locus-tag class description NRZ33_00005 PF00308 Bacterial dnaA protein NRZ33_00005 PF08299 Bacterial dnaA protein helix-turn-helix NRZ33_00005 PF11638 DnaA N-terminal domain NRZ33_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NRZ33_00010 PF02767 DNA polymerase III beta subunit, central domain NRZ33_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NRZ33_00015 PF02463 RecF/RecN/SMC N terminal domain NRZ33_00020 PF00204 DNA gyrase B NRZ33_00020 PF00986 DNA gyrase B subunit, carboxyl terminus NRZ33_00020 PF18053 DNA gyrase B subunit insert domain NRZ33_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_00020 PF01751 Toprim domain NRZ33_00030 PF13280 WYL domain NRZ33_00030 PF08279 HTH domain NRZ33_00035 PF01965 DJ-1/PfpI family NRZ33_00035 PF12833 Helix-turn-helix domain NRZ33_00040 PF12706 Beta-lactamase superfamily domain NRZ33_00045 PF00011 Hsp20/alpha crystallin family NRZ33_00050 PF00011 Hsp20/alpha crystallin family NRZ33_00055 PF00155 Aminotransferase class I and II NRZ33_00070 PF07690 Major Facilitator Superfamily NRZ33_00075 PF00072 Response regulator receiver domain NRZ33_00075 PF00486 Transcriptional regulatory protein, C terminal NRZ33_00080 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_00080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_00080 PF13492 GAF domain NRZ33_00080 PF02702 Osmosensitive K+ channel His kinase sensor domain NRZ33_00080 PF13493 Domain of unknown function (DUF4118) NRZ33_00085 PF02669 K+-transporting ATPase, c chain NRZ33_00095 PF03814 Potassium-transporting ATPase A subunit NRZ33_00100 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ33_00100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRZ33_00105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_00105 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_00105 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ33_00110 PF00873 AcrB/AcrD/AcrF family NRZ33_00115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ33_00120 PF00440 Bacterial regulatory proteins, tetR family NRZ33_00150 PF02887 Pyruvate kinase, alpha/beta domain NRZ33_00150 PF00224 Pyruvate kinase, barrel domain NRZ33_00155 PF07690 Major Facilitator Superfamily NRZ33_00165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_00165 PF00672 HAMP domain NRZ33_00165 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_00170 PF00072 Response regulator receiver domain NRZ33_00170 PF02954 Bacterial regulatory protein, Fis family NRZ33_00170 PF14532 Sigma-54 interaction domain NRZ33_00185 PF12146 Serine aminopeptidase, S33 NRZ33_00190 PF00132 Bacterial transferase hexapeptide (six repeats) NRZ33_00195 PF00588 SpoU rRNA Methylase family NRZ33_00195 PF12105 SpoU, rRNA methylase, C-terminal NRZ33_00200 PF13291 ACT domain NRZ33_00200 PF02824 TGS domain NRZ33_00200 PF04607 Region found in RelA / SpoT proteins NRZ33_00205 PF01192 RNA polymerase Rpb6 NRZ33_00210 PF00625 Guanylate kinase NRZ33_00215 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NRZ33_00230 PF00892 EamA-like transporter family NRZ33_00250 PF03466 LysR substrate binding domain NRZ33_00250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_00255 PF00579 tRNA synthetases class I (W and Y) NRZ33_00260 PF00582 Universal stress protein family NRZ33_00270 PF07055 Enoyl reductase FAD binding domain NRZ33_00270 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NRZ33_00270 PF12241 Trans-2-enoyl-CoA reductase catalytic region NRZ33_00275 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_00280 PF00210 Ferritin-like domain NRZ33_00290 PF07690 Major Facilitator Superfamily NRZ33_00295 PF01810 LysE type translocator NRZ33_00305 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NRZ33_00305 PF02753 Pili assembly chaperone PapD, C-terminal domain NRZ33_00310 PF13954 PapC N-terminal domain NRZ33_00310 PF13953 PapC C-terminal domain NRZ33_00310 PF00577 Outer membrane usher protein NRZ33_00320 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NRZ33_00320 PF02753 Pili assembly chaperone PapD, C-terminal domain NRZ33_00330 PF00072 Response regulator receiver domain NRZ33_00330 PF00196 Bacterial regulatory proteins, luxR family NRZ33_00335 PF01627 Hpt domain NRZ33_00335 PF00989 PAS fold NRZ33_00335 PF00072 Response regulator receiver domain NRZ33_00335 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ33_00335 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_00335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_00350 PF01810 LysE type translocator NRZ33_00365 PF15976 CS1-pili formation C-terminal NRZ33_00365 PF16967 E-set like domain NRZ33_00370 PF18649 EcpB C-terminal domain NRZ33_00375 PF16449 Fimbrillin MatB NRZ33_00380 PF00196 Bacterial regulatory proteins, luxR family NRZ33_00380 PF00072 Response regulator receiver domain NRZ33_00395 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ33_00395 PF00989 PAS fold NRZ33_00395 PF00072 Response regulator receiver domain NRZ33_00395 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_00395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_00395 PF01627 Hpt domain NRZ33_00405 PF06580 Histidine kinase NRZ33_00405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_00405 PF07694 5TMR of 5TMR-LYT NRZ33_00410 PF00072 Response regulator receiver domain NRZ33_00410 PF04397 LytTr DNA-binding domain NRZ33_00415 PF07690 Major Facilitator Superfamily NRZ33_00420 PF02222 ATP-grasp domain NRZ33_00420 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NRZ33_00425 PF00731 AIR carboxylase NRZ33_00440 PF03466 LysR substrate binding domain NRZ33_00440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_00445 PF07715 TonB-dependent Receptor Plug Domain NRZ33_00445 PF00593 TonB dependent receptor NRZ33_00450 PF01177 Asp/Glu/Hydantoin racemase NRZ33_00485 PF00899 ThiF family NRZ33_00490 PF02657 Fe-S metabolism associated domain NRZ33_00495 PF00266 Aminotransferase class-V NRZ33_00500 PF00580 UvrD/REP helicase N-terminal domain NRZ33_00500 PF13361 UvrD-like helicase C-terminal domain NRZ33_00505 PF00563 EAL domain NRZ33_00505 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_00505 PF03707 Bacterial signalling protein N terminal repeat NRZ33_00510 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NRZ33_00515 PF00107 Zinc-binding dehydrogenase NRZ33_00515 PF08240 Alcohol dehydrogenase GroES-like domain NRZ33_00520 PF00155 Aminotransferase class I and II NRZ33_00525 PF08360 QacR-like protein, C-terminal region NRZ33_00525 PF00440 Bacterial regulatory proteins, tetR family NRZ33_00530 PF01370 NAD dependent epimerase/dehydratase family NRZ33_00545 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) NRZ33_00565 PF00593 TonB dependent receptor NRZ33_00565 PF07715 TonB-dependent Receptor Plug Domain NRZ33_00570 PF01497 Periplasmic binding protein NRZ33_00575 PF00005 ABC transporter NRZ33_00580 PF01032 FecCD transport family NRZ33_00585 PF01032 FecCD transport family NRZ33_00590 PF00005 ABC transporter NRZ33_00595 PF00005 ABC transporter NRZ33_00595 PF08021 Siderophore-interacting FAD-binding domain NRZ33_00595 PF04954 Siderophore-interacting protein NRZ33_00595 PF00664 ABC transporter transmembrane region NRZ33_00605 PF00501 AMP-binding enzyme NRZ33_00605 PF13193 AMP-binding enzyme C-terminal domain NRZ33_00605 PF00668 Condensation domain NRZ33_00605 PF00550 Phosphopantetheine attachment site NRZ33_00610 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NRZ33_00615 PF00501 AMP-binding enzyme NRZ33_00615 PF00668 Condensation domain NRZ33_00615 PF00550 Phosphopantetheine attachment site NRZ33_00625 PF00282 Pyridoxal-dependent decarboxylase conserved domain NRZ33_00630 PF08340 Domain of unknown function (DUF1732) NRZ33_00630 PF03755 YicC-like family, N-terminal region NRZ33_00635 PF01138 3' exoribonuclease family, domain 1 NRZ33_00635 PF03725 3' exoribonuclease family, domain 2 NRZ33_00640 PF00156 Phosphoribosyl transferase domain NRZ33_00645 PF00403 Heavy-metal-associated domain NRZ33_00650 PF13411 MerR HTH family regulatory protein NRZ33_00655 PF01590 GAF domain NRZ33_00655 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_00655 PF00360 Phytochrome region NRZ33_00655 PF00563 EAL domain NRZ33_00660 PF06288 Protein of unknown function (DUF1040) NRZ33_00665 PF12801 4Fe-4S binding domain NRZ33_00665 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase NRZ33_00665 PF13746 4Fe-4S dicluster domain NRZ33_00670 PF01636 Phosphotransferase enzyme family NRZ33_00675 PF01323 DSBA-like thioredoxin domain NRZ33_00680 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NRZ33_00680 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NRZ33_00685 PF00857 Isochorismatase family NRZ33_00695 PF04463 Protein of unknown function (DUF523) NRZ33_00700 PF01553 Acyltransferase NRZ33_00705 PF01553 Acyltransferase NRZ33_00710 PF01078 Magnesium chelatase, subunit ChlI NRZ33_00710 PF13335 Magnesium chelatase, subunit ChlI C-terminal NRZ33_00715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRZ33_00715 PF00205 Thiamine pyrophosphate enzyme, central domain NRZ33_00715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NRZ33_00725 PF01063 Amino-transferase class IV NRZ33_00730 PF00920 Dehydratase family NRZ33_00735 PF00291 Pyridoxal-phosphate dependent enzyme NRZ33_00735 PF00585 C-terminal regulatory domain of Threonine dehydratase NRZ33_00740 PF01389 OmpA-like transmembrane domain NRZ33_00740 PF00691 OmpA family NRZ33_00750 PF00270 DEAD/DEAH box helicase NRZ33_00750 PF00271 Helicase conserved C-terminal domain NRZ33_00750 PF18074 Primosomal protein N C-terminal domain NRZ33_00750 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NRZ33_00750 PF17764 3′ DNA-binding domain (3′BD) NRZ33_00755 PF01197 Ribosomal protein L31 NRZ33_00760 PF13460 NAD(P)H-binding NRZ33_00760 PF11066 Protein of unknown function (DUF2867) NRZ33_00765 PF00390 Malic enzyme, N-terminal domain NRZ33_00765 PF03949 Malic enzyme, NAD binding domain NRZ33_00775 PF00672 HAMP domain NRZ33_00775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_00775 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_00780 PF00072 Response regulator receiver domain NRZ33_00780 PF00486 Transcriptional regulatory protein, C terminal NRZ33_00785 PF05958 tRNA (Uracil-5-)-methyltransferase NRZ33_00820 PF16254 Domain of unknown function (DUF4910) NRZ33_00820 PF16221 winged helix-turn-helix NRZ33_00820 PF09940 Domain of unknown function (DUF2172) NRZ33_00840 PF08666 SAF domain NRZ33_00840 PF03102 NeuB family NRZ33_00850 PF02348 Cytidylyltransferase NRZ33_00870 PF00501 AMP-binding enzyme NRZ33_00870 PF13193 AMP-binding enzyme C-terminal domain NRZ33_00885 PF00535 Glycosyl transferase family 2 NRZ33_00890 PF03275 UDP-galactopyranose mutase NRZ33_00925 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NRZ33_00930 PF00733 Asparagine synthase NRZ33_00930 PF13537 Glutamine amidotransferase domain NRZ33_00940 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NRZ33_00945 PF02719 Polysaccharide biosynthesis protein NRZ33_00950 PF00128 Alpha amylase, catalytic domain NRZ33_00950 PF02903 Alpha amylase, N-terminal ig-like domain NRZ33_00965 PF00012 Hsp70 protein NRZ33_00970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRZ33_00970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRZ33_00975 PF05981 CreA protein NRZ33_00990 PF01258 Prokaryotic dksA/traR C4-type zinc finger NRZ33_00995 PF00120 Glutamine synthetase, catalytic domain NRZ33_01000 PF00202 Aminotransferase class-III NRZ33_01005 PF13416 Bacterial extracellular solute-binding protein NRZ33_01010 PF13416 Bacterial extracellular solute-binding protein NRZ33_01015 PF08402 TOBE domain NRZ33_01015 PF00005 ABC transporter NRZ33_01020 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_01025 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_01030 PF03473 MOSC domain NRZ33_01030 PF03475 3-alpha domain NRZ33_01045 PF03061 Thioesterase superfamily NRZ33_01050 PF00270 DEAD/DEAH box helicase NRZ33_01050 PF00271 Helicase conserved C-terminal domain NRZ33_01050 PF00570 HRDC domain NRZ33_01050 PF16124 RecQ zinc-binding NRZ33_01050 PF09382 RQC domain NRZ33_01055 PF00034 Cytochrome c NRZ33_01060 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NRZ33_01070 PF02592 Putative vitamin uptake transporter NRZ33_01075 PF03737 Aldolase/RraA NRZ33_01080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_01080 PF00672 HAMP domain NRZ33_01085 PF00571 CBS domain NRZ33_01085 PF01769 Divalent cation transporter NRZ33_01085 PF03448 MgtE intracellular N domain NRZ33_01090 PF10414 Sirohaem synthase dimerisation region NRZ33_01090 PF14824 Sirohaem biosynthesis protein central NRZ33_01090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NRZ33_01095 PF01226 Formate/nitrite transporter NRZ33_01100 PF13806 Rieske-like [2Fe-2S] domain NRZ33_01110 PF18267 Rubredoxin NAD+ reductase C-terminal domain NRZ33_01110 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NRZ33_01110 PF04324 BFD-like [2Fe-2S] binding domain NRZ33_01110 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ33_01110 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NRZ33_01125 PF00005 ABC transporter NRZ33_01130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ33_01140 PF00004 ATPase family associated with various cellular activities (AAA) NRZ33_01140 PF10431 C-terminal, D2-small domain, of ClpB protein NRZ33_01140 PF07724 AAA domain (Cdc48 subfamily) NRZ33_01145 PF00227 Proteasome subunit NRZ33_01155 PF03485 Arginyl tRNA synthetase N terminal domain NRZ33_01155 PF00750 tRNA synthetases class I (R) NRZ33_01155 PF05746 DALR anticodon binding domain NRZ33_01165 PF04545 Sigma-70, region 4 NRZ33_01165 PF04542 Sigma-70 region 2 NRZ33_01170 PF12973 ChrR Cupin-like domain NRZ33_01175 PF02673 Bacitracin resistance protein BacA NRZ33_01180 PF00248 Aldo/keto reductase family NRZ33_01185 PF01263 Aldose 1-epimerase NRZ33_01190 PF10509 Galactokinase galactose-binding signature NRZ33_01190 PF08544 GHMP kinases C terminal NRZ33_01190 PF00288 GHMP kinases N terminal domain NRZ33_01195 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NRZ33_01195 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NRZ33_01200 PF16363 GDP-mannose 4,6 dehydratase NRZ33_01205 PF00356 Bacterial regulatory proteins, lacI family NRZ33_01210 PF02929 Beta galactosidase small chain NRZ33_01210 PF16353 Domain of unknown function(DUF4981) NRZ33_01210 PF00703 Glycosyl hydrolases family 2 NRZ33_01210 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NRZ33_01210 PF02837 Glycosyl hydrolases family 2, sugar binding domain NRZ33_01215 PF13407 Periplasmic binding protein domain NRZ33_01220 PF00005 ABC transporter NRZ33_01225 PF02653 Branched-chain amino acid transport system / permease component NRZ33_01230 PF02743 Cache domain NRZ33_01230 PF00672 HAMP domain NRZ33_01230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_01255 PF00696 Amino acid kinase family NRZ33_01260 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NRZ33_01260 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NRZ33_01265 PF03606 C4-dicarboxylate anaerobic carrier NRZ33_01270 PF02863 Arginine repressor, C-terminal domain NRZ33_01270 PF01316 Arginine repressor, DNA binding domain NRZ33_01275 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain NRZ33_01275 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain NRZ33_01280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NRZ33_01280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NRZ33_01300 PF02666 Phosphatidylserine decarboxylase NRZ33_01305 PF00672 HAMP domain NRZ33_01305 PF02743 Cache domain NRZ33_01305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_01310 PF08212 Lipocalin-like domain NRZ33_01315 PF06719 AraC-type transcriptional regulator N-terminus NRZ33_01315 PF12833 Helix-turn-helix domain NRZ33_01320 PF00465 Iron-containing alcohol dehydrogenase NRZ33_01325 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NRZ33_01325 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NRZ33_01325 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NRZ33_01330 PF02233 NAD(P) transhydrogenase beta subunit NRZ33_01340 PF03313 Serine dehydratase alpha chain NRZ33_01345 PF00375 Sodium:dicarboxylate symporter family NRZ33_01350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRZ33_01350 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ33_01355 PF13525 Outer membrane lipoprotein NRZ33_01360 PF00849 RNA pseudouridylate synthase NRZ33_01360 PF01479 S4 domain NRZ33_01365 PF02578 Multi-copper polyphenol oxidoreductase laccase NRZ33_01370 PF00004 ATPase family associated with various cellular activities (AAA) NRZ33_01370 PF07724 AAA domain (Cdc48 subfamily) NRZ33_01370 PF17871 AAA lid domain NRZ33_01370 PF02861 Clp amino terminal domain, pathogenicity island component NRZ33_01370 PF10431 C-terminal, D2-small domain, of ClpB protein NRZ33_01380 PF03590 Aspartate-ammonia ligase NRZ33_01385 PF01037 Lrp/AsnC ligand binding domain NRZ33_01395 PF10063 Uncharacterized integral membrane protein (DUF2301) NRZ33_01400 PF00478 IMP dehydrogenase / GMP reductase domain NRZ33_01400 PF00571 CBS domain NRZ33_01420 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_01430 PF00072 Response regulator receiver domain NRZ33_01430 PF00158 Sigma-54 interaction domain NRZ33_01435 PF06496 Protein of unknown function (DUF1097) NRZ33_01440 PF00174 Oxidoreductase molybdopterin binding domain NRZ33_01445 PF01794 Ferric reductase like transmembrane component NRZ33_01460 PF00072 Response regulator receiver domain NRZ33_01460 PF00486 Transcriptional regulatory protein, C terminal NRZ33_01465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_01475 PF01568 Molydopterin dinucleotide binding domain NRZ33_01475 PF18364 Molybdopterin oxidoreductase N-terminal domain NRZ33_01475 PF00384 Molybdopterin oxidoreductase NRZ33_01480 PF03264 NapC/NirT cytochrome c family, N-terminal region NRZ33_01485 PF01751 Toprim domain NRZ33_01485 PF01131 DNA topoisomerase NRZ33_01500 PF12833 Helix-turn-helix domain NRZ33_01500 PF12852 Cupin NRZ33_01505 PF02386 Cation transport protein NRZ33_01510 PF02080 TrkA-C domain NRZ33_01510 PF02254 TrkA-N domain NRZ33_01515 PF01565 FAD binding domain NRZ33_01515 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NRZ33_01520 PF02237 Biotin protein ligase C terminal domain NRZ33_01520 PF03099 Biotin/lipoate A/B protein ligase family NRZ33_01520 PF08279 HTH domain NRZ33_01525 PF00485 Phosphoribulokinase / Uridine kinase family NRZ33_01540 PF03144 Elongation factor Tu domain 2 NRZ33_01540 PF00009 Elongation factor Tu GTP binding domain NRZ33_01540 PF03143 Elongation factor Tu C-terminal domain NRZ33_01550 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NRZ33_01555 PF00467 KOW motif NRZ33_01555 PF02357 Transcription termination factor nusG NRZ33_01560 PF00298 Ribosomal protein L11, RNA binding domain NRZ33_01560 PF03946 Ribosomal protein L11, N-terminal domain NRZ33_01565 PF00687 Ribosomal protein L1p/L10e family NRZ33_01570 PF00466 Ribosomal protein L10 NRZ33_01575 PF00542 Ribosomal protein L7/L12 C-terminal domain NRZ33_01575 PF16320 Ribosomal protein L7/L12 dimerisation domain NRZ33_01580 PF00562 RNA polymerase Rpb2, domain 6 NRZ33_01580 PF04560 RNA polymerase Rpb2, domain 7 NRZ33_01580 PF04565 RNA polymerase Rpb2, domain 3 NRZ33_01580 PF10385 RNA polymerase beta subunit external 1 domain NRZ33_01580 PF04563 RNA polymerase beta subunit NRZ33_01580 PF04561 RNA polymerase Rpb2, domain 2 NRZ33_01585 PF04997 RNA polymerase Rpb1, domain 1 NRZ33_01585 PF00623 RNA polymerase Rpb1, domain 2 NRZ33_01585 PF04983 RNA polymerase Rpb1, domain 3 NRZ33_01585 PF04998 RNA polymerase Rpb1, domain 5 NRZ33_01585 PF05000 RNA polymerase Rpb1, domain 4 NRZ33_01590 PF13309 HTH domain NRZ33_01590 PF08348 YheO-like PAS domain NRZ33_01595 PF01042 Endoribonuclease L-PSP NRZ33_01600 PF02635 DsrE/DsrF-like family NRZ33_01605 PF02635 DsrE/DsrF-like family NRZ33_01610 PF04077 DsrH like protein NRZ33_01615 PF00164 Ribosomal protein S12/S23 NRZ33_01620 PF00177 Ribosomal protein S7p/S5e NRZ33_01625 PF00679 Elongation factor G C-terminus NRZ33_01625 PF14492 Elongation Factor G, domain II NRZ33_01625 PF03764 Elongation factor G, domain IV NRZ33_01625 PF00009 Elongation factor Tu GTP binding domain NRZ33_01625 PF03144 Elongation factor Tu domain 2 NRZ33_01630 PF03143 Elongation factor Tu C-terminal domain NRZ33_01630 PF00009 Elongation factor Tu GTP binding domain NRZ33_01630 PF03144 Elongation factor Tu domain 2 NRZ33_01670 PF00860 Permease family NRZ33_01675 PF02733 Dak1 domain NRZ33_01680 PF02734 DAK2 domain NRZ33_01685 PF03610 PTS system fructose IIA component NRZ33_01685 PF05524 PEP-utilising enzyme, N-terminal NRZ33_01685 PF00391 PEP-utilising enzyme, mobile domain NRZ33_01685 PF00381 PTS HPr component phosphorylation site NRZ33_01690 PF00465 Iron-containing alcohol dehydrogenase NRZ33_01695 PF02954 Bacterial regulatory protein, Fis family NRZ33_01695 PF00989 PAS fold NRZ33_01695 PF00158 Sigma-54 interaction domain NRZ33_01700 PF04371 Porphyromonas-type peptidyl-arginine deiminase NRZ33_01710 PF01594 AI-2E family transporter NRZ33_01715 PF00293 NUDIX domain NRZ33_01740 PF00199 Catalase NRZ33_01740 PF06628 Catalase-related immune-responsive NRZ33_01745 PF00583 Acetyltransferase (GNAT) family NRZ33_01765 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_01775 PF00005 ABC transporter NRZ33_01775 PF08402 TOBE domain NRZ33_01785 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_01800 PF07702 UTRA domain NRZ33_01800 PF00392 Bacterial regulatory proteins, gntR family NRZ33_01810 PF03466 LysR substrate binding domain NRZ33_01810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_01820 PF17954 Quercetinase C-terminal cupin domain NRZ33_01820 PF02678 Pirin NRZ33_01825 PF07681 DoxX NRZ33_01830 PF17946 RecC C-terminal domain NRZ33_01835 PF12705 PD-(D/E)XK nuclease superfamily NRZ33_01835 PF00580 UvrD/REP helicase N-terminal domain NRZ33_01835 PF13361 UvrD-like helicase C-terminal domain NRZ33_01840 PF13538 UvrD-like helicase C-terminal domain NRZ33_01850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRZ33_01860 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_01880 PF00486 Transcriptional regulatory protein, C terminal NRZ33_01880 PF00072 Response regulator receiver domain NRZ33_01885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_01885 PF00672 HAMP domain NRZ33_01885 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_01890 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_01890 PF08448 PAS fold NRZ33_01895 PF00593 TonB dependent receptor NRZ33_01895 PF07715 TonB-dependent Receptor Plug Domain NRZ33_01900 PF00313 'Cold-shock' DNA-binding domain NRZ33_01910 PF16916 Dimerisation domain of Zinc Transporter NRZ33_01910 PF01545 Cation efflux family NRZ33_01925 PF00436 Single-strand binding protein family NRZ33_01930 PF00196 Bacterial regulatory proteins, luxR family NRZ33_01935 PF00005 ABC transporter NRZ33_01935 PF17755 UvrA DNA-binding domain NRZ33_01935 PF17760 UvrA interaction domain NRZ33_01940 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_01945 PF03922 OmpW family NRZ33_01950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_01950 PF00672 HAMP domain NRZ33_01950 PF12729 Four helix bundle sensory module for signal transduction NRZ33_01965 PF02219 Methylenetetrahydrofolate reductase NRZ33_01975 PF03594 Benzoate membrane transport protein NRZ33_01980 PF01381 Helix-turn-helix NRZ33_01980 PF07883 Cupin domain NRZ33_02015 PF04363 Protein of unknown function (DUF496) NRZ33_02025 PF04751 Protein of unknown function (DUF615) NRZ33_02030 PF01523 Putative modulator of DNA gyrase NRZ33_02035 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NRZ33_02040 PF01722 BolA-like protein NRZ33_02050 PF05494 MlaC protein NRZ33_02055 PF02470 MlaD protein NRZ33_02060 PF02405 Permease MlaE NRZ33_02065 PF00005 ABC transporter NRZ33_02070 PF00571 CBS domain NRZ33_02070 PF01380 SIS domain NRZ33_02080 PF06835 Lipopolysaccharide-assembly, LptC-related NRZ33_02085 PF03968 OstA-like protein NRZ33_02090 PF00005 ABC transporter NRZ33_02090 PF12399 Branched-chain amino acid ATP-binding cassette transporter NRZ33_02095 PF00309 Sigma-54 factor, Activator interacting domain (AID) NRZ33_02095 PF04963 Sigma-54 factor, core binding domain NRZ33_02095 PF04552 Sigma-54, DNA binding domain NRZ33_02100 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NRZ33_02105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRZ33_02110 PF03668 P-loop ATPase protein family NRZ33_02115 PF00381 PTS HPr component phosphorylation site NRZ33_02120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRZ33_02120 PF05043 Mga helix-turn-helix domain NRZ33_02120 PF00874 PRD domain NRZ33_02120 PF08279 HTH domain NRZ33_02125 PF07071 KDGP aldolase NRZ33_02130 PF03841 L-seryl-tRNA selenium transferase NRZ33_02135 PF01979 Amidohydrolase family NRZ33_02165 PF13180 PDZ domain NRZ33_02170 PF00595 PDZ domain NRZ33_02170 PF13180 PDZ domain NRZ33_02180 PF03969 AFG1-like ATPase NRZ33_02185 PF00572 Ribosomal protein L13 NRZ33_02190 PF00380 Ribosomal protein S9/S16 NRZ33_02195 PF00355 Rieske [2Fe-2S] domain NRZ33_02195 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NRZ33_02200 PF00032 Cytochrome b(C-terminal)/b6/petD NRZ33_02200 PF00033 Cytochrome b/b6/petB NRZ33_02205 PF02167 Cytochrome C1 family NRZ33_02210 PF02798 Glutathione S-transferase, N-terminal domain NRZ33_02210 PF00043 Glutathione S-transferase, C-terminal domain NRZ33_02215 PF04386 Stringent starvation protein B NRZ33_02220 PF04972 BON domain NRZ33_02225 PF13580 SIS domain NRZ33_02230 PF02021 Uncharacterised protein family UPF0102 NRZ33_02235 PF04348 LppC putative lipoprotein NRZ33_02240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NRZ33_02250 PF02381 MraZ protein, putative antitoxin-like NRZ33_02255 PF01795 MraW methylase family NRZ33_02260 PF04999 Cell division protein FtsL NRZ33_02265 PF03717 Penicillin-binding Protein dimerisation domain NRZ33_02265 PF00905 Penicillin binding protein transpeptidase domain NRZ33_02270 PF01225 Mur ligase family, catalytic domain NRZ33_02270 PF02875 Mur ligase family, glutamate ligase domain NRZ33_02270 PF08245 Mur ligase middle domain NRZ33_02275 PF02875 Mur ligase family, glutamate ligase domain NRZ33_02275 PF08245 Mur ligase middle domain NRZ33_02275 PF01225 Mur ligase family, catalytic domain NRZ33_02280 PF00953 Glycosyl transferase family 4 NRZ33_02280 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NRZ33_02285 PF02875 Mur ligase family, glutamate ligase domain NRZ33_02285 PF08245 Mur ligase middle domain NRZ33_02290 PF01098 Cell cycle protein NRZ33_02295 PF03033 Glycosyltransferase family 28 N-terminal domain NRZ33_02295 PF04101 Glycosyltransferase family 28 C-terminal domain NRZ33_02300 PF02875 Mur ligase family, glutamate ligase domain NRZ33_02300 PF01225 Mur ligase family, catalytic domain NRZ33_02300 PF08245 Mur ligase middle domain NRZ33_02305 PF08478 POTRA domain, FtsQ-type NRZ33_02305 PF03799 Cell division protein FtsQ NRZ33_02310 PF02491 SHS2 domain inserted in FTSA NRZ33_02315 PF12327 FtsZ family, C-terminal domain NRZ33_02315 PF00091 Tubulin/FtsZ family, GTPase domain NRZ33_02320 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NRZ33_02330 PF07516 SecA Wing and Scaffold domain NRZ33_02330 PF07517 SecA DEAD-like domain NRZ33_02330 PF02810 SEC-C motif NRZ33_02330 PF01043 SecA preprotein cross-linking domain NRZ33_02340 PF00293 NUDIX domain NRZ33_02345 PF03884 DNA gyrase inhibitor YacG NRZ33_02350 PF07072 Cell division protein NRZ33_02355 PF01121 Dephospho-CoA kinase NRZ33_02360 PF06750 Bacterial Peptidase A24 N-terminal domain NRZ33_02360 PF01478 Type IV leader peptidase family NRZ33_02365 PF00482 Type II secretion system (T2SS), protein F NRZ33_02370 PF00437 Type II/IV secretion system protein NRZ33_02370 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NRZ33_02375 PF07963 Prokaryotic N-terminal methylation motif NRZ33_02380 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NRZ33_02380 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NRZ33_02390 PF01510 N-acetylmuramoyl-L-alanine amidase NRZ33_02395 PF00392 Bacterial regulatory proteins, gntR family NRZ33_02395 PF07729 FCD domain NRZ33_02400 PF17831 Pyruvate dehydrogenase E1 component middle domain NRZ33_02400 PF00456 Transketolase, thiamine diphosphate binding domain NRZ33_02405 PF02817 e3 binding domain NRZ33_02405 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NRZ33_02405 PF00364 Biotin-requiring enzyme NRZ33_02410 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ33_02410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRZ33_02420 PF12729 Four helix bundle sensory module for signal transduction NRZ33_02420 PF00672 HAMP domain NRZ33_02420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_02425 PF12729 Four helix bundle sensory module for signal transduction NRZ33_02425 PF00672 HAMP domain NRZ33_02425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_02430 PF01734 Patatin-like phospholipase NRZ33_02435 PF00330 Aconitase family (aconitate hydratase) NRZ33_02435 PF11791 Aconitate B N-terminal domain NRZ33_02435 PF06434 Aconitate hydratase 2 N-terminus NRZ33_02440 PF03466 LysR substrate binding domain NRZ33_02440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_02445 PF01810 LysE type translocator NRZ33_02450 PF01565 FAD binding domain NRZ33_02450 PF04030 D-arabinono-1,4-lactone oxidase NRZ33_02455 PF07683 Cobalamin synthesis protein cobW C-terminal domain NRZ33_02455 PF02492 CobW/HypB/UreG, nucleotide-binding domain NRZ33_02460 PF07690 Major Facilitator Superfamily NRZ33_02470 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NRZ33_02475 PF02152 Dihydroneopterin aldolase NRZ33_02480 PF02660 Glycerol-3-phosphate acyltransferase NRZ33_02515 PF07670 Nucleoside recognition NRZ33_02520 PF00072 Response regulator receiver domain NRZ33_02520 PF01584 CheW-like domain NRZ33_02530 PF05127 Helicase NRZ33_02530 PF08351 Domain of unknown function (DUF1726) NRZ33_02530 PF13718 GNAT acetyltransferase 2 NRZ33_02530 PF17176 tRNA-binding