V428_00005 SM00382 ATPases associated with a variety of cellular activities V428_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain V428_00010 SM00480 DNA polymerase III beta subunit V428_00020 SM00387 Histidine kinase-like ATPases V428_00020 SM00433 TopoisomeraseII V428_00055 SM00342 helix_turn_helix, arabinose operon control protein V428_00065 SM00448 cheY-homologous receiver domain V428_00065 SM00862 Transcriptional regulatory protein, C terminal V428_00070 SM00387 Histidine kinase-like ATPases V428_00070 SM00388 His Kinase A (phosphoacceptor) domain V428_00100 SM00091 PAS domain V428_00100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_00100 SM00387 Histidine kinase-like ATPases V428_00140 SM00458 Ricin-type beta-trefoil V428_00160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_00160 SM00387 Histidine kinase-like ATPases V428_00160 SM00388 His Kinase A (phosphoacceptor) domain V428_00165 SM00448 cheY-homologous receiver domain V428_00195 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_00195 SM00954 Region found in RelA / SpoT proteins V428_00200 SM01409 V428_00200 V428_00205 SM00072 Guanylate kinase homologues. V428_00220 SM00267 diguanylate cyclase V428_00265 SM00267 diguanylate cyclase V428_00305 SM00487 DEAD-like helicases superfamily V428_00390 SM00421 helix_turn_helix, Lux Regulon V428_00390 SM00448 cheY-homologous receiver domain V428_00395 SM00062 Bacterial periplasmic substrate-binding proteins V428_00395 SM00387 Histidine kinase-like ATPases V428_00395 SM00388 His Kinase A (phosphoacceptor) domain V428_00395 SM00448 cheY-homologous receiver domain V428_00405 SM00387 Histidine kinase-like ATPases V428_00410 SM00448 cheY-homologous receiver domain V428_00410 SM00850 LytTr DNA-binding domain V428_00425 SM01001 AIR carboxylase V428_00455 SM00360 RNA recognition motif V428_00535 SM01004 Delta-aminolevulinic acid dehydratase V428_00545 SM00052 Putative diguanylate phosphodiesterase V428_00545 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_00545 SM00091 PAS domain V428_00545 SM00267 diguanylate cyclase V428_00570 SM00487 DEAD-like helicases superfamily V428_00570 SM00490 helicase superfamily c-terminal domain V428_00580 SM00357 Cold shock protein domain V428_00580 SM00382 ATPases associated with a variety of cellular activities V428_00580 SM00959 Rho termination factor, N-terminal domain V428_00615 SM00450 Rhodanese Homology Domain V428_00625 SM00342 helix_turn_helix, arabinose operon control protein V428_00630 SM00382 ATPases associated with a variety of cellular activities V428_00635 SM00382 ATPases associated with a variety of cellular activities V428_00655 SM00354 helix_turn _helix lactose operon repressor V428_00670 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_00670 SM00866 V428_00670 V428_00675 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V428_00675 SM00382 ATPases associated with a variety of cellular activities V428_00680 SM00849 Metallo-beta-lactamase superfamily V428_00735 SM00836 DALR anticodon binding domain V428_00780 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_00780 SM00387 Histidine kinase-like ATPases V428_00780 SM00388 His Kinase A (phosphoacceptor) domain V428_00785 SM00448 cheY-homologous receiver domain V428_00785 SM00862 Transcriptional regulatory protein, C terminal V428_00845 SM00881 CoA binding domain V428_00920 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain V428_00920 SM01232 V428_00920 V428_00970 SM00354 helix_turn _helix lactose operon repressor V428_00975 SM00829 Enoylreductase V428_01010 SM00563 Phosphate acyltransferases V428_01040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_01040 SM00387 Histidine kinase-like ATPases V428_01040 SM00388 His Kinase A (phosphoacceptor) domain V428_01045 SM00448 cheY-homologous receiver domain V428_01045 SM00862 Transcriptional regulatory protein, C terminal V428_01055 SM00971 Serine acetyltransferase, N-terminal V428_01075 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs V428_01075 SM00474 3'-5' exonuclease V428_01075 SM00475 5'-3' exonuclease V428_01075 SM00482 DNA polymerase A domain V428_01120 SM00354 helix_turn _helix lactose operon repressor V428_01125 SM01038 Beta galactosidase small chain V428_01170 SM00829 Enoylreductase V428_01195 SM00382 ATPases associated with a variety of cellular activities V428_01215 SM01321 V428_01215 V428_01275 SM00831 Cation transporter/ATPase, N-terminus V428_01285 SM00342 helix_turn_helix, arabinose operon control protein V428_01305 SM00530 Helix-turn-helix XRE-family like proteins V428_01325 SM01002 Alanine dehydrogenase/PNT, C-terminal domain V428_01325 SM01003 Alanine dehydrogenase/PNT, N-terminal domain V428_01380 SM00257 Lysin motif V428_01400 SM01001 AIR carboxylase V428_01450 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_01460 SM00382 ATPases associated with a variety of cellular activities V428_01460 SM00448 cheY-homologous receiver domain V428_01465 SM00091 PAS domain V428_01465 SM00387 Histidine kinase-like ATPases V428_01465 SM00388 His Kinase A (phosphoacceptor) domain V428_01475 SM01230 V428_01475 V428_01510 SM00487 DEAD-like helicases superfamily V428_01510 SM00490 helicase superfamily c-terminal domain V428_01515 SM00155 Phospholipase D. Active site motifs. V428_01540 SM00354 helix_turn _helix lactose operon repressor V428_01560 SM00450 Rhodanese Homology Domain V428_01605 SM00316 Ribosomal protein S1-like RNA-binding domain V428_01605 SM00732 Likely ribonuclease with RNase H fold. V428_01615 SM00448 cheY-homologous receiver domain V428_01615 SM00862 Transcriptional regulatory protein, C terminal V428_01620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_01620 SM00387 Histidine kinase-like ATPases V428_01620 SM00388 His Kinase A (phosphoacceptor) domain V428_01630 SM01403 V428_01630 V428_01650 SM01382 V428_01650 V428_01650 SM01383 V428_01650 V428_01665 SM00322 K homology RNA-binding domain V428_01685 SM01374 V428_01685 V428_01750 SM00363 S4 RNA-binding domain V428_01750 SM01390 V428_01750 V428_01755 SM00662 RNA polymerases D V428_01825 SM00822 V428_01825 V428_01925 SM00062 Bacterial periplasmic substrate-binding proteins V428_01935 SM00155 Phospholipase D. Active site motifs. V428_01965 SM00382 ATPases associated with a variety of cellular activities V428_01965 SM00962 SRP54-type protein, GTPase domain V428_01965 SM00963 SRP54-type protein, helical bundle domain V428_01970 SM00382 ATPases associated with a variety of cellular activities V428_01985 SM00947 Carbonic anhydrase V428_01990 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_01990 SM00866 V428_01990 V428_02020 SM00052 Putative diguanylate phosphodiesterase V428_02025 SM00052 Putative diguanylate phosphodiesterase V428_02025 SM00267 diguanylate cyclase V428_02055 SM00965 Secretin and TonB N terminus short domain V428_02070 SM00382 ATPases associated with a variety of cellular activities V428_02140 SM00316 Ribosomal protein S1-like RNA-binding domain V428_02150 SM00886 Stress responsive A/B Barrel Domain V428_02210 SM00448 cheY-homologous receiver domain V428_02210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_02215 SM00387 Histidine kinase-like ATPases V428_02215 SM00388 His Kinase A (phosphoacceptor) domain V428_02215 SM00448 cheY-homologous receiver domain V428_02220 SM00331 Sigma factor PP2C-like phosphatases V428_02220 SM00387 Histidine kinase-like ATPases V428_02230 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_02230 SM00091 PAS domain V428_02235 SM00342 helix_turn_helix, arabinose operon control protein V428_02280 SM00862 Transcriptional regulatory protein, C terminal V428_02370 SM01018 B12 binding domain V428_02385 SM00388 His Kinase A (phosphoacceptor) domain V428_02390 SM00448 cheY-homologous receiver domain V428_02390 SM00862 Transcriptional regulatory protein, C terminal V428_02405 SM00999 Aerolysin toxin V428_02435 SM00876 Biotin and Thiamin Synthesis associated domain V428_02465 SM00267 diguanylate cyclase V428_02575 SM01219 V428_02575 V428_02610 SM00100 Cyclic nucleotide-monophosphate binding domain V428_02640 SM00382 ATPases associated with a variety of cellular activities V428_02655 SM00852 Probable