protein		gene	gene3621	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18095
RY45_18100	RY45_18100		RY45_18100	4026702	4027604	-	permease		gene	gene3622	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18100
RY45_18105	RY45_18105		RY45_18105	4027861	4028583	-	membrane protein		gene	gene3623	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18105
RY45_18110	RY45_18110		RY45_18110	4028758	4029285	+	hypothetical protein		gene	gene3624	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18110
RY45_18115	RY45_18115		RY45_18115	4029361	4030941	-	phosphodiesterase		gene	gene3625	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18115
RY45_18120	RY45_18120		RY45_18120	4031055	4031936	-	LysR family transcriptional regulator		gene	gene3626	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18120
RY45_18125	RY45_18125		RY45_18125	4032093	4032608	+	multidrug transporter		gene	gene3627	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18125
RY45_18130	RY45_18130		RY45_18130	4032596	4032916	+	ligand-binding protein SH3		gene	gene3628	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18130
RY45_18135	RY45_18135		RY45_18135	4033015	4033416	-	hypothetical protein		gene	gene3629	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18135
RY45_18140	RY45_18140		RY45_18140	4033459	4035780	-	peptidase		gene	gene3630	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18140
RY45_18145	RY45_18145		RY45_18145	4035854	4038301	-	ATP-dependent helicase		gene	gene3631	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18145
RY45_18150	RY45_18150	2'-5' RNA ligase	2'-5' RNA ligase	4038458	4038973	+		disrupted	pseudogene	gene3632	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18150
RY45_18155	RY45_18155		RY45_18155	4039030	4039773	+	transcriptional regulator		gene	gene3633	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18155
RY45_18160	RY45_18160	dksA	dksA	4039893	4040342	+	RNA polymerase-binding transcription factor		gene	gene3634	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18160
RY45_18165	RY45_18165		RY45_18165	4040456	4041373	+	glutamyl-tRNA synthetase		gene	gene3635	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18165
RY45_18170	RY45_18170	pcnB	pcnB	4041598	4043097	+	poly(A) polymerase I	Polymerase that creates the 3' poly(A) tail found in some mRNA's	gene	gene3636	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18170
RY45_18175	RY45_18175		RY45_18175	4043109	4043618	+	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	catalyzes the formation of 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine and ATP	gene	gene3637	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18175
RY45_18180	RY45_18180	panB	panB	4043615	4044409	+	3-methyl-2-oxobutanoate hydroxymethyltransferase	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate	gene	gene3638	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18180
RY45_18185	RY45_18185	panC	panC	4044597	4045454	+	pantoate--beta-alanine ligase	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine	gene	gene3639	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18185
RY45_18190	RY45_18190		RY45_18190	4045519	4045962	-	sulfurtransferase		gene	gene3640	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18190
RY45_18195	RY45_18195		RY45_18195	4045964	4046386	-	methylamine utilization protein		gene	gene3641	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18195
RY45_18200	RY45_18200		RY45_18200	4046506	4046913	-	hypothetical protein		gene	gene3642	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18200
RY45_18205	RY45_18205		RY45_18205	4047156	4049267	+	hypothetical protein		gene	gene3643	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18205
RY45_18210	RY45_18210		RY45_18210	4049341	4049598	-	hypothetical protein		gene	gene3644	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18210
RY45_18215	RY45_18215		RY45_18215	4049595	4050377	-	hypothetical protein		gene	gene3645	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18215
RY45_18220	RY45_18220		RY45_18220	4050387	4051538	-	hypothetical protein		gene	gene3646	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18220
RY45_18225	RY45_18225		RY45_18225	4051772	4052545	-	ABC transporter permease		gene	gene3647	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18225
RY45_18230	RY45_18230		RY45_18230	4052542	4053459	-	ABC transporter		gene	gene3648	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18230
RY45_18235	RY45_18235		RY45_18235	4053571	4054101	-	hypoxanthine phosphoribosyltransferase	catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate	gene	gene3649	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18235
RY45_18240	RY45_18240		RY45_18240	4054302	4054916	+	TetR family transcriptional regulator		gene	gene3650	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18240
RY45_18245	RY45_18245		RY45_18245	4054991	4055602	-	aromatic acid decarboxylase		gene	gene3651	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18245
RY45_18250	RY45_18250		RY45_18250	4055599	4056969	-	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase	ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan	gene	gene3652	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18250
RY45_18255	RY45_18255		RY45_18255	4057148	4057678	+	inorganic pyrophosphatase	catalyzes the hydrolysis of pyrophosphate to phosphate	gene	gene3653	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18255
RY45_18260	RY45_18260		RY45_18260	4057704	4058051	-	hypothetical protein		gene	gene3654	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18260
RY45_18265	RY45_18265		RY45_18265	4058191	4059069	+	hypothetical protein		gene	gene3655	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18265
RY45_18270	RY45_18270		RY45_18270	4059327	4059869	+	hypothetical protein		gene	gene3656	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18270
RY45_18275	RY45_18275		RY45_18275	4059914	4060204	+	hypothetical protein		gene	gene3657	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18275
RY45_18280	RY45_18280		RY45_18280	4060240	4060836	+	hypothetical protein		gene	gene3658	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18280
RY45_18285	RY45_18285		RY45_18285	4060841	4061530	+	methionine ABC transporter ATP-binding protein		gene	gene3659	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18285
RY45_18290	RY45_18290		RY45_18290	4061607	4062854	+	peptide ABC transporter permease		gene	gene3660	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18290
RY45_18295	RY45_18295		RY45_18295	4062884	4063363	+	hypothetical protein		gene	gene3661	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18295
RY45_18300	RY45_18300		RY45_18300	4063503	4064369	+	hypothetical protein		gene	gene3662	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18300
RY45_18305	RY45_18305		RY45_18305	4064633	4066261	+	chemotaxis protein		gene	gene3663	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18305
RY45_18310	RY45_18310		RY45_18310	4067318	4068169	+	hypothetical protein		gene	gene3664	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18310
RY45_18315	RY45_18315		RY45_18315	4070003	4070596	-	adenylylsulfate kinase		gene	gene3665	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18315
RY45_18320	RY45_18320		RY45_18320	4070753	4072477	-	potassium transporter TrkA		gene	gene3666	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18320
RY45_18325	RY45_18325		RY45_18325	4072482	4073909	-	sulfate adenylyltransferase		gene	gene3667	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18325
RY45_18330	RY45_18330		RY45_18330	4073934	4074842	-	sulfate adenylyltransferase subunit 2	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP	gene	gene3668	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18330
RY45_18335	RY45_18335		RY45_18335	4074951	4076363	-	sirohydrochlorin ferrochelatase		gene	gene3669	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18335
RY45_18340	RY45_18340		RY45_18340	4076561	4077481	+	protease		gene	gene3670	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18340
RY45_18345	RY45_18345		RY45_18345	4077478	4077933	+	regulatory protein		gene	gene3671	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18345
RY45_18350	RY45_18350		RY45_18350	4078017	4078427	-	signal transduction protein		gene	gene3672	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18350
RY45_18355	RY45_18355		RY45_18355	4078581	4080491	+	ABC transporter ATP-binding protein		gene	gene3673	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18355
RY45_18360	RY45_18360		RY45_18360	4080484	4080945	+	hypothetical protein		gene	gene3674	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18360
RY45_18365	RY45_18365		RY45_18365	4080939	4081793	+	DNA uptake protein		gene	gene3675	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18365
RY45_18370	RY45_18370		RY45_18370	4082508	4082837	+	hypothetical protein		gene	gene3676	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18370
RY45_18375	RY45_18375		RY45_18375	4082840	4083853	+	hypothetical protein		gene	gene3677	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18375
RY45_18380	RY45_18380		RY45_18380	4084256	4084624	+	membrane protein		gene	gene3678	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18380
RY45_18385	RY45_18385		RY45_18385	4084961	4085389	+	glyoxalase		gene	gene3679	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18385
RY45_18390	RY45_18390		RY45_18390	4089410	4089841	+	MerR family transcriptional regulator		gene	gene3680	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18390
RY45_18395	RY45_18395		RY45_18395	4089896	4090498	+	NAD(P)H dehydrogenase		gene	gene3681	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18395
RY45_18400	RY45_18400		RY45_18400	4090544	4092061	-	proline:sodium symporter PutP	involved in the sodium dependent uptake of proline	gene	gene3682	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18400
RY45_18405	RY45_18405		RY45_18405	4092351	4093277	-	L%2CD-transpeptidase	catalyzes th removal of D-alanine and attachment of the murein lipoprotein to the peptidoglycan tetrapeptide chain	gene	gene3683	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18405
RY45_18410	RY45_18410		RY45_18410	4093464	4094705	-	miniconductance mechanosensitive channel		gene	gene3684	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18410
RY45_18415	RY45_18415		RY45_18415	4094839	4096038	-	acetate kinase	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate	gene	gene3685	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18415
RY45_18420	RY45_18420		RY45_18420	4096213	4096683	-	hypothetical protein		gene	gene3686	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18420
RY45_18425	RY45_18425		RY45_18425	4096994	4098100	-	acyltransferase		gene	gene3687	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18425
RY45_18430	RY45_18430		RY45_18430	4098261	4099910	-	multicopper oxidase	laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification	gene	gene3688	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18430
RY45_18435	RY45_18435		RY45_18435	4100036	4100728	-	aspartate racemase		gene	gene3689	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18435
RY45_18440	RY45_18440		RY45_18440	4100873	4101463	-	lysine transporter LysE		gene	gene3690	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18440
RY45_18445	RY45_18445		RY45_18445	4101588	4102184	-	lysine transporter LysE		gene	gene3691	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18445
RY45_18450	RY45_18450		RY45_18450	4102302	4103678	+	GntR family transcriptional regulator		gene	gene3692	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18450
RY45_18455	RY45_18455		RY45_18455	4103720	4104184	+	hypothetical protein		gene	gene3693	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18455
RY45_18460	RY45_18460		RY45_18460	4104278	4106323	+	hypothetical protein		gene	gene3694	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18460
RY45_18465	RY45_18465		RY45_18465	4106293	4107018	+	hypothetical protein		gene	gene3695	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18465
RY45_18470	RY45_18470		RY45_18470	4107129	4108754	+	hypothetical protein		gene	gene3696	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18470
RY45_18475	RY45_18475		RY45_18475	4108778	4110091	-	transporter		gene	gene3697	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18475
RY45_18480	RY45_18480		RY45_18480	4110546	4111262	+	hypothetical protein		gene	gene3698	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18480
RY45_18485	RY45_18485		RY45_18485	4111263	4112576	-	transporter		gene	gene3699	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18485
RY45_18490	RY45_18490		RY45_18490	4112791	4113630	-	2OG-Fe(II) oxygenase		gene	gene3700	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18490
RY45_18495	RY45_18495		RY45_18495	4113839	4114402	+	DNA repair protein		gene	gene3701	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18495
RY45_18500	RY45_18500		RY45_18500	4114453	4115274	-	haloacid dehalogenase		gene	gene3702	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18500
RY45_18505	RY45_18505		RY45_18505	4115547	4116788	-	major facilitator transporter		gene	gene3703	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18505
RY45_18510	RY45_18510		RY45_18510	4116955	4117575	+	transcriptional regulator		gene	gene3704	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18510
RY45_18515	RY45_18515		RY45_18515	4117884	4118360	+	AsnC family transcriptional regulator		gene	gene3705	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18515
RY45_18520	RY45_18520		RY45_18520	4118437	4118754	-	hypothetical protein		gene	gene3706	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18520
RY45_18525	RY45_18525		RY45_18525	4118900	4119127	-	hypothetical protein		gene	gene3707	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18525
RY45_18530	RY45_18530		RY45_18530	4119163	4119588	-	MarR family transcriptional regulator		gene	gene3708	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18530
RY45_18535	RY45_18535		RY45_18535	4119731	4120177	+	organic hydroperoxide reductase		gene	gene3709	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18535
RY45_18540	RY45_18540		RY45_18540	4120260	4121264	+	NADP-dependent oxidoreductase		gene	gene3710	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18540
RY45_18545	RY45_18545		RY45_18545	4121372	4121815	+	ADP-ribose pyrophosphatase		gene	gene3711	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18545
RY45_18550	RY45_18550	chorismate-binding protein	chorismate-binding protein	4122052	4123200	+		disrupted	pseudogene	gene3712	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18550
RY45_18555	RY45_18555		RY45_18555	4123272	4123646	-	methionine sulfoxide reductase B		gene	gene3713	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18555
RY45_18560	RY45_18560		RY45_18560	4123703	4125844	-	glycogen debranching protein		gene	gene3714	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18560
RY45_18565	RY45_18565		RY45_18565	4125844	4128021	-	glycogen branching protein	catalyzes the transfer of a segment of a 1%2C4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain	gene	gene3715	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18565
RY45_18570	RY45_18570		RY45_18570	4128104	4130293	-	4-alpha-glucanotransferase		gene	gene3716	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18570
RY45_18575	RY45_18575		RY45_18575	4130640	4131635	+	glyceraldehyde-3-phosphate dehydrogenase		gene	gene3717	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18575
RY45_18580	RY45_18580		RY45_18580	4131751	4132617	+	aldose epimerase		gene	gene3718	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18580
RY45_18585	RY45_18585		RY45_18585	4132687	4133760	-	quinolinate synthetase	3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate	gene	gene3719	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18585
RY45_18590	RY45_18590		RY45_18590	4133901	4136006	+	chemotaxis protein		gene	gene3720	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18590
RY45_18595	RY45_18595		RY45_18595	4136056	4136131	-	tRNA-Val		tRNA	gene3721	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18595
RY45_18600	RY45_18600		RY45_18600	4136148	4136223	-	tRNA-Lys		tRNA	gene3722	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18600
RY45_18605	RY45_18605		RY45_18605	4136247	4136322	-	tRNA-Val		tRNA	gene3723	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18605
RY45_18610	RY45_18610		RY45_18610	4136344	4136419	-	tRNA-Lys		tRNA	gene3724	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18610
RY45_18615	RY45_18615		RY45_18615	4136468	4136543	-	tRNA-Val		tRNA	gene3725	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18615
RY45_18620	RY45_18620		RY45_18620	4136575	4136650	-	tRNA-Lys		tRNA	gene3726	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18620
RY45_18625	RY45_18625		RY45_18625	4136825	4137634	-	tol-pal system protein		gene	gene3727	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18625
RY45_18630	RY45_18630		RY45_18630	4137793	4138317	-	lipoprotein		gene	gene3728	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18630
RY45_18635	RY45_18635		RY45_18635	4138367	4139692	-	translocation protein TolB		gene	gene3729	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18635
RY45_18640	RY45_18640		RY45_18640	4139787	4140950	-	cell envelope protein TolA		gene	gene3730	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18640
