locus-tag class description MUW98_00005 PF00308 Bacterial dnaA protein MUW98_00005 PF08299 Bacterial dnaA protein helix-turn-helix MUW98_00005 PF11638 DnaA N-terminal domain MUW98_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain MUW98_00010 PF02767 DNA polymerase III beta subunit, central domain MUW98_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain MUW98_00015 PF02463 RecF/RecN/SMC N terminal domain MUW98_00020 PF01751 Toprim domain MUW98_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_00020 PF00986 DNA gyrase B subunit, carboxyl terminus MUW98_00020 PF00204 DNA gyrase B MUW98_00020 PF18053 DNA gyrase B subunit insert domain MUW98_00030 PF08279 HTH domain MUW98_00030 PF13280 WYL domain MUW98_00035 PF00011 Hsp20/alpha crystallin family MUW98_00040 PF00011 Hsp20/alpha crystallin family MUW98_00045 PF00155 Aminotransferase class I and II MUW98_00060 PF07690 Major Facilitator Superfamily MUW98_00065 PF00486 Transcriptional regulatory protein, C terminal MUW98_00065 PF00072 Response regulator receiver domain MUW98_00070 PF13493 Domain of unknown function (DUF4118) MUW98_00070 PF13492 GAF domain MUW98_00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_00070 PF00512 His Kinase A (phospho-acceptor) domain MUW98_00070 PF02702 Osmosensitive K+ channel His kinase sensor domain MUW98_00075 PF02669 K+-transporting ATPase, c chain MUW98_00085 PF03814 Potassium-transporting ATPase A subunit MUW98_00090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MUW98_00090 PF07992 Pyridine nucleotide-disulphide oxidoreductase MUW98_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_00095 PF00512 His Kinase A (phospho-acceptor) domain MUW98_00095 PF00497 Bacterial extracellular solute-binding proteins, family 3 MUW98_00100 PF00873 AcrB/AcrD/AcrF family MUW98_00105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MUW98_00150 PF02887 Pyruvate kinase, alpha/beta domain MUW98_00150 PF00224 Pyruvate kinase, barrel domain MUW98_00155 PF07690 Major Facilitator Superfamily MUW98_00165 PF00512 His Kinase A (phospho-acceptor) domain MUW98_00165 PF00672 HAMP domain MUW98_00165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_00170 PF02954 Bacterial regulatory protein, Fis family MUW98_00170 PF00072 Response regulator receiver domain MUW98_00170 PF14532 Sigma-54 interaction domain MUW98_00185 PF12146 Serine aminopeptidase, S33 MUW98_00190 PF12105 SpoU, rRNA methylase, C-terminal MUW98_00190 PF00588 SpoU rRNA Methylase family MUW98_00195 PF13291 ACT domain MUW98_00195 PF04607 Region found in RelA / SpoT proteins MUW98_00195 PF02824 TGS domain MUW98_00200 PF01192 RNA polymerase Rpb6 MUW98_00205 PF00625 Guanylate kinase MUW98_00210 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MUW98_00225 PF00892 EamA-like transporter family MUW98_00245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_00245 PF03466 LysR substrate binding domain MUW98_00250 PF00579 tRNA synthetases class I (W and Y) MUW98_00255 PF00582 Universal stress protein family MUW98_00260 PF07055 Enoyl reductase FAD binding domain MUW98_00260 PF12241 Trans-2-enoyl-CoA reductase catalytic region MUW98_00260 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase MUW98_00265 PF00990 Diguanylate cyclase, GGDEF domain MUW98_00270 PF00210 Ferritin-like domain MUW98_00280 PF07690 Major Facilitator Superfamily MUW98_00285 PF01810 LysE type translocator MUW98_00300 PF15976 CS1-pili formation C-terminal MUW98_00300 PF16967 E-set like domain MUW98_00305 PF18649 EcpB C-terminal domain MUW98_00310 PF16449 Fimbrillin MatB MUW98_00315 PF00072 Response regulator receiver domain MUW98_00315 PF00196 Bacterial regulatory proteins, luxR family MUW98_00320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_00320 PF00512 His Kinase A (phospho-acceptor) domain MUW98_00320 PF00072 Response regulator receiver domain MUW98_00320 PF00989 PAS fold MUW98_00320 PF01627 Hpt domain MUW98_00320 PF00497 Bacterial extracellular solute-binding proteins, family 3 MUW98_00330 PF07694 5TMR of 5TMR-LYT MUW98_00330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_00330 PF06580 Histidine kinase MUW98_00335 PF04397 LytTr DNA-binding domain MUW98_00335 PF00072 Response regulator receiver domain MUW98_00340 PF07690 Major Facilitator Superfamily MUW98_00345 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MUW98_00345 PF02222 ATP-grasp domain MUW98_00350 PF00731 AIR carboxylase MUW98_00365 PF03466 LysR substrate binding domain MUW98_00365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_00370 PF00593 TonB dependent receptor MUW98_00370 PF07715 TonB-dependent Receptor Plug Domain MUW98_00375 PF01177 Asp/Glu/Hydantoin racemase MUW98_00410 PF00899 ThiF family MUW98_00415 PF02657 Fe-S metabolism associated domain MUW98_00420 PF00266 Aminotransferase class-V MUW98_00425 PF13361 UvrD-like helicase C-terminal domain MUW98_00425 PF00580 UvrD/REP helicase N-terminal domain MUW98_00430 PF00990 Diguanylate cyclase, GGDEF domain MUW98_00430 PF03707 Bacterial signalling protein N terminal repeat MUW98_00430 PF00563 EAL domain MUW98_00435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MUW98_00440 PF08240 Alcohol dehydrogenase GroES-like domain MUW98_00440 PF00107 Zinc-binding dehydrogenase MUW98_00445 PF00155 Aminotransferase class I and II MUW98_00450 PF00440 Bacterial regulatory proteins, tetR family MUW98_00450 PF08360 QacR-like protein, C-terminal region MUW98_00455 PF01370 NAD dependent epimerase/dehydratase family MUW98_00470 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) MUW98_00490 PF03755 YicC-like family, N-terminal region MUW98_00490 PF08340 Domain of unknown function (DUF1732) MUW98_00495 PF01138 3' exoribonuclease family, domain 1 MUW98_00495 PF03725 3' exoribonuclease family, domain 2 MUW98_00500 PF00156 Phosphoribosyl transferase domain MUW98_00505 PF00403 Heavy-metal-associated domain MUW98_00510 PF00376 MerR family regulatory protein MUW98_00510 PF09278 MerR, DNA binding MUW98_00515 PF00563 EAL domain MUW98_00515 PF01590 GAF domain MUW98_00515 PF00990 Diguanylate cyclase, GGDEF domain MUW98_00515 PF00360 Phytochrome region MUW98_00520 PF06288 Protein of unknown function (DUF1040) MUW98_00525 PF13746 4Fe-4S dicluster domain MUW98_00525 PF12801 4Fe-4S binding domain MUW98_00525 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase MUW98_00530 PF01636 Phosphotransferase enzyme family MUW98_00535 PF01323 DSBA-like thioredoxin domain MUW98_00540 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain MUW98_00540 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family MUW98_00545 PF00857 Isochorismatase family MUW98_00555 PF04463 Protein of unknown function (DUF523) MUW98_00560 PF01553 Acyltransferase MUW98_00565 PF01553 Acyltransferase MUW98_00570 PF13335 Magnesium chelatase, subunit ChlI C-terminal MUW98_00570 PF01078 Magnesium chelatase, subunit ChlI MUW98_00575 PF00205 Thiamine pyrophosphate enzyme, central domain MUW98_00575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MUW98_00575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MUW98_00585 PF01063 Amino-transferase class IV MUW98_00590 PF00920 Dehydratase family MUW98_00595 PF00291 Pyridoxal-phosphate dependent enzyme MUW98_00595 PF00585 C-terminal regulatory domain of Threonine dehydratase MUW98_00600 PF01389 OmpA-like transmembrane domain MUW98_00600 PF00691 OmpA family MUW98_00610 PF00440 Bacterial regulatory proteins, tetR family MUW98_00620 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MUW98_00620 PF18074 Primosomal protein N C-terminal domain MUW98_00620 PF17764 3′ DNA-binding domain (3′BD) MUW98_00620 PF00271 Helicase conserved C-terminal domain MUW98_00620 PF00270 DEAD/DEAH box helicase MUW98_00625 PF01197 Ribosomal protein L31 MUW98_00630 PF13460 NAD(P)H-binding MUW98_00630 PF11066 Protein of unknown function (DUF2867) MUW98_00635 PF03949 Malic enzyme, NAD binding domain MUW98_00635 PF00390 Malic enzyme, N-terminal domain MUW98_00645 PF00672 HAMP domain MUW98_00645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_00645 PF00512 His Kinase A (phospho-acceptor) domain MUW98_00650 PF00072 Response regulator receiver domain MUW98_00650 PF00486 Transcriptional regulatory protein, C terminal MUW98_00655 PF05958 tRNA (Uracil-5-)-methyltransferase MUW98_00670 PF00128 Alpha amylase, catalytic domain MUW98_00670 PF02903 Alpha amylase, N-terminal ig-like domain MUW98_00685 PF00012 Hsp70 protein MUW98_00690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MUW98_00690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MUW98_00695 PF05981 CreA protein MUW98_00710 PF01258 Prokaryotic dksA/traR C4-type zinc finger MUW98_00715 PF00120 Glutamine synthetase, catalytic domain MUW98_00720 PF00202 Aminotransferase class-III MUW98_00725 PF13416 Bacterial extracellular solute-binding protein MUW98_00730 PF13416 Bacterial extracellular solute-binding protein MUW98_00735 PF00005 ABC transporter MUW98_00735 PF08402 TOBE domain MUW98_00740 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_00745 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_00750 PF03475 3-alpha domain MUW98_00750 PF03473 MOSC domain MUW98_00765 PF03061 Thioesterase superfamily MUW98_00770 PF09382 RQC domain MUW98_00770 PF16124 RecQ zinc-binding MUW98_00770 PF00570 HRDC domain MUW98_00770 PF00271 Helicase conserved C-terminal domain MUW98_00770 PF00270 DEAD/DEAH box helicase MUW98_00775 PF00034 Cytochrome c MUW98_00780 PF02696 Uncharacterized ACR, YdiU/UPF0061 family MUW98_00790 PF02592 Putative vitamin uptake transporter MUW98_00795 PF03737 Aldolase/RraA MUW98_00800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_00800 PF00672 HAMP domain MUW98_00805 PF03448 MgtE intracellular N domain MUW98_00805 PF00571 CBS domain MUW98_00805 PF01769 Divalent cation transporter MUW98_00810 PF10414 Sirohaem synthase dimerisation region MUW98_00810 PF14824 Sirohaem biosynthesis protein central MUW98_00810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MUW98_00815 PF01226 Formate/nitrite transporter MUW98_00820 PF13806 Rieske-like [2Fe-2S] domain MUW98_00830 PF07992 Pyridine nucleotide-disulphide oxidoreductase MUW98_00830 PF18267 Rubredoxin NAD+ reductase C-terminal domain MUW98_00830 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MUW98_00830 PF04324 BFD-like [2Fe-2S] binding domain MUW98_00830 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MUW98_00845 PF00005 ABC transporter MUW98_00850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MUW98_00870 PF07690 Major Facilitator Superfamily MUW98_00875 PF00004 ATPase family associated with various cellular activities (AAA) MUW98_00875 PF07724 AAA domain (Cdc48 subfamily) MUW98_00875 PF10431 C-terminal, D2-small domain, of ClpB protein MUW98_00880 PF00227 Proteasome subunit MUW98_00890 PF00750 tRNA synthetases class I (R) MUW98_00890 PF05746 DALR anticodon binding domain MUW98_00890 PF03485 Arginyl tRNA synthetase N terminal domain MUW98_00900 PF04545 Sigma-70, region 4 MUW98_00900 PF04542 Sigma-70 region 2 MUW98_00905 PF12973 ChrR Cupin-like domain MUW98_00910 PF02673 Bacitracin resistance protein BacA MUW98_00915 PF00248 Aldo/keto reductase family MUW98_00920 PF01263 Aldose 1-epimerase MUW98_00925 PF10509 Galactokinase galactose-binding signature MUW98_00925 PF08544 GHMP kinases C terminal MUW98_00925 PF00288 GHMP kinases N terminal domain MUW98_00930 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain MUW98_00930 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain MUW98_00935 PF16363 GDP-mannose 4,6 dehydratase MUW98_00940 PF00356 Bacterial regulatory proteins, lacI family MUW98_00945 PF02929 Beta galactosidase small chain MUW98_00945 PF02837 Glycosyl hydrolases family 2, sugar binding domain MUW98_00945 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MUW98_00945 PF16353 Domain of unknown function(DUF4981) MUW98_00945 PF00703 Glycosyl hydrolases family 2 MUW98_00950 PF13407 Periplasmic binding protein domain MUW98_00955 PF00005 ABC transporter MUW98_00960 PF02653 Branched-chain amino acid transport system / permease component MUW98_00965 PF00672 HAMP domain MUW98_00965 PF02743 Cache domain MUW98_00965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_00970 PF00872 Transposase, Mutator family MUW98_00995 PF00696 Amino acid kinase family MUW98_01000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MUW98_01000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MUW98_01005 PF03606 C4-dicarboxylate anaerobic carrier MUW98_01010 PF02863 Arginine repressor, C-terminal domain MUW98_01010 PF01316 Arginine repressor, DNA binding domain MUW98_01015 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain MUW98_01015 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain MUW98_01020 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MUW98_01020 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MUW98_01040 PF02666 Phosphatidylserine decarboxylase MUW98_01045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_01045 PF00672 HAMP domain MUW98_01045 PF02743 Cache domain MUW98_01050 PF08212 Lipocalin-like domain MUW98_01055 PF12833 Helix-turn-helix domain MUW98_01055 PF06719 AraC-type transcriptional regulator N-terminus MUW98_01060 PF00465 Iron-containing alcohol dehydrogenase MUW98_01065 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch MUW98_01065 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MUW98_01065 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MUW98_01070 PF02233 NAD(P) transhydrogenase beta subunit MUW98_01080 PF03313 Serine dehydratase alpha chain MUW98_01085 PF00375 Sodium:dicarboxylate symporter family MUW98_01090 PF07992 Pyridine nucleotide-disulphide oxidoreductase MUW98_01090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MUW98_01095 PF13525 Outer membrane lipoprotein MUW98_01100 PF00849 RNA pseudouridylate synthase MUW98_01100 PF01479 S4 domain MUW98_01105 PF02578 Multi-copper polyphenol oxidoreductase laccase MUW98_01110 PF02861 Clp amino terminal domain, pathogenicity island component MUW98_01110 PF17871 AAA lid domain MUW98_01110 PF07724 AAA domain (Cdc48 subfamily) MUW98_01110 PF00004 ATPase family associated with various cellular activities (AAA) MUW98_01110 PF10431 C-terminal, D2-small domain, of ClpB protein MUW98_01120 PF03590 Aspartate-ammonia ligase MUW98_01125 PF01037 Lrp/AsnC ligand binding domain MUW98_01135 PF10063 Uncharacterized integral membrane protein (DUF2301) MUW98_01140 PF00571 CBS domain MUW98_01140 PF00478 IMP dehydrogenase / GMP reductase domain MUW98_01160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_01160 PF00512 His Kinase A (phospho-acceptor) domain MUW98_01170 PF00072 Response regulator receiver domain MUW98_01170 PF00158 Sigma-54 interaction domain MUW98_01175 PF06496 Protein of unknown function (DUF1097) MUW98_01180 PF00174 Oxidoreductase molybdopterin binding domain MUW98_01185 PF01794 Ferric reductase like transmembrane component MUW98_01200 PF00072 Response regulator receiver domain MUW98_01200 PF00486 Transcriptional regulatory protein, C terminal MUW98_01205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_01215 PF01568 Molydopterin dinucleotide binding domain MUW98_01215 PF00384 Molybdopterin oxidoreductase MUW98_01215 PF18364 Molybdopterin oxidoreductase N-terminal domain MUW98_01220 PF03264 NapC/NirT cytochrome c family, N-terminal region MUW98_01225 PF01131 DNA topoisomerase MUW98_01225 PF01751 Toprim domain MUW98_01240 PF12833 Helix-turn-helix domain MUW98_01240 PF12852 Cupin MUW98_01245 PF02386 Cation transport protein MUW98_01250 PF02080 TrkA-C domain MUW98_01250 PF02254 TrkA-N domain MUW98_01255 PF01565 FAD binding domain MUW98_01255 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MUW98_01260 PF08279 HTH domain MUW98_01260 PF03099 Biotin/lipoate A/B protein ligase family MUW98_01260 PF02237 Biotin protein ligase C terminal domain MUW98_01265 PF00485 Phosphoribulokinase / Uridine kinase family MUW98_01280 PF00009 Elongation factor Tu GTP binding domain MUW98_01280 PF03144 Elongation factor Tu domain 2 MUW98_01280 PF03143 Elongation factor Tu C-terminal domain MUW98_01290 PF00584 SecE/Sec61-gamma subunits of protein translocation complex MUW98_01295 PF00467 KOW motif MUW98_01295 PF02357 Transcription termination factor nusG MUW98_01300 PF00298 Ribosomal protein L11, RNA binding domain MUW98_01300 PF03946 Ribosomal protein L11, N-terminal domain MUW98_01305 PF00687 Ribosomal protein L1p/L10e family MUW98_01310 PF00466 Ribosomal protein L10 MUW98_01315 PF00542 Ribosomal protein L7/L12 C-terminal domain MUW98_01315 PF16320 Ribosomal protein L7/L12 dimerisation domain MUW98_01320 PF04565 RNA polymerase Rpb2, domain 3 MUW98_01320 PF04561 RNA polymerase Rpb2, domain 2 MUW98_01320 PF04560 RNA polymerase Rpb2, domain 7 MUW98_01320 PF04563 RNA polymerase beta subunit MUW98_01320 PF00562 RNA polymerase Rpb2, domain 6 MUW98_01320 PF10385 RNA polymerase beta subunit external 1 domain MUW98_01325 PF04983 RNA polymerase Rpb1, domain 3 MUW98_01325 PF00623 RNA polymerase Rpb1, domain 2 MUW98_01325 PF04997 RNA polymerase Rpb1, domain 1 MUW98_01325 PF05000 RNA polymerase Rpb1, domain 4 MUW98_01325 PF04998 RNA polymerase Rpb1, domain 5 MUW98_01330 PF13309 HTH domain MUW98_01330 PF08348 YheO-like PAS domain MUW98_01335 PF01042 Endoribonuclease L-PSP MUW98_01340 PF02635 DsrE/DsrF-like family MUW98_01345 PF02635 DsrE/DsrF-like family MUW98_01350 PF04077 DsrH like protein MUW98_01355 PF00164 Ribosomal protein S12/S23 MUW98_01360 PF00177 Ribosomal protein S7p/S5e MUW98_01365 PF14492 Elongation Factor G, domain II MUW98_01365 PF00009 Elongation factor Tu GTP binding domain MUW98_01365 PF03144 Elongation factor Tu domain 2 MUW98_01365 PF00679 Elongation factor G C-terminus MUW98_01365 PF03764 Elongation factor G, domain IV MUW98_01370 PF03144 Elongation factor Tu domain 2 MUW98_01370 PF00009 Elongation factor Tu GTP binding domain MUW98_01370 PF03143 Elongation factor Tu C-terminal domain MUW98_01410 PF00860 Permease family MUW98_01415 PF02733 Dak1 domain MUW98_01420 PF02734 DAK2 domain MUW98_01425 PF03610 PTS system fructose IIA component MUW98_01425 PF05524 PEP-utilising enzyme, N-terminal MUW98_01425 PF00391 PEP-utilising enzyme, mobile domain MUW98_01425 PF00381 PTS HPr component phosphorylation site MUW98_01430 PF00465 Iron-containing alcohol dehydrogenase MUW98_01435 PF00989 PAS fold MUW98_01435 PF00158 Sigma-54 interaction domain MUW98_01435 PF02954 Bacterial regulatory protein, Fis family MUW98_01440 PF03466 LysR substrate binding domain MUW98_01440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_01445 PF04371 Porphyromonas-type peptidyl-arginine deiminase MUW98_01460 PF01594 AI-2E family transporter MUW98_01465 PF00293 NUDIX domain MUW98_01490 PF00199 Catalase MUW98_01490 PF06628 Catalase-related immune-responsive MUW98_01495 PF00583 Acetyltransferase (GNAT) family MUW98_01515 PF00990 Diguanylate cyclase, GGDEF domain MUW98_01525 PF12857 TOBE-like domain MUW98_01525 PF00005 ABC transporter MUW98_01535 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_01550 PF00392 Bacterial regulatory proteins, gntR family MUW98_01550 PF07702 UTRA domain MUW98_01560 PF03466 LysR substrate binding domain MUW98_01560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_01570 PF17954 Quercetinase C-terminal cupin domain MUW98_01570 PF02678 Pirin MUW98_01575 PF07681 DoxX MUW98_01580 PF17946 RecC C-terminal domain MUW98_01585 PF00580 UvrD/REP helicase N-terminal domain MUW98_01585 PF12705 PD-(D/E)XK nuclease superfamily MUW98_01585 PF13361 UvrD-like helicase C-terminal domain MUW98_01590 PF13538 UvrD-like helicase C-terminal domain MUW98_01600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MUW98_01610 PF00990 Diguanylate cyclase, GGDEF domain MUW98_01635 PF00072 Response regulator receiver domain MUW98_01635 PF00486 Transcriptional regulatory protein, C terminal MUW98_01640 PF00672 HAMP domain MUW98_01640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_01640 PF00512 His Kinase A (phospho-acceptor) domain MUW98_01645 PF01590 GAF domain MUW98_01645 PF00990 Diguanylate cyclase, GGDEF domain MUW98_01645 PF00563 EAL domain MUW98_01645 PF00360 Phytochrome region MUW98_01650 PF07715 TonB-dependent Receptor Plug Domain MUW98_01650 PF00593 TonB dependent receptor MUW98_01655 PF00313 'Cold-shock' DNA-binding domain MUW98_01665 PF01545 Cation efflux family MUW98_01665 PF16916 Dimerisation domain of Zinc Transporter MUW98_01690 PF00816 H-NS histone family MUW98_01695 PF01381 Helix-turn-helix MUW98_01705 PF13700 Domain of unknown function (DUF4158) MUW98_01705 PF01526 Tn3 transposase DDE domain MUW98_01710 PF02796 Helix-turn-helix domain of resolvase MUW98_01710 PF00239 Resolvase, N terminal domain MUW98_01725 PF00005 ABC transporter MUW98_01735 PF13533 Biotin-lipoyl like MUW98_01740 PF00440 Bacterial regulatory proteins, tetR family MUW98_01745 PF09722 Protein of unknown function (DUF2384) MUW98_01775 PF00436 Single-strand binding protein family MUW98_01780 PF00196 Bacterial regulatory proteins, luxR family MUW98_01785 PF00005 ABC transporter MUW98_01785 PF17755 UvrA DNA-binding domain MUW98_01785 PF17760 UvrA interaction domain MUW98_01790 PF00990 Diguanylate cyclase, GGDEF domain MUW98_01795 PF03922 OmpW family MUW98_01800 PF00672 HAMP domain MUW98_01800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_01815 PF02219 Methylenetetrahydrofolate reductase MUW98_01825 PF03594 Benzoate membrane transport protein MUW98_01830 PF07883 Cupin domain MUW98_01830 PF01381 Helix-turn-helix MUW98_01860 PF04363 Protein of unknown function (DUF496) MUW98_01870 PF04751 Protein of unknown function (DUF615) MUW98_01875 PF01523 Putative modulator of DNA gyrase MUW98_01880 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MUW98_01885 PF01722 BolA-like protein MUW98_01895 PF05494 MlaC protein MUW98_01900 PF02470 MlaD protein MUW98_01905 PF02405 Permease MlaE MUW98_01910 PF00005 ABC transporter MUW98_01915 PF01380 SIS domain MUW98_01915 PF00571 CBS domain MUW98_01925 PF06835 Lipopolysaccharide-assembly, LptC-related MUW98_01930 PF03968 OstA-like protein MUW98_01935 PF00005 ABC transporter MUW98_01935 PF12399 Branched-chain amino acid ATP-binding cassette transporter MUW98_01940 PF00309 Sigma-54 factor, Activator interacting domain (AID) MUW98_01940 PF04963 Sigma-54 factor, core binding domain MUW98_01940 PF04552 Sigma-54, DNA binding domain MUW98_01945 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MUW98_01950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MUW98_01955 PF03668 P-loop ATPase protein family MUW98_01960 PF00381 PTS HPr component phosphorylation site MUW98_01965 PF00874 PRD domain MUW98_01965 PF08279 HTH domain MUW98_01965 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MUW98_01965 PF05043 Mga helix-turn-helix domain MUW98_01970 PF07071 KDGP aldolase MUW98_01975 PF03841 L-seryl-tRNA selenium transferase MUW98_01980 PF01979 Amidohydrolase family MUW98_02010 PF13180 PDZ domain MUW98_02015 PF00595 PDZ domain MUW98_02015 PF13180 PDZ domain MUW98_02025 PF03969 AFG1-like ATPase MUW98_02030 PF00572 Ribosomal protein L13 MUW98_02035 PF00380 Ribosomal protein S9/S16 MUW98_02040 PF00355 Rieske [2Fe-2S] domain MUW98_02040 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal MUW98_02045 PF00032 Cytochrome b(C-terminal)/b6/petD MUW98_02045 PF00033 Cytochrome b/b6/petB MUW98_02050 PF02167 Cytochrome C1 family MUW98_02055 PF00043 Glutathione S-transferase, C-terminal domain MUW98_02055 PF02798 Glutathione S-transferase, N-terminal domain MUW98_02060 PF04386 Stringent starvation protein B MUW98_02065 PF04972 BON domain MUW98_02070 PF13580 SIS domain MUW98_02075 PF02021 Uncharacterised protein family UPF0102 MUW98_02080 PF04348 LppC putative lipoprotein MUW98_02085 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MUW98_02095 PF02381 MraZ protein, putative antitoxin-like MUW98_02100 PF01795 MraW methylase family MUW98_02105 PF04999 Cell division protein FtsL MUW98_02110 PF00905 Penicillin binding protein transpeptidase domain MUW98_02110 PF03717 Penicillin-binding Protein dimerisation domain MUW98_02115 PF01225 Mur ligase family, catalytic domain MUW98_02115 PF08245 Mur ligase middle domain MUW98_02115 PF02875 Mur ligase family, glutamate ligase domain MUW98_02120 PF01225 Mur ligase family, catalytic domain MUW98_02120 PF02875 Mur ligase family, glutamate ligase domain MUW98_02120 PF08245 Mur ligase middle domain MUW98_02125 PF00953 Glycosyl transferase family 4 MUW98_02125 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 MUW98_02130 PF08245 Mur ligase middle domain MUW98_02130 PF02875 Mur ligase family, glutamate ligase domain MUW98_02135 PF01098 Cell cycle protein MUW98_02140 PF03033 Glycosyltransferase family 28 N-terminal domain MUW98_02140 PF04101 Glycosyltransferase family 28 C-terminal domain MUW98_02145 PF01225 Mur ligase family, catalytic domain MUW98_02145 PF02875 Mur ligase family, glutamate ligase domain MUW98_02145 PF08245 Mur ligase middle domain MUW98_02150 PF08478 POTRA domain, FtsQ-type MUW98_02150 PF03799 Cell division protein FtsQ MUW98_02155 PF02491 SHS2 domain inserted in FTSA MUW98_02160 PF00091 Tubulin/FtsZ family, GTPase domain MUW98_02160 PF12327 FtsZ family, C-terminal domain MUW98_02165 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase MUW98_02175 PF07517 SecA DEAD-like domain MUW98_02175 PF01043 SecA preprotein cross-linking domain MUW98_02175 PF07516 SecA Wing and Scaffold domain MUW98_02175 PF02810 SEC-C motif MUW98_02185 PF00293 NUDIX domain MUW98_02190 PF03884 DNA gyrase inhibitor YacG MUW98_02195 PF07072 Cell division protein MUW98_02200 PF01121 Dephospho-CoA kinase MUW98_02205 PF06750 Bacterial Peptidase A24 N-terminal domain MUW98_02205 PF01478 Type IV leader peptidase family MUW98_02210 PF00482 Type II secretion system (T2SS), protein F MUW98_02215 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MUW98_02215 PF00437 Type II/IV secretion system protein MUW98_02220 PF07963 Prokaryotic N-terminal methylation motif MUW98_02225 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain MUW98_02225 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain MUW98_02235 PF01510 N-acetylmuramoyl-L-alanine amidase MUW98_02240 PF07729 FCD domain MUW98_02240 PF00392 Bacterial regulatory proteins, gntR family MUW98_02245 PF00456 Transketolase, thiamine diphosphate binding domain MUW98_02245 PF17831 Pyruvate dehydrogenase E1 component middle domain MUW98_02250 PF02817 e3 binding domain MUW98_02250 PF00364 Biotin-requiring enzyme MUW98_02250 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MUW98_02255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MUW98_02255 PF07992 Pyridine nucleotide-disulphide oxidoreductase MUW98_02265 PF00672 HAMP domain MUW98_02265 PF12729 Four helix bundle sensory module for signal transduction MUW98_02265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_02270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_02270 PF00672 HAMP domain MUW98_02270 PF12729 Four helix bundle sensory module for signal transduction MUW98_02275 PF01734 Patatin-like phospholipase MUW98_02280 PF11791 Aconitate B N-terminal domain MUW98_02280 PF06434 Aconitate hydratase 2 N-terminus MUW98_02280 PF00330 Aconitase family (aconitate hydratase) MUW98_02285 PF12792 CSS motif domain associated with EAL MUW98_02285 PF00563 EAL domain MUW98_02290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_02290 PF03466 LysR substrate binding domain MUW98_02295 PF01810 LysE type translocator MUW98_02300 PF01565 FAD binding domain MUW98_02300 PF04030 D-arabinono-1,4-lactone oxidase MUW98_02305 PF02492 CobW/HypB/UreG, nucleotide-binding domain MUW98_02305 PF07683 Cobalamin synthesis protein cobW C-terminal domain MUW98_02310 PF07690 Major Facilitator Superfamily MUW98_02320 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MUW98_02325 PF02152 Dihydroneopterin aldolase MUW98_02330 PF02660 Glycerol-3-phosphate acyltransferase MUW98_02375 PF01584 CheW-like domain MUW98_02375 PF00072 Response regulator receiver domain MUW98_02380 PF00106 short chain dehydrogenase MUW98_02385 PF13718 GNAT acetyltransferase 2 MUW98_02385 PF05127 Helicase MUW98_02385 PF17176 tRNA-binding domain MUW98_02385 PF08351 Domain of unknown function (DUF1726) MUW98_02400 PF00210 Ferritin-like domain MUW98_02410 PF02142 MGS-like domain MUW98_02425 PF00710 Asparaginase, N-terminal MUW98_02425 PF17763 Glutaminase/Asparaginase C-terminal domain MUW98_02440 PF00356 Bacterial regulatory proteins, lacI family MUW98_02445 PF00367 phosphotransferase system, EIIB MUW98_02445 PF02378 Phosphotransferase system, EIIC MUW98_02450 PF00128 Alpha amylase, catalytic domain MUW98_02450 PF11941 Domain of unknown function (DUF3459) MUW98_02455 PF14602 Hexapeptide repeat of succinyl-transferase MUW98_02455 PF12464 Maltose acetyltransferase MUW98_02460 PF01037 Lrp/AsnC ligand binding domain MUW98_02465 PF00892 EamA-like transporter family MUW98_02475 PF00171 Aldehyde dehydrogenase family MUW98_02480 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_02485 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_02490 PF00005 ABC transporter MUW98_02490 PF08402 TOBE domain MUW98_02495 PF13416 Bacterial extracellular solute-binding protein MUW98_02500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_02500 PF03466 LysR substrate binding domain MUW98_02505 PF03553 Na+/H+ antiporter family MUW98_02545 PF08323 Starch synthase catalytic domain MUW98_02545 PF00534 Glycosyl transferases group 1 MUW98_02550 PF00483 Nucleotidyl transferase MUW98_02555 PF08468 Methyltransferase small domain N-terminal MUW98_02555 PF05175 Methyltransferase small domain MUW98_02560 PF00701 Dihydrodipicolinate synthetase family MUW98_02565 PF00990 Diguanylate cyclase, GGDEF domain MUW98_02565 PF01590 GAF domain MUW98_02565 PF00563 EAL domain MUW98_02565 PF00360 Phytochrome region MUW98_02575 PF13419 Haloacid dehalogenase-like hydrolase MUW98_02580 PF17209 Hfq protein MUW98_02585 PF04403 Paraquat-inducible protein A MUW98_02590 PF02470 MlaD protein MUW98_02595 PF03886 ABC-type transport auxiliary lipoprotein component MUW98_02600 PF00691 OmpA family MUW98_02600 PF01389 OmpA-like transmembrane domain MUW98_02610 PF00657 GDSL-like Lipase/Acylhydrolase MUW98_02615 PF04076 Bacterial OB fold (BOF) protein MUW98_02620 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain MUW98_02620 PF01464 Transglycosylase SLT domain MUW98_02625 PF04362 Bacterial Fe(2+) trafficking MUW98_02630 PF14815 NUDIX domain MUW98_02630 PF10576 Iron-sulfur binding domain of endonuclease III MUW98_02630 PF00633 Helix-hairpin-helix motif MUW98_02630 PF00730 HhH-GPD superfamily base excision DNA repair protein MUW98_02635 PF16537 Type II secretion system protein B MUW98_02640 PF13401 AAA domain MUW98_02640 PF01471 Putative peptidoglycan binding domain MUW98_02645 PF01966 HD domain MUW98_02645 PF01743 Poly A polymerase head domain MUW98_02645 PF12627 Probable RNA and SrmB- binding site of polymerase A MUW98_02660 PF04172 LrgB-like family MUW98_02665 PF03788 LrgA family MUW98_02670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_02670 PF03466 LysR substrate binding domain MUW98_02675 PF00155 Aminotransferase class I and II MUW98_02675 PF00392 Bacterial regulatory proteins, gntR family MUW98_02695 PF07350 Protein of unknown function (DUF1479) MUW98_02700 PF04073 Aminoacyl-tRNA editing domain MUW98_02705 PF01384 Phosphate transporter family MUW98_02710 PF01865 Protein of unknown function DUF47 MUW98_02725 PF03279 Bacterial lipid A biosynthesis acyltransferase MUW98_02730 PF01467 Cytidylyltransferase-like