domain NRZ33_02545 PF00210 Ferritin-like domain NRZ33_02555 PF02142 MGS-like domain NRZ33_02570 PF17763 Glutaminase/Asparaginase C-terminal domain NRZ33_02570 PF00710 Asparaginase, N-terminal NRZ33_02585 PF00356 Bacterial regulatory proteins, lacI family NRZ33_02590 PF00367 phosphotransferase system, EIIB NRZ33_02590 PF02378 Phosphotransferase system, EIIC NRZ33_02595 PF11941 Domain of unknown function (DUF3459) NRZ33_02595 PF00128 Alpha amylase, catalytic domain NRZ33_02600 PF14602 Hexapeptide repeat of succinyl-transferase NRZ33_02600 PF12464 Maltose acetyltransferase NRZ33_02610 PF00171 Aldehyde dehydrogenase family NRZ33_02615 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_02620 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_02625 PF00005 ABC transporter NRZ33_02625 PF08402 TOBE domain NRZ33_02630 PF13416 Bacterial extracellular solute-binding protein NRZ33_02635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_02635 PF03466 LysR substrate binding domain NRZ33_02640 PF03553 Na+/H+ antiporter family NRZ33_02680 PF00534 Glycosyl transferases group 1 NRZ33_02680 PF08323 Starch synthase catalytic domain NRZ33_02685 PF00483 Nucleotidyl transferase NRZ33_02690 PF08468 Methyltransferase small domain N-terminal NRZ33_02690 PF05175 Methyltransferase small domain NRZ33_02695 PF00701 Dihydrodipicolinate synthetase family NRZ33_02700 PF00360 Phytochrome region NRZ33_02700 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_02700 PF01590 GAF domain NRZ33_02700 PF00563 EAL domain NRZ33_02710 PF13419 Haloacid dehalogenase-like hydrolase NRZ33_02715 PF17209 Hfq protein NRZ33_02720 PF04403 Paraquat-inducible protein A NRZ33_02725 PF02470 MlaD protein NRZ33_02730 PF03886 ABC-type transport auxiliary lipoprotein component NRZ33_02735 PF00691 OmpA family NRZ33_02735 PF01389 OmpA-like transmembrane domain NRZ33_02745 PF00657 GDSL-like Lipase/Acylhydrolase NRZ33_02750 PF04076 Bacterial OB fold (BOF) protein NRZ33_02755 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NRZ33_02755 PF01464 Transglycosylase SLT domain NRZ33_02760 PF04362 Bacterial Fe(2+) trafficking NRZ33_02765 PF14815 NUDIX domain NRZ33_02765 PF00633 Helix-hairpin-helix motif NRZ33_02765 PF00730 HhH-GPD superfamily base excision DNA repair protein NRZ33_02765 PF10576 Iron-sulfur binding domain of endonuclease III NRZ33_02770 PF16537 Type II secretion system protein B NRZ33_02775 PF13401 AAA domain NRZ33_02775 PF01471 Putative peptidoglycan binding domain NRZ33_02780 PF01966 HD domain NRZ33_02780 PF01743 Poly A polymerase head domain NRZ33_02780 PF12627 Probable RNA and SrmB- binding site of polymerase A NRZ33_02795 PF04172 LrgB-like family NRZ33_02800 PF03788 LrgA family NRZ33_02805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_02805 PF03466 LysR substrate binding domain NRZ33_02815 PF00392 Bacterial regulatory proteins, gntR family NRZ33_02815 PF00155 Aminotransferase class I and II NRZ33_02835 PF07350 Protein of unknown function (DUF1479) NRZ33_02840 PF04073 Aminoacyl-tRNA editing domain NRZ33_02845 PF01384 Phosphate transporter family NRZ33_02850 PF01865 Protein of unknown function DUF47 NRZ33_02865 PF03279 Bacterial lipid A biosynthesis acyltransferase NRZ33_02870 PF01467 Cytidylyltransferase-like NRZ33_02870 PF00294 pfkB family carbohydrate kinase NRZ33_02875 PF02321 Outer membrane efflux protein NRZ33_02880 PF00293 NUDIX domain NRZ33_02885 PF06853 Protein of unknown function (DUF1249) NRZ33_02890 PF00149 Calcineurin-like phosphoesterase NRZ33_02895 PF05728 Uncharacterised protein family (UPF0227) NRZ33_02900 PF00293 NUDIX domain NRZ33_02910 PF07869 Protein of unknown function (DUF1656) NRZ33_02915 PF00529 HlyD membrane-fusion protein of T1SS NRZ33_02915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ33_02920 PF04632 Fusaric acid resistance protein family NRZ33_02925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_02925 PF00204 DNA gyrase B NRZ33_02925 PF00986 DNA gyrase B subunit, carboxyl terminus NRZ33_02925 PF01751 Toprim domain NRZ33_02930 PF03989 DNA gyrase C-terminal domain, beta-propeller NRZ33_02930 PF00521 DNA gyrase/topoisomerase IV, subunit A NRZ33_02940 PF03466 LysR substrate binding domain NRZ33_02940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_02945 PF07690 Major Facilitator Superfamily NRZ33_02975 PF00226 DnaJ domain NRZ33_02975 PF01556 DnaJ C terminal domain NRZ33_02975 PF00684 DnaJ central domain NRZ33_02980 PF00578 AhpC/TSA family NRZ33_03000 PF01553 Acyltransferase NRZ33_03005 PF04012 PspA/IM30 family NRZ33_03020 PF01541 GIY-YIG catalytic domain NRZ33_03030 PF00892 EamA-like transporter family NRZ33_03035 PF03167 Uracil DNA glycosylase superfamily NRZ33_03040 PF00892 EamA-like transporter family NRZ33_03045 PF03466 LysR substrate binding domain NRZ33_03045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_03050 PF00950 ABC 3 transport family NRZ33_03055 PF00005 ABC transporter NRZ33_03060 PF01297 Zinc-uptake complex component A periplasmic NRZ33_03080 PF01476 LysM domain NRZ33_03080 PF08525 Opacity-associated protein A N-terminal motif NRZ33_03080 PF01551 Peptidase family M23 NRZ33_03085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRZ33_03090 PF04222 Protein of unknown function (DUF416) NRZ33_03105 PF02028 BCCT, betaine/carnitine/choline family transporter NRZ33_03110 PF05192 MutS domain III NRZ33_03110 PF05190 MutS family domain IV NRZ33_03110 PF01624 MutS domain I NRZ33_03110 PF05188 MutS domain II NRZ33_03110 PF00488 MutS domain V NRZ33_03115 PF02464 Competence-damaged protein NRZ33_03120 PF00154 recA bacterial DNA recombination protein NRZ33_03125 PF02631 RecX family NRZ33_03130 PF01411 tRNA synthetases class II (A) NRZ33_03130 PF02272 DHHA1 domain NRZ33_03130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NRZ33_03135 PF00696 Amino acid kinase family NRZ33_03135 PF01842 ACT domain NRZ33_03135 PF13840 ACT domain NRZ33_03140 PF02599 Global regulator protein family NRZ33_03170 PF00768 D-alanyl-D-alanine carboxypeptidase NRZ33_03175 PF09335 SNARE associated Golgi protein NRZ33_03180 PF01595 Cyclin M transmembrane N-terminal domain NRZ33_03180 PF03471 Transporter associated domain NRZ33_03180 PF00571 CBS domain NRZ33_03185 PF08264 Anticodon-binding domain of tRNA NRZ33_03185 PF00133 tRNA synthetases class I (I, L, M and V) NRZ33_03185 PF10458 Valyl tRNA synthetase tRNA binding arm NRZ33_03190 PF04364 DNA polymerase III chi subunit, HolC NRZ33_03195 PF02789 Cytosol aminopeptidase family, N-terminal domain NRZ33_03195 PF00883 Cytosol aminopeptidase family, catalytic domain NRZ33_03200 PF03739 Lipopolysaccharide export system permease LptF/LptG NRZ33_03205 PF03739 Lipopolysaccharide export system permease LptF/LptG NRZ33_03220 PF00909 Ammonium Transporter Family NRZ33_03225 PF01938 TRAM domain NRZ33_03225 PF05958 tRNA (Uracil-5-)-methyltransferase NRZ33_03235 PF07963 Prokaryotic N-terminal methylation motif NRZ33_03240 PF01026 TatD related DNase NRZ33_03245 PF07670 Nucleoside recognition NRZ33_03245 PF01773 Na+ dependent nucleoside transporter N-terminus NRZ33_03245 PF07662 Na+ dependent nucleoside transporter C-terminus NRZ33_03255 PF01791 DeoC/LacD family aldolase NRZ33_03260 PF00591 Glycosyl transferase family, a/b domain NRZ33_03260 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NRZ33_03260 PF02885 Glycosyl transferase family, helical bundle domain NRZ33_03265 PF01676 Metalloenzyme superfamily NRZ33_03270 PF01048 Phosphorylase superfamily NRZ33_03275 PF13426 PAS domain NRZ33_03275 PF08448 PAS fold NRZ33_03275 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_03275 PF00563 EAL domain NRZ33_03275 PF08447 PAS fold NRZ33_03275 PF05231 MASE1 NRZ33_03285 PF18429 Domain of unknown function (DUF5609) NRZ33_03300 PF18073 Rubredoxin metal binding domain NRZ33_03305 PF07238 PilZ domain NRZ33_03310 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ NRZ33_03320 PF00216 Bacterial DNA-binding protein NRZ33_03335 PF01207 Dihydrouridine synthase (Dus) NRZ33_03340 PF01475 Ferric uptake regulator family NRZ33_03355 PF05525 Branched-chain amino acid transport protein NRZ33_03360 PF05525 Branched-chain amino acid transport protein NRZ33_03365 PF05175 Methyltransferase small domain NRZ33_03370 PF00270 DEAD/DEAH box helicase NRZ33_03370 PF00271 Helicase conserved C-terminal domain NRZ33_03375 PF03883 Peroxide stress protein YaaA NRZ33_03380 PF00437 Type II/IV secretion system protein NRZ33_03385 PF00437 Type II/IV secretion system protein NRZ33_03390 PF01168 Alanine racemase, N-terminal domain NRZ33_03395 PF14748 Pyrroline-5-carboxylate reductase dimerisation NRZ33_03395 PF03807 NADP oxidoreductase coenzyme F420-dependent NRZ33_03400 PF02325 YGGT family NRZ33_03405 PF02594 Uncharacterised ACR, YggU family COG1872 NRZ33_03420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ33_03430 PF00132 Bacterial transferase hexapeptide (six repeats) NRZ33_03435 PF10952 Protein of unknown function (DUF2753) NRZ33_03440 PF00378 Enoyl-CoA hydratase/isomerase NRZ33_03455 PF00106 short chain dehydrogenase NRZ33_03460 PF04073 Aminoacyl-tRNA editing domain NRZ33_03460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NRZ33_03460 PF03129 Anticodon binding domain NRZ33_03465 PF00672 HAMP domain NRZ33_03465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_03470 PF01330 RuvA N terminal domain NRZ33_03470 PF07499 RuvA, C-terminal domain NRZ33_03475 PF17864 RuvB AAA lid domain NRZ33_03475 PF05496 Holliday junction DNA helicase RuvB P-loop domain NRZ33_03475 PF05491 RuvB C-terminal winged helix domain NRZ33_03480 PF01654 Cytochrome bd terminal oxidase subunit I NRZ33_03485 PF02322 Cytochrome bd terminal oxidase subunit II NRZ33_03490 PF08173 Membrane bound YbgT-like protein NRZ33_03495 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) NRZ33_03500 PF03061 Thioesterase superfamily NRZ33_03505 PF01618 MotA/TolQ/ExbB proton channel family NRZ33_03510 PF02472 Biopolymer transport protein ExbD/TolR NRZ33_03520 PF04052 TolB amino-terminal domain NRZ33_03520 PF07676 WD40-like Beta Propeller Repeat NRZ33_03525 PF00691 OmpA family NRZ33_03530 PF13174 Tetratricopeptide repeat NRZ33_03530 PF16331 TolA binding protein trimerisation NRZ33_03605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_03605 PF00672 HAMP domain NRZ33_03610 PF02445 Quinolinate synthetase A protein NRZ33_03615 PF01263 Aldose 1-epimerase NRZ33_03620 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NRZ33_03620 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NRZ33_03625 PF02446 4-alpha-glucanotransferase NRZ33_03630 PF02806 Alpha amylase, C-terminal all-beta domain NRZ33_03630 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NRZ33_03630 PF00128 Alpha amylase, catalytic domain NRZ33_03635 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NRZ33_03635 PF00128 Alpha amylase, catalytic domain NRZ33_03640 PF01641 SelR domain NRZ33_03650 PF00293 NUDIX domain NRZ33_03655 PF16884 N-terminal domain of oxidoreductase NRZ33_03655 PF00107 Zinc-binding dehydrogenase NRZ33_03660 PF02566 OsmC-like protein NRZ33_03665 PF01047 MarR family NRZ33_03680 PF01037 Lrp/AsnC ligand binding domain NRZ33_03695 PF07690 Major Facilitator Superfamily NRZ33_03715 PF00209 Sodium:neurotransmitter symporter family NRZ33_03725 PF00209 Sodium:neurotransmitter symporter family NRZ33_03750 PF00155 Aminotransferase class I and II NRZ33_03750 PF00392 Bacterial regulatory proteins, gntR family NRZ33_03760 PF01810 LysE type translocator NRZ33_03765 PF01177 Asp/Glu/Hydantoin racemase NRZ33_03770 PF00394 Multicopper oxidase NRZ33_03770 PF07732 Multicopper oxidase NRZ33_03770 PF07731 Multicopper oxidase NRZ33_03770 PF00394 Multicopper oxidase NRZ33_03770 PF07731 Multicopper oxidase NRZ33_03770 PF07732 Multicopper oxidase NRZ33_03780 PF04074 YhcH/YjgK/YiaL NRZ33_03785 PF00871 Acetokinase family NRZ33_03790 PF00924 Mechanosensitive ion channel NRZ33_03795 PF17969 L,D-transpeptidase C-terminal domain NRZ33_03795 PF03734 L,D-transpeptidase catalytic domain NRZ33_03800 PF00474 Sodium:solute symporter family NRZ33_03810 PF06877 Regulator of ribonuclease activity B NRZ33_03825 PF02525 Flavodoxin-like fold NRZ33_03830 PF03466 LysR substrate binding domain NRZ33_03830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_03835 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NRZ33_03845 PF00005 ABC transporter NRZ33_03845 PF12848 ABC transporter NRZ33_03850 PF00571 CBS domain NRZ33_03850 PF01380 SIS domain NRZ33_03855 PF01957 NfeD-like C-terminal, partner-binding NRZ33_03860 PF01145 SPFH domain / Band 7 family NRZ33_03860 PF16200 C-terminal region of band_7 NRZ33_03865 PF10414 Sirohaem synthase dimerisation region NRZ33_03865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NRZ33_03865 PF14824 Sirohaem biosynthesis protein central NRZ33_03870 PF01507 Phosphoadenosine phosphosulfate reductase family NRZ33_03875 PF00009 Elongation factor Tu GTP binding domain NRZ33_03880 PF03600 Citrate transporter NRZ33_03880 PF02080 TrkA-C domain NRZ33_03905 PF02798 Glutathione S-transferase, N-terminal domain NRZ33_03905 PF00043 Glutathione S-transferase, C-terminal domain NRZ33_03925 PF00005 ABC transporter NRZ33_03940 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) NRZ33_03955 PF00719 Inorganic pyrophosphatase NRZ33_03960 PF01225 Mur ligase family, catalytic domain NRZ33_03960 PF02875 Mur ligase family, glutamate ligase domain NRZ33_03960 PF08245 Mur ligase middle domain NRZ33_03965 PF02441 Flavoprotein NRZ33_03970 PF00440 Bacterial regulatory proteins, tetR family NRZ33_03975 PF00156 Phosphoribosyl transferase domain NRZ33_03980 PF00005 ABC transporter NRZ33_03985 PF01061 ABC-2 type transporter NRZ33_03990 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component NRZ33_03995 PF01869 BadF/BadG/BcrA/BcrD ATPase family NRZ33_04015 PF00375 Sodium:dicarboxylate symporter family NRZ33_04020 PF02569 Pantoate-beta-alanine ligase NRZ33_04025 PF02548 Ketopantoate hydroxymethyltransferase NRZ33_04030 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NRZ33_04035 PF01743 Poly A polymerase head domain NRZ33_04035 PF12626 Polymerase A arginine-rich C-terminus NRZ33_04035 PF12627 Probable RNA and SrmB- binding site of polymerase A NRZ33_04040 PF00749 tRNA synthetases class I (E and Q), catalytic domain NRZ33_04045 PF01258 Prokaryotic dksA/traR C4-type zinc finger NRZ33_04050 PF17746 SfsA N-terminal OB domain NRZ33_04050 PF03749 Sugar fermentation stimulation protein RE domain NRZ33_04060 PF00271 Helicase conserved C-terminal domain NRZ33_04060 PF08482 ATP-dependent helicase C-terminal NRZ33_04060 PF00270 DEAD/DEAH box helicase NRZ33_04060 PF04408 Helicase associated domain (HA2) NRZ33_04065 PF00905 Penicillin binding protein transpeptidase domain NRZ33_04065 PF14814 Bifunctional transglycosylase second domain NRZ33_04065 PF00912 Transglycosylase NRZ33_04070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRZ33_04075 PF00893 Small Multidrug Resistance protein NRZ33_04080 PF00893 Small Multidrug Resistance protein NRZ33_04090 PF11849 Domain of unknown function (DUF3369) NRZ33_04100 PF01569 PAP2 superfamily NRZ33_04115 PF00202 Aminotransferase class-III NRZ33_04120 PF00654 Voltage gated chloride channel NRZ33_04130 PF01521 Iron-sulphur cluster biosynthesis NRZ33_04155 PF01810 LysE type translocator NRZ33_04160 PF02954 Bacterial regulatory protein, Fis family NRZ33_04165 PF01207 Dihydrouridine synthase (Dus) NRZ33_04170 PF02321 Outer membrane efflux protein NRZ33_04175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ33_04205 PF00072 Response regulator receiver domain NRZ33_04210 PF00854 POT family NRZ33_04215 PF00483 Nucleotidyl transferase NRZ33_04225 PF00459 Inositol monophosphatase family NRZ33_04230 PF03795 YCII-related domain NRZ33_04235 PF04279 Intracellular septation protein A NRZ33_04240 PF00282 Pyridoxal-dependent decarboxylase conserved domain NRZ33_04245 PF03006 Haemolysin-III related NRZ33_04250 PF02080 TrkA-C domain NRZ33_04250 PF06826 Predicted Permease Membrane Region NRZ33_04260 PF01584 CheW-like domain NRZ33_04260 PF00072 Response regulator receiver domain NRZ33_04265 PF13472 GDSL-like Lipase/Acylhydrolase family NRZ33_04270 PF00005 ABC transporter NRZ33_04280 PF01370 NAD dependent epimerase/dehydratase family NRZ33_04280 PF08338 Domain of unknown function (DUF1731) NRZ33_04285 PF12792 CSS motif domain associated with EAL NRZ33_04285 PF00563 EAL domain NRZ33_04290 PF00155 Aminotransferase class I and II NRZ33_04295 PF01483 Proprotein convertase P-domain NRZ33_04295 PF04389 Peptidase family M28 NRZ33_04300 PF02390 Putative methyltransferase NRZ33_04305 PF04320 Protein with unknown function (DUF469) NRZ33_04310 PF04960 Glutaminase NRZ33_04315 PF00581 Rhodanese-like domain NRZ33_04320 PF06004 Bacterial protein of unknown function (DUF903) NRZ33_04325 PF00005 ABC transporter NRZ33_04325 PF00664 ABC transporter transmembrane region NRZ33_04330 PF00561 alpha/beta hydrolase fold NRZ33_04350 PF05547 Immune inhibitor A peptidase M6 NRZ33_04350 PF00801 PKD domain NRZ33_04355 PF06877 Regulator of ribonuclease activity B NRZ33_04360 PF00563 EAL domain NRZ33_04360 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_04360 PF03707 Bacterial signalling protein N terminal repeat NRZ33_04380 PF09905 DNA-binding protein VF530 NRZ33_04385 PF02666 Phosphatidylserine decarboxylase NRZ33_04390 PF03193 RsgA GTPase NRZ33_04395 PF00929 Exonuclease NRZ33_04450 PF00313 'Cold-shock' DNA-binding domain NRZ33_04460 PF00672 HAMP domain NRZ33_04460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_04465 PF00749 tRNA synthetases class I (E and Q), catalytic domain NRZ33_04500 PF06483 Chitinase C NRZ33_04500 PF00704 Glycosyl hydrolases family 18 NRZ33_04515 PF02472 Biopolymer transport protein ExbD/TolR NRZ33_04520 PF01618 MotA/TolQ/ExbB proton channel family NRZ33_04525 PF01618 MotA/TolQ/ExbB proton channel family NRZ33_04535 PF00593 TonB dependent receptor NRZ33_04535 PF07715 TonB-dependent Receptor Plug Domain NRZ33_04540 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_04545 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_04545 PF12911 N-terminal TM domain of oligopeptide transport permease C NRZ33_04555 PF00005 ABC transporter NRZ33_04555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRZ33_04560 PF00005 ABC transporter NRZ33_04560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRZ33_04565 PF01546 Peptidase family M20/M25/M40 NRZ33_04565 PF07687 Peptidase dimerisation domain NRZ33_04570 PF00156 Phosphoribosyl transferase domain NRZ33_04575 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) NRZ33_04580 PF07417 Sigma factor-binding transcriptional regulator Crl NRZ33_04585 PF00696 Amino acid kinase family NRZ33_04585 PF01472 PUA domain NRZ33_04590 PF00171 Aldehyde dehydrogenase family NRZ33_04600 PF00582 Universal stress protein family NRZ33_04625 PF00294 pfkB family carbohydrate kinase NRZ33_04630 PF04227 Indigoidine synthase A like protein NRZ33_04635 PF00194 Eukaryotic-type carbonic anhydrase NRZ33_04640 PF03150 Di-haem cytochrome c peroxidase NRZ33_04640 PF00034 Cytochrome c NRZ33_04675 PF00550 Phosphopantetheine attachment site NRZ33_04680 PF00550 Phosphopantetheine attachment site NRZ33_04690 PF00501 AMP-binding enzyme NRZ33_04690 PF13193 AMP-binding enzyme C-terminal domain NRZ33_04695 PF07977 FabA-like domain NRZ33_04705 PF00221 Aromatic amino acid lyase NRZ33_04730 PF00109 Beta-ketoacyl synthase, N-terminal domain NRZ33_04730 PF02801 Beta-ketoacyl synthase, C-terminal domain NRZ33_04745 PF02801 Beta-ketoacyl synthase, C-terminal domain NRZ33_04745 PF00109 Beta-ketoacyl synthase, N-terminal domain NRZ33_04755 PF00994 Probable molybdopterin binding domain NRZ33_04765 PF06738 Putative threonine/serine exporter NRZ33_04770 PF12821 Threonine/Serine exporter, ThrE NRZ33_04775 PF00186 Dihydrofolate reductase NRZ33_04780 PF00005 ABC transporter NRZ33_04780 PF00571 CBS domain NRZ33_04785 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_04790 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NRZ33_04795 PF01507 Phosphoadenosine phosphosulfate reductase family NRZ33_04800 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NRZ33_04800 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NRZ33_04805 PF00667 FAD binding domain NRZ33_04805 PF00258 Flavodoxin NRZ33_04805 PF00175 Oxidoreductase NAD-binding domain NRZ33_04810 PF02567 Phenazine biosynthesis-like protein NRZ33_04815 PF00152 tRNA synthetases class II (D, K and N) NRZ33_04815 PF01336 OB-fold nucleic acid binding domain NRZ33_04825 PF02743 Cache domain NRZ33_04825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_04825 PF00672 HAMP domain NRZ33_04830 PF03616 Sodium/glutamate symporter NRZ33_04835 PF00710 Asparaginase, N-terminal NRZ33_04835 PF17763 Glutaminase/Asparaginase C-terminal domain NRZ33_04840 PF07023 Protein of unknown function (DUF1315) NRZ33_04845 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NRZ33_04845 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NRZ33_04860 PF01343 Peptidase family S49 NRZ33_04865 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ33_04865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NRZ33_04870 PF00881 Nitroreductase family NRZ33_04875 PF02743 Cache domain NRZ33_04875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_04875 PF00672 HAMP domain NRZ33_04880 PF12464 Maltose acetyltransferase NRZ33_04880 PF14602 Hexapeptide repeat of succinyl-transferase NRZ33_04895 PF08240 Alcohol dehydrogenase GroES-like domain NRZ33_04895 PF00107 Zinc-binding dehydrogenase NRZ33_04900 PF03466 LysR substrate binding domain NRZ33_04900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_04905 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRZ33_04905 PF00367 phosphotransferase system, EIIB NRZ33_04905 PF02378 Phosphotransferase system, EIIC NRZ33_04910 PF00474 Sodium:solute symporter family NRZ33_04920 PF02785 Biotin carboxylase C-terminal domain NRZ33_04920 PF00289 Biotin carboxylase, N-terminal domain NRZ33_04920 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NRZ33_04925 PF00364 Biotin-requiring enzyme NRZ33_04930 PF01220 Dehydroquinase class II NRZ33_04935 PF16177 Acetyl-coenzyme A synthetase N-terminus NRZ33_04935 PF00501 AMP-binding enzyme NRZ33_04935 PF13193 AMP-binding enzyme C-terminal domain NRZ33_04945 PF13188 PAS domain NRZ33_04945 PF03707 Bacterial signalling protein N terminal repeat NRZ33_04945 PF00563 EAL domain NRZ33_04945 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_04965 PF02613 Nitrate reductase delta subunit NRZ33_04980 PF00464 Serine hydroxymethyltransferase NRZ33_04995 PF03477 ATP cone domain NRZ33_05000 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NRZ33_05000 PF01872 RibD C-terminal domain NRZ33_05005 PF00677 Lumazine binding domain NRZ33_05010 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NRZ33_05010 PF00925 GTP cyclohydrolase II NRZ33_05020 PF00885 6,7-dimethyl-8-ribityllumazine synthase NRZ33_05025 PF01029 NusB family NRZ33_05030 PF00586 AIR synthase related protein, N-terminal domain NRZ33_05030 PF02769 AIR synthase related protein, C-terminal domain NRZ33_05035 PF04608 Phosphatidylglycerophosphatase A NRZ33_05040 PF00005 ABC transporter NRZ33_05040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRZ33_05045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ33_05050 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_05055 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_05055 PF12911 N-terminal TM domain of oligopeptide transport permease C NRZ33_05060 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NRZ33_05060 PF02779 Transketolase, pyrimidine binding domain NRZ33_05060 PF02780 Transketolase, C-terminal domain NRZ33_05065 PF00348 Polyprenyl synthetase NRZ33_05070 PF02609 Exonuclease VII small subunit NRZ33_05075 PF01618 MotA/TolQ/ExbB proton channel family NRZ33_05080 PF13677 Membrane MotB of proton-channel complex MotA/MotB NRZ33_05080 PF00691 OmpA family NRZ33_05085 PF01272 Transcription elongation factor, GreA/GreB, C-term NRZ33_05085 PF03449 Transcription elongation factor, N-terminal NRZ33_05095 PF01985 CRS1 / YhbY (CRM) domain NRZ33_05100 PF01728 FtsJ-like methyltransferase NRZ33_05105 PF00004 ATPase family associated with various cellular activities (AAA) NRZ33_05105 PF17862 AAA+ lid domain NRZ33_05105 PF06480 FtsH Extracellular NRZ33_05105 PF01434 Peptidase family M41 NRZ33_05110 PF00809 Pterin binding enzyme NRZ33_05115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NRZ33_05115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NRZ33_05115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NRZ33_05115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NRZ33_05120 PF00121 Triosephosphate isomerase NRZ33_05125 PF03840 Preprotein translocase SecG subunit NRZ33_05140 PF02576 RimP N-terminal domain NRZ33_05140 PF17384 RimP C-terminal SH3 domain NRZ33_05145 PF13184 NusA-like KH domain NRZ33_05145 PF08529 NusA N-terminal domain NRZ33_05145 PF00575 S1 RNA binding domain NRZ33_05150 PF08364 Bacterial translation initiation factor IF-2 associated region NRZ33_05150 PF00009 Elongation factor Tu GTP binding domain NRZ33_05150 PF11987 Translation-initiation factor 2 NRZ33_05150 PF04760 Translation initiation factor IF-2, N-terminal region NRZ33_05155 PF02033 Ribosome-binding factor A NRZ33_05160 PF16198 tRNA pseudouridylate synthase B C-terminal domain NRZ33_05160 PF09157 Pseudouridine synthase II TruB, C-terminal NRZ33_05160 PF01509 TruB family pseudouridylate synthase (N terminal domain) NRZ33_05165 PF00312 Ribosomal protein S15 NRZ33_05170 PF03725 3' exoribonuclease family, domain 2 NRZ33_05170 PF01138 3' exoribonuclease family, domain 1 NRZ33_05170 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NRZ33_05170 PF00013 KH domain NRZ33_05170 PF00575 S1 RNA binding domain NRZ33_05175 PF07690 Major Facilitator Superfamily NRZ33_05180 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_05185 PF02635 DsrE/DsrF-like family NRZ33_05195 PF10415 Fumarase C C-terminus NRZ33_05195 PF00206 Lyase NRZ33_05200 PF03575 Peptidase family S51 NRZ33_05205 PF02554 Carbon starvation protein CstA NRZ33_05205 PF13722 5TM C-terminal transporter carbon starvation CstA NRZ33_05210 PF04397 LytTr DNA-binding domain NRZ33_05210 PF00072 Response regulator receiver domain NRZ33_05215 PF06580 Histidine kinase NRZ33_05215 PF07694 5TMR of 5TMR-LYT NRZ33_05220 PF00196 Bacterial regulatory proteins, luxR family NRZ33_05220 PF00072 Response regulator receiver domain NRZ33_05240 PF13247 4Fe-4S dicluster domain NRZ33_05245 PF03916 Polysulphide reductase, NrfD NRZ33_05250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NRZ33_05250 PF00384 Molybdopterin oxidoreductase NRZ33_05250 PF01568 Molydopterin dinucleotide binding domain NRZ33_05270 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NRZ33_05275 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NRZ33_05280 PF17969 L,D-transpeptidase C-terminal domain NRZ33_05280 PF03734 L,D-transpeptidase catalytic domain NRZ33_05290 PF01523 Putative modulator of DNA gyrase NRZ33_05295 PF01523 Putative modulator of DNA gyrase NRZ33_05300 PF00258 Flavodoxin NRZ33_05305 PF00589 Phage integrase family NRZ33_05305 PF02899 Phage integrase, N-terminal SAM-like domain NRZ33_05310 PF01741 Large-conductance mechanosensitive channel, MscL NRZ33_05315 PF10411 Disulfide bond isomerase protein N-terminus NRZ33_05315 PF13098 Thioredoxin-like domain NRZ33_05320 PF01368 DHH family NRZ33_05320 PF02272 DHHA1 domain NRZ33_05320 PF17768 RecJ OB domain NRZ33_05325 PF13411 MerR HTH family regulatory protein NRZ33_05330 PF00583 Acetyltransferase (GNAT) family NRZ33_05340 PF02508 Rnf-Nqr subunit, membrane protein NRZ33_05345 PF06821 Serine hydrolase NRZ33_05360 PF00665 Integrase core domain NRZ33_05375 PF00145 C-5 cytosine-specific DNA methylase NRZ33_05390 PF03852 DNA mismatch endonuclease Vsr NRZ33_05400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_05400 PF13188 PAS domain NRZ33_05400 PF13426 PAS domain NRZ33_05415 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NRZ33_05415 PF04055 Radical SAM superfamily NRZ33_05420 PF03099 Biotin/lipoate A/B protein ligase family NRZ33_05425 PF04359 Protein of unknown function (DUF493) NRZ33_05430 PF07943 Penicillin-binding protein 5, C-terminal domain NRZ33_05430 PF00768 D-alanyl-D-alanine carboxypeptidase NRZ33_05435 PF03330 Lytic transglycolase NRZ33_05435 PF05036 Sporulation related domain NRZ33_05440 PF13406 Transglycosylase SLT domain NRZ33_05445 PF01098 Cell cycle protein NRZ33_05450 PF03717 Penicillin-binding Protein dimerisation domain NRZ33_05450 PF00905 Penicillin binding protein transpeptidase domain NRZ33_05455 PF02590 Predicted SPOUT methyltransferase NRZ33_05465 PF01467 Cytidylyltransferase-like NRZ33_05480 PF08264 Anticodon-binding domain of tRNA NRZ33_05480 PF00133 tRNA synthetases class I (I, L, M and V) NRZ33_05480 PF13603 Leucyl-tRNA synthetase, Domain 2 NRZ33_05485 PF07295 Zinc-ribbon containing domain NRZ33_05490 PF00795 Carbon-nitrogen hydrolase NRZ33_05495 PF03471 Transporter associated domain NRZ33_05495 PF00571 CBS domain NRZ33_05500 PF02130 Uncharacterized protein family UPF0054 NRZ33_05505 PF02562 PhoH-like protein NRZ33_05510 PF01938 TRAM domain NRZ33_05510 PF00919 Uncharacterized protein family UPF0004 NRZ33_05510 PF04055 Radical SAM superfamily NRZ33_05515 PF01494 FAD binding domain NRZ33_05520 PF00857 Isochorismatase family NRZ33_05530 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_05530 PF05230 MASE2 domain NRZ33_05535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_05535 PF03466 LysR substrate binding domain NRZ33_05545 PF13419 Haloacid dehalogenase-like hydrolase NRZ33_05555 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_05565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRZ33_05565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRZ33_05575 PF09997 Predicted membrane protein (DUF2238) NRZ33_05580 PF09285 Elongation factor P, C-terminal NRZ33_05580 PF08207 Elongation factor P (EF-P) KOW-like domain NRZ33_05580 PF01132 Elongation factor P (EF-P) OB