RY45_18645	RY45_18645		RY45_18645	4140956	4141402	-	biopolymer transporter ExbD		gene	gene3731	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18645
RY45_18650	RY45_18650		RY45_18650	4141402	4142091	-	colicin uptake protein TolQ	membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins	gene	gene3732	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18650
RY45_18655	RY45_18655		RY45_18655	4142081	4142488	-	acyl-CoA thioesterase	catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components	gene	gene3733	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18655
RY45_18660	RY45_18660		RY45_18660	4142594	4142905	-	hypothetical protein		gene	gene3734	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18660
RY45_18665	RY45_18665		RY45_18665	4142892	4143008	-	membrane protein		gene	gene3735	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18665
RY45_18670	RY45_18670		RY45_18670	4143023	4144159	-	cytochrome d ubiquinol oxidase subunit 2		gene	gene3736	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18670
RY45_18675	RY45_18675		RY45_18675	4144172	4145728	-	cytochrome d terminal oxidase subunit 1	part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone	gene	gene3737	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18675
RY45_18680	RY45_18680	ruvB	ruvB	4146665	4147675	-	ATP-dependent DNA helicase RuvB	promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration	gene	gene3738	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18680
RY45_18685	RY45_18685	ruvA	ruvA	4147684	4148298	-	ATP-dependent DNA helicase RuvA	plays an essential role in ATP-dependent branch migration of the Holliday junction	gene	gene3739	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18685
RY45_18690	RY45_18690		RY45_18690	4148537	4150546	+	chemotaxis protein		gene	gene3740	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18690
RY45_18695	RY45_18695		RY45_18695	4150682	4152406	+	proline--tRNA ligase	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)	gene	gene3741	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18695
RY45_18700	RY45_18700		RY45_18700	4152493	4153170	-	short-chain dehydrogenase		gene	gene3742	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18700
RY45_18705	RY45_18705		RY45_18705	4153235	4153864	-	hypothetical protein		gene	gene3743	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18705
RY45_18710	RY45_18710		RY45_18710	4153960	4154400	-	transporter		gene	gene3744	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18710
RY45_18715	RY45_18715		RY45_18715	4154490	4155239	+	enoyl-CoA hydratase		gene	gene3745	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18715
RY45_18720	RY45_18720		RY45_18720	4155243	4155671	-	hypothetical protein		gene	gene3746	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18720
RY45_18725	RY45_18725		RY45_18725	4155962	4156627	+	antibiotic acetyltransferase		gene	gene3747	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18725
RY45_18730	RY45_18730		RY45_18730	4156679	4157386	-	chromosome partitioning protein ParB		gene	gene3748	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18730
RY45_18735	RY45_18735		RY45_18735	4157559	4159163	+	peptide ABC transporter substrate-binding protein	is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate	gene	gene3749	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18735
RY45_18740	RY45_18740		RY45_18740	4159276	4159587	+	hypothetical protein		gene	gene3750	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18740
RY45_18745	RY45_18745		RY45_18745	4159636	4160055	-	hypothetical protein		gene	gene3751	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18745
RY45_18750	RY45_18750		RY45_18750	4160074	4160373	-	hypothetical protein		gene	gene3752	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18750
RY45_18755	RY45_18755		RY45_18755	4160373	4160924	-	membrane protein		gene	gene3753	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18755
RY45_18760	RY45_18760		RY45_18760	4160965	4161789	-	pyrroline-5-carboxylate reductase		gene	gene3754	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18760
RY45_18765	RY45_18765		RY45_18765	4161848	4162549	-	hypothetical protein		gene	gene3755	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18765
RY45_18770	RY45_18770		RY45_18770	4162589	4163623	+	twitching motility protein PilT		gene	gene3756	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18770
RY45_18775	RY45_18775		RY45_18775	4163652	4164761	+	twitching motility protein PilT		gene	gene3757	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18775
RY45_18780	RY45_18780		RY45_18780	4164793	4165566	+	hypothetical protein		gene	gene3758	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18780
RY45_18785	RY45_18785		RY45_18785	4165743	4166966	-	RNA helicase		gene	gene3759	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18785
RY45_18790	RY45_18790		RY45_18790	4167095	4167805	+	tRNA (adenine-N6)-methyltransferase		gene	gene3760	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18790
RY45_18795	RY45_18795		RY45_18795	4167996	4169303	+	branched-chain amino acid transporter		gene	gene3761	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18795
RY45_18800	RY45_18800		RY45_18800	4169652	4170974	+	branched-chain amino acid transporter		gene	gene3762	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18800
RY45_18805	RY45_18805		RY45_18805	4171045	4171275	-	hypothetical protein		gene	gene3763	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18805
RY45_18810	RY45_18810		RY45_18810	4171280	4171741	-	chemotaxis protein CheX		gene	gene3764	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18810
RY45_18815	RY45_18815		RY45_18815	4171740	4172171	+	hypothetical protein		gene	gene3765	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18815
RY45_18820	RY45_18820		RY45_18820	4172328	4173314	+	tRNA-dihydrouridine synthase A		gene	gene3766	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18820
RY45_18825	RY45_18825		RY45_18825	4173542	4173967	-	hypothetical protein		gene	gene3767	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18825
RY45_18830	RY45_18830		RY45_18830	4174069	4174341	-	DNA-binding protein		gene	gene3768	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18830
RY45_18835	RY45_18835		RY45_18835	4174682	4175164	+	anti-RNA polymerase sigma 70 factor		gene	gene3769	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18835
RY45_18840	RY45_18840		RY45_18840	4175266	4175646	+	pilus assembly protein		gene	gene3770	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18840
RY45_18845	RY45_18845		RY45_18845	4175718	4177082	-	DNA repair protein RadA	Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents	gene	gene3771	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18845
RY45_18850	RY45_18850		RY45_18850	4177183	4179561	+	pilus assembly protein TapZ		gene	gene3772	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18850
RY45_18855	RY45_18855		RY45_18855	4179688	4180593	-	alpha/beta hydrolase		gene	gene3773	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18855
RY45_18860	RY45_18860		RY45_18860	4180643	4181653	-	phosphoserine phosphatase		gene	gene3774	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18860
RY45_18865	RY45_18865		RY45_18865	4181774	4182382	+	SerB-cotransposed membrane protein		gene	gene3775	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18865
RY45_18870	RY45_18870		RY45_18870	4182436	4184682	+	diguanylate cyclase		gene	gene3776	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18870
RY45_18875	RY45_18875	deoD	deoD	4184752	4185468	-	purine nucleoside phosphorylase	catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate	gene	gene3777	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18875
RY45_18880	RY45_18880		RY45_18880	4185546	4186754	-	phosphopentomutase		gene	gene3778	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18880
RY45_18885	RY45_18885		RY45_18885	4186769	4188100	-	thymidine phosphorylase		gene	gene3779	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18885
RY45_18890	RY45_18890		RY45_18890	4188211	4188984	-	deoxyribose-phosphate aldolase	catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate	gene	gene3780	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18890
RY45_18895	RY45_18895		RY45_18895	4189376	4189546	-	XapX domain protein		gene	gene3781	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18895
RY45_18900	RY45_18900		RY45_18900	4189670	4190944	-	nucleoside transporter NupC		gene	gene3782	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18900
RY45_18905	RY45_18905		RY45_18905	4191158	4191946	-	deoxyribonuclease		gene	gene3783	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18905
RY45_18910	RY45_18910		RY45_18910	4191987	4192604	+	N-terminal cleavage protein		gene	gene3784	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18910
RY45_18915	RY45_18915		RY45_18915	4192959	4194311	-	RNA methyltransferase		gene	gene3785	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18915
RY45_18920	RY45_18920		RY45_18920	4194648	4196084	-	ammonia channel protein		gene	gene3786	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18920
RY45_18925	RY45_18925		RY45_18925	4196664	4197704	-	integrase		gene	gene3787	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18925
RY45_18930	RY45_18930		RY45_18930	4197959	4198741	+	hypothetical protein		gene	gene3788	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18930
RY45_18935	RY45_18935		RY45_18935	4199400	4200233	+	hypothetical protein		gene	gene3789	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18935
RY45_18940	RY45_18940		RY45_18940	4200293	4200967	-	repressor		gene	gene3790	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18940
RY45_18945	RY45_18945		RY45_18945	4201101	4201286	+	Cro/Cl family transcriptional regulator		gene	gene3791	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18945
RY45_18950	RY45_18950		RY45_18950	4201298	4201585	+	hypothetical protein		gene	gene3792	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18950
RY45_18955	RY45_18955		RY45_18955	4201608	4202096	+	phage protein		gene	gene3793	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18955
RY45_18960	RY45_18960		RY45_18960	4202110	4202538	+	hypothetical protein		gene	gene3794	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18960
RY45_18965	RY45_18965		RY45_18965	4202577	4202762	+	hypothetical protein		gene	gene3795	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18965
RY45_18970	RY45_18970		RY45_18970	4202795	4203052	+	XRE family transcriptional regulator		gene	gene3796	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18970
RY45_18975	RY45_18975	hypothetical protein	hypothetical protein	4203320	4203502	+		disrupted	pseudogene	gene3797	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18975
RY45_18980	RY45_18980		RY45_18980	4203488	4203769	+	hypothetical protein		gene	gene3798	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18980
RY45_18985	RY45_18985		RY45_18985	4203766	4204050	+	hypothetical protein		gene	gene3799	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18985
RY45_18990	RY45_18990	hypothetical protein	hypothetical protein	4204248	4206041	+		disrupted	pseudogene	gene3800	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18990
RY45_18995	RY45_18995		RY45_18995	4206953	4207333	-	hypothetical protein		gene	gene3801	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_18995
RY45_19000	RY45_19000		RY45_19000	4207761	4208174	+	hypothetical protein		gene	gene3802	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19000
RY45_19005	RY45_19005		RY45_19005	4208521	4209567	-	phage portal protein		gene	gene3803	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19005
RY45_19010	RY45_19010	terminase	terminase	4209578	4211383	-		disrupted	pseudogene	gene3804	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19010
RY45_19015	RY45_19015		RY45_19015	4211585	4212478	+	capsid protein		gene	gene3805	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19015
RY45_19020	RY45_19020		RY45_19020	4212489	4213568	+	oxidoreductase		gene	gene3806	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19020
RY45_19025	RY45_19025		RY45_19025	4213571	4214296	+	terminase		gene	gene3807	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19025
RY45_19030	RY45_19030		RY45_19030	4214402	4214863	+	head protein		gene	gene3808	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19030
RY45_19035	RY45_19035		RY45_19035	4214860	4215375	+	phage protein		gene	gene3809	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19035
RY45_19040	RY45_19040		RY45_19040	4215401	4216537	+	phage tail protein		gene	gene3810	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19040
RY45_19045	RY45_19045		RY45_19045	4216541	4216996	+	tail protein		gene	gene3811	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19045
RY45_19050	RY45_19050		RY45_19050	4217007	4217216	+	phage protein		gene	gene3812	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19050
RY45_19055	RY45_19055		RY45_19055	4217240	4217551	+	holin		gene	gene3813	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19055
RY45_19060	RY45_19060		RY45_19060	4217553	4218032	+	hypothetical protein		gene	gene3814	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19060
RY45_19065	RY45_19065		RY45_19065	4218029	4218463	+	phage protein		gene	gene3815	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19065
RY45_19070	RY45_19070		RY45_19070	4218441	4218590	+	phage protein		gene	gene3816	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19070
RY45_19075	RY45_19075		RY45_19075	4218587	4218853	+	hypothetical protein		gene	gene3817	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19075
RY45_19080	RY45_19080		RY45_19080	4219042	4221099	+	tail protein		gene	gene3818	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19080
RY45_19085	RY45_19085		RY45_19085	4221096	4221419	+	phage protein		gene	gene3819	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19085
RY45_19090	RY45_19090		RY45_19090	4221416	4222603	+	phage protein		gene	gene3820	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19090
RY45_19095	RY45_19095		RY45_19095	4222596	4223198	+	phage protein		gene	gene3821	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19095
RY45_19100	RY45_19100		RY45_19100	4223195	4225285	+	phage tail protein		gene	gene3822	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19100
RY45_19105	RY45_19105		RY45_19105	4225301	4225726	+	tail protein		gene	gene3823	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19105
RY45_19110	RY45_19110		RY45_19110	4225723	4226604	+	hypothetical protein		gene	gene3824	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19110
RY45_19115	RY45_19115		RY45_19115	4226601	4227152	+	phage protein		gene	gene3825	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19115
RY45_19120	RY45_19120		RY45_19120	4227149	4228762	+	phage protein		gene	gene3826	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19120
RY45_19125	RY45_19125	hypothetical protein	hypothetical protein	4229190	4229414	+		disrupted	pseudogene	gene3827	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19125
RY45_19130	RY45_19130		RY45_19130	4230086	4231456	+	cell filamentation protein Fic		gene	gene3828	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19130
RY45_19135	RY45_19135		RY45_19135	4231610	4231695	-	tRNA-Leu		tRNA	gene3829	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19135
RY45_19140	RY45_19140		RY45_19140	4231839	4232360	+	RDD domain-containing protein		gene	gene3830	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19140
RY45_19145	RY45_19145		RY45_19145	4232518	4233588	-	lipopolysaccharide ABC transporter permease	with LptABCF is involved in the transport of lipopolysaccharides	gene	gene3831	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19145
RY45_19150	RY45_19150		RY45_19150	4233730	4234842	-	permease		gene	gene3832	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19150
RY45_19155	RY45_19155		RY45_19155	4235015	4236523	+	multifunctional aminopeptidase A	catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor	gene	gene3833	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19155
RY45_19160	RY45_19160		RY45_19160	4236686	4237141	+	DNA polymerase III subunit chi		gene	gene3834	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19160
RY45_19165	RY45_19165		RY45_19165	4237207	4240059	+	valyl-tRNA synthase		gene	gene3835	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19165
RY45_19170	RY45_19170		RY45_19170	4240246	4241538	+	membrane protein		gene	gene3836	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19170
RY45_19175	RY45_19175		RY45_19175	4241557	4242222	+	membrane protein		gene	gene3837	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19175
RY45_19180	RY45_19180		RY45_19180	4242362	4243189	+	peptidase S11		gene	gene3838	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19180
RY45_19185	RY45_19185		RY45_19185	4243551	4243627	-	tRNA-Arg		tRNA	gene3839	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19185
RY45_19190	RY45_19190		RY45_19190	4243656	4243732	-	tRNA-Arg		tRNA	gene3840	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19190
RY45_19195	RY45_19195		RY45_19195	4243761	4243837	-	tRNA-Arg		tRNA	gene3841	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19195
RY45_19200	RY45_19200		RY45_19200	4243864	4243940	-	tRNA-Arg		tRNA	gene3842	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19200
RY45_19205	RY45_19205		RY45_19205	4244040	4244116	-	tRNA-Arg		tRNA	gene3843	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19205