MUW98_02730 PF00294 pfkB family carbohydrate kinase MUW98_02735 PF02321 Outer membrane efflux protein MUW98_02740 PF00293 NUDIX domain MUW98_02745 PF06853 Protein of unknown function (DUF1249) MUW98_02750 PF00149 Calcineurin-like phosphoesterase MUW98_02755 PF05728 Uncharacterised protein family (UPF0227) MUW98_02760 PF00293 NUDIX domain MUW98_02770 PF07869 Protein of unknown function (DUF1656) MUW98_02775 PF00529 HlyD membrane-fusion protein of T1SS MUW98_02775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MUW98_02780 PF04632 Fusaric acid resistance protein family MUW98_02785 PF01751 Toprim domain MUW98_02785 PF00986 DNA gyrase B subunit, carboxyl terminus MUW98_02785 PF00204 DNA gyrase B MUW98_02785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_02790 PF03989 DNA gyrase C-terminal domain, beta-propeller MUW98_02790 PF00521 DNA gyrase/topoisomerase IV, subunit A MUW98_02805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_02805 PF03466 LysR substrate binding domain MUW98_02810 PF07690 Major Facilitator Superfamily MUW98_02845 PF00226 DnaJ domain MUW98_02845 PF00684 DnaJ central domain MUW98_02845 PF01556 DnaJ C terminal domain MUW98_02850 PF00578 AhpC/TSA family MUW98_02875 PF01553 Acyltransferase MUW98_02880 PF04012 PspA/IM30 family MUW98_02895 PF01541 GIY-YIG catalytic domain MUW98_02905 PF00892 EamA-like transporter family MUW98_02910 PF03167 Uracil DNA glycosylase superfamily MUW98_02915 PF00892 EamA-like transporter family MUW98_02920 PF03466 LysR substrate binding domain MUW98_02920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_02925 PF00950 ABC 3 transport family MUW98_02930 PF00005 ABC transporter MUW98_02935 PF01297 Zinc-uptake complex component A periplasmic MUW98_02955 PF01476 LysM domain MUW98_02955 PF08525 Opacity-associated protein A N-terminal motif MUW98_02955 PF01551 Peptidase family M23 MUW98_02960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MUW98_02965 PF04222 Protein of unknown function (DUF416) MUW98_02980 PF02028 BCCT, betaine/carnitine/choline family transporter MUW98_02985 PF00488 MutS domain V MUW98_02985 PF05192 MutS domain III MUW98_02985 PF01624 MutS domain I MUW98_02985 PF05190 MutS family domain IV MUW98_02985 PF05188 MutS domain II MUW98_02990 PF02464 Competence-damaged protein MUW98_02995 PF00154 recA bacterial DNA recombination protein MUW98_03000 PF02631 RecX family MUW98_03005 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MUW98_03005 PF01411 tRNA synthetases class II (A) MUW98_03005 PF02272 DHHA1 domain MUW98_03010 PF01842 ACT domain MUW98_03010 PF13840 ACT domain MUW98_03010 PF00696 Amino acid kinase family MUW98_03015 PF02599 Global regulator protein family MUW98_03055 PF00768 D-alanyl-D-alanine carboxypeptidase MUW98_03060 PF09335 SNARE associated Golgi protein MUW98_03065 PF00571 CBS domain MUW98_03065 PF03471 Transporter associated domain MUW98_03065 PF01595 Cyclin M transmembrane N-terminal domain MUW98_03070 PF08264 Anticodon-binding domain of tRNA MUW98_03070 PF00133 tRNA synthetases class I (I, L, M and V) MUW98_03070 PF10458 Valyl tRNA synthetase tRNA binding arm MUW98_03075 PF04364 DNA polymerase III chi subunit, HolC MUW98_03080 PF02789 Cytosol aminopeptidase family, N-terminal domain MUW98_03080 PF00883 Cytosol aminopeptidase family, catalytic domain MUW98_03085 PF03739 Lipopolysaccharide export system permease LptF/LptG MUW98_03090 PF03739 Lipopolysaccharide export system permease LptF/LptG MUW98_03105 PF13356 Arm DNA-binding domain MUW98_03105 PF00589 Phage integrase family MUW98_03165 PF02899 Phage integrase, N-terminal SAM-like domain MUW98_03165 PF00589 Phage integrase family MUW98_03230 PF07669 Eco57I restriction-modification methylase MUW98_03230 PF12950 TaqI-like C-terminal specificity domain MUW98_03250 PF05840 Bacteriophage replication gene A protein (GPA) MUW98_03405 PF00909 Ammonium Transporter Family MUW98_03410 PF01938 TRAM domain MUW98_03410 PF05958 tRNA (Uracil-5-)-methyltransferase MUW98_03420 PF07963 Prokaryotic N-terminal methylation motif MUW98_03425 PF01026 TatD related DNase MUW98_03430 PF07670 Nucleoside recognition MUW98_03430 PF07662 Na+ dependent nucleoside transporter C-terminus MUW98_03430 PF01773 Na+ dependent nucleoside transporter N-terminus MUW98_03440 PF01791 DeoC/LacD family aldolase MUW98_03445 PF02885 Glycosyl transferase family, helical bundle domain MUW98_03445 PF00591 Glycosyl transferase family, a/b domain MUW98_03445 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain MUW98_03450 PF01676 Metalloenzyme superfamily MUW98_03455 PF01048 Phosphorylase superfamily MUW98_03460 PF00990 Diguanylate cyclase, GGDEF domain MUW98_03460 PF00563 EAL domain MUW98_03460 PF13426 PAS domain MUW98_03460 PF08447 PAS fold MUW98_03460 PF05231 MASE1 MUW98_03460 PF08448 PAS fold MUW98_03470 PF18429 Domain of unknown function (DUF5609) MUW98_03485 PF18073 Rubredoxin metal binding domain MUW98_03490 PF07238 PilZ domain MUW98_03495 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ MUW98_03505 PF00216 Bacterial DNA-binding protein MUW98_03520 PF01207 Dihydrouridine synthase (Dus) MUW98_03525 PF01475 Ferric uptake regulator family MUW98_03540 PF05525 Branched-chain amino acid transport protein MUW98_03545 PF05525 Branched-chain amino acid transport protein MUW98_03550 PF05175 Methyltransferase small domain MUW98_03555 PF00271 Helicase conserved C-terminal domain MUW98_03555 PF00270 DEAD/DEAH box helicase MUW98_03560 PF03883 Peroxide stress protein YaaA MUW98_03565 PF00437 Type II/IV secretion system protein MUW98_03570 PF00437 Type II/IV secretion system protein MUW98_03575 PF01168 Alanine racemase, N-terminal domain MUW98_03580 PF03807 NADP oxidoreductase coenzyme F420-dependent MUW98_03580 PF14748 Pyrroline-5-carboxylate reductase dimerisation MUW98_03585 PF02325 YGGT family MUW98_03590 PF02594 Uncharacterised ACR, YggU family COG1872 MUW98_03605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MUW98_03615 PF00132 Bacterial transferase hexapeptide (six repeats) MUW98_03620 PF10952 Protein of unknown function (DUF2753) MUW98_03625 PF00378 Enoyl-CoA hydratase/isomerase MUW98_03640 PF00106 short chain dehydrogenase MUW98_03645 PF03129 Anticodon binding domain MUW98_03645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MUW98_03645 PF04073 Aminoacyl-tRNA editing domain MUW98_03650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_03650 PF00672 HAMP domain MUW98_03655 PF07499 RuvA, C-terminal domain MUW98_03655 PF01330 RuvA N terminal domain MUW98_03660 PF05496 Holliday junction DNA helicase RuvB P-loop domain MUW98_03660 PF05491 RuvB C-terminal winged helix domain MUW98_03660 PF17864 RuvB AAA lid domain MUW98_03665 PF01654 Cytochrome bd terminal oxidase subunit I MUW98_03670 PF02322 Cytochrome bd terminal oxidase subunit II MUW98_03675 PF08173 Membrane bound YbgT-like protein MUW98_03680 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) MUW98_03685 PF03061 Thioesterase superfamily MUW98_03690 PF01618 MotA/TolQ/ExbB proton channel family MUW98_03695 PF02472 Biopolymer transport protein ExbD/TolR MUW98_03705 PF07676 WD40-like Beta Propeller Repeat MUW98_03705 PF04052 TolB amino-terminal domain MUW98_03710 PF00691 OmpA family MUW98_03715 PF16331 TolA binding protein trimerisation MUW98_03715 PF13174 Tetratricopeptide repeat MUW98_03760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_03760 PF00672 HAMP domain MUW98_03765 PF02445 Quinolinate synthetase A protein MUW98_03770 PF01263 Aldose 1-epimerase MUW98_03775 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MUW98_03775 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MUW98_03780 PF02446 4-alpha-glucanotransferase MUW98_03785 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MUW98_03785 PF00128 Alpha amylase, catalytic domain MUW98_03785 PF02806 Alpha amylase, C-terminal all-beta domain MUW98_03790 PF00128 Alpha amylase, catalytic domain MUW98_03790 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MUW98_03795 PF01641 SelR domain MUW98_03805 PF00293 NUDIX domain MUW98_03810 PF16884 N-terminal domain of oxidoreductase MUW98_03810 PF00107 Zinc-binding dehydrogenase MUW98_03815 PF02566 OsmC-like protein MUW98_03820 PF01047 MarR family MUW98_03830 PF00665 Integrase core domain MUW98_03835 PF01695 IstB-like ATP binding protein MUW98_03845 PF01037 Lrp/AsnC ligand binding domain MUW98_03860 PF07690 Major Facilitator Superfamily MUW98_03880 PF00209 Sodium:neurotransmitter symporter family MUW98_03890 PF00209 Sodium:neurotransmitter symporter family MUW98_03915 PF00155 Aminotransferase class I and II MUW98_03915 PF00392 Bacterial regulatory proteins, gntR family MUW98_03925 PF01810 LysE type translocator MUW98_03930 PF01177 Asp/Glu/Hydantoin racemase MUW98_03935 PF00394 Multicopper oxidase MUW98_03935 PF07731 Multicopper oxidase MUW98_03935 PF07732 Multicopper oxidase MUW98_03945 PF04074 YhcH/YjgK/YiaL MUW98_03950 PF00871 Acetokinase family MUW98_03955 PF00924 Mechanosensitive ion channel MUW98_03960 PF17969 L,D-transpeptidase C-terminal domain MUW98_03960 PF03734 L,D-transpeptidase catalytic domain MUW98_03965 PF00474 Sodium:solute symporter family MUW98_03970 PF00561 alpha/beta hydrolase fold MUW98_03990 PF02525 Flavodoxin-like fold MUW98_03995 PF03466 LysR substrate binding domain MUW98_03995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_04000 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ MUW98_04010 PF00005 ABC transporter MUW98_04010 PF12848 ABC transporter MUW98_04015 PF01380 SIS domain MUW98_04015 PF00571 CBS domain MUW98_04020 PF01957 NfeD-like C-terminal, partner-binding MUW98_04025 PF01145 SPFH domain / Band 7 family MUW98_04025 PF16200 C-terminal region of band_7 MUW98_04030 PF10414 Sirohaem synthase dimerisation region MUW98_04030 PF14824 Sirohaem biosynthesis protein central MUW98_04030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MUW98_04035 PF01507 Phosphoadenosine phosphosulfate reductase family MUW98_04040 PF00009 Elongation factor Tu GTP binding domain MUW98_04045 PF02080 TrkA-C domain MUW98_04045 PF03600 Citrate transporter MUW98_04085 PF08447 PAS fold MUW98_04085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_04105 PF00005 ABC transporter MUW98_04120 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) MUW98_04135 PF00719 Inorganic pyrophosphatase MUW98_04140 PF08245 Mur ligase middle domain MUW98_04140 PF02875 Mur ligase family, glutamate ligase domain MUW98_04140 PF01225 Mur ligase family, catalytic domain MUW98_04145 PF02441 Flavoprotein MUW98_04150 PF00440 Bacterial regulatory proteins, tetR family MUW98_04155 PF00156 Phosphoribosyl transferase domain MUW98_04160 PF00005 ABC transporter MUW98_04165 PF01061 ABC-2 type transporter MUW98_04170 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component MUW98_04175 PF01869 BadF/BadG/BcrA/BcrD ATPase family MUW98_04195 PF02569 Pantoate-beta-alanine ligase MUW98_04200 PF02548 Ketopantoate hydroxymethyltransferase MUW98_04205 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MUW98_04210 PF01743 Poly A polymerase head domain MUW98_04210 PF12626 Polymerase A arginine-rich C-terminus MUW98_04210 PF12627 Probable RNA and SrmB- binding site of polymerase A MUW98_04215 PF00749 tRNA synthetases class I (E and Q), catalytic domain MUW98_04220 PF01258 Prokaryotic dksA/traR C4-type zinc finger MUW98_04225 PF03749 Sugar fermentation stimulation protein RE domain MUW98_04225 PF17746 SfsA N-terminal OB domain MUW98_04235 PF04408 Helicase associated domain (HA2) MUW98_04235 PF08482 ATP-dependent helicase C-terminal MUW98_04235 PF00271 Helicase conserved C-terminal domain MUW98_04235 PF00270 DEAD/DEAH box helicase MUW98_04240 PF00905 Penicillin binding protein transpeptidase domain MUW98_04240 PF00912 Transglycosylase MUW98_04240 PF14814 Bifunctional transglycosylase second domain MUW98_04245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MUW98_04250 PF00893 Small Multidrug Resistance protein MUW98_04255 PF00893 Small Multidrug Resistance protein MUW98_04265 PF11849 Domain of unknown function (DUF3369) MUW98_04275 PF01569 PAP2 superfamily MUW98_04290 PF00202 Aminotransferase class-III MUW98_04295 PF00654 Voltage gated chloride channel MUW98_04305 PF01521 Iron-sulphur cluster biosynthesis MUW98_04340 PF02954 Bacterial regulatory protein, Fis family MUW98_04345 PF01207 Dihydrouridine synthase (Dus) MUW98_04350 PF02321 Outer membrane efflux protein MUW98_04355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MUW98_04385 PF00072 Response regulator receiver domain MUW98_04390 PF00854 POT family MUW98_04395 PF00483 Nucleotidyl transferase MUW98_04405 PF00459 Inositol monophosphatase family MUW98_04410 PF03795 YCII-related domain MUW98_04415 PF04279 Intracellular septation protein A MUW98_04420 PF00282 Pyridoxal-dependent decarboxylase conserved domain MUW98_04425 PF03006 Haemolysin-III related MUW98_04430 PF06826 Predicted Permease Membrane Region MUW98_04430 PF02080 TrkA-C domain MUW98_04440 PF01584 CheW-like domain MUW98_04440 PF00072 Response regulator receiver domain MUW98_04445 PF13472 GDSL-like Lipase/Acylhydrolase family MUW98_04450 PF00005 ABC transporter MUW98_04460 PF08338 Domain of unknown function (DUF1731) MUW98_04460 PF01370 NAD dependent epimerase/dehydratase family MUW98_04465 PF12792 CSS motif domain associated with EAL MUW98_04465 PF00563 EAL domain MUW98_04470 PF00155 Aminotransferase class I and II MUW98_04475 PF01483 Proprotein convertase P-domain MUW98_04475 PF04389 Peptidase family M28 MUW98_04480 PF02390 Putative methyltransferase MUW98_04485 PF04320 Protein with unknown function (DUF469) MUW98_04490 PF04960 Glutaminase MUW98_04495 PF00581 Rhodanese-like domain MUW98_04500 PF06004 Bacterial protein of unknown function (DUF903) MUW98_04505 PF00664 ABC transporter transmembrane region MUW98_04505 PF00005 ABC transporter MUW98_04510 PF00561 alpha/beta hydrolase fold MUW98_04525 PF00589 Phage integrase family MUW98_04545 PF05154 TM2 domain MUW98_04565 PF00589 Phage integrase family MUW98_04565 PF02899 Phage integrase, N-terminal SAM-like domain MUW98_04630 PF02661 Fic/DOC family MUW98_04635 PF05547 Immune inhibitor A peptidase M6 MUW98_04635 PF00801 PKD domain MUW98_04640 PF06877 Regulator of ribonuclease activity B MUW98_04645 PF00563 EAL domain MUW98_04645 PF00990 Diguanylate cyclase, GGDEF domain MUW98_04645 PF03707 Bacterial signalling protein N terminal repeat MUW98_04655 PF12852 Cupin MUW98_04655 PF12833 Helix-turn-helix domain MUW98_04660 PF02627 Carboxymuconolactone decarboxylase family MUW98_04665 PF04224 Protein of unknown function, DUF417 MUW98_04685 PF09905 DNA-binding protein VF530 MUW98_04690 PF02666 Phosphatidylserine decarboxylase MUW98_04695 PF03193 RsgA GTPase MUW98_04700 PF00929 Exonuclease MUW98_04740 PF00313 'Cold-shock' DNA-binding domain MUW98_04750 PF00672 HAMP domain MUW98_04750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_04755 PF00749 tRNA synthetases class I (E and Q), catalytic domain MUW98_04790 PF00704 Glycosyl hydrolases family 18 MUW98_04790 PF06483 Chitinase C MUW98_04805 PF02472 Biopolymer transport protein ExbD/TolR MUW98_04810 PF01618 MotA/TolQ/ExbB proton channel family MUW98_04815 PF01618 MotA/TolQ/ExbB proton channel family MUW98_04825 PF07715 TonB-dependent Receptor Plug Domain MUW98_04825 PF00593 TonB dependent receptor MUW98_04830 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_04835 PF12911 N-terminal TM domain of oligopeptide transport permease C MUW98_04835 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_04845 PF00005 ABC transporter MUW98_04845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MUW98_04850 PF00005 ABC transporter MUW98_04850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MUW98_04855 PF07687 Peptidase dimerisation domain MUW98_04855 PF01546 Peptidase family M20/M25/M40 MUW98_04860 PF00156 Phosphoribosyl transferase domain MUW98_04865 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) MUW98_04870 PF07417 Sigma factor-binding transcriptional regulator Crl MUW98_04875 PF01472 PUA domain MUW98_04875 PF00696 Amino acid kinase family MUW98_04880 PF00171 Aldehyde dehydrogenase family MUW98_04890 PF00582 Universal stress protein family MUW98_04905 PF00294 pfkB family carbohydrate kinase MUW98_04910 PF04227 Indigoidine synthase A like protein MUW98_04915 PF00194 Eukaryotic-type carbonic anhydrase MUW98_04920 PF00034 Cytochrome c MUW98_04920 PF03150 Di-haem cytochrome c peroxidase MUW98_04955 PF00550 Phosphopantetheine attachment site MUW98_04960 PF00550 Phosphopantetheine attachment site MUW98_04970 PF00501 AMP-binding enzyme MUW98_04970 PF13193 AMP-binding enzyme C-terminal domain MUW98_04975 PF07977 FabA-like domain MUW98_04985 PF00221 Aromatic amino acid lyase MUW98_05010 PF00109 Beta-ketoacyl synthase, N-terminal domain MUW98_05010 PF02801 Beta-ketoacyl synthase, C-terminal domain MUW98_05025 PF00109 Beta-ketoacyl synthase, N-terminal domain MUW98_05025 PF02801 Beta-ketoacyl synthase, C-terminal domain MUW98_05035 PF00994 Probable molybdopterin binding domain MUW98_05045 PF06738 Putative threonine/serine exporter MUW98_05050 PF12821 Threonine/Serine exporter, ThrE MUW98_05055 PF00186 Dihydrofolate reductase MUW98_05060 PF00571 CBS domain MUW98_05060 PF00005 ABC transporter MUW98_05065 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_05070 PF04069 Substrate binding domain of ABC-type glycine betaine transport system MUW98_05075 PF01507 Phosphoadenosine phosphosulfate reductase family MUW98_05080 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MUW98_05080 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MUW98_05085 PF00175 Oxidoreductase NAD-binding domain MUW98_05085 PF00258 Flavodoxin MUW98_05085 PF00667 FAD binding domain MUW98_05090 PF02567 Phenazine biosynthesis-like protein MUW98_05095 PF01336 OB-fold nucleic acid binding domain MUW98_05095 PF00152 tRNA synthetases class II (D, K and N) MUW98_05105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_05105 PF00672 HAMP domain MUW98_05105 PF02743 Cache domain MUW98_05110 PF03616 Sodium/glutamate symporter MUW98_05115 PF17763 Glutaminase/Asparaginase C-terminal domain MUW98_05115 PF00710 Asparaginase, N-terminal MUW98_05120 PF07023 Protein of unknown function (DUF1315) MUW98_05125 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MUW98_05125 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MUW98_05140 PF01343 Peptidase family S49 MUW98_05145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MUW98_05145 PF07992 Pyridine nucleotide-disulphide oxidoreductase MUW98_05150 PF00881 Nitroreductase family MUW98_05165 PF14602 Hexapeptide repeat of succinyl-transferase MUW98_05165 PF12464 Maltose acetyltransferase MUW98_05170 PF01842 ACT domain MUW98_05170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MUW98_05170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MUW98_05180 PF00107 Zinc-binding dehydrogenase MUW98_05180 PF08240 Alcohol dehydrogenase GroES-like domain MUW98_05185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_05185 PF03466 LysR substrate binding domain MUW98_05190 PF02378 Phosphotransferase system, EIIC MUW98_05190 PF00367 phosphotransferase system, EIIB MUW98_05190 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MUW98_05195 PF00474 Sodium:solute symporter family MUW98_05205 PF00289 Biotin carboxylase, N-terminal domain MUW98_05205 PF02785 Biotin carboxylase C-terminal domain MUW98_05205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MUW98_05210 PF00364 Biotin-requiring enzyme MUW98_05215 PF01220 Dehydroquinase class II MUW98_05220 PF00501 AMP-binding enzyme MUW98_05220 PF16177 Acetyl-coenzyme A synthetase N-terminus MUW98_05220 PF13193 AMP-binding enzyme C-terminal domain MUW98_05230 PF00563 EAL domain MUW98_05230 PF13188 PAS domain MUW98_05230 PF03707 Bacterial signalling protein N terminal repeat MUW98_05230 PF00990 Diguanylate cyclase, GGDEF domain MUW98_05250 PF02613 Nitrate reductase delta subunit MUW98_05265 PF00464 Serine hydroxymethyltransferase MUW98_05275 PF03477 ATP cone domain MUW98_05280 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MUW98_05280 PF01872 RibD C-terminal domain MUW98_05285 PF00677 Lumazine binding domain MUW98_05290 PF00925 GTP cyclohydrolase II MUW98_05290 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MUW98_05300 PF00885 6,7-dimethyl-8-ribityllumazine synthase MUW98_05305 PF01029 NusB family MUW98_05310 PF02769 AIR synthase related protein, C-terminal domain MUW98_05310 PF00586 AIR synthase related protein, N-terminal domain MUW98_05315 PF04608 Phosphatidylglycerophosphatase A MUW98_05320 PF00005 ABC transporter MUW98_05320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MUW98_05325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MUW98_05330 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_05335 PF12911 N-terminal TM domain of oligopeptide transport permease C MUW98_05335 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_05340 PF02779 Transketolase, pyrimidine binding domain MUW98_05340 PF02780 Transketolase, C-terminal domain MUW98_05340 PF13292 1-deoxy-D-xylulose-5-phosphate synthase MUW98_05345 PF00348 Polyprenyl synthetase MUW98_05350 PF02609 Exonuclease VII small subunit MUW98_05355 PF01618 MotA/TolQ/ExbB proton channel family MUW98_05360 PF13677 Membrane MotB of proton-channel complex MotA/MotB MUW98_05360 PF00691 OmpA family MUW98_05365 PF03449 Transcription elongation factor, N-terminal MUW98_05365 PF01272 Transcription elongation factor, GreA/GreB, C-term MUW98_05375 PF01985 CRS1 / YhbY (CRM) domain MUW98_05380 PF01728 FtsJ-like methyltransferase MUW98_05385 PF00004 ATPase family associated with various cellular activities (AAA) MUW98_05385 PF17862 AAA+ lid domain MUW98_05385 PF06480 FtsH Extracellular MUW98_05385 PF01434 Peptidase family M41 MUW98_05390 PF00809 Pterin binding enzyme MUW98_05395 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MUW98_05395 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MUW98_05395 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MUW98_05395 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MUW98_05400 PF00121 Triosephosphate isomerase MUW98_05405 PF03840 Preprotein translocase SecG subunit MUW98_05420 PF02576 RimP N-terminal domain MUW98_05420 PF17384 RimP C-terminal SH3 domain MUW98_05425 PF08529 NusA N-terminal domain MUW98_05425 PF00575 S1 RNA binding domain MUW98_05425 PF13184 NusA-like KH domain MUW98_05430 PF04760 Translation initiation factor IF-2, N-terminal region MUW98_05430 PF00009 Elongation factor Tu GTP binding domain MUW98_05430 PF11987 Translation-initiation factor 2 MUW98_05430 PF08364 Bacterial translation initiation factor IF-2 associated region MUW98_05435 PF02033 Ribosome-binding factor A MUW98_05440 PF09157 Pseudouridine synthase II TruB, C-terminal MUW98_05440 PF01509 TruB family pseudouridylate synthase (N terminal domain) MUW98_05440 PF16198 tRNA pseudouridylate synthase B C-terminal domain MUW98_05445 PF00312 Ribosomal protein S15 MUW98_05450 PF00013 KH domain MUW98_05450 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MUW98_05450 PF01138 3' exoribonuclease family, domain 1 MUW98_05450 PF03725 3' exoribonuclease family, domain 2 MUW98_05450 PF00575 S1 RNA binding domain MUW98_05455 PF07690 Major Facilitator Superfamily MUW98_05460 PF00563 EAL domain MUW98_05460 PF00990 Diguanylate cyclase, GGDEF domain MUW98_05460 PF03707 Bacterial signalling protein N terminal repeat MUW98_05465 PF02635 DsrE/DsrF-like family MUW98_05475 PF10415 Fumarase C C-terminus MUW98_05475 PF00206 Lyase MUW98_05480 PF03575 Peptidase family S51 MUW98_05485 PF13722 5TM C-terminal transporter carbon starvation CstA MUW98_05485 PF02554 Carbon starvation protein CstA MUW98_05490 PF04397 LytTr DNA-binding domain MUW98_05490 PF00072 Response regulator receiver domain MUW98_05495 PF07694 5TMR of 5TMR-LYT MUW98_05495 PF06580 Histidine kinase MUW98_05500 PF00196 Bacterial regulatory proteins, luxR family MUW98_05500 PF00072 Response regulator receiver domain MUW98_05505 PF00989 PAS fold MUW98_05505 PF00512 His Kinase A (phospho-acceptor) domain MUW98_05505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_05510 PF13247 4Fe-4S dicluster domain MUW98_05515 PF03916 Polysulphide reductase, NrfD MUW98_05520 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MUW98_05520 PF00384 Molybdopterin oxidoreductase MUW98_05520 PF01568 Molydopterin dinucleotide binding domain MUW98_05540 PF02668 Taurine catabolism dioxygenase TauD, TfdA family MUW98_05545 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase MUW98_05550 PF17969 L,D-transpeptidase C-terminal domain MUW98_05550 PF03734 L,D-transpeptidase catalytic domain MUW98_05560 PF01523 Putative modulator of DNA gyrase MUW98_05565 PF01523 Putative modulator of DNA gyrase MUW98_05570 PF00258 Flavodoxin MUW98_05575 PF02899 Phage integrase, N-terminal SAM-like domain MUW98_05575 PF00589 Phage integrase family MUW98_05580 PF00990 Diguanylate cyclase, GGDEF domain MUW98_05585 PF01741 Large-conductance mechanosensitive channel, MscL MUW98_05590 PF10411 Disulfide bond isomerase protein N-terminus MUW98_05590 PF13098 Thioredoxin-like domain MUW98_05595 PF02272 DHHA1 domain MUW98_05595 PF17768 RecJ OB domain MUW98_05595 PF01368 DHH family MUW98_05600 PF13411 MerR HTH family regulatory protein MUW98_05615 PF02508 Rnf-Nqr subunit, membrane protein MUW98_05620 PF06821 Serine hydrolase MUW98_05630 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family MUW98_05630 PF04055 Radical SAM superfamily MUW98_05635 PF03099 Biotin/lipoate A/B protein ligase family MUW98_05640 PF04359 Protein of unknown function (DUF493) MUW98_05645 PF00768 D-alanyl-D-alanine carboxypeptidase MUW98_05645 PF07943 Penicillin-binding protein 5, C-terminal domain MUW98_05650 PF03330 Lytic transglycolase MUW98_05650 PF05036 Sporulation related domain MUW98_05655 PF13406 Transglycosylase SLT domain MUW98_05660 PF01098 Cell cycle protein MUW98_05665 PF01098 Cell cycle protein MUW98_05670 PF03717 Penicillin-binding Protein dimerisation domain MUW98_05670 PF00905 Penicillin binding protein transpeptidase domain MUW98_05675 PF02590 Predicted SPOUT methyltransferase MUW98_05685 PF01467 Cytidylyltransferase-like MUW98_05700 PF08264 Anticodon-binding domain of tRNA MUW98_05700 PF00133 tRNA synthetases class I (I, L, M and V) MUW98_05700 PF13603 Leucyl-tRNA synthetase, Domain 2 MUW98_05705 PF07295 Zinc-ribbon containing domain MUW98_05710 PF00795 Carbon-nitrogen hydrolase MUW98_05715 PF00571 CBS domain MUW98_05715 PF03471 Transporter associated domain MUW98_05720 PF02130 Uncharacterized protein family UPF0054 MUW98_05725 PF02562 PhoH-like protein MUW98_05730 PF00919 Uncharacterized protein family UPF0004 MUW98_05730 PF01938 TRAM domain MUW98_05730 PF04055 Radical SAM superfamily MUW98_05735 PF01494 FAD binding domain MUW98_05740 PF00857 Isochorismatase family MUW98_05745 PF00313 'Cold-shock' DNA-binding domain MUW98_05750 PF00990 Diguanylate cyclase, GGDEF domain MUW98_05750 PF05230 MASE2 domain MUW98_05755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_05755 PF03466 LysR substrate binding domain MUW98_05765 PF13419 Haloacid dehalogenase-like hydrolase MUW98_05775 PF00990 Diguanylate cyclase, GGDEF domain MUW98_05785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MUW98_05785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MUW98_05795 PF09997 Predicted membrane protein (DUF2238) MUW98_05800 PF09285 Elongation factor P, C-terminal MUW98_05800 PF08207 Elongation factor P (EF-P) KOW-like domain MUW98_05800 PF01132 Elongation factor P (EF-P) OB domain MUW98_05810 PF00478 IMP dehydrogenase / GMP reductase domain MUW98_05820 PF08521 Two-component sensor kinase N-terminal MUW98_05820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_05820 PF00512 His Kinase A (phospho-acceptor) domain MUW98_05825 PF00486 Transcriptional regulatory protein, C terminal MUW98_05825 PF00072 Response regulator receiver domain MUW98_05845 PF00501 AMP-binding enzyme MUW98_05860 PF06224 Winged helix DNA-binding domain MUW98_05880 PF02313 Fumarate reductase subunit D MUW98_05885 PF02300 Fumarate reductase subunit C MUW98_05890 PF13085 2Fe-2S iron-sulfur cluster binding domain MUW98_05890 PF13183 4Fe-4S dicluster domain MUW98_05895 PF02910 Fumarate reductase flavoprotein C-term MUW98_05895 PF00890 FAD binding domain MUW98_05900 PF02743 Cache domain MUW98_05900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_05900 PF00672 HAMP domain MUW98_05905 PF03009 Glycerophosphoryl diester phosphodiesterase family MUW98_05910 PF00924 Mechanosensitive ion channel MUW98_05910 PF12795 Mechanosensitive ion channel porin domain MUW98_05910 PF12794 Mechanosensitive ion channel inner membrane domain 1 MUW98_05920 PF01476 LysM domain MUW98_05920 PF08525 Opacity-associated protein A N-terminal motif MUW98_05920 PF01551 Peptidase family M23 MUW98_05935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_05935 PF03466 LysR substrate binding domain MUW98_05950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_05950 PF00672 HAMP domain MUW98_05950 PF02743 Cache domain MUW98_05955 PF03466 LysR substrate binding domain MUW98_05955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_05960 PF17092 Penicillin-binding protein OB-like domain MUW98_05960 PF00912 Transglycosylase MUW98_05960 PF00905 Penicillin binding protein transpeptidase domain MUW98_05965 PF11104 Type IV pilus assembly protein PilM; MUW98_05975 PF04350 Pilus assembly protein, PilO MUW98_05985 PF11741 AMIN domain MUW98_05985 PF00263 Bacterial type II and III secretion system protein MUW98_05985 PF03958 Bacterial type II/III secretion system short domain MUW98_05985 PF07660 Secretin and TonB N terminus short domain MUW98_05990 PF01202 Shikimate kinase MUW98_05995 PF01761 3-dehydroquinate synthase MUW98_06005 PF02086 D12 class N6 adenine-specific DNA methyltransferase MUW98_06010 PF00834 Ribulose-phosphate 3 epimerase family MUW98_06015 PF13419 Haloacid dehalogenase-like hydrolase MUW98_06020 PF00579 tRNA synthetases class I (W and Y) MUW98_06030 PF00117 Glutamine amidotransferase class-I MUW98_06035 PF00202 Aminotransferase class-III MUW98_06040 PF04958 Arginine N-succinyltransferase beta subunit MUW98_06045 PF00171 Aldehyde dehydrogenase family MUW98_06055 PF13419 Haloacid dehalogenase-like hydrolase MUW98_06060 PF07690 Major Facilitator Superfamily MUW98_06065 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MUW98_06065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MUW98_06065 PF10371 Domain of unknown function MUW98_06065 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MUW98_06065 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase MUW98_06070 PF07690 Major Facilitator Superfamily MUW98_06075 PF00005 ABC transporter MUW98_06075 PF12848 ABC transporter MUW98_06085 PF00128 Alpha amylase, catalytic domain MUW98_06085 PF16657 Maltogenic Amylase, C-terminal domain MUW98_06095 PF04266 ASCH domain MUW98_06105 PF01048 Phosphorylase superfamily MUW98_06110 PF04973 Nicotinamide mononucleotide transporter MUW98_06115 PF02080 TrkA-C domain MUW98_06115 PF03600 Citrate transporter MUW98_06205 PF04829 Pre-toxin domain with VENN motif MUW98_06205 PF05860 haemagglutination activity domain MUW98_06205 PF13332 Hemagglutinin repeat MUW98_06235 PF00816 H-NS histone family MUW98_06255 PF02899 Phage integrase, N-terminal SAM-like domain MUW98_06255 PF00589 Phage integrase family MUW98_06265 PF04002 RadC-like JAB domain MUW98_06305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_06305 PF03466 LysR substrate binding domain MUW98_06320 