domain NRZ33_05590 PF00478 IMP dehydrogenase / GMP reductase domain NRZ33_05600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_05600 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_05600 PF08521 Two-component sensor kinase N-terminal NRZ33_05605 PF00486 Transcriptional regulatory protein, C terminal NRZ33_05605 PF00072 Response regulator receiver domain NRZ33_05625 PF00501 AMP-binding enzyme NRZ33_05640 PF06224 Winged helix DNA-binding domain NRZ33_05660 PF02313 Fumarate reductase subunit D NRZ33_05665 PF02300 Fumarate reductase subunit C NRZ33_05670 PF13183 4Fe-4S dicluster domain NRZ33_05670 PF13085 2Fe-2S iron-sulfur cluster binding domain NRZ33_05675 PF00890 FAD binding domain NRZ33_05675 PF02910 Fumarate reductase flavoprotein C-term NRZ33_05680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_05680 PF02743 Cache domain NRZ33_05680 PF00672 HAMP domain NRZ33_05685 PF03009 Glycerophosphoryl diester phosphodiesterase family NRZ33_05690 PF00924 Mechanosensitive ion channel NRZ33_05690 PF12795 Mechanosensitive ion channel porin domain NRZ33_05690 PF12794 Mechanosensitive ion channel inner membrane domain 1 NRZ33_05700 PF01476 LysM domain NRZ33_05700 PF08525 Opacity-associated protein A N-terminal motif NRZ33_05700 PF01551 Peptidase family M23 NRZ33_05715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_05715 PF03466 LysR substrate binding domain NRZ33_05730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_05730 PF00672 HAMP domain NRZ33_05730 PF16591 Helical bimodular sensor domain NRZ33_05735 PF03466 LysR substrate binding domain NRZ33_05735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_05740 PF17092 Penicillin-binding protein OB-like domain NRZ33_05740 PF00905 Penicillin binding protein transpeptidase domain NRZ33_05740 PF00912 Transglycosylase NRZ33_05745 PF11104 Type IV pilus assembly protein PilM; NRZ33_05755 PF04350 Pilus assembly protein, PilO NRZ33_05765 PF07660 Secretin and TonB N terminus short domain NRZ33_05765 PF03958 Bacterial type II/III secretion system short domain NRZ33_05765 PF11741 AMIN domain NRZ33_05765 PF00263 Bacterial type II and III secretion system protein NRZ33_05770 PF01202 Shikimate kinase NRZ33_05775 PF01761 3-dehydroquinate synthase NRZ33_05785 PF02086 D12 class N6 adenine-specific DNA methyltransferase NRZ33_05795 PF00834 Ribulose-phosphate 3 epimerase family NRZ33_05800 PF13419 Haloacid dehalogenase-like hydrolase NRZ33_05805 PF00579 tRNA synthetases class I (W and Y) NRZ33_05815 PF00117 Glutamine amidotransferase class-I NRZ33_05820 PF00202 Aminotransferase class-III NRZ33_05825 PF04958 Arginine N-succinyltransferase beta subunit NRZ33_05830 PF00171 Aldehyde dehydrogenase family NRZ33_05840 PF13419 Haloacid dehalogenase-like hydrolase NRZ33_05845 PF07690 Major Facilitator Superfamily NRZ33_05850 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NRZ33_05850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRZ33_05850 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NRZ33_05850 PF10371 Domain of unknown function NRZ33_05850 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NRZ33_05860 PF00128 Alpha amylase, catalytic domain NRZ33_05860 PF16657 Maltogenic Amylase, C-terminal domain NRZ33_05870 PF04266 ASCH domain NRZ33_05880 PF01048 Phosphorylase superfamily NRZ33_05885 PF04973 Nicotinamide mononucleotide transporter NRZ33_05890 PF03600 Citrate transporter NRZ33_05890 PF02080 TrkA-C domain NRZ33_05935 PF06071 Protein of unknown function (DUF933) NRZ33_05935 PF01926 50S ribosome-binding GTPase NRZ33_05940 PF01195 Peptidyl-tRNA hydrolase NRZ33_05945 PF02872 5'-nucleotidase, C-terminal domain NRZ33_05945 PF00149 Calcineurin-like phosphoesterase NRZ33_05950 PF14572 Phosphoribosyl synthetase-associated domain NRZ33_05950 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NRZ33_05960 PF08544 GHMP kinases C terminal NRZ33_05960 PF00288 GHMP kinases N terminal domain NRZ33_05965 PF03550 Outer membrane lipoprotein LolB NRZ33_05970 PF01488 Shikimate / quinate 5-dehydrogenase NRZ33_05970 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NRZ33_05970 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NRZ33_05975 PF00472 RF-1 domain NRZ33_05975 PF03462 PCRF domain NRZ33_05980 PF13847 Methyltransferase domain NRZ33_05980 PF17827 PrmC N-terminal domain NRZ33_05990 PF13369 Transglutaminase-like superfamily NRZ33_05995 PF00793 DAHP synthetase I family NRZ33_06000 PF00375 Sodium:dicarboxylate symporter family NRZ33_06005 PF01228 Glycine radical NRZ33_06010 PF03167 Uracil DNA glycosylase superfamily NRZ33_06025 PF00923 Transaldolase/Fructose-6-phosphate aldolase NRZ33_06030 PF01235 Sodium:alanine symporter family NRZ33_06035 PF11992 Domain of unknown function (DUF3488) NRZ33_06035 PF13559 Domain of unknown function (DUF4129) NRZ33_06035 PF01841 Transglutaminase-like superfamily NRZ33_06045 PF17863 AAA lid domain NRZ33_06045 PF07726 ATPase family associated with various cellular activities (AAA) NRZ33_06050 PF00144 Beta-lactamase NRZ33_06055 PF00854 POT family NRZ33_06060 PF03652 Holliday junction resolvase NRZ33_06065 PF02622 Uncharacterized ACR, COG1678 NRZ33_06070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_06070 PF00672 HAMP domain NRZ33_06070 PF12729 Four helix bundle sensory module for signal transduction NRZ33_06075 PF00672 HAMP domain NRZ33_06075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_06080 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NRZ33_06080 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NRZ33_06085 PF04452 RNA methyltransferase NRZ33_06090 PF04231 Endonuclease I NRZ33_06095 PF17283 SprT-like zinc ribbon domain NRZ33_06095 PF10263 SprT-like family NRZ33_06100 PF02773 S-adenosylmethionine synthetase, C-terminal domain NRZ33_06100 PF00438 S-adenosylmethionine synthetase, N-terminal domain NRZ33_06100 PF02772 S-adenosylmethionine synthetase, central domain NRZ33_06105 PF00456 Transketolase, thiamine diphosphate binding domain NRZ33_06105 PF02779 Transketolase, pyrimidine binding domain NRZ33_06105 PF02780 Transketolase, C-terminal domain NRZ33_06115 PF01042 Endoribonuclease L-PSP NRZ33_06120 PF01965 DJ-1/PfpI family NRZ33_06125 PF03702 Anhydro-N-acetylmuramic acid kinase NRZ33_06130 PF01551 Peptidase family M23 NRZ33_06130 PF08525 Opacity-associated protein A N-terminal motif NRZ33_06130 PF01476 LysM domain NRZ33_06135 PF00579 tRNA synthetases class I (W and Y) NRZ33_06140 PF01204 Trehalase NRZ33_06150 PF01161 Phosphatidylethanolamine-binding protein NRZ33_06155 PF00709 Adenylosuccinate synthetase NRZ33_06160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_06160 PF03466 LysR substrate binding domain NRZ33_06170 PF00155 Aminotransferase class I and II NRZ33_06175 PF07690 Major Facilitator Superfamily NRZ33_06180 PF03466 LysR substrate binding domain NRZ33_06180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_06185 PF00106 short chain dehydrogenase NRZ33_06190 PF01343 Peptidase family S49 NRZ33_06190 PF08496 Peptidase family S49 N-terminal NRZ33_06195 PF04996 Succinylarginine dihydrolase NRZ33_06200 PF08272 Topoisomerase I zinc-ribbon-like NRZ33_06200 PF01131 DNA topoisomerase NRZ33_06200 PF01751 Toprim domain NRZ33_06200 PF01396 Topoisomerase DNA binding C4 zinc finger NRZ33_06215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_06215 PF08447 PAS fold NRZ33_06220 PF00728 Glycosyl hydrolase family 20, catalytic domain NRZ33_06220 PF02838 Glycosyl hydrolase family 20, domain 2 NRZ33_06225 PF01869 BadF/BadG/BcrA/BcrD ATPase family NRZ33_06235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRZ33_06235 PF00005 ABC transporter NRZ33_06240 PF00005 ABC transporter NRZ33_06240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRZ33_06245 PF12911 N-terminal TM domain of oligopeptide transport permease C NRZ33_06245 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_06250 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_06255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ33_06260 PF09308 LuxQ, periplasmic NRZ33_06260 PF00072 Response regulator receiver domain NRZ33_06260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_06260 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_06280 PF10725 Protein of unknown function (DUF2517) NRZ33_06290 PF05114 Protein of unknown function (DUF692) NRZ33_06315 PF13426 PAS domain NRZ33_06315 PF08447 PAS fold NRZ33_06315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_06330 PF04632 Fusaric acid resistance protein family NRZ33_06335 PF00994 Probable molybdopterin binding domain NRZ33_06335 PF03454 MoeA C-terminal region (domain IV) NRZ33_06335 PF03453 MoeA N-terminal region (domain I and II) NRZ33_06340 PF12804 MobA-like NTP transferase domain NRZ33_06345 PF00005 ABC transporter NRZ33_06350 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_06355 PF12849 PBP superfamily domain NRZ33_06360 PF00072 Response regulator receiver domain NRZ33_06360 PF00158 Sigma-54 interaction domain NRZ33_06360 PF02954 Bacterial regulatory protein, Fis family NRZ33_06365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_06365 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_06365 PF00989 PAS fold NRZ33_06370 PF12728 Helix-turn-helix domain NRZ33_06370 PF12727 PBP superfamily domain NRZ33_06375 PF02634 FdhD/NarQ family NRZ33_06380 PF00004 ATPase family associated with various cellular activities (AAA) NRZ33_06380 PF17866 AAA lid domain NRZ33_06410 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NRZ33_06410 PF01568 Molydopterin dinucleotide binding domain NRZ33_06410 PF00384 Molybdopterin oxidoreductase NRZ33_06410 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NRZ33_06410 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NRZ33_06410 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NRZ33_06410 PF01568 Molydopterin dinucleotide binding domain NRZ33_06410 PF00384 Molybdopterin oxidoreductase NRZ33_06410 PF12838 4Fe-4S dicluster domain NRZ33_06410 PF12838 4Fe-4S dicluster domain NRZ33_06415 PF13247 4Fe-4S dicluster domain NRZ33_06425 PF00072 Response regulator receiver domain NRZ33_06430 PF03949 Malic enzyme, NAD binding domain NRZ33_06430 PF00390 Malic enzyme, N-terminal domain NRZ33_06435 PF16998 17 kDa outer membrane surface antigen NRZ33_06435 PF05433 Glycine zipper 2TM domain NRZ33_06440 PF01458 Uncharacterized protein family (UPF0051) NRZ33_06445 PF00860 Permease family NRZ33_06450 PF10282 Lactonase, 7-bladed beta-propeller NRZ33_06460 PF12794 Mechanosensitive ion channel inner membrane domain 1 NRZ33_06460 PF00924 Mechanosensitive ion channel NRZ33_06460 PF12795 Mechanosensitive ion channel porin domain NRZ33_06465 PF00224 Pyruvate kinase, barrel domain NRZ33_06465 PF02887 Pyruvate kinase, alpha/beta domain NRZ33_06475 PF04389 Peptidase family M28 NRZ33_06475 PF04151 Bacterial pre-peptidase C-terminal domain NRZ33_06480 PF00999 Sodium/hydrogen exchanger family NRZ33_06480 PF02254 TrkA-N domain NRZ33_06490 PF04381 Putative exonuclease, RdgC NRZ33_06500 PF00149 Calcineurin-like phosphoesterase NRZ33_06500 PF12320 Type 5 capsule protein repressor C-terminal domain NRZ33_06505 PF13476 AAA domain NRZ33_06515 PF01292 Prokaryotic cytochrome b561 NRZ33_06525 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_06530 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRZ33_06535 PF02896 PEP-utilising enzyme, TIM barrel domain NRZ33_06535 PF05524 PEP-utilising enzyme, N-terminal NRZ33_06535 PF00391 PEP-utilising enzyme, mobile domain NRZ33_06540 PF00381 PTS HPr component phosphorylation site NRZ33_06545 PF00291 Pyridoxal-phosphate dependent enzyme NRZ33_06550 PF00004 ATPase family associated with various cellular activities (AAA) NRZ33_06550 PF07724 AAA domain (Cdc48 subfamily) NRZ33_06550 PF17871 AAA lid domain NRZ33_06550 PF02861 Clp amino terminal domain, pathogenicity island component NRZ33_06550 PF10431 C-terminal, D2-small domain, of ClpB protein NRZ33_06560 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NRZ33_06560 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NRZ33_06565 PF00672 HAMP domain NRZ33_06565 PF01966 HD domain NRZ33_06570 PF18389 TrmO C-terminal domain NRZ33_06570 PF01980 tRNA-methyltransferase O NRZ33_06590 PF00664 ABC transporter transmembrane region NRZ33_06590 PF00005 ABC transporter NRZ33_06595 PF00664 ABC transporter transmembrane region NRZ33_06595 PF00005 ABC transporter NRZ33_06610 PF00486 Transcriptional regulatory protein, C terminal NRZ33_06610 PF00072 Response regulator receiver domain NRZ33_06620 PF03737 Aldolase/RraA NRZ33_06635 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) NRZ33_06640 PF00588 SpoU rRNA Methylase family NRZ33_06645 PF13840 ACT domain NRZ33_06645 PF03447 Homoserine dehydrogenase, NAD binding domain NRZ33_06645 PF00742 Homoserine dehydrogenase NRZ33_06645 PF00696 Amino acid kinase family NRZ33_06645 PF01842 ACT domain NRZ33_06650 PF08544 GHMP kinases C terminal NRZ33_06650 PF00288 GHMP kinases N terminal domain NRZ33_06655 PF14821 Threonine synthase N terminus NRZ33_06655 PF00291 Pyridoxal-phosphate dependent enzyme NRZ33_06660 PF13474 SnoaL-like domain NRZ33_06675 PF00005 ABC transporter NRZ33_06675 PF12848 ABC transporter NRZ33_06690 PF01048 Phosphorylase superfamily NRZ33_06705 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_06705 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ33_06705 PF00989 PAS fold NRZ33_06705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_06705 PF00072 Response regulator receiver domain NRZ33_06705 PF01627 Hpt domain NRZ33_06710 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NRZ33_06715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRZ33_06715 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NRZ33_06720 PF02690 Na+/Pi-cotransporter NRZ33_06730 PF13520 Amino acid permease NRZ33_06740 PF00324 Amino acid permease NRZ33_06750 PF00202 Aminotransferase class-III NRZ33_06755 PF00171 Aldehyde dehydrogenase family NRZ33_06760 PF07883 Cupin domain NRZ33_06760 PF01381 Helix-turn-helix NRZ33_06765 PF01266 FAD dependent oxidoreductase NRZ33_06790 PF00816 H-NS histone family NRZ33_06795 PF00793 DAHP synthetase I family NRZ33_06800 PF04954 Siderophore-interacting protein NRZ33_06800 PF08021 Siderophore-interacting FAD-binding domain NRZ33_06805 PF02321 Outer membrane efflux protein NRZ33_06810 PF00005 ABC transporter NRZ33_06810 PF02687 FtsX-like permease family NRZ33_06810 PF12704 MacB-like periplasmic core domain NRZ33_06815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ33_06825 PF02833 DHHA2 domain NRZ33_06825 PF01368 DHH family NRZ33_06830 PF02463 RecF/RecN/SMC N terminal domain NRZ33_06835 PF01513 ATP-NAD kinase NRZ33_06840 PF01025 GrpE NRZ33_06845 PF00012 Hsp70 protein NRZ33_06850 PF00226 DnaJ domain NRZ33_06850 PF01556 DnaJ C terminal domain NRZ33_06850 PF00684 DnaJ central domain NRZ33_06855 PF02264 LamB porin NRZ33_06855 PF11471 Maltoporin periplasmic N-terminal extension NRZ33_06860 PF00294 pfkB family carbohydrate kinase NRZ33_06865 PF00367 phosphotransferase system, EIIB NRZ33_06865 PF02378 Phosphotransferase system, EIIC NRZ33_06870 PF08244 Glycosyl hydrolases family 32 C terminal NRZ33_06870 PF00251 Glycosyl hydrolases family 32 N-terminal domain NRZ33_06875 PF13407 Periplasmic binding protein domain NRZ33_06875 PF00356 Bacterial regulatory proteins, lacI family NRZ33_06880 PF02308 MgtC family NRZ33_06890 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ33_06905 PF04143 Sulphur transport NRZ33_06920 PF00873 AcrB/AcrD/AcrF family NRZ33_06925 PF00563 EAL domain NRZ33_06925 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_06925 PF03707 Bacterial signalling protein N terminal repeat NRZ33_06930 PF03099 Biotin/lipoate A/B protein ligase family NRZ33_06930 PF10437 Bacterial lipoate protein ligase C-terminus NRZ33_06950 PF00873 AcrB/AcrD/AcrF family NRZ33_06955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ33_06955 PF00529 HlyD membrane-fusion protein of T1SS NRZ33_06965 PF00873 AcrB/AcrD/AcrF family NRZ33_06970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ33_06975 PF03372 Endonuclease/Exonuclease/phosphatase family NRZ33_06990 PF07690 Major Facilitator Superfamily NRZ33_06995 PF02424 ApbE family NRZ33_07000 PF00127 Copper binding proteins, plastocyanin/azurin family NRZ33_07015 PF01156 Inosine-uridine preferring nucleoside hydrolase NRZ33_07025 PF00034 Cytochrome c NRZ33_07025 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NRZ33_07035 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NRZ33_07035 PF06481 COX Aromatic Rich Motif NRZ33_07040 PF00115 Cytochrome C and Quinol oxidase polypeptide I NRZ33_07045 PF00510 Cytochrome c oxidase subunit III NRZ33_07050 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NRZ33_07055 PF01040 UbiA prenyltransferase family NRZ33_07060 PF07690 Major Facilitator Superfamily NRZ33_07070 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NRZ33_07075 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_07080 PF00005 ABC transporter NRZ33_07085 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NRZ33_07095 PF07670 Nucleoside recognition NRZ33_07095 PF07662 Na+ dependent nucleoside transporter C-terminus NRZ33_07095 PF01773 Na+ dependent nucleoside transporter N-terminus NRZ33_07115 PF04307 LexA-binding, inner membrane-associated putative hydrolase NRZ33_07140 PF00290 Tryptophan synthase alpha chain NRZ33_07145 PF00291 Pyridoxal-phosphate dependent enzyme NRZ33_07150 PF00218 Indole-3-glycerol phosphate synthase NRZ33_07150 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NRZ33_07155 PF02885 Glycosyl transferase family, helical bundle domain NRZ33_07155 PF00591 Glycosyl transferase family, a/b domain NRZ33_07160 PF00117 Glutamine amidotransferase class-I NRZ33_07160 PF02885 Glycosyl transferase family, helical bundle domain NRZ33_07160 PF00591 Glycosyl transferase family, a/b domain NRZ33_07165 PF04715 Anthranilate synthase component I, N terminal region NRZ33_07165 PF00425 chorismate binding enzyme NRZ33_07170 PF02811 PHP domain NRZ33_07175 PF01300 Telomere recombination NRZ33_07180 PF02616 Segregation and condensation protein ScpA NRZ33_07185 PF04079 Segregation and condensation complex subunit ScpB NRZ33_07190 PF00849 RNA pseudouridylate synthase NRZ33_07190 PF01479 S4 domain NRZ33_07210 PF08361 MAATS-type transcriptional repressor, C-terminal region NRZ33_07210 PF00440 Bacterial regulatory proteins, tetR family NRZ33_07215 PF00529 HlyD membrane-fusion protein of T1SS NRZ33_07215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ33_07220 PF00873 AcrB/AcrD/AcrF family NRZ33_07225 PF02321 Outer membrane efflux protein NRZ33_07230 PF16363 GDP-mannose 4,6 dehydratase NRZ33_07235 PF04321 RmlD substrate binding domain NRZ33_07240 PF00483 Nucleotidyl transferase NRZ33_07245 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NRZ33_07250 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NRZ33_07255 PF13508 Acetyltransferase (GNAT) domain NRZ33_07255 PF00583 Acetyltransferase (GNAT) family NRZ33_07260 PF01061 ABC-2 type transporter NRZ33_07265 PF14524 Wzt C-terminal domain NRZ33_07265 PF00005 ABC transporter NRZ33_07270 PF00535 Glycosyl transferase family 2 NRZ33_07275 PF01209 ubiE/COQ5 methyltransferase family NRZ33_07295 PF01370 NAD dependent epimerase/dehydratase family NRZ33_07300 PF00953 Glycosyl transferase family 4 NRZ33_07305 PF02719 Polysaccharide biosynthesis protein NRZ33_07315 PF00480 ROK family NRZ33_07315 PF01047 MarR family NRZ33_07320 PF01979 Amidohydrolase family NRZ33_07325 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NRZ33_07330 PF02378 Phosphotransferase system, EIIC NRZ33_07330 PF00367 phosphotransferase system, EIIB NRZ33_07330 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRZ33_07335 PF03173 Putative carbohydrate binding domain NRZ33_07335 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain NRZ33_07335 PF00728 Glycosyl hydrolase family 20, catalytic domain NRZ33_07335 PF02838 Glycosyl hydrolase family 20, domain 2 NRZ33_07340 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NRZ33_07340 PF00749 tRNA synthetases class I (E and Q), catalytic domain NRZ33_07345 PF01475 Ferric uptake regulator family NRZ33_07355 PF00258 Flavodoxin NRZ33_07360 PF01402 Ribbon-helix-helix protein, copG family NRZ33_07370 PF12697 Alpha/beta hydrolase family NRZ33_07375 PF17206 SeqA protein N-terminal domain NRZ33_07375 PF03925 SeqA protein C-terminal domain NRZ33_07380 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NRZ33_07380 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NRZ33_07380 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NRZ33_07380 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NRZ33_07390 PF01047 MarR family NRZ33_07395 PF13406 Transglycosylase SLT domain NRZ33_07400 PF01066 CDP-alcohol phosphatidyltransferase NRZ33_07405 PF00005 ABC transporter NRZ33_07415 PF13416 Bacterial extracellular solute-binding protein NRZ33_07420 PF00403 Heavy-metal-associated domain NRZ33_07420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRZ33_07420 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ33_07425 PF02627 Carboxymuconolactone decarboxylase family NRZ33_07435 PF01625 Peptide methionine sulfoxide reductase NRZ33_07450 PF01103 Surface antigen NRZ33_07450 PF07244 Surface antigen variable number repeat NRZ33_07450 PF17243 POTRA domain TamA domain 1 NRZ33_07455 PF04357 TamB, inner membrane protein subunit of TAM complex NRZ33_07475 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NRZ33_07480 PF00563 EAL domain NRZ33_07480 PF03707 Bacterial signalling protein N terminal repeat NRZ33_07480 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_07485 PF01464 Transglycosylase SLT domain NRZ33_07485 PF14718 Soluble lytic murein transglycosylase L domain NRZ33_07490 PF00356 Bacterial regulatory proteins, lacI family NRZ33_07500 PF03061 Thioesterase superfamily NRZ33_07510 PF03372 Endonuclease/Exonuclease/phosphatase family NRZ33_07515 PF01476 LysM domain NRZ33_07515 PF01464 Transglycosylase SLT domain NRZ33_07520 PF16123 Hydroxyacylglutathione hydrolase C-terminus NRZ33_07520 PF00753 Metallo-beta-lactamase superfamily NRZ33_07525 PF08241 Methyltransferase domain NRZ33_07530 PF00075 RNase H NRZ33_07535 PF00929 Exonuclease NRZ33_07545 PF11849 Domain of unknown function (DUF3369) NRZ33_07550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRZ33_07550 PF02770 Acyl-CoA dehydrogenase, middle domain NRZ33_07550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRZ33_07550 PF09317 Domain of unknown function (DUF1974) NRZ33_07555 PF13580 SIS domain NRZ33_07560 PF13230 Glutamine amidotransferases class-II NRZ33_07570 PF01933 Uncharacterised protein family UPF0052 NRZ33_07580 PF00072 Response regulator receiver domain NRZ33_07580 PF01627 Hpt domain NRZ33_07580 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_07580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_07580 PF00672 HAMP domain NRZ33_07580 PF17149 Periplasmic sensor domain found in signal transduction proteins NRZ33_07590 PF00196 Bacterial regulatory proteins, luxR family NRZ33_07590 PF00072 Response regulator receiver domain NRZ33_07595 PF00672 HAMP domain NRZ33_07595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_07595 PF07730 Histidine kinase NRZ33_07595 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NRZ33_07600 PF04055 Radical SAM superfamily NRZ33_07600 PF06463 Molybdenum Cofactor Synthesis C NRZ33_07605 PF13187 4Fe-4S dicluster domain NRZ33_07605 PF12800 4Fe-4S binding domain NRZ33_07605 PF00037 4Fe-4S binding domain NRZ33_07615 PF00384 Molybdopterin oxidoreductase NRZ33_07615 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NRZ33_07615 PF01568 Molydopterin dinucleotide binding domain NRZ33_07615 PF10518 TAT (twin-arginine translocation) pathway signal sequence NRZ33_07620 PF12800 4Fe-4S binding domain NRZ33_07620 PF12838 4Fe-4S dicluster domain NRZ33_07625 PF12801 4Fe-4S binding domain NRZ33_07625 PF13237 4Fe-4S dicluster domain NRZ33_07630 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) NRZ33_07635 PF03264 NapC/NirT cytochrome c family, N-terminal region NRZ33_07640 PF00994 Probable molybdopterin binding domain NRZ33_07645 PF01967 MoaC family NRZ33_07650 PF02597 ThiS family NRZ33_07655 PF02391 MoaE protein NRZ33_07665 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_07670 PF00005 ABC transporter NRZ33_07670 PF03459 TOBE domain NRZ33_07675 PF00561 alpha/beta hydrolase fold NRZ33_07680 PF00899 ThiF family NRZ33_07685 PF00994 Probable molybdopterin binding domain NRZ33_07685 PF03454 MoeA C-terminal region (domain IV) NRZ33_07685 PF03453 MoeA N-terminal region (domain I and II) NRZ33_07690 PF01227 GTP cyclohydrolase I NRZ33_07695 PF00672 HAMP domain NRZ33_07695 PF17200 Single Cache domain 2 NRZ33_07695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_07700 PF01268 Formate--tetrahydrofolate ligase NRZ33_07710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_07710 PF03466 LysR substrate binding domain NRZ33_07715 PF04264 YceI-like domain NRZ33_07740 PF01546 Peptidase family M20/M25/M40 NRZ33_07740 PF07687 Peptidase dimerisation domain NRZ33_07755 PF17944 Arginine decarboxylase C-terminal helical extension NRZ33_07755 PF17810 Arginine decarboxylase helical bundle domain NRZ33_07755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NRZ33_07770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_07770 PF00672 HAMP domain NRZ33_07780 PF01042 Endoribonuclease L-PSP NRZ33_07785 PF03313 Serine dehydratase alpha chain NRZ33_07790 PF13309 HTH domain NRZ33_07790 PF08348 YheO-like PAS domain NRZ33_07795 PF00300 Histidine phosphatase superfamily (branch 1) NRZ33_07800 PF01844 HNH endonuclease NRZ33_07820 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NRZ33_07820 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NRZ33_07825 PF00849 RNA pseudouridylate synthase NRZ33_07825 PF01479 S4 domain NRZ33_07830 PF09101 Exotoxin A binding NRZ33_07830 PF09009 Exotoxin A catalytic NRZ33_07830 PF09102 Exotoxin A, targeting NRZ33_07835 PF07690 Major Facilitator Superfamily NRZ33_07845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_07845 PF03466 LysR substrate binding domain NRZ33_07850 PF07690 Major Facilitator Superfamily NRZ33_07860 PF10689 Protein of unknown function (DUF2496) NRZ33_07875 PF04391 Protein of unknown function (DUF533) NRZ33_07885 PF00155 Aminotransferase class I and II NRZ33_07885 PF00392 Bacterial regulatory proteins, gntR family NRZ33_07890 PF01654 Cytochrome bd terminal oxidase subunit I NRZ33_07895 PF02322 Cytochrome bd terminal oxidase subunit II NRZ33_07905 PF07690 Major Facilitator Superfamily NRZ33_07910 PF00248 Aldo/keto reductase family NRZ33_07935 PF03466 LysR substrate binding domain NRZ33_07935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_07940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NRZ33_07940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NRZ33_07945 PF00230 Major intrinsic protein NRZ33_07950 PF07690 Major Facilitator Superfamily NRZ33_07955 PF00455 DeoR C terminal sensor domain NRZ33_07955 PF08220 DeoR-like helix-turn-helix domain NRZ33_07965 PF01266 FAD dependent oxidoreductase NRZ33_07965 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NRZ33_07970 PF03009 Glycerophosphoryl diester phosphodiesterase family NRZ33_07975 PF00793 DAHP synthetase I family NRZ33_07980 PF01817 Chorismate mutase type II NRZ33_07980 PF02153 Prephenate dehydrogenase NRZ33_07985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_07985 PF03466 LysR substrate binding domain NRZ33_07990 PF04219 Protein of unknown function, DUF NRZ33_07995 PF03974 Ecotin NRZ33_08015 PF00326 Prolyl oligopeptidase family NRZ33_08015 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NRZ33_08020 PF00593 TonB dependent receptor NRZ33_08020 PF07715 TonB-dependent Receptor Plug Domain NRZ33_08025 PF00884 Sulfatase NRZ33_08025 PF11893 Domain of unknown function (DUF3413) NRZ33_08030 PF07208 Protein of unknown function (DUF1414) NRZ33_08035 PF04245 37-kD nucleoid-associated bacterial protein NRZ33_08040 PF01547 Bacterial extracellular solute-binding protein NRZ33_08045 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_08045 PF14785 Maltose transport system permease protein MalF P2 domain NRZ33_08050 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_08055 PF00005 ABC transporter NRZ33_08055 PF08402 TOBE domain NRZ33_08060 PF03976 Polyphosphate kinase 2 (PPK2) NRZ33_08065 PF00561 alpha/beta hydrolase fold NRZ33_08075 PF01594 AI-2E family transporter NRZ33_08080 PF01206 Sulfurtransferase TusA NRZ33_08085 PF01435 Peptidase family M48 NRZ33_08085 PF13181 Tetratricopeptide repeat NRZ33_08090 PF00578 AhpC/TSA family NRZ33_08095 PF03960 ArsC family NRZ33_08110 PF04336 Acyl carrier protein phosphodiesterase NRZ33_08120 PF03956 Lysine exporter LysO NRZ33_08125 PF00005 ABC transporter NRZ33_08130 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ33_08135 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_08140 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_08150 PF04055 Radical SAM superfamily NRZ33_08155 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_08155 PF03707 Bacterial signalling protein N terminal repeat NRZ33_08155 PF00563 EAL domain NRZ33_08160 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ33_08160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRZ33_08165 PF07678 A-macroglobulin TED domain NRZ33_08165 PF01835 MG2 domain NRZ33_08165 PF17962 Bacterial macroglobulin domain 6 NRZ33_08165 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain NRZ33_08165 PF00207 Alpha-2-macroglobulin family NRZ33_08165 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain NRZ33_08165 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain NRZ33_08165 PF07703 Alpha-2-macroglobulin bait region domain NRZ33_08165 PF11974 Bacterial alpha-2-macroglobulin MG3 domain NRZ33_08170 PF00912 Transglycosylase NRZ33_08170 PF00905 Penicillin binding protein transpeptidase domain NRZ33_08170 PF06832 Penicillin-Binding Protein C-terminus Family NRZ33_08180 PF02926 