locus-tag class description HQK30_00005 PF08299 Bacterial dnaA protein helix-turn-helix HQK30_00005 PF11638 DnaA N-terminal domain HQK30_00005 PF00308 Bacterial dnaA protein HQK30_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HQK30_00010 PF02767 DNA polymerase III beta subunit, central domain HQK30_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HQK30_00015 PF02463 RecF/RecN/SMC N terminal domain HQK30_00020 PF18053 DNA gyrase B subunit insert domain HQK30_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_00020 PF01751 Toprim domain HQK30_00020 PF00986 DNA gyrase B subunit, carboxyl terminus HQK30_00020 PF00204 DNA gyrase B HQK30_00030 PF06689 ClpX C4-type zinc finger HQK30_00030 PF10431 C-terminal, D2-small domain, of ClpB protein HQK30_00030 PF07724 AAA domain (Cdc48 subfamily) HQK30_00100 PF08279 HTH domain HQK30_00100 PF13280 WYL domain HQK30_00105 PF00011 Hsp20/alpha crystallin family HQK30_00110 PF00011 Hsp20/alpha crystallin family HQK30_00115 PF00155 Aminotransferase class I and II HQK30_00130 PF07690 Major Facilitator Superfamily HQK30_00135 PF00072 Response regulator receiver domain HQK30_00135 PF00486 Transcriptional regulatory protein, C terminal HQK30_00140 PF13492 GAF domain HQK30_00140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_00140 PF13493 Domain of unknown function (DUF4118) HQK30_00140 PF00512 His Kinase A (phospho-acceptor) domain HQK30_00140 PF02702 Osmosensitive K+ channel His kinase sensor domain HQK30_00145 PF02669 K+-transporting ATPase, c chain HQK30_00155 PF03814 Potassium-transporting ATPase A subunit HQK30_00165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQK30_00165 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQK30_00170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_00170 PF00512 His Kinase A (phospho-acceptor) domain HQK30_00170 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQK30_00175 PF00873 AcrB/AcrD/AcrF family HQK30_00180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HQK30_00185 PF00440 Bacterial regulatory proteins, tetR family HQK30_00220 PF07690 Major Facilitator Superfamily HQK30_00230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_00230 PF00672 HAMP domain HQK30_00230 PF00512 His Kinase A (phospho-acceptor) domain HQK30_00235 PF14532 Sigma-54 interaction domain HQK30_00235 PF02954 Bacterial regulatory protein, Fis family HQK30_00235 PF00072 Response regulator receiver domain HQK30_00245 PF12146 Serine aminopeptidase, S33 HQK30_00250 PF00132 Bacterial transferase hexapeptide (six repeats) HQK30_00255 PF12105 SpoU, rRNA methylase, C-terminal HQK30_00255 PF00588 SpoU rRNA Methylase family HQK30_00260 PF02824 TGS domain HQK30_00260 PF04607 Region found in RelA / SpoT proteins HQK30_00260 PF13291 ACT domain HQK30_00265 PF01192 RNA polymerase Rpb6 HQK30_00270 PF00625 Guanylate kinase HQK30_00275 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HQK30_00290 PF00892 EamA-like transporter family HQK30_00310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_00310 PF03466 LysR substrate binding domain HQK30_00315 PF00579 tRNA synthetases class I (W and Y) HQK30_00320 PF00582 Universal stress protein family HQK30_00325 PF07055 Enoyl reductase FAD binding domain HQK30_00325 PF12241 Trans-2-enoyl-CoA reductase catalytic region HQK30_00325 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HQK30_00330 PF00990 Diguanylate cyclase, GGDEF domain HQK30_00335 PF00210 Ferritin-like domain HQK30_00345 PF07690 Major Facilitator Superfamily HQK30_00350 PF01810 LysE type translocator HQK30_00365 PF16967 E-set like domain HQK30_00365 PF15976 CS1-pili formation C-terminal HQK30_00370 PF18649 EcpB C-terminal domain HQK30_00375 PF16449 Fimbrillin MatB HQK30_00380 PF00196 Bacterial regulatory proteins, luxR family HQK30_00380 PF00072 Response regulator receiver domain HQK30_00385 PF00072 Response regulator receiver domain HQK30_00385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_00385 PF00512 His Kinase A (phospho-acceptor) domain HQK30_00385 PF01627 Hpt domain HQK30_00385 PF00989 PAS fold HQK30_00385 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQK30_00395 PF06580 Histidine kinase HQK30_00395 PF07694 5TMR of 5TMR-LYT HQK30_00395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_00400 PF00072 Response regulator receiver domain HQK30_00400 PF04397 LytTr DNA-binding domain HQK30_00405 PF07690 Major Facilitator Superfamily HQK30_00410 PF02222 ATP-grasp domain HQK30_00410 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HQK30_00415 PF00731 AIR carboxylase HQK30_00430 PF03466 LysR substrate binding domain HQK30_00430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_00435 PF07715 TonB-dependent Receptor Plug Domain HQK30_00435 PF00593 TonB dependent receptor HQK30_00440 PF01177 Asp/Glu/Hydantoin racemase HQK30_00470 PF13607 Succinyl-CoA ligase like flavodoxin domain HQK30_00470 PF13380 CoA binding domain HQK30_00470 PF00583 Acetyltransferase (GNAT) family HQK30_00485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_00485 PF03466 LysR substrate binding domain HQK30_00490 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HQK30_00490 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HQK30_00495 PF00342 Phosphoglucose isomerase HQK30_00505 PF00924 Mechanosensitive ion channel HQK30_00505 PF05552 Conserved TM helix HQK30_00510 PF00440 Bacterial regulatory proteins, tetR family HQK30_00515 PF00692 dUTPase HQK30_00520 PF02441 Flavoprotein HQK30_00520 PF04127 DNA / pantothenate metabolism flavoprotein HQK30_00525 PF04002 RadC-like JAB domain HQK30_00530 PF00830 Ribosomal L28 family HQK30_00535 PF00471 Ribosomal protein L33 HQK30_00545 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HQK30_00545 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HQK30_00545 PF06827 Zinc finger found in FPG and IleRS HQK30_00550 PF04393 Protein of unknown function (DUF535) HQK30_00555 PF01467 Cytidylyltransferase-like HQK30_00560 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HQK30_00565 PF00535 Glycosyl transferase family 2 HQK30_00570 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HQK30_00575 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HQK30_00580 PF03611 PTS system sugar-specific permease component HQK30_00590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HQK30_00595 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HQK30_00595 PF00356 Bacterial regulatory proteins, lacI family HQK30_00600 PF00107 Zinc-binding dehydrogenase HQK30_00600 PF08240 Alcohol dehydrogenase GroES-like domain HQK30_00615 PF03748 Flagellar basal body-associated protein FliL HQK30_00620 PF04345 Chorismate lyase HQK30_00625 PF01040 UbiA prenyltransferase family HQK30_00630 PF01553 Acyltransferase HQK30_00635 PF01726 LexA DNA binding domain HQK30_00635 PF00717 Peptidase S24-like HQK30_00645 PF02630 SCO1/SenC HQK30_00650 PF01554 MatE HQK30_00655 PF00588 SpoU rRNA Methylase family HQK30_00660 PF16527 Two-component sensor protein CpxA, periplasmic domain HQK30_00660 PF00672 HAMP domain HQK30_00660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_00660 PF00512 His Kinase A (phospho-acceptor) domain HQK30_00665 PF00486 Transcriptional regulatory protein, C terminal HQK30_00665 PF00072 Response regulator receiver domain HQK30_00670 PF01545 Cation efflux family HQK30_00670 PF16916 Dimerisation domain of Zinc Transporter HQK30_00675 PF06426 Serine acetyltransferase, N-terminal HQK30_00675 PF00132 Bacterial transferase hexapeptide (six repeats) HQK30_00685 PF06005 Cell division protein ZapB HQK30_00695 PF01612 3'-5' exonuclease HQK30_00695 PF00476 DNA polymerase family A HQK30_00695 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HQK30_00695 PF01367 5'-3' exonuclease, C-terminal SAM fold HQK30_00700 PF00132 Bacterial transferase hexapeptide (six repeats) HQK30_00735 PF00356 Bacterial regulatory proteins, lacI family HQK30_00740 PF00703 Glycosyl hydrolases family 2 HQK30_00740 PF16353 Domain of unknown function(DUF4981) HQK30_00740 PF02929 Beta galactosidase small chain HQK30_00740 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HQK30_00740 PF02837 Glycosyl hydrolases family 2, sugar binding domain HQK30_00745 PF04074 YhcH/YjgK/YiaL HQK30_00750 PF13520 Amino acid permease HQK30_00755 PF01588 Putative tRNA binding domain HQK30_00760 PF13520 Amino acid permease HQK30_00765 PF13593 SBF-like CPA transporter family (DUF4137) HQK30_00770 PF12867 DinB superfamily HQK30_00770 PF03781 Sulfatase-modifying factor enzyme 1 HQK30_00780 PF00756 Putative esterase HQK30_00785 PF08240 Alcohol dehydrogenase GroES-like domain HQK30_00785 PF00107 Zinc-binding dehydrogenase HQK30_00790 PF03466 LysR substrate binding domain HQK30_00790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_00815 PF00580 UvrD/REP helicase N-terminal domain HQK30_00815 PF13361 UvrD-like helicase C-terminal domain HQK30_00830 PF06114 IrrE N-terminal-like domain HQK30_00860 PF03466 LysR substrate binding domain HQK30_00860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_00870 PF14001 YdfZ protein HQK30_00905 PF06206 CpeT/CpcT family (DUF1001) HQK30_00915 PF01810 LysE type translocator HQK30_00925 PF04143 Sulphur transport HQK30_00930 PF00690 Cation transporter/ATPase, N-terminus HQK30_00930 PF00689 Cation transporting ATPase, C-terminus HQK30_00935 PF01810 LysE type translocator HQK30_00940 PF12833 Helix-turn-helix domain HQK30_00945 PF00892 EamA-like transporter family HQK30_00955 PF00171 Aldehyde dehydrogenase family HQK30_00960 PF01381 Helix-turn-helix HQK30_00960 PF07883 Cupin domain HQK30_00965 PF00202 Aminotransferase class-III HQK30_00970 PF00171 Aldehyde dehydrogenase family HQK30_00975 PF00117 Glutamine amidotransferase class-I HQK30_00975 PF02540 NAD synthase HQK30_00975 PF00958 GMP synthase C terminal domain HQK30_00980 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HQK30_00980 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HQK30_00985 PF00294 pfkB family carbohydrate kinase HQK30_00990 PF02082 Transcriptional regulator HQK30_01005 PF02646 RmuC family HQK30_01010 PF02386 Cation transport protein HQK30_01015 PF02254 TrkA-N domain HQK30_01015 PF02080 TrkA-C domain HQK30_01020 PF01029 NusB family HQK30_01020 PF01189 16S rRNA methyltransferase RsmB/F HQK30_01025 PF02911 Formyl transferase, C-terminal domain HQK30_01025 PF00551 Formyl transferase HQK30_01030 PF01327 Polypeptide deformylase HQK30_01040 PF02481 DNA recombination-mediator protein A HQK30_01040 PF17782 DprA winged helix domain HQK30_01045 PF04361 Protein of unknown function (DUF494) HQK30_01050 PF01396 Topoisomerase DNA binding C4 zinc finger HQK30_01055 PF00731 AIR carboxylase HQK30_01060 PF01300 Telomere recombination HQK30_01065 PF01218 Coproporphyrinogen III oxidase HQK30_01070 PF01488 Shikimate / quinate 5-dehydrogenase HQK30_01070 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HQK30_01070 PF08501 Shikimate dehydrogenase substrate binding domain HQK30_01075 PF07369 Protein of unknown function (DUF1488) HQK30_01080 PF01926 50S ribosome-binding GTPase HQK30_01085 PF00034 Cytochrome c HQK30_01090 PF04220 Der GTPase activator (YihI) HQK30_01095 PF10675 Protein of unknown function (DUF2489) HQK30_01100 PF06969 HemN C-terminal domain HQK30_01100 PF04055 Radical SAM superfamily HQK30_01105 PF00962 Adenosine/AMP deaminase HQK30_01110 PF00072 Response regulator receiver domain HQK30_01110 PF00158 Sigma-54 interaction domain HQK30_01110 PF02954 Bacterial regulatory protein, Fis family HQK30_01115 PF00512 His Kinase A (phospho-acceptor) domain HQK30_01115 PF00989 PAS fold HQK30_01115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_01125 PF03951 Glutamine synthetase, beta-Grasp domain HQK30_01125 PF00120 Glutamine synthetase, catalytic domain HQK30_01135 PF03631 Virulence factor BrkB HQK30_01140 PF03631 Virulence factor BrkB HQK30_01145 PF02580 D-Tyr-tRNA(Tyr) deacylase HQK30_01155 PF00583 Acetyltransferase (GNAT) family HQK30_01155 PF09500 Putative thioesterase (yiiD_Cterm) HQK30_01165 PF17191 RecG wedge domain HQK30_01165 PF00270 DEAD/DEAH box helicase HQK30_01165 PF00271 Helicase conserved C-terminal domain HQK30_01170 PF13091 PLD-like domain HQK30_01175 PF02447 GntP family permease HQK30_01180 PF01202 Shikimate kinase HQK30_01185 PF00920 Dehydratase family HQK30_01190 PF01081 KDPG and KHG aldolase HQK30_01195 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HQK30_01195 PF00356 Bacterial regulatory proteins, lacI family HQK30_01205 PF01551 Peptidase family M23 HQK30_01210 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HQK30_01210 PF01676 Metalloenzyme superfamily HQK30_01215 PF00581 Rhodanese-like domain HQK30_01220 PF02556 Preprotein translocase subunit SecB HQK30_01225 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HQK30_01225 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HQK30_01230 PF01106 NifU-like domain HQK30_01230 PF01521 Iron-sulphur cluster biosynthesis HQK30_01240 PF00561 alpha/beta hydrolase fold HQK30_01260 PF00575 S1 RNA binding domain HQK30_01260 PF17674 HHH domain HQK30_01260 PF09371 Tex-like protein N-terminal domain HQK30_01260 PF16921 Tex protein YqgF-like domain HQK30_01265 PF03449 Transcription elongation factor, N-terminal HQK30_01265 PF01272 Transcription elongation factor, GreA/GreB, C-term HQK30_01270 PF00486 Transcriptional regulatory protein, C terminal HQK30_01270 PF00072 Response regulator receiver domain HQK30_01275 PF00672 HAMP domain HQK30_01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_01275 PF00512 His Kinase A (phospho-acceptor) domain HQK30_01285 PF00338 Ribosomal protein S10p/S20e HQK30_01290 PF00297 Ribosomal protein L3 HQK30_01295 PF00573 Ribosomal protein L4/L1 family HQK30_01300 PF00276 Ribosomal protein L23 HQK30_01305 PF03947 Ribosomal Proteins L2, C-terminal domain HQK30_01305 PF00181 Ribosomal Proteins L2, RNA binding domain HQK30_01310 PF00203 Ribosomal protein S19 HQK30_01315 PF00237 Ribosomal protein L22p/L17e HQK30_01320 PF00189 Ribosomal protein S3, C-terminal domain HQK30_01320 PF07650 KH domain HQK30_01325 PF00252 Ribosomal protein L16p/L10e HQK30_01330 PF00831 Ribosomal L29 protein HQK30_01335 PF00366 Ribosomal protein S17 HQK30_01340 PF00238 Ribosomal protein L14p/L23e HQK30_01345 PF00467 KOW motif HQK30_01345 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HQK30_01350 PF00673 ribosomal L5P family C-terminus HQK30_01350 PF00281 Ribosomal protein L5 HQK30_01355 PF00253 Ribosomal protein S14p/S29e HQK30_01360 PF00410 Ribosomal protein S8 HQK30_01365 PF00347 Ribosomal protein L6 HQK30_01370 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HQK30_01375 PF03719 Ribosomal protein S5, C-terminal domain HQK30_01375 PF00333 Ribosomal protein S5, N-terminal domain HQK30_01380 PF00327 Ribosomal protein L30p/L7e HQK30_01385 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HQK30_01390 PF00344 SecY translocase HQK30_01395 PF00444 Ribosomal protein L36 HQK30_01400 PF00416 Ribosomal protein S13/S18 HQK30_01405 PF00411 Ribosomal protein S11 HQK30_01410 PF01479 S4 domain HQK30_01410 PF00163 Ribosomal protein S4/S9 N-terminal domain HQK30_01415 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HQK30_01415 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HQK30_01415 PF01000 RNA polymerase Rpb3/RpoA insert domain HQK30_01420 PF01196 Ribosomal protein L17 HQK30_01465 PF00999 Sodium/hydrogen exchanger family HQK30_01465 PF02254 TrkA-N domain HQK30_01470 PF02525 Flavodoxin-like fold HQK30_01475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_01475 PF03466 LysR substrate binding domain HQK30_01480 PF00106 short chain dehydrogenase HQK30_01495 PF00326 Prolyl oligopeptidase family HQK30_01495 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HQK30_01500 PF16868 NMT1-like family HQK30_01515 PF07947 YhhN family HQK30_01520 PF07690 Major Facilitator Superfamily HQK30_01525 PF13533 Biotin-lipoyl like HQK30_01530 PF03466 LysR substrate binding domain HQK30_01530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_01540 PF00375 Sodium:dicarboxylate symporter family HQK30_01545 PF10678 Protein of unknown function (DUF2492) HQK30_01550 PF01914 MarC family integral membrane protein HQK30_01555 PF03466 LysR substrate binding domain HQK30_01555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_01560 PF02416 mttA/Hcf106 family HQK30_01570 PF01464 Transglycosylase SLT domain HQK30_01580 PF13091 PLD-like domain HQK30_01590 PF00440 Bacterial regulatory proteins, tetR family HQK30_01610 PF00448 SRP54-type protein, GTPase domain HQK30_01610 PF02881 SRP54-type protein, helical bundle domain HQK30_01615 PF00005 ABC transporter HQK30_01620 PF18075 FtsX extracellular domain HQK30_01625 PF04545 Sigma-70, region 4 HQK30_01625 PF04542 Sigma-70 region 2 HQK30_01625 PF00140 Sigma-70 factor, region 1.2 HQK30_01630 PF00484 Carbonic anhydrase HQK30_01635 PF07702 UTRA domain HQK30_01635 PF00392 Bacterial regulatory proteins, gntR family HQK30_01640 PF01979 Amidohydrolase family HQK30_01645 PF00491 Arginase family HQK30_01650 PF17392 Urocanase C-terminal domain HQK30_01650 PF01175 Urocanase Rossmann-like domain HQK30_01650 PF17391 Urocanase N-terminal domain HQK30_01655 PF00221 Aromatic amino acid lyase HQK30_01660 PF01699 Sodium/calcium exchanger protein HQK30_01665 PF12792 CSS motif domain associated with EAL HQK30_01665 PF00563 EAL domain HQK30_01670 PF00563 EAL domain HQK30_01670 PF17157 Gammaproteobacterial periplasmic sensor domain HQK30_01670 PF00990 Diguanylate cyclase, GGDEF domain HQK30_01700 PF00263 Bacterial type II and III secretion system protein HQK30_01700 PF03958 Bacterial type II/III secretion system short domain HQK30_01715 PF00437 Type II/IV secretion system protein HQK30_01715 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HQK30_01720 PF00482 Type II secretion system (T2SS), protein F HQK30_01735 PF07963 Prokaryotic N-terminal methylation motif HQK30_01735 PF00114 Pilin (bacterial filament) HQK30_01740 PF14245 Type IV pilin PilA HQK30_01740 PF07963 Prokaryotic N-terminal methylation motif HQK30_01770 PF04085 rod shape-determining protein MreC HQK30_01775 PF04093 rod shape-determining protein MreD HQK30_01780 PF02545 Maf-like protein HQK30_01785 PF10150 Ribonuclease E/G family HQK30_01785 PF00575 S1 RNA binding domain HQK30_01790 PF13502 AsmA-like C-terminal region HQK30_01790 PF13116 Protein of unknown function HQK30_01805 PF00795 Carbon-nitrogen hydrolase HQK30_01810 PF01523 Putative modulator of DNA gyrase HQK30_01820 PF01914 MarC family integral membrane protein HQK30_01825 PF07690 Major Facilitator Superfamily HQK30_01835 PF00072 Response regulator receiver domain HQK30_01840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HQK30_01840 PF00072 Response regulator receiver domain HQK30_01840 PF00512 His Kinase A (phospho-acceptor) domain HQK30_01840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_01840 PF01627 Hpt domain HQK30_01840 PF00672 HAMP domain HQK30_01845 PF13581 Histidine kinase-like ATPase domain HQK30_01850 PF08678 Rsbr N terminal HQK30_01850 PF01740 STAS domain HQK30_01855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_01855 PF13426 PAS domain HQK30_01855 PF08447 PAS fold HQK30_01870 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) HQK30_01875 PF04228 Putative neutral zinc metallopeptidase HQK30_01885 PF08668 HDOD domain HQK30_01900 PF00999 Sodium/hydrogen exchanger family HQK30_01905 PF02574 Homocysteine S-methyltransferase HQK30_01905 PF02310 B12 binding domain HQK30_01905 PF02607 B12 binding domain HQK30_01905 PF02965 Vitamin B12 dependent methionine synthase, activation domain HQK30_01905 PF00809 Pterin binding enzyme HQK30_01910 PF18030 RimK PreATP-grasp domain HQK30_01910 PF08443 RimK-like ATP-grasp domain HQK30_01915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_01920 PF00072 Response regulator receiver domain HQK30_01920 PF00486 Transcriptional regulatory protein, C terminal HQK30_01935 PF03440 Aerolysin/Pertussis toxin (APT) domain HQK30_01935 PF01117 Aerolysin toxin HQK30_01940 PF05935 Arylsulfotransferase (ASST) HQK30_01940 PF17425 Arylsulfotransferase Ig-like domain HQK30_01945 PF01964 Radical SAM ThiC family HQK30_01945 PF13667 ThiC-associated domain HQK30_01950 PF02581 Thiamine monophosphate synthase HQK30_01955 PF00899 ThiF family HQK30_01965 PF05690 Thiazole biosynthesis protein ThiG HQK30_01970 PF06968 Biotin and Thiamin Synthesis associated domain HQK30_01970 PF04055 Radical SAM superfamily HQK30_01990 PF13036 Peptidoglycan-synthase activator LpoB HQK30_02010 PF00990 Diguanylate cyclase, GGDEF domain HQK30_02010 PF17151 Periplasmic sensor domain HQK30_02020 PF06055 Exopolysaccharide synthesis, ExoD HQK30_02035 PF08803 Putative mono-oxygenase ydhR HQK30_02040 PF01638 HxlR-like helix-turn-helix HQK30_02045 PF13508 Acetyltransferase (GNAT) domain HQK30_02045 PF00583 Acetyltransferase (GNAT) family HQK30_02065 PF07715 TonB-dependent Receptor Plug Domain HQK30_02065 PF00593 TonB dependent receptor HQK30_02080 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HQK30_02085 PF03692 Putative zinc- or iron-chelating domain HQK30_02095 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase HQK30_02100 PF02602 Uroporphyrinogen-III synthase HemD HQK30_02105 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HQK30_02105 PF03900 Porphobilinogen deaminase, C-terminal domain HQK30_02110 PF12633 Adenylate cyclase NT domain HQK30_02110 PF01295 Adenylate cyclase, class-I HQK30_02115 PF02230 Phospholipase/Carboxylesterase HQK30_02120 PF01491 Frataxin-like domain HQK30_02130 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HQK30_02130 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HQK30_02135 PF01678 Diaminopimelate epimerase HQK30_02145 PF02899 Phage integrase, N-terminal SAM-like domain HQK30_02145 PF00589 Phage integrase family HQK30_02150 PF13419 Haloacid dehalogenase-like hydrolase HQK30_02160 PF13545 Crp-like helix-turn-helix domain HQK30_02160 PF00027 Cyclic nucleotide-binding domain HQK30_02170 PF07722 Peptidase C26 HQK30_02190 PF00005 ABC transporter HQK30_02200 PF00994 Probable molybdopterin binding domain HQK30_02200 PF02464 Competence-damaged protein HQK30_02205 PF12072 Domain of unknown function (DUF3552) HQK30_02205 PF00013 KH domain HQK30_02205 PF01966 HD domain HQK30_02210 PF04204 Homoserine O-succinyltransferase HQK30_02220 PF01037 Lrp/AsnC ligand binding domain HQK30_02225 PF00884 Sulfatase HQK30_02240 PF16657 Maltogenic Amylase, C-terminal domain HQK30_02240 PF02903 Alpha amylase, N-terminal ig-like domain HQK30_02240 PF00128 Alpha amylase, catalytic domain HQK30_02245 PF02308 MgtC family HQK30_02265 PF00106 short chain dehydrogenase HQK30_02270 PF03577 Peptidase family C69 HQK30_02280 PF00465 Iron-containing alcohol dehydrogenase HQK30_02290 PF01053 Cys/Met metabolism PLP-dependent enzyme HQK30_02300 PF12793 Sugar transport-related sRNA regulator N-term HQK30_02300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQK30_02315 PF03280 Proteobacterial lipase chaperone protein HQK30_02320 PF00561 alpha/beta hydrolase fold HQK30_02330 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HQK30_02330 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HQK30_02335 PF02698 DUF218 domain HQK30_02340 PF01752 Collagenase HQK30_02340 PF08453 Peptidase family M9 N-terminal HQK30_02350 PF00419 Fimbrial protein HQK30_02360 PF13953 PapC C-terminal domain HQK30_02360 PF13954 PapC N-terminal domain HQK30_02360 PF00577 Outer membrane usher protein HQK30_02365 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HQK30_02365 PF02753 Pili assembly chaperone PapD, C-terminal domain HQK30_02370 PF00419 Fimbrial protein HQK30_02375 PF00419 Fimbrial protein HQK30_02385 PF00501 AMP-binding enzyme HQK30_02390 PF13378 Enolase C-terminal domain-like HQK30_02395 PF00378 Enoyl-CoA hydratase/isomerase HQK30_02400 PF12697 Alpha/beta hydrolase family HQK30_02405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQK30_02405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HQK30_02405 PF16582 Middle domain of thiamine pyrophosphate HQK30_02410 PF00425 chorismate binding enzyme HQK30_02415 PF01040 UbiA prenyltransferase family HQK30_02445 PF00271 Helicase conserved C-terminal domain HQK30_02445 PF03880 DbpA RNA binding domain HQK30_02445 PF00270 DEAD/DEAH box helicase HQK30_02450 PF07662 Na+ dependent nucleoside transporter C-terminus HQK30_02450 PF07670 Nucleoside recognition HQK30_02450 PF01773 Na+ dependent nucleoside transporter N-terminus HQK30_02455 PF04307 LexA-binding, inner membrane-associated putative hydrolase HQK30_02470 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HQK30_02475 PF01544 CorA-like Mg2+ transporter protein HQK30_02495 PF02080 TrkA-C domain HQK30_02495 PF00999 Sodium/hydrogen exchanger family HQK30_02495 PF03471 Transporter associated domain HQK30_02500 PF05068 Mannitol repressor HQK30_02505 PF08125 Mannitol dehydrogenase C-terminal domain HQK30_02505 PF01232 Mannitol dehydrogenase Rossmann domain HQK30_02510 PF02378 Phosphotransferase system, EIIC HQK30_02510 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HQK30_02510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HQK30_02520 PF00440 Bacterial regulatory proteins, tetR family HQK30_02525 PF17876 Cold shock domain HQK30_02525 PF00773 RNB domain HQK30_02525 PF08206 Ribonuclease B OB domain HQK30_02530 PF03466 LysR substrate binding domain HQK30_02530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_02535 PF00765 Autoinducer synthase HQK30_02540 PF03472 Autoinducer binding domain HQK30_02540 PF00196 Bacterial regulatory proteins, luxR family HQK30_02545 PF01810 LysE type translocator HQK30_02550 PF02872 5'-nucleotidase, C-terminal domain HQK30_02550 PF00149 Calcineurin-like phosphoesterase HQK30_02555 PF05433 Glycine zipper 2TM domain HQK30_02560 PF00583 Acetyltransferase (GNAT) family HQK30_02565 PF11756 Nitrous oxide-stimulated promoter HQK30_02570 PF00557 Metallopeptidase family M24 HQK30_02570 PF01321 Creatinase/Prolidase N-terminal domain HQK30_02575 PF00392 Bacterial regulatory proteins, gntR family HQK30_02585 PF01430 Hsp33 protein HQK30_02590 PF01479 S4 domain HQK30_02595 PF11356 Type II secretion system protein C HQK30_02600 PF03958 Bacterial type II/III secretion system short domain HQK30_02600 PF00263 Bacterial type II and III secretion system protein HQK30_02605 PF00437 Type II/IV secretion system protein HQK30_02610 PF00482 Type II secretion system (T2SS), protein F HQK30_02615 PF07963 Prokaryotic N-terminal methylation motif HQK30_02615 PF08334 Type II secretion system (T2SS), protein G HQK30_02620 PF07963 Prokaryotic N-terminal methylation motif HQK30_02620 PF12019 Type II transport protein GspH HQK30_02625 PF07963 Prokaryotic N-terminal methylation motif HQK30_02625 PF02501 Type II secretion system (T2SS), protein I HQK30_02630 PF07963 Prokaryotic N-terminal methylation motif HQK30_02630 PF11612 Type II secretion system (T2SS), protein J HQK30_02635 PF03934 Type II secretion system (T2SS), protein K HQK30_02640 PF05134 Type II secretion system (T2SS), protein L HQK30_02640 PF12693 GspL periplasmic domain HQK30_02645 PF04612 Type II secretion system (T2SS), protein M HQK30_02650 PF01203 Type II secretion system (T2SS), protein N HQK30_02655 PF00196 Bacterial regulatory proteins, luxR family HQK30_02660 PF01479 S4 domain HQK30_02660 PF00579 tRNA synthetases class I (W and Y) HQK30_02665 PF03466 LysR substrate binding domain HQK30_02665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_02670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HQK30_02675 PF13419 Haloacid dehalogenase-like hydrolase HQK30_02680 PF00293 NUDIX domain HQK30_02685 PF00459 Inositol monophosphatase family HQK30_02690 PF03222 Tryptophan/tyrosine permease family HQK30_02695 PF01588 Putative tRNA binding domain HQK30_02700 PF12833 Helix-turn-helix domain HQK30_02700 PF06445 GyrI-like small molecule binding domain HQK30_02705 PF01340 Met Apo-repressor, MetJ HQK30_02710 PF01053 Cys/Met metabolism PLP-dependent enzyme HQK30_02715 PF03447 Homoserine dehydrogenase, NAD binding domain HQK30_02715 PF00696 Amino acid kinase family HQK30_02715 PF00742 Homoserine dehydrogenase HQK30_02725 PF00311 Phosphoenolpyruvate carboxylase HQK30_02730 PF01546 Peptidase family M20/M25/M40 HQK30_02730 PF07687 Peptidase dimerisation domain HQK30_02735 PF01118 Semialdehyde dehydrogenase, NAD binding domain HQK30_02735 PF02774 Semialdehyde dehydrogenase, dimerisation domain HQK30_02740 PF00696 Amino acid kinase family HQK30_02745 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HQK30_02745 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HQK30_02750 PF00764 Arginosuccinate synthase HQK30_02755 PF00206 Lyase HQK30_02755 PF14698 Argininosuccinate lyase C-terminal HQK30_02780 PF12464 Maltose acetyltransferase HQK30_02780 PF14602 Hexapeptide repeat of succinyl-transferase HQK30_02785 PF13194 Domain of unknown function (DUF4010) HQK30_02800 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_02805 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_02810 PF00005 ABC transporter HQK30_02810 PF12857 TOBE-like domain HQK30_02815 PF03466 LysR substrate binding domain HQK30_02815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_02820 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading HQK30_02820 PF18416 N-acetylglucosamine binding protein domain 2 HQK30_02825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_02825 PF08269 Cache domain HQK30_02855 PF14684 Tricorn protease C1 domain HQK30_02855 PF07676 WD40-like Beta Propeller Repeat HQK30_02855 PF14685 Tricorn protease PDZ domain HQK30_02855 PF03572 Peptidase family S41 HQK30_02875 PF11230 Protein of