PF00696 Amino acid kinase family MUW98_06325 PF06545 Protein of unknown function (DUF1116) MUW98_06330 PF02629 CoA binding domain MUW98_06330 PF00549 CoA-ligase MUW98_06335 PF00857 Isochorismatase family MUW98_06350 PF02264 LamB porin MUW98_06360 PF02378 Phosphotransferase system, EIIC MUW98_06365 PF00483 Nucleotidyl transferase MUW98_06370 PF13580 SIS domain MUW98_06375 PF07702 UTRA domain MUW98_06375 PF00392 Bacterial regulatory proteins, gntR family MUW98_06380 PF02056 Family 4 glycosyl hydrolase MUW98_06380 PF11975 Family 4 glycosyl hydrolase C-terminal domain MUW98_06385 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MUW98_06390 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit MUW98_06400 PF00480 ROK family MUW98_06410 PF01695 IstB-like ATP binding protein MUW98_06415 PF00665 Integrase core domain MUW98_06425 PF06071 Protein of unknown function (DUF933) MUW98_06425 PF01926 50S ribosome-binding GTPase MUW98_06430 PF01195 Peptidyl-tRNA hydrolase MUW98_06435 PF00149 Calcineurin-like phosphoesterase MUW98_06435 PF02872 5'-nucleotidase, C-terminal domain MUW98_06440 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MUW98_06440 PF14572 Phosphoribosyl synthetase-associated domain MUW98_06450 PF00288 GHMP kinases N terminal domain MUW98_06450 PF08544 GHMP kinases C terminal MUW98_06455 PF03550 Outer membrane lipoprotein LolB MUW98_06460 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MUW98_06460 PF01488 Shikimate / quinate 5-dehydrogenase MUW98_06460 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MUW98_06465 PF03462 PCRF domain MUW98_06465 PF00472 RF-1 domain MUW98_06470 PF13847 Methyltransferase domain MUW98_06470 PF17827 PrmC N-terminal domain MUW98_06480 PF13369 Transglutaminase-like superfamily MUW98_06485 PF00793 DAHP synthetase I family MUW98_06490 PF00375 Sodium:dicarboxylate symporter family MUW98_06495 PF01228 Glycine radical MUW98_06500 PF03167 Uracil DNA glycosylase superfamily MUW98_06515 PF00923 Transaldolase/Fructose-6-phosphate aldolase MUW98_06520 PF01235 Sodium:alanine symporter family MUW98_06525 PF11992 Domain of unknown function (DUF3488) MUW98_06525 PF13559 Domain of unknown function (DUF4129) MUW98_06525 PF01841 Transglutaminase-like superfamily MUW98_06535 PF17863 AAA lid domain MUW98_06535 PF07726 ATPase family associated with various cellular activities (AAA) MUW98_06540 PF00144 Beta-lactamase MUW98_06555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_06555 PF03466 LysR substrate binding domain MUW98_06565 PF00854 POT family MUW98_06570 PF03652 Holliday junction resolvase MUW98_06575 PF02622 Uncharacterized ACR, COG1678 MUW98_06580 PF12729 Four helix bundle sensory module for signal transduction MUW98_06580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_06580 PF00672 HAMP domain MUW98_06585 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain MUW98_06585 PF02951 Prokaryotic glutathione synthetase, N-terminal domain MUW98_06590 PF04452 RNA methyltransferase MUW98_06595 PF04231 Endonuclease I MUW98_06600 PF17283 SprT-like zinc ribbon domain MUW98_06600 PF10263 SprT-like family MUW98_06605 PF02773 S-adenosylmethionine synthetase, C-terminal domain MUW98_06605 PF02772 S-adenosylmethionine synthetase, central domain MUW98_06605 PF00438 S-adenosylmethionine synthetase, N-terminal domain MUW98_06610 PF02779 Transketolase, pyrimidine binding domain MUW98_06610 PF02780 Transketolase, C-terminal domain MUW98_06610 PF00456 Transketolase, thiamine diphosphate binding domain MUW98_06620 PF01042 Endoribonuclease L-PSP MUW98_06625 PF01965 DJ-1/PfpI family MUW98_06630 PF03702 Anhydro-N-acetylmuramic acid kinase MUW98_06635 PF01476 LysM domain MUW98_06635 PF08525 Opacity-associated protein A N-terminal motif MUW98_06635 PF01551 Peptidase family M23 MUW98_06640 PF00579 tRNA synthetases class I (W and Y) MUW98_06645 PF01204 Trehalase MUW98_06655 PF01161 Phosphatidylethanolamine-binding protein MUW98_06660 PF00709 Adenylosuccinate synthetase MUW98_06665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_06665 PF03466 LysR substrate binding domain MUW98_06675 PF00155 Aminotransferase class I and II MUW98_06680 PF07690 Major Facilitator Superfamily MUW98_06685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_06685 PF03466 LysR substrate binding domain MUW98_06690 PF00106 short chain dehydrogenase MUW98_06695 PF01343 Peptidase family S49 MUW98_06695 PF08496 Peptidase family S49 N-terminal MUW98_06700 PF04996 Succinylarginine dihydrolase MUW98_06705 PF01396 Topoisomerase DNA binding C4 zinc finger MUW98_06705 PF01751 Toprim domain MUW98_06705 PF01131 DNA topoisomerase MUW98_06705 PF08272 Topoisomerase I zinc-ribbon-like MUW98_06720 PF08447 PAS fold MUW98_06720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_06725 PF02838 Glycosyl hydrolase family 20, domain 2 MUW98_06725 PF00728 Glycosyl hydrolase family 20, catalytic domain MUW98_06730 PF01869 BadF/BadG/BcrA/BcrD ATPase family MUW98_06740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MUW98_06740 PF00005 ABC transporter MUW98_06745 PF00005 ABC transporter MUW98_06745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MUW98_06750 PF12911 N-terminal TM domain of oligopeptide transport permease C MUW98_06750 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_06755 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_06760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MUW98_06765 PF09308 LuxQ, periplasmic MUW98_06765 PF00072 Response regulator receiver domain MUW98_06765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_06765 PF00512 His Kinase A (phospho-acceptor) domain MUW98_06785 PF10725 Protein of unknown function (DUF2517) MUW98_06795 PF05114 Protein of unknown function (DUF692) MUW98_06815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_06815 PF08447 PAS fold MUW98_06815 PF13426 PAS domain MUW98_06830 PF04632 Fusaric acid resistance protein family MUW98_06835 PF03453 MoeA N-terminal region (domain I and II) MUW98_06835 PF03454 MoeA C-terminal region (domain IV) MUW98_06835 PF00994 Probable molybdopterin binding domain MUW98_06840 PF12804 MobA-like NTP transferase domain MUW98_06845 PF00005 ABC transporter MUW98_06850 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_06855 PF12849 PBP superfamily domain MUW98_06860 PF02954 Bacterial regulatory protein, Fis family MUW98_06860 PF00072 Response regulator receiver domain MUW98_06860 PF00158 Sigma-54 interaction domain MUW98_06865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_06865 PF00512 His Kinase A (phospho-acceptor) domain MUW98_06865 PF00989 PAS fold MUW98_06870 PF12728 Helix-turn-helix domain MUW98_06870 PF12727 PBP superfamily domain MUW98_06875 PF02634 FdhD/NarQ family MUW98_06910 PF12838 4Fe-4S dicluster domain MUW98_06910 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MUW98_06910 PF00384 Molybdopterin oxidoreductase MUW98_06910 PF01568 Molydopterin dinucleotide binding domain MUW98_06910 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MUW98_06910 PF12838 4Fe-4S dicluster domain MUW98_06910 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MUW98_06910 PF00384 Molybdopterin oxidoreductase MUW98_06910 PF01568 Molydopterin dinucleotide binding domain MUW98_06910 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MUW98_06915 PF13247 4Fe-4S dicluster domain MUW98_06925 PF00072 Response regulator receiver domain MUW98_06930 PF00390 Malic enzyme, N-terminal domain MUW98_06930 PF03949 Malic enzyme, NAD binding domain MUW98_06935 PF05433 Glycine zipper 2TM domain MUW98_06935 PF16998 17 kDa outer membrane surface antigen MUW98_06945 PF00860 Permease family MUW98_06950 PF10282 Lactonase, 7-bladed beta-propeller MUW98_06960 PF02661 Fic/DOC family MUW98_06960 PF13784 Fic/DOC family N-terminal MUW98_06985 PF18818 Metallopeptidase superfamily domain MUW98_06985 PF08401 Domain of unknown function (DUF1738) MUW98_06985 PF13362 Toprim domain MUW98_07025 PF12794 Mechanosensitive ion channel inner membrane domain 1 MUW98_07025 PF12795 Mechanosensitive ion channel porin domain MUW98_07025 PF00924 Mechanosensitive ion channel MUW98_07030 PF00224 Pyruvate kinase, barrel domain MUW98_07030 PF02887 Pyruvate kinase, alpha/beta domain MUW98_07040 PF04389 Peptidase family M28 MUW98_07040 PF04151 Bacterial pre-peptidase C-terminal domain MUW98_07045 PF02254 TrkA-N domain MUW98_07045 PF00999 Sodium/hydrogen exchanger family MUW98_07055 PF04381 Putative exonuclease, RdgC MUW98_07065 PF00149 Calcineurin-like phosphoesterase MUW98_07065 PF12320 Type 5 capsule protein repressor C-terminal domain MUW98_07070 PF13476 AAA domain MUW98_07080 PF01292 Prokaryotic cytochrome b561 MUW98_07090 PF00990 Diguanylate cyclase, GGDEF domain MUW98_07090 PF00072 Response regulator receiver domain MUW98_07095 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MUW98_07100 PF05524 PEP-utilising enzyme, N-terminal MUW98_07100 PF00391 PEP-utilising enzyme, mobile domain MUW98_07100 PF02896 PEP-utilising enzyme, TIM barrel domain MUW98_07105 PF00381 PTS HPr component phosphorylation site MUW98_07110 PF00291 Pyridoxal-phosphate dependent enzyme MUW98_07115 PF17871 AAA lid domain MUW98_07115 PF07724 AAA domain (Cdc48 subfamily) MUW98_07115 PF02861 Clp amino terminal domain, pathogenicity island component MUW98_07115 PF00004 ATPase family associated with various cellular activities (AAA) MUW98_07115 PF10431 C-terminal, D2-small domain, of ClpB protein MUW98_07125 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MUW98_07125 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MUW98_07130 PF01980 tRNA-methyltransferase O MUW98_07130 PF18389 TrmO C-terminal domain MUW98_07150 PF00664 ABC transporter transmembrane region MUW98_07150 PF00005 ABC transporter MUW98_07155 PF00664 ABC transporter transmembrane region MUW98_07155 PF00005 ABC transporter MUW98_07170 PF00072 Response regulator receiver domain MUW98_07170 PF00486 Transcriptional regulatory protein, C terminal MUW98_07180 PF03737 Aldolase/RraA MUW98_07195 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) MUW98_07200 PF00588 SpoU rRNA Methylase family MUW98_07205 PF00696 Amino acid kinase family MUW98_07205 PF13840 ACT domain MUW98_07205 PF01842 ACT domain MUW98_07205 PF00742 Homoserine dehydrogenase MUW98_07205 PF03447 Homoserine dehydrogenase, NAD binding domain MUW98_07210 PF08544 GHMP kinases C terminal MUW98_07210 PF00288 GHMP kinases N terminal domain MUW98_07215 PF00291 Pyridoxal-phosphate dependent enzyme MUW98_07215 PF14821 Threonine synthase N terminus MUW98_07225 PF00005 ABC transporter MUW98_07225 PF12848 ABC transporter MUW98_07250 PF01048 Phosphorylase superfamily MUW98_07265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_07265 PF00512 His Kinase A (phospho-acceptor) domain MUW98_07265 PF01627 Hpt domain MUW98_07265 PF00989 PAS fold MUW98_07265 PF00072 Response regulator receiver domain MUW98_07265 PF00497 Bacterial extracellular solute-binding proteins, family 3 MUW98_07270 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase MUW98_07275 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MUW98_07275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MUW98_07280 PF02690 Na+/Pi-cotransporter MUW98_07290 PF13520 Amino acid permease MUW98_07295 PF00324 Amino acid permease MUW98_07300 PF00202 Aminotransferase class-III MUW98_07305 PF00171 Aldehyde dehydrogenase family MUW98_07310 PF07883 Cupin domain MUW98_07310 PF01381 Helix-turn-helix MUW98_07315 PF01266 FAD dependent oxidoreductase MUW98_07330 PF00816 H-NS histone family MUW98_07335 PF00793 DAHP synthetase I family MUW98_07340 PF08021 Siderophore-interacting FAD-binding domain MUW98_07340 PF04954 Siderophore-interacting protein MUW98_07345 PF02321 Outer membrane efflux protein MUW98_07350 PF00005 ABC transporter MUW98_07350 PF02687 FtsX-like permease family MUW98_07350 PF12704 MacB-like periplasmic core domain MUW98_07355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MUW98_07365 PF01368 DHH family MUW98_07365 PF02833 DHHA2 domain MUW98_07370 PF02463 RecF/RecN/SMC N terminal domain MUW98_07375 PF01513 ATP-NAD kinase MUW98_07380 PF01025 GrpE MUW98_07385 PF00012 Hsp70 protein MUW98_07390 PF00226 DnaJ domain MUW98_07390 PF00684 DnaJ central domain MUW98_07390 PF01556 DnaJ C terminal domain MUW98_07395 PF11471 Maltoporin periplasmic N-terminal extension MUW98_07395 PF02264 LamB porin MUW98_07400 PF00294 pfkB family carbohydrate kinase MUW98_07405 PF00367 phosphotransferase system, EIIB MUW98_07405 PF02378 Phosphotransferase system, EIIC MUW98_07410 PF08244 Glycosyl hydrolases family 32 C terminal MUW98_07410 PF00251 Glycosyl hydrolases family 32 N-terminal domain MUW98_07415 PF00356 Bacterial regulatory proteins, lacI family MUW98_07415 PF13407 Periplasmic binding protein domain MUW98_07420 PF02308 MgtC family MUW98_07435 PF01022 Bacterial regulatory protein, arsR family MUW98_07440 PF04143 Sulphur transport MUW98_07455 PF00873 AcrB/AcrD/AcrF family MUW98_07460 PF00563 EAL domain MUW98_07460 PF00990 Diguanylate cyclase, GGDEF domain MUW98_07460 PF03707 Bacterial signalling protein N terminal repeat MUW98_07465 PF10437 Bacterial lipoate protein ligase C-terminus MUW98_07465 PF03099 Biotin/lipoate A/B protein ligase family MUW98_07485 PF00873 AcrB/AcrD/AcrF family MUW98_07490 PF00529 HlyD membrane-fusion protein of T1SS MUW98_07490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MUW98_07500 PF00873 AcrB/AcrD/AcrF family MUW98_07505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MUW98_07510 PF03372 Endonuclease/Exonuclease/phosphatase family MUW98_07525 PF07690 Major Facilitator Superfamily MUW98_07530 PF02424 ApbE family MUW98_07535 PF00127 Copper binding proteins, plastocyanin/azurin family MUW98_07550 PF01156 Inosine-uridine preferring nucleoside hydrolase MUW98_07560 PF00034 Cytochrome c MUW98_07560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MUW98_07570 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MUW98_07570 PF06481 COX Aromatic Rich Motif MUW98_07575 PF00115 Cytochrome C and Quinol oxidase polypeptide I MUW98_07580 PF00510 Cytochrome c oxidase subunit III MUW98_07585 PF03626 Prokaryotic Cytochrome C oxidase subunit IV MUW98_07590 PF01040 UbiA prenyltransferase family MUW98_07595 PF07690 Major Facilitator Superfamily MUW98_07605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_07605 PF00512 His Kinase A (phospho-acceptor) domain MUW98_07605 PF01627 Hpt domain MUW98_07605 PF00072 Response regulator receiver domain MUW98_07605 PF00672 HAMP domain MUW98_07610 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MUW98_07620 PF00072 Response regulator receiver domain MUW98_07620 PF00486 Transcriptional regulatory protein, C terminal MUW98_07625 PF03264 NapC/NirT cytochrome c family, N-terminal region MUW98_07630 PF18364 Molybdopterin oxidoreductase N-terminal domain MUW98_07630 PF01568 Molydopterin dinucleotide binding domain MUW98_07630 PF00384 Molybdopterin oxidoreductase MUW98_07635 PF02613 Nitrate reductase delta subunit MUW98_07675 PF04002 RadC-like JAB domain MUW98_07725 PF05930 Prophage CP4-57 regulatory protein (AlpA) MUW98_07745 PF07670 Nucleoside recognition MUW98_07745 PF07662 Na+ dependent nucleoside transporter C-terminus MUW98_07745 PF01773 Na+ dependent nucleoside transporter N-terminus MUW98_07815 PF00290 Tryptophan synthase alpha chain MUW98_07820 PF00291 Pyridoxal-phosphate dependent enzyme MUW98_07825 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MUW98_07825 PF00218 Indole-3-glycerol phosphate synthase MUW98_07830 PF02885 Glycosyl transferase family, helical bundle domain MUW98_07830 PF00591 Glycosyl transferase family, a/b domain MUW98_07835 PF00117 Glutamine amidotransferase class-I MUW98_07835 PF02885 Glycosyl transferase family, helical bundle domain MUW98_07835 PF00591 Glycosyl transferase family, a/b domain MUW98_07840 PF04715 Anthranilate synthase component I, N terminal region MUW98_07840 PF00425 chorismate binding enzyme MUW98_07845 PF02811 PHP domain MUW98_07850 PF01300 Telomere recombination MUW98_07855 PF02616 Segregation and condensation protein ScpA MUW98_07860 PF04079 Segregation and condensation complex subunit ScpB MUW98_07865 PF01479 S4 domain MUW98_07865 PF00849 RNA pseudouridylate synthase MUW98_07885 PF00440 Bacterial regulatory proteins, tetR family MUW98_07885 PF08361 MAATS-type transcriptional repressor, C-terminal region MUW98_07890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MUW98_07890 PF00529 HlyD membrane-fusion protein of T1SS MUW98_07895 PF00873 AcrB/AcrD/AcrF family MUW98_07905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MUW98_07905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MUW98_07905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MUW98_07910 PF01370 NAD dependent epimerase/dehydratase family MUW98_07940 PF00117 Glutamine amidotransferase class-I MUW98_07945 PF00977 Histidine biosynthesis protein MUW98_07950 PF08485 Polysaccharide biosynthesis protein C-terminal MUW98_07950 PF02719 Polysaccharide biosynthesis protein MUW98_07955 PF01370 NAD dependent epimerase/dehydratase family MUW98_07960 PF02350 UDP-N-acetylglucosamine 2-epimerase MUW98_07970 PF01370 NAD dependent epimerase/dehydratase family MUW98_07975 PF02397 Bacterial sugar transferase MUW98_07980 PF02719 Polysaccharide biosynthesis protein MUW98_07985 PF16363 GDP-mannose 4,6 dehydratase MUW98_07990 PF04321 RmlD substrate binding domain MUW98_07995 PF00483 Nucleotidyl transferase MUW98_08000 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase MUW98_08005 PF02706 Chain length determinant protein MUW98_08015 PF04337 Protein of unknown function, DUF480 MUW98_08020 PF00271 Helicase conserved C-terminal domain MUW98_08020 PF04434 SWIM zinc finger MUW98_08020 PF00176 SNF2 family N-terminal domain MUW98_08025 PF05472 DNA replication terminus site-binding protein (Ter protein) MUW98_08035 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family MUW98_08040 PF00676 Dehydrogenase E1 component MUW98_08045 PF02779 Transketolase, pyrimidine binding domain MUW98_08045 PF02780 Transketolase, C-terminal domain MUW98_08050 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MUW98_08050 PF00364 Biotin-requiring enzyme MUW98_08050 PF02817 e3 binding domain MUW98_08055 PF00313 'Cold-shock' DNA-binding domain MUW98_08080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MUW98_08085 PF00892 EamA-like transporter family MUW98_08090 PF00455 DeoR C terminal sensor domain MUW98_08090 PF08220 DeoR-like helix-turn-helix domain MUW98_08095 PF02901 Pyruvate formate lyase-like MUW98_08095 PF01228 Glycine radical MUW98_08100 PF04055 Radical SAM superfamily MUW98_08105 PF00923 Transaldolase/Fructose-6-phosphate aldolase MUW98_08115 PF01966 HD domain MUW98_08115 PF11871 Domain of unknown function (DUF3391) MUW98_08120 PF00849 RNA pseudouridylate synthase MUW98_08120 PF01479 S4 domain MUW98_08130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MUW98_08135 PF12850 Calcineurin-like phosphoesterase superfamily domain MUW98_08150 PF13144 Chaperone for flagella basal body P-ring formation MUW98_08155 PF01584 CheW-like domain MUW98_08155 PF00072 Response regulator receiver domain MUW98_08160 PF03705 CheR methyltransferase, all-alpha domain MUW98_08160 PF01739 CheR methyltransferase, SAM binding domain MUW98_08165 PF00460 Flagella basal body rod protein MUW98_08170 PF00460 Flagella basal body rod protein MUW98_08170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MUW98_08180 PF00460 Flagella basal body rod protein MUW98_08180 PF07559 Flagellar basal body protein FlaE MUW98_08180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MUW98_08185 PF00460 Flagella basal body rod protein MUW98_08185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MUW98_08190 PF00460 Flagella basal body rod protein MUW98_08190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MUW98_08195 PF02107 Flagellar L-ring protein MUW98_08200 PF02119 Flagellar P-ring protein MUW98_08205 PF10135 Rod binding protein MUW98_08205 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MUW98_08210 PF00460 Flagella basal body rod protein MUW98_08210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MUW98_08215 PF00669 Bacterial flagellin N-terminal helical region MUW98_08220 PF00571 CBS domain MUW98_08220 PF01769 Divalent cation transporter MUW98_08220 PF03448 MgtE intracellular N domain MUW98_08225 PF02541 Ppx/GppA phosphatase family MUW98_08230 PF13090 Polyphosphate kinase C-terminal domain 2 MUW98_08230 PF17941 Polyphosphate kinase C-terminal domain 1 MUW98_08230 PF13089 Polyphosphate kinase N-terminal domain MUW98_08230 PF02503 Polyphosphate kinase middle domain MUW98_08235 PF01842 ACT domain MUW98_08245 PF00158 Sigma-54 interaction domain MUW98_08245 PF02954 Bacterial regulatory protein, Fis family MUW98_08245 PF06490 Flagellar regulatory protein FleQ MUW98_08250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_08250 PF00512 His Kinase A (phospho-acceptor) domain MUW98_08250 PF13188 PAS domain MUW98_08255 PF02954 Bacterial regulatory protein, Fis family MUW98_08255 PF00072 Response regulator receiver domain MUW98_08255 PF00158 Sigma-54 interaction domain MUW98_08260 PF01784 NIF3 (NGG1p interacting factor 3) MUW98_08265 PF00551 Formyl transferase MUW98_08270 PF00586 AIR synthase related protein, N-terminal domain MUW98_08270 PF02769 AIR synthase related protein, C-terminal domain MUW98_08285 PF00308 Bacterial dnaA protein MUW98_08290 PF00463 Isocitrate lyase family MUW98_08295 PF01274 Malate synthase MUW98_08310 PF14437 MafB19-like deaminase MUW98_08315 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_08320 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_08325 PF00005 ABC transporter MUW98_08330 PF01895 PhoU domain MUW98_08335 PF03471 Transporter associated domain MUW98_08335 PF01595 Cyclin M transmembrane N-terminal domain MUW98_08335 PF00571 CBS domain MUW98_08345 PF00809 Pterin binding enzyme MUW98_08345 PF02310 B12 binding domain MUW98_08345 PF02607 B12 binding domain MUW98_08345 PF02574 Homocysteine S-methyltransferase MUW98_08345 PF02965 Vitamin B12 dependent methionine synthase, activation domain MUW98_08350 PF13520 Amino acid permease MUW98_08355 PF04116 Fatty acid hydroxylase superfamily MUW98_08370 PF00005 ABC transporter MUW98_08375 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_08380 PF00497 Bacterial extracellular solute-binding proteins, family 3 MUW98_08385 PF00990 Diguanylate cyclase, GGDEF domain MUW98_08390 PF07690 Major Facilitator Superfamily MUW98_08395 PF05231 MASE1 MUW98_08395 PF07730 Histidine kinase MUW98_08395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_08400 PF00072 Response regulator receiver domain MUW98_08400 PF00196 Bacterial regulatory proteins, luxR family MUW98_08405 PF01272 Transcription elongation factor, GreA/GreB, C-term MUW98_08405 PF14760 Rnk N-terminus MUW98_08420 PF00245 Alkaline phosphatase MUW98_08425 PF00245 Alkaline phosphatase MUW98_08430 PF01926 50S ribosome-binding GTPase MUW98_08435 PF07690 Major Facilitator Superfamily MUW98_08440 PF00850 Histone deacetylase domain MUW98_08450 PF13307 Helicase C-terminal domain MUW98_08450 PF06733 DEAD_2 MUW98_08460 PF00872 Transposase, Mutator family MUW98_08470 PF00155 Aminotransferase class I and II MUW98_08475 PF05872 Bacterial protein of unknown function (DUF853) MUW98_08490 PF03772 Competence protein MUW98_08490 PF00753 Metallo-beta-lactamase superfamily MUW98_08495 PF00005 ABC transporter MUW98_08495 PF00664 ABC transporter transmembrane region MUW98_08500 PF02606 Tetraacyldisaccharide-1-P 4'-kinase MUW98_08505 PF03966 Trm112p-like protein MUW98_08510 PF02348 Cytidylyltransferase MUW98_08515 PF00072 Response regulator receiver domain MUW98_08515 PF00196 Bacterial regulatory proteins, luxR family MUW98_08520 PF01541 GIY-YIG catalytic domain MUW98_08520 PF08459 UvrC Helix-hairpin-helix N-terminal MUW98_08520 PF02151 UvrB/uvrC motif MUW98_08525 PF01066 CDP-alcohol phosphatidyltransferase MUW98_08545 PF13426 PAS domain MUW98_08545 PF08447 PAS fold MUW98_08545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_08550 PF00672 HAMP domain MUW98_08550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_08555 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB MUW98_08560 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) MUW98_08580 PF00037 4Fe-4S binding domain MUW98_08580 PF13247 4Fe-4S dicluster domain MUW98_08585 PF03916 Polysulphide reductase, NrfD MUW98_08590 PF00149 Calcineurin-like phosphoesterase MUW98_08600 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MUW98_08605 PF01406 tRNA synthetases class I (C) catalytic domain MUW98_08605 PF09190 DALR domain MUW98_08625 PF13185 GAF domain MUW98_08625 PF00990 Diguanylate cyclase, GGDEF domain MUW98_08655 PF01169 Uncharacterized protein family UPF0016 MUW98_08660 PF01253 Translation initiation factor SUI1 MUW98_08670 PF07664 Ferrous iron transport protein B C terminus MUW98_08670 PF02421 Ferrous iron transport protein B MUW98_08670 PF07670 Nucleoside recognition MUW98_08685 PF00483 Nucleotidyl transferase MUW98_08690 PF00437 Type II/IV secretion system protein MUW98_08700 PF00497 Bacterial extracellular solute-binding proteins, family 3 MUW98_08700 PF00072 Response regulator receiver domain MUW98_08700 PF00989 PAS fold MUW98_08700 PF01627 Hpt domain MUW98_08700 PF00512 His Kinase A (phospho-acceptor) domain MUW98_08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_08705 PF01032 FecCD transport family MUW98_08710 PF00005 ABC transporter MUW98_08715 PF00583 Acetyltransferase (GNAT) family MUW98_08720 PF00793 DAHP synthetase I family MUW98_08725 PF01219 Prokaryotic diacylglycerol kinase MUW98_08730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MUW98_08730 PF01842 ACT domain MUW98_08730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MUW98_08735 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MUW98_08740 PF01812 5-formyltetrahydrofolate cyclo-ligase family MUW98_08750 PF01113 Dihydrodipicolinate reductase, N-terminus MUW98_08750 PF05173 Dihydrodipicolinate reductase, C-terminus MUW98_08755 PF00117 Glutamine amidotransferase class-I MUW98_08755 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MUW98_08760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MUW98_08760 PF02142 MGS-like domain MUW98_08760 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MUW98_08765 PF00682 HMGL-like MUW98_08765 PF08502 LeuA allosteric (dimerisation) domain MUW98_08770 PF07759 Protein of unknown function (DUF1615) MUW98_08780 PF08378 Nuclease-related domain MUW98_08800 PF13302 Acetyltransferase (GNAT) domain MUW98_08805 PF00271 Helicase conserved C-terminal domain MUW98_08805 PF00270 DEAD/DEAH box helicase MUW98_08815 PF14521 Lysine-specific metallo-endopeptidase MUW98_08830 PF00376 MerR family regulatory protein MUW98_08830 PF09278 MerR, DNA binding MUW98_08845 PF00497 Bacterial extracellular solute-binding proteins, family 3 MUW98_08850 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_08855 PF00005 ABC transporter MUW98_08860 PF07992 Pyridine nucleotide-disulphide oxidoreductase MUW98_08860 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MUW98_08865 PF01493 GXGXG motif MUW98_08865 PF01645 Conserved region in glutamate synthase MUW98_08865 PF04898 Glutamate synthase central domain MUW98_08865 PF00310 Glutamine amidotransferases class-II MUW98_08870 PF04055 Radical SAM superfamily MUW98_08870 PF16199 Radical_SAM C-terminal domain MUW98_08875 PF00664 ABC transporter transmembrane region MUW98_08875 PF00005 ABC transporter MUW98_08875 PF03412 Peptidase C39 family MUW98_08925 PF00324 Amino acid permease MUW98_08935 PF03618 Kinase/pyrophosphorylase MUW98_08940 PF00391 PEP-utilising enzyme, mobile domain MUW98_08940 PF02896 PEP-utilising enzyme, TIM barrel domain MUW98_08940 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MUW98_08950 PF14310 Fibronectin type III-like domain MUW98_08950 PF00933 Glycosyl hydrolase family 3 N terminal domain MUW98_08950 PF01915 Glycosyl hydrolase family 3 C-terminal domain MUW98_08960 PF01483 Proprotein convertase P-domain MUW98_08960 PF00082 Subtilase family MUW98_08970 PF03180 NLPA lipoprotein MUW98_08975 PF01569 PAP2 superfamily MUW98_08980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MUW98_08980 PF11890 Domain of unknown function (DUF3410) MUW98_08980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MUW98_08985 PF02774 Semialdehyde dehydrogenase, dimerisation domain MUW98_08985 PF01118 Semialdehyde dehydrogenase, NAD binding domain MUW98_08995 PF01416 tRNA pseudouridine synthase MUW98_09000 PF01039 Carboxyl transferase domain MUW98_09000 PF17848 Acetyl-coA carboxylase zinc finger domain MUW98_09005 PF02875 Mur ligase family, glutamate ligase domain MUW98_09005 PF08245 Mur ligase middle domain MUW98_09010 PF05036 Sporulation related domain MUW98_09015 PF04358 DsrC like protein MUW98_09020 PF12805 FUSC-like inner membrane protein yccS MUW98_09025 PF01027 Inhibitor of apoptosis-promoting Bax1 MUW98_09045 PF00884 Sulfatase MUW98_09045 PF08019 Phosphoethanolamine transferase EptA/EptB MUW98_09050 PF09924 Uncharacterised conserved protein (DUF2156) MUW98_09050 PF03706 Lysylphosphatidylglycerol synthase TM region MUW98_09060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_09060 PF08447 PAS fold MUW98_09065 PF00990 Diguanylate cyclase, GGDEF domain MUW98_09065 PF13185 GAF domain MUW98_09070 PF00849 RNA pseudouridylate synthase MUW98_09080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MUW98_09085 PF04209 homogentisate 1,2-dioxygenase MUW98_09095 PF14497 Glutathione S-transferase, C-terminal domain MUW98_09095 PF02798 Glutathione S-transferase, N-terminal domain MUW98_09110 PF00733 Asparagine synthase MUW98_09110 PF13537 Glutamine amidotransferase domain MUW98_09120 PF00999 Sodium/hydrogen exchanger family MUW98_09120 PF02254 TrkA-N domain MUW98_09125 PF13344 Haloacid dehalogenase-like hydrolase MUW98_09130 PF00962 Adenosine/AMP deaminase MUW98_09135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MUW98_09140 PF03471 Transporter associated domain MUW98_09140 PF03741 Integral membrane protein TerC family MUW98_09150 PF02913 FAD linked oxidases, C-terminal domain MUW98_09150 PF01565 FAD binding domain MUW98_09150 PF13183 4Fe-4S dicluster domain MUW98_09160 PF03061 Thioesterase superfamily MUW98_09165 PF03880 DbpA RNA binding domain MUW98_09165 PF00270 DEAD/DEAH box helicase MUW98_09165 PF00271 Helicase conserved C-terminal domain MUW98_09170 PF13726 Na+-H+ antiporter family MUW98_09170 PF03553 Na+/H+ antiporter family MUW98_09175 PF00929 Exonuclease MUW98_09180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_09180 PF00672 HAMP domain MUW98_09180 PF12729 Four helix bundle sensory module for signal transduction MUW98_09185 PF18393 MotY N-terminal domain MUW98_09185 PF00691 OmpA family MUW98_09190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MUW98_09195 PF10576 Iron-sulfur binding domain of endonuclease III MUW98_09195 PF00633 Helix-hairpin-helix motif MUW98_09195 PF00730 HhH-GPD superfamily base excision DNA repair protein MUW98_09200 PF02508 Rnf-Nqr subunit, membrane protein MUW98_09205 PF04205 FMN-binding domain MUW98_09210 PF03116 NQR2, RnfD, RnfE family MUW98_09215 PF10531 SLBB domain MUW98_09215 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MUW98_09215 PF12838 4Fe-4S dicluster domain MUW98_09215 PF13375 RnfC Barrel sandwich hybrid domain MUW98_09220 PF04060 Putative Fe-S cluster MUW98_09225 PF02508 Rnf-Nqr subunit, membrane protein MUW98_09230 PF00892 EamA-like transporter family