locus-tag class description NRZ29_00005 PF00308 Bacterial dnaA protein NRZ29_00005 PF08299 Bacterial dnaA protein helix-turn-helix NRZ29_00005 PF11638 DnaA N-terminal domain NRZ29_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NRZ29_00010 PF02767 DNA polymerase III beta subunit, central domain NRZ29_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NRZ29_00015 PF02463 RecF/RecN/SMC N terminal domain NRZ29_00020 PF00204 DNA gyrase B NRZ29_00020 PF00986 DNA gyrase B subunit, carboxyl terminus NRZ29_00020 PF18053 DNA gyrase B subunit insert domain NRZ29_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_00020 PF01751 Toprim domain NRZ29_00030 PF13280 WYL domain NRZ29_00030 PF08279 HTH domain NRZ29_00035 PF01965 DJ-1/PfpI family NRZ29_00035 PF12833 Helix-turn-helix domain NRZ29_00040 PF12706 Beta-lactamase superfamily domain NRZ29_00045 PF00011 Hsp20/alpha crystallin family NRZ29_00050 PF00011 Hsp20/alpha crystallin family NRZ29_00055 PF00155 Aminotransferase class I and II NRZ29_00070 PF07690 Major Facilitator Superfamily NRZ29_00075 PF00072 Response regulator receiver domain NRZ29_00075 PF00486 Transcriptional regulatory protein, C terminal NRZ29_00080 PF13492 GAF domain NRZ29_00080 PF13493 Domain of unknown function (DUF4118) NRZ29_00080 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_00080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_00080 PF02702 Osmosensitive K+ channel His kinase sensor domain NRZ29_00085 PF02669 K+-transporting ATPase, c chain NRZ29_00095 PF03814 Potassium-transporting ATPase A subunit NRZ29_00100 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ29_00100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRZ29_00105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_00105 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_00105 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ29_00110 PF00873 AcrB/AcrD/AcrF family NRZ29_00115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ29_00120 PF00440 Bacterial regulatory proteins, tetR family NRZ29_00150 PF00224 Pyruvate kinase, barrel domain NRZ29_00150 PF02887 Pyruvate kinase, alpha/beta domain NRZ29_00155 PF07690 Major Facilitator Superfamily NRZ29_00165 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_00165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_00165 PF00672 HAMP domain NRZ29_00170 PF02954 Bacterial regulatory protein, Fis family NRZ29_00170 PF14532 Sigma-54 interaction domain NRZ29_00170 PF00072 Response regulator receiver domain NRZ29_00185 PF12146 Serine aminopeptidase, S33 NRZ29_00190 PF00132 Bacterial transferase hexapeptide (six repeats) NRZ29_00195 PF12105 SpoU, rRNA methylase, C-terminal NRZ29_00195 PF00588 SpoU rRNA Methylase family NRZ29_00200 PF04607 Region found in RelA / SpoT proteins NRZ29_00200 PF13291 ACT domain NRZ29_00200 PF02824 TGS domain NRZ29_00205 PF01192 RNA polymerase Rpb6 NRZ29_00210 PF00625 Guanylate kinase NRZ29_00215 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NRZ29_00230 PF00892 EamA-like transporter family NRZ29_00250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_00250 PF03466 LysR substrate binding domain NRZ29_00255 PF00579 tRNA synthetases class I (W and Y) NRZ29_00260 PF00582 Universal stress protein family NRZ29_00265 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NRZ29_00265 PF12241 Trans-2-enoyl-CoA reductase catalytic region NRZ29_00265 PF07055 Enoyl reductase FAD binding domain NRZ29_00270 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_00275 PF00210 Ferritin-like domain NRZ29_00285 PF07690 Major Facilitator Superfamily NRZ29_00290 PF01810 LysE type translocator NRZ29_00310 PF16967 E-set like domain NRZ29_00310 PF15976 CS1-pili formation C-terminal NRZ29_00315 PF18649 EcpB C-terminal domain NRZ29_00320 PF16449 Fimbrillin MatB NRZ29_00325 PF00196 Bacterial regulatory proteins, luxR family NRZ29_00325 PF00072 Response regulator receiver domain NRZ29_00330 PF01627 Hpt domain NRZ29_00330 PF00989 PAS fold NRZ29_00330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_00330 PF00072 Response regulator receiver domain NRZ29_00330 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ29_00330 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_00340 PF06580 Histidine kinase NRZ29_00340 PF07694 5TMR of 5TMR-LYT NRZ29_00340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_00345 PF00072 Response regulator receiver domain NRZ29_00345 PF04397 LytTr DNA-binding domain NRZ29_00350 PF07690 Major Facilitator Superfamily NRZ29_00355 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NRZ29_00355 PF02222 ATP-grasp domain NRZ29_00360 PF00731 AIR carboxylase NRZ29_00375 PF03466 LysR substrate binding domain NRZ29_00375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_00380 PF00593 TonB dependent receptor NRZ29_00380 PF07715 TonB-dependent Receptor Plug Domain NRZ29_00385 PF01177 Asp/Glu/Hydantoin racemase NRZ29_00420 PF00899 ThiF family NRZ29_00425 PF02657 Fe-S metabolism associated domain NRZ29_00430 PF00266 Aminotransferase class-V NRZ29_00435 PF00580 UvrD/REP helicase N-terminal domain NRZ29_00435 PF13361 UvrD-like helicase C-terminal domain NRZ29_00440 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_00440 PF00563 EAL domain NRZ29_00440 PF03707 Bacterial signalling protein N terminal repeat NRZ29_00445 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NRZ29_00450 PF08240 Alcohol dehydrogenase GroES-like domain NRZ29_00450 PF00107 Zinc-binding dehydrogenase NRZ29_00455 PF00155 Aminotransferase class I and II NRZ29_00460 PF08360 QacR-like protein, C-terminal region NRZ29_00460 PF00440 Bacterial regulatory proteins, tetR family NRZ29_00465 PF01370 NAD dependent epimerase/dehydratase family NRZ29_00480 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) NRZ29_00500 PF07715 TonB-dependent Receptor Plug Domain NRZ29_00500 PF00593 TonB dependent receptor NRZ29_00505 PF01497 Periplasmic binding protein NRZ29_00510 PF00005 ABC transporter NRZ29_00515 PF01032 FecCD transport family NRZ29_00520 PF01032 FecCD transport family NRZ29_00525 PF00005 ABC transporter NRZ29_00530 PF08021 Siderophore-interacting FAD-binding domain NRZ29_00530 PF00005 ABC transporter NRZ29_00530 PF00664 ABC transporter transmembrane region NRZ29_00530 PF04954 Siderophore-interacting protein NRZ29_00540 PF00501 AMP-binding enzyme NRZ29_00540 PF13193 AMP-binding enzyme C-terminal domain NRZ29_00540 PF00668 Condensation domain NRZ29_00540 PF00550 Phosphopantetheine attachment site NRZ29_00545 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NRZ29_00550 PF00501 AMP-binding enzyme NRZ29_00550 PF00668 Condensation domain NRZ29_00550 PF00550 Phosphopantetheine attachment site NRZ29_00560 PF00282 Pyridoxal-dependent decarboxylase conserved domain NRZ29_00565 PF03755 YicC-like family, N-terminal region NRZ29_00565 PF08340 Domain of unknown function (DUF1732) NRZ29_00570 PF03725 3' exoribonuclease family, domain 2 NRZ29_00570 PF01138 3' exoribonuclease family, domain 1 NRZ29_00575 PF00156 Phosphoribosyl transferase domain NRZ29_00580 PF00403 Heavy-metal-associated domain NRZ29_00585 PF13411 MerR HTH family regulatory protein NRZ29_00590 PF00563 EAL domain NRZ29_00590 PF01590 GAF domain NRZ29_00590 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_00590 PF00360 Phytochrome region NRZ29_00595 PF06288 Protein of unknown function (DUF1040) NRZ29_00600 PF13746 4Fe-4S dicluster domain NRZ29_00600 PF12801 4Fe-4S binding domain NRZ29_00600 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase NRZ29_00605 PF01636 Phosphotransferase enzyme family NRZ29_00610 PF01323 DSBA-like thioredoxin domain NRZ29_00615 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NRZ29_00615 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NRZ29_00620 PF00857 Isochorismatase family NRZ29_00630 PF04463 Protein of unknown function (DUF523) NRZ29_00635 PF01553 Acyltransferase NRZ29_00640 PF01553 Acyltransferase NRZ29_00645 PF13335 Magnesium chelatase, subunit ChlI C-terminal NRZ29_00645 PF01078 Magnesium chelatase, subunit ChlI NRZ29_00650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NRZ29_00650 PF00205 Thiamine pyrophosphate enzyme, central domain NRZ29_00650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRZ29_00660 PF01063 Amino-transferase class IV NRZ29_00665 PF00920 Dehydratase family NRZ29_00670 PF00291 Pyridoxal-phosphate dependent enzyme NRZ29_00670 PF00585 C-terminal regulatory domain of Threonine dehydratase NRZ29_00675 PF00691 OmpA family NRZ29_00675 PF01389 OmpA-like transmembrane domain NRZ29_00685 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NRZ29_00685 PF00270 DEAD/DEAH box helicase NRZ29_00685 PF00271 Helicase conserved C-terminal domain NRZ29_00685 PF17764 3′ DNA-binding domain (3′BD) NRZ29_00685 PF18074 Primosomal protein N C-terminal domain NRZ29_00690 PF01197 Ribosomal protein L31 NRZ29_00695 PF11066 Protein of unknown function (DUF2867) NRZ29_00695 PF13460 NAD(P)H-binding NRZ29_00700 PF00390 Malic enzyme, N-terminal domain NRZ29_00700 PF03949 Malic enzyme, NAD binding domain NRZ29_00710 PF00672 HAMP domain NRZ29_00710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_00710 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_00715 PF00072 Response regulator receiver domain NRZ29_00715 PF00486 Transcriptional regulatory protein, C terminal NRZ29_00720 PF05958 tRNA (Uracil-5-)-methyltransferase NRZ29_00755 PF16254 Domain of unknown function (DUF4910) NRZ29_00755 PF16221 winged helix-turn-helix NRZ29_00755 PF09940 Domain of unknown function (DUF2172) NRZ29_00775 PF03102 NeuB family NRZ29_00775 PF08666 SAF domain NRZ29_00785 PF02348 Cytidylyltransferase NRZ29_00805 PF13193 AMP-binding enzyme C-terminal domain NRZ29_00805 PF00501 AMP-binding enzyme NRZ29_00820 PF00535 Glycosyl transferase family 2 NRZ29_00825 PF03275 UDP-galactopyranose mutase NRZ29_00845 PF13649 Methyltransferase domain NRZ29_00850 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NRZ29_00855 PF02719 Polysaccharide biosynthesis protein NRZ29_00860 PF00128 Alpha amylase, catalytic domain NRZ29_00860 PF02903 Alpha amylase, N-terminal ig-like domain NRZ29_00875 PF00012 Hsp70 protein NRZ29_00880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRZ29_00880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRZ29_00885 PF05981 CreA protein NRZ29_00900 PF01258 Prokaryotic dksA/traR C4-type zinc finger NRZ29_00905 PF00120 Glutamine synthetase, catalytic domain NRZ29_00910 PF00202 Aminotransferase class-III NRZ29_00915 PF13416 Bacterial extracellular solute-binding protein NRZ29_00920 PF13416 Bacterial extracellular solute-binding protein NRZ29_00925 PF08402 TOBE domain NRZ29_00925 PF00005 ABC transporter NRZ29_00930 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_00935 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_00940 PF03475 3-alpha domain NRZ29_00940 PF03473 MOSC domain NRZ29_00955 PF03061 Thioesterase superfamily NRZ29_00960 PF00270 DEAD/DEAH box helicase NRZ29_00960 PF00271 Helicase conserved C-terminal domain NRZ29_00960 PF16124 RecQ zinc-binding NRZ29_00960 PF09382 RQC domain NRZ29_00960 PF00570 HRDC domain NRZ29_00965 PF00034 Cytochrome c NRZ29_00970 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NRZ29_00980 PF02592 Putative vitamin uptake transporter NRZ29_00985 PF03737 Aldolase/RraA NRZ29_00990 PF00672 HAMP domain NRZ29_00990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_00995 PF01769 Divalent cation transporter NRZ29_00995 PF03448 MgtE intracellular N domain NRZ29_00995 PF00571 CBS domain NRZ29_01000 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NRZ29_01000 PF14824 Sirohaem biosynthesis protein central NRZ29_01000 PF10414 Sirohaem synthase dimerisation region NRZ29_01005 PF01226 Formate/nitrite transporter NRZ29_01010 PF13806 Rieske-like [2Fe-2S] domain NRZ29_01020 PF18267 Rubredoxin NAD+ reductase C-terminal domain NRZ29_01020 PF04324 BFD-like [2Fe-2S] binding domain NRZ29_01020 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NRZ29_01020 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NRZ29_01020 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ29_01035 PF00005 ABC transporter NRZ29_01040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ29_01050 PF10431 C-terminal, D2-small domain, of ClpB protein NRZ29_01050 PF07724 AAA domain (Cdc48 subfamily) NRZ29_01050 PF00004 ATPase family associated with various cellular activities (AAA) NRZ29_01055 PF00227 Proteasome subunit NRZ29_01065 PF03485 Arginyl tRNA synthetase N terminal domain NRZ29_01065 PF05746 DALR anticodon binding domain NRZ29_01065 PF00750 tRNA synthetases class I (R) NRZ29_01075 PF04542 Sigma-70 region 2 NRZ29_01075 PF04545 Sigma-70, region 4 NRZ29_01080 PF12973 ChrR Cupin-like domain NRZ29_01085 PF02673 Bacitracin resistance protein BacA NRZ29_01090 PF00248 Aldo/keto reductase family NRZ29_01095 PF01263 Aldose 1-epimerase NRZ29_01100 PF00288 GHMP kinases N terminal domain NRZ29_01100 PF10509 Galactokinase galactose-binding signature NRZ29_01100 PF08544 GHMP kinases C terminal NRZ29_01105 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NRZ29_01105 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NRZ29_01110 PF16363 GDP-mannose 4,6 dehydratase NRZ29_01115 PF00356 Bacterial regulatory proteins, lacI family NRZ29_01120 PF16353 Domain of unknown function(DUF4981) NRZ29_01120 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NRZ29_01120 PF02837 Glycosyl hydrolases family 2, sugar binding domain NRZ29_01120 PF02929 Beta galactosidase small chain NRZ29_01120 PF00703 Glycosyl hydrolases family 2 NRZ29_01125 PF13407 Periplasmic binding protein domain NRZ29_01130 PF00005 ABC transporter NRZ29_01135 PF02653 Branched-chain amino acid transport system / permease component NRZ29_01140 PF00672 HAMP domain NRZ29_01140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_01140 PF02743 Cache domain NRZ29_01165 PF00696 Amino acid kinase family NRZ29_01170 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NRZ29_01170 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NRZ29_01175 PF03606 C4-dicarboxylate anaerobic carrier NRZ29_01180 PF01316 Arginine repressor, DNA binding domain NRZ29_01180 PF02863 Arginine repressor, C-terminal domain NRZ29_01185 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain NRZ29_01185 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain NRZ29_01190 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NRZ29_01190 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NRZ29_01210 PF02666 Phosphatidylserine decarboxylase NRZ29_01215 PF00672 HAMP domain NRZ29_01215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_01215 PF02743 Cache domain NRZ29_01220 PF08212 Lipocalin-like domain NRZ29_01225 PF12833 Helix-turn-helix domain NRZ29_01225 PF06719 AraC-type transcriptional regulator N-terminus NRZ29_01230 PF00465 Iron-containing alcohol dehydrogenase NRZ29_01235 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NRZ29_01235 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NRZ29_01235 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NRZ29_01240 PF02233 NAD(P) transhydrogenase beta subunit NRZ29_01250 PF03313 Serine dehydratase alpha chain NRZ29_01255 PF00375 Sodium:dicarboxylate symporter family NRZ29_01260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRZ29_01260 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ29_01265 PF13525 Outer membrane lipoprotein NRZ29_01270 PF01479 S4 domain NRZ29_01270 PF00849 RNA pseudouridylate synthase NRZ29_01275 PF02578 Multi-copper polyphenol oxidoreductase laccase NRZ29_01280 PF07724 AAA domain (Cdc48 subfamily) NRZ29_01280 PF17871 AAA lid domain NRZ29_01280 PF02861 Clp amino terminal domain, pathogenicity island component NRZ29_01280 PF10431 C-terminal, D2-small domain, of ClpB protein NRZ29_01280 PF00004 ATPase family associated with various cellular activities (AAA) NRZ29_01290 PF03590 Aspartate-ammonia ligase NRZ29_01295 PF01037 Lrp/AsnC ligand binding domain NRZ29_01305 PF10063 Uncharacterized integral membrane protein (DUF2301) NRZ29_01310 PF00571 CBS domain NRZ29_01310 PF00478 IMP dehydrogenase / GMP reductase domain NRZ29_01330 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_01330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_01340 PF00158 Sigma-54 interaction domain NRZ29_01340 PF00072 Response regulator receiver domain NRZ29_01345 PF06496 Protein of unknown function (DUF1097) NRZ29_01350 PF00174 Oxidoreductase molybdopterin binding domain NRZ29_01355 PF01794 Ferric reductase like transmembrane component NRZ29_01370 PF00486 Transcriptional regulatory protein, C terminal NRZ29_01370 PF00072 Response regulator receiver domain NRZ29_01375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_01385 PF01568 Molydopterin dinucleotide binding domain NRZ29_01385 PF18364 Molybdopterin oxidoreductase N-terminal domain NRZ29_01385 PF00384 Molybdopterin oxidoreductase NRZ29_01390 PF03264 NapC/NirT cytochrome c family, N-terminal region NRZ29_01395 PF01751 Toprim domain NRZ29_01395 PF01131 DNA topoisomerase NRZ29_01410 PF12833 Helix-turn-helix domain NRZ29_01410 PF12852 Cupin NRZ29_01415 PF02386 Cation transport protein NRZ29_01420 PF02080 TrkA-C domain NRZ29_01420 PF02254 TrkA-N domain NRZ29_01425 PF01565 FAD binding domain NRZ29_01425 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NRZ29_01430 PF02237 Biotin protein ligase C terminal domain NRZ29_01430 PF03099 Biotin/lipoate A/B protein ligase family NRZ29_01430 PF08279 HTH domain NRZ29_01435 PF00485 Phosphoribulokinase / Uridine kinase family NRZ29_01450 PF03144 Elongation factor Tu domain 2 NRZ29_01450 PF03143 Elongation factor Tu C-terminal domain NRZ29_01450 PF00009 Elongation factor Tu GTP binding domain NRZ29_01460 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NRZ29_01465 PF00467 KOW motif NRZ29_01465 PF02357 Transcription termination factor nusG NRZ29_01470 PF00298 Ribosomal protein L11, RNA binding domain NRZ29_01470 PF03946 Ribosomal protein L11, N-terminal domain NRZ29_01475 PF00687 Ribosomal protein L1p/L10e family NRZ29_01480 PF00466 Ribosomal protein L10 NRZ29_01485 PF16320 Ribosomal protein L7/L12 dimerisation domain NRZ29_01485 PF00542 Ribosomal protein L7/L12 C-terminal domain NRZ29_01490 PF10385 RNA polymerase beta subunit external 1 domain NRZ29_01490 PF04565 RNA polymerase Rpb2, domain 3 NRZ29_01490 PF04561 RNA polymerase Rpb2, domain 2 NRZ29_01490 PF04560 RNA polymerase Rpb2, domain 7 NRZ29_01490 PF04563 RNA polymerase beta subunit NRZ29_01490 PF00562 RNA polymerase Rpb2, domain 6 NRZ29_01495 PF00623 RNA polymerase Rpb1, domain 2 NRZ29_01495 PF04983 RNA polymerase Rpb1, domain 3 NRZ29_01495 PF05000 RNA polymerase Rpb1, domain 4 NRZ29_01495 PF04998 RNA polymerase Rpb1, domain 5 NRZ29_01495 PF04997 RNA polymerase Rpb1, domain 1 NRZ29_01500 PF13309 HTH domain NRZ29_01500 PF08348 YheO-like PAS domain NRZ29_01505 PF01042 Endoribonuclease L-PSP NRZ29_01510 PF02635 DsrE/DsrF-like family NRZ29_01515 PF02635 DsrE/DsrF-like family NRZ29_01520 PF04077 DsrH like protein NRZ29_01525 PF00164 Ribosomal protein S12/S23 NRZ29_01530 PF00177 Ribosomal protein S7p/S5e NRZ29_01535 PF03144 Elongation factor Tu domain 2 NRZ29_01535 PF00009 Elongation factor Tu GTP binding domain NRZ29_01535 PF03764 Elongation factor G, domain IV NRZ29_01535 PF14492 Elongation Factor G, domain II NRZ29_01535 PF00679 Elongation factor G C-terminus NRZ29_01540 PF03143 Elongation factor Tu C-terminal domain NRZ29_01540 PF03144 Elongation factor Tu domain 2 NRZ29_01540 PF00009 Elongation factor Tu GTP binding domain NRZ29_01580 PF00860 Permease family NRZ29_01585 PF02733 Dak1 domain NRZ29_01590 PF02734 DAK2 domain NRZ29_01595 PF03610 PTS system fructose IIA component NRZ29_01595 PF05524 PEP-utilising enzyme, N-terminal NRZ29_01595 PF00391 PEP-utilising enzyme, mobile domain NRZ29_01595 PF00381 PTS HPr component phosphorylation site NRZ29_01600 PF00465 Iron-containing alcohol dehydrogenase NRZ29_01605 PF00989 PAS fold NRZ29_01605 PF00158 Sigma-54 interaction domain NRZ29_01605 PF02954 Bacterial regulatory protein, Fis family NRZ29_01610 PF04371 Porphyromonas-type peptidyl-arginine deiminase NRZ29_01620 PF01594 AI-2E family transporter NRZ29_01625 PF00293 NUDIX domain NRZ29_01650 PF00199 Catalase NRZ29_01650 PF06628 Catalase-related immune-responsive NRZ29_01655 PF00583 Acetyltransferase (GNAT) family NRZ29_01675 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_01685 PF00005 ABC transporter NRZ29_01685 PF12857 TOBE-like domain NRZ29_01695 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_01710 PF00392 Bacterial regulatory proteins, gntR family NRZ29_01710 PF07702 UTRA domain NRZ29_01720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_01720 PF03466 LysR substrate binding domain NRZ29_01730 PF17954 Quercetinase C-terminal cupin domain NRZ29_01730 PF02678 Pirin NRZ29_01735 PF07681 DoxX NRZ29_01740 PF17946 RecC C-terminal domain NRZ29_01745 PF12705 PD-(D/E)XK nuclease superfamily NRZ29_01745 PF00580 UvrD/REP helicase N-terminal domain NRZ29_01745 PF13361 UvrD-like helicase C-terminal domain NRZ29_01750 PF13538 UvrD-like helicase C-terminal domain NRZ29_01765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRZ29_01775 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_01800 PF00072 Response regulator receiver domain NRZ29_01800 PF00486 Transcriptional regulatory protein, C terminal NRZ29_01805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_01805 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_01805 PF00672 HAMP domain NRZ29_01810 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_01810 PF08448 PAS fold NRZ29_01815 PF00593 TonB dependent receptor NRZ29_01815 PF07715 TonB-dependent Receptor Plug Domain NRZ29_01820 PF00313 'Cold-shock' DNA-binding domain NRZ29_01830 PF01545 Cation efflux family NRZ29_01830 PF16916 Dimerisation domain of Zinc Transporter NRZ29_01845 PF00436 Single-strand binding protein family NRZ29_01850 PF00196 Bacterial regulatory proteins, luxR family NRZ29_01855 PF17755 UvrA DNA-binding domain NRZ29_01855 PF17760 UvrA interaction domain NRZ29_01855 PF00005 ABC transporter NRZ29_01860 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_01865 PF03922 OmpW family NRZ29_01870 PF12729 Four helix bundle sensory module for signal transduction NRZ29_01870 PF00672 HAMP domain NRZ29_01870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_01885 PF02219 Methylenetetrahydrofolate reductase NRZ29_01895 PF03594 Benzoate membrane transport protein NRZ29_01900 PF01381 Helix-turn-helix NRZ29_01900 PF07883 Cupin domain NRZ29_01935 PF04363 Protein of unknown function (DUF496) NRZ29_01945 PF04751 Protein of unknown function (DUF615) NRZ29_01950 PF01523 Putative modulator of DNA gyrase NRZ29_01955 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NRZ29_01960 PF01722 BolA-like protein NRZ29_01970 PF05494 MlaC protein NRZ29_01975 PF02470 MlaD protein NRZ29_01980 PF02405 Permease MlaE NRZ29_01985 PF00005 ABC transporter NRZ29_01990 PF00571 CBS domain NRZ29_01990 PF01380 SIS domain NRZ29_02000 PF06835 Lipopolysaccharide-assembly, LptC-related NRZ29_02005 PF03968 OstA-like protein NRZ29_02010 PF00005 ABC transporter NRZ29_02010 PF12399 Branched-chain amino acid ATP-binding cassette transporter NRZ29_02015 PF00309 Sigma-54 factor, Activator interacting domain (AID) NRZ29_02015 PF04552 Sigma-54, DNA binding domain NRZ29_02015 PF04963 Sigma-54 factor, core binding domain NRZ29_02020 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NRZ29_02025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRZ29_02030 PF03668 P-loop ATPase protein family NRZ29_02035 PF00381 PTS HPr component phosphorylation site NRZ29_02040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRZ29_02040 PF00874 PRD domain NRZ29_02040 PF08279 HTH domain NRZ29_02040 PF05043 Mga helix-turn-helix domain NRZ29_02045 PF07071 KDGP aldolase NRZ29_02050 PF03841 L-seryl-tRNA selenium transferase NRZ29_02055 PF01979 Amidohydrolase family NRZ29_02085 PF13180 PDZ domain NRZ29_02090 PF13180 PDZ domain NRZ29_02090 PF00595 PDZ domain NRZ29_02100 PF03969 AFG1-like ATPase NRZ29_02105 PF00572 Ribosomal protein L13 NRZ29_02110 PF00380 Ribosomal protein S9/S16 NRZ29_02115 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NRZ29_02115 PF00355 Rieske [2Fe-2S] domain NRZ29_02120 PF00033 Cytochrome b/b6/petB NRZ29_02120 PF00032 Cytochrome b(C-terminal)/b6/petD NRZ29_02125 PF02167 Cytochrome C1 family NRZ29_02130 PF00043 Glutathione S-transferase, C-terminal domain NRZ29_02130 PF02798 Glutathione S-transferase, N-terminal domain NRZ29_02135 PF04386 Stringent starvation protein B NRZ29_02140 PF04972 BON domain NRZ29_02145 PF13580 SIS domain NRZ29_02150 PF02021 Uncharacterised protein family UPF0102 NRZ29_02155 PF04348 LppC putative lipoprotein NRZ29_02160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NRZ29_02170 PF02381 MraZ protein, putative antitoxin-like NRZ29_02175 PF01795 MraW methylase family NRZ29_02180 PF04999 Cell division protein FtsL NRZ29_02185 PF00905 Penicillin binding protein transpeptidase domain NRZ29_02185 PF03717 Penicillin-binding Protein dimerisation domain NRZ29_02190 PF01225 Mur ligase family, catalytic domain NRZ29_02190 PF08245 Mur ligase middle domain NRZ29_02190 PF02875 Mur ligase family, glutamate ligase domain NRZ29_02195 PF08245 Mur ligase middle domain NRZ29_02195 PF02875 Mur ligase family, glutamate ligase domain NRZ29_02195 PF01225 Mur ligase family, catalytic domain NRZ29_02200 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NRZ29_02200 PF00953 Glycosyl transferase family 4 NRZ29_02205 PF02875 Mur ligase family, glutamate ligase domain NRZ29_02205 PF08245 Mur ligase middle domain NRZ29_02210 PF01098 Cell cycle protein NRZ29_02215 PF03033 Glycosyltransferase family 28 N-terminal domain NRZ29_02215 PF04101 Glycosyltransferase family 28 C-terminal domain NRZ29_02220 PF02875 Mur ligase family, glutamate ligase domain NRZ29_02220 PF01225 Mur ligase family, catalytic domain NRZ29_02220 PF08245 Mur ligase middle domain NRZ29_02225 PF03799 Cell division protein FtsQ NRZ29_02225 PF08478 POTRA domain, FtsQ-type NRZ29_02230 PF02491 SHS2 domain inserted in FTSA NRZ29_02235 PF12327 FtsZ family, C-terminal domain NRZ29_02235 PF00091 Tubulin/FtsZ family, GTPase domain NRZ29_02240 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NRZ29_02250 PF01043 SecA preprotein cross-linking domain NRZ29_02250 PF02810 SEC-C motif NRZ29_02250 PF07517 SecA DEAD-like domain NRZ29_02250 PF07516 SecA Wing and Scaffold domain NRZ29_02260 PF00293 NUDIX domain NRZ29_02265 PF03884 DNA gyrase inhibitor YacG NRZ29_02270 PF07072 Cell division protein NRZ29_02275 PF01121 Dephospho-CoA kinase NRZ29_02280 PF01478 Type IV leader peptidase family NRZ29_02280 PF06750 Bacterial Peptidase A24 N-terminal domain NRZ29_02285 PF00482 Type II secretion system (T2SS), protein F NRZ29_02290 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NRZ29_02290 PF00437 Type II/IV secretion system protein NRZ29_02295 PF07963 Prokaryotic N-terminal methylation motif NRZ29_02300 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NRZ29_02300 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NRZ29_02310 PF01510 N-acetylmuramoyl-L-alanine amidase NRZ29_02315 PF00392 Bacterial regulatory proteins, gntR family NRZ29_02315 PF07729 FCD domain NRZ29_02320 PF00456 Transketolase, thiamine diphosphate binding domain NRZ29_02320 PF17831 Pyruvate dehydrogenase E1 component middle domain NRZ29_02325 PF00364 Biotin-requiring enzyme NRZ29_02325 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NRZ29_02325 PF02817 e3 binding domain NRZ29_02330 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ29_02330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRZ29_02340 PF12729 Four helix bundle sensory module for signal transduction NRZ29_02340 PF00672 HAMP domain NRZ29_02340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_02345 PF12729 Four helix bundle sensory module for signal transduction NRZ29_02345 PF00672 HAMP domain NRZ29_02345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_02350 PF01734 Patatin-like phospholipase NRZ29_02355 PF00330 Aconitase family (aconitate hydratase) NRZ29_02355 PF06434 Aconitate hydratase 2 N-terminus NRZ29_02355 PF11791 Aconitate B N-terminal domain NRZ29_02360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_02360 PF03466 LysR substrate binding domain NRZ29_02365 PF01810 LysE type translocator NRZ29_02370 PF01565 FAD binding domain NRZ29_02370 PF04030 D-arabinono-1,4-lactone oxidase NRZ29_02375 PF07683 Cobalamin synthesis protein cobW C-terminal domain NRZ29_02375 PF02492 CobW/HypB/UreG, nucleotide-binding domain NRZ29_02380 PF07690 Major Facilitator Superfamily NRZ29_02390 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NRZ29_02395 PF02152 Dihydroneopterin aldolase NRZ29_02400 PF02660 Glycerol-3-phosphate acyltransferase NRZ29_02435 PF07670 Nucleoside recognition NRZ29_02440 PF01584 CheW-like domain NRZ29_02440 PF00072 Response regulator receiver domain NRZ29_02450 PF08351 Domain of unknown function (DUF1726) NRZ29_02450 PF05127 Helicase NRZ29_02450 PF17176 tRNA-binding domain NRZ29_02450 PF13718 GNAT acetyltransferase 2 NRZ29_02465 PF00210 Ferritin-like domain NRZ29_02475 PF02142 MGS-like domain NRZ29_02490 PF17763 Glutaminase/Asparaginase C-terminal domain NRZ29_02490 PF00710 Asparaginase, N-terminal NRZ29_02505 PF00356 Bacterial regulatory proteins, lacI family NRZ29_02510 PF02378 Phosphotransferase system, EIIC NRZ29_02510 PF00367 phosphotransferase system, EIIB NRZ29_02515 PF00128 Alpha amylase, catalytic domain NRZ29_02515 PF11941 Domain of unknown function (DUF3459) NRZ29_02520 PF14602 Hexapeptide repeat of succinyl-transferase NRZ29_02520 PF12464 Maltose acetyltransferase NRZ29_02530 PF00171 Aldehyde dehydrogenase family NRZ29_02535 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_02540 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_02545 PF00005 ABC transporter NRZ29_02545 PF08402 TOBE domain NRZ29_02550 PF13416 Bacterial extracellular solute-binding protein NRZ29_02555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_02555 PF03466 LysR substrate binding domain NRZ29_02560 PF03553 Na+/H+ antiporter family NRZ29_02580 PF08323 Starch synthase catalytic domain NRZ29_02580 PF00534 Glycosyl transferases group 1 NRZ29_02585 PF00483 Nucleotidyl transferase NRZ29_02590 PF05175 Methyltransferase small domain NRZ29_02590 PF08468 Methyltransferase small domain N-terminal NRZ29_02595 PF00701 Dihydrodipicolinate synthetase family NRZ29_02600 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_02600 PF00360 Phytochrome region NRZ29_02600 PF01590 GAF domain NRZ29_02600 PF00563 EAL domain NRZ29_02610 PF13419 Haloacid dehalogenase-like hydrolase NRZ29_02615 PF17209 Hfq protein NRZ29_02620 PF04403 Paraquat-inducible protein A NRZ29_02625 PF02470 MlaD protein NRZ29_02630 PF03886 ABC-type transport auxiliary lipoprotein component NRZ29_02635 PF00691 OmpA family NRZ29_02635 PF01389 OmpA-like transmembrane domain NRZ29_02645 PF00657 GDSL-like Lipase/Acylhydrolase NRZ29_02650 PF04076 Bacterial OB fold (BOF) protein NRZ29_02655 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NRZ29_02655 PF01464 Transglycosylase SLT domain NRZ29_02660 PF04362 Bacterial Fe(2+) trafficking NRZ29_02665 PF00633 Helix-hairpin-helix motif NRZ29_02665 PF00730 HhH-GPD superfamily base excision DNA repair protein NRZ29_02665 PF14815 NUDIX domain NRZ29_02665 PF10576 Iron-sulfur binding domain of endonuclease III NRZ29_02670 PF16537 Type II secretion system protein B NRZ29_02675 PF13401 AAA domain NRZ29_02675 PF01471 Putative peptidoglycan binding domain NRZ29_02680 PF01966 HD domain NRZ29_02680 PF01743 Poly A polymerase head domain NRZ29_02680 PF12627 Probable RNA and SrmB- binding site of polymerase A NRZ29_02695 PF04172 LrgB-like family NRZ29_02700 PF03788 LrgA family NRZ29_02705 PF03466 LysR substrate binding domain NRZ29_02705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_02715 PF00155 Aminotransferase class I and II NRZ29_02715 PF00392 Bacterial regulatory proteins, gntR family NRZ29_02735 PF07350 Protein of unknown function (DUF1479) NRZ29_02740 PF04073 Aminoacyl-tRNA editing domain NRZ29_02745 PF01384 Phosphate transporter family NRZ29_02750 PF01865 Protein of unknown function DUF47 NRZ29_02765 PF03279 Bacterial lipid A biosynthesis acyltransferase NRZ29_02770 PF01467 Cytidylyltransferase-like NRZ29_02770 PF00294 pfkB family carbohydrate kinase NRZ29_02775 PF02321 Outer membrane efflux protein NRZ29_02780 PF00293 NUDIX domain NRZ29_02785 PF06853 Protein of unknown function (DUF1249) NRZ29_02790 PF00149 Calcineurin-like phosphoesterase NRZ29_02795 PF05728 Uncharacterised protein family (UPF0227) NRZ29_02800 PF00293 NUDIX domain NRZ29_02810 PF07869 Protein of unknown function (DUF1656) NRZ29_02815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ29_02815 PF00529 HlyD membrane-fusion protein of T1SS NRZ29_02820 PF04632 Fusaric acid resistance protein family NRZ29_02825 PF00986 DNA gyrase B subunit, carboxyl terminus NRZ29_02825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_02825 PF01751 Toprim domain NRZ29_02825 PF00204 DNA gyrase B NRZ29_02830 PF03989 DNA gyrase C-terminal domain, beta-propeller NRZ29_02830 PF00521 DNA gyrase/topoisomerase IV, subunit A NRZ29_02840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_02840 PF03466 LysR substrate binding domain NRZ29_02845 PF07690 Major Facilitator Superfamily NRZ29_02860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_02860 PF03466 LysR substrate binding domain NRZ29_02890 PF00226 DnaJ domain NRZ29_02890 PF01556 DnaJ C terminal domain NRZ29_02890 PF00684 DnaJ central domain NRZ29_02895 PF00578 AhpC/TSA family NRZ29_02915 PF01553 Acyltransferase NRZ29_02920 PF04012 PspA/IM30 family NRZ29_02935 PF01541 GIY-YIG catalytic domain NRZ29_02945 PF00892 EamA-like transporter family NRZ29_02950 PF03167 Uracil DNA glycosylase superfamily NRZ29_02955 PF00892 EamA-like transporter family NRZ29_02960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_02960 PF03466 LysR substrate binding domain NRZ29_02965 PF00950 ABC 3 transport family NRZ29_02970 PF00005 ABC transporter NRZ29_02975 PF01297 Zinc-uptake complex component A periplasmic NRZ29_02995 PF01476 LysM domain NRZ29_02995 PF08525 Opacity-associated protein A N-terminal motif NRZ29_02995 PF01551 Peptidase family M23 NRZ29_03000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRZ29_03005 PF04222 Protein of unknown function (DUF416) NRZ29_03020 PF02028 BCCT, betaine/carnitine/choline family transporter NRZ29_03025 PF01624 MutS domain I NRZ29_03025 PF00488 MutS domain V NRZ29_03025 PF05190 MutS family domain IV NRZ29_03025 PF05192 MutS domain III NRZ29_03025 PF05188 MutS domain II NRZ29_03030 PF02464 Competence-damaged protein NRZ29_03035 PF00154 recA bacterial DNA recombination protein NRZ29_03040 PF02631 RecX family NRZ29_03045 PF02272 DHHA1 domain NRZ29_03045 PF01411 tRNA synthetases class II (A) NRZ29_03045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NRZ29_03050 PF00696 Amino acid kinase family NRZ29_03050 PF01842 ACT domain NRZ29_03050 PF13840 ACT domain NRZ29_03055 PF02599 Global regulator protein family NRZ29_03090 PF00768 D-alanyl-D-alanine carboxypeptidase NRZ29_03095 PF09335 SNARE associated Golgi protein NRZ29_03100 PF01595 Cyclin M transmembrane N-terminal domain NRZ29_03100 PF03471 Transporter associated domain NRZ29_03100 PF00571 CBS domain NRZ29_03105 PF10458 Valyl tRNA synthetase tRNA binding arm NRZ29_03105 PF00133 tRNA synthetases class I (I, L, M and V) NRZ29_03105 PF08264 Anticodon-binding domain of tRNA NRZ29_03110 PF04364 DNA polymerase III chi subunit, HolC NRZ29_03115 PF02789 Cytosol aminopeptidase family, N-terminal domain NRZ29_03115 PF00883 Cytosol aminopeptidase family, catalytic domain NRZ29_03120 PF03739 Lipopolysaccharide export system permease LptF/LptG NRZ29_03125 PF03739 Lipopolysaccharide export system permease LptF/LptG NRZ29_03140 PF00909 Ammonium Transporter Family NRZ29_03145 PF01938 TRAM domain NRZ29_03145 PF05958 tRNA (Uracil-5-)-methyltransferase NRZ29_03155 PF07963 Prokaryotic N-terminal methylation motif NRZ29_03160 PF01026 TatD related DNase NRZ29_03165 PF07670 Nucleoside recognition NRZ29_03165 PF01773 Na+ dependent nucleoside transporter N-terminus NRZ29_03165 PF07662 Na+ dependent nucleoside transporter C-terminus NRZ29_03175 PF01791 DeoC/LacD family aldolase NRZ29_03180 PF02885 Glycosyl transferase family, helical bundle domain NRZ29_03180 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NRZ29_03180 PF00591 Glycosyl transferase family, a/b domain NRZ29_03185 PF01676 Metalloenzyme superfamily NRZ29_03190 PF01048 Phosphorylase superfamily NRZ29_03195 PF13426 PAS domain NRZ29_03195 PF05231 MASE1 NRZ29_03195 PF00563 EAL domain NRZ29_03195 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_03195 PF08448 PAS fold NRZ29_03195 PF08447 PAS fold NRZ29_03205 PF18429 Domain of unknown function (DUF5609) NRZ29_03220 PF18073 Rubredoxin metal binding domain NRZ29_03225 PF07238 PilZ domain NRZ29_03230 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ NRZ29_03240 PF00216 Bacterial DNA-binding protein NRZ29_03255 PF01207 Dihydrouridine synthase (Dus) NRZ29_03260 PF01475 Ferric uptake regulator family NRZ29_03275 PF05525 Branched-chain amino acid transport protein NRZ29_03280 PF05525 Branched-chain amino acid transport protein NRZ29_03285 PF05175 Methyltransferase small domain NRZ29_03290 PF00271 Helicase conserved C-terminal domain NRZ29_03290 PF00270 DEAD/DEAH box helicase NRZ29_03295 PF03883 Peroxide stress protein YaaA NRZ29_03300 PF00437 Type II/IV secretion system protein NRZ29_03305 PF00437 Type II/IV secretion system protein NRZ29_03310 PF01168 Alanine racemase, N-terminal domain NRZ29_03315 PF03807 NADP oxidoreductase coenzyme F420-dependent NRZ29_03315 PF14748 Pyrroline-5-carboxylate reductase dimerisation NRZ29_03320 PF02325 YGGT family NRZ29_03325 PF02594 Uncharacterised ACR, YggU family COG1872 NRZ29_03340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ29_03350 PF00132 Bacterial transferase hexapeptide (six repeats) NRZ29_03355 PF10952 Protein of unknown function (DUF2753) NRZ29_03360 PF00378 Enoyl-CoA hydratase/isomerase NRZ29_03375 PF00106 short chain dehydrogenase NRZ29_03380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NRZ29_03380 PF03129 Anticodon binding domain NRZ29_03380 PF04073 Aminoacyl-tRNA editing domain NRZ29_03385 PF00672 HAMP domain NRZ29_03385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_03390 PF01330 RuvA N terminal domain NRZ29_03390 PF07499 RuvA, C-terminal domain NRZ29_03395 PF05496 Holliday junction DNA helicase RuvB P-loop domain NRZ29_03395 PF17864 RuvB AAA lid domain NRZ29_03395 PF05491 RuvB C-terminal winged helix domain NRZ29_03400 PF01654 Cytochrome bd terminal oxidase subunit I NRZ29_03405 PF02322 Cytochrome bd terminal oxidase subunit II NRZ29_03410 PF08173 Membrane bound YbgT-like protein NRZ29_03415 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) NRZ29_03420 PF03061 Thioesterase superfamily NRZ29_03425 PF01618 MotA/TolQ/ExbB proton channel family NRZ29_03430 PF02472 Biopolymer transport protein ExbD/TolR NRZ29_03440 PF04052 TolB amino-terminal domain NRZ29_03440 PF07676 WD40-like Beta Propeller Repeat NRZ29_03445 PF00691 OmpA family NRZ29_03450 PF16331 TolA binding protein trimerisation NRZ29_03450 PF13174 Tetratricopeptide repeat NRZ29_03525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_03525 PF00672 HAMP domain NRZ29_03530 PF02445 Quinolinate synthetase A protein NRZ29_03535 PF01263 Aldose 1-epimerase NRZ29_03540 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NRZ29_03540 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NRZ29_03545 PF02446 4-alpha-glucanotransferase NRZ29_03550 PF00128 Alpha amylase, catalytic domain NRZ29_03550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NRZ29_03550 PF02806 Alpha amylase, C-terminal all-beta domain NRZ29_03555 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NRZ29_03555 PF00128 Alpha amylase, catalytic domain NRZ29_03560 PF01641 SelR domain NRZ29_03570 PF00293 NUDIX domain NRZ29_03575 PF00107 Zinc-binding dehydrogenase NRZ29_03575 PF16884 N-terminal domain of oxidoreductase NRZ29_03580 PF02566 OsmC-like protein NRZ29_03585 PF01047 MarR family NRZ29_03600 PF01037 Lrp/AsnC ligand binding domain NRZ29_03615 PF07690 Major Facilitator Superfamily NRZ29_03635 PF00209 Sodium:neurotransmitter symporter family NRZ29_03645 PF00209 Sodium:neurotransmitter symporter family NRZ29_03670 PF00392 Bacterial regulatory proteins, gntR family NRZ29_03670 PF00155 Aminotransferase class I and II NRZ29_03680 PF01810 LysE type translocator NRZ29_03685 PF01177 Asp/Glu/Hydantoin racemase NRZ29_03690 PF00394 Multicopper oxidase NRZ29_03690 PF07732 Multicopper oxidase NRZ29_03690 PF07731 Multicopper oxidase NRZ29_03695 PF07732 Multicopper oxidase NRZ29_03695 PF07731 Multicopper oxidase NRZ29_03695 PF00394 Multicopper oxidase NRZ29_03705 PF04074 YhcH/YjgK/YiaL NRZ29_03710 PF00871 Acetokinase family NRZ29_03715 PF00924 Mechanosensitive ion channel NRZ29_03720 PF03734 L,D-transpeptidase catalytic domain NRZ29_03720 PF17969 L,D-transpeptidase C-terminal domain NRZ29_03725 PF00474 Sodium:solute symporter family NRZ29_03735 PF06877 Regulator of ribonuclease activity B NRZ29_03750 PF02525 Flavodoxin-like fold NRZ29_03755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_03755 PF03466 LysR substrate binding domain NRZ29_03760 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NRZ29_03770 PF00005 ABC transporter NRZ29_03770 PF12848 ABC transporter NRZ29_03775 PF01380 SIS domain NRZ29_03775 PF00571 CBS domain NRZ29_03780 PF01957 NfeD-like C-terminal, partner-binding NRZ29_03785 PF01145 SPFH domain / Band 7 family NRZ29_03785 PF16200 C-terminal region of band_7 NRZ29_03790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NRZ29_03790 PF14824 Sirohaem biosynthesis protein central NRZ29_03790 PF10414 Sirohaem synthase dimerisation region NRZ29_03795 PF01507 Phosphoadenosine phosphosulfate reductase family NRZ29_03800 PF00009 Elongation factor Tu GTP binding domain NRZ29_03805 PF03600 Citrate transporter NRZ29_03805 PF02080 TrkA-C domain NRZ29_03850 PF00043 Glutathione S-transferase, C-terminal domain NRZ29_03850 PF02798 Glutathione S-transferase, N-terminal domain NRZ29_03870 PF00005 ABC transporter NRZ29_03885 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) NRZ29_03900 PF00719 Inorganic pyrophosphatase NRZ29_03905 PF01225 Mur ligase family, catalytic domain NRZ29_03905 PF02875 Mur ligase family, glutamate ligase domain NRZ29_03905 PF08245 Mur ligase middle domain NRZ29_03910 PF02441 Flavoprotein NRZ29_03915 PF00440 Bacterial regulatory proteins, tetR family NRZ29_03920 PF00156 Phosphoribosyl transferase domain NRZ29_03925 PF00005 ABC transporter NRZ29_03930 PF01061 ABC-2 type transporter NRZ29_03935 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component NRZ29_03940 PF01869 BadF/BadG/BcrA/BcrD ATPase family NRZ29_03960 PF00375 Sodium:dicarboxylate symporter family NRZ29_03965 PF02569 Pantoate-beta-alanine ligase NRZ29_03970 PF02548 Ketopantoate hydroxymethyltransferase NRZ29_03975 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NRZ29_03980 PF01743 Poly A polymerase head domain NRZ29_03980 PF12627 Probable RNA and SrmB- binding site of polymerase A NRZ29_03980 PF12626 Polymerase A arginine-rich C-terminus NRZ29_03985 PF00749 tRNA synthetases class I (E and Q), catalytic domain NRZ29_03990 PF01258 Prokaryotic dksA/traR C4-type zinc finger NRZ29_03995 PF17746 SfsA N-terminal OB domain NRZ29_03995 PF03749 Sugar fermentation stimulation protein RE domain NRZ29_04005 PF00270 DEAD/DEAH box helicase NRZ29_04005 PF04408 Helicase associated domain (HA2) NRZ29_04005 PF00271 Helicase conserved C-terminal domain NRZ29_04005 PF08482 ATP-dependent helicase C-terminal NRZ29_04010 PF00912 Transglycosylase NRZ29_04010 PF00905 Penicillin binding protein transpeptidase domain NRZ29_04010 PF14814 Bifunctional transglycosylase second domain NRZ29_04015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRZ29_04020 PF00893 Small Multidrug Resistance protein NRZ29_04025 PF00893 Small Multidrug Resistance protein NRZ29_04035 PF11849 Domain of unknown function (DUF3369) NRZ29_04045 PF01569 PAP2 superfamily NRZ29_04060 PF00202 Aminotransferase class-III NRZ29_04065 PF00654 Voltage gated chloride channel NRZ29_04075 PF01521 Iron-sulphur cluster biosynthesis NRZ29_04105 PF02867 Ribonucleotide reductase, barrel domain NRZ29_04105 PF00317 Ribonucleotide reductase, all-alpha domain NRZ29_04105 PF08343 Ribonucleotide reductase N-terminal NRZ29_04115 PF02562 PhoH-like protein NRZ29_04115 PF13638 PIN domain NRZ29_04120 PF00005 ABC transporter NRZ29_04125 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_04145 PF00694 Aconitase C-terminal domain NRZ29_04150 PF00330 Aconitase family (aconitate hydratase) NRZ29_04155 PF00180 Isocitrate/isopropylmalate dehydrogenase NRZ29_04160 PF00682 HMGL-like NRZ29_04160 PF08502 LeuA allosteric (dimerisation) domain NRZ29_04170 PF01569 PAP2 superfamily NRZ29_04175 PF03033 Glycosyltransferase family 28 N-terminal domain NRZ29_04175 PF04101 Glycosyltransferase family 28 C-terminal domain NRZ29_04185 PF00205 Thiamine pyrophosphate enzyme, central domain NRZ29_04185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NRZ29_04185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRZ29_04190 PF10369 Small subunit of acetolactate synthase NRZ29_04195 PF07085 DRTGG domain NRZ29_04195 PF01515 Phosphate acetyl/butaryl transferase NRZ29_04200 PF00871 Acetokinase family NRZ29_04205 PF04217 Protein of unknown function, DUF412 NRZ29_04210 PF03887 YfbU domain NRZ29_04215 PF00578 AhpC/TSA family NRZ29_04220 PF01842 ACT domain NRZ29_04225 PF00701 Dihydrodipicolinate synthetase family NRZ29_04230 PF06804 NlpB/DapX lipoprotein NRZ29_04235 PF01259 SAICAR synthetase NRZ29_04245 PF03466 LysR substrate binding domain NRZ29_04245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_04250 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NRZ29_04270 PF00072 Response regulator receiver domain NRZ29_04270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_04270 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_04270 PF18415 Histidine kinase receptor ArcB trans-membrane domain NRZ29_04270 PF01627 Hpt domain NRZ29_04270 PF00989 PAS fold NRZ29_04275 PF01966 HD domain NRZ29_04275 PF13286 Phosphohydrolase-associated domain NRZ29_04285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_04285 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_04285 PF09456 RcsC Alpha-Beta-Loop (ABL) NRZ29_04285 PF00072 Response regulator receiver domain NRZ29_04290 PF00563 EAL domain NRZ29_04290 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_04290 PF03707 Bacterial signalling protein N terminal repeat NRZ29_04295 PF12729 Four helix bundle sensory module for signal transduction NRZ29_04295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_04295 PF00672 HAMP domain NRZ29_04310 PF02357 Transcription termination factor nusG NRZ29_04315 PF03180 NLPA lipoprotein NRZ29_04320 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_04325 PF09383 NIL domain NRZ29_04325 PF00005 ABC transporter NRZ29_04335 PF00480 ROK family NRZ29_04340 PF08331 Domain of unknown function (DUF1730) NRZ29_04345 PF03853 YjeF-related protein N-terminus NRZ29_04345 PF01256 Carbohydrate kinase NRZ29_04350 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NRZ29_04355 PF01520 N-acetylmuramoyl-L-alanine amidase NRZ29_04360 PF08676 MutL C terminal dimerisation domain NRZ29_04360 PF01119 DNA mismatch repair protein, C-terminal domain NRZ29_04370 PF17209 Hfq protein NRZ29_04375 PF16360 GTP-binding GTPase Middle Region NRZ29_04375 PF13167 GTP-binding GTPase N-terminal NRZ29_04375 PF01926 50S ribosome-binding GTPase NRZ29_04380 PF12221 Bacterial membrane protein N terminal NRZ29_04380 PF01145 SPFH domain / Band 7 family NRZ29_04385 PF01145 SPFH domain / Band 7 family NRZ29_04390 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) NRZ29_04395 PF00348 Polyprenyl synthetase NRZ29_04400 PF00829 Ribosomal prokaryotic L21 protein NRZ29_04405 PF01016 Ribosomal L27 protein NRZ29_04410 PF01018 GTP1/OBG NRZ29_04410 PF01926 50S ribosome-binding GTPase NRZ29_04415 PF07670 Nucleoside recognition NRZ29_04420 PF13193 AMP-binding enzyme C-terminal domain NRZ29_04420 PF00501 AMP-binding enzyme NRZ29_04440 PF00296 Luciferase-like monooxygenase NRZ29_04450 PF00149 Calcineurin-like phosphoesterase NRZ29_04455 PF04379 ApaG domain NRZ29_04460 PF00398 Ribosomal RNA adenine dimethylase NRZ29_04465 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NRZ29_04470 PF00639 PPIC-type PPIASE domain NRZ29_04470 PF09312 SurA N-terminal domain NRZ29_04475 PF04453 LPS transport system D NRZ29_04475 PF03968 OstA-like protein NRZ29_04480 PF01636 Phosphotransferase enzyme family NRZ29_04485 PF00483 Nucleotidyl transferase NRZ29_04490 PF00226 DnaJ domain NRZ29_04490 PF05099 Tellurite resistance protein TerB NRZ29_04495 PF00860 Permease family NRZ29_04505 PF00005 ABC transporter NRZ29_04505 PF12848 ABC transporter NRZ29_04520 PF01048 Phosphorylase superfamily NRZ29_04525 PF01464 Transglycosylase SLT domain NRZ29_04540 PF03466 LysR substrate binding domain NRZ29_04540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_04545 PF01048 Phosphorylase superfamily NRZ29_04550 PF07670 Nucleoside recognition NRZ29_04550 PF07662 Na+ dependent nucleoside transporter C-terminus NRZ29_04550 PF01773 Na+ dependent nucleoside transporter N-terminus NRZ29_04555 PF01791 DeoC/LacD family aldolase NRZ29_04565 PF01370 NAD dependent epimerase/dehydratase family NRZ29_04575 PF00005 ABC transporter NRZ29_04580 PF01032 FecCD transport family NRZ29_04590 PF06228 Haem utilisation ChuX/HutX NRZ29_04595 PF01243 Pyridoxamine 5'-phosphate oxidase NRZ29_04615 PF07715 TonB-dependent Receptor Plug Domain NRZ29_04615 PF00593 TonB dependent receptor NRZ29_04620 PF12832 MFS_1 like family NRZ29_04625 PF13443 Cro/C1-type HTH DNA-binding domain NRZ29_04635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_04635 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_04635 PF00989 PAS fold NRZ29_04640 PF08329 Chitinase A, N-terminal domain NRZ29_04640 PF00704 Glycosyl hydrolases family 18 NRZ29_04645 PF12561 ToxR activated gene A lipoprotein domain NRZ29_04645 PF17945 Beta/Gamma crystallin NRZ29_04650 PF18416 N-acetylglucosamine binding protein domain 2 NRZ29_04650 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NRZ29_04655 PF13847 Methyltransferase domain NRZ29_04660 PF00027 Cyclic nucleotide-binding domain NRZ29_04660 PF13545 Crp-like helix-turn-helix domain NRZ29_04665 PF02566 OsmC-like protein NRZ29_04680 PF00485 Phosphoribulokinase / Uridine kinase family NRZ29_04685 PF00893 Small Multidrug Resistance protein NRZ29_04690 PF00892 EamA-like transporter family NRZ29_04695 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NRZ29_04700 PF01522 Polysaccharide deacetylase NRZ29_04705 PF01370 NAD dependent epimerase/dehydratase family NRZ29_04705 PF00551 Formyl transferase NRZ29_04705 PF02911 Formyl transferase, C-terminal domain NRZ29_04710 PF00535 Glycosyl transferase family 2 NRZ29_04715 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NRZ29_04720 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NRZ29_04720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NRZ29_04720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NRZ29_04725 PF06794 Uncharacterised protein family (UPF0270) NRZ29_04730 PF00360 Phytochrome region NRZ29_04730 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_04730 PF01590 GAF domain NRZ29_04730 PF00563 EAL domain NRZ29_04735 PF00561 alpha/beta hydrolase fold NRZ29_04740 PF01584 CheW-like domain NRZ29_04740 PF00072 Response regulator receiver domain NRZ29_04750 PF09526 Probable metal-binding protein (DUF2387) NRZ29_04755 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRZ29_04760 PF04102 SlyX NRZ29_04770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRZ29_04770 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NRZ29_04775 PF02954 Bacterial regulatory protein, Fis family NRZ29_04775 PF00072 Response regulator receiver domain NRZ29_04775 PF00158 Sigma-54 interaction domain NRZ29_04795 PF02872 5'-nucleotidase, C-terminal domain NRZ29_04795 PF00149 Calcineurin-like phosphoesterase NRZ29_04800 PF00563 EAL domain NRZ29_04800 PF12792 CSS motif domain associated with EAL NRZ29_04810 PF00772 DnaB-like helicase N terminal domain NRZ29_04810 PF03796 DnaB-like helicase C terminal domain NRZ29_04815 PF00842 Alanine racemase, C-terminal domain NRZ29_04815 PF01168 Alanine racemase, N-terminal domain NRZ29_04825 PF12838 4Fe-4S dicluster domain NRZ29_04830 PF01136 Peptidase family U32 NRZ29_04830 PF16325 Peptidase family U32 C-terminal domain NRZ29_04835 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_04835 PF00563 EAL domain NRZ29_04835 PF01590 GAF domain NRZ29_04835 PF00989 PAS fold NRZ29_04850 PF15976 CS1-pili formation C-terminal NRZ29_04850 PF16967 E-set like domain NRZ29_04860 PF00196 Bacterial regulatory proteins, luxR family NRZ29_04860 PF00072 Response regulator receiver domain NRZ29_04865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_04865 PF00989 PAS fold NRZ29_04865 PF00072 Response regulator receiver domain NRZ29_04865 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_04865 PF01627 Hpt domain NRZ29_04865 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ29_04890 PF00266 Aminotransferase class-V NRZ29_04895 PF01339 CheB methylesterase NRZ29_04895 PF00072 Response regulator receiver domain NRZ29_04900 PF03975 CheD chemotactic sensory transduction NRZ29_04905 PF01739 CheR methyltransferase, SAM binding domain NRZ29_04905 PF03705 CheR methyltransferase, all-alpha domain NRZ29_04910 PF00672 HAMP domain NRZ29_04910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_04910 PF02203 Tar ligand binding domain homologue NRZ29_04915 PF01584 CheW-like domain NRZ29_04920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_04920 PF00672 HAMP domain NRZ29_04920 PF12729 Four helix bundle sensory module for signal transduction NRZ29_04925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_04925 PF02895 Signal transducing histidine kinase, homodimeric domain NRZ29_04925 PF01584 CheW-like domain NRZ29_04925 PF01627 Hpt domain NRZ29_04925 PF07194 P2 response regulator binding domain NRZ29_04935 PF00072 Response regulator receiver domain NRZ29_04940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_04940 PF00672 HAMP domain NRZ29_04940 PF02743 Cache domain NRZ29_04945 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NRZ29_04945 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NRZ29_04950 PF03466 LysR substrate binding domain NRZ29_04950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_04955 PF01810 LysE type translocator NRZ29_04960 PF12392 Collagenase NRZ29_04960 PF01136 Peptidase family U32 NRZ29_04975 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NRZ29_04975 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NRZ29_04980 PF12833 Helix-turn-helix domain NRZ29_04980 PF00730 HhH-GPD superfamily base excision DNA repair protein NRZ29_04980 PF06029 AlkA N-terminal domain NRZ29_04980 PF02805 Metal binding domain of Ada NRZ29_04990 PF02074 Carboxypeptidase Taq (M32) metallopeptidase NRZ29_05015 PF00106 short chain dehydrogenase NRZ29_05020 PF03573 outer membrane porin, OprD family NRZ29_05025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_05025 PF00672 HAMP domain NRZ29_05025 PF02743 Cache domain NRZ29_05035 PF02447 GntP family permease NRZ29_05040 PF01370 NAD dependent epimerase/dehydratase family NRZ29_05045 PF01261 Xylose isomerase-like TIM barrel NRZ29_05050 PF00596 Class II Aldolase and Adducin N-terminal domain NRZ29_05055 PF07005 Sugar-binding N-terminal domain NRZ29_05055 PF17042 Nucleotide-binding C-terminal domain NRZ29_05060 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NRZ29_05060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NRZ29_05065 PF08220 DeoR-like helix-turn-helix domain NRZ29_05065 PF00455 DeoR C terminal sensor domain NRZ29_05095 PF00271 Helicase conserved C-terminal domain NRZ29_05110 PF01555 DNA methylase NRZ29_05135 PF00239 Resolvase, N terminal domain NRZ29_05135 PF02796 Helix-turn-helix domain of resolvase NRZ29_05145 PF09588 YqaJ-like viral recombinase domain NRZ29_05175 PF00800 Prephenate dehydratase NRZ29_05175 PF01817 Chorismate mutase type II NRZ29_05205 PF08349 Protein of unknown function (DUF1722) NRZ29_05210 PF13411 MerR HTH family regulatory protein NRZ29_05215 PF03441 FAD binding domain of DNA photolyase NRZ29_05215 PF00875 DNA photolyase NRZ29_05225 PF00106 short chain dehydrogenase NRZ29_05265 PF00210 Ferritin-like domain NRZ29_05270 PF03063 Prismane/CO dehydrogenase family NRZ29_05275 PF00042 Globin NRZ29_05275 PF00970 Oxidoreductase FAD-binding domain NRZ29_05275 PF00175 Oxidoreductase NAD-binding domain NRZ29_05280 PF16363 GDP-mannose 4,6 dehydratase NRZ29_05285 PF13462 Thioredoxin NRZ29_05285 PF06965 Na+/H+ antiporter 1 NRZ29_05295 PF00196 Bacterial regulatory proteins, luxR family NRZ29_05295 PF03472 Autoinducer binding domain NRZ29_05300 PF05638 Type VI secretion system effector, Hcp NRZ29_05310 PF04717 Type VI secretion system, phage-baseplate injector NRZ29_05330 PF03466 LysR substrate binding domain NRZ29_05330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_05335 PF03306 Alpha-acetolactate decarboxylase NRZ29_05340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NRZ29_05340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRZ29_05340 PF00205 Thiamine pyrophosphate enzyme, central domain NRZ29_05345 PF01965 DJ-1/PfpI family NRZ29_05350 PF02558 Ketopantoate reductase PanE/ApbA NRZ29_05350 PF08546 Ketopantoate reductase PanE/ApbA C terminal NRZ29_05355 PF04461 Protein of unknown function (DUF520) NRZ29_05360 PF03502 Nucleoside-specific channel-forming protein, Tsx NRZ29_05365 PF07690 Major Facilitator Superfamily NRZ29_05375 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NRZ29_05385 PF05175 Methyltransferase small domain NRZ29_05390 PF01722 BolA-like protein NRZ29_05395 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) NRZ29_05395 PF11973 NQRA C-terminal domain NRZ29_05400 PF03116 NQR2, RnfD, RnfE family NRZ29_05405 PF04205 FMN-binding domain NRZ29_05410 PF02508 Rnf-Nqr subunit, membrane protein NRZ29_05415 PF02508 Rnf-Nqr subunit, membrane protein NRZ29_05420 PF00175 Oxidoreductase NAD-binding domain NRZ29_05420 PF00970 Oxidoreductase FAD-binding domain NRZ29_05420 PF00111 2Fe-2S iron-sulfur cluster binding domain NRZ29_05425 PF02424 ApbE family NRZ29_05440 PF11798 IMS family HHH motif NRZ29_05440 PF11799 impB/mucB/samB family C-terminal domain NRZ29_05440 PF00817 impB/mucB/samB family NRZ29_05445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_05445 PF00672 HAMP domain NRZ29_05450 PF03466 LysR substrate binding domain NRZ29_05450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_05460 PF04241 Protein of unknown function (DUF423) NRZ29_05465 PF18125 RlmM ferredoxin-like domain NRZ29_05465 PF01728 FtsJ-like methyltransferase NRZ29_05475 PF18324 Hypothetical protein TT1725 NRZ29_05475 PF00180 Isocitrate/isopropylmalate dehydrogenase NRZ29_05480 PF01367 5'-3' exonuclease, C-terminal SAM fold NRZ29_05480 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NRZ29_05485 PF11892 Domain of unknown function (DUF3412) NRZ29_05485 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NRZ29_05485 PF03641 Possible lysine decarboxylase NRZ29_05490 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_05500 PF14489 QueF-like protein NRZ29_05500 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NRZ29_05505 PF07348 Syd protein (SUKH-2) NRZ29_05510 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) NRZ29_05535 PF04287 tRNA pseudouridine synthase C NRZ29_05540 PF00849 RNA pseudouridylate synthase NRZ29_05545 PF00258 Flavodoxin NRZ29_05550 PF02264 LamB porin NRZ29_05555 PF07148 Maltose operon periplasmic protein precursor (MalM) NRZ29_05560 PF00367 phosphotransferase system, EIIB NRZ29_05560 PF02378 Phosphotransferase system, EIIC NRZ29_05565 PF11944 Protein of unknown function (DUF3461) NRZ29_05570 PF14602 Hexapeptide repeat of succinyl-transferase NRZ29_05570 PF00132 Bacterial transferase hexapeptide (six repeats) NRZ29_05570 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NRZ29_05575 PF01909 Nucleotidyltransferase domain NRZ29_05575 PF01966 HD domain NRZ29_05575 PF08335 GlnD PII-uridylyltransferase NRZ29_05575 PF01842 ACT domain NRZ29_05580 PF00557 Metallopeptidase family M24 NRZ29_05585 PF00318 Ribosomal protein S2 NRZ29_05590 PF00889 Elongation factor TS NRZ29_05595 PF00696 Amino acid kinase family NRZ29_05600 PF01765 Ribosome recycling factor NRZ29_05605 PF01255 Putative undecaprenyl diphosphate synthase NRZ29_05615 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NRZ29_05615 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NRZ29_05615 PF13288 DXP reductoisomerase C-terminal domain NRZ29_05620 PF17820 PDZ domain NRZ29_05620 PF02163 Peptidase family M50 NRZ29_05625 PF07244 Surface antigen variable number repeat NRZ29_05625 PF01103 Surface antigen NRZ29_05630 PF03938 Outer membrane protein (OmpH-like) NRZ29_05635 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NRZ29_05635 PF00132 Bacterial transferase hexapeptide (six repeats) NRZ29_05640 PF07977 FabA-like domain NRZ29_05645 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NRZ29_05645 PF00132 Bacterial transferase hexapeptide (six repeats) NRZ29_05650 PF02684 Lipid-A-disaccharide synthetase NRZ29_05655 PF01351 Ribonuclease HII NRZ29_05660 PF01336 OB-fold nucleic acid binding domain NRZ29_05660 PF02811 PHP domain NRZ29_05660 PF14579 Helix-hairpin-helix motif NRZ29_05660 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NRZ29_05660 PF07733 Bacterial DNA polymerase III alpha NTPase domain NRZ29_05665 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NRZ29_05670 PF18500 CadC C-terminal domain 1 NRZ29_05670 PF00486 Transcriptional regulatory protein, C terminal NRZ29_05675 PF13520 Amino acid permease NRZ29_05680 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NRZ29_05680 PF01276 Orn/Lys/Arg decarboxylase, major domain NRZ29_05680 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain NRZ29_05685 PF08543 Phosphomethylpyrimidine kinase NRZ29_05695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_05695 PF03466 LysR substrate binding domain NRZ29_05705 PF13520 Amino acid permease NRZ29_05710 PF13302 Acetyltransferase (GNAT) domain NRZ29_05715 PF00005 ABC transporter NRZ29_05715 PF16326 ABC transporter C-terminal domain NRZ29_05715 PF12848 ABC transporter NRZ29_05725 PF05649 Peptidase family M13 NRZ29_05725 PF01431 Peptidase family M13 NRZ29_05730 PF01171 PP-loop family NRZ29_05730 PF09179 TilS substrate binding domain NRZ29_05730 PF11734 TilS substrate C-terminal domain NRZ29_05735 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_05740 PF00999 Sodium/hydrogen exchanger family NRZ29_05740 PF02080 TrkA-C domain NRZ29_05740 PF02254 TrkA-N domain NRZ29_05765 PF00196 Bacterial regulatory proteins, luxR family NRZ29_05765 PF00072 Response regulator receiver domain NRZ29_05775 PF00128 Alpha amylase, catalytic domain NRZ29_05790 PF00535 Glycosyl transferase family 2 NRZ29_05805 PF01471 Putative peptidoglycan binding domain NRZ29_05805 PF03734 L,D-transpeptidase catalytic domain NRZ29_05810 PF05951 Bacterial protein of unknown function (DUF882) NRZ29_05820 PF03458 UPF0126 domain NRZ29_05830 PF06470 SMC proteins Flexible Hinge Domain NRZ29_05830 PF02463 RecF/RecN/SMC N terminal domain NRZ29_05835 PF04354 ZipA, C-terminal FtsZ-binding domain NRZ29_05840 PF00533 BRCA1 C Terminus (BRCT) domain NRZ29_05840 PF01653 NAD-dependent DNA ligase adenylation domain NRZ29_05840 PF03120 NAD-dependent DNA ligase OB-fold domain NRZ29_05840 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NRZ29_05840 PF12826 Helix-hairpin-helix motif NRZ29_05850 PF13597 Anaerobic ribonucleoside-triphosphate reductase NRZ29_05850 PF03477 ATP cone domain NRZ29_05860 PF01679 Proteolipid membrane potential modulator NRZ29_05885 PF00529 HlyD membrane-fusion protein of T1SS NRZ29_05885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ29_05890 PF01047 MarR family NRZ29_05900 PF03390 2-hydroxycarboxylate transporter family NRZ29_05905 PF03949 Malic enzyme, NAD binding domain NRZ29_05905 PF00390 Malic enzyme, N-terminal domain NRZ29_05910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_05910 PF00989 PAS fold NRZ29_05910 PF17203 Single cache domain 3 NRZ29_05910 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NRZ29_05915 PF12431 Transcriptional regulator NRZ29_05915 PF00072 Response regulator receiver domain NRZ29_05920 PF00892 EamA-like transporter family NRZ29_05930 PF00171 Aldehyde dehydrogenase family NRZ29_05935 PF00158 Sigma-54 interaction domain NRZ29_05935 PF01590 GAF domain NRZ29_05935 PF02954 Bacterial regulatory protein, Fis family NRZ29_05940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRZ29_05940 PF02770 Acyl-CoA dehydrogenase, middle domain NRZ29_05940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRZ29_05945 PF02515 CoA-transferase family III NRZ29_05950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRZ29_05955 PF00486 Transcriptional regulatory protein, C terminal NRZ29_05955 PF00072 Response regulator receiver domain NRZ29_05960 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_05960 PF00989 PAS fold NRZ29_05960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_05960 PF11808 Phosphate regulon sensor protein PhoR NRZ29_05965 PF12849 PBP superfamily domain NRZ29_05970 PF01435 Peptidase family M48 NRZ29_05980 PF00480 ROK family NRZ29_05985 PF03932 CutC family NRZ29_05995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRZ29_05995 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NRZ29_06000 PF00005 ABC transporter NRZ29_06020 PF00293 NUDIX domain NRZ29_06030 PF08534 Redoxin NRZ29_06035 PF01699 Sodium/calcium exchanger protein NRZ29_06040 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NRZ29_06040 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NRZ29_06045 PF01235 Sodium:alanine symporter family NRZ29_06055 PF00860 Permease family NRZ29_06060 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_06060 PF00072 Response regulator receiver domain NRZ29_06065 PF10692 Protein of unknown function (DUF2498) NRZ29_06070 PF01554 MatE NRZ29_06075 PF12833 Helix-turn-helix domain NRZ29_06080 PF00390 Malic enzyme, N-terminal domain NRZ29_06080 PF03949 Malic enzyme, NAD binding domain NRZ29_06085 PF01389 OmpA-like transmembrane domain NRZ29_06085 PF00691 OmpA family NRZ29_06090 PF00691 OmpA family NRZ29_06090 PF01389 OmpA-like transmembrane domain NRZ29_06095 PF01389 OmpA-like transmembrane domain NRZ29_06095 PF00691 OmpA family NRZ29_06110 PF00209 Sodium:neurotransmitter symporter family NRZ29_06115 PF01734 Patatin-like phospholipase NRZ29_06120 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_06125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ29_06125 PF00529 HlyD membrane-fusion protein of T1SS NRZ29_06130 PF00873 AcrB/AcrD/AcrF family NRZ29_06140 PF04055 Radical SAM superfamily NRZ29_06140 PF11842 Domain of unknown function (DUF3362) NRZ29_06140 PF08497 Radical SAM N-terminal NRZ29_06170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRZ29_06175 PF02075 Crossover junction endodeoxyribonuclease RuvC NRZ29_06180 PF00230 Major intrinsic protein NRZ29_06185 PF01551 Peptidase family M23 NRZ29_06185 PF01464 Transglycosylase SLT domain NRZ29_06185 PF10145 Phage-related minor tail protein NRZ29_06190 PF00128 Alpha amylase, catalytic domain NRZ29_06195 PF01551 Peptidase family M23 NRZ29_06210 PF13091 PLD-like domain NRZ29_06210 PF13396 Phospholipase_D-nuclease N-terminal NRZ29_06220 PF01842 ACT domain NRZ29_06220 PF00551 Formyl transferase NRZ29_06225 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NRZ29_06235 PF00085 Thioredoxin NRZ29_06240 PF01648 4'-phosphopantetheinyl transferase superfamily NRZ29_06245 PF00877 NlpC/P60 family NRZ29_06250 PF05971 RNA methyltransferase NRZ29_06255 PF01575 MaoC like domain NRZ29_06265 PF17969 L,D-transpeptidase C-terminal domain NRZ29_06265 PF01476 LysM domain NRZ29_06265 PF03734 L,D-transpeptidase catalytic domain NRZ29_06280 PF07690 Major Facilitator Superfamily NRZ29_06290 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NRZ29_06295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_06295 PF03466 LysR substrate binding domain NRZ29_06305 PF00893 Small Multidrug Resistance protein NRZ29_06310 PF00893 Small Multidrug Resistance protein NRZ29_06320 PF06130 Phosphate propanoyltransferase NRZ29_06325 PF00936 BMC domain NRZ29_06330 PF13187 4Fe-4S dicluster domain NRZ29_06330 PF04055 Radical SAM superfamily NRZ29_06335 PF01228 Glycine radical NRZ29_06335 PF02901 Pyruvate formate lyase-like NRZ29_06340 PF00171 Aldehyde dehydrogenase family NRZ29_06340 PF00465 Iron-containing alcohol dehydrogenase NRZ29_06350 PF00171 Aldehyde dehydrogenase family NRZ29_06350 PF00465 Iron-containing alcohol dehydrogenase NRZ29_06355 PF00936 BMC domain NRZ29_06360 PF00936 BMC domain NRZ29_06365 PF00936 BMC domain NRZ29_06385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_06385 PF03466 LysR substrate binding domain NRZ29_06390 PF02634 FdhD/NarQ family NRZ29_06395 PF00384 Molybdopterin oxidoreductase NRZ29_06410 PF00440 Bacterial regulatory proteins, tetR family NRZ29_06415 PF09317 Domain of unknown function (DUF1974) NRZ29_06415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRZ29_06415 PF02770 Acyl-CoA dehydrogenase, middle domain NRZ29_06415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRZ29_06420 PF00873 AcrB/AcrD/AcrF family NRZ29_06430 PF00224 Pyruvate kinase, barrel domain NRZ29_06430 PF02887 Pyruvate kinase, alpha/beta domain NRZ29_06435 PF01418 Helix-turn-helix domain, rpiR family NRZ29_06435 PF01380 SIS domain NRZ29_06440 PF02685 Glucokinase NRZ29_06445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_06450 PF00072 Response regulator receiver domain NRZ29_06450 PF00486 Transcriptional regulatory protein, C terminal NRZ29_06455 PF00664 ABC transporter transmembrane region NRZ29_06455 PF00005 ABC transporter NRZ29_06455 PF03412 Peptidase C39 family NRZ29_06465 PF00005 ABC transporter NRZ29_06465 PF03412 Peptidase C39 family NRZ29_06465 PF00664 ABC transporter transmembrane region NRZ29_06475 PF02794 RTX toxin acyltransferase family NRZ29_06480 PF11713 Peptidase C80 family NRZ29_06480 PF07634 RtxA repeat NRZ29_06480 PF11647 Membrane Localization Domain NRZ29_06480 PF16671 Actin cross-linking domain NRZ29_06480 PF12146 Serine aminopeptidase, S33 NRZ29_06490 PF00919 Uncharacterized protein family UPF0004 NRZ29_06490 PF04055 Radical SAM superfamily NRZ29_06490 PF18693 TRAM domain NRZ29_06495 PF00072 Response regulator receiver domain NRZ29_06505 PF02049 Flagellar hook-basal body complex protein FliE NRZ29_06510 PF08345 Flagellar M-ring protein C-terminal NRZ29_06510 PF01514 Secretory protein of YscJ/FliF family NRZ29_06515 PF14842 FliG N-terminal domain NRZ29_06515 PF14841 FliG middle domain NRZ29_06515 PF01706 FliG C-terminal domain NRZ29_06525 PF18269 T3SS EscN ATPase C-terminal domain NRZ29_06525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRZ29_06545 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NRZ29_06545 PF02154 Flagellar motor switch protein FliM NRZ29_06550 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NRZ29_06555 PF04347 Flagellar biosynthesis protein, FliO NRZ29_06560 PF00813 FliP family NRZ29_06565 PF01313 Bacterial export proteins, family 3 NRZ29_06570 PF01311 Bacterial export proteins, family 1 NRZ29_06575 PF01312 FlhB HrpN YscU SpaS Family NRZ29_06580 PF00771 FHIPEP family NRZ29_06585 PF00448 SRP54-type protein, GTPase domain NRZ29_06590 PF10609 NUBPL iron-transfer P-loop NTPase NRZ29_06595 PF04542 Sigma-70 region 2 NRZ29_06595 PF04539 Sigma-70 region 3 NRZ29_06595 PF04545 Sigma-70, region 4 NRZ29_06600 PF00072 Response regulator receiver domain NRZ29_06605 PF04344 Chemotaxis phosphatase, CheZ NRZ29_06610 PF00072 Response regulator receiver domain NRZ29_06610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_06610 PF02895 Signal transducing histidine kinase, homodimeric domain NRZ29_06610 PF01584 CheW-like domain NRZ29_06610 PF01627 Hpt domain NRZ29_06615 PF01339 CheB methylesterase NRZ29_06615 PF00072 Response regulator receiver domain NRZ29_06620 PF01618 MotA/TolQ/ExbB proton channel family NRZ29_06625 PF13677 Membrane MotB of proton-channel complex MotA/MotB NRZ29_06625 PF00691 OmpA family NRZ29_06630 PF13614 AAA domain NRZ29_06640 PF01584 CheW-like domain NRZ29_06650 PF00005 ABC transporter NRZ29_06655 PF03379 CcmB protein NRZ29_06660 PF01578 Cytochrome C assembly protein NRZ29_06665 PF04995 Heme exporter protein D (CcmD) NRZ29_06670 PF03100 CcmE NRZ29_06675 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NRZ29_06675 PF01578 Cytochrome C assembly protein NRZ29_06680 PF08534 Redoxin NRZ29_06685 PF03918 Cytochrome C biogenesis protein NRZ29_06690 PF03918 Cytochrome C biogenesis protein NRZ29_06695 PF04333 MlaA lipoprotein NRZ29_06700 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NRZ29_06700 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NRZ29_06705 PF00462 Glutaredoxin NRZ29_06710 PF01189 16S rRNA methyltransferase RsmB/F NRZ29_06710 PF01029 NusB family NRZ29_06725 PF01243 Pyridoxamine 5'-phosphate oxidase NRZ29_06725 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NRZ29_06730 PF02798 Glutathione S-transferase, N-terminal domain NRZ29_06740 PF13508 Acetyltransferase (GNAT) domain NRZ29_06745 PF08007 Cupin superfamily protein NRZ29_06755 PF00206 Lyase NRZ29_06755 PF08328 Adenylosuccinate lyase C-terminal NRZ29_06760 PF04356 Protein of unknown function (DUF489) NRZ29_06770 PF00293 NUDIX domain NRZ29_06775 PF00849 RNA pseudouridylate synthase NRZ29_06785 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRZ29_06790 PF07690 Major Facilitator Superfamily NRZ29_06795 PF02378 Phosphotransferase system, EIIC NRZ29_06795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRZ29_06795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRZ29_06815 PF00583 Acetyltransferase (GNAT) family NRZ29_06825 PF00356 Bacterial regulatory proteins, lacI family NRZ29_06825 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRZ29_06830 PF00367 phosphotransferase system, EIIB NRZ29_06830 PF02378 Phosphotransferase system, EIIC NRZ29_06835 PF00155 Aminotransferase class I and II NRZ29_06865 PF01238 Phosphomannose isomerase type I NRZ29_06870 PF12833 Helix-turn-helix domain NRZ29_06875 PF00180 Isocitrate/isopropylmalate dehydrogenase NRZ29_06885 PF00291 Pyridoxal-phosphate dependent enzyme NRZ29_06890 PF02447 GntP family permease NRZ29_06895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_06895 PF03466 LysR substrate binding domain NRZ29_06915 PF01668 SmpB protein NRZ29_06920 PF03364 Polyketide cyclase / dehydrase and lipid transport NRZ29_06925 PF03658 RnfH family Ubiquitin NRZ29_06930 PF13460 NAD(P)H-binding NRZ29_06935 PF04355 SmpA / OmlA family NRZ29_06965 PF00263 Bacterial type II and III secretion system protein NRZ29_06965 PF04972 BON domain NRZ29_06965 PF13629 Pilus formation protein N terminal region NRZ29_06980 PF00437 Type II/IV secretion system protein NRZ29_07015 PF00465 Iron-containing alcohol dehydrogenase NRZ29_07020 PF01048 Phosphorylase superfamily NRZ29_07025 PF00849 RNA pseudouridylate synthase NRZ29_07030 PF01156 Inosine-uridine preferring nucleoside hydrolase NRZ29_07045 PF07509 Protein of unknown function (DUF1523) NRZ29_07050 PF00672 HAMP domain NRZ29_07050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_07055 PF01810 LysE type translocator NRZ29_07065 PF02080 TrkA-C domain NRZ29_07065 PF03471 Transporter associated domain NRZ29_07065 PF00999 Sodium/hydrogen exchanger family NRZ29_07075 PF02080 TrkA-C domain NRZ29_07075 PF03471 Transporter associated domain NRZ29_07075 PF00999 Sodium/hydrogen exchanger family NRZ29_07085 PF02557 D-alanyl-D-alanine carboxypeptidase NRZ29_07090 PF07687 Peptidase dimerisation domain NRZ29_07090 PF01546 Peptidase family M20/M25/M40 NRZ29_07095 PF03960 ArsC family NRZ29_07100 PF03466 LysR substrate binding domain NRZ29_07100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_07110 PF03606 C4-dicarboxylate anaerobic carrier NRZ29_07115 PF07687 Peptidase dimerisation domain NRZ29_07115 PF01546 Peptidase family M20/M25/M40 NRZ29_07125 PF03605 Anaerobic c4-dicarboxylate membrane transporter NRZ29_07130 PF00152 tRNA synthetases class II (D, K and N) NRZ29_07130 PF01336 OB-fold nucleic acid binding domain NRZ29_07145 PF00202 Aminotransferase class-III NRZ29_07150 PF06968 Biotin and Thiamin Synthesis associated domain NRZ29_07150 PF04055 Radical SAM superfamily NRZ29_07155 PF00155 Aminotransferase class I and II NRZ29_07160 PF12697 Alpha/beta hydrolase family NRZ29_07160 PF08241 Methyltransferase domain NRZ29_07170 PF01435 Peptidase family M48 NRZ29_07175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_07175 PF08447 PAS fold NRZ29_07175 PF13426 PAS domain NRZ29_07180 PF03476 MOSC N-terminal beta barrel domain NRZ29_07180 PF03473 MOSC domain NRZ29_07180 PF00111 2Fe-2S iron-sulfur cluster binding domain NRZ29_07180 PF03473 MOSC domain NRZ29_07180 PF00111 2Fe-2S iron-sulfur cluster binding domain NRZ29_07180 PF03476 MOSC N-terminal beta barrel domain NRZ29_07185 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NRZ29_07185 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NRZ29_07185 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ29_07190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRZ29_07190 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NRZ29_07190 PF10371 Domain of unknown function NRZ29_07190 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NRZ29_07190 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NRZ29_07195 PF01804 Penicillin amidase NRZ29_07215 PF01554 MatE NRZ29_07235 PF00291 Pyridoxal-phosphate dependent enzyme NRZ29_07245 PF00465 Iron-containing alcohol dehydrogenase NRZ29_07255 PF08359 YsiA-like protein, C-terminal region NRZ29_07255 PF00440 Bacterial regulatory proteins, tetR family NRZ29_07260 PF00171 Aldehyde dehydrogenase family NRZ29_07270 PF00877 NlpC/P60 family NRZ29_07275 PF12563 Hemolytic toxin N terminal NRZ29_07275 PF07968 Leukocidin/Hemolysin toxin family NRZ29_07280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_07280 PF03466 LysR substrate binding domain NRZ29_07285 PF10417 C-terminal domain of 1-Cys peroxiredoxin NRZ29_07285 PF00578 AhpC/TSA family NRZ29_07305 PF08003 Protein of unknown function (DUF1698) NRZ29_07310 PF13649 Methyltransferase domain NRZ29_07315 PF01904 Protein of unknown function DUF72 NRZ29_07320 PF02938 GAD domain NRZ29_07320 PF00152 tRNA synthetases class II (D, K and N) NRZ29_07320 PF01336 OB-fold nucleic acid binding domain NRZ29_07325 PF01709 Transcriptional regulator NRZ29_07330 PF08019 Phosphoethanolamine transferase EptA/EptB NRZ29_07330 PF00884 Sulfatase NRZ29_07340 PF02397 Bacterial sugar transferase NRZ29_07345 PF01943 Polysaccharide biosynthesis protein NRZ29_07355 PF00535 Glycosyl transferase family 2 NRZ29_07360 PF13439 Glycosyltransferase Family 4 NRZ29_07360 PF00534 Glycosyl transferases group 1 NRZ29_07375 PF00535 Glycosyl transferase family 2 NRZ29_07380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NRZ29_07380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NRZ29_07380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NRZ29_07385 PF02563 Polysaccharide biosynthesis/export protein NRZ29_07385 PF10531 SLBB domain NRZ29_07385 PF18412 Outer-membrane lipoprotein Wza C-terminal domain NRZ29_07390 PF01451 Low molecular weight phosphotyrosine protein phosphatase NRZ29_07395 PF02706 Chain length determinant protein NRZ29_07395 PF13614 AAA domain NRZ29_07395 PF13807 G-rich domain on putative tyrosine kinase NRZ29_07405 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF NRZ29_07410 PF06251 Capsule biosynthesis GfcC NRZ29_07415 PF06082 Exopolysaccharide biosynthesis protein YbjH NRZ29_07425 PF04337 Protein of unknown function, DUF480 NRZ29_07430 PF00271 Helicase conserved C-terminal domain NRZ29_07430 PF00176 SNF2 family N-terminal domain NRZ29_07430 PF04434 SWIM zinc finger NRZ29_07435 PF05472 DNA replication terminus site-binding protein (Ter protein) NRZ29_07445 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NRZ29_07450 PF00676 Dehydrogenase E1 component NRZ29_07455 PF02779 Transketolase, pyrimidine binding domain NRZ29_07455 PF02780 Transketolase, C-terminal domain NRZ29_07460 PF00364 Biotin-requiring enzyme NRZ29_07460 PF02817 e3 binding domain NRZ29_07460 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NRZ29_07465 PF00313 'Cold-shock' DNA-binding domain NRZ29_07490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ29_07495 PF00892 EamA-like transporter family NRZ29_07500 PF00455 DeoR C terminal sensor domain NRZ29_07500 PF08220 DeoR-like helix-turn-helix domain NRZ29_07505 PF01228 Glycine radical NRZ29_07505 PF02901 Pyruvate formate lyase-like NRZ29_07510 PF04055 Radical SAM superfamily NRZ29_07515 PF00923 Transaldolase/Fructose-6-phosphate aldolase NRZ29_07525 PF11871 Domain of unknown function (DUF3391) NRZ29_07525 PF01966 HD domain NRZ29_07530 PF01479 S4 domain NRZ29_07530 PF00849 RNA pseudouridylate synthase NRZ29_07540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ29_07545 PF12850 Calcineurin-like phosphoesterase superfamily domain NRZ29_07560 PF13144 Chaperone for flagella basal body P-ring formation NRZ29_07565 PF01584 CheW-like domain NRZ29_07565 PF00072 Response regulator receiver domain NRZ29_07570 PF03705 CheR methyltransferase, all-alpha domain NRZ29_07570 PF01739 CheR methyltransferase, SAM binding domain NRZ29_07575 PF00460 Flagella basal body rod protein NRZ29_07580 PF00460 Flagella basal body rod protein NRZ29_07580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRZ29_07590 PF00460 Flagella basal body rod protein NRZ29_07590 PF07559 Flagellar basal body protein FlaE NRZ29_07590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRZ29_07595 PF00460 Flagella basal body rod protein NRZ29_07595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRZ29_07600 PF00460 Flagella basal body rod protein NRZ29_07600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRZ29_07605 PF02107 Flagellar L-ring protein NRZ29_07610 PF02119 Flagellar P-ring protein NRZ29_07615 PF10135 Rod binding protein NRZ29_07615 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NRZ29_07620 PF00460 Flagella basal body rod protein NRZ29_07620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NRZ29_07625 PF00669 Bacterial flagellin N-terminal helical region NRZ29_07630 PF00571 CBS domain NRZ29_07630 PF01769 Divalent cation transporter NRZ29_07630 PF03448 MgtE intracellular N domain NRZ29_07635 PF02541 Ppx/GppA phosphatase family NRZ29_07640 PF13090 Polyphosphate kinase C-terminal domain 2 NRZ29_07640 PF13089 Polyphosphate kinase N-terminal domain NRZ29_07640 PF17941 Polyphosphate kinase C-terminal domain 1 NRZ29_07640 PF02503 Polyphosphate kinase middle domain NRZ29_07645 PF01842 ACT domain NRZ29_07655 PF06490 Flagellar regulatory protein FleQ NRZ29_07655 PF02954 Bacterial regulatory protein, Fis family NRZ29_07655 PF00158 Sigma-54 interaction domain NRZ29_07660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_07660 PF13188 PAS domain NRZ29_07660 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_07665 PF00072 Response regulator receiver domain NRZ29_07665 PF02954 Bacterial regulatory protein, Fis family NRZ29_07665 PF00158 Sigma-54 interaction domain NRZ29_07670 PF01784 NIF3 (NGG1p interacting factor 3) NRZ29_07675 PF00551 Formyl transferase NRZ29_07680 PF00586 AIR synthase related protein, N-terminal domain NRZ29_07680 PF02769 AIR synthase related protein, C-terminal domain NRZ29_07695 PF00308 Bacterial dnaA protein NRZ29_07700 PF00463 Isocitrate lyase family NRZ29_07705 PF01274 Malate synthase NRZ29_07720 PF14437 MafB19-like deaminase NRZ29_07725 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_07730 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_07735 PF00005 ABC transporter NRZ29_07740 PF01895 PhoU domain NRZ29_07745 PF03471 Transporter associated domain NRZ29_07745 PF00571 CBS domain NRZ29_07745 PF01595 Cyclin M transmembrane N-terminal domain NRZ29_07760 PF13520 Amino acid permease NRZ29_07765 PF04116 Fatty acid hydroxylase superfamily NRZ29_07780 PF00005 ABC transporter NRZ29_07785 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_07790 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ29_07795 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_07800 PF07690 Major Facilitator Superfamily NRZ29_07805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_07805 PF07730 Histidine kinase NRZ29_07805 PF05231 MASE1 NRZ29_07810 PF00072 Response regulator receiver domain NRZ29_07810 PF00196 Bacterial regulatory proteins, luxR family NRZ29_07815 PF01272 Transcription elongation factor, GreA/GreB, C-term NRZ29_07815 PF14760 Rnk N-terminus NRZ29_07830 PF00245 Alkaline phosphatase NRZ29_07835 PF00245 Alkaline phosphatase NRZ29_07840 PF01926 50S ribosome-binding GTPase NRZ29_07845 PF07690 Major Facilitator Superfamily NRZ29_07850 PF00850 Histone deacetylase domain NRZ29_07860 PF13307 Helicase C-terminal domain NRZ29_07860 PF06733 DEAD_2 NRZ29_07865 PF13609 Gram-negative porin NRZ29_07875 PF00155 Aminotransferase class I and II NRZ29_07880 PF05872 Bacterial protein of unknown function (DUF853) NRZ29_07895 PF00753 Metallo-beta-lactamase superfamily NRZ29_07895 PF03772 Competence protein NRZ29_07900 PF00005 ABC transporter NRZ29_07900 PF00664 ABC transporter transmembrane region NRZ29_07905 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NRZ29_07910 PF03966 Trm112p-like protein NRZ29_07915 PF02348 Cytidylyltransferase NRZ29_07920 PF00072 Response regulator receiver domain NRZ29_07920 PF00196 Bacterial regulatory proteins, luxR family NRZ29_07925 PF01541 GIY-YIG catalytic domain NRZ29_07925 PF08459 UvrC Helix-hairpin-helix N-terminal NRZ29_07925 PF02151 UvrB/uvrC motif NRZ29_07930 PF01066 CDP-alcohol phosphatidyltransferase NRZ29_07980 PF17482 Phage tail sheath C-terminal domain NRZ29_07980 PF04984 Phage tail sheath protein subtilisin-like domain NRZ29_08030 PF10549 ORF11CD3 domain NRZ29_08030 PF09669 Phage regulatory protein Rha (Phage_pRha) NRZ29_08140 PF00717 Peptidase S24-like NRZ29_08145 PF11798 IMS family HHH motif NRZ29_08145 PF13438 Domain of unknown function (DUF4113) NRZ29_08145 PF00817 impB/mucB/samB family NRZ29_08145 PF11799 impB/mucB/samB family C-terminal domain NRZ29_08220 PF00717 Peptidase S24-like NRZ29_08220 PF01381 Helix-turn-helix NRZ29_08240 PF00589 Phage integrase family NRZ29_08240 PF02899 Phage integrase, N-terminal SAM-like domain NRZ29_08265 PF13426 PAS domain NRZ29_08265 PF08447 PAS fold NRZ29_08265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_08270 PF00672 HAMP domain NRZ29_08270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_08275 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB NRZ29_08280 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) NRZ29_08300 PF00037 4Fe-4S binding domain NRZ29_08300 PF13247 4Fe-4S dicluster domain NRZ29_08305 PF03916 Polysulphide reductase, NrfD NRZ29_08310 PF00149 Calcineurin-like phosphoesterase NRZ29_08320 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NRZ29_08325 PF09190 DALR domain NRZ29_08325 PF01406 tRNA synthetases class I (C) catalytic domain NRZ29_08345 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_08345 PF13185 GAF domain NRZ29_08375 PF01169 Uncharacterized protein family UPF0016 NRZ29_08380 PF01253 Translation initiation factor SUI1 NRZ29_08390 PF07664 Ferrous iron transport protein B C terminus NRZ29_08390 PF07670 Nucleoside recognition NRZ29_08390 PF02421 Ferrous iron transport protein B NRZ29_08405 PF00483 Nucleotidyl transferase NRZ29_08410 PF00437 Type II/IV secretion system protein NRZ29_08420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_08420 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_08420 PF01627 Hpt domain NRZ29_08420 PF00989 PAS fold NRZ29_08420 PF00072 Response regulator receiver domain NRZ29_08420 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ29_08425 PF01032 FecCD transport family NRZ29_08430 PF00005 ABC transporter NRZ29_08435 PF00583 Acetyltransferase (GNAT) family NRZ29_08440 PF00793 DAHP synthetase I family NRZ29_08445 PF01219 Prokaryotic diacylglycerol kinase NRZ29_08450 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRZ29_08450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRZ29_08450 PF01842 ACT domain NRZ29_08455 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NRZ29_08460 PF01812 5-formyltetrahydrofolate cyclo-ligase family NRZ29_08470 PF05173 Dihydrodipicolinate reductase, C-terminus NRZ29_08470 PF01113 Dihydrodipicolinate reductase, N-terminus NRZ29_08475 PF00117 Glutamine amidotransferase class-I NRZ29_08475 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NRZ29_08480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NRZ29_08480 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NRZ29_08480 PF02142 MGS-like domain NRZ29_08485 PF00682 HMGL-like NRZ29_08485 PF08502 LeuA allosteric (dimerisation) domain NRZ29_08490 PF07759 Protein of unknown function (DUF1615) NRZ29_08500 PF08378 Nuclease-related domain NRZ29_08525 PF13302 Acetyltransferase (GNAT) domain NRZ29_08530 PF00270 DEAD/DEAH box helicase NRZ29_08530 PF00271 Helicase conserved C-terminal domain NRZ29_08540 PF14521 Lysine-specific metallo-endopeptidase NRZ29_08555 PF00376 MerR family regulatory protein NRZ29_08555 PF09278 MerR, DNA binding NRZ29_08570 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ29_08575 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_08580 PF00005 ABC transporter NRZ29_08585 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ29_08585 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NRZ29_08590 PF00310 Glutamine amidotransferases class-II NRZ29_08590 PF04898 Glutamate synthase central domain NRZ29_08590 PF01645 Conserved region in glutamate synthase NRZ29_08590 PF01493 GXGXG motif NRZ29_08595 PF04055 Radical SAM superfamily NRZ29_08595 PF16199 Radical_SAM C-terminal domain NRZ29_08600 PF00664 ABC transporter transmembrane region NRZ29_08600 PF00005 ABC transporter NRZ29_08600 PF03412 Peptidase C39 family NRZ29_08645 PF00324 Amino acid permease NRZ29_08655 PF03618 Kinase/pyrophosphorylase NRZ29_08660 PF02896 PEP-utilising enzyme, TIM barrel domain NRZ29_08660 PF00391 PEP-utilising enzyme, mobile domain NRZ29_08660 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NRZ29_08670 PF00933 Glycosyl hydrolase family 3 N terminal domain NRZ29_08670 PF01915 Glycosyl hydrolase family 3 C-terminal domain NRZ29_08670 PF14310 Fibronectin type III-like domain NRZ29_08680 PF00082 Subtilase family NRZ29_08680 PF01483 Proprotein convertase P-domain NRZ29_08690 PF03180 NLPA lipoprotein NRZ29_08695 PF01569 PAP2 superfamily NRZ29_08700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRZ29_08700 PF11890 Domain of unknown function (DUF3410) NRZ29_08700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRZ29_08705 PF01118 Semialdehyde dehydrogenase, NAD binding domain NRZ29_08705 PF02774 Semialdehyde dehydrogenase, dimerisation domain NRZ29_08715 PF01416 tRNA pseudouridine synthase NRZ29_08720 PF01039 Carboxyl transferase domain NRZ29_08720 PF17848 Acetyl-coA carboxylase zinc finger domain NRZ29_08725 PF02875 Mur ligase family, glutamate ligase domain NRZ29_08725 PF08245 Mur ligase middle domain NRZ29_08730 PF05036 Sporulation related domain NRZ29_08735 PF04358 DsrC like protein NRZ29_08740 PF12805 FUSC-like inner membrane protein yccS NRZ29_08745 PF01027 Inhibitor of apoptosis-promoting Bax1 NRZ29_08760 PF00884 Sulfatase NRZ29_08760 PF08019 Phosphoethanolamine transferase EptA/EptB NRZ29_08765 PF03706 Lysylphosphatidylglycerol synthase TM region NRZ29_08765 PF09924 Uncharacterised conserved protein (DUF2156) NRZ29_08775 PF08447 PAS fold NRZ29_08775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_08780 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_08780 PF00563 EAL domain NRZ29_08780 PF13426 PAS domain NRZ29_08785 PF00849 RNA pseudouridylate synthase NRZ29_08795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRZ29_08800 PF04209 homogentisate 1,2-dioxygenase NRZ29_08810 PF02798 Glutathione S-transferase, N-terminal domain NRZ29_08810 PF14497 Glutathione S-transferase, C-terminal domain NRZ29_08820 PF13537 Glutamine amidotransferase domain NRZ29_08820 PF00733 Asparagine synthase NRZ29_08830 PF02254 TrkA-N domain NRZ29_08830 PF00999 Sodium/hydrogen exchanger family NRZ29_08835 PF13344 Haloacid dehalogenase-like hydrolase NRZ29_08840 PF00962 Adenosine/AMP deaminase NRZ29_08845 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NRZ29_08850 PF03741 Integral membrane protein TerC family NRZ29_08850 PF03471 Transporter associated domain NRZ29_08860 PF01565 FAD binding domain NRZ29_08860 PF02913 FAD linked oxidases, C-terminal domain NRZ29_08860 PF13183 4Fe-4S dicluster domain NRZ29_08870 PF03061 Thioesterase superfamily NRZ29_08875 PF03880 DbpA RNA binding domain NRZ29_08875 PF00270 DEAD/DEAH box helicase NRZ29_08875 PF00271 Helicase conserved C-terminal domain NRZ29_08880 PF03553 Na+/H+ antiporter family NRZ29_08880 PF13726 Na+-H+ antiporter family NRZ29_08885 PF00929 Exonuclease NRZ29_08890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_08890 PF00672 HAMP domain NRZ29_08890 PF12729 Four helix bundle sensory module for signal transduction NRZ29_08895 PF00691 OmpA family NRZ29_08895 PF18393 MotY N-terminal domain NRZ29_08900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRZ29_08905 PF00730 HhH-GPD superfamily base excision DNA repair protein NRZ29_08905 PF00633 Helix-hairpin-helix motif NRZ29_08905 PF10576 Iron-sulfur binding domain of endonuclease III NRZ29_08910 PF02508 Rnf-Nqr subunit, membrane protein NRZ29_08915 PF04205 FMN-binding domain NRZ29_08920 PF03116 NQR2, RnfD, RnfE family NRZ29_08925 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NRZ29_08925 PF12838 4Fe-4S dicluster domain NRZ29_08925 PF13375 RnfC Barrel sandwich hybrid domain NRZ29_08925 PF10531 SLBB domain NRZ29_08930 PF04060 Putative Fe-S cluster NRZ29_08935 PF02508 Rnf-Nqr subunit, membrane protein NRZ29_08940 PF00892 EamA-like transporter family NRZ29_08960 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NRZ29_08960 PF12241 Trans-2-enoyl-CoA reductase catalytic region NRZ29_08960 PF07055 Enoyl reductase FAD binding domain NRZ29_08965 PF03606 C4-dicarboxylate anaerobic carrier NRZ29_08970 PF00155 Aminotransferase class I and II NRZ29_08980 PF00462 Glutaredoxin NRZ29_08985 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NRZ29_08990 PF00271 Helicase conserved C-terminal domain NRZ29_08990 PF04851 Type III restriction enzyme, res subunit NRZ29_08995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ29_08995 PF00529 HlyD membrane-fusion protein of T1SS NRZ29_09000 PF11742 Protein of unknown function (DUF3302) NRZ29_09005 PF02554 Carbon starvation protein CstA NRZ29_09010 PF04397 LytTr DNA-binding domain NRZ29_09010 PF00072 Response regulator receiver domain NRZ29_09015 PF06580 Histidine kinase NRZ29_09015 PF07694 5TMR of 5TMR-LYT NRZ29_09020 PF01966 HD domain NRZ29_09025 PF00171 Aldehyde dehydrogenase family NRZ29_09025 PF00465 Iron-containing alcohol dehydrogenase NRZ29_09035 PF01914 MarC family integral membrane protein NRZ29_09040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ29_09045 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_09050 PF12911 N-terminal TM domain of oligopeptide transport permease C NRZ29_09050 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_09055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRZ29_09055 PF00005 ABC transporter NRZ29_09060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRZ29_09060 PF00005 ABC transporter NRZ29_09065 PF03741 Integral membrane protein TerC family NRZ29_09070 PF00842 Alanine racemase, C-terminal domain NRZ29_09070 PF01168 Alanine racemase, N-terminal domain NRZ29_09080 PF00375 Sodium:dicarboxylate symporter family NRZ29_09095 PF01979 Amidohydrolase family NRZ29_09105 PF00672 HAMP domain NRZ29_09105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_09110 PF01230 HIT domain NRZ29_09145 PF07549 SecD/SecF GG Motif NRZ29_09145 PF13721 SecD export protein N-terminal TM region NRZ29_09145 PF02355 Protein export membrane protein NRZ29_09150 PF07549 SecD/SecF GG Motif NRZ29_09150 PF02355 Protein export membrane protein NRZ29_09160 PF05661 Protein of unknown function (DUF808) NRZ29_09165 PF08439 Oligopeptidase F NRZ29_09165 PF01432 Peptidase family M3 NRZ29_09170 PF01432 Peptidase family M3 NRZ29_09170 PF08439 Oligopeptidase F NRZ29_09175 PF00860 Permease family NRZ29_09180 PF05728 Uncharacterised protein family (UPF0227) NRZ29_09185 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ29_09205 PF01906 Putative heavy-metal-binding NRZ29_09215 PF01734 Patatin-like phospholipase NRZ29_09220 PF02016 LD-carboxypeptidase N-terminal domain NRZ29_09220 PF17676 LD-carboxypeptidase C-terminal domain NRZ29_09225 PF00884 Sulfatase NRZ29_09235 PF00696 Amino acid kinase family NRZ29_09235 PF01842 ACT domain NRZ29_09240 PF00696 Amino acid kinase family NRZ29_09240 PF00583 Acetyltransferase (GNAT) family NRZ29_09245 PF01625 Peptide methionine sulfoxide reductase NRZ29_09265 PF00561 alpha/beta hydrolase fold NRZ29_09270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRZ29_09280 PF03466 LysR substrate binding domain NRZ29_09280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_09285 PF02652 L-lactate permease NRZ29_09290 PF02754 Cysteine-rich domain NRZ29_09295 PF02589 LUD domain NRZ29_09295 PF13183 4Fe-4S dicluster domain NRZ29_09295 PF11870 Domain of unknown function (DUF3390) NRZ29_09300 PF02589 LUD domain NRZ29_09305 PF01565 FAD binding domain NRZ29_09305 PF02913 FAD linked oxidases, C-terminal domain NRZ29_09330 PF12704 MacB-like periplasmic core domain NRZ29_09330 PF02687 FtsX-like permease family NRZ29_09335 PF00005 ABC transporter NRZ29_09345 PF07690 Major Facilitator Superfamily NRZ29_09360 PF01593 Flavin containing amine oxidoreductase NRZ29_09365 PF03239 Iron permease FTR1 family NRZ29_09395 PF01740 STAS domain NRZ29_09395 PF00916 Sulfate permease family NRZ29_09415 PF12729 Four helix bundle sensory module for signal transduction NRZ29_09415 PF00672 HAMP domain NRZ29_09415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_09420 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_09420 PF00563 EAL domain NRZ29_09420 PF03707 Bacterial signalling protein N terminal repeat NRZ29_09425 PF01339 CheB methylesterase NRZ29_09425 PF00072 Response regulator receiver domain NRZ29_09430 PF03705 CheR methyltransferase, all-alpha domain NRZ29_09430 PF01739 CheR methyltransferase, SAM binding domain NRZ29_09435 PF01584 CheW-like domain NRZ29_09440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_09440 PF17202 Single cache domain 3 NRZ29_09440 PF00672 HAMP domain NRZ29_09445 PF02895 Signal transducing histidine kinase, homodimeric domain NRZ29_09445 PF09078 CheY binding NRZ29_09445 PF01584 CheW-like domain NRZ29_09445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_09445 PF01627 Hpt domain NRZ29_09455 PF00072 Response regulator receiver domain NRZ29_09460 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal NRZ29_09460 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NRZ29_09465 PF13247 4Fe-4S dicluster domain NRZ29_09470 PF03916 Polysulphide reductase, NrfD NRZ29_09475 PF00374 Nickel-dependent hydrogenase NRZ29_09480 PF01750 Hydrogenase maturation protease NRZ29_09485 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE NRZ29_09490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ29_09495 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_09500 PF12911 N-terminal TM domain of oligopeptide transport permease C NRZ29_09500 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_09505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRZ29_09505 PF00005 ABC transporter NRZ29_09510 PF00005 ABC transporter NRZ29_09515 PF02492 CobW/HypB/UreG, nucleotide-binding domain NRZ29_09525 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA NRZ29_09530 PF02769 AIR synthase related protein, C-terminal domain NRZ29_09530 PF00586 AIR synthase related protein, N-terminal domain NRZ29_09535 PF01924 Hydrogenase formation hypA family NRZ29_09540 PF01455 HupF/HypC family NRZ29_09545 PF07503 HypF finger NRZ29_09545 PF01300 Telomere recombination NRZ29_09545 PF00708 Acylphosphatase NRZ29_09545 PF17788 HypF Kae1-like domain NRZ29_09550 PF03144 Elongation factor Tu domain 2 NRZ29_09550 PF00009 Elongation factor Tu GTP binding domain NRZ29_09550 PF09105 Elongation factor SelB, winged helix NRZ29_09550 PF09106 Elongation factor SelB, winged helix NRZ29_09550 PF09107 Elongation factor SelB, winged helix NRZ29_09555 PF03841 L-seryl-tRNA selenium transferase NRZ29_09555 PF12390 Selenocysteine synthase N terminal NRZ29_09565 PF01750 Hydrogenase maturation protease NRZ29_09570 PF07450 Formate hydrogenlyase maturation protein HycH NRZ29_09575 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NRZ29_09580 PF12838 4Fe-4S dicluster domain NRZ29_09585 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NRZ29_09585 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NRZ29_09585 PF00374 Nickel-dependent hydrogenase NRZ29_09590 PF00146 NADH dehydrogenase NRZ29_09595 PF00361 Proton-conducting membrane transporter NRZ29_09600 PF12798 4Fe-4S binding domain NRZ29_09600 PF00037 4Fe-4S binding domain NRZ29_09605 PF00202 Aminotransferase class-III NRZ29_09610 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NRZ29_09610 PF08240 Alcohol dehydrogenase GroES-like domain NRZ29_09615 PF13419 Haloacid dehalogenase-like hydrolase NRZ29_09620 PF07690 Major Facilitator Superfamily NRZ29_09630 PF02705 K+ potassium transporter NRZ29_09635 PF13286 Phosphohydrolase-associated domain NRZ29_09635 PF01966 HD domain NRZ29_09650 PF12800 4Fe-4S binding domain NRZ29_09650 PF13247 4Fe-4S dicluster domain NRZ29_09665 PF00158 Sigma-54 interaction domain NRZ29_09665 PF01590 GAF domain NRZ29_09665 PF02954 Bacterial regulatory protein, Fis family NRZ29_09670 PF02634 FdhD/NarQ family NRZ29_09675 PF02132 RecR protein NRZ29_09675 PF13662 Toprim domain NRZ29_09680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_09680 PF00183 Hsp90 protein NRZ29_09685 PF05191 Adenylate kinase, active site lid NRZ29_09690 PF00762 Ferrochelatase NRZ29_09695 PF01124 MAPEG family NRZ29_09700 PF00294 pfkB family carbohydrate kinase NRZ29_09715 PF00563 EAL domain NRZ29_09715 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_09715 PF03707 Bacterial signalling protein N terminal repeat NRZ29_09720 PF00483 Nucleotidyl transferase NRZ29_09730 PF07273 Protein of unknown function (DUF1439) NRZ29_09735 PF00425 chorismate binding enzyme NRZ29_09740 PF00501 AMP-binding enzyme NRZ29_09740 PF13193 AMP-binding enzyme C-terminal domain NRZ29_09745 PF00550 Phosphopantetheine attachment site NRZ29_09745 PF00857 Isochorismatase family NRZ29_09750 PF13193 AMP-binding enzyme C-terminal domain NRZ29_09750 PF00668 Condensation domain NRZ29_09750 PF00550 Phosphopantetheine attachment site NRZ29_09750 PF00975 Thioesterase domain NRZ29_09750 PF00501 AMP-binding enzyme NRZ29_09760 PF00501 AMP-binding enzyme NRZ29_09760 PF13193 AMP-binding enzyme C-terminal domain NRZ29_09760 PF00668 Condensation domain NRZ29_09760 PF07993 Male sterility protein NRZ29_09760 PF00550 Phosphopantetheine attachment site NRZ29_09765 PF02801 Beta-ketoacyl synthase, C-terminal domain NRZ29_09765 PF14765 Polyketide synthase dehydratase NRZ29_09765 PF00550 Phosphopantetheine attachment site NRZ29_09765 PF00109 Beta-ketoacyl synthase, N-terminal domain NRZ29_09765 PF16197 Ketoacyl-synthetase C-terminal extension NRZ29_09765 PF00668 Condensation domain NRZ29_09765 PF08659 KR domain NRZ29_09765 PF00501 AMP-binding enzyme NRZ29_09765 PF13193 AMP-binding enzyme C-terminal domain NRZ29_09770 PF00768 D-alanyl-D-alanine carboxypeptidase NRZ29_09775 PF00293 NUDIX domain NRZ29_09780 PF03918 Cytochrome C biogenesis protein NRZ29_09785 PF08534 Redoxin NRZ29_09790 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NRZ29_09790 PF01578 Cytochrome C assembly protein NRZ29_09795 PF03916 Polysulphide reductase, NrfD NRZ29_09800 PF13247 4Fe-4S dicluster domain NRZ29_09800 PF00037 4Fe-4S binding domain NRZ29_09805 PF13435 Cytochrome c554 and c-prime NRZ29_09805 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) NRZ29_09810 PF02335 Cytochrome c552 NRZ29_09815 PF13183 4Fe-4S dicluster domain NRZ29_09815 PF02754 Cysteine-rich domain NRZ29_09820 PF00890 FAD binding domain NRZ29_09825 PF04324 BFD-like [2Fe-2S] binding domain NRZ29_09825 PF01266 FAD dependent oxidoreductase NRZ29_09830 PF02810 SEC-C motif NRZ29_09835 PF17200 Single Cache domain 2 NRZ29_09835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_09835 PF00672 HAMP domain NRZ29_09840 PF00480 ROK family NRZ29_09840 PF01047 MarR family NRZ29_09845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_09845 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NRZ29_09845 PF17203 Single cache domain 3 NRZ29_09845 PF00989 PAS fold NRZ29_09850 PF12431 Transcriptional regulator NRZ29_09850 PF08279 HTH domain NRZ29_09850 PF00072 Response regulator receiver domain NRZ29_09855 PF01970 Tripartite tricarboxylate transporter TctA family NRZ29_09870 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ29_09870 PF01464 Transglycosylase SLT domain NRZ29_09875 PF06826 Predicted Permease Membrane Region NRZ29_09875 PF02080 TrkA-C domain NRZ29_09885 PF17757 UvrB interaction domain NRZ29_09885 PF12344 Ultra-violet resistance protein B NRZ29_09885 PF02151 UvrB/uvrC motif NRZ29_09885 PF04851 Type III restriction enzyme, res subunit NRZ29_09885 PF00271 Helicase conserved C-terminal domain NRZ29_09895 PF09335 SNARE associated Golgi protein NRZ29_09900 PF02600 Disulfide bond formation protein DsbB NRZ29_09905 PF06450 Bacterial Na+/H+ antiporter B (NhaB) NRZ29_09910 PF07840 FadR C-terminal domain NRZ29_09910 PF00392 Bacterial regulatory proteins, gntR family NRZ29_09915 PF04293 SpoVR like protein NRZ29_09920 PF04285 Protein of unknown function (DUF444) NRZ29_09925 PF06798 PrkA serine protein kinase C-terminal domain NRZ29_09925 PF08298 PrkA AAA domain NRZ29_09930 PF00270 DEAD/DEAH box helicase NRZ29_09930 PF00271 Helicase conserved C-terminal domain NRZ29_09930 PF00570 HRDC domain NRZ29_09930 PF16124 RecQ zinc-binding NRZ29_09930 PF09382 RQC domain NRZ29_09935 PF00375 Sodium:dicarboxylate symporter family NRZ29_09940 PF03222 Tryptophan/tyrosine permease family NRZ29_09945 PF00293 NUDIX domain NRZ29_09950 PF04715 Anthranilate synthase component I, N terminal region NRZ29_09950 PF00425 chorismate binding enzyme NRZ29_09970 PF00343 Carbohydrate phosphorylase NRZ29_09975 PF00939 Sodium:sulfate symporter transmembrane region NRZ29_09980 PF00085 Thioredoxin NRZ29_09985 PF01627 Hpt domain NRZ29_09985 PF00672 HAMP domain NRZ29_09985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_09985 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_09985 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NRZ29_09985 PF00072 Response regulator receiver domain NRZ29_09990 PF00664 ABC transporter transmembrane region NRZ29_09990 PF00005 ABC transporter NRZ29_09995 PF00664 ABC transporter transmembrane region NRZ29_09995 PF00005 ABC transporter NRZ29_10015 PF01575 MaoC like domain NRZ29_10020 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NRZ29_10020 PF00561 alpha/beta hydrolase fold NRZ29_10040 PF08543 Phosphomethylpyrimidine kinase NRZ29_10045 PF03992 Antibiotic biosynthesis monooxygenase NRZ29_10050 PF00465 Iron-containing alcohol dehydrogenase NRZ29_10055 PF00583 Acetyltransferase (GNAT) family NRZ29_10065 PF01928 CYTH domain NRZ29_10075 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NRZ29_10085 PF13673 Acetyltransferase (GNAT) domain NRZ29_10090 PF00270 DEAD/DEAH box helicase NRZ29_10090 PF00271 Helicase conserved C-terminal domain NRZ29_10095 PF00255 Glutathione peroxidase NRZ29_10105 PF07478 D-ala D-ala ligase C-terminus NRZ29_10105 PF01820 D-ala D-ala ligase N-terminus NRZ29_10110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRZ29_10110 PF18029 Glyoxalase-like domain NRZ29_10115 PF03942 DTW domain NRZ29_10120 PF01925 Sulfite exporter TauE/SafE NRZ29_10125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_10125 PF03466 LysR substrate binding domain NRZ29_10135 PF14525 AraC-binding-like domain NRZ29_10135 PF12833 Helix-turn-helix domain NRZ29_10145 PF11398 Protein of unknown function (DUF2813) NRZ29_10155 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NRZ29_10155 PF00128 Alpha amylase, catalytic domain NRZ29_10200 PF00883 Cytosol aminopeptidase family, catalytic domain NRZ29_10200 PF02789 Cytosol aminopeptidase family, N-terminal domain NRZ29_10205 PF13419 Haloacid dehalogenase-like hydrolase NRZ29_10210 PF01546 Peptidase family M20/M25/M40 NRZ29_10210 PF07687 Peptidase dimerisation domain NRZ29_10215 PF00365 Phosphofructokinase NRZ29_10220 PF00121 Triosephosphate isomerase NRZ29_10225 PF02698 DUF218 domain NRZ29_10230 PF13847 Methyltransferase domain NRZ29_10235 PF17193 MukF C-terminal domain NRZ29_10235 PF17192 MukF middle domain NRZ29_10235 PF03882 MukF winged-helix domain NRZ29_10240 PF04288 MukE-like family NRZ29_10245 PF04310 MukB N-terminal NRZ29_10245 PF16330 MukB hinge domain NRZ29_10250 PF03330 Lytic transglycolase NRZ29_10250 PF05036 Sporulation related domain NRZ29_10260 PF01327 Polypeptide deformylase NRZ29_10290 PF02567 Phenazine biosynthesis-like protein NRZ29_10300 PF03831 PhnA domain NRZ29_10300 PF08274 PhnA Zinc-Ribbon NRZ29_10310 PF00574 Clp protease NRZ29_10320 PF00704 Glycosyl hydrolases family 18 NRZ29_10320 PF08329 Chitinase A, N-terminal domain NRZ29_10340 PF08448 PAS fold NRZ29_10340 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_10350 PF01713 Smr domain NRZ29_10355 PF05175 Methyltransferase small domain NRZ29_10360 PF01264 Chorismate synthase NRZ29_10370 PF00270 DEAD/DEAH box helicase NRZ29_10370 PF00271 Helicase conserved C-terminal domain NRZ29_10385 PF03222 Tryptophan/tyrosine permease family NRZ29_10390 PF00356 Bacterial regulatory proteins, lacI family NRZ29_10390 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRZ29_10395 PF00381 PTS HPr component phosphorylation site NRZ29_10395 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRZ29_10400 PF00294 pfkB family carbohydrate kinase NRZ29_10405 PF02378 Phosphotransferase system, EIIC NRZ29_10405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRZ29_10410 PF06560 Glucose-6-phosphate isomerase (GPI) NRZ29_10415 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRZ29_10415 PF00356 Bacterial regulatory proteins, lacI family NRZ29_10430 PF03830 PTS system sorbose subfamily IIB component NRZ29_10430 PF03610 PTS system fructose IIA component NRZ29_10435 PF03609 PTS system sorbose-specific iic component NRZ29_10440 PF03613 PTS system mannose/fructose/sorbose family IID component NRZ29_10450 PF06945 Protein of unknown function (DUF1289) NRZ29_10455 PF06725 3D domain NRZ29_10455 PF03562 MltA specific insert domain NRZ29_10460 PF00111 2Fe-2S iron-sulfur cluster binding domain NRZ29_10465 PF00268 Ribonucleotide reductase, small chain NRZ29_10470 PF03477 ATP cone domain NRZ29_10470 PF00317 Ribonucleotide reductase, all-alpha domain NRZ29_10470 PF02867 Ribonucleotide reductase, barrel domain NRZ29_10475 PF13419 Haloacid dehalogenase-like hydrolase NRZ29_10485 PF03989 DNA gyrase C-terminal domain, beta-propeller NRZ29_10485 PF00521 DNA gyrase/topoisomerase IV, subunit A NRZ29_10495 PF04055 Radical SAM superfamily NRZ29_10505 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NRZ29_10505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NRZ29_10505 PF03129 Anticodon binding domain NRZ29_10505 PF02824 TGS domain NRZ29_10510 PF00707 Translation initiation factor IF-3, C-terminal domain NRZ29_10510 PF05198 Translation initiation factor IF-3, N-terminal domain NRZ29_10515 PF01632 Ribosomal protein L35 NRZ29_10520 PF00453 Ribosomal protein L20 NRZ29_10525 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NRZ29_10525 PF01409 tRNA synthetases class II core domain (F) NRZ29_10530 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NRZ29_10530 PF01588 Putative tRNA binding domain NRZ29_10530 PF03147 Ferredoxin-fold anticodon binding domain NRZ29_10530 PF03484 tRNA synthetase B5 domain NRZ29_10530 PF03483 B3/4 domain NRZ29_10535 PF00216 Bacterial DNA-binding protein NRZ29_10540 PF09456 RcsC Alpha-Beta-Loop (ABL) NRZ29_10540 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_10540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_10540 PF00072 Response regulator receiver domain NRZ29_10565 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_10565 PF03707 Bacterial signalling protein N terminal repeat NRZ29_10565 PF00563 EAL domain NRZ29_10570 PF00356 Bacterial regulatory proteins, lacI family NRZ29_10575 PF00294 pfkB family carbohydrate kinase NRZ29_10580 PF13407 Periplasmic binding protein domain NRZ29_10585 PF02653 Branched-chain amino acid transport system / permease component NRZ29_10590 PF00005 ABC transporter NRZ29_10595 PF05025 RbsD / FucU transport protein family NRZ29_10600 PF13417 Glutathione S-transferase, N-terminal domain NRZ29_10615 PF01171 PP-loop family NRZ29_10620 PF00582 Universal stress protein family NRZ29_10625 PF13545 Crp-like helix-turn-helix domain NRZ29_10625 PF00027 Cyclic nucleotide-binding domain NRZ29_10640 PF00403 Heavy-metal-associated domain NRZ29_10650 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NRZ29_10650 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP NRZ29_10665 PF00115 Cytochrome C and Quinol oxidase polypeptide I NRZ29_10675 PF13185 GAF domain NRZ29_10680 PF17516 ProQ C-terminal domain NRZ29_10680 PF04352 ProQ/FINO family NRZ29_10685 PF11818 C-terminal domain of tail specific protease (DUF3340) NRZ29_10685 PF00595 PDZ domain NRZ29_10685 PF17804 Tail specific protease N-terminal domain NRZ29_10685 PF03572 Peptidase family S41 NRZ29_10690 PF11940 Domain of unknown function (DUF3458) Ig-like fold NRZ29_10690 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NRZ29_10690 PF01433 Peptidase family M1 domain NRZ29_10700 PF05088 Bacterial NAD-glutamate dehydrogenase NRZ29_10705 PF01180 Dihydroorotate dehydrogenase NRZ29_10710 PF07126 Cell-division protein ZapC NRZ29_10715 PF02926 THUMP domain NRZ29_10715 PF01170 Putative RNA methylase family UPF0020 NRZ29_10715 PF10672 S-adenosylmethionine-dependent methyltransferase NRZ29_10725 PF00005 ABC transporter NRZ29_10725 PF16326 ABC transporter C-terminal domain NRZ29_10725 PF12848 ABC transporter NRZ29_10735 PF04957 Ribosome modulation factor NRZ29_10740 PF07977 FabA-like domain NRZ29_10745 PF13654 AAA domain NRZ29_10745 PF05362 Lon protease (S16) C-terminal proteolytic domain NRZ29_10755 PF07130 YebG protein NRZ29_10765 PF00106 short chain dehydrogenase NRZ29_10790 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NRZ29_10790 PF06974 Protein of unknown function (DUF1298) NRZ29_10805 PF03972 MmgE/PrpD family NRZ29_10810 PF00285 Citrate synthase, C-terminal domain NRZ29_10825 PF04403 Paraquat-inducible protein A NRZ29_10830 PF02470 MlaD protein NRZ29_10835 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF NRZ29_10835 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF NRZ29_10835 PF01189 16S rRNA methyltransferase RsmB/F NRZ29_10845 PF00589 Phage integrase family NRZ29_10850 PF01026 TatD related DNase NRZ29_10855 PF09115 DNA polymerase III, delta subunit, C terminal NRZ29_10860 PF02223 Thymidylate kinase NRZ29_10865 PF02618 YceG-like family NRZ29_10870 PF01063 Amino-transferase class IV NRZ29_10875 PF00109 Beta-ketoacyl synthase, N-terminal domain NRZ29_10875 PF02801 Beta-ketoacyl synthase, C-terminal domain NRZ29_10880 PF00550 Phosphopantetheine attachment site NRZ29_10890 PF00698 Acyl transferase domain NRZ29_10895 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NRZ29_10895 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NRZ29_10900 PF02504 Fatty acid synthesis protein NRZ29_10905 PF01783 Ribosomal L32p protein family NRZ29_10910 PF02620 Large ribosomal RNA subunit accumulation protein YceD NRZ29_10920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_10920 PF03466 LysR substrate binding domain NRZ29_10925 PF07690 Major Facilitator Superfamily NRZ29_10930 PF02545 Maf-like protein NRZ29_10940 PF00849 RNA pseudouridylate synthase NRZ29_10940 PF01479 S4 domain NRZ29_10945 PF00575 S1 RNA binding domain NRZ29_10945 PF10150 Ribonuclease E/G family NRZ29_10945 PF12111 Polyribonucleotide phosphorylase C terminal NRZ29_10950 PF01384 Phosphate transporter family NRZ29_10955 PF00692 dUTPase NRZ29_10960 PF00485 Phosphoribulokinase / Uridine kinase family NRZ29_10965 PF10609 NUBPL iron-transfer P-loop NTPase NRZ29_10970 PF08264 Anticodon-binding domain of tRNA NRZ29_10970 PF09334 tRNA synthetases class I (M) NRZ29_10970 PF01588 Putative tRNA binding domain NRZ29_10975 PF02798 Glutathione S-transferase, N-terminal domain NRZ29_10975 PF00043 Glutathione S-transferase, C-terminal domain NRZ29_10980 PF00708 Acylphosphatase NRZ29_10985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_10985 PF00672 HAMP domain NRZ29_10985 PF12729 Four helix bundle sensory module for signal transduction NRZ29_10990 PF17785 PUA-like domain NRZ29_10990 PF10672 S-adenosylmethionine-dependent methyltransferase NRZ29_11005 PF00586 AIR synthase related protein, N-terminal domain NRZ29_11005 PF02769 AIR synthase related protein, C-terminal domain NRZ29_11015 PF00753 Metallo-beta-lactamase superfamily NRZ29_11020 PF00072 Response regulator receiver domain NRZ29_11025 PF00072 Response regulator receiver domain NRZ29_11025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NRZ29_11025 PF00672 HAMP domain NRZ29_11025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_11025 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_11025 PF01627 Hpt domain NRZ29_11030 PF01386 Ribosomal L25p family NRZ29_11040 PF00270 DEAD/DEAH box helicase NRZ29_11040 PF11898 Domain of unknown function (DUF3418) NRZ29_11040 PF04408 Helicase associated domain (HA2) NRZ29_11040 PF00271 Helicase conserved C-terminal domain NRZ29_11040 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NRZ29_11045 PF00571 CBS domain NRZ29_11045 PF02272 DHHA1 domain NRZ29_11045 PF01743 Poly A polymerase head domain NRZ29_11045 PF01368 DHH family NRZ29_11050 PF00196 Bacterial regulatory proteins, luxR family NRZ29_11050 PF00072 Response regulator receiver domain NRZ29_11065 PF02575 YbaB/EbfC DNA-binding family NRZ29_11070 PF12169 DNA polymerase III subunits gamma and tau domain III NRZ29_11070 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NRZ29_11070 PF12170 DNA polymerase III tau subunit V interacting with alpha NRZ29_11075 PF00156 Phosphoribosyl transferase domain NRZ29_11080 PF04304 Protein of unknown function (DUF454) NRZ29_11085 PF01207 Dihydrouridine synthase (Dus) NRZ29_11095 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ29_11100 PF01612 3'-5' exonuclease NRZ29_11100 PF00570 HRDC domain NRZ29_11105 PF00501 AMP-binding enzyme NRZ29_11105 PF13193 AMP-binding enzyme C-terminal domain NRZ29_11110 PF12697 Alpha/beta hydrolase family NRZ29_11110 PF08241 Methyltransferase domain NRZ29_11120 PF00814 Glycoprotease family NRZ29_11125 PF04851 Type III restriction enzyme, res subunit NRZ29_11125 PF13307 Helicase C-terminal domain NRZ29_11135 PF08029 HisG, C-terminal domain NRZ29_11135 PF01634 ATP phosphoribosyltransferase NRZ29_11140 PF00815 Histidinol dehydrogenase NRZ29_11145 PF00155 Aminotransferase class I and II NRZ29_11150 PF08645 Polynucleotide kinase 3 phosphatase NRZ29_11150 PF00475 Imidazoleglycerol-phosphate dehydratase NRZ29_11155 PF00117 Glutamine amidotransferase class-I NRZ29_11160 PF00977 Histidine biosynthesis protein NRZ29_11165 PF00072 Response regulator receiver domain NRZ29_11170 PF08448 PAS fold NRZ29_11170 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_11175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_11175 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_11175 PF01627 Hpt domain NRZ29_11175 PF00072 Response regulator receiver domain NRZ29_11180 PF00977 Histidine biosynthesis protein NRZ29_11185 PF01502 Phosphoribosyl-AMP cyclohydrolase NRZ29_11185 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NRZ29_11195 PF13280 WYL domain NRZ29_11195 PF08279 HTH domain NRZ29_11205 PF03606 C4-dicarboxylate anaerobic carrier NRZ29_11215 PF05433 Glycine zipper 2TM domain NRZ29_11225 PF00111 2Fe-2S iron-sulfur cluster binding domain NRZ29_11225 PF01799 [2Fe-2S] binding domain NRZ29_11230 PF00941 FAD binding domain in molybdopterin dehydrogenase NRZ29_11230 PF03450 CO dehydrogenase flavoprotein C-terminal domain NRZ29_11235 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NRZ29_11235 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NRZ29_11240 PF00860 Permease family NRZ29_11245 PF01979 Amidohydrolase family NRZ29_11250 PF00860 Permease family NRZ29_11255 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NRZ29_11255 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NRZ29_11255 PF01799 [2Fe-2S] binding domain NRZ29_11260 PF00941 FAD binding domain in molybdopterin dehydrogenase NRZ29_11265 PF01979 Amidohydrolase family NRZ29_11270 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NRZ29_11270 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ29_11275 PF12804 MobA-like NTP transferase domain NRZ29_11285 PF02625 XdhC and CoxI family NRZ29_11285 PF13478 XdhC Rossmann domain NRZ29_11290 PF00892 EamA-like transporter family NRZ29_11295 PF00696 Amino acid kinase family NRZ29_11300 PF01979 Amidohydrolase family NRZ29_11305 PF07687 Peptidase dimerisation domain NRZ29_11305 PF01546 Peptidase family M20/M25/M40 NRZ29_11310 PF00291 Pyridoxal-phosphate dependent enzyme NRZ29_11315 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NRZ29_11315 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NRZ29_11320 PF13188 PAS domain NRZ29_11320 PF02954 Bacterial regulatory protein, Fis family NRZ29_11320 PF00158 Sigma-54 interaction domain NRZ29_11340 PF07152 YaeQ protein NRZ29_11350 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NRZ29_11350 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NRZ29_11350 PF00378 Enoyl-CoA hydratase/isomerase NRZ29_11355 PF02803 Thiolase, C-terminal domain NRZ29_11355 PF00108 Thiolase, N-terminal domain NRZ29_11360 PF07726 ATPase family associated with various cellular activities (AAA) NRZ29_11360 PF17863 AAA lid domain NRZ29_11365 PF01882 Protein of unknown function DUF58 NRZ29_11390 PF04542 Sigma-70 region 2 NRZ29_11390 PF08281 Sigma-70, region 4 NRZ29_11400 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NRZ29_11405 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NRZ29_11410 PF00563 EAL domain NRZ29_11410 PF08668 HDOD domain NRZ29_11415 PF00108 Thiolase, N-terminal domain NRZ29_11415 PF02803 Thiolase, C-terminal domain NRZ29_11420 PF09278 MerR, DNA binding NRZ29_11420 PF00376 MerR family regulatory protein NRZ29_11425 PF00375 Sodium:dicarboxylate symporter family NRZ29_11430 PF06865 Pyrimidine/purine nucleoside phosphorylase NRZ29_11435 PF03315 Serine dehydratase beta chain NRZ29_11435 PF03313 Serine dehydratase alpha chain NRZ29_11440 PF03313 Serine dehydratase alpha chain NRZ29_11440 PF03315 Serine dehydratase beta chain NRZ29_11445 PF13406 Transglycosylase SLT domain NRZ29_11450 PF05166 YcgL domain NRZ29_11455 PF05209 Septum formation inhibitor MinC, N-terminal domain NRZ29_11455 PF03775 Septum formation inhibitor MinC, C-terminal domain NRZ29_11460 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NRZ29_11465 PF03776 Septum formation topological specificity factor MinE NRZ29_11470 PF04269 Protein of unknown function, DUF440 NRZ29_11475 PF00912 Transglycosylase NRZ29_11485 PF04269 Protein of unknown function, DUF440 NRZ29_11495 PF17783 CvfB-like winged helix domain NRZ29_11495 PF13509 S1 domain NRZ29_11520 PF02525 Flavodoxin-like fold NRZ29_11525 PF00892 EamA-like transporter family NRZ29_11530 PF01370 NAD dependent epimerase/dehydratase family NRZ29_11530 PF02222 ATP-grasp domain NRZ29_11535 PF13419 Haloacid dehalogenase-like hydrolase NRZ29_11545 PF00677 Lumazine binding domain NRZ29_11550 PF06786 Uncharacterised protein family (UPF0253) NRZ29_11555 PF01554 MatE NRZ29_11585 PF00136 DNA polymerase family B NRZ29_11585 PF03104 DNA polymerase family B, exonuclease domain NRZ29_11595 PF17151 Periplasmic sensor domain NRZ29_11595 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_11610 PF03279 Bacterial lipid A biosynthesis acyltransferase NRZ29_11615 PF03279 Bacterial lipid A biosynthesis acyltransferase NRZ29_11625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_11625 PF03466 LysR substrate binding domain NRZ29_11630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NRZ29_11630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRZ29_11635 PF01261 Xylose isomerase-like TIM barrel NRZ29_11640 PF00933 Glycosyl hydrolase family 3 N terminal domain NRZ29_11650 PF03466 LysR substrate binding domain NRZ29_11650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_11660 PF01966 HD domain NRZ29_11670 PF00563 EAL domain NRZ29_11670 PF03707 Bacterial signalling protein N terminal repeat NRZ29_11670 PF13188 PAS domain NRZ29_11670 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_11675 PF00232 Glycosyl hydrolase family 1 NRZ29_11680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_11680 PF03466 LysR substrate binding domain NRZ29_11720 PF01925 Sulfite exporter TauE/SafE NRZ29_11725 PF13520 Amino acid permease NRZ29_11735 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NRZ29_11735 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NRZ29_11740 PF00378 Enoyl-CoA hydratase/isomerase NRZ29_11745 PF00378 Enoyl-CoA hydratase/isomerase NRZ29_11750 PF02770 Acyl-CoA dehydrogenase, middle domain NRZ29_11750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRZ29_11750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRZ29_11755 PF00171 Aldehyde dehydrogenase family NRZ29_11760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRZ29_11760 PF02770 Acyl-CoA dehydrogenase, middle domain NRZ29_11760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRZ29_11765 PF01039 Carboxyl transferase domain NRZ29_11770 PF00378 Enoyl-CoA hydratase/isomerase NRZ29_11775 PF02785 Biotin carboxylase C-terminal domain NRZ29_11775 PF00289 Biotin carboxylase, N-terminal domain NRZ29_11775 PF00364 Biotin-requiring enzyme NRZ29_11775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NRZ29_11780 PF00682 HMGL-like NRZ29_11785 PF00376 MerR family regulatory protein NRZ29_11785 PF09278 MerR, DNA binding NRZ29_11800 PF01184 GPR1/FUN34/yaaH family NRZ29_11805 PF06167 Glucose-regulated metallo-peptidase M90 NRZ29_11815 PF01235 Sodium:alanine symporter family NRZ29_11850 PF00378 Enoyl-CoA hydratase/isomerase NRZ29_11865 PF04341 Protein of unknown function, DUF485 NRZ29_11870 PF00474 Sodium:solute symporter family NRZ29_11875 PF00005 ABC transporter NRZ29_11875 PF12848 ABC transporter NRZ29_11880 PF13145 PPIC-type PPIASE domain NRZ29_11885 PF00216 Bacterial DNA-binding protein NRZ29_11890 PF00004 ATPase family associated with various cellular activities (AAA) NRZ29_11890 PF05362 Lon protease (S16) C-terminal proteolytic domain NRZ29_11890 PF02190 ATP-dependent protease La (LON) substrate-binding domain NRZ29_11895 PF10431 C-terminal, D2-small domain, of ClpB protein NRZ29_11895 PF06689 ClpX C4-type zinc finger NRZ29_11895 PF07724 AAA domain (Cdc48 subfamily) NRZ29_11900 PF00574 Clp protease NRZ29_11905 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRZ29_11905 PF05698 Bacterial trigger factor protein (TF) C-terminus NRZ29_11905 PF05697 Bacterial trigger factor protein (TF) NRZ29_11920 PF02687 FtsX-like permease family NRZ29_11920 PF12704 MacB-like periplasmic core domain NRZ29_11925 PF00005 ABC transporter NRZ29_11930 PF12704 MacB-like periplasmic core domain NRZ29_11930 PF02687 FtsX-like permease family NRZ29_11940 PF00270 DEAD/DEAH box helicase NRZ29_11940 PF00271 Helicase conserved C-terminal domain NRZ29_11940 PF03461 TRCF domain NRZ29_11940 PF17757 UvrB interaction domain NRZ29_11940 PF02559 CarD-like/TRCF domain NRZ29_11945 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NRZ29_11950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ29_11955 PF00892 EamA-like transporter family NRZ29_11965 PF00300 Histidine phosphatase superfamily (branch 1) NRZ29_11970 PF00675 Insulinase (Peptidase family M16) NRZ29_11970 PF05193 Peptidase M16 inactive domain NRZ29_11975 PF05724 Thiopurine S-methyltransferase (TPMT) NRZ29_11990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NRZ29_11990 PF12833 Helix-turn-helix domain NRZ29_11990 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NRZ29_11990 PF02805 Metal binding domain of Ada NRZ29_12015 PF00117 Glutamine amidotransferase class-I NRZ29_12015 PF00958 GMP synthase C terminal domain NRZ29_12015 PF02540 NAD synthase NRZ29_12020 PF00571 CBS domain NRZ29_12020 PF00478 IMP dehydrogenase / GMP reductase domain NRZ29_12025 PF02705 K+ potassium transporter NRZ29_12035 PF01618 MotA/TolQ/ExbB proton channel family NRZ29_12040 PF02472 Biopolymer transport protein ExbD/TolR NRZ29_12045 PF00892 EamA-like transporter family NRZ29_12050 PF02601 Exonuclease VII, large subunit NRZ29_12050 PF13742 OB-fold nucleic acid binding domain NRZ29_12055 PF04055 Radical SAM superfamily NRZ29_12060 PF00672 HAMP domain NRZ29_12060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_12065 PF00793 DAHP synthetase I family NRZ29_12070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NRZ29_12075 PF00266 Aminotransferase class-V NRZ29_12080 PF01012 Electron transfer flavoprotein domain NRZ29_12080 PF00766 Electron transfer flavoprotein FAD-binding domain NRZ29_12085 PF01012 Electron transfer flavoprotein domain NRZ29_12095 PF01544 CorA-like Mg2+ transporter protein NRZ29_12100 PF11143 Protein of unknown function (DUF2919) NRZ29_12115 PF07715 TonB-dependent Receptor Plug Domain NRZ29_12115 PF00593 TonB dependent receptor NRZ29_12120 PF01032 FecCD transport family NRZ29_12125 PF01032 FecCD transport family NRZ29_12130 PF00005 ABC transporter NRZ29_12135 PF17837 4'-phosphopantetheinyl transferase N-terminal domain NRZ29_12135 PF01648 4'-phosphopantetheinyl transferase superfamily NRZ29_12140 PF01497 Periplasmic binding protein NRZ29_12145 PF01212 Beta-eliminating lyase NRZ29_12155 PF04244 Deoxyribodipyrimidine photo-lyase-related protein NRZ29_12160 PF01266 FAD dependent oxidoreductase NRZ29_12170 PF07969 Amidohydrolase family NRZ29_12175 PF00571 CBS domain NRZ29_12175 PF00478 IMP dehydrogenase / GMP reductase domain NRZ29_12185 PF01717 Cobalamin-independent synthase, Catalytic domain NRZ29_12185 PF08267 Cobalamin-independent synthase, N-terminal domain NRZ29_12190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_12190 PF03466 LysR substrate binding domain NRZ29_12200 PF07715 TonB-dependent Receptor Plug Domain NRZ29_12200 PF00593 TonB dependent receptor NRZ29_12205 PF12833 Helix-turn-helix domain NRZ29_12210 PF00106 short chain dehydrogenase NRZ29_12215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_12215 PF03466 LysR substrate binding domain NRZ29_12220 PF13460 NAD(P)H-binding NRZ29_12230 PF01053 Cys/Met metabolism PLP-dependent enzyme NRZ29_12235 PF05193 Peptidase M16 inactive domain NRZ29_12235 PF00675 Insulinase (Peptidase family M16) NRZ29_12240 PF02774 Semialdehyde dehydrogenase, dimerisation domain NRZ29_12240 PF01118 Semialdehyde dehydrogenase, NAD binding domain NRZ29_12245 PF00893 Small Multidrug Resistance protein NRZ29_12250 PF18381 YcaO cyclodehydratase C-terminal domain NRZ29_12250 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding NRZ29_12255 PF01226 Formate/nitrite transporter NRZ29_12260 PF02901 Pyruvate formate lyase-like NRZ29_12260 PF01228 Glycine radical NRZ29_12270 PF00202 Aminotransferase class-III NRZ29_12275 PF00266 Aminotransferase class-V NRZ29_12280 PF07702 UTRA domain NRZ29_12280 PF00392 Bacterial regulatory proteins, gntR family NRZ29_12290 PF00005 ABC transporter NRZ29_12295 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_12300 PF01266 FAD dependent oxidoreductase NRZ29_12305 PF03692 Putative zinc- or iron-chelating domain NRZ29_12315 PF02629 CoA binding domain NRZ29_12315 PF00549 CoA-ligase NRZ29_12320 PF08442 ATP-grasp domain NRZ29_12320 PF00549 CoA-ligase NRZ29_12325 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NRZ29_12325 PF02817 e3 binding domain NRZ29_12325 PF00364 Biotin-requiring enzyme NRZ29_12330 PF00676 Dehydrogenase E1 component NRZ29_12330 PF16870 2-oxoglutarate dehydrogenase C-terminal NRZ29_12330 PF02779 Transketolase, pyrimidine binding domain NRZ29_12330 PF16078 2-oxoglutarate dehydrogenase N-terminus NRZ29_12335 PF13085 2Fe-2S iron-sulfur cluster binding domain NRZ29_12340 PF00890 FAD binding domain NRZ29_12340 PF02910 Fumarate reductase flavoprotein C-term NRZ29_12345 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NRZ29_12350 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NRZ29_12355 PF00285 Citrate synthase, C-terminal domain NRZ29_12370 PF00109 Beta-ketoacyl synthase, N-terminal domain NRZ29_12370 PF02801 Beta-ketoacyl synthase, C-terminal domain NRZ29_12375 PF01266 FAD dependent oxidoreductase NRZ29_12375 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NRZ29_12385 PF03606 C4-dicarboxylate anaerobic carrier NRZ29_12400 PF01863 Protein of unknown function DUF45 NRZ29_12415 PF01197 Ribosomal protein L31 NRZ29_12420 PF00444 Ribosomal protein L36 NRZ29_12425 PF02678 Pirin NRZ29_12425 PF05726 Pirin C-terminal cupin domain NRZ29_12430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_12430 PF03466 LysR substrate binding domain NRZ29_12435 PF02311 AraC-like ligand binding domain NRZ29_12435 PF12833 Helix-turn-helix domain NRZ29_12440 PF02653 Branched-chain amino acid transport system / permease component NRZ29_12445 PF00005 ABC transporter NRZ29_12450 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRZ29_12455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NRZ29_12460 PF00596 Class II Aldolase and Adducin N-terminal domain NRZ29_12465 PF02610 L-arabinose isomerase NRZ29_12465 PF11762 L-arabinose isomerase C-terminal domain NRZ29_12470 PF00929 Exonuclease NRZ29_12470 PF08411 Exonuclease C-terminal NRZ29_12485 PF03788 LrgA family NRZ29_12490 PF04172 LrgB-like family NRZ29_12495 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NRZ29_12495 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region NRZ29_12500 PF00501 AMP-binding enzyme NRZ29_12505 PF08891 YfcL protein NRZ29_12515 PF03741 Integral membrane protein TerC family NRZ29_12520 PF00691 OmpA family NRZ29_12525 PF17152 Periplasmic sensor domain NRZ29_12525 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_12530 PF13689 YfiR/HmsC-like NRZ29_12535 PF18024 Helix-turn-helix domain NRZ29_12535 PF00158 Sigma-54 interaction domain NRZ29_12540 PF01329 Pterin 4 alpha carbinolamine dehydratase NRZ29_12545 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NRZ29_12550 PF05128 Domain of unknown function (DUF697) NRZ29_12555 PF04317 YcjX-like family, DUF463 NRZ29_12565 PF06667 Phage shock protein B NRZ29_12570 PF04012 PspA/IM30 family NRZ29_12575 PF02954 Bacterial regulatory protein, Fis family NRZ29_12575 PF00158 Sigma-54 interaction domain NRZ29_12580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ29_12585 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_12590 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_12590 PF12911 N-terminal TM domain of oligopeptide transport permease C NRZ29_12595 PF00005 ABC transporter NRZ29_12595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRZ29_12600 PF00005 ABC transporter NRZ29_12605 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NRZ29_12610 PF00156 Phosphoribosyl transferase domain NRZ29_12615 PF02674 Colicin V production protein NRZ29_12620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NRZ29_12620 PF02403 Seryl-tRNA synthetase N-terminal domain NRZ29_12625 PF00004 ATPase family associated with various cellular activities (AAA) NRZ29_12625 PF16193 AAA C-terminal domain NRZ29_12625 PF12002 MgsA AAA+ ATPase C terminal NRZ29_12630 PF03548 Outer membrane lipoprotein carrier protein LolA NRZ29_12635 PF01580 FtsK/SpoIIIE family NRZ29_12635 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NRZ29_12635 PF09397 Ftsk gamma domain NRZ29_12635 PF17854 FtsK alpha domain NRZ29_12640 PF01037 Lrp/AsnC ligand binding domain NRZ29_12645 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NRZ29_12645 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NRZ29_12650 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ29_12655 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_12655 PF17158 Membrane-associated sensor, integral membrane domain NRZ29_12660 PF05433 Glycine zipper 2TM domain NRZ29_12665 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NRZ29_12670 PF04377 Arginine-tRNA-protein transferase, C terminus NRZ29_12670 PF04376 Arginine-tRNA-protein transferase, N terminus NRZ29_12675 PF01176 Translation initiation factor 1A / IF-1 NRZ29_12680 PF10431 C-terminal, D2-small domain, of ClpB protein NRZ29_12680 PF02861 Clp amino terminal domain, pathogenicity island component NRZ29_12680 PF17871 AAA lid domain NRZ29_12680 PF07724 AAA domain (Cdc48 subfamily) NRZ29_12680 PF00004 ATPase family associated with various cellular activities (AAA) NRZ29_12685 PF02617 ATP-dependent Clp protease adaptor protein ClpS NRZ29_12690 PF00313 'Cold-shock' DNA-binding domain NRZ29_12695 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NRZ29_12695 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NRZ29_12745 PF04717 Type VI secretion system, phage-baseplate injector NRZ29_12760 PF06761 Intracellular multiplication and human macrophage-killing NRZ29_12760 PF14331 ImcF-related N-terminal domain NRZ29_12760 PF06744 Type VI secretion protein IcmF C-terminal NRZ29_12775 PF02954 Bacterial regulatory protein, Fis family NRZ29_12775 PF00158 Sigma-54 interaction domain NRZ29_12780 PF10431 C-terminal, D2-small domain, of ClpB protein NRZ29_12780 PF07724 AAA domain (Cdc48 subfamily) NRZ29_12780 PF00004 ATPase family associated with various cellular activities (AAA) NRZ29_12780 PF17871 AAA lid domain NRZ29_12790 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE NRZ29_12810 PF05947 Type VI secretion system, TssF NRZ29_12820 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NRZ29_12850 PF04717 Type VI secretion system, phage-baseplate injector NRZ29_12855 PF05638 Type VI secretion system effector, Hcp NRZ29_12870 PF10722 Putative bacterial sensory transduction regulator NRZ29_12880 PF00265 Thymidine kinase NRZ29_12885 PF03553 Na+/H+ antiporter family NRZ29_12890 PF00816 H-NS histone family NRZ29_12895 PF01923 Cobalamin adenosyltransferase NRZ29_12900 PF12843 Putative quorum-sensing-regulated virulence factor NRZ29_12905 PF04055 Radical SAM superfamily NRZ29_12910 PF06508 Queuosine biosynthesis protein QueC NRZ29_12925 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NRZ29_12930 PF18073 Rubredoxin metal binding domain NRZ29_12940 PF00216 Bacterial DNA-binding protein NRZ29_12945 PF00575 S1 RNA binding domain NRZ29_12950 PF02224 Cytidylate kinase NRZ29_12955 PF00925 GTP cyclohydrolase II NRZ29_12960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_12960 PF03466 LysR substrate binding domain NRZ29_12965 PF03466 LysR substrate binding domain NRZ29_12965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_12970 PF07690 Major Facilitator Superfamily NRZ29_12985 PF00881 Nitroreductase family NRZ29_12990 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_12990 PF13188 PAS domain NRZ29_12990 PF03707 Bacterial signalling protein N terminal repeat NRZ29_12990 PF00563 EAL domain NRZ29_13000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_13000 PF03466 LysR substrate binding domain NRZ29_13005 PF00072 Response regulator receiver domain NRZ29_13015 PF01212 Beta-eliminating lyase NRZ29_13030 PF00248 Aldo/keto reductase family NRZ29_13035 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NRZ29_13045 PF03411 Penicillin-insensitive murein endopeptidase NRZ29_13055 PF04536 TPM domain NRZ29_13075 PF01618 MotA/TolQ/ExbB proton channel family NRZ29_13080 PF13677 Membrane MotB of proton-channel complex MotA/MotB NRZ29_13080 PF00691 OmpA family NRZ29_13085 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NRZ29_13090 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NRZ29_13095 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NRZ29_13095 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NRZ29_13105 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NRZ29_13105 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NRZ29_13110 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NRZ29_13110 PF00384 Molybdopterin oxidoreductase NRZ29_13110 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NRZ29_13115 PF00146 NADH dehydrogenase NRZ29_13120 PF12838 4Fe-4S dicluster domain NRZ29_13125 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NRZ29_13130 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NRZ29_13135 PF00361 Proton-conducting membrane transporter NRZ29_13135 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NRZ29_13140 PF00361 Proton-conducting membrane transporter NRZ29_13145 PF00361 Proton-conducting membrane transporter NRZ29_13150 PF02769 AIR synthase related protein, C-terminal domain NRZ29_13150 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NRZ29_13150 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NRZ29_13155 PF01464 Transglycosylase SLT domain NRZ29_13155 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ29_13160 PF07191 zinc-ribbons NRZ29_13165 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NRZ29_13165 PF01926 50S ribosome-binding GTPase NRZ29_13170 PF13360 PQQ-like domain NRZ29_13175 PF09976 Tetratricopeptide repeat-like domain NRZ29_13180 PF03129 Anticodon binding domain NRZ29_13180 PF13393 Histidyl-tRNA synthetase NRZ29_13185 PF04551 GcpE protein NRZ29_13190 PF13464 Domain of unknown function (DUF4115) NRZ29_13200 PF04055 Radical SAM superfamily NRZ29_13205 PF00334 Nucleoside diphosphate kinase NRZ29_13210 PF12404 Peptidase NRZ29_13210 PF00883 Cytosol aminopeptidase family, catalytic domain NRZ29_13215 PF12404 Peptidase NRZ29_13215 PF00883 Cytosol aminopeptidase family, catalytic domain NRZ29_13220 PF00111 2Fe-2S iron-sulfur cluster binding domain NRZ29_13225 PF00012 Hsp70 protein NRZ29_13230 PF07743 HSCB C-terminal oligomerisation domain NRZ29_13235 PF01521 Iron-sulphur cluster biosynthesis NRZ29_13240 PF01592 NifU-like N terminal domain NRZ29_13245 PF00266 Aminotransferase class-V NRZ29_13250 PF02082 Transcriptional regulator NRZ29_13255 PF00588 SpoU rRNA Methylase family NRZ29_13265 PF02036 SCP-2 sterol transfer family NRZ29_13270 PF01136 Peptidase family U32 NRZ29_13275 PF01136 Peptidase family U32 NRZ29_13280 PF07719 Tetratricopeptide repeat NRZ29_13280 PF13181 Tetratricopeptide repeat NRZ29_13290 PF07549 SecD/SecF GG Motif NRZ29_13290 PF02355 Protein export membrane protein NRZ29_13295 PF07549 SecD/SecF GG Motif NRZ29_13295 PF13721 SecD export protein N-terminal TM region NRZ29_13295 PF02355 Protein export membrane protein NRZ29_13300 PF02699 Preprotein translocase subunit NRZ29_13305 PF01702 Queuine tRNA-ribosyltransferase NRZ29_13310 PF02547 Queuosine biosynthesis protein NRZ29_13315 PF00571 CBS domain NRZ29_13320 PF10417 C-terminal domain of 1-Cys peroxiredoxin NRZ29_13320 PF00578 AhpC/TSA family NRZ29_13325 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ29_13325 PF13192 Thioredoxin domain NRZ29_13330 PF07690 Major Facilitator Superfamily NRZ29_13335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_13335 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_13335 PF00989 PAS fold NRZ29_13345 PF08241 Methyltransferase domain NRZ29_13350 PF03960 ArsC family NRZ29_13355 PF01758 Sodium Bile acid symporter family NRZ29_13360 PF01022 Bacterial regulatory protein, arsR family NRZ29_13365 PF02347 Glycine cleavage system P-protein NRZ29_13370 PF01597 Glycine cleavage H-protein NRZ29_13375 PF08669 Glycine cleavage T-protein C-terminal barrel domain NRZ29_13375 PF01571 Aminomethyltransferase folate-binding domain NRZ29_13380 PF01494 FAD binding domain NRZ29_13385 PF01494 FAD binding domain NRZ29_13390 PF03695 Uncharacterised protein family (UPF0149) NRZ29_13395 PF05164 Cell division protein ZapA NRZ29_13405 PF07690 Major Facilitator Superfamily NRZ29_13410 PF02798 Glutathione S-transferase, N-terminal domain NRZ29_13410 PF00043 Glutathione S-transferase, C-terminal domain NRZ29_13420 PF00459 Inositol monophosphatase family NRZ29_13425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_13425 PF12729 Four helix bundle sensory module for signal transduction NRZ29_13425 PF00672 HAMP domain NRZ29_13430 PF02535 ZIP Zinc transporter NRZ29_13440 PF01048 Phosphorylase superfamily NRZ29_13450 PF01497 Periplasmic binding protein NRZ29_13465 PF02561 Flagellar protein FliS NRZ29_13470 PF02465 Flagellar hook-associated protein 2 N-terminus NRZ29_13470 PF07195 Flagellar hook-associated protein 2 C-terminus NRZ29_13470 PF07196 Flagellin hook IN motif NRZ29_13480 PF07196 Flagellin hook IN motif NRZ29_13480 PF00669 Bacterial flagellin N-terminal helical region NRZ29_13480 PF00700 Bacterial flagellin C-terminal helical region NRZ29_13485 PF00700 Bacterial flagellin C-terminal helical region NRZ29_13485 PF00669 Bacterial flagellin N-terminal helical region NRZ29_13490 PF03458 UPF0126 domain NRZ29_13500 PF02568 Thiamine biosynthesis protein (ThiI) NRZ29_13500 PF02926 THUMP domain NRZ29_13510 PF00905 Penicillin binding protein transpeptidase domain NRZ29_13510 PF00912 Transglycosylase NRZ29_13510 PF06832 Penicillin-Binding Protein C-terminus Family NRZ29_13515 PF07678 A-macroglobulin TED domain NRZ29_13515 PF00207 Alpha-2-macroglobulin family NRZ29_13515 PF07703 Alpha-2-macroglobulin bait region domain NRZ29_13515 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain NRZ29_13515 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain NRZ29_13515 PF11974 Bacterial alpha-2-macroglobulin MG3 domain NRZ29_13515 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain NRZ29_13515 PF17962 Bacterial macroglobulin domain 6 NRZ29_13515 PF01835 MG2 domain NRZ29_13520 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ29_13520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRZ29_13525 PF00563 EAL domain NRZ29_13525 PF03707 Bacterial signalling protein N terminal repeat NRZ29_13525 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_13530 PF04055 Radical SAM superfamily NRZ29_13540 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_13545 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_13550 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ29_13555 PF00005 ABC transporter NRZ29_13560 PF03956 Lysine exporter LysO NRZ29_13565 PF01979 Amidohydrolase family NRZ29_13570 PF04336 Acyl carrier protein phosphodiesterase NRZ29_13585 PF03960 ArsC family NRZ29_13590 PF00578 AhpC/TSA family NRZ29_13595 PF13181 Tetratricopeptide repeat NRZ29_13595 PF01435 Peptidase family M48 NRZ29_13600 PF01206 Sulfurtransferase TusA NRZ29_13605 PF01594 AI-2E family transporter NRZ29_13615 PF00561 alpha/beta hydrolase fold NRZ29_13620 PF03976 Polyphosphate kinase 2 (PPK2) NRZ29_13625 PF00005 ABC transporter NRZ29_13625 PF08402 TOBE domain NRZ29_13630 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_13635 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_13635 PF14785 Maltose transport system permease protein MalF P2 domain NRZ29_13640 PF01547 Bacterial extracellular solute-binding protein NRZ29_13645 PF04245 37-kD nucleoid-associated bacterial protein NRZ29_13650 PF07208 Protein of unknown function (DUF1414) NRZ29_13655 PF11893 Domain of unknown function (DUF3413) NRZ29_13655 PF00884 Sulfatase NRZ29_13660 PF07715 TonB-dependent Receptor Plug Domain NRZ29_13660 PF00593 TonB dependent receptor NRZ29_13665 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NRZ29_13665 PF00326 Prolyl oligopeptidase family NRZ29_13685 PF03974 Ecotin NRZ29_13690 PF04219 Protein of unknown function, DUF NRZ29_13695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_13695 PF03466 LysR substrate binding domain NRZ29_13700 PF02153 Prephenate dehydrogenase NRZ29_13700 PF01817 Chorismate mutase type II NRZ29_13705 PF00793 DAHP synthetase I family NRZ29_13710 PF03009 Glycerophosphoryl diester phosphodiesterase family NRZ29_13715 PF01266 FAD dependent oxidoreductase NRZ29_13715 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NRZ29_13720 PF00455 DeoR C terminal sensor domain NRZ29_13720 PF08220 DeoR-like helix-turn-helix domain NRZ29_13725 PF07690 Major Facilitator Superfamily NRZ29_13730 PF00230 Major intrinsic protein NRZ29_13735 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NRZ29_13735 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NRZ29_13740 PF03466 LysR substrate binding domain NRZ29_13740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_13765 PF00248 Aldo/keto reductase family NRZ29_13770 PF07690 Major Facilitator Superfamily NRZ29_13780 PF02322 Cytochrome bd terminal oxidase subunit II NRZ29_13785 PF01654 Cytochrome bd terminal oxidase subunit I NRZ29_13790 PF00392 Bacterial regulatory proteins, gntR family NRZ29_13790 PF00155 Aminotransferase class I and II NRZ29_13800 PF04391 Protein of unknown function (DUF533) NRZ29_13815 PF10689 Protein of unknown function (DUF2496) NRZ29_13825 PF07690 Major Facilitator Superfamily NRZ29_13830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_13830 PF03466 LysR substrate binding domain NRZ29_13840 PF07690 Major Facilitator Superfamily NRZ29_13845 PF09102 Exotoxin A, targeting NRZ29_13845 PF09101 Exotoxin A binding NRZ29_13845 PF09009 Exotoxin A catalytic NRZ29_13850 PF01479 S4 domain NRZ29_13850 PF00849 RNA pseudouridylate synthase NRZ29_13855 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NRZ29_13855 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NRZ29_13880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NRZ29_13890 PF01844 HNH endonuclease NRZ29_13895 PF00300 Histidine phosphatase superfamily (branch 1) NRZ29_13905 PF03313 Serine dehydratase alpha chain NRZ29_13910 PF01042 Endoribonuclease L-PSP NRZ29_13920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_13920 PF00672 HAMP domain NRZ29_13935 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NRZ29_13935 PF17944 Arginine decarboxylase C-terminal helical extension NRZ29_13935 PF17810 Arginine decarboxylase helical bundle domain NRZ29_13945 PF07687 Peptidase dimerisation domain NRZ29_13945 PF01546 Peptidase family M20/M25/M40 NRZ29_13970 PF04264 YceI-like domain NRZ29_13975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_13975 PF03466 LysR substrate binding domain NRZ29_13985 PF01268 Formate--tetrahydrofolate ligase NRZ29_13990 PF00672 HAMP domain NRZ29_13990 PF17200 Single Cache domain 2 NRZ29_13990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_13995 PF01227 GTP cyclohydrolase I NRZ29_14000 PF00994 Probable molybdopterin binding domain NRZ29_14000 PF03454 MoeA C-terminal region (domain IV) NRZ29_14000 PF03453 MoeA N-terminal region (domain I and II) NRZ29_14005 PF00899 ThiF family NRZ29_14010 PF00561 alpha/beta hydrolase fold NRZ29_14015 PF00005 ABC transporter NRZ29_14015 PF03459 TOBE domain NRZ29_14020 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_14030 PF02391 MoaE protein NRZ29_14035 PF02597 ThiS family NRZ29_14040 PF01967 MoaC family NRZ29_14045 PF00994 Probable molybdopterin binding domain NRZ29_14050 PF03264 NapC/NirT cytochrome c family, N-terminal region NRZ29_14055 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) NRZ29_14060 PF13237 4Fe-4S dicluster domain NRZ29_14060 PF12801 4Fe-4S binding domain NRZ29_14065 PF12838 4Fe-4S dicluster domain NRZ29_14065 PF12800 4Fe-4S binding domain NRZ29_14070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NRZ29_14070 PF00384 Molybdopterin oxidoreductase NRZ29_14070 PF01568 Molydopterin dinucleotide binding domain NRZ29_14070 PF10518 TAT (twin-arginine translocation) pathway signal sequence NRZ29_14080 PF00037 4Fe-4S binding domain NRZ29_14080 PF13187 4Fe-4S dicluster domain NRZ29_14080 PF12800 4Fe-4S binding domain NRZ29_14085 PF04055 Radical SAM superfamily NRZ29_14085 PF06463 Molybdenum Cofactor Synthesis C NRZ29_14090 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NRZ29_14090 PF07730 Histidine kinase NRZ29_14090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_14090 PF00672 HAMP domain NRZ29_14095 PF00196 Bacterial regulatory proteins, luxR family NRZ29_14095 PF00072 Response regulator receiver domain NRZ29_14105 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_14105 PF09456 RcsC Alpha-Beta-Loop (ABL) NRZ29_14105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_14105 PF00072 Response regulator receiver domain NRZ29_14115 PF01933 Uncharacterised protein family UPF0052 NRZ29_14125 PF13230 Glutamine amidotransferases class-II NRZ29_14130 PF13580 SIS domain NRZ29_14135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NRZ29_14135 PF02770 Acyl-CoA dehydrogenase, middle domain NRZ29_14135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NRZ29_14135 PF09317 Domain of unknown function (DUF1974) NRZ29_14140 PF11849 Domain of unknown function (DUF3369) NRZ29_14150 PF00929 Exonuclease NRZ29_14155 PF00075 RNase H NRZ29_14160 PF08241 Methyltransferase domain NRZ29_14165 PF00753 Metallo-beta-lactamase superfamily NRZ29_14165 PF16123 Hydroxyacylglutathione hydrolase C-terminus NRZ29_14170 PF01476 LysM domain NRZ29_14170 PF01464 Transglycosylase SLT domain NRZ29_14175 PF03372 Endonuclease/Exonuclease/phosphatase family NRZ29_14185 PF03061 Thioesterase superfamily NRZ29_14195 PF00356 Bacterial regulatory proteins, lacI family NRZ29_14200 PF14718 Soluble lytic murein transglycosylase L domain NRZ29_14200 PF01464 Transglycosylase SLT domain NRZ29_14205 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_14205 PF00563 EAL domain NRZ29_14205 PF03707 Bacterial signalling protein N terminal repeat NRZ29_14210 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NRZ29_14230 PF04357 TamB, inner membrane protein subunit of TAM complex NRZ29_14235 PF01103 Surface antigen NRZ29_14235 PF07244 Surface antigen variable number repeat NRZ29_14235 PF17243 POTRA domain TamA domain 1 NRZ29_14250 PF01625 Peptide methionine sulfoxide reductase NRZ29_14260 PF02627 Carboxymuconolactone decarboxylase family NRZ29_14265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NRZ29_14265 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ29_14265 PF00403 Heavy-metal-associated domain NRZ29_14270 PF13416 Bacterial extracellular solute-binding protein NRZ29_14280 PF00005 ABC transporter NRZ29_14285 PF01066 CDP-alcohol phosphatidyltransferase NRZ29_14290 PF13406 Transglycosylase SLT domain NRZ29_14295 PF01047 MarR family NRZ29_14305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NRZ29_14305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NRZ29_14305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NRZ29_14305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NRZ29_14310 PF17206 SeqA protein N-terminal domain NRZ29_14310 PF03925 SeqA protein C-terminal domain NRZ29_14315 PF12697 Alpha/beta hydrolase family NRZ29_14325 PF01402 Ribbon-helix-helix protein, copG family NRZ29_14330 PF00258 Flavodoxin NRZ29_14340 PF01475 Ferric uptake regulator family NRZ29_14345 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NRZ29_14345 PF00749 tRNA synthetases class I (E and Q), catalytic domain NRZ29_14350 PF02838 Glycosyl hydrolase family 20, domain 2 NRZ29_14350 PF03173 Putative carbohydrate binding domain NRZ29_14350 PF00728 Glycosyl hydrolase family 20, catalytic domain NRZ29_14350 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain NRZ29_14355 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRZ29_14355 PF00367 phosphotransferase system, EIIB NRZ29_14355 PF02378 Phosphotransferase system, EIIC NRZ29_14360 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NRZ29_14365 PF01979 Amidohydrolase family NRZ29_14370 PF01047 MarR family NRZ29_14370 PF00480 ROK family NRZ29_14380 PF02719 Polysaccharide biosynthesis protein NRZ29_14385 PF00953 Glycosyl transferase family 4 NRZ29_14390 PF01370 NAD dependent epimerase/dehydratase family NRZ29_14405 PF02350 UDP-N-acetylglucosamine 2-epimerase NRZ29_14420 PF00005 ABC transporter NRZ29_14430 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NRZ29_14435 PF00483 Nucleotidyl transferase NRZ29_14440 PF04321 RmlD substrate binding domain NRZ29_14445 PF16363 GDP-mannose 4,6 dehydratase NRZ29_14450 PF02321 Outer membrane efflux protein NRZ29_14455 PF00873 AcrB/AcrD/AcrF family NRZ29_14460 PF00529 HlyD membrane-fusion protein of T1SS NRZ29_14460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ29_14465 PF08361 MAATS-type transcriptional repressor, C-terminal region NRZ29_14465 PF00440 Bacterial regulatory proteins, tetR family NRZ29_14485 PF00849 RNA pseudouridylate synthase NRZ29_14485 PF01479 S4 domain NRZ29_14490 PF04079 Segregation and condensation complex subunit ScpB NRZ29_14495 PF02616 Segregation and condensation protein ScpA NRZ29_14500 PF01300 Telomere recombination NRZ29_14505 PF02811 PHP domain NRZ29_14510 PF00425 chorismate binding enzyme NRZ29_14510 PF04715 Anthranilate synthase component I, N terminal region NRZ29_14515 PF00591 Glycosyl transferase family, a/b domain NRZ29_14515 PF02885 Glycosyl transferase family, helical bundle domain NRZ29_14515 PF00117 Glutamine amidotransferase class-I NRZ29_14520 PF02885 Glycosyl transferase family, helical bundle domain NRZ29_14520 PF00591 Glycosyl transferase family, a/b domain NRZ29_14525 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NRZ29_14525 PF00218 Indole-3-glycerol phosphate synthase NRZ29_14530 PF00291 Pyridoxal-phosphate dependent enzyme NRZ29_14535 PF00290 Tryptophan synthase alpha chain NRZ29_14555 PF04307 LexA-binding, inner membrane-associated putative hydrolase NRZ29_14575 PF01773 Na+ dependent nucleoside transporter N-terminus NRZ29_14575 PF07662 Na+ dependent nucleoside transporter C-terminus NRZ29_14575 PF07670 Nucleoside recognition NRZ29_14585 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NRZ29_14590 PF00005 ABC transporter NRZ29_14595 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_14600 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NRZ29_14610 PF07690 Major Facilitator Superfamily NRZ29_14615 PF01040 UbiA prenyltransferase family NRZ29_14620 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NRZ29_14625 PF00510 Cytochrome c oxidase subunit III NRZ29_14630 PF00115 Cytochrome C and Quinol oxidase polypeptide I NRZ29_14635 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NRZ29_14635 PF06481 COX Aromatic Rich Motif NRZ29_14645 PF00034 Cytochrome c NRZ29_14645 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NRZ29_14655 PF01156 Inosine-uridine preferring nucleoside hydrolase NRZ29_14670 PF00127 Copper binding proteins, plastocyanin/azurin family NRZ29_14675 PF02424 ApbE family NRZ29_14680 PF07690 Major Facilitator Superfamily NRZ29_14695 PF03372 Endonuclease/Exonuclease/phosphatase family NRZ29_14700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ29_14705 PF00873 AcrB/AcrD/AcrF family NRZ29_14715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ29_14715 PF00529 HlyD membrane-fusion protein of T1SS NRZ29_14720 PF00873 AcrB/AcrD/AcrF family NRZ29_14740 PF10437 Bacterial lipoate protein ligase C-terminus NRZ29_14740 PF03099 Biotin/lipoate A/B protein ligase family NRZ29_14745 PF03707 Bacterial signalling protein N terminal repeat NRZ29_14745 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_14745 PF00563 EAL domain NRZ29_14750 PF00873 AcrB/AcrD/AcrF family NRZ29_14765 PF04143 Sulphur transport NRZ29_14780 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ29_14790 PF02308 MgtC family NRZ29_14795 PF00356 Bacterial regulatory proteins, lacI family NRZ29_14795 PF13407 Periplasmic binding protein domain NRZ29_14800 PF00251 Glycosyl hydrolases family 32 N-terminal domain NRZ29_14800 PF08244 Glycosyl hydrolases family 32 C terminal NRZ29_14805 PF00367 phosphotransferase system, EIIB NRZ29_14805 PF02378 Phosphotransferase system, EIIC NRZ29_14810 PF00294 pfkB family carbohydrate kinase NRZ29_14815 PF02264 LamB porin NRZ29_14815 PF11471 Maltoporin periplasmic N-terminal extension NRZ29_14820 PF00684 DnaJ central domain NRZ29_14820 PF01556 DnaJ C terminal domain NRZ29_14820 PF00226 DnaJ domain NRZ29_14825 PF00012 Hsp70 protein NRZ29_14830 PF01025 GrpE NRZ29_14835 PF01513 ATP-NAD kinase NRZ29_14840 PF02463 RecF/RecN/SMC N terminal domain NRZ29_14845 PF01368 DHH family NRZ29_14845 PF02833 DHHA2 domain NRZ29_14855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ29_14860 PF02687 FtsX-like permease family NRZ29_14860 PF00005 ABC transporter NRZ29_14860 PF12704 MacB-like periplasmic core domain NRZ29_14865 PF02321 Outer membrane efflux protein NRZ29_14870 PF04954 Siderophore-interacting protein NRZ29_14870 PF08021 Siderophore-interacting FAD-binding domain NRZ29_14875 PF00793 DAHP synthetase I family NRZ29_14885 PF00816 H-NS histone family NRZ29_14910 PF01266 FAD dependent oxidoreductase NRZ29_14915 PF01381 Helix-turn-helix NRZ29_14915 PF07883 Cupin domain NRZ29_14920 PF00171 Aldehyde dehydrogenase family NRZ29_14925 PF00202 Aminotransferase class-III NRZ29_14935 PF00324 Amino acid permease NRZ29_14945 PF13520 Amino acid permease NRZ29_14955 PF02690 Na+/Pi-cotransporter NRZ29_14960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRZ29_14960 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NRZ29_14965 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NRZ29_14970 PF00072 Response regulator receiver domain NRZ29_14970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_14970 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_14970 PF01627 Hpt domain NRZ29_14970 PF00989 PAS fold NRZ29_14970 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ29_14990 PF01048 Phosphorylase superfamily NRZ29_15005 PF00005 ABC transporter NRZ29_15005 PF12848 ABC transporter NRZ29_15020 PF13474 SnoaL-like domain NRZ29_15025 PF00291 Pyridoxal-phosphate dependent enzyme NRZ29_15025 PF14821 Threonine synthase N terminus NRZ29_15030 PF00288 GHMP kinases N terminal domain NRZ29_15030 PF08544 GHMP kinases C terminal NRZ29_15035 PF01842 ACT domain NRZ29_15035 PF00696 Amino acid kinase family NRZ29_15035 PF13840 ACT domain NRZ29_15035 PF03447 Homoserine dehydrogenase, NAD binding domain NRZ29_15035 PF00742 Homoserine dehydrogenase NRZ29_15040 PF00588 SpoU rRNA Methylase family NRZ29_15045 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) NRZ29_15060 PF03737 Aldolase/RraA NRZ29_15070 PF00072 Response regulator receiver domain NRZ29_15070 PF00486 Transcriptional regulatory protein, C terminal NRZ29_15085 PF00664 ABC transporter transmembrane region NRZ29_15085 PF00005 ABC transporter NRZ29_15090 PF00005 ABC transporter NRZ29_15090 PF00664 ABC transporter transmembrane region NRZ29_15110 PF01980 tRNA-methyltransferase O NRZ29_15110 PF18389 TrmO C-terminal domain NRZ29_15115 PF00672 HAMP domain NRZ29_15115 PF01966 HD domain NRZ29_15120 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NRZ29_15120 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NRZ29_15130 PF00004 ATPase family associated with various cellular activities (AAA) NRZ29_15130 PF07724 AAA domain (Cdc48 subfamily) NRZ29_15130 PF02861 Clp amino terminal domain, pathogenicity island component NRZ29_15130 PF10431 C-terminal, D2-small domain, of ClpB protein NRZ29_15130 PF17871 AAA lid domain NRZ29_15135 PF00291 Pyridoxal-phosphate dependent enzyme NRZ29_15140 PF00381 PTS HPr component phosphorylation site NRZ29_15145 PF02896 PEP-utilising enzyme, TIM barrel domain NRZ29_15145 PF00391 PEP-utilising enzyme, mobile domain NRZ29_15145 PF05524 PEP-utilising enzyme, N-terminal NRZ29_15150 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRZ29_15155 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_15165 PF01292 Prokaryotic cytochrome b561 NRZ29_15175 PF13476 AAA domain NRZ29_15180 PF00149 Calcineurin-like phosphoesterase NRZ29_15180 PF12320 Type 5 capsule protein repressor C-terminal domain NRZ29_15190 PF04381 Putative exonuclease, RdgC NRZ29_15200 PF02254 TrkA-N domain NRZ29_15200 PF00999 Sodium/hydrogen exchanger family NRZ29_15205 PF04389 Peptidase family M28 NRZ29_15205 PF04151 Bacterial pre-peptidase C-terminal domain NRZ29_15215 PF00224 Pyruvate kinase, barrel domain NRZ29_15215 PF02887 Pyruvate kinase, alpha/beta domain NRZ29_15220 PF00924 Mechanosensitive ion channel NRZ29_15220 PF12794 Mechanosensitive ion channel inner membrane domain 1 NRZ29_15220 PF12795 Mechanosensitive ion channel porin domain NRZ29_15230 PF10282 Lactonase, 7-bladed beta-propeller NRZ29_15235 PF00860 Permease family NRZ29_15240 PF01458 Uncharacterized protein family (UPF0051) NRZ29_15245 PF05433 Glycine zipper 2TM domain NRZ29_15245 PF16998 17 kDa outer membrane surface antigen NRZ29_15250 PF03949 Malic enzyme, NAD binding domain NRZ29_15250 PF00390 Malic enzyme, N-terminal domain NRZ29_15255 PF00072 Response regulator receiver domain NRZ29_15265 PF13247 4Fe-4S dicluster domain NRZ29_15270 PF01568 Molydopterin dinucleotide binding domain NRZ29_15270 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NRZ29_15270 PF00384 Molybdopterin oxidoreductase NRZ29_15270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NRZ29_15270 PF12838 4Fe-4S dicluster domain NRZ29_15270 PF00384 Molybdopterin oxidoreductase NRZ29_15270 PF01568 Molydopterin dinucleotide binding domain NRZ29_15270 PF12838 4Fe-4S dicluster domain NRZ29_15270 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NRZ29_15270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NRZ29_15305 PF02634 FdhD/NarQ family NRZ29_15310 PF12728 Helix-turn-helix domain NRZ29_15310 PF12727 PBP superfamily domain NRZ29_15315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_15315 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_15315 PF00989 PAS fold NRZ29_15320 PF02954 Bacterial regulatory protein, Fis family NRZ29_15320 PF00072 Response regulator receiver domain NRZ29_15320 PF00158 Sigma-54 interaction domain NRZ29_15325 PF12849 PBP superfamily domain NRZ29_15330 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_15335 PF00005 ABC transporter NRZ29_15340 PF12804 MobA-like NTP transferase domain NRZ29_15345 PF00994 Probable molybdopterin binding domain NRZ29_15345 PF03454 MoeA C-terminal region (domain IV) NRZ29_15345 PF03453 MoeA N-terminal region (domain I and II) NRZ29_15350 PF04632 Fusaric acid resistance protein family NRZ29_15365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_15365 PF08447 PAS fold NRZ29_15365 PF13426 PAS domain NRZ29_15390 PF05114 Protein of unknown function (DUF692) NRZ29_15400 PF10725 Protein of unknown function (DUF2517) NRZ29_15420 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_15420 PF00072 Response regulator receiver domain NRZ29_15420 PF09308 LuxQ, periplasmic NRZ29_15420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_15425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ29_15430 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_15435 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_15435 PF12911 N-terminal TM domain of oligopeptide transport permease C NRZ29_15440 PF00005 ABC transporter NRZ29_15440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRZ29_15445 PF00005 ABC transporter NRZ29_15445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRZ29_15455 PF01869 BadF/BadG/BcrA/BcrD ATPase family NRZ29_15460 PF02838 Glycosyl hydrolase family 20, domain 2 NRZ29_15460 PF00728 Glycosyl hydrolase family 20, catalytic domain NRZ29_15465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_15465 PF08447 PAS fold NRZ29_15480 PF01396 Topoisomerase DNA binding C4 zinc finger NRZ29_15480 PF01751 Toprim domain NRZ29_15480 PF01131 DNA topoisomerase NRZ29_15480 PF08272 Topoisomerase I zinc-ribbon-like NRZ29_15485 PF04996 Succinylarginine dihydrolase NRZ29_15490 PF01343 Peptidase family S49 NRZ29_15490 PF08496 Peptidase family S49 N-terminal NRZ29_15495 PF00106 short chain dehydrogenase NRZ29_15500 PF03466 LysR substrate binding domain NRZ29_15500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_15505 PF07690 Major Facilitator Superfamily NRZ29_15510 PF00155 Aminotransferase class I and II NRZ29_15520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_15520 PF03466 LysR substrate binding domain NRZ29_15525 PF00709 Adenylosuccinate synthetase NRZ29_15530 PF01161 Phosphatidylethanolamine-binding protein NRZ29_15540 PF01204 Trehalase NRZ29_15545 PF00579 tRNA synthetases class I (W and Y) NRZ29_15550 PF01476 LysM domain NRZ29_15550 PF08525 Opacity-associated protein A N-terminal motif NRZ29_15550 PF01551 Peptidase family M23 NRZ29_15555 PF03702 Anhydro-N-acetylmuramic acid kinase NRZ29_15560 PF01965 DJ-1/PfpI family NRZ29_15565 PF01042 Endoribonuclease L-PSP NRZ29_15575 PF00456 Transketolase, thiamine diphosphate binding domain NRZ29_15575 PF02780 Transketolase, C-terminal domain NRZ29_15575 PF02779 Transketolase, pyrimidine binding domain NRZ29_15580 PF02773 S-adenosylmethionine synthetase, C-terminal domain NRZ29_15580 PF02772 S-adenosylmethionine synthetase, central domain NRZ29_15580 PF00438 S-adenosylmethionine synthetase, N-terminal domain NRZ29_15585 PF10263 SprT-like family NRZ29_15585 PF17283 SprT-like zinc ribbon domain NRZ29_15590 PF04231 Endonuclease I NRZ29_15595 PF04452 RNA methyltransferase NRZ29_15600 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NRZ29_15600 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NRZ29_15605 PF00672 HAMP domain NRZ29_15605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_15605 PF12729 Four helix bundle sensory module for signal transduction NRZ29_15610 PF02622 Uncharacterized ACR, COG1678 NRZ29_15615 PF03652 Holliday junction resolvase NRZ29_15620 PF00854 POT family NRZ29_15625 PF00144 Beta-lactamase NRZ29_15630 PF07726 ATPase family associated with various cellular activities (AAA) NRZ29_15630 PF17863 AAA lid domain NRZ29_15640 PF11992 Domain of unknown function (DUF3488) NRZ29_15640 PF13559 Domain of unknown function (DUF4129) NRZ29_15640 PF01841 Transglutaminase-like superfamily NRZ29_15645 PF01235 Sodium:alanine symporter family NRZ29_15650 PF00923 Transaldolase/Fructose-6-phosphate aldolase NRZ29_15665 PF03167 Uracil DNA glycosylase superfamily NRZ29_15670 PF01228 Glycine radical NRZ29_15675 PF00375 Sodium:dicarboxylate symporter family NRZ29_15680 PF00793 DAHP synthetase I family NRZ29_15685 PF13369 Transglutaminase-like superfamily NRZ29_15695 PF13847 Methyltransferase domain NRZ29_15695 PF17827 PrmC N-terminal domain NRZ29_15700 PF03462 PCRF domain NRZ29_15700 PF00472 RF-1 domain NRZ29_15705 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NRZ29_15705 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NRZ29_15705 PF01488 Shikimate / quinate 5-dehydrogenase NRZ29_15710 PF03550 Outer membrane lipoprotein LolB NRZ29_15715 PF08544 GHMP kinases C terminal NRZ29_15715 PF00288 GHMP kinases N terminal domain NRZ29_15725 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NRZ29_15725 PF14572 Phosphoribosyl synthetase-associated domain NRZ29_15730 PF02872 5'-nucleotidase, C-terminal domain NRZ29_15730 PF00149 Calcineurin-like phosphoesterase NRZ29_15735 PF01195 Peptidyl-tRNA hydrolase NRZ29_15740 PF06071 Protein of unknown function (DUF933) NRZ29_15740 PF01926 50S ribosome-binding GTPase NRZ29_15785 PF03600 Citrate transporter NRZ29_15785 PF02080 TrkA-C domain NRZ29_15790 PF04973 Nicotinamide mononucleotide transporter NRZ29_15795 PF01048 Phosphorylase superfamily NRZ29_15805 PF04266 ASCH domain NRZ29_15815 PF11941 Domain of unknown function (DUF3459) NRZ29_15815 PF00128 Alpha amylase, catalytic domain NRZ29_15825 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NRZ29_15825 PF10371 Domain of unknown function NRZ29_15825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRZ29_15825 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NRZ29_15825 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NRZ29_15830 PF07690 Major Facilitator Superfamily NRZ29_15835 PF13419 Haloacid dehalogenase-like hydrolase NRZ29_15845 PF00171 Aldehyde dehydrogenase family NRZ29_15850 PF04958 Arginine N-succinyltransferase beta subunit NRZ29_15855 PF00202 Aminotransferase class-III NRZ29_15860 PF00117 Glutamine amidotransferase class-I NRZ29_15870 PF00579 tRNA synthetases class I (W and Y) NRZ29_15875 PF13419 Haloacid dehalogenase-like hydrolase NRZ29_15880 PF00834 Ribulose-phosphate 3 epimerase family NRZ29_15890 PF02086 D12 class N6 adenine-specific DNA methyltransferase NRZ29_15900 PF01761 3-dehydroquinate synthase NRZ29_15905 PF01202 Shikimate kinase NRZ29_15910 PF00263 Bacterial type II and III secretion system protein NRZ29_15910 PF03958 Bacterial type II/III secretion system short domain NRZ29_15910 PF11741 AMIN domain NRZ29_15910 PF07660 Secretin and TonB N terminus short domain NRZ29_15920 PF04350 Pilus assembly protein, PilO NRZ29_15930 PF11104 Type IV pilus assembly protein PilM; NRZ29_15935 PF17092 Penicillin-binding protein OB-like domain NRZ29_15935 PF00912 Transglycosylase NRZ29_15935 PF00905 Penicillin binding protein transpeptidase domain NRZ29_15940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_15940 PF03466 LysR substrate binding domain NRZ29_15945 PF00672 HAMP domain NRZ29_15945 PF16591 Helical bimodular sensor domain NRZ29_15945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_15960 PF03466 LysR substrate binding domain NRZ29_15960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_15975 PF01476 LysM domain NRZ29_15975 PF08525 Opacity-associated protein A N-terminal motif NRZ29_15975 PF01551 Peptidase family M23 NRZ29_15985 PF12794 Mechanosensitive ion channel inner membrane domain 1 NRZ29_15985 PF12795 Mechanosensitive ion channel porin domain NRZ29_15985 PF00924 Mechanosensitive ion channel NRZ29_15990 PF03009 Glycerophosphoryl diester phosphodiesterase family NRZ29_15995 PF00672 HAMP domain NRZ29_15995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_15995 PF02743 Cache domain NRZ29_16000 PF00890 FAD binding domain NRZ29_16000 PF02910 Fumarate reductase flavoprotein C-term NRZ29_16005 PF13183 4Fe-4S dicluster domain NRZ29_16005 PF13085 2Fe-2S iron-sulfur cluster binding domain NRZ29_16010 PF02300 Fumarate reductase subunit C NRZ29_16015 PF02313 Fumarate reductase subunit D NRZ29_16035 PF06224 Winged helix DNA-binding domain NRZ29_16040 PF13649 Methyltransferase domain NRZ29_16050 PF00501 AMP-binding enzyme NRZ29_16070 PF00072 Response regulator receiver domain NRZ29_16070 PF00486 Transcriptional regulatory protein, C terminal NRZ29_16075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_16075 PF08521 Two-component sensor kinase N-terminal NRZ29_16075 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_16085 PF00478 IMP dehydrogenase / GMP reductase domain NRZ29_16095 PF01132 Elongation factor P (EF-P) OB domain NRZ29_16095 PF08207 Elongation factor P (EF-P) KOW-like domain NRZ29_16095 PF09285 Elongation factor P, C-terminal NRZ29_16100 PF09997 Predicted membrane protein (DUF2238) NRZ29_16110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRZ29_16110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRZ29_16120 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_16130 PF13419 Haloacid dehalogenase-like hydrolase NRZ29_16140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_16140 PF03466 LysR substrate binding domain NRZ29_16145 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_16145 PF05230 MASE2 domain NRZ29_16150 PF00313 'Cold-shock' DNA-binding domain NRZ29_16155 PF00857 Isochorismatase family NRZ29_16160 PF01494 FAD binding domain NRZ29_16165 PF04055 Radical SAM superfamily NRZ29_16165 PF01938 TRAM domain NRZ29_16165 PF00919 Uncharacterized protein family UPF0004 NRZ29_16170 PF02562 PhoH-like protein NRZ29_16175 PF02130 Uncharacterized protein family UPF0054 NRZ29_16180 PF00571 CBS domain NRZ29_16180 PF03471 Transporter associated domain NRZ29_16185 PF00795 Carbon-nitrogen hydrolase NRZ29_16190 PF07295 Zinc-ribbon containing domain NRZ29_16195 PF08264 Anticodon-binding domain of tRNA NRZ29_16195 PF00133 tRNA synthetases class I (I, L, M and V) NRZ29_16195 PF13603 Leucyl-tRNA synthetase, Domain 2 NRZ29_16210 PF01467 Cytidylyltransferase-like NRZ29_16220 PF02590 Predicted SPOUT methyltransferase NRZ29_16225 PF03717 Penicillin-binding Protein dimerisation domain NRZ29_16225 PF00905 Penicillin binding protein transpeptidase domain NRZ29_16230 PF01098 Cell cycle protein NRZ29_16235 PF13406 Transglycosylase SLT domain NRZ29_16240 PF05036 Sporulation related domain NRZ29_16240 PF03330 Lytic transglycolase NRZ29_16245 PF07943 Penicillin-binding protein 5, C-terminal domain NRZ29_16245 PF00768 D-alanyl-D-alanine carboxypeptidase NRZ29_16250 PF04359 Protein of unknown function (DUF493) NRZ29_16255 PF03099 Biotin/lipoate A/B protein ligase family NRZ29_16260 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NRZ29_16260 PF04055 Radical SAM superfamily NRZ29_16270 PF06821 Serine hydrolase NRZ29_16275 PF02508 Rnf-Nqr subunit, membrane protein NRZ29_16285 PF00583 Acetyltransferase (GNAT) family NRZ29_16290 PF13411 MerR HTH family regulatory protein NRZ29_16295 PF01368 DHH family NRZ29_16295 PF02272 DHHA1 domain NRZ29_16295 PF17768 RecJ OB domain NRZ29_16300 PF13098 Thioredoxin-like domain NRZ29_16300 PF10411 Disulfide bond isomerase protein N-terminus NRZ29_16305 PF01741 Large-conductance mechanosensitive channel, MscL NRZ29_16310 PF00589 Phage integrase family NRZ29_16310 PF02899 Phage integrase, N-terminal SAM-like domain NRZ29_16315 PF00258 Flavodoxin NRZ29_16320 PF01523 Putative modulator of DNA gyrase NRZ29_16325 PF01523 Putative modulator of DNA gyrase NRZ29_16335 PF17969 L,D-transpeptidase C-terminal domain NRZ29_16335 PF03734 L,D-transpeptidase catalytic domain NRZ29_16340 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NRZ29_16345 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NRZ29_16365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NRZ29_16365 PF00384 Molybdopterin oxidoreductase NRZ29_16365 PF01568 Molydopterin dinucleotide binding domain NRZ29_16370 PF03916 Polysulphide reductase, NrfD NRZ29_16375 PF13247 4Fe-4S dicluster domain NRZ29_16380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_16380 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_16380 PF00989 PAS fold NRZ29_16385 PF00196 Bacterial regulatory proteins, luxR family NRZ29_16385 PF00072 Response regulator receiver domain NRZ29_16390 PF07694 5TMR of 5TMR-LYT NRZ29_16390 PF06580 Histidine kinase NRZ29_16395 PF04397 LytTr DNA-binding domain NRZ29_16395 PF00072 Response regulator receiver domain NRZ29_16400 PF13722 5TM C-terminal transporter carbon starvation CstA NRZ29_16400 PF02554 Carbon starvation protein CstA NRZ29_16405 PF03575 Peptidase family S51 NRZ29_16410 PF10415 Fumarase C C-terminus NRZ29_16410 PF00206 Lyase NRZ29_16420 PF02635 DsrE/DsrF-like family NRZ29_16425 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_16430 PF07690 Major Facilitator Superfamily NRZ29_16435 PF00575 S1 RNA binding domain NRZ29_16435 PF03725 3' exoribonuclease family, domain 2 NRZ29_16435 PF01138 3' exoribonuclease family, domain 1 NRZ29_16435 PF00013 KH domain NRZ29_16435 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NRZ29_16440 PF00312 Ribosomal protein S15 NRZ29_16445 PF09157 Pseudouridine synthase II TruB, C-terminal NRZ29_16445 PF01509 TruB family pseudouridylate synthase (N terminal domain) NRZ29_16445 PF16198 tRNA pseudouridylate synthase B C-terminal domain NRZ29_16450 PF02033 Ribosome-binding factor A NRZ29_16455 PF11987 Translation-initiation factor 2 NRZ29_16455 PF08364 Bacterial translation initiation factor IF-2 associated region NRZ29_16455 PF00009 Elongation factor Tu GTP binding domain NRZ29_16455 PF04760 Translation initiation factor IF-2, N-terminal region NRZ29_16460 PF13184 NusA-like KH domain NRZ29_16460 PF08529 NusA N-terminal domain NRZ29_16460 PF00575 S1 RNA binding domain NRZ29_16465 PF02576 RimP N-terminal domain NRZ29_16465 PF17384 RimP C-terminal SH3 domain NRZ29_16480 PF03840 Preprotein translocase SecG subunit NRZ29_16485 PF00121 Triosephosphate isomerase NRZ29_16490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NRZ29_16490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NRZ29_16490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NRZ29_16490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NRZ29_16495 PF00809 Pterin binding enzyme NRZ29_16500 PF01434 Peptidase family M41 NRZ29_16500 PF17862 AAA+ lid domain NRZ29_16500 PF06480 FtsH Extracellular NRZ29_16500 PF00004 ATPase family associated with various cellular activities (AAA) NRZ29_16505 PF01728 FtsJ-like methyltransferase NRZ29_16510 PF01985 CRS1 / YhbY (CRM) domain NRZ29_16520 PF01272 Transcription elongation factor, GreA/GreB, C-term NRZ29_16520 PF03449 Transcription elongation factor, N-terminal NRZ29_16525 PF13677 Membrane MotB of proton-channel complex MotA/MotB NRZ29_16525 PF00691 OmpA family NRZ29_16530 PF01618 MotA/TolQ/ExbB proton channel family NRZ29_16535 PF02609 Exonuclease VII small subunit NRZ29_16540 PF00348 Polyprenyl synthetase NRZ29_16545 PF02780 Transketolase, C-terminal domain NRZ29_16545 PF02779 Transketolase, pyrimidine binding domain NRZ29_16545 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NRZ29_16550 PF12911 N-terminal TM domain of oligopeptide transport permease C NRZ29_16550 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_16555 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_16560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ29_16565 PF00005 ABC transporter NRZ29_16565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRZ29_16570 PF04608 Phosphatidylglycerophosphatase A NRZ29_16575 PF02769 AIR synthase related protein, C-terminal domain NRZ29_16575 PF00586 AIR synthase related protein, N-terminal domain NRZ29_16580 PF01029 NusB family NRZ29_16585 PF00885 6,7-dimethyl-8-ribityllumazine synthase NRZ29_16595 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NRZ29_16595 PF00925 GTP cyclohydrolase II NRZ29_16600 PF00677 Lumazine binding domain NRZ29_16605 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NRZ29_16605 PF01872 RibD C-terminal domain NRZ29_16610 PF03477 ATP cone domain NRZ29_16625 PF00464 Serine hydroxymethyltransferase NRZ29_16640 PF02613 Nitrate reductase delta subunit NRZ29_16660 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_16660 PF00563 EAL domain NRZ29_16660 PF13188 PAS domain NRZ29_16660 PF03707 Bacterial signalling protein N terminal repeat NRZ29_16670 PF13193 AMP-binding enzyme C-terminal domain NRZ29_16670 PF00501 AMP-binding enzyme NRZ29_16670 PF16177 Acetyl-coenzyme A synthetase N-terminus NRZ29_16675 PF01220 Dehydroquinase class II NRZ29_16680 PF00364 Biotin-requiring enzyme NRZ29_16685 PF02785 Biotin carboxylase C-terminal domain NRZ29_16685 PF00289 Biotin carboxylase, N-terminal domain NRZ29_16685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NRZ29_16695 PF00474 Sodium:solute symporter family NRZ29_16700 PF02378 Phosphotransferase system, EIIC NRZ29_16700 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NRZ29_16700 PF00367 phosphotransferase system, EIIB NRZ29_16705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_16705 PF03466 LysR substrate binding domain NRZ29_16710 PF00107 Zinc-binding dehydrogenase NRZ29_16710 PF08240 Alcohol dehydrogenase GroES-like domain NRZ29_16720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NRZ29_16720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NRZ29_16720 PF01842 ACT domain NRZ29_16725 PF14602 Hexapeptide repeat of succinyl-transferase NRZ29_16725 PF12464 Maltose acetyltransferase NRZ29_16740 PF00881 Nitroreductase family NRZ29_16745 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NRZ29_16745 PF07992 Pyridine nucleotide-disulphide oxidoreductase NRZ29_16750 PF01343 Peptidase family S49 NRZ29_16765 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NRZ29_16765 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NRZ29_16770 PF07023 Protein of unknown function (DUF1315) NRZ29_16775 PF17763 Glutaminase/Asparaginase C-terminal domain NRZ29_16775 PF00710 Asparaginase, N-terminal NRZ29_16780 PF03616 Sodium/glutamate symporter NRZ29_16785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_16785 PF02743 Cache domain NRZ29_16785 PF00672 HAMP domain NRZ29_16795 PF00152 tRNA synthetases class II (D, K and N) NRZ29_16795 PF01336 OB-fold nucleic acid binding domain NRZ29_16800 PF02567 Phenazine biosynthesis-like protein NRZ29_16805 PF00667 FAD binding domain NRZ29_16805 PF00175 Oxidoreductase NAD-binding domain NRZ29_16805 PF00258 Flavodoxin NRZ29_16810 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NRZ29_16810 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NRZ29_16815 PF01507 Phosphoadenosine phosphosulfate reductase family NRZ29_16820 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NRZ29_16825 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_16830 PF00571 CBS domain NRZ29_16830 PF00005 ABC transporter NRZ29_16835 PF00186 Dihydrofolate reductase NRZ29_16840 PF12821 Threonine/Serine exporter, ThrE NRZ29_16845 PF06738 Putative threonine/serine exporter NRZ29_16855 PF00994 Probable molybdopterin binding domain NRZ29_16865 PF00109 Beta-ketoacyl synthase, N-terminal domain NRZ29_16865 PF02801 Beta-ketoacyl synthase, C-terminal domain NRZ29_16880 PF00109 Beta-ketoacyl synthase, N-terminal domain NRZ29_16880 PF02801 Beta-ketoacyl synthase, C-terminal domain NRZ29_16905 PF00221 Aromatic amino acid lyase NRZ29_16915 PF07977 FabA-like domain NRZ29_16920 PF13193 AMP-binding enzyme C-terminal domain NRZ29_16920 PF00501 AMP-binding enzyme NRZ29_16930 PF00550 Phosphopantetheine attachment site NRZ29_16935 PF00550 Phosphopantetheine attachment site NRZ29_16970 PF03150 Di-haem cytochrome c peroxidase NRZ29_16970 PF00034 Cytochrome c NRZ29_16975 PF00194 Eukaryotic-type carbonic anhydrase NRZ29_16980 PF04227 Indigoidine synthase A like protein NRZ29_16985 PF00294 pfkB family carbohydrate kinase NRZ29_17010 PF00582 Universal stress protein family NRZ29_17020 PF00171 Aldehyde dehydrogenase family NRZ29_17025 PF00696 Amino acid kinase family NRZ29_17025 PF01472 PUA domain NRZ29_17030 PF07417 Sigma factor-binding transcriptional regulator Crl NRZ29_17035 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) NRZ29_17040 PF00156 Phosphoribosyl transferase domain NRZ29_17045 PF07687 Peptidase dimerisation domain NRZ29_17045 PF01546 Peptidase family M20/M25/M40 NRZ29_17050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRZ29_17050 PF00005 ABC transporter NRZ29_17055 PF00005 ABC transporter NRZ29_17055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NRZ29_17065 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_17065 PF12911 N-terminal TM domain of oligopeptide transport permease C NRZ29_17070 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_17075 PF07715 TonB-dependent Receptor Plug Domain NRZ29_17075 PF00593 TonB dependent receptor NRZ29_17085 PF01618 MotA/TolQ/ExbB proton channel family NRZ29_17090 PF01618 MotA/TolQ/ExbB proton channel family NRZ29_17095 PF02472 Biopolymer transport protein ExbD/TolR NRZ29_17110 PF06483 Chitinase C NRZ29_17110 PF00704 Glycosyl hydrolases family 18 NRZ29_17145 PF00749 tRNA synthetases class I (E and Q), catalytic domain NRZ29_17150 PF00749 tRNA synthetases class I (E and Q), catalytic domain NRZ29_17155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_17155 PF00672 HAMP domain NRZ29_17165 PF00313 'Cold-shock' DNA-binding domain NRZ29_17200 PF00929 Exonuclease NRZ29_17205 PF03193 RsgA GTPase NRZ29_17210 PF02666 Phosphatidylserine decarboxylase NRZ29_17215 PF09905 DNA-binding protein VF530 NRZ29_17235 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_17235 PF03707 Bacterial signalling protein N terminal repeat NRZ29_17235 PF00563 EAL domain NRZ29_17240 PF06877 Regulator of ribonuclease activity B NRZ29_17245 PF05547 Immune inhibitor A peptidase M6 NRZ29_17245 PF00801 PKD domain NRZ29_17265 PF00561 alpha/beta hydrolase fold NRZ29_17270 PF00664 ABC transporter transmembrane region NRZ29_17270 PF00005 ABC transporter NRZ29_17275 PF06004 Bacterial protein of unknown function (DUF903) NRZ29_17280 PF00581 Rhodanese-like domain NRZ29_17285 PF04960 Glutaminase NRZ29_17290 PF04320 Protein with unknown function (DUF469) NRZ29_17295 PF02390 Putative methyltransferase NRZ29_17300 PF01483 Proprotein convertase P-domain NRZ29_17300 PF04389 Peptidase family M28 NRZ29_17305 PF00155 Aminotransferase class I and II NRZ29_17310 PF12792 CSS motif domain associated with EAL NRZ29_17310 PF00563 EAL domain NRZ29_17315 PF08338 Domain of unknown function (DUF1731) NRZ29_17315 PF01370 NAD dependent epimerase/dehydratase family NRZ29_17325 PF00005 ABC transporter NRZ29_17330 PF13472 GDSL-like Lipase/Acylhydrolase family NRZ29_17335 PF00072 Response regulator receiver domain NRZ29_17335 PF01584 CheW-like domain NRZ29_17355 PF02080 TrkA-C domain NRZ29_17355 PF06826 Predicted Permease Membrane Region NRZ29_17360 PF03006 Haemolysin-III related NRZ29_17365 PF00282 Pyridoxal-dependent decarboxylase conserved domain NRZ29_17370 PF04279 Intracellular septation protein A NRZ29_17375 PF03795 YCII-related domain NRZ29_17380 PF00459 Inositol monophosphatase family NRZ29_17390 PF00483 Nucleotidyl transferase NRZ29_17395 PF00854 POT family NRZ29_17400 PF00072 Response regulator receiver domain NRZ29_17430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ29_17435 PF02321 Outer membrane efflux protein NRZ29_17440 PF01207 Dihydrouridine synthase (Dus) NRZ29_17445 PF02954 Bacterial regulatory protein, Fis family NRZ29_17450 PF01810 LysE type translocator NRZ29_17475 PF12137 RNA polymerase recycling family C-terminal NRZ29_17475 PF00271 Helicase conserved C-terminal domain NRZ29_17475 PF18337 RapA N-terminal Tudor like domain NRZ29_17475 PF18339 RapA N-terminal Tudor like domain 1 NRZ29_17475 PF00176 SNF2 family N-terminal domain NRZ29_17480 PF00849 RNA pseudouridylate synthase NRZ29_17490 PF03707 Bacterial signalling protein N terminal repeat NRZ29_17490 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_17490 PF00563 EAL domain NRZ29_17490 PF13188 PAS domain NRZ29_17500 PF00118 TCP-1/cpn60 chaperonin family NRZ29_17505 PF00166 Chaperonin 10 Kd subunit NRZ29_17510 PF01554 MatE NRZ29_17515 PF04186 FxsA cytoplasmic membrane protein NRZ29_17520 PF10415 Fumarase C C-terminus NRZ29_17520 PF00206 Lyase NRZ29_17525 PF03605 Anaerobic c4-dicarboxylate membrane transporter NRZ29_17530 PF00267 Gram-negative porin NRZ29_17535 PF07690 Major Facilitator Superfamily NRZ29_17540 PF03466 LysR substrate binding domain NRZ29_17540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_17545 PF03413 Peptidase propeptide and YPEB domain NRZ29_17545 PF07504 Fungalysin/Thermolysin Propeptide Motif NRZ29_17545 PF02868 Thermolysin metallopeptidase, alpha-helical domain NRZ29_17545 PF04151 Bacterial pre-peptidase C-terminal domain NRZ29_17545 PF01447 Thermolysin metallopeptidase, catalytic domain NRZ29_17550 PF13302 Acetyltransferase (GNAT) domain NRZ29_17555 PF13302 Acetyltransferase (GNAT) domain NRZ29_17565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NRZ29_17565 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NRZ29_17570 PF07690 Major Facilitator Superfamily NRZ29_17575 PF01725 Ham1 family NRZ29_17580 PF04055 Radical SAM superfamily NRZ29_17580 PF06969 HemN C-terminal domain NRZ29_17585 PF03889 Alternative ribosome-rescue factor A NRZ29_17590 PF01872 RibD C-terminal domain NRZ29_17595 PF13411 MerR HTH family regulatory protein NRZ29_17600 PF01808 AICARFT/IMPCHase bienzyme NRZ29_17600 PF02142 MGS-like domain NRZ29_17605 PF02844 Phosphoribosylglycinamide synthetase, N domain NRZ29_17605 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NRZ29_17605 PF02843 Phosphoribosylglycinamide synthetase, C domain NRZ29_17620 PF00128 Alpha amylase, catalytic domain NRZ29_17630 PF03979 Sigma-70 factor, region 1.1 NRZ29_17630 PF00140 Sigma-70 factor, region 1.2 NRZ29_17630 PF04542 Sigma-70 region 2 NRZ29_17630 PF04539 Sigma-70 region 3 NRZ29_17630 PF04545 Sigma-70, region 4 NRZ29_17630 PF04546 Sigma-70, non-essential region NRZ29_17635 PF01807 CHC2 zinc finger NRZ29_17635 PF10410 DnaB-helicase binding domain of primase NRZ29_17635 PF08278 DNA primase DnaG DnaB-binding NRZ29_17635 PF08275 DNA primase catalytic core, N-terminal domain NRZ29_17640 PF09424 Yqey-like protein NRZ29_17645 PF01165 Ribosomal protein S21 NRZ29_17650 PF00814 Glycoprotease family NRZ29_17655 PF04545 Sigma-70, region 4 NRZ29_17655 PF00140 Sigma-70 factor, region 1.2 NRZ29_17655 PF04542 Sigma-70 region 2 NRZ29_17655 PF04539 Sigma-70 region 3 NRZ29_17660 PF01476 LysM domain NRZ29_17660 PF01551 Peptidase family M23 NRZ29_17665 PF09335 SNARE associated Golgi protein NRZ29_17675 PF01975 Survival protein SurE NRZ29_17680 PF01142 tRNA pseudouridine synthase D (TruD) NRZ29_17685 PF02542 YgbB family NRZ29_17690 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NRZ29_17695 PF04977 Septum formation initiator NRZ29_17700 PF00113 Enolase, C-terminal TIM barrel domain NRZ29_17700 PF03952 Enolase, N-terminal domain NRZ29_17705 PF00117 Glutamine amidotransferase class-I NRZ29_17705 PF06418 CTP synthase N-terminus NRZ29_17710 PF03819 MazG nucleotide pyrophosphohydrolase domain NRZ29_17715 PF04607 Region found in RelA / SpoT proteins NRZ29_17715 PF02824 TGS domain NRZ29_17715 PF13291 ACT domain NRZ29_17720 PF01938 TRAM domain NRZ29_17720 PF05958 tRNA (Uracil-5-)-methyltransferase NRZ29_17725 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NRZ29_17725 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_17725 PF01627 Hpt domain NRZ29_17725 PF00072 Response regulator receiver domain NRZ29_17725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_17725 PF00672 HAMP domain NRZ29_17730 PF07308 Protein of unknown function (DUF1456) NRZ29_17735 PF01510 N-acetylmuramoyl-L-alanine amidase NRZ29_17740 PF08220 DeoR-like helix-turn-helix domain NRZ29_17740 PF00455 DeoR C terminal sensor domain NRZ29_17745 PF08013 Tagatose 6 phosphate kinase NRZ29_17750 PF01380 SIS domain NRZ29_17755 PF03830 PTS system sorbose subfamily IIB component NRZ29_17760 PF03609 PTS system sorbose-specific iic component NRZ29_17765 PF03613 PTS system mannose/fructose/sorbose family IID component NRZ29_17770 PF03610 PTS system fructose IIA component NRZ29_17775 PF01979 Amidohydrolase family NRZ29_17780 PF01116 Fructose-bisphosphate aldolase class-II NRZ29_17790 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NRZ29_17795 PF02565 Recombination protein O C terminal NRZ29_17795 PF11967 Recombination protein O N terminal NRZ29_17800 PF07650 KH domain NRZ29_17800 PF01926 50S ribosome-binding GTPase NRZ29_17805 PF14622 Ribonuclease-III-like NRZ29_17805 PF00035 Double-stranded RNA binding motif NRZ29_17810 PF10502 Signal peptidase, peptidase S26 NRZ29_17815 PF00009 Elongation factor Tu GTP binding domain NRZ29_17815 PF03144 Elongation factor Tu domain 2 NRZ29_17815 PF06421 GTP-binding protein LepA C-terminus NRZ29_17815 PF00679 Elongation factor G C-terminus NRZ29_17825 PF03888 MucB/RseB N-terminal domain NRZ29_17825 PF17188 MucB/RseB C-terminal domain NRZ29_17830 PF03873 Anti sigma-E protein RseA, C-terminal domain NRZ29_17830 PF03872 Anti sigma-E protein RseA, N-terminal domain NRZ29_17835 PF08281 Sigma-70, region 4 NRZ29_17835 PF04542 Sigma-70 region 2 NRZ29_17840 PF02910 Fumarate reductase flavoprotein C-term NRZ29_17840 PF00890 FAD binding domain NRZ29_17850 PF03937 Flavinator of succinate dehydrogenase NRZ29_17855 PF01571 Aminomethyltransferase folate-binding domain NRZ29_17860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_17860 PF03466 LysR substrate binding domain NRZ29_17875 PF03091 CutA1 divalent ion tolerance protein NRZ29_17880 PF11412 Disulphide bond corrector protein DsbC NRZ29_17880 PF02683 Cytochrome C biogenesis protein transmembrane region NRZ29_17895 PF01266 FAD dependent oxidoreductase NRZ29_17900 PF01116 Fructose-bisphosphate aldolase class-II NRZ29_17905 PF00162 Phosphoglycerate kinase NRZ29_17910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NRZ29_17910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NRZ29_17915 PF00480 ROK family NRZ29_17920 PF01208 Uroporphyrinogen decarboxylase (URO-D) NRZ29_17925 PF00293 NUDIX domain NRZ29_17925 PF09297 NADH pyrophosphatase zinc ribbon domain NRZ29_17930 PF00171 Aldehyde dehydrogenase family NRZ29_17930 PF01619 Proline dehydrogenase NRZ29_17930 PF14850 DNA-binding domain of Proline dehydrogenase NRZ29_17930 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NRZ29_17935 PF08239 Bacterial SH3 domain NRZ29_17940 PF00027 Cyclic nucleotide-binding domain NRZ29_17940 PF00520 Ion transport protein NRZ29_17945 PF02743 Cache domain NRZ29_17945 PF00672 HAMP domain NRZ29_17945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_17955 PF08335 GlnD PII-uridylyltransferase NRZ29_17955 PF03710 Glutamate-ammonia ligase adenylyltransferase NRZ29_17975 PF00326 Prolyl oligopeptidase family NRZ29_17975 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NRZ29_17980 PF00291 Pyridoxal-phosphate dependent enzyme NRZ29_17985 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_17990 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_17995 PF00005 ABC transporter NRZ29_18000 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ29_18005 PF00005 ABC transporter NRZ29_18005 PF02687 FtsX-like permease family NRZ29_18005 PF12704 MacB-like periplasmic core domain NRZ29_18010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NRZ29_18015 PF00072 Response regulator receiver domain NRZ29_18015 PF00486 Transcriptional regulatory protein, C terminal NRZ29_18020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_18020 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_18020 PF16527 Two-component sensor protein CpxA, periplasmic domain NRZ29_18020 PF00672 HAMP domain NRZ29_18025 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NRZ29_18025 PF09297 NADH pyrophosphatase zinc ribbon domain NRZ29_18025 PF00293 NUDIX domain NRZ29_18060 PF03060 Nitronate monooxygenase NRZ29_18070 PF00445 Ribonuclease T2 family NRZ29_18085 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase NRZ29_18105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_18105 PF03466 LysR substrate binding domain NRZ29_18110 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_18115 PF00271 Helicase conserved C-terminal domain NRZ29_18115 PF00270 DEAD/DEAH box helicase NRZ29_18125 PF00753 Metallo-beta-lactamase superfamily NRZ29_18135 PF01425 Amidase NRZ29_18140 PF04371 Porphyromonas-type peptidyl-arginine deiminase NRZ29_18145 PF03466 LysR substrate binding domain NRZ29_18145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_18150 PF04480 Protein of unknown function (DUF559) NRZ29_18160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NRZ29_18165 PF00583 Acetyltransferase (GNAT) family NRZ29_18185 PF16658 Class II release factor RF3, C-terminal domain NRZ29_18185 PF03144 Elongation factor Tu domain 2 NRZ29_18185 PF00009 Elongation factor Tu GTP binding domain NRZ29_18190 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_18190 PF00072 Response regulator receiver domain NRZ29_18195 PF13188 PAS domain NRZ29_18195 PF03707 Bacterial signalling protein N terminal repeat NRZ29_18195 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_18195 PF00563 EAL domain NRZ29_18200 PF05762 VWA domain containing CoxE-like protein NRZ29_18205 PF12592 Protein of unknown function (DUF3763) NRZ29_18205 PF17868 AAA lid domain NRZ29_18205 PF07728 AAA domain (dynein-related subfamily) NRZ29_18215 PF00583 Acetyltransferase (GNAT) family NRZ29_18225 PF00501 AMP-binding enzyme NRZ29_18235 PF04262 Glutamate-cysteine ligase NRZ29_18240 PF05193 Peptidase M16 inactive domain NRZ29_18240 PF00675 Insulinase (Peptidase family M16) NRZ29_18245 PF09335 SNARE associated Golgi protein NRZ29_18250 PF08990 Erythronolide synthase docking NRZ29_18250 PF08659 KR domain NRZ29_18250 PF02801 Beta-ketoacyl synthase, C-terminal domain NRZ29_18250 PF00109 Beta-ketoacyl synthase, N-terminal domain NRZ29_18250 PF16197 Ketoacyl-synthetase C-terminal extension NRZ29_18250 PF08240 Alcohol dehydrogenase GroES-like domain NRZ29_18250 PF00698 Acyl transferase domain NRZ29_18250 PF00550 Phosphopantetheine attachment site NRZ29_18250 PF14765 Polyketide synthase dehydratase NRZ29_18270 PF00970 Oxidoreductase FAD-binding domain NRZ29_18270 PF00175 Oxidoreductase NAD-binding domain NRZ29_18275 PF03948 Ribosomal protein L9, C-terminal domain NRZ29_18275 PF01281 Ribosomal protein L9, N-terminal domain NRZ29_18280 PF01084 Ribosomal protein S18 NRZ29_18285 PF01250 Ribosomal protein S6 NRZ29_18290 PF01566 Natural resistance-associated macrophage protein NRZ29_18310 PF13673 Acetyltransferase (GNAT) domain NRZ29_18320 PF00588 SpoU rRNA Methylase family NRZ29_18320 PF08032 RNA 2'-O ribose methyltransferase substrate binding NRZ29_18325 PF00773 RNB domain NRZ29_18325 PF08206 Ribonuclease B OB domain NRZ29_18325 PF00575 S1 RNA binding domain NRZ29_18325 PF17876 Cold shock domain NRZ29_18325 PF08461 Ribonuclease R winged-helix domain NRZ29_18330 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_18335 PF02664 S-Ribosylhomocysteinase (LuxS) NRZ29_18345 PF00543 Nitrogen regulatory protein P-II NRZ29_18350 PF00795 Carbon-nitrogen hydrolase NRZ29_18350 PF02540 NAD synthase NRZ29_18385 PF07963 Prokaryotic N-terminal methylation motif NRZ29_18385 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor NRZ29_18390 PF02401 LytB protein NRZ29_18395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NRZ29_18400 PF01252 Signal peptidase (SPase) II NRZ29_18405 PF08264 Anticodon-binding domain of tRNA NRZ29_18405 PF00133 tRNA synthetases class I (I, L, M and V) NRZ29_18405 PF06827 Zinc finger found in FPG and IleRS NRZ29_18410 PF01687 Riboflavin kinase NRZ29_18410 PF06574 FAD synthetase NRZ29_18420 PF03023 Lipid II flippase MurJ NRZ29_18425 PF01649 Ribosomal protein S20 NRZ29_18430 PF01022 Bacterial regulatory protein, arsR family NRZ29_18435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_18435 PF03466 LysR substrate binding domain NRZ29_18445 PF06965 Na+/H+ antiporter 1 NRZ29_18450 PF00303 Thymidylate synthase NRZ29_18455 PF01790 Prolipoprotein diacylglyceryl transferase NRZ29_18460 PF01590 GAF domain NRZ29_18460 PF05524 PEP-utilising enzyme, N-terminal NRZ29_18460 PF00391 PEP-utilising enzyme, mobile domain NRZ29_18460 PF02896 PEP-utilising enzyme, TIM barrel domain NRZ29_18465 PF00293 NUDIX domain NRZ29_18470 PF02976 DNA mismatch repair enzyme MutH NRZ29_18480 PF01245 Ribosomal protein L19 NRZ29_18485 PF01746 tRNA (Guanine-1)-methyltransferase NRZ29_18490 PF05239 PRC-barrel domain NRZ29_18490 PF01782 RimM N-terminal domain NRZ29_18495 PF00886 Ribosomal protein S16 NRZ29_18500 PF00448 SRP54-type protein, GTPase domain NRZ29_18500 PF02881 SRP54-type protein, helical bundle domain NRZ29_18500 PF02978 Signal peptide binding domain NRZ29_18505 PF01578 Cytochrome C assembly protein NRZ29_18510 PF00571 CBS domain NRZ29_18510 PF01595 Cyclin M transmembrane N-terminal domain NRZ29_18510 PF03471 Transporter associated domain NRZ29_18515 PF02082 Transcriptional regulator NRZ29_18520 PF00970 Oxidoreductase FAD-binding domain NRZ29_18520 PF00042 Globin NRZ29_18520 PF00175 Oxidoreductase NAD-binding domain NRZ29_18525 PF08238 Sel1 repeat NRZ29_18530 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NRZ29_18530 PF00056 lactate/malate dehydrogenase, NAD binding domain NRZ29_18535 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_18540 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_18545 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ29_18550 PF00005 ABC transporter NRZ29_18555 PF01316 Arginine repressor, DNA binding domain NRZ29_18555 PF02863 Arginine repressor, C-terminal domain NRZ29_18560 PF04261 Dyp-type peroxidase family NRZ29_18565 PF00005 ABC transporter NRZ29_18565 PF08402 TOBE domain NRZ29_18575 PF13416 Bacterial extracellular solute-binding protein NRZ29_18580 PF00543 Nitrogen regulatory protein P-II NRZ29_18585 PF00472 RF-1 domain NRZ29_18590 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NRZ29_18590 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NRZ29_18595 PF01773 Na+ dependent nucleoside transporter N-terminus NRZ29_18595 PF07662 Na+ dependent nucleoside transporter C-terminus NRZ29_18595 PF07670 Nucleoside recognition NRZ29_18600 PF03466 LysR substrate binding domain NRZ29_18600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_18605 PF00255 Glutathione peroxidase NRZ29_18615 PF02595 Glycerate kinase family NRZ29_18620 PF02447 GntP family permease NRZ29_18625 PF13556 PucR C-terminal helix-turn-helix domain NRZ29_18625 PF17853 GGDEF-like domain NRZ29_18625 PF05651 Putative sugar diacid recognition NRZ29_18630 PF06062 Uncharacterised protein family (UPF0231) NRZ29_18645 PF08447 PAS fold NRZ29_18645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_18650 PF03372 Endonuclease/Exonuclease/phosphatase family NRZ29_18665 PF00271 Helicase conserved C-terminal domain NRZ29_18665 PF00270 DEAD/DEAH box helicase NRZ29_18675 PF08534 Redoxin NRZ29_18680 PF00403 Heavy-metal-associated domain NRZ29_18685 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NRZ29_18685 PF17967 Pullulanase N2 domain NRZ29_18685 PF18494 Pullulanase Ins domain NRZ29_18685 PF03714 Bacterial pullanase-associated domain NRZ29_18685 PF11852 Domain of unknown function (DUF3372) NRZ29_18700 PF02583 Metal-sensitive transcriptional repressor NRZ29_18705 PF00155 Aminotransferase class I and II NRZ29_18710 PF03466 LysR substrate binding domain NRZ29_18710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_18720 PF04055 Radical SAM superfamily NRZ29_18725 PF11230 Protein of unknown function (DUF3029) NRZ29_18745 PF07676 WD40-like Beta Propeller Repeat NRZ29_18745 PF14684 Tricorn protease C1 domain NRZ29_18745 PF14685 Tricorn protease PDZ domain NRZ29_18745 PF03572 Peptidase family S41 NRZ29_18775 PF08269 Cache domain NRZ29_18775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_18780 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NRZ29_18780 PF18416 N-acetylglucosamine binding protein domain 2 NRZ29_18785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_18785 PF03466 LysR substrate binding domain NRZ29_18790 PF00005 ABC transporter NRZ29_18790 PF12857 TOBE-like domain NRZ29_18795 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_18800 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_18815 PF13194 Domain of unknown function (DUF4010) NRZ29_18820 PF14602 Hexapeptide repeat of succinyl-transferase NRZ29_18820 PF12464 Maltose acetyltransferase NRZ29_18840 PF01734 Patatin-like phospholipase NRZ29_18845 PF14698 Argininosuccinate lyase C-terminal NRZ29_18845 PF00206 Lyase NRZ29_18850 PF00764 Arginosuccinate synthase NRZ29_18855 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NRZ29_18855 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NRZ29_18860 PF00696 Amino acid kinase family NRZ29_18865 PF01118 Semialdehyde dehydrogenase, NAD binding domain NRZ29_18865 PF02774 Semialdehyde dehydrogenase, dimerisation domain NRZ29_18870 PF07687 Peptidase dimerisation domain NRZ29_18870 PF01546 Peptidase family M20/M25/M40 NRZ29_18875 PF00311 Phosphoenolpyruvate carboxylase NRZ29_18880 PF00696 Amino acid kinase family NRZ29_18880 PF00742 Homoserine dehydrogenase NRZ29_18880 PF03447 Homoserine dehydrogenase, NAD binding domain NRZ29_18885 PF01053 Cys/Met metabolism PLP-dependent enzyme NRZ29_18890 PF01340 Met Apo-repressor, MetJ NRZ29_18895 PF06445 GyrI-like small molecule binding domain NRZ29_18895 PF12833 Helix-turn-helix domain NRZ29_18900 PF01588 Putative tRNA binding domain NRZ29_18905 PF03222 Tryptophan/tyrosine permease family NRZ29_18910 PF00459 Inositol monophosphatase family NRZ29_18915 PF00293 NUDIX domain NRZ29_18920 PF13419 Haloacid dehalogenase-like hydrolase NRZ29_18925 PF01479 S4 domain NRZ29_18925 PF00579 tRNA synthetases class I (W and Y) NRZ29_18930 PF00196 Bacterial regulatory proteins, luxR family NRZ29_18935 PF01203 Type II secretion system (T2SS), protein N NRZ29_18940 PF04612 Type II secretion system (T2SS), protein M NRZ29_18945 PF12693 GspL periplasmic domain NRZ29_18945 PF05134 Type II secretion system (T2SS), protein L NRZ29_18950 PF03934 Type II secretion system (T2SS), protein K NRZ29_18955 PF11612 Type II secretion system (T2SS), protein J NRZ29_18955 PF07963 Prokaryotic N-terminal methylation motif NRZ29_18960 PF07963 Prokaryotic N-terminal methylation motif NRZ29_18960 PF02501 Type II secretion system (T2SS), protein I NRZ29_18965 PF12019 Type II transport protein GspH NRZ29_18965 PF07963 Prokaryotic N-terminal methylation motif NRZ29_18975 PF07963 Prokaryotic N-terminal methylation motif NRZ29_18975 PF08334 Type II secretion system (T2SS), protein G NRZ29_18980 PF00482 Type II secretion system (T2SS), protein F NRZ29_18985 PF00437 Type II/IV secretion system protein NRZ29_18990 PF03958 Bacterial type II/III secretion system short domain NRZ29_18990 PF00263 Bacterial type II and III secretion system protein NRZ29_18995 PF11356 Type II secretion system protein C NRZ29_19000 PF01479 S4 domain NRZ29_19005 PF01430 Hsp33 protein NRZ29_19010 PF01293 Phosphoenolpyruvate carboxykinase NRZ29_19015 PF00392 Bacterial regulatory proteins, gntR family NRZ29_19020 PF00557 Metallopeptidase family M24 NRZ29_19020 PF01321 Creatinase/Prolidase N-terminal domain NRZ29_19025 PF11756 Nitrous oxide-stimulated promoter NRZ29_19030 PF00583 Acetyltransferase (GNAT) family NRZ29_19035 PF05433 Glycine zipper 2TM domain NRZ29_19040 PF02872 5'-nucleotidase, C-terminal domain NRZ29_19040 PF00149 Calcineurin-like phosphoesterase NRZ29_19045 PF01810 LysE type translocator NRZ29_19050 PF03472 Autoinducer binding domain NRZ29_19050 PF00196 Bacterial regulatory proteins, luxR family NRZ29_19055 PF00765 Autoinducer synthase NRZ29_19060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_19060 PF03466 LysR substrate binding domain NRZ29_19065 PF00773 RNB domain NRZ29_19065 PF17876 Cold shock domain NRZ29_19065 PF08206 Ribonuclease B OB domain NRZ29_19070 PF00440 Bacterial regulatory proteins, tetR family NRZ29_19080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRZ29_19080 PF02378 Phosphotransferase system, EIIC NRZ29_19080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NRZ29_19085 PF01232 Mannitol dehydrogenase Rossmann domain NRZ29_19085 PF08125 Mannitol dehydrogenase C-terminal domain NRZ29_19090 PF05068 Mannitol repressor NRZ29_19095 PF03471 Transporter associated domain NRZ29_19095 PF02080 TrkA-C domain NRZ29_19095 PF00999 Sodium/hydrogen exchanger family NRZ29_19115 PF01544 CorA-like Mg2+ transporter protein NRZ29_19120 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NRZ29_19135 PF04307 LexA-binding, inner membrane-associated putative hydrolase NRZ29_19140 PF07662 Na+ dependent nucleoside transporter C-terminus NRZ29_19140 PF01773 Na+ dependent nucleoside transporter N-terminus NRZ29_19140 PF07670 Nucleoside recognition NRZ29_19145 PF03880 DbpA RNA binding domain NRZ29_19145 PF00270 DEAD/DEAH box helicase NRZ29_19145 PF00271 Helicase conserved C-terminal domain NRZ29_19170 PF01040 UbiA prenyltransferase family NRZ29_19175 PF00425 chorismate binding enzyme NRZ29_19180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NRZ29_19180 PF16582 Middle domain of thiamine pyrophosphate NRZ29_19180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NRZ29_19185 PF12697 Alpha/beta hydrolase family NRZ29_19190 PF00378 Enoyl-CoA hydratase/isomerase NRZ29_19195 PF13378 Enolase C-terminal domain-like NRZ29_19200 PF00501 AMP-binding enzyme NRZ29_19210 PF00419 Fimbrial protein NRZ29_19215 PF00419 Fimbrial protein NRZ29_19220 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NRZ29_19220 PF02753 Pili assembly chaperone PapD, C-terminal domain NRZ29_19225 PF13953 PapC C-terminal domain NRZ29_19225 PF13954 PapC N-terminal domain NRZ29_19225 PF00577 Outer membrane usher protein NRZ29_19235 PF00419 Fimbrial protein NRZ29_19245 PF08453 Peptidase family M9 N-terminal NRZ29_19245 PF01752 Collagenase NRZ29_19250 PF02698 DUF218 domain NRZ29_19255 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NRZ29_19255 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NRZ29_19265 PF00561 alpha/beta hydrolase fold NRZ29_19270 PF03280 Proteobacterial lipase chaperone protein NRZ29_19285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NRZ29_19285 PF12793 Sugar transport-related sRNA regulator N-term NRZ29_19295 PF01053 Cys/Met metabolism PLP-dependent enzyme NRZ29_19305 PF00465 Iron-containing alcohol dehydrogenase NRZ29_19320 PF03577 Peptidase family C69 NRZ29_19325 PF00106 short chain dehydrogenase NRZ29_19345 PF02308 MgtC family NRZ29_19350 PF02903 Alpha amylase, N-terminal ig-like domain NRZ29_19350 PF00128 Alpha amylase, catalytic domain NRZ29_19350 PF16657 Maltogenic Amylase, C-terminal domain NRZ29_19365 PF00884 Sulfatase NRZ29_19370 PF01037 Lrp/AsnC ligand binding domain NRZ29_19380 PF04204 Homoserine O-succinyltransferase NRZ29_19385 PF01966 HD domain NRZ29_19385 PF00013 KH domain NRZ29_19385 PF12072 Domain of unknown function (DUF3552) NRZ29_19390 PF02464 Competence-damaged protein NRZ29_19390 PF00994 Probable molybdopterin binding domain NRZ29_19405 PF07722 Peptidase C26 NRZ29_19415 PF13545 Crp-like helix-turn-helix domain NRZ29_19415 PF00027 Cyclic nucleotide-binding domain NRZ29_19425 PF13419 Haloacid dehalogenase-like hydrolase NRZ29_19430 PF02899 Phage integrase, N-terminal SAM-like domain NRZ29_19430 PF00589 Phage integrase family NRZ29_19440 PF01678 Diaminopimelate epimerase NRZ29_19445 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NRZ29_19445 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NRZ29_19455 PF01491 Frataxin-like domain NRZ29_19460 PF02230 Phospholipase/Carboxylesterase NRZ29_19465 PF01295 Adenylate cyclase, class-I NRZ29_19465 PF12633 Adenylate cyclase NT domain NRZ29_19470 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NRZ29_19470 PF03900 Porphobilinogen deaminase, C-terminal domain NRZ29_19475 PF02602 Uroporphyrinogen-III synthase HemD NRZ29_19480 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase NRZ29_19490 PF03692 Putative zinc- or iron-chelating domain NRZ29_19495 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NRZ29_19510 PF07715 TonB-dependent Receptor Plug Domain NRZ29_19510 PF00593 TonB dependent receptor NRZ29_19535 PF01638 HxlR-like helix-turn-helix NRZ29_19540 PF08803 Putative mono-oxygenase ydhR NRZ29_19555 PF06055 Exopolysaccharide synthesis, ExoD NRZ29_19565 PF17151 Periplasmic sensor domain NRZ29_19565 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_19585 PF13036 Peptidoglycan-synthase activator LpoB NRZ29_19605 PF06968 Biotin and Thiamin Synthesis associated domain NRZ29_19605 PF04055 Radical SAM superfamily NRZ29_19610 PF05690 Thiazole biosynthesis protein ThiG NRZ29_19620 PF00899 ThiF family NRZ29_19625 PF02581 Thiamine monophosphate synthase NRZ29_19630 PF13667 ThiC-associated domain NRZ29_19630 PF01964 Radical SAM ThiC family NRZ29_19635 PF01117 Aerolysin toxin NRZ29_19635 PF03440 Aerolysin/Pertussis toxin (APT) domain NRZ29_19650 PF00072 Response regulator receiver domain NRZ29_19650 PF00486 Transcriptional regulatory protein, C terminal NRZ29_19655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_19660 PF05525 Branched-chain amino acid transport protein NRZ29_19665 PF18030 RimK PreATP-grasp domain NRZ29_19665 PF08443 RimK-like ATP-grasp domain NRZ29_19670 PF02310 B12 binding domain NRZ29_19670 PF02607 B12 binding domain NRZ29_19670 PF02965 Vitamin B12 dependent methionine synthase, activation domain NRZ29_19670 PF00809 Pterin binding enzyme NRZ29_19670 PF02574 Homocysteine S-methyltransferase NRZ29_19675 PF00999 Sodium/hydrogen exchanger family NRZ29_19690 PF08668 HDOD domain NRZ29_19700 PF04228 Putative neutral zinc metallopeptidase NRZ29_19705 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) NRZ29_19720 PF13426 PAS domain NRZ29_19720 PF08447 PAS fold NRZ29_19720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_19725 PF08678 Rsbr N terminal NRZ29_19725 PF01740 STAS domain NRZ29_19730 PF13581 Histidine kinase-like ATPase domain NRZ29_19735 PF00672 HAMP domain NRZ29_19735 PF01627 Hpt domain NRZ29_19735 PF00072 Response regulator receiver domain NRZ29_19735 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NRZ29_19735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_19735 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_19740 PF00072 Response regulator receiver domain NRZ29_19750 PF07690 Major Facilitator Superfamily NRZ29_19755 PF01914 MarC family integral membrane protein NRZ29_19770 PF13580 SIS domain NRZ29_19775 PF00367 phosphotransferase system, EIIB NRZ29_19775 PF02378 Phosphotransferase system, EIIC NRZ29_19790 PF01418 Helix-turn-helix domain, rpiR family NRZ29_19790 PF01380 SIS domain NRZ29_19795 PF01523 Putative modulator of DNA gyrase NRZ29_19800 PF00795 Carbon-nitrogen hydrolase NRZ29_19815 PF13502 AsmA-like C-terminal region NRZ29_19815 PF13116 Protein of unknown function NRZ29_19820 PF00575 S1 RNA binding domain NRZ29_19820 PF10150 Ribonuclease E/G family NRZ29_19825 PF02545 Maf-like protein NRZ29_19830 PF04093 rod shape-determining protein MreD NRZ29_19835 PF04085 rod shape-determining protein MreC NRZ29_19865 PF00114 Pilin (bacterial filament) NRZ29_19865 PF07963 Prokaryotic N-terminal methylation motif NRZ29_19875 PF07963 Prokaryotic N-terminal methylation motif NRZ29_19885 PF00482 Type II secretion system (T2SS), protein F NRZ29_19890 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NRZ29_19890 PF00437 Type II/IV secretion system protein NRZ29_19905 PF00263 Bacterial type II and III secretion system protein NRZ29_19905 PF03958 Bacterial type II/III secretion system short domain NRZ29_19935 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_19935 PF00563 EAL domain NRZ29_19935 PF17157 Gammaproteobacterial periplasmic sensor domain NRZ29_19940 PF00563 EAL domain NRZ29_19940 PF12792 CSS motif domain associated with EAL NRZ29_19945 PF01699 Sodium/calcium exchanger protein NRZ29_19950 PF00221 Aromatic amino acid lyase NRZ29_19955 PF01175 Urocanase Rossmann-like domain NRZ29_19955 PF17392 Urocanase C-terminal domain NRZ29_19955 PF17391 Urocanase N-terminal domain NRZ29_19960 PF00491 Arginase family NRZ29_19965 PF01979 Amidohydrolase family NRZ29_19970 PF00392 Bacterial regulatory proteins, gntR family NRZ29_19970 PF07702 UTRA domain NRZ29_19975 PF00484 Carbonic anhydrase NRZ29_19980 PF00140 Sigma-70 factor, region 1.2 NRZ29_19980 PF04542 Sigma-70 region 2 NRZ29_19980 PF04545 Sigma-70, region 4 NRZ29_19985 PF18075 FtsX extracellular domain NRZ29_19990 PF00005 ABC transporter NRZ29_19995 PF02881 SRP54-type protein, helical bundle domain NRZ29_19995 PF00448 SRP54-type protein, GTPase domain NRZ29_20010 PF07226 Protein of unknown function (DUF1422) NRZ29_20015 PF00440 Bacterial regulatory proteins, tetR family NRZ29_20025 PF13091 PLD-like domain NRZ29_20035 PF01464 Transglycosylase SLT domain NRZ29_20045 PF02416 mttA/Hcf106 family NRZ29_20050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_20050 PF03466 LysR substrate binding domain NRZ29_20055 PF01914 MarC family integral membrane protein NRZ29_20060 PF10678 Protein of unknown function (DUF2492) NRZ29_20065 PF00375 Sodium:dicarboxylate symporter family NRZ29_20075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_20075 PF03466 LysR substrate binding domain NRZ29_20080 PF13533 Biotin-lipoyl like NRZ29_20085 PF07690 Major Facilitator Superfamily NRZ29_20090 PF07947 YhhN family NRZ29_20115 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NRZ29_20115 PF00326 Prolyl oligopeptidase family NRZ29_20130 PF00106 short chain dehydrogenase NRZ29_20135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_20135 PF03466 LysR substrate binding domain NRZ29_20140 PF02525 Flavodoxin-like fold NRZ29_20145 PF00999 Sodium/hydrogen exchanger family NRZ29_20145 PF02254 TrkA-N domain NRZ29_20185 PF01196 Ribosomal protein L17 NRZ29_20190 PF01000 RNA polymerase Rpb3/RpoA insert domain NRZ29_20190 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NRZ29_20190 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NRZ29_20195 PF00163 Ribosomal protein S4/S9 N-terminal domain NRZ29_20195 PF01479 S4 domain NRZ29_20200 PF00411 Ribosomal protein S11 NRZ29_20205 PF00416 Ribosomal protein S13/S18 NRZ29_20210 PF00444 Ribosomal protein L36 NRZ29_20215 PF00344 SecY translocase NRZ29_20220 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NRZ29_20225 PF00327 Ribosomal protein L30p/L7e NRZ29_20230 PF00333 Ribosomal protein S5, N-terminal domain NRZ29_20230 PF03719 Ribosomal protein S5, C-terminal domain NRZ29_20235 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NRZ29_20240 PF00347 Ribosomal protein L6 NRZ29_20245 PF00410 Ribosomal protein S8 NRZ29_20250 PF00253 Ribosomal protein S14p/S29e NRZ29_20255 PF00281 Ribosomal protein L5 NRZ29_20255 PF00673 ribosomal L5P family C-terminus NRZ29_20260 PF00467 KOW motif NRZ29_20260 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NRZ29_20265 PF00238 Ribosomal protein L14p/L23e NRZ29_20270 PF00366 Ribosomal protein S17 NRZ29_20275 PF00831 Ribosomal L29 protein NRZ29_20280 PF00252 Ribosomal protein L16p/L10e NRZ29_20285 PF07650 KH domain NRZ29_20285 PF00189 Ribosomal protein S3, C-terminal domain NRZ29_20290 PF00237 Ribosomal protein L22p/L17e NRZ29_20295 PF00203 Ribosomal protein S19 NRZ29_20300 PF00181 Ribosomal Proteins L2, RNA binding domain NRZ29_20300 PF03947 Ribosomal Proteins L2, C-terminal domain NRZ29_20305 PF00276 Ribosomal protein L23 NRZ29_20310 PF00573 Ribosomal protein L4/L1 family NRZ29_20315 PF00297 Ribosomal protein L3 NRZ29_20320 PF00338 Ribosomal protein S10p/S20e NRZ29_20330 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_20330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_20330 PF00672 HAMP domain NRZ29_20335 PF00486 Transcriptional regulatory protein, C terminal NRZ29_20335 PF00072 Response regulator receiver domain NRZ29_20340 PF03449 Transcription elongation factor, N-terminal NRZ29_20340 PF01272 Transcription elongation factor, GreA/GreB, C-term NRZ29_20345 PF00575 S1 RNA binding domain NRZ29_20345 PF17674 HHH domain NRZ29_20345 PF16921 Tex protein YqgF-like domain NRZ29_20345 PF09371 Tex-like protein N-terminal domain NRZ29_20365 PF00561 alpha/beta hydrolase fold NRZ29_20370 PF00156 Phosphoribosyl transferase domain NRZ29_20375 PF01521 Iron-sulphur cluster biosynthesis NRZ29_20375 PF01106 NifU-like domain NRZ29_20380 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NRZ29_20380 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NRZ29_20385 PF02556 Preprotein translocase subunit SecB NRZ29_20390 PF00581 Rhodanese-like domain NRZ29_20395 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NRZ29_20395 PF01676 Metalloenzyme superfamily NRZ29_20400 PF01551 Peptidase family M23 NRZ29_20410 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRZ29_20410 PF00356 Bacterial regulatory proteins, lacI family NRZ29_20415 PF01081 KDPG and KHG aldolase NRZ29_20420 PF00920 Dehydratase family NRZ29_20425 PF01202 Shikimate kinase NRZ29_20430 PF02447 GntP family permease NRZ29_20435 PF13091 PLD-like domain NRZ29_20440 PF17191 RecG wedge domain NRZ29_20440 PF00270 DEAD/DEAH box helicase NRZ29_20440 PF00271 Helicase conserved C-terminal domain NRZ29_20450 PF00583 Acetyltransferase (GNAT) family NRZ29_20450 PF09500 Putative thioesterase (yiiD_Cterm) NRZ29_20460 PF02580 D-Tyr-tRNA(Tyr) deacylase NRZ29_20465 PF03631 Virulence factor BrkB NRZ29_20470 PF00679 Elongation factor G C-terminus NRZ29_20470 PF00009 Elongation factor Tu GTP binding domain NRZ29_20470 PF03144 Elongation factor Tu domain 2 NRZ29_20475 PF00120 Glutamine synthetase, catalytic domain NRZ29_20475 PF03951 Glutamine synthetase, beta-Grasp domain NRZ29_20485 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_20485 PF00989 PAS fold NRZ29_20485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_20490 PF02954 Bacterial regulatory protein, Fis family NRZ29_20490 PF00158 Sigma-54 interaction domain NRZ29_20490 PF00072 Response regulator receiver domain NRZ29_20495 PF00962 Adenosine/AMP deaminase NRZ29_20500 PF04055 Radical SAM superfamily NRZ29_20500 PF06969 HemN C-terminal domain NRZ29_20505 PF10675 Protein of unknown function (DUF2489) NRZ29_20510 PF04220 Der GTPase activator (YihI) NRZ29_20515 PF00034 Cytochrome c NRZ29_20520 PF01926 50S ribosome-binding GTPase NRZ29_20525 PF07369 Protein of unknown function (DUF1488) NRZ29_20530 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NRZ29_20530 PF01488 Shikimate / quinate 5-dehydrogenase NRZ29_20530 PF08501 Shikimate dehydrogenase substrate binding domain NRZ29_20535 PF01218 Coproporphyrinogen III oxidase NRZ29_20540 PF01300 Telomere recombination NRZ29_20545 PF00731 AIR carboxylase NRZ29_20550 PF01396 Topoisomerase DNA binding C4 zinc finger NRZ29_20555 PF04361 Protein of unknown function (DUF494) NRZ29_20560 PF02481 DNA recombination-mediator protein A NRZ29_20560 PF17782 DprA winged helix domain NRZ29_20570 PF01327 Polypeptide deformylase NRZ29_20575 PF02911 Formyl transferase, C-terminal domain NRZ29_20575 PF00551 Formyl transferase NRZ29_20580 PF01189 16S rRNA methyltransferase RsmB/F NRZ29_20580 PF01029 NusB family NRZ29_20585 PF02080 TrkA-C domain NRZ29_20585 PF02254 TrkA-N domain NRZ29_20590 PF02386 Cation transport protein NRZ29_20595 PF02646 RmuC family NRZ29_20610 PF02082 Transcriptional regulator NRZ29_20615 PF00294 pfkB family carbohydrate kinase NRZ29_20620 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NRZ29_20620 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NRZ29_20625 PF02540 NAD synthase NRZ29_20625 PF00958 GMP synthase C terminal domain NRZ29_20625 PF00117 Glutamine amidotransferase class-I NRZ29_20630 PF00171 Aldehyde dehydrogenase family NRZ29_20635 PF00202 Aminotransferase class-III NRZ29_20640 PF01381 Helix-turn-helix NRZ29_20640 PF07883 Cupin domain NRZ29_20645 PF00171 Aldehyde dehydrogenase family NRZ29_20655 PF00892 EamA-like transporter family NRZ29_20660 PF12833 Helix-turn-helix domain NRZ29_20665 PF01810 LysE type translocator NRZ29_20670 PF00690 Cation transporter/ATPase, N-terminus NRZ29_20670 PF00689 Cation transporting ATPase, C-terminus NRZ29_20675 PF04143 Sulphur transport NRZ29_20690 PF06206 CpeT/CpcT family (DUF1001) NRZ29_20720 PF14001 YdfZ protein NRZ29_20735 PF03466 LysR substrate binding domain NRZ29_20735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_20755 PF00580 UvrD/REP helicase N-terminal domain NRZ29_20755 PF13361 UvrD-like helicase C-terminal domain NRZ29_20760 PF02608 ABC transporter substrate-binding protein PnrA-like NRZ29_20765 PF00005 ABC transporter NRZ29_20770 PF02653 Branched-chain amino acid transport system / permease component NRZ29_20775 PF02653 Branched-chain amino acid transport system / permease component NRZ29_20780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_20780 PF03466 LysR substrate binding domain NRZ29_20785 PF08240 Alcohol dehydrogenase GroES-like domain NRZ29_20785 PF00107 Zinc-binding dehydrogenase NRZ29_20790 PF00756 Putative esterase NRZ29_20800 PF12867 DinB superfamily NRZ29_20800 PF03781 Sulfatase-modifying factor enzyme 1 NRZ29_20805 PF13593 SBF-like CPA transporter family (DUF4137) NRZ29_20810 PF13520 Amino acid permease NRZ29_20815 PF01588 Putative tRNA binding domain NRZ29_20820 PF13520 Amino acid permease NRZ29_20825 PF04074 YhcH/YjgK/YiaL NRZ29_20830 PF02929 Beta galactosidase small chain NRZ29_20830 PF02837 Glycosyl hydrolases family 2, sugar binding domain NRZ29_20830 PF16353 Domain of unknown function(DUF4981) NRZ29_20830 PF00703 Glycosyl hydrolases family 2 NRZ29_20830 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NRZ29_20835 PF00356 Bacterial regulatory proteins, lacI family NRZ29_20870 PF00132 Bacterial transferase hexapeptide (six repeats) NRZ29_20875 PF01612 3'-5' exonuclease NRZ29_20875 PF00476 DNA polymerase family A NRZ29_20875 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NRZ29_20875 PF01367 5'-3' exonuclease, C-terminal SAM fold NRZ29_20885 PF06005 Cell division protein ZapB NRZ29_20895 PF00132 Bacterial transferase hexapeptide (six repeats) NRZ29_20895 PF06426 Serine acetyltransferase, N-terminal NRZ29_20900 PF01545 Cation efflux family NRZ29_20900 PF16916 Dimerisation domain of Zinc Transporter NRZ29_20905 PF00072 Response regulator receiver domain NRZ29_20905 PF00486 Transcriptional regulatory protein, C terminal NRZ29_20910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_20910 PF00672 HAMP domain NRZ29_20910 PF16527 Two-component sensor protein CpxA, periplasmic domain NRZ29_20910 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_20915 PF00588 SpoU rRNA Methylase family NRZ29_20920 PF01554 MatE NRZ29_20925 PF02630 SCO1/SenC NRZ29_20935 PF00717 Peptidase S24-like NRZ29_20935 PF01726 LexA DNA binding domain NRZ29_20940 PF01553 Acyltransferase NRZ29_20945 PF01040 UbiA prenyltransferase family NRZ29_20950 PF04345 Chorismate lyase NRZ29_20955 PF03748 Flagellar basal body-associated protein FliL NRZ29_20975 PF08240 Alcohol dehydrogenase GroES-like domain NRZ29_20975 PF00107 Zinc-binding dehydrogenase NRZ29_20980 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NRZ29_20980 PF00356 Bacterial regulatory proteins, lacI family NRZ29_20985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NRZ29_20995 PF03611 PTS system sugar-specific permease component NRZ29_21000 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NRZ29_21005 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NRZ29_21010 PF00535 Glycosyl transferase family 2 NRZ29_21015 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NRZ29_21020 PF01467 Cytidylyltransferase-like NRZ29_21025 PF04393 Protein of unknown function (DUF535) NRZ29_21030 PF06827 Zinc finger found in FPG and IleRS NRZ29_21030 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NRZ29_21030 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NRZ29_21040 PF00471 Ribosomal protein L33 NRZ29_21045 PF00830 Ribosomal L28 family NRZ29_21050 PF04002 RadC-like JAB domain NRZ29_21055 PF02441 Flavoprotein NRZ29_21055 PF04127 DNA / pantothenate metabolism flavoprotein NRZ29_21060 PF00692 dUTPase NRZ29_21065 PF00440 Bacterial regulatory proteins, tetR family NRZ29_21070 PF05552 Conserved TM helix NRZ29_21070 PF00924 Mechanosensitive ion channel NRZ29_21080 PF00342 Phosphoglucose isomerase NRZ29_21085 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NRZ29_21085 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NRZ29_21090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NRZ29_21090 PF03466 LysR substrate binding domain NRZ29_21105 PF13607 Succinyl-CoA ligase like flavodoxin domain NRZ29_21105 PF13380 CoA binding domain NRZ29_21105 PF00583 Acetyltransferase (GNAT) family NRZ29_21130 PF12724 Flavodoxin domain NRZ29_21135 PF02386 Cation transport protein NRZ29_21140 PF01205 Uncharacterized protein family UPF0029 NRZ29_21140 PF09186 Domain of unknown function (DUF1949) NRZ29_21145 PF00557 Metallopeptidase family M24 NRZ29_21150 PF13193 AMP-binding enzyme C-terminal domain NRZ29_21150 PF00501 AMP-binding enzyme NRZ29_21155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NRZ29_21155 PF00378 Enoyl-CoA hydratase/isomerase NRZ29_21155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NRZ29_21160 PF02803 Thiolase, C-terminal domain NRZ29_21160 PF00108 Thiolase, N-terminal domain NRZ29_21165 PF00486 Transcriptional regulatory protein, C terminal NRZ29_21165 PF00072 Response regulator receiver domain NRZ29_21170 PF00672 HAMP domain NRZ29_21170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_21170 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_21175 PF01547 Bacterial extracellular solute-binding protein NRZ29_21185 PF01206 Sulfurtransferase TusA NRZ29_21190 PF01042 Endoribonuclease L-PSP NRZ29_21195 PF13488 Glycine zipper NRZ29_21195 PF00691 OmpA family NRZ29_21200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NRZ29_21200 PF00672 HAMP domain NRZ29_21200 PF02743 Cache domain NRZ29_21205 PF03352 Methyladenine glycosylase NRZ29_21210 PF02091 Glycyl-tRNA synthetase alpha subunit NRZ29_21215 PF02092 Glycyl-tRNA synthetase beta subunit NRZ29_21215 PF05746 DALR anticodon binding domain NRZ29_21225 PF01202 Shikimate kinase NRZ29_21245 PF03222 Tryptophan/tyrosine permease family NRZ29_21250 PF12801 4Fe-4S binding domain NRZ29_21255 PF07702 UTRA domain NRZ29_21255 PF00392 Bacterial regulatory proteins, gntR family NRZ29_21260 PF00367 phosphotransferase system, EIIB NRZ29_21260 PF02378 Phosphotransferase system, EIIC NRZ29_21265 PF02056 Family 4 glycosyl hydrolase NRZ29_21265 PF11975 Family 4 glycosyl hydrolase C-terminal domain NRZ29_21270 PF00356 Bacterial regulatory proteins, lacI family NRZ29_21275 PF13458 Periplasmic binding protein NRZ29_21280 PF02653 Branched-chain amino acid transport system / permease component NRZ29_21285 PF11862 Domain of unknown function (DUF3382) NRZ29_21285 PF02653 Branched-chain amino acid transport system / permease component NRZ29_21290 PF12399 Branched-chain amino acid ATP-binding cassette transporter NRZ29_21290 PF00005 ABC transporter NRZ29_21295 PF00005 ABC transporter NRZ29_21310 PF00581 Rhodanese-like domain NRZ29_21315 PF01694 Rhomboid family NRZ29_21315 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease NRZ29_21320 PF12262 Bacterial virulence factor lipase N-terminal NRZ29_21325 PF04380 Membrane fusogenic activity NRZ29_21330 PF00175 Oxidoreductase NAD-binding domain NRZ29_21335 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NRZ29_21345 PF07498 Rho termination factor, N-terminal domain NRZ29_21345 PF07497 Rho termination factor, RNA-binding domain NRZ29_21345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRZ29_21350 PF00085 Thioredoxin NRZ29_21355 PF00271 Helicase conserved C-terminal domain NRZ29_21355 PF00270 DEAD/DEAH box helicase NRZ29_21360 PF02541 Ppx/GppA phosphatase family NRZ29_21370 PF04445 Putative SAM-dependent methyltransferase NRZ29_21375 PF00497 Bacterial extracellular solute-binding proteins, family 3 NRZ29_21380 PF00563 EAL domain NRZ29_21380 PF03707 Bacterial signalling protein N terminal repeat NRZ29_21380 PF00990 Diguanylate cyclase, GGDEF domain NRZ29_21385 PF01432 Peptidase family M3 NRZ29_21400 PF00490 Delta-aminolevulinic acid dehydratase NRZ29_21405 PF01026 TatD related DNase NRZ29_21410 PF00902 Sec-independent protein translocase protein (TatC) NRZ29_21415 PF02416 mttA/Hcf106 family NRZ29_21420 PF02416 mttA/Hcf106 family NRZ29_21425 PF03109 ABC1 family NRZ29_21430 PF02036 SCP-2 sterol transfer family NRZ29_21435 PF01209 ubiE/COQ5 methyltransferase family NRZ29_21440 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NRZ29_21445 PF07969 Amidohydrolase family NRZ29_21490 PF03544 Gram-negative bacterial TonB protein C-terminal NRZ29_21495 PF02472 Biopolymer transport protein ExbD/TolR NRZ29_21500 PF01618 MotA/TolQ/ExbB proton channel family NRZ29_21505 PF01618 MotA/TolQ/ExbB proton channel family NRZ29_21515 PF03472 Autoinducer binding domain NRZ29_21515 PF00196 Bacterial regulatory proteins, luxR family NRZ29_21520 PF01380 SIS domain NRZ29_21525 PF00455 DeoR C terminal sensor domain NRZ29_21525 PF08220 DeoR-like helix-turn-helix domain NRZ29_21530 PF00072 Response regulator receiver domain NRZ29_21530 PF00486 Transcriptional regulatory protein, C terminal NRZ29_21535 PF00672 HAMP domain NRZ29_21535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NRZ29_21535 PF00512 His Kinase A (phospho-acceptor) domain NRZ29_21540 PF00905 Penicillin binding protein transpeptidase domain NRZ29_21545 PF06123 Inner membrane protein CreD NRZ29_21550 PF00132 Bacterial transferase hexapeptide (six repeats) NRZ29_21550 PF14602 Hexapeptide repeat of succinyl-transferase NRZ29_21550 PF12804 MobA-like NTP transferase domain NRZ29_21555 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NRZ29_21555 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NRZ29_21560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRZ29_21560 PF02874 ATP synthase alpha/beta family, beta-barrel domain NRZ29_21565 PF00231 ATP synthase NRZ29_21570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NRZ29_21570 PF00306 ATP synthase alpha/beta chain, C terminal domain NRZ29_21570 PF02874 ATP synthase alpha/beta family, beta-barrel domain NRZ29_21575 PF00213 ATP synthase delta (OSCP) subunit NRZ29_21580 PF00430 ATP synthase B/B' CF(0) NRZ29_21585 PF00137 ATP synthase subunit C NRZ29_21590 PF00119 ATP synthase A chain NRZ29_21600 PF17762 HTH domain found in ParB protein NRZ29_21600 PF02195 ParB-like nuclease domain NRZ29_21605 PF13614 AAA domain NRZ29_21610 PF02527 rRNA small subunit methyltransferase G NRZ29_21615 PF01134 Glucose inhibited division protein A NRZ29_21615 PF13932 GidA associated domain NRZ29_21620 PF00258 Flavodoxin NRZ29_21625 PF07715 TonB-dependent Receptor Plug Domain NRZ29_21625 PF00593 TonB dependent receptor NRZ29_21630 PF00005 ABC transporter NRZ29_21635 PF00005 ABC transporter NRZ29_21645 PF01032 FecCD transport family NRZ29_21650 PF01926 50S ribosome-binding GTPase NRZ29_21650 PF12631 MnmE helical domain NRZ29_21650 PF10396 GTP-binding protein TrmE N-terminus NRZ29_21655 PF02096 60Kd inner membrane protein NRZ29_21655 PF14849 YidC periplasmic domain NRZ29_21660 PF01809 Putative membrane protein insertion efficiency factor NRZ29_21665 PF00825 Ribonuclease P NRZ29_21670 PF00468 Ribosomal protein L34 NRZ29_21675 PF00005 ABC transporter NRZ29_21680 PF00528 Binding-protein-dependent transport system inner membrane component NRZ29_21685 PF00497 Bacterial extracellular solute-binding proteins, family 3