unknown function (DUF3029) HQK30_02880 PF04055 Radical SAM superfamily HQK30_02890 PF03466 LysR substrate binding domain HQK30_02890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_02895 PF00155 Aminotransferase class I and II HQK30_02900 PF02583 Metal-sensitive transcriptional repressor HQK30_02915 PF03714 Bacterial pullanase-associated domain HQK30_02915 PF11852 Domain of unknown function (DUF3372) HQK30_02915 PF17967 Pullulanase N2 domain HQK30_02915 PF18494 Pullulanase Ins domain HQK30_02915 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HQK30_02920 PF00403 Heavy-metal-associated domain HQK30_02925 PF08534 Redoxin HQK30_02935 PF00271 Helicase conserved C-terminal domain HQK30_02935 PF00270 DEAD/DEAH box helicase HQK30_02950 PF03372 Endonuclease/Exonuclease/phosphatase family HQK30_02965 PF06062 Uncharacterised protein family (UPF0231) HQK30_02970 PF05651 Putative sugar diacid recognition HQK30_02970 PF17853 GGDEF-like domain HQK30_02970 PF13556 PucR C-terminal helix-turn-helix domain HQK30_02975 PF02447 GntP family permease HQK30_02980 PF02595 Glycerate kinase family HQK30_02990 PF00255 Glutathione peroxidase HQK30_02995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_02995 PF03466 LysR substrate binding domain HQK30_03000 PF01773 Na+ dependent nucleoside transporter N-terminus HQK30_03000 PF07662 Na+ dependent nucleoside transporter C-terminus HQK30_03000 PF07670 Nucleoside recognition HQK30_03005 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HQK30_03005 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HQK30_03010 PF00472 RF-1 domain HQK30_03015 PF00543 Nitrogen regulatory protein P-II HQK30_03020 PF13416 Bacterial extracellular solute-binding protein HQK30_03030 PF00005 ABC transporter HQK30_03030 PF08402 TOBE domain HQK30_03035 PF04261 Dyp-type peroxidase family HQK30_03040 PF02863 Arginine repressor, C-terminal domain HQK30_03040 PF01316 Arginine repressor, DNA binding domain HQK30_03045 PF00005 ABC transporter HQK30_03050 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQK30_03055 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_03060 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_03065 PF00056 lactate/malate dehydrogenase, NAD binding domain HQK30_03065 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HQK30_03070 PF08238 Sel1 repeat HQK30_03075 PF00970 Oxidoreductase FAD-binding domain HQK30_03075 PF00042 Globin HQK30_03075 PF00175 Oxidoreductase NAD-binding domain HQK30_03080 PF02082 Transcriptional regulator HQK30_03085 PF00571 CBS domain HQK30_03085 PF01595 Cyclin M transmembrane N-terminal domain HQK30_03085 PF03471 Transporter associated domain HQK30_03090 PF01578 Cytochrome C assembly protein HQK30_03095 PF00448 SRP54-type protein, GTPase domain HQK30_03095 PF02881 SRP54-type protein, helical bundle domain HQK30_03095 PF02978 Signal peptide binding domain HQK30_03100 PF00886 Ribosomal protein S16 HQK30_03105 PF05239 PRC-barrel domain HQK30_03105 PF01782 RimM N-terminal domain HQK30_03110 PF01746 tRNA (Guanine-1)-methyltransferase HQK30_03115 PF01245 Ribosomal protein L19 HQK30_03125 PF02976 DNA mismatch repair enzyme MutH HQK30_03130 PF00293 NUDIX domain HQK30_03135 PF02896 PEP-utilising enzyme, TIM barrel domain HQK30_03135 PF05524 PEP-utilising enzyme, N-terminal HQK30_03135 PF01590 GAF domain HQK30_03135 PF00391 PEP-utilising enzyme, mobile domain HQK30_03140 PF01790 Prolipoprotein diacylglyceryl transferase HQK30_03145 PF00303 Thymidylate synthase HQK30_03150 PF06965 Na+/H+ antiporter 1 HQK30_03160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_03160 PF03466 LysR substrate binding domain HQK30_03165 PF01022 Bacterial regulatory protein, arsR family HQK30_03170 PF01649 Ribosomal protein S20 HQK30_03175 PF03023 Lipid II flippase MurJ HQK30_03180 PF01687 Riboflavin kinase HQK30_03180 PF06574 FAD synthetase HQK30_03185 PF06827 Zinc finger found in FPG and IleRS HQK30_03185 PF00133 tRNA synthetases class I (I, L, M and V) HQK30_03185 PF08264 Anticodon-binding domain of tRNA HQK30_03190 PF01252 Signal peptidase (SPase) II HQK30_03195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HQK30_03200 PF02401 LytB protein HQK30_03225 PF05567 Neisseria PilC beta-propeller domain HQK30_03230 PF07963 Prokaryotic N-terminal methylation motif HQK30_03230 PF00114 Pilin (bacterial filament) HQK30_03260 PF00795 Carbon-nitrogen hydrolase HQK30_03260 PF02540 NAD synthase HQK30_03265 PF00543 Nitrogen regulatory protein P-II HQK30_03275 PF02664 S-Ribosylhomocysteinase (LuxS) HQK30_03280 PF00990 Diguanylate cyclase, GGDEF domain HQK30_03285 PF08461 Ribonuclease R winged-helix domain HQK30_03285 PF17876 Cold shock domain HQK30_03285 PF00575 S1 RNA binding domain HQK30_03285 PF08206 Ribonuclease B OB domain HQK30_03285 PF00773 RNB domain HQK30_03310 PF08032 RNA 2'-O ribose methyltransferase substrate binding HQK30_03310 PF00588 SpoU rRNA Methylase family HQK30_03320 PF13673 Acetyltransferase (GNAT) domain HQK30_03325 PF00892 EamA-like transporter family HQK30_03345 PF07690 Major Facilitator Superfamily HQK30_03355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_03355 PF03466 LysR substrate binding domain HQK30_03365 PF01566 Natural resistance-associated macrophage protein HQK30_03370 PF01250 Ribosomal protein S6 HQK30_03375 PF01084 Ribosomal protein S18 HQK30_03380 PF01281 Ribosomal protein L9, N-terminal domain HQK30_03380 PF03948 Ribosomal protein L9, C-terminal domain HQK30_03385 PF00175 Oxidoreductase NAD-binding domain HQK30_03385 PF00970 Oxidoreductase FAD-binding domain HQK30_03410 PF08240 Alcohol dehydrogenase GroES-like domain HQK30_03410 PF00107 Zinc-binding dehydrogenase HQK30_03415 PF09335 SNARE associated Golgi protein HQK30_03420 PF00675 Insulinase (Peptidase family M16) HQK30_03420 PF05193 Peptidase M16 inactive domain HQK30_03425 PF04262 Glutamate-cysteine ligase HQK30_03430 PF00501 AMP-binding enzyme HQK30_03440 PF00583 Acetyltransferase (GNAT) family HQK30_03450 PF12592 Protein of unknown function (DUF3763) HQK30_03450 PF07728 AAA domain (dynein-related subfamily) HQK30_03450 PF17868 AAA lid domain HQK30_03455 PF05762 VWA domain containing CoxE-like protein HQK30_03465 PF01037 Lrp/AsnC ligand binding domain HQK30_03470 PF00563 EAL domain HQK30_03470 PF00990 Diguanylate cyclase, GGDEF domain HQK30_03470 PF03707 Bacterial signalling protein N terminal repeat HQK30_03470 PF13188 PAS domain HQK30_03475 PF00990 Diguanylate cyclase, GGDEF domain HQK30_03475 PF00072 Response regulator receiver domain HQK30_03480 PF00009 Elongation factor Tu GTP binding domain HQK30_03480 PF03144 Elongation factor Tu domain 2 HQK30_03480 PF16658 Class II release factor RF3, C-terminal domain HQK30_03490 PF00583 Acetyltransferase (GNAT) family HQK30_03495 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HQK30_03505 PF04480 Protein of unknown function (DUF559) HQK30_03510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_03510 PF03466 LysR substrate binding domain HQK30_03515 PF04371 Porphyromonas-type peptidyl-arginine deiminase HQK30_03520 PF01425 Amidase HQK30_03535 PF00753 Metallo-beta-lactamase superfamily HQK30_03545 PF02627 Carboxymuconolactone decarboxylase family HQK30_03550 PF02525 Flavodoxin-like fold HQK30_03560 PF00270 DEAD/DEAH box helicase HQK30_03560 PF00271 Helicase conserved C-terminal domain HQK30_03565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_03565 PF03466 LysR substrate binding domain HQK30_03580 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase HQK30_03595 PF00445 Ribonuclease T2 family HQK30_03605 PF03060 Nitronate monooxygenase HQK30_03635 PF09297 NADH pyrophosphatase zinc ribbon domain HQK30_03635 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain HQK30_03635 PF00293 NUDIX domain HQK30_03640 PF16527 Two-component sensor protein CpxA, periplasmic domain HQK30_03640 PF00672 HAMP domain HQK30_03640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_03640 PF00512 His Kinase A (phospho-acceptor) domain HQK30_03645 PF00072 Response regulator receiver domain HQK30_03645 PF00486 Transcriptional regulatory protein, C terminal HQK30_03650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HQK30_03655 PF02687 FtsX-like permease family HQK30_03655 PF00005 ABC transporter HQK30_03655 PF12704 MacB-like periplasmic core domain HQK30_03660 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQK30_03665 PF00005 ABC transporter HQK30_03670 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_03675 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_03680 PF00291 Pyridoxal-phosphate dependent enzyme HQK30_03685 PF00326 Prolyl oligopeptidase family HQK30_03685 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HQK30_03690 PF05170 AsmA family HQK30_03705 PF08335 GlnD PII-uridylyltransferase HQK30_03705 PF03710 Glutamate-ammonia ligase adenylyltransferase HQK30_03715 PF02743 Cache domain HQK30_03715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_03715 PF00672 HAMP domain HQK30_03720 PF00520 Ion transport protein HQK30_03720 PF00027 Cyclic nucleotide-binding domain HQK30_03725 PF08239 Bacterial SH3 domain HQK30_03730 PF01619 Proline dehydrogenase HQK30_03730 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HQK30_03730 PF14850 DNA-binding domain of Proline dehydrogenase HQK30_03730 PF00171 Aldehyde dehydrogenase family HQK30_03735 PF00293 NUDIX domain HQK30_03735 PF09297 NADH pyrophosphatase zinc ribbon domain HQK30_03740 PF01208 Uroporphyrinogen decarboxylase (URO-D) HQK30_03745 PF00480 ROK family HQK30_03750 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HQK30_03750 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HQK30_03755 PF00162 Phosphoglycerate kinase HQK30_03760 PF01116 Fructose-bisphosphate aldolase class-II HQK30_03765 PF01266 FAD dependent oxidoreductase HQK30_03785 PF11412 Disulphide bond corrector protein DsbC HQK30_03785 PF02683 Cytochrome C biogenesis protein transmembrane region HQK30_03790 PF03091 CutA1 divalent ion tolerance protein HQK30_03805 PF03466 LysR substrate binding domain HQK30_03805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_03810 PF01571 Aminomethyltransferase folate-binding domain HQK30_03815 PF03937 Flavinator of succinate dehydrogenase HQK30_03825 PF00890 FAD binding domain HQK30_03825 PF02910 Fumarate reductase flavoprotein C-term HQK30_03830 PF04542 Sigma-70 region 2 HQK30_03830 PF08281 Sigma-70, region 4 HQK30_03835 PF03872 Anti sigma-E protein RseA, N-terminal domain HQK30_03835 PF03873 Anti sigma-E protein RseA, C-terminal domain HQK30_03840 PF03888 MucB/RseB N-terminal domain HQK30_03840 PF17188 MucB/RseB C-terminal domain HQK30_03850 PF06421 GTP-binding protein LepA C-terminus HQK30_03850 PF00679 Elongation factor G C-terminus HQK30_03850 PF03144 Elongation factor Tu domain 2 HQK30_03850 PF00009 Elongation factor Tu GTP binding domain HQK30_03855 PF10502 Signal peptidase, peptidase S26 HQK30_03860 PF00035 Double-stranded RNA binding motif HQK30_03860 PF14622 Ribonuclease-III-like HQK30_03865 PF01926 50S ribosome-binding GTPase HQK30_03865 PF07650 KH domain HQK30_03870 PF02565 Recombination protein O C terminal HQK30_03870 PF11967 Recombination protein O N terminal HQK30_03875 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HQK30_03880 PF01116 Fructose-bisphosphate aldolase class-II HQK30_03885 PF01979 Amidohydrolase family HQK30_03890 PF03610 PTS system fructose IIA component HQK30_03895 PF03613 PTS system mannose/fructose/sorbose family IID component HQK30_03900 PF03609 PTS system sorbose-specific iic component HQK30_03905 PF03830 PTS system sorbose subfamily IIB component HQK30_03910 PF01380 SIS domain HQK30_03915 PF08013 Tagatose 6 phosphate kinase HQK30_03920 PF00455 DeoR C terminal sensor domain HQK30_03920 PF08220 DeoR-like helix-turn-helix domain HQK30_03925 PF01510 N-acetylmuramoyl-L-alanine amidase HQK30_03930 PF07308 Protein of unknown function (DUF1456) HQK30_03935 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HQK30_03935 PF00512 His Kinase A (phospho-acceptor) domain HQK30_03935 PF01627 Hpt domain HQK30_03935 PF00072 Response regulator receiver domain HQK30_03935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_03935 PF00672 HAMP domain HQK30_03940 PF05958 tRNA (Uracil-5-)-methyltransferase HQK30_03940 PF01938 TRAM domain HQK30_03945 PF04607 Region found in RelA / SpoT proteins HQK30_03945 PF02824 TGS domain HQK30_03945 PF13291 ACT domain HQK30_03950 PF03819 MazG nucleotide pyrophosphohydrolase domain HQK30_03955 PF00117 Glutamine amidotransferase class-I HQK30_03955 PF06418 CTP synthase N-terminus HQK30_03960 PF00113 Enolase, C-terminal TIM barrel domain HQK30_03960 PF03952 Enolase, N-terminal domain HQK30_03965 PF04977 Septum formation initiator HQK30_03970 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HQK30_03975 PF02542 YgbB family HQK30_03980 PF01142 tRNA pseudouridine synthase D (TruD) HQK30_03985 PF01975 Survival protein SurE HQK30_03995 PF09335 SNARE associated Golgi protein HQK30_04000 PF01476 LysM domain HQK30_04000 PF01551 Peptidase family M23 HQK30_04005 PF00140 Sigma-70 factor, region 1.2 HQK30_04005 PF04542 Sigma-70 region 2 HQK30_04005 PF04539 Sigma-70 region 3 HQK30_04005 PF04545 Sigma-70, region 4 HQK30_04010 PF00814 Glycoprotease family HQK30_04015 PF01165 Ribosomal protein S21 HQK30_04020 PF09424 Yqey-like protein HQK30_04025 PF01807 CHC2 zinc finger HQK30_04025 PF10410 DnaB-helicase binding domain of primase HQK30_04025 PF08275 DNA primase catalytic core, N-terminal domain HQK30_04025 PF08278 DNA primase DnaG DnaB-binding HQK30_04030 PF04546 Sigma-70, non-essential region HQK30_04030 PF00140 Sigma-70 factor, region 1.2 HQK30_04030 PF03979 Sigma-70 factor, region 1.1 HQK30_04030 PF04545 Sigma-70, region 4 HQK30_04030 PF04539 Sigma-70 region 3 HQK30_04030 PF04542 Sigma-70 region 2 HQK30_04110 PF02844 Phosphoribosylglycinamide synthetase, N domain HQK30_04110 PF02843 Phosphoribosylglycinamide synthetase, C domain HQK30_04110 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HQK30_04115 PF01808 AICARFT/IMPCHase bienzyme HQK30_04115 PF02142 MGS-like domain HQK30_04120 PF13411 MerR HTH family regulatory protein HQK30_04130 PF03889 Alternative ribosome-rescue factor A HQK30_04135 PF04055 Radical SAM superfamily HQK30_04135 PF06969 HemN C-terminal domain HQK30_04140 PF01725 Ham1 family HQK30_04145 PF07690 Major Facilitator Superfamily HQK30_04150 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HQK30_04150 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HQK30_04160 PF13302 Acetyltransferase (GNAT) domain HQK30_04165 PF13302 Acetyltransferase (GNAT) domain HQK30_04170 PF07504 Fungalysin/Thermolysin Propeptide Motif HQK30_04170 PF03413 Peptidase propeptide and YPEB domain HQK30_04170 PF01447 Thermolysin metallopeptidase, catalytic domain HQK30_04170 PF04151 Bacterial pre-peptidase C-terminal domain HQK30_04170 PF02868 Thermolysin metallopeptidase, alpha-helical domain HQK30_04175 PF03466 LysR substrate binding domain HQK30_04175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_04180 PF07690 Major Facilitator Superfamily HQK30_04185 PF00267 Gram-negative porin HQK30_04190 PF03605 Anaerobic c4-dicarboxylate membrane transporter HQK30_04195 PF10415 Fumarase C C-terminus HQK30_04195 PF00206 Lyase HQK30_04200 PF04186 FxsA cytoplasmic membrane protein HQK30_04205 PF01554 MatE HQK30_04210 PF00166 Chaperonin 10 Kd subunit HQK30_04215 PF00118 TCP-1/cpn60 chaperonin family HQK30_04225 PF03707 Bacterial signalling protein N terminal repeat HQK30_04225 PF00990 Diguanylate cyclase, GGDEF domain HQK30_04225 PF00563 EAL domain HQK30_04225 PF13188 PAS domain HQK30_04235 PF00849 RNA pseudouridylate synthase HQK30_04240 PF18339 RapA N-terminal Tudor like domain 1 HQK30_04240 PF00271 Helicase conserved C-terminal domain HQK30_04240 PF18337 RapA N-terminal Tudor like domain HQK30_04240 PF12137 RNA polymerase recycling family C-terminal HQK30_04240 PF00176 SNF2 family N-terminal domain HQK30_04275 PF00317 Ribonucleotide reductase, all-alpha domain HQK30_04275 PF02867 Ribonucleotide reductase, barrel domain HQK30_04275 PF08343 Ribonucleotide reductase N-terminal HQK30_04285 PF02562 PhoH-like protein HQK30_04285 PF13638 PIN domain HQK30_04295 PF00005 ABC transporter HQK30_04300 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_04340 PF00694 Aconitase C-terminal domain HQK30_04345 PF00330 Aconitase family (aconitate hydratase) HQK30_04350 PF00180 Isocitrate/isopropylmalate dehydrogenase HQK30_04355 PF08502 LeuA allosteric (dimerisation) domain HQK30_04355 PF00682 HMGL-like HQK30_04365 PF01569 PAP2 superfamily HQK30_04380 PF00205 Thiamine pyrophosphate enzyme, central domain HQK30_04380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQK30_04380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HQK30_04385 PF10369 Small subunit of acetolactate synthase HQK30_04390 PF07085 DRTGG domain HQK30_04390 PF01515 Phosphate acetyl/butaryl transferase HQK30_04395 PF00871 Acetokinase family HQK30_04400 PF04217 Protein of unknown function, DUF412 HQK30_04405 PF03887 YfbU domain HQK30_04410 PF00578 AhpC/TSA family HQK30_04415 PF01842 ACT domain HQK30_04420 PF00701 Dihydrodipicolinate synthetase family HQK30_04425 PF06804 NlpB/DapX lipoprotein HQK30_04430 PF01259 SAICAR synthetase HQK30_04440 PF03466 LysR substrate binding domain HQK30_04440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_04445 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HQK30_04465 PF00989 PAS fold HQK30_04465 PF00072 Response regulator receiver domain HQK30_04465 PF01627 Hpt domain HQK30_04465 PF18415 Histidine kinase receptor ArcB trans-membrane domain HQK30_04465 PF00512 His Kinase A (phospho-acceptor) domain HQK30_04465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_04470 PF01966 HD domain HQK30_04480 PF00072 Response regulator receiver domain HQK30_04480 PF09456 RcsC Alpha-Beta-Loop (ABL) HQK30_04480 PF00512 His Kinase A (phospho-acceptor) domain HQK30_04480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_04485 PF03707 Bacterial signalling protein N terminal repeat HQK30_04485 PF00563 EAL domain HQK30_04485 PF00990 Diguanylate cyclase, GGDEF domain HQK30_04490 PF00672 HAMP domain HQK30_04490 PF12729 Four helix bundle sensory module for signal transduction HQK30_04490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_04495 PF02357 Transcription termination factor nusG HQK30_04500 PF03180 NLPA lipoprotein HQK30_04505 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_04510 PF09383 NIL domain HQK30_04510 PF00005 ABC transporter HQK30_04520 PF00480 ROK family HQK30_04525 PF08331 Domain of unknown function (DUF1730) HQK30_04530 PF03853 YjeF-related protein N-terminus HQK30_04530 PF01256 Carbohydrate kinase HQK30_04535 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HQK30_04540 PF01520 N-acetylmuramoyl-L-alanine amidase HQK30_04545 PF08676 MutL C terminal dimerisation domain HQK30_04545 PF01119 DNA mismatch repair protein, C-terminal domain HQK30_04555 PF17209 Hfq protein HQK30_04560 PF01926 50S ribosome-binding GTPase HQK30_04560 PF13167 GTP-binding GTPase N-terminal HQK30_04560 PF16360 GTP-binding GTPase Middle Region HQK30_04565 PF01145 SPFH domain / Band 7 family HQK30_04565 PF12221 Bacterial membrane protein N terminal HQK30_04570 PF01145 SPFH domain / Band 7 family HQK30_04575 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) HQK30_04580 PF00348 Polyprenyl synthetase HQK30_04585 PF00829 Ribosomal prokaryotic L21 protein HQK30_04590 PF01016 Ribosomal L27 protein HQK30_04595 PF01018 GTP1/OBG HQK30_04595 PF01926 50S ribosome-binding GTPase HQK30_04605 PF00501 AMP-binding enzyme HQK30_04605 PF13193 AMP-binding enzyme C-terminal domain HQK30_04625 PF00296 Luciferase-like monooxygenase HQK30_04635 PF00149 Calcineurin-like phosphoesterase HQK30_04640 PF04379 ApaG domain HQK30_04645 PF00398 Ribosomal RNA adenine dimethylase HQK30_04650 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HQK30_04655 PF09312 SurA N-terminal domain HQK30_04655 PF00639 PPIC-type PPIASE domain HQK30_04660 PF04453 LPS transport system D HQK30_04660 PF03968 OstA-like protein HQK30_04665 PF01636 Phosphotransferase enzyme family HQK30_04670 PF00483 Nucleotidyl transferase HQK30_04675 PF00226 DnaJ domain HQK30_04675 PF05099 Tellurite resistance protein TerB HQK30_04680 PF00860 Permease family HQK30_04690 PF12848 ABC transporter HQK30_04690 PF00005 ABC transporter HQK30_04705 PF01048 Phosphorylase superfamily HQK30_04710 PF01464 Transglycosylase SLT domain HQK30_04720 PF01370 NAD dependent epimerase/dehydratase family HQK30_04735 PF00005 ABC transporter HQK30_04740 PF01032 FecCD transport family HQK30_04750 PF06228 Haem utilisation ChuX/HutX HQK30_04755 PF01243 Pyridoxamine 5'-phosphate oxidase HQK30_04775 PF00593 TonB dependent receptor HQK30_04775 PF07715 TonB-dependent Receptor Plug Domain HQK30_04780 PF12832 MFS_1 like family HQK30_04790 PF13443 Cro/C1-type HTH DNA-binding domain HQK30_04800 PF00989 PAS fold HQK30_04800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_04800 PF00512 His Kinase A (phospho-acceptor) domain HQK30_04805 PF00704 Glycosyl hydrolases family 18 HQK30_04805 PF08329 Chitinase A, N-terminal domain HQK30_04810 PF12561 ToxR activated gene A lipoprotein domain HQK30_04810 PF17945 Beta/Gamma crystallin HQK30_04815 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading HQK30_04815 PF18416 N-acetylglucosamine binding protein domain 2 HQK30_04820 PF08241 Methyltransferase domain HQK30_04825 PF00027 Cyclic nucleotide-binding domain HQK30_04825 PF13545 Crp-like helix-turn-helix domain HQK30_04830 PF02566 OsmC-like protein HQK30_04845 PF00485 Phosphoribulokinase / Uridine kinase family HQK30_04850 PF00893 Small Multidrug Resistance protein HQK30_04855 PF00892 EamA-like transporter family HQK30_04860 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HQK30_04865 PF01522 Polysaccharide deacetylase HQK30_04870 PF00551 Formyl transferase HQK30_04870 PF01370 NAD dependent epimerase/dehydratase family HQK30_04870 PF02911 Formyl transferase, C-terminal domain HQK30_04875 PF00535 Glycosyl transferase family 2 HQK30_04880 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HQK30_04885 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HQK30_04885 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HQK30_04885 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HQK30_04890 PF06794 Uncharacterised protein family (UPF0270) HQK30_04895 PF00561 alpha/beta hydrolase fold HQK30_04900 PF01584 CheW-like domain HQK30_04900 PF00072 Response regulator receiver domain HQK30_04910 PF09526 Probable metal-binding protein (DUF2387) HQK30_04915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HQK30_04920 PF04102 SlyX HQK30_04930 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HQK30_04930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HQK30_04935 PF02954 Bacterial regulatory protein, Fis family HQK30_04935 PF00072 Response regulator receiver domain HQK30_04935 PF00158 Sigma-54 interaction domain HQK30_04955 PF00149 Calcineurin-like phosphoesterase HQK30_04955 PF02872 5'-nucleotidase, C-terminal domain HQK30_04960 PF12792 CSS motif domain associated with EAL HQK30_04960 PF00563 EAL domain HQK30_04970 PF03796 DnaB-like helicase C terminal domain HQK30_04970 PF00772 DnaB-like helicase N terminal domain HQK30_04975 PF00842 Alanine racemase, C-terminal domain HQK30_04975 PF01168 Alanine racemase, N-terminal domain HQK30_04980 PF12838 4Fe-4S dicluster domain HQK30_04990 PF00989 PAS fold HQK30_04990 PF00563 EAL domain HQK30_04990 PF01590 GAF domain HQK30_04990 PF00990 Diguanylate cyclase, GGDEF domain HQK30_05015 PF00266 Aminotransferase class-V HQK30_05020 PF00072 Response regulator receiver domain HQK30_05020 PF01339 CheB methylesterase HQK30_05025 PF03975 CheD chemotactic sensory transduction HQK30_05030 PF03705 CheR methyltransferase, all-alpha domain HQK30_05030 PF01739 CheR methyltransferase, SAM binding domain HQK30_05035 PF00672 HAMP domain HQK30_05035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_05040 PF01584 CheW-like domain HQK30_05045 PF00672 HAMP domain HQK30_05045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_05045 PF12729 Four helix bundle sensory module for signal transduction HQK30_05050 PF01584 CheW-like domain HQK30_05050 PF02895 Signal transducing histidine kinase, homodimeric domain HQK30_05050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_05050 PF01627 Hpt domain HQK30_05050 PF09078 CheY binding HQK30_05060 PF00072 Response regulator receiver domain HQK30_05065 PF00672 HAMP domain HQK30_05065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_05075 PF03466 LysR substrate binding domain HQK30_05075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_05080 PF01810 LysE type translocator HQK30_05085 PF01136 Peptidase family U32 HQK30_05085 PF12392 Collagenase HQK30_05100 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HQK30_05100 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HQK30_05105 PF02805 Metal binding domain of Ada HQK30_05105 PF06029 AlkA N-terminal domain HQK30_05105 PF12833 Helix-turn-helix domain HQK30_05105 PF00730 HhH-GPD superfamily base excision DNA repair protein HQK30_05115 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HQK30_05140 PF00106 short chain dehydrogenase HQK30_05145 PF03573 outer membrane porin, OprD family HQK30_05150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_05150 PF00672 HAMP domain HQK30_05150 PF02743 Cache domain HQK30_05160 PF02447 GntP family permease HQK30_05165 PF01370 NAD dependent epimerase/dehydratase family HQK30_05170 PF01261 Xylose isomerase-like TIM barrel HQK30_05175 PF00596 Class II Aldolase and Adducin N-terminal domain HQK30_05180 PF17042 Nucleotide-binding C-terminal domain HQK30_05180 PF07005 Sugar-binding N-terminal domain HQK30_05185 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HQK30_05185 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HQK30_05190 PF00455 DeoR C terminal sensor domain HQK30_05190 PF08220 DeoR-like helix-turn-helix domain HQK30_05215 PF01817 Chorismate mutase type II HQK30_05215 PF00800 Prephenate dehydratase HQK30_05245 PF08349 Protein of unknown function (DUF1722) HQK30_05250 PF13411 MerR HTH family regulatory protein HQK30_05255 PF03441 FAD binding domain of DNA photolyase HQK30_05255 PF00875 DNA photolyase HQK30_05265 PF00106 short chain dehydrogenase HQK30_05305 PF00210 Ferritin-like domain HQK30_05310 PF03063 Prismane/CO dehydrogenase family HQK30_05315 PF00970 Oxidoreductase FAD-binding domain HQK30_05315 PF00175 Oxidoreductase NAD-binding domain HQK30_05315 PF00042 Globin HQK30_05320 PF16363 GDP-mannose 4,6 dehydratase HQK30_05325 PF13462 Thioredoxin HQK30_05325 PF06965 Na+/H+ antiporter 1 HQK30_05340 PF03472 Autoinducer binding domain HQK30_05340 PF00196 Bacterial regulatory proteins, luxR family HQK30_05345 PF05638 Type VI secretion system effector, Hcp HQK30_05355 PF04717 Type VI secretion system, phage-baseplate injector HQK30_05405 PF03466 LysR substrate binding domain HQK30_05405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_05410 PF03306 Alpha-acetolactate decarboxylase HQK30_05415 PF00205 Thiamine pyrophosphate enzyme, central domain HQK30_05415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HQK30_05415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQK30_05420 PF01965 DJ-1/PfpI family HQK30_05425 PF08546 Ketopantoate reductase PanE/ApbA C terminal HQK30_05425 PF02558 Ketopantoate reductase PanE/ApbA HQK30_05430 PF04461 Protein of unknown function (DUF520) HQK30_05435 PF03502 Nucleoside-specific channel-forming protein, Tsx HQK30_05440 PF07690 Major Facilitator Superfamily HQK30_05450 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HQK30_05460 PF05175 Methyltransferase small domain HQK30_05465 PF01722 BolA-like protein HQK30_05470 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) HQK30_05470 PF11973 NQRA C-terminal domain HQK30_05475 PF03116 NQR2, RnfD, RnfE family HQK30_05480 PF04205 FMN-binding domain HQK30_05485 PF02508 Rnf-Nqr subunit, membrane protein HQK30_05490 PF02508 Rnf-Nqr subunit, membrane protein HQK30_05495 PF00111 2Fe-2S iron-sulfur cluster binding domain HQK30_05495 PF00970 Oxidoreductase FAD-binding domain HQK30_05495 PF00175 Oxidoreductase NAD-binding domain HQK30_05500 PF02424 ApbE family HQK30_05515 PF11798 IMS family HHH motif HQK30_05515 PF11799 impB/mucB/samB family C-terminal domain HQK30_05515 PF00817 impB/mucB/samB family HQK30_05520 PF00672 HAMP domain HQK30_05520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_05525 PF03466 LysR substrate binding domain HQK30_05525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_05535 PF04241 Protein of unknown function (DUF423) HQK30_05540 PF01728 FtsJ-like methyltransferase HQK30_05540 PF18125 RlmM ferredoxin-like domain HQK30_05550 PF18324 Hypothetical protein TT1725 HQK30_05550 PF00180 Isocitrate/isopropylmalate dehydrogenase HQK30_05555 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HQK30_05555 PF01367 5'-3' exonuclease, C-terminal SAM fold HQK30_05560 PF03641 Possible lysine decarboxylase HQK30_05560 PF11892 Domain of unknown function (DUF3412) HQK30_05560 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HQK30_05565 PF00990 Diguanylate cyclase, GGDEF domain HQK30_05575 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HQK30_05575 PF14489 QueF-like protein HQK30_05580 PF07348 Syd protein (SUKH-2) HQK30_05585 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) HQK30_05610 PF04287 tRNA pseudouridine synthase C HQK30_05615 PF00849 RNA pseudouridylate synthase HQK30_05620 PF00258 Flavodoxin HQK30_05625 PF02264 LamB porin HQK30_05630 PF07148 Maltose