RY45_19210	RY45_19210		RY45_19210	4244120	4244212	-	tRNA-Ser		tRNA	gene3844	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19210
RY45_19215	RY45_19215		RY45_19215	4244427	4244615	-	carbon storage regulator	affects carbohydrate metabolism%3B has regulatory role in many processes	gene	gene3845	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19215
RY45_19220	RY45_19220		RY45_19220	4244709	4245956	-	aspartate kinase		gene	gene3846	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19220
RY45_19225	RY45_19225		RY45_19225	4245973	4248597	-	alanyl-tRNA synthetase		gene	gene3847	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19225
RY45_19230	RY45_19230		RY45_19230	4249070	4249570	-	RecX family transcriptional regulator		gene	gene3848	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19230
RY45_19235	RY45_19235		RY45_19235	4249612	4250676	-	recombinase RecA		gene	gene3849	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19235
RY45_19240	RY45_19240		RY45_19240	4250756	4251247	-	damage-inducible protein CinA		gene	gene3850	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19240
RY45_19245	RY45_19245		RY45_19245	4251482	4254064	+	DNA mismatch repair protein MutS	This protein performs the mismatch recognition step during the DNA repair process	gene	gene3851	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19245
RY45_19250	RY45_19250		RY45_19250	4254158	4255756	-	choline transporter		gene	gene3852	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19250
RY45_19255	RY45_19255		RY45_19255	4255766	4256293	-	hypothetical protein		gene	gene3853	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19255
RY45_19260	RY45_19260		RY45_19260	4256457	4256936	+	MarR family transcriptional regulator		gene	gene3854	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19260
RY45_19265	RY45_19265		RY45_19265	4257032	4257994	+	transposase		gene	gene3855	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19265
RY45_19270	RY45_19270		RY45_19270	4258022	4258603	-	hypothetical protein		gene	gene3856	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19270
RY45_19275	RY45_19275		RY45_19275	4258766	4259710	+	2-hydroxyacid dehydrogenase		gene	gene3857	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19275
RY45_19280	RY45_19280		RY45_19280	4259777	4261114	-	peptidase M23		gene	gene3858	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19280
RY45_19285	RY45_19285		RY45_19285	4261375	4262667	+	hypothetical protein		gene	gene3859	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19285
RY45_19290	RY45_19290		RY45_19290	4262667	4263608	+	TRAP ABC transporter substrate-binding protein		gene	gene3860	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19290
RY45_19295	RY45_19295		RY45_19295	4263603	4264277	-	sulfate adenylyltransferase		gene	gene3861	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19295
RY45_19300	RY45_19300		RY45_19300	4264363	4265277	-	zinc ABC transporter substrate-binding protein		gene	gene3862	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19300
RY45_19305	RY45_19305	znuC	znuC	4265372	4266136	+	zinc ABC transporter ATPase	involved in transport of zinc(II) with ZnuA and C	gene	gene3863	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19305
RY45_19310	RY45_19310		RY45_19310	4266158	4266937	+	membrane protein		gene	gene3864	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19310
RY45_19315	RY45_19315		RY45_19315	4267029	4267946	-	LysR family transcriptional regulator		gene	gene3865	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19315
RY45_19320	RY45_19320		RY45_19320	4268038	4268895	+	membrane protein		gene	gene3866	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19320
RY45_19325	RY45_19325		RY45_19325	4268906	4269487	-	IclR family transcriptional regulator		gene	gene3867	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19325
RY45_19330	RY45_19330		RY45_19330	4269590	4270498	+	membrane protein		gene	gene3868	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19330
RY45_19335	RY45_19335		RY45_19335	4270480	4271217	-	ABC transporter substrate-binding protein		gene	gene3869	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19335
RY45_19340	RY45_19340		RY45_19340	4271262	4271672	+	hypothetical protein		gene	gene3870	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19340
RY45_19345	RY45_19345		RY45_19345	4271886	4272104	-	phage-shock protein		gene	gene3871	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19345
RY45_19350	RY45_19350		RY45_19350	4272147	4272353	-	phage-shock protein		gene	gene3872	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19350
RY45_19355	RY45_19355		RY45_19355	4272356	4273018	-	phage-shock protein		gene	gene3873	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19355
RY45_19360	RY45_19360		RY45_19360	4273225	4273953	-	acyl-phosphate glycerol 3-phosphate acyltransferase		gene	gene3874	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19360
RY45_19365	RY45_19365		RY45_19365	4274130	4274510	+	membrane protein		gene	gene3875	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19365
RY45_19370	RY45_19370		RY45_19370	4274565	4276607	+	protein-disulfide reductase		gene	gene3876	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19370
RY45_19375	RY45_19375		RY45_19375	4276618	4277358	+	copper-sensitivity protein C		gene	gene3877	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19375
RY45_19380	RY45_19380		RY45_19380	4277362	4277889	+	alkyl hydroperoxide reductase		gene	gene3878	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19380
RY45_19385	RY45_19385		RY45_19385	4278169	4278453	+	molecular chaperone DnaJ		gene	gene3879	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19385
RY45_19390	RY45_19390		RY45_19390	4278477	4279019	+	hypothetical protein		gene	gene3880	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19390
RY45_19395	RY45_19395		RY45_19395	4279032	4279799	+	hypothetical protein		gene	gene3881	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19395
RY45_19400	RY45_19400		RY45_19400	4279811	4280713	+	hypothetical protein		gene	gene3882	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19400
RY45_19405	RY45_19405		RY45_19405	4280951	4281202	+	hypothetical protein		gene	gene3883	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19405
RY45_19410	RY45_19410		RY45_19410	4281261	4281635	+	hypothetical protein		gene	gene3884	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19410
RY45_19415	RY45_19415		RY45_19415	4281829	4283073	-	major facilitator transporter		gene	gene3885	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19415
RY45_19420	RY45_19420		RY45_19420	4283161	4284069	+	LysR family transcriptional regulator		gene	gene3886	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19420
RY45_19425	RY45_19425		RY45_19425	4285556	4287850	-	DNA topoisomerase IV subunit A	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling	gene	gene3887	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19425
RY45_19430	RY45_19430		RY45_19430	4287922	4289817	-	DNA topoisomerase IV subunit B	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling	gene	gene3888	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19430
RY45_19435	RY45_19435		RY45_19435	4289932	4291941	-	fusaric acid resistance protein		gene	gene3889	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19435
RY45_19440	RY45_19440		RY45_19440	4291943	4292809	-	membrane protein		gene	gene3890	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19440
RY45_19445	RY45_19445		RY45_19445	4292802	4293041	-	membrane protein		gene	gene3891	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19445
RY45_19450	RY45_19450		RY45_19450	4293138	4293539	-	aldehyde-activating protein		gene	gene3892	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19450
RY45_19455	RY45_19455		RY45_19455	4293576	4294199	-	DNA mismatch repair protein MutT		gene	gene3893	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19455
RY45_19460	RY45_19460		RY45_19460	4294202	4294789	-	esterase		gene	gene3894	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19460
RY45_19465	RY45_19465		RY45_19465	4294799	4295617	-	diguanylate phosphodiesterase		gene	gene3895	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19465
RY45_19470	RY45_19470		RY45_19470	4295644	4296090	-	dehydrogenase		gene	gene3896	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19470
RY45_19475	RY45_19475	nudF	nudF	4296092	4296733	-	ADP-ribose pyrophosphatase	ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose	gene	gene3897	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19475
RY45_19480	RY45_19480	tolC	tolC	4297038	4298363	+	outer membrane channel protein	trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules%3B functions with a number of efflux systems in the inner membrane to transport molecules out of the cell	gene	gene3898	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19480
RY45_19485	RY45_19485		RY45_19485	4298467	4299894	-	heptose 1-phosphate adenyltransferase	catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose	gene	gene3899	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19485
RY45_19490	RY45_19490		RY45_19490	4300200	4301123	+	lipid A biosynthesis lauroyl acyltransferase	Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA	gene	gene3900	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19490
RY45_19495	RY45_19495		RY45_19495	4301276	4301743	+	energy transducer TonB		gene	gene3901	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19495
RY45_19500	RY45_19500		RY45_19500	4301854	4302813	-	adenylate cyclase		gene	gene3902	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19500
RY45_19505	RY45_19505		RY45_19505	4302983	4303663	+	phosphate transport regulator		gene	gene3903	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19505
RY45_19510	RY45_19510		RY45_19510	4303687	4304952	+	phosphate permease		gene	gene3904	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19510
RY45_19515	RY45_19515		RY45_19515	4305100	4305561	+	hypothetical protein		gene	gene3905	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19515
RY45_19520	RY45_19520		RY45_19520	4305601	4306863	-	hypothetical protein		gene	gene3906	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19520
RY45_19525	RY45_19525		RY45_19525	4307088	4307810	-	acetyltransferase		gene	gene3907	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19525
RY45_19530	RY45_19530		RY45_19530	4307800	4308237	-	rhodanese		gene	gene3908	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19530
RY45_19535	RY45_19535		RY45_19535	4308255	4308722	-	peroxiredoxin		gene	gene3909	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19535
RY45_19540	RY45_19540		RY45_19540	4308851	4310287	+	GntR family transcriptional regulator		gene	gene3910	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19540
RY45_19545	RY45_19545		RY45_19545	4310303	4311196	-	LysR family transcriptional regulator		gene	gene3911	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19545
RY45_19550	RY45_19550		RY45_19550	4311324	4311725	+	Holin-like protein CidA		gene	gene3912	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19550
RY45_19555	RY45_19555		RY45_19555	4311718	4312407	+	LrgB		gene	gene3913	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19555
RY45_19560	RY45_19560	hypothetical protein	hypothetical protein	4312504	4313394	+		disrupted	pseudogene	gene3914	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19560
RY45_19565	RY45_19565		RY45_19565	4313487	4314365	+	hypothetical protein		gene	gene3915	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19565
RY45_19570	RY45_19570	cca	cca	4314453	4315691	-	2'%2C 3'-cyclic nucleotide 2'-phosphodiesterase	catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template%3B phosphohydrolase activities include hydrolysis of pyrophosphate%2C 5'-nucleoside tri- and diphosphates%2C NADP%2C and 2'-AMP with the production of Pi%2C metal-dependent phosphodiesterase activity for 2'%2C3'-cAMP%2C 2'%2C3'-cGMP%2C and 2'%2C3'-cCMP%2C and hydrolysis 2'%2C3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides%3B these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases	gene	gene3916	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19570
RY45_19575	RY45_19575		RY45_19575	4315964	4317610	+	ATPase AAA		gene	gene3917	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19575
RY45_19580	RY45_19580		RY45_19580	4317610	4318290	+	general secretion pathway protein GspB		gene	gene3918	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19580
RY45_19585	RY45_19585		RY45_19585	4318488	4319549	+	adenine glycosylase		gene	gene3919	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19585
RY45_19590	RY45_19590		RY45_19590	4319558	4319830	+	iron transporter		gene	gene3920	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19590
RY45_19595	RY45_19595		RY45_19595	4319924	4321024	+	murein transglycosylase		gene	gene3921	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19595
RY45_19600	RY45_19600		RY45_19600	4321093	4321473	-	DNA-binding protein		gene	gene3922	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19600
RY45_19605	RY45_19605		RY45_19605	4321711	4322727	+	phosphatidylcholine-sterol acyltransferase		gene	gene3923	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19605
RY45_19610	RY45_19610		RY45_19610	4322780	4323514	-	hypothetical protein		gene	gene3924	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19610
RY45_19615	RY45_19615		RY45_19615	4323747	4324805	+	membrane protein	OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d	gene	gene3925	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19615
RY45_19620	RY45_19620		RY45_19620	4324890	4325462	-	lipoprotein		gene	gene3926	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19620
RY45_19625	RY45_19625		RY45_19625	4325459	4327105	-	paraquat-inducible protein B		gene	gene3927	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19625
RY45_19630	RY45_19630		RY45_19630	4327098	4328378	-	paraquat-inducible protein A		gene	gene3928	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19630
RY45_19635	RY45_19635		RY45_19635	4328556	4328918	+	Fe-S cluster assembly protein HesB		gene	gene3929	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19635
RY45_19640	RY45_19640		RY45_19640	4329058	4329648	-	haloacid dehalogenase		gene	gene3930	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19640
RY45_19645	RY45_19645		RY45_19645	4329714	4330817	-	diguanylate cyclase		gene	gene3931	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19645
RY45_19650	RY45_19650		RY45_19650	4330822	4332462	-	diguanylate cyclase		gene	gene3932	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19650
RY45_19655	RY45_19655		RY45_19655	4332557	4333429	-	dihydrodipicolinate synthase		gene	gene3933	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19655
RY45_19660	RY45_19660		RY45_19660	4333710	4334738	+	16S rRNA methyltransferase		gene	gene3934	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19660
RY45_19665	RY45_19665	glgC	glgC	4334888	4336105	+	glucose-1-phosphate adenylyltransferase	catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate	gene	gene3935	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19665
RY45_19670	RY45_19670		RY45_19670	4336095	4337555	+	glycogen synthase		gene	gene3936	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19670
RY45_19675	RY45_19675		RY45_19675	4337672	4337757	+	tRNA-Leu		tRNA	gene3937	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19675
RY45_19680	RY45_19680		RY45_19680	4337813	4337898	+	tRNA-Leu		tRNA	gene3938	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19680
RY45_19685	RY45_19685		RY45_19685	4337943	4338028	+	tRNA-Leu		tRNA	gene3939	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19685
RY45_19690	RY45_19690		RY45_19690	4338074	4338159	+	tRNA-Leu		tRNA	gene3940	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19690
RY45_19695	RY45_19695		RY45_19695	4338231	4338316	+	tRNA-Leu		tRNA	gene3941	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19695
RY45_19700	RY45_19700		RY45_19700	4338426	4338698	+	hypothetical protein		gene	gene3942	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19700
RY45_19705	RY45_19705		RY45_19705	4338693	4338902	-	hypothetical protein		gene	gene3943	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19705
RY45_19710	RY45_19710		RY45_19710	4339202	4340611	+	antiporter		gene	gene3944	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19710
RY45_19715	RY45_19715		RY45_19715	4340718	4341641	+	LysR family transcriptional regulator		gene	gene3945	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19715
RY45_19720	RY45_19720		RY45_19720	4341841	4342986	+	spermidine/putrescine ABC transporter substrate-binding protein		gene	gene3946	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19720
RY45_19725	RY45_19725		RY45_19725	4343059	4344072	+	polyamine ABC transporter ATP-binding protein		gene	gene3947	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19725
RY45_19730	RY45_19730		RY45_19730	4344069	4345037	+	spermidine/putrescine ABC transporter permease		gene	gene3948	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19730
RY45_19735	RY45_19735		RY45_19735	4345148	4345963	+	spermidine/putrescine ABC transporter permease		gene	gene3949	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19735
RY45_19740	RY45_19740		RY45_19740	4345993	4347423	+	gamma-aminobutyraldehyde dehydrogenase	catalyzes the formation of 4-aminobutanoate from 4-aminobutanal%3B involved in putrescine degradation	gene	gene3950	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19740