MUW98_09250 PF12241 Trans-2-enoyl-CoA reductase catalytic region MUW98_09250 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase MUW98_09250 PF07055 Enoyl reductase FAD binding domain MUW98_09255 PF03606 C4-dicarboxylate anaerobic carrier MUW98_09260 PF00155 Aminotransferase class I and II MUW98_09270 PF00462 Glutaredoxin MUW98_09275 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family MUW98_09280 PF00271 Helicase conserved C-terminal domain MUW98_09280 PF04851 Type III restriction enzyme, res subunit MUW98_09285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MUW98_09285 PF00529 HlyD membrane-fusion protein of T1SS MUW98_09290 PF11742 Protein of unknown function (DUF3302) MUW98_09295 PF02554 Carbon starvation protein CstA MUW98_09300 PF04397 LytTr DNA-binding domain MUW98_09300 PF00072 Response regulator receiver domain MUW98_09305 PF07694 5TMR of 5TMR-LYT MUW98_09305 PF06580 Histidine kinase MUW98_09310 PF01966 HD domain MUW98_09315 PF00171 Aldehyde dehydrogenase family MUW98_09315 PF00465 Iron-containing alcohol dehydrogenase MUW98_09325 PF01914 MarC family integral membrane protein MUW98_09330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MUW98_09335 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_09340 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_09340 PF12911 N-terminal TM domain of oligopeptide transport permease C MUW98_09345 PF00005 ABC transporter MUW98_09345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MUW98_09350 PF00005 ABC transporter MUW98_09350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MUW98_09355 PF03741 Integral membrane protein TerC family MUW98_09360 PF00842 Alanine racemase, C-terminal domain MUW98_09360 PF01168 Alanine racemase, N-terminal domain MUW98_09370 PF00375 Sodium:dicarboxylate symporter family MUW98_09385 PF01979 Amidohydrolase family MUW98_09395 PF00672 HAMP domain MUW98_09395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_09400 PF01230 HIT domain MUW98_09435 PF07549 SecD/SecF GG Motif MUW98_09435 PF13721 SecD export protein N-terminal TM region MUW98_09435 PF02355 Protein export membrane protein MUW98_09440 PF07549 SecD/SecF GG Motif MUW98_09440 PF02355 Protein export membrane protein MUW98_09475 PF05661 Protein of unknown function (DUF808) MUW98_09480 PF01432 Peptidase family M3 MUW98_09480 PF08439 Oligopeptidase F MUW98_09485 PF08439 Oligopeptidase F MUW98_09485 PF01432 Peptidase family M3 MUW98_09490 PF00860 Permease family MUW98_09495 PF05728 Uncharacterised protein family (UPF0227) MUW98_09500 PF07992 Pyridine nucleotide-disulphide oxidoreductase MUW98_09520 PF01906 Putative heavy-metal-binding MUW98_09535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MUW98_09535 PF10414 Sirohaem synthase dimerisation region MUW98_09535 PF14824 Sirohaem biosynthesis protein central MUW98_09540 PF13187 4Fe-4S dicluster domain MUW98_09540 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MUW98_09540 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MUW98_09545 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B MUW98_09545 PF00175 Oxidoreductase NAD-binding domain MUW98_09550 PF17179 4Fe-4S dicluster domain MUW98_09555 PF01734 Patatin-like phospholipase MUW98_09560 PF17676 LD-carboxypeptidase C-terminal domain MUW98_09560 PF02016 LD-carboxypeptidase N-terminal domain MUW98_09565 PF00884 Sulfatase MUW98_09575 PF00696 Amino acid kinase family MUW98_09575 PF01842 ACT domain MUW98_09580 PF00696 Amino acid kinase family MUW98_09580 PF00583 Acetyltransferase (GNAT) family MUW98_09585 PF01625 Peptide methionine sulfoxide reductase MUW98_09605 PF00561 alpha/beta hydrolase fold MUW98_09610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MUW98_09620 PF03466 LysR substrate binding domain MUW98_09620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_09625 PF02652 L-lactate permease MUW98_09630 PF02754 Cysteine-rich domain MUW98_09635 PF02589 LUD domain MUW98_09635 PF13183 4Fe-4S dicluster domain MUW98_09635 PF11870 Domain of unknown function (DUF3390) MUW98_09640 PF02589 LUD domain MUW98_09645 PF02913 FAD linked oxidases, C-terminal domain MUW98_09645 PF01565 FAD binding domain MUW98_09660 PF00665 Integrase core domain MUW98_09665 PF01695 IstB-like ATP binding protein MUW98_09695 PF02687 FtsX-like permease family MUW98_09695 PF12704 MacB-like periplasmic core domain MUW98_09700 PF00005 ABC transporter MUW98_09710 PF07690 Major Facilitator Superfamily MUW98_09725 PF01593 Flavin containing amine oxidoreductase MUW98_09730 PF03239 Iron permease FTR1 family MUW98_09745 PF03350 Uncharacterized protein family, UPF0114 MUW98_09760 PF01740 STAS domain MUW98_09760 PF00916 Sulfate permease family MUW98_09780 PF00842 Alanine racemase, C-terminal domain MUW98_09780 PF01168 Alanine racemase, N-terminal domain MUW98_09785 PF12729 Four helix bundle sensory module for signal transduction MUW98_09785 PF00672 HAMP domain MUW98_09785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_09790 PF00563 EAL domain MUW98_09790 PF00990 Diguanylate cyclase, GGDEF domain MUW98_09790 PF03707 Bacterial signalling protein N terminal repeat MUW98_09795 PF00072 Response regulator receiver domain MUW98_09795 PF01339 CheB methylesterase MUW98_09800 PF03705 CheR methyltransferase, all-alpha domain MUW98_09800 PF01739 CheR methyltransferase, SAM binding domain MUW98_09805 PF01584 CheW-like domain MUW98_09810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_09810 PF17202 Single cache domain 3 MUW98_09810 PF00672 HAMP domain MUW98_09815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_09815 PF01627 Hpt domain MUW98_09815 PF02895 Signal transducing histidine kinase, homodimeric domain MUW98_09815 PF09078 CheY binding MUW98_09815 PF01584 CheW-like domain MUW98_09825 PF00072 Response regulator receiver domain MUW98_09830 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal MUW98_09830 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MUW98_09835 PF13247 4Fe-4S dicluster domain MUW98_09840 PF03916 Polysulphide reductase, NrfD MUW98_09845 PF00374 Nickel-dependent hydrogenase MUW98_09850 PF01750 Hydrogenase maturation protease MUW98_09855 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE MUW98_09860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MUW98_09865 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_09870 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_09870 PF12911 N-terminal TM domain of oligopeptide transport permease C MUW98_09875 PF00005 ABC transporter MUW98_09880 PF00005 ABC transporter MUW98_09885 PF02492 CobW/HypB/UreG, nucleotide-binding domain MUW98_09895 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA MUW98_09900 PF00586 AIR synthase related protein, N-terminal domain MUW98_09900 PF02769 AIR synthase related protein, C-terminal domain MUW98_09905 PF01924 Hydrogenase formation hypA family MUW98_09910 PF01455 HupF/HypC family MUW98_09915 PF00708 Acylphosphatase MUW98_09915 PF01300 Telomere recombination MUW98_09915 PF07503 HypF finger MUW98_09915 PF17788 HypF Kae1-like domain MUW98_09920 PF00009 Elongation factor Tu GTP binding domain MUW98_09920 PF03144 Elongation factor Tu domain 2 MUW98_09920 PF09105 Elongation factor SelB, winged helix MUW98_09920 PF09106 Elongation factor SelB, winged helix MUW98_09920 PF09107 Elongation factor SelB, winged helix MUW98_09925 PF03841 L-seryl-tRNA selenium transferase MUW98_09925 PF12390 Selenocysteine synthase N terminal MUW98_09935 PF01750 Hydrogenase maturation protease MUW98_09940 PF07450 Formate hydrogenlyase maturation protein HycH MUW98_09945 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MUW98_09950 PF12838 4Fe-4S dicluster domain MUW98_09955 PF00374 Nickel-dependent hydrogenase MUW98_09955 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MUW98_09955 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MUW98_09960 PF00146 NADH dehydrogenase MUW98_09965 PF00361 Proton-conducting membrane transporter MUW98_09970 PF00037 4Fe-4S binding domain MUW98_09970 PF12798 4Fe-4S binding domain MUW98_09975 PF02705 K+ potassium transporter MUW98_09990 PF13247 4Fe-4S dicluster domain MUW98_09990 PF12800 4Fe-4S binding domain MUW98_10005 PF01609 Transposase DDE domain MUW98_10005 PF05598 Transposase domain (DUF772) MUW98_10010 PF00158 Sigma-54 interaction domain MUW98_10010 PF02954 Bacterial regulatory protein, Fis family MUW98_10010 PF01590 GAF domain MUW98_10015 PF02634 FdhD/NarQ family MUW98_10020 PF13662 Toprim domain MUW98_10020 PF02132 RecR protein MUW98_10025 PF00183 Hsp90 protein MUW98_10025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_10030 PF05191 Adenylate kinase, active site lid MUW98_10035 PF00762 Ferrochelatase MUW98_10040 PF01124 MAPEG family MUW98_10045 PF00294 pfkB family carbohydrate kinase MUW98_10060 PF03707 Bacterial signalling protein N terminal repeat MUW98_10060 PF00990 Diguanylate cyclase, GGDEF domain MUW98_10060 PF00563 EAL domain MUW98_10065 PF00483 Nucleotidyl transferase MUW98_10075 PF07273 Protein of unknown function (DUF1439) MUW98_10080 PF00425 chorismate binding enzyme MUW98_10085 PF00501 AMP-binding enzyme MUW98_10085 PF13193 AMP-binding enzyme C-terminal domain MUW98_10090 PF00857 Isochorismatase family MUW98_10090 PF00550 Phosphopantetheine attachment site MUW98_10095 PF00501 AMP-binding enzyme MUW98_10095 PF00975 Thioesterase domain MUW98_10095 PF00550 Phosphopantetheine attachment site MUW98_10095 PF00668 Condensation domain MUW98_10095 PF13193 AMP-binding enzyme C-terminal domain MUW98_10105 PF07993 Male sterility protein MUW98_10105 PF00550 Phosphopantetheine attachment site MUW98_10105 PF00501 AMP-binding enzyme MUW98_10105 PF00668 Condensation domain MUW98_10105 PF13193 AMP-binding enzyme C-terminal domain MUW98_10110 PF08659 KR domain MUW98_10110 PF13193 AMP-binding enzyme C-terminal domain MUW98_10110 PF00668 Condensation domain MUW98_10110 PF16197 Ketoacyl-synthetase C-terminal extension MUW98_10110 PF00550 Phosphopantetheine attachment site MUW98_10110 PF02801 Beta-ketoacyl synthase, C-terminal domain MUW98_10110 PF14765 Polyketide synthase dehydratase MUW98_10110 PF00109 Beta-ketoacyl synthase, N-terminal domain MUW98_10110 PF00501 AMP-binding enzyme MUW98_10115 PF01497 Periplasmic binding protein MUW98_10120 PF17837 4'-phosphopantetheinyl transferase N-terminal domain MUW98_10120 PF01648 4'-phosphopantetheinyl transferase superfamily MUW98_10125 PF00005 ABC transporter MUW98_10130 PF01032 FecCD transport family MUW98_10135 PF01032 FecCD transport family MUW98_10140 PF00593 TonB dependent receptor MUW98_10140 PF07715 TonB-dependent Receptor Plug Domain MUW98_10155 PF11143 Protein of unknown function (DUF2919) MUW98_10160 PF01544 CorA-like Mg2+ transporter protein MUW98_10170 PF01012 Electron transfer flavoprotein domain MUW98_10175 PF00766 Electron transfer flavoprotein FAD-binding domain MUW98_10175 PF01012 Electron transfer flavoprotein domain MUW98_10180 PF00266 Aminotransferase class-V MUW98_10185 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MUW98_10190 PF00793 DAHP synthetase I family MUW98_10195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_10195 PF00672 HAMP domain MUW98_10200 PF04055 Radical SAM superfamily MUW98_10205 PF13742 OB-fold nucleic acid binding domain MUW98_10205 PF02601 Exonuclease VII, large subunit MUW98_10210 PF00892 EamA-like transporter family MUW98_10215 PF02472 Biopolymer transport protein ExbD/TolR MUW98_10220 PF01618 MotA/TolQ/ExbB proton channel family MUW98_10230 PF02705 K+ potassium transporter MUW98_10235 PF00571 CBS domain MUW98_10235 PF00478 IMP dehydrogenase / GMP reductase domain MUW98_10240 PF00117 Glutamine amidotransferase class-I MUW98_10240 PF00958 GMP synthase C terminal domain MUW98_10240 PF02540 NAD synthase MUW98_10260 PF02805 Metal binding domain of Ada MUW98_10260 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MUW98_10260 PF12833 Helix-turn-helix domain MUW98_10260 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MUW98_10275 PF05724 Thiopurine S-methyltransferase (TPMT) MUW98_10280 PF00675 Insulinase (Peptidase family M16) MUW98_10280 PF05193 Peptidase M16 inactive domain MUW98_10285 PF00300 Histidine phosphatase superfamily (branch 1) MUW98_10295 PF00892 EamA-like transporter family MUW98_10300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MUW98_10305 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain MUW98_10310 PF03461 TRCF domain MUW98_10310 PF00271 Helicase conserved C-terminal domain MUW98_10310 PF00270 DEAD/DEAH box helicase MUW98_10310 PF17757 UvrB interaction domain MUW98_10310 PF02559 CarD-like/TRCF domain MUW98_10320 PF12704 MacB-like periplasmic core domain MUW98_10320 PF02687 FtsX-like permease family MUW98_10325 PF00005 ABC transporter MUW98_10330 PF12704 MacB-like periplasmic core domain MUW98_10330 PF02687 FtsX-like permease family MUW98_10345 PF05697 Bacterial trigger factor protein (TF) MUW98_10345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MUW98_10345 PF05698 Bacterial trigger factor protein (TF) C-terminus MUW98_10350 PF00574 Clp protease MUW98_10355 PF07724 AAA domain (Cdc48 subfamily) MUW98_10355 PF10431 C-terminal, D2-small domain, of ClpB protein MUW98_10355 PF06689 ClpX C4-type zinc finger MUW98_10360 PF02190 ATP-dependent protease La (LON) substrate-binding domain MUW98_10360 PF05362 Lon protease (S16) C-terminal proteolytic domain MUW98_10360 PF00004 ATPase family associated with various cellular activities (AAA) MUW98_10365 PF00216 Bacterial DNA-binding protein MUW98_10370 PF13145 PPIC-type PPIASE domain MUW98_10375 PF00005 ABC transporter MUW98_10375 PF12848 ABC transporter MUW98_10380 PF00474 Sodium:solute symporter family MUW98_10385 PF04341 Protein of unknown function, DUF485 MUW98_10400 PF00378 Enoyl-CoA hydratase/isomerase MUW98_10420 PF01235 Sodium:alanine symporter family MUW98_10430 PF06167 Glucose-regulated metallo-peptidase M90 MUW98_10435 PF01184 GPR1/FUN34/yaaH family MUW98_10450 PF09278 MerR, DNA binding MUW98_10450 PF00376 MerR family regulatory protein MUW98_10455 PF00682 HMGL-like MUW98_10460 PF02785 Biotin carboxylase C-terminal domain MUW98_10460 PF00289 Biotin carboxylase, N-terminal domain MUW98_10460 PF00364 Biotin-requiring enzyme MUW98_10460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MUW98_10465 PF00378 Enoyl-CoA hydratase/isomerase MUW98_10470 PF01039 Carboxyl transferase domain MUW98_10475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MUW98_10475 PF02770 Acyl-CoA dehydrogenase, middle domain MUW98_10475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MUW98_10480 PF00171 Aldehyde dehydrogenase family MUW98_10485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MUW98_10485 PF02770 Acyl-CoA dehydrogenase, middle domain MUW98_10485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MUW98_10490 PF00378 Enoyl-CoA hydratase/isomerase MUW98_10495 PF00378 Enoyl-CoA hydratase/isomerase MUW98_10500 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MUW98_10500 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MUW98_10510 PF13520 Amino acid permease MUW98_10515 PF01925 Sulfite exporter TauE/SafE MUW98_10535 PF02384 N-6 DNA Methylase MUW98_10560 PF04002 RadC-like JAB domain MUW98_10575 PF00239 Resolvase, N terminal domain MUW98_10575 PF02796 Helix-turn-helix domain of resolvase MUW98_10610 PF00990 Diguanylate cyclase, GGDEF domain MUW98_10610 PF00563 EAL domain MUW98_10610 PF03707 Bacterial signalling protein N terminal repeat MUW98_10610 PF13188 PAS domain MUW98_10615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_10615 PF03466 LysR substrate binding domain MUW98_10620 PF00232 Glycosyl hydrolase family 1 MUW98_10625 PF00563 EAL domain MUW98_10625 PF13188 PAS domain MUW98_10625 PF03707 Bacterial signalling protein N terminal repeat MUW98_10625 PF00990 Diguanylate cyclase, GGDEF domain MUW98_10630 PF00665 Integrase core domain MUW98_10635 PF01695 IstB-like ATP binding protein MUW98_10640 PF00990 Diguanylate cyclase, GGDEF domain MUW98_10650 PF01966 HD domain MUW98_10660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_10660 PF03466 LysR substrate binding domain MUW98_10670 PF00933 Glycosyl hydrolase family 3 N terminal domain MUW98_10675 PF01261 Xylose isomerase-like TIM barrel MUW98_10680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MUW98_10680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MUW98_10685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_10685 PF03466 LysR substrate binding domain MUW98_10695 PF03279 Bacterial lipid A biosynthesis acyltransferase MUW98_10700 PF03279 Bacterial lipid A biosynthesis acyltransferase MUW98_10715 PF17151 Periplasmic sensor domain MUW98_10715 PF00990 Diguanylate cyclase, GGDEF domain MUW98_10725 PF00136 DNA polymerase family B MUW98_10725 PF03104 DNA polymerase family B, exonuclease domain MUW98_10755 PF01554 MatE MUW98_10760 PF06786 Uncharacterised protein family (UPF0253) MUW98_10765 PF00677 Lumazine binding domain MUW98_10775 PF13419 Haloacid dehalogenase-like hydrolase MUW98_10780 PF01370 NAD dependent epimerase/dehydratase family MUW98_10780 PF02222 ATP-grasp domain MUW98_10785 PF00892 EamA-like transporter family MUW98_10790 PF02525 Flavodoxin-like fold MUW98_10815 PF17783 CvfB-like winged helix domain MUW98_10815 PF13509 S1 domain MUW98_10825 PF04269 Protein of unknown function, DUF440 MUW98_10830 PF00912 Transglycosylase MUW98_10835 PF04269 Protein of unknown function, DUF440 MUW98_10840 PF03776 Septum formation topological specificity factor MinE MUW98_10845 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MUW98_10850 PF03775 Septum formation inhibitor MinC, C-terminal domain MUW98_10850 PF05209 Septum formation inhibitor MinC, N-terminal domain MUW98_10855 PF05166 YcgL domain MUW98_10860 PF13406 Transglycosylase SLT domain MUW98_10865 PF03313 Serine dehydratase alpha chain MUW98_10865 PF03315 Serine dehydratase beta chain MUW98_10870 PF03315 Serine dehydratase beta chain MUW98_10870 PF03313 Serine dehydratase alpha chain MUW98_10875 PF06865 Pyrimidine/purine nucleoside phosphorylase MUW98_10880 PF00375 Sodium:dicarboxylate symporter family MUW98_10885 PF00376 MerR family regulatory protein MUW98_10885 PF09278 MerR, DNA binding MUW98_10890 PF00108 Thiolase, N-terminal domain MUW98_10890 PF02803 Thiolase, C-terminal domain MUW98_10895 PF08668 HDOD domain MUW98_10895 PF00563 EAL domain MUW98_10900 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) MUW98_10905 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) MUW98_10915 PF04542 Sigma-70 region 2 MUW98_10915 PF08281 Sigma-70, region 4 MUW98_10940 PF01882 Protein of unknown function DUF58 MUW98_10945 PF07726 ATPase family associated with various cellular activities (AAA) MUW98_10945 PF17863 AAA lid domain MUW98_10950 PF02803 Thiolase, C-terminal domain MUW98_10950 PF00108 Thiolase, N-terminal domain MUW98_10955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MUW98_10955 PF00378 Enoyl-CoA hydratase/isomerase MUW98_10955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MUW98_10965 PF07152 YaeQ protein MUW98_10975 PF02954 Bacterial regulatory protein, Fis family MUW98_10975 PF13188 PAS domain MUW98_10975 PF00158 Sigma-54 interaction domain MUW98_10980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MUW98_10980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MUW98_10985 PF00291 Pyridoxal-phosphate dependent enzyme MUW98_10990 PF07687 Peptidase dimerisation domain MUW98_10990 PF01546 Peptidase family M20/M25/M40 MUW98_10995 PF01979 Amidohydrolase family MUW98_11000 PF00696 Amino acid kinase family MUW98_11005 PF00892 EamA-like transporter family MUW98_11015 PF02625 XdhC and CoxI family MUW98_11015 PF13478 XdhC Rossmann domain MUW98_11025 PF12804 MobA-like NTP transferase domain MUW98_11030 PF07992 Pyridine nucleotide-disulphide oxidoreductase MUW98_11030 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MUW98_11035 PF01979 Amidohydrolase family MUW98_11040 PF00941 FAD binding domain in molybdopterin dehydrogenase MUW98_11045 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MUW98_11045 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MUW98_11045 PF01799 [2Fe-2S] binding domain MUW98_11050 PF00860 Permease family MUW98_11055 PF01979 Amidohydrolase family MUW98_11060 PF00860 Permease family MUW98_11065 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MUW98_11065 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MUW98_11070 PF03450 CO dehydrogenase flavoprotein C-terminal domain MUW98_11070 PF00941 FAD binding domain in molybdopterin dehydrogenase MUW98_11075 PF00111 2Fe-2S iron-sulfur cluster binding domain MUW98_11075 PF01799 [2Fe-2S] binding domain MUW98_11085 PF05433 Glycine zipper 2TM domain MUW98_11095 PF03606 C4-dicarboxylate anaerobic carrier MUW98_11100 PF00501 AMP-binding enzyme MUW98_11100 PF13193 AMP-binding enzyme C-terminal domain MUW98_11110 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase MUW98_11110 PF01502 Phosphoribosyl-AMP cyclohydrolase MUW98_11115 PF00977 Histidine biosynthesis protein MUW98_11120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_11120 PF00512 His Kinase A (phospho-acceptor) domain MUW98_11120 PF01627 Hpt domain MUW98_11120 PF00072 Response regulator receiver domain MUW98_11125 PF00990 Diguanylate cyclase, GGDEF domain MUW98_11125 PF08448 PAS fold MUW98_11130 PF00072 Response regulator receiver domain MUW98_11135 PF00977 Histidine biosynthesis protein MUW98_11140 PF00117 Glutamine amidotransferase class-I MUW98_11145 PF08645 Polynucleotide kinase 3 phosphatase MUW98_11145 PF00475 Imidazoleglycerol-phosphate dehydratase MUW98_11150 PF00155 Aminotransferase class I and II MUW98_11155 PF00815 Histidinol dehydrogenase MUW98_11160 PF01634 ATP phosphoribosyltransferase MUW98_11160 PF08029 HisG, C-terminal domain MUW98_11170 PF13307 Helicase C-terminal domain MUW98_11170 PF04851 Type III restriction enzyme, res subunit MUW98_11175 PF00814 Glycoprotease family MUW98_11185 PF08241 Methyltransferase domain MUW98_11185 PF12697 Alpha/beta hydrolase family MUW98_11190 PF00501 AMP-binding enzyme MUW98_11190 PF13193 AMP-binding enzyme C-terminal domain MUW98_11195 PF01612 3'-5' exonuclease MUW98_11195 PF00570 HRDC domain MUW98_11200 PF00497 Bacterial extracellular solute-binding proteins, family 3 MUW98_11210 PF01207 Dihydrouridine synthase (Dus) MUW98_11215 PF04304 Protein of unknown function (DUF454) MUW98_11220 PF00156 Phosphoribosyl transferase domain MUW98_11225 PF12170 DNA polymerase III tau subunit V interacting with alpha MUW98_11225 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding MUW98_11225 PF12169 DNA polymerase III subunits gamma and tau domain III MUW98_11230 PF02575 YbaB/EbfC DNA-binding family MUW98_11240 PF00072 Response regulator receiver domain MUW98_11240 PF00196 Bacterial regulatory proteins, luxR family MUW98_11245 PF01368 DHH family MUW98_11245 PF01743 Poly A polymerase head domain MUW98_11245 PF02272 DHHA1 domain MUW98_11245 PF00571 CBS domain MUW98_11250 PF00270 DEAD/DEAH box helicase MUW98_11250 PF11898 Domain of unknown function (DUF3418) MUW98_11250 PF04408 Helicase associated domain (HA2) MUW98_11250 PF00271 Helicase conserved C-terminal domain MUW98_11250 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold MUW98_11260 PF01386 Ribosomal L25p family MUW98_11265 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MUW98_11265 PF00072 Response regulator receiver domain MUW98_11265 PF01627 Hpt domain MUW98_11265 PF00512 His Kinase A (phospho-acceptor) domain MUW98_11265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_11265 PF00672 HAMP domain MUW98_11270 PF00072 Response regulator receiver domain MUW98_11275 PF00753 Metallo-beta-lactamase superfamily MUW98_11285 PF00586 AIR synthase related protein, N-terminal domain MUW98_11285 PF02769 AIR synthase related protein, C-terminal domain MUW98_11300 PF10672 S-adenosylmethionine-dependent methyltransferase MUW98_11300 PF17785 PUA-like domain MUW98_11305 PF00672 HAMP domain MUW98_11305 PF12729 Four helix bundle sensory module for signal transduction MUW98_11305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_11310 PF00708 Acylphosphatase MUW98_11320 PF00043 Glutathione S-transferase, C-terminal domain MUW98_11320 PF02798 Glutathione S-transferase, N-terminal domain MUW98_11325 PF08264 Anticodon-binding domain of tRNA MUW98_11325 PF09334 tRNA synthetases class I (M) MUW98_11325 PF01588 Putative tRNA binding domain MUW98_11330 PF10609 NUBPL iron-transfer P-loop NTPase MUW98_11335 PF00485 Phosphoribulokinase / Uridine kinase family MUW98_11340 PF00692 dUTPase MUW98_11345 PF01384 Phosphate transporter family MUW98_11350 PF00575 S1 RNA binding domain MUW98_11350 PF10150 Ribonuclease E/G family MUW98_11350 PF12111 Polyribonucleotide phosphorylase C terminal MUW98_11355 PF00849 RNA pseudouridylate synthase MUW98_11355 PF01479 S4 domain MUW98_11360 PF13419 Haloacid dehalogenase-like hydrolase MUW98_11365 PF02545 Maf-like protein MUW98_11370 PF07690 Major Facilitator Superfamily MUW98_11375 PF03466 LysR substrate binding domain MUW98_11375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_11385 PF02620 Large ribosomal RNA subunit accumulation protein YceD MUW98_11390 PF01783 Ribosomal L32p protein family MUW98_11395 PF02504 Fatty acid synthesis protein MUW98_11400 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MUW98_11400 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MUW98_11405 PF00698 Acyl transferase domain MUW98_11415 PF00550 Phosphopantetheine attachment site MUW98_11420 PF02801 Beta-ketoacyl synthase, C-terminal domain MUW98_11420 PF00109 Beta-ketoacyl synthase, N-terminal domain MUW98_11425 PF01063 Amino-transferase class IV MUW98_11430 PF02618 YceG-like family MUW98_11435 PF02223 Thymidylate kinase MUW98_11440 PF09115 DNA polymerase III, delta subunit, C terminal MUW98_11445 PF01026 TatD related DNase MUW98_11450 PF00589 Phage integrase family MUW98_11460 PF01189 16S rRNA methyltransferase RsmB/F MUW98_11460 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF MUW98_11460 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF MUW98_11465 PF02470 MlaD protein MUW98_11470 PF04403 Paraquat-inducible protein A MUW98_11485 PF00285 Citrate synthase, C-terminal domain MUW98_11490 PF03972 MmgE/PrpD family MUW98_11505 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain MUW98_11505 PF06974 Protein of unknown function (DUF1298) MUW98_11530 PF00106 short chain dehydrogenase MUW98_11540 PF07130 YebG protein MUW98_11630 PF01381 Helix-turn-helix MUW98_11640 PF00356 Bacterial regulatory proteins, lacI family MUW98_11645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_11645 PF03466 LysR substrate binding domain MUW98_11650 PF02129 X-Pro dipeptidyl-peptidase (S15 family) MUW98_11660 PF07690 Major Facilitator Superfamily MUW98_11665 PF00107 Zinc-binding dehydrogenase MUW98_11665 PF08240 Alcohol dehydrogenase GroES-like domain MUW98_11670 PF03466 LysR substrate binding domain MUW98_11670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_11675 PF00248 Aldo/keto reductase family MUW98_11740 PF08447 PAS fold MUW98_11740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_11755 PF13610 DDE domain MUW98_11760 PF01636 Phosphotransferase enzyme family MUW98_11775 PF13610 DDE domain MUW98_11785 PF03551 Transcriptional regulator PadR-like family MUW98_11800 PF00872 Transposase, Mutator family MUW98_11805 PF00809 Pterin binding enzyme MUW98_11830 PF00664 ABC transporter transmembrane region MUW98_11830 PF00005 ABC transporter MUW98_11850 PF00809 Pterin binding enzyme MUW98_11855 PF00893 Small Multidrug Resistance protein MUW98_11860 PF00132 Bacterial transferase hexapeptide (six repeats) MUW98_11865 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system MUW98_11870 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system MUW98_11885 PF13495 Phage integrase, N-terminal SAM-like domain MUW98_11885 PF00589 Phage integrase family MUW98_11890 PF00239 Resolvase, N terminal domain MUW98_11890 PF02796 Helix-turn-helix domain of resolvase MUW98_11895 PF01526 Tn3 transposase DDE domain MUW98_11895 PF13700 Domain of unknown function (DUF4158) MUW98_11905 PF13533 Biotin-lipoyl like MUW98_11915 PF03466 LysR substrate binding domain MUW98_11915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_11925 PF00106 short chain dehydrogenase MUW98_11935 PF12833 Helix-turn-helix domain MUW98_11935 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term MUW98_11945 PF00248 Aldo/keto reductase family MUW98_11970 PF00672 HAMP domain MUW98_11970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_11970 PF00512 His Kinase A (phospho-acceptor) domain MUW98_11975 PF00486 Transcriptional regulatory protein, C terminal MUW98_11975 PF00072 Response regulator receiver domain MUW98_11980 PF00248 Aldo/keto reductase family MUW98_11985 PF02129 X-Pro dipeptidyl-peptidase (S15 family) MUW98_11990 PF07690 Major Facilitator Superfamily MUW98_12000 PF12706 Beta-lactamase superfamily domain MUW98_12005 PF00248 Aldo/keto reductase family MUW98_12010 PF00465 Iron-containing alcohol dehydrogenase MUW98_12015 PF03466 LysR substrate binding domain MUW98_12015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_12020 PF09722 Protein of unknown function (DUF2384) MUW98_12050 PF13654 AAA domain MUW98_12050 PF05362 Lon protease (S16) C-terminal proteolytic domain MUW98_12055 PF07977 FabA-like domain MUW98_12060 PF04957 Ribosome modulation factor MUW98_12070 PF16326 ABC transporter C-terminal domain MUW98_12070 PF00005 ABC transporter MUW98_12070 PF12848 ABC transporter MUW98_12080 PF10672 S-adenosylmethionine-dependent methyltransferase MUW98_12080 PF02926 THUMP domain MUW98_12080 PF01170 Putative RNA methylase family UPF0020 MUW98_12085 PF07126 Cell-division protein ZapC MUW98_12090 PF01180 Dihydroorotate dehydrogenase MUW98_12095 PF05088 Bacterial NAD-glutamate dehydrogenase MUW98_12105 PF11940 Domain of unknown function (DUF3458) Ig-like fold MUW98_12105 PF01433 Peptidase family M1 domain MUW98_12105 PF17432 Domain of unknown function (DUF3458_C) ARM repeats MUW98_12110 PF17804 Tail specific protease N-terminal domain MUW98_12110 PF00595 PDZ domain MUW98_12110 PF03572 Peptidase family S41 MUW98_12110 PF11818 C-terminal domain of tail specific protease (DUF3340) MUW98_12115 PF04352 ProQ/FINO family MUW98_12115 PF17516 ProQ C-terminal domain MUW98_12120 PF13185 GAF domain MUW98_12130 PF00115 Cytochrome C and Quinol oxidase polypeptide I MUW98_12145 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MUW98_12145 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP MUW98_12155 PF00403 Heavy-metal-associated domain MUW98_12170 PF13545 Crp-like helix-turn-helix domain MUW98_12170 PF00027 Cyclic nucleotide-binding domain MUW98_12175 PF00582 Universal stress protein family MUW98_12180 PF01171 PP-loop family MUW98_12195 PF02798 Glutathione S-transferase, N-terminal domain MUW98_12195 PF00043 Glutathione S-transferase, C-terminal domain MUW98_12200 PF05025 RbsD / FucU transport protein family MUW98_12205 PF00005 ABC transporter MUW98_12210 PF02653 Branched-chain amino acid transport system / permease component MUW98_12215 PF13407 Periplasmic binding protein domain MUW98_12220 PF00294 pfkB family carbohydrate kinase MUW98_12225 PF00356 Bacterial regulatory proteins, lacI family MUW98_12230 PF00990 Diguanylate cyclase, GGDEF domain MUW98_12230 PF00563 EAL domain MUW98_12230 PF03707 Bacterial signalling protein N terminal repeat MUW98_12240 PF02146 Sir2 family MUW98_12255 PF00512 His Kinase A (phospho-acceptor) domain MUW98_12255 PF00072 Response regulator