operon periplasmic protein precursor (MalM) HQK30_05635 PF00367 phosphotransferase system, EIIB HQK30_05635 PF02378 Phosphotransferase system, EIIC HQK30_05640 PF11944 Protein of unknown function (DUF3461) HQK30_05645 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HQK30_05645 PF14602 Hexapeptide repeat of succinyl-transferase HQK30_05645 PF00132 Bacterial transferase hexapeptide (six repeats) HQK30_05650 PF01842 ACT domain HQK30_05650 PF08335 GlnD PII-uridylyltransferase HQK30_05650 PF01966 HD domain HQK30_05650 PF01909 Nucleotidyltransferase domain HQK30_05655 PF00557 Metallopeptidase family M24 HQK30_05660 PF00318 Ribosomal protein S2 HQK30_05665 PF00889 Elongation factor TS HQK30_05670 PF00696 Amino acid kinase family HQK30_05675 PF01765 Ribosome recycling factor HQK30_05680 PF01255 Putative undecaprenyl diphosphate synthase HQK30_05690 PF13288 DXP reductoisomerase C-terminal domain HQK30_05690 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HQK30_05690 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HQK30_05695 PF17820 PDZ domain HQK30_05695 PF02163 Peptidase family M50 HQK30_05700 PF01103 Surface antigen HQK30_05700 PF07244 Surface antigen variable number repeat HQK30_05705 PF03938 Outer membrane protein (OmpH-like) HQK30_05710 PF00132 Bacterial transferase hexapeptide (six repeats) HQK30_05710 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HQK30_05715 PF07977 FabA-like domain HQK30_05720 PF00132 Bacterial transferase hexapeptide (six repeats) HQK30_05720 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HQK30_05725 PF02684 Lipid-A-disaccharide synthetase HQK30_05730 PF01351 Ribonuclease HII HQK30_05735 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HQK30_05735 PF14579 Helix-hairpin-helix motif HQK30_05735 PF02811 PHP domain HQK30_05735 PF01336 OB-fold nucleic acid binding domain HQK30_05735 PF07733 Bacterial DNA polymerase III alpha NTPase domain HQK30_05740 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HQK30_05745 PF00486 Transcriptional regulatory protein, C terminal HQK30_05745 PF18500 CadC C-terminal domain 1 HQK30_05750 PF13520 Amino acid permease HQK30_05755 PF01276 Orn/Lys/Arg decarboxylase, major domain HQK30_05755 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HQK30_05755 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HQK30_05760 PF08543 Phosphomethylpyrimidine kinase HQK30_05770 PF03466 LysR substrate binding domain HQK30_05770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_05780 PF13520 Amino acid permease HQK30_05785 PF13302 Acetyltransferase (GNAT) domain HQK30_05790 PF16326 ABC transporter C-terminal domain HQK30_05790 PF00005 ABC transporter HQK30_05790 PF12848 ABC transporter HQK30_05800 PF05649 Peptidase family M13 HQK30_05800 PF01431 Peptidase family M13 HQK30_05805 PF09179 TilS substrate binding domain HQK30_05805 PF01171 PP-loop family HQK30_05805 PF11734 TilS substrate C-terminal domain HQK30_05810 PF00990 Diguanylate cyclase, GGDEF domain HQK30_05815 PF00999 Sodium/hydrogen exchanger family HQK30_05815 PF02080 TrkA-C domain HQK30_05815 PF02254 TrkA-N domain HQK30_05835 PF00196 Bacterial regulatory proteins, luxR family HQK30_05835 PF00072 Response regulator receiver domain HQK30_05845 PF00128 Alpha amylase, catalytic domain HQK30_05860 PF00535 Glycosyl transferase family 2 HQK30_05875 PF03734 L,D-transpeptidase catalytic domain HQK30_05875 PF01471 Putative peptidoglycan binding domain HQK30_05880 PF05951 Bacterial protein of unknown function (DUF882) HQK30_05890 PF03458 UPF0126 domain HQK30_05900 PF06470 SMC proteins Flexible Hinge Domain HQK30_05900 PF02463 RecF/RecN/SMC N terminal domain HQK30_05905 PF04354 ZipA, C-terminal FtsZ-binding domain HQK30_05910 PF12826 Helix-hairpin-helix motif HQK30_05910 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HQK30_05910 PF01653 NAD-dependent DNA ligase adenylation domain HQK30_05910 PF03120 NAD-dependent DNA ligase OB-fold domain HQK30_05910 PF00533 BRCA1 C Terminus (BRCT) domain HQK30_05920 PF13597 Anaerobic ribonucleoside-triphosphate reductase HQK30_05920 PF03477 ATP cone domain HQK30_05930 PF01679 Proteolipid membrane potential modulator HQK30_05955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HQK30_05955 PF00529 HlyD membrane-fusion protein of T1SS HQK30_05960 PF01047 MarR family HQK30_05970 PF03390 2-hydroxycarboxylate transporter family HQK30_05975 PF00390 Malic enzyme, N-terminal domain HQK30_05975 PF03949 Malic enzyme, NAD binding domain HQK30_05980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_05980 PF00989 PAS fold HQK30_05980 PF17203 Single cache domain 3 HQK30_05980 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HQK30_05985 PF12431 Transcriptional regulator HQK30_05985 PF00072 Response regulator receiver domain HQK30_05990 PF00892 EamA-like transporter family HQK30_06000 PF00171 Aldehyde dehydrogenase family HQK30_06005 PF01590 GAF domain HQK30_06005 PF02954 Bacterial regulatory protein, Fis family HQK30_06005 PF00158 Sigma-54 interaction domain HQK30_06010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HQK30_06010 PF02770 Acyl-CoA dehydrogenase, middle domain HQK30_06010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HQK30_06015 PF02515 CoA-transferase family III HQK30_06020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQK30_06025 PF00486 Transcriptional regulatory protein, C terminal HQK30_06025 PF00072 Response regulator receiver domain HQK30_06030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_06030 PF00512 His Kinase A (phospho-acceptor) domain HQK30_06030 PF00989 PAS fold HQK30_06030 PF11808 Phosphate regulon sensor protein PhoR HQK30_06035 PF12849 PBP superfamily domain HQK30_06040 PF01435 Peptidase family M48 HQK30_06050 PF00480 ROK family HQK30_06055 PF03932 CutC family HQK30_06070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HQK30_06070 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HQK30_06075 PF00005 ABC transporter HQK30_06090 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQK30_06095 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_06100 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_06105 PF00005 ABC transporter HQK30_06115 PF00293 NUDIX domain HQK30_06125 PF08534 Redoxin HQK30_06130 PF01699 Sodium/calcium exchanger protein HQK30_06135 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HQK30_06135 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HQK30_06140 PF01235 Sodium:alanine symporter family HQK30_06150 PF00860 Permease family HQK30_06155 PF00990 Diguanylate cyclase, GGDEF domain HQK30_06155 PF00072 Response regulator receiver domain HQK30_06160 PF10692 Protein of unknown function (DUF2498) HQK30_06165 PF01554 MatE HQK30_06170 PF06719 AraC-type transcriptional regulator N-terminus HQK30_06170 PF12833 Helix-turn-helix domain HQK30_06175 PF03949 Malic enzyme, NAD binding domain HQK30_06175 PF00390 Malic enzyme, N-terminal domain HQK30_06180 PF01389 OmpA-like transmembrane domain HQK30_06180 PF00691 OmpA family HQK30_06185 PF00691 OmpA family HQK30_06185 PF01389 OmpA-like transmembrane domain HQK30_06190 PF01389 OmpA-like transmembrane domain HQK30_06190 PF00691 OmpA family HQK30_06205 PF00209 Sodium:neurotransmitter symporter family HQK30_06210 PF01734 Patatin-like phospholipase HQK30_06215 PF00990 Diguanylate cyclase, GGDEF domain HQK30_06215 PF17158 Membrane-associated sensor, integral membrane domain HQK30_06220 PF00529 HlyD membrane-fusion protein of T1SS HQK30_06220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HQK30_06225 PF00873 AcrB/AcrD/AcrF family HQK30_06235 PF08497 Radical SAM N-terminal HQK30_06235 PF11842 Domain of unknown function (DUF3362) HQK30_06235 PF04055 Radical SAM superfamily HQK30_06245 PF01810 LysE type translocator HQK30_06255 PF00171 Aldehyde dehydrogenase family HQK30_06300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HQK30_06305 PF02075 Crossover junction endodeoxyribonuclease RuvC HQK30_06310 PF00230 Major intrinsic protein HQK30_06315 PF01551 Peptidase family M23 HQK30_06315 PF10145 Phage-related minor tail protein HQK30_06315 PF01464 Transglycosylase SLT domain HQK30_06320 PF00128 Alpha amylase, catalytic domain HQK30_06325 PF01551 Peptidase family M23 HQK30_06340 PF13396 Phospholipase_D-nuclease N-terminal HQK30_06340 PF13091 PLD-like domain HQK30_06350 PF01842 ACT domain HQK30_06350 PF00551 Formyl transferase HQK30_06355 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HQK30_06365 PF00085 Thioredoxin HQK30_06370 PF01648 4'-phosphopantetheinyl transferase superfamily HQK30_06375 PF00877 NlpC/P60 family HQK30_06380 PF05971 RNA methyltransferase HQK30_06385 PF01575 MaoC like domain HQK30_06395 PF01476 LysM domain HQK30_06395 PF17969 L,D-transpeptidase C-terminal domain HQK30_06395 PF03734 L,D-transpeptidase catalytic domain HQK30_06405 PF00893 Small Multidrug Resistance protein HQK30_06410 PF00893 Small Multidrug Resistance protein HQK30_06420 PF06130 Phosphate propanoyltransferase HQK30_06425 PF00936 BMC domain HQK30_06430 PF04055 Radical SAM superfamily HQK30_06430 PF13187 4Fe-4S dicluster domain HQK30_06435 PF02901 Pyruvate formate lyase-like HQK30_06435 PF01228 Glycine radical HQK30_06440 PF00171 Aldehyde dehydrogenase family HQK30_06440 PF00465 Iron-containing alcohol dehydrogenase HQK30_06450 PF00171 Aldehyde dehydrogenase family HQK30_06450 PF00465 Iron-containing alcohol dehydrogenase HQK30_06455 PF00936 BMC domain HQK30_06460 PF00936 BMC domain HQK30_06465 PF00936 BMC domain HQK30_06485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_06485 PF03466 LysR substrate binding domain HQK30_06490 PF02634 FdhD/NarQ family HQK30_06495 PF00384 Molybdopterin oxidoreductase HQK30_06510 PF00440 Bacterial regulatory proteins, tetR family HQK30_06515 PF02770 Acyl-CoA dehydrogenase, middle domain HQK30_06515 PF09317 Domain of unknown function (DUF1974) HQK30_06515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HQK30_06515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HQK30_06520 PF00873 AcrB/AcrD/AcrF family HQK30_06530 PF02887 Pyruvate kinase, alpha/beta domain HQK30_06530 PF00224 Pyruvate kinase, barrel domain HQK30_06535 PF01380 SIS domain HQK30_06535 PF01418 Helix-turn-helix domain, rpiR family HQK30_06540 PF02685 Glucokinase HQK30_06550 PF00486 Transcriptional regulatory protein, C terminal HQK30_06550 PF00072 Response regulator receiver domain HQK30_06555 PF03412 Peptidase C39 family HQK30_06555 PF00005 ABC transporter HQK30_06555 PF00664 ABC transporter transmembrane region HQK30_06565 PF03412 Peptidase C39 family HQK30_06565 PF00005 ABC transporter HQK30_06565 PF00664 ABC transporter transmembrane region HQK30_06575 PF02794 RTX toxin acyltransferase family HQK30_06580 PF12146 Serine aminopeptidase, S33 HQK30_06580 PF11647 Membrane Localization Domain HQK30_06580 PF16671 Actin cross-linking domain HQK30_06580 PF07634 RtxA repeat HQK30_06580 PF11713 Peptidase C80 family HQK30_06585 PF04055 Radical SAM superfamily HQK30_06585 PF18693 TRAM domain HQK30_06585 PF00919 Uncharacterized protein family UPF0004 HQK30_06590 PF00072 Response regulator receiver domain HQK30_06600 PF02001 Protein of unknown function DUF134 HQK30_06605 PF01022 Bacterial regulatory protein, arsR family HQK30_06610 PF06953 Arsenical resistance operon trans-acting repressor ArsD HQK30_06615 PF02374 Anion-transporting ATPase HQK30_06620 PF01758 Sodium Bile acid symporter family HQK30_06625 PF03960 ArsC family HQK30_06640 PF02049 Flagellar hook-basal body complex protein FliE HQK30_06645 PF01514 Secretory protein of YscJ/FliF family HQK30_06645 PF08345 Flagellar M-ring protein C-terminal HQK30_06650 PF14842 FliG N-terminal domain HQK30_06650 PF14841 FliG middle domain HQK30_06650 PF01706 FliG C-terminal domain HQK30_06660 PF18269 T3SS EscN ATPase C-terminal domain HQK30_06660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HQK30_06680 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HQK30_06680 PF02154 Flagellar motor switch protein FliM HQK30_06685 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HQK30_06690 PF04347 Flagellar biosynthesis protein, FliO HQK30_06695 PF00813 FliP family HQK30_06700 PF01313 Bacterial export proteins, family 3 HQK30_06705 PF01311 Bacterial export proteins, family 1 HQK30_06710 PF01312 FlhB HrpN YscU SpaS Family HQK30_06715 PF00771 FHIPEP family HQK30_06720 PF00448 SRP54-type protein, GTPase domain HQK30_06725 PF10609 NUBPL iron-transfer P-loop NTPase HQK30_06730 PF04542 Sigma-70 region 2 HQK30_06730 PF04539 Sigma-70 region 3 HQK30_06730 PF04545 Sigma-70, region 4 HQK30_06735 PF00072 Response regulator receiver domain HQK30_06740 PF04344 Chemotaxis phosphatase, CheZ HQK30_06745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_06745 PF00072 Response regulator receiver domain HQK30_06745 PF01627 Hpt domain HQK30_06745 PF02895 Signal transducing histidine kinase, homodimeric domain HQK30_06745 PF01584 CheW-like domain HQK30_06750 PF01339 CheB methylesterase HQK30_06750 PF00072 Response regulator receiver domain HQK30_06755 PF01618 MotA/TolQ/ExbB proton channel family HQK30_06760 PF00691 OmpA family HQK30_06760 PF13677 Membrane MotB of proton-channel complex MotA/MotB HQK30_06765 PF13614 AAA domain HQK30_06775 PF01584 CheW-like domain HQK30_06785 PF00005 ABC transporter HQK30_06790 PF03379 CcmB protein HQK30_06795 PF01578 Cytochrome C assembly protein HQK30_06800 PF04995 Heme exporter protein D (CcmD) HQK30_06805 PF03100 CcmE HQK30_06810 PF01578 Cytochrome C assembly protein HQK30_06810 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HQK30_06815 PF08534 Redoxin HQK30_06820 PF03918 Cytochrome C biogenesis protein HQK30_06830 PF04333 MlaA lipoprotein HQK30_06835 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HQK30_06835 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HQK30_06840 PF00462 Glutaredoxin HQK30_06845 PF01029 NusB family HQK30_06845 PF01189 16S rRNA methyltransferase RsmB/F HQK30_06860 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HQK30_06860 PF01243 Pyridoxamine 5'-phosphate oxidase HQK30_06865 PF00043 Glutathione S-transferase, C-terminal domain HQK30_06865 PF13417 Glutathione S-transferase, N-terminal domain HQK30_06875 PF13508 Acetyltransferase (GNAT) domain HQK30_06890 PF08007 Cupin superfamily protein HQK30_06895 PF00206 Lyase HQK30_06895 PF08328 Adenylosuccinate lyase C-terminal HQK30_06900 PF04356 Protein of unknown function (DUF489) HQK30_06910 PF00293 NUDIX domain HQK30_06915 PF00849 RNA pseudouridylate synthase HQK30_06925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HQK30_06925 PF02378 Phosphotransferase system, EIIC HQK30_06925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HQK30_06930 PF07690 Major Facilitator Superfamily HQK30_06935 PF02378 Phosphotransferase system, EIIC HQK30_06935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HQK30_06935 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HQK30_06945 PF04245 37-kD nucleoid-associated bacterial protein HQK30_06950 PF00583 Acetyltransferase (GNAT) family HQK30_06960 PF00356 Bacterial regulatory proteins, lacI family HQK30_06960 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HQK30_06965 PF00367 phosphotransferase system, EIIB HQK30_06965 PF02378 Phosphotransferase system, EIIC HQK30_06970 PF00155 Aminotransferase class I and II HQK30_06995 PF01238 Phosphomannose isomerase type I HQK30_07000 PF12833 Helix-turn-helix domain HQK30_07005 PF00180 Isocitrate/isopropylmalate dehydrogenase HQK30_07015 PF00291 Pyridoxal-phosphate dependent enzyme HQK30_07020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_07020 PF03466 LysR substrate binding domain HQK30_07040 PF01668 SmpB protein HQK30_07045 PF03364 Polyketide cyclase / dehydrase and lipid transport HQK30_07050 PF03658 RnfH family Ubiquitin HQK30_07055 PF13460 NAD(P)H-binding HQK30_07060 PF04355 SmpA / OmlA family HQK30_07065 PF00465 Iron-containing alcohol dehydrogenase HQK30_07070 PF01048 Phosphorylase superfamily HQK30_07075 PF00849 RNA pseudouridylate synthase HQK30_07080 PF01156 Inosine-uridine preferring nucleoside hydrolase HQK30_07095 PF07509 Protein of unknown function (DUF1523) HQK30_07100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_07100 PF00672 HAMP domain HQK30_07100 PF12729 Four helix bundle sensory module for signal transduction HQK30_07105 PF01810 LysE type translocator HQK30_07115 PF03471 Transporter associated domain HQK30_07115 PF02080 TrkA-C domain HQK30_07115 PF00999 Sodium/hydrogen exchanger family HQK30_07125 PF03471 Transporter associated domain HQK30_07125 PF00999 Sodium/hydrogen exchanger family HQK30_07125 PF02080 TrkA-C domain HQK30_07135 PF02557 D-alanyl-D-alanine carboxypeptidase HQK30_07140 PF07687 Peptidase dimerisation domain HQK30_07140 PF01546 Peptidase family M20/M25/M40 HQK30_07145 PF03960 ArsC family HQK30_07150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_07150 PF03466 LysR substrate binding domain HQK30_07160 PF03606 C4-dicarboxylate anaerobic carrier HQK30_07165 PF07687 Peptidase dimerisation domain HQK30_07165 PF01546 Peptidase family M20/M25/M40 HQK30_07175 PF03605 Anaerobic c4-dicarboxylate membrane transporter HQK30_07180 PF01336 OB-fold nucleic acid binding domain HQK30_07180 PF00152 tRNA synthetases class II (D, K and N) HQK30_07195 PF00202 Aminotransferase class-III HQK30_07200 PF04055 Radical SAM superfamily HQK30_07200 PF06968 Biotin and Thiamin Synthesis associated domain HQK30_07205 PF00155 Aminotransferase class I and II HQK30_07210 PF08241 Methyltransferase domain HQK30_07210 PF12697 Alpha/beta hydrolase family HQK30_07220 PF01435 Peptidase family M48 HQK30_07225 PF08447 PAS fold HQK30_07225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_07225 PF13426 PAS domain HQK30_07230 PF03473 MOSC domain HQK30_07230 PF00111 2Fe-2S iron-sulfur cluster binding domain HQK30_07230 PF00111 2Fe-2S iron-sulfur cluster binding domain HQK30_07230 PF03476 MOSC N-terminal beta barrel domain HQK30_07230 PF03473 MOSC domain HQK30_07230 PF03476 MOSC N-terminal beta barrel domain HQK30_07235 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQK30_07235 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HQK30_07235 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HQK30_07240 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HQK30_07240 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HQK30_07240 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HQK30_07240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQK30_07240 PF10371 Domain of unknown function HQK30_07245 PF01804 Penicillin amidase HQK30_07250 PF12833 Helix-turn-helix domain HQK30_07250 PF02311 AraC-like ligand binding domain HQK30_07255 PF04325 Protein of unknown function (DUF465) HQK30_07265 PF01554 MatE HQK30_07285 PF00291 Pyridoxal-phosphate dependent enzyme HQK30_07295 PF00465 Iron-containing alcohol dehydrogenase HQK30_07305 PF08359 YsiA-like protein, C-terminal region HQK30_07305 PF00440 Bacterial regulatory proteins, tetR family HQK30_07310 PF00171 Aldehyde dehydrogenase family HQK30_07320 PF00877 NlpC/P60 family HQK30_07325 PF07968 Leukocidin/Hemolysin toxin family HQK30_07325 PF12563 Hemolytic toxin N terminal HQK30_07330 PF03466 LysR substrate binding domain HQK30_07330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_07335 PF00578 AhpC/TSA family HQK30_07335 PF10417 C-terminal domain of 1-Cys peroxiredoxin HQK30_07355 PF08003 Protein of unknown function (DUF1698) HQK30_07360 PF13649 Methyltransferase domain HQK30_07365 PF01904 Protein of unknown function DUF72 HQK30_07370 PF02938 GAD domain HQK30_07370 PF00152 tRNA synthetases class II (D, K and N) HQK30_07370 PF01336 OB-fold nucleic acid binding domain HQK30_07375 PF01709 Transcriptional regulator HQK30_07380 PF00884 Sulfatase HQK30_07380 PF08019 Phosphoethanolamine transferase EptA/EptB HQK30_07385 PF00480 ROK family HQK30_07385 PF01047 MarR family HQK30_07390 PF01979 Amidohydrolase family HQK30_07395 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HQK30_07400 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HQK30_07400 PF00367 phosphotransferase system, EIIB HQK30_07400 PF02378 Phosphotransferase system, EIIC HQK30_07405 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain HQK30_07405 PF00728 Glycosyl hydrolase family 20, catalytic domain HQK30_07405 PF02838 Glycosyl hydrolase family 20, domain 2 HQK30_07405 PF03173 Putative carbohydrate binding domain HQK30_07410 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HQK30_07410 PF00749 tRNA synthetases class I (E and Q), catalytic domain HQK30_07415 PF01475 Ferric uptake regulator family HQK30_07425 PF00258 Flavodoxin HQK30_07430 PF01402 Ribbon-helix-helix protein, copG family HQK30_07440 PF12697 Alpha/beta hydrolase family HQK30_07445 PF17206 SeqA protein N-terminal domain HQK30_07445 PF03925 SeqA protein C-terminal domain HQK30_07450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HQK30_07450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HQK30_07450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HQK30_07450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HQK30_07460 PF01047 MarR family HQK30_07475 PF13406 Transglycosylase SLT domain HQK30_07480 PF01066 CDP-alcohol phosphatidyltransferase HQK30_07485 PF00005 ABC transporter HQK30_07495 PF13416 Bacterial extracellular solute-binding protein HQK30_07500 PF00403 Heavy-metal-associated domain HQK30_07500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQK30_07500 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQK30_07505 PF02627 Carboxymuconolactone decarboxylase family HQK30_07515 PF01625 Peptide methionine sulfoxide reductase HQK30_07530 PF07244 Surface antigen variable number repeat HQK30_07530 PF17243 POTRA domain TamA domain 1 HQK30_07530 PF01103 Surface antigen HQK30_07535 PF04357 TamB, inner membrane protein subunit of TAM complex HQK30_07555 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HQK30_07560 PF00990 Diguanylate cyclase, GGDEF domain HQK30_07560 PF03707 Bacterial signalling protein N terminal repeat HQK30_07560 PF00563 EAL domain HQK30_07565 PF01464 Transglycosylase SLT domain HQK30_07565 PF14718 Soluble lytic murein transglycosylase L domain HQK30_07570 PF00356 Bacterial regulatory proteins, lacI family HQK30_07580 PF03061 Thioesterase superfamily HQK30_07590 PF03372 Endonuclease/Exonuclease/phosphatase family HQK30_07595 PF01476 LysM domain HQK30_07595 PF01464 Transglycosylase SLT domain HQK30_07600 PF00753 Metallo-beta-lactamase superfamily HQK30_07600 PF16123 Hydroxyacylglutathione hydrolase C-terminus HQK30_07605 PF08241 Methyltransferase domain HQK30_07610 PF00075 RNase H HQK30_07615 PF00929 Exonuclease HQK30_07625 PF11849 Domain of unknown function (DUF3369) HQK30_07630 PF09317 Domain of unknown function (DUF1974) HQK30_07630 PF02770 Acyl-CoA dehydrogenase, middle domain HQK30_07630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HQK30_07630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HQK30_07635 PF13580 SIS domain HQK30_07640 PF13230 Glutamine amidotransferases class-II HQK30_07650 PF01933 Uncharacterised protein family UPF0052 HQK30_07660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_07660 PF00072 Response regulator receiver domain HQK30_07660 PF09456 RcsC Alpha-Beta-Loop (ABL) HQK30_07660 PF00512 His Kinase A (phospho-acceptor) domain HQK30_07670 PF00072 Response regulator receiver domain HQK30_07670 PF00196 Bacterial regulatory proteins, luxR family HQK30_07675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_07675 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HQK30_07675 PF07730 Histidine kinase HQK30_07675 PF00672 HAMP domain HQK30_07680 PF06463 Molybdenum Cofactor Synthesis C HQK30_07680 PF04055 Radical SAM superfamily HQK30_07685 PF12800 4Fe-4S binding domain HQK30_07685 PF00037 4Fe-4S binding domain HQK30_07685 PF13187 4Fe-4S dicluster domain HQK30_07695 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HQK30_07695 PF01568 Molydopterin dinucleotide binding domain HQK30_07695 PF10518 TAT (twin-arginine translocation) pathway signal sequence HQK30_07695 PF00384 Molybdopterin oxidoreductase HQK30_07700 PF12838 4Fe-4S dicluster domain HQK30_07700 PF12800 4Fe-4S binding domain HQK30_07705 PF12801 4Fe-4S binding domain HQK30_07705 PF12837 4Fe-4S binding domain HQK30_07710 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) HQK30_07715 PF03264 NapC/NirT cytochrome c family, N-terminal region HQK30_07720 PF00994 Probable molybdopterin binding domain HQK30_07725 PF01967 MoaC family HQK30_07730 PF02597 ThiS family HQK30_07735 PF02391 MoaE protein HQK30_07745 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_07750 PF03459 TOBE domain HQK30_07750 PF00005 ABC transporter HQK30_07755 PF00561 alpha/beta hydrolase fold HQK30_07760 PF00899 ThiF family HQK30_07765 PF00994 Probable molybdopterin binding domain HQK30_07765 PF03454 MoeA C-terminal region (domain IV) HQK30_07765 PF03453 MoeA N-terminal region (domain I and II) HQK30_07770 PF01227 GTP cyclohydrolase I HQK30_07775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_07775 PF17200 Single Cache domain 2 HQK30_07775 PF00672 HAMP domain HQK30_07780 PF01268 Formate--tetrahydrofolate ligase HQK30_07790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_07790 PF03466 LysR substrate binding domain HQK30_07795 PF04264 YceI-like domain HQK30_07820 PF07687 Peptidase dimerisation domain HQK30_07820 PF01546 Peptidase family M20/M25/M40 HQK30_07830 PF17944 Arginine decarboxylase C-terminal helical extension HQK30_07830 PF17810 Arginine decarboxylase helical bundle domain HQK30_07830 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HQK30_07840 PF00753 Metallo-beta-lactamase superfamily HQK30_07840 PF14864 Alkyl sulfatase C-terminal HQK30_07840 PF14863 Alkyl sulfatase dimerisation HQK30_07845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_07845 PF03466 LysR substrate binding domain HQK30_07860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_07860 PF00672 HAMP domain HQK30_07870 PF01042 Endoribonuclease L-PSP HQK30_07875 PF03313 Serine dehydratase alpha chain HQK30_07880 PF08348 YheO-like PAS domain HQK30_07880 PF13309 HTH domain HQK30_07885 PF00300 Histidine phosphatase superfamily (branch 1) HQK30_07890 PF04851 Type III restriction enzyme, res subunit HQK30_07890 PF00271 Helicase conserved C-terminal domain HQK30_07900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQK30_07925 PF00849 RNA pseudouridylate synthase HQK30_07925 PF01479 S4 domain HQK30_07930 PF09101 Exotoxin A binding HQK30_07930 PF09009 Exotoxin A catalytic HQK30_07930 PF09102 Exotoxin A, targeting HQK30_07935 PF07690 Major Facilitator Superfamily HQK30_07945 PF03466 LysR substrate binding domain HQK30_07945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_07950 PF07690 Major Facilitator Superfamily HQK30_07960 PF10689 Protein of unknown function (DUF2496) HQK30_07975 PF00892 EamA-like transporter family HQK30_07980 PF04391 Protein of unknown function (DUF533) HQK30_07990 PF00155 Aminotransferase class I and II HQK30_07990 PF00392 Bacterial regulatory proteins, gntR family HQK30_07995 PF01654 Cytochrome bd terminal oxidase subunit I HQK30_08000 PF02322 Cytochrome bd terminal oxidase subunit II HQK30_08020 PF05114 Protein of unknown function (DUF692) HQK30_08035 PF07690 Major Facilitator Superfamily HQK30_08040 PF00248 Aldo/keto reductase family HQK30_08075 PF03466 LysR substrate binding domain HQK30_08075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_08085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_08085 PF00672 HAMP domain HQK30_08085 PF02743 Cache domain HQK30_08090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HQK30_08090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HQK30_08095 PF00230 Major intrinsic protein HQK30_08100 PF07690 Major Facilitator Superfamily HQK30_08105 PF00455 DeoR C terminal sensor domain HQK30_08105 PF08220 DeoR-like helix-turn-helix domain HQK30_08110 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HQK30_08110 PF01266 FAD dependent oxidoreductase HQK30_08115 PF03009 Glycerophosphoryl diester phosphodiesterase family HQK30_08120 PF00793 DAHP synthetase I family HQK30_08125 PF01817 Chorismate mutase type II HQK30_08125 PF02153 Prephenate dehydrogenase HQK30_08130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_08130 PF03466 LysR substrate binding domain HQK30_08135 PF04219 Protein of unknown function, DUF HQK30_08140 PF03974 Ecotin HQK30_08160 PF00326 Prolyl oligopeptidase family HQK30_08160 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HQK30_08165 PF07715 TonB-dependent Receptor Plug Domain HQK30_08165 PF00593 TonB dependent receptor HQK30_08170 PF00884 Sulfatase HQK30_08170 PF11893 Domain of unknown function (DUF3413) HQK30_08175 PF07208 Protein of unknown function (DUF1414) HQK30_08180 PF04245 37-kD nucleoid-associated bacterial protein HQK30_08185 PF01547 Bacterial extracellular solute-binding protein HQK30_08190 PF14785 Maltose transport system permease protein MalF P2 domain HQK30_08190 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_08195 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_08200 PF00005 ABC transporter HQK30_08200 PF08402 TOBE domain HQK30_08205 PF03976 Polyphosphate kinase 2 (PPK2) HQK30_08210 PF00561 alpha/beta hydrolase fold HQK30_08220 PF01594 AI-2E family transporter HQK30_08225 PF01206 Sulfurtransferase TusA HQK30_08230 PF13181 Tetratricopeptide repeat HQK30_08230 PF01435 Peptidase family M48 HQK30_08235 PF00578 AhpC/TSA family HQK30_08240 PF03960 ArsC family HQK30_08255 PF04336 Acyl carrier protein phosphodiesterase HQK30_08260 PF01979 Amidohydrolase family HQK30_08265 PF03956 Lysine exporter