THUMP domain NRZ33_08180 PF02568 Thiamine biosynthesis protein (ThiI) NRZ33_08190 PF03458 UPF0126 domain NRZ33_08195 PF00669 Bacterial flagellin N-terminal helical region NRZ33_08195 PF00700 Bacterial flagellin C-terminal helical region NRZ33_08200 PF00669 Bacterial flagellin N-terminal helical region NRZ33_08200 PF07196 Flagellin hook IN motif NRZ33_08200 PF00700 Bacterial flagellin C-terminal helical region NRZ33_08210 PF07195 Flagellar hook-associated protein 2 C-terminus NRZ33_08210 PF02465 Flagellar hook-associated protein 2 N-terminus NRZ33_08210 PF07196 Flagellin hook IN motif NRZ33_08215 PF02561 Flagellar protein FliS NRZ33_08230 PF01497 Periplasmic binding protein NRZ33_08240 PF01048 Phosphorylase superfamily NRZ33_08250 PF02535 ZIP Zinc transporter NRZ33_08255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_08255 PF00672 HAMP domain NRZ33_08255 PF12729 Four helix bundle sensory module for signal transduction NRZ33_08260 PF00459 Inositol monophosphatase family NRZ33_08270 PF00043 Glutathione S-transferase, C-terminal domain NRZ33_08270 PF02798 Glutathione S-transferase, N-terminal domain NRZ33_08275 PF07690 Major Facilitator Superfamily NRZ33_08285 PF05164 Cell division protein ZapA NRZ33_08290 PF03695 Uncharacterised protein family (UPF0149) NRZ33_08295 PF01494 FAD binding domain NRZ33_08300 PF01494 FAD binding domain NRZ33_08305 PF08669 Glycine cleavage T-protein C-terminal barrel domain NRZ33_08305 PF01571 Aminomethyltransferase folate-binding domain NRZ33_08310 PF01597 Glycine cleavage H-protein NRZ33_08315 PF02347 Glycine cleavage system P-protein NRZ33_08320 PF01022 Bacterial regulatory protein, arsR family NRZ33_08325 PF01758 Sodium Bile acid symporter family NRZ33_08330 PF03960 ArsC family NRZ33_08335 PF08241 Methyltransferase domain NRZ33_08345 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_08345 PF00989 PAS fold NRZ33_08345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_08350 PF07690 Major Facilitator Superfamily NRZ33_08355 PF13192 Thioredoxin domain NRZ33_08355 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ33_08360 PF00578 AhpC/TSA family NRZ33_08360 PF10417 C-terminal domain of 1-Cys peroxiredoxin NRZ33_08365 PF00571 CBS domain NRZ33_08370 PF02547 Queuosine biosynthesis protein NRZ33_08375 PF01702 Queuine tRNA-ribosyltransferase NRZ33_08380 PF02699 Preprotein translocase subunit NRZ33_08385 PF13721 SecD export protein N-terminal TM region NRZ33_08385 PF07549 SecD/SecF GG Motif NRZ33_08385 PF02355 Protein export membrane protein NRZ33_08390 PF02355 Protein export membrane protein NRZ33_08390 PF07549 SecD/SecF GG Motif NRZ33_08395 PF00581 Rhodanese-like domain NRZ33_08400 PF13181 Tetratricopeptide repeat NRZ33_08400 PF07719 Tetratricopeptide repeat NRZ33_08405 PF01136 Peptidase family U32 NRZ33_08410 PF01136 Peptidase family U32 NRZ33_08415 PF02036 SCP-2 sterol transfer family NRZ33_08425 PF00588 SpoU rRNA Methylase family NRZ33_08430 PF02082 Transcriptional regulator NRZ33_08435 PF00266 Aminotransferase class-V NRZ33_08440 PF01592 NifU-like N terminal domain NRZ33_08445 PF01521 Iron-sulphur cluster biosynthesis NRZ33_08450 PF07743 HSCB C-terminal oligomerisation domain NRZ33_08455 PF00012 Hsp70 protein NRZ33_08460 PF00111 2Fe-2S iron-sulfur cluster binding domain NRZ33_08465 PF12404 Peptidase NRZ33_08465 PF00883 Cytosol aminopeptidase family, catalytic domain NRZ33_08470 PF12404 Peptidase NRZ33_08470 PF00883 Cytosol aminopeptidase family, catalytic domain NRZ33_08475 PF00334 Nucleoside diphosphate kinase NRZ33_08480 PF04055 Radical SAM superfamily NRZ33_08490 PF13464 Domain of unknown function (DUF4115) NRZ33_08495 PF04551 GcpE protein NRZ33_08500 PF13393 Histidyl-tRNA synthetase NRZ33_08500 PF03129 Anticodon binding domain NRZ33_08505 PF09976 Tetratricopeptide repeat-like domain NRZ33_08510 PF13360 PQQ-like domain NRZ33_08515 PF01926 50S ribosome-binding GTPase NRZ33_08515 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NRZ33_08520 PF07191 zinc-ribbons NRZ33_08525 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ33_08525 PF01464 Transglycosylase SLT domain NRZ33_08530 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NRZ33_08530 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NRZ33_08530 PF02769 AIR synthase related protein, C-terminal domain NRZ33_08535 PF00361 Proton-conducting membrane transporter NRZ33_08540 PF00361 Proton-conducting membrane transporter NRZ33_08545 PF00361 Proton-conducting membrane transporter NRZ33_08545 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NRZ33_08550 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NRZ33_08555 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NRZ33_08560 PF12838 4Fe-4S dicluster domain NRZ33_08565 PF00146 NADH dehydrogenase NRZ33_08570 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NRZ33_08570 PF00384 Molybdopterin oxidoreductase NRZ33_08570 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NRZ33_08575 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NRZ33_08575 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NRZ33_08585 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NRZ33_08585 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NRZ33_08590 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NRZ33_08595 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NRZ33_08600 PF13677 Membrane MotB of proton-channel complex MotA/MotB NRZ33_08600 PF00691 OmpA family NRZ33_08605 PF01618 MotA/TolQ/ExbB proton channel family NRZ33_08625 PF04536 TPM domain NRZ33_08635 PF03411 Penicillin-insensitive murein endopeptidase NRZ33_08645 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NRZ33_08650 PF00248 Aldo/keto reductase family NRZ33_08665 PF01212 Beta-eliminating lyase NRZ33_08675 PF00072 Response regulator receiver domain NRZ33_08680 PF03466 LysR substrate binding domain NRZ33_08680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_08690 PF13188 PAS domain NRZ33_08690 PF03707 Bacterial signalling protein N terminal repeat NRZ33_08690 PF00563 EAL domain NRZ33_08690 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_08695 PF00881 Nitroreductase family NRZ33_08710 PF07690 Major Facilitator Superfamily NRZ33_08715 PF03466 LysR substrate binding domain NRZ33_08715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_08720 PF03466 LysR substrate binding domain NRZ33_08720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_08725 PF00925 GTP cyclohydrolase II NRZ33_08730 PF02224 Cytidylate kinase NRZ33_08735 PF00575 S1 RNA binding domain NRZ33_08740 PF00216 Bacterial DNA-binding protein NRZ33_08750 PF18073 Rubredoxin metal binding domain NRZ33_08755 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NRZ33_08770 PF06508 Queuosine biosynthesis protein QueC NRZ33_08775 PF04055 Radical SAM superfamily NRZ33_08780 PF12843 Putative quorum-sensing-regulated virulence factor NRZ33_08785 PF01923 Cobalamin adenosyltransferase NRZ33_08790 PF00816 H-NS histone family NRZ33_08795 PF03553 Na+/H+ antiporter family NRZ33_08800 PF00265 Thymidine kinase NRZ33_08810 PF10722 Putative bacterial sensory transduction regulator NRZ33_08830 PF05638 Type VI secretion system effector, Hcp NRZ33_08835 PF04717 Type VI secretion system, phage-baseplate injector NRZ33_08865 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NRZ33_08875 PF05947 Type VI secretion system, TssF NRZ33_08895 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE NRZ33_08905 PF17871 AAA lid domain NRZ33_08905 PF00004 ATPase family associated with various cellular activities (AAA) NRZ33_08905 PF10431 C-terminal, D2-small domain, of ClpB protein NRZ33_08905 PF07724 AAA domain (Cdc48 subfamily) NRZ33_08910 PF02954 Bacterial regulatory protein, Fis family NRZ33_08910 PF00158 Sigma-54 interaction domain NRZ33_08925 PF06744 Type VI secretion protein IcmF C-terminal NRZ33_08925 PF14331 ImcF-related N-terminal domain NRZ33_08925 PF06761 Intracellular multiplication and human macrophage-killing NRZ33_08940 PF04717 Type VI secretion system, phage-baseplate injector NRZ33_08975 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NRZ33_08975 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NRZ33_08980 PF00313 'Cold-shock' DNA-binding domain NRZ33_08985 PF02617 ATP-dependent Clp protease adaptor protein ClpS NRZ33_08990 PF10431 C-terminal, D2-small domain, of ClpB protein NRZ33_08990 PF02861 Clp amino terminal domain, pathogenicity island component NRZ33_08990 PF17871 AAA lid domain NRZ33_08990 PF07724 AAA domain (Cdc48 subfamily) NRZ33_08990 PF00004 ATPase family associated with various cellular activities (AAA) NRZ33_08995 PF01176 Translation initiation factor 1A / IF-1 NRZ33_09000 PF04376 Arginine-tRNA-protein transferase, N terminus NRZ33_09000 PF04377 Arginine-tRNA-protein transferase, C terminus NRZ33_09005 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NRZ33_09010 PF05433 Glycine zipper 2TM domain NRZ33_09015 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_09015 PF17158 Membrane-associated sensor, integral membrane domain NRZ33_09020 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ33_09025 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NRZ33_09025 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NRZ33_09030 PF01037 Lrp/AsnC ligand binding domain NRZ33_09035 PF17854 FtsK alpha domain NRZ33_09035 PF09397 Ftsk gamma domain NRZ33_09035 PF01580 FtsK/SpoIIIE family NRZ33_09035 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NRZ33_09040 PF03548 Outer membrane lipoprotein carrier protein LolA NRZ33_09045 PF12002 MgsA AAA+ ATPase C terminal NRZ33_09045 PF00004 ATPase family associated with various cellular activities (AAA) NRZ33_09045 PF16193 AAA C-terminal domain NRZ33_09050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NRZ33_09050 PF02403 Seryl-tRNA synthetase N-terminal domain NRZ33_09055 PF02674 Colicin V production protein NRZ33_09060 PF00156 Phosphoribosyl transferase domain NRZ33_09065 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NRZ33_09070 PF00005 ABC transporter NRZ33_09075 PF00005 ABC transporter NRZ33_09075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRZ33_09080 PF12911 N-terminal TM domain of oligopeptide transport permease C NRZ33_09080 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_09085 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_09090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ33_09095 PF00158 Sigma-54 interaction domain NRZ33_09095 PF02954 Bacterial regulatory protein, Fis family NRZ33_09100 PF04012 PspA/IM30 family NRZ33_09105 PF06667 Phage shock protein B NRZ33_09115 PF04317 YcjX-like family, DUF463 NRZ33_09120 PF05128 Domain of unknown function (DUF697) NRZ33_09125 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NRZ33_09130 PF01329 Pterin 4 alpha carbinolamine dehydratase NRZ33_09140 PF00158 Sigma-54 interaction domain NRZ33_09140 PF18024 Helix-turn-helix domain NRZ33_09145 PF13689 YfiR/HmsC-like NRZ33_09150 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_09150 PF17152 Periplasmic sensor domain NRZ33_09155 PF00691 OmpA family NRZ33_09160 PF03741 Integral membrane protein TerC family NRZ33_09170 PF08891 YfcL protein NRZ33_09175 PF00501 AMP-binding enzyme NRZ33_09180 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region NRZ33_09180 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NRZ33_09185 PF04172 LrgB-like family NRZ33_09190 PF03788 LrgA family NRZ33_09205 PF00929 Exonuclease NRZ33_09205 PF08411 Exonuclease C-terminal NRZ33_09210 PF02610 L-arabinose isomerase NRZ33_09210 PF11762 L-arabinose isomerase C-terminal domain NRZ33_09215 PF00596 Class II Aldolase and Adducin N-terminal domain NRZ33_09220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NRZ33_09225 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRZ33_09230 PF00005 ABC transporter NRZ33_09235 PF02653 Branched-chain amino acid transport system / permease component NRZ33_09240 PF12833 Helix-turn-helix domain NRZ33_09240 PF02311 AraC-like ligand binding domain NRZ33_09245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_09245 PF03466 LysR substrate binding domain NRZ33_09250 PF02678 Pirin NRZ33_09250 PF05726 Pirin C-terminal cupin domain NRZ33_09255 PF00444 Ribosomal protein L36 NRZ33_09260 PF01197 Ribosomal protein L31 NRZ33_09275 PF01863 Protein of unknown function DUF45 NRZ33_09290 PF03606 C4-dicarboxylate anaerobic carrier NRZ33_09300 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NRZ33_09300 PF01266 FAD dependent oxidoreductase NRZ33_09305 PF00109 Beta-ketoacyl synthase, N-terminal domain NRZ33_09305 PF02801 Beta-ketoacyl synthase, C-terminal domain NRZ33_09320 PF00285 Citrate synthase, C-terminal domain NRZ33_09325 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NRZ33_09330 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NRZ33_09335 PF00890 FAD binding domain NRZ33_09335 PF02910 Fumarate reductase flavoprotein C-term NRZ33_09340 PF13085 2Fe-2S iron-sulfur cluster binding domain NRZ33_09345 PF00676 Dehydrogenase E1 component NRZ33_09345 PF16870 2-oxoglutarate dehydrogenase C-terminal NRZ33_09345 PF02779 Transketolase, pyrimidine binding domain NRZ33_09345 PF16078 2-oxoglutarate dehydrogenase N-terminus NRZ33_09350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NRZ33_09350 PF00364 Biotin-requiring enzyme NRZ33_09350 PF02817 e3 binding domain NRZ33_09355 PF08442 ATP-grasp domain NRZ33_09355 PF00549 CoA-ligase NRZ33_09360 PF00549 CoA-ligase NRZ33_09360 PF02629 CoA binding domain NRZ33_09370 PF03692 Putative zinc- or iron-chelating domain NRZ33_09375 PF01266 FAD dependent oxidoreductase NRZ33_09380 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_09385 PF00005 ABC transporter NRZ33_09395 PF00392 Bacterial regulatory proteins, gntR family NRZ33_09395 PF07702 UTRA domain NRZ33_09400 PF00266 Aminotransferase class-V NRZ33_09405 PF00202 Aminotransferase class-III NRZ33_09415 PF02901 Pyruvate formate lyase-like NRZ33_09415 PF01228 Glycine radical NRZ33_09420 PF01226 Formate/nitrite transporter NRZ33_09425 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding NRZ33_09425 PF18381 YcaO cyclodehydratase C-terminal domain NRZ33_09430 PF00893 Small Multidrug Resistance protein NRZ33_09435 PF02774 Semialdehyde dehydrogenase, dimerisation domain NRZ33_09435 PF01118 Semialdehyde dehydrogenase, NAD binding domain NRZ33_09440 PF05193 Peptidase M16 inactive domain NRZ33_09440 PF00675 Insulinase (Peptidase family M16) NRZ33_09445 PF01053 Cys/Met metabolism PLP-dependent enzyme NRZ33_09455 PF13460 NAD(P)H-binding NRZ33_09460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_09460 PF03466 LysR substrate binding domain NRZ33_09465 PF00106 short chain dehydrogenase NRZ33_09470 PF12833 Helix-turn-helix domain NRZ33_09475 PF07715 TonB-dependent Receptor Plug Domain NRZ33_09475 PF00593 TonB dependent receptor NRZ33_09485 PF03466 LysR substrate binding domain NRZ33_09485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_09490 PF08267 Cobalamin-independent synthase, N-terminal domain NRZ33_09490 PF01717 Cobalamin-independent synthase, Catalytic domain NRZ33_09500 PF00571 CBS domain NRZ33_09500 PF00478 IMP dehydrogenase / GMP reductase domain NRZ33_09505 PF07969 Amidohydrolase family NRZ33_09515 PF01266 FAD dependent oxidoreductase NRZ33_09520 PF04244 Deoxyribodipyrimidine photo-lyase-related protein NRZ33_09530 PF01212 Beta-eliminating lyase NRZ33_09535 PF01497 Periplasmic binding protein NRZ33_09540 PF01648 4'-phosphopantetheinyl transferase superfamily NRZ33_09540 PF17837 4'-phosphopantetheinyl transferase N-terminal domain NRZ33_09545 PF00005 ABC transporter NRZ33_09550 PF01032 FecCD transport family NRZ33_09555 PF01032 FecCD transport family NRZ33_09560 PF00593 TonB dependent receptor NRZ33_09560 PF07715 TonB-dependent Receptor Plug Domain NRZ33_09575 PF11143 Protein of unknown function (DUF2919) NRZ33_09580 PF01544 CorA-like Mg2+ transporter protein NRZ33_09590 PF01012 Electron transfer flavoprotein domain NRZ33_09595 PF01012 Electron transfer flavoprotein domain NRZ33_09595 PF00766 Electron transfer flavoprotein FAD-binding domain NRZ33_09600 PF00266 Aminotransferase class-V NRZ33_09605 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NRZ33_09610 PF00793 DAHP synthetase I family NRZ33_09615 PF00672 HAMP domain NRZ33_09615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_09620 PF04055 Radical SAM superfamily NRZ33_09625 PF13742 OB-fold nucleic acid binding domain NRZ33_09625 PF02601 Exonuclease VII, large subunit NRZ33_09635 PF02472 Biopolymer transport protein ExbD/TolR NRZ33_09640 PF01618 MotA/TolQ/ExbB proton channel family NRZ33_09650 PF02705 K+ potassium transporter NRZ33_09655 PF00571 CBS domain NRZ33_09655 PF00478 IMP dehydrogenase / GMP reductase domain NRZ33_09660 PF00117 Glutamine amidotransferase class-I NRZ33_09660 PF02540 NAD synthase NRZ33_09660 PF00958 GMP synthase C terminal domain NRZ33_09675 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NRZ33_09675 PF12833 Helix-turn-helix domain NRZ33_09675 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NRZ33_09675 PF02805 Metal binding domain of Ada NRZ33_09690 PF05724 Thiopurine S-methyltransferase (TPMT) NRZ33_09695 PF05193 Peptidase M16 inactive domain NRZ33_09695 PF00675 Insulinase (Peptidase family M16) NRZ33_09700 PF00300 Histidine phosphatase superfamily (branch 1) NRZ33_09710 PF00892 EamA-like transporter family NRZ33_09715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ33_09720 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NRZ33_09725 PF03461 TRCF domain NRZ33_09725 PF17757 UvrB interaction domain NRZ33_09725 PF00271 Helicase conserved C-terminal domain NRZ33_09725 PF00270 DEAD/DEAH box helicase NRZ33_09725 PF02559 CarD-like/TRCF domain NRZ33_09735 PF12704 MacB-like periplasmic core domain NRZ33_09735 PF02687 FtsX-like permease family NRZ33_09740 PF00005 ABC transporter NRZ33_09745 PF12704 MacB-like periplasmic core domain NRZ33_09745 PF02687 FtsX-like permease family NRZ33_09760 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRZ33_09760 PF05698 Bacterial trigger factor protein (TF) C-terminus NRZ33_09760 PF05697 Bacterial trigger factor protein (TF) NRZ33_09765 PF00574 Clp protease NRZ33_09770 PF07724 AAA domain (Cdc48 subfamily) NRZ33_09770 PF06689 ClpX C4-type zinc finger NRZ33_09770 PF10431 C-terminal, D2-small domain, of ClpB protein NRZ33_09775 PF00004 ATPase family associated with various cellular activities (AAA) NRZ33_09775 PF05362 Lon protease (S16) C-terminal proteolytic domain NRZ33_09775 PF02190 ATP-dependent protease La (LON) substrate-binding domain NRZ33_09780 PF00216 Bacterial DNA-binding protein NRZ33_09785 PF13145 PPIC-type PPIASE domain NRZ33_09790 PF12848 ABC transporter NRZ33_09790 PF00005 ABC transporter NRZ33_09795 PF00474 Sodium:solute symporter family NRZ33_09800 PF04341 Protein of unknown function, DUF485 NRZ33_09815 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NRZ33_09815 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NRZ33_09815 PF00378 Enoyl-CoA hydratase/isomerase NRZ33_09855 PF01235 Sodium:alanine symporter family NRZ33_09865 PF06167 Glucose-regulated metallo-peptidase M90 NRZ33_09870 PF01184 GPR1/FUN34/yaaH family NRZ33_09885 PF00376 MerR family regulatory protein NRZ33_09885 PF09278 MerR, DNA binding NRZ33_09890 PF00682 HMGL-like NRZ33_09895 PF00289 Biotin carboxylase, N-terminal domain NRZ33_09895 PF00364 Biotin-requiring enzyme NRZ33_09895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NRZ33_09895 PF02785 Biotin carboxylase C-terminal domain NRZ33_09900 PF00378 Enoyl-CoA hydratase/isomerase NRZ33_09905 PF01039 Carboxyl transferase domain NRZ33_09910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRZ33_09910 PF02770 Acyl-CoA dehydrogenase, middle domain NRZ33_09910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRZ33_09915 PF00171 Aldehyde dehydrogenase family NRZ33_09920 PF02770 Acyl-CoA dehydrogenase, middle domain NRZ33_09920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRZ33_09920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRZ33_09925 PF00378 Enoyl-CoA hydratase/isomerase NRZ33_09930 PF00378 Enoyl-CoA hydratase/isomerase NRZ33_09935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NRZ33_09935 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NRZ33_09945 PF13520 Amino acid permease NRZ33_09950 PF01925 Sulfite exporter TauE/SafE NRZ33_09985 PF03466 LysR substrate binding domain NRZ33_09985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_09990 PF00232 Glycosyl hydrolase family 1 NRZ33_09995 PF00563 EAL domain NRZ33_09995 PF13188 PAS domain NRZ33_09995 PF03707 Bacterial signalling protein N terminal repeat NRZ33_09995 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_10005 PF01966 HD domain NRZ33_10015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_10015 PF03466 LysR substrate binding domain NRZ33_10025 PF00933 Glycosyl hydrolase family 3 N terminal domain NRZ33_10030 PF01261 Xylose isomerase-like TIM barrel NRZ33_10035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRZ33_10035 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NRZ33_10040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_10040 PF03466 LysR substrate binding domain NRZ33_10050 PF03279 Bacterial lipid A biosynthesis acyltransferase NRZ33_10055 PF03279 Bacterial lipid A biosynthesis acyltransferase NRZ33_10070 PF17151 Periplasmic sensor domain NRZ33_10070 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_10080 PF00136 DNA polymerase family B NRZ33_10080 PF03104 DNA polymerase family B, exonuclease domain NRZ33_10110 PF01554 MatE NRZ33_10115 PF06786 Uncharacterised protein family (UPF0253) NRZ33_10120 PF00677 Lumazine binding domain NRZ33_10130 PF13419 Haloacid dehalogenase-like hydrolase NRZ33_10135 PF01370 NAD dependent epimerase/dehydratase family NRZ33_10135 PF02222 ATP-grasp domain NRZ33_10140 PF00892 EamA-like transporter family NRZ33_10145 PF02525 Flavodoxin-like fold NRZ33_10170 PF17783 CvfB-like winged helix domain NRZ33_10170 PF13509 S1 domain NRZ33_10180 PF04269 Protein of unknown function, DUF440 NRZ33_10190 PF00912 Transglycosylase NRZ33_10195 PF04269 Protein of unknown function, DUF440 NRZ33_10200 PF03776 Septum formation topological specificity factor MinE NRZ33_10205 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NRZ33_10210 PF05209 Septum formation inhibitor MinC, N-terminal domain NRZ33_10210 PF03775 Septum formation inhibitor MinC, C-terminal domain NRZ33_10215 PF05166 YcgL domain NRZ33_10225 PF03315 Serine dehydratase beta chain NRZ33_10225 PF03313 Serine dehydratase alpha chain NRZ33_10230 PF03313 Serine dehydratase alpha chain NRZ33_10230 PF03315 Serine dehydratase beta chain NRZ33_10235 PF06865 Pyrimidine/purine nucleoside phosphorylase NRZ33_10240 PF00375 Sodium:dicarboxylate symporter family NRZ33_10245 PF09278 MerR, DNA binding NRZ33_10245 PF00376 MerR family regulatory protein NRZ33_10250 PF02803 Thiolase, C-terminal domain NRZ33_10250 PF00108 Thiolase, N-terminal domain NRZ33_10255 PF08668 HDOD domain NRZ33_10255 PF00563 EAL domain NRZ33_10260 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NRZ33_10265 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NRZ33_10275 PF04542 Sigma-70 region 2 NRZ33_10275 PF08281 Sigma-70, region 4 NRZ33_10300 PF01882 Protein of unknown function DUF58 NRZ33_10305 PF07726 ATPase family associated with various cellular activities (AAA) NRZ33_10305 PF17863 AAA lid domain NRZ33_10310 PF02803 Thiolase, C-terminal domain NRZ33_10310 PF00108 Thiolase, N-terminal domain NRZ33_10315 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NRZ33_10315 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NRZ33_10315 PF00378 Enoyl-CoA hydratase/isomerase NRZ33_10325 PF07152 YaeQ protein NRZ33_10335 PF13188 PAS domain NRZ33_10335 PF00158 Sigma-54 interaction domain NRZ33_10335 PF02954 Bacterial regulatory protein, Fis family NRZ33_10340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NRZ33_10340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NRZ33_10345 PF00291 Pyridoxal-phosphate dependent enzyme NRZ33_10350 PF07687 Peptidase dimerisation domain NRZ33_10350 PF01546 Peptidase family M20/M25/M40 NRZ33_10355 PF01979 Amidohydrolase family NRZ33_10360 PF00696 Amino acid kinase family NRZ33_10365 PF00892 EamA-like transporter family NRZ33_10370 PF13478 XdhC Rossmann domain NRZ33_10370 PF02625 XdhC and CoxI family NRZ33_10380 PF12804 MobA-like NTP transferase domain NRZ33_10385 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NRZ33_10385 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ33_10390 PF01979 Amidohydrolase family NRZ33_10395 PF00941 FAD binding domain in molybdopterin dehydrogenase NRZ33_10400 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NRZ33_10400 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NRZ33_10400 PF01799 [2Fe-2S] binding domain NRZ33_10405 PF00860 Permease family NRZ33_10410 PF01979 Amidohydrolase family NRZ33_10415 PF00860 Permease family NRZ33_10420 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NRZ33_10420 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NRZ33_10425 PF03450 CO dehydrogenase flavoprotein C-terminal domain NRZ33_10425 PF00941 FAD binding domain in molybdopterin dehydrogenase NRZ33_10430 PF00111 2Fe-2S iron-sulfur cluster binding domain NRZ33_10430 PF01799 [2Fe-2S] binding domain NRZ33_10440 PF05433 Glycine zipper 2TM domain NRZ33_10450 PF03606 C4-dicarboxylate anaerobic carrier NRZ33_10455 PF00501 AMP-binding enzyme NRZ33_10455 PF13193 AMP-binding enzyme C-terminal domain NRZ33_10460 PF13280 WYL domain NRZ33_10460 PF08279 HTH domain NRZ33_10470 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NRZ33_10470 PF01502 Phosphoribosyl-AMP cyclohydrolase NRZ33_10475 PF00977 Histidine biosynthesis protein NRZ33_10480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_10480 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_10480 PF01627 Hpt domain NRZ33_10480 PF00072 Response regulator receiver domain NRZ33_10485 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_10485 PF08448 PAS fold NRZ33_10490 PF00072 Response regulator receiver domain NRZ33_10495 PF00977 Histidine biosynthesis protein NRZ33_10500 PF00117 Glutamine amidotransferase class-I NRZ33_10505 PF08645 Polynucleotide kinase 3 phosphatase NRZ33_10505 PF00475 Imidazoleglycerol-phosphate dehydratase NRZ33_10510 PF00155 Aminotransferase class I and II NRZ33_10515 PF00815 Histidinol dehydrogenase NRZ33_10520 PF01634 ATP phosphoribosyltransferase NRZ33_10520 PF08029 HisG, C-terminal domain NRZ33_10530 PF04851 Type III restriction enzyme, res subunit NRZ33_10530 PF13307 Helicase C-terminal domain NRZ33_10535 PF00814 Glycoprotease family NRZ33_10545 PF12697 Alpha/beta hydrolase family NRZ33_10545 PF08241 Methyltransferase domain NRZ33_10550 PF00501 AMP-binding enzyme NRZ33_10550 PF13193 AMP-binding enzyme C-terminal domain NRZ33_10555 PF00570 HRDC domain NRZ33_10555 PF01612 3'-5' exonuclease NRZ33_10560 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ33_10570 PF01207 Dihydrouridine synthase (Dus) NRZ33_10575 PF04304 Protein of unknown function (DUF454) NRZ33_10580 PF00156 Phosphoribosyl transferase domain NRZ33_10585 PF12169 DNA polymerase III subunits gamma and tau domain III NRZ33_10585 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NRZ33_10585 PF12170 DNA polymerase III tau subunit V interacting with alpha NRZ33_10590 PF02575 YbaB/EbfC DNA-binding family NRZ33_10600 PF00196 Bacterial regulatory proteins, luxR family NRZ33_10600 PF00072 Response regulator receiver domain NRZ33_10605 PF02272 DHHA1 domain NRZ33_10605 PF00571 CBS domain NRZ33_10605 PF01743 Poly A polymerase head domain NRZ33_10605 PF01368 DHH family NRZ33_10610 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NRZ33_10610 PF00271 Helicase conserved C-terminal domain NRZ33_10610 PF11898 Domain of unknown function (DUF3418) NRZ33_10610 PF00270 DEAD/DEAH box helicase NRZ33_10610 PF04408 Helicase associated domain (HA2) NRZ33_10620 PF01386 Ribosomal L25p family NRZ33_10625 PF00672 HAMP domain NRZ33_10625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_10625 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_10625 PF01627 Hpt domain NRZ33_10625 PF00072 Response regulator receiver domain NRZ33_10625 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NRZ33_10630 PF00072 Response regulator receiver domain NRZ33_10635 PF00753 Metallo-beta-lactamase superfamily NRZ33_10645 PF00586 AIR synthase related protein, N-terminal domain NRZ33_10645 PF02769 AIR synthase related protein, C-terminal domain NRZ33_10660 PF10672 S-adenosylmethionine-dependent methyltransferase NRZ33_10660 PF17785 PUA-like domain NRZ33_10665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_10665 PF12729 Four helix bundle sensory module for signal transduction NRZ33_10665 PF00672 HAMP domain NRZ33_10670 PF00708 Acylphosphatase NRZ33_10675 PF02798 Glutathione S-transferase, N-terminal domain NRZ33_10675 PF00043 Glutathione S-transferase, C-terminal domain NRZ33_10680 PF08264 Anticodon-binding domain of tRNA NRZ33_10680 PF01588 Putative tRNA binding domain NRZ33_10680 PF09334 tRNA synthetases class I (M) NRZ33_10685 PF10609 NUBPL iron-transfer P-loop NTPase NRZ33_10690 PF00485 Phosphoribulokinase / Uridine kinase family NRZ33_10695 PF00692 dUTPase NRZ33_10700 PF01384 Phosphate transporter family NRZ33_10705 PF12111 Polyribonucleotide phosphorylase C terminal NRZ33_10705 PF10150 Ribonuclease E/G family NRZ33_10705 PF00575 S1 RNA binding domain NRZ33_10710 PF00849 RNA pseudouridylate synthase NRZ33_10710 PF01479 S4 domain NRZ33_10720 PF02545 Maf-like protein NRZ33_10725 PF07690 Major Facilitator Superfamily NRZ33_10730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_10730 PF03466 LysR substrate binding domain NRZ33_10740 PF02620 Large ribosomal RNA subunit accumulation protein YceD NRZ33_10745 PF01783 Ribosomal L32p protein family NRZ33_10750 PF02504 Fatty acid synthesis protein NRZ33_10755 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NRZ33_10755 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NRZ33_10760 