molybdopterin binding domain V428_02675 SM00344 helix_turn_helix ASNC type V428_02695 SM00642 Alpha-amylase domain V428_02840 SM00862 Transcriptional regulatory protein, C terminal V428_02850 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain V428_02900 SM00487 DEAD-like helicases superfamily V428_02900 SM00490 helicase superfamily c-terminal domain V428_02985 SM00357 Cold shock protein domain V428_02985 SM00955 V428_02985 V428_03000 SM00421 helix_turn_helix, Lux Regulon V428_03035 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_03035 SM00895 V428_03035 V428_03050 SM00363 S4 RNA-binding domain V428_03065 SM00382 ATPases associated with a variety of cellular activities V428_03120 SM00421 helix_turn_helix, Lux Regulon V428_03155 SM00342 helix_turn_helix, arabinose operon control protein V428_03190 SM00859 Semialdehyde dehydrogenase, NAD binding domain V428_03235 SM01266 V428_03235 V428_03265 SM00382 ATPases associated with a variety of cellular activities V428_03285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_03285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_03285 SM01049 V428_03285 V428_03315 SM00245 tail specific protease V428_03395 SM00487 DEAD-like helicases superfamily V428_03395 SM00490 helicase superfamily c-terminal domain V428_03415 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_03485 SM00938 Nitrogen regulatory protein P-II V428_03500 SM00382 ATPases associated with a variety of cellular activities V428_03515 SM00382 ATPases associated with a variety of cellular activities V428_03520 SM00062 Bacterial periplasmic substrate-binding proteins V428_03520 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. V428_03540 SM00671 Sel1-like repeats. V428_03555 SM01091 Transporter associated domain V428_03565 SM00382 ATPases associated with a variety of cellular activities V428_03565 SM00962 SRP54-type protein, GTPase domain V428_03565 SM00963 SRP54-type protein, helical bundle domain V428_03595 SM00927 DNA mismatch repair enzyme MutH V428_03605 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V428_03635 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor V428_03650 SM00904 Riboflavin kinase V428_03735 SM00938 Nitrogen regulatory protein P-II V428_03750 SM00267 diguanylate cyclase V428_03755 SM00316 Ribosomal protein S1-like RNA-binding domain V428_03755 SM00357 Cold shock protein domain V428_03755 SM00955 V428_03755 V428_03760 SM00967 RNA 2'-O ribose methyltransferase substrate binding V428_03830 SM00829 Enoylreductase V428_03875 SM00382 ATPases associated with a variety of cellular activities V428_03880 SM00327 von Willebrand factor (vWF) type A domain V428_03885 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_03885 SM00091 PAS domain V428_03885 SM00267 diguanylate cyclase V428_03890 SM00028 Tetratricopeptide repeats V428_03890 SM00267 diguanylate cyclase V428_03905 SM00347 helix_turn_helix multiple antibiotic resistance protein V428_03915 SM00347 helix_turn_helix multiple antibiotic resistance protein V428_03960 SM00849 Metallo-beta-lactamase superfamily V428_03970 SM00487 DEAD-like helicases superfamily V428_03970 SM00490 helicase superfamily c-terminal domain V428_04055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_04055 SM00387 Histidine kinase-like ATPases V428_04055 SM00388 His Kinase A (phosphoacceptor) domain V428_04060 SM00448 cheY-homologous receiver domain V428_04060 SM00862 Transcriptional regulatory protein, C terminal V428_04070 SM00382 ATPases associated with a variety of cellular activities V428_04075 SM00062 Bacterial periplasmic substrate-binding proteins V428_04080 SM00382 ATPases associated with a variety of cellular activities V428_04130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_04130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_04140 SM00287 Bacterial SH3 domain homologues V428_04165 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain V428_04265 SM00358 Double-stranded RNA binding motif V428_04265 SM00535 Ribonuclease III family V428_04330 SM00420 helix_turn_helix, Deoxyribose operon repressor V428_04330 SM01134 V428_04330 V428_04335 SM00644 V428_04335 V428_04345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_04345 SM00387 Histidine kinase-like ATPases V428_04345 SM00388 His Kinase A (phosphoacceptor) domain V428_04345 SM00448 cheY-homologous receiver domain V428_04355 SM00954 Region found in RelA / SpoT proteins V428_04370 SM01192 V428_04370 V428_04370 SM01193 V428_04370 V428_04410 SM00257 Lysin motif V428_04435 SM00400 zinc finger V428_04435 SM00493 V428_04435 V428_04435 SM00766 DNA primase DnaG DnaB-binding V428_04455 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins V428_04455 SM00632 V428_04455 V428_04455 SM00642 Alpha-amylase domain V428_04470 SM01209 V428_04470 V428_04470 SM01210 V428_04470 V428_04475 SM00798 AICARFT/IMPCHase bienzyme V428_04475 SM00851 MGS-like domain V428_04480 SM00422 helix_turn_helix, mercury resistance V428_04495 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_04575 SM00883 Chaperonin 10 Kd subunit V428_04590 SM00052 Putative diguanylate phosphodiesterase V428_04590 SM00267 diguanylate cyclase V428_04605 SM00487 DEAD-like helicases superfamily V428_04605 SM00490 helicase superfamily c-terminal domain V428_04645 SM00670 Large family of predicted nucleotide-binding domains V428_04650 SM00382 ATPases associated with a variety of cellular activities V428_04685 SM01329 V428_04685 V428_04690 SM00917 LeuA allosteric (dimerisation) domain V428_04700 SM00014 Acid phosphatase homologues V428_04755 SM01130 V428_04755 V428_04800 SM00073 Histidine Phosphotransfer domain V428_04800 SM00091 PAS domain V428_04800 SM00387 Histidine kinase-like ATPases V428_04800 SM00388 His Kinase A (phosphoacceptor) domain V428_04800 SM00448 cheY-homologous receiver domain V428_04805 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_04815 SM00062 Bacterial periplasmic substrate-binding proteins V428_04815 SM00073 Histidine Phosphotransfer domain V428_04815 SM00091 PAS domain V428_04815 SM00387 Histidine kinase-like ATPases V428_04815 SM00388 His Kinase A (phosphoacceptor) domain V428_04815 SM00448 cheY-homologous receiver domain V428_04820 SM00052 Putative diguanylate phosphodiesterase V428_04820 SM00448 cheY-homologous receiver domain V428_04825 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_04825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_04830 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. V428_04845 SM00382 ATPases associated with a variety of cellular activities V428_04845 SM00930 V428_04845 V428_04875 SM00257 Lysin motif V428_04875 SM00646 V428_04875 V428_04885 SM00853 MutL C terminal dimerisation domain V428_04885 SM01340 V428_04885 V428_04905 SM00244 prohibitin homologues V428_04910 SM00244 prohibitin homologues V428_04960 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_04970 SM00530 Helix-turn-helix XRE-family like proteins V428_04985 SM00650 Ribosomal RNA adenine dimethylases V428_05015 SM00271 DnaJ molecular chaperone homology domain V428_05030 SM00382 ATPases associated with a variety of cellular activities V428_05155 SM00382 ATPases associated with a variety of cellular activities V428_05165 SM00382 ATPases associated with a variety of cellular activities V428_05195 SM00507 HNH nucleases V428_05360 SM01133 V428_05360 V428_05380 SM00382 ATPases associated with a variety of cellular activities V428_05430 SM00530 Helix-turn-helix XRE-family like proteins V428_05440 SM00387 Histidine kinase-like ATPases V428_05440 SM00388 His Kinase A (phosphoacceptor) domain V428_05440 SM00448 cheY-homologous receiver domain V428_05445 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins V428_05445 SM00495 Chitin-binding domain type 3 V428_05445 SM00636 V428_05445 V428_05455 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins V428_05455 SM00495 Chitin-binding domain type 3 V428_05465 SM00100 Cyclic nucleotide-monophosphate binding domain V428_05465 SM00419 helix_turn_helix, cAMP Regulatory protein V428_05525 SM00984 UDP binding domain V428_05535 SM00267 diguanylate cyclase V428_05545 SM00260 Two component signalling adaptor domain V428_05545 SM00448 