LysO HQK30_08270 PF00005 ABC transporter HQK30_08275 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQK30_08280 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_08285 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_08290 PF05159 Capsule polysaccharide biosynthesis protein HQK30_08295 PF05159 Capsule polysaccharide biosynthesis protein HQK30_08300 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HQK30_08305 PF00483 Nucleotidyl transferase HQK30_08310 PF04321 RmlD substrate binding domain HQK30_08315 PF16363 GDP-mannose 4,6 dehydratase HQK30_08320 PF00483 Nucleotidyl transferase HQK30_08330 PF00535 Glycosyl transferase family 2 HQK30_08340 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HQK30_08340 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HQK30_08340 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HQK30_08350 PF00535 Glycosyl transferase family 2 HQK30_08365 PF00005 ABC transporter HQK30_08370 PF01061 ABC-2 type transporter HQK30_08375 PF10531 SLBB domain HQK30_08375 PF02563 Polysaccharide biosynthesis/export protein HQK30_08395 PF04055 Radical SAM superfamily HQK30_08400 PF03707 Bacterial signalling protein N terminal repeat HQK30_08400 PF00990 Diguanylate cyclase, GGDEF domain HQK30_08400 PF00563 EAL domain HQK30_08405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQK30_08405 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQK30_08410 PF11974 Bacterial alpha-2-macroglobulin MG3 domain HQK30_08410 PF17962 Bacterial macroglobulin domain 6 HQK30_08410 PF07678 A-macroglobulin TED domain HQK30_08410 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain HQK30_08410 PF01835 MG2 domain HQK30_08410 PF00207 Alpha-2-macroglobulin family HQK30_08410 PF07703 Alpha-2-macroglobulin bait region domain HQK30_08410 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain HQK30_08410 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain HQK30_08415 PF06832 Penicillin-Binding Protein C-terminus Family HQK30_08415 PF00912 Transglycosylase HQK30_08415 PF00905 Penicillin binding protein transpeptidase domain HQK30_08425 PF02926 THUMP domain HQK30_08425 PF02568 Thiamine biosynthesis protein (ThiI) HQK30_08435 PF03458 UPF0126 domain HQK30_08440 PF00669 Bacterial flagellin N-terminal helical region HQK30_08440 PF00700 Bacterial flagellin C-terminal helical region HQK30_08440 PF07196 Flagellin hook IN motif HQK30_08445 PF07196 Flagellin hook IN motif HQK30_08445 PF00669 Bacterial flagellin N-terminal helical region HQK30_08445 PF00700 Bacterial flagellin C-terminal helical region HQK30_08455 PF07196 Flagellin hook IN motif HQK30_08455 PF07195 Flagellar hook-associated protein 2 C-terminus HQK30_08455 PF02465 Flagellar hook-associated protein 2 N-terminus HQK30_08460 PF02561 Flagellar protein FliS HQK30_08475 PF01497 Periplasmic binding protein HQK30_08485 PF01048 Phosphorylase superfamily HQK30_08495 PF02535 ZIP Zinc transporter HQK30_08500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_08500 PF00672 HAMP domain HQK30_08500 PF12729 Four helix bundle sensory module for signal transduction HQK30_08505 PF00459 Inositol monophosphatase family HQK30_08515 PF02798 Glutathione S-transferase, N-terminal domain HQK30_08515 PF00043 Glutathione S-transferase, C-terminal domain HQK30_08520 PF07690 Major Facilitator Superfamily HQK30_08530 PF05164 Cell division protein ZapA HQK30_08535 PF03695 Uncharacterised protein family (UPF0149) HQK30_08540 PF01494 FAD binding domain HQK30_08545 PF01494 FAD binding domain HQK30_08550 PF01571 Aminomethyltransferase folate-binding domain HQK30_08550 PF08669 Glycine cleavage T-protein C-terminal barrel domain HQK30_08555 PF01597 Glycine cleavage H-protein HQK30_08560 PF02347 Glycine cleavage system P-protein HQK30_08565 PF04055 Radical SAM superfamily HQK30_08565 PF13186 Iron-sulfur cluster-binding domain HQK30_08570 PF00884 Sulfatase HQK30_08575 PF08241 Methyltransferase domain HQK30_08585 PF00989 PAS fold HQK30_08585 PF00512 His Kinase A (phospho-acceptor) domain HQK30_08585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_08590 PF07690 Major Facilitator Superfamily HQK30_08595 PF13192 Thioredoxin domain HQK30_08595 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQK30_08600 PF00578 AhpC/TSA family HQK30_08600 PF10417 C-terminal domain of 1-Cys peroxiredoxin HQK30_08605 PF00571 CBS domain HQK30_08610 PF02547 Queuosine biosynthesis protein HQK30_08615 PF01702 Queuine tRNA-ribosyltransferase HQK30_08620 PF02699 Preprotein translocase subunit HQK30_08625 PF02355 Protein export membrane protein HQK30_08625 PF13721 SecD export protein N-terminal TM region HQK30_08625 PF07549 SecD/SecF GG Motif HQK30_08630 PF02355 Protein export membrane protein HQK30_08630 PF07549 SecD/SecF GG Motif HQK30_08640 PF13181 Tetratricopeptide repeat HQK30_08640 PF07719 Tetratricopeptide repeat HQK30_08645 PF01136 Peptidase family U32 HQK30_08650 PF01136 Peptidase family U32 HQK30_08655 PF02036 SCP-2 sterol transfer family HQK30_08665 PF00588 SpoU rRNA Methylase family HQK30_08670 PF02082 Transcriptional regulator HQK30_08675 PF00266 Aminotransferase class-V HQK30_08680 PF01592 NifU-like N terminal domain HQK30_08685 PF01521 Iron-sulphur cluster biosynthesis HQK30_08690 PF07743 HSCB C-terminal oligomerisation domain HQK30_08695 PF00012 Hsp70 protein HQK30_08700 PF00111 2Fe-2S iron-sulfur cluster binding domain HQK30_08705 PF00883 Cytosol aminopeptidase family, catalytic domain HQK30_08705 PF12404 Peptidase HQK30_08710 PF00883 Cytosol aminopeptidase family, catalytic domain HQK30_08710 PF12404 Peptidase HQK30_08715 PF00334 Nucleoside diphosphate kinase HQK30_08720 PF04055 Radical SAM superfamily HQK30_08730 PF13464 Domain of unknown function (DUF4115) HQK30_08735 PF04551 GcpE protein HQK30_08740 PF03129 Anticodon binding domain HQK30_08740 PF13393 Histidyl-tRNA synthetase HQK30_08745 PF09976 Tetratricopeptide repeat-like domain HQK30_08750 PF13360 PQQ-like domain HQK30_08755 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HQK30_08755 PF01926 50S ribosome-binding GTPase HQK30_08760 PF07191 zinc-ribbons HQK30_08765 PF01464 Transglycosylase SLT domain HQK30_08765 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQK30_08770 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HQK30_08770 PF02769 AIR synthase related protein, C-terminal domain HQK30_08770 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HQK30_08775 PF01966 HD domain HQK30_08780 PF00072 Response regulator receiver domain HQK30_08790 PF00361 Proton-conducting membrane transporter HQK30_08795 PF00361 Proton-conducting membrane transporter HQK30_08800 PF00361 Proton-conducting membrane transporter HQK30_08800 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HQK30_08805 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HQK30_08810 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HQK30_08815 PF12838 4Fe-4S dicluster domain HQK30_08820 PF00146 NADH dehydrogenase HQK30_08825 PF00384 Molybdopterin oxidoreductase HQK30_08825 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HQK30_08825 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HQK30_08830 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HQK30_08830 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HQK30_08840 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HQK30_08840 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HQK30_08845 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HQK30_08850 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HQK30_08855 PF00691 OmpA family HQK30_08855 PF13677 Membrane MotB of proton-channel complex MotA/MotB HQK30_08860 PF01618 MotA/TolQ/ExbB proton channel family HQK30_08880 PF04536 TPM domain HQK30_08890 PF03411 Penicillin-insensitive murein endopeptidase HQK30_08900 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HQK30_08905 PF00248 Aldo/keto reductase family HQK30_08920 PF01212 Beta-eliminating lyase HQK30_08930 PF00072 Response regulator receiver domain HQK30_08935 PF03466 LysR substrate binding domain HQK30_08935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_08945 PF00990 Diguanylate cyclase, GGDEF domain HQK30_08945 PF00563 EAL domain HQK30_08945 PF13188 PAS domain HQK30_08945 PF03707 Bacterial signalling protein N terminal repeat HQK30_08950 PF00881 Nitroreductase family HQK30_08965 PF07690 Major Facilitator Superfamily HQK30_08970 PF03466 LysR substrate binding domain HQK30_08970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_08975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_08975 PF03466 LysR substrate binding domain HQK30_08980 PF00925 GTP cyclohydrolase II HQK30_08985 PF02224 Cytidylate kinase HQK30_08990 PF00575 S1 RNA binding domain HQK30_08995 PF00216 Bacterial DNA-binding protein HQK30_09005 PF18073 Rubredoxin metal binding domain HQK30_09010 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HQK30_09025 PF06508 Queuosine biosynthesis protein QueC HQK30_09030 PF04055 Radical SAM superfamily HQK30_09035 PF12843 Putative quorum-sensing-regulated virulence factor HQK30_09040 PF01923 Cobalamin adenosyltransferase HQK30_09045 PF00816 H-NS histone family HQK30_09050 PF03553 Na+/H+ antiporter family HQK30_09055 PF00265 Thymidine kinase HQK30_09065 PF10722 Putative bacterial sensory transduction regulator HQK30_09075 PF05638 Type VI secretion system effector, Hcp HQK30_09085 PF04717 Type VI secretion system, phage-baseplate injector HQK30_09110 PF05638 Type VI secretion system effector, Hcp HQK30_09115 PF04717 Type VI secretion system, phage-baseplate injector HQK30_09185 PF00004 ATPase family associated with various cellular activities (AAA) HQK30_09185 PF07724 AAA domain (Cdc48 subfamily) HQK30_09185 PF17871 AAA lid domain HQK30_09185 PF10431 C-terminal, D2-small domain, of ClpB protein HQK30_09220 PF04717 Type VI secretion system, phage-baseplate injector HQK30_09290 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HQK30_09290 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HQK30_09295 PF00313 'Cold-shock' DNA-binding domain HQK30_09300 PF02617 ATP-dependent Clp protease adaptor protein ClpS HQK30_09305 PF10431 C-terminal, D2-small domain, of ClpB protein HQK30_09305 PF02861 Clp amino terminal domain, pathogenicity island component HQK30_09305 PF07724 AAA domain (Cdc48 subfamily) HQK30_09305 PF00004 ATPase family associated with various cellular activities (AAA) HQK30_09305 PF17871 AAA lid domain HQK30_09310 PF01176 Translation initiation factor 1A / IF-1 HQK30_09315 PF04376 Arginine-tRNA-protein transferase, N terminus HQK30_09315 PF04377 Arginine-tRNA-protein transferase, C terminus HQK30_09320 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HQK30_09325 PF05433 Glycine zipper 2TM domain HQK30_09330 PF00990 Diguanylate cyclase, GGDEF domain HQK30_09330 PF17158 Membrane-associated sensor, integral membrane domain HQK30_09335 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQK30_09340 PF01037 Lrp/AsnC ligand binding domain HQK30_09345 PF09397 Ftsk gamma domain HQK30_09345 PF01580 FtsK/SpoIIIE family HQK30_09345 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HQK30_09345 PF17854 FtsK alpha domain HQK30_09350 PF03548 Outer membrane lipoprotein carrier protein LolA HQK30_09355 PF16193 AAA C-terminal domain HQK30_09355 PF12002 MgsA AAA+ ATPase C terminal HQK30_09355 PF00004 ATPase family associated with various cellular activities (AAA) HQK30_09360 PF02403 Seryl-tRNA synthetase N-terminal domain HQK30_09360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HQK30_09365 PF02674 Colicin V production protein HQK30_09370 PF00156 Phosphoribosyl transferase domain HQK30_09375 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HQK30_09380 PF00005 ABC transporter HQK30_09385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQK30_09385 PF00005 ABC transporter HQK30_09390 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_09390 PF12911 N-terminal TM domain of oligopeptide transport permease C HQK30_09395 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_09400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQK30_09405 PF00158 Sigma-54 interaction domain HQK30_09405 PF02954 Bacterial regulatory protein, Fis family HQK30_09410 PF04012 PspA/IM30 family HQK30_09415 PF06667 Phage shock protein B HQK30_09425 PF04317 YcjX-like family, DUF463 HQK30_09430 PF05128 Domain of unknown function (DUF697) HQK30_09435 PF00351 Biopterin-dependent aromatic amino acid hydroxylase HQK30_09440 PF01329 Pterin 4 alpha carbinolamine dehydratase HQK30_09450 PF18024 Helix-turn-helix domain HQK30_09450 PF00158 Sigma-54 interaction domain HQK30_09455 PF13689 YfiR/HmsC-like HQK30_09460 PF00990 Diguanylate cyclase, GGDEF domain HQK30_09460 PF03707 Bacterial signalling protein N terminal repeat HQK30_09460 PF00563 EAL domain HQK30_09465 PF00691 OmpA family HQK30_09470 PF03741 Integral membrane protein TerC family HQK30_09480 PF08891 YfcL protein HQK30_09485 PF00501 AMP-binding enzyme HQK30_09490 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region HQK30_09490 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HQK30_09495 PF04172 LrgB-like family HQK30_09500 PF03788 LrgA family HQK30_09515 PF00929 Exonuclease HQK30_09515 PF08411 Exonuclease C-terminal HQK30_09520 PF03466 LysR substrate binding domain HQK30_09520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_09525 PF02678 Pirin HQK30_09525 PF05726 Pirin C-terminal cupin domain HQK30_09530 PF00444 Ribosomal protein L36 HQK30_09535 PF01197 Ribosomal protein L31 HQK30_09550 PF01863 Protein of unknown function DUF45 HQK30_09565 PF03606 C4-dicarboxylate anaerobic carrier HQK30_09575 PF01266 FAD dependent oxidoreductase HQK30_09575 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HQK30_09580 PF00109 Beta-ketoacyl synthase, N-terminal domain HQK30_09580 PF02801 Beta-ketoacyl synthase, C-terminal domain HQK30_09595 PF00285 Citrate synthase, C-terminal domain HQK30_09600 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HQK30_09605 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HQK30_09610 PF02910 Fumarate reductase flavoprotein C-term HQK30_09610 PF00890 FAD binding domain HQK30_09615 PF13085 2Fe-2S iron-sulfur cluster binding domain HQK30_09620 PF16870 2-oxoglutarate dehydrogenase C-terminal HQK30_09620 PF00676 Dehydrogenase E1 component HQK30_09620 PF16078 2-oxoglutarate dehydrogenase N-terminus HQK30_09620 PF02779 Transketolase, pyrimidine binding domain HQK30_09625 PF02817 e3 binding domain HQK30_09625 PF00364 Biotin-requiring enzyme HQK30_09625 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HQK30_09630 PF00549 CoA-ligase HQK30_09630 PF08442 ATP-grasp domain HQK30_09635 PF00549 CoA-ligase HQK30_09635 PF02629 CoA binding domain HQK30_09645 PF00106 short chain dehydrogenase HQK30_09650 PF12833 Helix-turn-helix domain HQK30_09655 PF01810 LysE type translocator HQK30_09660 PF03692 Putative zinc- or iron-chelating domain HQK30_09665 PF01266 FAD dependent oxidoreductase HQK30_09670 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_09675 PF00005 ABC transporter HQK30_09685 PF00392 Bacterial regulatory proteins, gntR family HQK30_09685 PF07702 UTRA domain HQK30_09690 PF00266 Aminotransferase class-V HQK30_09705 PF02901 Pyruvate formate lyase-like HQK30_09705 PF01228 Glycine radical HQK30_09710 PF01226 Formate/nitrite transporter HQK30_09715 PF18381 YcaO cyclodehydratase C-terminal domain HQK30_09715 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding HQK30_09720 PF00893 Small Multidrug Resistance protein HQK30_09725 PF02774 Semialdehyde dehydrogenase, dimerisation domain HQK30_09725 PF01118 Semialdehyde dehydrogenase, NAD binding domain HQK30_09730 PF05193 Peptidase M16 inactive domain HQK30_09730 PF00675 Insulinase (Peptidase family M16) HQK30_09735 PF01053 Cys/Met metabolism PLP-dependent enzyme HQK30_09745 PF13460 NAD(P)H-binding HQK30_09750 PF03466 LysR substrate binding domain HQK30_09750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_09755 PF00106 short chain dehydrogenase HQK30_09760 PF12833 Helix-turn-helix domain HQK30_09765 PF00593 TonB dependent receptor HQK30_09765 PF07715 TonB-dependent Receptor Plug Domain HQK30_09775 PF03466 LysR substrate binding domain HQK30_09775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_09780 PF08267 Cobalamin-independent synthase, N-terminal domain HQK30_09780 PF01717 Cobalamin-independent synthase, Catalytic domain HQK30_09795 PF00571 CBS domain HQK30_09795 PF00478 IMP dehydrogenase / GMP reductase domain HQK30_09800 PF01266 FAD dependent oxidoreductase HQK30_09805 PF04244 Deoxyribodipyrimidine photo-lyase-related protein HQK30_09815 PF01212 Beta-eliminating lyase HQK30_09820 PF00768 D-alanyl-D-alanine carboxypeptidase HQK30_09830 PF03918 Cytochrome C biogenesis protein HQK30_09835 PF08534 Redoxin HQK30_09840 PF01578 Cytochrome C assembly protein HQK30_09840 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HQK30_09845 PF03916 Polysulphide reductase, NrfD HQK30_09850 PF00037 4Fe-4S binding domain HQK30_09850 PF13247 4Fe-4S dicluster domain HQK30_09855 PF13435 Cytochrome c554 and c-prime HQK30_09855 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) HQK30_09860 PF02335 Cytochrome c552 HQK30_09870 PF02754 Cysteine-rich domain HQK30_09870 PF13183 4Fe-4S dicluster domain HQK30_09875 PF00890 FAD binding domain HQK30_09880 PF04324 BFD-like [2Fe-2S] binding domain HQK30_09880 PF01266 FAD dependent oxidoreductase HQK30_09885 PF02810 SEC-C motif HQK30_09890 PF00672 HAMP domain HQK30_09890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_09890 PF17200 Single Cache domain 2 HQK30_09895 PF01047 MarR family HQK30_09895 PF00480 ROK family HQK30_09900 PF17203 Single cache domain 3 HQK30_09900 PF00989 PAS fold HQK30_09900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_09900 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HQK30_09905 PF00072 Response regulator receiver domain HQK30_09905 PF12431 Transcriptional regulator HQK30_09905 PF08279 HTH domain HQK30_09910 PF01970 Tripartite tricarboxylate transporter TctA family HQK30_09925 PF01464 Transglycosylase SLT domain HQK30_09925 PF10145 Phage-related minor tail protein HQK30_09925 PF01551 Peptidase family M23 HQK30_09930 PF02080 TrkA-C domain HQK30_09930 PF06826 Predicted Permease Membrane Region HQK30_09945 PF00271 Helicase conserved C-terminal domain HQK30_09945 PF04851 Type III restriction enzyme, res subunit HQK30_09945 PF02151 UvrB/uvrC motif HQK30_09945 PF12344 Ultra-violet resistance protein B HQK30_09945 PF17757 UvrB interaction domain HQK30_09955 PF09335 SNARE associated Golgi protein HQK30_09960 PF02600 Disulfide bond formation protein DsbB HQK30_09965 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HQK30_09970 PF07840 FadR C-terminal domain HQK30_09970 PF00392 Bacterial regulatory proteins, gntR family HQK30_09975 PF04293 SpoVR like protein HQK30_09980 PF04285 Protein of unknown function (DUF444) HQK30_09985 PF06798 PrkA serine protein kinase C-terminal domain HQK30_09985 PF08298 PrkA AAA domain HQK30_09990 PF16124 RecQ zinc-binding HQK30_09990 PF00270 DEAD/DEAH box helicase HQK30_09990 PF00570 HRDC domain HQK30_09990 PF00271 Helicase conserved C-terminal domain HQK30_09990 PF09382 RQC domain HQK30_09995 PF00375 Sodium:dicarboxylate symporter family HQK30_10000 PF03222 Tryptophan/tyrosine permease family HQK30_10005 PF00293 NUDIX domain HQK30_10010 PF00425 chorismate binding enzyme HQK30_10010 PF04715 Anthranilate synthase component I, N terminal region HQK30_10030 PF00343 Carbohydrate phosphorylase HQK30_10040 PF00939 Sodium:sulfate symporter transmembrane region HQK30_10045 PF00085 Thioredoxin HQK30_10050 PF01627 Hpt domain HQK30_10050 PF00072 Response regulator receiver domain HQK30_10050 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HQK30_10050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_10050 PF00512 His Kinase A (phospho-acceptor) domain HQK30_10050 PF00672 HAMP domain HQK30_10055 PF00664 ABC transporter transmembrane region HQK30_10055 PF00005 ABC transporter HQK30_10060 PF00005 ABC transporter HQK30_10060 PF00664 ABC transporter transmembrane region HQK30_10080 PF01575 MaoC like domain HQK30_10085 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus HQK30_10085 PF00561 alpha/beta hydrolase fold HQK30_10105 PF08543 Phosphomethylpyrimidine kinase HQK30_10110 PF03992 Antibiotic biosynthesis monooxygenase HQK30_10115 PF00465 Iron-containing alcohol dehydrogenase HQK30_10120 PF00583 Acetyltransferase (GNAT) family HQK30_10130 PF01928 CYTH domain HQK30_10150 PF00270 DEAD/DEAH box helicase HQK30_10150 PF00271 Helicase conserved C-terminal domain HQK30_10155 PF00255 Glutathione peroxidase HQK30_10165 PF07478 D-ala D-ala ligase C-terminus HQK30_10165 PF01820 D-ala D-ala ligase N-terminus HQK30_10170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQK30_10170 PF18029 Glyoxalase-like domain HQK30_10180 PF01925 Sulfite exporter TauE/SafE HQK30_10185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_10185 PF03466 LysR substrate binding domain HQK30_10195 PF14525 AraC-binding-like domain HQK30_10195 PF12833 Helix-turn-helix domain HQK30_10200 PF11398 Protein of unknown function (DUF2813) HQK30_10210 PF00128 Alpha amylase, catalytic domain HQK30_10210 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HQK30_10245 PF02789 Cytosol aminopeptidase family, N-terminal domain HQK30_10245 PF00883 Cytosol aminopeptidase family, catalytic domain HQK30_10250 PF13419 Haloacid dehalogenase-like hydrolase HQK30_10255 PF07687 Peptidase dimerisation domain HQK30_10255 PF01546 Peptidase family M20/M25/M40 HQK30_10260 PF00365 Phosphofructokinase HQK30_10265 PF00121 Triosephosphate isomerase HQK30_10270 PF02698 DUF218 domain HQK30_10275 PF13847 Methyltransferase domain HQK30_10280 PF03882 MukF winged-helix domain HQK30_10280 PF17193 MukF C-terminal domain HQK30_10280 PF17192 MukF middle domain HQK30_10285 PF04288 MukE-like family HQK30_10290 PF16330 MukB hinge domain HQK30_10290 PF04310 MukB N-terminal HQK30_10295 PF05036 Sporulation related domain HQK30_10295 PF03330 Lytic transglycolase HQK30_10320 PF01327 Polypeptide deformylase HQK30_10345 PF02567 Phenazine biosynthesis-like protein HQK30_10350 PF08274 PhnA Zinc-Ribbon HQK30_10350 PF03831 PhnA domain HQK30_10360 PF08329 Chitinase A, N-terminal domain HQK30_10360 PF00704 Glycosyl hydrolases family 18 HQK30_10370 PF00300 Histidine phosphatase superfamily (branch 1) HQK30_10375 PF08448 PAS fold HQK30_10375 PF00990 Diguanylate cyclase, GGDEF domain HQK30_10385 PF01713 Smr domain HQK30_10390 PF05175 Methyltransferase small domain HQK30_10395 PF01264 Chorismate synthase HQK30_10405 PF00271 Helicase conserved C-terminal domain HQK30_10405 PF00270 DEAD/DEAH box helicase HQK30_10410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_10420 PF03222 Tryptophan/tyrosine permease family HQK30_10425 PF00356 Bacterial regulatory proteins, lacI family HQK30_10425 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HQK30_10430 PF00381 PTS HPr component phosphorylation site HQK30_10430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HQK30_10435 PF00294 pfkB family carbohydrate kinase HQK30_10440 PF02378 Phosphotransferase system, EIIC HQK30_10440 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HQK30_10445 PF06945 Protein of unknown function (DUF1289) HQK30_10450 PF03562 MltA specific insert domain HQK30_10450 PF06725 3D domain HQK30_10455 PF00111 2Fe-2S iron-sulfur cluster binding domain HQK30_10460 PF00268 Ribonucleotide reductase, small chain HQK30_10465 PF00317 Ribonucleotide reductase, all-alpha domain HQK30_10465 PF03477 ATP cone domain HQK30_10465 PF02867 Ribonucleotide reductase, barrel domain HQK30_10470 PF13419 Haloacid dehalogenase-like hydrolase HQK30_10480 PF00521 DNA gyrase/topoisomerase IV, subunit A HQK30_10480 PF03989 DNA gyrase C-terminal domain, beta-propeller HQK30_10490 PF04055 Radical SAM superfamily HQK30_10500 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HQK30_10500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HQK30_10500 PF03129 Anticodon binding domain HQK30_10500 PF02824 TGS domain HQK30_10505 PF05198 Translation initiation factor IF-3, N-terminal domain HQK30_10505 PF00707 Translation initiation factor IF-3, C-terminal domain HQK30_10510 PF01632 Ribosomal protein L35 HQK30_10515 PF00453 Ribosomal protein L20 HQK30_10520 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HQK30_10520 PF01409 tRNA synthetases class II core domain (F) HQK30_10525 PF03147 Ferredoxin-fold anticodon binding domain HQK30_10525 PF03484 tRNA synthetase B5 domain HQK30_10525 PF03483 B3/4 domain HQK30_10525 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HQK30_10525 PF01588 Putative tRNA binding domain HQK30_10530 PF00216 Bacterial DNA-binding protein HQK30_10535 PF00512 His Kinase A (phospho-acceptor) domain HQK30_10535 PF09456 RcsC Alpha-Beta-Loop (ABL) HQK30_10535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_10535 PF00072 Response regulator receiver domain HQK30_10550 PF02146 Sir2 family HQK30_10560 PF17152 Periplasmic sensor domain HQK30_10560 PF00990 Diguanylate cyclase, GGDEF domain HQK30_10565 PF00356 Bacterial regulatory proteins, lacI family HQK30_10570 PF00294 pfkB family carbohydrate kinase HQK30_10575 PF13407 Periplasmic binding protein domain HQK30_10580 PF02653 Branched-chain amino acid transport system / permease component HQK30_10585 PF00005 ABC transporter HQK30_10590 PF05025 RbsD / FucU transport protein family HQK30_10595 PF13417 Glutathione S-transferase, N-terminal domain HQK30_10610 PF01171 PP-loop family HQK30_10615 PF00582 Universal stress protein family HQK30_10620 PF13545 Crp-like helix-turn-helix domain HQK30_10620 PF00027 Cyclic nucleotide-binding domain HQK30_10635 PF00403 Heavy-metal-associated domain HQK30_10645 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HQK30_10645 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HQK30_10660 PF00115 Cytochrome C and Quinol oxidase polypeptide I HQK30_10670 PF13185 GAF domain HQK30_10675 PF04352 ProQ/FINO family HQK30_10675 PF17516 ProQ C-terminal domain HQK30_10680 PF17804 Tail specific protease N-terminal domain HQK30_10680 PF00595 PDZ domain HQK30_10680 PF11818 C-terminal domain of tail specific protease (DUF3340) HQK30_10680 PF03572 Peptidase family S41 HQK30_10685 PF11940 Domain of unknown function (DUF3458) Ig-like fold HQK30_10685 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HQK30_10685 PF01433 Peptidase family M1 domain HQK30_10695 PF05088 Bacterial NAD-glutamate dehydrogenase HQK30_10700 PF01180 Dihydroorotate dehydrogenase HQK30_10705 PF07126 Cell-division protein ZapC HQK30_10715 PF02926 THUMP domain HQK30_10715 PF10672 S-adenosylmethionine-dependent methyltransferase HQK30_10715 PF01170 Putative RNA methylase family UPF0020 HQK30_10735 PF04957 Ribosome modulation factor HQK30_10740 PF07977 FabA-like domain HQK30_10745 PF13654 AAA domain HQK30_10745 PF05362 Lon protease (S16) C-terminal proteolytic domain HQK30_10780 PF10734 Protein of unknown function (DUF2523) HQK30_10785 PF05707 Zonular occludens toxin (Zot) HQK30_10810 PF07130 YebG protein HQK30_10820 PF00106 short chain dehydrogenase HQK30_10845 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain HQK30_10845 PF06974 Protein of unknown function (DUF1298) HQK30_10860 PF03972 MmgE/PrpD family HQK30_10865 PF00285 Citrate synthase, C-terminal domain HQK30_10880 PF04403 Paraquat-inducible protein A HQK30_10885 PF02470 MlaD protein HQK30_10890 PF01189 16S rRNA methyltransferase RsmB/F HQK30_10890 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HQK30_10890 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HQK30_10900 PF00589 Phage integrase family HQK30_10905 PF01026 TatD related DNase HQK30_10910 PF09115 DNA polymerase III, delta subunit, C terminal HQK30_10915 PF02223 Thymidylate kinase HQK30_10920 PF02618 YceG-like family HQK30_10925 PF01063 Amino-transferase class IV HQK30_10930 PF00109 Beta-ketoacyl synthase, N-terminal domain HQK30_10930 PF02801 Beta-ketoacyl synthase, C-terminal domain HQK30_10935 PF00550 Phosphopantetheine attachment site HQK30_10945 PF00698 Acyl transferase domain HQK30_10950 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HQK30_10950 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HQK30_10955 PF02504 Fatty acid synthesis protein HQK30_10960 PF01783 Ribosomal L32p protein family HQK30_10965 PF02620 Large ribosomal RNA subunit accumulation protein YceD HQK30_10975 PF02545 Maf-like protein HQK30_10980 PF13419 Haloacid dehalogenase-like hydrolase HQK30_10985 PF01479 S4 domain HQK30_10985 PF00849 RNA pseudouridylate synthase HQK30_10990 PF00575 S1 RNA binding domain HQK30_10990 PF12111 Polyribonucleotide phosphorylase C terminal HQK30_10990 PF10150 Ribonuclease E/G family HQK30_10995 PF01384 Phosphate transporter family HQK30_11000 PF00692 dUTPase HQK30_11005 PF00485 Phosphoribulokinase / Uridine kinase family HQK30_11010 PF10609 NUBPL iron-transfer P-loop NTPase HQK30_11015 PF01588 Putative tRNA binding domain HQK30_11015 PF09334 tRNA synthetases class I (M) HQK30_11015 PF08264 Anticodon-binding domain of tRNA HQK30_11020 PF02798 Glutathione S-transferase, N-terminal domain HQK30_11020 PF00043 Glutathione S-transferase, C-terminal domain HQK30_11025 PF00708 Acylphosphatase HQK30_11030 PF00672 HAMP domain HQK30_11030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_11030 PF12729 Four helix bundle sensory module for signal transduction HQK30_11035 PF00669 Bacterial flagellin N-terminal helical region HQK30_11035 PF07196 Flagellin hook IN motif HQK30_11035 PF00700 Bacterial flagellin C-terminal helical region HQK30_11040 PF17785 PUA-like domain HQK30_11040 PF10672 