RY45_19745	RY45_19745		RY45_19745	4347580	4347912	-	hypothetical protein		gene	gene3951	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19745
RY45_19750	RY45_19750		RY45_19750	4348248	4349123	-	membrane protein		gene	gene3952	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19750
RY45_19755	RY45_19755		RY45_19755	4349218	4349676	+	AsnC family transcriptional regulator		gene	gene3953	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19755
RY45_19760	RY45_19760		RY45_19760	4349795	4350400	-	maltose acetyltransferase		gene	gene3954	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19760
RY45_19765	RY45_19765		RY45_19765	4350404	4352065	-	trehalose-6-phosphate hydrolase		gene	gene3955	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19765
RY45_19770	RY45_19770		RY45_19770	4352134	4353564	-	PTS system trehalose(maltose)-specific transporter subunits IIBC	phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel	gene	gene3956	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19770
RY45_19775	RY45_19775	treR	treR	4353757	4354704	-	trehalose repressor	regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon	gene	gene3957	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19775
RY45_19780	RY45_19780		RY45_19780	4354844	4355794	+	transporter		gene	gene3958	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19780
RY45_19785	RY45_19785		RY45_19785	4355895	4356089	+	mercuric reductase		gene	gene3959	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19785
RY45_19790	RY45_19790	ansB	ansB	4356222	4357280	+	L-asparaginase II	catalyzes the formation of aspartate from asparagine%2C periplasmic%3B regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis	gene	gene3960	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19790
RY45_19795	RY45_19795		RY45_19795	4357372	4358358	-	membrane protein		gene	gene3961	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19795
RY45_19800	RY45_19800		RY45_19800	4358750	4359337	+	hypothetical protein		gene	gene3962	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19800
RY45_19805	RY45_19805	mgsA	mgsA	4359398	4359856	-	methylglyoxal synthase	catalyzes the formation of methylglyoxal from glycerone phosphate	gene	gene3963	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19805
RY45_19810	RY45_19810		RY45_19810	4359945	4362050	-	hypothetical protein		gene	gene3964	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19810
RY45_19815	RY45_19815		RY45_19815	4362253	4362732	-	bacterioferritin		gene	gene3965	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19815
RY45_19820	RY45_19820		RY45_19820	4362875	4363081	-	(2Fe-2S)-binding protein		gene	gene3966	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19820
RY45_19825	RY45_19825		RY45_19825	4363219	4363530	+	transcriptional regulator		gene	gene3967	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19825
RY45_19830	RY45_19830		RY45_19830	4363527	4365593	+	hypothetical protein		gene	gene3968	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19830
RY45_19835	RY45_19835		RY45_19835	4365580	4366299	-	short-chain dehydrogenase		gene	gene3969	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19835
RY45_19840	RY45_19840		RY45_19840	4366506	4367519	+	chemotaxis protein CheV		gene	gene3970	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19840
RY45_19845	RY45_19845		RY45_19845	4367580	4368752	-	membrane protein		gene	gene3971	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19845
RY45_19850	RY45_19850		RY45_19850	4369095	4369610	-	hypothetical protein		gene	gene3972	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19850
RY45_19855	RY45_19855		RY45_19855	4369730	4370062	+	hypothetical protein		gene	gene3973	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19855
RY45_19860	RY45_19860		RY45_19860	4370090	4371433	-	Ion channel protein		gene	gene3974	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19860
RY45_19865	RY45_19865		RY45_19865	4371966	4372355	-	hypothetical protein		gene	gene3975	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19865
RY45_19870	RY45_19870		RY45_19870	4372389	4372688	-	hypothetical protein		gene	gene3976	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19870
RY45_19875	RY45_19875		RY45_19875	4374206	4374478	+	hypothetical protein		gene	gene3977	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19875
RY45_19880	RY45_19880		RY45_19880	4374488	4374724	+	hypothetical protein		gene	gene3978	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19880
RY45_19885	RY45_19885		RY45_19885	4375161	4375547	-	hypothetical protein		gene	gene3979	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19885
RY45_19890	RY45_19890		RY45_19890	4376160	4378469	-	type IV secretion protein Rhs		gene	gene3980	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19890
RY45_19895	RY45_19895		RY45_19895	4378804	4379322	-	major exported protein		gene	gene3981	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19895
RY45_19900	RY45_19900		RY45_19900	4380103	4380178	-	tRNA-Asn		tRNA	gene3982	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19900
RY45_19905	RY45_19905		RY45_19905	4380224	4380299	-	tRNA-Phe		tRNA	gene3983	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19905
RY45_19910	RY45_19910		RY45_19910	4380303	4380378	-	tRNA-Thr		tRNA	gene3984	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19910
RY45_19915	RY45_19915		RY45_19915	4380431	4380506	-	tRNA-Phe		tRNA	gene3985	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19915
RY45_19920	RY45_19920		RY45_19920	4380554	4381216	-	glycerol-3-phosphate acyltransferase		gene	gene3986	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19920
RY45_19925	RY45_19925		RY45_19925	4381393	4381764	+	dihydroneopterin aldolase		gene	gene3987	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19925
RY45_19930	RY45_19930		RY45_19930	4381870	4382379	+	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase		gene	gene3988	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19930
RY45_19935	RY45_19935		RY45_19935	4382501	4382983	+	DNA-binding protein		gene	gene3989	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19935
RY45_19940	RY45_19940		RY45_19940	4382993	4384381	-	EmrB/QacA subfamily drug resistance transporter		gene	gene3990	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19940
RY45_19945	RY45_19945		RY45_19945	4384443	4385570	-	cobalamin biosynthesis protein CobW		gene	gene3991	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19945
RY45_19950	RY45_19950		RY45_19950	4385642	4387036	-	FAD-binding protein		gene	gene3992	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19950
RY45_19955	RY45_19955		RY45_19955	4387160	4387777	-	amino acid transporter		gene	gene3993	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19955
RY45_19960	RY45_19960		RY45_19960	4387854	4388762	+	LysR family transcriptional regulator		gene	gene3994	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19960
RY45_19965	RY45_19965		RY45_19965	4388767	4390335	-	diguanylate phosphodiesterase		gene	gene3995	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19965
RY45_19970	RY45_19970		RY45_19970	4390505	4393102	-	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate	gene	gene3996	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19970
RY45_19975	RY45_19975		RY45_19975	4393331	4395589	-	serine protease		gene	gene3997	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19975
RY45_19980	RY45_19980	chemotaxis protein	chemotaxis protein	4395827	4397678	+		disrupted	pseudogene	gene3998	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19980
RY45_19985	RY45_19985	hemolysin	hemolysin	4397812	4399445	+		disrupted	pseudogene	gene3999	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19985
RY45_19990	RY45_19990		RY45_19990	4399576	4399758	+	hypothetical protein		gene	gene4000	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19990
RY45_19995	RY45_19995		RY45_19995	4399826	4401253	-	dihydrolipoamide dehydrogenase	E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide	gene	gene4001	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_19995
RY45_20000	RY45_20000	aceF	aceF	4401403	4403304	-	pyruvate dehydrogenase	E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains	gene	gene4002	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20000
RY45_20005	RY45_20005	aceE	aceE	4403418	4406078	-	pyruvate dehydrogenase	E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC	gene	gene4003	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20005
RY45_20010	RY45_20010	pdhR	pdhR	4406158	4406922	-	transcriptional regulator PdhR	activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex	gene	gene4004	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20010
RY45_20015	RY45_20015		RY45_20015	4407282	4407701	+	hypothetical protein		gene	gene4005	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20015
RY45_20020	RY45_20020		RY45_20020	4407918	4408388	+	aspartic protease		gene	gene4006	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20020
RY45_20025	RY45_20025		RY45_20025	4408394	4409251	+	nicotinate-nucleotide pyrophosphorylase	catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide	gene	gene4007	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20025
RY45_20030	RY45_20030		RY45_20030	4409574	4410002	+	pilus assembly protein TapA		gene	gene4008	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20030
RY45_20035	RY45_20035		RY45_20035	4410006	4411712	+	general secretion pathway protein GspE		gene	gene4009	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20035
RY45_20040	RY45_20040		RY45_20040	4411828	4413069	+	type II secretion system protein F		gene	gene4010	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20040
RY45_20045	RY45_20045		RY45_20045	4413092	4413964	+	methyltransferase		gene	gene4011	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20045
RY45_20050	RY45_20050	coaE	coaE	4413984	4414598	+	dephospho-CoA kinase	catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis	gene	gene4012	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20050
RY45_20055	RY45_20055		RY45_20055	4414636	4415358	+	hypothetical protein		gene	gene4013	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20055
RY45_20060	RY45_20060		RY45_20060	4415368	4415562	+	DNA gyrase inhibitor		gene	gene4014	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20060
RY45_20065	RY45_20065		RY45_20065	4415623	4416039	-	7%2C8-dihydro-8-oxoguanine-triphosphatase		gene	gene4015	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20065
RY45_20070	RY45_20070		RY45_20070	4416045	4417229	-	hypothetical protein		gene	gene4016	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20070
RY45_20075	RY45_20075	secA	secA	4417304	4420024	-	preprotein translocase subunit SecA	functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins	gene	gene4017	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20075
RY45_20080	RY45_20080		RY45_20080	4420084	4420989	-	peptidase M23		gene	gene4018	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20080
RY45_20085	RY45_20085	lpxC	lpxC	4421130	4422053	-	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis	gene	gene4019	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20085
RY45_20090	RY45_20090		RY45_20090	4422155	4423306	-	cell division protein FtsZ	GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function	gene	gene4020	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20090
RY45_20095	RY45_20095	ftsA	ftsA	4423347	4424606	-	cell division protein FtsA	ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane	gene	gene4021	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20095
RY45_20100	RY45_20100		RY45_20100	4424587	4425339	-	cell division protein FtsQ		gene	gene4022	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20100
RY45_20105	RY45_20105	murC	murC	4425437	4426891	-	UDP-N-acetylmuramate--alanine ligase	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis	gene	gene4023	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20105
RY45_20110	RY45_20110	murG	murG	4426888	4427973	-	UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase	N-acetylglucosaminyl transferase%3B UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis	gene	gene4024	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20110
RY45_20115	RY45_20115		RY45_20115	4427973	4429154	-	cell division protein FtsW	integral membrane protein involved in stabilizing FstZ ring during cell division	gene	gene4025	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20115
RY45_20120	RY45_20120	murD	murD	4429151	4430434	-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase	UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation	gene	gene4026	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20120
RY45_20125	RY45_20125		RY45_20125	4430438	4431520	-	phospho-N-acetylmuramoyl-pentapeptide-transferase		gene	gene4027	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20125
RY45_20130	RY45_20130	murF	murF	4431514	4432869	-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase		gene	gene4028	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20130
RY45_20135	RY45_20135	murE	murE	4432866	4434350	-	UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase	involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate	gene	gene4029	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20135
RY45_20140	RY45_20140		RY45_20140	4434331	4436085	-	cell division protein FtsI	penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis	gene	gene4030	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20140
RY45_20145	RY45_20145		RY45_20145	4436082	4436396	-	cell division protein FtsL		gene	gene4031	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20145
RY45_20150	RY45_20150		RY45_20150	4436400	4437338	-	16S rRNA methyltransferase		gene	gene4032	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20150
RY45_20155	RY45_20155		RY45_20155	4437339	4437797	-	cell division protein MraZ		gene	gene4033	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20155
RY45_20160	RY45_20160		RY45_20160	4438037	4438333	-	hypothetical protein		gene	gene4034	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20160
RY45_20165	RY45_20165		RY45_20165	4438591	4439445	+	lytic transglycosylase		gene	gene4035	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20165
RY45_20170	RY45_20170		RY45_20170	4439826	4440773	-	LafU		gene	gene4036	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20170
RY45_20175	RY45_20175		RY45_20175	4440773	4441630	-	chemotaxis protein		gene	gene4037	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20175
RY45_20180	RY45_20180		RY45_20180	4441678	4442391	-	flagellar biosynthesis sigma factor	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes	gene	gene4038	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20180
RY45_20185	RY45_20185		RY45_20185	4442399	4442857	-	LafF		gene	gene4039	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20185
RY45_20190	RY45_20190		RY45_20190	4442896	4443984	-	LafE		gene	gene4040	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20190
RY45_20195	RY45_20195		RY45_20195	4443975	4444313	-	LafX		gene	gene4041	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20195
RY45_20200	RY45_20200		RY45_20200	4444437	4444829	-	flagellar biosynthesis protein FliS		gene	gene4042	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20200
RY45_20205	RY45_20205		RY45_20205	4444883	4446166	-	LafB		gene	gene4043	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20205
RY45_20210	RY45_20210		RY45_20210	4446288	4447127	-	Lateral flagellin		gene	gene4044	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20210
RY45_20215	RY45_20215		RY45_20215	4447316	4447591	-	hypothetical protein		gene	gene4045	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20215
RY45_20220	RY45_20220		RY45_20220	4447588	4448874	-	hypothetical protein		gene	gene4046	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20220
RY45_20225	RY45_20225		RY45_20225	4448925	4449926	-	hypothetical protein		gene	gene4047	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20225
RY45_20230	RY45_20230		RY45_20230	4449948	4450847	-	flagellar hook-associated protein		gene	gene4048	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20230
RY45_20235	RY45_20235		RY45_20235	4450858	4452177	-	flagellar basal body rod protein FlgC		gene	gene4049	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20235
RY45_20240	RY45_20240		RY45_20240	4452177	4452575	-	peptidoglycan hydrolase		gene	gene4050	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20240
RY45_20245	RY45_20245		RY45_20245	4452584	4453687	-	flagellar P-ring protein FlgI		gene	gene4051	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20245
RY45_20250	RY45_20250	flgH	flgH	4453696	4454367	-	flagellar basal body L-ring protein	part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Yersinia have 2 copies of flgH	gene	gene4052	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20250
RY45_20255	RY45_20255	flgG	flgG	4454367	4455152	-	flagellar basal body rod protein FlgG	makes up the distal portion of the flagellar basal body rod%3B Bradyrhizobium has one thick flagellum and several thin flagella%3B the Bradyrhizobium protein in this cluster is associated with the thick flagella	gene	gene4053	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20255