receiver domain MUW98_12255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_12255 PF09456 RcsC Alpha-Beta-Loop (ABL) MUW98_12260 PF00216 Bacterial DNA-binding protein MUW98_12265 PF03483 B3/4 domain MUW98_12265 PF03484 tRNA synthetase B5 domain MUW98_12265 PF03147 Ferredoxin-fold anticodon binding domain MUW98_12265 PF01588 Putative tRNA binding domain MUW98_12265 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MUW98_12270 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MUW98_12270 PF01409 tRNA synthetases class II core domain (F) MUW98_12275 PF00453 Ribosomal protein L20 MUW98_12280 PF01632 Ribosomal protein L35 MUW98_12285 PF05198 Translation initiation factor IF-3, N-terminal domain MUW98_12285 PF00707 Translation initiation factor IF-3, C-terminal domain MUW98_12290 PF02824 TGS domain MUW98_12290 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MUW98_12290 PF03129 Anticodon binding domain MUW98_12290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MUW98_12300 PF04055 Radical SAM superfamily MUW98_12310 PF03989 DNA gyrase C-terminal domain, beta-propeller MUW98_12310 PF00521 DNA gyrase/topoisomerase IV, subunit A MUW98_12320 PF13419 Haloacid dehalogenase-like hydrolase MUW98_12325 PF00317 Ribonucleotide reductase, all-alpha domain MUW98_12325 PF02867 Ribonucleotide reductase, barrel domain MUW98_12325 PF03477 ATP cone domain MUW98_12330 PF00268 Ribonucleotide reductase, small chain MUW98_12335 PF00111 2Fe-2S iron-sulfur cluster binding domain MUW98_12340 PF06725 3D domain MUW98_12340 PF03562 MltA specific insert domain MUW98_12345 PF06945 Protein of unknown function (DUF1289) MUW98_12355 PF03613 PTS system mannose/fructose/sorbose family IID component MUW98_12360 PF03609 PTS system sorbose-specific iic component MUW98_12365 PF03610 PTS system fructose IIA component MUW98_12365 PF03830 PTS system sorbose subfamily IIB component MUW98_12380 PF00356 Bacterial regulatory proteins, lacI family MUW98_12380 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MUW98_12385 PF06560 Glucose-6-phosphate isomerase (GPI) MUW98_12390 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MUW98_12390 PF02378 Phosphotransferase system, EIIC MUW98_12395 PF00294 pfkB family carbohydrate kinase MUW98_12400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MUW98_12400 PF00381 PTS HPr component phosphorylation site MUW98_12405 PF00356 Bacterial regulatory proteins, lacI family MUW98_12405 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MUW98_12410 PF03222 Tryptophan/tyrosine permease family MUW98_12425 PF00270 DEAD/DEAH box helicase MUW98_12425 PF00271 Helicase conserved C-terminal domain MUW98_12435 PF01264 Chorismate synthase MUW98_12440 PF05175 Methyltransferase small domain MUW98_12445 PF01713 Smr domain MUW98_12455 PF00990 Diguanylate cyclase, GGDEF domain MUW98_12455 PF08448 PAS fold MUW98_12460 PF00300 Histidine phosphatase superfamily (branch 1) MUW98_12480 PF00704 Glycosyl hydrolases family 18 MUW98_12480 PF08329 Chitinase A, N-terminal domain MUW98_12490 PF03831 PhnA domain MUW98_12490 PF08274 PhnA Zinc-Ribbon MUW98_12500 PF02567 Phenazine biosynthesis-like protein MUW98_12530 PF01327 Polypeptide deformylase MUW98_12545 PF03330 Lytic transglycolase MUW98_12545 PF05036 Sporulation related domain MUW98_12550 PF04310 MukB N-terminal MUW98_12550 PF16330 MukB hinge domain MUW98_12555 PF04288 MukE-like family MUW98_12560 PF03882 MukF winged-helix domain MUW98_12560 PF17193 MukF C-terminal domain MUW98_12560 PF17192 MukF middle domain MUW98_12565 PF13847 Methyltransferase domain MUW98_12570 PF02698 DUF218 domain MUW98_12575 PF00121 Triosephosphate isomerase MUW98_12580 PF00365 Phosphofructokinase MUW98_12585 PF01546 Peptidase family M20/M25/M40 MUW98_12585 PF07687 Peptidase dimerisation domain MUW98_12590 PF13419 Haloacid dehalogenase-like hydrolase MUW98_12595 PF02789 Cytosol aminopeptidase family, N-terminal domain MUW98_12595 PF00883 Cytosol aminopeptidase family, catalytic domain MUW98_12635 PF00128 Alpha amylase, catalytic domain MUW98_12635 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MUW98_12645 PF11398 Protein of unknown function (DUF2813) MUW98_12650 PF14525 AraC-binding-like domain MUW98_12650 PF12833 Helix-turn-helix domain MUW98_12660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_12660 PF03466 LysR substrate binding domain MUW98_12665 PF01925 Sulfite exporter TauE/SafE MUW98_12670 PF03942 DTW domain MUW98_12675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MUW98_12675 PF18029 Glyoxalase-like domain MUW98_12680 PF07478 D-ala D-ala ligase C-terminus MUW98_12680 PF01820 D-ala D-ala ligase N-terminus MUW98_12690 PF00255 Glutathione peroxidase MUW98_12695 PF00271 Helicase conserved C-terminal domain MUW98_12695 PF00270 DEAD/DEAH box helicase MUW98_12700 PF13673 Acetyltransferase (GNAT) domain MUW98_12710 PF02694 Uncharacterised BCR, YnfA/UPF0060 family MUW98_12720 PF01928 CYTH domain MUW98_12730 PF00583 Acetyltransferase (GNAT) family MUW98_12735 PF00465 Iron-containing alcohol dehydrogenase MUW98_12740 PF03992 Antibiotic biosynthesis monooxygenase MUW98_12745 PF08543 Phosphomethylpyrimidine kinase MUW98_12770 PF01575 MaoC like domain MUW98_12790 PF00005 ABC transporter MUW98_12790 PF00664 ABC transporter transmembrane region MUW98_12795 PF00005 ABC transporter MUW98_12795 PF00664 ABC transporter transmembrane region MUW98_12800 PF01627 Hpt domain MUW98_12800 PF00512 His Kinase A (phospho-acceptor) domain MUW98_12800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_12800 PF00672 HAMP domain MUW98_12800 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MUW98_12800 PF00072 Response regulator receiver domain MUW98_12805 PF00085 Thioredoxin MUW98_12810 PF00939 Sodium:sulfate symporter transmembrane region MUW98_12815 PF00343 Carbohydrate phosphorylase MUW98_12835 PF00425 chorismate binding enzyme MUW98_12835 PF04715 Anthranilate synthase component I, N terminal region MUW98_12840 PF00293 NUDIX domain MUW98_12845 PF03222 Tryptophan/tyrosine permease family MUW98_12850 PF00375 Sodium:dicarboxylate symporter family MUW98_12855 PF00270 DEAD/DEAH box helicase MUW98_12855 PF00271 Helicase conserved C-terminal domain MUW98_12855 PF00570 HRDC domain MUW98_12855 PF16124 RecQ zinc-binding MUW98_12855 PF09382 RQC domain MUW98_12860 PF06798 PrkA serine protein kinase C-terminal domain MUW98_12860 PF08298 PrkA AAA domain MUW98_12865 PF04285 Protein of unknown function (DUF444) MUW98_12870 PF04293 SpoVR like protein MUW98_12875 PF07840 FadR C-terminal domain MUW98_12875 PF00392 Bacterial regulatory proteins, gntR family MUW98_12880 PF06450 Bacterial Na+/H+ antiporter B (NhaB) MUW98_12885 PF02600 Disulfide bond formation protein DsbB MUW98_12890 PF09335 SNARE associated Golgi protein MUW98_12900 PF17757 UvrB interaction domain MUW98_12900 PF00271 Helicase conserved C-terminal domain MUW98_12900 PF04851 Type III restriction enzyme, res subunit MUW98_12900 PF02151 UvrB/uvrC motif MUW98_12900 PF12344 Ultra-violet resistance protein B MUW98_12910 PF02080 TrkA-C domain MUW98_12910 PF06826 Predicted Permease Membrane Region MUW98_12930 PF01970 Tripartite tricarboxylate transporter TctA family MUW98_12935 PF08279 HTH domain MUW98_12935 PF00072 Response regulator receiver domain MUW98_12935 PF12431 Transcriptional regulator MUW98_12940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_12940 PF00989 PAS fold MUW98_12940 PF17203 Single cache domain 3 MUW98_12940 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain MUW98_12945 PF00480 ROK family MUW98_12945 PF01047 MarR family MUW98_12950 PF17200 Single Cache domain 2 MUW98_12950 PF00672 HAMP domain MUW98_12950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_12955 PF02810 SEC-C motif MUW98_12960 PF04324 BFD-like [2Fe-2S] binding domain MUW98_12960 PF01266 FAD dependent oxidoreductase MUW98_12965 PF00890 FAD binding domain MUW98_12970 PF02754 Cysteine-rich domain MUW98_12970 PF13183 4Fe-4S dicluster domain MUW98_12985 PF02335 Cytochrome c552 MUW98_12990 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) MUW98_12990 PF13435 Cytochrome c554 and c-prime MUW98_12995 PF00037 4Fe-4S binding domain MUW98_12995 PF13247 4Fe-4S dicluster domain MUW98_13000 PF03916 Polysulphide reductase, NrfD MUW98_13005 PF01578 Cytochrome C assembly protein MUW98_13005 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal MUW98_13010 PF08534 Redoxin MUW98_13015 PF03918 Cytochrome C biogenesis protein MUW98_13020 PF00293 NUDIX domain MUW98_13025 PF00768 D-alanyl-D-alanine carboxypeptidase MUW98_13030 PF01212 Beta-eliminating lyase MUW98_13040 PF04244 Deoxyribodipyrimidine photo-lyase-related protein MUW98_13045 PF01266 FAD dependent oxidoreductase MUW98_13055 PF07969 Amidohydrolase family MUW98_13060 PF00478 IMP dehydrogenase / GMP reductase domain MUW98_13060 PF00571 CBS domain MUW98_13070 PF01717 Cobalamin-independent synthase, Catalytic domain MUW98_13070 PF08267 Cobalamin-independent synthase, N-terminal domain MUW98_13075 PF03466 LysR substrate binding domain MUW98_13075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_13085 PF07715 TonB-dependent Receptor Plug Domain MUW98_13085 PF00593 TonB dependent receptor MUW98_13090 PF12833 Helix-turn-helix domain MUW98_13095 PF00106 short chain dehydrogenase MUW98_13100 PF03466 LysR substrate binding domain MUW98_13100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_13105 PF13460 NAD(P)H-binding MUW98_13115 PF01053 Cys/Met metabolism PLP-dependent enzyme MUW98_13120 PF05193 Peptidase M16 inactive domain MUW98_13120 PF00675 Insulinase (Peptidase family M16) MUW98_13125 PF01118 Semialdehyde dehydrogenase, NAD binding domain MUW98_13125 PF02774 Semialdehyde dehydrogenase, dimerisation domain MUW98_13130 PF00893 Small Multidrug Resistance protein MUW98_13135 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding MUW98_13135 PF18381 YcaO cyclodehydratase C-terminal domain MUW98_13140 PF01226 Formate/nitrite transporter MUW98_13145 PF01228 Glycine radical MUW98_13145 PF02901 Pyruvate formate lyase-like MUW98_13155 PF00202 Aminotransferase class-III MUW98_13160 PF00266 Aminotransferase class-V MUW98_13165 PF07702 UTRA domain MUW98_13165 PF00392 Bacterial regulatory proteins, gntR family MUW98_13175 PF00005 ABC transporter MUW98_13180 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_13185 PF01266 FAD dependent oxidoreductase MUW98_13190 PF03692 Putative zinc- or iron-chelating domain MUW98_13205 PF00549 CoA-ligase MUW98_13205 PF02629 CoA binding domain MUW98_13210 PF00549 CoA-ligase MUW98_13210 PF08442 ATP-grasp domain MUW98_13215 PF00364 Biotin-requiring enzyme MUW98_13215 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MUW98_13215 PF02817 e3 binding domain MUW98_13220 PF02779 Transketolase, pyrimidine binding domain MUW98_13220 PF16078 2-oxoglutarate dehydrogenase N-terminus MUW98_13220 PF00676 Dehydrogenase E1 component MUW98_13220 PF16870 2-oxoglutarate dehydrogenase C-terminal MUW98_13225 PF13085 2Fe-2S iron-sulfur cluster binding domain MUW98_13230 PF00890 FAD binding domain MUW98_13230 PF02910 Fumarate reductase flavoprotein C-term MUW98_13235 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MUW98_13240 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MUW98_13245 PF00285 Citrate synthase, C-terminal domain MUW98_13260 PF02801 Beta-ketoacyl synthase, C-terminal domain MUW98_13260 PF00109 Beta-ketoacyl synthase, N-terminal domain MUW98_13265 PF01266 FAD dependent oxidoreductase MUW98_13265 PF05430 S-adenosyl-L-methionine-dependent methyltransferase MUW98_13275 PF03606 C4-dicarboxylate anaerobic carrier MUW98_13290 PF01863 Protein of unknown function DUF45 MUW98_13305 PF01197 Ribosomal protein L31 MUW98_13310 PF00444 Ribosomal protein L36 MUW98_13315 PF02678 Pirin MUW98_13315 PF05726 Pirin C-terminal cupin domain MUW98_13320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_13320 PF03466 LysR substrate binding domain MUW98_13325 PF02311 AraC-like ligand binding domain MUW98_13325 PF12833 Helix-turn-helix domain MUW98_13335 PF00005 ABC transporter MUW98_13340 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MUW98_13345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MUW98_13350 PF00596 Class II Aldolase and Adducin N-terminal domain MUW98_13355 PF11762 L-arabinose isomerase C-terminal domain MUW98_13355 PF02610 L-arabinose isomerase MUW98_13360 PF08411 Exonuclease C-terminal MUW98_13360 PF00929 Exonuclease MUW98_13375 PF03788 LrgA family MUW98_13380 PF04172 LrgB-like family MUW98_13385 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MUW98_13385 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region MUW98_13390 PF00501 AMP-binding enzyme MUW98_13395 PF08891 YfcL protein MUW98_13405 PF03741 Integral membrane protein TerC family MUW98_13410 PF00691 OmpA family MUW98_13415 PF00990 Diguanylate cyclase, GGDEF domain MUW98_13415 PF17152 Periplasmic sensor domain MUW98_13420 PF13689 YfiR/HmsC-like MUW98_13425 PF18024 Helix-turn-helix domain MUW98_13425 PF00158 Sigma-54 interaction domain MUW98_13440 PF01329 Pterin 4 alpha carbinolamine dehydratase MUW98_13445 PF00351 Biopterin-dependent aromatic amino acid hydroxylase MUW98_13450 PF05128 Domain of unknown function (DUF697) MUW98_13455 PF04317 YcjX-like family, DUF463 MUW98_13465 PF06667 Phage shock protein B MUW98_13470 PF04012 PspA/IM30 family MUW98_13475 PF02954 Bacterial regulatory protein, Fis family MUW98_13475 PF00158 Sigma-54 interaction domain MUW98_13480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MUW98_13485 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_13490 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_13490 PF12911 N-terminal TM domain of oligopeptide transport permease C MUW98_13495 PF00005 ABC transporter MUW98_13495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MUW98_13500 PF00005 ABC transporter MUW98_13505 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) MUW98_13510 PF00156 Phosphoribosyl transferase domain MUW98_13515 PF02674 Colicin V production protein MUW98_13520 PF02403 Seryl-tRNA synthetase N-terminal domain MUW98_13520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MUW98_13525 PF00004 ATPase family associated with various cellular activities (AAA) MUW98_13525 PF16193 AAA C-terminal domain MUW98_13525 PF12002 MgsA AAA+ ATPase C terminal MUW98_13530 PF03548 Outer membrane lipoprotein carrier protein LolA MUW98_13535 PF09397 Ftsk gamma domain MUW98_13535 PF01580 FtsK/SpoIIIE family MUW98_13535 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MUW98_13535 PF17854 FtsK alpha domain MUW98_13540 PF01037 Lrp/AsnC ligand binding domain MUW98_13545 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MUW98_13545 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MUW98_13550 PF07992 Pyridine nucleotide-disulphide oxidoreductase MUW98_13555 PF00990 Diguanylate cyclase, GGDEF domain MUW98_13555 PF17158 Membrane-associated sensor, integral membrane domain MUW98_13560 PF05433 Glycine zipper 2TM domain MUW98_13565 PF03588 Leucyl/phenylalanyl-tRNA protein transferase MUW98_13570 PF04376 Arginine-tRNA-protein transferase, N terminus MUW98_13570 PF04377 Arginine-tRNA-protein transferase, C terminus MUW98_13575 PF01176 Translation initiation factor 1A / IF-1 MUW98_13580 PF00004 ATPase family associated with various cellular activities (AAA) MUW98_13580 PF07724 AAA domain (Cdc48 subfamily) MUW98_13580 PF17871 AAA lid domain MUW98_13580 PF02861 Clp amino terminal domain, pathogenicity island component MUW98_13580 PF10431 C-terminal, D2-small domain, of ClpB protein MUW98_13585 PF02617 ATP-dependent Clp protease adaptor protein ClpS MUW98_13590 PF00313 'Cold-shock' DNA-binding domain MUW98_13595 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MUW98_13595 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MUW98_13630 PF00665 Integrase core domain MUW98_13635 PF01695 IstB-like ATP binding protein MUW98_13650 PF03050 Transposase IS66 family MUW98_13650 PF13817 IS66 C-terminal element MUW98_13650 PF13007 Transposase C of IS166 homeodomain MUW98_13650 PF13005 zinc-finger binding domain of transposase IS66 MUW98_13670 PF00872 Transposase, Mutator family MUW98_13730 PF07804 HipA-like C-terminal domain MUW98_13730 PF13657 HipA N-terminal domain MUW98_13735 PF00665 Integrase core domain MUW98_13740 PF01695 IstB-like ATP binding protein MUW98_13775 PF04717 Type VI secretion system, phage-baseplate injector MUW98_13805 PF00158 Sigma-54 interaction domain MUW98_13805 PF02954 Bacterial regulatory protein, Fis family MUW98_13810 PF07724 AAA domain (Cdc48 subfamily) MUW98_13810 PF10431 C-terminal, D2-small domain, of ClpB protein MUW98_13810 PF17871 AAA lid domain MUW98_13810 PF00004 ATPase family associated with various cellular activities (AAA) MUW98_13820 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE MUW98_13840 PF05947 Type VI secretion system, TssF MUW98_13850 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath MUW98_13880 PF04717 Type VI secretion system, phage-baseplate injector MUW98_13885 PF05638 Type VI secretion system effector, Hcp MUW98_13900 PF10722 Putative bacterial sensory transduction regulator MUW98_13910 PF00265 Thymidine kinase MUW98_13915 PF03553 Na+/H+ antiporter family MUW98_13925 PF00816 H-NS histone family MUW98_13930 PF01923 Cobalamin adenosyltransferase MUW98_13935 PF12843 Putative quorum-sensing-regulated virulence factor MUW98_13940 PF04055 Radical SAM superfamily MUW98_13945 PF06508 Queuosine biosynthesis protein QueC MUW98_13960 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MUW98_13965 PF18073 Rubredoxin metal binding domain MUW98_13975 PF00216 Bacterial DNA-binding protein MUW98_13980 PF00575 S1 RNA binding domain MUW98_13985 PF02224 Cytidylate kinase MUW98_13990 PF00925 GTP cyclohydrolase II MUW98_13995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_13995 PF03466 LysR substrate binding domain MUW98_14000 PF03466 LysR substrate binding domain MUW98_14000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_14005 PF07690 Major Facilitator Superfamily MUW98_14020 PF00881 Nitroreductase family MUW98_14025 PF00563 EAL domain MUW98_14025 PF13188 PAS domain MUW98_14025 PF03707 Bacterial signalling protein N terminal repeat MUW98_14025 PF00990 Diguanylate cyclase, GGDEF domain MUW98_14035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_14035 PF03466 LysR substrate binding domain MUW98_14040 PF00072 Response regulator receiver domain MUW98_14050 PF01212 Beta-eliminating lyase MUW98_14065 PF00248 Aldo/keto reductase family MUW98_14070 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MUW98_14080 PF03411 Penicillin-insensitive murein endopeptidase MUW98_14090 PF04536 TPM domain MUW98_14105 PF01618 MotA/TolQ/ExbB proton channel family MUW98_14110 PF00691 OmpA family MUW98_14110 PF13677 Membrane MotB of proton-channel complex MotA/MotB MUW98_14115 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 MUW98_14120 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MUW98_14125 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MUW98_14125 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MUW98_14135 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MUW98_14135 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MUW98_14140 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MUW98_14140 PF00384 Molybdopterin oxidoreductase MUW98_14140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MUW98_14145 PF00146 NADH dehydrogenase MUW98_14150 PF12838 4Fe-4S dicluster domain MUW98_14155 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 MUW98_14160 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MUW98_14165 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MUW98_14165 PF00361 Proton-conducting membrane transporter MUW98_14170 PF00361 Proton-conducting membrane transporter MUW98_14175 PF00361 Proton-conducting membrane transporter MUW98_14180 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MUW98_14180 PF02769 AIR synthase related protein, C-terminal domain MUW98_14180 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal MUW98_14185 PF00497 Bacterial extracellular solute-binding proteins, family 3 MUW98_14185 PF01464 Transglycosylase SLT domain MUW98_14190 PF07191 zinc-ribbons MUW98_14195 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MUW98_14195 PF01926 50S ribosome-binding GTPase MUW98_14200 PF13360 PQQ-like domain MUW98_14205 PF09976 Tetratricopeptide repeat-like domain MUW98_14210 PF03129 Anticodon binding domain MUW98_14210 PF13393 Histidyl-tRNA synthetase MUW98_14215 PF04551 GcpE protein MUW98_14220 PF13464 Domain of unknown function (DUF4115) MUW98_14230 PF04055 Radical SAM superfamily MUW98_14235 PF00334 Nucleoside diphosphate kinase MUW98_14240 PF00883 Cytosol aminopeptidase family, catalytic domain MUW98_14240 PF12404 Peptidase MUW98_14245 PF12404 Peptidase MUW98_14245 PF00883 Cytosol aminopeptidase family, catalytic domain MUW98_14250 PF00111 2Fe-2S iron-sulfur cluster binding domain MUW98_14255 PF00012 Hsp70 protein MUW98_14260 PF07743 HSCB C-terminal oligomerisation domain MUW98_14265 PF01521 Iron-sulphur cluster biosynthesis MUW98_14270 PF01592 NifU-like N terminal domain MUW98_14275 PF00266 Aminotransferase class-V MUW98_14280 PF02082 Transcriptional regulator MUW98_14285 PF00588 SpoU rRNA Methylase family MUW98_14295 PF02036 SCP-2 sterol transfer family MUW98_14300 PF01136 Peptidase family U32 MUW98_14305 PF01136 Peptidase family U32 MUW98_14310 PF07719 Tetratricopeptide repeat MUW98_14310 PF13181 Tetratricopeptide repeat MUW98_14320 PF02355 Protein export membrane protein MUW98_14320 PF07549 SecD/SecF GG Motif MUW98_14325 PF02355 Protein export membrane protein MUW98_14325 PF07549 SecD/SecF GG Motif MUW98_14325 PF13721 SecD export protein N-terminal TM region MUW98_14330 PF02699 Preprotein translocase subunit MUW98_14335 PF01702 Queuine tRNA-ribosyltransferase MUW98_14340 PF02547 Queuosine biosynthesis protein MUW98_14345 PF00571 CBS domain MUW98_14350 PF10417 C-terminal domain of 1-Cys peroxiredoxin MUW98_14350 PF00578 AhpC/TSA family MUW98_14355 PF07992 Pyridine nucleotide-disulphide oxidoreductase MUW98_14355 PF13192 Thioredoxin domain MUW98_14360 PF07690 Major Facilitator Superfamily MUW98_14370 PF08241 Methyltransferase domain MUW98_14375 PF03960 ArsC family MUW98_14380 PF01758 Sodium Bile acid symporter family MUW98_14385 PF02374 Anion-transporting ATPase MUW98_14390 PF06953 Arsenical resistance operon trans-acting repressor ArsD MUW98_14410 PF02347 Glycine cleavage system P-protein MUW98_14415 PF01597 Glycine cleavage H-protein MUW98_14420 PF01571 Aminomethyltransferase folate-binding domain MUW98_14420 PF08669 Glycine cleavage T-protein C-terminal barrel domain MUW98_14425 PF01494 FAD binding domain MUW98_14430 PF01494 FAD binding domain MUW98_14435 PF03695 Uncharacterised protein family (UPF0149) MUW98_14440 PF05164 Cell division protein ZapA MUW98_14450 PF07690 Major Facilitator Superfamily MUW98_14455 PF00043 Glutathione S-transferase, C-terminal domain MUW98_14455 PF02798 Glutathione S-transferase, N-terminal domain MUW98_14465 PF00459 Inositol monophosphatase family MUW98_14470 PF00672 HAMP domain MUW98_14470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_14470 PF12729 Four helix bundle sensory module for signal transduction MUW98_14475 PF02535 ZIP Zinc transporter MUW98_14485 PF01048 Phosphorylase superfamily MUW98_14495 PF01497 Periplasmic binding protein MUW98_14500 PF02719 Polysaccharide biosynthesis protein MUW98_14505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MUW98_14515 PF03102 NeuB family MUW98_14515 PF08666 SAF domain MUW98_14520 PF02350 UDP-N-acetylglucosamine 2-epimerase MUW98_14535 PF00483 Nucleotidyl transferase MUW98_14540 PF02348 Cytidylyltransferase MUW98_14555 PF02561 Flagellar protein FliS MUW98_14560 PF07196 Flagellin hook IN motif MUW98_14560 PF07195 Flagellar hook-associated protein 2 C-terminus MUW98_14560 PF02465 Flagellar hook-associated protein 2 N-terminus MUW98_14570 PF00700 Bacterial flagellin C-terminal helical region MUW98_14570 PF07196 Flagellin hook IN motif MUW98_14570 PF00669 Bacterial flagellin N-terminal helical region MUW98_14575 PF00700 Bacterial flagellin C-terminal helical region MUW98_14575 PF07196 Flagellin hook IN motif MUW98_14575 PF00669 Bacterial flagellin N-terminal helical region MUW98_14580 PF03458 UPF0126 domain MUW98_14590 PF02568 Thiamine biosynthesis protein (ThiI) MUW98_14590 PF02926 THUMP domain MUW98_14600 PF06832 Penicillin-Binding Protein C-terminus Family MUW98_14600 PF00912 Transglycosylase MUW98_14600 PF00905 Penicillin binding protein transpeptidase domain MUW98_14605 PF07678 A-macroglobulin TED domain MUW98_14605 PF01835 MG2 domain MUW98_14605 PF17962 Bacterial macroglobulin domain 6 MUW98_14605 PF11974 Bacterial alpha-2-macroglobulin MG3 domain MUW98_14605 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain MUW98_14605 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain MUW98_14605 PF07703 Alpha-2-macroglobulin bait region domain MUW98_14605 PF00207 Alpha-2-macroglobulin family MUW98_14605 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain MUW98_14610 PF07992 Pyridine nucleotide-disulphide oxidoreductase MUW98_14610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MUW98_14615 PF03707 Bacterial signalling protein N terminal repeat MUW98_14615 PF00990 Diguanylate cyclase, GGDEF domain MUW98_14615 PF00563 EAL domain MUW98_14620 PF04055 Radical SAM superfamily MUW98_14630 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_14635 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_14640 PF00497 Bacterial extracellular solute-binding proteins, family 3 MUW98_14645 PF00005 ABC transporter MUW98_14650 PF03956 Lysine exporter LysO MUW98_14655 PF01979 Amidohydrolase family MUW98_14660 PF04336 Acyl carrier protein phosphodiesterase MUW98_14675 PF03960 ArsC family MUW98_14680 PF00578 AhpC/TSA family MUW98_14685 PF01435 Peptidase family M48 MUW98_14685 PF13181 Tetratricopeptide repeat MUW98_14690 PF01206 Sulfurtransferase TusA MUW98_14695 PF01594 AI-2E family transporter MUW98_14705 PF00561 alpha/beta hydrolase fold MUW98_14710 PF03976 Polyphosphate kinase 2 (PPK2) MUW98_14715 PF00005 ABC transporter MUW98_14715 PF08402 TOBE domain MUW98_14720 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_14725 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_14725 PF14785 Maltose transport system permease protein MalF P2 domain MUW98_14730 PF01547 Bacterial extracellular solute-binding protein MUW98_14735 PF04245 37-kD nucleoid-associated bacterial protein MUW98_14740 PF07208 Protein of unknown function (DUF1414) MUW98_14745 PF00884 Sulfatase MUW98_14745 PF11893 Domain of unknown function (DUF3413) MUW98_14750 PF07715 TonB-dependent Receptor Plug Domain MUW98_14750 PF00593 TonB dependent receptor MUW98_14755 PF00326 Prolyl oligopeptidase family MUW98_14755 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MUW98_14775 PF03974 Ecotin MUW98_14780 PF04219 Protein of unknown function, DUF MUW98_14785 PF03466 LysR substrate binding domain MUW98_14785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_14790 PF02153 Prephenate dehydrogenase MUW98_14790 PF01817 Chorismate mutase type II MUW98_14795 PF00793 DAHP synthetase I family MUW98_14800 PF03009 Glycerophosphoryl diester phosphodiesterase family MUW98_14805 PF01266 FAD dependent oxidoreductase MUW98_14805 PF16901 C-terminal domain of alpha-glycerophosphate oxidase MUW98_14815 PF00455 DeoR C terminal sensor domain MUW98_14815 PF08220 DeoR-like helix-turn-helix domain MUW98_14835 PF00230 Major intrinsic protein MUW98_14840 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MUW98_14840 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MUW98_14845 PF03466 LysR substrate binding domain MUW98_14845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_14870 PF00248 Aldo/keto reductase family MUW98_14875 PF07690 Major Facilitator Superfamily MUW98_14885 PF02322 Cytochrome bd terminal oxidase subunit II MUW98_14890 PF01654 Cytochrome bd terminal oxidase subunit I MUW98_14895 PF00155 Aminotransferase class I and II MUW98_14895 PF00392 Bacterial regulatory proteins, gntR family MUW98_14905 PF04391 Protein of unknown function (DUF533) MUW98_14920 PF10689 Protein of unknown function (DUF2496) MUW98_14930 PF07690 Major Facilitator Superfamily MUW98_14935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_14935 PF03466 LysR substrate binding domain MUW98_14945 PF07690 Major Facilitator Superfamily MUW98_14950 PF01479 S4 domain MUW98_14950 PF00849 RNA pseudouridylate synthase MUW98_14955 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MUW98_14955 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MUW98_14975 PF01844 HNH endonuclease MUW98_14980 PF00300 Histidine phosphatase superfamily (branch 1) MUW98_14990 PF03313 Serine dehydratase alpha chain MUW98_14995 PF01042 Endoribonuclease L-PSP MUW98_15005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_15005 PF00672 HAMP domain MUW98_15020 PF17810 Arginine decarboxylase helical bundle domain MUW98_15020 PF17944 Arginine decarboxylase C-terminal helical extension MUW98_15020 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MUW98_15030 PF01546 Peptidase family M20/M25/M40 MUW98_15030 PF07687 Peptidase dimerisation domain MUW98_15055 PF04264 YceI-like domain MUW98_15060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_15060 PF03466 LysR substrate binding domain MUW98_15070 PF01268 Formate--tetrahydrofolate ligase MUW98_15075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_15075 PF00672 HAMP domain MUW98_15075 PF17200 Single Cache domain 2 MUW98_15080 PF01227 GTP cyclohydrolase I MUW98_15085 PF00994 Probable molybdopterin binding domain MUW98_15085 PF03454 MoeA C-terminal region (domain IV) MUW98_15085 PF03453 MoeA N-terminal region (domain I and II) MUW98_15090 PF00899 ThiF family MUW98_15095 PF00561 alpha/beta hydrolase fold MUW98_15100 PF03459 TOBE domain MUW98_15100 PF00005 ABC transporter MUW98_15105 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_15115 PF02391 MoaE protein MUW98_15120 PF02597 ThiS family MUW98_15125 PF01967 MoaC family MUW98_15130 PF00994 Probable molybdopterin binding domain MUW98_15135 PF03264 NapC/NirT cytochrome c family, N-terminal region MUW98_15140 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) MUW98_15145 PF13237 4Fe-4S dicluster domain MUW98_15145 PF12801 4Fe-4S binding domain MUW98_15150 PF12800 4Fe-4S binding domain MUW98_15150 PF12838 4Fe-4S dicluster domain MUW98_15155 PF10518 TAT (twin-arginine translocation) pathway signal sequence MUW98_15155 PF01568 Molydopterin dinucleotide binding domain MUW98_15155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MUW98_15155 PF00384 Molybdopterin oxidoreductase MUW98_15165 PF13187 4Fe-4S dicluster domain MUW98_15165 PF12800 4Fe-4S binding domain MUW98_15165 PF00037 4Fe-4S binding domain MUW98_15170 PF04055 Radical SAM superfamily MUW98_15170 PF06463 Molybdenum Cofactor Synthesis C MUW98_15175 PF00672 HAMP domain MUW98_15175 PF07730 Histidine kinase MUW98_15175 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term MUW98_15175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_15180 PF00196 Bacterial regulatory proteins, luxR family MUW98_15180 PF00072 Response regulator receiver domain MUW98_15190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_15190 PF00512 His Kinase A (phospho-acceptor) domain MUW98_15190 PF17149 Periplasmic sensor domain found in signal transduction proteins MUW98_15190 PF00672 HAMP domain MUW98_15190 