S-adenosylmethionine-dependent methyltransferase HQK30_11055 PF02769 AIR synthase related protein, C-terminal domain HQK30_11055 PF00586 AIR synthase related protein, N-terminal domain HQK30_11065 PF00753 Metallo-beta-lactamase superfamily HQK30_11070 PF00072 Response regulator receiver domain HQK30_11075 PF00672 HAMP domain HQK30_11075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_11075 PF00512 His Kinase A (phospho-acceptor) domain HQK30_11075 PF01627 Hpt domain HQK30_11075 PF00072 Response regulator receiver domain HQK30_11075 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HQK30_11080 PF01386 Ribosomal L25p family HQK30_11090 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HQK30_11090 PF00271 Helicase conserved C-terminal domain HQK30_11090 PF04408 Helicase associated domain (HA2) HQK30_11090 PF11898 Domain of unknown function (DUF3418) HQK30_11090 PF00270 DEAD/DEAH box helicase HQK30_11095 PF01743 Poly A polymerase head domain HQK30_11095 PF02272 DHHA1 domain HQK30_11095 PF01368 DHH family HQK30_11095 PF00571 CBS domain HQK30_11100 PF00196 Bacterial regulatory proteins, luxR family HQK30_11100 PF00072 Response regulator receiver domain HQK30_11115 PF00141 Peroxidase HQK30_11120 PF02575 YbaB/EbfC DNA-binding family HQK30_11125 PF12169 DNA polymerase III subunits gamma and tau domain III HQK30_11125 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HQK30_11125 PF12170 DNA polymerase III tau subunit V interacting with alpha HQK30_11130 PF00156 Phosphoribosyl transferase domain HQK30_11135 PF04304 Protein of unknown function (DUF454) HQK30_11140 PF01207 Dihydrouridine synthase (Dus) HQK30_11150 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQK30_11155 PF01612 3'-5' exonuclease HQK30_11155 PF00570 HRDC domain HQK30_11160 PF00501 AMP-binding enzyme HQK30_11160 PF13193 AMP-binding enzyme C-terminal domain HQK30_11165 PF12697 Alpha/beta hydrolase family HQK30_11175 PF00814 Glycoprotease family HQK30_11180 PF04851 Type III restriction enzyme, res subunit HQK30_11180 PF13307 Helicase C-terminal domain HQK30_11190 PF01634 ATP phosphoribosyltransferase HQK30_11190 PF08029 HisG, C-terminal domain HQK30_11195 PF00815 Histidinol dehydrogenase HQK30_11200 PF00155 Aminotransferase class I and II HQK30_11205 PF08645 Polynucleotide kinase 3 phosphatase HQK30_11205 PF00475 Imidazoleglycerol-phosphate dehydratase HQK30_11210 PF00117 Glutamine amidotransferase class-I HQK30_11215 PF00977 Histidine biosynthesis protein HQK30_11220 PF00072 Response regulator receiver domain HQK30_11230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_11230 PF00512 His Kinase A (phospho-acceptor) domain HQK30_11230 PF01627 Hpt domain HQK30_11230 PF00072 Response regulator receiver domain HQK30_11235 PF00977 Histidine biosynthesis protein HQK30_11240 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HQK30_11240 PF01502 Phosphoribosyl-AMP cyclohydrolase HQK30_11250 PF13280 WYL domain HQK30_11250 PF08279 HTH domain HQK30_11255 PF13193 AMP-binding enzyme C-terminal domain HQK30_11255 PF00501 AMP-binding enzyme HQK30_11260 PF03606 C4-dicarboxylate anaerobic carrier HQK30_11270 PF05433 Glycine zipper 2TM domain HQK30_11280 PF00111 2Fe-2S iron-sulfur cluster binding domain HQK30_11280 PF01799 [2Fe-2S] binding domain HQK30_11285 PF03450 CO dehydrogenase flavoprotein C-terminal domain HQK30_11285 PF00941 FAD binding domain in molybdopterin dehydrogenase HQK30_11290 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HQK30_11290 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HQK30_11295 PF00860 Permease family HQK30_11300 PF01979 Amidohydrolase family HQK30_11305 PF00860 Permease family HQK30_11310 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HQK30_11310 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HQK30_11310 PF01799 [2Fe-2S] binding domain HQK30_11315 PF00941 FAD binding domain in molybdopterin dehydrogenase HQK30_11320 PF01979 Amidohydrolase family HQK30_11325 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HQK30_11325 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQK30_11330 PF12804 MobA-like NTP transferase domain HQK30_11340 PF02625 XdhC and CoxI family HQK30_11340 PF13478 XdhC Rossmann domain HQK30_11345 PF00892 EamA-like transporter family HQK30_11350 PF00696 Amino acid kinase family HQK30_11355 PF01979 Amidohydrolase family HQK30_11360 PF01546 Peptidase family M20/M25/M40 HQK30_11360 PF07687 Peptidase dimerisation domain HQK30_11365 PF00291 Pyridoxal-phosphate dependent enzyme HQK30_11370 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HQK30_11370 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HQK30_11385 PF07152 YaeQ protein HQK30_11395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HQK30_11395 PF00378 Enoyl-CoA hydratase/isomerase HQK30_11395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HQK30_11400 PF00108 Thiolase, N-terminal domain HQK30_11400 PF02803 Thiolase, C-terminal domain HQK30_11405 PF07726 ATPase family associated with various cellular activities (AAA) HQK30_11405 PF17863 AAA lid domain HQK30_11410 PF01882 Protein of unknown function DUF58 HQK30_11435 PF08281 Sigma-70, region 4 HQK30_11435 PF04542 Sigma-70 region 2 HQK30_11445 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HQK30_11450 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HQK30_11455 PF00563 EAL domain HQK30_11455 PF08668 HDOD domain HQK30_11460 PF02803 Thiolase, C-terminal domain HQK30_11460 PF00108 Thiolase, N-terminal domain HQK30_11465 PF09278 MerR, DNA binding HQK30_11465 PF00376 MerR family regulatory protein HQK30_11470 PF00375 Sodium:dicarboxylate symporter family HQK30_11475 PF06865 Pyrimidine/purine nucleoside phosphorylase HQK30_11480 PF03315 Serine dehydratase beta chain HQK30_11480 PF03313 Serine dehydratase alpha chain HQK30_11485 PF03315 Serine dehydratase beta chain HQK30_11485 PF03313 Serine dehydratase alpha chain HQK30_11490 PF13406 Transglycosylase SLT domain HQK30_11495 PF05166 YcgL domain HQK30_11500 PF03775 Septum formation inhibitor MinC, C-terminal domain HQK30_11500 PF05209 Septum formation inhibitor MinC, N-terminal domain HQK30_11505 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HQK30_11510 PF03776 Septum formation topological specificity factor MinE HQK30_11515 PF04269 Protein of unknown function, DUF440 HQK30_11520 PF00912 Transglycosylase HQK30_11525 PF04269 Protein of unknown function, DUF440 HQK30_11535 PF17783 CvfB-like winged helix domain HQK30_11535 PF13509 S1 domain HQK30_11560 PF02525 Flavodoxin-like fold HQK30_11565 PF00892 EamA-like transporter family HQK30_11570 PF01370 NAD dependent epimerase/dehydratase family HQK30_11570 PF02222 ATP-grasp domain HQK30_11575 PF13419 Haloacid dehalogenase-like hydrolase HQK30_11585 PF00677 Lumazine binding domain HQK30_11590 PF06786 Uncharacterised protein family (UPF0253) HQK30_11595 PF01554 MatE HQK30_11625 PF00136 DNA polymerase family B HQK30_11625 PF03104 DNA polymerase family B, exonuclease domain HQK30_11635 PF00990 Diguanylate cyclase, GGDEF domain HQK30_11635 PF13188 PAS domain HQK30_11635 PF00563 EAL domain HQK30_11635 PF03707 Bacterial signalling protein N terminal repeat HQK30_11650 PF03279 Bacterial lipid A biosynthesis acyltransferase HQK30_11655 PF03279 Bacterial lipid A biosynthesis acyltransferase HQK30_11665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_11665 PF03466 LysR substrate binding domain HQK30_11670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HQK30_11670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HQK30_11675 PF01261 Xylose isomerase-like TIM barrel HQK30_11680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_11680 PF03466 LysR substrate binding domain HQK30_11690 PF01966 HD domain HQK30_11695 PF00232 Glycosyl hydrolase family 1 HQK30_11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_11700 PF03466 LysR substrate binding domain HQK30_11705 PF00534 Glycosyl transferases group 1 HQK30_11705 PF00862 Sucrose synthase HQK30_11710 PF00534 Glycosyl transferases group 1 HQK30_11770 PF13439 Glycosyltransferase Family 4 HQK30_11770 PF00534 Glycosyl transferases group 1 HQK30_11775 PF03552 Cellulose synthase HQK30_11775 PF00535 Glycosyl transferase family 2 HQK30_11775 PF07238 PilZ domain HQK30_11780 PF02397 Bacterial sugar transferase HQK30_11785 PF00534 Glycosyl transferases group 1 HQK30_11790 PF00072 Response regulator receiver domain HQK30_11790 PF00211 Adenylate and Guanylate cyclase catalytic domain HQK30_11820 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HQK30_11820 PF00072 Response regulator receiver domain HQK30_11820 PF00672 HAMP domain HQK30_11820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_11820 PF00512 His Kinase A (phospho-acceptor) domain HQK30_11820 PF01627 Hpt domain HQK30_11825 PF12706 Beta-lactamase superfamily domain HQK30_11830 PF00248 Aldo/keto reductase family HQK30_11835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_11835 PF03466 LysR substrate binding domain HQK30_11845 PF07676 WD40-like Beta Propeller Repeat HQK30_11845 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region HQK30_11845 PF00326 Prolyl oligopeptidase family HQK30_11850 PF12146 Serine aminopeptidase, S33 HQK30_11855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_11855 PF03466 LysR substrate binding domain HQK30_11865 PF01925 Sulfite exporter TauE/SafE HQK30_11870 PF13520 Amino acid permease HQK30_11880 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HQK30_11880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HQK30_11885 PF00378 Enoyl-CoA hydratase/isomerase HQK30_11890 PF00378 Enoyl-CoA hydratase/isomerase HQK30_11895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HQK30_11895 PF02770 Acyl-CoA dehydrogenase, middle domain HQK30_11895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HQK30_11900 PF00171 Aldehyde dehydrogenase family HQK30_11905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HQK30_11905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HQK30_11905 PF02770 Acyl-CoA dehydrogenase, middle domain HQK30_11910 PF01039 Carboxyl transferase domain HQK30_11915 PF00378 Enoyl-CoA hydratase/isomerase HQK30_11920 PF00364 Biotin-requiring enzyme HQK30_11920 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HQK30_11920 PF00289 Biotin carboxylase, N-terminal domain HQK30_11920 PF02785 Biotin carboxylase C-terminal domain HQK30_11925 PF00682 HMGL-like HQK30_11930 PF09278 MerR, DNA binding HQK30_11930 PF00376 MerR family regulatory protein HQK30_11945 PF01184 GPR1/FUN34/yaaH family HQK30_11950 PF06167 Glucose-regulated metallo-peptidase M90 HQK30_11960 PF01235 Sodium:alanine symporter family HQK30_11990 PF00378 Enoyl-CoA hydratase/isomerase HQK30_12005 PF04341 Protein of unknown function, DUF485 HQK30_12010 PF00474 Sodium:solute symporter family HQK30_12015 PF00005 ABC transporter HQK30_12015 PF12848 ABC transporter HQK30_12025 PF00216 Bacterial DNA-binding protein HQK30_12030 PF02190 ATP-dependent protease La (LON) substrate-binding domain HQK30_12030 PF05362 Lon protease (S16) C-terminal proteolytic domain HQK30_12030 PF00004 ATPase family associated with various cellular activities (AAA) HQK30_12035 PF07724 AAA domain (Cdc48 subfamily) HQK30_12035 PF10431 C-terminal, D2-small domain, of ClpB protein HQK30_12035 PF06689 ClpX C4-type zinc finger HQK30_12040 PF00574 Clp protease HQK30_12045 PF05697 Bacterial trigger factor protein (TF) HQK30_12045 PF05698 Bacterial trigger factor protein (TF) C-terminus HQK30_12045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HQK30_12060 PF02687 FtsX-like permease family HQK30_12060 PF12704 MacB-like periplasmic core domain HQK30_12065 PF00005 ABC transporter HQK30_12070 PF12704 MacB-like periplasmic core domain HQK30_12070 PF02687 FtsX-like permease family HQK30_12080 PF00271 Helicase conserved C-terminal domain HQK30_12080 PF17757 UvrB interaction domain HQK30_12080 PF02559 CarD-like/TRCF domain HQK30_12080 PF03461 TRCF domain HQK30_12080 PF00270 DEAD/DEAH box helicase HQK30_12085 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HQK30_12090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQK30_12095 PF00892 EamA-like transporter family HQK30_12105 PF00300 Histidine phosphatase superfamily (branch 1) HQK30_12110 PF05193 Peptidase M16 inactive domain HQK30_12110 PF00675 Insulinase (Peptidase family M16) HQK30_12115 PF05724 Thiopurine S-methyltransferase (TPMT) HQK30_12130 PF02805 Metal binding domain of Ada HQK30_12130 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HQK30_12130 PF12833 Helix-turn-helix domain HQK30_12130 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HQK30_12150 PF00117 Glutamine amidotransferase class-I HQK30_12150 PF00958 GMP synthase C terminal domain HQK30_12150 PF02540 NAD synthase HQK30_12155 PF00571 CBS domain HQK30_12155 PF00478 IMP dehydrogenase / GMP reductase domain HQK30_12160 PF02705 K+ potassium transporter HQK30_12170 PF01618 MotA/TolQ/ExbB proton channel family HQK30_12175 PF02472 Biopolymer transport protein ExbD/TolR HQK30_12180 PF00892 EamA-like transporter family HQK30_12185 PF02601 Exonuclease VII, large subunit HQK30_12185 PF13742 OB-fold nucleic acid binding domain HQK30_12190 PF04055 Radical SAM superfamily HQK30_12195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_12195 PF00672 HAMP domain HQK30_12200 PF00793 DAHP synthetase I family HQK30_12205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HQK30_12210 PF00266 Aminotransferase class-V HQK30_12215 PF01012 Electron transfer flavoprotein domain HQK30_12215 PF00766 Electron transfer flavoprotein FAD-binding domain HQK30_12220 PF01012 Electron transfer flavoprotein domain HQK30_12230 PF01544 CorA-like Mg2+ transporter protein HQK30_12235 PF11143 Protein of unknown function (DUF2919) HQK30_12250 PF00593 TonB dependent receptor HQK30_12250 PF07715 TonB-dependent Receptor Plug Domain HQK30_12255 PF01032 FecCD transport family HQK30_12260 PF01032 FecCD transport family HQK30_12265 PF00005 ABC transporter HQK30_12270 PF01648 4'-phosphopantetheinyl transferase superfamily HQK30_12270 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HQK30_12275 PF01497 Periplasmic binding protein HQK30_12280 PF13193 AMP-binding enzyme C-terminal domain HQK30_12280 PF00550 Phosphopantetheine attachment site HQK30_12280 PF00668 Condensation domain HQK30_12280 PF00501 AMP-binding enzyme HQK30_12280 PF00975 Thioesterase domain HQK30_12285 PF00550 Phosphopantetheine attachment site HQK30_12285 PF07993 Male sterility protein HQK30_12285 PF13193 AMP-binding enzyme C-terminal domain HQK30_12285 PF00501 AMP-binding enzyme HQK30_12285 PF00668 Condensation domain HQK30_12295 PF00550 Phosphopantetheine attachment site HQK30_12295 PF00668 Condensation domain HQK30_12295 PF13193 AMP-binding enzyme C-terminal domain HQK30_12295 PF00975 Thioesterase domain HQK30_12295 PF00501 AMP-binding enzyme HQK30_12300 PF00550 Phosphopantetheine attachment site HQK30_12300 PF00857 Isochorismatase family HQK30_12305 PF00501 AMP-binding enzyme HQK30_12305 PF13193 AMP-binding enzyme C-terminal domain HQK30_12310 PF00425 chorismate binding enzyme HQK30_12315 PF07273 Protein of unknown function (DUF1439) HQK30_12325 PF00483 Nucleotidyl transferase HQK30_12330 PF00990 Diguanylate cyclase, GGDEF domain HQK30_12330 PF00563 EAL domain HQK30_12330 PF03707 Bacterial signalling protein N terminal repeat HQK30_12345 PF00294 pfkB family carbohydrate kinase HQK30_12350 PF01124 MAPEG family HQK30_12355 PF00762 Ferrochelatase HQK30_12360 PF05191 Adenylate kinase, active site lid HQK30_12365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_12365 PF00183 Hsp90 protein HQK30_12370 PF13662 Toprim domain HQK30_12370 PF02132 RecR protein HQK30_12375 PF02634 FdhD/NarQ family HQK30_12380 PF00158 Sigma-54 interaction domain HQK30_12380 PF01590 GAF domain HQK30_12380 PF02954 Bacterial regulatory protein, Fis family HQK30_12395 PF13247 4Fe-4S dicluster domain HQK30_12395 PF12800 4Fe-4S binding domain HQK30_12405 PF13476 AAA domain HQK30_12410 PF02705 K+ potassium transporter HQK30_12420 PF07690 Major Facilitator Superfamily HQK30_12425 PF13419 Haloacid dehalogenase-like hydrolase HQK30_12430 PF08240 Alcohol dehydrogenase GroES-like domain HQK30_12430 PF00107 Zinc-binding dehydrogenase HQK30_12435 PF00202 Aminotransferase class-III HQK30_12440 PF12798 4Fe-4S binding domain HQK30_12440 PF00037 4Fe-4S binding domain HQK30_12445 PF00361 Proton-conducting membrane transporter HQK30_12450 PF00146 NADH dehydrogenase HQK30_12455 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HQK30_12455 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HQK30_12455 PF00374 Nickel-dependent hydrogenase HQK30_12460 PF12838 4Fe-4S dicluster domain HQK30_12465 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HQK30_12470 PF07450 Formate hydrogenlyase maturation protein HycH HQK30_12475 PF01750 Hydrogenase maturation protease HQK30_12485 PF12390 Selenocysteine synthase N terminal HQK30_12485 PF03841 L-seryl-tRNA selenium transferase HQK30_12490 PF09105 Elongation factor SelB, winged helix HQK30_12490 PF00009 Elongation factor Tu GTP binding domain HQK30_12490 PF09106 Elongation factor SelB, winged helix HQK30_12490 PF03144 Elongation factor Tu domain 2 HQK30_12490 PF09107 Elongation factor SelB, winged helix HQK30_12495 PF01300 Telomere recombination HQK30_12495 PF17788 HypF Kae1-like domain HQK30_12495 PF00708 Acylphosphatase HQK30_12495 PF07503 HypF finger HQK30_12500 PF01455 HupF/HypC family HQK30_12505 PF01924 Hydrogenase formation hypA family HQK30_12510 PF02769 AIR synthase related protein, C-terminal domain HQK30_12510 PF00586 AIR synthase related protein, N-terminal domain HQK30_12515 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HQK30_12520 PF02492 CobW/HypB/UreG, nucleotide-binding domain HQK30_12525 PF08402 TOBE domain HQK30_12525 PF00005 ABC transporter HQK30_12530 PF00005 ABC transporter HQK30_12535 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_12535 PF12911 N-terminal TM domain of oligopeptide transport permease C HQK30_12540 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_12545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQK30_12550 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE HQK30_12555 PF01750 Hydrogenase maturation protease HQK30_12560 PF00374 Nickel-dependent hydrogenase HQK30_12565 PF03916 Polysulphide reductase, NrfD HQK30_12570 PF13247 4Fe-4S dicluster domain HQK30_12575 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HQK30_12575 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HQK30_12580 PF00072 Response regulator receiver domain HQK30_12590 PF01627 Hpt domain HQK30_12590 PF09078 CheY binding HQK30_12590 PF02895 Signal transducing histidine kinase, homodimeric domain HQK30_12590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_12590 PF01584 CheW-like domain HQK30_12595 PF17202 Single cache domain 3 HQK30_12595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_12595 PF00672 HAMP domain HQK30_12600 PF01584 CheW-like domain HQK30_12605 PF01739 CheR methyltransferase, SAM binding domain HQK30_12605 PF03705 CheR methyltransferase, all-alpha domain HQK30_12610 PF01339 CheB methylesterase HQK30_12610 PF00072 Response regulator receiver domain HQK30_12615 PF00990 Diguanylate cyclase, GGDEF domain HQK30_12615 PF00563 EAL domain HQK30_12615 PF03707 Bacterial signalling protein N terminal repeat HQK30_12620 PF00672 HAMP domain HQK30_12620 PF12729 Four helix bundle sensory module for signal transduction HQK30_12620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_12625 PF00842 Alanine racemase, C-terminal domain HQK30_12625 PF01168 Alanine racemase, N-terminal domain HQK30_12640 PF01740 STAS domain HQK30_12640 PF00916 Sulfate permease family HQK30_12670 PF03239 Iron permease FTR1 family HQK30_12675 PF01593 Flavin containing amine oxidoreductase HQK30_12690 PF07690 Major Facilitator Superfamily HQK30_12710 PF00005 ABC transporter HQK30_12740 PF01565 FAD binding domain HQK30_12740 PF02913 FAD linked oxidases, C-terminal domain HQK30_12745 PF02589 LUD domain HQK30_12750 PF02589 LUD domain HQK30_12750 PF11870 Domain of unknown function (DUF3390) HQK30_12750 PF13183 4Fe-4S dicluster domain HQK30_12755 PF02754 Cysteine-rich domain HQK30_12760 PF02652 L-lactate permease HQK30_12765 PF03466 LysR substrate binding domain HQK30_12765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_12770 PF00561 alpha/beta hydrolase fold HQK30_12790 PF01625 Peptide methionine sulfoxide reductase HQK30_12795 PF00583 Acetyltransferase (GNAT) family HQK30_12795 PF00696 Amino acid kinase family HQK30_12800 PF00696 Amino acid kinase family HQK30_12800 PF01842 ACT domain HQK30_12810 PF00884 Sulfatase HQK30_12815 PF17676 LD-carboxypeptidase C-terminal domain HQK30_12815 PF02016 LD-carboxypeptidase N-terminal domain HQK30_12825 PF01906 Putative heavy-metal-binding HQK30_12845 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQK30_12850 PF05728 Uncharacterised protein family (UPF0227) HQK30_12855 PF00860 Permease family HQK30_12860 PF08439 Oligopeptidase F HQK30_12860 PF01432 Peptidase family M3 HQK30_12865 PF01432 Peptidase family M3 HQK30_12865 PF08439 Oligopeptidase F HQK30_12870 PF05661 Protein of unknown function (DUF808) HQK30_12885 PF08447 PAS fold HQK30_12885 PF13426 PAS domain HQK30_12885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_12890 PF02355 Protein export membrane protein HQK30_12890 PF07549 SecD/SecF GG Motif HQK30_12895 PF13721 SecD export protein N-terminal TM region HQK30_12895 PF02355 Protein export membrane protein HQK30_12895 PF07549 SecD/SecF GG Motif HQK30_12930 PF01230 HIT domain HQK30_12935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_12935 PF00672 HAMP domain HQK30_12945 PF01979 Amidohydrolase family HQK30_12960 PF00375 Sodium:dicarboxylate symporter family HQK30_12970 PF00842 Alanine racemase, C-terminal domain HQK30_12970 PF01168 Alanine racemase, N-terminal domain HQK30_12975 PF03741 Integral membrane protein TerC family HQK30_12980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQK30_12980 PF00005 ABC transporter HQK30_12985 PF00005 ABC transporter HQK30_12985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQK30_12990 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_12990 PF12911 N-terminal TM domain of oligopeptide transport permease C HQK30_12995 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_13000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQK30_13005 PF01914 MarC family integral membrane protein HQK30_13015 PF00171 Aldehyde dehydrogenase family HQK30_13015 PF00465 Iron-containing alcohol dehydrogenase HQK30_13020 PF01966 HD domain HQK30_13025 PF07694 5TMR of 5TMR-LYT HQK30_13025 PF06580 Histidine kinase HQK30_13030 PF00072 Response regulator receiver domain HQK30_13030 PF04397 LytTr DNA-binding domain HQK30_13035 PF02554 Carbon starvation protein CstA HQK30_13040 PF11742 Protein of unknown function (DUF3302) HQK30_13045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HQK30_13045 PF00529 HlyD membrane-fusion protein of T1SS HQK30_13050 PF04851 Type III restriction enzyme, res subunit HQK30_13050 PF00271 Helicase conserved C-terminal domain HQK30_13055 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HQK30_13060 PF00462 Glutaredoxin HQK30_13070 PF00155 Aminotransferase class I and II HQK30_13075 PF12794 Mechanosensitive ion channel inner membrane domain 1 HQK30_13075 PF12795 Mechanosensitive ion channel porin domain HQK30_13075 PF00924 Mechanosensitive ion channel HQK30_13080 PF03606 C4-dicarboxylate anaerobic carrier HQK30_13085 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HQK30_13085 PF07055 Enoyl reductase FAD binding domain HQK30_13085 PF12241 Trans-2-enoyl-CoA reductase catalytic region HQK30_13090 PF13426 PAS domain HQK30_13090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_13090 PF08447 PAS fold HQK30_13095 PF00892 EamA-like transporter family HQK30_13100 PF02508 Rnf-Nqr subunit, membrane protein HQK30_13105 PF04060 Putative Fe-S cluster HQK30_13110 PF10531 SLBB domain HQK30_13110 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HQK30_13110 PF12838 4Fe-4S dicluster domain HQK30_13110 PF13375 RnfC Barrel sandwich hybrid domain HQK30_13115 PF03116 NQR2, RnfD, RnfE family HQK30_13120 PF04205 FMN-binding domain HQK30_13125 PF02508 Rnf-Nqr subunit, membrane protein HQK30_13130 PF00730 HhH-GPD superfamily base excision DNA repair protein HQK30_13130 PF00633 Helix-hairpin-helix motif HQK30_13130 PF10576 Iron-sulfur binding domain of endonuclease III HQK30_13135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQK30_13140 PF18393 MotY N-terminal domain HQK30_13140 PF00691 OmpA family HQK30_13145 PF00672 HAMP domain HQK30_13145 PF12729 Four helix bundle sensory module for signal transduction HQK30_13145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_13150 PF00929 Exonuclease HQK30_13155 PF13726 Na+-H+ antiporter family HQK30_13155 PF03553 Na+/H+ antiporter family HQK30_13160 PF00270 DEAD/DEAH box helicase HQK30_13160 PF00271 Helicase conserved C-terminal domain HQK30_13160 PF03880 DbpA RNA binding domain HQK30_13165 PF03061 Thioesterase superfamily HQK30_13175 PF02913 FAD linked oxidases, C-terminal domain HQK30_13175 PF01565 FAD binding domain HQK30_13175 PF13183 4Fe-4S dicluster domain HQK30_13185 PF03471 Transporter associated domain HQK30_13185 PF03741 Integral membrane protein TerC family HQK30_13190 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HQK30_13195 PF00962 Adenosine/AMP deaminase HQK30_13200 PF13344 Haloacid dehalogenase-like hydrolase HQK30_13205 PF02254 TrkA-N domain HQK30_13205 PF00999 Sodium/hydrogen exchanger family HQK30_13215 PF13537 Glutamine amidotransferase domain HQK30_13215 PF00733 Asparagine synthase HQK30_13225 PF02798 Glutathione S-transferase, N-terminal domain HQK30_13225 PF14497 Glutathione S-transferase, C-terminal domain HQK30_13235 PF04209 homogentisate 1,2-dioxygenase HQK30_13240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQK30_13250 PF00849 RNA pseudouridylate synthase HQK30_13255 PF00990 Diguanylate cyclase, GGDEF domain HQK30_13255 PF13426 PAS domain HQK30_13255 PF00563 EAL domain HQK30_13260 PF08447 PAS fold HQK30_13260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_13270 PF03706 Lysylphosphatidylglycerol synthase TM region HQK30_13270 PF09924 Uncharacterised conserved protein (DUF2156) HQK30_13275 PF00884 Sulfatase HQK30_13275 PF08019 Phosphoethanolamine transferase EptA/EptB HQK30_13295 PF01027 Inhibitor of apoptosis-promoting Bax1 HQK30_13300 PF12805 FUSC-like inner membrane protein yccS HQK30_13305 PF04358 DsrC like protein HQK30_13310 PF05036 Sporulation related domain HQK30_13315 PF02875 Mur ligase family, glutamate ligase domain HQK30_13315 PF08245 Mur ligase middle domain HQK30_13320 PF17848 Acetyl-coA carboxylase zinc finger domain HQK30_13320 PF01039 Carboxyl transferase domain HQK30_13325 PF01416 tRNA pseudouridine synthase HQK30_13335 PF01118 Semialdehyde dehydrogenase, NAD binding domain HQK30_13335 PF02774 Semialdehyde dehydrogenase, dimerisation domain HQK30_13340 PF11890 Domain of unknown function (DUF3410) HQK30_13340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HQK30_13340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HQK30_13345 PF01569 PAP2 superfamily HQK30_13350 PF03180 NLPA lipoprotein HQK30_13370 PF00082 Subtilase family HQK30_13370 PF01483 Proprotein convertase P-domain HQK30_13380 PF14310 Fibronectin type III-like domain HQK30_13380 PF00933 Glycosyl hydrolase family 3 N terminal domain HQK30_13380 PF01915 Glycosyl hydrolase family 3 C-terminal domain HQK30_13390 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HQK30_13390 PF02896 PEP-utilising enzyme, TIM barrel domain HQK30_13390 PF00391 PEP-utilising enzyme, mobile domain HQK30_13395 PF03618 Kinase/pyrophosphorylase HQK30_13405 PF00324 Amino acid permease HQK30_13460 PF00664 ABC transporter transmembrane region HQK30_13460 PF03412 Peptidase C39 family HQK30_13460 PF00005 ABC transporter HQK30_13465 PF16199 Radical_SAM C-terminal domain HQK30_13465 PF04055 Radical SAM superfamily HQK30_13470 PF01645 Conserved region in glutamate synthase HQK30_13470 PF04898 Glutamate synthase central domain HQK30_13470 PF00310 Glutamine amidotransferases class-II HQK30_13470 PF01493 GXGXG motif HQK30_13475 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQK30_13475 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HQK30_13490 PF09278 MerR, DNA binding HQK30_13490 PF00376 MerR family regulatory protein HQK30_13505 PF14521 Lysine-specific metallo-endopeptidase HQK30_13515 PF00271 Helicase conserved C-terminal domain HQK30_13515 PF00270 DEAD/DEAH box helicase HQK30_13520 PF13302 Acetyltransferase (GNAT) domain HQK30_13550 PF08378 Nuclease-related domain HQK30_13555 PF07759 Protein of unknown function (DUF1615) HQK30_13565 PF00682 HMGL-like HQK30_13565 PF08502 LeuA allosteric (dimerisation) domain HQK30_13570 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HQK30_13570 PF02142 MGS-like domain HQK30_13570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HQK30_13575 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HQK30_13575 PF00117 Glutamine amidotransferase class-I HQK30_13580 PF01113 Dihydrodipicolinate reductase, N-terminus HQK30_13580 PF05173 Dihydrodipicolinate reductase, C-terminus HQK30_13590 PF01812 5-formyltetrahydrofolate cyclo-ligase family HQK30_13595 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HQK30_13600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HQK30_13600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HQK30_13600 PF01842 ACT domain HQK30_13605 PF01219 Prokaryotic diacylglycerol kinase