RY45_20260	RY45_20260		RY45_20260	4455236	4455970	-	flagellar basal body rod protein FlgF		gene	gene4054	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20260
RY45_20265	RY45_20265	flgE	flgE	4455981	4457174	-	flagellar hook protein FlgE	the hook connects flagellar basal body to the flagellar filament%3B Vibrio parahaemolyticus protein is associated with the lateral flagella	gene	gene4055	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20265
RY45_20270	RY45_20270		RY45_20270	4457193	4457888	-	flagellar hook capping protein		gene	gene4056	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20270
RY45_20275	RY45_20275		RY45_20275	4457892	4458317	-	flagellar basal body rod protein FlgC		gene	gene4057	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20275
RY45_20280	RY45_20280		RY45_20280	4458320	4458709	-	flagellar basal-body rod protein FlgB		gene	gene4058	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20280
RY45_20285	RY45_20285		RY45_20285	4458770	4459561	+	flagellar basal body P-ring biosynthesis protein FlgA		gene	gene4059	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20285
RY45_20290	RY45_20290		RY45_20290	4459638	4459913	+	flagellar biosynthesis anti-sigma factor FlgM		gene	gene4060	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20290
RY45_20295	RY45_20295		RY45_20295	4459910	4460353	+	flagellar protein		gene	gene4061	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20295
RY45_20300	RY45_20300		RY45_20300	4460357	4460773	-	flagellar protein		gene	gene4062	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20300
RY45_20305	RY45_20305	fliI	fliI	4460783	4462114	-	ATP synthase	involved in type III protein export during flagellum assembly	gene	gene4063	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20305
RY45_20310	RY45_20310		RY45_20310	4462107	4462799	-	flagellar assembly protein FliH		gene	gene4064	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20310
RY45_20315	RY45_20315	fliG	fliG	4462812	4463840	-	flagellar motor switch protein G	One of three proteins involved in switching the direction of the flagellar rotation	gene	gene4065	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20315
RY45_20320	RY45_20320		RY45_20320	4463827	4465512	-	flagellar MS-ring protein		gene	gene4066	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20320
RY45_20325	RY45_20325		RY45_20325	4465587	4465901	-	flagellar hook-basal body protein FliE		gene	gene4067	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20325
RY45_20330	RY45_20330		RY45_20330	4465926	4467302	-	ATPase AAA		gene	gene4068	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20330
RY45_20335	RY45_20335		RY45_20335	4467725	4469800	-	flagellar biosynthesis protein FlhA		gene	gene4069	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20335
RY45_20340	RY45_20340		RY45_20340	4469804	4470940	-	flagellar biosynthesis protein FlhB		gene	gene4070	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20340
RY45_20345	RY45_20345		RY45_20345	4470937	4471719	-	flagellar biosynthesis protein FliR		gene	gene4071	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20345
RY45_20350	RY45_20350		RY45_20350	4471716	4471985	-	flagellar biosynthesis protein FliQ		gene	gene4072	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20350
RY45_20355	RY45_20355		RY45_20355	4471987	4472721	-	flagellar biosynthesis protein flip		gene	gene4073	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20355
RY45_20360	RY45_20360		RY45_20360	4472721	4473098	-	flagellar motor switch protein FliN		gene	gene4074	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20360
RY45_20365	RY45_20365		RY45_20365	4473106	4473816	-	flagellar motor switch protein		gene	gene4075	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20365
RY45_20370	RY45_20370		RY45_20370	4474711	4475544	-	tetrapyrrole methylase		gene	gene4077	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20370
RY45_20375	RY45_20375		RY45_20375	4475744	4477531	+	LppC superfamily protein		gene	gene4078	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20375
RY45_20380	RY45_20380		RY45_20380	4477473	4477844	+	hypothetical protein		gene	gene4079	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20380
RY45_20385	RY45_20385		RY45_20385	4477854	4478444	+	DnaA initiator-associating protein DiaA	Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein	gene	gene4080	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20385
RY45_20390	RY45_20390		RY45_20390	4478449	4479027	+	membrane protein		gene	gene4081	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20390
RY45_20395	RY45_20395		RY45_20395	4479080	4479505	-	peptidase		gene	gene4082	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20395
RY45_20400	RY45_20400	sspA	sspA	4479502	4480131	-	stringent starvation protein A	transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation	gene	gene4083	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20400
RY45_20405	RY45_20405		RY45_20405	4480219	4480953	-	cytochrome C		gene	gene4084	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20405
RY45_20410	RY45_20410		RY45_20410	4480950	4482167	-	cytochrome B		gene	gene4085	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20410
RY45_20415	RY45_20415		RY45_20415	4482170	4482760	-	ubiquinol-cytochrome C reductase		gene	gene4086	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20415
RY45_20420	RY45_20420		RY45_20420	4483056	4483448	-	30S ribosomal protein S9		gene	gene4087	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20420
RY45_20425	RY45_20425		RY45_20425	4483464	4483892	-	50S ribosomal protein L13		gene	gene4088	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20425
RY45_20430	RY45_20430		RY45_20430	4484159	4485253	-	ATPase		gene	gene4089	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20430
RY45_20435	RY45_20435		RY45_20435	4485394	4485774	+	membrane protein		gene	gene4090	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20435
RY45_20440	RY45_20440		RY45_20440	4485856	4487217	+	serine endoprotease DegQ		gene	gene4091	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20440
RY45_20445	RY45_20445		RY45_20445	4487307	4488428	+	peptidase		gene	gene4092	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20445
RY45_20450	RY45_20450		RY45_20450	4488737	4489099	+	transcriptional regulator		gene	gene4093	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20450
RY45_20455	RY45_20455		RY45_20455	4489100	4489465	+	hypothetical protein		gene	gene4094	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20455
RY45_20460	RY45_20460		RY45_20460	4489465	4489761	+	cytoplasmic protein		gene	gene4095	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20460
RY45_20465	RY45_20465		RY45_20465	4489802	4490578	+	membrane protein		gene	gene4096	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20465
RY45_20470	RY45_20470		RY45_20470	4490590	4491240	+	membrane protein		gene	gene4097	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20470
RY45_20475	RY45_20475		RY45_20475	4491284	4492423	+	dihydroorotase	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides	gene	gene4098	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20475
RY45_20480	RY45_20480		RY45_20480	4492407	4493522	+	L-seryl-tRNA selenium transferase		gene	gene4099	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20480
RY45_20485	RY45_20485		RY45_20485	4493522	4494262	+	2-dehydro-3-deoxyphosphooctonate aldolase		gene	gene4100	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20485
RY45_20490	RY45_20490		RY45_20490	4494367	4496271	+	transcription antiterminator BglG		gene	gene4101	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20490
RY45_20495	RY45_20495		RY45_20495	4496287	4496559	-	phosphohistidinoprotein-hexose phosphotransferase		gene	gene4102	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20495
RY45_20500	RY45_20500		RY45_20500	4496580	4497446	-	glmZ(sRNA)-inactivating NTPase		gene	gene4103	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20500
RY45_20505	RY45_20505		RY45_20505	4497489	4497935	-	PTS sugar transporter		gene	gene4104	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20505
RY45_20510	RY45_20510		RY45_20510	4497938	4498225	-	ribosome hibernation promoting factor HPF	YhbH%3B resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase%3B binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization)%3B seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing	gene	gene4105	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20510
RY45_20515	RY45_20515		RY45_20515	4498247	4499686	-	RNA polymerase factor sigma-54	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen	gene	gene4106	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20515
RY45_20520	RY45_20520		RY45_20520	4499752	4500477	-	sugar ABC transporter ATP-binding protein		gene	gene4107	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20520
RY45_20525	RY45_20525		RY45_20525	4500481	4501008	-	sugar ABC transporter substrate-binding protein		gene	gene4108	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20525
RY45_20530	RY45_20530		RY45_20530	4500995	4501555	-	hypothetical protein		gene	gene4109	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20530
RY45_20535	RY45_20535		RY45_20535	4501552	4502106	-	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase	forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis	gene	gene4110	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20535
RY45_20540	RY45_20540		RY45_20540	4502106	4503101	-	D-arabinose 5-phosphate isomerase		gene	gene4111	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20540
RY45_20545	RY45_20545		RY45_20545	4503309	4504109	+	ABC transporter ATP-binding protein	ABC transporter maintaining outer membrane lipid asymmetry	gene	gene4112	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20545
RY45_20550	RY45_20550		RY45_20550	4504109	4504888	+	ABC transporter permease		gene	gene4113	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20550
RY45_20555	RY45_20555		RY45_20555	4504896	4505387	+	ABC transporter substrate-binding protein		gene	gene4114	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20555
RY45_20560	RY45_20560		RY45_20560	4505397	4506029	+	toluene tolerance protein		gene	gene4115	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20560
RY45_20565	RY45_20565		RY45_20565	4506026	4506298	+	anti-anti-sigma factor		gene	gene4116	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20565
RY45_20570	RY45_20570		RY45_20570	4506298	4506555	+	cell division protein BolA		gene	gene4117	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20570
RY45_20575	RY45_20575		RY45_20575	4506573	4507829	+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation%3B gram-positive bacteria have 2 copies of MurA which are active	gene	gene4118	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20575
RY45_20580	RY45_20580		RY45_20580	4507915	4509258	-	protein PmbA		gene	gene4119	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20580
RY45_20585	RY45_20585		RY45_20585	4509351	4509896	+	hypothetical protein		gene	gene4120	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20585
RY45_20590	RY45_20590		RY45_20590	4509983	4513066	-	carboxypeptidase		gene	gene4121	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20590
RY45_20595	RY45_20595		RY45_20595	4513283	4513600	-	hypothetical protein		gene	gene4122	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20595
RY45_20600	RY45_20600		RY45_20600	4513895	4514009	-	5S ribosomal RNA		rRNA	gene4123	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20600
RY45_20605	RY45_20605		RY45_20605	4514114	4517028	-	23S ribosomal RNA		rRNA	gene4124	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20605
RY45_20610	RY45_20610		RY45_20610	4517259	4517334	-	tRNA-Glu		tRNA	gene4125	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20610
RY45_20615	RY45_20615		RY45_20615	4517530	4519087	-	16S ribosomal RNA		rRNA	gene4126	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20615
RY45_20620	RY45_20620		RY45_20620	4519576	4520772	+	heme transporter CcmB		gene	gene4127	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20620
RY45_20625	RY45_20625		RY45_20625	4520781	4521350	-	XRE family transcriptional regulator		gene	gene4128	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20625
RY45_20630	RY45_20630		RY45_20630	4521472	4522623	+	membrane protein		gene	gene4129	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20630
RY45_20635	RY45_20635		RY45_20635	4522774	4523838	+	hypothetical protein		gene	gene4130	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20635
RY45_20640	RY45_20640	metF	metF	4523901	4524797	-	5%2C10-methylenetetrahydrofolate reductase	MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor	gene	gene4131	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20640
RY45_20645	RY45_20645		RY45_20645	4525126	4525917	+	acetyltransferase		gene	gene4132	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20645
RY45_20650	RY45_20650		RY45_20650	4525981	4527465	-	sugar ABC transporter substrate-binding protein		gene	gene4133	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20650
RY45_20655	RY45_20655		RY45_20655	4527474	4529453	-	chemotaxis protein		gene	gene4134	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20655
RY45_20660	RY45_20660		RY45_20660	4529674	4530285	-	membrane protein	receptor for colicin S4	gene	gene4135	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20660
RY45_20665	RY45_20665		RY45_20665	4530732	4532417	-	diguanylate cyclase		gene	gene4136	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20665
RY45_20670	RY45_20670		RY45_20670	4532558	4535386	-	excinuclease ABC subunit A		gene	gene4137	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20670
RY45_20675	RY45_20675		RY45_20675	4535482	4536141	-	LuxR family transcriptional regulator		gene	gene4138	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20675
RY45_20680	RY45_20680		RY45_20680	4536665	4537243	+	single-stranded DNA-binding protein		gene	gene4139	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20680
RY45_20685	RY45_20685		RY45_20685	4537411	4538169	+	polar amino acid ABC transporter		gene	gene4140	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20685
RY45_20690	RY45_20690		RY45_20690	4538826	4539704	+	cation transporter		gene	gene4141	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20690
RY45_20695	RY45_20695		RY45_20695	4539854	4540126	+	hypothetical protein		gene	gene4142	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20695
RY45_20700	RY45_20700		RY45_20700	4540527	4540739	+	cold-shock protein		gene	gene4143	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20700
RY45_20705	RY45_20705		RY45_20705	4540741	4540977	-	hypothetical protein		gene	gene4144	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20705
RY45_20710	RY45_20710		RY45_20710	4541148	4543094	+	ligand-gated channel protein		gene	gene4145	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20710
RY45_20715	RY45_20715		RY45_20715	4543129	4544544	-	diguanylate cyclase		gene	gene4146	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20715
RY45_20720	RY45_20720		RY45_20720	4544720	4546111	-	histidine kinase		gene	gene4147	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20720
RY45_20725	RY45_20725		RY45_20725	4546116	4546838	-	chemotaxis protein CheY		gene	gene4148	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20725
RY45_20730	RY45_20730		RY45_20730	4547019	4547198	+	hypothetical protein		gene	gene4149	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20730
RY45_20735	RY45_20735		RY45_20735	4547281	4547607	+	hypothetical protein		gene	gene4150	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20735
RY45_20740	RY45_20740		RY45_20740	4547827	4548177	+	hypothetical protein		gene	gene4151	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20740
RY45_20745	RY45_20745		RY45_20745	4548235	4548654	-	hypothetical protein		gene	gene4152	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20745
RY45_20750	RY45_20750		RY45_20750	4548814	4549815	-	diguanylate cyclase		gene	gene4153	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20750
RY45_20755	RY45_20755		RY45_20755	4550004	4550924	-	AraC family transcriptional regulator		gene	gene4154	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20755
RY45_20760	RY45_20760		RY45_20760	4551000	4551398	+	glyoxalase		gene	gene4155	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20760
RY45_20765	RY45_20765		RY45_20765	4552557	4553147	-	hypothetical protein		gene	gene4156	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20765
RY45_20770	RY45_20770		RY45_20770	4553241	4555304	-	exodeoxyribonuclease V subunit alpha		gene	gene4157	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20770
RY45_20775	RY45_20775		RY45_20775	4555301	4558921	-	exodeoxyribonuclease V subunit beta		gene	gene4158	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20775
RY45_20780	RY45_20780		RY45_20780	4558921	4562271	-	exodeoxyribonuclease V subunit gamma		gene	gene4159	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20780
RY45_20785	RY45_20785		RY45_20785	4562498	4562890	-	DoxX family protein		gene	gene4160	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20785
RY45_20790	RY45_20790		RY45_20790	4562931	4563617	-	pirin		gene	gene4161	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20790
RY45_20795	RY45_20795		RY45_20795	4563648	4563980	-	hypothetical protein		gene	gene4162	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20795