cheY-homologous receiver domain V428_05570 SM00320 WD40 repeats V428_05580 SM00382 ATPases associated with a variety of cellular activities V428_05580 SM00448 cheY-homologous receiver domain V428_05605 SM00052 Putative diguanylate phosphodiesterase V428_05610 SM00978 V428_05610 V428_05620 SM00382 ATPases associated with a variety of cellular activities V428_05625 SM01005 Alanine racemase, C-terminal domain V428_05645 SM00052 Putative diguanylate phosphodiesterase V428_05675 SM00448 cheY-homologous receiver domain V428_05685 SM00138 Methyltransferase, chemotaxis proteins V428_05690 SM00091 PAS domain V428_05690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_05690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_05695 SM00260 Two component signalling adaptor domain V428_05700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_05700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_05705 SM00073 Histidine Phosphotransfer domain V428_05705 SM00260 Two component signalling adaptor domain V428_05705 SM00387 Histidine kinase-like ATPases V428_05705 SM01231 V428_05705 V428_05715 SM00448 cheY-homologous receiver domain V428_05720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_05750 SM00342 helix_turn_helix, arabinose operon control protein V428_05750 SM00478 endonuclease III V428_05750 SM01009 AlkA N-terminal domain V428_05765 SM00463 Small MutS-related domain V428_05795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_05795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_05850 SM00382 ATPases associated with a variety of cellular activities V428_05865 SM00100 Cyclic nucleotide-monophosphate binding domain V428_05865 SM00419 helix_turn_helix, cAMP Regulatory protein V428_05880 SM00382 ATPases associated with a variety of cellular activities V428_05905 SM00342 helix_turn_helix, arabinose operon control protein V428_05925 SM00487 DEAD-like helicases superfamily V428_05930 SM00487 DEAD-like helicases superfamily V428_05930 SM00490 helicase superfamily c-terminal domain V428_05950 SM00487 DEAD-like helicases superfamily V428_05950 SM00490 helicase superfamily c-terminal domain V428_06020 SM00530 Helix-turn-helix XRE-family like proteins V428_06060 SM00830 Chorismate mutase type II V428_06095 SM00422 helix_turn_helix, mercury resistance V428_06185 SM00421 helix_turn_helix, Lux Regulon V428_06290 SM00900 V428_06290 V428_06330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_06330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_06360 SM01329 V428_06360 V428_06365 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs V428_06365 SM00475 5'-3' exonuclease V428_06375 SM00267 diguanylate cyclase V428_06380 SM00028 Tetratricopeptide repeats V428_06460 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_06510 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. V428_06520 SM00935 Outer membrane protein (OmpH-like) V428_06550 SM00481 DNA polymerase alpha chain like domain V428_06560 SM00862 Transcriptional regulatory protein, C terminal V428_06595 SM00849 Metallo-beta-lactamase superfamily V428_06615 SM00382 ATPases associated with a variety of cellular activities V428_06630 SM00977 TilS substrate C-terminal domain V428_06635 SM00267 diguanylate cyclase V428_06660 SM00421 helix_turn_helix, Lux Regulon V428_06660 SM00448 cheY-homologous receiver domain V428_06670 SM00642 Alpha-amylase domain V428_06695 SM00062 Bacterial periplasmic substrate-binding proteins V428_06730 SM00771 ZipA, C-terminal domain (FtsZ-binding) V428_06735 SM00278 Helix-hairpin-helix DNA-binding motif class 1 V428_06735 SM00292 breast cancer carboxy-terminal domain V428_06735 SM00532 Ligase N family V428_06770 SM00062 Bacterial periplasmic substrate-binding proteins V428_06785 SM00347 helix_turn_helix multiple antibiotic resistance protein V428_06800 SM00919 Malic enzyme, NAD binding domain V428_06800 SM01274 V428_06800 V428_06805 SM00387 Histidine kinase-like ATPases V428_06810 SM00448 cheY-homologous receiver domain V428_06820 SM00342 helix_turn_helix, arabinose operon control protein V428_06830 SM00382 ATPases associated with a variety of cellular activities V428_06850 SM00448 cheY-homologous receiver domain V428_06850 SM00862 Transcriptional regulatory protein, C terminal V428_06855 SM00387 Histidine kinase-like ATPases V428_06855 SM00388 His Kinase A (phosphoacceptor) domain V428_06890 SM00382 ATPases associated with a variety of cellular activities V428_06950 SM00267 diguanylate cyclase V428_06965 SM00342 helix_turn_helix, arabinose operon control protein V428_06970 SM00919 Malic enzyme, NAD binding domain V428_06970 SM01274 V428_06970 V428_06995 SM00530 Helix-turn-helix XRE-family like proteins V428_07010 SM00267 diguanylate cyclase V428_07030 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_07075 SM00642 Alpha-amylase domain V428_07095 SM00155 Phospholipase D. Active site motifs. V428_07160 SM00487 DEAD-like helicases superfamily V428_07160 SM00490 helicase superfamily c-terminal domain V428_07250 SM00530 Helix-turn-helix XRE-family like proteins V428_07320 SM00382 ATPases associated with a variety of cellular activities V428_07335 SM01007 Class II Aldolase and Adducin N-terminal domain V428_07355 SM00420 helix_turn_helix, Deoxyribose operon repressor V428_07355 SM01134 V428_07355 V428_07365 SM01130 V428_07365 V428_07440 SM00877 V428_07440 V428_07470 SM00877 V428_07470 V428_07475 SM00877 V428_07475 V428_07480 SM00877 V428_07480 V428_07490 SM00862 Transcriptional regulatory protein, C terminal V428_07520 SM00481 DNA polymerase alpha chain like domain V428_07560 SM00387 Histidine kinase-like ATPases V428_07565 SM00448 cheY-homologous receiver domain V428_07565 SM00862 Transcriptional regulatory protein, C terminal V428_07570 SM00382 ATPases associated with a variety of cellular activities V428_07580 SM00382 ATPases associated with a variety of cellular activities V428_07605 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_07610 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_07640 SM00382 ATPases associated with a variety of cellular activities V428_07700 SM00382 ATPases associated with a variety of cellular activities V428_07700 SM00962 SRP54-type protein, GTPase domain V428_07715 SM00448 cheY-homologous receiver domain V428_07725 SM00073 Histidine Phosphotransfer domain V428_07725 SM00260 Two component signalling adaptor domain V428_07725 SM00387 Histidine kinase-like ATPases V428_07725 SM01231 V428_07725 V428_07730 SM00448 cheY-homologous receiver domain V428_07750 SM00260 Two component signalling adaptor domain V428_07755 SM00260 Two component signalling adaptor domain V428_07765 SM00382 ATPases associated with a variety of cellular activities V428_07865 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. V428_07945 SM00354 helix_turn _helix lactose operon repressor V428_07985 SM00342 helix_turn_helix, arabinose operon control protein V428_07990 SM01329 V428_07990 V428_08045 SM00487 DEAD-like helicases superfamily V428_08195 SM00959 Rho termination factor, N-terminal domain V428_08285 SM00859 Semialdehyde dehydrogenase, NAD binding domain V428_08315 SM00858 V428_08315 V428_08335 SM00382 ATPases associated with a variety of cellular activities V428_08405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_08405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_08430 SM01091 Transporter associated domain V428_08495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_08505 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_08505 SM00876 Biotin and Thiamin Synthesis associated domain V428_08530 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_08545 SM00890 Domain of unknown function V428_08555 SM00342 helix_turn_helix, arabinose operon control protein V428_08630 SM00458 Ricin-type beta-trefoil V428_08715 SM01081 Putative carbohydrate binding domain V428_08770 SM00347 helix_turn_helix multiple antibiotic resistance protein V428_08785 SM00382 ATPases associated with a variety of cellular activities V428_08860 SM00052 Putative diguanylate phosphodiesterase V428_08860 SM00267 diguanylate cyclase V428_08870 SM00354 helix_turn _helix lactose operon repressor V428_08895 SM00257 Lysin