PF00072 Response regulator receiver domain MUW98_15190 PF01627 Hpt domain MUW98_15200 PF01933 Uncharacterised protein family UPF0052 MUW98_15210 PF13230 Glutamine amidotransferases class-II MUW98_15215 PF13580 SIS domain MUW98_15220 PF09317 Domain of unknown function (DUF1974) MUW98_15220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MUW98_15220 PF02770 Acyl-CoA dehydrogenase, middle domain MUW98_15220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MUW98_15225 PF11849 Domain of unknown function (DUF3369) MUW98_15235 PF00929 Exonuclease MUW98_15240 PF00075 RNase H MUW98_15245 PF08241 Methyltransferase domain MUW98_15250 PF00753 Metallo-beta-lactamase superfamily MUW98_15250 PF16123 Hydroxyacylglutathione hydrolase C-terminus MUW98_15255 PF01476 LysM domain MUW98_15255 PF01464 Transglycosylase SLT domain MUW98_15260 PF03372 Endonuclease/Exonuclease/phosphatase family MUW98_15270 PF03061 Thioesterase superfamily MUW98_15280 PF00356 Bacterial regulatory proteins, lacI family MUW98_15285 PF01464 Transglycosylase SLT domain MUW98_15285 PF14718 Soluble lytic murein transglycosylase L domain MUW98_15290 PF00563 EAL domain MUW98_15290 PF00990 Diguanylate cyclase, GGDEF domain MUW98_15290 PF03707 Bacterial signalling protein N terminal repeat MUW98_15295 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MUW98_15315 PF04357 TamB, inner membrane protein subunit of TAM complex MUW98_15320 PF01103 Surface antigen MUW98_15320 PF07244 Surface antigen variable number repeat MUW98_15320 PF17243 POTRA domain TamA domain 1 MUW98_15335 PF01625 Peptide methionine sulfoxide reductase MUW98_15345 PF02627 Carboxymuconolactone decarboxylase family MUW98_15350 PF00403 Heavy-metal-associated domain MUW98_15350 PF07992 Pyridine nucleotide-disulphide oxidoreductase MUW98_15350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MUW98_15355 PF13416 Bacterial extracellular solute-binding protein MUW98_15365 PF00005 ABC transporter MUW98_15370 PF01066 CDP-alcohol phosphatidyltransferase MUW98_15375 PF13406 Transglycosylase SLT domain MUW98_15390 PF01047 MarR family MUW98_15400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MUW98_15400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MUW98_15400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MUW98_15400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MUW98_15405 PF17206 SeqA protein N-terminal domain MUW98_15405 PF03925 SeqA protein C-terminal domain MUW98_15410 PF12697 Alpha/beta hydrolase family MUW98_15420 PF01402 Ribbon-helix-helix protein, copG family MUW98_15425 PF00258 Flavodoxin MUW98_15435 PF01475 Ferric uptake regulator family MUW98_15440 PF00749 tRNA synthetases class I (E and Q), catalytic domain MUW98_15440 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain MUW98_15445 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain MUW98_15445 PF00728 Glycosyl hydrolase family 20, catalytic domain MUW98_15445 PF03173 Putative carbohydrate binding domain MUW98_15445 PF02838 Glycosyl hydrolase family 20, domain 2 MUW98_15450 PF02378 Phosphotransferase system, EIIC MUW98_15450 PF00367 phosphotransferase system, EIIB MUW98_15450 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MUW98_15455 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MUW98_15460 PF01979 Amidohydrolase family MUW98_15465 PF01047 MarR family MUW98_15465 PF00480 ROK family MUW98_15470 PF00884 Sulfatase MUW98_15470 PF08019 Phosphoethanolamine transferase EptA/EptB MUW98_15475 PF01709 Transcriptional regulator MUW98_15480 PF00152 tRNA synthetases class II (D, K and N) MUW98_15480 PF02938 GAD domain MUW98_15480 PF01336 OB-fold nucleic acid binding domain MUW98_15485 PF01904 Protein of unknown function DUF72 MUW98_15490 PF13649 Methyltransferase domain MUW98_15495 PF08003 Protein of unknown function (DUF1698) MUW98_15515 PF10417 C-terminal domain of 1-Cys peroxiredoxin MUW98_15515 PF00578 AhpC/TSA family MUW98_15520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_15520 PF03466 LysR substrate binding domain MUW98_15530 PF00665 Integrase core domain MUW98_15535 PF01695 IstB-like ATP binding protein MUW98_15545 PF00877 NlpC/P60 family MUW98_15555 PF00171 Aldehyde dehydrogenase family MUW98_15560 PF00440 Bacterial regulatory proteins, tetR family MUW98_15560 PF08359 YsiA-like protein, C-terminal region MUW98_15570 PF00465 Iron-containing alcohol dehydrogenase MUW98_15580 PF00291 Pyridoxal-phosphate dependent enzyme MUW98_15600 PF01554 MatE MUW98_15620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MUW98_15620 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MUW98_15620 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase MUW98_15620 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MUW98_15620 PF10371 Domain of unknown function MUW98_15625 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MUW98_15625 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MUW98_15625 PF07992 Pyridine nucleotide-disulphide oxidoreductase MUW98_15630 PF03476 MOSC N-terminal beta barrel domain MUW98_15630 PF03473 MOSC domain MUW98_15630 PF00111 2Fe-2S iron-sulfur cluster binding domain MUW98_15630 PF03476 MOSC N-terminal beta barrel domain MUW98_15630 PF03473 MOSC domain MUW98_15630 PF00111 2Fe-2S iron-sulfur cluster binding domain MUW98_15635 PF13426 PAS domain MUW98_15635 PF08447 PAS fold MUW98_15635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_15640 PF01435 Peptidase family M48 MUW98_15650 PF12697 Alpha/beta hydrolase family MUW98_15650 PF08241 Methyltransferase domain MUW98_15655 PF00155 Aminotransferase class I and II MUW98_15660 PF06968 Biotin and Thiamin Synthesis associated domain MUW98_15660 PF04055 Radical SAM superfamily MUW98_15665 PF00202 Aminotransferase class-III MUW98_15680 PF00152 tRNA synthetases class II (D, K and N) MUW98_15680 PF01336 OB-fold nucleic acid binding domain MUW98_15685 PF03605 Anaerobic c4-dicarboxylate membrane transporter MUW98_15695 PF07687 Peptidase dimerisation domain MUW98_15695 PF01546 Peptidase family M20/M25/M40 MUW98_15700 PF03606 C4-dicarboxylate anaerobic carrier MUW98_15710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_15710 PF03466 LysR substrate binding domain MUW98_15715 PF03960 ArsC family MUW98_15720 PF01546 Peptidase family M20/M25/M40 MUW98_15720 PF07687 Peptidase dimerisation domain MUW98_15725 PF02557 D-alanyl-D-alanine carboxypeptidase MUW98_15735 PF02080 TrkA-C domain MUW98_15735 PF00999 Sodium/hydrogen exchanger family MUW98_15735 PF03471 Transporter associated domain MUW98_15745 PF02080 TrkA-C domain MUW98_15745 PF00999 Sodium/hydrogen exchanger family MUW98_15745 PF03471 Transporter associated domain MUW98_15755 PF01810 LysE type translocator MUW98_15760 PF00672 HAMP domain MUW98_15760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_15765 PF07509 Protein of unknown function (DUF1523) MUW98_15780 PF01156 Inosine-uridine preferring nucleoside hydrolase MUW98_15785 PF00849 RNA pseudouridylate synthase MUW98_15790 PF01048 Phosphorylase superfamily MUW98_15795 PF00465 Iron-containing alcohol dehydrogenase MUW98_15800 PF04355 SmpA / OmlA family MUW98_15805 PF13460 NAD(P)H-binding MUW98_15810 PF03658 RnfH family Ubiquitin MUW98_15815 PF03364 Polyketide cyclase / dehydrase and lipid transport MUW98_15820 PF01668 SmpB protein MUW98_15830 PF00589 Phage integrase family MUW98_15830 PF13356 Arm DNA-binding domain MUW98_15835 PF00816 H-NS histone family MUW98_15845 PF00872 Transposase, Mutator family MUW98_15850 PF13148 Protein of unknown function (DUF3987) MUW98_15870 PF05973 Phage derived protein Gp49-like (DUF891) MUW98_15875 PF01381 Helix-turn-helix MUW98_15880 PF09588 YqaJ-like viral recombinase domain MUW98_15925 PF04002 RadC-like JAB domain MUW98_15930 PF00271 Helicase conserved C-terminal domain MUW98_15930 PF00176 SNF2 family N-terminal domain MUW98_15930 PF12419 SNF2 Helicase protein MUW98_15955 PF11867 Domain of unknown function (DUF3387) MUW98_15955 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) MUW98_15955 PF18766 SWI2/SNF2 ATPase MUW98_15975 PF12161 HsdM N-terminal domain MUW98_15975 PF02384 N-6 DNA Methylase MUW98_15990 PF00717 Peptidase S24-like MUW98_15995 PF11798 IMS family HHH motif MUW98_15995 PF00817 impB/mucB/samB family MUW98_15995 PF13438 Domain of unknown function (DUF4113) MUW98_15995 PF11799 impB/mucB/samB family C-terminal domain MUW98_16010 PF00270 DEAD/DEAH box helicase MUW98_16010 PF00271 Helicase conserved C-terminal domain MUW98_16015 PF00480 ROK family MUW98_16020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_16020 PF03466 LysR substrate binding domain MUW98_16030 PF00291 Pyridoxal-phosphate dependent enzyme MUW98_16040 PF00180 Isocitrate/isopropylmalate dehydrogenase MUW98_16045 PF12833 Helix-turn-helix domain MUW98_16050 PF01238 Phosphomannose isomerase type I MUW98_16075 PF00155 Aminotransferase class I and II MUW98_16080 PF00367 phosphotransferase system, EIIB MUW98_16080 PF02378 Phosphotransferase system, EIIC MUW98_16085 PF00356 Bacterial regulatory proteins, lacI family MUW98_16085 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MUW98_16090 PF07992 Pyridine nucleotide-disulphide oxidoreductase MUW98_16090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MUW98_16095 PF13411 MerR HTH family regulatory protein MUW98_16100 PF01695 IstB-like ATP binding protein MUW98_16105 PF00665 Integrase core domain MUW98_16135 PF02378 Phosphotransferase system, EIIC MUW98_16135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MUW98_16135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MUW98_16140 PF07690 Major Facilitator Superfamily MUW98_16145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MUW98_16155 PF00849 RNA pseudouridylate synthase MUW98_16160 PF00293 NUDIX domain MUW98_16170 PF04356 Protein of unknown function (DUF489) MUW98_16175 PF08328 Adenylosuccinate lyase C-terminal MUW98_16175 PF00206 Lyase MUW98_16180 PF08007 Cupin superfamily protein MUW98_16190 PF13508 Acetyltransferase (GNAT) domain MUW98_16200 PF02798 Glutathione S-transferase, N-terminal domain MUW98_16205 PF01243 Pyridoxamine 5'-phosphate oxidase MUW98_16205 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MUW98_16220 PF01189 16S rRNA methyltransferase RsmB/F MUW98_16220 PF01029 NusB family MUW98_16225 PF00462 Glutaredoxin MUW98_16230 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MUW98_16230 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MUW98_16235 PF04333 MlaA lipoprotein MUW98_16240 PF03918 Cytochrome C biogenesis protein MUW98_16245 PF03918 Cytochrome C biogenesis protein MUW98_16250 PF08534 Redoxin MUW98_16255 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal MUW98_16255 PF01578 Cytochrome C assembly protein MUW98_16260 PF03100 CcmE MUW98_16265 PF04995 Heme exporter protein D (CcmD) MUW98_16270 PF01578 Cytochrome C assembly protein MUW98_16275 PF03379 CcmB protein MUW98_16280 PF00005 ABC transporter MUW98_16290 PF01584 CheW-like domain MUW98_16300 PF13614 AAA domain MUW98_16305 PF13677 Membrane MotB of proton-channel complex MotA/MotB MUW98_16305 PF00691 OmpA family MUW98_16310 PF01618 MotA/TolQ/ExbB proton channel family MUW98_16315 PF00072 Response regulator receiver domain MUW98_16315 PF01339 CheB methylesterase MUW98_16320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_16320 PF02895 Signal transducing histidine kinase, homodimeric domain MUW98_16320 PF01584 CheW-like domain MUW98_16320 PF01627 Hpt domain MUW98_16320 PF00072 Response regulator receiver domain MUW98_16325 PF04344 Chemotaxis phosphatase, CheZ MUW98_16330 PF00072 Response regulator receiver domain MUW98_16335 PF04545 Sigma-70, region 4 MUW98_16335 PF04542 Sigma-70 region 2 MUW98_16335 PF04539 Sigma-70 region 3 MUW98_16340 PF10609 NUBPL iron-transfer P-loop NTPase MUW98_16345 PF00448 SRP54-type protein, GTPase domain MUW98_16350 PF00771 FHIPEP family MUW98_16355 PF01312 FlhB HrpN YscU SpaS Family MUW98_16360 PF01311 Bacterial export proteins, family 1 MUW98_16365 PF01313 Bacterial export proteins, family 3 MUW98_16370 PF00813 FliP family MUW98_16375 PF04347 Flagellar biosynthesis protein, FliO MUW98_16380 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MUW98_16385 PF02154 Flagellar motor switch protein FliM MUW98_16385 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MUW98_16405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MUW98_16405 PF18269 T3SS EscN ATPase C-terminal domain MUW98_16415 PF14841 FliG middle domain MUW98_16415 PF14842 FliG N-terminal domain MUW98_16415 PF01706 FliG C-terminal domain MUW98_16420 PF01514 Secretory protein of YscJ/FliF family MUW98_16420 PF08345 Flagellar M-ring protein C-terminal MUW98_16425 PF02049 Flagellar hook-basal body complex protein FliE MUW98_16435 PF00072 Response regulator receiver domain MUW98_16440 PF04055 Radical SAM superfamily MUW98_16440 PF18693 TRAM domain MUW98_16440 PF00919 Uncharacterized protein family UPF0004 MUW98_16450 PF12146 Serine aminopeptidase, S33 MUW98_16450 PF16671 Actin cross-linking domain MUW98_16450 PF07634 RtxA repeat MUW98_16450 PF11713 Peptidase C80 family MUW98_16450 PF11647 Membrane Localization Domain MUW98_16455 PF02794 RTX toxin acyltransferase family MUW98_16465 PF00664 ABC transporter transmembrane region MUW98_16465 PF03412 Peptidase C39 family MUW98_16465 PF00005 ABC transporter MUW98_16475 PF03412 Peptidase C39 family MUW98_16475 PF00005 ABC transporter MUW98_16475 PF00664 ABC transporter transmembrane region MUW98_16480 PF00072 Response regulator receiver domain MUW98_16480 PF00486 Transcriptional regulatory protein, C terminal MUW98_16485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_16490 PF02685 Glucokinase MUW98_16495 PF01380 SIS domain MUW98_16495 PF01418 Helix-turn-helix domain, rpiR family MUW98_16500 PF00224 Pyruvate kinase, barrel domain MUW98_16500 PF02887 Pyruvate kinase, alpha/beta domain MUW98_16510 PF00873 AcrB/AcrD/AcrF family MUW98_16515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MUW98_16515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MUW98_16515 PF02770 Acyl-CoA dehydrogenase, middle domain MUW98_16515 PF09317 Domain of unknown function (DUF1974) MUW98_16520 PF00440 Bacterial regulatory proteins, tetR family MUW98_16535 PF11799 impB/mucB/samB family C-terminal domain MUW98_16535 PF11798 IMS family HHH motif MUW98_16535 PF00817 impB/mucB/samB family MUW98_16535 PF13438 Domain of unknown function (DUF4113) MUW98_16540 PF00717 Peptidase S24-like MUW98_16555 PF18766 SWI2/SNF2 ATPase MUW98_16555 PF11867 Domain of unknown function (DUF3387) MUW98_16555 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) MUW98_16565 PF07728 AAA domain (dynein-related subfamily) MUW98_16565 PF12102 Domain of unknown function (DUF3578) MUW98_16570 PF01420 Type I restriction modification DNA specificity domain MUW98_16575 PF02384 N-6 DNA Methylase MUW98_16580 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A MUW98_16625 PF04002 RadC-like JAB domain MUW98_16670 PF09588 YqaJ-like viral recombinase domain MUW98_16690 PF13148 Protein of unknown function (DUF3987) MUW98_16740 PF13411 MerR HTH family regulatory protein MUW98_16745 PF00816 H-NS histone family MUW98_16770 PF01695 IstB-like ATP binding protein MUW98_16775 PF00665 Integrase core domain MUW98_16790 PF00384 Molybdopterin oxidoreductase MUW98_16795 PF02634 FdhD/NarQ family MUW98_16800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_16800 PF03466 LysR substrate binding domain MUW98_16825 PF00936 BMC domain MUW98_16830 PF00936 BMC domain MUW98_16835 PF00936 BMC domain MUW98_16840 PF00465 Iron-containing alcohol dehydrogenase MUW98_16840 PF00171 Aldehyde dehydrogenase family MUW98_16850 PF00465 Iron-containing alcohol dehydrogenase MUW98_16850 PF00171 Aldehyde dehydrogenase family MUW98_16855 PF01228 Glycine radical MUW98_16855 PF02901 Pyruvate formate lyase-like MUW98_16860 PF04055 Radical SAM superfamily MUW98_16860 PF13187 4Fe-4S dicluster domain MUW98_16865 PF00936 BMC domain MUW98_16870 PF06130 Phosphate propanoyltransferase MUW98_16880 PF00893 Small Multidrug Resistance protein MUW98_16885 PF00893 Small Multidrug Resistance protein MUW98_16890 PF00672 HAMP domain MUW98_16890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_16890 PF00512 His Kinase A (phospho-acceptor) domain MUW98_16890 PF13426 PAS domain MUW98_16895 PF00072 Response regulator receiver domain MUW98_16895 PF00486 Transcriptional regulatory protein, C terminal MUW98_16900 PF00529 HlyD membrane-fusion protein of T1SS MUW98_16900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MUW98_16905 PF00873 AcrB/AcrD/AcrF family MUW98_16915 PF01476 LysM domain MUW98_16915 PF17969 L,D-transpeptidase C-terminal domain MUW98_16915 PF03734 L,D-transpeptidase catalytic domain MUW98_16925 PF01575 MaoC like domain MUW98_16930 PF05971 RNA methyltransferase MUW98_16935 PF00877 NlpC/P60 family MUW98_16940 PF01648 4'-phosphopantetheinyl transferase superfamily MUW98_16945 PF00085 Thioredoxin MUW98_16955 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MUW98_16960 PF00551 Formyl transferase MUW98_16960 PF01842 ACT domain MUW98_16970 PF13396 Phospholipase_D-nuclease N-terminal MUW98_16970 PF13091 PLD-like domain MUW98_16985 PF01551 Peptidase family M23 MUW98_16990 PF00128 Alpha amylase, catalytic domain MUW98_16995 PF01551 Peptidase family M23 MUW98_16995 PF10145 Phage-related minor tail protein MUW98_16995 PF01464 Transglycosylase SLT domain MUW98_17000 PF00230 Major intrinsic protein MUW98_17005 PF02075 Crossover junction endodeoxyribonuclease RuvC MUW98_17010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MUW98_17030 PF05656 Protein of unknown function (DUF805) MUW98_17035 PF12833 Helix-turn-helix domain MUW98_17050 PF08497 Radical SAM N-terminal MUW98_17050 PF11842 Domain of unknown function (DUF3362) MUW98_17050 PF04055 Radical SAM superfamily MUW98_17060 PF00873 AcrB/AcrD/AcrF family MUW98_17065 PF00529 HlyD membrane-fusion protein of T1SS MUW98_17065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MUW98_17070 PF00990 Diguanylate cyclase, GGDEF domain MUW98_17075 PF01734 Patatin-like phospholipase MUW98_17080 PF00209 Sodium:neurotransmitter symporter family MUW98_17095 PF01389 OmpA-like transmembrane domain MUW98_17095 PF00691 OmpA family MUW98_17100 PF00691 OmpA family MUW98_17100 PF01389 OmpA-like transmembrane domain MUW98_17105 PF01389 OmpA-like transmembrane domain MUW98_17105 PF00691 OmpA family MUW98_17110 PF00390 Malic enzyme, N-terminal domain MUW98_17110 PF03949 Malic enzyme, NAD binding domain MUW98_17115 PF12833 Helix-turn-helix domain MUW98_17120 PF01554 MatE MUW98_17125 PF10692 Protein of unknown function (DUF2498) MUW98_17130 PF00072 Response regulator receiver domain MUW98_17130 PF00990 Diguanylate cyclase, GGDEF domain MUW98_17135 PF00860 Permease family MUW98_17145 PF01235 Sodium:alanine symporter family MUW98_17150 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MUW98_17150 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MUW98_17155 PF01699 Sodium/calcium exchanger protein MUW98_17160 PF08534 Redoxin MUW98_17170 PF00293 NUDIX domain MUW98_17190 PF00005 ABC transporter MUW98_17195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MUW98_17195 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MUW98_17205 PF03932 CutC family MUW98_17210 PF00480 ROK family MUW98_17220 PF01435 Peptidase family M48 MUW98_17225 PF12849 PBP superfamily domain MUW98_17230 PF00512 His Kinase A (phospho-acceptor) domain MUW98_17230 PF00989 PAS fold MUW98_17230 PF11808 Phosphate regulon sensor protein PhoR MUW98_17230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_17235 PF00072 Response regulator receiver domain MUW98_17235 PF00486 Transcriptional regulatory protein, C terminal MUW98_17240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MUW98_17245 PF02515 CoA-transferase family III MUW98_17250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MUW98_17250 PF02770 Acyl-CoA dehydrogenase, middle domain MUW98_17250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MUW98_17255 PF02954 Bacterial regulatory protein, Fis family MUW98_17255 PF00158 Sigma-54 interaction domain MUW98_17255 PF01590 GAF domain MUW98_17260 PF00171 Aldehyde dehydrogenase family MUW98_17270 PF00892 EamA-like transporter family MUW98_17275 PF12431 Transcriptional regulator MUW98_17275 PF00072 Response regulator receiver domain MUW98_17280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_17280 PF00989 PAS fold MUW98_17280 PF17203 Single cache domain 3 MUW98_17280 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain MUW98_17285 PF00390 Malic enzyme, N-terminal domain MUW98_17285 PF03949 Malic enzyme, NAD binding domain MUW98_17290 PF03390 2-hydroxycarboxylate transporter family MUW98_17300 PF01047 MarR family MUW98_17305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MUW98_17305 PF00529 HlyD membrane-fusion protein of T1SS MUW98_17330 PF01679 Proteolipid membrane potential modulator MUW98_17340 PF13597 Anaerobic ribonucleoside-triphosphate reductase MUW98_17340 PF03477 ATP cone domain MUW98_17350 PF03120 NAD-dependent DNA ligase OB-fold domain MUW98_17350 PF01653 NAD-dependent DNA ligase adenylation domain MUW98_17350 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MUW98_17350 PF00533 BRCA1 C Terminus (BRCT) domain MUW98_17350 PF12826 Helix-hairpin-helix motif MUW98_17355 PF04354 ZipA, C-terminal FtsZ-binding domain MUW98_17360 PF06470 SMC proteins Flexible Hinge Domain MUW98_17360 PF02463 RecF/RecN/SMC N terminal domain MUW98_17370 PF03458 UPF0126 domain MUW98_17380 PF05951 Bacterial protein of unknown function (DUF882) MUW98_17385 PF01471 Putative peptidoglycan binding domain MUW98_17385 PF03734 L,D-transpeptidase catalytic domain MUW98_17400 PF00535 Glycosyl transferase family 2 MUW98_17415 PF00128 Alpha amylase, catalytic domain MUW98_17425 PF00072 Response regulator receiver domain MUW98_17425 PF00196 Bacterial regulatory proteins, luxR family MUW98_17445 PF02080 TrkA-C domain MUW98_17445 PF00999 Sodium/hydrogen exchanger family MUW98_17445 PF02254 TrkA-N domain MUW98_17450 PF00990 Diguanylate cyclase, GGDEF domain MUW98_17455 PF11734 TilS substrate C-terminal domain MUW98_17455 PF01171 PP-loop family MUW98_17455 PF09179 TilS substrate binding domain MUW98_17460 PF05649 Peptidase family M13 MUW98_17460 PF01431 Peptidase family M13 MUW98_17470 PF00005 ABC transporter MUW98_17470 PF16326 ABC transporter C-terminal domain MUW98_17470 PF12848 ABC transporter MUW98_17475 PF13302 Acetyltransferase (GNAT) domain MUW98_17480 PF13520 Amino acid permease MUW98_17485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_17485 PF03466 LysR substrate binding domain MUW98_17490 PF12146 Serine aminopeptidase, S33 MUW98_17495 PF12146 Serine aminopeptidase, S33 MUW98_17500 PF03466 LysR substrate binding domain MUW98_17500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_17505 PF12706 Beta-lactamase superfamily domain MUW98_17515 PF03466 LysR substrate binding domain MUW98_17515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_17525 PF08543 Phosphomethylpyrimidine kinase MUW98_17530 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain MUW98_17530 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain MUW98_17530 PF01276 Orn/Lys/Arg decarboxylase, major domain MUW98_17535 PF13520 Amino acid permease MUW98_17540 PF00486 Transcriptional regulatory protein, C terminal MUW98_17540 PF18500 CadC C-terminal domain 1 MUW98_17545 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MUW98_17550 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MUW98_17550 PF02811 PHP domain MUW98_17550 PF01336 OB-fold nucleic acid binding domain MUW98_17550 PF07733 Bacterial DNA polymerase III alpha NTPase domain MUW98_17550 PF14579 Helix-hairpin-helix motif MUW98_17555 PF01351 Ribonuclease HII MUW98_17560 PF02684 Lipid-A-disaccharide synthetase MUW98_17565 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MUW98_17565 PF00132 Bacterial transferase hexapeptide (six repeats) MUW98_17570 PF07977 FabA-like domain MUW98_17575 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD MUW98_17575 PF00132 Bacterial transferase hexapeptide (six repeats) MUW98_17580 PF03938 Outer membrane protein (OmpH-like) MUW98_17585 PF07244 Surface antigen variable number repeat MUW98_17585 PF01103 Surface antigen MUW98_17590 PF02163 Peptidase family M50 MUW98_17590 PF17820 PDZ domain MUW98_17595 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase MUW98_17595 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MUW98_17595 PF13288 DXP reductoisomerase C-terminal domain MUW98_17605 PF01255 Putative undecaprenyl diphosphate synthase MUW98_17610 PF01765 Ribosome recycling factor MUW98_17615 PF00696 Amino acid kinase family MUW98_17620 PF00889 Elongation factor TS MUW98_17625 PF00318 Ribosomal protein S2 MUW98_17630 PF00557 Metallopeptidase family M24 MUW98_17635 PF01966 HD domain MUW98_17635 PF08335 GlnD PII-uridylyltransferase MUW98_17635 PF01909 Nucleotidyltransferase domain MUW98_17635 PF01842 ACT domain MUW98_17640 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal MUW98_17640 PF14602 Hexapeptide repeat of succinyl-transferase MUW98_17640 PF00132 Bacterial transferase hexapeptide (six repeats) MUW98_17645 PF11944 Protein of unknown function (DUF3461) MUW98_17650 PF02378 Phosphotransferase system, EIIC MUW98_17650 PF00367 phosphotransferase system, EIIB MUW98_17655 PF07148 Maltose operon periplasmic protein precursor (MalM) MUW98_17660 PF02264 LamB porin MUW98_17665 PF00258 Flavodoxin MUW98_17670 PF00849 RNA pseudouridylate synthase MUW98_17675 PF04287 tRNA pseudouridine synthase C MUW98_17700 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) MUW98_17705 PF07348 Syd protein (SUKH-2) MUW98_17710 PF14489 QueF-like protein MUW98_17710 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term MUW98_17720 PF00990 Diguanylate cyclase, GGDEF domain MUW98_17725 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases MUW98_17725 PF03641 Possible lysine decarboxylase MUW98_17725 PF11892 Domain of unknown function (DUF3412) MUW98_17730 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MUW98_17730 PF01367 5'-3' exonuclease, C-terminal SAM fold MUW98_17735 PF18324 Hypothetical protein TT1725 MUW98_17735 PF00180 Isocitrate/isopropylmalate dehydrogenase MUW98_17745 PF01728 FtsJ-like methyltransferase MUW98_17745 PF18125 RlmM ferredoxin-like domain MUW98_17750 PF04241 Protein of unknown function (DUF423) MUW98_17760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_17760 PF03466 LysR substrate binding domain MUW98_17765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_17765 PF00672 HAMP domain MUW98_17770 PF11799 impB/mucB/samB family C-terminal domain MUW98_17770 PF00817 impB/mucB/samB family MUW98_17770 PF11798 IMS family HHH motif MUW98_17785 PF02424 ApbE family MUW98_17790 PF00970 Oxidoreductase FAD-binding domain MUW98_17790 PF00111 2Fe-2S iron-sulfur cluster binding domain MUW98_17790 PF00175 Oxidoreductase NAD-binding domain MUW98_17795 PF02508 Rnf-Nqr subunit, membrane protein MUW98_17800 PF02508 Rnf-Nqr subunit, membrane protein MUW98_17805 PF04205 FMN-binding domain MUW98_17810 PF03116 NQR2, RnfD, RnfE family MUW98_17815 PF11973 NQRA C-terminal domain MUW98_17815 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) MUW98_17820 PF01722 BolA-like protein MUW98_17825 PF05175 Methyltransferase small domain MUW98_17835 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MUW98_17845 PF07690 Major Facilitator Superfamily MUW98_17850 PF03502 Nucleoside-specific channel-forming protein, Tsx MUW98_17855 PF04461 Protein of unknown function (DUF520) MUW98_17860 PF02558 Ketopantoate reductase PanE/ApbA MUW98_17860 PF08546 Ketopantoate reductase PanE/ApbA C terminal MUW98_17865 PF01965 DJ-1/PfpI family MUW98_17870 PF00205 Thiamine pyrophosphate enzyme, central domain MUW98_17870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MUW98_17870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MUW98_17875 PF03306 Alpha-acetolactate decarboxylase MUW98_17880 PF03466 LysR substrate binding domain MUW98_17880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_17910 PF04717 Type VI secretion system, phage-baseplate injector MUW98_17920 PF05638 Type VI secretion system effector, Hcp MUW98_17925 PF03472 Autoinducer binding domain MUW98_17925 PF00196 Bacterial regulatory proteins, luxR family MUW98_17935 PF06965 Na+/H+ antiporter 1 MUW98_17935 PF13462 Thioredoxin MUW98_17940 PF16363 GDP-mannose 4,6 dehydratase MUW98_17945 PF00042 Globin MUW98_17945 PF00175 Oxidoreductase NAD-binding domain MUW98_17945 PF00970 Oxidoreductase FAD-binding domain MUW98_17950 PF03063 Prismane/CO dehydrogenase family MUW98_17955 PF00210 Ferritin-like domain MUW98_17995 PF00106 short chain dehydrogenase MUW98_18005 PF00875 DNA photolyase MUW98_18005 PF03441 FAD binding domain of DNA photolyase MUW98_18010 PF13411 MerR HTH family regulatory protein MUW98_18015 PF08349 Protein of unknown function (DUF1722) MUW98_18045 PF01817 Chorismate mutase type II MUW98_18045 PF00800 Prephenate dehydratase MUW98_18080 PF02743 Cache domain MUW98_18080 PF00672 HAMP domain MUW98_18080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_18085 PF03573 outer membrane porin, OprD family MUW98_18090 PF00106 short chain dehydrogenase MUW98_18115 PF02074 Carboxypeptidase Taq (M32) metallopeptidase MUW98_18125 PF00730 HhH-GPD superfamily base excision DNA repair protein MUW98_18125 PF02805 Metal binding domain of Ada MUW98_18125 PF06029 AlkA N-terminal domain MUW98_18125 PF12833 Helix-turn-helix domain MUW98_18130 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MUW98_18130 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MUW98_18140 PF12392 Collagenase MUW98_18140 PF01136 Peptidase family U32 MUW98_18145 PF01810 LysE type translocator MUW98_18150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_18150 PF03466 LysR substrate binding domain MUW98_18155 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MUW98_18155 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MUW98_18160 PF02743 Cache domain MUW98_18160 PF00672 HAMP domain MUW98_18160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_18165 PF00072 Response regulator receiver domain MUW98_18175 PF01627 Hpt domain MUW98_18175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_18175 PF02895 Signal transducing histidine kinase, homodimeric domain MUW98_18175 PF01584 CheW-like domain MUW98_18175 PF07194 P2 response regulator binding domain MUW98_18180 PF00672 HAMP domain MUW98_18180 PF12729 Four helix bundle sensory module for signal transduction MUW98_18180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_18185 PF01584 CheW-like domain MUW98_18190 PF00672 HAMP domain MUW98_18190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_18190 PF02203 Tar ligand binding domain homologue MUW98_18195 PF01739 CheR methyltransferase, SAM binding domain MUW98_18195 PF03705 CheR methyltransferase, all-alpha domain MUW98_18200 PF03975 CheD chemotactic sensory transduction MUW98_18205 PF01339 CheB methylesterase MUW98_18205 PF00072 Response regulator receiver domain MUW98_18210 PF00266 Aminotransferase class-V MUW98_18235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_18235 PF01627 Hpt domain MUW98_18235 PF00072 Response regulator receiver domain MUW98_18235 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MUW98_18235 PF00672 HAMP domain MUW98_18235 PF00512 His Kinase A (phospho-acceptor) domain MUW98_18240 PF00196 Bacterial regulatory proteins, luxR family MUW98_18240 PF00072 Response regulator receiver