PF00698 Acyl transferase domain NRZ33_10770 PF00550 Phosphopantetheine attachment site NRZ33_10775 PF00109 Beta-ketoacyl synthase, N-terminal domain NRZ33_10775 PF02801 Beta-ketoacyl synthase, C-terminal domain NRZ33_10780 PF01063 Amino-transferase class IV NRZ33_10785 PF02618 YceG-like family NRZ33_10790 PF02223 Thymidylate kinase NRZ33_10795 PF09115 DNA polymerase III, delta subunit, C terminal NRZ33_10800 PF01026 TatD related DNase NRZ33_10810 PF00589 Phage integrase family NRZ33_10820 PF01189 16S rRNA methyltransferase RsmB/F NRZ33_10820 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF NRZ33_10820 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF NRZ33_10825 PF02470 MlaD protein NRZ33_10830 PF04403 Paraquat-inducible protein A NRZ33_10845 PF00285 Citrate synthase, C-terminal domain NRZ33_10850 PF03972 MmgE/PrpD family NRZ33_10865 PF06974 Protein of unknown function (DUF1298) NRZ33_10865 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NRZ33_10890 PF00106 short chain dehydrogenase NRZ33_10900 PF07130 YebG protein NRZ33_10920 PF05707 Zonular occludens toxin (Zot) NRZ33_10925 PF10734 Protein of unknown function (DUF2523) NRZ33_10960 PF13654 AAA domain NRZ33_10960 PF05362 Lon protease (S16) C-terminal proteolytic domain NRZ33_10965 PF07977 FabA-like domain NRZ33_10970 PF04957 Ribosome modulation factor NRZ33_10980 PF16326 ABC transporter C-terminal domain NRZ33_10980 PF00005 ABC transporter NRZ33_10980 PF12848 ABC transporter NRZ33_10990 PF10672 S-adenosylmethionine-dependent methyltransferase NRZ33_10990 PF02926 THUMP domain NRZ33_10990 PF01170 Putative RNA methylase family UPF0020 NRZ33_10995 PF07126 Cell-division protein ZapC NRZ33_11000 PF01180 Dihydroorotate dehydrogenase NRZ33_11005 PF05088 Bacterial NAD-glutamate dehydrogenase NRZ33_11015 PF11940 Domain of unknown function (DUF3458) Ig-like fold NRZ33_11015 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NRZ33_11015 PF01433 Peptidase family M1 domain NRZ33_11020 PF11818 C-terminal domain of tail specific protease (DUF3340) NRZ33_11020 PF00595 PDZ domain NRZ33_11020 PF03572 Peptidase family S41 NRZ33_11020 PF17804 Tail specific protease N-terminal domain NRZ33_11025 PF04352 ProQ/FINO family NRZ33_11025 PF17516 ProQ C-terminal domain NRZ33_11030 PF13185 GAF domain NRZ33_11040 PF00115 Cytochrome C and Quinol oxidase polypeptide I NRZ33_11055 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP NRZ33_11055 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NRZ33_11065 PF00403 Heavy-metal-associated domain NRZ33_11080 PF00027 Cyclic nucleotide-binding domain NRZ33_11080 PF13545 Crp-like helix-turn-helix domain NRZ33_11085 PF00582 Universal stress protein family NRZ33_11090 PF01171 PP-loop family NRZ33_11105 PF13417 Glutathione S-transferase, N-terminal domain NRZ33_11110 PF05025 RbsD / FucU transport protein family NRZ33_11115 PF00005 ABC transporter NRZ33_11120 PF02653 Branched-chain amino acid transport system / permease component NRZ33_11125 PF13407 Periplasmic binding protein domain NRZ33_11130 PF00294 pfkB family carbohydrate kinase NRZ33_11135 PF00356 Bacterial regulatory proteins, lacI family NRZ33_11140 PF03707 Bacterial signalling protein N terminal repeat NRZ33_11140 PF00563 EAL domain NRZ33_11140 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_11165 PF00072 Response regulator receiver domain NRZ33_11165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_11165 PF09456 RcsC Alpha-Beta-Loop (ABL) NRZ33_11165 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_11170 PF00216 Bacterial DNA-binding protein NRZ33_11175 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NRZ33_11175 PF01588 Putative tRNA binding domain NRZ33_11175 PF03147 Ferredoxin-fold anticodon binding domain NRZ33_11175 PF03484 tRNA synthetase B5 domain NRZ33_11175 PF03483 B3/4 domain NRZ33_11180 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NRZ33_11180 PF01409 tRNA synthetases class II core domain (F) NRZ33_11185 PF00453 Ribosomal protein L20 NRZ33_11190 PF01632 Ribosomal protein L35 NRZ33_11195 PF00707 Translation initiation factor IF-3, C-terminal domain NRZ33_11195 PF05198 Translation initiation factor IF-3, N-terminal domain NRZ33_11200 PF03129 Anticodon binding domain NRZ33_11200 PF02824 TGS domain NRZ33_11200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NRZ33_11200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NRZ33_11210 PF04055 Radical SAM superfamily NRZ33_11220 PF03989 DNA gyrase C-terminal domain, beta-propeller NRZ33_11220 PF00521 DNA gyrase/topoisomerase IV, subunit A NRZ33_11230 PF13419 Haloacid dehalogenase-like hydrolase NRZ33_11235 PF03477 ATP cone domain NRZ33_11235 PF02867 Ribonucleotide reductase, barrel domain NRZ33_11235 PF00317 Ribonucleotide reductase, all-alpha domain NRZ33_11240 PF00268 Ribonucleotide reductase, small chain NRZ33_11245 PF00111 2Fe-2S iron-sulfur cluster binding domain NRZ33_11250 PF03562 MltA specific insert domain NRZ33_11250 PF06725 3D domain NRZ33_11255 PF06945 Protein of unknown function (DUF1289) NRZ33_11265 PF03613 PTS system mannose/fructose/sorbose family IID component NRZ33_11270 PF03609 PTS system sorbose-specific iic component NRZ33_11275 PF03830 PTS system sorbose subfamily IIB component NRZ33_11275 PF03610 PTS system fructose IIA component NRZ33_11290 PF00356 Bacterial regulatory proteins, lacI family NRZ33_11290 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRZ33_11295 PF06560 Glucose-6-phosphate isomerase (GPI) NRZ33_11300 PF02378 Phosphotransferase system, EIIC NRZ33_11300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRZ33_11305 PF00294 pfkB family carbohydrate kinase NRZ33_11310 PF00381 PTS HPr component phosphorylation site NRZ33_11310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRZ33_11315 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRZ33_11315 PF00356 Bacterial regulatory proteins, lacI family NRZ33_11320 PF03222 Tryptophan/tyrosine permease family NRZ33_11335 PF00270 DEAD/DEAH box helicase NRZ33_11335 PF00271 Helicase conserved C-terminal domain NRZ33_11345 PF01264 Chorismate synthase NRZ33_11350 PF05175 Methyltransferase small domain NRZ33_11355 PF01713 Smr domain NRZ33_11365 PF08448 PAS fold NRZ33_11365 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_11370 PF00300 Histidine phosphatase superfamily (branch 1) NRZ33_11385 PF00704 Glycosyl hydrolases family 18 NRZ33_11385 PF08329 Chitinase A, N-terminal domain NRZ33_11395 PF00574 Clp protease NRZ33_11405 PF08274 PhnA Zinc-Ribbon NRZ33_11405 PF03831 PhnA domain NRZ33_11415 PF02567 Phenazine biosynthesis-like protein NRZ33_11445 PF01327 Polypeptide deformylase NRZ33_11460 PF03330 Lytic transglycolase NRZ33_11460 PF05036 Sporulation related domain NRZ33_11465 PF16330 MukB hinge domain NRZ33_11465 PF04310 MukB N-terminal NRZ33_11470 PF04288 MukE-like family NRZ33_11475 PF03882 MukF winged-helix domain NRZ33_11475 PF17193 MukF C-terminal domain NRZ33_11475 PF17192 MukF middle domain NRZ33_11480 PF13847 Methyltransferase domain NRZ33_11485 PF02698 DUF218 domain NRZ33_11490 PF00121 Triosephosphate isomerase NRZ33_11495 PF00365 Phosphofructokinase NRZ33_11500 PF01546 Peptidase family M20/M25/M40 NRZ33_11500 PF07687 Peptidase dimerisation domain NRZ33_11505 PF13419 Haloacid dehalogenase-like hydrolase NRZ33_11510 PF00883 Cytosol aminopeptidase family, catalytic domain NRZ33_11510 PF02789 Cytosol aminopeptidase family, N-terminal domain NRZ33_11550 PF00128 Alpha amylase, catalytic domain NRZ33_11550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NRZ33_11560 PF11398 Protein of unknown function (DUF2813) NRZ33_11570 PF14525 AraC-binding-like domain NRZ33_11570 PF12833 Helix-turn-helix domain NRZ33_11580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_11580 PF03466 LysR substrate binding domain NRZ33_11585 PF01925 Sulfite exporter TauE/SafE NRZ33_11590 PF03942 DTW domain NRZ33_11600 PF01820 D-ala D-ala ligase N-terminus NRZ33_11600 PF07478 D-ala D-ala ligase C-terminus NRZ33_11610 PF00255 Glutathione peroxidase NRZ33_11615 PF00270 DEAD/DEAH box helicase NRZ33_11615 PF00271 Helicase conserved C-terminal domain NRZ33_11620 PF13673 Acetyltransferase (GNAT) domain NRZ33_11630 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NRZ33_11640 PF01928 CYTH domain NRZ33_11655 PF00465 Iron-containing alcohol dehydrogenase NRZ33_11660 PF03992 Antibiotic biosynthesis monooxygenase NRZ33_11665 PF08543 Phosphomethylpyrimidine kinase NRZ33_11685 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NRZ33_11685 PF00561 alpha/beta hydrolase fold NRZ33_11690 PF01575 MaoC like domain NRZ33_11705 PF00664 ABC transporter transmembrane region NRZ33_11705 PF00005 ABC transporter NRZ33_11710 PF00664 ABC transporter transmembrane region NRZ33_11710 PF00005 ABC transporter NRZ33_11715 PF00672 HAMP domain NRZ33_11715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_11715 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_11715 PF01627 Hpt domain NRZ33_11715 PF00072 Response regulator receiver domain NRZ33_11715 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NRZ33_11720 PF00085 Thioredoxin NRZ33_11725 PF00939 Sodium:sulfate symporter transmembrane region NRZ33_11730 PF00343 Carbohydrate phosphorylase NRZ33_11750 PF04715 Anthranilate synthase component I, N terminal region NRZ33_11750 PF00425 chorismate binding enzyme NRZ33_11755 PF00293 NUDIX domain NRZ33_11760 PF03222 Tryptophan/tyrosine permease family NRZ33_11765 PF00375 Sodium:dicarboxylate symporter family NRZ33_11770 PF00270 DEAD/DEAH box helicase NRZ33_11770 PF00271 Helicase conserved C-terminal domain NRZ33_11770 PF00570 HRDC domain NRZ33_11770 PF16124 RecQ zinc-binding NRZ33_11770 PF09382 RQC domain NRZ33_11775 PF08298 PrkA AAA domain NRZ33_11775 PF06798 PrkA serine protein kinase C-terminal domain NRZ33_11780 PF04285 Protein of unknown function (DUF444) NRZ33_11785 PF04293 SpoVR like protein NRZ33_11790 PF00392 Bacterial regulatory proteins, gntR family NRZ33_11790 PF07840 FadR C-terminal domain NRZ33_11795 PF06450 Bacterial Na+/H+ antiporter B (NhaB) NRZ33_11800 PF02600 Disulfide bond formation protein DsbB NRZ33_11805 PF09335 SNARE associated Golgi protein NRZ33_11815 PF17757 UvrB interaction domain NRZ33_11815 PF12344 Ultra-violet resistance protein B NRZ33_11815 PF02151 UvrB/uvrC motif NRZ33_11815 PF04851 Type III restriction enzyme, res subunit NRZ33_11815 PF00271 Helicase conserved C-terminal domain NRZ33_11825 PF02080 TrkA-C domain NRZ33_11825 PF06826 Predicted Permease Membrane Region NRZ33_11830 PF01464 Transglycosylase SLT domain NRZ33_11830 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ33_11845 PF01970 Tripartite tricarboxylate transporter TctA family NRZ33_11855 PF17203 Single cache domain 3 NRZ33_11855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_11855 PF00989 PAS fold NRZ33_11855 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NRZ33_11860 PF00480 ROK family NRZ33_11860 PF01047 MarR family NRZ33_11865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_11865 PF00672 HAMP domain NRZ33_11865 PF17200 Single Cache domain 2 NRZ33_11870 PF02810 SEC-C motif NRZ33_11875 PF01266 FAD dependent oxidoreductase NRZ33_11875 PF04324 BFD-like [2Fe-2S] binding domain NRZ33_11880 PF00890 FAD binding domain NRZ33_11885 PF02754 Cysteine-rich domain NRZ33_11885 PF13183 4Fe-4S dicluster domain NRZ33_11890 PF02335 Cytochrome c552 NRZ33_11895 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) NRZ33_11895 PF13435 Cytochrome c554 and c-prime NRZ33_11900 PF00037 4Fe-4S binding domain NRZ33_11900 PF13247 4Fe-4S dicluster domain NRZ33_11905 PF03916 Polysulphide reductase, NrfD NRZ33_11910 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NRZ33_11910 PF01578 Cytochrome C assembly protein NRZ33_11915 PF08534 Redoxin NRZ33_11920 PF03918 Cytochrome C biogenesis protein NRZ33_11925 PF00293 NUDIX domain NRZ33_11930 PF00768 D-alanyl-D-alanine carboxypeptidase NRZ33_11935 PF00975 Thioesterase domain NRZ33_11935 PF00550 Phosphopantetheine attachment site NRZ33_11935 PF00668 Condensation domain NRZ33_11935 PF13193 AMP-binding enzyme C-terminal domain NRZ33_11935 PF00501 AMP-binding enzyme NRZ33_11940 PF07993 Male sterility protein NRZ33_11940 PF00501 AMP-binding enzyme NRZ33_11940 PF13193 AMP-binding enzyme C-terminal domain NRZ33_11940 PF00668 Condensation domain NRZ33_11940 PF00550 Phosphopantetheine attachment site NRZ33_11950 PF13193 AMP-binding enzyme C-terminal domain NRZ33_11950 PF00550 Phosphopantetheine attachment site NRZ33_11950 PF00975 Thioesterase domain NRZ33_11950 PF00668 Condensation domain NRZ33_11950 PF00501 AMP-binding enzyme NRZ33_11955 PF00857 Isochorismatase family NRZ33_11955 PF00550 Phosphopantetheine attachment site NRZ33_11960 PF00501 AMP-binding enzyme NRZ33_11960 PF13193 AMP-binding enzyme C-terminal domain NRZ33_11965 PF00425 chorismate binding enzyme NRZ33_11975 PF07273 Protein of unknown function (DUF1439) NRZ33_11985 PF00483 Nucleotidyl transferase NRZ33_11990 PF00563 EAL domain NRZ33_11990 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_11990 PF03707 Bacterial signalling protein N terminal repeat NRZ33_12005 PF00294 pfkB family carbohydrate kinase NRZ33_12015 PF00762 Ferrochelatase NRZ33_12020 PF05191 Adenylate kinase, active site lid NRZ33_12025 PF00183 Hsp90 protein NRZ33_12025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_12030 PF13662 Toprim domain NRZ33_12030 PF02132 RecR protein NRZ33_12035 PF02634 FdhD/NarQ family NRZ33_12040 PF00158 Sigma-54 interaction domain NRZ33_12040 PF02954 Bacterial regulatory protein, Fis family NRZ33_12040 PF01590 GAF domain NRZ33_12055 PF13247 4Fe-4S dicluster domain NRZ33_12055 PF12800 4Fe-4S binding domain NRZ33_12065 PF02705 K+ potassium transporter NRZ33_12075 PF07690 Major Facilitator Superfamily NRZ33_12080 PF13419 Haloacid dehalogenase-like hydrolase NRZ33_12085 PF08240 Alcohol dehydrogenase GroES-like domain NRZ33_12085 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NRZ33_12090 PF00202 Aminotransferase class-III NRZ33_12095 PF00037 4Fe-4S binding domain NRZ33_12095 PF12798 4Fe-4S binding domain NRZ33_12100 PF00361 Proton-conducting membrane transporter NRZ33_12105 PF00146 NADH dehydrogenase NRZ33_12110 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NRZ33_12110 PF00374 Nickel-dependent hydrogenase NRZ33_12110 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NRZ33_12115 PF12838 4Fe-4S dicluster domain NRZ33_12120 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NRZ33_12125 PF07450 Formate hydrogenlyase maturation protein HycH NRZ33_12130 PF01750 Hydrogenase maturation protease NRZ33_12140 PF03841 L-seryl-tRNA selenium transferase NRZ33_12140 PF12390 Selenocysteine synthase N terminal NRZ33_12145 PF09107 Elongation factor SelB, winged helix NRZ33_12145 PF09106 Elongation factor SelB, winged helix NRZ33_12145 PF09105 Elongation factor SelB, winged helix NRZ33_12145 PF03144 Elongation factor Tu domain 2 NRZ33_12145 PF00009 Elongation factor Tu GTP binding domain NRZ33_12150 PF17788 HypF Kae1-like domain NRZ33_12150 PF00708 Acylphosphatase NRZ33_12150 PF07503 HypF finger NRZ33_12150 PF01300 Telomere recombination NRZ33_12155 PF01455 HupF/HypC family NRZ33_12160 PF01924 Hydrogenase formation hypA family NRZ33_12165 PF02769 AIR synthase related protein, C-terminal domain NRZ33_12165 PF00586 AIR synthase related protein, N-terminal domain NRZ33_12170 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA NRZ33_12180 PF02492 CobW/HypB/UreG, nucleotide-binding domain NRZ33_12185 PF00005 ABC transporter NRZ33_12190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRZ33_12190 PF00005 ABC transporter NRZ33_12195 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_12195 PF12911 N-terminal TM domain of oligopeptide transport permease C NRZ33_12200 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_12205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ33_12210 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE NRZ33_12215 PF01750 Hydrogenase maturation protease NRZ33_12220 PF00374 Nickel-dependent hydrogenase NRZ33_12225 PF03916 Polysulphide reductase, NrfD NRZ33_12230 PF13247 4Fe-4S dicluster domain NRZ33_12235 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal NRZ33_12235 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NRZ33_12240 PF00072 Response regulator receiver domain NRZ33_12250 PF01584 CheW-like domain NRZ33_12250 PF01627 Hpt domain NRZ33_12250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_12250 PF02895 Signal transducing histidine kinase, homodimeric domain NRZ33_12250 PF09078 CheY binding NRZ33_12255 PF00672 HAMP domain NRZ33_12255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_12255 PF12729 Four helix bundle sensory module for signal transduction NRZ33_12260 PF01584 CheW-like domain NRZ33_12265 PF01739 CheR methyltransferase, SAM binding domain NRZ33_12265 PF03705 CheR methyltransferase, all-alpha domain NRZ33_12270 PF01339 CheB methylesterase NRZ33_12270 PF00072 Response regulator receiver domain NRZ33_12275 PF03707 Bacterial signalling protein N terminal repeat NRZ33_12275 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_12275 PF00563 EAL domain NRZ33_12280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_12280 PF00672 HAMP domain NRZ33_12280 PF12729 Four helix bundle sensory module for signal transduction NRZ33_12285 PF00842 Alanine racemase, C-terminal domain NRZ33_12285 PF01168 Alanine racemase, N-terminal domain NRZ33_12300 PF01740 STAS domain NRZ33_12300 PF00916 Sulfate permease family NRZ33_12330 PF03239 Iron permease FTR1 family NRZ33_12335 PF01593 Flavin containing amine oxidoreductase NRZ33_12350 PF07690 Major Facilitator Superfamily NRZ33_12360 PF00005 ABC transporter NRZ33_12365 PF12704 MacB-like periplasmic core domain NRZ33_12365 PF02687 FtsX-like permease family NRZ33_12385 PF02913 FAD linked oxidases, C-terminal domain NRZ33_12385 PF01565 FAD binding domain NRZ33_12390 PF02589 LUD domain NRZ33_12395 PF11870 Domain of unknown function (DUF3390) NRZ33_12395 PF13183 4Fe-4S dicluster domain NRZ33_12395 PF02589 LUD domain NRZ33_12400 PF02754 Cysteine-rich domain NRZ33_12405 PF02652 L-lactate permease NRZ33_12410 PF03466 LysR substrate binding domain NRZ33_12410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_12420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRZ33_12425 PF00561 alpha/beta hydrolase fold NRZ33_12445 PF01625 Peptide methionine sulfoxide reductase NRZ33_12450 PF00696 Amino acid kinase family NRZ33_12450 PF00583 Acetyltransferase (GNAT) family NRZ33_12455 PF00696 Amino acid kinase family NRZ33_12455 PF01842 ACT domain NRZ33_12465 PF00884 Sulfatase NRZ33_12470 PF02016 LD-carboxypeptidase N-terminal domain NRZ33_12470 PF17676 LD-carboxypeptidase C-terminal domain NRZ33_12475 PF01734 Patatin-like phospholipase NRZ33_12485 PF01906 Putative heavy-metal-binding NRZ33_12505 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ33_12510 PF05728 Uncharacterised protein family (UPF0227) NRZ33_12515 PF00860 Permease family NRZ33_12520 PF08439 Oligopeptidase F NRZ33_12520 PF01432 Peptidase family M3 NRZ33_12525 PF01432 Peptidase family M3 NRZ33_12525 PF08439 Oligopeptidase F NRZ33_12530 PF05661 Protein of unknown function (DUF808) NRZ33_12540 PF07549 SecD/SecF GG Motif NRZ33_12540 PF02355 Protein export membrane protein NRZ33_12545 PF07549 SecD/SecF GG Motif NRZ33_12545 PF13721 SecD export protein N-terminal TM region NRZ33_12545 PF02355 Protein export membrane protein NRZ33_12580 PF01230 HIT domain NRZ33_12585 PF00672 HAMP domain NRZ33_12585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_12595 PF01979 Amidohydrolase family NRZ33_12610 PF00375 Sodium:dicarboxylate symporter family NRZ33_12620 PF00842 Alanine racemase, C-terminal domain NRZ33_12620 PF01168 Alanine racemase, N-terminal domain NRZ33_12625 PF03741 Integral membrane protein TerC family NRZ33_12630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRZ33_12630 PF00005 ABC transporter NRZ33_12640 PF00005 ABC transporter NRZ33_12640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRZ33_12645 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_12645 PF12911 N-terminal TM domain of oligopeptide transport permease C NRZ33_12650 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_12655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ33_12660 PF01914 MarC family integral membrane protein NRZ33_12670 PF00171 Aldehyde dehydrogenase family NRZ33_12670 PF00465 Iron-containing alcohol dehydrogenase NRZ33_12675 PF01966 HD domain NRZ33_12680 PF07694 5TMR of 5TMR-LYT NRZ33_12680 PF06580 Histidine kinase NRZ33_12685 PF00072 Response regulator receiver domain NRZ33_12685 PF04397 LytTr DNA-binding domain NRZ33_12690 PF02554 Carbon starvation protein CstA NRZ33_12695 PF11742 Protein of unknown function (DUF3302) NRZ33_12700 PF00529 HlyD membrane-fusion protein of T1SS NRZ33_12700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ33_12705 PF04851 Type III restriction enzyme, res subunit NRZ33_12705 PF00271 Helicase conserved C-terminal domain NRZ33_12710 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NRZ33_12715 PF00462 Glutaredoxin NRZ33_12725 PF00155 Aminotransferase class I and II NRZ33_12730 PF03606 C4-dicarboxylate anaerobic carrier NRZ33_12735 PF07055 Enoyl reductase FAD binding domain NRZ33_12735 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NRZ33_12735 PF12241 Trans-2-enoyl-CoA reductase catalytic region NRZ33_12745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_12745 PF13426 PAS domain NRZ33_12745 PF08447 PAS fold NRZ33_12755 PF00892 EamA-like transporter family NRZ33_12760 PF02508 Rnf-Nqr subunit, membrane protein NRZ33_12765 PF04060 Putative Fe-S cluster NRZ33_12770 PF10531 SLBB domain NRZ33_12770 PF12838 4Fe-4S dicluster domain NRZ33_12770 PF13375 RnfC Barrel sandwich hybrid domain NRZ33_12770 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NRZ33_12775 PF03116 NQR2, RnfD, RnfE family NRZ33_12780 PF04205 FMN-binding domain NRZ33_12785 PF02508 Rnf-Nqr subunit, membrane protein NRZ33_12790 PF10576 Iron-sulfur binding domain of endonuclease III NRZ33_12790 PF00633 Helix-hairpin-helix motif NRZ33_12790 PF00730 HhH-GPD superfamily base excision DNA repair protein NRZ33_12795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRZ33_12800 PF18393 MotY N-terminal domain NRZ33_12800 PF00691 OmpA family NRZ33_12805 PF00672 HAMP domain NRZ33_12805 PF12729 Four helix bundle sensory module for signal transduction NRZ33_12805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_12810 PF00929 Exonuclease NRZ33_12815 PF03553 Na+/H+ antiporter family NRZ33_12815 PF13726 Na+-H+ antiporter family NRZ33_12820 PF03880 DbpA RNA binding domain NRZ33_12820 PF00271 Helicase conserved C-terminal domain NRZ33_12820 PF00270 DEAD/DEAH box helicase NRZ33_12825 PF03061 Thioesterase superfamily NRZ33_12835 PF13183 4Fe-4S dicluster domain NRZ33_12835 PF01565 FAD binding domain NRZ33_12835 PF02913 FAD linked oxidases, C-terminal domain NRZ33_12845 PF03471 Transporter associated domain NRZ33_12845 PF03741 Integral membrane protein TerC family NRZ33_12850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NRZ33_12855 PF00962 Adenosine/AMP deaminase NRZ33_12860 PF13344 Haloacid dehalogenase-like hydrolase NRZ33_12865 PF00999 Sodium/hydrogen exchanger family NRZ33_12865 PF02254 TrkA-N domain NRZ33_12875 PF13537 Glutamine amidotransferase domain NRZ33_12875 PF00733 Asparagine synthase NRZ33_12885 PF14497 Glutathione S-transferase, C-terminal domain NRZ33_12885 PF02798 Glutathione S-transferase, N-terminal domain NRZ33_12895 PF04209 homogentisate 1,2-dioxygenase NRZ33_12900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRZ33_12910 PF00849 RNA pseudouridylate synthase NRZ33_12915 PF00563 EAL domain NRZ33_12915 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_12915 PF13426 PAS domain NRZ33_12920 PF08447 PAS fold NRZ33_12920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_12930 PF03706 Lysylphosphatidylglycerol synthase TM region NRZ33_12930 PF09924 Uncharacterised conserved protein (DUF2156) NRZ33_12935 PF08019 Phosphoethanolamine transferase EptA/EptB NRZ33_12935 PF00884 Sulfatase NRZ33_12950 PF01027 Inhibitor of apoptosis-promoting Bax1 NRZ33_12955 PF12805 FUSC-like inner membrane protein yccS NRZ33_12960 PF04358 DsrC like protein NRZ33_12965 PF05036 Sporulation related domain NRZ33_12970 PF08245 Mur ligase middle domain NRZ33_12970 PF02875 Mur ligase family, glutamate ligase domain NRZ33_12975 PF01039 Carboxyl transferase domain NRZ33_12975 PF17848 Acetyl-coA carboxylase zinc finger domain NRZ33_12980 PF01416 tRNA pseudouridine synthase NRZ33_12990 PF01118 Semialdehyde dehydrogenase, NAD binding domain NRZ33_12990 PF02774 Semialdehyde dehydrogenase, dimerisation domain NRZ33_12995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRZ33_12995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRZ33_12995 PF11890 Domain of unknown function (DUF3410) NRZ33_13000 PF01569 PAP2 superfamily NRZ33_13005 PF03180 NLPA lipoprotein NRZ33_13015 PF01483 Proprotein convertase P-domain NRZ33_13015 PF00082 Subtilase family NRZ33_13025 PF14310 Fibronectin type III-like domain NRZ33_13025 PF00933 Glycosyl hydrolase family 3 N terminal domain NRZ33_13025 PF01915 Glycosyl hydrolase family 3 C-terminal domain NRZ33_13035 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NRZ33_13035 PF02896 PEP-utilising enzyme, TIM barrel domain NRZ33_13035 PF00391 PEP-utilising enzyme, mobile domain NRZ33_13040 PF03618 Kinase/pyrophosphorylase NRZ33_13050 PF00324 Amino acid permease NRZ33_13095 PF03412 Peptidase C39 family NRZ33_13095 PF00005 ABC transporter NRZ33_13095 PF00664 ABC transporter transmembrane region NRZ33_13100 PF04055 Radical SAM superfamily NRZ33_13100 PF16199 Radical_SAM C-terminal domain NRZ33_13105 PF00310 Glutamine amidotransferases class-II NRZ33_13105 PF04898 Glutamate synthase central domain NRZ33_13105 PF01645 Conserved region in glutamate synthase NRZ33_13105 PF01493 GXGXG motif NRZ33_13110 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NRZ33_13110 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ33_13115 PF00005 ABC transporter NRZ33_13120 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_13125 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ33_13140 PF09278 MerR, DNA binding NRZ33_13140 PF00376 MerR family regulatory protein NRZ33_13155 PF14521 Lysine-specific metallo-endopeptidase NRZ33_13165 PF00271 Helicase conserved C-terminal domain NRZ33_13165 PF00270 DEAD/DEAH box helicase NRZ33_13170 PF13302 Acetyltransferase (GNAT) domain NRZ33_13200 PF07759 Protein of unknown function (DUF1615) NRZ33_13205 PF00682 HMGL-like NRZ33_13205 PF08502 LeuA allosteric (dimerisation) domain NRZ33_13210 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NRZ33_13210 PF02142 MGS-like domain NRZ33_13210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NRZ33_13215 PF00117 Glutamine amidotransferase class-I NRZ33_13215 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NRZ33_13220 PF05173 Dihydrodipicolinate reductase, C-terminus NRZ33_13220 PF01113 Dihydrodipicolinate reductase, N-terminus NRZ33_13230 PF01812 5-formyltetrahydrofolate cyclo-ligase family NRZ33_13235 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NRZ33_13240 PF01842 ACT domain NRZ33_13240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRZ33_13240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRZ33_13245 PF01219 Prokaryotic diacylglycerol kinase NRZ33_13250 PF00793 DAHP synthetase I family NRZ33_13255 PF00005 ABC transporter NRZ33_13260 PF01032 FecCD transport family NRZ33_13265 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ33_13265 PF00072 Response regulator receiver domain NRZ33_13265 PF00989 PAS fold NRZ33_13265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_13265 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_13265 PF01627 Hpt domain NRZ33_13275 PF00437 Type II/IV secretion system protein NRZ33_13280 PF00483 Nucleotidyl transferase NRZ33_13295 PF07664 Ferrous iron transport protein B C terminus NRZ33_13295 PF02421 Ferrous iron transport protein B NRZ33_13295 PF07670 Nucleoside recognition NRZ33_13305 PF01253 Translation initiation factor SUI1 NRZ33_13310 PF01169 Uncharacterized protein family UPF0016 NRZ33_13340 PF13185 GAF domain NRZ33_13340 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_13360 PF01406 tRNA synthetases class I (C) catalytic domain NRZ33_13360 PF09190 DALR domain NRZ33_13365 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NRZ33_13375 PF00149 Calcineurin-like phosphoesterase NRZ33_13380 PF03916 Polysulphide reductase, NrfD NRZ33_13385 PF00037 4Fe-4S binding domain NRZ33_13385 PF13247 4Fe-4S dicluster domain NRZ33_13390 PF13435 Cytochrome c554 and c-prime NRZ33_13390 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) NRZ33_13405 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) NRZ33_13410 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB NRZ33_13415 PF00672 HAMP domain NRZ33_13415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_13420 PF08447 PAS fold NRZ33_13420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_13420 PF13426 PAS domain NRZ33_13440 PF01066 CDP-alcohol phosphatidyltransferase NRZ33_13445 PF01541 GIY-YIG catalytic domain NRZ33_13445 PF08459 UvrC Helix-hairpin-helix N-terminal NRZ33_13445 PF02151 UvrB/uvrC motif NRZ33_13450 PF00196 Bacterial regulatory proteins, luxR family NRZ33_13450 PF00072 Response regulator receiver domain NRZ33_13455 PF02348 Cytidylyltransferase NRZ33_13460 PF03966 Trm112p-like protein NRZ33_13465 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NRZ33_13470 PF00664 ABC transporter transmembrane region NRZ33_13470 PF00005 ABC transporter NRZ33_13475 PF03772 Competence protein NRZ33_13475 PF00753 Metallo-beta-lactamase superfamily NRZ33_13490 PF05872 Bacterial protein of unknown function (DUF853) NRZ33_13495 PF00155 Aminotransferase class I and II NRZ33_13505 PF13609 Gram-negative porin NRZ33_13510 PF06733 DEAD_2 NRZ33_13510 PF13307 Helicase C-terminal domain