motif V428_08900 SM00849 Metallo-beta-lactamase superfamily V428_08915 SM00479 V428_08915 V428_08925 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_08950 SM00073 Histidine Phosphotransfer domain V428_08960 SM00897 FIST N domain V428_08960 SM01204 V428_08960 V428_08965 SM00387 Histidine kinase-like ATPases V428_08965 SM00388 His Kinase A (phosphoacceptor) domain V428_08965 SM00448 cheY-homologous receiver domain V428_08970 SM00464 Found in ATP-dependent protease La (LON) V428_08975 SM00421 helix_turn_helix, Lux Regulon V428_08975 SM00448 cheY-homologous receiver domain V428_08980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_08980 SM00387 Histidine kinase-like ATPases V428_08985 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_09005 SM00926 Molybdopterin oxidoreductase Fe4S4 domain V428_09030 SM00852 Probable molybdopterin binding domain V428_09060 SM00382 ATPases associated with a variety of cellular activities V428_09075 SM00852 Probable molybdopterin binding domain V428_09085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_09085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_09105 SM00867 YceI-like domain V428_09115 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain V428_09125 SM00563 Phosphate acyltransferases V428_09150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_09150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_09175 SM00855 Phosphoglycerate mutase family V428_09180 SM00487 DEAD-like helicases superfamily V428_09180 SM00490 helicase superfamily c-terminal domain V428_09200 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase V428_09210 SM00363 S4 RNA-binding domain V428_09235 SM00871 Bacterial transcription activator, effector binding domain V428_09265 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_09330 SM00420 helix_turn_helix, Deoxyribose operon repressor V428_09330 SM01134 V428_09330 V428_09355 SM00830 Chorismate mutase type II V428_09430 SM00382 ATPases associated with a variety of cellular activities V428_09505 SM00382 ATPases associated with a variety of cellular activities V428_09510 SM00062 Bacterial periplasmic substrate-binding proteins V428_09510 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. V428_09535 SM00052 Putative diguanylate phosphodiesterase V428_09535 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_09535 SM00091 PAS domain V428_09535 SM00267 diguanylate cyclase V428_09540 SM00450 Rhodanese Homology Domain V428_09575 SM01359 V428_09575 V428_09575 SM01360 V428_09575 V428_09590 SM00981 V428_09590 V428_09670 SM00858 V428_09670 V428_09730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_09730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_09790 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor V428_09830 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_09845 SM01323 V428_09845 V428_09860 SM00450 Rhodanese Homology Domain V428_09865 SM00028 Tetratricopeptide repeats V428_09915 SM00271 DnaJ molecular chaperone homology domain V428_09940 SM00562 V428_09940 V428_09950 SM00028 Tetratricopeptide repeats V428_09955 SM00530 Helix-turn-helix XRE-family like proteins V428_09975 SM00564 beta-propeller repeat V428_09990 SM00062 Bacterial periplasmic substrate-binding proteins V428_09995 SM01211 V428_09995 V428_10000 SM01126 V428_10000 V428_10040 SM00926 Molybdopterin oxidoreductase Fe4S4 domain V428_10040 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region V428_10045 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region V428_10110 SM00360 RNA recognition motif V428_10135 SM00091 PAS domain V428_10140 SM00448 cheY-homologous receiver domain V428_10160 SM00052 Putative diguanylate phosphodiesterase V428_10160 SM00267 diguanylate cyclase V428_10205 SM00316 Ribosomal protein S1-like RNA-binding domain V428_10210 SM00411 bacterial (prokaryotic) histone like domain V428_10220 SM00028 Tetratricopeptide repeats V428_10225 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family V428_10235 SM01144 V428_10235 V428_10260 SM00528 Domain in histone-like proteins of HNS family V428_10275 SM01154 V428_10275 V428_10340 SM00357 Cold shock protein domain V428_10350 SM00382 ATPases associated with a variety of cellular activities V428_10350 SM01086 C-terminal, D2-small domain, of ClpB protein V428_10355 SM00316 Ribosomal protein S1-like RNA-binding domain V428_10375 SM00267 diguanylate cyclase V428_10375 SM00448 cheY-homologous receiver domain V428_10385 SM00344 helix_turn_helix ASNC type V428_10390 SM00843 V428_10390 V428_10400 SM00382 ATPases associated with a variety of cellular activities V428_10430 SM00382 ATPases associated with a variety of cellular activities V428_10435 SM00382 ATPases associated with a variety of cellular activities V428_10460 SM00382 ATPases associated with a variety of cellular activities V428_10505 SM00091 PAS domain V428_10505 SM00382 ATPases associated with a variety of cellular activities V428_10515 SM00267 diguanylate cyclase V428_10515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_10580 SM01007 Class II Aldolase and Adducin N-terminal domain V428_10595 SM00382 ATPases associated with a variety of cellular activities V428_10605 SM00342 helix_turn_helix, arabinose operon control protein V428_10670 SM00825 Beta-ketoacyl synthase V428_10710 SM00861 Transketolase, pyrimidine binding domain V428_10725 SM00881 CoA binding domain V428_10750 SM00382 ATPases associated with a variety of cellular activities V428_10760 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_10760 SM00866 V428_10760 V428_10800 SM00859 Semialdehyde dehydrogenase, NAD binding domain V428_10830 SM00822 V428_10830 V428_10835 SM00342 helix_turn_helix, arabinose operon control protein V428_10835 SM00871 Bacterial transcription activator, effector binding domain V428_10865 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_10970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_10970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_10970 SM01049 V428_10970 V428_10980 SM00091 PAS domain V428_10980 SM00387 Histidine kinase-like ATPases V428_10985 SM00448 cheY-homologous receiver domain V428_11005 SM00062 Bacterial periplasmic substrate-binding proteins V428_11020 SM00487 DEAD-like helicases superfamily V428_11020 SM00490 helicase superfamily c-terminal domain V428_11045 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_11060 SM00763 PrkA AAA domain V428_11065 SM00487 DEAD-like helicases superfamily V428_11065 SM00490 helicase superfamily c-terminal domain V428_11125 SM00387 Histidine kinase-like ATPases V428_11125 SM00388 His Kinase A (phosphoacceptor) domain V428_11125 SM00448 cheY-homologous receiver domain V428_11130 SM00382 ATPases associated with a variety of cellular activities V428_11140 SM00382 ATPases associated with a variety of cellular activities V428_11220 SM01118 V428_11220 V428_11245 SM00487 DEAD-like helicases superfamily V428_11245 SM00490 helicase superfamily c-terminal domain V428_11255 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. V428_11270 SM01144 V428_11270 V428_11295 SM00342 helix_turn_helix, arabinose operon control protein V428_11310 SM00642 Alpha-amylase domain V428_11450 SM00782 PhnA Zinc-Ribbon V428_11465 SM00495 Chitin-binding domain type 3 V428_11480 SM00855 Phosphoglycerate mutase family V428_11485 SM00091 PAS domain V428_11485 SM00267 diguanylate cyclase V428_11495 SM00463 Small MutS-related domain V428_11510 SM00062 Bacterial periplasmic substrate-binding proteins V428_11515 SM00487 DEAD-like helicases superfamily V428_11515 SM00490 helicase superfamily c-terminal domain V428_11520 SM00953 V428_11520 V428_11535 SM00354 helix_turn _helix lactose operon repressor V428_11560 SM00354 helix_turn _helix lactose operon repressor V428_11600 SM00925 MltA specific insert domain V428_11630 SM00434 DNA Topoisomerase IV V428_11645 SM00671 Sel1-like repeats. V428_11650 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain V428_11675 SM00873 B3/4 domain V428_11675 SM00874 tRNA synthetase B5 domain V428_11675 SM00896 Ferredoxin-fold anticodon binding domain V428_11680 SM00411 bacterial (prokaryotic) histone like domain V428_11685 SM00062 Bacterial