HQK30_13610 PF00793 DAHP synthetase I family HQK30_13615 PF00005 ABC transporter HQK30_13620 PF01032 FecCD transport family HQK30_13625 PF00512 His Kinase A (phospho-acceptor) domain HQK30_13625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_13625 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQK30_13625 PF00072 Response regulator receiver domain HQK30_13625 PF01627 Hpt domain HQK30_13625 PF00989 PAS fold HQK30_13635 PF00437 Type II/IV secretion system protein HQK30_13640 PF00483 Nucleotidyl transferase HQK30_13655 PF02421 Ferrous iron transport protein B HQK30_13655 PF07664 Ferrous iron transport protein B C terminus HQK30_13655 PF07670 Nucleoside recognition HQK30_13665 PF01253 Translation initiation factor SUI1 HQK30_13670 PF01169 Uncharacterized protein family UPF0016 HQK30_13700 PF13185 GAF domain HQK30_13700 PF00990 Diguanylate cyclase, GGDEF domain HQK30_13715 PF00271 Helicase conserved C-terminal domain HQK30_13720 PF01406 tRNA synthetases class I (C) catalytic domain HQK30_13720 PF09190 DALR domain HQK30_13725 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HQK30_13735 PF00149 Calcineurin-like phosphoesterase HQK30_13740 PF03916 Polysulphide reductase, NrfD HQK30_13745 PF00037 4Fe-4S binding domain HQK30_13745 PF13247 4Fe-4S dicluster domain HQK30_13765 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) HQK30_13770 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB HQK30_13795 PF01066 CDP-alcohol phosphatidyltransferase HQK30_13800 PF01541 GIY-YIG catalytic domain HQK30_13800 PF02151 UvrB/uvrC motif HQK30_13800 PF08459 UvrC Helix-hairpin-helix N-terminal HQK30_13805 PF00072 Response regulator receiver domain HQK30_13805 PF00196 Bacterial regulatory proteins, luxR family HQK30_13810 PF02348 Cytidylyltransferase HQK30_13815 PF03966 Trm112p-like protein HQK30_13820 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HQK30_13825 PF00005 ABC transporter HQK30_13825 PF00664 ABC transporter transmembrane region HQK30_13830 PF00753 Metallo-beta-lactamase superfamily HQK30_13830 PF03772 Competence protein HQK30_13845 PF05872 Bacterial protein of unknown function (DUF853) HQK30_13850 PF00155 Aminotransferase class I and II HQK30_13860 PF13609 Gram-negative porin HQK30_13865 PF13307 Helicase C-terminal domain HQK30_13865 PF06733 DEAD_2 HQK30_13875 PF00850 Histone deacetylase domain HQK30_13880 PF07690 Major Facilitator Superfamily HQK30_13885 PF01926 50S ribosome-binding GTPase HQK30_13890 PF00245 Alkaline phosphatase HQK30_13895 PF00245 Alkaline phosphatase HQK30_13910 PF01272 Transcription elongation factor, GreA/GreB, C-term HQK30_13910 PF14760 Rnk N-terminus HQK30_13915 PF00072 Response regulator receiver domain HQK30_13915 PF00196 Bacterial regulatory proteins, luxR family HQK30_13920 PF07730 Histidine kinase HQK30_13920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_13920 PF05231 MASE1 HQK30_13925 PF07690 Major Facilitator Superfamily HQK30_13930 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQK30_13935 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_13940 PF00005 ABC transporter HQK30_13955 PF04116 Fatty acid hydroxylase superfamily HQK30_13960 PF13520 Amino acid permease HQK30_13975 PF01595 Cyclin M transmembrane N-terminal domain HQK30_13975 PF00571 CBS domain HQK30_13975 PF03471 Transporter associated domain HQK30_13990 PF02371 Transposase IS116/IS110/IS902 family HQK30_13990 PF01548 Transposase HQK30_14020 PF01895 PhoU domain HQK30_14025 PF00005 ABC transporter HQK30_14030 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_14035 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_14040 PF14437 MafB19-like deaminase HQK30_14055 PF01274 Malate synthase HQK30_14060 PF00463 Isocitrate lyase family HQK30_14065 PF00308 Bacterial dnaA protein HQK30_14080 PF02769 AIR synthase related protein, C-terminal domain HQK30_14080 PF00586 AIR synthase related protein, N-terminal domain HQK30_14085 PF00551 Formyl transferase HQK30_14090 PF01784 NIF3 (NGG1p interacting factor 3) HQK30_14095 PF02954 Bacterial regulatory protein, Fis family HQK30_14095 PF00072 Response regulator receiver domain HQK30_14095 PF00158 Sigma-54 interaction domain HQK30_14100 PF00512 His Kinase A (phospho-acceptor) domain HQK30_14100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_14100 PF00989 PAS fold HQK30_14105 PF02954 Bacterial regulatory protein, Fis family HQK30_14105 PF00158 Sigma-54 interaction domain HQK30_14105 PF06490 Flagellar regulatory protein FleQ HQK30_14115 PF01842 ACT domain HQK30_14120 PF13090 Polyphosphate kinase C-terminal domain 2 HQK30_14120 PF17941 Polyphosphate kinase C-terminal domain 1 HQK30_14120 PF13089 Polyphosphate kinase N-terminal domain HQK30_14120 PF02503 Polyphosphate kinase middle domain HQK30_14125 PF02541 Ppx/GppA phosphatase family HQK30_14130 PF03448 MgtE intracellular N domain HQK30_14130 PF01769 Divalent cation transporter HQK30_14130 PF00571 CBS domain HQK30_14135 PF00669 Bacterial flagellin N-terminal helical region HQK30_14140 PF00460 Flagella basal body rod protein HQK30_14140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HQK30_14145 PF10135 Rod binding protein HQK30_14145 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HQK30_14150 PF02119 Flagellar P-ring protein HQK30_14155 PF02107 Flagellar L-ring protein HQK30_14160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HQK30_14160 PF00460 Flagella basal body rod protein HQK30_14165 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HQK30_14165 PF00460 Flagella basal body rod protein HQK30_14170 PF07559 Flagellar basal body protein FlaE HQK30_14170 PF00460 Flagella basal body rod protein HQK30_14170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HQK30_14180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HQK30_14180 PF00460 Flagella basal body rod protein HQK30_14185 PF00460 Flagella basal body rod protein HQK30_14190 PF03705 CheR methyltransferase, all-alpha domain HQK30_14190 PF01739 CheR methyltransferase, SAM binding domain HQK30_14195 PF00072 Response regulator receiver domain HQK30_14195 PF01584 CheW-like domain HQK30_14200 PF13144 Chaperone for flagella basal body P-ring formation HQK30_14215 PF12850 Calcineurin-like phosphoesterase superfamily domain HQK30_14220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQK30_14230 PF01479 S4 domain HQK30_14230 PF00849 RNA pseudouridylate synthase HQK30_14235 PF01966 HD domain HQK30_14235 PF11871 Domain of unknown function (DUF3391) HQK30_14245 PF00923 Transaldolase/Fructose-6-phosphate aldolase HQK30_14250 PF04055 Radical SAM superfamily HQK30_14255 PF02901 Pyruvate formate lyase-like HQK30_14255 PF01228 Glycine radical HQK30_14260 PF08220 DeoR-like helix-turn-helix domain HQK30_14260 PF00455 DeoR C terminal sensor domain HQK30_14265 PF00892 EamA-like transporter family HQK30_14270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQK30_14295 PF00313 'Cold-shock' DNA-binding domain HQK30_14300 PF00364 Biotin-requiring enzyme HQK30_14300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HQK30_14300 PF02817 e3 binding domain HQK30_14305 PF02780 Transketolase, C-terminal domain HQK30_14305 PF02779 Transketolase, pyrimidine binding domain HQK30_14310 PF00676 Dehydrogenase E1 component HQK30_14315 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HQK30_14325 PF05472 DNA replication terminus site-binding protein (Ter protein) HQK30_14330 PF00176 SNF2 family N-terminal domain HQK30_14330 PF04434 SWIM zinc finger HQK30_14330 PF00271 Helicase conserved C-terminal domain HQK30_14335 PF04337 Protein of unknown function, DUF480 HQK30_14350 PF00953 Glycosyl transferase family 4 HQK30_14355 PF00534 Glycosyl transferases group 1 HQK30_14355 PF13439 Glycosyltransferase Family 4 HQK30_14385 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HQK30_14395 PF05523 WxcM-like, C-terminal HQK30_14400 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HQK30_14405 PF00483 Nucleotidyl transferase HQK30_14410 PF04321 RmlD substrate binding domain HQK30_14415 PF16363 GDP-mannose 4,6 dehydratase HQK30_14420 PF02321 Outer membrane efflux protein HQK30_14425 PF00873 AcrB/AcrD/AcrF family HQK30_14430 PF00529 HlyD membrane-fusion protein of T1SS HQK30_14430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HQK30_14435 PF00440 Bacterial regulatory proteins, tetR family HQK30_14435 PF08361 MAATS-type transcriptional repressor, C-terminal region HQK30_14455 PF00849 RNA pseudouridylate synthase HQK30_14455 PF01479 S4 domain HQK30_14460 PF04079 Segregation and condensation complex subunit ScpB HQK30_14465 PF02616 Segregation and condensation protein ScpA HQK30_14470 PF01300 Telomere recombination HQK30_14475 PF02811 PHP domain HQK30_14480 PF04715 Anthranilate synthase component I, N terminal region HQK30_14480 PF00425 chorismate binding enzyme HQK30_14485 PF00591 Glycosyl transferase family, a/b domain HQK30_14485 PF00117 Glutamine amidotransferase class-I HQK30_14485 PF02885 Glycosyl transferase family, helical bundle domain HQK30_14490 PF02885 Glycosyl transferase family, helical bundle domain HQK30_14490 PF00591 Glycosyl transferase family, a/b domain HQK30_14495 PF00218 Indole-3-glycerol phosphate synthase HQK30_14495 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HQK30_14500 PF00291 Pyridoxal-phosphate dependent enzyme HQK30_14505 PF00290 Tryptophan synthase alpha chain HQK30_14540 PF04307 LexA-binding, inner membrane-associated putative hydrolase HQK30_14545 PF01381 Helix-turn-helix HQK30_14550 PF13657 HipA N-terminal domain HQK30_14550 PF07804 HipA-like C-terminal domain HQK30_14570 PF01773 Na+ dependent nucleoside transporter N-terminus HQK30_14570 PF07662 Na+ dependent nucleoside transporter C-terminus HQK30_14570 PF07670 Nucleoside recognition HQK30_14580 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HQK30_14585 PF00005 ABC transporter HQK30_14590 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_14595 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HQK30_14605 PF07690 Major Facilitator Superfamily HQK30_14610 PF01040 UbiA prenyltransferase family HQK30_14615 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HQK30_14620 PF00510 Cytochrome c oxidase subunit III HQK30_14625 PF00115 Cytochrome C and Quinol oxidase polypeptide I HQK30_14630 PF06481 COX Aromatic Rich Motif HQK30_14630 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HQK30_14640 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HQK30_14640 PF00034 Cytochrome c HQK30_14650 PF01156 Inosine-uridine preferring nucleoside hydrolase HQK30_14670 PF00127 Copper binding proteins, plastocyanin/azurin family HQK30_14675 PF02424 ApbE family HQK30_14680 PF07690 Major Facilitator Superfamily HQK30_14685 PF00011 Hsp20/alpha crystallin family HQK30_14700 PF03372 Endonuclease/Exonuclease/phosphatase family HQK30_14705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HQK30_14710 PF00873 AcrB/AcrD/AcrF family HQK30_14715 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HQK30_14725 PF00529 HlyD membrane-fusion protein of T1SS HQK30_14725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HQK30_14730 PF00873 AcrB/AcrD/AcrF family HQK30_14750 PF10437 Bacterial lipoate protein ligase C-terminus HQK30_14750 PF03099 Biotin/lipoate A/B protein ligase family HQK30_14755 PF03707 Bacterial signalling protein N terminal repeat HQK30_14755 PF00990 Diguanylate cyclase, GGDEF domain HQK30_14755 PF00563 EAL domain HQK30_14760 PF00873 AcrB/AcrD/AcrF family HQK30_14775 PF04143 Sulphur transport HQK30_14780 PF01022 Bacterial regulatory protein, arsR family HQK30_14795 PF02308 MgtC family HQK30_14800 PF00356 Bacterial regulatory proteins, lacI family HQK30_14800 PF13407 Periplasmic binding protein domain HQK30_14805 PF00251 Glycosyl hydrolases family 32 N-terminal domain HQK30_14805 PF08244 Glycosyl hydrolases family 32 C terminal HQK30_14810 PF00367 phosphotransferase system, EIIB HQK30_14810 PF02378 Phosphotransferase system, EIIC HQK30_14815 PF00294 pfkB family carbohydrate kinase HQK30_14820 PF02264 LamB porin HQK30_14820 PF11471 Maltoporin periplasmic N-terminal extension HQK30_14825 PF00684 DnaJ central domain HQK30_14825 PF00226 DnaJ domain HQK30_14825 PF01556 DnaJ C terminal domain HQK30_14830 PF00012 Hsp70 protein HQK30_14835 PF01025 GrpE HQK30_14840 PF01513 ATP-NAD kinase HQK30_14845 PF02463 RecF/RecN/SMC N terminal domain HQK30_14850 PF02833 DHHA2 domain HQK30_14850 PF01368 DHH family HQK30_14860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HQK30_14865 PF00005 ABC transporter HQK30_14865 PF02687 FtsX-like permease family HQK30_14865 PF12704 MacB-like periplasmic core domain HQK30_14870 PF02321 Outer membrane efflux protein HQK30_14875 PF08021 Siderophore-interacting FAD-binding domain HQK30_14875 PF04954 Siderophore-interacting protein HQK30_14880 PF00793 DAHP synthetase I family HQK30_14885 PF00816 H-NS histone family HQK30_14900 PF01266 FAD dependent oxidoreductase HQK30_14905 PF01381 Helix-turn-helix HQK30_14905 PF07883 Cupin domain HQK30_14910 PF00171 Aldehyde dehydrogenase family HQK30_14915 PF00202 Aminotransferase class-III HQK30_14920 PF00324 Amino acid permease HQK30_14930 PF13520 Amino acid permease HQK30_14940 PF02690 Na+/Pi-cotransporter HQK30_14945 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HQK30_14945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HQK30_14950 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HQK30_14955 PF01627 Hpt domain HQK30_14955 PF00512 His Kinase A (phospho-acceptor) domain HQK30_14955 PF00072 Response regulator receiver domain HQK30_14955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_14955 PF00672 HAMP domain HQK30_14955 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HQK30_14960 PF00563 EAL domain HQK30_14960 PF01590 GAF domain HQK30_14960 PF00990 Diguanylate cyclase, GGDEF domain HQK30_14960 PF00360 Phytochrome region HQK30_14965 PF01627 Hpt domain HQK30_14965 PF00512 His Kinase A (phospho-acceptor) domain HQK30_14965 PF00989 PAS fold HQK30_14965 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQK30_14965 PF00072 Response regulator receiver domain HQK30_14965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_14980 PF12848 ABC transporter HQK30_14980 PF00005 ABC transporter HQK30_14995 PF13474 SnoaL-like domain HQK30_15000 PF14821 Threonine synthase N terminus HQK30_15000 PF00291 Pyridoxal-phosphate dependent enzyme HQK30_15005 PF00288 GHMP kinases N terminal domain HQK30_15005 PF08544 GHMP kinases C terminal HQK30_15010 PF03447 Homoserine dehydrogenase, NAD binding domain HQK30_15010 PF01842 ACT domain HQK30_15010 PF13840 ACT domain HQK30_15010 PF00742 Homoserine dehydrogenase HQK30_15010 PF00696 Amino acid kinase family HQK30_15015 PF00588 SpoU rRNA Methylase family HQK30_15020 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) HQK30_15035 PF03737 Aldolase/RraA HQK30_15045 PF00486 Transcriptional regulatory protein, C terminal HQK30_15045 PF00072 Response regulator receiver domain HQK30_15060 PF00664 ABC transporter transmembrane region HQK30_15060 PF00005 ABC transporter HQK30_15065 PF00005 ABC transporter HQK30_15065 PF00664 ABC transporter transmembrane region HQK30_15085 PF01980 tRNA-methyltransferase O HQK30_15085 PF18389 TrmO C-terminal domain HQK30_15090 PF01966 HD domain HQK30_15090 PF00672 HAMP domain HQK30_15095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HQK30_15095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HQK30_15105 PF07724 AAA domain (Cdc48 subfamily) HQK30_15105 PF17871 AAA lid domain HQK30_15105 PF02861 Clp amino terminal domain, pathogenicity island component HQK30_15105 PF00004 ATPase family associated with various cellular activities (AAA) HQK30_15105 PF10431 C-terminal, D2-small domain, of ClpB protein HQK30_15110 PF00291 Pyridoxal-phosphate dependent enzyme HQK30_15115 PF00381 PTS HPr component phosphorylation site HQK30_15120 PF05524 PEP-utilising enzyme, N-terminal HQK30_15120 PF00391 PEP-utilising enzyme, mobile domain HQK30_15120 PF02896 PEP-utilising enzyme, TIM barrel domain HQK30_15125 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HQK30_15130 PF00072 Response regulator receiver domain HQK30_15130 PF00990 Diguanylate cyclase, GGDEF domain HQK30_15135 PF01292 Prokaryotic cytochrome b561 HQK30_15145 PF12320 Type 5 capsule protein repressor C-terminal domain HQK30_15145 PF00149 Calcineurin-like phosphoesterase HQK30_15155 PF04381 Putative exonuclease, RdgC HQK30_15165 PF00999 Sodium/hydrogen exchanger family HQK30_15165 PF02254 TrkA-N domain HQK30_15170 PF04151 Bacterial pre-peptidase C-terminal domain HQK30_15170 PF04389 Peptidase family M28 HQK30_15180 PF02887 Pyruvate kinase, alpha/beta domain HQK30_15180 PF00224 Pyruvate kinase, barrel domain HQK30_15185 PF00924 Mechanosensitive ion channel HQK30_15185 PF12794 Mechanosensitive ion channel inner membrane domain 1 HQK30_15185 PF12795 Mechanosensitive ion channel porin domain HQK30_15195 PF10282 Lactonase, 7-bladed beta-propeller HQK30_15205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_15205 PF00672 HAMP domain HQK30_15210 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQK30_15215 PF00860 Permease family HQK30_15230 PF00390 Malic enzyme, N-terminal domain HQK30_15230 PF03949 Malic enzyme, NAD binding domain HQK30_15240 PF13247 4Fe-4S dicluster domain HQK30_15245 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HQK30_15245 PF12838 4Fe-4S dicluster domain HQK30_15245 PF12838 4Fe-4S dicluster domain HQK30_15245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HQK30_15245 PF01568 Molydopterin dinucleotide binding domain HQK30_15245 PF00384 Molybdopterin oxidoreductase HQK30_15245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HQK30_15245 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HQK30_15245 PF01568 Molydopterin dinucleotide binding domain HQK30_15245 PF00384 Molybdopterin oxidoreductase HQK30_15280 PF02634 FdhD/NarQ family HQK30_15285 PF12728 Helix-turn-helix domain HQK30_15285 PF12727 PBP superfamily domain HQK30_15290 PF00512 His Kinase A (phospho-acceptor) domain HQK30_15290 PF00989 PAS fold HQK30_15290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_15295 PF00158 Sigma-54 interaction domain HQK30_15295 PF02954 Bacterial regulatory protein, Fis family HQK30_15295 PF00072 Response regulator receiver domain HQK30_15300 PF12849 PBP superfamily domain HQK30_15305 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_15310 PF00005 ABC transporter HQK30_15315 PF12804 MobA-like NTP transferase domain HQK30_15320 PF03453 MoeA N-terminal region (domain I and II) HQK30_15320 PF03454 MoeA C-terminal region (domain IV) HQK30_15320 PF00994 Probable molybdopterin binding domain HQK30_15325 PF04632 Fusaric acid resistance protein family HQK30_15340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_15340 PF13426 PAS domain HQK30_15340 PF08447 PAS fold HQK30_15360 PF05114 Protein of unknown function (DUF692) HQK30_15380 PF10725 Protein of unknown function (DUF2517) HQK30_15400 PF00072 Response regulator receiver domain HQK30_15400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_15400 PF09308 LuxQ, periplasmic HQK30_15400 PF00512 His Kinase A (phospho-acceptor) domain HQK30_15405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQK30_15410 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_15415 PF12911 N-terminal TM domain of oligopeptide transport permease C HQK30_15415 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_15420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQK30_15420 PF00005 ABC transporter HQK30_15425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQK30_15425 PF00005 ABC transporter HQK30_15435 PF01869 BadF/BadG/BcrA/BcrD ATPase family HQK30_15440 PF02838 Glycosyl hydrolase family 20, domain 2 HQK30_15440 PF00728 Glycosyl hydrolase family 20, catalytic domain HQK30_15445 PF08447 PAS fold HQK30_15445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_15460 PF01131 DNA topoisomerase HQK30_15460 PF01751 Toprim domain HQK30_15460 PF01396 Topoisomerase DNA binding C4 zinc finger HQK30_15460 PF08272 Topoisomerase I zinc-ribbon-like HQK30_15465 PF04996 Succinylarginine dihydrolase HQK30_15470 PF08496 Peptidase family S49 N-terminal HQK30_15470 PF01343 Peptidase family S49 HQK30_15475 PF00106 short chain dehydrogenase HQK30_15480 PF03466 LysR substrate binding domain HQK30_15480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_15485 PF07690 Major Facilitator Superfamily HQK30_15490 PF00155 Aminotransferase class I and II HQK30_15500 PF03466 LysR substrate binding domain HQK30_15500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_15510 PF01161 Phosphatidylethanolamine-binding protein HQK30_15520 PF01204 Trehalase HQK30_15525 PF00579 tRNA synthetases class I (W and Y) HQK30_15530 PF01551 Peptidase family M23 HQK30_15530 PF08525 Opacity-associated protein A N-terminal motif HQK30_15530 PF01476 LysM domain HQK30_15535 PF03702 Anhydro-N-acetylmuramic acid kinase HQK30_15540 PF01042 Endoribonuclease L-PSP HQK30_15550 PF00456 Transketolase, thiamine diphosphate binding domain HQK30_15550 PF02780 Transketolase, C-terminal domain HQK30_15550 PF02779 Transketolase, pyrimidine binding domain HQK30_15555 PF00438 S-adenosylmethionine synthetase, N-terminal domain HQK30_15555 PF02772 S-adenosylmethionine synthetase, central domain HQK30_15555 PF02773 S-adenosylmethionine synthetase, C-terminal domain HQK30_15560 PF10263 SprT-like family HQK30_15565 PF04231 Endonuclease I HQK30_15570 PF04452 RNA methyltransferase HQK30_15575 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HQK30_15575 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HQK30_15580 PF12729 Four helix bundle sensory module for signal transduction HQK30_15580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_15580 PF00672 HAMP domain HQK30_15585 PF02622 Uncharacterized ACR, COG1678 HQK30_15590 PF03652 Holliday junction resolvase HQK30_15595 PF00854 POT family HQK30_15600 PF00144 Beta-lactamase HQK30_15605 PF17863 AAA lid domain HQK30_15605 PF07726 ATPase family associated with various cellular activities (AAA) HQK30_15615 PF11992 Domain of unknown function (DUF3488) HQK30_15615 PF13559 Domain of unknown function (DUF4129) HQK30_15615 PF01841 Transglutaminase-like superfamily HQK30_15620 PF01235 Sodium:alanine symporter family HQK30_15625 PF00923 Transaldolase/Fructose-6-phosphate aldolase HQK30_15640 PF03167 Uracil DNA glycosylase superfamily HQK30_15645 PF01228 Glycine radical HQK30_15650 PF00375 Sodium:dicarboxylate symporter family HQK30_15655 PF00793 DAHP synthetase I family HQK30_15660 PF13369 Transglutaminase-like superfamily HQK30_15670 PF17827 PrmC N-terminal domain HQK30_15670 PF13847 Methyltransferase domain HQK30_15675 PF00472 RF-1 domain HQK30_15675 PF03462 PCRF domain HQK30_15680 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HQK30_15680 PF01488 Shikimate / quinate 5-dehydrogenase HQK30_15680 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HQK30_15685 PF03550 Outer membrane lipoprotein LolB HQK30_15690 PF08544 GHMP kinases C terminal HQK30_15690 PF00288 GHMP kinases N terminal domain HQK30_15700 PF14572 Phosphoribosyl synthetase-associated domain HQK30_15700 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HQK30_15705 PF02872 5'-nucleotidase, C-terminal domain HQK30_15705 PF00149 Calcineurin-like phosphoesterase HQK30_15710 PF01195 Peptidyl-tRNA hydrolase HQK30_15715 PF01926 50S ribosome-binding GTPase HQK30_15715 PF06071 Protein of unknown function (DUF933) HQK30_15760 PF03600 Citrate transporter HQK30_15760 PF02080 TrkA-C domain HQK30_15765 PF04973 Nicotinamide mononucleotide transporter HQK30_15770 PF01048 Phosphorylase superfamily HQK30_15800 PF00005 ABC transporter HQK30_15800 PF12848 ABC transporter HQK30_15810 PF00155 Aminotransferase class I and II HQK30_15810 PF00392 Bacterial regulatory proteins, gntR family HQK30_15830 PF10371 Domain of unknown function HQK30_15830 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HQK30_15830 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HQK30_15830 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HQK30_15830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQK30_15835 PF07690 Major Facilitator Superfamily HQK30_15840 PF13419 Haloacid dehalogenase-like hydrolase HQK30_15850 PF00171 Aldehyde dehydrogenase family HQK30_15855 PF04958 Arginine N-succinyltransferase beta subunit HQK30_15860 PF00202 Aminotransferase class-III HQK30_15865 PF00117 Glutamine amidotransferase class-I HQK30_15875 PF00579 tRNA synthetases class I (W and Y) HQK30_15880 PF13419 Haloacid dehalogenase-like hydrolase HQK30_15885 PF00834 Ribulose-phosphate 3 epimerase family HQK30_15890 PF02086 D12 class N6 adenine-specific DNA methyltransferase HQK30_15900 PF01761 3-dehydroquinate synthase HQK30_15905 PF01202 Shikimate kinase HQK30_15910 PF07660 Secretin and TonB N terminus short domain HQK30_15910 PF03958 Bacterial type II/III secretion system short domain HQK30_15910 PF00263 Bacterial type II and III secretion system protein HQK30_15910 PF11741 AMIN domain HQK30_15935 PF17092 Penicillin-binding protein OB-like domain HQK30_15935 PF00912 Transglycosylase HQK30_15935 PF00905 Penicillin binding protein transpeptidase domain HQK30_15940 PF03466 LysR substrate binding domain HQK30_15940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_15945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_15945 PF00672 HAMP domain HQK30_15945 PF16591 Helical bimodular sensor domain HQK30_15960 PF03466 LysR substrate binding domain HQK30_15960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_15975 PF08525 Opacity-associated protein A N-terminal motif HQK30_15975 PF01551 Peptidase family M23 HQK30_15975 PF01476 LysM domain HQK30_15985 PF00924 Mechanosensitive ion channel HQK30_15985 PF12794 Mechanosensitive ion channel inner membrane domain 1 HQK30_15985 PF12795 Mechanosensitive ion channel porin domain HQK30_15990 PF03009 Glycerophosphoryl diester phosphodiesterase family HQK30_15995 PF00672 HAMP domain HQK30_15995 PF02743 Cache domain HQK30_15995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_16000 PF00890 FAD binding domain HQK30_16000 PF02910 Fumarate reductase flavoprotein C-term HQK30_16005 PF13183 4Fe-4S dicluster domain HQK30_16005 PF13085 2Fe-2S iron-sulfur cluster binding domain HQK30_16010 PF02300 Fumarate reductase subunit C HQK30_16015 PF02313 Fumarate reductase subunit D HQK30_16035 PF06224 Winged helix DNA-binding domain HQK30_16050 PF00501 AMP-binding enzyme HQK30_16070 PF00072 Response regulator receiver domain HQK30_16070 PF00486 Transcriptional regulatory protein, C terminal HQK30_16075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_16075 PF00512 His Kinase A (phospho-acceptor) domain HQK30_16075 PF08521 Two-component sensor kinase N-terminal HQK30_16085 PF00478 IMP dehydrogenase / GMP reductase domain HQK30_16095 PF01132 Elongation factor P (EF-P) OB domain HQK30_16095 PF09285 Elongation factor P, C-terminal HQK30_16095 PF08207 Elongation factor P (EF-P) KOW-like domain HQK30_16100 PF09997 Predicted membrane protein (DUF2238) HQK30_16110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HQK30_16110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HQK30_16120 PF00990 Diguanylate cyclase, GGDEF domain HQK30_16120 PF07694 5TMR of 5TMR-LYT HQK30_16130 PF13419 Haloacid dehalogenase-like hydrolase HQK30_16140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_16140 PF03466 LysR substrate binding domain HQK30_16145 PF05230 MASE2 domain HQK30_16145 PF00990 Diguanylate cyclase, GGDEF domain HQK30_16155 PF00857 Isochorismatase family HQK30_16160 PF01494 FAD binding domain HQK30_16165 PF00919 Uncharacterized protein family UPF0004 HQK30_16165 PF01938 TRAM domain HQK30_16165 PF04055 Radical SAM superfamily HQK30_16170 PF02562 PhoH-like protein HQK30_16175 PF02130 Uncharacterized protein family UPF0054 HQK30_16180 PF03471 Transporter associated domain HQK30_16180 PF00571 CBS domain HQK30_16185 PF00795 Carbon-nitrogen hydrolase HQK30_16190 PF07295 Zinc-ribbon containing domain HQK30_16195 PF13603 Leucyl-tRNA synthetase, Domain 2 HQK30_16195 PF08264 Anticodon-binding domain of tRNA HQK30_16195 PF00133 tRNA synthetases class I (I, L, M and V) HQK30_16210 PF01467 Cytidylyltransferase-like HQK30_16220 PF02590 Predicted SPOUT methyltransferase HQK30_16225 PF00905 Penicillin binding protein transpeptidase domain HQK30_16225 PF03717 Penicillin-binding Protein dimerisation domain HQK30_16230 PF01098 Cell cycle protein HQK30_16235 PF13406 Transglycosylase SLT domain HQK30_16240 PF05036 Sporulation related domain HQK30_16240 PF03330 Lytic transglycolase HQK30_16245 PF07943 Penicillin-binding protein 5, C-terminal domain HQK30_16245 PF00768 D-alanyl-D-alanine carboxypeptidase HQK30_16250 PF04359 Protein of unknown function (DUF493) HQK30_16255 PF03099 Biotin/lipoate A/B protein ligase family HQK30_16260 PF04055 Radical SAM superfamily HQK30_16260 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HQK30_16265 PF06821 Serine hydrolase HQK30_16270 PF02508 Rnf-Nqr subunit, membrane protein HQK30_16285 PF13411 MerR HTH family regulatory protein HQK30_16290 PF01368 DHH family HQK30_16290 PF17768 RecJ OB domain HQK30_16290 PF02272 DHHA1 domain HQK30_16300 PF01741 Large-conductance mechanosensitive channel, MscL HQK30_16305 PF00990 Diguanylate cyclase, GGDEF domain HQK30_16310 PF00589 Phage integrase family HQK30_16310 PF02899 Phage integrase, N-terminal SAM-like domain HQK30_16315 PF00258 Flavodoxin HQK30_16320 PF01523 Putative modulator of DNA gyrase HQK30_16325 PF01523 Putative modulator of DNA gyrase HQK30_16335 PF03734 L,D-transpeptidase catalytic domain HQK30_16335 PF17969 