domain MUW98_18250 PF16967 E-set like domain MUW98_18250 PF15976 CS1-pili formation C-terminal MUW98_18270 PF00990 Diguanylate cyclase, GGDEF domain MUW98_18270 PF00989 PAS fold MUW98_18270 PF00563 EAL domain MUW98_18270 PF01590 GAF domain MUW98_18275 PF01136 Peptidase family U32 MUW98_18275 PF16325 Peptidase family U32 C-terminal domain MUW98_18280 PF12838 4Fe-4S dicluster domain MUW98_18290 PF01168 Alanine racemase, N-terminal domain MUW98_18290 PF00842 Alanine racemase, C-terminal domain MUW98_18295 PF00772 DnaB-like helicase N terminal domain MUW98_18295 PF03796 DnaB-like helicase C terminal domain MUW98_18305 PF00563 EAL domain MUW98_18305 PF12792 CSS motif domain associated with EAL MUW98_18310 PF02872 5'-nucleotidase, C-terminal domain MUW98_18310 PF00149 Calcineurin-like phosphoesterase MUW98_18330 PF02954 Bacterial regulatory protein, Fis family MUW98_18330 PF00072 Response regulator receiver domain MUW98_18330 PF00158 Sigma-54 interaction domain MUW98_18335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MUW98_18335 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MUW98_18345 PF04102 SlyX MUW98_18350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MUW98_18355 PF09526 Probable metal-binding protein (DUF2387) MUW98_18365 PF00072 Response regulator receiver domain MUW98_18365 PF01584 CheW-like domain MUW98_18370 PF00561 alpha/beta hydrolase fold MUW98_18375 PF00563 EAL domain MUW98_18375 PF01590 GAF domain MUW98_18375 PF00990 Diguanylate cyclase, GGDEF domain MUW98_18375 PF00360 Phytochrome region MUW98_18380 PF06794 Uncharacterised protein family (UPF0270) MUW98_18385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MUW98_18385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MUW98_18385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MUW98_18390 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MUW98_18395 PF00535 Glycosyl transferase family 2 MUW98_18400 PF01370 NAD dependent epimerase/dehydratase family MUW98_18400 PF00551 Formyl transferase MUW98_18400 PF02911 Formyl transferase, C-terminal domain MUW98_18405 PF01522 Polysaccharide deacetylase MUW98_18410 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase MUW98_18415 PF00892 EamA-like transporter family MUW98_18420 PF00893 Small Multidrug Resistance protein MUW98_18425 PF00485 Phosphoribulokinase / Uridine kinase family MUW98_18440 PF02566 OsmC-like protein MUW98_18445 PF00027 Cyclic nucleotide-binding domain MUW98_18445 PF13545 Crp-like helix-turn-helix domain MUW98_18450 PF13847 Methyltransferase domain MUW98_18455 PF18416 N-acetylglucosamine binding protein domain 2 MUW98_18455 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading MUW98_18460 PF12561 ToxR activated gene A lipoprotein domain MUW98_18460 PF17945 Beta/Gamma crystallin MUW98_18465 PF00704 Glycosyl hydrolases family 18 MUW98_18465 PF08329 Chitinase A, N-terminal domain MUW98_18470 PF00512 His Kinase A (phospho-acceptor) domain MUW98_18470 PF00989 PAS fold MUW98_18470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_18480 PF13443 Cro/C1-type HTH DNA-binding domain MUW98_18485 PF12832 MFS_1 like family MUW98_18490 PF07715 TonB-dependent Receptor Plug Domain MUW98_18490 PF00593 TonB dependent receptor MUW98_18510 PF01243 Pyridoxamine 5'-phosphate oxidase MUW98_18515 PF06228 Haem utilisation ChuX/HutX MUW98_18525 PF01032 FecCD transport family MUW98_18530 PF00005 ABC transporter MUW98_18540 PF01370 NAD dependent epimerase/dehydratase family MUW98_18550 PF01791 DeoC/LacD family aldolase MUW98_18555 PF07670 Nucleoside recognition MUW98_18555 PF07662 Na+ dependent nucleoside transporter C-terminus MUW98_18555 PF01773 Na+ dependent nucleoside transporter N-terminus MUW98_18560 PF01048 Phosphorylase superfamily MUW98_18565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_18565 PF03466 LysR substrate binding domain MUW98_18580 PF01464 Transglycosylase SLT domain MUW98_18585 PF01048 Phosphorylase superfamily MUW98_18600 PF00005 ABC transporter MUW98_18600 PF12848 ABC transporter MUW98_18610 PF00860 Permease family MUW98_18615 PF00226 DnaJ domain MUW98_18615 PF05099 Tellurite resistance protein TerB MUW98_18620 PF00483 Nucleotidyl transferase MUW98_18625 PF01636 Phosphotransferase enzyme family MUW98_18630 PF04453 LPS transport system D MUW98_18630 PF03968 OstA-like protein MUW98_18635 PF00639 PPIC-type PPIASE domain MUW98_18635 PF09312 SurA N-terminal domain MUW98_18640 PF04166 Pyridoxal phosphate biosynthetic protein PdxA MUW98_18645 PF00398 Ribosomal RNA adenine dimethylase MUW98_18650 PF04379 ApaG domain MUW98_18655 PF00149 Calcineurin-like phosphoesterase MUW98_18665 PF00296 Luciferase-like monooxygenase MUW98_18685 PF00501 AMP-binding enzyme MUW98_18685 PF13193 AMP-binding enzyme C-terminal domain MUW98_18690 PF07670 Nucleoside recognition MUW98_18695 PF01018 GTP1/OBG MUW98_18695 PF01926 50S ribosome-binding GTPase MUW98_18700 PF01016 Ribosomal L27 protein MUW98_18705 PF00829 Ribosomal prokaryotic L21 protein MUW98_18710 PF00348 Polyprenyl synthetase MUW98_18715 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) MUW98_18720 PF01145 SPFH domain / Band 7 family MUW98_18725 PF01145 SPFH domain / Band 7 family MUW98_18725 PF12221 Bacterial membrane protein N terminal MUW98_18730 PF16360 GTP-binding GTPase Middle Region MUW98_18730 PF13167 GTP-binding GTPase N-terminal MUW98_18730 PF01926 50S ribosome-binding GTPase MUW98_18735 PF17209 Hfq protein MUW98_18745 PF01119 DNA mismatch repair protein, C-terminal domain MUW98_18745 PF08676 MutL C terminal dimerisation domain MUW98_18750 PF01520 N-acetylmuramoyl-L-alanine amidase MUW98_18755 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MUW98_18760 PF01256 Carbohydrate kinase MUW98_18760 PF03853 YjeF-related protein N-terminus MUW98_18765 PF08331 Domain of unknown function (DUF1730) MUW98_18770 PF00480 ROK family MUW98_18780 PF00005 ABC transporter MUW98_18780 PF09383 NIL domain MUW98_18785 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_18790 PF03180 NLPA lipoprotein MUW98_18795 PF02357 Transcription termination factor nusG MUW98_18800 PF00672 HAMP domain MUW98_18800 PF12729 Four helix bundle sensory module for signal transduction MUW98_18800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_18805 PF03707 Bacterial signalling protein N terminal repeat MUW98_18805 PF00563 EAL domain MUW98_18805 PF00990 Diguanylate cyclase, GGDEF domain MUW98_18810 PF00512 His Kinase A (phospho-acceptor) domain MUW98_18810 PF09456 RcsC Alpha-Beta-Loop (ABL) MUW98_18810 PF00072 Response regulator receiver domain MUW98_18810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_18820 PF13286 Phosphohydrolase-associated domain MUW98_18820 PF01966 HD domain MUW98_18825 PF18415 Histidine kinase receptor ArcB trans-membrane domain MUW98_18825 PF01627 Hpt domain MUW98_18825 PF00989 PAS fold MUW98_18825 PF00072 Response regulator receiver domain MUW98_18825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_18825 PF00512 His Kinase A (phospho-acceptor) domain MUW98_18845 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) MUW98_18850 PF03466 LysR substrate binding domain MUW98_18850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_18860 PF01259 SAICAR synthetase MUW98_18865 PF06804 NlpB/DapX lipoprotein MUW98_18870 PF00701 Dihydrodipicolinate synthetase family MUW98_18875 PF01842 ACT domain MUW98_18880 PF00578 AhpC/TSA family MUW98_18885 PF03887 YfbU domain MUW98_18890 PF04217 Protein of unknown function, DUF412 MUW98_18895 PF00871 Acetokinase family MUW98_18900 PF07085 DRTGG domain MUW98_18900 PF01515 Phosphate acetyl/butaryl transferase MUW98_18905 PF10369 Small subunit of acetolactate synthase MUW98_18910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MUW98_18910 PF00205 Thiamine pyrophosphate enzyme, central domain MUW98_18910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MUW98_18920 PF04101 Glycosyltransferase family 28 C-terminal domain MUW98_18920 PF03033 Glycosyltransferase family 28 N-terminal domain MUW98_18925 PF01569 PAP2 superfamily MUW98_18935 PF00682 HMGL-like MUW98_18935 PF08502 LeuA allosteric (dimerisation) domain MUW98_18940 PF00180 Isocitrate/isopropylmalate dehydrogenase MUW98_18945 PF00330 Aconitase family (aconitate hydratase) MUW98_18950 PF00694 Aconitase C-terminal domain MUW98_18970 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_18975 PF00005 ABC transporter MUW98_18985 PF02562 PhoH-like protein MUW98_18985 PF13638 PIN domain MUW98_18995 PF08343 Ribonucleotide reductase N-terminal MUW98_18995 PF02867 Ribonucleotide reductase, barrel domain MUW98_18995 PF00317 Ribonucleotide reductase, all-alpha domain MUW98_19025 PF12137 RNA polymerase recycling family C-terminal MUW98_19025 PF00176 SNF2 family N-terminal domain MUW98_19025 PF18339 RapA N-terminal Tudor like domain 1 MUW98_19025 PF18337 RapA N-terminal Tudor like domain MUW98_19025 PF00271 Helicase conserved C-terminal domain MUW98_19030 PF00849 RNA pseudouridylate synthase MUW98_19040 PF13188 PAS domain MUW98_19040 PF03707 Bacterial signalling protein N terminal repeat MUW98_19040 PF00990 Diguanylate cyclase, GGDEF domain MUW98_19040 PF00563 EAL domain MUW98_19050 PF00118 TCP-1/cpn60 chaperonin family MUW98_19055 PF00166 Chaperonin 10 Kd subunit MUW98_19060 PF01554 MatE MUW98_19065 PF04186 FxsA cytoplasmic membrane protein MUW98_19070 PF00206 Lyase MUW98_19070 PF10415 Fumarase C C-terminus MUW98_19075 PF03605 Anaerobic c4-dicarboxylate membrane transporter MUW98_19080 PF00267 Gram-negative porin MUW98_19085 PF07690 Major Facilitator Superfamily MUW98_19090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_19090 PF03466 LysR substrate binding domain MUW98_19095 PF07504 Fungalysin/Thermolysin Propeptide Motif MUW98_19095 PF03413 Peptidase propeptide and YPEB domain MUW98_19095 PF01447 Thermolysin metallopeptidase, catalytic domain MUW98_19095 PF02868 Thermolysin metallopeptidase, alpha-helical domain MUW98_19095 PF04151 Bacterial pre-peptidase C-terminal domain MUW98_19100 PF13302 Acetyltransferase (GNAT) domain MUW98_19105 PF13302 Acetyltransferase (GNAT) domain MUW98_19115 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MUW98_19115 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MUW98_19120 PF07690 Major Facilitator Superfamily MUW98_19125 PF01725 Ham1 family MUW98_19130 PF06969 HemN C-terminal domain MUW98_19130 PF04055 Radical SAM superfamily MUW98_19135 PF03889 Alternative ribosome-rescue factor A MUW98_19140 PF01872 RibD C-terminal domain MUW98_19145 PF13411 MerR HTH family regulatory protein MUW98_19150 PF01808 AICARFT/IMPCHase bienzyme MUW98_19150 PF02142 MGS-like domain MUW98_19155 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MUW98_19155 PF02844 Phosphoribosylglycinamide synthetase, N domain MUW98_19155 PF02843 Phosphoribosylglycinamide synthetase, C domain MUW98_19170 PF00128 Alpha amylase, catalytic domain MUW98_19180 PF04546 Sigma-70, non-essential region MUW98_19180 PF03979 Sigma-70 factor, region 1.1 MUW98_19180 PF00140 Sigma-70 factor, region 1.2 MUW98_19180 PF04542 Sigma-70 region 2 MUW98_19180 PF04539 Sigma-70 region 3 MUW98_19180 PF04545 Sigma-70, region 4 MUW98_19185 PF01807 CHC2 zinc finger MUW98_19185 PF10410 DnaB-helicase binding domain of primase MUW98_19185 PF08275 DNA primase catalytic core, N-terminal domain MUW98_19185 PF08278 DNA primase DnaG DnaB-binding MUW98_19190 PF09424 Yqey-like protein MUW98_19195 PF01165 Ribosomal protein S21 MUW98_19200 PF00814 Glycoprotease family MUW98_19205 PF00140 Sigma-70 factor, region 1.2 MUW98_19205 PF04542 Sigma-70 region 2 MUW98_19205 PF04539 Sigma-70 region 3 MUW98_19205 PF04545 Sigma-70, region 4 MUW98_19210 PF01476 LysM domain MUW98_19210 PF01551 Peptidase family M23 MUW98_19215 PF09335 SNARE associated Golgi protein MUW98_19225 PF01975 Survival protein SurE MUW98_19230 PF01142 tRNA pseudouridine synthase D (TruD) MUW98_19235 PF02542 YgbB family MUW98_19240 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MUW98_19245 PF04977 Septum formation initiator MUW98_19250 PF00113 Enolase, C-terminal TIM barrel domain MUW98_19250 PF03952 Enolase, N-terminal domain MUW98_19255 PF00117 Glutamine amidotransferase class-I MUW98_19255 PF06418 CTP synthase N-terminus MUW98_19260 PF03819 MazG nucleotide pyrophosphohydrolase domain MUW98_19265 PF02824 TGS domain MUW98_19265 PF04607 Region found in RelA / SpoT proteins MUW98_19265 PF13291 ACT domain MUW98_19270 PF01938 TRAM domain MUW98_19270 PF05958 tRNA (Uracil-5-)-methyltransferase MUW98_19275 PF00072 Response regulator receiver domain MUW98_19275 PF01627 Hpt domain MUW98_19275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_19275 PF00672 HAMP domain MUW98_19275 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MUW98_19275 PF00512 His Kinase A (phospho-acceptor) domain MUW98_19280 PF07308 Protein of unknown function (DUF1456) MUW98_19285 PF01510 N-acetylmuramoyl-L-alanine amidase MUW98_19290 PF08220 DeoR-like helix-turn-helix domain MUW98_19290 PF00455 DeoR C terminal sensor domain MUW98_19295 PF08013 Tagatose 6 phosphate kinase MUW98_19300 PF01380 SIS domain MUW98_19305 PF03830 PTS system sorbose subfamily IIB component MUW98_19310 PF03609 PTS system sorbose-specific iic component MUW98_19315 PF03613 PTS system mannose/fructose/sorbose family IID component MUW98_19320 PF03610 PTS system fructose IIA component MUW98_19325 PF01979 Amidohydrolase family MUW98_19330 PF01116 Fructose-bisphosphate aldolase class-II MUW98_19340 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ MUW98_19345 PF02565 Recombination protein O C terminal MUW98_19345 PF11967 Recombination protein O N terminal MUW98_19350 PF07650 KH domain MUW98_19350 PF01926 50S ribosome-binding GTPase MUW98_19355 PF14622 Ribonuclease-III-like MUW98_19355 PF00035 Double-stranded RNA binding motif MUW98_19360 PF10502 Signal peptidase, peptidase S26 MUW98_19365 PF03144 Elongation factor Tu domain 2 MUW98_19365 PF00009 Elongation factor Tu GTP binding domain MUW98_19365 PF06421 GTP-binding protein LepA C-terminus MUW98_19365 PF00679 Elongation factor G C-terminus MUW98_19375 PF03888 MucB/RseB N-terminal domain MUW98_19375 PF17188 MucB/RseB C-terminal domain MUW98_19380 PF03873 Anti sigma-E protein RseA, C-terminal domain MUW98_19380 PF03872 Anti sigma-E protein RseA, N-terminal domain MUW98_19385 PF04542 Sigma-70 region 2 MUW98_19385 PF08281 Sigma-70, region 4 MUW98_19390 PF02910 Fumarate reductase flavoprotein C-term MUW98_19390 PF00890 FAD binding domain MUW98_19400 PF03937 Flavinator of succinate dehydrogenase MUW98_19405 PF01571 Aminomethyltransferase folate-binding domain MUW98_19410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_19410 PF03466 LysR substrate binding domain MUW98_19425 PF03091 CutA1 divalent ion tolerance protein MUW98_19430 PF11412 Disulphide bond corrector protein DsbC MUW98_19430 PF02683 Cytochrome C biogenesis protein transmembrane region MUW98_19440 PF01266 FAD dependent oxidoreductase MUW98_19445 PF01116 Fructose-bisphosphate aldolase class-II MUW98_19450 PF00162 Phosphoglycerate kinase MUW98_19455 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MUW98_19455 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MUW98_19460 PF00480 ROK family MUW98_19465 PF01208 Uroporphyrinogen decarboxylase (URO-D) MUW98_19470 PF00293 NUDIX domain MUW98_19470 PF09297 NADH pyrophosphatase zinc ribbon domain MUW98_19475 PF00171 Aldehyde dehydrogenase family MUW98_19475 PF01619 Proline dehydrogenase MUW98_19475 PF14850 DNA-binding domain of Proline dehydrogenase MUW98_19475 PF18327 Proline utilization A proline dehydrogenase N-terminal domain MUW98_19480 PF08239 Bacterial SH3 domain MUW98_19485 PF00027 Cyclic nucleotide-binding domain MUW98_19485 PF00520 Ion transport protein MUW98_19490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_19490 PF00672 HAMP domain MUW98_19490 PF02743 Cache domain MUW98_19500 PF03710 Glutamate-ammonia ligase adenylyltransferase MUW98_19500 PF08335 GlnD PII-uridylyltransferase MUW98_19520 PF00326 Prolyl oligopeptidase family MUW98_19520 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MUW98_19525 PF00291 Pyridoxal-phosphate dependent enzyme MUW98_19530 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_19535 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_19540 PF00005 ABC transporter MUW98_19545 PF00497 Bacterial extracellular solute-binding proteins, family 3 MUW98_19550 PF00005 ABC transporter MUW98_19550 PF02687 FtsX-like permease family MUW98_19550 PF12704 MacB-like periplasmic core domain MUW98_19555 PF00529 HlyD membrane-fusion protein of T1SS MUW98_19555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MUW98_19560 PF00072 Response regulator receiver domain MUW98_19560 PF00486 Transcriptional regulatory protein, C terminal MUW98_19565 PF16527 Two-component sensor protein CpxA, periplasmic domain MUW98_19565 PF00672 HAMP domain MUW98_19565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_19565 PF00512 His Kinase A (phospho-acceptor) domain MUW98_19570 PF09297 NADH pyrophosphatase zinc ribbon domain MUW98_19570 PF00293 NUDIX domain MUW98_19570 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain MUW98_19605 PF03060 Nitronate monooxygenase MUW98_19615 PF00445 Ribonuclease T2 family MUW98_19630 PF00034 Cytochrome c MUW98_19630 PF03150 Di-haem cytochrome c peroxidase MUW98_19635 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase MUW98_19655 PF03466 LysR substrate binding domain MUW98_19655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_19660 PF00270 DEAD/DEAH box helicase MUW98_19660 PF00271 Helicase conserved C-terminal domain MUW98_19670 PF00753 Metallo-beta-lactamase superfamily MUW98_19680 PF01425 Amidase MUW98_19685 PF04371 Porphyromonas-type peptidyl-arginine deiminase MUW98_19690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_19690 PF03466 LysR substrate binding domain MUW98_19695 PF04480 Protein of unknown function (DUF559) MUW98_19705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MUW98_19710 PF00583 Acetyltransferase (GNAT) family MUW98_19730 PF00009 Elongation factor Tu GTP binding domain MUW98_19730 PF03144 Elongation factor Tu domain 2 MUW98_19730 PF16658 Class II release factor RF3, C-terminal domain MUW98_19735 PF00990 Diguanylate cyclase, GGDEF domain MUW98_19735 PF00072 Response regulator receiver domain MUW98_19740 PF13188 PAS domain MUW98_19740 PF00563 EAL domain MUW98_19740 PF00990 Diguanylate cyclase, GGDEF domain MUW98_19740 PF03707 Bacterial signalling protein N terminal repeat MUW98_19745 PF05762 VWA domain containing CoxE-like protein MUW98_19750 PF12592 Protein of unknown function (DUF3763) MUW98_19750 PF17868 AAA lid domain MUW98_19750 PF07728 AAA domain (dynein-related subfamily) MUW98_19760 PF00583 Acetyltransferase (GNAT) family MUW98_19770 PF00501 AMP-binding enzyme MUW98_19775 PF04262 Glutamate-cysteine ligase MUW98_19780 PF00675 Insulinase (Peptidase family M16) MUW98_19780 PF05193 Peptidase M16 inactive domain MUW98_19785 PF09335 SNARE associated Golgi protein MUW98_19790 PF14765 Polyketide synthase dehydratase MUW98_19790 PF00550 Phosphopantetheine attachment site MUW98_19790 PF08659 KR domain MUW98_19790 PF02801 Beta-ketoacyl synthase, C-terminal domain MUW98_19790 PF00109 Beta-ketoacyl synthase, N-terminal domain MUW98_19790 PF08990 Erythronolide synthase docking MUW98_19790 PF08240 Alcohol dehydrogenase GroES-like domain MUW98_19790 PF00698 Acyl transferase domain MUW98_19790 PF16197 Ketoacyl-synthetase C-terminal extension MUW98_19810 PF00175 Oxidoreductase NAD-binding domain MUW98_19810 PF00970 Oxidoreductase FAD-binding domain MUW98_19815 PF01281 Ribosomal protein L9, N-terminal domain MUW98_19815 PF03948 Ribosomal protein L9, C-terminal domain MUW98_19820 PF01084 Ribosomal protein S18 MUW98_19825 PF01250 Ribosomal protein S6 MUW98_19830 PF01566 Natural resistance-associated macrophage protein MUW98_19850 PF13673 Acetyltransferase (GNAT) domain MUW98_19860 PF00588 SpoU rRNA Methylase family MUW98_19860 PF08032 RNA 2'-O ribose methyltransferase substrate binding MUW98_19865 PF17876 Cold shock domain MUW98_19865 PF08461 Ribonuclease R winged-helix domain MUW98_19865 PF08206 Ribonuclease B OB domain MUW98_19865 PF00773 RNB domain MUW98_19865 PF00575 S1 RNA binding domain MUW98_19870 PF00990 Diguanylate cyclase, GGDEF domain MUW98_19875 PF02664 S-Ribosylhomocysteinase (LuxS) MUW98_19885 PF00543 Nitrogen regulatory protein P-II MUW98_19890 PF02540 NAD synthase MUW98_19890 PF00795 Carbon-nitrogen hydrolase MUW98_19935 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor MUW98_19935 PF07963 Prokaryotic N-terminal methylation motif MUW98_19940 PF02401 LytB protein MUW98_19945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MUW98_19950 PF01252 Signal peptidase (SPase) II MUW98_19955 PF08264 Anticodon-binding domain of tRNA MUW98_19955 PF00133 tRNA synthetases class I (I, L, M and V) MUW98_19955 PF06827 Zinc finger found in FPG and IleRS MUW98_19960 PF06574 FAD synthetase MUW98_19960 PF01687 Riboflavin kinase MUW98_19970 PF03023 Lipid II flippase MurJ MUW98_19975 PF01649 Ribosomal protein S20 MUW98_19980 PF01022 Bacterial regulatory protein, arsR family MUW98_19985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_19985 PF03466 LysR substrate binding domain MUW98_19995 PF06965 Na+/H+ antiporter 1 MUW98_20000 PF00303 Thymidylate synthase MUW98_20005 PF01790 Prolipoprotein diacylglyceryl transferase MUW98_20010 PF01590 GAF domain MUW98_20010 PF05524 PEP-utilising enzyme, N-terminal MUW98_20010 PF00391 PEP-utilising enzyme, mobile domain MUW98_20010 PF02896 PEP-utilising enzyme, TIM barrel domain MUW98_20015 PF00293 NUDIX domain MUW98_20020 PF02976 DNA mismatch repair enzyme MutH MUW98_20030 PF01245 Ribosomal protein L19 MUW98_20035 PF01746 tRNA (Guanine-1)-methyltransferase MUW98_20040 PF05239 PRC-barrel domain MUW98_20040 PF01782 RimM N-terminal domain MUW98_20045 PF00886 Ribosomal protein S16 MUW98_20050 PF02881 SRP54-type protein, helical bundle domain MUW98_20050 PF02978 Signal peptide binding domain MUW98_20050 PF00448 SRP54-type protein, GTPase domain MUW98_20055 PF01578 Cytochrome C assembly protein MUW98_20060 PF00571 CBS domain MUW98_20060 PF03471 Transporter associated domain MUW98_20060 PF01595 Cyclin M transmembrane N-terminal domain MUW98_20065 PF02082 Transcriptional regulator MUW98_20070 PF00175 Oxidoreductase NAD-binding domain MUW98_20070 PF00970 Oxidoreductase FAD-binding domain MUW98_20070 PF00042 Globin MUW98_20075 PF08238 Sel1 repeat MUW98_20080 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MUW98_20080 PF00056 lactate/malate dehydrogenase, NAD binding domain MUW98_20085 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_20090 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_20095 PF00497 Bacterial extracellular solute-binding proteins, family 3 MUW98_20100 PF00005 ABC transporter MUW98_20105 PF02863 Arginine repressor, C-terminal domain MUW98_20105 PF01316 Arginine repressor, DNA binding domain MUW98_20110 PF04261 Dyp-type peroxidase family MUW98_20115 PF00005 ABC transporter MUW98_20115 PF08402 TOBE domain MUW98_20125 PF13416 Bacterial extracellular solute-binding protein MUW98_20130 PF00543 Nitrogen regulatory protein P-II MUW98_20135 PF00472 RF-1 domain MUW98_20140 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MUW98_20140 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MUW98_20145 PF07670 Nucleoside recognition MUW98_20145 PF07662 Na+ dependent nucleoside transporter C-terminus MUW98_20145 PF01773 Na+ dependent nucleoside transporter N-terminus MUW98_20150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_20150 PF03466 LysR substrate binding domain MUW98_20155 PF00255 Glutathione peroxidase MUW98_20165 PF02595 Glycerate kinase family MUW98_20170 PF02447 GntP family permease MUW98_20175 PF17853 GGDEF-like domain MUW98_20175 PF13556 PucR C-terminal helix-turn-helix domain MUW98_20175 PF05651 Putative sugar diacid recognition MUW98_20185 PF06062 Uncharacterised protein family (UPF0231) MUW98_20200 PF08447 PAS fold MUW98_20200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_20205 PF03372 Endonuclease/Exonuclease/phosphatase family MUW98_20220 PF00270 DEAD/DEAH box helicase MUW98_20220 PF00271 Helicase conserved C-terminal domain MUW98_20230 PF08534 Redoxin MUW98_20235 PF00403 Heavy-metal-associated domain MUW98_20255 PF02583 Metal-sensitive transcriptional repressor MUW98_20260 PF00155 Aminotransferase class I and II MUW98_20265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_20265 PF03466 LysR substrate binding domain MUW98_20275 PF04055 Radical SAM superfamily MUW98_20280 PF11230 Protein of unknown function (DUF3029) MUW98_20300 PF03572 Peptidase family S41 MUW98_20300 PF14685 Tricorn protease PDZ domain MUW98_20300 PF14684 Tricorn protease C1 domain MUW98_20300 PF07676 WD40-like Beta Propeller Repeat MUW98_20330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_20330 PF08269 Cache domain MUW98_20335 PF18416 N-acetylglucosamine binding protein domain 2 MUW98_20335 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading MUW98_20340 PF03466 LysR substrate binding domain MUW98_20340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_20345 PF00005 ABC transporter MUW98_20345 PF12857 TOBE-like domain MUW98_20350 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_20355 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_20370 PF13194 Domain of unknown function (DUF4010) MUW98_20375 PF12464 Maltose acetyltransferase MUW98_20375 PF14602 Hexapeptide repeat of succinyl-transferase MUW98_20400 PF14698 Argininosuccinate lyase C-terminal MUW98_20400 PF00206 Lyase MUW98_20405 PF00764 Arginosuccinate synthase MUW98_20410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MUW98_20410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MUW98_20415 PF00696 Amino acid kinase family MUW98_20420 PF01118 Semialdehyde dehydrogenase, NAD binding domain MUW98_20420 PF02774 Semialdehyde dehydrogenase, dimerisation domain MUW98_20425 PF01546 Peptidase family M20/M25/M40 MUW98_20425 PF07687 Peptidase dimerisation domain MUW98_20430 PF00311 Phosphoenolpyruvate carboxylase MUW98_20435 PF00696 Amino acid kinase family MUW98_20435 PF03447 Homoserine dehydrogenase, NAD binding domain MUW98_20435 PF00742 Homoserine dehydrogenase MUW98_20440 PF01053 Cys/Met metabolism PLP-dependent enzyme MUW98_20445 PF01340 Met Apo-repressor, MetJ MUW98_20450 PF06445 GyrI-like small molecule binding domain MUW98_20450 PF12833 Helix-turn-helix domain MUW98_20455 PF01588 Putative tRNA binding domain MUW98_20460 PF03222 Tryptophan/tyrosine permease family MUW98_20465 PF00459 Inositol monophosphatase family MUW98_20470 PF00293 NUDIX domain MUW98_20475 PF13419 Haloacid dehalogenase-like hydrolase MUW98_20480 PF01479 S4 domain MUW98_20480 PF00579 tRNA synthetases class I (W and Y) MUW98_20485 PF00196 Bacterial regulatory proteins, luxR family MUW98_20490 PF01203 Type II secretion system (T2SS), protein N MUW98_20495 PF04612 Type II secretion system (T2SS), protein M MUW98_20500 PF12693 GspL periplasmic domain MUW98_20500 PF05134 Type II secretion system (T2SS), protein L MUW98_20505 PF03934 Type II secretion system (T2SS), protein K MUW98_20510 PF07963 Prokaryotic N-terminal methylation motif MUW98_20510 PF11612 Type II secretion system (T2SS), protein J MUW98_20515 PF07963 Prokaryotic N-terminal methylation motif MUW98_20515 PF02501 Type II secretion system (T2SS), protein I MUW98_20520 PF12019 Type II transport protein GspH MUW98_20520 PF07963 Prokaryotic N-terminal methylation motif MUW98_20530 PF07963 Prokaryotic N-terminal methylation motif MUW98_20530 PF08334 Type II secretion system (T2SS), protein G MUW98_20535 PF00482 Type II secretion system (T2SS), protein F MUW98_20540 PF00437 Type II/IV secretion system protein MUW98_20545 PF03958 Bacterial type II/III secretion system short domain MUW98_20545 PF00263 Bacterial type II and III secretion system protein MUW98_20550 PF11356 Type II secretion system protein C MUW98_20555 PF01479 S4 domain MUW98_20560 PF01430 Hsp33 protein MUW98_20565 PF01293 Phosphoenolpyruvate carboxykinase MUW98_20570 PF00392 Bacterial regulatory proteins, gntR family MUW98_20575 PF01321 Creatinase/Prolidase N-terminal domain MUW98_20575 PF00557 Metallopeptidase family M24 MUW98_20580 PF11756 Nitrous oxide-stimulated promoter MUW98_20585 PF00583 Acetyltransferase (GNAT) family MUW98_20590 PF05433 Glycine zipper 2TM domain MUW98_20595 PF02872 5'-nucleotidase, C-terminal domain MUW98_20595 PF00149 Calcineurin-like phosphoesterase MUW98_20600 PF01810 LysE type translocator MUW98_20605 PF03472 Autoinducer binding domain MUW98_20605 PF00196 Bacterial regulatory proteins, luxR family MUW98_20610 PF00765 Autoinducer synthase MUW98_20615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_20615 PF03466 LysR substrate binding domain MUW98_20620 PF17876 Cold shock domain MUW98_20620 PF08206 Ribonuclease B OB domain MUW98_20620 PF00773 RNB domain MUW98_20625 PF00440 Bacterial regulatory proteins, tetR family MUW98_20635 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MUW98_20635 PF02378 Phosphotransferase system, EIIC MUW98_20635 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MUW98_20640 PF01232 Mannitol dehydrogenase Rossmann domain MUW98_20640 PF08125 Mannitol dehydrogenase C-terminal domain MUW98_20645 PF05068 Mannitol repressor MUW98_20650 PF03471 Transporter associated domain MUW98_20650 PF00999 Sodium/hydrogen exchanger family MUW98_20650 PF02080 TrkA-C domain MUW98_20670 PF01544 CorA-like Mg2+ transporter protein MUW98_20675 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 MUW98_20690 PF04307 LexA-binding, inner membrane-associated putative hydrolase MUW98_20695 PF07670 Nucleoside recognition MUW98_20695 PF01773 Na+ dependent nucleoside transporter N-terminus MUW98_20695 PF07662 Na+ dependent nucleoside transporter C-terminus MUW98_20705 PF03880 DbpA RNA binding domain MUW98_20705 PF00270 DEAD/DEAH box helicase MUW98_20705 PF00271 Helicase conserved C-terminal domain MUW98_20730 PF01040 UbiA prenyltransferase family MUW98_20735 PF00425 chorismate binding enzyme MUW98_20740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MUW98_20740 PF16582 Middle domain of thiamine pyrophosphate MUW98_20740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MUW98_20745 PF12697 Alpha/beta hydrolase family MUW98_20750 PF00378 Enoyl-CoA hydratase/isomerase MUW98_20755 PF13378 Enolase C-terminal domain-like MUW98_20760 PF00501 AMP-binding enzyme MUW98_20770 PF00872 Transposase, Mutator family MUW98_20780 PF00419 Fimbrial protein MUW98_20785 PF00419 Fimbrial protein MUW98_20790 PF02753 Pili assembly chaperone PapD, C-terminal domain MUW98_20790 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MUW98_20795 PF13953 PapC C-terminal domain MUW98_20795 PF13954 PapC N-terminal domain MUW98_20795 PF00577 Outer membrane usher protein MUW98_20805 PF00419 Fimbrial protein MUW98_20815 PF01752 Collagenase MUW98_20815 PF08453 Peptidase family M9 N-terminal MUW98_20820 PF02698 DUF218 domain MUW98_20825 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MUW98_20825 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MUW98_20835 PF00561 alpha/beta hydrolase fold MUW98_20840 PF03280 Proteobacterial lipase chaperone protein MUW98_20855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MUW98_20855 PF12793 Sugar transport-related sRNA regulator N-term MUW98_20865 PF01053 Cys/Met metabolism PLP-dependent enzyme MUW98_20875 PF00465 Iron-containing alcohol dehydrogenase MUW98_20890 PF03577 Peptidase