periplasmic substrate-binding proteins V428_11685 SM00387 Histidine kinase-like ATPases V428_11685 SM00388 His Kinase A (phosphoacceptor) domain V428_11685 SM00448 cheY-homologous receiver domain V428_11715 SM00354 helix_turn _helix lactose operon repressor V428_11735 SM00382 ATPases associated with a variety of cellular activities V428_11770 SM00100 Cyclic nucleotide-monophosphate binding domain V428_11770 SM00419 helix_turn_helix, cAMP Regulatory protein V428_11825 SM00945 ProQ/FINO family V428_11830 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. V428_11830 SM00245 tail specific protease V428_11860 SM00981 V428_11860 V428_11870 SM00382 ATPases associated with a variety of cellular activities V428_11910 SM00822 V428_11910 V428_12000 SM00382 ATPases associated with a variety of cellular activities V428_12020 SM00825 Beta-ketoacyl synthase V428_12030 SM00822 V428_12030 V428_12035 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. V428_12085 SM00363 S4 RNA-binding domain V428_12090 SM00316 Ribosomal protein S1-like RNA-binding domain V428_12130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_12135 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase V428_12165 SM00450 Rhodanese Homology Domain V428_12170 SM00849 Metallo-beta-lactamase superfamily V428_12175 SM00448 cheY-homologous receiver domain V428_12175 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_12180 SM00387 Histidine kinase-like ATPases V428_12180 SM00388 His Kinase A (phosphoacceptor) domain V428_12180 SM00448 cheY-homologous receiver domain V428_12195 SM00382 ATPases associated with a variety of cellular activities V428_12195 SM00487 DEAD-like helicases superfamily V428_12195 SM00490 helicase superfamily c-terminal domain V428_12195 SM00847 Helicase associated domain (HA2) Add an annotation V428_12205 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_12210 SM00421 helix_turn_helix, Lux Regulon V428_12230 SM00382 ATPases associated with a variety of cellular activities V428_12265 SM00857 Resolvase, N terminal domain V428_12380 SM00062 Bacterial periplasmic substrate-binding proteins V428_12385 SM00341 Helicase and RNase D C-terminal V428_12385 SM00474 3'-5' exonuclease V428_12410 SM00491 V428_12410 V428_12450 SM00448 cheY-homologous receiver domain V428_12450 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_12455 SM00091 PAS domain V428_12460 SM00073 Histidine Phosphotransfer domain V428_12460 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_12460 SM00091 PAS domain V428_12460 SM00387 Histidine kinase-like ATPases V428_12460 SM00388 His Kinase A (phosphoacceptor) domain V428_12460 SM00448 cheY-homologous receiver domain V428_12495 SM00237 Domains in Na-Ca exchangers and integrin-beta4 V428_12505 SM01092 CO dehydrogenase flavoprotein C-terminal domain V428_12510 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain V428_12530 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain V428_12535 SM01092 CO dehydrogenase flavoprotein C-terminal domain V428_12610 SM00382 ATPases associated with a variety of cellular activities V428_12640 SM01322 V428_12640 V428_12675 SM00327 von Willebrand factor (vWF) type A domain V428_12680 SM00028 Tetratricopeptide repeats V428_12710 SM00052 Putative diguanylate phosphodiesterase V428_12720 SM00422 helix_turn_helix, mercury resistance V428_12800 SM00347 helix_turn_helix multiple antibiotic resistance protein V428_12870 SM00486 DNA polymerase type-B family V428_12880 SM00267 diguanylate cyclase V428_12890 SM00090 RIO-like kinase V428_12920 SM00518 AP endonuclease family 2 V428_12930 SM00822 V428_12930 V428_12935 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_12950 SM00052 Putative diguanylate phosphodiesterase V428_12950 SM00267 diguanylate cyclase V428_12965 SM00267 diguanylate cyclase V428_13015 SM00857 Resolvase, N terminal domain V428_13060 SM00052 Putative diguanylate phosphodiesterase V428_13060 SM00448 cheY-homologous receiver domain V428_13095 SM00822 V428_13095 V428_13140 SM00878 Biotin carboxylase C-terminal domain V428_13140 SM01209 V428_13140 V428_13150 SM00422 helix_turn_helix, mercury resistance V428_13155 SM00062 Bacterial periplasmic substrate-binding proteins V428_13235 SM00100 Cyclic nucleotide-monophosphate binding domain V428_13235 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_13240 SM00479 V428_13240 V428_13255 SM00382 ATPases associated with a variety of cellular activities V428_13265 SM00411 bacterial (prokaryotic) histone like domain V428_13270 SM00382 ATPases associated with a variety of cellular activities V428_13270 SM00464 Found in ATP-dependent protease La (LON) V428_13275 SM00382 ATPases associated with a variety of cellular activities V428_13275 SM00994 ClpX C4-type zinc finger V428_13275 SM01086 C-terminal, D2-small domain, of ClpB protein V428_13295 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_13305 SM00382 ATPases associated with a variety of cellular activities V428_13320 SM00487 DEAD-like helicases superfamily V428_13320 SM00490 helicase superfamily c-terminal domain V428_13320 SM00982 V428_13320 V428_13320 SM01058 CarD-like/TRCF domain V428_13345 SM00855 Phosphoglycerate mutase family V428_13360 SM00369 Leucine-rich repeats, typical (most populated) subfamily V428_13370 SM00342 helix_turn_helix, arabinose operon control protein V428_13455 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_13455 SM01240 V428_13455 V428_13490 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_13495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_13495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_13515 SM00893 Electron transfer flavoprotein domain V428_13525 SM00893 Electron transfer flavoprotein domain V428_13570 SM00382 ATPases associated with a variety of cellular activities V428_13590 SM00823 Phosphopantetheine attachment site V428_13595 SM00822 V428_13595 V428_13600 SM00823 Phosphopantetheine attachment site V428_13670 SM00387 Histidine kinase-like ATPases V428_13675 SM00493 V428_13675 V428_13685 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V428_13685 SM00382 ATPases associated with a variety of cellular activities V428_13700 SM00926 Molybdopterin oxidoreductase Fe4S4 domain V428_13810 SM00382 ATPases associated with a variety of cellular activities V428_13815 SM00382 ATPases associated with a variety of cellular activities V428_13865 SM00448 cheY-homologous receiver domain V428_13875 SM00073 Histidine Phosphotransfer domain V428_13875 SM00260 Two component signalling adaptor domain V428_13875 SM00387 Histidine kinase-like ATPases V428_13875 SM01231 V428_13875 V428_13880 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_13885 SM00260 Two component signalling adaptor domain V428_13890 SM00138 Methyltransferase, chemotaxis proteins V428_13895 SM00448 cheY-homologous receiver domain V428_13900 SM00052 Putative diguanylate phosphodiesterase V428_13900 SM00448 cheY-homologous receiver domain V428_13905 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_13905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_13910 SM01005 Alanine racemase, C-terminal domain V428_13915 SM00873 B3/4 domain V428_13920 SM00530 Helix-turn-helix XRE-family like proteins V428_14055 SM00382 ATPases associated with a variety of cellular activities V428_14295 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_14295 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_14330 SM01005 Alanine racemase, C-terminal domain V428_14340 SM00382 ATPases associated with a variety of cellular activities V428_14350 SM00382 ATPases associated with a variety of cellular activities V428_14385 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_14390 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V428_14395 SM00448 cheY-homologous receiver domain V428_14395 SM00850 LytTr DNA-binding domain V428_14415 SM00487 DEAD-like helicases superfamily V428_14415 SM00490 helicase superfamily c-terminal domain V428_14450 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_14450 SM00091 PAS domain V428_14450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_14485 SM00900 V428_14485 V428_14495 SM00478 endonuclease III V428_14495 SM00525 