RY45_20800	RY45_20800		RY45_20800	4564238	4565152	+	LysR family transcriptional regulator		gene	gene4163	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20800
RY45_20805	RY45_20805		RY45_20805	4565603	4566367	+	XRE family transcriptional regulator		gene	gene4164	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20805
RY45_20810	RY45_20810		RY45_20810	4566434	4567240	-	MFS transporter		gene	gene4165	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20810
RY45_20815	RY45_20815		RY45_20815	4567468	4568514	+	ABC transporter substrate-binding protein		gene	gene4166	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20815
RY45_20820	RY45_20820		RY45_20820	4568525	4569358	+	nucleotide pyrophosphatase		gene	gene4167	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20820
RY45_20825	RY45_20825		RY45_20825	4569358	4570257	+	ABC transporter permease		gene	gene4168	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20825
RY45_20830	RY45_20830		RY45_20830	4570250	4571026	+	ABC transporter permease		gene	gene4169	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20830
RY45_20835	RY45_20835		RY45_20835	4571033	4572040	+	ABC transporter ATP-binding protein		gene	gene4170	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20835
RY45_20840	RY45_20840		RY45_20840	4572080	4572739	+	hydrolase		gene	gene4171	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20840
RY45_20845	RY45_20845		RY45_20845	4572755	4574365	-	diguanylate cyclase		gene	gene4172	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20845
RY45_20850	RY45_20850		RY45_20850	4574475	4574915	+	membrane protein		gene	gene4173	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20850
RY45_20855	RY45_20855		RY45_20855	4575064	4575963	+	membrane protein		gene	gene4174	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20855
RY45_20860	RY45_20860		RY45_20860	4576156	4577013	-	AraC family transcriptional regulator		gene	gene4175	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20860
RY45_20865	RY45_20865		RY45_20865	4577010	4577495	-	GCN5 family acetyltransferase		gene	gene4176	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20865
RY45_20870	RY45_20870		RY45_20870	4577659	4579107	+	catalase		gene	gene4177	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20870
RY45_20875	RY45_20875		RY45_20875	4579579	4579905	-	hypothetical protein		gene	gene4178	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20875
RY45_20880	RY45_20880		RY45_20880	4580121	4581311	+	hypothetical protein		gene	gene4179	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20880
RY45_20885	RY45_20885		RY45_20885	4581470	4582243	+	amino acid ABC transporter substrate-binding protein		gene	gene4180	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20885
RY45_20890	RY45_20890		RY45_20890	4582297	4582677	-	hypothetical protein		gene	gene4181	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20890
RY45_20895	RY45_20895		RY45_20895	4582875	4584254	+	phosphatidic acid phosphatase		gene	gene4182	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20895
RY45_20900	RY45_20900		RY45_20900	4584251	4585336	+	hypothetical protein	YdiK%3B inner membrane protein%3B ydiK promoter presents a PurR sequence%2C suggesting that its expression is purine-regulated%3B unknown function	gene	gene4183	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20900
RY45_20905	RY45_20905		RY45_20905	4585581	4585979	-	transposase		gene	gene4184	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20905
RY45_20910	RY45_20910		RY45_20910	4586058	4586312	-	hypothetical protein		gene	gene4185	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20910
RY45_20915	RY45_20915		RY45_20915	4586598	4587716	-	agmatine deiminase		gene	gene4186	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20915
RY45_20920	RY45_20920		RY45_20920	4587884	4588777	+	LysR family transcriptional regulator		gene	gene4187	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20920
RY45_20925	RY45_20925		RY45_20925	4588866	4590755	+	transcriptional regulator		gene	gene4188	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20925
RY45_20930	RY45_20930	gldA	gldA	4590851	4591933	-	glycerol dehydrogenase	forms dimers and octamers%3B involved in conversion of glycerol to dihydroxy-acetone	gene	gene4189	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20930
RY45_20935	RY45_20935		RY45_20935	4592072	4592788	-	dihydroxyacetone kinase		gene	gene4190	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20935
RY45_20940	RY45_20940		RY45_20940	4592790	4593419	-	dihydroxyacetone kinase	with DhaK and DhaM catalyzes the phosphorylation of dihydroxyacetone	gene	gene4191	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20940
RY45_20945	RY45_20945		RY45_20945	4593435	4594505	-	dihydroxyacetone kinase	with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase	gene	gene4192	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20945
RY45_20950	RY45_20950		RY45_20950	4594702	4595664	-	transposase		gene	gene4193	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20950
RY45_20955	RY45_20955		RY45_20955	4595777	4597120	-	permase		gene	gene4194	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20955
RY45_20960	RY45_20960		RY45_20960	4597362	4597694	+	phosphoribosylaminoimidazole carboxylase		gene	gene4195	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20960
RY45_20965	RY45_20965		RY45_20965	4597788	4597864	-	tRNA-Asp		tRNA	gene4196	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20965
RY45_20970	RY45_20970		RY45_20970	4597963	4598077	-	5S ribosomal RNA		rRNA	gene4197	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20970
RY45_20975	RY45_20975		RY45_20975	4598182	4601095	-	23S ribosomal RNA		rRNA	gene4198	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20975
RY45_20980	RY45_20980		RY45_20980	4601326	4601401	-	tRNA-Glu		tRNA	gene4199	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20980
RY45_20985	RY45_20985		RY45_20985	4601597	4603154	-	16S ribosomal RNA		rRNA	gene4200	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20985
RY45_20990	RY45_20990		RY45_20990	4603551	4604093	-	D%2CD-heptose 1%2C7-bisphosphate phosphatase		gene	gene4201	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20990
RY45_20995	RY45_20995	tuf	tuf	4604206	4605390	-	elongation factor Tu	EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu	gene	gene4202	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_20995
RY45_21000	RY45_21000	fusA	fusA	4605445	4607551	-		disrupted	pseudogene	gene4203	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21000
RY45_21005	RY45_21005		RY45_21005	4607627	4608097	-	30S ribosomal protein S7		gene	gene4204	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21005
RY45_21010	RY45_21010	hypothetical protein	hypothetical protein	4608215	4608487	+		disrupted	pseudogene	gene4205	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21010
RY45_21015	RY45_21015		RY45_21015	4608749	4609027	-	sulfur relay protein TusB		gene	gene4206	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21015
RY45_21020	RY45_21020		RY45_21020	4609035	4609391	-	sulfur relay protein TusC		gene	gene4207	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21020
RY45_21025	RY45_21025		RY45_21025	4609401	4609793	-	sulfur transfer complex subunit TusD	in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs	gene	gene4208	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21025
RY45_21030	RY45_21030		RY45_21030	4609880	4610260	-	regulator		gene	gene4209	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21030
RY45_21035	RY45_21035		RY45_21035	4610286	4611002	-	hypothetical protein		gene	gene4210	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21035
RY45_21040	RY45_21040		RY45_21040	4611200	4615504	-	DNA-directed RNA polymerase subunit beta'	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter	gene	gene4211	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21040
RY45_21045	RY45_21045	rpoB	rpoB	4615596	4619624	-	DNA-directed RNA polymerase subunit beta	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme	gene	gene4212	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21045
RY45_21050	RY45_21050	rplL	rplL	4619849	4620214	-	50S ribosomal protein L7/L12	present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors	gene	gene4213	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21050
RY45_21055	RY45_21055	rplJ	rplJ	4620266	4620766	-	50S ribosomal protein L10	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit	gene	gene4214	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21055
RY45_21060	RY45_21060		RY45_21060	4621023	4621724	-	50S ribosomal protein L1		gene	gene4215	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21060
RY45_21065	RY45_21065		RY45_21065	4621729	4622157	-	50S ribosomal protein L11		gene	gene4216	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21065
RY45_21070	RY45_21070	nusG	nusG	4622291	4622842	-	transcription antiterminator NusG	Modulates Rho-dependent transcription termination	gene	gene4217	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21070
RY45_21075	RY45_21075		RY45_21075	4622852	4623223	-	preprotein translocase subunit SecE		gene	gene4218	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21075
RY45_21080	RY45_21080		RY45_21080	4623284	4623360	-	tRNA-Trp		tRNA	gene4219	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21080
RY45_21085	RY45_21085	tuf	tuf	4623414	4624598	-	elongation factor Tu	EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu	gene	gene4220	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21085
RY45_21090	RY45_21090		RY45_21090	4624770	4624844	-	tRNA-Gly		tRNA	gene4221	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21090
RY45_21095	RY45_21095		RY45_21095	4624883	4624967	-	tRNA-Tyr		tRNA	gene4222	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21095
RY45_21100	RY45_21100		RY45_21100	4625229	4626167	+	pantothenate kinase		gene	gene4223	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21100
RY45_21105	RY45_21105		RY45_21105	4626243	4627208	-	biotin--[acetyl-CoA-carboxylase] synthetase	catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon	gene	gene4224	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21105
RY45_21110	RY45_21110		RY45_21110	4627205	4628242	-	UDP-N-acetylenolpyruvoylglucosamine reductase		gene	gene4225	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21110
RY45_21115	RY45_21115		RY45_21115	4628370	4629023	+	potassium transporter KtrA		gene	gene4226	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21115
RY45_21120	RY45_21120		RY45_21120	4629020	4630375	+	Ktr system potassium transporter B		gene	gene4227	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21120
RY45_21125	RY45_21125		RY45_21125	4630453	4632444	-	DNA topoisomerase III	decatenates replicating daughter chromosomes	gene	gene4228	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21125
RY45_21130	RY45_21130		RY45_21130	4632809	4633939	+	cytochrome C		gene	gene4229	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21130
RY45_21135	RY45_21135		RY45_21135	4633962	4636442	+	trimethylamine N-oxide reductase I catalytic subunit	catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine	gene	gene4230	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21135
RY45_21140	RY45_21140		RY45_21140	4636594	4637055	-	hypothetical protein		gene	gene4231	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21140
RY45_21145	RY45_21145		RY45_21145	4637097	4638446	-	histidine kinase		gene	gene4232	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21145
RY45_21150	RY45_21150		RY45_21150	4638484	4639140	-	transcriptional regulator		gene	gene4233	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21150
RY45_21155	RY45_21155		RY45_21155	4639227	4639559	-	hypothetical protein		gene	gene4234	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21155
RY45_21160	RY45_21160		RY45_21160	4639623	4639868	+	hypothetical protein		gene	gene4235	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21160
RY45_21165	RY45_21165		RY45_21165	4639913	4640545	-	sulfite oxidase subunit YedZ	in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY%3B sulfite oxidase activity not demonstrated%3B contains heme	gene	gene4236	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21165
RY45_21170	RY45_21170		RY45_21170	4640565	4641566	-	TMAO/DMSO reductase	in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B requires inner membrane anchor protein YedZ	gene	gene4237	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21170
RY45_21175	RY45_21175		RY45_21175	4641937	4642419	+	membrane protein		gene	gene4238	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21175
RY45_21180	RY45_21180		RY45_21180	4642492	4643772	-	response regulator GlrR	with GlrK is part of a two-component signal transduction system regulating glmY	gene	gene4239	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21180
RY45_21185	RY45_21185		RY45_21185	4643769	4644284	-	hypothetical protein		gene	gene4240	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21185
RY45_21190	RY45_21190		RY45_21190	4644293	4645693	-	histidine kinase		gene	gene4241	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21190
RY45_21195	RY45_21195		RY45_21195	4646014	4646529	+	7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase		gene	gene4242	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21195
RY45_21200	RY45_21200		RY45_21200	4646532	4647236	-	pteridine reductase		gene	gene4243	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21200
RY45_21205	RY45_21205		RY45_21205	4647357	4647761	+	CBS domain containing protein		gene	gene4244	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21205
RY45_21210	RY45_21210		RY45_21210	4647758	4648294	-	hypothetical protein		gene	gene4245	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21210
RY45_21215	RY45_21215		RY45_21215	4648380	4649144	+	glutamine ABC transporter substrate-binding protein		gene	gene4246	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21215
RY45_21220	RY45_21220		RY45_21220	4649239	4649700	-	transcriptional regulator	transcriptional repressor of asnA which codes for aspartate-ammonia ligase	gene	gene4247	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21220
RY45_21225	RY45_21225		RY45_21225	4649854	4650846	+	asparagine synthetase AsnA	catalyzes the formation of asparagine from aspartate and ammonia	gene	gene4248	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21225
RY45_21230	RY45_21230		RY45_21230	4651057	4651881	-	metallo-beta-lactamase		gene	gene4249	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21230
RY45_21235	RY45_21235		RY45_21235	4651942	4654515	-	protein disaggregation chaperone		gene	gene4250	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21235
RY45_21240	RY45_21240		RY45_21240	4654894	4655631	-	hypothetical protein		gene	gene4251	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21240
RY45_21245	RY45_21245	rluD	rluD	4655817	4656797	-	23S rRNA pseudouridylate synthase	responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA	gene	gene4252	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21245
RY45_21250	RY45_21250		RY45_21250	4656915	4657670	+	membrane biogenesis protein		gene	gene4253	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21250
RY45_21255	RY45_21255		RY45_21255	4657811	4659139	-	CoA-disulfide reductase	CoADR%3B specific for coenzyme A disulfide%3B requires NADH%3B involved in protecting cells against reactive oxygen species by recycling coenzyme A disulfide which can reduce hydrogen peroxide	gene	gene4254	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21255
RY45_21260	RY45_21260		RY45_21260	4659236	4660636	-	sodium:dicarboxylate symporter		gene	gene4255	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21260
RY45_21265	RY45_21265		RY45_21265	4660802	4662109	-	membrane protein		gene	gene4256	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21265
RY45_21270	RY45_21270		RY45_21270	4662421	4663173	-	ABC transporter substrate-binding protein		gene	gene4257	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21270
RY45_21275	RY45_21275	pntB	pntB	4663269	4664753	-	pyridine nucleotide transhydrogenase	catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme	gene	gene4258	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21275
RY45_21280	RY45_21280	pntA	pntA	4664765	4666291	-	NAD(P) transhydrogenase subunit alpha	forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm	gene	gene4259	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21280
RY45_21285	RY45_21285		RY45_21285	4666799	4667962	-	aldehyde reductase		gene	gene4260	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21285
RY45_21290	RY45_21290		RY45_21290	4668109	4669011	+	AraC family transcriptional regulator		gene	gene4261	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21290
RY45_21295	RY45_21295		RY45_21295	4669029	4669541	+	lipocalin		gene	gene4262	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21295
RY45_21300	RY45_21300		RY45_21300	4669607	4671499	-	chemotaxis protein		gene	gene4263	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21300
RY45_21305	RY45_21305		RY45_21305	4671749	4673119	-	phosphatidylserine decarboxylase		gene	gene4264	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21305
RY45_21310	RY45_21310		RY45_21310	4673413	4673489	-	tRNA-Trp		tRNA	gene4265	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21310
RY45_21315	RY45_21315		RY45_21315	4673698	4674240	+	hypothetical protein		gene	gene4266	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21315
RY45_21320	RY45_21320		RY45_21320	4674514	4675434	+	aspartate carbamoyltransferase catalytic subunit		gene	gene4267	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21320
RY45_21325	RY45_21325		RY45_21325	4675451	4675915	+	aspartate carbamoyltransferase regulatory subunit	involved in the allosteric regulation of aspartate carbamoyltransferase	gene	gene4268	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21325
RY45_21330	RY45_21330		RY45_21330	4676133	4676624	+	ArgR family transcriptional regulator		gene	gene4269	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21330
RY45_21335	RY45_21335		RY45_21335	4676802	4678205	-	C4-dicarboxylate ABC transporter		gene	gene4270	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21335
RY45_21340	RY45_21340		RY45_21340	4678329	4679333	-	ornithine carbamoyltransferase	catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway	gene	gene4271	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21340
RY45_21345	RY45_21345		RY45_21345	4679411	4680337	-	carbamate kinase	reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP	gene	gene4272	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21345
RY45_21350	RY45_21350		RY45_21350	4680401	4681621	-	arginine deiminase	catalyzes the degradation of arginine to citruline and ammonia	gene	gene4273	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21350
RY45_21355	RY45_21355		RY45_21355	4682644	4683291	+	ParA family protein		gene	gene4274	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21355
RY45_21360	RY45_21360		RY45_21360	4683293	4683661	+	CopG family transcriptional regulator		gene	gene4275	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21360
RY45_21365	RY45_21365		RY45_21365	4684262	4685995	-	chemotaxis protein		gene	gene4276	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21365
RY45_21370	RY45_21370	mglC	mglC	4686047	4687057	-	beta-methylgalactoside transporter permease	ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex	gene	gene4277	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21370
RY45_21375	RY45_21375		RY45_21375	4687074	4688594	-	sugar ABC transporter ATP-binding protein		gene	gene4278	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21375
RY45_21380	RY45_21380		RY45_21380	4688649	4689635	-	sugar ABC transporter substrate-binding protein	wtih MglAC is involved in the transport of beta-methylgalactoside	gene	gene4279	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21380
RY45_21385	RY45_21385	lacZ	lacZ	4689869	4692946	-	beta-D-galactosidase	forms a homotetramer%3B hydrolyzes lactose disaccharide to galactose and glucose%3B converts lactose to allolactose which is the natural inducer of the lac operon	gene	gene4280	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21385
RY45_21390	RY45_21390		RY45_21390	4693165	4694169	-	transcriptional regulator	controls transcription of galETKM	gene	gene4281	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21390
RY45_21395	RY45_21395		RY45_21395	4694374	4695387	+	UDP-galactose-4-epimerase		gene	gene4282	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21395
RY45_21400	RY45_21400		RY45_21400	4695495	4696553	+	galactose-1-phosphate uridylyltransferase		gene	gene4283	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21400
RY45_21405	RY45_21405		RY45_21405	4696550	4697698	+	galactokinase	catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism	gene	gene4284	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21405
RY45_21410	RY45_21410		RY45_21410	4697763	4698755	+	galactose mutarotase		gene	gene4285	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21410
RY45_21415	RY45_21415		RY45_21415	4698941	4699951	+	L-glyceraldehyde 3-phosphate reductase		gene	gene4286	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21415
RY45_21420	RY45_21420		RY45_21420	4700144	4700959	+	UDP pyrophosphate phosphatase	BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell	gene	gene4287	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21420
RY45_21425	RY45_21425		RY45_21425	4701021	4701686	-	transcriptional regulator		gene	gene4288	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21425
RY45_21430	RY45_21430		RY45_21430	4701679	4702248	-	RNA polymerase sigma factor		gene	gene4289	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21430
RY45_21435	RY45_21435		RY45_21435	4702381	4702947	-	ATP-dependent protease		gene	gene4290	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21435
RY45_21440	RY45_21440		RY45_21440	4703261	4705006	+	arginyl-tRNA synthetase		gene	gene4291	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21440
RY45_21445	RY45_21445		RY45_21445	4705010	4705849	+	cell division protein		gene	gene4292	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21445
RY45_21450	RY45_21450		RY45_21450	4706037	4706570	+	hypothetical protein		gene	gene4293	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21450
RY45_21455	RY45_21455	hslU	hslU	4706663	4707991	+	ATP-dependent protease ATP-binding subunit HslU	heat shock protein involved in degradation of misfolded proteins	gene	gene4294	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21455
RY45_21460	RY45_21460		RY45_21460	4708084	4709508	-	major facilitator transporter		gene	gene4295	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21460
RY45_21465	RY45_21465		RY45_21465	4709677	4710588	+	LysR family transcriptional regulator		gene	gene4296	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21465
RY45_21470	RY45_21470		RY45_21470	4710876	4713422	+	nitrite reductase		gene	gene4297	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21470
RY45_21475	RY45_21475	nirD	nirD	4713422	4713739	+	nitrite reductase	involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations	gene	gene4298	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21475
RY45_21480	RY45_21480		RY45_21480	4713797	4714609	+	nitrite transporter NirC	member of the FNT family of formate and nitrite transporters	gene	gene4299	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21480
RY45_21485	RY45_21485	cysG	cysG	4714622	4716028	+	siroheme synthase	multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin	gene	gene4300	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21485
RY45_21490	RY45_21490		RY45_21490	4716161	4717585	+	dihydroorotate dehydrogenase		gene	gene4301	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21490
RY45_21495	RY45_21495		RY45_21495	4717643	4719496	-	chemotaxis protein		gene	gene4302	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21495
RY45_21500	RY45_21500		RY45_21500	4719643	4720128	+	regulator of ribonuclease activity A		gene	gene4303	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21500
RY45_21505	RY45_21505		RY45_21505	4720399	4721073	-	hypothetical protein		gene	gene4304	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21505
RY45_21510	RY45_21510		RY45_21510	4721204	4721491	-	hypothetical protein		gene	gene4305	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21510
RY45_21515	RY45_21515		RY45_21515	4721502	4722929	-	hypothetical protein		gene	gene4306	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21515
RY45_21520	RY45_21520		RY45_21520	4723033	4723332	+	cytochrome C		gene	gene4307	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21520
RY45_21525	RY45_21525		RY45_21525	4723429	4725264	-	ATP-dependent DNA helicase RecQ	functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway	gene	gene4308	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21525
RY45_21530	RY45_21530		RY45_21530	4725398	4725862	+	hypothetical protein		gene	gene4309	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21530
RY45_21535	RY45_21535		RY45_21535	4725987	4726514	+	hypothetical protein		gene	gene4310	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21535
RY45_21540	RY45_21540		RY45_21540	4726875	4726951	-	tRNA-Pro		tRNA	gene4311	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21540
RY45_21545	RY45_21545		RY45_21545	4727099	4727809	-	molybdenum cofactor sulfurase		gene	gene4312	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21545
RY45_21550	RY45_21550		RY45_21550	4727855	4728697	-	spermidine/putrescine ABC transporter permease		gene	gene4313	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21550
RY45_21555	RY45_21555		RY45_21555	4728694	4729599	-	spermidine/putrescine ABC transporter permease		gene	gene4314	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21555
RY45_21560	RY45_21560		RY45_21560	4729596	4730750	-	transporter		gene	gene4315	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21560
RY45_21565	RY45_21565		RY45_21565	4730826	4731911	-	spermidine/putrescine ABC transporter substrate-binding protein		gene	gene4316	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21565
RY45_21570	RY45_21570		RY45_21570	4732029	4733126	-	spermidine/putrescine ABC transporter substrate-binding protein		gene	gene4317	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21570
RY45_21575	RY45_21575		RY45_21575	4733181	4734542	-	aminotransferase		gene	gene4318	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21575
RY45_21580	RY45_21580		RY45_21580	4734729	4736060	-	glutamine synthetase		gene	gene4319	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21580
RY45_21585	RY45_21585		RY45_21585	4736529	4736915	+	molecular chaperone DnaK		gene	gene4320	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21585
RY45_21590	RY45_21590		RY45_21590	4737088	4737945	+	hypothetical protein		gene	gene4321	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21590
RY45_21595	RY45_21595		RY45_21595	4737997	4738443	+	hypothetical protein		gene	gene4322	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21595
RY45_21600	RY45_21600		RY45_21600	4738465	4738944	+	CreA		gene	gene4323	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21600
RY45_21605	RY45_21605		RY45_21605	4739022	4740011	+	lactate dehydrogenase	fermentative%3B catalyzes the formationof pyruvate from lactate	gene	gene4324	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21605
RY45_21610	RY45_21610		RY45_21610	4740103	4741482	+	chaperone		gene	gene4325	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21610
RY45_21615	RY45_21615		RY45_21615	4741636	4742055	+	heat shock protein HslJ		gene	gene4326	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21615
RY45_21620	RY45_21620		RY45_21620	4742126	4742974	+	hypothetical protein		gene	gene4327	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21620
RY45_21625	RY45_21625		RY45_21625	4742980	4744809	+	maltodextrin glucosidase		gene	gene4328	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21625
RY45_21630	RY45_21630		RY45_21630	4745031	4746035	+	UDP-N-acetylglucosamine 4%2C6-dehydratase		gene	gene4329	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21630
RY45_21635	RY45_21635		RY45_21635	4746032	4747159	+	spore coat protein		gene	gene4330	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21635
RY45_21640	RY45_21640		RY45_21640	4748510	4750834	-	phosphoenolpyruvate synthase		gene	gene4331	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21640
RY45_21645	RY45_21645		RY45_21645	4753700	4754191	-	hypothetical protein		gene	gene4332	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21645
RY45_21650	RY45_21650	UDP-galactopyranose mutase	UDP-galactopyranose mutase	4758528	4759670	-		disrupted	pseudogene	gene4333	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21650
RY45_21655	RY45_21655		RY45_21655	4759667	4760650	-	glycosyl transferase		gene	gene4334	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21655
RY45_21660	RY45_21660		RY45_21660	4760809	4761996	-	acyl-CoA reductase		gene	gene4335	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21660
RY45_21665	RY45_21665		RY45_21665	4761993	4763051	-	acyl-protein synthetase		gene	gene4336	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21665
RY45_21670	RY45_21670		RY45_21670	4763051	4764421	-	AMP-dependent synthetase		gene	gene4337	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21670
RY45_21675	RY45_21675		RY45_21675	4764421	4765170	-	3-oxoacyl-ACP reductase		gene	gene4338	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21675
RY45_21680	RY45_21680		RY45_21680	4765170	4765403	-	acyl carrier protein		gene	gene4339	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21680
RY45_21685	RY45_21685		RY45_21685	4765400	4765924	-	flagellar modification protein FlmH		gene	gene4340	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21685
RY45_21690	RY45_21690		RY45_21690	4766101	4766796	+	NeuA		gene	gene4341	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21690
RY45_21695	RY45_21695		RY45_21695	4766786	4768042	+	FlmD protein		gene	gene4342	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21695
RY45_21700	RY45_21700		RY45_21700	4768049	4769095	+	N-acetylneuraminate synthase		gene	gene4343	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21700
RY45_21705	RY45_21705		RY45_21705	4769088	4770383	+	motility accesory factor Maf-2		gene	gene4344	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21705
RY45_21710	RY45_21710		RY45_21710	4770380	4770640	+	hypothetical protein		gene	gene4345	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21710
RY45_21715	RY45_21715		RY45_21715	4770640	4771386	+	crotonobetainyl-CoA:carnitine CoA-transferase		gene	gene4346	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21715
RY45_21720	RY45_21720		RY45_21720	4771368	4772729	-	aminopeptidase		gene	gene4347	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21720
RY45_21725	RY45_21725		RY45_21725	4772726	4773130	-	glyoxalase		gene	gene4348	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21725
RY45_21730	RY45_21730		RY45_21730	4773120	4773884	-	aminoglycoside 3-N-acetyltransferase		gene	gene4349	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21730
RY45_21735	RY45_21735		RY45_21735	4773881	4774105	-	acyl carrier protein		gene	gene4350	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21735
RY45_21740	RY45_21740		RY45_21740	4774098	4775780	-	FkbH domain-containing protein		gene	gene4351	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21740
RY45_21745	RY45_21745		RY45_21745	4775878	4776411	-	ATP:cob(I)alamin adenosyltransferase		gene	gene4352	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21745
RY45_21750	RY45_21750		RY45_21750	4776499	4777641	-	hypothetical protein		gene	gene4353	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21750
RY45_21755	RY45_21755		RY45_21755	4777812	4778945	+	tRNA (uracil-5-)-methyltransferase	catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs	gene	gene4354	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21755
RY45_21760	RY45_21760		RY45_21760	4779185	4779895	+	transcriptional regulator	response regulator in two-component regulatory system with RstB	gene	gene4355	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21760
RY45_21765	RY45_21765		RY45_21765	4780013	4781338	+	histidine kinase		gene	gene4356	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21765
RY45_21770	RY45_21770		RY45_21770	4781393	4781575	+	hypothetical protein		gene	gene4357	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21770
RY45_21775	RY45_21775		RY45_21775	4781652	4782908	-	malate dehydrogenase		gene	gene4358	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21775
RY45_21780	RY45_21780		RY45_21780	4783090	4784523	-	nucleoside-diphosphate sugar epimerase		gene	gene4359	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21780
RY45_21785	RY45_21785	rpmE	rpmE	4784691	4784906	-	50S ribosomal protein L31	RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome	gene	gene4360	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21785
RY45_21790	RY45_21790		RY45_21790	4785072	4787261	+	primosomal protein N'		gene	gene4361	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21790
RY45_21795	RY45_21795		RY45_21795	4787341	4788465	-	hypothetical protein		gene	gene4362	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21795
RY45_21800	RY45_21800		RY45_21800	4788518	4789072	-	TetR family transcriptional regulator		gene	gene4363	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21800
RY45_21805	RY45_21805		RY45_21805	4789153	4789602	+	membrane protein		gene	gene4364	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21805
RY45_21810	RY45_21810		RY45_21810	4789653	4790759	-	membrane protein	OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d	gene	gene4365	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21810
RY45_21815	RY45_21815		RY45_21815	4791007	4792527	-	threonine dehydratase	threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway	gene	gene4366	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21815
RY45_21820	RY45_21820		RY45_21820	4792531	4794372	-	dihydroxy-acid dehydratase	catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis	gene	gene4367	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21820
RY45_21825	RY45_21825		RY45_21825	4794518	4795462	-	branched-chain amino acid aminotransferase		gene	gene4368	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21825
RY45_21830	RY45_21830		RY45_21830	4795475	4795726	-	acetolactate synthase		gene	gene4369	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21830
RY45_21835	RY45_21835		RY45_21835	4795723	4797369	-	acetolactate synthase catalytic subunit	catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit	gene	gene4370	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21835