family C69 MUW98_20895 PF00106 short chain dehydrogenase MUW98_20915 PF02308 MgtC family MUW98_20920 PF00128 Alpha amylase, catalytic domain MUW98_20920 PF02903 Alpha amylase, N-terminal ig-like domain MUW98_20920 PF16657 Maltogenic Amylase, C-terminal domain MUW98_20935 PF00884 Sulfatase MUW98_20940 PF01037 Lrp/AsnC ligand binding domain MUW98_20950 PF04204 Homoserine O-succinyltransferase MUW98_20955 PF01966 HD domain MUW98_20955 PF00013 KH domain MUW98_20955 PF12072 Domain of unknown function (DUF3552) MUW98_20960 PF02464 Competence-damaged protein MUW98_20960 PF00994 Probable molybdopterin binding domain MUW98_20970 PF00005 ABC transporter MUW98_20990 PF07722 Peptidase C26 MUW98_21000 PF00027 Cyclic nucleotide-binding domain MUW98_21000 PF13545 Crp-like helix-turn-helix domain MUW98_21010 PF13419 Haloacid dehalogenase-like hydrolase MUW98_21015 PF00589 Phage integrase family MUW98_21015 PF02899 Phage integrase, N-terminal SAM-like domain MUW98_21025 PF01678 Diaminopimelate epimerase MUW98_21030 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MUW98_21030 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MUW98_21040 PF01491 Frataxin-like domain MUW98_21045 PF02230 Phospholipase/Carboxylesterase MUW98_21050 PF12633 Adenylate cyclase NT domain MUW98_21050 PF01295 Adenylate cyclase, class-I MUW98_21055 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MUW98_21055 PF03900 Porphobilinogen deaminase, C-terminal domain MUW98_21060 PF02602 Uroporphyrinogen-III synthase HemD MUW98_21065 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase MUW98_21075 PF03692 Putative zinc- or iron-chelating domain MUW98_21080 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded MUW98_21095 PF00593 TonB dependent receptor MUW98_21095 PF07715 TonB-dependent Receptor Plug Domain MUW98_21120 PF01638 HxlR-like helix-turn-helix MUW98_21125 PF08803 Putative mono-oxygenase ydhR MUW98_21140 PF06055 Exopolysaccharide synthesis, ExoD MUW98_21150 PF17151 Periplasmic sensor domain MUW98_21150 PF00990 Diguanylate cyclase, GGDEF domain MUW98_21170 PF13036 Peptidoglycan-synthase activator LpoB MUW98_21185 PF06968 Biotin and Thiamin Synthesis associated domain MUW98_21185 PF04055 Radical SAM superfamily MUW98_21190 PF05690 Thiazole biosynthesis protein ThiG MUW98_21200 PF00899 ThiF family MUW98_21205 PF02581 Thiamine monophosphate synthase MUW98_21210 PF01964 Radical SAM ThiC family MUW98_21210 PF13667 ThiC-associated domain MUW98_21215 PF03440 Aerolysin/Pertussis toxin (APT) domain MUW98_21215 PF01117 Aerolysin toxin MUW98_21220 PF05935 Arylsulfotransferase (ASST) MUW98_21220 PF17425 Arylsulfotransferase Ig-like domain MUW98_21235 PF00072 Response regulator receiver domain MUW98_21235 PF00486 Transcriptional regulatory protein, C terminal MUW98_21240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_21245 PF05525 Branched-chain amino acid transport protein MUW98_21250 PF08443 RimK-like ATP-grasp domain MUW98_21250 PF18030 RimK PreATP-grasp domain MUW98_21255 PF02310 B12 binding domain MUW98_21255 PF02607 B12 binding domain MUW98_21255 PF02965 Vitamin B12 dependent methionine synthase, activation domain MUW98_21255 PF00809 Pterin binding enzyme MUW98_21255 PF02574 Homocysteine S-methyltransferase MUW98_21260 PF00999 Sodium/hydrogen exchanger family MUW98_21275 PF08668 HDOD domain MUW98_21285 PF04228 Putative neutral zinc metallopeptidase MUW98_21290 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) MUW98_21305 PF08447 PAS fold MUW98_21305 PF13426 PAS domain MUW98_21305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_21310 PF08678 Rsbr N terminal MUW98_21310 PF01740 STAS domain MUW98_21315 PF13581 Histidine kinase-like ATPase domain MUW98_21320 PF00512 His Kinase A (phospho-acceptor) domain MUW98_21320 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MUW98_21320 PF00072 Response regulator receiver domain MUW98_21320 PF00672 HAMP domain MUW98_21320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_21320 PF01627 Hpt domain MUW98_21325 PF00072 Response regulator receiver domain MUW98_21335 PF07690 Major Facilitator Superfamily MUW98_21340 PF01914 MarC family integral membrane protein MUW98_21350 PF13580 SIS domain MUW98_21355 PF00367 phosphotransferase system, EIIB MUW98_21355 PF02378 Phosphotransferase system, EIIC MUW98_21370 PF01380 SIS domain MUW98_21370 PF01418 Helix-turn-helix domain, rpiR family MUW98_21375 PF01523 Putative modulator of DNA gyrase MUW98_21380 PF00795 Carbon-nitrogen hydrolase MUW98_21390 PF13502 AsmA-like C-terminal region MUW98_21390 PF13116 Protein of unknown function MUW98_21395 PF10150 Ribonuclease E/G family MUW98_21395 PF00575 S1 RNA binding domain MUW98_21400 PF02545 Maf-like protein MUW98_21405 PF04093 rod shape-determining protein MreD MUW98_21410 PF04085 rod shape-determining protein MreC MUW98_21440 PF07963 Prokaryotic N-terminal methylation motif MUW98_21440 PF00114 Pilin (bacterial filament) MUW98_21450 PF07963 Prokaryotic N-terminal methylation motif MUW98_21460 PF00482 Type II secretion system (T2SS), protein F MUW98_21465 PF00437 Type II/IV secretion system protein MUW98_21465 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MUW98_21480 PF00263 Bacterial type II and III secretion system protein MUW98_21480 PF03958 Bacterial type II/III secretion system short domain MUW98_21510 PF00563 EAL domain MUW98_21510 PF17157 Gammaproteobacterial periplasmic sensor domain MUW98_21510 PF00990 Diguanylate cyclase, GGDEF domain MUW98_21515 PF12792 CSS motif domain associated with EAL MUW98_21515 PF00563 EAL domain MUW98_21520 PF01699 Sodium/calcium exchanger protein MUW98_21525 PF00221 Aromatic amino acid lyase MUW98_21530 PF01175 Urocanase Rossmann-like domain MUW98_21530 PF17392 Urocanase C-terminal domain MUW98_21530 PF17391 Urocanase N-terminal domain MUW98_21535 PF00491 Arginase family MUW98_21540 PF01979 Amidohydrolase family MUW98_21545 PF00392 Bacterial regulatory proteins, gntR family MUW98_21545 PF07702 UTRA domain MUW98_21550 PF00484 Carbonic anhydrase MUW98_21555 PF04545 Sigma-70, region 4 MUW98_21555 PF04542 Sigma-70 region 2 MUW98_21555 PF00140 Sigma-70 factor, region 1.2 MUW98_21560 PF18075 FtsX extracellular domain MUW98_21565 PF00005 ABC transporter MUW98_21570 PF02881 SRP54-type protein, helical bundle domain MUW98_21570 PF00448 SRP54-type protein, GTPase domain MUW98_21585 PF07226 Protein of unknown function (DUF1422) MUW98_21590 PF00440 Bacterial regulatory proteins, tetR family MUW98_21600 PF13091 PLD-like domain MUW98_21610 PF01464 Transglycosylase SLT domain MUW98_21620 PF02416 mttA/Hcf106 family MUW98_21625 PF03466 LysR substrate binding domain MUW98_21625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_21630 PF01914 MarC family integral membrane protein MUW98_21635 PF10678 Protein of unknown function (DUF2492) MUW98_21640 PF00375 Sodium:dicarboxylate symporter family MUW98_21650 PF03466 LysR substrate binding domain MUW98_21650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_21655 PF13533 Biotin-lipoyl like MUW98_21660 PF07690 Major Facilitator Superfamily MUW98_21665 PF07947 YhhN family MUW98_21685 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MUW98_21685 PF00326 Prolyl oligopeptidase family MUW98_21700 PF00106 short chain dehydrogenase MUW98_21705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_21705 PF03466 LysR substrate binding domain MUW98_21710 PF02525 Flavodoxin-like fold MUW98_21715 PF00999 Sodium/hydrogen exchanger family MUW98_21715 PF02254 TrkA-N domain MUW98_21760 PF01196 Ribosomal protein L17 MUW98_21765 PF01000 RNA polymerase Rpb3/RpoA insert domain MUW98_21765 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MUW98_21765 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MUW98_21770 PF01479 S4 domain MUW98_21770 PF00163 Ribosomal protein S4/S9 N-terminal domain MUW98_21775 PF00411 Ribosomal protein S11 MUW98_21780 PF00416 Ribosomal protein S13/S18 MUW98_21785 PF00444 Ribosomal protein L36 MUW98_21790 PF00344 SecY translocase MUW98_21795 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MUW98_21800 PF00327 Ribosomal protein L30p/L7e MUW98_21805 PF00333 Ribosomal protein S5, N-terminal domain MUW98_21805 PF03719 Ribosomal protein S5, C-terminal domain MUW98_21810 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MUW98_21815 PF00347 Ribosomal protein L6 MUW98_21820 PF00410 Ribosomal protein S8 MUW98_21825 PF00253 Ribosomal protein S14p/S29e MUW98_21830 PF00673 ribosomal L5P family C-terminus MUW98_21830 PF00281 Ribosomal protein L5 MUW98_21835 PF00467 KOW motif MUW98_21835 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MUW98_21840 PF00238 Ribosomal protein L14p/L23e MUW98_21845 PF00366 Ribosomal protein S17 MUW98_21850 PF00831 Ribosomal L29 protein MUW98_21855 PF00252 Ribosomal protein L16p/L10e MUW98_21860 PF00189 Ribosomal protein S3, C-terminal domain MUW98_21860 PF07650 KH domain MUW98_21865 PF00237 Ribosomal protein L22p/L17e MUW98_21870 PF00203 Ribosomal protein S19 MUW98_21875 PF00181 Ribosomal Proteins L2, RNA binding domain MUW98_21875 PF03947 Ribosomal Proteins L2, C-terminal domain MUW98_21880 PF00276 Ribosomal protein L23 MUW98_21885 PF00573 Ribosomal protein L4/L1 family MUW98_21890 PF00297 Ribosomal protein L3 MUW98_21895 PF00338 Ribosomal protein S10p/S20e MUW98_21905 PF00672 HAMP domain MUW98_21905 PF00512 His Kinase A (phospho-acceptor) domain MUW98_21905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_21910 PF00486 Transcriptional regulatory protein, C terminal MUW98_21910 PF00072 Response regulator receiver domain MUW98_21915 PF01272 Transcription elongation factor, GreA/GreB, C-term MUW98_21915 PF03449 Transcription elongation factor, N-terminal MUW98_21920 PF17674 HHH domain MUW98_21920 PF00575 S1 RNA binding domain MUW98_21920 PF09371 Tex-like protein N-terminal domain MUW98_21920 PF16921 Tex protein YqgF-like domain MUW98_21940 PF00561 alpha/beta hydrolase fold MUW98_21945 PF00156 Phosphoribosyl transferase domain MUW98_21950 PF01521 Iron-sulphur cluster biosynthesis MUW98_21950 PF01106 NifU-like domain MUW98_21955 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MUW98_21955 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MUW98_21960 PF02556 Preprotein translocase subunit SecB MUW98_21965 PF00581 Rhodanese-like domain MUW98_21970 PF01676 Metalloenzyme superfamily MUW98_21970 PF06415 BPG-independent PGAM N-terminus (iPGM_N) MUW98_21975 PF01551 Peptidase family M23 MUW98_21985 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MUW98_21985 PF00356 Bacterial regulatory proteins, lacI family MUW98_21990 PF01081 KDPG and KHG aldolase MUW98_21995 PF00920 Dehydratase family MUW98_22000 PF01202 Shikimate kinase MUW98_22005 PF02447 GntP family permease MUW98_22010 PF13091 PLD-like domain MUW98_22015 PF00270 DEAD/DEAH box helicase MUW98_22015 PF00271 Helicase conserved C-terminal domain MUW98_22015 PF17191 RecG wedge domain MUW98_22025 PF00583 Acetyltransferase (GNAT) family MUW98_22025 PF09500 Putative thioesterase (yiiD_Cterm) MUW98_22035 PF02580 D-Tyr-tRNA(Tyr) deacylase MUW98_22045 PF03631 Virulence factor BrkB MUW98_22050 PF00009 Elongation factor Tu GTP binding domain MUW98_22050 PF03144 Elongation factor Tu domain 2 MUW98_22050 PF00679 Elongation factor G C-terminus MUW98_22055 PF00120 Glutamine synthetase, catalytic domain MUW98_22055 PF03951 Glutamine synthetase, beta-Grasp domain MUW98_22065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_22065 PF00512 His Kinase A (phospho-acceptor) domain MUW98_22065 PF00989 PAS fold MUW98_22070 PF00158 Sigma-54 interaction domain MUW98_22070 PF00072 Response regulator receiver domain MUW98_22070 PF02954 Bacterial regulatory protein, Fis family MUW98_22075 PF00962 Adenosine/AMP deaminase MUW98_22080 PF06969 HemN C-terminal domain MUW98_22080 PF04055 Radical SAM superfamily MUW98_22085 PF10675 Protein of unknown function (DUF2489) MUW98_22090 PF04220 Der GTPase activator (YihI) MUW98_22095 PF00034 Cytochrome c MUW98_22100 PF01926 50S ribosome-binding GTPase MUW98_22105 PF07369 Protein of unknown function (DUF1488) MUW98_22110 PF08501 Shikimate dehydrogenase substrate binding domain MUW98_22110 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MUW98_22110 PF01488 Shikimate / quinate 5-dehydrogenase MUW98_22115 PF01218 Coproporphyrinogen III oxidase MUW98_22120 PF01300 Telomere recombination MUW98_22125 PF00731 AIR carboxylase MUW98_22130 PF01396 Topoisomerase DNA binding C4 zinc finger MUW98_22135 PF04361 Protein of unknown function (DUF494) MUW98_22140 PF02481 DNA recombination-mediator protein A MUW98_22140 PF17782 DprA winged helix domain MUW98_22150 PF01327 Polypeptide deformylase MUW98_22155 PF02911 Formyl transferase, C-terminal domain MUW98_22155 PF00551 Formyl transferase MUW98_22160 PF01029 NusB family MUW98_22160 PF01189 16S rRNA methyltransferase RsmB/F MUW98_22165 PF02080 TrkA-C domain MUW98_22165 PF02254 TrkA-N domain MUW98_22170 PF02386 Cation transport protein MUW98_22175 PF02646 RmuC family MUW98_22190 PF02082 Transcriptional regulator MUW98_22195 PF00294 pfkB family carbohydrate kinase MUW98_22200 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MUW98_22200 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MUW98_22205 PF00958 GMP synthase C terminal domain MUW98_22205 PF02540 NAD synthase MUW98_22205 PF00117 Glutamine amidotransferase class-I MUW98_22210 PF00171 Aldehyde dehydrogenase family MUW98_22215 PF00202 Aminotransferase class-III MUW98_22220 PF07883 Cupin domain MUW98_22220 PF01381 Helix-turn-helix MUW98_22225 PF00171 Aldehyde dehydrogenase family MUW98_22235 PF00892 EamA-like transporter family MUW98_22240 PF12833 Helix-turn-helix domain MUW98_22245 PF01810 LysE type translocator MUW98_22250 PF00690 Cation transporter/ATPase, N-terminus MUW98_22250 PF00689 Cation transporting ATPase, C-terminus MUW98_22255 PF00672 HAMP domain MUW98_22255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_22255 PF12729 Four helix bundle sensory module for signal transduction MUW98_22260 PF04143 Sulphur transport MUW98_22265 PF01810 LysE type translocator MUW98_22275 PF06206 CpeT/CpcT family (DUF1001) MUW98_22300 PF14001 YdfZ protein MUW98_22320 PF03466 LysR substrate binding domain MUW98_22320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_22340 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system MUW98_22345 PF00580 UvrD/REP helicase N-terminal domain MUW98_22345 PF13361 UvrD-like helicase C-terminal domain MUW98_22360 PF02608 ABC transporter substrate-binding protein PnrA-like MUW98_22365 PF00005 ABC transporter MUW98_22370 PF02653 Branched-chain amino acid transport system / permease component MUW98_22375 PF02653 Branched-chain amino acid transport system / permease component MUW98_22380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_22380 PF03466 LysR substrate binding domain MUW98_22385 PF00107 Zinc-binding dehydrogenase MUW98_22385 PF08240 Alcohol dehydrogenase GroES-like domain MUW98_22390 PF00756 Putative esterase MUW98_22400 PF03781 Sulfatase-modifying factor enzyme 1 MUW98_22400 PF12867 DinB superfamily MUW98_22405 PF13593 SBF-like CPA transporter family (DUF4137) MUW98_22410 PF13520 Amino acid permease MUW98_22415 PF01588 Putative tRNA binding domain MUW98_22420 PF13520 Amino acid permease MUW98_22425 PF04074 YhcH/YjgK/YiaL MUW98_22430 PF02929 Beta galactosidase small chain MUW98_22430 PF16353 Domain of unknown function(DUF4981) MUW98_22430 PF00703 Glycosyl hydrolases family 2 MUW98_22430 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MUW98_22430 PF02837 Glycosyl hydrolases family 2, sugar binding domain MUW98_22435 PF00356 Bacterial regulatory proteins, lacI family MUW98_22470 PF00132 Bacterial transferase hexapeptide (six repeats) MUW98_22475 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MUW98_22475 PF01612 3'-5' exonuclease MUW98_22475 PF00476 DNA polymerase family A MUW98_22475 PF01367 5'-3' exonuclease, C-terminal SAM fold MUW98_22485 PF06005 Cell division protein ZapB MUW98_22495 PF06426 Serine acetyltransferase, N-terminal MUW98_22495 PF00132 Bacterial transferase hexapeptide (six repeats) MUW98_22500 PF16916 Dimerisation domain of Zinc Transporter MUW98_22500 PF01545 Cation efflux family MUW98_22505 PF00486 Transcriptional regulatory protein, C terminal MUW98_22505 PF00072 Response regulator receiver domain MUW98_22510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_22510 PF16527 Two-component sensor protein CpxA, periplasmic domain MUW98_22510 PF00512 His Kinase A (phospho-acceptor) domain MUW98_22510 PF00672 HAMP domain MUW98_22515 PF00588 SpoU rRNA Methylase family MUW98_22520 PF01554 MatE MUW98_22525 PF02630 SCO1/SenC MUW98_22535 PF00717 Peptidase S24-like MUW98_22535 PF01726 LexA DNA binding domain MUW98_22540 PF01553 Acyltransferase MUW98_22545 PF01040 UbiA prenyltransferase family MUW98_22550 PF04345 Chorismate lyase MUW98_22555 PF03748 Flagellar basal body-associated protein FliL MUW98_22570 PF00107 Zinc-binding dehydrogenase MUW98_22570 PF08240 Alcohol dehydrogenase GroES-like domain MUW98_22575 PF00356 Bacterial regulatory proteins, lacI family MUW98_22575 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MUW98_22580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MUW98_22590 PF03611 PTS system sugar-specific permease component MUW98_22595 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) MUW98_22600 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MUW98_22605 PF00535 Glycosyl transferase family 2 MUW98_22610 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MUW98_22615 PF01467 Cytidylyltransferase-like MUW98_22620 PF04393 Protein of unknown function (DUF535) MUW98_22625 PF06827 Zinc finger found in FPG and IleRS MUW98_22625 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MUW98_22625 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MUW98_22635 PF00471 Ribosomal protein L33 MUW98_22640 PF00830 Ribosomal L28 family MUW98_22645 PF04002 RadC-like JAB domain MUW98_22650 PF02441 Flavoprotein MUW98_22650 PF04127 DNA / pantothenate metabolism flavoprotein MUW98_22655 PF00692 dUTPase MUW98_22660 PF00440 Bacterial regulatory proteins, tetR family MUW98_22665 PF00924 Mechanosensitive ion channel MUW98_22665 PF05552 Conserved TM helix MUW98_22675 PF00342 Phosphoglucose isomerase MUW98_22680 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MUW98_22680 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MUW98_22685 PF03466 LysR substrate binding domain MUW98_22685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MUW98_22700 PF13380 CoA binding domain MUW98_22700 PF13607 Succinyl-CoA ligase like flavodoxin domain MUW98_22700 PF00583 Acetyltransferase (GNAT) family MUW98_22730 PF12724 Flavodoxin domain MUW98_22735 PF02386 Cation transport protein MUW98_22740 PF09186 Domain of unknown function (DUF1949) MUW98_22740 PF01205 Uncharacterized protein family UPF0029 MUW98_22745 PF00557 Metallopeptidase family M24 MUW98_22750 PF00501 AMP-binding enzyme MUW98_22750 PF13193 AMP-binding enzyme C-terminal domain MUW98_22755 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MUW98_22755 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MUW98_22755 PF00378 Enoyl-CoA hydratase/isomerase MUW98_22760 PF02803 Thiolase, C-terminal domain MUW98_22760 PF00108 Thiolase, N-terminal domain MUW98_22765 PF00072 Response regulator receiver domain MUW98_22765 PF00486 Transcriptional regulatory protein, C terminal MUW98_22770 PF00672 HAMP domain MUW98_22770 PF00512 His Kinase A (phospho-acceptor) domain MUW98_22770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_22775 PF01547 Bacterial extracellular solute-binding protein MUW98_22785 PF01206 Sulfurtransferase TusA MUW98_22790 PF01042 Endoribonuclease L-PSP MUW98_22795 PF13488 Glycine zipper MUW98_22795 PF00691 OmpA family MUW98_22800 PF00672 HAMP domain MUW98_22800 PF02743 Cache domain MUW98_22800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_22805 PF03352 Methyladenine glycosylase MUW98_22810 PF02091 Glycyl-tRNA synthetase alpha subunit MUW98_22815 PF02092 Glycyl-tRNA synthetase beta subunit MUW98_22815 PF05746 DALR anticodon binding domain MUW98_22830 PF00625 Guanylate kinase MUW98_22850 PF03222 Tryptophan/tyrosine permease family MUW98_22855 PF12801 4Fe-4S binding domain MUW98_22865 PF07992 Pyridine nucleotide-disulphide oxidoreductase MUW98_22865 PF18113 Rubredoxin binding C-terminal domain MUW98_22870 PF00258 Flavodoxin MUW98_22870 PF00301 Rubredoxin MUW98_22870 PF00753 Metallo-beta-lactamase superfamily MUW98_22875 PF00158 Sigma-54 interaction domain MUW98_22875 PF01590 GAF domain MUW98_22880 PF07702 UTRA domain MUW98_22880 PF00392 Bacterial regulatory proteins, gntR family MUW98_22885 PF00367 phosphotransferase system, EIIB MUW98_22885 PF02378 Phosphotransferase system, EIIC MUW98_22890 PF02056 Family 4 glycosyl hydrolase MUW98_22890 PF11975 Family 4 glycosyl hydrolase C-terminal domain MUW98_22895 PF00356 Bacterial regulatory proteins, lacI family MUW98_22900 PF13458 Periplasmic binding protein MUW98_22905 PF02653 Branched-chain amino acid transport system / permease component MUW98_22910 PF02653 Branched-chain amino acid transport system / permease component MUW98_22910 PF11862 Domain of unknown function (DUF3382) MUW98_22915 PF12399 Branched-chain amino acid ATP-binding cassette transporter MUW98_22915 PF00005 ABC transporter MUW98_22920 PF00005 ABC transporter MUW98_22935 PF00581 Rhodanese-like domain MUW98_22940 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease MUW98_22940 PF01694 Rhomboid family MUW98_22950 PF04380 Membrane fusogenic activity MUW98_22955 PF00175 Oxidoreductase NAD-binding domain MUW98_22960 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase MUW98_22970 PF07498 Rho termination factor, N-terminal domain MUW98_22970 PF07497 Rho termination factor, RNA-binding domain MUW98_22970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MUW98_22975 PF00085 Thioredoxin MUW98_22980 PF00270 DEAD/DEAH box helicase MUW98_22980 PF00271 Helicase conserved C-terminal domain MUW98_22985 PF02541 Ppx/GppA phosphatase family MUW98_22995 PF04445 Putative SAM-dependent methyltransferase MUW98_23000 PF00563 EAL domain MUW98_23000 PF00990 Diguanylate cyclase, GGDEF domain MUW98_23000 PF03707 Bacterial signalling protein N terminal repeat MUW98_23005 PF01432 Peptidase family M3 MUW98_23010 PF00490 Delta-aminolevulinic acid dehydratase MUW98_23015 PF01026 TatD related DNase MUW98_23020 PF00902 Sec-independent protein translocase protein (TatC) MUW98_23025 PF02416 mttA/Hcf106 family MUW98_23030 PF02416 mttA/Hcf106 family MUW98_23035 PF03109 ABC1 family MUW98_23040 PF02036 SCP-2 sterol transfer family MUW98_23045 PF01209 ubiE/COQ5 methyltransferase family MUW98_23050 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MUW98_23055 PF07969 Amidohydrolase family MUW98_23100 PF03544 Gram-negative bacterial TonB protein C-terminal MUW98_23105 PF02472 Biopolymer transport protein ExbD/TolR MUW98_23110 PF01618 MotA/TolQ/ExbB proton channel family MUW98_23115 PF01618 MotA/TolQ/ExbB proton channel family MUW98_23125 PF03472 Autoinducer binding domain MUW98_23125 PF00196 Bacterial regulatory proteins, luxR family MUW98_23130 PF01380 SIS domain MUW98_23135 PF00455 DeoR C terminal sensor domain MUW98_23135 PF08220 DeoR-like helix-turn-helix domain MUW98_23140 PF00486 Transcriptional regulatory protein, C terminal MUW98_23140 PF00072 Response regulator receiver domain MUW98_23145 PF00672 HAMP domain MUW98_23145 PF00512 His Kinase A (phospho-acceptor) domain MUW98_23145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MUW98_23150 PF00905 Penicillin binding protein transpeptidase domain MUW98_23155 PF06123 Inner membrane protein CreD MUW98_23160 PF12804 MobA-like NTP transferase domain MUW98_23160 PF14602 Hexapeptide repeat of succinyl-transferase MUW98_23160 PF00132 Bacterial transferase hexapeptide (six repeats) MUW98_23165 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain MUW98_23165 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MUW98_23170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MUW98_23170 PF02874 ATP synthase alpha/beta family, beta-barrel domain MUW98_23175 PF00231 ATP synthase MUW98_23180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MUW98_23180 PF00306 ATP synthase alpha/beta chain, C terminal domain MUW98_23180 PF02874 ATP synthase alpha/beta family, beta-barrel domain MUW98_23185 PF00213 ATP synthase delta (OSCP) subunit MUW98_23190 PF00430 ATP synthase B/B' CF(0) MUW98_23195 PF00137 ATP synthase subunit C MUW98_23200 PF00119 ATP synthase A chain MUW98_23210 PF17762 HTH domain found in ParB protein MUW98_23210 PF02195 ParB-like nuclease domain MUW98_23215 PF13614 AAA domain MUW98_23220 PF02527 rRNA small subunit methyltransferase G MUW98_23225 PF01134 Glucose inhibited division protein A MUW98_23225 PF13932 GidA associated domain MUW98_23230 PF00258 Flavodoxin MUW98_23235 PF00593 TonB dependent receptor MUW98_23235 PF07715 TonB-dependent Receptor Plug Domain MUW98_23240 PF00005 ABC transporter MUW98_23245 PF00005 ABC transporter MUW98_23255 PF01032 FecCD transport family MUW98_23260 PF12631 MnmE helical domain MUW98_23260 PF01926 50S ribosome-binding GTPase MUW98_23260 PF10396 GTP-binding protein TrmE N-terminus MUW98_23265 PF02096 60Kd inner membrane protein MUW98_23265 PF14849 YidC periplasmic domain MUW98_23270 PF01809 Putative membrane protein insertion efficiency factor MUW98_23275 PF00825 Ribonuclease P MUW98_23280 PF00468 Ribosomal protein L34 MUW98_23285 PF00005 ABC transporter MUW98_23290 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_23295 PF00497 Bacterial extracellular solute-binding proteins, family 3 MUW98_23345 PF02796 Helix-turn-helix domain of resolvase MUW98_23345 PF00239 Resolvase, N terminal domain MUW98_23390 PF00816 H-NS histone family MUW98_23395 PF05818 Enterobacterial TraT complement resistance protein MUW98_23450 PF17762 HTH domain found in ParB protein MUW98_23450 PF02195 ParB-like nuclease domain MUW98_23465 PF01609 Transposase DDE domain MUW98_23465 PF05598 Transposase domain (DUF772) MUW98_23480 PF00196 Bacterial regulatory proteins, luxR family MUW98_23485 PF10627 Curli assembly protein CsgE MUW98_23495 PF03783 Curli production assembly/transport component CsgG MUW98_23575 PF18340 DNA relaxase TraI 2B/2B-like domain MUW98_23575 PF18272 single-stranded DNA binding TraI N-terminal subdomain MUW98_23575 PF08751 TrwC relaxase MUW98_23575 PF07057 DNA helicase TraI MUW98_23620 PF06834 TraU protein MUW98_23645 PF05598 Transposase domain (DUF772) MUW98_23645 PF01609 Transposase DDE domain MUW98_23650 PF07091 Ribosomal RNA methyltransferase (FmrO) MUW98_23710 PF13614 AAA domain MUW98_23715 PF02195 ParB-like nuclease domain MUW98_23715 PF08535 KorB domain MUW98_23715 PF06613 KorB C-terminal beta-barrel domain MUW98_23760 PF00589 Phage integrase family MUW98_23780 PF01526 Tn3 transposase DDE domain MUW98_23780 PF13700 Domain of unknown function (DUF4158) MUW98_23785 PF00239 Resolvase, N terminal domain MUW98_23785 PF02796 Helix-turn-helix domain of resolvase MUW98_23795 PF00816 H-NS histone family MUW98_23820 PF00528 Binding-protein-dependent transport system inner membrane component MUW98_23825 PF09383 NIL domain MUW98_23825 PF00005 ABC transporter MUW98_23830 PF03180 NLPA lipoprotein MUW98_23850 PF02796 Helix-turn-helix domain of resolvase MUW98_23850 PF00239 Resolvase, N terminal domain MUW98_23865 PF08447 PAS fold MUW98_23865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_23870 PF13592 Winged helix-turn helix MUW98_23870 PF13358 DDE superfamily endonuclease MUW98_23875 PF02796 Helix-turn-helix domain of resolvase MUW98_23875 PF00239 Resolvase, N terminal domain MUW98_23880 PF13700 Domain of unknown function (DUF4158) MUW98_23880 PF01526 Tn3 transposase DDE domain MUW98_23895 PF00239 Resolvase, N terminal domain MUW98_23895 PF02796 Helix-turn-helix domain of resolvase MUW98_23905 PF02796 Helix-turn-helix domain of resolvase MUW98_23905 PF00239 Resolvase, N terminal domain MUW98_23915 PF18273 Type III R-M EcoP15I C-terminal domain MUW98_23915 PF01555 DNA methylase MUW98_23920 PF04851 Type III restriction enzyme, res subunit MUW98_23920 PF08774 VRR-NUC domain MUW98_23930 PF01848 Hok/gef family MUW98_23960 PF04002 RadC-like JAB domain MUW98_23980 PF01555 DNA methylase MUW98_23995 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A MUW98_24010 PF01464 Transglycosylase SLT domain MUW98_24020 PF18340 DNA relaxase TraI 2B/2B-like domain MUW98_24020 PF08751 TrwC relaxase MUW98_24020 PF18272 single-stranded DNA binding TraI N-terminal subdomain MUW98_24020 PF07057 DNA helicase TraI MUW98_24025 PF12615 F sex factor protein N terminal MUW98_24025 PF10412 Type IV secretion-system coupling protein DNA-binding domain MUW98_24030 PF05818 Enterobacterial TraT complement resistance protein MUW98_24040 PF07916 TraG-like protein, N-terminal region MUW98_24045 PF06122 Conjugative relaxosome accessory transposon protein MUW98_24050 PF13728 F plasmid transfer operon protein MUW98_24060 PF13728 F plasmid transfer operon protein MUW98_24065 PF06986 Type-1V conjugative transfer system mating pair stabilisation MUW98_24070 PF09673 Type-F conjugative transfer system pilin assembly protein MUW98_24075 PF06834 TraU protein MUW98_24080 PF12477 Sex factor F TraW protein N terminal MUW98_24090 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer MUW98_24095 PF09676 Type IV conjugative transfer system lipoprotein (TraV) MUW98_24100 PF03743 Bacterial conjugation TrbI-like protein MUW98_24110 PF05309 TraE protein MUW98_24115 PF07178 TraL protein MUW98_24120 PF05513 TraA MUW98_24145 PF13614 AAA domain MUW98_24200 PF04381 Putative exonuclease, RdgC MUW98_24215 PF01555 DNA methylase MUW98_24245 PF02413 Caudovirales tail fibre assembly protein, lambda gpK MUW98_24270 PF03864 Phage major capsid protein E MUW98_24385 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MUW98_24385 PF00533 BRCA1 C Terminus (BRCT) domain MUW98_24385 PF03120 NAD-dependent DNA ligase OB-fold domain MUW98_24385 PF12826 Helix-hairpin-helix motif MUW98_24385 PF01653 NAD-dependent DNA ligase adenylation domain MUW98_24415 PF00196 Bacterial regulatory proteins, luxR family MUW98_24415 PF03472 Autoinducer binding domain MUW98_24440 PF18090 Centromere-binding protein HTH domain MUW98_24440 PF02195 ParB-like nuclease domain MUW98_24445 PF13614 AAA domain MUW98_24475 PF01751 Toprim domain MUW98_24475 PF01131 DNA topoisomerase MUW98_24505 PF00816 H-NS histone family MUW98_24520 PF00437 Type II/IV secretion system protein MUW98_24535 PF02796 Helix-turn-helix domain of resolvase MUW98_24535 PF00239 Resolvase, N terminal domain MUW98_24550 PF13614 AAA domain MUW98_24600 PF03135 CagE, TrbE, VirB family, component of type IV transporter system MUW98_24625 PF03524 Conjugal transfer protein MUW98_24635 PF03743 Bacterial conjugation TrbI-like protein MUW98_24640 PF10502 Signal peptidase, peptidase S26 MUW98_24665 PF00437 Type II/IV secretion system protein MUW98_24700 PF05713 Bacterial mobilisation protein (MobC) MUW98_24750 PF02583 Metal-sensitive transcriptional repressor MUW98_24760 PF01022 Bacterial regulatory protein, arsR family MUW98_24765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MUW98_24765 PF08447 PAS fold MUW98_24775 PF02796 Helix-turn-helix domain of resolvase MUW98_24775 PF00239 Resolvase, N terminal domain MUW98_24780 PF01526 Tn3 transposase DDE domain MUW98_24780 PF13700 Domain of unknown function (DUF4158) MUW98_24805 PF03389 MobA/MobL family MUW98_24805 PF16793 RepB DNA-primase from phage plasmid