NRZ33_13520 PF00850 Histone deacetylase domain NRZ33_13525 PF07690 Major Facilitator Superfamily NRZ33_13530 PF01926 50S ribosome-binding GTPase NRZ33_13535 PF00245 Alkaline phosphatase NRZ33_13540 PF00245 Alkaline phosphatase NRZ33_13555 PF01272 Transcription elongation factor, GreA/GreB, C-term NRZ33_13555 PF14760 Rnk N-terminus NRZ33_13560 PF00072 Response regulator receiver domain NRZ33_13560 PF00196 Bacterial regulatory proteins, luxR family NRZ33_13565 PF05231 MASE1 NRZ33_13565 PF07730 Histidine kinase NRZ33_13565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_13570 PF07690 Major Facilitator Superfamily NRZ33_13575 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_13580 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ33_13585 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_13590 PF00005 ABC transporter NRZ33_13605 PF04116 Fatty acid hydroxylase superfamily NRZ33_13610 PF13520 Amino acid permease NRZ33_13615 PF02607 B12 binding domain NRZ33_13615 PF02965 Vitamin B12 dependent methionine synthase, activation domain NRZ33_13615 PF00809 Pterin binding enzyme NRZ33_13615 PF02310 B12 binding domain NRZ33_13615 PF02574 Homocysteine S-methyltransferase NRZ33_13625 PF00571 CBS domain NRZ33_13625 PF03471 Transporter associated domain NRZ33_13625 PF01595 Cyclin M transmembrane N-terminal domain NRZ33_13630 PF01895 PhoU domain NRZ33_13635 PF00005 ABC transporter NRZ33_13640 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_13645 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_13650 PF14437 MafB19-like deaminase NRZ33_13665 PF01274 Malate synthase NRZ33_13670 PF00463 Isocitrate lyase family NRZ33_13675 PF00308 Bacterial dnaA protein NRZ33_13690 PF00586 AIR synthase related protein, N-terminal domain NRZ33_13690 PF02769 AIR synthase related protein, C-terminal domain NRZ33_13695 PF00551 Formyl transferase NRZ33_13700 PF01784 NIF3 (NGG1p interacting factor 3) NRZ33_13705 PF00072 Response regulator receiver domain NRZ33_13705 PF00158 Sigma-54 interaction domain NRZ33_13705 PF02954 Bacterial regulatory protein, Fis family NRZ33_13710 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_13710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_13710 PF13188 PAS domain NRZ33_13715 PF00158 Sigma-54 interaction domain NRZ33_13715 PF02954 Bacterial regulatory protein, Fis family NRZ33_13715 PF06490 Flagellar regulatory protein FleQ NRZ33_13725 PF01842 ACT domain NRZ33_13730 PF13089 Polyphosphate kinase N-terminal domain NRZ33_13730 PF02503 Polyphosphate kinase middle domain NRZ33_13730 PF13090 Polyphosphate kinase C-terminal domain 2 NRZ33_13730 PF17941 Polyphosphate kinase C-terminal domain 1 NRZ33_13735 PF02541 Ppx/GppA phosphatase family NRZ33_13740 PF03448 MgtE intracellular N domain NRZ33_13740 PF01769 Divalent cation transporter NRZ33_13740 PF00571 CBS domain NRZ33_13745 PF00669 Bacterial flagellin N-terminal helical region NRZ33_13750 PF00460 Flagella basal body rod protein NRZ33_13750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRZ33_13755 PF10135 Rod binding protein NRZ33_13755 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NRZ33_13760 PF02119 Flagellar P-ring protein NRZ33_13765 PF02107 Flagellar L-ring protein NRZ33_13770 PF00460 Flagella basal body rod protein NRZ33_13770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRZ33_13775 PF00460 Flagella basal body rod protein NRZ33_13775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRZ33_13780 PF07559 Flagellar basal body protein FlaE NRZ33_13780 PF00460 Flagella basal body rod protein NRZ33_13780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRZ33_13790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRZ33_13790 PF00460 Flagella basal body rod protein NRZ33_13795 PF00460 Flagella basal body rod protein NRZ33_13800 PF03705 CheR methyltransferase, all-alpha domain NRZ33_13800 PF01739 CheR methyltransferase, SAM binding domain NRZ33_13805 PF01584 CheW-like domain NRZ33_13805 PF00072 Response regulator receiver domain NRZ33_13810 PF13144 Chaperone for flagella basal body P-ring formation NRZ33_13825 PF12850 Calcineurin-like phosphoesterase superfamily domain NRZ33_13830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ33_13840 PF01479 S4 domain NRZ33_13840 PF00849 RNA pseudouridylate synthase NRZ33_13845 PF11871 Domain of unknown function (DUF3391) NRZ33_13845 PF01966 HD domain NRZ33_13855 PF00923 Transaldolase/Fructose-6-phosphate aldolase NRZ33_13860 PF04055 Radical SAM superfamily NRZ33_13865 PF01228 Glycine radical NRZ33_13865 PF02901 Pyruvate formate lyase-like NRZ33_13870 PF00455 DeoR C terminal sensor domain NRZ33_13870 PF08220 DeoR-like helix-turn-helix domain NRZ33_13875 PF00892 EamA-like transporter family NRZ33_13880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ33_13905 PF00313 'Cold-shock' DNA-binding domain NRZ33_13910 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NRZ33_13910 PF00364 Biotin-requiring enzyme NRZ33_13910 PF02817 e3 binding domain NRZ33_13915 PF02779 Transketolase, pyrimidine binding domain NRZ33_13915 PF02780 Transketolase, C-terminal domain NRZ33_13920 PF00676 Dehydrogenase E1 component NRZ33_13925 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NRZ33_13935 PF05472 DNA replication terminus site-binding protein (Ter protein) NRZ33_13940 PF04434 SWIM zinc finger NRZ33_13940 PF00176 SNF2 family N-terminal domain NRZ33_13940 PF00271 Helicase conserved C-terminal domain NRZ33_13945 PF04337 Protein of unknown function, DUF480 NRZ33_13955 PF06082 Exopolysaccharide biosynthesis protein YbjH NRZ33_13960 PF06251 Capsule biosynthesis GfcC NRZ33_13965 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF NRZ33_13975 PF13614 AAA domain NRZ33_13975 PF13807 G-rich domain on putative tyrosine kinase NRZ33_13975 PF02706 Chain length determinant protein NRZ33_13980 PF01451 Low molecular weight phosphotyrosine protein phosphatase NRZ33_13985 PF18412 Outer-membrane lipoprotein Wza C-terminal domain NRZ33_13985 PF02563 Polysaccharide biosynthesis/export protein NRZ33_13985 PF10531 SLBB domain NRZ33_14005 PF00535 Glycosyl transferase family 2 NRZ33_14035 PF00953 Glycosyl transferase family 4 NRZ33_14045 PF08019 Phosphoethanolamine transferase EptA/EptB NRZ33_14045 PF00884 Sulfatase NRZ33_14050 PF01709 Transcriptional regulator NRZ33_14055 PF00152 tRNA synthetases class II (D, K and N) NRZ33_14055 PF01336 OB-fold nucleic acid binding domain NRZ33_14055 PF02938 GAD domain NRZ33_14060 PF01904 Protein of unknown function DUF72 NRZ33_14065 PF13649 Methyltransferase domain NRZ33_14070 PF08003 Protein of unknown function (DUF1698) NRZ33_14090 PF10417 C-terminal domain of 1-Cys peroxiredoxin NRZ33_14090 PF00578 AhpC/TSA family NRZ33_14095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_14095 PF03466 LysR substrate binding domain NRZ33_14100 PF12563 Hemolytic toxin N terminal NRZ33_14100 PF07968 Leukocidin/Hemolysin toxin family NRZ33_14105 PF00877 NlpC/P60 family NRZ33_14115 PF00171 Aldehyde dehydrogenase family NRZ33_14120 PF00440 Bacterial regulatory proteins, tetR family NRZ33_14120 PF08359 YsiA-like protein, C-terminal region NRZ33_14130 PF00465 Iron-containing alcohol dehydrogenase NRZ33_14140 PF00291 Pyridoxal-phosphate dependent enzyme NRZ33_14160 PF01554 MatE NRZ33_14185 PF10371 Domain of unknown function NRZ33_14185 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NRZ33_14185 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NRZ33_14185 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NRZ33_14185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRZ33_14190 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NRZ33_14190 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ33_14190 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NRZ33_14195 PF03473 MOSC domain NRZ33_14195 PF00111 2Fe-2S iron-sulfur cluster binding domain NRZ33_14195 PF00111 2Fe-2S iron-sulfur cluster binding domain NRZ33_14195 PF03473 MOSC domain NRZ33_14195 PF03476 MOSC N-terminal beta barrel domain NRZ33_14195 PF03476 MOSC N-terminal beta barrel domain NRZ33_14200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_14200 PF13426 PAS domain NRZ33_14200 PF08447 PAS fold NRZ33_14205 PF01435 Peptidase family M48 NRZ33_14215 PF08241 Methyltransferase domain NRZ33_14215 PF12697 Alpha/beta hydrolase family NRZ33_14220 PF00155 Aminotransferase class I and II NRZ33_14225 PF04055 Radical SAM superfamily NRZ33_14225 PF06968 Biotin and Thiamin Synthesis associated domain NRZ33_14230 PF00202 Aminotransferase class-III NRZ33_14245 PF00152 tRNA synthetases class II (D, K and N) NRZ33_14245 PF01336 OB-fold nucleic acid binding domain NRZ33_14250 PF03605 Anaerobic c4-dicarboxylate membrane transporter NRZ33_14260 PF01546 Peptidase family M20/M25/M40 NRZ33_14260 PF07687 Peptidase dimerisation domain NRZ33_14265 PF03606 C4-dicarboxylate anaerobic carrier NRZ33_14275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_14275 PF03466 LysR substrate binding domain NRZ33_14280 PF03960 ArsC family NRZ33_14285 PF07687 Peptidase dimerisation domain NRZ33_14285 PF01546 Peptidase family M20/M25/M40 NRZ33_14290 PF02557 D-alanyl-D-alanine carboxypeptidase NRZ33_14300 PF03471 Transporter associated domain NRZ33_14300 PF00999 Sodium/hydrogen exchanger family NRZ33_14300 PF02080 TrkA-C domain NRZ33_14310 PF03471 Transporter associated domain NRZ33_14310 PF00999 Sodium/hydrogen exchanger family NRZ33_14310 PF02080 TrkA-C domain NRZ33_14320 PF01810 LysE type translocator NRZ33_14325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_14325 PF00672 HAMP domain NRZ33_14330 PF07509 Protein of unknown function (DUF1523) NRZ33_14345 PF01156 Inosine-uridine preferring nucleoside hydrolase NRZ33_14350 PF00849 RNA pseudouridylate synthase NRZ33_14355 PF01048 Phosphorylase superfamily NRZ33_14360 PF00465 Iron-containing alcohol dehydrogenase NRZ33_14395 PF00437 Type II/IV secretion system protein NRZ33_14410 PF04972 BON domain NRZ33_14410 PF00263 Bacterial type II and III secretion system protein NRZ33_14410 PF13629 Pilus formation protein N terminal region NRZ33_14440 PF04355 SmpA / OmlA family NRZ33_14445 PF13460 NAD(P)H-binding NRZ33_14450 PF03658 RnfH family Ubiquitin NRZ33_14455 PF03364 Polyketide cyclase / dehydrase and lipid transport NRZ33_14460 PF01668 SmpB protein NRZ33_14470 PF00271 Helicase conserved C-terminal domain NRZ33_14470 PF04851 Type III restriction enzyme, res subunit NRZ33_14470 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) NRZ33_14470 PF08463 EcoEI R protein C-terminal NRZ33_14475 PF02384 N-6 DNA Methylase NRZ33_14475 PF12161 HsdM N-terminal domain NRZ33_14480 PF01420 Type I restriction modification DNA specificity domain NRZ33_14510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_14510 PF03466 LysR substrate binding domain NRZ33_14515 PF02447 GntP family permease NRZ33_14520 PF00291 Pyridoxal-phosphate dependent enzyme NRZ33_14530 PF00180 Isocitrate/isopropylmalate dehydrogenase NRZ33_14535 PF12833 Helix-turn-helix domain NRZ33_14540 PF01238 Phosphomannose isomerase type I NRZ33_14570 PF00155 Aminotransferase class I and II NRZ33_14575 PF00367 phosphotransferase system, EIIB NRZ33_14575 PF02378 Phosphotransferase system, EIIC NRZ33_14580 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRZ33_14580 PF00356 Bacterial regulatory proteins, lacI family NRZ33_14610 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRZ33_14610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRZ33_14610 PF02378 Phosphotransferase system, EIIC NRZ33_14615 PF09013 YopH, N-terminal NRZ33_14625 PF07690 Major Facilitator Superfamily NRZ33_14630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRZ33_14630 PF02378 Phosphotransferase system, EIIC NRZ33_14630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRZ33_14640 PF00849 RNA pseudouridylate synthase NRZ33_14645 PF00293 NUDIX domain NRZ33_14655 PF04356 Protein of unknown function (DUF489) NRZ33_14660 PF00206 Lyase NRZ33_14660 PF08328 Adenylosuccinate lyase C-terminal NRZ33_14665 PF08007 Cupin superfamily protein NRZ33_14670 PF13508 Acetyltransferase (GNAT) domain NRZ33_14680 PF02798 Glutathione S-transferase, N-terminal domain NRZ33_14685 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NRZ33_14685 PF01243 Pyridoxamine 5'-phosphate oxidase NRZ33_14700 PF01189 16S rRNA methyltransferase RsmB/F NRZ33_14700 PF01029 NusB family NRZ33_14705 PF00462 Glutaredoxin NRZ33_14710 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NRZ33_14710 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NRZ33_14715 PF04333 MlaA lipoprotein NRZ33_14720 PF03918 Cytochrome C biogenesis protein NRZ33_14725 PF03918 Cytochrome C biogenesis protein NRZ33_14730 PF08534 Redoxin NRZ33_14735 PF01578 Cytochrome C assembly protein NRZ33_14735 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NRZ33_14740 PF03100 CcmE NRZ33_14745 PF04995 Heme exporter protein D (CcmD) NRZ33_14750 PF01578 Cytochrome C assembly protein NRZ33_14755 PF03379 CcmB protein NRZ33_14760 PF00005 ABC transporter NRZ33_14770 PF01584 CheW-like domain NRZ33_14780 PF13614 AAA domain NRZ33_14785 PF00691 OmpA family NRZ33_14785 PF13677 Membrane MotB of proton-channel complex MotA/MotB NRZ33_14790 PF01618 MotA/TolQ/ExbB proton channel family NRZ33_14795 PF01339 CheB methylesterase NRZ33_14795 PF00072 Response regulator receiver domain NRZ33_14800 PF00072 Response regulator receiver domain NRZ33_14800 PF01627 Hpt domain NRZ33_14800 PF02895 Signal transducing histidine kinase, homodimeric domain NRZ33_14800 PF01584 CheW-like domain NRZ33_14800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_14805 PF04344 Chemotaxis phosphatase, CheZ NRZ33_14810 PF00072 Response regulator receiver domain NRZ33_14815 PF04542 Sigma-70 region 2 NRZ33_14815 PF04539 Sigma-70 region 3 NRZ33_14815 PF04545 Sigma-70, region 4 NRZ33_14820 PF10609 NUBPL iron-transfer P-loop NTPase NRZ33_14825 PF00448 SRP54-type protein, GTPase domain NRZ33_14830 PF00771 FHIPEP family NRZ33_14835 PF01312 FlhB HrpN YscU SpaS Family NRZ33_14840 PF01311 Bacterial export proteins, family 1 NRZ33_14845 PF01313 Bacterial export proteins, family 3 NRZ33_14850 PF00813 FliP family NRZ33_14855 PF04347 Flagellar biosynthesis protein, FliO NRZ33_14860 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NRZ33_14865 PF02154 Flagellar motor switch protein FliM NRZ33_14865 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NRZ33_14885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRZ33_14885 PF18269 T3SS EscN ATPase C-terminal domain NRZ33_14895 PF01706 FliG C-terminal domain NRZ33_14895 PF14841 FliG middle domain NRZ33_14895 PF14842 FliG N-terminal domain NRZ33_14900 PF01514 Secretory protein of YscJ/FliF family NRZ33_14900 PF08345 Flagellar M-ring protein C-terminal NRZ33_14905 PF02049 Flagellar hook-basal body complex protein FliE NRZ33_14915 PF00072 Response regulator receiver domain NRZ33_14920 PF18693 TRAM domain NRZ33_14920 PF04055 Radical SAM superfamily NRZ33_14920 PF00919 Uncharacterized protein family UPF0004 NRZ33_14930 PF11647 Membrane Localization Domain NRZ33_14930 PF12146 Serine aminopeptidase, S33 NRZ33_14930 PF16671 Actin cross-linking domain NRZ33_14930 PF07634 RtxA repeat NRZ33_14930 PF11713 Peptidase C80 family NRZ33_14935 PF02794 RTX toxin acyltransferase family NRZ33_14945 PF00664 ABC transporter transmembrane region NRZ33_14945 PF00005 ABC transporter NRZ33_14945 PF03412 Peptidase C39 family NRZ33_14955 PF00664 ABC transporter transmembrane region NRZ33_14955 PF00005 ABC transporter NRZ33_14955 PF03412 Peptidase C39 family NRZ33_14960 PF00486 Transcriptional regulatory protein, C terminal NRZ33_14960 PF00072 Response regulator receiver domain NRZ33_14965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_14970 PF02685 Glucokinase NRZ33_14975 PF01418 Helix-turn-helix domain, rpiR family NRZ33_14975 PF01380 SIS domain NRZ33_14980 PF00224 Pyruvate kinase, barrel domain NRZ33_14980 PF02887 Pyruvate kinase, alpha/beta domain NRZ33_14990 PF00873 AcrB/AcrD/AcrF family NRZ33_14995 PF09317 Domain of unknown function (DUF1974) NRZ33_14995 PF02770 Acyl-CoA dehydrogenase, middle domain NRZ33_14995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRZ33_14995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRZ33_15000 PF00440 Bacterial regulatory proteins, tetR family NRZ33_15015 PF00384 Molybdopterin oxidoreductase NRZ33_15020 PF02634 FdhD/NarQ family NRZ33_15025 PF03466 LysR substrate binding domain NRZ33_15025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_15045 PF00936 BMC domain NRZ33_15050 PF00936 BMC domain NRZ33_15055 PF00936 BMC domain NRZ33_15060 PF00171 Aldehyde dehydrogenase family NRZ33_15060 PF00465 Iron-containing alcohol dehydrogenase NRZ33_15070 PF00465 Iron-containing alcohol dehydrogenase NRZ33_15070 PF00171 Aldehyde dehydrogenase family NRZ33_15075 PF01228 Glycine radical NRZ33_15075 PF02901 Pyruvate formate lyase-like NRZ33_15080 PF13187 4Fe-4S dicluster domain NRZ33_15080 PF04055 Radical SAM superfamily NRZ33_15085 PF00936 BMC domain NRZ33_15090 PF06130 Phosphate propanoyltransferase NRZ33_15100 PF00893 Small Multidrug Resistance protein NRZ33_15105 PF00893 Small Multidrug Resistance protein NRZ33_15110 PF00672 HAMP domain NRZ33_15110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_15110 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_15110 PF13426 PAS domain NRZ33_15115 PF00072 Response regulator receiver domain NRZ33_15115 PF00486 Transcriptional regulatory protein, C terminal NRZ33_15120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ33_15120 PF00529 HlyD membrane-fusion protein of T1SS NRZ33_15125 PF00873 AcrB/AcrD/AcrF family NRZ33_15135 PF03734 L,D-transpeptidase catalytic domain NRZ33_15135 PF01476 LysM domain NRZ33_15135 PF17969 L,D-transpeptidase C-terminal domain NRZ33_15145 PF01575 MaoC like domain NRZ33_15150 PF05971 RNA methyltransferase NRZ33_15155 PF00877 NlpC/P60 family NRZ33_15160 PF01648 4'-phosphopantetheinyl transferase superfamily NRZ33_15165 PF00085 Thioredoxin NRZ33_15175 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NRZ33_15180 PF01842 ACT domain NRZ33_15180 PF00551 Formyl transferase NRZ33_15190 PF13396 Phospholipase_D-nuclease N-terminal NRZ33_15190 PF13091 PLD-like domain NRZ33_15195 PF07273 Protein of unknown function (DUF1439) NRZ33_15205 PF01551 Peptidase family M23 NRZ33_15210 PF00128 Alpha amylase, catalytic domain NRZ33_15215 PF01464 Transglycosylase SLT domain NRZ33_15215 PF10145 Phage-related minor tail protein NRZ33_15215 PF01551 Peptidase family M23 NRZ33_15220 PF00230 Major intrinsic protein NRZ33_15225 PF02075 Crossover junction endodeoxyribonuclease RuvC NRZ33_15230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRZ33_15250 PF05656 Protein of unknown function (DUF805) NRZ33_15255 PF12833 Helix-turn-helix domain NRZ33_15285 PF00171 Aldehyde dehydrogenase family NRZ33_15295 PF01810 LysE type translocator NRZ33_15305 PF11842 Domain of unknown function (DUF3362) NRZ33_15305 PF04055 Radical SAM superfamily NRZ33_15305 PF08497 Radical SAM N-terminal NRZ33_15315 PF00873 AcrB/AcrD/AcrF family NRZ33_15320 PF00529 HlyD membrane-fusion protein of T1SS NRZ33_15320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ33_15325 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_15330 PF01734 Patatin-like phospholipase NRZ33_15335 PF00209 Sodium:neurotransmitter symporter family NRZ33_15350 PF00691 OmpA family NRZ33_15350 PF01389 OmpA-like transmembrane domain NRZ33_15355 PF00691 OmpA family NRZ33_15355 PF01389 OmpA-like transmembrane domain NRZ33_15360 PF01389 OmpA-like transmembrane domain NRZ33_15360 PF00691 OmpA family NRZ33_15365 PF03949 Malic enzyme, NAD binding domain NRZ33_15365 PF00390 Malic enzyme, N-terminal domain NRZ33_15370 PF12833 Helix-turn-helix domain NRZ33_15375 PF01554 MatE NRZ33_15380 PF10692 Protein of unknown function (DUF2498) NRZ33_15385 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_15385 PF00072 Response regulator receiver domain NRZ33_15390 PF00860 Permease family NRZ33_15400 PF01235 Sodium:alanine symporter family NRZ33_15405 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NRZ33_15405 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NRZ33_15410 PF01699 Sodium/calcium exchanger protein NRZ33_15415 PF08534 Redoxin NRZ33_15425 PF00293 NUDIX domain NRZ33_15445 PF00005 ABC transporter NRZ33_15450 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NRZ33_15450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRZ33_15455 PF03932 CutC family NRZ33_15460 PF00480 ROK family NRZ33_15470 PF01435 Peptidase family M48 NRZ33_15475 PF12849 PBP superfamily domain NRZ33_15480 PF11808 Phosphate regulon sensor protein PhoR NRZ33_15480 PF00989 PAS fold NRZ33_15480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_15480 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_15485 PF00072 Response regulator receiver domain NRZ33_15485 PF00486 Transcriptional regulatory protein, C terminal NRZ33_15490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRZ33_15495 PF02515 CoA-transferase family III NRZ33_15500 PF02770 Acyl-CoA dehydrogenase, middle domain NRZ33_15500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRZ33_15500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRZ33_15505 PF01590 GAF domain NRZ33_15505 PF02954 Bacterial regulatory protein, Fis family NRZ33_15505 PF00158 Sigma-54 interaction domain NRZ33_15510 PF00171 Aldehyde dehydrogenase family NRZ33_15520 PF00892 EamA-like transporter family NRZ33_15525 PF00072 Response regulator receiver domain NRZ33_15525 PF12431 Transcriptional regulator NRZ33_15530 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NRZ33_15530 PF17203 Single cache domain 3 NRZ33_15530 PF00989 PAS fold NRZ33_15530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_15535 PF00390 Malic enzyme, N-terminal domain NRZ33_15535 PF03949 Malic enzyme, NAD binding domain NRZ33_15540 PF03390 2-hydroxycarboxylate transporter family NRZ33_15550 PF01047 MarR family NRZ33_15555 PF00529 HlyD membrane-fusion protein of T1SS NRZ33_15555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ33_15580 PF01679 Proteolipid membrane potential modulator NRZ33_15590 PF13597 Anaerobic ribonucleoside-triphosphate reductase NRZ33_15590 PF03477 ATP cone domain NRZ33_15600 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NRZ33_15600 PF03120 NAD-dependent DNA ligase OB-fold domain NRZ33_15600 PF01653 NAD-dependent DNA ligase adenylation domain NRZ33_15600 PF12826 Helix-hairpin-helix motif NRZ33_15600 PF00533 BRCA1 C Terminus (BRCT) domain NRZ33_15605 PF04354 ZipA, C-terminal FtsZ-binding domain NRZ33_15610 PF06470 SMC proteins Flexible Hinge Domain NRZ33_15610 PF02463 RecF/RecN/SMC N terminal domain NRZ33_15620 PF03458 UPF0126 domain NRZ33_15630 PF05951 Bacterial protein of unknown function (DUF882) NRZ33_15635 PF01471 Putative peptidoglycan binding domain NRZ33_15635 PF03734 L,D-transpeptidase catalytic domain NRZ33_15650 PF00535 Glycosyl transferase family 2 NRZ33_15665 PF00128 Alpha amylase, catalytic domain NRZ33_15675 PF00072 Response regulator receiver domain NRZ33_15675 PF00196 Bacterial regulatory proteins, luxR family NRZ33_15700 PF02254 TrkA-N domain NRZ33_15700 PF02080 TrkA-C domain NRZ33_15700 PF00999 Sodium/hydrogen exchanger family NRZ33_15705 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_15710 PF01171 PP-loop family NRZ33_15710 PF09179 TilS substrate binding domain NRZ33_15710 PF11734 TilS substrate C-terminal domain NRZ33_15715 PF05649 Peptidase family M13 NRZ33_15715 PF01431 Peptidase family M13 NRZ33_15725 PF12848 ABC transporter NRZ33_15725 PF00005 ABC transporter NRZ33_15735 PF13520 Amino acid permease NRZ33_15745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_15745 PF03466 LysR substrate binding domain NRZ33_15755 PF08543 Phosphomethylpyrimidine kinase NRZ33_15760 PF01276 Orn/Lys/Arg decarboxylase, major domain NRZ33_15760 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NRZ33_15760 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain NRZ33_15765 PF13520 Amino acid permease NRZ33_15770 PF18500 CadC C-terminal domain 1 NRZ33_15770 PF00486 Transcriptional regulatory protein, C terminal NRZ33_15775 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NRZ33_15780 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NRZ33_15780 PF14579 Helix-hairpin-helix motif NRZ33_15780 PF02811 PHP domain NRZ33_15780 PF01336 OB-fold nucleic acid binding domain NRZ33_15780 PF07733 Bacterial DNA polymerase III alpha NTPase domain NRZ33_15785 PF01351 Ribonuclease HII NRZ33_15790 PF02684 Lipid-A-disaccharide synthetase NRZ33_15795 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NRZ33_15795 PF00132 Bacterial transferase hexapeptide (six repeats) NRZ33_15800 PF07977 FabA-like domain NRZ33_15805 PF00132 Bacterial transferase hexapeptide (six repeats) NRZ33_15805 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NRZ33_15810 PF03938 Outer membrane protein (OmpH-like) NRZ33_15815 PF01103 Surface antigen NRZ33_15815 PF07244 Surface antigen variable number repeat NRZ33_15820 PF02163 Peptidase family M50 NRZ33_15820 PF17820 PDZ domain NRZ33_15825 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NRZ33_15825 PF13288 DXP reductoisomerase C-terminal domain NRZ33_15825 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NRZ33_15835 PF01255 Putative undecaprenyl diphosphate synthase NRZ33_15840 PF01765 Ribosome recycling factor NRZ33_15845 PF00696 Amino acid kinase family NRZ33_15850 PF00889 Elongation factor TS NRZ33_15855 PF00318 Ribosomal protein S2 NRZ33_15860 PF00557 Metallopeptidase family M24 NRZ33_15865 PF01909 Nucleotidyltransferase domain NRZ33_15865 PF01966 HD domain NRZ33_15865 PF01842 ACT domain NRZ33_15865 PF08335 GlnD PII-uridylyltransferase NRZ33_15870 PF14602 Hexapeptide repeat of succinyl-transferase NRZ33_15870 PF00132 Bacterial transferase hexapeptide (six repeats) NRZ33_15870 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NRZ33_15875 PF11944 Protein of unknown function (DUF3461) NRZ33_15880 PF00367 phosphotransferase system, EIIB NRZ33_15880 PF02378 Phosphotransferase system, EIIC NRZ33_15885 PF07148 Maltose operon periplasmic protein precursor (MalM) NRZ33_15890 PF02264 LamB porin NRZ33_15895 PF00258 Flavodoxin NRZ33_15900 PF00849 RNA pseudouridylate synthase NRZ33_15905 PF04287 tRNA pseudouridine synthase C NRZ33_15930 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) NRZ33_15935 PF07348 Syd protein (SUKH-2) NRZ33_15940 PF14489 QueF-like protein NRZ33_15940 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NRZ33_15950 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_15955 PF11892 Domain of unknown function (DUF3412) NRZ33_15955 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NRZ33_15955 PF03641 Possible lysine decarboxylase NRZ33_15960 PF01367 5'-3' exonuclease, C-terminal SAM fold NRZ33_15960 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NRZ33_15965 PF00180 Isocitrate/isopropylmalate dehydrogenase NRZ33_15965 PF18324 Hypothetical protein TT1725 NRZ33_15975 PF01728 FtsJ-like methyltransferase NRZ33_15975 PF18125 RlmM ferredoxin-like domain NRZ33_15980 PF04241 Protein of unknown function (DUF423) NRZ33_15990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_15990 PF03466 LysR substrate binding domain NRZ33_15995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_15995 PF00672 HAMP domain NRZ33_16000 PF11798 IMS family HHH motif NRZ33_16000 PF11799 impB/mucB/samB family C-terminal domain NRZ33_16000 PF00817 impB/mucB/samB family NRZ33_16015 PF02424 ApbE family NRZ33_16020 PF00175 Oxidoreductase NAD-binding domain NRZ33_16020 PF00111 2Fe-2S iron-sulfur cluster binding domain NRZ33_16020 PF00970 Oxidoreductase FAD-binding domain NRZ33_16025 PF02508 Rnf-Nqr subunit, membrane protein NRZ33_16030 PF02508 Rnf-Nqr subunit, membrane protein NRZ33_16035 PF04205 FMN-binding domain NRZ33_16040 PF03116 NQR2, RnfD, RnfE family NRZ33_16045 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) NRZ33_16045 PF11973 NQRA C-terminal domain NRZ33_16050 PF01722 BolA-like protein NRZ33_16055 PF05175 Methyltransferase small domain NRZ33_16065 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NRZ33_16075 PF07690 Major Facilitator Superfamily NRZ33_16080 PF03502 Nucleoside-specific channel-forming protein, Tsx NRZ33_16085 PF04461 Protein of unknown function (DUF520) NRZ33_16090 PF02558 Ketopantoate reductase PanE/ApbA NRZ33_16090 PF08546 Ketopantoate reductase PanE/ApbA C terminal NRZ33_16095 PF01965 DJ-1/PfpI family NRZ33_16100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRZ33_16100 PF00205 Thiamine pyrophosphate enzyme, central domain NRZ33_16100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NRZ33_16105 PF03306 Alpha-acetolactate decarboxylase NRZ33_16110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_16110 PF03466 LysR substrate binding domain NRZ33_16140 PF03534 Salmonella virulence plasmid 65kDa B protein NRZ33_16140 PF03496 ADP-ribosyltransferase exoenzyme NRZ33_16155 PF05638 Type VI secretion system effector, Hcp NRZ33_16160 PF03472 Autoinducer binding domain NRZ33_16160 PF00196 Bacterial regulatory proteins, luxR family NRZ33_16170 PF06965 Na+/H+ antiporter 1 NRZ33_16170 PF13462 Thioredoxin NRZ33_16175 PF16363 GDP-mannose 4,6 dehydratase NRZ33_16180 PF00970 Oxidoreductase FAD-binding domain NRZ33_16180 PF00042 Globin NRZ33_16180 PF00175 Oxidoreductase NAD-binding domain NRZ33_16185 PF03063 Prismane/CO dehydrogenase family NRZ33_16190 PF00210 Ferritin-like domain NRZ33_16230 PF00106 short chain dehydrogenase NRZ33_16240 PF03441 FAD binding domain of DNA photolyase NRZ33_16240 PF00875 DNA photolyase NRZ33_16245 PF13411 MerR HTH family regulatory protein NRZ33_16250 PF08349 Protein of unknown function (DUF1722) NRZ33_16280 PF01817 Chorismate mutase type II NRZ33_16280 PF00800 Prephenate dehydratase NRZ33_16310 PF09588 YqaJ-like viral recombinase domain NRZ33_16355 PF04002 RadC-like JAB domain NRZ33_16390 PF09313 Domain of unknown function (DUF1971) NRZ33_16390 PF03848 Tellurite resistance protein TehB NRZ33_16395 PF04471 