L,D-transpeptidase C-terminal domain HQK30_16340 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase HQK30_16345 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HQK30_16365 PF01568 Molydopterin dinucleotide binding domain HQK30_16365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HQK30_16365 PF00384 Molybdopterin oxidoreductase HQK30_16370 PF03916 Polysulphide reductase, NrfD HQK30_16375 PF13247 4Fe-4S dicluster domain HQK30_16380 PF00989 PAS fold HQK30_16380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_16380 PF00512 His Kinase A (phospho-acceptor) domain HQK30_16385 PF00072 Response regulator receiver domain HQK30_16385 PF00196 Bacterial regulatory proteins, luxR family HQK30_16390 PF03575 Peptidase family S51 HQK30_16395 PF10415 Fumarase C C-terminus HQK30_16395 PF00206 Lyase HQK30_16405 PF02635 DsrE/DsrF-like family HQK30_16410 PF00990 Diguanylate cyclase, GGDEF domain HQK30_16415 PF07690 Major Facilitator Superfamily HQK30_16420 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HQK30_16420 PF00013 KH domain HQK30_16420 PF03725 3' exoribonuclease family, domain 2 HQK30_16420 PF01138 3' exoribonuclease family, domain 1 HQK30_16420 PF00575 S1 RNA binding domain HQK30_16425 PF00312 Ribosomal protein S15 HQK30_16430 PF01509 TruB family pseudouridylate synthase (N terminal domain) HQK30_16430 PF16198 tRNA pseudouridylate synthase B C-terminal domain HQK30_16430 PF09157 Pseudouridine synthase II TruB, C-terminal HQK30_16435 PF02033 Ribosome-binding factor A HQK30_16440 PF08364 Bacterial translation initiation factor IF-2 associated region HQK30_16440 PF11987 Translation-initiation factor 2 HQK30_16440 PF00009 Elongation factor Tu GTP binding domain HQK30_16440 PF04760 Translation initiation factor IF-2, N-terminal region HQK30_16445 PF13184 NusA-like KH domain HQK30_16445 PF00575 S1 RNA binding domain HQK30_16445 PF08529 NusA N-terminal domain HQK30_16450 PF17384 RimP C-terminal SH3 domain HQK30_16450 PF02576 RimP N-terminal domain HQK30_16465 PF03840 Preprotein translocase SecG subunit HQK30_16470 PF00121 Triosephosphate isomerase HQK30_16475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HQK30_16475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HQK30_16475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HQK30_16475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HQK30_16480 PF00809 Pterin binding enzyme HQK30_16485 PF01434 Peptidase family M41 HQK30_16485 PF00004 ATPase family associated with various cellular activities (AAA) HQK30_16485 PF17862 AAA+ lid domain HQK30_16485 PF06480 FtsH Extracellular HQK30_16490 PF01728 FtsJ-like methyltransferase HQK30_16495 PF01985 CRS1 / YhbY (CRM) domain HQK30_16505 PF03449 Transcription elongation factor, N-terminal HQK30_16505 PF01272 Transcription elongation factor, GreA/GreB, C-term HQK30_16510 PF00691 OmpA family HQK30_16510 PF13677 Membrane MotB of proton-channel complex MotA/MotB HQK30_16515 PF01618 MotA/TolQ/ExbB proton channel family HQK30_16520 PF02609 Exonuclease VII small subunit HQK30_16525 PF00348 Polyprenyl synthetase HQK30_16530 PF02780 Transketolase, C-terminal domain HQK30_16530 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HQK30_16530 PF02779 Transketolase, pyrimidine binding domain HQK30_16545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQK30_16550 PF00005 ABC transporter HQK30_16550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQK30_16555 PF04608 Phosphatidylglycerophosphatase A HQK30_16560 PF02769 AIR synthase related protein, C-terminal domain HQK30_16560 PF00586 AIR synthase related protein, N-terminal domain HQK30_16565 PF01029 NusB family HQK30_16570 PF00885 6,7-dimethyl-8-ribityllumazine synthase HQK30_16575 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HQK30_16575 PF00925 GTP cyclohydrolase II HQK30_16580 PF00677 Lumazine binding domain HQK30_16585 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HQK30_16585 PF01872 RibD C-terminal domain HQK30_16590 PF03477 ATP cone domain HQK30_16605 PF00464 Serine hydroxymethyltransferase HQK30_16615 PF00672 HAMP domain HQK30_16615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_16615 PF00512 His Kinase A (phospho-acceptor) domain HQK30_16615 PF01627 Hpt domain HQK30_16615 PF00072 Response regulator receiver domain HQK30_16620 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HQK30_16630 PF00155 Aminotransferase class I and II HQK30_16630 PF00392 Bacterial regulatory proteins, gntR family HQK30_16635 PF00578 AhpC/TSA family HQK30_16640 PF00085 Thioredoxin HQK30_16640 PF11412 Disulphide bond corrector protein DsbC HQK30_16640 PF02683 Cytochrome C biogenesis protein transmembrane region HQK30_16645 PF00486 Transcriptional regulatory protein, C terminal HQK30_16645 PF00072 Response regulator receiver domain HQK30_16650 PF03264 NapC/NirT cytochrome c family, N-terminal region HQK30_16655 PF01568 Molydopterin dinucleotide binding domain HQK30_16655 PF18364 Molybdopterin oxidoreductase N-terminal domain HQK30_16655 PF00384 Molybdopterin oxidoreductase HQK30_16660 PF02613 Nitrate reductase delta subunit HQK30_16680 PF00990 Diguanylate cyclase, GGDEF domain HQK30_16680 PF13188 PAS domain HQK30_16680 PF03707 Bacterial signalling protein N terminal repeat HQK30_16680 PF00563 EAL domain HQK30_16690 PF13193 AMP-binding enzyme C-terminal domain HQK30_16690 PF00501 AMP-binding enzyme HQK30_16690 PF16177 Acetyl-coenzyme A synthetase N-terminus HQK30_16695 PF01220 Dehydroquinase class II HQK30_16700 PF00364 Biotin-requiring enzyme HQK30_16705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HQK30_16705 PF02785 Biotin carboxylase C-terminal domain HQK30_16705 PF00289 Biotin carboxylase, N-terminal domain HQK30_16710 PF06196 Protein of unknown function (DUF997) HQK30_16715 PF00474 Sodium:solute symporter family HQK30_16720 PF00367 phosphotransferase system, EIIB HQK30_16720 PF02378 Phosphotransferase system, EIIC HQK30_16720 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HQK30_16725 PF03466 LysR substrate binding domain HQK30_16725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_16730 PF08240 Alcohol dehydrogenase GroES-like domain HQK30_16730 PF00107 Zinc-binding dehydrogenase HQK30_16740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HQK30_16740 PF01842 ACT domain HQK30_16740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HQK30_16750 PF00881 Nitroreductase family HQK30_16755 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQK30_16755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HQK30_16760 PF01343 Peptidase family S49 HQK30_16775 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HQK30_16775 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HQK30_16780 PF07023 Protein of unknown function (DUF1315) HQK30_16785 PF00710 Asparaginase, N-terminal HQK30_16785 PF17763 Glutaminase/Asparaginase C-terminal domain HQK30_16790 PF03616 Sodium/glutamate symporter HQK30_16795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_16795 PF00672 HAMP domain HQK30_16795 PF02743 Cache domain HQK30_16805 PF00152 tRNA synthetases class II (D, K and N) HQK30_16805 PF01336 OB-fold nucleic acid binding domain HQK30_16810 PF02567 Phenazine biosynthesis-like protein HQK30_16815 PF00175 Oxidoreductase NAD-binding domain HQK30_16815 PF00258 Flavodoxin HQK30_16815 PF00667 FAD binding domain HQK30_16820 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HQK30_16820 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HQK30_16825 PF01507 Phosphoadenosine phosphosulfate reductase family HQK30_16830 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HQK30_16835 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_16840 PF00571 CBS domain HQK30_16840 PF00005 ABC transporter HQK30_16845 PF00186 Dihydrofolate reductase HQK30_16850 PF12821 Threonine/Serine exporter, ThrE HQK30_16855 PF06738 Putative threonine/serine exporter HQK30_16865 PF00994 Probable molybdopterin binding domain HQK30_16875 PF02801 Beta-ketoacyl synthase, C-terminal domain HQK30_16875 PF00109 Beta-ketoacyl synthase, N-terminal domain HQK30_16890 PF02801 Beta-ketoacyl synthase, C-terminal domain HQK30_16890 PF00109 Beta-ketoacyl synthase, N-terminal domain HQK30_16915 PF00221 Aromatic amino acid lyase HQK30_16925 PF07977 FabA-like domain HQK30_16930 PF13193 AMP-binding enzyme C-terminal domain HQK30_16930 PF00501 AMP-binding enzyme HQK30_16940 PF00550 Phosphopantetheine attachment site HQK30_16945 PF00550 Phosphopantetheine attachment site HQK30_16980 PF00034 Cytochrome c HQK30_16980 PF03150 Di-haem cytochrome c peroxidase HQK30_16985 PF00194 Eukaryotic-type carbonic anhydrase HQK30_16990 PF04227 Indigoidine synthase A like protein HQK30_16995 PF00294 pfkB family carbohydrate kinase HQK30_17010 PF00582 Universal stress protein family HQK30_17020 PF00171 Aldehyde dehydrogenase family HQK30_17025 PF01472 PUA domain HQK30_17025 PF00696 Amino acid kinase family HQK30_17030 PF07417 Sigma factor-binding transcriptional regulator Crl HQK30_17040 PF00156 Phosphoribosyl transferase domain HQK30_17045 PF07687 Peptidase dimerisation domain HQK30_17045 PF01546 Peptidase family M20/M25/M40 HQK30_17050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQK30_17050 PF00005 ABC transporter HQK30_17055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQK30_17055 PF00005 ABC transporter HQK30_17065 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_17065 PF12911 N-terminal TM domain of oligopeptide transport permease C HQK30_17070 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_17075 PF00593 TonB dependent receptor HQK30_17075 PF07715 TonB-dependent Receptor Plug Domain HQK30_17085 PF01618 MotA/TolQ/ExbB proton channel family HQK30_17090 PF01618 MotA/TolQ/ExbB proton channel family HQK30_17095 PF02472 Biopolymer transport protein ExbD/TolR HQK30_17110 PF00704 Glycosyl hydrolases family 18 HQK30_17110 PF06483 Chitinase C HQK30_17145 PF00749 tRNA synthetases class I (E and Q), catalytic domain HQK30_17150 PF00672 HAMP domain HQK30_17150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_17160 PF00313 'Cold-shock' DNA-binding domain HQK30_17200 PF00929 Exonuclease HQK30_17205 PF03193 RsgA GTPase HQK30_17210 PF02666 Phosphatidylserine decarboxylase HQK30_17215 PF09905 DNA-binding protein VF530 HQK30_17235 PF03707 Bacterial signalling protein N terminal repeat HQK30_17235 PF00990 Diguanylate cyclase, GGDEF domain HQK30_17235 PF00563 EAL domain HQK30_17240 PF06877 Regulator of ribonuclease activity B HQK30_17245 PF00801 PKD domain HQK30_17245 PF05547 Immune inhibitor A peptidase M6 HQK30_17260 PF00561 alpha/beta hydrolase fold HQK30_17265 PF00005 ABC transporter HQK30_17265 PF00664 ABC transporter transmembrane region HQK30_17270 PF06004 Bacterial protein of unknown function (DUF903) HQK30_17275 PF00082 Subtilase family HQK30_17275 PF05922 Peptidase inhibitor I9 HQK30_17280 PF00581 Rhodanese-like domain HQK30_17285 PF04960 Glutaminase HQK30_17290 PF04320 Protein with unknown function (DUF469) HQK30_17295 PF02390 Putative methyltransferase HQK30_17300 PF01483 Proprotein convertase P-domain HQK30_17300 PF04389 Peptidase family M28 HQK30_17305 PF00155 Aminotransferase class I and II HQK30_17310 PF00563 EAL domain HQK30_17310 PF12792 CSS motif domain associated with EAL HQK30_17315 PF01370 NAD dependent epimerase/dehydratase family HQK30_17315 PF08338 Domain of unknown function (DUF1731) HQK30_17325 PF00005 ABC transporter HQK30_17330 PF13472 GDSL-like Lipase/Acylhydrolase family HQK30_17335 PF01584 CheW-like domain HQK30_17335 PF00072 Response regulator receiver domain HQK30_17360 PF06826 Predicted Permease Membrane Region HQK30_17360 PF02080 TrkA-C domain HQK30_17365 PF03006 Haemolysin-III related HQK30_17370 PF00282 Pyridoxal-dependent decarboxylase conserved domain HQK30_17375 PF04279 Intracellular septation protein A HQK30_17380 PF03795 YCII-related domain HQK30_17385 PF00459 Inositol monophosphatase family HQK30_17395 PF00483 Nucleotidyl transferase HQK30_17400 PF00854 POT family HQK30_17405 PF00072 Response regulator receiver domain HQK30_17435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HQK30_17440 PF02321 Outer membrane efflux protein HQK30_17445 PF01207 Dihydrouridine synthase (Dus) HQK30_17450 PF02954 Bacterial regulatory protein, Fis family HQK30_17480 PF01521 Iron-sulphur cluster biosynthesis HQK30_17490 PF00654 Voltage gated chloride channel HQK30_17495 PF00202 Aminotransferase class-III HQK30_17510 PF01569 PAP2 superfamily HQK30_17520 PF11849 Domain of unknown function (DUF3369) HQK30_17530 PF00893 Small Multidrug Resistance protein HQK30_17535 PF00893 Small Multidrug Resistance protein HQK30_17540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQK30_17545 PF14814 Bifunctional transglycosylase second domain HQK30_17545 PF00905 Penicillin binding protein transpeptidase domain HQK30_17545 PF00912 Transglycosylase HQK30_17550 PF08482 ATP-dependent helicase C-terminal HQK30_17550 PF04408 Helicase associated domain (HA2) HQK30_17550 PF00270 DEAD/DEAH box helicase HQK30_17550 PF00271 Helicase conserved C-terminal domain HQK30_17560 PF17746 SfsA N-terminal OB domain HQK30_17560 PF03749 Sugar fermentation stimulation protein RE domain HQK30_17565 PF01258 Prokaryotic dksA/traR C4-type zinc finger HQK30_17570 PF00749 tRNA synthetases class I (E and Q), catalytic domain HQK30_17575 PF01743 Poly A polymerase head domain HQK30_17575 PF12627 Probable RNA and SrmB- binding site of polymerase A HQK30_17575 PF12626 Polymerase A arginine-rich C-terminus HQK30_17580 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HQK30_17585 PF02548 Ketopantoate hydroxymethyltransferase HQK30_17590 PF02569 Pantoate-beta-alanine ligase HQK30_17610 PF01869 BadF/BadG/BcrA/BcrD ATPase family HQK30_17615 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component HQK30_17620 PF01061 ABC-2 type transporter HQK30_17625 PF00005 ABC transporter HQK30_17630 PF00156 Phosphoribosyl transferase domain HQK30_17635 PF00440 Bacterial regulatory proteins, tetR family HQK30_17640 PF02441 Flavoprotein HQK30_17645 PF02875 Mur ligase family, glutamate ligase domain HQK30_17645 PF08245 Mur ligase middle domain HQK30_17645 PF01225 Mur ligase family, catalytic domain HQK30_17650 PF00719 Inorganic pyrophosphatase HQK30_17665 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HQK30_17680 PF00005 ABC transporter HQK30_17700 PF08447 PAS fold HQK30_17700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_17720 PF03600 Citrate transporter HQK30_17720 PF02080 TrkA-C domain HQK30_17725 PF00009 Elongation factor Tu GTP binding domain HQK30_17730 PF01507 Phosphoadenosine phosphosulfate reductase family HQK30_17735 PF14824 Sirohaem biosynthesis protein central HQK30_17735 PF10414 Sirohaem synthase dimerisation region HQK30_17735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HQK30_17740 PF16200 C-terminal region of band_7 HQK30_17740 PF01145 SPFH domain / Band 7 family HQK30_17745 PF01957 NfeD-like C-terminal, partner-binding HQK30_17750 PF00571 CBS domain HQK30_17750 PF01380 SIS domain HQK30_17755 PF12848 ABC transporter HQK30_17755 PF00005 ABC transporter HQK30_17765 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HQK30_17805 PF00474 Sodium:solute symporter family HQK30_17810 PF17969 L,D-transpeptidase C-terminal domain HQK30_17810 PF03734 L,D-transpeptidase catalytic domain HQK30_17815 PF00924 Mechanosensitive ion channel HQK30_17820 PF00871 Acetokinase family HQK30_17825 PF04074 YhcH/YjgK/YiaL HQK30_17835 PF07732 Multicopper oxidase HQK30_17835 PF00394 Multicopper oxidase HQK30_17835 PF07731 Multicopper oxidase HQK30_17840 PF01177 Asp/Glu/Hydantoin racemase HQK30_17845 PF01810 LysE type translocator HQK30_17855 PF00392 Bacterial regulatory proteins, gntR family HQK30_17855 PF00155 Aminotransferase class I and II HQK30_17880 PF00209 Sodium:neurotransmitter symporter family HQK30_17890 PF00209 Sodium:neurotransmitter symporter family HQK30_17910 PF07690 Major Facilitator Superfamily HQK30_17920 PF01037 Lrp/AsnC ligand binding domain HQK30_17935 PF01047 MarR family HQK30_17940 PF00107 Zinc-binding dehydrogenase HQK30_17940 PF16884 N-terminal domain of oxidoreductase HQK30_17945 PF00293 NUDIX domain HQK30_17955 PF01641 SelR domain HQK30_17960 PF00128 Alpha amylase, catalytic domain HQK30_17960 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HQK30_17965 PF02806 Alpha amylase, C-terminal all-beta domain HQK30_17965 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HQK30_17965 PF00128 Alpha amylase, catalytic domain HQK30_17970 PF02446 4-alpha-glucanotransferase HQK30_17975 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HQK30_17975 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HQK30_17980 PF01263 Aldose 1-epimerase HQK30_17985 PF02445 Quinolinate synthetase A protein HQK30_17990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_17990 PF00672 HAMP domain HQK30_18065 PF16331 TolA binding protein trimerisation HQK30_18065 PF13174 Tetratricopeptide repeat HQK30_18070 PF00691 OmpA family HQK30_18075 PF07676 WD40-like Beta Propeller Repeat HQK30_18075 PF04052 TolB amino-terminal domain HQK30_18085 PF02472 Biopolymer transport protein ExbD/TolR HQK30_18090 PF01618 MotA/TolQ/ExbB proton channel family HQK30_18095 PF03061 Thioesterase superfamily HQK30_18100 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) HQK30_18105 PF08173 Membrane bound YbgT-like protein HQK30_18110 PF02322 Cytochrome bd terminal oxidase subunit II HQK30_18115 PF01654 Cytochrome bd terminal oxidase subunit I HQK30_18120 PF05496 Holliday junction DNA helicase RuvB P-loop domain HQK30_18120 PF17864 RuvB AAA lid domain HQK30_18120 PF05491 RuvB C-terminal winged helix domain HQK30_18125 PF01330 RuvA N terminal domain HQK30_18125 PF07499 RuvA, C-terminal domain HQK30_18130 PF00672 HAMP domain HQK30_18130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_18135 PF03129 Anticodon binding domain HQK30_18135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HQK30_18135 PF04073 Aminoacyl-tRNA editing domain HQK30_18140 PF00106 short chain dehydrogenase HQK30_18155 PF00378 Enoyl-CoA hydratase/isomerase HQK30_18160 PF10952 Protein of unknown function (DUF2753) HQK30_18165 PF00132 Bacterial transferase hexapeptide (six repeats) HQK30_18175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQK30_18190 PF02594 Uncharacterised ACR, YggU family COG1872 HQK30_18195 PF02325 YGGT family HQK30_18200 PF14748 Pyrroline-5-carboxylate reductase dimerisation HQK30_18200 PF03807 NADP oxidoreductase coenzyme F420-dependent HQK30_18205 PF01168 Alanine racemase, N-terminal domain HQK30_18210 PF00437 Type II/IV secretion system protein HQK30_18215 PF00437 Type II/IV secretion system protein HQK30_18220 PF03883 Peroxide stress protein YaaA HQK30_18225 PF00271 Helicase conserved C-terminal domain HQK30_18225 PF00270 DEAD/DEAH box helicase HQK30_18230 PF05175 Methyltransferase small domain HQK30_18235 PF05525 Branched-chain amino acid transport protein HQK30_18240 PF05525 Branched-chain amino acid transport protein HQK30_18255 PF01475 Ferric uptake regulator family HQK30_18260 PF01207 Dihydrouridine synthase (Dus) HQK30_18275 PF00216 Bacterial DNA-binding protein HQK30_18280 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ HQK30_18285 PF07238 PilZ domain HQK30_18290 PF18073 Rubredoxin metal binding domain HQK30_18305 PF18429 Domain of unknown function (DUF5609) HQK30_18315 PF08447 PAS fold HQK30_18315 PF08448 PAS fold HQK30_18315 PF13426 PAS domain HQK30_18315 PF00563 EAL domain HQK30_18315 PF00990 Diguanylate cyclase, GGDEF domain HQK30_18315 PF05231 MASE1 HQK30_18320 PF01048 Phosphorylase superfamily HQK30_18325 PF01676 Metalloenzyme superfamily HQK30_18330 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HQK30_18330 PF00591 Glycosyl transferase family, a/b domain HQK30_18330 PF02885 Glycosyl transferase family, helical bundle domain HQK30_18335 PF01791 DeoC/LacD family aldolase HQK30_18345 PF07670 Nucleoside recognition HQK30_18345 PF07662 Na+ dependent nucleoside transporter C-terminus HQK30_18345 PF01773 Na+ dependent nucleoside transporter N-terminus HQK30_18350 PF01026 TatD related DNase HQK30_18355 PF07963 Prokaryotic N-terminal methylation motif HQK30_18355 PF00114 Pilin (bacterial filament) HQK30_18365 PF00583 Acetyltransferase (GNAT) family HQK30_18370 PF05958 tRNA (Uracil-5-)-methyltransferase HQK30_18370 PF01938 TRAM domain HQK30_18375 PF00909 Ammonium Transporter Family HQK30_18385 PF01757 Acyltransferase family HQK30_18405 PF03739 Lipopolysaccharide export system permease LptF/LptG HQK30_18410 PF03739 Lipopolysaccharide export system permease LptF/LptG HQK30_18415 PF00883 Cytosol aminopeptidase family, catalytic domain HQK30_18415 PF02789 Cytosol aminopeptidase family, N-terminal domain HQK30_18420 PF04364 DNA polymerase III chi subunit, HolC HQK30_18425 PF10458 Valyl tRNA synthetase tRNA binding arm HQK30_18425 PF08264 Anticodon-binding domain of tRNA HQK30_18425 PF00133 tRNA synthetases class I (I, L, M and V) HQK30_18430 PF00571 CBS domain HQK30_18430 PF03471 Transporter associated domain HQK30_18430 PF01595 Cyclin M transmembrane N-terminal domain HQK30_18435 PF09335 SNARE associated Golgi protein HQK30_18440 PF00768 D-alanyl-D-alanine carboxypeptidase HQK30_18475 PF02599 Global regulator protein family HQK30_18480 PF13840 ACT domain HQK30_18480 PF01842 ACT domain HQK30_18480 PF00696 Amino acid kinase family HQK30_18485 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HQK30_18485 PF02272 DHHA1 domain HQK30_18485 PF01411 tRNA synthetases class II (A) HQK30_18490 PF02631 RecX family HQK30_18495 PF00154 recA bacterial DNA recombination protein HQK30_18500 PF02464 Competence-damaged protein HQK30_18505 PF00488 MutS domain V HQK30_18505 PF05190 MutS family domain IV HQK30_18505 PF05192 MutS domain III HQK30_18505 PF05188 MutS domain II HQK30_18505 PF01624 MutS domain I HQK30_18510 PF02028 BCCT, betaine/carnitine/choline family transporter HQK30_18525 PF04222 Protein of unknown function (DUF416) HQK30_18530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HQK30_18535 PF08525 Opacity-associated protein A N-terminal motif HQK30_18535 PF01551 Peptidase family M23 HQK30_18535 PF01476 LysM domain HQK30_18555 PF01297 Zinc-uptake complex component A periplasmic HQK30_18560 PF00005 ABC transporter HQK30_18565 PF00950 ABC 3 transport family HQK30_18570 PF03466 LysR substrate binding domain HQK30_18570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_18575 PF00892 EamA-like transporter family HQK30_18580 PF03167 Uracil DNA glycosylase superfamily HQK30_18585 PF00892 EamA-like transporter family HQK30_18595 PF01541 GIY-YIG catalytic domain HQK30_18610 PF04012 PspA/IM30 family HQK30_18615 PF01553 Acyltransferase HQK30_18635 PF00578 AhpC/TSA family HQK30_18645 PF00684 DnaJ central domain HQK30_18645 PF01556 DnaJ C terminal domain HQK30_18645 PF00226 DnaJ domain HQK30_18700 PF02600 Disulfide bond formation protein DsbB HQK30_18705 PF07690 Major Facilitator Superfamily HQK30_18710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_18710 PF03466 LysR substrate binding domain HQK30_18720 PF00521 DNA gyrase/topoisomerase IV, subunit A HQK30_18720 PF03989 DNA gyrase C-terminal domain, beta-propeller HQK30_18725 PF00204 DNA gyrase B HQK30_18725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_18725 PF01751 Toprim domain HQK30_18725 PF00986 DNA gyrase B subunit, carboxyl terminus HQK30_18730 PF04632 Fusaric acid resistance protein family HQK30_18735 PF00529 HlyD membrane-fusion protein of T1SS HQK30_18735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HQK30_18740 PF07869 Protein of unknown function (DUF1656) HQK30_18750 PF00293 NUDIX domain HQK30_18755 PF05728 Uncharacterised protein family (UPF0227) HQK30_18760 PF00149 Calcineurin-like phosphoesterase HQK30_18765 PF06853 Protein of unknown function (DUF1249) HQK30_18770 PF00293 NUDIX domain HQK30_18775 PF02321 Outer membrane efflux protein HQK30_18780 PF01467 Cytidylyltransferase-like HQK30_18780 PF00294 pfkB family carbohydrate kinase HQK30_18785 PF03279 Bacterial lipid A biosynthesis acyltransferase HQK30_18800 PF01865 Protein of unknown function DUF47 HQK30_18805 PF01384 Phosphate transporter family HQK30_18810 PF04073 Aminoacyl-tRNA editing domain HQK30_18830 PF00155 Aminotransferase class I and II HQK30_18830 PF00392 Bacterial regulatory proteins, gntR family HQK30_18840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_18840 PF03466 LysR substrate binding domain HQK30_18845 PF03788 LrgA family HQK30_18850 PF04172 LrgB-like family HQK30_18865 PF01743 Poly A polymerase head domain HQK30_18865 PF01966 HD domain HQK30_18865 PF12627 Probable RNA and SrmB- binding site of polymerase A HQK30_18870 PF13401 AAA domain HQK30_18870 PF01471 Putative peptidoglycan binding domain HQK30_18875 PF16537 Type II secretion system protein B HQK30_18880 PF00633 Helix-hairpin-helix motif HQK30_18880 PF00730 HhH-GPD superfamily base excision DNA repair protein HQK30_18880 PF14815 NUDIX domain HQK30_18880 PF10576 Iron-sulfur binding domain of endonuclease III HQK30_18885 PF04362 Bacterial Fe(2+) trafficking HQK30_18890 PF01464 Transglycosylase SLT domain HQK30_18890 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HQK30_18895 PF04076 Bacterial OB fold (BOF) protein HQK30_18900 PF00657 GDSL-like Lipase/Acylhydrolase HQK30_18910 PF01389 OmpA-like transmembrane domain HQK30_18910 PF00691 OmpA family HQK30_18915 PF03886 ABC-type transport auxiliary lipoprotein component HQK30_18920 PF02470 MlaD protein HQK30_18925 PF04403 Paraquat-inducible protein A HQK30_18930 PF17209 Hfq protein HQK30_18935 PF13419 Haloacid dehalogenase-like hydrolase HQK30_18945 PF01590 GAF domain HQK30_18945 PF00360 Phytochrome region HQK30_18945 PF00563 EAL domain HQK30_18945 PF00990 Diguanylate cyclase, GGDEF domain HQK30_18950 PF00701 Dihydrodipicolinate synthetase family HQK30_18955 PF05175 Methyltransferase small domain HQK30_18955 PF08468 Methyltransferase small domain N-terminal HQK30_18960 PF00483 Nucleotidyl transferase HQK30_18965 PF08323 Starch synthase catalytic domain HQK30_18965 PF00534 Glycosyl transferases group 1 HQK30_19000 PF03553 Na+/H+ antiporter family HQK30_19005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_19005 PF03466 LysR substrate binding domain HQK30_19010 PF13416 Bacterial extracellular solute-binding protein HQK30_19015 PF08402 TOBE domain HQK30_19015 PF00005 ABC transporter HQK30_19020 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_19025 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_19030 PF00171 Aldehyde dehydrogenase family HQK30_19055 PF12464 Maltose acetyltransferase HQK30_19055 PF14602 Hexapeptide repeat of succinyl-transferase HQK30_19060 PF11941 Domain of unknown function (DUF3459) HQK30_19060 PF00128 Alpha amylase, catalytic domain HQK30_19065 PF00367 phosphotransferase system, EIIB HQK30_19065 PF02378 Phosphotransferase system, EIIC HQK30_19070 PF00356 Bacterial regulatory proteins, lacI family HQK30_19085 PF17763 Glutaminase/Asparaginase C-terminal domain HQK30_19085 PF00710 Asparaginase, N-terminal HQK30_19100 PF02142 MGS-like domain HQK30_19110 PF00210 Ferritin-like domain HQK30_19125 PF08351 Domain of unknown function (DUF1726) HQK30_19125 PF13718 GNAT acetyltransferase 2 HQK30_19125 PF05127 Helicase HQK30_19125 PF17176 tRNA-binding domain HQK30_19130 PF00106 short chain dehydrogenase HQK30_19135 PF01584 CheW-like domain HQK30_19135 PF00072 Response regulator receiver domain HQK30_19180 PF02660 Glycerol-3-phosphate acyltransferase HQK30_19185 PF02152 Dihydroneopterin aldolase HQK30_19190 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HQK30_19200 PF07690 Major Facilitator Superfamily HQK30_19205 PF07683 Cobalamin synthesis protein cobW C-terminal domain HQK30_19205 PF02492 CobW/HypB/UreG, nucleotide-binding domain HQK30_19210 PF04030 D-arabinono-1,4-lactone oxidase HQK30_19210 PF01565 FAD binding domain HQK30_19215 PF01810 LysE type translocator HQK30_19220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_19220 PF03466 LysR substrate binding domain HQK30_19225 PF12792 CSS motif domain associated with EAL HQK30_19225 PF00563 EAL domain HQK30_19230 PF06434 Aconitate hydratase 2 N-terminus HQK30_19230 PF11791 Aconitate B N-terminal domain HQK30_19230 PF00330 Aconitase family (aconitate hydratase) HQK30_19235 PF01734 Patatin-like phospholipase HQK30_19240 PF00672 HAMP domain HQK30_19240 PF12729 Four helix bundle sensory module for signal transduction HQK30_19240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_19245 PF00672 HAMP domain HQK30_19245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_19245 PF12729 Four helix bundle sensory module for signal transduction HQK30_19255 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQK30_19255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQK30_19260 PF02817 e3 binding domain HQK30_19260 PF00364 Biotin-requiring enzyme HQK30_19260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HQK30_19265 PF17831 Pyruvate dehydrogenase E1 component middle domain HQK30_19265 PF00456 Transketolase, thiamine diphosphate binding domain HQK30_19270 PF00392 Bacterial regulatory proteins, gntR family HQK30_19270 PF07729 FCD domain HQK30_19275 PF01510 N-acetylmuramoyl-L-alanine amidase HQK30_19285 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HQK30_19285 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HQK30_19290 PF07963 Prokaryotic N-terminal methylation motif HQK30_19295 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HQK30_19295 PF00437 Type II/IV secretion system protein HQK30_19300 PF00482 Type II secretion system (T2SS), protein F HQK30_19305 PF01478 Type IV leader peptidase