V428_14495 V428_14510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_14515 SM00479 V428_14515 V428_14525 SM00487 DEAD-like helicases superfamily V428_14525 SM00490 helicase superfamily c-terminal domain V428_14550 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_14550 SM01091 Transporter associated domain V428_14625 SM00267 diguanylate cyclase V428_14630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_14710 SM00859 Semialdehyde dehydrogenase, NAD binding domain V428_14720 SM00014 Acid phosphatase homologues V428_14735 SM00342 helix_turn_helix, arabinose operon control protein V428_14735 SM00871 Bacterial transcription activator, effector binding domain V428_14770 SM01217 V428_14770 V428_14775 SM00342 helix_turn_helix, arabinose operon control protein V428_14835 SM00052 Putative diguanylate phosphodiesterase V428_14835 SM00267 diguanylate cyclase V428_14855 SM00382 ATPases associated with a variety of cellular activities V428_14860 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_14875 SM00382 ATPases associated with a variety of cellular activities V428_14885 SM00062 Bacterial periplasmic substrate-binding proteins V428_14900 SM00422 helix_turn_helix, mercury resistance V428_14915 SM01351 V428_14915 V428_14925 SM00487 DEAD-like helicases superfamily V428_14925 SM00490 helicase superfamily c-terminal domain V428_14940 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V428_14960 SM00917 LeuA allosteric (dimerisation) domain V428_14965 SM00851 MGS-like domain V428_14965 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain V428_14970 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain V428_15020 SM00382 ATPases associated with a variety of cellular activities V428_15030 SM00062 Bacterial periplasmic substrate-binding proteins V428_15040 SM00382 ATPases associated with a variety of cellular activities V428_15065 SM00899 V428_15065 V428_15095 SM00062 Bacterial periplasmic substrate-binding proteins V428_15100 SM00062 Bacterial periplasmic substrate-binding proteins V428_15105 SM00267 diguanylate cyclase V428_15125 SM00840 V428_15125 V428_15260 SM00382 ATPases associated with a variety of cellular activities V428_15355 SM00278 Helix-hairpin-helix DNA-binding motif class 1 V428_15355 SM00465 GIY-YIG type nucleases (URI domain) V428_15360 SM00421 helix_turn_helix, Lux Regulon V428_15360 SM00448 cheY-homologous receiver domain V428_15380 SM00382 ATPases associated with a variety of cellular activities V428_15415 SM00528 Domain in histone-like proteins of HNS family V428_15545 SM00491 V428_15545 V428_15570 SM00098 Alkaline phosphatase homologues V428_15575 SM00098 Alkaline phosphatase homologues V428_15595 SM00421 helix_turn_helix, Lux Regulon V428_15595 SM00448 cheY-homologous receiver domain V428_15600 SM00387 Histidine kinase-like ATPases V428_15610 SM00267 diguanylate cyclase V428_15615 SM00062 Bacterial periplasmic substrate-binding proteins V428_15615 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. V428_15625 SM00382 ATPases associated with a variety of cellular activities V428_15655 SM01091 Transporter associated domain V428_15670 SM00382 ATPases associated with a variety of cellular activities V428_15740 SM00382 ATPases associated with a variety of cellular activities V428_15740 SM00448 cheY-homologous receiver domain V428_15745 SM00091 PAS domain V428_15745 SM00387 Histidine kinase-like ATPases V428_15745 SM00388 His Kinase A (phosphoacceptor) domain V428_15750 SM00382 ATPases associated with a variety of cellular activities V428_15775 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_15775 SM00924 MgtE intracellular N domain V428_15790 SM00047 Lysozyme subfamily 2 V428_15835 SM00138 Methyltransferase, chemotaxis proteins V428_15840 SM00260 Two component signalling adaptor domain V428_15840 SM00448 cheY-homologous receiver domain V428_15845 SM00858 V428_15845 V428_15875 SM00363 S4 RNA-binding domain V428_15880 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_15905 SM00420 helix_turn_helix, Deoxyribose operon repressor V428_15905 SM01134 V428_15905 V428_15940 SM00357 Cold shock protein domain V428_15950 SM00861 Transketolase, pyrimidine binding domain V428_15975 SM00487 DEAD-like helicases superfamily V428_15975 SM00490 helicase superfamily c-terminal domain V428_16135 SM00363 S4 RNA-binding domain V428_16155 SM00481 DNA polymerase alpha chain like domain V428_16215 SM00247 Beta/gamma crystallins V428_16305 SM00530 Helix-turn-helix XRE-family like proteins V428_16405 SM00448 cheY-homologous receiver domain V428_16405 SM00862 Transcriptional regulatory protein, C terminal V428_16420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_16420 SM00387 Histidine kinase-like ATPases V428_16420 SM00388 His Kinase A (phosphoacceptor) domain V428_16420 SM00448 cheY-homologous receiver domain V428_16500 SM00028 Tetratricopeptide repeats V428_16500 SM00448 cheY-homologous receiver domain V428_16560 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_16560 SM00091 PAS domain V428_16560 SM00267 diguanylate cyclase V428_16585 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor V428_16605 SM00354 helix_turn _helix lactose operon repressor V428_16610 SM00640 Glycosyl hydrolases family 32 V428_16630 SM00271 DnaJ molecular chaperone homology domain V428_16660 SM01131 V428_16660 V428_16675 SM00382 ATPases associated with a variety of cellular activities V428_16695 SM00528 Domain in histone-like proteins of HNS family V428_16715 SM00530 Helix-turn-helix XRE-family like proteins V428_16775 SM00062 Bacterial periplasmic substrate-binding proteins V428_16775 SM00387 Histidine kinase-like ATPases V428_16775 SM00388 His Kinase A (phosphoacceptor) domain V428_16775 SM00448 cheY-homologous receiver domain V428_16775 SM00918 Ligated ion channel L-glutamate- and glycine-binding site V428_16810 SM00382 ATPases associated with a variety of cellular activities V428_16880 SM00448 cheY-homologous receiver domain V428_16880 SM00862 Transcriptional regulatory protein, C terminal V428_16895 SM00382 ATPases associated with a variety of cellular activities V428_16900 SM00382 ATPases associated with a variety of cellular activities V428_16935 SM00382 ATPases associated with a variety of cellular activities V428_16960 SM00267 diguanylate cyclase V428_17065 SM00919 Malic enzyme, NAD binding domain V428_17065 SM01274 V428_17065 V428_17070 SM00387 Histidine kinase-like ATPases V428_17070 SM00448 cheY-homologous receiver domain V428_17085 SM00926 Molybdopterin oxidoreductase Fe4S4 domain V428_17135 SM00387 Histidine kinase-like ATPases V428_17135 SM00388 His Kinase A (phosphoacceptor) domain V428_17140 SM00382 ATPases associated with a variety of cellular activities V428_17140 SM00448 cheY-homologous receiver domain V428_17155 SM00382 ATPases associated with a variety of cellular activities V428_17165 SM00852 Probable molybdopterin binding domain V428_17175 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_17185 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_17185 SM00091 PAS domain V428_17185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_17235 SM00091 PAS domain V428_17235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_17235 SM00387 Histidine kinase-like ATPases V428_17235 SM00388 His Kinase A (phosphoacceptor) domain V428_17235 SM00448 cheY-homologous receiver domain V428_17255 SM00382 ATPases associated with a variety of cellular activities V428_17260 SM00382 ATPases associated with a variety of cellular activities V428_17300 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain V428_17300 SM00437 Bacterial DNA topoisomerase I DNA-binding domain V428_17300 SM00493 V428_17300 V428_17345 SM00788 Adenylosuccinate synthetase V428_17355 SM00342 helix_turn_helix, arabinose operon control protein V428_17365 SM00363 S4 RNA-binding domain V428_17425 SM00861 Transketolase, pyrimidine binding domain V428_17435 SM00731 SprT homologues. V428_17455 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_17465 SM00732 Likely ribonuclease with RNase H fold. V428_17490 SM00460 Transglutaminase/protease-like homologues V428_17515 SM00986 Uracil DNA glycosylase superfamily V428_17515 SM00987 