Restriction endonuclease NRZ33_16395 PF14338 Mrr N-terminal domain NRZ33_16415 PF00717 Peptidase S24-like NRZ33_16420 PF13438 Domain of unknown function (DUF4113) NRZ33_16420 PF00817 impB/mucB/samB family NRZ33_16420 PF11799 impB/mucB/samB family C-terminal domain NRZ33_16420 PF11798 IMS family HHH motif NRZ33_16425 PF02661 Fic/DOC family NRZ33_16425 PF13784 Fic/DOC family N-terminal NRZ33_16450 PF00455 DeoR C terminal sensor domain NRZ33_16450 PF08220 DeoR-like helix-turn-helix domain NRZ33_16455 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NRZ33_16455 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NRZ33_16460 PF17042 Nucleotide-binding C-terminal domain NRZ33_16460 PF07005 Sugar-binding N-terminal domain NRZ33_16465 PF00596 Class II Aldolase and Adducin N-terminal domain NRZ33_16470 PF01261 Xylose isomerase-like TIM barrel NRZ33_16475 PF01370 NAD dependent epimerase/dehydratase family NRZ33_16480 PF02447 GntP family permease NRZ33_16490 PF02743 Cache domain NRZ33_16490 PF00672 HAMP domain NRZ33_16490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_16495 PF03573 outer membrane porin, OprD family NRZ33_16500 PF00106 short chain dehydrogenase NRZ33_16525 PF02074 Carboxypeptidase Taq (M32) metallopeptidase NRZ33_16535 PF02805 Metal binding domain of Ada NRZ33_16535 PF00730 HhH-GPD superfamily base excision DNA repair protein NRZ33_16535 PF12833 Helix-turn-helix domain NRZ33_16535 PF06029 AlkA N-terminal domain NRZ33_16540 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NRZ33_16540 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NRZ33_16545 PF12392 Collagenase NRZ33_16545 PF01136 Peptidase family U32 NRZ33_16550 PF01810 LysE type translocator NRZ33_16555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_16555 PF03466 LysR substrate binding domain NRZ33_16560 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NRZ33_16560 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NRZ33_16565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_16565 PF00672 HAMP domain NRZ33_16565 PF02743 Cache domain NRZ33_16570 PF00072 Response regulator receiver domain NRZ33_16580 PF09078 CheY binding NRZ33_16580 PF01584 CheW-like domain NRZ33_16580 PF01627 Hpt domain NRZ33_16580 PF02895 Signal transducing histidine kinase, homodimeric domain NRZ33_16580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_16585 PF12729 Four helix bundle sensory module for signal transduction NRZ33_16585 PF00672 HAMP domain NRZ33_16585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_16590 PF01584 CheW-like domain NRZ33_16595 PF00672 HAMP domain NRZ33_16595 PF02203 Tar ligand binding domain homologue NRZ33_16595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_16600 PF01739 CheR methyltransferase, SAM binding domain NRZ33_16600 PF03705 CheR methyltransferase, all-alpha domain NRZ33_16605 PF03975 CheD chemotactic sensory transduction NRZ33_16610 PF01339 CheB methylesterase NRZ33_16610 PF00072 Response regulator receiver domain NRZ33_16615 PF00266 Aminotransferase class-V NRZ33_16640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_16640 PF00072 Response regulator receiver domain NRZ33_16640 PF00989 PAS fold NRZ33_16640 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ33_16640 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_16640 PF01627 Hpt domain NRZ33_16645 PF00196 Bacterial regulatory proteins, luxR family NRZ33_16645 PF00072 Response regulator receiver domain NRZ33_16655 PF15976 CS1-pili formation C-terminal NRZ33_16655 PF16967 E-set like domain NRZ33_16670 PF00563 EAL domain NRZ33_16670 PF01590 GAF domain NRZ33_16670 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_16670 PF00989 PAS fold NRZ33_16675 PF01136 Peptidase family U32 NRZ33_16675 PF16325 Peptidase family U32 C-terminal domain NRZ33_16680 PF12838 4Fe-4S dicluster domain NRZ33_16690 PF00842 Alanine racemase, C-terminal domain NRZ33_16690 PF01168 Alanine racemase, N-terminal domain NRZ33_16695 PF03796 DnaB-like helicase C terminal domain NRZ33_16695 PF00772 DnaB-like helicase N terminal domain NRZ33_16705 PF00563 EAL domain NRZ33_16705 PF12792 CSS motif domain associated with EAL NRZ33_16710 PF02872 5'-nucleotidase, C-terminal domain NRZ33_16710 PF00149 Calcineurin-like phosphoesterase NRZ33_16730 PF02954 Bacterial regulatory protein, Fis family NRZ33_16730 PF00072 Response regulator receiver domain NRZ33_16730 PF00158 Sigma-54 interaction domain NRZ33_16735 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NRZ33_16735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRZ33_16745 PF04102 SlyX NRZ33_16750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRZ33_16755 PF09526 Probable metal-binding protein (DUF2387) NRZ33_16765 PF00072 Response regulator receiver domain NRZ33_16765 PF01584 CheW-like domain NRZ33_16770 PF00561 alpha/beta hydrolase fold NRZ33_16775 PF00360 Phytochrome region NRZ33_16775 PF01590 GAF domain NRZ33_16775 PF00563 EAL domain NRZ33_16775 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_16780 PF06794 Uncharacterised protein family (UPF0270) NRZ33_16785 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NRZ33_16785 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NRZ33_16785 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NRZ33_16790 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NRZ33_16795 PF00535 Glycosyl transferase family 2 NRZ33_16800 PF00551 Formyl transferase NRZ33_16800 PF01370 NAD dependent epimerase/dehydratase family NRZ33_16800 PF02911 Formyl transferase, C-terminal domain NRZ33_16805 PF01522 Polysaccharide deacetylase NRZ33_16810 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NRZ33_16815 PF00892 EamA-like transporter family NRZ33_16820 PF00893 Small Multidrug Resistance protein NRZ33_16825 PF00485 Phosphoribulokinase / Uridine kinase family NRZ33_16840 PF02566 OsmC-like protein NRZ33_16845 PF00027 Cyclic nucleotide-binding domain NRZ33_16845 PF13545 Crp-like helix-turn-helix domain NRZ33_16850 PF13847 Methyltransferase domain NRZ33_16855 PF18416 N-acetylglucosamine binding protein domain 2 NRZ33_16855 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NRZ33_16860 PF17945 Beta/Gamma crystallin NRZ33_16860 PF12561 ToxR activated gene A lipoprotein domain NRZ33_16865 PF00704 Glycosyl hydrolases family 18 NRZ33_16865 PF08329 Chitinase A, N-terminal domain NRZ33_16870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_16870 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_16870 PF00989 PAS fold NRZ33_16880 PF13443 Cro/C1-type HTH DNA-binding domain NRZ33_16885 PF12832 MFS_1 like family NRZ33_16890 PF00593 TonB dependent receptor NRZ33_16890 PF07715 TonB-dependent Receptor Plug Domain NRZ33_16910 PF01243 Pyridoxamine 5'-phosphate oxidase NRZ33_16915 PF06228 Haem utilisation ChuX/HutX NRZ33_16925 PF01032 FecCD transport family NRZ33_16930 PF00005 ABC transporter NRZ33_16940 PF01370 NAD dependent epimerase/dehydratase family NRZ33_16950 PF01791 DeoC/LacD family aldolase NRZ33_16955 PF07662 Na+ dependent nucleoside transporter C-terminus NRZ33_16955 PF07670 Nucleoside recognition NRZ33_16955 PF01773 Na+ dependent nucleoside transporter N-terminus NRZ33_16960 PF01048 Phosphorylase superfamily NRZ33_16965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_16965 PF03466 LysR substrate binding domain NRZ33_16980 PF01464 Transglycosylase SLT domain NRZ33_16985 PF01048 Phosphorylase superfamily NRZ33_17000 PF00005 ABC transporter NRZ33_17000 PF12848 ABC transporter NRZ33_17010 PF00860 Permease family NRZ33_17015 PF00226 DnaJ domain NRZ33_17015 PF05099 Tellurite resistance protein TerB NRZ33_17020 PF00483 Nucleotidyl transferase NRZ33_17025 PF01636 Phosphotransferase enzyme family NRZ33_17030 PF04453 LPS transport system D NRZ33_17030 PF03968 OstA-like protein NRZ33_17035 PF00639 PPIC-type PPIASE domain NRZ33_17035 PF09312 SurA N-terminal domain NRZ33_17040 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NRZ33_17045 PF00398 Ribosomal RNA adenine dimethylase NRZ33_17050 PF04379 ApaG domain NRZ33_17055 PF00149 Calcineurin-like phosphoesterase NRZ33_17065 PF00296 Luciferase-like monooxygenase NRZ33_17085 PF13193 AMP-binding enzyme C-terminal domain NRZ33_17085 PF00501 AMP-binding enzyme NRZ33_17090 PF07670 Nucleoside recognition NRZ33_17095 PF01018 GTP1/OBG NRZ33_17095 PF01926 50S ribosome-binding GTPase NRZ33_17100 PF01016 Ribosomal L27 protein NRZ33_17105 PF00829 Ribosomal prokaryotic L21 protein NRZ33_17110 PF00348 Polyprenyl synthetase NRZ33_17115 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) NRZ33_17120 PF01145 SPFH domain / Band 7 family NRZ33_17125 PF01145 SPFH domain / Band 7 family NRZ33_17125 PF12221 Bacterial membrane protein N terminal NRZ33_17130 PF16360 GTP-binding GTPase Middle Region NRZ33_17130 PF13167 GTP-binding GTPase N-terminal NRZ33_17130 PF01926 50S ribosome-binding GTPase NRZ33_17135 PF17209 Hfq protein NRZ33_17145 PF08676 MutL C terminal dimerisation domain NRZ33_17145 PF01119 DNA mismatch repair protein, C-terminal domain NRZ33_17150 PF01520 N-acetylmuramoyl-L-alanine amidase NRZ33_17155 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NRZ33_17160 PF03853 YjeF-related protein N-terminus NRZ33_17160 PF01256 Carbohydrate kinase NRZ33_17165 PF08331 Domain of unknown function (DUF1730) NRZ33_17170 PF00480 ROK family NRZ33_17180 PF00005 ABC transporter NRZ33_17180 PF09383 NIL domain NRZ33_17185 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_17190 PF03180 NLPA lipoprotein NRZ33_17195 PF02357 Transcription termination factor nusG NRZ33_17210 PF12729 Four helix bundle sensory module for signal transduction NRZ33_17210 PF00672 HAMP domain NRZ33_17210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_17215 PF03707 Bacterial signalling protein N terminal repeat NRZ33_17215 PF00563 EAL domain NRZ33_17215 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_17220 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_17220 PF00072 Response regulator receiver domain NRZ33_17220 PF09456 RcsC Alpha-Beta-Loop (ABL) NRZ33_17220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_17230 PF13286 Phosphohydrolase-associated domain NRZ33_17230 PF01966 HD domain NRZ33_17235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_17235 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_17235 PF18415 Histidine kinase receptor ArcB trans-membrane domain NRZ33_17235 PF01627 Hpt domain NRZ33_17235 PF00989 PAS fold NRZ33_17235 PF00072 Response regulator receiver domain NRZ33_17255 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NRZ33_17260 PF03466 LysR substrate binding domain NRZ33_17260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_17270 PF01259 SAICAR synthetase NRZ33_17275 PF06804 NlpB/DapX lipoprotein NRZ33_17280 PF00701 Dihydrodipicolinate synthetase family NRZ33_17285 PF01842 ACT domain NRZ33_17290 PF00578 AhpC/TSA family NRZ33_17295 PF03887 YfbU domain NRZ33_17300 PF04217 Protein of unknown function, DUF412 NRZ33_17305 PF00871 Acetokinase family NRZ33_17310 PF01515 Phosphate acetyl/butaryl transferase NRZ33_17310 PF07085 DRTGG domain NRZ33_17315 PF10369 Small subunit of acetolactate synthase NRZ33_17320 PF00205 Thiamine pyrophosphate enzyme, central domain NRZ33_17320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRZ33_17320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NRZ33_17330 PF03033 Glycosyltransferase family 28 N-terminal domain NRZ33_17330 PF04101 Glycosyltransferase family 28 C-terminal domain NRZ33_17335 PF01569 PAP2 superfamily NRZ33_17345 PF00682 HMGL-like NRZ33_17345 PF08502 LeuA allosteric (dimerisation) domain NRZ33_17350 PF00180 Isocitrate/isopropylmalate dehydrogenase NRZ33_17355 PF00330 Aconitase family (aconitate hydratase) NRZ33_17360 PF00694 Aconitase C-terminal domain NRZ33_17380 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_17385 PF00005 ABC transporter NRZ33_17390 PF13638 PIN domain NRZ33_17390 PF02562 PhoH-like protein NRZ33_17400 PF02867 Ribonucleotide reductase, barrel domain NRZ33_17400 PF00317 Ribonucleotide reductase, all-alpha domain NRZ33_17400 PF08343 Ribonucleotide reductase N-terminal NRZ33_17430 PF18337 RapA N-terminal Tudor like domain NRZ33_17430 PF18339 RapA N-terminal Tudor like domain 1 NRZ33_17430 PF00176 SNF2 family N-terminal domain NRZ33_17430 PF12137 RNA polymerase recycling family C-terminal NRZ33_17430 PF00271 Helicase conserved C-terminal domain NRZ33_17435 PF00849 RNA pseudouridylate synthase NRZ33_17445 PF03707 Bacterial signalling protein N terminal repeat NRZ33_17445 PF13188 PAS domain NRZ33_17445 PF00563 EAL domain NRZ33_17445 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_17455 PF00118 TCP-1/cpn60 chaperonin family NRZ33_17460 PF00166 Chaperonin 10 Kd subunit NRZ33_17465 PF01554 MatE NRZ33_17470 PF04186 FxsA cytoplasmic membrane protein NRZ33_17475 PF10415 Fumarase C C-terminus NRZ33_17475 PF00206 Lyase NRZ33_17480 PF03605 Anaerobic c4-dicarboxylate membrane transporter NRZ33_17485 PF00267 Gram-negative porin NRZ33_17490 PF07690 Major Facilitator Superfamily NRZ33_17495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_17495 PF03466 LysR substrate binding domain NRZ33_17500 PF07504 Fungalysin/Thermolysin Propeptide Motif NRZ33_17500 PF04151 Bacterial pre-peptidase C-terminal domain NRZ33_17500 PF02868 Thermolysin metallopeptidase, alpha-helical domain NRZ33_17500 PF01447 Thermolysin metallopeptidase, catalytic domain NRZ33_17500 PF03413 Peptidase propeptide and YPEB domain NRZ33_17505 PF13302 Acetyltransferase (GNAT) domain NRZ33_17510 PF13302 Acetyltransferase (GNAT) domain NRZ33_17520 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NRZ33_17520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRZ33_17525 PF07690 Major Facilitator Superfamily NRZ33_17530 PF01725 Ham1 family NRZ33_17535 PF06969 HemN C-terminal domain NRZ33_17535 PF04055 Radical SAM superfamily NRZ33_17540 PF03889 Alternative ribosome-rescue factor A NRZ33_17545 PF01872 RibD C-terminal domain NRZ33_17550 PF13411 MerR HTH family regulatory protein NRZ33_17555 PF02142 MGS-like domain NRZ33_17555 PF01808 AICARFT/IMPCHase bienzyme NRZ33_17560 PF02843 Phosphoribosylglycinamide synthetase, C domain NRZ33_17560 PF02844 Phosphoribosylglycinamide synthetase, N domain NRZ33_17560 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NRZ33_17575 PF00128 Alpha amylase, catalytic domain NRZ33_17585 PF03979 Sigma-70 factor, region 1.1 NRZ33_17585 PF04545 Sigma-70, region 4 NRZ33_17585 PF04539 Sigma-70 region 3 NRZ33_17585 PF04542 Sigma-70 region 2 NRZ33_17585 PF00140 Sigma-70 factor, region 1.2 NRZ33_17585 PF04546 Sigma-70, non-essential region NRZ33_17590 PF10410 DnaB-helicase binding domain of primase NRZ33_17590 PF08278 DNA primase DnaG DnaB-binding NRZ33_17590 PF08275 DNA primase catalytic core, N-terminal domain NRZ33_17590 PF01807 CHC2 zinc finger NRZ33_17595 PF09424 Yqey-like protein NRZ33_17600 PF01165 Ribosomal protein S21 NRZ33_17605 PF00814 Glycoprotease family NRZ33_17610 PF00140 Sigma-70 factor, region 1.2 NRZ33_17610 PF04542 Sigma-70 region 2 NRZ33_17610 PF04539 Sigma-70 region 3 NRZ33_17610 PF04545 Sigma-70, region 4 NRZ33_17615 PF01476 LysM domain NRZ33_17615 PF01551 Peptidase family M23 NRZ33_17620 PF09335 SNARE associated Golgi protein NRZ33_17630 PF01975 Survival protein SurE NRZ33_17635 PF01142 tRNA pseudouridine synthase D (TruD) NRZ33_17640 PF02542 YgbB family NRZ33_17645 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NRZ33_17650 PF04977 Septum formation initiator NRZ33_17655 PF03952 Enolase, N-terminal domain NRZ33_17655 PF00113 Enolase, C-terminal TIM barrel domain NRZ33_17660 PF06418 CTP synthase N-terminus NRZ33_17660 PF00117 Glutamine amidotransferase class-I NRZ33_17665 PF03819 MazG nucleotide pyrophosphohydrolase domain NRZ33_17670 PF13291 ACT domain NRZ33_17670 PF04607 Region found in RelA / SpoT proteins NRZ33_17670 PF02824 TGS domain NRZ33_17675 PF01938 TRAM domain NRZ33_17675 PF05958 tRNA (Uracil-5-)-methyltransferase NRZ33_17680 PF00672 HAMP domain NRZ33_17680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_17680 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_17680 PF01627 Hpt domain NRZ33_17680 PF00072 Response regulator receiver domain NRZ33_17680 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NRZ33_17685 PF07308 Protein of unknown function (DUF1456) NRZ33_17690 PF01510 N-acetylmuramoyl-L-alanine amidase NRZ33_17695 PF08220 DeoR-like helix-turn-helix domain NRZ33_17695 PF00455 DeoR C terminal sensor domain NRZ33_17700 PF08013 Tagatose 6 phosphate kinase NRZ33_17705 PF01380 SIS domain NRZ33_17710 PF03830 PTS system sorbose subfamily IIB component NRZ33_17715 PF03609 PTS system sorbose-specific iic component NRZ33_17720 PF03613 PTS system mannose/fructose/sorbose family IID component NRZ33_17725 PF03610 PTS system fructose IIA component NRZ33_17730 PF01979 Amidohydrolase family NRZ33_17735 PF01116 Fructose-bisphosphate aldolase class-II NRZ33_17745 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NRZ33_17750 PF11967 Recombination protein O N terminal NRZ33_17750 PF02565 Recombination protein O C terminal NRZ33_17755 PF07650 KH domain NRZ33_17755 PF01926 50S ribosome-binding GTPase NRZ33_17760 PF00035 Double-stranded RNA binding motif NRZ33_17760 PF14622 Ribonuclease-III-like NRZ33_17765 PF10502 Signal peptidase, peptidase S26 NRZ33_17770 PF03144 Elongation factor Tu domain 2 NRZ33_17770 PF00679 Elongation factor G C-terminus NRZ33_17770 PF06421 GTP-binding protein LepA C-terminus NRZ33_17770 PF00009 Elongation factor Tu GTP binding domain NRZ33_17780 PF03888 MucB/RseB N-terminal domain NRZ33_17780 PF17188 MucB/RseB C-terminal domain NRZ33_17785 PF03873 Anti sigma-E protein RseA, C-terminal domain NRZ33_17785 PF03872 Anti sigma-E protein RseA, N-terminal domain NRZ33_17790 PF08281 Sigma-70, region 4 NRZ33_17790 PF04542 Sigma-70 region 2 NRZ33_17795 PF00890 FAD binding domain NRZ33_17795 PF02910 Fumarate reductase flavoprotein C-term NRZ33_17805 PF03937 Flavinator of succinate dehydrogenase NRZ33_17810 PF01571 Aminomethyltransferase folate-binding domain NRZ33_17815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_17815 PF03466 LysR substrate binding domain NRZ33_17830 PF03091 CutA1 divalent ion tolerance protein NRZ33_17835 PF11412 Disulphide bond corrector protein DsbC NRZ33_17835 PF02683 Cytochrome C biogenesis protein transmembrane region NRZ33_17850 PF01266 FAD dependent oxidoreductase NRZ33_17855 PF01116 Fructose-bisphosphate aldolase class-II NRZ33_17860 PF00162 Phosphoglycerate kinase NRZ33_17865 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NRZ33_17865 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NRZ33_17870 PF00480 ROK family NRZ33_17875 PF01208 Uroporphyrinogen decarboxylase (URO-D) NRZ33_17880 PF09297 NADH pyrophosphatase zinc ribbon domain NRZ33_17880 PF00293 NUDIX domain NRZ33_17885 PF14850 DNA-binding domain of Proline dehydrogenase NRZ33_17885 PF00171 Aldehyde dehydrogenase family NRZ33_17885 PF01619 Proline dehydrogenase NRZ33_17885 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NRZ33_17890 PF08239 Bacterial SH3 domain NRZ33_17895 PF00027 Cyclic nucleotide-binding domain NRZ33_17895 PF00520 Ion transport protein NRZ33_17900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_17900 PF00672 HAMP domain NRZ33_17900 PF02743 Cache domain NRZ33_17910 PF03710 Glutamate-ammonia ligase adenylyltransferase NRZ33_17910 PF08335 GlnD PII-uridylyltransferase NRZ33_17935 PF00291 Pyridoxal-phosphate dependent enzyme NRZ33_17940 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_17945 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_17950 PF00005 ABC transporter NRZ33_17955 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ33_17965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ33_17970 PF00486 Transcriptional regulatory protein, C terminal NRZ33_17970 PF00072 Response regulator receiver domain NRZ33_17975 PF16527 Two-component sensor protein CpxA, periplasmic domain NRZ33_17975 PF00672 HAMP domain NRZ33_17975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_17975 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_17980 PF00293 NUDIX domain NRZ33_17980 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NRZ33_17980 PF09297 NADH pyrophosphatase zinc ribbon domain NRZ33_18015 PF03060 Nitronate monooxygenase NRZ33_18025 PF00445 Ribonuclease T2 family NRZ33_18040 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase NRZ33_18055 PF03466 LysR substrate binding domain NRZ33_18055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_18060 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_18065 PF00271 Helicase conserved C-terminal domain NRZ33_18065 PF00270 DEAD/DEAH box helicase NRZ33_18075 PF00753 Metallo-beta-lactamase superfamily NRZ33_18085 PF01425 Amidase NRZ33_18090 PF04371 Porphyromonas-type peptidyl-arginine deiminase NRZ33_18095 PF03466 LysR substrate binding domain NRZ33_18095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_18100 PF04480 Protein of unknown function (DUF559) NRZ33_18110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NRZ33_18115 PF00583 Acetyltransferase (GNAT) family NRZ33_18135 PF03144 Elongation factor Tu domain 2 NRZ33_18135 PF00009 Elongation factor Tu GTP binding domain NRZ33_18135 PF16658 Class II release factor RF3, C-terminal domain NRZ33_18140 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_18140 PF00072 Response regulator receiver domain NRZ33_18145 PF00563 EAL domain NRZ33_18145 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_18145 PF13188 PAS domain NRZ33_18145 PF03707 Bacterial signalling protein N terminal repeat NRZ33_18150 PF05762 VWA domain containing CoxE-like protein NRZ33_18155 PF12592 Protein of unknown function (DUF3763) NRZ33_18155 PF17868 AAA lid domain NRZ33_18155 PF07728 AAA domain (dynein-related subfamily) NRZ33_18165 PF00583 Acetyltransferase (GNAT) family NRZ33_18175 PF00501 AMP-binding enzyme NRZ33_18185 PF04262 Glutamate-cysteine ligase NRZ33_18190 PF05193 Peptidase M16 inactive domain NRZ33_18190 PF00675 Insulinase (Peptidase family M16) NRZ33_18195 PF09335 SNARE associated Golgi protein NRZ33_18200 PF00109 Beta-ketoacyl synthase, N-terminal domain NRZ33_18200 PF02801 Beta-ketoacyl synthase, C-terminal domain NRZ33_18200 PF08240 Alcohol dehydrogenase GroES-like domain NRZ33_18200 PF00698 Acyl transferase domain NRZ33_18200 PF08659 KR domain NRZ33_18200 PF00550 Phosphopantetheine attachment site NRZ33_18200 PF14765 Polyketide synthase dehydratase NRZ33_18200 PF16197 Ketoacyl-synthetase C-terminal extension NRZ33_18200 PF08990 Erythronolide synthase docking NRZ33_18220 PF00970 Oxidoreductase FAD-binding domain NRZ33_18220 PF00175 Oxidoreductase NAD-binding domain NRZ33_18225 PF03948 Ribosomal protein L9, C-terminal domain NRZ33_18225 PF01281 Ribosomal protein L9, N-terminal domain NRZ33_18230 PF01084 Ribosomal protein S18 NRZ33_18235 PF01250 Ribosomal protein S6 NRZ33_18240 PF01566 Natural resistance-associated macrophage protein NRZ33_18260 PF13673 Acetyltransferase (GNAT) domain NRZ33_18270 PF00588 SpoU rRNA Methylase family NRZ33_18270 PF08032 RNA 2'-O ribose methyltransferase substrate binding NRZ33_18290 PF00773 RNB domain NRZ33_18290 PF08206 Ribonuclease B OB domain NRZ33_18290 PF08461 Ribonuclease R winged-helix domain NRZ33_18290 PF17876 Cold shock domain NRZ33_18290 PF00575 S1 RNA binding domain NRZ33_18295 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_18300 PF02664 S-Ribosylhomocysteinase (LuxS) NRZ33_18310 PF00543 Nitrogen regulatory protein P-II NRZ33_18315 PF02540 NAD synthase NRZ33_18315 PF00795 Carbon-nitrogen hydrolase NRZ33_18350 PF07963 Prokaryotic N-terminal methylation motif NRZ33_18350 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor NRZ33_18355 PF02401 LytB protein NRZ33_18360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRZ33_18365 PF01252 Signal peptidase (SPase) II NRZ33_18370 PF08264 Anticodon-binding domain of tRNA NRZ33_18370 PF00133 tRNA synthetases class I (I, L, M and V) NRZ33_18370 PF06827 Zinc finger found in FPG and IleRS NRZ33_18375 PF06574 FAD synthetase NRZ33_18375 PF01687 Riboflavin kinase NRZ33_18380 PF03023 Lipid II flippase MurJ NRZ33_18385 PF01649 Ribosomal protein S20 NRZ33_18390 PF01022 Bacterial regulatory protein, arsR family NRZ33_18395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_18395 PF03466 LysR substrate binding domain NRZ33_18405 PF06965 Na+/H+ antiporter 1 NRZ33_18410 PF00303 Thymidylate synthase NRZ33_18415 PF01790 Prolipoprotein diacylglyceryl transferase NRZ33_18420 PF01590 GAF domain NRZ33_18420 PF05524 PEP-utilising enzyme, N-terminal NRZ33_18420 PF00391 PEP-utilising enzyme, mobile domain NRZ33_18420 PF02896 PEP-utilising enzyme, TIM barrel domain NRZ33_18425 PF00293 NUDIX domain NRZ33_18430 PF02976 DNA mismatch repair enzyme MutH NRZ33_18440 PF01245 Ribosomal protein L19 NRZ33_18445 PF01746 tRNA (Guanine-1)-methyltransferase NRZ33_18450 PF01782 RimM N-terminal domain NRZ33_18450 PF05239 PRC-barrel domain NRZ33_18455 PF00886 Ribosomal protein S16 NRZ33_18460 PF00448 SRP54-type protein, GTPase domain NRZ33_18460 PF02881 SRP54-type protein, helical bundle domain NRZ33_18460 PF02978 Signal peptide binding domain NRZ33_18465 PF01578 Cytochrome C assembly protein NRZ33_18470 PF00571 CBS domain NRZ33_18470 PF03471 Transporter associated domain NRZ33_18470 PF01595 Cyclin M transmembrane N-terminal domain NRZ33_18475 PF02082 Transcriptional regulator NRZ33_18480 PF00970 Oxidoreductase FAD-binding domain NRZ33_18480 PF00175 Oxidoreductase NAD-binding domain NRZ33_18480 PF00042 Globin NRZ33_18485 PF08238 Sel1 repeat NRZ33_18490 PF00056 lactate/malate dehydrogenase, NAD binding domain NRZ33_18490 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NRZ33_18495 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_18500 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_18505 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ33_18510 PF00005 ABC transporter NRZ33_18515 PF02863 Arginine repressor, C-terminal domain NRZ33_18515 PF01316 Arginine repressor, DNA binding domain NRZ33_18520 PF04261 Dyp-type peroxidase family NRZ33_18525 PF00005 ABC transporter NRZ33_18525 PF08402 TOBE domain NRZ33_18535 PF13416 Bacterial extracellular solute-binding protein NRZ33_18540 PF00543 Nitrogen regulatory protein P-II NRZ33_18545 PF00472 RF-1 domain NRZ33_18550 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NRZ33_18550 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NRZ33_18555 PF07662 Na+ dependent nucleoside transporter C-terminus NRZ33_18555 PF01773 Na+ dependent nucleoside transporter N-terminus NRZ33_18555 PF07670 Nucleoside recognition NRZ33_18560 PF03466 LysR substrate binding domain NRZ33_18560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_18565 PF00255 Glutathione peroxidase NRZ33_18575 PF02595 Glycerate kinase family NRZ33_18580 PF02447 GntP family permease NRZ33_18585 PF13556 PucR C-terminal helix-turn-helix domain NRZ33_18585 PF17853 GGDEF-like domain NRZ33_18585 PF05651 Putative sugar diacid recognition NRZ33_18590 PF06062 Uncharacterised protein family (UPF0231) NRZ33_18605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_18605 PF08447 PAS fold NRZ33_18610 PF03372 Endonuclease/Exonuclease/phosphatase family NRZ33_18625 PF00271 Helicase conserved C-terminal domain NRZ33_18625 PF00270 DEAD/DEAH box helicase NRZ33_18635 PF08534 Redoxin NRZ33_18640 PF00403 Heavy-metal-associated domain NRZ33_18645 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NRZ33_18645 PF17967 Pullulanase N2 domain NRZ33_18645 PF18494 Pullulanase Ins domain NRZ33_18645 PF03714 Bacterial pullanase-associated domain NRZ33_18645 PF11852 Domain of unknown function (DUF3372) NRZ33_18660 PF02583 Metal-sensitive transcriptional repressor NRZ33_18665 PF00155 Aminotransferase class I and II NRZ33_18670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_18670 PF03466 LysR substrate binding domain NRZ33_18680 PF04055 Radical SAM superfamily NRZ33_18685 PF11230 Protein of unknown function (DUF3029) NRZ33_18705 PF14684 Tricorn protease C1 domain NRZ33_18705 PF03572 Peptidase family S41 NRZ33_18705 PF07676 WD40-like Beta Propeller Repeat NRZ33_18705 PF14685 Tricorn protease PDZ domain NRZ33_18750 PF08269 Cache domain NRZ33_18750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_18755 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NRZ33_18755 PF18416 N-acetylglucosamine binding protein domain 2 NRZ33_18760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_18760 PF03466 LysR substrate binding domain NRZ33_18765 PF00005 ABC transporter NRZ33_18765 PF12857 TOBE-like domain NRZ33_18770 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_18775 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_18790 PF13194 Domain of unknown function (DUF4010) NRZ33_18795 PF12464 Maltose acetyltransferase NRZ33_18795 PF14602 Hexapeptide repeat of succinyl-transferase NRZ33_18825 PF00206 Lyase NRZ33_18825 PF14698 Argininosuccinate lyase C-terminal NRZ33_18830 PF00764 Arginosuccinate synthase NRZ33_18835 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NRZ33_18835 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NRZ33_18840 PF00696 Amino acid kinase family NRZ33_18845 PF01118 Semialdehyde dehydrogenase, NAD binding domain NRZ33_18845 PF02774 Semialdehyde dehydrogenase, dimerisation domain NRZ33_18850 PF07687 Peptidase dimerisation domain NRZ33_18850 PF01546 Peptidase family M20/M25/M40 NRZ33_18855 PF00311 Phosphoenolpyruvate carboxylase NRZ33_18860 PF00696 Amino acid kinase family NRZ33_18860 PF00742 Homoserine dehydrogenase NRZ33_18860 PF03447 Homoserine dehydrogenase, NAD binding domain NRZ33_18865 PF01053 Cys/Met metabolism PLP-dependent enzyme NRZ33_18870 PF01340 Met Apo-repressor, MetJ NRZ33_18875 PF06445 GyrI-like small molecule binding domain NRZ33_18875 PF12833 Helix-turn-helix domain NRZ33_18880 PF01588 Putative tRNA binding domain NRZ33_18885 PF03222 Tryptophan/tyrosine permease family NRZ33_18890 PF00459 Inositol monophosphatase family NRZ33_18895 PF00293 NUDIX domain NRZ33_18900 PF13419 Haloacid