family HQK30_19305 PF06750 Bacterial Peptidase A24 N-terminal domain HQK30_19310 PF01121 Dephospho-CoA kinase HQK30_19315 PF07072 Cell division protein HQK30_19320 PF03884 DNA gyrase inhibitor YacG HQK30_19325 PF00293 NUDIX domain HQK30_19335 PF02810 SEC-C motif HQK30_19335 PF07517 SecA DEAD-like domain HQK30_19335 PF01043 SecA preprotein cross-linking domain HQK30_19335 PF07516 SecA Wing and Scaffold domain HQK30_19345 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HQK30_19350 PF12327 FtsZ family, C-terminal domain HQK30_19350 PF00091 Tubulin/FtsZ family, GTPase domain HQK30_19355 PF02491 SHS2 domain inserted in FTSA HQK30_19360 PF03799 Cell division protein FtsQ HQK30_19360 PF08478 POTRA domain, FtsQ-type HQK30_19365 PF08245 Mur ligase middle domain HQK30_19365 PF02875 Mur ligase family, glutamate ligase domain HQK30_19365 PF01225 Mur ligase family, catalytic domain HQK30_19370 PF04101 Glycosyltransferase family 28 C-terminal domain HQK30_19370 PF03033 Glycosyltransferase family 28 N-terminal domain HQK30_19375 PF01098 Cell cycle protein HQK30_19380 PF08245 Mur ligase middle domain HQK30_19380 PF02875 Mur ligase family, glutamate ligase domain HQK30_19390 PF01225 Mur ligase family, catalytic domain HQK30_19390 PF02875 Mur ligase family, glutamate ligase domain HQK30_19390 PF08245 Mur ligase middle domain HQK30_19395 PF08245 Mur ligase middle domain HQK30_19395 PF01225 Mur ligase family, catalytic domain HQK30_19395 PF02875 Mur ligase family, glutamate ligase domain HQK30_19400 PF00905 Penicillin binding protein transpeptidase domain HQK30_19400 PF03717 Penicillin-binding Protein dimerisation domain HQK30_19405 PF04999 Cell division protein FtsL HQK30_19410 PF01795 MraW methylase family HQK30_19415 PF02381 MraZ protein, putative antitoxin-like HQK30_19425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HQK30_19430 PF04348 LppC putative lipoprotein HQK30_19435 PF02021 Uncharacterised protein family UPF0102 HQK30_19440 PF13580 SIS domain HQK30_19445 PF04972 BON domain HQK30_19450 PF04386 Stringent starvation protein B HQK30_19455 PF00043 Glutathione S-transferase, C-terminal domain HQK30_19455 PF02798 Glutathione S-transferase, N-terminal domain HQK30_19460 PF02167 Cytochrome C1 family HQK30_19465 PF00033 Cytochrome b/b6/petB HQK30_19465 PF00032 Cytochrome b(C-terminal)/b6/petD HQK30_19470 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HQK30_19470 PF00355 Rieske [2Fe-2S] domain HQK30_19475 PF00380 Ribosomal protein S9/S16 HQK30_19480 PF00572 Ribosomal protein L13 HQK30_19485 PF03969 AFG1-like ATPase HQK30_19495 PF00595 PDZ domain HQK30_19495 PF13180 PDZ domain HQK30_19500 PF13180 PDZ domain HQK30_19530 PF01979 Amidohydrolase family HQK30_19535 PF03841 L-seryl-tRNA selenium transferase HQK30_19540 PF07071 KDGP aldolase HQK30_19545 PF08279 HTH domain HQK30_19545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HQK30_19545 PF00874 PRD domain HQK30_19545 PF05043 Mga helix-turn-helix domain HQK30_19550 PF00381 PTS HPr component phosphorylation site HQK30_19555 PF03668 P-loop ATPase protein family HQK30_19560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HQK30_19565 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HQK30_19570 PF04963 Sigma-54 factor, core binding domain HQK30_19570 PF04552 Sigma-54, DNA binding domain HQK30_19570 PF00309 Sigma-54 factor, Activator interacting domain (AID) HQK30_19575 PF00005 ABC transporter HQK30_19575 PF12399 Branched-chain amino acid ATP-binding cassette transporter HQK30_19580 PF03968 OstA-like protein HQK30_19585 PF06835 Lipopolysaccharide-assembly, LptC-related HQK30_19595 PF00571 CBS domain HQK30_19595 PF01380 SIS domain HQK30_19600 PF00005 ABC transporter HQK30_19605 PF02405 Permease MlaE HQK30_19610 PF02470 MlaD protein HQK30_19615 PF05494 MlaC protein HQK30_19625 PF01722 BolA-like protein HQK30_19630 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HQK30_19635 PF01523 Putative modulator of DNA gyrase HQK30_19640 PF04751 Protein of unknown function (DUF615) HQK30_19650 PF04363 Protein of unknown function (DUF496) HQK30_19680 PF01381 Helix-turn-helix HQK30_19680 PF07883 Cupin domain HQK30_19685 PF03594 Benzoate membrane transport protein HQK30_19695 PF02219 Methylenetetrahydrofolate reductase HQK30_19710 PF00672 HAMP domain HQK30_19710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_19715 PF03922 OmpW family HQK30_19720 PF07694 5TMR of 5TMR-LYT HQK30_19720 PF00990 Diguanylate cyclase, GGDEF domain HQK30_19725 PF00005 ABC transporter HQK30_19725 PF17755 UvrA DNA-binding domain HQK30_19725 PF17760 UvrA interaction domain HQK30_19730 PF00196 Bacterial regulatory proteins, luxR family HQK30_19735 PF00436 Single-strand binding protein family HQK30_19745 PF16916 Dimerisation domain of Zinc Transporter HQK30_19745 PF01545 Cation efflux family HQK30_19755 PF00313 'Cold-shock' DNA-binding domain HQK30_19760 PF00593 TonB dependent receptor HQK30_19760 PF07715 TonB-dependent Receptor Plug Domain HQK30_19765 PF01590 GAF domain HQK30_19765 PF00990 Diguanylate cyclase, GGDEF domain HQK30_19765 PF00563 EAL domain HQK30_19765 PF00360 Phytochrome region HQK30_19770 PF00512 His Kinase A (phospho-acceptor) domain HQK30_19770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_19770 PF00672 HAMP domain HQK30_19775 PF00072 Response regulator receiver domain HQK30_19775 PF00486 Transcriptional regulatory protein, C terminal HQK30_19800 PF00990 Diguanylate cyclase, GGDEF domain HQK30_19800 PF00072 Response regulator receiver domain HQK30_19810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQK30_19820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_19820 PF03466 LysR substrate binding domain HQK30_19830 PF13538 UvrD-like helicase C-terminal domain HQK30_19835 PF00580 UvrD/REP helicase N-terminal domain HQK30_19835 PF12705 PD-(D/E)XK nuclease superfamily HQK30_19835 PF13361 UvrD-like helicase C-terminal domain HQK30_19840 PF17946 RecC C-terminal domain HQK30_19845 PF07681 DoxX HQK30_19850 PF17954 Quercetinase C-terminal cupin domain HQK30_19850 PF02678 Pirin HQK30_19860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_19860 PF03466 LysR substrate binding domain HQK30_19870 PF00392 Bacterial regulatory proteins, gntR family HQK30_19870 PF07702 UTRA domain HQK30_19885 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_19895 PF08402 TOBE domain HQK30_19895 PF00005 ABC transporter HQK30_19905 PF00990 Diguanylate cyclase, GGDEF domain HQK30_19925 PF00583 Acetyltransferase (GNAT) family HQK30_19950 PF01569 PAP2 superfamily HQK30_19955 PF01594 AI-2E family transporter HQK30_19960 PF00106 short chain dehydrogenase HQK30_19965 PF04371 Porphyromonas-type peptidyl-arginine deiminase HQK30_19970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_19970 PF03466 LysR substrate binding domain HQK30_19975 PF00158 Sigma-54 interaction domain HQK30_19975 PF02954 Bacterial regulatory protein, Fis family HQK30_19975 PF00989 PAS fold HQK30_19980 PF00465 Iron-containing alcohol dehydrogenase HQK30_19985 PF00391 PEP-utilising enzyme, mobile domain HQK30_19985 PF05524 PEP-utilising enzyme, N-terminal HQK30_19985 PF00381 PTS HPr component phosphorylation site HQK30_19985 PF03610 PTS system fructose IIA component HQK30_19990 PF02734 DAK2 domain HQK30_19995 PF02733 Dak1 domain HQK30_20000 PF00860 Permease family HQK30_20040 PF00009 Elongation factor Tu GTP binding domain HQK30_20040 PF03144 Elongation factor Tu domain 2 HQK30_20040 PF03143 Elongation factor Tu C-terminal domain HQK30_20045 PF00679 Elongation factor G C-terminus HQK30_20045 PF03144 Elongation factor Tu domain 2 HQK30_20045 PF00009 Elongation factor Tu GTP binding domain HQK30_20045 PF03764 Elongation factor G, domain IV HQK30_20045 PF14492 Elongation Factor G, domain II HQK30_20050 PF00177 Ribosomal protein S7p/S5e HQK30_20055 PF00164 Ribosomal protein S12/S23 HQK30_20060 PF04077 DsrH like protein HQK30_20065 PF02635 DsrE/DsrF-like family HQK30_20070 PF02635 DsrE/DsrF-like family HQK30_20075 PF01042 Endoribonuclease L-PSP HQK30_20080 PF08348 YheO-like PAS domain HQK30_20080 PF13309 HTH domain HQK30_20085 PF04983 RNA polymerase Rpb1, domain 3 HQK30_20085 PF04998 RNA polymerase Rpb1, domain 5 HQK30_20085 PF04997 RNA polymerase Rpb1, domain 1 HQK30_20085 PF05000 RNA polymerase Rpb1, domain 4 HQK30_20085 PF00623 RNA polymerase Rpb1, domain 2 HQK30_20090 PF04565 RNA polymerase Rpb2, domain 3 HQK30_20090 PF10385 RNA polymerase beta subunit external 1 domain HQK30_20090 PF00562 RNA polymerase Rpb2, domain 6 HQK30_20090 PF04560 RNA polymerase Rpb2, domain 7 HQK30_20090 PF04561 RNA polymerase Rpb2, domain 2 HQK30_20090 PF04563 RNA polymerase beta subunit HQK30_20095 PF16320 Ribosomal protein L7/L12 dimerisation domain HQK30_20095 PF00542 Ribosomal protein L7/L12 C-terminal domain HQK30_20100 PF00466 Ribosomal protein L10 HQK30_20105 PF00687 Ribosomal protein L1p/L10e family HQK30_20110 PF00298 Ribosomal protein L11, RNA binding domain HQK30_20110 PF03946 Ribosomal protein L11, N-terminal domain HQK30_20115 PF02357 Transcription termination factor nusG HQK30_20115 PF00467 KOW motif HQK30_20120 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HQK30_20130 PF03144 Elongation factor Tu domain 2 HQK30_20130 PF03143 Elongation factor Tu C-terminal domain HQK30_20130 PF00009 Elongation factor Tu GTP binding domain HQK30_20145 PF00485 Phosphoribulokinase / Uridine kinase family HQK30_20150 PF08279 HTH domain HQK30_20150 PF03099 Biotin/lipoate A/B protein ligase family HQK30_20150 PF02237 Biotin protein ligase C terminal domain HQK30_20155 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HQK30_20155 PF01565 FAD binding domain HQK30_20160 PF02080 TrkA-C domain HQK30_20160 PF02254 TrkA-N domain HQK30_20165 PF02386 Cation transport protein HQK30_20170 PF12852 Cupin HQK30_20170 PF12833 Helix-turn-helix domain HQK30_20185 PF01131 DNA topoisomerase HQK30_20185 PF01751 Toprim domain HQK30_20190 PF03264 NapC/NirT cytochrome c family, N-terminal region HQK30_20195 PF01568 Molydopterin dinucleotide binding domain HQK30_20195 PF00384 Molybdopterin oxidoreductase HQK30_20195 PF18364 Molybdopterin oxidoreductase N-terminal domain HQK30_20205 PF08918 PhoQ Sensor HQK30_20205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_20210 PF00072 Response regulator receiver domain HQK30_20210 PF00486 Transcriptional regulatory protein, C terminal HQK30_20225 PF01794 Ferric reductase like transmembrane component HQK30_20230 PF00174 Oxidoreductase molybdopterin binding domain HQK30_20235 PF06496 Protein of unknown function (DUF1097) HQK30_20240 PF00072 Response regulator receiver domain HQK30_20240 PF00158 Sigma-54 interaction domain HQK30_20250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_20250 PF00512 His Kinase A (phospho-acceptor) domain HQK30_20270 PF02272 DHHA1 domain HQK30_20270 PF01743 Poly A polymerase head domain HQK30_20270 PF12627 Probable RNA and SrmB- binding site of polymerase A HQK30_20270 PF00571 CBS domain HQK30_20270 PF01368 DHH family HQK30_20275 PF10063 Uncharacterized integral membrane protein (DUF2301) HQK30_20285 PF01037 Lrp/AsnC ligand binding domain HQK30_20290 PF03590 Aspartate-ammonia ligase HQK30_20300 PF07724 AAA domain (Cdc48 subfamily) HQK30_20300 PF00004 ATPase family associated with various cellular activities (AAA) HQK30_20300 PF10431 C-terminal, D2-small domain, of ClpB protein HQK30_20300 PF17871 AAA lid domain HQK30_20300 PF02861 Clp amino terminal domain, pathogenicity island component HQK30_20310 PF00849 RNA pseudouridylate synthase HQK30_20310 PF01479 S4 domain HQK30_20315 PF13525 Outer membrane lipoprotein HQK30_20320 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQK30_20320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQK30_20325 PF00375 Sodium:dicarboxylate symporter family HQK30_20330 PF03313 Serine dehydratase alpha chain HQK30_20340 PF02233 NAD(P) transhydrogenase beta subunit HQK30_20345 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HQK30_20345 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HQK30_20345 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HQK30_20350 PF00465 Iron-containing alcohol dehydrogenase HQK30_20355 PF12833 Helix-turn-helix domain HQK30_20355 PF06719 AraC-type transcriptional regulator N-terminus HQK30_20360 PF08212 Lipocalin-like domain HQK30_20365 PF02743 Cache domain HQK30_20365 PF00672 HAMP domain HQK30_20365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_20375 PF02666 Phosphatidylserine decarboxylase HQK30_20395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HQK30_20395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HQK30_20400 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HQK30_20400 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HQK30_20405 PF01316 Arginine repressor, DNA binding domain HQK30_20405 PF02863 Arginine repressor, C-terminal domain HQK30_20410 PF03606 C4-dicarboxylate anaerobic carrier HQK30_20415 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HQK30_20415 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HQK30_20420 PF00696 Amino acid kinase family HQK30_20445 PF02743 Cache domain HQK30_20445 PF00672 HAMP domain HQK30_20445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_20450 PF02653 Branched-chain amino acid transport system / permease component HQK30_20455 PF00005 ABC transporter HQK30_20460 PF13407 Periplasmic binding protein domain HQK30_20465 PF02837 Glycosyl hydrolases family 2, sugar binding domain HQK30_20465 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HQK30_20465 PF00703 Glycosyl hydrolases family 2 HQK30_20465 PF02929 Beta galactosidase small chain HQK30_20465 PF16353 Domain of unknown function(DUF4981) HQK30_20470 PF00356 Bacterial regulatory proteins, lacI family HQK30_20475 PF16363 GDP-mannose 4,6 dehydratase HQK30_20480 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HQK30_20480 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HQK30_20485 PF10509 Galactokinase galactose-binding signature HQK30_20485 PF00288 GHMP kinases N terminal domain HQK30_20485 PF08544 GHMP kinases C terminal HQK30_20490 PF01263 Aldose 1-epimerase HQK30_20495 PF00248 Aldo/keto reductase family HQK30_20500 PF02673 Bacitracin resistance protein BacA HQK30_20505 PF12973 ChrR Cupin-like domain HQK30_20510 PF04545 Sigma-70, region 4 HQK30_20510 PF04542 Sigma-70 region 2 HQK30_20520 PF05746 DALR anticodon binding domain HQK30_20520 PF03485 Arginyl tRNA synthetase N terminal domain HQK30_20520 PF00750 tRNA synthetases class I (R) HQK30_20530 PF00227 Proteasome subunit HQK30_20535 PF00004 ATPase family associated with various cellular activities (AAA) HQK30_20535 PF10431 C-terminal, D2-small domain, of ClpB protein HQK30_20535 PF07724 AAA domain (Cdc48 subfamily) HQK30_20540 PF07690 Major Facilitator Superfamily HQK30_20545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQK30_20545 PF03466 LysR substrate binding domain HQK30_20550 PF04324 BFD-like [2Fe-2S] binding domain HQK30_20550 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HQK30_20550 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HQK30_20550 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQK30_20550 PF18267 Rubredoxin NAD+ reductase C-terminal domain HQK30_20555 PF13806 Rieske-like [2Fe-2S] domain HQK30_20560 PF01226 Formate/nitrite transporter HQK30_20565 PF14824 Sirohaem biosynthesis protein central HQK30_20565 PF10414 Sirohaem synthase dimerisation region HQK30_20565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HQK30_20570 PF00571 CBS domain HQK30_20570 PF03448 MgtE intracellular N domain HQK30_20570 PF01769 Divalent cation transporter HQK30_20575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_20575 PF00672 HAMP domain HQK30_20580 PF03737 Aldolase/RraA HQK30_20585 PF02592 Putative vitamin uptake transporter HQK30_20595 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HQK30_20600 PF00034 Cytochrome c HQK30_20605 PF00270 DEAD/DEAH box helicase HQK30_20605 PF00271 Helicase conserved C-terminal domain HQK30_20605 PF09382 RQC domain HQK30_20605 PF00570 HRDC domain HQK30_20605 PF16124 RecQ zinc-binding HQK30_20610 PF03061 Thioesterase superfamily HQK30_20625 PF03475 3-alpha domain HQK30_20625 PF03473 MOSC domain HQK30_20630 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_20635 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_20640 PF00005 ABC transporter HQK30_20640 PF08402 TOBE domain HQK30_20645 PF13416 Bacterial extracellular solute-binding protein HQK30_20650 PF13416 Bacterial extracellular solute-binding protein HQK30_20655 PF00202 Aminotransferase class-III HQK30_20660 PF00120 Glutamine synthetase, catalytic domain HQK30_20665 PF01258 Prokaryotic dksA/traR C4-type zinc finger HQK30_20680 PF05981 CreA protein HQK30_20685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HQK30_20685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HQK30_20690 PF00012 Hsp70 protein HQK30_20695 PF03724 META domain HQK30_20705 PF02903 Alpha amylase, N-terminal ig-like domain HQK30_20705 PF00128 Alpha amylase, catalytic domain HQK30_20710 PF02719 Polysaccharide biosynthesis protein HQK30_20715 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HQK30_20725 PF01370 NAD dependent epimerase/dehydratase family HQK30_20735 PF00733 Asparagine synthase HQK30_20735 PF13537 Glutamine amidotransferase domain HQK30_20760 PF03275 UDP-galactopyranose mutase HQK30_20765 PF00535 Glycosyl transferase family 2 HQK30_20780 PF13193 AMP-binding enzyme C-terminal domain HQK30_20780 PF00501 AMP-binding enzyme HQK30_20800 PF02348 Cytidylyltransferase HQK30_20810 PF08666 SAF domain HQK30_20810 PF03102 NeuB family HQK30_20830 PF09940 Domain of unknown function (DUF2172) HQK30_20830 PF16254 Domain of unknown function (DUF4910) HQK30_20830 PF16221 winged helix-turn-helix HQK30_20865 PF05958 tRNA (Uracil-5-)-methyltransferase HQK30_20870 PF00486 Transcriptional regulatory protein, C terminal HQK30_20870 PF00072 Response regulator receiver domain HQK30_20875 PF00672 HAMP domain HQK30_20875 PF00512 His Kinase A (phospho-acceptor) domain HQK30_20875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_20885 PF03949 Malic enzyme, NAD binding domain HQK30_20885 PF00390 Malic enzyme, N-terminal domain HQK30_20890 PF11066 Protein of unknown function (DUF2867) HQK30_20890 PF13460 NAD(P)H-binding HQK30_20895 PF01197 Ribosomal protein L31 HQK30_20900 PF00270 DEAD/DEAH box helicase HQK30_20900 PF00271 Helicase conserved C-terminal domain HQK30_20900 PF17764 3′ DNA-binding domain (3′BD) HQK30_20900 PF18074 Primosomal protein N C-terminal domain HQK30_20900 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HQK30_20910 PF00440 Bacterial regulatory proteins, tetR family HQK30_20920 PF01389 OmpA-like transmembrane domain HQK30_20920 PF00691 OmpA family HQK30_20925 PF00585 C-terminal regulatory domain of Threonine dehydratase HQK30_20925 PF00291 Pyridoxal-phosphate dependent enzyme HQK30_20930 PF00920 Dehydratase family HQK30_20935 PF01063 Amino-transferase class IV HQK30_20945 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HQK30_20945 PF00205 Thiamine pyrophosphate enzyme, central domain HQK30_20945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQK30_20950 PF01078 Magnesium chelatase, subunit ChlI HQK30_20950 PF13335 Magnesium chelatase, subunit ChlI C-terminal HQK30_20955 PF01553 Acyltransferase HQK30_20960 PF01553 Acyltransferase HQK30_20965 PF04463 Protein of unknown function (DUF523) HQK30_20975 PF00857 Isochorismatase family HQK30_20980 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HQK30_20980 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HQK30_20990 PF00005 ABC transporter HQK30_20995 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_21000 PF01323 DSBA-like thioredoxin domain HQK30_21005 PF01636 Phosphotransferase enzyme family HQK30_21010 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HQK30_21010 PF12801 4Fe-4S binding domain HQK30_21010 PF13746 4Fe-4S dicluster domain HQK30_21015 PF06288 Protein of unknown function (DUF1040) HQK30_21020 PF00360 Phytochrome region HQK30_21020 PF00990 Diguanylate cyclase, GGDEF domain HQK30_21020 PF01590 GAF domain HQK30_21020 PF00563 EAL domain HQK30_21025 PF00376 MerR family regulatory protein HQK30_21025 PF09278 MerR, DNA binding HQK30_21030 PF00403 Heavy-metal-associated domain HQK30_21035 PF00156 Phosphoribosyl transferase domain HQK30_21040 PF03725 3' exoribonuclease family, domain 2 HQK30_21040 PF01138 3' exoribonuclease family, domain 1 HQK30_21045 PF03755 YicC-like family, N-terminal region HQK30_21045 PF08340 Domain of unknown function (DUF1732) HQK30_21050 PF00282 Pyridoxal-dependent decarboxylase conserved domain HQK30_21060 PF00501 AMP-binding enzyme HQK30_21060 PF13193 AMP-binding enzyme C-terminal domain HQK30_21060 PF00668 Condensation domain HQK30_21060 PF00550 Phosphopantetheine attachment site HQK30_21065 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) HQK30_21070 PF00975 Thioesterase domain HQK30_21070 PF00550 Phosphopantetheine attachment site HQK30_21070 PF00501 AMP-binding enzyme HQK30_21070 PF00668 Condensation domain HQK30_21070 PF13193 AMP-binding enzyme C-terminal domain HQK30_21080 PF04954 Siderophore-interacting protein HQK30_21080 PF08021 Siderophore-interacting FAD-binding domain HQK30_21080 PF00005 ABC transporter HQK30_21080 PF00664 ABC transporter transmembrane region HQK30_21085 PF00005 ABC transporter HQK30_21090 PF01032 FecCD transport family HQK30_21095 PF01032 FecCD transport family HQK30_21100 PF00005 ABC transporter HQK30_21105 PF01497 Periplasmic binding protein HQK30_21110 PF00593 TonB dependent receptor HQK30_21110 PF07715 TonB-dependent Receptor Plug Domain HQK30_21130 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) HQK30_21145 PF01370 NAD dependent epimerase/dehydratase family HQK30_21150 PF00440 Bacterial regulatory proteins, tetR family HQK30_21150 PF08360 QacR-like protein, C-terminal region HQK30_21155 PF00155 Aminotransferase class I and II HQK30_21160 PF08240 Alcohol dehydrogenase GroES-like domain HQK30_21160 PF00107 Zinc-binding dehydrogenase HQK30_21165 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HQK30_21170 PF00990 Diguanylate cyclase, GGDEF domain HQK30_21170 PF13188 PAS domain HQK30_21170 PF00563 EAL domain HQK30_21170 PF03707 Bacterial signalling protein N terminal repeat HQK30_21175 PF13361 UvrD-like helicase C-terminal domain HQK30_21175 PF00580 UvrD/REP helicase N-terminal domain HQK30_21180 PF00266 Aminotransferase class-V HQK30_21185 PF02657 Fe-S metabolism associated domain HQK30_21190 PF00899 ThiF family HQK30_21225 PF12724 Flavodoxin domain HQK30_21230 PF02386 Cation transport protein HQK30_21235 PF09186 Domain of unknown function (DUF1949) HQK30_21235 PF01205 Uncharacterized protein family UPF0029 HQK30_21240 PF00557 Metallopeptidase family M24 HQK30_21245 PF00501 AMP-binding enzyme HQK30_21245 PF13193 AMP-binding enzyme C-terminal domain HQK30_21250 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HQK30_21250 PF00378 Enoyl-CoA hydratase/isomerase HQK30_21250 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HQK30_21255 PF00108 Thiolase, N-terminal domain HQK30_21255 PF02803 Thiolase, C-terminal domain HQK30_21260 PF00072 Response regulator receiver domain HQK30_21260 PF00486 Transcriptional regulatory protein, C terminal HQK30_21265 PF00512 His Kinase A (phospho-acceptor) domain HQK30_21265 PF00672 HAMP domain HQK30_21265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_21270 PF01547 Bacterial extracellular solute-binding protein HQK30_21280 PF01206 Sulfurtransferase TusA HQK30_21285 PF01042 Endoribonuclease L-PSP HQK30_21295 PF00691 OmpA family HQK30_21295 PF13488 Glycine zipper HQK30_21300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQK30_21300 PF02743 Cache domain HQK30_21300 PF00672 HAMP domain HQK30_21305 PF03352 Methyladenine glycosylase HQK30_21310 PF02091 Glycyl-tRNA synthetase alpha subunit HQK30_21315 PF02092 Glycyl-tRNA synthetase beta subunit HQK30_21315 PF05746 DALR anticodon binding domain HQK30_21350 PF03222 Tryptophan/tyrosine permease family HQK30_21355 PF12801 4Fe-4S binding domain HQK30_21365 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQK30_21365 PF18113 Rubredoxin binding C-terminal domain HQK30_21370 PF00258 Flavodoxin HQK30_21370 PF00753 Metallo-beta-lactamase superfamily HQK30_21370 PF00301 Rubredoxin HQK30_21375 PF01590 GAF domain HQK30_21375 PF00158 Sigma-54 interaction domain HQK30_21380 PF00392 Bacterial regulatory proteins, gntR family HQK30_21380 PF07702 UTRA domain HQK30_21385 PF02378 Phosphotransferase system, EIIC HQK30_21385 PF00367 phosphotransferase system, EIIB HQK30_21390 PF02056 Family 4 glycosyl hydrolase HQK30_21390 PF11975 Family 4 glycosyl hydrolase C-terminal domain HQK30_21395 PF00356 Bacterial regulatory proteins, lacI family HQK30_21400 PF13458 Periplasmic binding protein HQK30_21405 PF02653 Branched-chain amino acid transport system / permease component HQK30_21410 PF02653 Branched-chain amino acid transport system / permease component HQK30_21410 PF11862 Domain of unknown function (DUF3382) HQK30_21415 PF12399 Branched-chain amino acid ATP-binding cassette transporter HQK30_21415 PF00005 ABC transporter HQK30_21420 PF00005 ABC transporter HQK30_21435 PF00581 Rhodanese-like domain HQK30_21440 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HQK30_21440 PF01694 Rhomboid family HQK30_21445 PF12262 Bacterial virulence factor lipase N-terminal HQK30_21450 PF04380 Membrane fusogenic activity HQK30_21455 PF00175 Oxidoreductase NAD-binding domain HQK30_21460 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HQK30_21470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HQK30_21470 PF07498 Rho termination factor, N-terminal domain HQK30_21470 PF07497 Rho termination factor, RNA-binding domain HQK30_21475 PF00085 Thioredoxin HQK30_21480 PF00271 Helicase conserved C-terminal domain HQK30_21480 PF00270 DEAD/DEAH box helicase HQK30_21485 PF02541 Ppx/GppA phosphatase family HQK30_21500 PF04445 Putative SAM-dependent methyltransferase HQK30_21505 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQK30_21510 PF03707 Bacterial signalling protein N terminal repeat HQK30_21510 PF00990 Diguanylate cyclase, GGDEF domain HQK30_21510 PF00563 EAL domain HQK30_21515 PF01432 Peptidase family M3 HQK30_21520 PF00490 Delta-aminolevulinic acid dehydratase HQK30_21525 PF01026 TatD related DNase HQK30_21530 PF00902 Sec-independent protein translocase protein (TatC) HQK30_21535 PF02416 mttA/Hcf106 family HQK30_21540 PF02416 mttA/Hcf106 family HQK30_21545 PF03109 ABC1 family HQK30_21550 PF02036 SCP-2 sterol transfer family HQK30_21555 PF01209 ubiE/COQ5 methyltransferase family HQK30_21560 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HQK30_21565 PF07969 Amidohydrolase family HQK30_21610 PF03544 Gram-negative bacterial TonB protein C-terminal HQK30_21615 PF02472 Biopolymer transport protein ExbD/TolR HQK30_21620 PF01618 MotA/TolQ/ExbB proton channel family HQK30_21625 PF01618 MotA/TolQ/ExbB proton channel family HQK30_21635 PF00196 Bacterial regulatory proteins, luxR family HQK30_21635 PF03472 Autoinducer binding domain HQK30_21640 PF01380 SIS domain HQK30_21645 PF00455 DeoR C terminal sensor domain HQK30_21645 PF08220 DeoR-like helix-turn-helix domain HQK30_21650 PF00486 Transcriptional regulatory protein, C terminal HQK30_21650 PF00072 Response regulator receiver domain HQK30_21655 PF00672 HAMP domain HQK30_21655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQK30_21655 PF00512 His Kinase A (phospho-acceptor) domain HQK30_21660 PF00905 Penicillin binding protein transpeptidase domain HQK30_21665 PF06123 Inner membrane protein CreD HQK30_21670 PF12804 MobA-like NTP transferase domain HQK30_21670 PF00132 Bacterial transferase hexapeptide (six repeats) HQK30_21670 PF14602 Hexapeptide repeat of succinyl-transferase HQK30_21675 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HQK30_21675 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HQK30_21680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HQK30_21680 PF02874 ATP synthase alpha/beta family, beta-barrel domain HQK30_21685 PF00231 ATP synthase HQK30_21690 PF02874 ATP synthase alpha/beta family, beta-barrel domain HQK30_21690 PF00306 ATP synthase alpha/beta chain, C terminal domain HQK30_21690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HQK30_21695 PF00213 ATP synthase delta (OSCP) subunit HQK30_21700 PF00430 ATP synthase B/B' CF(0) HQK30_21705 PF00137 ATP synthase subunit C HQK30_21710 PF00119 ATP synthase A chain HQK30_21720 PF02195 ParB-like nuclease domain HQK30_21720 PF17762 HTH domain found in ParB protein HQK30_21725 PF13614 AAA domain HQK30_21730 PF02527 rRNA small subunit methyltransferase G HQK30_21735 PF13932 GidA associated domain HQK30_21735 PF01134 Glucose inhibited division protein A HQK30_21740 PF00258 Flavodoxin HQK30_21745 PF07715 TonB-dependent Receptor Plug Domain HQK30_21745 PF00593 TonB dependent receptor HQK30_21750 PF00005 ABC transporter HQK30_21755 PF00005 ABC transporter HQK30_21765 PF01032 FecCD transport family HQK30_21770 PF01926 50S ribosome-binding GTPase HQK30_21770 PF12631 MnmE helical domain HQK30_21770 PF10396 GTP-binding protein TrmE N-terminus HQK30_21775 PF14849 YidC periplasmic domain HQK30_21775 PF02096 60Kd inner membrane protein HQK30_21780 PF01809 Putative membrane protein insertion efficiency factor HQK30_21785 PF00825 Ribonuclease P HQK30_21790 PF00468 Ribosomal protein L34 HQK30_21795 PF00005 ABC transporter HQK30_21800 PF00528 Binding-protein-dependent transport system inner membrane component HQK30_21805 PF00497 Bacterial extracellular solute-binding proteins, family 3