UreE urease accessory protein, C-terminal domain V428_17550 SM00937 V428_17550 V428_17575 SM01400 V428_17575 V428_17650 SM00100 Cyclic nucleotide-monophosphate binding domain V428_17655 SM01022 V428_17655 V428_17665 SM00642 Alpha-amylase domain V428_17675 SM00890 Domain of unknown function V428_17690 SM01150 V428_17690 V428_17755 SM00965 Secretin and TonB N terminus short domain V428_17775 SM00842 Cell division protein FtsA V428_17790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_17790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_17800 SM00849 Metallo-beta-lactamase superfamily V428_17840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_17840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_17900 SM01236 V428_17900 V428_17905 SM00822 V428_17905 V428_17915 SM00448 cheY-homologous receiver domain V428_17915 SM00862 Transcriptional regulatory protein, C terminal V428_17920 SM00387 Histidine kinase-like ATPases V428_17920 SM00388 His Kinase A (phosphoacceptor) domain V428_17930 SM01240 V428_17930 V428_17940 SM00841 Elongation factor P, C-terminal V428_17940 SM01185 V428_17940 V428_17965 SM00267 diguanylate cyclase V428_17990 SM00267 diguanylate cyclase V428_17995 SM00357 Cold shock protein domain V428_18010 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_18025 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_18025 SM01091 Transporter associated domain V428_18095 SM00936 Penicillin-binding protein 5, C-terminal domain V428_18115 SM00729 Elongator protein 3, MiaB family, Radical SAM V428_18145 SM00422 helix_turn_helix, mercury resistance V428_18225 SM00926 Molybdopterin oxidoreductase Fe4S4 domain V428_18240 SM00387 Histidine kinase-like ATPases V428_18240 SM00388 His Kinase A (phosphoacceptor) domain V428_18245 SM00421 helix_turn_helix, Lux Regulon V428_18245 SM00448 cheY-homologous receiver domain V428_18255 SM00448 cheY-homologous receiver domain V428_18255 SM00850 LytTr DNA-binding domain V428_18290 SM00267 diguanylate cyclase V428_18300 SM00316 Ribosomal protein S1-like RNA-binding domain V428_18300 SM00322 K homology RNA-binding domain V428_18305 SM01387 V428_18305 V428_18325 SM00316 Ribosomal protein S1-like RNA-binding domain V428_18365 SM00382 ATPases associated with a variety of cellular activities V428_18375 SM01103 V428_18375 V428_18410 SM00861 Transketolase, pyrimidine binding domain V428_18430 SM00382 ATPases associated with a variety of cellular activities V428_18525 SM00052 Putative diguanylate phosphodiesterase V428_18525 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_18525 SM00091 PAS domain V428_18525 SM00267 diguanylate cyclase V428_18555 SM00878 Biotin carboxylase C-terminal domain V428_18580 SM00829 Enoylreductase V428_18595 SM01266 V428_18595 V428_18625 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain V428_18635 SM00870 V428_18635 V428_18645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_18645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_18650 SM00937 V428_18650 V428_18690 SM00382 ATPases associated with a variety of cellular activities V428_18715 SM00852 Probable molybdopterin binding domain V428_18725 SM00825 Beta-ketoacyl synthase V428_18730 SM00822 V428_18730 V428_18740 SM00825 Beta-ketoacyl synthase V428_18800 SM00563 Phosphate acyltransferases V428_18825 SM00477 DNA/RNA non-specific endonuclease V428_18825 SM00892 DNA/RNA non-specific endonuclease V428_18835 SM01057 Eukaryotic-type carbonic anhydrase V428_18860 SM00382 ATPases associated with a variety of cellular activities V428_18875 SM01012 V428_18875 V428_18885 SM00926 Molybdopterin oxidoreductase Fe4S4 domain V428_18915 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase V428_18945 SM00382 ATPases associated with a variety of cellular activities V428_18950 SM00382 ATPases associated with a variety of cellular activities V428_19000 SM00028 Tetratricopeptide repeats V428_19005 SM00495 Chitin-binding domain type 3 V428_19005 SM00636 V428_19005 V428_19050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_19050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_19060 SM00357 Cold shock protein domain V428_19090 SM00479 V428_19090 V428_19125 SM00052 Putative diguanylate phosphodiesterase V428_19125 SM00091 PAS domain V428_19125 SM00267 diguanylate cyclase V428_19160 SM00382 ATPases associated with a variety of cellular activities V428_19175 SM00450 Rhodanese Homology Domain V428_19205 SM00052 Putative diguanylate phosphodiesterase V428_19220 SM00382 ATPases associated with a variety of cellular activities V428_19230 SM00260 Two component signalling adaptor domain V428_19230 SM00448 cheY-homologous receiver domain V428_19270 SM00278 Helix-hairpin-helix DNA-binding motif class 1 V428_19285 SM00448 cheY-homologous receiver domain V428_19295 SM00382 ATPases associated with a variety of cellular activities V428_19395 SM00014 Acid phosphatase homologues V428_19405 SM00448 cheY-homologous receiver domain V428_19405 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_19435 SM00487 DEAD-like helicases superfamily V428_19435 SM00490 helicase superfamily c-terminal domain V428_19435 SM00847 Helicase associated domain (HA2) Add an annotation V428_19480 SM00450 Rhodanese Homology Domain V428_19510 SM00382 ATPases associated with a variety of cellular activities V428_19565 SM00382 ATPases associated with a variety of cellular activities V428_19585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_19630 SM00244 prohibitin homologues V428_19640 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_19645 SM00382 ATPases associated with a variety of cellular activities V428_19755 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_19820 SM00344 helix_turn_helix ASNC type V428_19835 SM00347 helix_turn_helix multiple antibiotic resistance protein V428_19845 SM00829 Enoylreductase V428_19865 SM00642 Alpha-amylase domain V428_19870 SM00642 Alpha-amylase domain V428_19880 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain V428_19895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_19895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_19995 SM00382 ATPases associated with a variety of cellular activities V428_20000 SM00278 Helix-hairpin-helix DNA-binding motif class 1 V428_20005 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_20005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_20070 SM01152 V428_20070 V428_20090 SM00382 ATPases associated with a variety of cellular activities V428_20105 SM00487 DEAD-like helicases superfamily V428_20105 SM00490 helicase superfamily c-terminal domain V428_20155 SM00411 bacterial (prokaryotic) histone like domain V428_20170 SM00382 ATPases associated with a variety of cellular activities V428_20195 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V428_20195 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_20195 SM00091 PAS domain V428_20195 SM00267 diguanylate cyclase V428_20210 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain V428_20215 SM01133 V428_20215 V428_20285 SM00530 Helix-turn-helix XRE-family like proteins V428_20525 SM01091 Transporter associated domain V428_20580 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain V428_20590 SM00382 ATPases associated with a variety of cellular activities V428_20620 SM00533 DNA-binding domain of DNA mismatch repair MUTS family V428_20620 SM00534 ATPase domain of DNA mismatch repair MUTS family V428_20635 SM00347 helix_turn_helix multiple antibiotic resistance protein V428_20675 SM00382 ATPases associated with a variety of cellular activities V428_20695 SM00986 Uracil DNA glycosylase superfamily V428_20695 SM00987 UreE urease accessory protein, C-terminal domain V428_20730 SM00563 Phosphate acyltransferases V428_20760 SM00271 DnaJ molecular chaperone homology domain V428_20795 SM00434 DNA Topoisomerase IV V428_20800 SM00387 Histidine kinase-like ATPases V428_20800 SM00433 TopoisomeraseII V428_20870 SM01118 V428_20870 V428_20895 SM00450 Rhodanese Homology Domain V428_20905 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_20935 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V428_20945 SM00382 ATPases associated with a variety of cellular