dehalogenase-like hydrolase NRZ33_18905 PF01479 S4 domain NRZ33_18905 PF00579 tRNA synthetases class I (W and Y) NRZ33_18910 PF00196 Bacterial regulatory proteins, luxR family NRZ33_18915 PF01203 Type II secretion system (T2SS), protein N NRZ33_18920 PF04612 Type II secretion system (T2SS), protein M NRZ33_18925 PF05134 Type II secretion system (T2SS), protein L NRZ33_18925 PF12693 GspL periplasmic domain NRZ33_18930 PF03934 Type II secretion system (T2SS), protein K NRZ33_18945 PF07963 Prokaryotic N-terminal methylation motif NRZ33_18945 PF11612 Type II secretion system (T2SS), protein J NRZ33_18950 PF07963 Prokaryotic N-terminal methylation motif NRZ33_18950 PF02501 Type II secretion system (T2SS), protein I NRZ33_18955 PF12019 Type II transport protein GspH NRZ33_18955 PF07963 Prokaryotic N-terminal methylation motif NRZ33_18960 PF07963 Prokaryotic N-terminal methylation motif NRZ33_18960 PF08334 Type II secretion system (T2SS), protein G NRZ33_18965 PF00482 Type II secretion system (T2SS), protein F NRZ33_18970 PF00437 Type II/IV secretion system protein NRZ33_18975 PF00263 Bacterial type II and III secretion system protein NRZ33_18975 PF03958 Bacterial type II/III secretion system short domain NRZ33_18980 PF11356 Type II secretion system protein C NRZ33_18985 PF01479 S4 domain NRZ33_18990 PF01430 Hsp33 protein NRZ33_18995 PF01293 Phosphoenolpyruvate carboxykinase NRZ33_19000 PF00392 Bacterial regulatory proteins, gntR family NRZ33_19005 PF00557 Metallopeptidase family M24 NRZ33_19005 PF01321 Creatinase/Prolidase N-terminal domain NRZ33_19010 PF11756 Nitrous oxide-stimulated promoter NRZ33_19015 PF00583 Acetyltransferase (GNAT) family NRZ33_19020 PF05433 Glycine zipper 2TM domain NRZ33_19025 PF02872 5'-nucleotidase, C-terminal domain NRZ33_19025 PF00149 Calcineurin-like phosphoesterase NRZ33_19030 PF01810 LysE type translocator NRZ33_19035 PF00196 Bacterial regulatory proteins, luxR family NRZ33_19035 PF03472 Autoinducer binding domain NRZ33_19040 PF00765 Autoinducer synthase NRZ33_19045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_19045 PF03466 LysR substrate binding domain NRZ33_19050 PF17876 Cold shock domain NRZ33_19050 PF08206 Ribonuclease B OB domain NRZ33_19050 PF00773 RNB domain NRZ33_19055 PF00440 Bacterial regulatory proteins, tetR family NRZ33_19065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRZ33_19065 PF02378 Phosphotransferase system, EIIC NRZ33_19065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRZ33_19070 PF01232 Mannitol dehydrogenase Rossmann domain NRZ33_19070 PF08125 Mannitol dehydrogenase C-terminal domain NRZ33_19075 PF05068 Mannitol repressor NRZ33_19080 PF03471 Transporter associated domain NRZ33_19080 PF02080 TrkA-C domain NRZ33_19080 PF00999 Sodium/hydrogen exchanger family NRZ33_19100 PF01544 CorA-like Mg2+ transporter protein NRZ33_19105 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NRZ33_19120 PF04307 LexA-binding, inner membrane-associated putative hydrolase NRZ33_19125 PF07670 Nucleoside recognition NRZ33_19125 PF07662 Na+ dependent nucleoside transporter C-terminus NRZ33_19125 PF01773 Na+ dependent nucleoside transporter N-terminus NRZ33_19130 PF03880 DbpA RNA binding domain NRZ33_19130 PF00270 DEAD/DEAH box helicase NRZ33_19130 PF00271 Helicase conserved C-terminal domain NRZ33_19155 PF01040 UbiA prenyltransferase family NRZ33_19160 PF00425 chorismate binding enzyme NRZ33_19165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NRZ33_19165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRZ33_19165 PF16582 Middle domain of thiamine pyrophosphate NRZ33_19170 PF12697 Alpha/beta hydrolase family NRZ33_19175 PF00378 Enoyl-CoA hydratase/isomerase NRZ33_19180 PF13378 Enolase C-terminal domain-like NRZ33_19185 PF00501 AMP-binding enzyme NRZ33_19195 PF00419 Fimbrial protein NRZ33_19205 PF02753 Pili assembly chaperone PapD, C-terminal domain NRZ33_19205 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NRZ33_19210 PF00577 Outer membrane usher protein NRZ33_19210 PF13953 PapC C-terminal domain NRZ33_19210 PF13954 PapC N-terminal domain NRZ33_19220 PF00419 Fimbrial protein NRZ33_19230 PF08453 Peptidase family M9 N-terminal NRZ33_19230 PF01752 Collagenase NRZ33_19235 PF02698 DUF218 domain NRZ33_19240 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NRZ33_19240 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NRZ33_19250 PF00561 alpha/beta hydrolase fold NRZ33_19255 PF03280 Proteobacterial lipase chaperone protein NRZ33_19270 PF12793 Sugar transport-related sRNA regulator N-term NRZ33_19270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ33_19280 PF01053 Cys/Met metabolism PLP-dependent enzyme NRZ33_19290 PF00465 Iron-containing alcohol dehydrogenase NRZ33_19305 PF03577 Peptidase family C69 NRZ33_19310 PF00106 short chain dehydrogenase NRZ33_19330 PF02308 MgtC family NRZ33_19335 PF02903 Alpha amylase, N-terminal ig-like domain NRZ33_19335 PF16657 Maltogenic Amylase, C-terminal domain NRZ33_19335 PF00128 Alpha amylase, catalytic domain NRZ33_19350 PF00884 Sulfatase NRZ33_19355 PF01037 Lrp/AsnC ligand binding domain NRZ33_19365 PF04204 Homoserine O-succinyltransferase NRZ33_19370 PF01966 HD domain NRZ33_19370 PF00013 KH domain NRZ33_19370 PF12072 Domain of unknown function (DUF3552) NRZ33_19375 PF02464 Competence-damaged protein NRZ33_19375 PF00994 Probable molybdopterin binding domain NRZ33_19390 PF07722 Peptidase C26 NRZ33_19400 PF00027 Cyclic nucleotide-binding domain NRZ33_19400 PF13545 Crp-like helix-turn-helix domain NRZ33_19410 PF13419 Haloacid dehalogenase-like hydrolase NRZ33_19415 PF02899 Phage integrase, N-terminal SAM-like domain NRZ33_19415 PF00589 Phage integrase family NRZ33_19425 PF01678 Diaminopimelate epimerase NRZ33_19430 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NRZ33_19430 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NRZ33_19440 PF01491 Frataxin-like domain NRZ33_19445 PF02230 Phospholipase/Carboxylesterase NRZ33_19450 PF12633 Adenylate cyclase NT domain NRZ33_19450 PF01295 Adenylate cyclase, class-I NRZ33_19455 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NRZ33_19455 PF03900 Porphobilinogen deaminase, C-terminal domain NRZ33_19460 PF02602 Uroporphyrinogen-III synthase HemD NRZ33_19465 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase NRZ33_19475 PF03692 Putative zinc- or iron-chelating domain NRZ33_19480 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NRZ33_19495 PF07715 TonB-dependent Receptor Plug Domain NRZ33_19495 PF00593 TonB dependent receptor NRZ33_19520 PF01638 HxlR-like helix-turn-helix NRZ33_19525 PF08803 Putative mono-oxygenase ydhR NRZ33_19540 PF06055 Exopolysaccharide synthesis, ExoD NRZ33_19550 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_19570 PF13036 Peptidoglycan-synthase activator LpoB NRZ33_19575 PF13302 Acetyltransferase (GNAT) domain NRZ33_19590 PF06968 Biotin and Thiamin Synthesis associated domain NRZ33_19590 PF04055 Radical SAM superfamily NRZ33_19595 PF05690 Thiazole biosynthesis protein ThiG NRZ33_19605 PF00899 ThiF family NRZ33_19610 PF02581 Thiamine monophosphate synthase NRZ33_19615 PF01964 Radical SAM ThiC family NRZ33_19615 PF13667 ThiC-associated domain NRZ33_19620 PF01117 Aerolysin toxin NRZ33_19620 PF03440 Aerolysin/Pertussis toxin (APT) domain NRZ33_19635 PF00486 Transcriptional regulatory protein, C terminal NRZ33_19635 PF00072 Response regulator receiver domain NRZ33_19640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_19645 PF05525 Branched-chain amino acid transport protein NRZ33_19650 PF08443 RimK-like ATP-grasp domain NRZ33_19650 PF18030 RimK PreATP-grasp domain NRZ33_19655 PF02310 B12 binding domain NRZ33_19655 PF02607 B12 binding domain NRZ33_19655 PF02965 Vitamin B12 dependent methionine synthase, activation domain NRZ33_19655 PF00809 Pterin binding enzyme NRZ33_19655 PF02574 Homocysteine S-methyltransferase NRZ33_19660 PF00999 Sodium/hydrogen exchanger family NRZ33_19675 PF08668 HDOD domain NRZ33_19685 PF04228 Putative neutral zinc metallopeptidase NRZ33_19690 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) NRZ33_19705 PF08447 PAS fold NRZ33_19705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_19705 PF13426 PAS domain NRZ33_19710 PF08678 Rsbr N terminal NRZ33_19710 PF01740 STAS domain NRZ33_19715 PF13581 Histidine kinase-like ATPase domain NRZ33_19720 PF00072 Response regulator receiver domain NRZ33_19720 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NRZ33_19720 PF00672 HAMP domain NRZ33_19720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_19720 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_19720 PF01627 Hpt domain NRZ33_19725 PF00072 Response regulator receiver domain NRZ33_19735 PF07690 Major Facilitator Superfamily NRZ33_19740 PF01914 MarC family integral membrane protein NRZ33_19755 PF13580 SIS domain NRZ33_19760 PF02378 Phosphotransferase system, EIIC NRZ33_19760 PF00367 phosphotransferase system, EIIB NRZ33_19775 PF01418 Helix-turn-helix domain, rpiR family NRZ33_19775 PF01380 SIS domain NRZ33_19780 PF01523 Putative modulator of DNA gyrase NRZ33_19785 PF00795 Carbon-nitrogen hydrolase NRZ33_19800 PF13502 AsmA-like C-terminal region NRZ33_19800 PF13116 Protein of unknown function NRZ33_19805 PF10150 Ribonuclease E/G family NRZ33_19805 PF00575 S1 RNA binding domain NRZ33_19810 PF02545 Maf-like protein NRZ33_19815 PF04093 rod shape-determining protein MreD NRZ33_19820 PF04085 rod shape-determining protein MreC NRZ33_19850 PF14245 Type IV pilin PilA NRZ33_19850 PF07963 Prokaryotic N-terminal methylation motif NRZ33_19855 PF07963 Prokaryotic N-terminal methylation motif NRZ33_19855 PF00114 Pilin (bacterial filament) NRZ33_19860 PF07963 Prokaryotic N-terminal methylation motif NRZ33_19870 PF00482 Type II secretion system (T2SS), protein F NRZ33_19875 PF00437 Type II/IV secretion system protein NRZ33_19875 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NRZ33_19890 PF00263 Bacterial type II and III secretion system protein NRZ33_19890 PF03958 Bacterial type II/III secretion system short domain NRZ33_19920 PF17157 Gammaproteobacterial periplasmic sensor domain NRZ33_19920 PF00563 EAL domain NRZ33_19920 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_19925 PF12792 CSS motif domain associated with EAL NRZ33_19925 PF00563 EAL domain NRZ33_19930 PF01699 Sodium/calcium exchanger protein NRZ33_19935 PF00221 Aromatic amino acid lyase NRZ33_19940 PF01175 Urocanase Rossmann-like domain NRZ33_19940 PF17392 Urocanase C-terminal domain NRZ33_19940 PF17391 Urocanase N-terminal domain NRZ33_19945 PF00491 Arginase family NRZ33_19950 PF01979 Amidohydrolase family NRZ33_19955 PF00392 Bacterial regulatory proteins, gntR family NRZ33_19955 PF07702 UTRA domain NRZ33_19960 PF00484 Carbonic anhydrase NRZ33_19965 PF00140 Sigma-70 factor, region 1.2 NRZ33_19965 PF04542 Sigma-70 region 2 NRZ33_19965 PF04545 Sigma-70, region 4 NRZ33_19970 PF18075 FtsX extracellular domain NRZ33_19975 PF00005 ABC transporter NRZ33_19980 PF00448 SRP54-type protein, GTPase domain NRZ33_19980 PF02881 SRP54-type protein, helical bundle domain NRZ33_19995 PF07226 Protein of unknown function (DUF1422) NRZ33_20000 PF00440 Bacterial regulatory proteins, tetR family NRZ33_20010 PF13091 PLD-like domain NRZ33_20020 PF01464 Transglycosylase SLT domain NRZ33_20030 PF02416 mttA/Hcf106 family NRZ33_20035 PF03466 LysR substrate binding domain NRZ33_20035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_20040 PF01914 MarC family integral membrane protein NRZ33_20045 PF10678 Protein of unknown function (DUF2492) NRZ33_20050 PF00375 Sodium:dicarboxylate symporter family NRZ33_20060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_20060 PF03466 LysR substrate binding domain NRZ33_20065 PF13533 Biotin-lipoyl like NRZ33_20070 PF07690 Major Facilitator Superfamily NRZ33_20075 PF07947 YhhN family NRZ33_20100 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NRZ33_20100 PF00326 Prolyl oligopeptidase family NRZ33_20115 PF00106 short chain dehydrogenase NRZ33_20120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_20120 PF03466 LysR substrate binding domain NRZ33_20125 PF02525 Flavodoxin-like fold NRZ33_20130 PF00999 Sodium/hydrogen exchanger family NRZ33_20130 PF02254 TrkA-N domain NRZ33_20170 PF01196 Ribosomal protein L17 NRZ33_20175 PF01000 RNA polymerase Rpb3/RpoA insert domain NRZ33_20175 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NRZ33_20175 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NRZ33_20180 PF00163 Ribosomal protein S4/S9 N-terminal domain NRZ33_20180 PF01479 S4 domain NRZ33_20185 PF00411 Ribosomal protein S11 NRZ33_20190 PF00416 Ribosomal protein S13/S18 NRZ33_20195 PF00444 Ribosomal protein L36 NRZ33_20200 PF00344 SecY translocase NRZ33_20205 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NRZ33_20210 PF00327 Ribosomal protein L30p/L7e NRZ33_20215 PF03719 Ribosomal protein S5, C-terminal domain NRZ33_20215 PF00333 Ribosomal protein S5, N-terminal domain NRZ33_20220 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NRZ33_20225 PF00347 Ribosomal protein L6 NRZ33_20230 PF00410 Ribosomal protein S8 NRZ33_20235 PF00253 Ribosomal protein S14p/S29e NRZ33_20240 PF00673 ribosomal L5P family C-terminus NRZ33_20240 PF00281 Ribosomal protein L5 NRZ33_20245 PF00467 KOW motif NRZ33_20245 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NRZ33_20250 PF00238 Ribosomal protein L14p/L23e NRZ33_20255 PF00366 Ribosomal protein S17 NRZ33_20260 PF00831 Ribosomal L29 protein NRZ33_20265 PF00252 Ribosomal protein L16p/L10e NRZ33_20270 PF07650 KH domain NRZ33_20270 PF00189 Ribosomal protein S3, C-terminal domain NRZ33_20275 PF00237 Ribosomal protein L22p/L17e NRZ33_20280 PF00203 Ribosomal protein S19 NRZ33_20285 PF03947 Ribosomal Proteins L2, C-terminal domain NRZ33_20285 PF00181 Ribosomal Proteins L2, RNA binding domain NRZ33_20290 PF00276 Ribosomal protein L23 NRZ33_20295 PF00573 Ribosomal protein L4/L1 family NRZ33_20300 PF00297 Ribosomal protein L3 NRZ33_20305 PF00338 Ribosomal protein S10p/S20e NRZ33_20315 PF00672 HAMP domain NRZ33_20315 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_20315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_20320 PF00486 Transcriptional regulatory protein, C terminal NRZ33_20320 PF00072 Response regulator receiver domain NRZ33_20325 PF01272 Transcription elongation factor, GreA/GreB, C-term NRZ33_20325 PF03449 Transcription elongation factor, N-terminal NRZ33_20330 PF17674 HHH domain NRZ33_20330 PF00575 S1 RNA binding domain NRZ33_20330 PF09371 Tex-like protein N-terminal domain NRZ33_20330 PF16921 Tex protein YqgF-like domain NRZ33_20350 PF00561 alpha/beta hydrolase fold NRZ33_20355 PF00156 Phosphoribosyl transferase domain NRZ33_20360 PF01106 NifU-like domain NRZ33_20360 PF01521 Iron-sulphur cluster biosynthesis NRZ33_20365 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NRZ33_20365 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NRZ33_20370 PF02556 Preprotein translocase subunit SecB NRZ33_20375 PF00581 Rhodanese-like domain NRZ33_20380 PF01676 Metalloenzyme superfamily NRZ33_20380 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NRZ33_20385 PF01551 Peptidase family M23 NRZ33_20395 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRZ33_20395 PF00356 Bacterial regulatory proteins, lacI family NRZ33_20400 PF01081 KDPG and KHG aldolase NRZ33_20405 PF00920 Dehydratase family NRZ33_20410 PF01202 Shikimate kinase NRZ33_20415 PF02447 GntP family permease NRZ33_20420 PF13091 PLD-like domain NRZ33_20425 PF00270 DEAD/DEAH box helicase NRZ33_20425 PF00271 Helicase conserved C-terminal domain NRZ33_20425 PF17191 RecG wedge domain NRZ33_20435 PF00583 Acetyltransferase (GNAT) family NRZ33_20435 PF09500 Putative thioesterase (yiiD_Cterm) NRZ33_20445 PF02580 D-Tyr-tRNA(Tyr) deacylase NRZ33_20455 PF03631 Virulence factor BrkB NRZ33_20460 PF00679 Elongation factor G C-terminus NRZ33_20460 PF00009 Elongation factor Tu GTP binding domain NRZ33_20460 PF03144 Elongation factor Tu domain 2 NRZ33_20465 PF00120 Glutamine synthetase, catalytic domain NRZ33_20465 PF03951 Glutamine synthetase, beta-Grasp domain NRZ33_20475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_20475 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_20475 PF00989 PAS fold NRZ33_20480 PF00072 Response regulator receiver domain NRZ33_20480 PF02954 Bacterial regulatory protein, Fis family NRZ33_20480 PF00158 Sigma-54 interaction domain NRZ33_20485 PF00962 Adenosine/AMP deaminase NRZ33_20490 PF04055 Radical SAM superfamily NRZ33_20490 PF06969 HemN C-terminal domain NRZ33_20495 PF10675 Protein of unknown function (DUF2489) NRZ33_20500 PF04220 Der GTPase activator (YihI) NRZ33_20505 PF00034 Cytochrome c NRZ33_20510 PF01926 50S ribosome-binding GTPase NRZ33_20515 PF07369 Protein of unknown function (DUF1488) NRZ33_20520 PF01488 Shikimate / quinate 5-dehydrogenase NRZ33_20520 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NRZ33_20520 PF08501 Shikimate dehydrogenase substrate binding domain NRZ33_20525 PF01218 Coproporphyrinogen III oxidase NRZ33_20530 PF01300 Telomere recombination NRZ33_20535 PF00731 AIR carboxylase NRZ33_20540 PF01396 Topoisomerase DNA binding C4 zinc finger NRZ33_20545 PF04361 Protein of unknown function (DUF494) NRZ33_20550 PF17782 DprA winged helix domain NRZ33_20550 PF02481 DNA recombination-mediator protein A NRZ33_20560 PF01327 Polypeptide deformylase NRZ33_20565 PF02911 Formyl transferase, C-terminal domain NRZ33_20565 PF00551 Formyl transferase NRZ33_20570 PF01189 16S rRNA methyltransferase RsmB/F NRZ33_20570 PF01029 NusB family NRZ33_20575 PF02080 TrkA-C domain NRZ33_20575 PF02254 TrkA-N domain NRZ33_20580 PF02386 Cation transport protein NRZ33_20585 PF02646 RmuC family NRZ33_20600 PF02082 Transcriptional regulator NRZ33_20605 PF00294 pfkB family carbohydrate kinase NRZ33_20610 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NRZ33_20610 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NRZ33_20615 PF00117 Glutamine amidotransferase class-I NRZ33_20615 PF00958 GMP synthase C terminal domain NRZ33_20615 PF02540 NAD synthase NRZ33_20620 PF00171 Aldehyde dehydrogenase family NRZ33_20625 PF00202 Aminotransferase class-III NRZ33_20630 PF01381 Helix-turn-helix NRZ33_20630 PF07883 Cupin domain NRZ33_20635 PF00171 Aldehyde dehydrogenase family NRZ33_20645 PF00892 EamA-like transporter family NRZ33_20650 PF12833 Helix-turn-helix domain NRZ33_20655 PF01810 LysE type translocator NRZ33_20660 PF00690 Cation transporter/ATPase, N-terminus NRZ33_20660 PF00689 Cation transporting ATPase, C-terminus NRZ33_20665 PF04143 Sulphur transport NRZ33_20680 PF06206 CpeT/CpcT family (DUF1001) NRZ33_20710 PF14001 YdfZ protein NRZ33_20725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_20725 PF03466 LysR substrate binding domain NRZ33_20740 PF00580 UvrD/REP helicase N-terminal domain NRZ33_20740 PF13361 UvrD-like helicase C-terminal domain NRZ33_20745 PF02608 ABC transporter substrate-binding protein PnrA-like NRZ33_20750 PF00005 ABC transporter NRZ33_20755 PF02653 Branched-chain amino acid transport system / permease component NRZ33_20760 PF02653 Branched-chain amino acid transport system / permease component NRZ33_20765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_20765 PF03466 LysR substrate binding domain NRZ33_20770 PF08240 Alcohol dehydrogenase GroES-like domain NRZ33_20770 PF00107 Zinc-binding dehydrogenase NRZ33_20775 PF00756 Putative esterase NRZ33_20785 PF12867 DinB superfamily NRZ33_20785 PF03781 Sulfatase-modifying factor enzyme 1 NRZ33_20790 PF13593 SBF-like CPA transporter family (DUF4137) NRZ33_20795 PF13520 Amino acid permease NRZ33_20800 PF01588 Putative tRNA binding domain NRZ33_20805 PF13520 Amino acid permease NRZ33_20810 PF04074 YhcH/YjgK/YiaL NRZ33_20815 PF00703 Glycosyl hydrolases family 2 NRZ33_20815 PF02929 Beta galactosidase small chain NRZ33_20815 PF16353 Domain of unknown function(DUF4981) NRZ33_20815 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NRZ33_20815 PF02837 Glycosyl hydrolases family 2, sugar binding domain NRZ33_20820 PF00356 Bacterial regulatory proteins, lacI family NRZ33_20855 PF00132 Bacterial transferase hexapeptide (six repeats) NRZ33_20860 PF01367 5'-3' exonuclease, C-terminal SAM fold NRZ33_20860 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NRZ33_20860 PF00476 DNA polymerase family A NRZ33_20860 PF01612 3'-5' exonuclease NRZ33_20870 PF06005 Cell division protein ZapB NRZ33_20880 PF00132 Bacterial transferase hexapeptide (six repeats) NRZ33_20880 PF06426 Serine acetyltransferase, N-terminal NRZ33_20885 PF01545 Cation efflux family NRZ33_20885 PF16916 Dimerisation domain of Zinc Transporter NRZ33_20890 PF00072 Response regulator receiver domain NRZ33_20890 PF00486 Transcriptional regulatory protein, C terminal NRZ33_20895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_20895 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_20895 PF00672 HAMP domain NRZ33_20895 PF16527 Two-component sensor protein CpxA, periplasmic domain NRZ33_20900 PF00588 SpoU rRNA Methylase family NRZ33_20905 PF01554 MatE NRZ33_20910 PF02630 SCO1/SenC NRZ33_20920 PF00717 Peptidase S24-like NRZ33_20920 PF01726 LexA DNA binding domain NRZ33_20925 PF01553 Acyltransferase NRZ33_20930 PF01040 UbiA prenyltransferase family NRZ33_20935 PF04345 Chorismate lyase NRZ33_20940 PF03748 Flagellar basal body-associated protein FliL NRZ33_20960 PF08240 Alcohol dehydrogenase GroES-like domain NRZ33_20960 PF00107 Zinc-binding dehydrogenase NRZ33_20965 PF00356 Bacterial regulatory proteins, lacI family NRZ33_20965 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRZ33_20970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRZ33_20980 PF03611 PTS system sugar-specific permease component NRZ33_20985 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NRZ33_20990 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NRZ33_20995 PF00535 Glycosyl transferase family 2 NRZ33_21000 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NRZ33_21005 PF01467 Cytidylyltransferase-like NRZ33_21010 PF04393 Protein of unknown function (DUF535) NRZ33_21015 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NRZ33_21015 PF06827 Zinc finger found in FPG and IleRS NRZ33_21015 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NRZ33_21025 PF00471 Ribosomal protein L33 NRZ33_21030 PF00830 Ribosomal L28 family NRZ33_21035 PF04002 RadC-like JAB domain NRZ33_21040 PF02441 Flavoprotein NRZ33_21040 PF04127 DNA / pantothenate metabolism flavoprotein NRZ33_21045 PF00692 dUTPase NRZ33_21050 PF00440 Bacterial regulatory proteins, tetR family NRZ33_21055 PF05552 Conserved TM helix NRZ33_21055 PF00924 Mechanosensitive ion channel NRZ33_21065 PF00342 Phosphoglucose isomerase NRZ33_21070 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NRZ33_21070 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NRZ33_21075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ33_21075 PF03466 LysR substrate binding domain NRZ33_21090 PF13607 Succinyl-CoA ligase like flavodoxin domain NRZ33_21090 PF13380 CoA binding domain NRZ33_21090 PF00583 Acetyltransferase (GNAT) family NRZ33_21115 PF12724 Flavodoxin domain NRZ33_21120 PF02386 Cation transport protein NRZ33_21125 PF01205 Uncharacterized protein family UPF0029 NRZ33_21125 PF09186 Domain of unknown function (DUF1949) NRZ33_21130 PF00557 Metallopeptidase family M24 NRZ33_21135 PF13193 AMP-binding enzyme C-terminal domain NRZ33_21135 PF00501 AMP-binding enzyme NRZ33_21140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NRZ33_21140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NRZ33_21140 PF00378 Enoyl-CoA hydratase/isomerase NRZ33_21145 PF02803 Thiolase, C-terminal domain NRZ33_21145 PF00108 Thiolase, N-terminal domain NRZ33_21150 PF00486 Transcriptional regulatory protein, C terminal NRZ33_21150 PF00072 Response regulator receiver domain NRZ33_21155 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_21155 PF00672 HAMP domain NRZ33_21155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_21160 PF01547 Bacterial extracellular solute-binding protein NRZ33_21170 PF01206 Sulfurtransferase TusA NRZ33_21175 PF01042 Endoribonuclease L-PSP NRZ33_21180 PF13488 Glycine zipper NRZ33_21180 PF00691 OmpA family NRZ33_21185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ33_21185 PF00672 HAMP domain NRZ33_21185 PF02743 Cache domain NRZ33_21190 PF03352 Methyladenine glycosylase NRZ33_21195 PF02091 Glycyl-tRNA synthetase alpha subunit NRZ33_21200 PF02092 Glycyl-tRNA synthetase beta subunit NRZ33_21200 PF05746 DALR anticodon binding domain NRZ33_21215 PF01202 Shikimate kinase NRZ33_21235 PF03222 Tryptophan/tyrosine permease family NRZ33_21240 PF12801 4Fe-4S binding domain NRZ33_21245 PF07702 UTRA domain NRZ33_21245 PF00392 Bacterial regulatory proteins, gntR family NRZ33_21250 PF02378 Phosphotransferase system, EIIC NRZ33_21250 PF00367 phosphotransferase system, EIIB NRZ33_21255 PF02056 Family 4 glycosyl hydrolase NRZ33_21255 PF11975 Family 4 glycosyl hydrolase C-terminal domain NRZ33_21260 PF00356 Bacterial regulatory proteins, lacI family NRZ33_21265 PF13458 Periplasmic binding protein NRZ33_21270 PF02653 Branched-chain amino acid transport system / permease component NRZ33_21275 PF02653 Branched-chain amino acid transport system / permease component NRZ33_21275 PF11862 Domain of unknown function (DUF3382) NRZ33_21280 PF12399 Branched-chain amino acid ATP-binding cassette transporter NRZ33_21280 PF00005 ABC transporter NRZ33_21285 PF00005 ABC transporter NRZ33_21300 PF00581 Rhodanese-like domain NRZ33_21305 PF01694 Rhomboid family NRZ33_21305 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease NRZ33_21310 PF12262 Bacterial virulence factor lipase N-terminal NRZ33_21315 PF04380 Membrane fusogenic activity NRZ33_21320 PF00175 Oxidoreductase NAD-binding domain NRZ33_21325 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NRZ33_21335 PF07497 Rho termination factor, RNA-binding domain NRZ33_21335 PF07498 Rho termination factor, N-terminal domain NRZ33_21335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRZ33_21340 PF00085 Thioredoxin NRZ33_21345 PF00270 DEAD/DEAH box helicase NRZ33_21345 PF00271 Helicase conserved C-terminal domain NRZ33_21350 PF02541 Ppx/GppA phosphatase family NRZ33_21360 PF04445 Putative SAM-dependent methyltransferase NRZ33_21365 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ33_21370 PF03707 Bacterial signalling protein N terminal repeat NRZ33_21370 PF00990 Diguanylate cyclase, GGDEF domain NRZ33_21370 PF00563 EAL domain NRZ33_21375 PF01432 Peptidase family M3 NRZ33_21385 PF18416 N-acetylglucosamine binding protein domain 2 NRZ33_21385 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NRZ33_21390 PF00490 Delta-aminolevulinic acid dehydratase NRZ33_21395 PF01026 TatD related DNase NRZ33_21400 PF00902 Sec-independent protein translocase protein (TatC) NRZ33_21405 PF02416 mttA/Hcf106 family NRZ33_21410 PF02416 mttA/Hcf106 family NRZ33_21415 PF03109 ABC1 family NRZ33_21420 PF02036 SCP-2 sterol transfer family NRZ33_21425 PF01209 ubiE/COQ5 methyltransferase family NRZ33_21430 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NRZ33_21435 PF07969 Amidohydrolase family NRZ33_21480 PF03544 Gram-negative bacterial TonB protein C-terminal NRZ33_21485 PF02472 Biopolymer transport protein ExbD/TolR NRZ33_21490 PF01618 MotA/TolQ/ExbB proton channel family NRZ33_21495 PF01618 MotA/TolQ/ExbB proton channel family NRZ33_21505 PF03472 Autoinducer binding domain NRZ33_21505 PF00196 Bacterial regulatory proteins, luxR family NRZ33_21510 PF01380 SIS domain NRZ33_21515 PF00455 DeoR C terminal sensor domain NRZ33_21515 PF08220 DeoR-like helix-turn-helix domain NRZ33_21520 PF00072 Response regulator receiver domain NRZ33_21520 PF00486 Transcriptional regulatory protein, C terminal NRZ33_21525 PF00672 HAMP domain NRZ33_21525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ33_21525 PF00512 His Kinase A (phospho-acceptor) domain NRZ33_21530 PF00905 Penicillin binding protein transpeptidase domain NRZ33_21535 PF06123 Inner membrane protein CreD NRZ33_21540 PF00132 Bacterial transferase hexapeptide (six repeats) NRZ33_21540 PF14602 Hexapeptide repeat of succinyl-transferase NRZ33_21540 PF12804 MobA-like NTP transferase domain NRZ33_21545 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NRZ33_21545 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NRZ33_21550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRZ33_21550 PF02874 ATP synthase alpha/beta family, beta-barrel domain NRZ33_21555 PF00231 ATP synthase NRZ33_21560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRZ33_21560 PF00306 ATP synthase alpha/beta chain, C terminal domain NRZ33_21560 PF02874 ATP synthase alpha/beta family, beta-barrel domain NRZ33_21565 PF00213 ATP synthase delta (OSCP) subunit NRZ33_21570 PF00430 ATP synthase B/B' CF(0) NRZ33_21575 PF00137 ATP synthase subunit C NRZ33_21580 PF00119 ATP synthase A chain NRZ33_21590 PF17762 HTH domain found in ParB protein NRZ33_21590 PF02195 ParB-like nuclease domain NRZ33_21595 PF13614 AAA domain NRZ33_21600 PF02527 rRNA small subunit methyltransferase G NRZ33_21605 PF01134 Glucose inhibited division protein A NRZ33_21605 PF13932 GidA associated domain NRZ33_21610 PF00258 Flavodoxin NRZ33_21615 PF07715 TonB-dependent Receptor Plug Domain NRZ33_21615 PF00593 TonB dependent receptor NRZ33_21620 PF00005 ABC transporter NRZ33_21625 PF00005 ABC transporter NRZ33_21635 PF01032 FecCD transport family NRZ33_21640 PF01926 50S ribosome-binding GTPase NRZ33_21640 PF12631 MnmE helical domain NRZ33_21640 PF10396 GTP-binding protein TrmE N-terminus NRZ33_21645 PF02096 60Kd inner membrane protein NRZ33_21645 PF14849 YidC periplasmic domain NRZ33_21650 PF01809 Putative membrane protein insertion efficiency factor NRZ33_21655 PF00825 Ribonuclease P NRZ33_21660 PF00468 Ribosomal protein L34 NRZ33_21665 PF00005 ABC transporter NRZ33_21670 PF00528 Binding-protein-dependent transport system inner membrane component NRZ33_21675 PF00497 Bacterial extracellular solute-binding proteins, family 3