RY45_21840	RY45_21840		RY45_21840	4797753	4799267	+	ATP-dependent protease	among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function	gene	gene4371	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21840
RY45_21845	RY45_21845		RY45_21845	4799388	4800302	+	acyltransferase		gene	gene4372	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21845
RY45_21850	RY45_21850		RY45_21850	4800296	4801252	+	acyltransferase		gene	gene4373	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21850
RY45_21855	RY45_21855		RY45_21855	4801198	4801683	-	hypothetical protein		gene	gene4374	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21855
RY45_21860	RY45_21860		RY45_21860	4801781	4802431	-	DNA mismatch repair protein MutT		gene	gene4375	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21860
RY45_21865	RY45_21865		RY45_21865	4802507	4803142	+	amidase		gene	gene4376	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21865
RY45_21870	RY45_21870		RY45_21870	4803244	4804422	+	nicotinate phosphoribosyltransferase	catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate	gene	gene4377	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21870
RY45_21875	RY45_21875		RY45_21875	4804547	4805392	+	phosphonate ABC transporter substrate-binding protein		gene	gene4378	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21875
RY45_21880	RY45_21880		RY45_21880	4805389	4806150	+	phosphonate ABC transporter		gene	gene4379	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21880
RY45_21885	RY45_21885		RY45_21885	4806150	4807685	+	phosphonate ABC transporter permease		gene	gene4380	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21885
RY45_21890	RY45_21890		RY45_21890	4807776	4808384	-	thiol:disulfide interchange protein		gene	gene4381	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21890
RY45_21895	RY45_21895		RY45_21895	4808522	4809511	-	serine/threonine protein kinase	catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages	gene	gene4382	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21895
RY45_21900	RY45_21900		RY45_21900	4809603	4811051	-	4Fe-4S ferredoxin		gene	gene4383	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21900
RY45_21905	RY45_21905		RY45_21905	4811251	4811514	-	hypothetical protein		gene	gene4384	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21905
RY45_21910	RY45_21910		RY45_21910	4811545	4812699	-	diguanylate cyclase		gene	gene4385	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21910
RY45_21915	RY45_21915		RY45_21915	4812826	4813215	-	transcriptional regulator	activator of copper-responsive regulon genes	gene	gene4386	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21915
RY45_21920	RY45_21920		RY45_21920	4813226	4815658	-	metal ABC transporter ATPase		gene	gene4387	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21920
RY45_21925	RY45_21925	pyrE	pyrE	4815836	4816489	-	orotate phosphoribosyltransferase	involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate	gene	gene4388	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21925
RY45_21930	RY45_21930	rph	rph	4816564	4817280	-	ribonuclease PH	RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs	gene	gene4389	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21930
RY45_21935	RY45_21935		RY45_21935	4817697	4818560	+	hypothetical protein		gene	gene4390	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21935
RY45_21940	RY45_21940		RY45_21940	4818727	4819794	+	ADP-heptose--LPS heptosyltransferase		gene	gene4391	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21940
RY45_21945	RY45_21945		RY45_21945	4819730	4820842	-	lipooligosaccharided-glycero-D-manno-heptosyltransferase		gene	gene4392	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21945
RY45_21950	RY45_21950		RY45_21950	4820898	4821926	-	heptosyltransferase		gene	gene4393	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21950
RY45_21955	RY45_21955		RY45_21955	4822009	4822674	-	beta-1%2C4-galactosyltransferase		gene	gene4394	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21955
RY45_21960	RY45_21960		RY45_21960	4822671	4823882	-	polymerase		gene	gene4395	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21960
RY45_21965	RY45_21965		RY45_21965	4823886	4825649	-	polysaccharide deacetylase		gene	gene4396	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21965
RY45_21970	RY45_21970		RY45_21970	4825759	4826715	-	ADP-L-glycero-D-manno-heptose-6-epimerase		gene	gene4397	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21970
RY45_21975	RY45_21975		RY45_21975	4826872	4827516	+	TetR family transcriptional regulator		gene	gene4398	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21975
RY45_21980	RY45_21980		RY45_21980	4827632	4828822	+	2-amino-3-ketobutyrate CoA ligase	catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine	gene	gene4399	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21980
RY45_21985	RY45_21985	tdh	tdh	4828879	4829907	+	L-threonine 3-dehydrogenase	converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism	gene	gene4400	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21985
RY45_21990	RY45_21990		RY45_21990	4830108	4830563	+	cytochrome C		gene	gene4401	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21990
RY45_21995	RY45_21995		RY45_21995	4830649	4832934	+	diguanylate phosphodiesterase		gene	gene4402	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_21995
RY45_22000	RY45_22000		RY45_22000	4832942	4834954	-	ATP-dependent DNA helicase Rep	single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication	gene	gene4403	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22000
RY45_22005	RY45_22005		RY45_22005	4835107	4836327	+	cysteine sulfinate desulfinase		gene	gene4404	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22005
RY45_22010	RY45_22010		RY45_22010	4836341	4836778	+	SufE protein		gene	gene4405	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22010
RY45_22015	RY45_22015		RY45_22015	4836789	4837625	-	sulfur acceptor protein CsdL	accepts sulfur from CsdA	gene	gene4406	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22015
RY45_22020	RY45_22020		RY45_22020	4837773	4837849	-	tRNA-Asp		tRNA	gene4407	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22020
RY45_22025	RY45_22025		RY45_22025	4837948	4838062	-	5S ribosomal RNA		rRNA	gene4408	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22025
RY45_22030	RY45_22030		RY45_22030	4838125	4841041	-	23S ribosomal RNA		rRNA	gene4409	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22030
RY45_22035	RY45_22035		RY45_22035	4841274	4841349	-	tRNA-Ala		tRNA	gene4410	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22035
RY45_22040	RY45_22040		RY45_22040	4841360	4841436	-	tRNA-Ile		tRNA	gene4411	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22040
RY45_22045	RY45_22045		RY45_22045	4841503	4843057	-	16S ribosomal RNA		rRNA	gene4412	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22045
RY45_22050	RY45_22050		RY45_22050	4843463	4844641	-	hypothetical protein		gene	gene4413	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22050
RY45_22055	RY45_22055		RY45_22055	4844644	4845306	-	energy transducer TonB		gene	gene4414	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22055
RY45_22060	RY45_22060		RY45_22060	4845303	4845704	-	biopolymer transporter ExbD		gene	gene4415	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22060
RY45_22065	RY45_22065		RY45_22065	4845701	4846231	-	biopolymer transporter ExbB		gene	gene4416	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22065
RY45_22070	RY45_22070		RY45_22070	4846228	4847535	-	energy transducer TonB		gene	gene4417	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22070
RY45_22075	RY45_22075		RY45_22075	4847532	4848293	-	chromosome partitioning protein ParA		gene	gene4418	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22075
RY45_22080	RY45_22080		RY45_22080	4848503	4849279	+	transcriptional regulator		gene	gene4419	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22080
RY45_22085	RY45_22085		RY45_22085	4849344	4851176	-	glucosamine--fructose-6-phosphate aminotransferase	Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source	gene	gene4420	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22085
RY45_22090	RY45_22090		RY45_22090	4851232	4852005	-	XRE family transcriptional regulator		gene	gene4421	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22090
RY45_22095	RY45_22095		RY45_22095	4852129	4852803	+	transcriptional regulator	response regulator in two-component regulatory system with CreC%3B CreB protein is phosphorylated by sensor protein phospho-CreC%3B involved in catabolic regulation	gene	gene4422	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22095
RY45_22100	RY45_22100		RY45_22100	4852838	4854259	+	histidine kinase	part of a two-component regulatory system with CreB or PhoB%3B involved in catabolic regulation	gene	gene4423	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22100
RY45_22105	RY45_22105		RY45_22105	4854335	4855129	+	beta-lactamase		gene	gene4424	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22105
RY45_22110	RY45_22110		RY45_22110	4855247	4856608	+	membrane protein		gene	gene4425	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22110
RY45_22115	RY45_22115	glmU	glmU	4856659	4858020	-	bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis	gene	gene4426	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22115
RY45_22120	RY45_22120	atpC	atpC	4858115	4858543	-	ATP synthase F0F1 subunit epsilon	part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane	gene	gene4427	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22120
RY45_22125	RY45_22125		RY45_22125	4858562	4859950	-	ATP synthase F0F1 subunit beta		gene	gene4428	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22125
RY45_22130	RY45_22130		RY45_22130	4859984	4860850	-	ATP F0F1 synthase subunit gamma	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit	gene	gene4429	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22130
RY45_22135	RY45_22135		RY45_22135	4860894	4862435	-	ATP F0F1 synthase subunit alpha	produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit	gene	gene4430	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22135
RY45_22140	RY45_22140		RY45_22140	4862451	4862984	-	ATP F0F1 synthase subunit delta	Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex	gene	gene4431	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22140
RY45_22145	RY45_22145		RY45_22145	4862998	4863468	-	ATP F0F1 synthase subunit B	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.	gene	gene4432	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22145
RY45_22150	RY45_22150		RY45_22150	4863521	4863763	-	ATP F0F1 synthase subunit C	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0	gene	gene4433	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22150
RY45_22155	RY45_22155		RY45_22155	4863822	4864604	-	ATP synthase F0F1 subunit A	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0	gene	gene4434	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22155
RY45_22160	RY45_22160		RY45_22160	4864613	4865023	-	ATP synthase F0 subunit I		gene	gene4435	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22160
RY45_22165	RY45_22165		RY45_22165	4865214	4866122	-	chromosome partitioning protein ParB		gene	gene4436	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22165
RY45_22170	RY45_22170		RY45_22170	4866119	4866922	-	cobalamin biosynthesis protein CobQ		gene	gene4437	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22170
RY45_22175	RY45_22175		RY45_22175	4866949	4867575	-	16S rRNA methyltransferase		gene	gene4438	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22175
RY45_22180	RY45_22180	gidA	gidA	4867596	4869485	-	tRNA uridine 5-carboxymethylaminomethyl modification protein	GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs	gene	gene4439	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22180
RY45_22185	RY45_22185		RY45_22185	4869995	4870444	-	sulfite reductase		gene	gene4440	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22185
RY45_22190	RY45_22190		RY45_22190	4870828	4872936	+	ligand-gated channel		gene	gene4441	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22190
RY45_22195	RY45_22195		RY45_22195	4873016	4874674	+	multidrug transporter membrane component/ATP-binding component	efflux pump for the antibacterial peptide microcin J25	gene	gene4442	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22195
RY45_22200	RY45_22200		RY45_22200	4874697	4875461	+	iron-hydroxamate transporter ATP-binding subunit	part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter	gene	gene4443	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22200
RY45_22205	RY45_22205		RY45_22205	4875480	4876403	+	ABC transporter substrate-binding protein		gene	gene4444	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22205
RY45_22210	RY45_22210		RY45_22210	4876403	4878385	+	iron ABC transporter		gene	gene4445	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22210
RY45_22215	RY45_22215	trmE	trmE	4878457	4879818	-	tRNA modification GTPase TrmE	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE	gene	gene4446	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22215
RY45_22220	RY45_22220		RY45_22220	4879928	4881574	-	membrane protein insertase	functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria	gene	gene4447	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22220
RY45_22225	RY45_22225		RY45_22225	4881795	4882154	-	ribonuclease P		gene	gene4448	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22225
RY45_22230	RY45_22230	rpmH	rpmH	4882154	4882288	-	50S ribosomal protein L34	in Escherichia coli transcription of this gene is enhanced by polyamines	gene	gene4449	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22230
RY45_22235	RY45_22235		RY45_22235	4882558	4883292	-	amino acid ABC transporter ATP-binding protein		gene	gene4450	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22235
RY45_22240	RY45_22240		RY45_22240	4883305	4883970	-	ABC transporter permease		gene	gene4451	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22240
RY45_22245	RY45_22245		RY45_22245	4883974	4884732	-	amino acid ABC transporter substrate-binding protein		gene	gene4452	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22245
RY45_22250	RY45_22250		RY45_22250	2097182	2097310	-	RtT RNA		ncRNA	gene1943	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22250
RY45_22255	RY45_22255		RY45_22255	2131424	2131552	+	RtT RNA		ncRNA	gene1985	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22255
RY45_22260	RY45_22260		RY45_22260	2918141	2918269	-	RtT RNA		ncRNA	gene2636	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22260
RY45_22265	RY45_22265		RY45_22265	4474209	4474595	-	bacterial RNase P		gene	gene4076	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22265
RY45_22270	RY45_22270		RY45_22270	418	660	+	plasmid replication protein RepB		gene	gene4453	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22270
RY45_22275	RY45_22275		RY45_22275	1232	1666	+	lipoprotein		gene	gene4454	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22275
RY45_22280	RY45_22280		RY45_22280	1777	2787	-	recombinase		gene	gene4455	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22280
RY45_22285	RY45_22285	hypothetical protein	hypothetical protein	3	251	+		disrupted	pseudogene	gene4456	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22285
RY45_22290	RY45_22290		RY45_22290	389	628	+	helix-turn-helix protein%2C CopG		gene	gene4457	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22290
RY45_22295	RY45_22295		RY45_22295	618	902	+	plasmid stabilization protein		gene	gene4458	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22295
RY45_22300	RY45_22300		RY45_22300	1865	2812	+	replicase		gene	gene4459	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22300
RY45_22305	RY45_22305		RY45_22305	2962	3252	-	hypothetical protein		gene	gene4460	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22305
RY45_22310	RY45_22310		RY45_22310	3465	3866	+	mobilization protein		gene	gene4461	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22310
RY45_22315	RY45_22315		RY45_22315	4571	5272	+	hypothetical protein		gene	gene4462	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22315
RY45_22320	RY45_22320		RY45_22320	5273	5614	+	hypothetical protein		gene	gene4463	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22320
RY45_22325	RY45_22325		RY45_22325	344	541	-	plasmid partition protein ParB		gene	gene4464	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22325
RY45_22330	RY45_22330		RY45_22330	562	1191	-	peptide transporter		gene	gene4465	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22330
RY45_22335	RY45_22335		RY45_22335	2246	2533	-	RelE toxin		gene	gene4466	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22335
RY45_22340	RY45_22340		RY45_22340	3283	3534	-	hypothetical protein		gene	gene4467	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22340
RY45_22345	RY45_22345	hypothetical protein	hypothetical protein	3870	4193	-		disrupted	pseudogene	gene4468	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22345
RY45_22350	RY45_22350	hypothetical protein	hypothetical protein	5848	6405	-		disrupted	pseudogene	gene4469	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22350
RY45_22355	RY45_22355		RY45_22355	6613	6855	+	plasmid replication protein RepB		gene	gene4470	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22355
RY45_22360	RY45_22360		RY45_22360	6870	7079	+	hypothetical protein		gene	gene4471	http://www.ncbi.nlm.nih.gov/gene/?term=RY45_22360