activities V428_20955 SM00478 endonuclease III V428_20955 SM00525 V428_20955 V428_20980 SM00062 Bacterial periplasmic substrate-binding proteins V428_21020 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V428_21020 SM00267 diguanylate cyclase V428_21025 SM01130 V428_21025 V428_21095 SM00382 ATPases associated with a variety of cellular activities V428_21125 SM00344 helix_turn_helix ASNC type V428_21130 SM01266 V428_21130 V428_21135 SM00642 Alpha-amylase domain V428_21145 SM00354 helix_turn _helix lactose operon repressor V428_21160 SM00870 V428_21160 V428_21175 SM00851 MGS-like domain V428_21210 SM00260 Two component signalling adaptor domain V428_21210 SM00448 cheY-homologous receiver domain V428_21255 SM01207 V428_21255 V428_21260 SM00905 Dihydroneopterin aldolase V428_21280 SM00833 Cobalamin synthesis protein cobW C-terminal domain V428_21315 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_21315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_21320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_21330 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V428_21330 SM00267 diguanylate cyclase V428_21350 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_21350 SM00895 V428_21350 V428_21355 SM00644 V428_21355 V428_21415 SM00957 SecA DEAD-like domain V428_21415 SM00958 SecA preprotein cross-linking domain V428_21430 SM00864 Tubulin/FtsZ family, GTPase domain V428_21430 SM00865 Tubulin/FtsZ family, C-terminal domain V428_21435 SM00842 Cell division protein FtsA V428_21520 SM00749 bacterial OsmY and nodulation domain V428_21570 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. V428_21575 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. V428_21650 SM00382 ATPases associated with a variety of cellular activities V428_21670 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_21675 SM00382 ATPases associated with a variety of cellular activities V428_21760 SM00530 Helix-turn-helix XRE-family like proteins V428_21795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_21795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_21820 SM00421 helix_turn_helix, Lux Regulon V428_21830 SM00062 Bacterial periplasmic substrate-binding proteins V428_21850 SM00357 Cold shock protein domain V428_21860 SM00062 Bacterial periplasmic substrate-binding proteins V428_21860 SM00267 diguanylate cyclase V428_21865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_21865 SM00387 Histidine kinase-like ATPases V428_21865 SM00388 His Kinase A (phosphoacceptor) domain V428_21870 SM00448 cheY-homologous receiver domain V428_21870 SM00862 Transcriptional regulatory protein, C terminal V428_21895 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V428_21895 SM00091 PAS domain V428_21895 SM00267 diguanylate cyclase V428_21950 SM00530 Helix-turn-helix XRE-family like proteins V428_21955 SM00345 helix_turn_helix gluconate operon transcriptional repressor V428_21955 SM00866 V428_21955 V428_21980 SM00382 ATPases associated with a variety of cellular activities V428_21990 SM00267 diguanylate cyclase V428_22005 SM00342 helix_turn_helix, arabinose operon control protein V428_22005 SM00871 Bacterial transcription activator, effector binding domain V428_22015 SM01060 V428_22015 V428_22040 SM00014 Acid phosphatase homologues V428_22050 SM00822 V428_22050 V428_22065 SM00091 PAS domain V428_22080 SM01120 V428_22080 V428_22140 SM00838 Elongation factor G C-terminus V428_22140 SM00889 Elongation factor G, domain IV V428_22180 SM01126 V428_22180 V428_22185 SM00663 RNA polymerase I subunit A N-terminus V428_22210 SM00649 Ribosomal protein L11/L12 V428_22215 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. V428_22215 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. V428_22270 SM00342 helix_turn_helix, arabinose operon control protein V428_22285 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain V428_22285 SM00437 Bacterial DNA topoisomerase I DNA-binding domain V428_22285 SM00493 V428_22285 V428_22305 SM00387 Histidine kinase-like ATPases V428_22310 SM00448 cheY-homologous receiver domain V428_22310 SM00862 Transcriptional regulatory protein, C terminal V428_22345 SM00382 ATPases associated with a variety of cellular activities V428_22345 SM00448 cheY-homologous receiver domain V428_22355 SM00387 Histidine kinase-like ATPases V428_22355 SM00388 His Kinase A (phosphoacceptor) domain V428_22375 SM00116 Domain in cystathionine beta-synthase and other proteins. V428_22385 SM00062 Bacterial periplasmic substrate-binding proteins V428_22390 SM00344 helix_turn_helix ASNC type V428_22400 SM00849 Metallo-beta-lactamase superfamily V428_22405 SM00382 ATPases associated with a variety of cellular activities V428_22405 SM01086 C-terminal, D2-small domain, of ClpB protein V428_22415 SM00363 S4 RNA-binding domain V428_22455 SM01002 Alanine dehydrogenase/PNT, C-terminal domain V428_22455 SM01003 Alanine dehydrogenase/PNT, N-terminal domain V428_22465 SM00342 helix_turn_helix, arabinose operon control protein V428_22475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_22475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_22545 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_22545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_22555 SM00382 ATPases associated with a variety of cellular activities V428_22565 SM01038 Beta galactosidase small chain V428_22570 SM00354 helix_turn _helix lactose operon repressor V428_22615 SM00464 Found in ATP-dependent protease La (LON) V428_22620 SM00836 DALR anticodon binding domain V428_22620 SM01016 Arginyl tRNA synthetase N terminal dom V428_22635 SM00382 ATPases associated with a variety of cellular activities V428_22635 SM01086 C-terminal, D2-small domain, of ClpB protein V428_22675 SM00924 MgtE intracellular N domain V428_22680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V428_22680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_22680 SM01358 V428_22680 V428_22710 SM00341 Helicase and RNase D C-terminal V428_22710 SM00487 DEAD-like helicases superfamily V428_22710 SM00490 helicase superfamily c-terminal domain V428_22710 SM00956 V428_22710 V428_22745 SM00382 ATPases associated with a variety of cellular activities V428_22765 SM01230 V428_22765 V428_22810 SM00642 Alpha-amylase domain V428_22830 SM00448 cheY-homologous receiver domain V428_22830 SM00862 Transcriptional regulatory protein, C terminal V428_22835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V428_22835 SM00387 Histidine kinase-like ATPases V428_22835 SM00388 His Kinase A (phosphoacceptor) domain V428_22845 SM00919 Malic enzyme, NAD binding domain V428_22845 SM01274 V428_22845 V428_22860 SM00487 DEAD-like helicases superfamily V428_22860 SM00490 helicase superfamily c-terminal domain V428_22900 SM00382 ATPases associated with a variety of cellular activities V428_22905 SM00563 Phosphate acyltransferases V428_22910 SM00563 Phosphate acyltransferases V428_22935 SM00062 Bacterial periplasmic substrate-binding proteins V428_22940 SM00382 ATPases associated with a variety of cellular activities V428_22970 SM00267 diguanylate cyclase V428_22975 SM00422 helix_turn_helix, mercury resistance V428_23045 SM00829 Enoylreductase V428_23055 SM00052 Putative diguanylate phosphodiesterase V428_23055 SM00267 diguanylate cyclase V428_23135 SM00421 helix_turn_helix, Lux Regulon V428_23145 SM00420 helix_turn_helix, Deoxyribose operon repressor V428_23145 SM01134 V428_23145 V428_23150 SM00448 cheY-homologous receiver domain V428_23150 SM00862 Transcriptional regulatory protein, C terminal V428_23155 SM00387 Histidine kinase-like ATPases V428_23155 SM00388 His Kinase A (phosphoacceptor) domain V428_23180 SM00382 ATPases associated with a variety of cellular activities V428_23220 SM00470 ParB-like nuclease domain V428_23235 SM01228 V428_23235 V428_23250 SM00382 ATPases associated with a variety of cellular activities V428_23255 SM00382 ATPases associated with a variety of cellular activities V428_23290 SM00382 ATPases associated with a variety of cellular activities V428_23300 SM00062 Bacterial periplasmic substrate-binding proteins V428_23300 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins.