locus-tag class description LCH17_00060 PF06892 Phage regulatory protein CII (CP76) LCH17_00075 PF01726 LexA DNA binding domain LCH17_00075 PF00717 Peptidase S24-like LCH17_00090 PF02899 Phage integrase, N-terminal SAM-like domain LCH17_00090 PF00589 Phage integrase family LCH17_00095 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LCH17_00095 PF01409 tRNA synthetases class II core domain (F) LCH17_00100 PF03483 B3/4 domain LCH17_00100 PF03484 tRNA synthetase B5 domain LCH17_00100 PF03147 Ferredoxin-fold anticodon binding domain LCH17_00100 PF01588 Putative tRNA binding domain LCH17_00100 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LCH17_00105 PF00216 Bacterial DNA-binding protein LCH17_00110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_00110 PF00512 His Kinase A (phospho-acceptor) domain LCH17_00110 PF09456 RcsC Alpha-Beta-Loop (ABL) LCH17_00110 PF00072 Response regulator receiver domain LCH17_00125 PF02146 Sir2 family LCH17_00135 PF00990 Diguanylate cyclase, GGDEF domain LCH17_00135 PF17152 Periplasmic sensor domain LCH17_00140 PF00356 Bacterial regulatory proteins, lacI family LCH17_00145 PF00294 pfkB family carbohydrate kinase LCH17_00150 PF13407 Periplasmic binding protein domain LCH17_00155 PF02653 Branched-chain amino acid transport system / permease component LCH17_00160 PF00005 ABC transporter LCH17_00165 PF05025 RbsD / FucU transport protein family LCH17_00170 PF13417 Glutathione S-transferase, N-terminal domain LCH17_00185 PF01171 PP-loop family LCH17_00190 PF00582 Universal stress protein family LCH17_00195 PF13545 Crp-like helix-turn-helix domain LCH17_00195 PF00027 Cyclic nucleotide-binding domain LCH17_00210 PF00403 Heavy-metal-associated domain LCH17_00220 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LCH17_00220 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LCH17_00235 PF00115 Cytochrome C and Quinol oxidase polypeptide I LCH17_00245 PF13185 GAF domain LCH17_00250 PF17516 ProQ C-terminal domain LCH17_00250 PF04352 ProQ/FINO family LCH17_00255 PF17804 Tail specific protease N-terminal domain LCH17_00255 PF03572 Peptidase family S41 LCH17_00255 PF00595 PDZ domain LCH17_00255 PF11818 C-terminal domain of tail specific protease (DUF3340) LCH17_00260 PF01433 Peptidase family M1 domain LCH17_00260 PF11940 Domain of unknown function (DUF3458) Ig-like fold LCH17_00260 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LCH17_00270 PF05088 Bacterial NAD-glutamate dehydrogenase LCH17_00275 PF01180 Dihydroorotate dehydrogenase LCH17_00280 PF07126 Cell-division protein ZapC LCH17_00285 PF10672 S-adenosylmethionine-dependent methyltransferase LCH17_00285 PF01170 Putative RNA methylase family UPF0020 LCH17_00285 PF02926 THUMP domain LCH17_00295 PF00005 ABC transporter LCH17_00295 PF16326 ABC transporter C-terminal domain LCH17_00295 PF12848 ABC transporter LCH17_00305 PF04957 Ribosome modulation factor LCH17_00310 PF07977 FabA-like domain LCH17_00315 PF13654 AAA domain LCH17_00315 PF05362 Lon protease (S16) C-terminal proteolytic domain LCH17_00325 PF07130 YebG protein LCH17_00335 PF00106 short chain dehydrogenase LCH17_00360 PF06974 Protein of unknown function (DUF1298) LCH17_00360 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LCH17_00375 PF03972 MmgE/PrpD family LCH17_00380 PF00285 Citrate synthase, C-terminal domain LCH17_00395 PF04403 Paraquat-inducible protein A LCH17_00400 PF02470 MlaD protein LCH17_00405 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF LCH17_00405 PF01189 16S rRNA methyltransferase RsmB/F LCH17_00405 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF LCH17_00415 PF00589 Phage integrase family LCH17_00420 PF01026 TatD related DNase LCH17_00425 PF09115 DNA polymerase III, delta subunit, C terminal LCH17_00430 PF02223 Thymidylate kinase LCH17_00435 PF02618 YceG-like family LCH17_00440 PF01063 Amino-transferase class IV LCH17_00445 PF02801 Beta-ketoacyl synthase, C-terminal domain LCH17_00445 PF00109 Beta-ketoacyl synthase, N-terminal domain LCH17_00450 PF00550 Phosphopantetheine attachment site LCH17_00460 PF00698 Acyl transferase domain LCH17_00465 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LCH17_00465 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LCH17_00470 PF02504 Fatty acid synthesis protein LCH17_00475 PF01783 Ribosomal L32p protein family LCH17_00480 PF02620 Large ribosomal RNA subunit accumulation protein YceD LCH17_00490 PF03466 LysR substrate binding domain LCH17_00490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_00495 PF07690 Major Facilitator Superfamily LCH17_00500 PF02545 Maf-like protein LCH17_00505 PF13419 Haloacid dehalogenase-like hydrolase LCH17_00510 PF01479 S4 domain LCH17_00510 PF00849 RNA pseudouridylate synthase LCH17_00515 PF10150 Ribonuclease E/G family LCH17_00515 PF12111 Polyribonucleotide phosphorylase C terminal LCH17_00515 PF00575 S1 RNA binding domain LCH17_00520 PF01384 Phosphate transporter family LCH17_00525 PF00692 dUTPase LCH17_00530 PF00485 Phosphoribulokinase / Uridine kinase family LCH17_00535 PF10609 NUBPL iron-transfer P-loop NTPase LCH17_00540 PF01588 Putative tRNA binding domain LCH17_00540 PF09334 tRNA synthetases class I (M) LCH17_00540 PF08264 Anticodon-binding domain of tRNA LCH17_00545 PF00043 Glutathione S-transferase, C-terminal domain LCH17_00545 PF02798 Glutathione S-transferase, N-terminal domain LCH17_00550 PF00708 Acylphosphatase LCH17_00555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_00555 PF00672 HAMP domain LCH17_00560 PF10672 S-adenosylmethionine-dependent methyltransferase LCH17_00560 PF17785 PUA-like domain LCH17_00575 PF00586 AIR synthase related protein, N-terminal domain LCH17_00575 PF02769 AIR synthase related protein, C-terminal domain LCH17_00585 PF00753 Metallo-beta-lactamase superfamily LCH17_00590 PF00072 Response regulator receiver domain LCH17_00595 PF00672 HAMP domain LCH17_00595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_00595 PF00512 His Kinase A (phospho-acceptor) domain LCH17_00595 PF01627 Hpt domain LCH17_00595 PF00072 Response regulator receiver domain LCH17_00595 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LCH17_00600 PF01386 Ribosomal L25p family LCH17_00610 PF00271 Helicase conserved C-terminal domain LCH17_00610 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LCH17_00610 PF04408 Helicase associated domain (HA2) LCH17_00610 PF11898 Domain of unknown function (DUF3418) LCH17_00610 PF00270 DEAD/DEAH box helicase LCH17_00615 PF01743 Poly A polymerase head domain LCH17_00615 PF02272 DHHA1 domain LCH17_00615 PF01368 DHH family LCH17_00615 PF00571 CBS domain LCH17_00620 PF00072 Response regulator receiver domain LCH17_00620 PF00196 Bacterial regulatory proteins, luxR family LCH17_00630 PF02575 YbaB/EbfC DNA-binding family LCH17_00635 PF12170 DNA polymerase III tau subunit V interacting with alpha LCH17_00635 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LCH17_00635 PF12169 DNA polymerase III subunits gamma and tau domain III LCH17_00640 PF00156 Phosphoribosyl transferase domain LCH17_00645 PF04304 Protein of unknown function (DUF454) LCH17_00650 PF01207 Dihydrouridine synthase (Dus) LCH17_00660 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH17_00665 PF01612 3'-5' exonuclease LCH17_00665 PF00570 HRDC domain LCH17_00670 PF00501 AMP-binding enzyme LCH17_00670 PF13193 AMP-binding enzyme C-terminal domain LCH17_00675 PF08241 Methyltransferase domain LCH17_00675 PF12697 Alpha/beta hydrolase family LCH17_00685 PF00814 Glycoprotease family LCH17_00690 PF13307 Helicase C-terminal domain LCH17_00690 PF04851 Type III restriction enzyme, res subunit LCH17_00700 PF08029 HisG, C-terminal domain LCH17_00700 PF01634 ATP phosphoribosyltransferase LCH17_00705 PF00815 Histidinol dehydrogenase LCH17_00710 PF00155 Aminotransferase class I and II LCH17_00715 PF08645 Polynucleotide kinase 3 phosphatase LCH17_00715 PF00475 Imidazoleglycerol-phosphate dehydratase LCH17_00720 PF00117 Glutamine amidotransferase class-I LCH17_00725 PF00977 Histidine biosynthesis protein LCH17_00730 PF00072 Response regulator receiver domain LCH17_00735 PF08448 PAS fold LCH17_00735 PF00990 Diguanylate cyclase, GGDEF domain LCH17_00740 PF00512 His Kinase A (phospho-acceptor) domain LCH17_00740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_00740 PF01627 Hpt domain LCH17_00740 PF00072 Response regulator receiver domain LCH17_00745 PF00977 Histidine biosynthesis protein LCH17_00750 PF01502 Phosphoribosyl-AMP cyclohydrolase LCH17_00750 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LCH17_00765 PF00501 AMP-binding enzyme LCH17_00765 PF13193 AMP-binding enzyme C-terminal domain LCH17_00770 PF03606 C4-dicarboxylate anaerobic carrier LCH17_00780 PF05433 Glycine zipper 2TM domain LCH17_00790 PF01799 [2Fe-2S] binding domain LCH17_00790 PF00111 2Fe-2S iron-sulfur cluster binding domain LCH17_00795 PF03450 CO dehydrogenase flavoprotein C-terminal domain LCH17_00795 PF00941 FAD binding domain in molybdopterin dehydrogenase LCH17_00800 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LCH17_00800 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LCH17_00805 PF00860 Permease family LCH17_00810 PF01979 Amidohydrolase family LCH17_00815 PF00860 Permease family LCH17_00820 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LCH17_00820 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LCH17_00820 PF01799 [2Fe-2S] binding domain LCH17_00825 PF00941 FAD binding domain in molybdopterin dehydrogenase LCH17_00830 PF01979 Amidohydrolase family LCH17_00835 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LCH17_00835 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH17_00840 PF12804 MobA-like NTP transferase domain LCH17_00850 PF13478 XdhC Rossmann domain LCH17_00850 PF02625 XdhC and CoxI family LCH17_00855 PF00892 EamA-like transporter family LCH17_00860 PF00696 Amino acid kinase family LCH17_00865 PF01979 Amidohydrolase family LCH17_00870 PF07687 Peptidase dimerisation domain LCH17_00870 PF01546 Peptidase family M20/M25/M40 LCH17_00875 PF00291 Pyridoxal-phosphate dependent enzyme LCH17_00880 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LCH17_00880 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LCH17_00885 PF02954 Bacterial regulatory protein, Fis family LCH17_00885 PF13188 PAS domain LCH17_00885 PF00158 Sigma-54 interaction domain LCH17_00895 PF07152 YaeQ protein LCH17_00905 PF00378 Enoyl-CoA hydratase/isomerase LCH17_00905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LCH17_00905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LCH17_00910 PF00108 Thiolase, N-terminal domain LCH17_00910 PF02803 Thiolase, C-terminal domain LCH17_00915 PF17863 AAA lid domain LCH17_00915 PF07726 ATPase family associated with various cellular activities (AAA) LCH17_00920 PF01882 Protein of unknown function DUF58 LCH17_00945 PF08281 Sigma-70, region 4 LCH17_00945 PF04542 Sigma-70 region 2 LCH17_00955 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LCH17_00960 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LCH17_00965 PF08668 HDOD domain LCH17_00965 PF00563 EAL domain LCH17_00970 PF02803 Thiolase, C-terminal domain LCH17_00970 PF00108 Thiolase, N-terminal domain LCH17_00975 PF09278 MerR, DNA binding LCH17_00975 PF00376 MerR family regulatory protein LCH17_00980 PF00375 Sodium:dicarboxylate symporter family LCH17_00985 PF06865 Pyrimidine/purine nucleoside phosphorylase LCH17_00990 PF03315 Serine dehydratase beta chain LCH17_00990 PF03313 Serine dehydratase alpha chain LCH17_00995 PF03313 Serine dehydratase alpha chain LCH17_00995 PF03315 Serine dehydratase beta chain LCH17_01000 PF13406 Transglycosylase SLT domain LCH17_01005 PF05166 YcgL domain LCH17_01010 PF03775 Septum formation inhibitor MinC, C-terminal domain LCH17_01010 PF05209 Septum formation inhibitor MinC, N-terminal domain LCH17_01015 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LCH17_01020 PF03776 Septum formation topological specificity factor MinE LCH17_01025 PF04269 Protein of unknown function, DUF440 LCH17_01030 PF00912 Transglycosylase LCH17_01035 PF04269 Protein of unknown function, DUF440 LCH17_01045 PF17783 CvfB-like winged helix domain LCH17_01045 PF13509 S1 domain LCH17_01070 PF02525 Flavodoxin-like fold LCH17_01075 PF00892 EamA-like transporter family LCH17_01080 PF02222 ATP-grasp domain LCH17_01080 PF01370 NAD dependent epimerase/dehydratase family LCH17_01085 PF13419 Haloacid dehalogenase-like hydrolase LCH17_01095 PF00677 Lumazine binding domain LCH17_01100 PF06786 Uncharacterised protein family (UPF0253) LCH17_01105 PF01554 MatE LCH17_01135 PF03104 DNA polymerase family B, exonuclease domain LCH17_01135 PF00136 DNA polymerase family B LCH17_01145 PF17151 Periplasmic sensor domain LCH17_01145 PF00990 Diguanylate cyclase, GGDEF domain LCH17_01160 PF03279 Bacterial lipid A biosynthesis acyltransferase LCH17_01165 PF03279 Bacterial lipid A biosynthesis acyltransferase LCH17_01175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_01175 PF03466 LysR substrate binding domain LCH17_01185 PF01261 Xylose isomerase-like TIM barrel LCH17_01190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_01190 PF03466 LysR substrate binding domain LCH17_01200 PF01966 HD domain LCH17_01215 PF00232 Glycosyl hydrolase family 1 LCH17_01220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_01220 PF03466 LysR substrate binding domain LCH17_01225 PF03707 Bacterial signalling protein N terminal repeat LCH17_01225 PF13188 PAS domain LCH17_01225 PF00990 Diguanylate cyclase, GGDEF domain LCH17_01225 PF00563 EAL domain LCH17_01245 PF01925 Sulfite exporter TauE/SafE LCH17_01250 PF13520 Amino acid permease LCH17_01260 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LCH17_01260 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LCH17_01265 PF00378 Enoyl-CoA hydratase/isomerase LCH17_01270 PF00378 Enoyl-CoA hydratase/isomerase LCH17_01275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCH17_01275 PF02770 Acyl-CoA dehydrogenase, middle domain LCH17_01275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCH17_01280 PF00171 Aldehyde dehydrogenase family LCH17_01285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCH17_01285 PF02770 Acyl-CoA dehydrogenase, middle domain LCH17_01285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCH17_01290 PF01039 Carboxyl transferase domain LCH17_01295 PF00378 Enoyl-CoA hydratase/isomerase LCH17_01300 PF02785 Biotin carboxylase C-terminal domain LCH17_01300 PF00289 Biotin carboxylase, N-terminal domain LCH17_01300 PF00364 Biotin-requiring enzyme LCH17_01300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LCH17_01305 PF00682 HMGL-like LCH17_01310 PF09278 MerR, DNA binding LCH17_01310 PF00376 MerR family regulatory protein LCH17_01325 PF01184 GPR1/FUN34/yaaH family LCH17_01330 PF06167 Glucose-regulated metallo-peptidase M90 LCH17_01340 PF01235 Sodium:alanine symporter family LCH17_01380 PF00378 Enoyl-CoA hydratase/isomerase LCH17_01395 PF04341 Protein of unknown function, DUF485 LCH17_01400 PF00474 Sodium:solute symporter family LCH17_01510 PF00665 Integrase core domain LCH17_01515 PF01695 IstB-like ATP binding protein LCH17_01550 PF00816 H-NS histone family LCH17_01560 PF00717 Peptidase S24-like LCH17_01565 PF11798 IMS family HHH motif LCH17_01565 PF00817 impB/mucB/samB family LCH17_01565 PF13438 Domain of unknown function (DUF4113) LCH17_01565 PF11799 impB/mucB/samB family C-terminal domain LCH17_01570 PF01338 Bacillus thuringiensis toxin LCH17_01590 PF05772 NinB protein LCH17_01605 PF01939 Endonuclease NucS LCH17_01715 PF01695 IstB-like ATP binding protein LCH17_01720 PF00665 Integrase core domain LCH17_01725 PF12167 Arm DNA-binding domain LCH17_01725 PF00589 Phage integrase family LCH17_01730 PF00005 ABC transporter LCH17_01730 PF12848 ABC transporter LCH17_01735 PF13145 PPIC-type PPIASE domain LCH17_01740 PF00216 Bacterial DNA-binding protein LCH17_01745 PF00004 ATPase family associated with various cellular activities (AAA) LCH17_01745 PF05362 Lon protease (S16) C-terminal proteolytic domain LCH17_01745 PF02190 ATP-dependent protease La (LON) substrate-binding domain LCH17_01750 PF07724 AAA domain (Cdc48 subfamily) LCH17_01750 PF10431 C-terminal, D2-small domain, of ClpB protein LCH17_01750 PF06689 ClpX C4-type zinc finger LCH17_01755 PF00574 Clp protease LCH17_01760 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCH17_01760 PF05697 Bacterial trigger factor protein (TF) LCH17_01760 PF05698 Bacterial trigger factor protein (TF) C-terminus LCH17_01775 PF12704 MacB-like periplasmic core domain LCH17_01775 PF02687 FtsX-like permease family LCH17_01780 PF00005 ABC transporter LCH17_01785 PF12704 MacB-like periplasmic core domain LCH17_01785 PF02687 FtsX-like permease family LCH17_01795 PF02559 CarD-like/TRCF domain LCH17_01795 PF00270 DEAD/DEAH box helicase LCH17_01795 PF00271 Helicase conserved C-terminal domain LCH17_01795 PF03461 TRCF domain LCH17_01795 PF17757 UvrB interaction domain LCH17_01800 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LCH17_01805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCH17_01810 PF00892 EamA-like transporter family LCH17_01820 PF00300 Histidine phosphatase superfamily (branch 1) LCH17_01825 PF00675 Insulinase (Peptidase family M16) LCH17_01825 PF05193 Peptidase M16 inactive domain LCH17_01830 PF05724 Thiopurine S-methyltransferase (TPMT) LCH17_01845 PF12833 Helix-turn-helix domain LCH17_01845 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LCH17_01845 PF02805 Metal binding domain of Ada LCH17_01845 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LCH17_01860 PF00958 GMP synthase C terminal domain LCH17_01860 PF00117 Glutamine amidotransferase class-I LCH17_01860 PF02540 NAD synthase LCH17_01865 PF00478 IMP dehydrogenase / GMP reductase domain LCH17_01865 PF00571 CBS domain LCH17_01870 PF02705 K+ potassium transporter LCH17_01880 PF01618 MotA/TolQ/ExbB proton channel family LCH17_01885 PF02472 Biopolymer transport protein ExbD/TolR LCH17_01890 PF00892 EamA-like transporter family LCH17_01895 PF02601 Exonuclease VII, large subunit LCH17_01895 PF13742 OB-fold nucleic acid binding domain LCH17_01900 PF04055 Radical SAM superfamily LCH17_01905 PF00672 HAMP domain LCH17_01905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_01910 PF00793 DAHP synthetase I family LCH17_01915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LCH17_01920 PF00266 Aminotransferase class-V LCH17_01925 PF01012 Electron transfer flavoprotein domain LCH17_01925 PF00766 Electron transfer flavoprotein FAD-binding domain LCH17_01930 PF01012 Electron transfer flavoprotein domain LCH17_01940 PF01544 CorA-like Mg2+ transporter protein LCH17_01945 PF11143 Protein of unknown function (DUF2919) LCH17_01960 PF07715 TonB-dependent Receptor Plug Domain LCH17_01960 PF00593 TonB dependent receptor LCH17_01965 PF01032 FecCD transport family LCH17_01970 PF01032 FecCD transport family LCH17_01975 PF00005 ABC transporter LCH17_01980 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LCH17_01980 PF01648 4'-phosphopantetheinyl transferase superfamily LCH17_01985 PF01497 Periplasmic binding protein LCH17_01990 PF14765 Polyketide synthase dehydratase LCH17_01990 PF00550 Phosphopantetheine attachment site LCH17_01990 PF08659 KR domain LCH17_01990 PF02801 Beta-ketoacyl synthase, C-terminal domain LCH17_01990 PF00668 Condensation domain LCH17_01990 PF13193 AMP-binding enzyme C-terminal domain LCH17_01990 PF00501 AMP-binding enzyme LCH17_01990 PF00109 Beta-ketoacyl synthase, N-terminal domain LCH17_01990 PF16197 Ketoacyl-synthetase C-terminal extension LCH17_01995 PF00501 AMP-binding enzyme LCH17_01995 PF13193 AMP-binding enzyme C-terminal domain LCH17_01995 PF00668 Condensation domain LCH17_01995 PF07993 Male sterility protein LCH17_01995 PF00550 Phosphopantetheine attachment site LCH17_02005 PF00501 AMP-binding enzyme LCH17_02005 PF13193 AMP-binding enzyme C-terminal domain LCH17_02005 PF00668 Condensation domain LCH17_02005 PF00550 Phosphopantetheine attachment site LCH17_02005 PF00975 Thioesterase domain LCH17_02010 PF00550 Phosphopantetheine attachment site LCH17_02010 PF00857 Isochorismatase family LCH17_02015 PF13193 AMP-binding enzyme C-terminal domain LCH17_02015 PF00501 AMP-binding enzyme LCH17_02020 PF00425 chorismate binding enzyme LCH17_02025 PF07273 Protein of unknown function (DUF1439) LCH17_02035 PF00483 Nucleotidyl transferase LCH17_02040 PF00990 Diguanylate cyclase, GGDEF domain LCH17_02040 PF03707 Bacterial signalling protein N terminal repeat LCH17_02040 PF00563 EAL domain LCH17_02055 PF00294 pfkB family carbohydrate kinase LCH17_02065 PF00762 Ferrochelatase LCH17_02070 PF05191 Adenylate kinase, active site lid LCH17_02075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_02075 PF00183 Hsp90 protein LCH17_02080 PF13662 Toprim domain LCH17_02080 PF02132 RecR protein LCH17_02085 PF02634 FdhD/NarQ family LCH17_02090 PF02954 Bacterial regulatory protein, Fis family LCH17_02090 PF00158 Sigma-54 interaction domain LCH17_02090 PF01590 GAF domain LCH17_02105 PF13247 4Fe-4S dicluster domain LCH17_02105 PF12800 4Fe-4S binding domain LCH17_02115 PF02705 K+ potassium transporter LCH17_02120 PF00037 4Fe-4S binding domain LCH17_02120 PF12798 4Fe-4S binding domain LCH17_02125 PF00361 Proton-conducting membrane transporter LCH17_02130 PF00146 NADH dehydrogenase LCH17_02135 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LCH17_02135 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LCH17_02135 PF00374 Nickel-dependent hydrogenase LCH17_02140 PF12838 4Fe-4S dicluster domain LCH17_02145 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LCH17_02150 PF07450 Formate hydrogenlyase maturation protein HycH LCH17_02155 PF01750 Hydrogenase maturation protease LCH17_02165 PF12390 Selenocysteine synthase N terminal LCH17_02165 PF03841 L-seryl-tRNA selenium transferase LCH17_02170 PF00009 Elongation factor Tu GTP binding domain LCH17_02170 PF03144 Elongation factor Tu domain 2 LCH17_02170 PF09105 Elongation factor SelB, winged helix LCH17_02170 PF09106 Elongation factor SelB, winged helix LCH17_02170 PF09107 Elongation factor SelB, winged helix LCH17_02175 PF00708 Acylphosphatase LCH17_02175 PF17788 HypF Kae1-like domain LCH17_02175 PF01300 Telomere recombination LCH17_02175 PF07503 HypF finger LCH17_02180 PF01455 HupF/HypC family LCH17_02185 PF01924 Hydrogenase formation hypA family LCH17_02190 PF00586 AIR synthase related protein, N-terminal domain LCH17_02190 PF02769 AIR synthase related protein, C-terminal domain LCH17_02195 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LCH17_02205 PF02492 CobW/HypB/UreG, nucleotide-binding domain LCH17_02210 PF08402 TOBE domain LCH17_02210 PF00005 ABC transporter LCH17_02215 PF00005 ABC transporter LCH17_02215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCH17_02220 PF12911 N-terminal TM domain of oligopeptide transport permease C LCH17_02220 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_02225 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_02230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCH17_02235 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE LCH17_02240 PF01750 Hydrogenase maturation protease LCH17_02245 PF00374 Nickel-dependent hydrogenase LCH17_02250 PF03916 Polysulphide reductase, NrfD LCH17_02255 PF13247 4Fe-4S dicluster domain LCH17_02260 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LCH17_02260 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LCH17_02265 PF00072 Response regulator receiver domain LCH17_02275 PF01627 Hpt domain LCH17_02275 PF02895 Signal transducing histidine kinase, homodimeric domain LCH17_02275 PF01584 CheW-like domain LCH17_02275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_02275 PF09078 CheY binding LCH17_02280 PF12729 Four helix bundle sensory module for signal transduction LCH17_02280 PF00672 HAMP domain LCH17_02280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_02285 PF01584 CheW-like domain LCH17_02290 PF01739 CheR methyltransferase, SAM binding domain LCH17_02290 PF03705 CheR methyltransferase, all-alpha domain LCH17_02295 PF01339 CheB methylesterase LCH17_02295 PF00072 Response regulator receiver domain LCH17_02300 PF00563 EAL domain LCH17_02300 PF00990 Diguanylate cyclase, GGDEF domain LCH17_02300 PF03707 Bacterial signalling protein N terminal repeat LCH17_02305 PF12729 Four helix bundle sensory module for signal transduction LCH17_02305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_02305 PF00672 HAMP domain LCH17_02310 PF00842 Alanine racemase, C-terminal domain LCH17_02310 PF01168 Alanine racemase, N-terminal domain LCH17_02330 PF01740 STAS domain LCH17_02330 PF00916 Sulfate permease family LCH17_02345 PF03350 Uncharacterized protein family, UPF0114 LCH17_02360 PF03239 Iron permease FTR1 family LCH17_02365 PF01593 Flavin containing amine oxidoreductase LCH17_02380 PF07690 Major Facilitator Superfamily LCH17_02390 PF00005 ABC transporter LCH17_02395 PF02687 FtsX-like permease family LCH17_02395 PF12704 MacB-like periplasmic core domain LCH17_02420 PF02913 FAD linked oxidases, C-terminal domain LCH17_02420 PF01565 FAD binding domain LCH17_02425 PF02589 LUD domain LCH17_02430 PF02589 LUD domain LCH17_02430 PF13183 4Fe-4S dicluster domain LCH17_02430 PF11870 Domain of unknown function (DUF3390) LCH17_02435 PF02754 Cysteine-rich domain LCH17_02440 PF02652 L-lactate permease LCH17_02445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_02445 PF03466 LysR substrate binding domain LCH17_02455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCH17_02460 PF00561 alpha/beta hydrolase fold LCH17_02480 PF01625 Peptide methionine sulfoxide reductase LCH17_02485 PF00583 Acetyltransferase (GNAT) family LCH17_02485 PF00696 Amino acid kinase family LCH17_02490 PF01842 ACT domain LCH17_02490 PF00696 Amino acid kinase family LCH17_02500 PF00884 Sulfatase LCH17_02505 PF02016 LD-carboxypeptidase N-terminal domain LCH17_02505 PF17676 LD-carboxypeptidase C-terminal domain LCH17_02510 PF01734 Patatin-like phospholipase LCH17_02515 PF17179 4Fe-4S dicluster domain LCH17_02520 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LCH17_02520 PF00175 Oxidoreductase NAD-binding domain LCH17_02525 PF13187 4Fe-4S dicluster domain LCH17_02525 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LCH17_02525 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LCH17_02530 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCH17_02530 PF14824 Sirohaem biosynthesis protein central LCH17_02530 PF10414 Sirohaem synthase dimerisation region LCH17_02540 PF01906 Putative heavy-metal-binding LCH17_02560 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH17_02565 PF05728 Uncharacterised protein family (UPF0227) LCH17_02570 PF00860 Permease family LCH17_02575 PF08439 Oligopeptidase F LCH17_02575 PF01432 Peptidase family M3 LCH17_02580 PF01432 Peptidase family M3 LCH17_02580 PF08439 Oligopeptidase F LCH17_02585 PF05661 Protein of unknown function (DUF808) LCH17_02595 PF07549 SecD/SecF GG Motif LCH17_02595 PF02355 Protein export membrane protein LCH17_02600 PF07549 SecD/SecF GG Motif LCH17_02600 PF13721 SecD export protein N-terminal TM region LCH17_02600 PF02355 Protein export membrane protein LCH17_02635 PF01230 HIT domain LCH17_02640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_02640 PF00672 HAMP domain LCH17_02650 PF01979 Amidohydrolase family LCH17_02665 PF00375 Sodium:dicarboxylate symporter family LCH17_02670 PF04191 Phospholipid methyltransferase LCH17_02675 PF00842 Alanine racemase, C-terminal domain LCH17_02675 PF01168 Alanine racemase, N-terminal domain LCH17_02680 PF03741 Integral membrane protein TerC family LCH17_02685 PF00005 ABC transporter LCH17_02685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCH17_02690 PF00005 ABC transporter LCH17_02690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCH17_02695 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_02695 PF12911 N-terminal TM domain of oligopeptide transport permease C LCH17_02700 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_02705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCH17_02710 PF01914 MarC family integral membrane protein LCH17_02720 PF00171 Aldehyde dehydrogenase family LCH17_02720 PF00465 Iron-containing alcohol dehydrogenase LCH17_02725 PF01966 HD domain LCH17_02730 PF07694 5TMR of 5TMR-LYT LCH17_02730 PF06580 Histidine kinase LCH17_02735 PF04397 LytTr DNA-binding domain LCH17_02735 PF00072 Response regulator receiver domain LCH17_02740 PF02554 Carbon starvation protein CstA LCH17_02745 PF11742 Protein of unknown function (DUF3302) LCH17_02750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCH17_02750 PF00529 HlyD membrane-fusion protein of T1SS LCH17_02755 PF04851 Type III restriction enzyme, res subunit LCH17_02755 PF00271 Helicase conserved C-terminal domain LCH17_02760 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LCH17_02765 PF00462 Glutaredoxin LCH17_02775 PF00155 Aminotransferase class I and II LCH17_02780 PF03606 C4-dicarboxylate anaerobic carrier LCH17_02785 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LCH17_02785 PF12241 Trans-2-enoyl-CoA reductase catalytic region LCH17_02785 PF07055 Enoyl reductase FAD binding domain LCH17_02835 PF04229 GrpB protein LCH17_02875 PF10124 Mu-like prophage major head subunit gpT LCH17_02880 PF10123 Mu-like prophage I protein LCH17_02910 PF06074 Protein of unknown function (DUF935) LCH17_02915 PF03237 Terminase-like family LCH17_02920 PF11985 Protein of unknown function (DUF3486) LCH17_02925 PF08461 Ribonuclease R winged-helix domain LCH17_02965 PF08765 Mor transcription activator family LCH17_03035 PF01381 Helix-turn-helix LCH17_03035 PF00717 Peptidase S24-like LCH17_03055 PF00892 EamA-like transporter family LCH17_03060 PF02508 Rnf-Nqr subunit, membrane protein LCH17_03065 PF04060 Putative Fe-S cluster LCH17_03070 PF13375 RnfC Barrel sandwich hybrid domain LCH17_03070 PF12838 4Fe-4S dicluster domain LCH17_03070 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LCH17_03070 PF10531 SLBB domain LCH17_03075 PF03116 NQR2, RnfD, RnfE family LCH17_03080 PF04205 FMN-binding domain LCH17_03085 PF02508 Rnf-Nqr subunit, membrane protein LCH17_03090 PF10576 Iron-sulfur binding domain of endonuclease III LCH17_03090 PF00633 Helix-hairpin-helix motif LCH17_03090 PF00730 HhH-GPD superfamily base excision DNA repair protein LCH17_03095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCH17_03100 PF18393 MotY N-terminal domain LCH17_03100 PF00691 OmpA family LCH17_03105 PF12729 Four helix bundle sensory module for signal transduction LCH17_03105 PF00672 HAMP domain LCH17_03105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_03110 PF00929 Exonuclease LCH17_03115 PF13726 Na+-H+ antiporter family LCH17_03115 PF03553 Na+/H+ antiporter family LCH17_03120 PF00271 Helicase conserved C-terminal domain LCH17_03120 PF00270 DEAD/DEAH box helicase LCH17_03120 PF03880 DbpA RNA binding domain LCH17_03125 PF03061 Thioesterase superfamily LCH17_03135 PF13183 4Fe-4S dicluster domain LCH17_03135 PF01565 FAD binding domain LCH17_03135 PF02913 FAD linked oxidases, C-terminal domain LCH17_03145 PF03471 Transporter associated domain LCH17_03145 PF03741 Integral membrane protein TerC family LCH17_03150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LCH17_03155 PF00962 Adenosine/AMP deaminase LCH17_03160 PF13344 Haloacid dehalogenase-like hydrolase LCH17_03165 PF00999 Sodium/hydrogen exchanger family LCH17_03165 PF02254 TrkA-N domain LCH17_03175 PF13537 Glutamine amidotransferase domain LCH17_03175 PF00733 Asparagine synthase LCH17_03185 PF13417 Glutathione S-transferase, N-terminal domain LCH17_03185 PF00043 Glutathione S-transferase, C-terminal domain LCH17_03190 PF02798 Glutathione S-transferase, N-terminal domain LCH17_03190 PF14497 Glutathione S-transferase, C-terminal domain LCH17_03200 PF04209 homogentisate 1,2-dioxygenase LCH17_03205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCH17_03215 PF00849 RNA pseudouridylate synthase LCH17_03220 PF00990 Diguanylate cyclase, GGDEF domain LCH17_03220 PF13185 GAF domain LCH17_03225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_03225 PF08447 PAS fold LCH17_03235 PF09924 Uncharacterised conserved protein (DUF2156) LCH17_03235 PF03706 Lysylphosphatidylglycerol synthase TM region LCH17_03240 PF08019 Phosphoethanolamine transferase EptA/EptB LCH17_03240 PF00884 Sulfatase LCH17_03260 PF01027 Inhibitor of apoptosis-promoting Bax1 LCH17_03265 PF12805 FUSC-like inner membrane protein yccS LCH17_03270 PF04358 DsrC like protein LCH17_03275 PF05036 Sporulation related domain LCH17_03280 PF08245 Mur ligase middle domain LCH17_03280 PF02875 Mur ligase family, glutamate ligase domain LCH17_03285 PF01039 Carboxyl transferase domain LCH17_03285 PF17848 Acetyl-coA carboxylase zinc finger domain LCH17_03290 PF01416 tRNA pseudouridine synthase LCH17_03300 PF01118 Semialdehyde dehydrogenase, NAD binding domain LCH17_03300 PF02774 Semialdehyde dehydrogenase, dimerisation domain LCH17_03305 PF11890 Domain of unknown function (DUF3410) LCH17_03305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCH17_03305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LCH17_03310 PF01569 PAP2 superfamily LCH17_03315 PF03180 NLPA lipoprotein LCH17_03325 PF01483 Proprotein convertase P-domain LCH17_03325 PF00082 Subtilase family LCH17_03335 PF01915 Glycosyl hydrolase family 3 C-terminal domain LCH17_03335 PF14310 Fibronectin type III-like domain LCH17_03335 PF00933 Glycosyl hydrolase family 3 N terminal domain LCH17_03345 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LCH17_03345 PF00391 PEP-utilising enzyme, mobile domain LCH17_03345 PF02896 PEP-utilising enzyme, TIM barrel domain LCH17_03350 PF03618 Kinase/pyrophosphorylase LCH17_03360 PF00324 Amino acid permease LCH17_03405 PF03412 Peptidase C39 family LCH17_03405 PF00664 ABC transporter transmembrane region LCH17_03405 PF00005 ABC transporter LCH17_03410 PF04055 Radical SAM superfamily LCH17_03410 PF16199 Radical_SAM C-terminal domain LCH17_03415 PF00310 Glutamine amidotransferases class-II LCH17_03415 PF01493 GXGXG motif LCH17_03415 PF01645 Conserved region in glutamate synthase LCH17_03415 PF04898 Glutamate synthase central domain LCH17_03420 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH17_03420 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LCH17_03425 PF00005 ABC transporter LCH17_03430 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_03435 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH17_03450 PF09278 MerR, DNA binding LCH17_03450 PF00376 MerR family regulatory protein LCH17_03465 PF14521 Lysine-specific metallo-endopeptidase LCH17_03475 PF00271 Helicase conserved C-terminal domain LCH17_03475 PF00270 DEAD/DEAH box helicase LCH17_03480 PF13302 Acetyltransferase (GNAT) domain LCH17_03505 PF07759 Protein of unknown function (DUF1615) LCH17_03510 PF08502 LeuA allosteric (dimerisation) domain LCH17_03510 PF00682 HMGL-like LCH17_03515 PF02142 MGS-like domain LCH17_03515 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LCH17_03515 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LCH17_03520 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LCH17_03520 PF00117 Glutamine amidotransferase class-I LCH17_03525 PF05173 Dihydrodipicolinate reductase, C-terminus LCH17_03525 PF01113 Dihydrodipicolinate reductase, N-terminus LCH17_03535 PF01812 5-formyltetrahydrofolate cyclo-ligase family LCH17_03540 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LCH17_03545 PF01842 ACT domain LCH17_03545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCH17_03545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LCH17_03550 PF01219 Prokaryotic diacylglycerol kinase LCH17_03555 PF00793 DAHP synthetase I family LCH17_03560 PF00583 Acetyltransferase (GNAT) family LCH17_03565 PF00005 ABC transporter LCH17_03570 PF01032 FecCD transport family LCH17_03575 PF00989 PAS fold LCH17_03575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_03575 PF00512 His Kinase A (phospho-acceptor) domain LCH17_03575 PF01627 Hpt domain LCH17_03575 PF00072 Response regulator receiver domain LCH17_03575 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH17_03585 PF00437 Type II/IV secretion system protein LCH17_03590 PF00483 Nucleotidyl transferase LCH17_03605 PF07670 Nucleoside recognition LCH17_03605 PF02421 Ferrous iron transport protein B LCH17_03605 PF07664 Ferrous iron transport protein B C terminus LCH17_03615 PF01253 Translation initiation factor SUI1 LCH17_03620 PF01169 Uncharacterized protein family UPF0016 LCH17_03650 PF00990 Diguanylate cyclase, GGDEF domain LCH17_03650 PF13185 GAF domain LCH17_03665 PF00271 Helicase conserved C-terminal domain LCH17_03670 PF01406 tRNA synthetases class I (C) catalytic domain LCH17_03670 PF09190 DALR domain LCH17_03675 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LCH17_03685 PF00149 Calcineurin-like phosphoesterase LCH17_03690 PF03916 Polysulphide reductase, NrfD LCH17_03695 PF00037 4Fe-4S binding domain LCH17_03695 PF13247 4Fe-4S dicluster domain LCH17_03715 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) LCH17_03720 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB LCH17_03725 PF00672 HAMP domain LCH17_03725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_03730 PF13426 PAS domain LCH17_03730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_03730 PF08447 PAS fold LCH17_03750 PF01066 CDP-alcohol phosphatidyltransferase LCH17_03755 PF08459 UvrC Helix-hairpin-helix N-terminal LCH17_03755 PF02151 UvrB/uvrC motif LCH17_03755 PF01541 GIY-YIG catalytic domain LCH17_03760 PF00072 Response regulator receiver domain LCH17_03760 PF00196 Bacterial regulatory proteins, luxR family LCH17_03765 PF02348 Cytidylyltransferase LCH17_03770 PF03966 Trm112p-like protein LCH17_03775 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LCH17_03780 PF00664 ABC transporter transmembrane region LCH17_03780 PF00005 ABC transporter LCH17_03785 PF03772 Competence protein LCH17_03785 PF00753 Metallo-beta-lactamase superfamily LCH17_03800 PF05872 Bacterial protein of unknown function (DUF853) LCH17_03805 PF00155 Aminotransferase class I and II LCH17_03815 PF13609 Gram-negative porin LCH17_03820 PF06733 DEAD_2 LCH17_03820 PF13307 Helicase C-terminal domain LCH17_03830 PF00850 Histone deacetylase domain LCH17_03835 PF07690 Major Facilitator Superfamily LCH17_03840 PF01926 50S ribosome-binding GTPase LCH17_03845 PF00245 Alkaline phosphatase LCH17_03850 PF00245 Alkaline phosphatase LCH17_03865 PF01272 Transcription elongation factor, GreA/GreB, C-term LCH17_03865 PF14760 Rnk N-terminus LCH17_03870 PF00072 Response regulator receiver domain LCH17_03870 PF00196 Bacterial regulatory proteins, luxR family LCH17_03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_03875 PF07730 Histidine kinase LCH17_03875 PF05231 MASE1 LCH17_03880 PF07690 Major Facilitator Superfamily LCH17_03885 PF00990 Diguanylate cyclase, GGDEF domain LCH17_03885 PF08448 PAS fold LCH17_03890 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH17_03895 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_03900 PF00005 ABC transporter LCH17_03915 PF04116 Fatty acid hydroxylase superfamily LCH17_03920 PF13520 Amino acid permease LCH17_03935 PF03471 Transporter associated domain LCH17_03935 PF00571 CBS domain LCH17_03935 PF01595 Cyclin M transmembrane N-terminal domain LCH17_03940 PF01895 PhoU domain LCH17_03945 PF00005 ABC transporter LCH17_03950 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_03955 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_03960 PF14437 MafB19-like deaminase LCH17_03975 PF01274 Malate synthase LCH17_03980 PF00463 Isocitrate lyase family LCH17_03985 PF00308 Bacterial dnaA protein LCH17_04000 PF00586 AIR synthase related protein, N-terminal domain LCH17_04000 PF02769 AIR synthase related protein, C-terminal domain LCH17_04005 PF00551 Formyl transferase LCH17_04010 PF01784 NIF3 (NGG1p interacting factor 3) LCH17_04015 PF00072 Response regulator receiver domain LCH17_04015 PF00158 Sigma-54 interaction domain LCH17_04015 PF02954 Bacterial regulatory protein, Fis family LCH17_04020 PF13188 PAS domain LCH17_04020 PF00512 His Kinase A (phospho-acceptor) domain LCH17_04020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_04025 PF00158 Sigma-54 interaction domain LCH17_04025 PF06490 Flagellar regulatory protein FleQ LCH17_04025 PF02954 Bacterial regulatory protein, Fis family LCH17_04035 PF01842 ACT domain LCH17_04040 PF13089 Polyphosphate kinase N-terminal domain LCH17_04040 PF13090 Polyphosphate kinase C-terminal domain 2 LCH17_04040 PF02503 Polyphosphate kinase middle domain LCH17_04040 PF17941 Polyphosphate kinase C-terminal domain 1 LCH17_04045 PF02541 Ppx/GppA phosphatase family LCH17_04050 PF01769 Divalent cation transporter LCH17_04050 PF03448 MgtE intracellular N domain LCH17_04050 PF00571 CBS domain LCH17_04055 PF00669 Bacterial flagellin N-terminal helical region LCH17_04060 PF00460 Flagella basal body rod protein LCH17_04060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCH17_04065 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LCH17_04065 PF10135 Rod binding protein LCH17_04070 PF02119 Flagellar P-ring protein LCH17_04075 PF02107 Flagellar L-ring protein LCH17_04080 PF00460 Flagella basal body rod protein LCH17_04080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCH17_04085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCH17_04085 PF00460 Flagella basal body rod protein LCH17_04090 PF07559 Flagellar basal body protein FlaE LCH17_04090 PF00460 Flagella basal body rod protein LCH17_04090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCH17_04100 PF00460 Flagella basal body rod protein LCH17_04100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCH17_04105 PF00460 Flagella basal body rod protein LCH17_04110 PF01739 CheR methyltransferase, SAM binding domain LCH17_04110 PF03705 CheR methyltransferase, all-alpha domain LCH17_04115 PF01584 CheW-like domain LCH17_04115 PF00072 Response regulator receiver domain LCH17_04120 PF13144 Chaperone for flagella basal body P-ring formation LCH17_04135 PF12850 Calcineurin-like phosphoesterase superfamily domain LCH17_04140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCH17_04150 PF00849 RNA pseudouridylate synthase LCH17_04150 PF01479 S4 domain LCH17_04155 PF11871 Domain of unknown function (DUF3391) LCH17_04155 PF01966 HD domain LCH17_04165 PF00923 Transaldolase/Fructose-6-phosphate aldolase LCH17_04170 PF04055 Radical SAM superfamily LCH17_04175 PF01228 Glycine radical LCH17_04175 PF02901 Pyruvate formate lyase-like LCH17_04180 PF00455 DeoR C terminal sensor domain LCH17_04180 PF08220 DeoR-like helix-turn-helix domain LCH17_04185 PF00892 EamA-like transporter family LCH17_04190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCH17_04215 PF00313 'Cold-shock' DNA-binding domain LCH17_04220 PF02817 e3 binding domain LCH17_04220 PF00364 Biotin-requiring enzyme LCH17_04220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LCH17_04225 PF02779 Transketolase, pyrimidine binding domain LCH17_04225 PF02780 Transketolase, C-terminal domain LCH17_04230 PF00676 Dehydrogenase E1 component LCH17_04235 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LCH17_04245 PF05472 DNA replication terminus site-binding protein (Ter protein) LCH17_04250 PF04434 SWIM zinc finger LCH17_04250 PF00271 Helicase conserved C-terminal domain LCH17_04250 PF00176 SNF2 family N-terminal domain LCH17_04255 PF04337 Protein of unknown function, DUF480 LCH17_04265 PF06082 Exopolysaccharide biosynthesis protein YbjH LCH17_04285 PF13614 AAA domain LCH17_04285 PF13807 G-rich domain on putative tyrosine kinase LCH17_04285 PF02706 Chain length determinant protein LCH17_04295 PF02706 Chain length determinant protein LCH17_04305 PF02719 Polysaccharide biosynthesis protein LCH17_04310 PF02397 Bacterial sugar transferase LCH17_04315 PF01370 NAD dependent epimerase/dehydratase family LCH17_04325 PF02350 UDP-N-acetylglucosamine 2-epimerase LCH17_04330 PF04321 RmlD substrate binding domain LCH17_04335 PF08485 Polysaccharide biosynthesis protein C-terminal LCH17_04335 PF02719 Polysaccharide biosynthesis protein LCH17_04365 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LCH17_04380 PF05523 WxcM-like, C-terminal LCH17_04385 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LCH17_04390 PF00483 Nucleotidyl transferase LCH17_04395 PF04321 RmlD substrate binding domain LCH17_04400 PF16363 GDP-mannose 4,6 dehydratase LCH17_04405 PF02321 Outer membrane efflux protein LCH17_04410 PF00873 AcrB/AcrD/AcrF family LCH17_04415 PF00529 HlyD membrane-fusion protein of T1SS LCH17_04415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCH17_04420 PF08361 MAATS-type transcriptional repressor, C-terminal region LCH17_04420 PF00440 Bacterial regulatory proteins, tetR family LCH17_04440 PF00849 RNA pseudouridylate synthase LCH17_04440 PF01479 S4 domain LCH17_04445 PF04079 Segregation and condensation complex subunit ScpB LCH17_04450 PF02616 Segregation and condensation protein ScpA LCH17_04455 PF01300 Telomere recombination LCH17_04460 PF02811 PHP domain LCH17_04465 PF04715 Anthranilate synthase component I, N terminal region LCH17_04465 PF00425 chorismate binding enzyme LCH17_04470 PF00117 Glutamine amidotransferase class-I LCH17_04470 PF02885 Glycosyl transferase family, helical bundle domain LCH17_04470 PF00591 Glycosyl transferase family, a/b domain LCH17_04475 PF02885 Glycosyl transferase family, helical bundle domain LCH17_04475 PF00591 Glycosyl transferase family, a/b domain LCH17_04480 PF00218 Indole-3-glycerol phosphate synthase LCH17_04480 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LCH17_04485 PF00291 Pyridoxal-phosphate dependent enzyme LCH17_04490 PF00290 Tryptophan synthase alpha chain LCH17_04505 PF04307 LexA-binding, inner membrane-associated putative hydrolase LCH17_04525 PF07662 Na+ dependent nucleoside transporter C-terminus LCH17_04525 PF07670 Nucleoside recognition LCH17_04525 PF01773 Na+ dependent nucleoside transporter N-terminus LCH17_04535 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LCH17_04540 PF00005 ABC transporter LCH17_04545 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_04550 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LCH17_04560 PF07690 Major Facilitator Superfamily LCH17_04565 PF01040 UbiA prenyltransferase family LCH17_04570 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LCH17_04575 PF00510 Cytochrome c oxidase subunit III LCH17_04580 PF00115 Cytochrome C and Quinol oxidase polypeptide I LCH17_04585 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LCH17_04585 PF06481 COX Aromatic Rich Motif LCH17_04595 PF00034 Cytochrome c LCH17_04595 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LCH17_04605 PF01156 Inosine-uridine preferring nucleoside hydrolase LCH17_04620 PF00127 Copper binding proteins, plastocyanin/azurin family LCH17_04625 PF02424 ApbE family LCH17_04630 PF07690 Major Facilitator Superfamily LCH17_04645 PF03372 Endonuclease/Exonuclease/phosphatase family LCH17_04650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCH17_04655 PF00873 AcrB/AcrD/AcrF family LCH17_04665 PF00529 HlyD membrane-fusion protein of T1SS LCH17_04665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCH17_04670 PF00873 AcrB/AcrD/AcrF family LCH17_04690 PF03099 Biotin/lipoate A/B protein ligase family LCH17_04690 PF10437 Bacterial lipoate protein ligase C-terminus LCH17_04695 PF03707 Bacterial signalling protein N terminal repeat LCH17_04695 PF00990 Diguanylate cyclase, GGDEF domain LCH17_04695 PF00563 EAL domain LCH17_04700 PF00873 AcrB/AcrD/AcrF family LCH17_04715 PF04143 Sulphur transport LCH17_04730 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH17_04740 PF02308 MgtC family LCH17_04745 PF00226 DnaJ domain LCH17_04745 PF01556 DnaJ C terminal domain LCH17_04745 PF00684 DnaJ central domain LCH17_04750 PF00012 Hsp70 protein LCH17_04755 PF01025 GrpE LCH17_04760 PF01513 ATP-NAD kinase LCH17_04765 PF02463 RecF/RecN/SMC N terminal domain LCH17_04770 PF01368 DHH family LCH17_04770 PF02833 DHHA2 domain LCH17_04780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCH17_04785 PF12704 MacB-like periplasmic core domain LCH17_04785 PF00005 ABC transporter LCH17_04785 PF02687 FtsX-like permease family LCH17_04790 PF02321 Outer membrane efflux protein LCH17_04795 PF08021 Siderophore-interacting FAD-binding domain LCH17_04795 PF04954 Siderophore-interacting protein LCH17_04800 PF00793 DAHP synthetase I family LCH17_04810 PF00816 H-NS histone family LCH17_04825 PF05656 Protein of unknown function (DUF805) LCH17_04845 PF01266 FAD dependent oxidoreductase LCH17_04850 PF01381 Helix-turn-helix LCH17_04850 PF07883 Cupin domain LCH17_04855 PF00171 Aldehyde dehydrogenase family LCH17_04860 PF00202 Aminotransferase class-III LCH17_04865 PF00324 Amino acid permease LCH17_04875 PF13520 Amino acid permease LCH17_04885 PF02690 Na+/Pi-cotransporter LCH17_04890 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LCH17_04890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCH17_04895 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LCH17_04900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_04900 PF00072 Response regulator receiver domain LCH17_04900 PF00989 PAS fold LCH17_04900 PF00512 His Kinase A (phospho-acceptor) domain LCH17_04900 PF01627 Hpt domain LCH17_04900 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH17_04915 PF01048 Phosphorylase superfamily LCH17_04950 PF13474 SnoaL-like domain LCH17_04955 PF00291 Pyridoxal-phosphate dependent enzyme LCH17_04955 PF14821 Threonine synthase N terminus LCH17_04960 PF08544 GHMP kinases C terminal LCH17_04960 PF00288 GHMP kinases N terminal domain LCH17_04965 PF00696 Amino acid kinase family LCH17_04965 PF01842 ACT domain LCH17_04965 PF13840 ACT domain LCH17_04965 PF00742 Homoserine dehydrogenase LCH17_04965 PF03447 Homoserine dehydrogenase, NAD binding domain LCH17_04970 PF00588 SpoU rRNA Methylase family LCH17_04975 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LCH17_04990 PF03737 Aldolase/RraA LCH17_05000 PF00486 Transcriptional regulatory protein, C terminal LCH17_05000 PF00072 Response regulator receiver domain LCH17_05015 PF00664 ABC transporter transmembrane region LCH17_05015 PF00005 ABC transporter LCH17_05020 PF00664 ABC transporter transmembrane region LCH17_05020 PF00005 ABC transporter LCH17_05040 PF18389 TrmO C-terminal domain LCH17_05040 PF01980 tRNA-methyltransferase O LCH17_05045 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LCH17_05045 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LCH17_05055 PF02861 Clp amino terminal domain, pathogenicity island component LCH17_05055 PF10431 C-terminal, D2-small domain, of ClpB protein LCH17_05055 PF17871 AAA lid domain LCH17_05055 PF07724 AAA domain (Cdc48 subfamily) LCH17_05055 PF00004 ATPase family associated with various cellular activities (AAA) LCH17_05060 PF00291 Pyridoxal-phosphate dependent enzyme LCH17_05065 PF00381 PTS HPr component phosphorylation site LCH17_05070 PF02896 PEP-utilising enzyme, TIM barrel domain LCH17_05070 PF00391 PEP-utilising enzyme, mobile domain LCH17_05070 PF05524 PEP-utilising enzyme, N-terminal LCH17_05075 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LCH17_05080 PF00990 Diguanylate cyclase, GGDEF domain LCH17_05080 PF00072 Response regulator receiver domain LCH17_05090 PF01292 Prokaryotic cytochrome b561 LCH17_05100 PF00149 Calcineurin-like phosphoesterase LCH17_05100 PF12320 Type 5 capsule protein repressor C-terminal domain LCH17_05110 PF04381 Putative exonuclease, RdgC LCH17_05120 PF02254 TrkA-N domain LCH17_05120 PF00999 Sodium/hydrogen exchanger family LCH17_05125 PF04151 Bacterial pre-peptidase C-terminal domain LCH17_05125 PF04389 Peptidase family M28 LCH17_05135 PF00224 Pyruvate kinase, barrel domain LCH17_05135 PF02887 Pyruvate kinase, alpha/beta domain LCH17_05140 PF00924 Mechanosensitive ion channel LCH17_05140 PF12795 Mechanosensitive ion channel porin domain LCH17_05140 PF12794 Mechanosensitive ion channel inner membrane domain 1 LCH17_05150 PF10282 Lactonase, 7-bladed beta-propeller LCH17_05155 PF00860 Permease family LCH17_05160 PF00390 Malic enzyme, N-terminal domain LCH17_05160 PF03949 Malic enzyme, NAD binding domain LCH17_05165 PF00072 Response regulator receiver domain LCH17_05175 PF13247 4Fe-4S dicluster domain LCH17_05180 PF12838 4Fe-4S dicluster domain LCH17_05180 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LCH17_05180 PF01568 Molydopterin dinucleotide binding domain LCH17_05180 PF00384 Molybdopterin oxidoreductase LCH17_05180 PF00384 Molybdopterin oxidoreductase LCH17_05180 PF12838 4Fe-4S dicluster domain LCH17_05180 PF01568 Molydopterin dinucleotide binding domain LCH17_05180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LCH17_05180 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LCH17_05180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LCH17_05215 PF02634 FdhD/NarQ family LCH17_05220 PF12728 Helix-turn-helix domain LCH17_05220 PF12727 PBP superfamily domain LCH17_05225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_05225 PF00512 His Kinase A (phospho-acceptor) domain LCH17_05225 PF00989 PAS fold LCH17_05230 PF02954 Bacterial regulatory protein, Fis family LCH17_05230 PF00072 Response regulator receiver domain LCH17_05230 PF00158 Sigma-54 interaction domain LCH17_05235 PF12849 PBP superfamily domain LCH17_05240 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_05245 PF00005 ABC transporter LCH17_05250 PF12804 MobA-like NTP transferase domain LCH17_05255 PF00994 Probable molybdopterin binding domain LCH17_05255 PF03454 MoeA C-terminal region (domain IV) LCH17_05255 PF03453 MoeA N-terminal region (domain I and II) LCH17_05260 PF04632 Fusaric acid resistance protein family LCH17_05295 PF05114 Protein of unknown function (DUF692) LCH17_05305 PF10725 Protein of unknown function (DUF2517) LCH17_05325 PF09308 LuxQ, periplasmic LCH17_05325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_05325 PF00512 His Kinase A (phospho-acceptor) domain LCH17_05325 PF00072 Response regulator receiver domain LCH17_05330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCH17_05335 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_05340 PF12911 N-terminal TM domain of oligopeptide transport permease C LCH17_05340 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_05345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCH17_05345 PF00005 ABC transporter LCH17_05350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCH17_05350 PF00005 ABC transporter LCH17_05360 PF01869 BadF/BadG/BcrA/BcrD ATPase family LCH17_05365 PF00728 Glycosyl hydrolase family 20, catalytic domain LCH17_05365 PF02838 Glycosyl hydrolase family 20, domain 2 LCH17_05370 PF08447 PAS fold LCH17_05370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_05385 PF01131 DNA topoisomerase LCH17_05385 PF01751 Toprim domain LCH17_05385 PF01396 Topoisomerase DNA binding C4 zinc finger LCH17_05385 PF08272 Topoisomerase I zinc-ribbon-like LCH17_05390 PF04996 Succinylarginine dihydrolase LCH17_05395 PF08496 Peptidase family S49 N-terminal LCH17_05395 PF01343 Peptidase family S49 LCH17_05400 PF00106 short chain dehydrogenase LCH17_05405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_05405 PF03466 LysR substrate binding domain LCH17_05410 PF07690 Major Facilitator Superfamily LCH17_05415 PF00155 Aminotransferase class I and II LCH17_05425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_05425 PF03466 LysR substrate binding domain LCH17_05430 PF00709 Adenylosuccinate synthetase LCH17_05435 PF01161 Phosphatidylethanolamine-binding protein LCH17_05445 PF01204 Trehalase LCH17_05450 PF00579 tRNA synthetases class I (W and Y) LCH17_05455 PF01476 LysM domain LCH17_05455 PF08525 Opacity-associated protein A N-terminal motif LCH17_05455 PF01551 Peptidase family M23 LCH17_05460 PF03702 Anhydro-N-acetylmuramic acid kinase LCH17_05465 PF01965 DJ-1/PfpI family LCH17_05470 PF01042 Endoribonuclease L-PSP LCH17_05480 PF00456 Transketolase, thiamine diphosphate binding domain LCH17_05480 PF02780 Transketolase, C-terminal domain LCH17_05480 PF02779 Transketolase, pyrimidine binding domain LCH17_05485 PF02773 S-adenosylmethionine synthetase, C-terminal domain LCH17_05485 PF02772 S-adenosylmethionine synthetase, central domain LCH17_05485 PF00438 S-adenosylmethionine synthetase, N-terminal domain LCH17_05490 PF17283 SprT-like zinc ribbon domain LCH17_05490 PF10263 SprT-like family LCH17_05495 PF04231 Endonuclease I LCH17_05500 PF04452 RNA methyltransferase LCH17_05505 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LCH17_05505 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LCH17_05510 PF12729 Four helix bundle sensory module for signal transduction LCH17_05510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_05510 PF00672 HAMP domain LCH17_05515 PF02622 Uncharacterized ACR, COG1678 LCH17_05520 PF03652 Holliday junction resolvase LCH17_05525 PF00854 POT family LCH17_05535 PF03466 LysR substrate binding domain LCH17_05535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_05550 PF00144 Beta-lactamase LCH17_05555 PF07726 ATPase family associated with various cellular activities (AAA) LCH17_05555 PF17863 AAA lid domain LCH17_05565 PF01841 Transglutaminase-like superfamily LCH17_05565 PF13559 Domain of unknown function (DUF4129) LCH17_05565 PF11992 Domain of unknown function (DUF3488) LCH17_05570 PF01235 Sodium:alanine symporter family LCH17_05575 PF00923 Transaldolase/Fructose-6-phosphate aldolase LCH17_05590 PF03167 Uracil DNA glycosylase superfamily LCH17_05595 PF01228 Glycine radical LCH17_05600 PF00375 Sodium:dicarboxylate symporter family LCH17_05605 PF00793 DAHP synthetase I family LCH17_05610 PF13369 Transglutaminase-like superfamily LCH17_05620 PF13847 Methyltransferase domain LCH17_05620 PF17827 PrmC N-terminal domain LCH17_05625 PF03462 PCRF domain LCH17_05625 PF00472 RF-1 domain LCH17_05630 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LCH17_05630 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LCH17_05630 PF01488 Shikimate / quinate 5-dehydrogenase LCH17_05635 PF03550 Outer membrane lipoprotein LolB LCH17_05640 PF08544 GHMP kinases C terminal LCH17_05640 PF00288 GHMP kinases N terminal domain LCH17_05650 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LCH17_05650 PF14572 Phosphoribosyl synthetase-associated domain LCH17_05655 PF02872 5'-nucleotidase, C-terminal domain LCH17_05655 PF00149 Calcineurin-like phosphoesterase LCH17_05660 PF01195 Peptidyl-tRNA hydrolase LCH17_05665 PF01926 50S ribosome-binding GTPase LCH17_05665 PF06071 Protein of unknown function (DUF933) LCH17_05710 PF02080 TrkA-C domain LCH17_05710 PF03600 Citrate transporter LCH17_05715 PF04973 Nicotinamide mononucleotide transporter LCH17_05720 PF01048 Phosphorylase superfamily LCH17_05730 PF04266 ASCH domain LCH17_05740 PF00128 Alpha amylase, catalytic domain LCH17_05740 PF16657 Maltogenic Amylase, C-terminal domain LCH17_05755 PF00005 ABC transporter LCH17_05755 PF12848 ABC transporter LCH17_05760 PF07690 Major Facilitator Superfamily LCH17_05765 PF10371 Domain of unknown function LCH17_05765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LCH17_05765 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LCH17_05765 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LCH17_05765 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LCH17_05770 PF07690 Major Facilitator Superfamily LCH17_05775 PF13419 Haloacid dehalogenase-like hydrolase LCH17_05785 PF00171 Aldehyde dehydrogenase family LCH17_05790 PF04958 Arginine N-succinyltransferase beta subunit LCH17_05795 PF00202 Aminotransferase class-III LCH17_05800 PF00117 Glutamine amidotransferase class-I LCH17_05810 PF00579 tRNA synthetases class I (W and Y) LCH17_05815 PF13419 Haloacid dehalogenase-like hydrolase LCH17_05820 PF00834 Ribulose-phosphate 3 epimerase family LCH17_05825 PF02086 D12 class N6 adenine-specific DNA methyltransferase LCH17_05835 PF01761 3-dehydroquinate synthase LCH17_05840 PF01202 Shikimate kinase LCH17_05845 PF03958 Bacterial type II/III secretion system short domain LCH17_05845 PF11741 AMIN domain LCH17_05845 PF00263 Bacterial type II and III secretion system protein LCH17_05845 PF07660 Secretin and TonB N terminus short domain LCH17_05855 PF04350 Pilus assembly protein, PilO LCH17_05865 PF11104 Type IV pilus assembly protein PilM; LCH17_05870 PF00905 Penicillin binding protein transpeptidase domain LCH17_05870 PF00912 Transglycosylase LCH17_05870 PF17092 Penicillin-binding protein OB-like domain LCH17_05875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_05875 PF03466 LysR substrate binding domain LCH17_05880 PF00672 HAMP domain LCH17_05880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_05880 PF02743 Cache domain LCH17_05895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_05895 PF03466 LysR substrate binding domain LCH17_05910 PF01476 LysM domain LCH17_05910 PF08525 Opacity-associated protein A N-terminal motif LCH17_05910 PF01551 Peptidase family M23 LCH17_05920 PF00924 Mechanosensitive ion channel LCH17_05920 PF12795 Mechanosensitive ion channel porin domain LCH17_05920 PF12794 Mechanosensitive ion channel inner membrane domain 1 LCH17_05925 PF03009 Glycerophosphoryl diester phosphodiesterase family LCH17_05930 PF02743 Cache domain LCH17_05930 PF00672 HAMP domain LCH17_05930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_05935 PF00890 FAD binding domain LCH17_05935 PF02910 Fumarate reductase flavoprotein C-term LCH17_05940 PF13085 2Fe-2S iron-sulfur cluster binding domain LCH17_05940 PF13183 4Fe-4S dicluster domain LCH17_05945 PF02300 Fumarate reductase subunit C LCH17_05950 PF02313 Fumarate reductase subunit D LCH17_05970 PF06224 Winged helix DNA-binding domain LCH17_05985 PF00501 AMP-binding enzyme LCH17_06005 PF00072 Response regulator receiver domain LCH17_06005 PF00486 Transcriptional regulatory protein, C terminal LCH17_06010 PF08521 Two-component sensor kinase N-terminal LCH17_06010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_06010 PF00512 His Kinase A (phospho-acceptor) domain LCH17_06020 PF00478 IMP dehydrogenase / GMP reductase domain LCH17_06030 PF08207 Elongation factor P (EF-P) KOW-like domain LCH17_06030 PF09285 Elongation factor P, C-terminal LCH17_06030 PF01132 Elongation factor P (EF-P) OB domain LCH17_06035 PF09997 Predicted membrane protein (DUF2238) LCH17_06045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LCH17_06045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCH17_06055 PF00990 Diguanylate cyclase, GGDEF domain LCH17_06065 PF13419 Haloacid dehalogenase-like hydrolase LCH17_06075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_06075 PF03466 LysR substrate binding domain LCH17_06080 PF05230 MASE2 domain LCH17_06080 PF00990 Diguanylate cyclase, GGDEF domain LCH17_06085 PF00313 'Cold-shock' DNA-binding domain LCH17_06090 PF00857 Isochorismatase family LCH17_06095 PF01494 FAD binding domain LCH17_06100 PF04055 Radical SAM superfamily LCH17_06100 PF01938 TRAM domain LCH17_06100 PF00919 Uncharacterized protein family UPF0004 LCH17_06105 PF02562 PhoH-like protein LCH17_06110 PF02130 Uncharacterized protein family UPF0054 LCH17_06115 PF00571 CBS domain LCH17_06115 PF03471 Transporter associated domain LCH17_06120 PF00795 Carbon-nitrogen hydrolase LCH17_06125 PF07295 Zinc-ribbon containing domain LCH17_06130 PF08264 Anticodon-binding domain of tRNA LCH17_06130 PF00133 tRNA synthetases class I (I, L, M and V) LCH17_06130 PF13603 Leucyl-tRNA synthetase, Domain 2 LCH17_06145 PF01467 Cytidylyltransferase-like LCH17_06155 PF02590 Predicted SPOUT methyltransferase LCH17_06160 PF03717 Penicillin-binding Protein dimerisation domain LCH17_06160 PF00905 Penicillin binding protein transpeptidase domain LCH17_06165 PF01098 Cell cycle protein LCH17_06170 PF13406 Transglycosylase SLT domain LCH17_06175 PF03330 Lytic transglycolase LCH17_06175 PF05036 Sporulation related domain LCH17_06180 PF00768 D-alanyl-D-alanine carboxypeptidase LCH17_06180 PF07943 Penicillin-binding protein 5, C-terminal domain LCH17_06185 PF04359 Protein of unknown function (DUF493) LCH17_06190 PF03099 Biotin/lipoate A/B protein ligase family LCH17_06195 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LCH17_06195 PF04055 Radical SAM superfamily LCH17_06205 PF06821 Serine hydrolase LCH17_06210 PF02508 Rnf-Nqr subunit, membrane protein LCH17_06225 PF13411 MerR HTH family regulatory protein LCH17_06230 PF01368 DHH family LCH17_06230 PF02272 DHHA1 domain LCH17_06230 PF17768 RecJ OB domain LCH17_06235 PF13098 Thioredoxin-like domain LCH17_06235 PF10411 Disulfide bond isomerase protein N-terminus LCH17_06240 PF01741 Large-conductance mechanosensitive channel, MscL LCH17_06245 PF02899 Phage integrase, N-terminal SAM-like domain LCH17_06245 PF00589 Phage integrase family LCH17_06250 PF00258 Flavodoxin LCH17_06255 PF01523 Putative modulator of DNA gyrase LCH17_06260 PF01523 Putative modulator of DNA gyrase LCH17_06270 PF03734 L,D-transpeptidase catalytic domain LCH17_06270 PF17969 L,D-transpeptidase C-terminal domain LCH17_06275 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LCH17_06280 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LCH17_06300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LCH17_06300 PF00384 Molybdopterin oxidoreductase LCH17_06300 PF01568 Molydopterin dinucleotide binding domain LCH17_06305 PF03916 Polysulphide reductase, NrfD LCH17_06310 PF13247 4Fe-4S dicluster domain LCH17_06315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_06315 PF00989 PAS fold LCH17_06315 PF00512 His Kinase A (phospho-acceptor) domain LCH17_06320 PF00196 Bacterial regulatory proteins, luxR family LCH17_06320 PF00072 Response regulator receiver domain LCH17_06325 PF06580 Histidine kinase LCH17_06325 PF07694 5TMR of 5TMR-LYT LCH17_06330 PF00072 Response regulator receiver domain LCH17_06330 PF04397 LytTr DNA-binding domain LCH17_06335 PF13722 5TM C-terminal transporter carbon starvation CstA LCH17_06335 PF02554 Carbon starvation protein CstA LCH17_06340 PF03575 Peptidase family S51 LCH17_06345 PF10415 Fumarase C C-terminus LCH17_06345 PF00206 Lyase LCH17_06355 PF02635 DsrE/DsrF-like family LCH17_06360 PF03707 Bacterial signalling protein N terminal repeat LCH17_06360 PF00990 Diguanylate cyclase, GGDEF domain LCH17_06360 PF00563 EAL domain LCH17_06365 PF07690 Major Facilitator Superfamily LCH17_06370 PF00575 S1 RNA binding domain LCH17_06370 PF03725 3' exoribonuclease family, domain 2 LCH17_06370 PF00013 KH domain LCH17_06370 PF01138 3' exoribonuclease family, domain 1 LCH17_06370 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LCH17_06375 PF00312 Ribosomal protein S15 LCH17_06380 PF16198 tRNA pseudouridylate synthase B C-terminal domain LCH17_06380 PF09157 Pseudouridine synthase II TruB, C-terminal LCH17_06380 PF01509 TruB family pseudouridylate synthase (N terminal domain) LCH17_06385 PF02033 Ribosome-binding factor A LCH17_06390 PF00009 Elongation factor Tu GTP binding domain LCH17_06390 PF11987 Translation-initiation factor 2 LCH17_06390 PF08364 Bacterial translation initiation factor IF-2 associated region LCH17_06390 PF04760 Translation initiation factor IF-2, N-terminal region LCH17_06395 PF13184 NusA-like KH domain LCH17_06395 PF08529 NusA N-terminal domain LCH17_06395 PF00575 S1 RNA binding domain LCH17_06400 PF02576 RimP N-terminal domain LCH17_06400 PF17384 RimP C-terminal SH3 domain LCH17_06415 PF03840 Preprotein translocase SecG subunit LCH17_06420 PF00121 Triosephosphate isomerase LCH17_06425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LCH17_06425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LCH17_06425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LCH17_06425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LCH17_06430 PF00809 Pterin binding enzyme LCH17_06435 PF00004 ATPase family associated with various cellular activities (AAA) LCH17_06435 PF17862 AAA+ lid domain LCH17_06435 PF06480 FtsH Extracellular LCH17_06435 PF01434 Peptidase family M41 LCH17_06440 PF01728 FtsJ-like methyltransferase LCH17_06445 PF01985 CRS1 / YhbY (CRM) domain LCH17_06455 PF03449 Transcription elongation factor, N-terminal LCH17_06455 PF01272 Transcription elongation factor, GreA/GreB, C-term LCH17_06460 PF13677 Membrane MotB of proton-channel complex MotA/MotB LCH17_06460 PF00691 OmpA family LCH17_06465 PF01618 MotA/TolQ/ExbB proton channel family LCH17_06470 PF02609 Exonuclease VII small subunit LCH17_06475 PF00348 Polyprenyl synthetase LCH17_06480 PF02779 Transketolase, pyrimidine binding domain LCH17_06480 PF02780 Transketolase, C-terminal domain LCH17_06480 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LCH17_06485 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_06485 PF12911 N-terminal TM domain of oligopeptide transport permease C LCH17_06490 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_06495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCH17_06500 PF00005 ABC transporter LCH17_06500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCH17_06505 PF04608 Phosphatidylglycerophosphatase A LCH17_06510 PF00586 AIR synthase related protein, N-terminal domain LCH17_06510 PF02769 AIR synthase related protein, C-terminal domain LCH17_06515 PF01029 NusB family LCH17_06520 PF00885 6,7-dimethyl-8-ribityllumazine synthase LCH17_06530 PF00925 GTP cyclohydrolase II LCH17_06530 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LCH17_06535 PF00677 Lumazine binding domain LCH17_06540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LCH17_06540 PF01872 RibD C-terminal domain LCH17_06545 PF03477 ATP cone domain LCH17_06555 PF00464 Serine hydroxymethyltransferase LCH17_06570 PF02613 Nitrate reductase delta subunit LCH17_06590 PF00563 EAL domain LCH17_06590 PF00990 Diguanylate cyclase, GGDEF domain LCH17_06590 PF03707 Bacterial signalling protein N terminal repeat LCH17_06590 PF13188 PAS domain LCH17_06600 PF16177 Acetyl-coenzyme A synthetase N-terminus LCH17_06600 PF00501 AMP-binding enzyme LCH17_06600 PF13193 AMP-binding enzyme C-terminal domain LCH17_06605 PF01220 Dehydroquinase class II LCH17_06610 PF00364 Biotin-requiring enzyme LCH17_06615 PF02785 Biotin carboxylase C-terminal domain LCH17_06615 PF00289 Biotin carboxylase, N-terminal domain LCH17_06615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LCH17_06625 PF00474 Sodium:solute symporter family LCH17_06630 PF02378 Phosphotransferase system, EIIC LCH17_06630 PF00367 phosphotransferase system, EIIB LCH17_06630 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LCH17_06635 PF03466 LysR substrate binding domain LCH17_06635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_06640 PF08240 Alcohol dehydrogenase GroES-like domain LCH17_06640 PF00107 Zinc-binding dehydrogenase LCH17_06650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LCH17_06650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCH17_06650 PF01842 ACT domain LCH17_06655 PF14602 Hexapeptide repeat of succinyl-transferase LCH17_06655 PF12464 Maltose acetyltransferase LCH17_06670 PF00881 Nitroreductase family LCH17_06675 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LCH17_06675 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH17_06680 PF01343 Peptidase family S49 LCH17_06695 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LCH17_06695 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LCH17_06700 PF07023 Protein of unknown function (DUF1315) LCH17_06705 PF17763 Glutaminase/Asparaginase C-terminal domain LCH17_06705 PF00710 Asparaginase, N-terminal LCH17_06710 PF03616 Sodium/glutamate symporter LCH17_06715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_06715 PF00672 HAMP domain LCH17_06715 PF02743 Cache domain LCH17_06725 PF00152 tRNA synthetases class II (D, K and N) LCH17_06725 PF01336 OB-fold nucleic acid binding domain LCH17_06730 PF02567 Phenazine biosynthesis-like protein LCH17_06735 PF00667 FAD binding domain LCH17_06735 PF00258 Flavodoxin LCH17_06735 PF00175 Oxidoreductase NAD-binding domain LCH17_06740 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LCH17_06740 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LCH17_06745 PF01507 Phosphoadenosine phosphosulfate reductase family LCH17_06750 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LCH17_06755 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_06760 PF00571 CBS domain LCH17_06760 PF00005 ABC transporter LCH17_06765 PF00186 Dihydrofolate reductase LCH17_06770 PF12821 Threonine/Serine exporter, ThrE LCH17_06775 PF06738 Putative threonine/serine exporter LCH17_06785 PF00994 Probable molybdopterin binding domain LCH17_06795 PF00109 Beta-ketoacyl synthase, N-terminal domain LCH17_06795 PF02801 Beta-ketoacyl synthase, C-terminal domain LCH17_06810 PF02801 Beta-ketoacyl synthase, C-terminal domain LCH17_06810 PF00109 Beta-ketoacyl synthase, N-terminal domain LCH17_06835 PF00221 Aromatic amino acid lyase LCH17_06845 PF07977 FabA-like domain LCH17_06850 PF13193 AMP-binding enzyme C-terminal domain LCH17_06850 PF00501 AMP-binding enzyme LCH17_06860 PF00550 Phosphopantetheine attachment site LCH17_06865 PF00550 Phosphopantetheine attachment site LCH17_06900 PF03150 Di-haem cytochrome c peroxidase LCH17_06900 PF00034 Cytochrome c LCH17_06905 PF00194 Eukaryotic-type carbonic anhydrase LCH17_06910 PF04227 Indigoidine synthase A like protein LCH17_06915 PF00294 pfkB family carbohydrate kinase LCH17_06940 PF00582 Universal stress protein family LCH17_06950 PF00171 Aldehyde dehydrogenase family LCH17_06955 PF00696 Amino acid kinase family LCH17_06955 PF01472 PUA domain LCH17_06960 PF07417 Sigma factor-binding transcriptional regulator Crl LCH17_06965 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) LCH17_06970 PF00156 Phosphoribosyl transferase domain LCH17_06975 PF07687 Peptidase dimerisation domain LCH17_06975 PF01546 Peptidase family M20/M25/M40 LCH17_06980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCH17_06980 PF00005 ABC transporter LCH17_06985 PF00005 ABC transporter LCH17_06985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCH17_06995 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_06995 PF12911 N-terminal TM domain of oligopeptide transport permease C LCH17_07000 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_07005 PF07715 TonB-dependent Receptor Plug Domain LCH17_07005 PF00593 TonB dependent receptor LCH17_07015 PF01618 MotA/TolQ/ExbB proton channel family LCH17_07020 PF01618 MotA/TolQ/ExbB proton channel family LCH17_07025 PF02472 Biopolymer transport protein ExbD/TolR LCH17_07040 PF00704 Glycosyl hydrolases family 18 LCH17_07040 PF06483 Chitinase C LCH17_07075 PF00749 tRNA synthetases class I (E and Q), catalytic domain LCH17_07080 PF00672 HAMP domain LCH17_07080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_07090 PF00313 'Cold-shock' DNA-binding domain LCH17_07130 PF00929 Exonuclease LCH17_07135 PF03193 RsgA GTPase LCH17_07140 PF02666 Phosphatidylserine decarboxylase LCH17_07145 PF09905 DNA-binding protein VF530 LCH17_07160 PF04224 Protein of unknown function, DUF417 LCH17_07165 PF02627 Carboxymuconolactone decarboxylase family LCH17_07170 PF12833 Helix-turn-helix domain LCH17_07170 PF12852 Cupin LCH17_07180 PF00990 Diguanylate cyclase, GGDEF domain LCH17_07180 PF03707 Bacterial signalling protein N terminal repeat LCH17_07180 PF00563 EAL domain LCH17_07185 PF06877 Regulator of ribonuclease activity B LCH17_07190 PF05547 Immune inhibitor A peptidase M6 LCH17_07190 PF00801 PKD domain LCH17_07205 PF00561 alpha/beta hydrolase fold LCH17_07210 PF00664 ABC transporter transmembrane region LCH17_07210 PF00005 ABC transporter LCH17_07215 PF06004 Bacterial protein of unknown function (DUF903) LCH17_07220 PF00581 Rhodanese-like domain LCH17_07225 PF04960 Glutaminase LCH17_07230 PF04320 Protein with unknown function (DUF469) LCH17_07235 PF02390 Putative methyltransferase LCH17_07240 PF04389 Peptidase family M28 LCH17_07240 PF01483 Proprotein convertase P-domain LCH17_07245 PF00155 Aminotransferase class I and II LCH17_07250 PF12792 CSS motif domain associated with EAL LCH17_07250 PF00563 EAL domain LCH17_07255 PF08338 Domain of unknown function (DUF1731) LCH17_07255 PF01370 NAD dependent epimerase/dehydratase family LCH17_07265 PF00005 ABC transporter LCH17_07270 PF13472 GDSL-like Lipase/Acylhydrolase family LCH17_07275 PF01584 CheW-like domain LCH17_07275 PF00072 Response regulator receiver domain LCH17_07285 PF06826 Predicted Permease Membrane Region LCH17_07285 PF02080 TrkA-C domain LCH17_07290 PF03006 Haemolysin-III related LCH17_07295 PF00282 Pyridoxal-dependent decarboxylase conserved domain LCH17_07300 PF04279 Intracellular septation protein A LCH17_07305 PF03795 YCII-related domain LCH17_07310 PF00459 Inositol monophosphatase family LCH17_07320 PF00483 Nucleotidyl transferase LCH17_07325 PF00854 POT family LCH17_07330 PF00072 Response regulator receiver domain LCH17_07360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCH17_07365 PF02321 Outer membrane efflux protein LCH17_07370 PF01207 Dihydrouridine synthase (Dus) LCH17_07375 PF02954 Bacterial regulatory protein, Fis family LCH17_07380 PF01810 LysE type translocator LCH17_07405 PF01521 Iron-sulphur cluster biosynthesis LCH17_07415 PF00654 Voltage gated chloride channel LCH17_07420 PF00202 Aminotransferase class-III LCH17_07435 PF01569 PAP2 superfamily LCH17_07445 PF11849 Domain of unknown function (DUF3369) LCH17_07455 PF00893 Small Multidrug Resistance protein LCH17_07460 PF00893 Small Multidrug Resistance protein LCH17_07465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCH17_07470 PF00912 Transglycosylase LCH17_07470 PF00905 Penicillin binding protein transpeptidase domain LCH17_07470 PF14814 Bifunctional transglycosylase second domain LCH17_07475 PF00271 Helicase conserved C-terminal domain LCH17_07475 PF08482 ATP-dependent helicase C-terminal LCH17_07475 PF00270 DEAD/DEAH box helicase LCH17_07475 PF04408 Helicase associated domain (HA2) LCH17_07485 PF03749 Sugar fermentation stimulation protein RE domain LCH17_07485 PF17746 SfsA N-terminal OB domain LCH17_07490 PF01258 Prokaryotic dksA/traR C4-type zinc finger LCH17_07495 PF00749 tRNA synthetases class I (E and Q), catalytic domain LCH17_07500 PF01743 Poly A polymerase head domain LCH17_07500 PF12626 Polymerase A arginine-rich C-terminus LCH17_07500 PF12627 Probable RNA and SrmB- binding site of polymerase A LCH17_07505 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LCH17_07510 PF02548 Ketopantoate hydroxymethyltransferase LCH17_07515 PF02569 Pantoate-beta-alanine ligase LCH17_07535 PF01869 BadF/BadG/BcrA/BcrD ATPase family LCH17_07540 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component LCH17_07545 PF01061 ABC-2 type transporter LCH17_07550 PF00005 ABC transporter LCH17_07555 PF00156 Phosphoribosyl transferase domain LCH17_07560 PF00440 Bacterial regulatory proteins, tetR family LCH17_07565 PF02441 Flavoprotein LCH17_07570 PF01225 Mur ligase family, catalytic domain LCH17_07570 PF02875 Mur ligase family, glutamate ligase domain LCH17_07570 PF08245 Mur ligase middle domain LCH17_07575 PF00719 Inorganic pyrophosphatase LCH17_07590 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) LCH17_07605 PF00005 ABC transporter LCH17_07655 PF03600 Citrate transporter LCH17_07655 PF02080 TrkA-C domain LCH17_07660 PF00009 Elongation factor Tu GTP binding domain LCH17_07665 PF01507 Phosphoadenosine phosphosulfate reductase family LCH17_07670 PF10414 Sirohaem synthase dimerisation region LCH17_07670 PF14824 Sirohaem biosynthesis protein central LCH17_07670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCH17_07675 PF01145 SPFH domain / Band 7 family LCH17_07675 PF16200 C-terminal region of band_7 LCH17_07680 PF01957 NfeD-like C-terminal, partner-binding LCH17_07685 PF00571 CBS domain LCH17_07685 PF01380 SIS domain LCH17_07690 PF00005 ABC transporter LCH17_07690 PF12848 ABC transporter LCH17_07700 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LCH17_07705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_07705 PF03466 LysR substrate binding domain LCH17_07710 PF02525 Flavodoxin-like fold LCH17_07740 PF13411 MerR HTH family regulatory protein LCH17_07750 PF00474 Sodium:solute symporter family LCH17_07755 PF03734 L,D-transpeptidase catalytic domain LCH17_07755 PF17969 L,D-transpeptidase C-terminal domain LCH17_07760 PF00924 Mechanosensitive ion channel LCH17_07765 PF00871 Acetokinase family LCH17_07770 PF04074 YhcH/YjgK/YiaL LCH17_07780 PF07732 Multicopper oxidase LCH17_07780 PF00394 Multicopper oxidase LCH17_07780 PF07731 Multicopper oxidase LCH17_07785 PF01177 Asp/Glu/Hydantoin racemase LCH17_07790 PF01810 LysE type translocator LCH17_07800 PF00155 Aminotransferase class I and II LCH17_07800 PF00392 Bacterial regulatory proteins, gntR family LCH17_07825 PF00209 Sodium:neurotransmitter symporter family LCH17_07835 PF00209 Sodium:neurotransmitter symporter family LCH17_07855 PF07690 Major Facilitator Superfamily LCH17_07870 PF01037 Lrp/AsnC ligand binding domain LCH17_07885 PF01047 MarR family LCH17_07890 PF02566 OsmC-like protein LCH17_07895 PF00107 Zinc-binding dehydrogenase LCH17_07895 PF16884 N-terminal domain of oxidoreductase LCH17_07900 PF00293 NUDIX domain LCH17_07910 PF01641 SelR domain LCH17_07915 PF00128 Alpha amylase, catalytic domain LCH17_07915 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LCH17_07920 PF02806 Alpha amylase, C-terminal all-beta domain LCH17_07920 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LCH17_07920 PF00128 Alpha amylase, catalytic domain LCH17_07925 PF02446 4-alpha-glucanotransferase LCH17_07930 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LCH17_07930 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LCH17_07935 PF01263 Aldose 1-epimerase LCH17_07940 PF02445 Quinolinate synthetase A protein LCH17_07945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_07945 PF00672 HAMP domain LCH17_08020 PF16331 TolA binding protein trimerisation LCH17_08020 PF13174 Tetratricopeptide repeat LCH17_08025 PF00691 OmpA family LCH17_08030 PF07676 WD40-like Beta Propeller Repeat LCH17_08030 PF04052 TolB amino-terminal domain LCH17_08040 PF02472 Biopolymer transport protein ExbD/TolR LCH17_08045 PF01618 MotA/TolQ/ExbB proton channel family LCH17_08050 PF03061 Thioesterase superfamily LCH17_08055 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) LCH17_08060 PF08173 Membrane bound YbgT-like protein LCH17_08065 PF02322 Cytochrome bd terminal oxidase subunit II LCH17_08070 PF01654 Cytochrome bd terminal oxidase subunit I LCH17_08075 PF05496 Holliday junction DNA helicase RuvB P-loop domain LCH17_08075 PF05491 RuvB C-terminal winged helix domain LCH17_08075 PF17864 RuvB AAA lid domain LCH17_08080 PF01330 RuvA N terminal domain LCH17_08080 PF07499 RuvA, C-terminal domain LCH17_08085 PF00672 HAMP domain LCH17_08085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_08090 PF03129 Anticodon binding domain LCH17_08090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LCH17_08090 PF04073 Aminoacyl-tRNA editing domain LCH17_08095 PF00106 short chain dehydrogenase LCH17_08110 PF00378 Enoyl-CoA hydratase/isomerase LCH17_08115 PF10952 Protein of unknown function (DUF2753) LCH17_08120 PF00132 Bacterial transferase hexapeptide (six repeats) LCH17_08130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCH17_08145 PF02594 Uncharacterised ACR, YggU family COG1872 LCH17_08150 PF02325 YGGT family LCH17_08155 PF14748 Pyrroline-5-carboxylate reductase dimerisation LCH17_08155 PF03807 NADP oxidoreductase coenzyme F420-dependent LCH17_08160 PF01168 Alanine racemase, N-terminal domain LCH17_08165 PF00437 Type II/IV secretion system protein LCH17_08170 PF00437 Type II/IV secretion system protein LCH17_08175 PF03883 Peroxide stress protein YaaA LCH17_08180 PF00271 Helicase conserved C-terminal domain LCH17_08180 PF00270 DEAD/DEAH box helicase LCH17_08185 PF05175 Methyltransferase small domain LCH17_08190 PF05525 Branched-chain amino acid transport protein LCH17_08195 PF05525 Branched-chain amino acid transport protein LCH17_08210 PF01475 Ferric uptake regulator family LCH17_08215 PF01207 Dihydrouridine synthase (Dus) LCH17_08230 PF00216 Bacterial DNA-binding protein LCH17_08240 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LCH17_08245 PF07238 PilZ domain LCH17_08250 PF18073 Rubredoxin metal binding domain LCH17_08265 PF18429 Domain of unknown function (DUF5609) LCH17_08275 PF05231 MASE1 LCH17_08275 PF00990 Diguanylate cyclase, GGDEF domain LCH17_08275 PF00563 EAL domain LCH17_08275 PF08448 PAS fold LCH17_08275 PF13426 PAS domain LCH17_08275 PF08447 PAS fold LCH17_08280 PF01048 Phosphorylase superfamily LCH17_08285 PF01676 Metalloenzyme superfamily LCH17_08290 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LCH17_08290 PF00591 Glycosyl transferase family, a/b domain LCH17_08290 PF02885 Glycosyl transferase family, helical bundle domain LCH17_08295 PF01791 DeoC/LacD family aldolase LCH17_08305 PF07662 Na+ dependent nucleoside transporter C-terminus LCH17_08305 PF01773 Na+ dependent nucleoside transporter N-terminus LCH17_08305 PF07670 Nucleoside recognition LCH17_08310 PF01026 TatD related DNase LCH17_08315 PF07963 Prokaryotic N-terminal methylation motif LCH17_08325 PF05958 tRNA (Uracil-5-)-methyltransferase LCH17_08325 PF01938 TRAM domain LCH17_08330 PF00909 Ammonium Transporter Family LCH17_08340 PF04851 Type III restriction enzyme, res subunit LCH17_08340 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LCH17_08340 PF00271 Helicase conserved C-terminal domain LCH17_08340 PF08463 EcoEI R protein C-terminal LCH17_08345 PF12161 HsdM N-terminal domain LCH17_08345 PF02384 N-6 DNA Methylase LCH17_08360 PF02796 Helix-turn-helix domain of resolvase LCH17_08360 PF00239 Resolvase, N terminal domain LCH17_08375 PF00665 Integrase core domain LCH17_08380 PF01695 IstB-like ATP binding protein LCH17_08400 PF00589 Phage integrase family LCH17_08415 PF03739 Lipopolysaccharide export system permease LptF/LptG LCH17_08420 PF03739 Lipopolysaccharide export system permease LptF/LptG LCH17_08425 PF02789 Cytosol aminopeptidase family, N-terminal domain LCH17_08425 PF00883 Cytosol aminopeptidase family, catalytic domain LCH17_08430 PF04364 DNA polymerase III chi subunit, HolC LCH17_08435 PF08264 Anticodon-binding domain of tRNA LCH17_08435 PF00133 tRNA synthetases class I (I, L, M and V) LCH17_08435 PF10458 Valyl tRNA synthetase tRNA binding arm LCH17_08440 PF00571 CBS domain LCH17_08440 PF03471 Transporter associated domain LCH17_08440 PF01595 Cyclin M transmembrane N-terminal domain LCH17_08445 PF09335 SNARE associated Golgi protein LCH17_08450 PF00768 D-alanyl-D-alanine carboxypeptidase LCH17_08490 PF02599 Global regulator protein family LCH17_08495 PF00696 Amino acid kinase family LCH17_08495 PF01842 ACT domain LCH17_08495 PF13840 ACT domain LCH17_08500 PF02272 DHHA1 domain LCH17_08500 PF01411 tRNA synthetases class II (A) LCH17_08500 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LCH17_08505 PF02631 RecX family LCH17_08510 PF00154 recA bacterial DNA recombination protein LCH17_08515 PF02464 Competence-damaged protein LCH17_08520 PF05190 MutS family domain IV LCH17_08520 PF01624 MutS domain I LCH17_08520 PF00488 MutS domain V LCH17_08520 PF05192 MutS domain III LCH17_08520 PF05188 MutS domain II LCH17_08525 PF02028 BCCT, betaine/carnitine/choline family transporter LCH17_08540 PF04222 Protein of unknown function (DUF416) LCH17_08545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCH17_08550 PF01551 Peptidase family M23 LCH17_08550 PF08525 Opacity-associated protein A N-terminal motif LCH17_08550 PF01476 LysM domain LCH17_08570 PF01297 Zinc-uptake complex component A periplasmic LCH17_08575 PF00005 ABC transporter LCH17_08580 PF00950 ABC 3 transport family LCH17_08585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_08585 PF03466 LysR substrate binding domain LCH17_08590 PF00892 EamA-like transporter family LCH17_08595 PF03167 Uracil DNA glycosylase superfamily LCH17_08600 PF00892 EamA-like transporter family LCH17_08610 PF01541 GIY-YIG catalytic domain LCH17_08625 PF04012 PspA/IM30 family LCH17_08630 PF01553 Acyltransferase LCH17_08655 PF00578 AhpC/TSA family LCH17_08660 PF00226 DnaJ domain LCH17_08660 PF01556 DnaJ C terminal domain LCH17_08660 PF00684 DnaJ central domain LCH17_08700 PF03989 DNA gyrase C-terminal domain, beta-propeller LCH17_08700 PF00521 DNA gyrase/topoisomerase IV, subunit A LCH17_08705 PF01751 Toprim domain LCH17_08705 PF00986 DNA gyrase B subunit, carboxyl terminus LCH17_08705 PF00204 DNA gyrase B LCH17_08705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_08710 PF04632 Fusaric acid resistance protein family LCH17_08715 PF00529 HlyD membrane-fusion protein of T1SS LCH17_08715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCH17_08720 PF07869 Protein of unknown function (DUF1656) LCH17_08730 PF00293 NUDIX domain LCH17_08735 PF05728 Uncharacterised protein family (UPF0227) LCH17_08740 PF00149 Calcineurin-like phosphoesterase LCH17_08745 PF06853 Protein of unknown function (DUF1249) LCH17_08750 PF00293 NUDIX domain LCH17_08755 PF02321 Outer membrane efflux protein LCH17_08760 PF01467 Cytidylyltransferase-like LCH17_08760 PF00294 pfkB family carbohydrate kinase LCH17_08765 PF03279 Bacterial lipid A biosynthesis acyltransferase LCH17_08780 PF01865 Protein of unknown function DUF47 LCH17_08785 PF01384 Phosphate transporter family LCH17_08790 PF04073 Aminoacyl-tRNA editing domain LCH17_08795 PF07350 Protein of unknown function (DUF1479) LCH17_08815 PF00155 Aminotransferase class I and II LCH17_08815 PF00392 Bacterial regulatory proteins, gntR family LCH17_08820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_08820 PF03466 LysR substrate binding domain LCH17_08825 PF03788 LrgA family LCH17_08830 PF04172 LrgB-like family LCH17_08845 PF12627 Probable RNA and SrmB- binding site of polymerase A LCH17_08845 PF01966 HD domain LCH17_08845 PF01743 Poly A polymerase head domain LCH17_08850 PF01471 Putative peptidoglycan binding domain LCH17_08850 PF13401 AAA domain LCH17_08855 PF16537 Type II secretion system protein B LCH17_08860 PF10576 Iron-sulfur binding domain of endonuclease III LCH17_08860 PF00633 Helix-hairpin-helix motif LCH17_08860 PF00730 HhH-GPD superfamily base excision DNA repair protein LCH17_08860 PF14815 NUDIX domain LCH17_08865 PF04362 Bacterial Fe(2+) trafficking LCH17_08870 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LCH17_08870 PF01464 Transglycosylase SLT domain LCH17_08875 PF04076 Bacterial OB fold (BOF) protein LCH17_08880 PF00657 GDSL-like Lipase/Acylhydrolase LCH17_08890 PF01389 OmpA-like transmembrane domain LCH17_08890 PF00691 OmpA family LCH17_08895 PF03886 ABC-type transport auxiliary lipoprotein component LCH17_08900 PF02470 MlaD protein LCH17_08905 PF04403 Paraquat-inducible protein A LCH17_08910 PF17209 Hfq protein LCH17_08915 PF13419 Haloacid dehalogenase-like hydrolase LCH17_08925 PF00563 EAL domain LCH17_08925 PF01590 GAF domain LCH17_08925 PF00990 Diguanylate cyclase, GGDEF domain LCH17_08925 PF00360 Phytochrome region LCH17_08930 PF00701 Dihydrodipicolinate synthetase family LCH17_08935 PF05175 Methyltransferase small domain LCH17_08935 PF08468 Methyltransferase small domain N-terminal LCH17_08940 PF00483 Nucleotidyl transferase LCH17_08945 PF08323 Starch synthase catalytic domain LCH17_08945 PF00534 Glycosyl transferases group 1 LCH17_08985 PF03553 Na+/H+ antiporter family LCH17_08990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_08990 PF03466 LysR substrate binding domain LCH17_08995 PF13416 Bacterial extracellular solute-binding protein LCH17_09000 PF00005 ABC transporter LCH17_09000 PF08402 TOBE domain LCH17_09005 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_09010 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_09015 PF00171 Aldehyde dehydrogenase family LCH17_09025 PF00892 EamA-like transporter family LCH17_09030 PF01037 Lrp/AsnC ligand binding domain LCH17_09035 PF14602 Hexapeptide repeat of succinyl-transferase LCH17_09035 PF12464 Maltose acetyltransferase LCH17_09040 PF00128 Alpha amylase, catalytic domain LCH17_09040 PF11941 Domain of unknown function (DUF3459) LCH17_09045 PF00367 phosphotransferase system, EIIB LCH17_09045 PF02378 Phosphotransferase system, EIIC LCH17_09050 PF00356 Bacterial regulatory proteins, lacI family LCH17_09065 PF00710 Asparaginase, N-terminal LCH17_09065 PF17763 Glutaminase/Asparaginase C-terminal domain LCH17_09080 PF02142 MGS-like domain LCH17_09090 PF00210 Ferritin-like domain LCH17_09105 PF13718 GNAT acetyltransferase 2 LCH17_09105 PF05127 Helicase LCH17_09105 PF17176 tRNA-binding domain LCH17_09105 PF08351 Domain of unknown function (DUF1726) LCH17_09115 PF00072 Response regulator receiver domain LCH17_09115 PF01584 CheW-like domain LCH17_09160 PF02660 Glycerol-3-phosphate acyltransferase LCH17_09165 PF02152 Dihydroneopterin aldolase LCH17_09170 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LCH17_09180 PF07690 Major Facilitator Superfamily LCH17_09185 PF02492 CobW/HypB/UreG, nucleotide-binding domain LCH17_09185 PF07683 Cobalamin synthesis protein cobW C-terminal domain LCH17_09190 PF04030 D-arabinono-1,4-lactone oxidase LCH17_09190 PF01565 FAD binding domain LCH17_09195 PF01810 LysE type translocator LCH17_09200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_09200 PF03466 LysR substrate binding domain LCH17_09205 PF12792 CSS motif domain associated with EAL LCH17_09205 PF00563 EAL domain LCH17_09210 PF00330 Aconitase family (aconitate hydratase) LCH17_09210 PF11791 Aconitate B N-terminal domain LCH17_09210 PF06434 Aconitate hydratase 2 N-terminus LCH17_09215 PF01734 Patatin-like phospholipase LCH17_09220 PF12729 Four helix bundle sensory module for signal transduction LCH17_09220 PF00672 HAMP domain LCH17_09220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_09225 PF12729 Four helix bundle sensory module for signal transduction LCH17_09225 PF00672 HAMP domain LCH17_09225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_09235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCH17_09235 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH17_09240 PF00364 Biotin-requiring enzyme LCH17_09240 PF02817 e3 binding domain LCH17_09240 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LCH17_09245 PF00456 Transketolase, thiamine diphosphate binding domain LCH17_09245 PF17831 Pyruvate dehydrogenase E1 component middle domain LCH17_09250 PF00392 Bacterial regulatory proteins, gntR family LCH17_09250 PF07729 FCD domain LCH17_09255 PF01510 N-acetylmuramoyl-L-alanine amidase LCH17_09265 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LCH17_09265 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LCH17_09270 PF07963 Prokaryotic N-terminal methylation motif LCH17_09275 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LCH17_09275 PF00437 Type II/IV secretion system protein LCH17_09280 PF00482 Type II secretion system (T2SS), protein F LCH17_09285 PF01478 Type IV leader peptidase family LCH17_09285 PF06750 Bacterial Peptidase A24 N-terminal domain LCH17_09290 PF01121 Dephospho-CoA kinase LCH17_09295 PF07072 Cell division protein LCH17_09300 PF03884 DNA gyrase inhibitor YacG LCH17_09305 PF00293 NUDIX domain LCH17_09315 PF02810 SEC-C motif LCH17_09315 PF07517 SecA DEAD-like domain LCH17_09315 PF01043 SecA preprotein cross-linking domain LCH17_09315 PF07516 SecA Wing and Scaffold domain LCH17_09325 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LCH17_09330 PF12327 FtsZ family, C-terminal domain LCH17_09330 PF00091 Tubulin/FtsZ family, GTPase domain LCH17_09335 PF02491 SHS2 domain inserted in FTSA LCH17_09340 PF03799 Cell division protein FtsQ LCH17_09340 PF08478 POTRA domain, FtsQ-type LCH17_09345 PF08245 Mur ligase middle domain LCH17_09345 PF02875 Mur ligase family, glutamate ligase domain LCH17_09345 PF01225 Mur ligase family, catalytic domain LCH17_09350 PF03033 Glycosyltransferase family 28 N-terminal domain LCH17_09350 PF04101 Glycosyltransferase family 28 C-terminal domain LCH17_09355 PF01098 Cell cycle protein LCH17_09360 PF02875 Mur ligase family, glutamate ligase domain LCH17_09360 PF08245 Mur ligase middle domain LCH17_09365 PF00953 Glycosyl transferase family 4 LCH17_09365 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LCH17_09370 PF08245 Mur ligase middle domain LCH17_09370 PF01225 Mur ligase family, catalytic domain LCH17_09370 PF02875 Mur ligase family, glutamate ligase domain LCH17_09375 PF01225 Mur ligase family, catalytic domain LCH17_09375 PF08245 Mur ligase middle domain LCH17_09375 PF02875 Mur ligase family, glutamate ligase domain LCH17_09380 PF00905 Penicillin binding protein transpeptidase domain LCH17_09380 PF03717 Penicillin-binding Protein dimerisation domain LCH17_09385 PF04999 Cell division protein FtsL LCH17_09390 PF01795 MraW methylase family LCH17_09395 PF02381 MraZ protein, putative antitoxin-like LCH17_09405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCH17_09410 PF04348 LppC putative lipoprotein LCH17_09415 PF02021 Uncharacterised protein family UPF0102 LCH17_09420 PF13580 SIS domain LCH17_09425 PF04972 BON domain LCH17_09430 PF04386 Stringent starvation protein B LCH17_09435 PF02798 Glutathione S-transferase, N-terminal domain LCH17_09435 PF00043 Glutathione S-transferase, C-terminal domain LCH17_09440 PF02167 Cytochrome C1 family LCH17_09445 PF00032 Cytochrome b(C-terminal)/b6/petD LCH17_09445 PF00033 Cytochrome b/b6/petB LCH17_09450 PF00355 Rieske [2Fe-2S] domain LCH17_09450 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LCH17_09455 PF00380 Ribosomal protein S9/S16 LCH17_09460 PF00572 Ribosomal protein L13 LCH17_09465 PF03969 AFG1-like ATPase LCH17_09475 PF00595 PDZ domain LCH17_09475 PF13180 PDZ domain LCH17_09480 PF13180 PDZ domain LCH17_09510 PF01979 Amidohydrolase family LCH17_09515 PF03841 L-seryl-tRNA selenium transferase LCH17_09520 PF07071 KDGP aldolase LCH17_09525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCH17_09525 PF08279 HTH domain LCH17_09525 PF05043 Mga helix-turn-helix domain LCH17_09525 PF00874 PRD domain LCH17_09530 PF00381 PTS HPr component phosphorylation site LCH17_09535 PF03668 P-loop ATPase protein family LCH17_09540 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCH17_09545 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LCH17_09550 PF04552 Sigma-54, DNA binding domain LCH17_09550 PF04963 Sigma-54 factor, core binding domain LCH17_09550 PF00309 Sigma-54 factor, Activator interacting domain (AID) LCH17_09555 PF12399 Branched-chain amino acid ATP-binding cassette transporter LCH17_09555 PF00005 ABC transporter LCH17_09560 PF03968 OstA-like protein LCH17_09565 PF06835 Lipopolysaccharide-assembly, LptC-related LCH17_09575 PF00571 CBS domain LCH17_09575 PF01380 SIS domain LCH17_09580 PF00005 ABC transporter LCH17_09585 PF02405 Permease MlaE LCH17_09590 PF02470 MlaD protein LCH17_09595 PF05494 MlaC protein LCH17_09605 PF01722 BolA-like protein LCH17_09610 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LCH17_09615 PF01523 Putative modulator of DNA gyrase LCH17_09620 PF04751 Protein of unknown function (DUF615) LCH17_09630 PF04363 Protein of unknown function (DUF496) LCH17_09660 PF07883 Cupin domain LCH17_09660 PF01381 Helix-turn-helix LCH17_09665 PF03594 Benzoate membrane transport protein LCH17_09675 PF02219 Methylenetetrahydrofolate reductase LCH17_09690 PF00672 HAMP domain LCH17_09690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_09695 PF03922 OmpW family LCH17_09700 PF00990 Diguanylate cyclase, GGDEF domain LCH17_09705 PF17760 UvrA interaction domain LCH17_09705 PF17755 UvrA DNA-binding domain LCH17_09705 PF00005 ABC transporter LCH17_09710 PF00196 Bacterial regulatory proteins, luxR family LCH17_09715 PF00436 Single-strand binding protein family LCH17_09725 PF01545 Cation efflux family LCH17_09725 PF16916 Dimerisation domain of Zinc Transporter LCH17_09735 PF00313 'Cold-shock' DNA-binding domain LCH17_09740 PF00593 TonB dependent receptor LCH17_09740 PF07715 TonB-dependent Receptor Plug Domain LCH17_09745 PF00990 Diguanylate cyclase, GGDEF domain LCH17_09745 PF08448 PAS fold LCH17_09750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_09750 PF00512 His Kinase A (phospho-acceptor) domain LCH17_09750 PF00672 HAMP domain LCH17_09755 PF00486 Transcriptional regulatory protein, C terminal LCH17_09755 PF00072 Response regulator receiver domain LCH17_09775 PF00990 Diguanylate cyclase, GGDEF domain LCH17_09785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCH17_09795 PF13538 UvrD-like helicase C-terminal domain LCH17_09800 PF13361 UvrD-like helicase C-terminal domain LCH17_09800 PF00580 UvrD/REP helicase N-terminal domain LCH17_09800 PF12705 PD-(D/E)XK nuclease superfamily LCH17_09805 PF17946 RecC C-terminal domain LCH17_09810 PF07681 DoxX LCH17_09815 PF02678 Pirin LCH17_09815 PF17954 Quercetinase C-terminal cupin domain LCH17_09825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_09825 PF03466 LysR substrate binding domain LCH17_09835 PF00392 Bacterial regulatory proteins, gntR family LCH17_09835 PF07702 UTRA domain LCH17_09850 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_09860 PF12857 TOBE-like domain LCH17_09860 PF00005 ABC transporter LCH17_09870 PF00990 Diguanylate cyclase, GGDEF domain LCH17_09890 PF00583 Acetyltransferase (GNAT) family LCH17_09895 PF06628 Catalase-related immune-responsive LCH17_09895 PF00199 Catalase LCH17_09920 PF00293 NUDIX domain LCH17_09925 PF01594 AI-2E family transporter LCH17_09935 PF04371 Porphyromonas-type peptidyl-arginine deiminase LCH17_09940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_09940 PF03466 LysR substrate binding domain LCH17_09945 PF02954 Bacterial regulatory protein, Fis family LCH17_09945 PF00989 PAS fold LCH17_09945 PF00158 Sigma-54 interaction domain LCH17_09950 PF00465 Iron-containing alcohol dehydrogenase LCH17_09955 PF03610 PTS system fructose IIA component LCH17_09955 PF00381 PTS HPr component phosphorylation site LCH17_09955 PF00391 PEP-utilising enzyme, mobile domain LCH17_09955 PF05524 PEP-utilising enzyme, N-terminal LCH17_09960 PF02734 DAK2 domain LCH17_09965 PF02733 Dak1 domain LCH17_09970 PF00860 Permease family LCH17_10005 PF01196 Ribosomal protein L17 LCH17_10010 PF01000 RNA polymerase Rpb3/RpoA insert domain LCH17_10010 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LCH17_10010 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LCH17_10015 PF00163 Ribosomal protein S4/S9 N-terminal domain LCH17_10015 PF01479 S4 domain LCH17_10020 PF00411 Ribosomal protein S11 LCH17_10025 PF00416 Ribosomal protein S13/S18 LCH17_10030 PF00444 Ribosomal protein L36 LCH17_10035 PF00344 SecY translocase LCH17_10040 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LCH17_10045 PF00327 Ribosomal protein L30p/L7e LCH17_10050 PF00333 Ribosomal protein S5, N-terminal domain LCH17_10050 PF03719 Ribosomal protein S5, C-terminal domain LCH17_10055 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LCH17_10060 PF00347 Ribosomal protein L6 LCH17_10065 PF00410 Ribosomal protein S8 LCH17_10070 PF00253 Ribosomal protein S14p/S29e LCH17_10075 PF00673 ribosomal L5P family C-terminus LCH17_10075 PF00281 Ribosomal protein L5 LCH17_10080 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LCH17_10080 PF00467 KOW motif LCH17_10085 PF00238 Ribosomal protein L14p/L23e LCH17_10090 PF00366 Ribosomal protein S17 LCH17_10095 PF00831 Ribosomal L29 protein LCH17_10100 PF00252 Ribosomal protein L16p/L10e LCH17_10105 PF07650 KH domain LCH17_10105 PF00189 Ribosomal protein S3, C-terminal domain LCH17_10110 PF00237 Ribosomal protein L22p/L17e LCH17_10115 PF00203 Ribosomal protein S19 LCH17_10120 PF00181 Ribosomal Proteins L2, RNA binding domain LCH17_10120 PF03947 Ribosomal Proteins L2, C-terminal domain LCH17_10125 PF00276 Ribosomal protein L23 LCH17_10130 PF00573 Ribosomal protein L4/L1 family LCH17_10135 PF00297 Ribosomal protein L3 LCH17_10140 PF00338 Ribosomal protein S10p/S20e LCH17_10150 PF00512 His Kinase A (phospho-acceptor) domain LCH17_10150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_10150 PF00672 HAMP domain LCH17_10155 PF00072 Response regulator receiver domain LCH17_10155 PF00486 Transcriptional regulatory protein, C terminal LCH17_10160 PF03449 Transcription elongation factor, N-terminal LCH17_10160 PF01272 Transcription elongation factor, GreA/GreB, C-term LCH17_10165 PF16921 Tex protein YqgF-like domain LCH17_10165 PF00575 S1 RNA binding domain LCH17_10165 PF09371 Tex-like protein N-terminal domain LCH17_10165 PF17674 HHH domain LCH17_10185 PF00561 alpha/beta hydrolase fold LCH17_10190 PF00156 Phosphoribosyl transferase domain LCH17_10195 PF01521 Iron-sulphur cluster biosynthesis LCH17_10195 PF01106 NifU-like domain LCH17_10200 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LCH17_10200 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LCH17_10205 PF02556 Preprotein translocase subunit SecB LCH17_10210 PF00581 Rhodanese-like domain LCH17_10215 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LCH17_10215 PF01676 Metalloenzyme superfamily LCH17_10220 PF01551 Peptidase family M23 LCH17_10230 PF00356 Bacterial regulatory proteins, lacI family LCH17_10230 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LCH17_10235 PF01081 KDPG and KHG aldolase LCH17_10240 PF00920 Dehydratase family LCH17_10245 PF01202 Shikimate kinase LCH17_10250 PF02447 GntP family permease LCH17_10255 PF13091 PLD-like domain LCH17_10260 PF00270 DEAD/DEAH box helicase LCH17_10260 PF00271 Helicase conserved C-terminal domain LCH17_10260 PF17191 RecG wedge domain LCH17_10270 PF00583 Acetyltransferase (GNAT) family LCH17_10270 PF09500 Putative thioesterase (yiiD_Cterm) LCH17_10280 PF02580 D-Tyr-tRNA(Tyr) deacylase LCH17_10285 PF03631 Virulence factor BrkB LCH17_10290 PF03144 Elongation factor Tu domain 2 LCH17_10290 PF00009 Elongation factor Tu GTP binding domain LCH17_10290 PF00679 Elongation factor G C-terminus LCH17_10295 PF03951 Glutamine synthetase, beta-Grasp domain LCH17_10295 PF00120 Glutamine synthetase, catalytic domain LCH17_10305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_10305 PF00512 His Kinase A (phospho-acceptor) domain LCH17_10305 PF00989 PAS fold LCH17_10310 PF00158 Sigma-54 interaction domain LCH17_10310 PF02954 Bacterial regulatory protein, Fis family LCH17_10310 PF00072 Response regulator receiver domain LCH17_10315 PF00962 Adenosine/AMP deaminase LCH17_10320 PF06969 HemN C-terminal domain LCH17_10320 PF04055 Radical SAM superfamily LCH17_10325 PF10675 Protein of unknown function (DUF2489) LCH17_10330 PF04220 Der GTPase activator (YihI) LCH17_10335 PF00034 Cytochrome c LCH17_10340 PF01926 50S ribosome-binding GTPase LCH17_10345 PF07369 Protein of unknown function (DUF1488) LCH17_10350 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LCH17_10350 PF01488 Shikimate / quinate 5-dehydrogenase LCH17_10350 PF08501 Shikimate dehydrogenase substrate binding domain LCH17_10355 PF01218 Coproporphyrinogen III oxidase LCH17_10360 PF01300 Telomere recombination LCH17_10365 PF00731 AIR carboxylase LCH17_10370 PF01396 Topoisomerase DNA binding C4 zinc finger LCH17_10375 PF04361 Protein of unknown function (DUF494) LCH17_10380 PF02481 DNA recombination-mediator protein A LCH17_10380 PF17782 DprA winged helix domain LCH17_10390 PF01327 Polypeptide deformylase LCH17_10395 PF02911 Formyl transferase, C-terminal domain LCH17_10395 PF00551 Formyl transferase LCH17_10400 PF01189 16S rRNA methyltransferase RsmB/F LCH17_10400 PF01029 NusB family LCH17_10405 PF02254 TrkA-N domain LCH17_10405 PF02080 TrkA-C domain LCH17_10410 PF02386 Cation transport protein LCH17_10415 PF02646 RmuC family LCH17_10430 PF02082 Transcriptional regulator LCH17_10435 PF00294 pfkB family carbohydrate kinase LCH17_10440 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LCH17_10440 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LCH17_10445 PF00958 GMP synthase C terminal domain LCH17_10445 PF02540 NAD synthase LCH17_10445 PF00117 Glutamine amidotransferase class-I LCH17_10450 PF00171 Aldehyde dehydrogenase family LCH17_10455 PF00202 Aminotransferase class-III LCH17_10460 PF07883 Cupin domain LCH17_10460 PF01381 Helix-turn-helix LCH17_10465 PF00171 Aldehyde dehydrogenase family LCH17_10475 PF00892 EamA-like transporter family LCH17_10480 PF12833 Helix-turn-helix domain LCH17_10485 PF01810 LysE type translocator LCH17_10490 PF00689 Cation transporting ATPase, C-terminus LCH17_10490 PF00690 Cation transporter/ATPase, N-terminus LCH17_10495 PF04143 Sulphur transport LCH17_10500 PF01810 LysE type translocator LCH17_10505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_10505 PF03466 LysR substrate binding domain LCH17_10510 PF06206 CpeT/CpcT family (DUF1001) LCH17_10535 PF14001 YdfZ protein LCH17_10555 PF03466 LysR substrate binding domain LCH17_10555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_10580 PF00580 UvrD/REP helicase N-terminal domain LCH17_10580 PF13361 UvrD-like helicase C-terminal domain LCH17_10595 PF02608 ABC transporter substrate-binding protein PnrA-like LCH17_10600 PF00005 ABC transporter LCH17_10605 PF02653 Branched-chain amino acid transport system / permease component LCH17_10610 PF02653 Branched-chain amino acid transport system / permease component LCH17_10615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_10615 PF03466 LysR substrate binding domain LCH17_10620 PF08240 Alcohol dehydrogenase GroES-like domain LCH17_10620 PF00107 Zinc-binding dehydrogenase LCH17_10625 PF00756 Putative esterase LCH17_10635 PF12867 DinB superfamily LCH17_10635 PF03781 Sulfatase-modifying factor enzyme 1 LCH17_10640 PF13593 SBF-like CPA transporter family (DUF4137) LCH17_10645 PF13520 Amino acid permease LCH17_10650 PF01588 Putative tRNA binding domain LCH17_10655 PF13520 Amino acid permease LCH17_10660 PF04074 YhcH/YjgK/YiaL LCH17_10670 PF00665 Integrase core domain LCH17_10675 PF01695 IstB-like ATP binding protein LCH17_10680 PF02929 Beta galactosidase small chain LCH17_10680 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LCH17_10680 PF00703 Glycosyl hydrolases family 2 LCH17_10680 PF16353 Domain of unknown function(DUF4981) LCH17_10680 PF02837 Glycosyl hydrolases family 2, sugar binding domain LCH17_10685 PF00356 Bacterial regulatory proteins, lacI family LCH17_10720 PF00132 Bacterial transferase hexapeptide (six repeats) LCH17_10725 PF01367 5'-3' exonuclease, C-terminal SAM fold LCH17_10725 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LCH17_10725 PF01612 3'-5' exonuclease LCH17_10725 PF00476 DNA polymerase family A LCH17_10735 PF06005 Cell division protein ZapB LCH17_10745 PF06426 Serine acetyltransferase, N-terminal LCH17_10745 PF00132 Bacterial transferase hexapeptide (six repeats) LCH17_10750 PF01545 Cation efflux family LCH17_10750 PF16916 Dimerisation domain of Zinc Transporter LCH17_10755 PF00486 Transcriptional regulatory protein, C terminal LCH17_10755 PF00072 Response regulator receiver domain LCH17_10760 PF00672 HAMP domain LCH17_10760 PF00512 His Kinase A (phospho-acceptor) domain LCH17_10760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_10760 PF16527 Two-component sensor protein CpxA, periplasmic domain LCH17_10765 PF00588 SpoU rRNA Methylase family LCH17_10770 PF01554 MatE LCH17_10775 PF02630 SCO1/SenC LCH17_10785 PF01726 LexA DNA binding domain LCH17_10785 PF00717 Peptidase S24-like LCH17_10790 PF01553 Acyltransferase LCH17_10795 PF01040 UbiA prenyltransferase family LCH17_10800 PF04345 Chorismate lyase LCH17_10805 PF03748 Flagellar basal body-associated protein FliL LCH17_10820 PF00107 Zinc-binding dehydrogenase LCH17_10820 PF08240 Alcohol dehydrogenase GroES-like domain LCH17_10825 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LCH17_10825 PF00356 Bacterial regulatory proteins, lacI family LCH17_10830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCH17_10840 PF03611 PTS system sugar-specific permease component LCH17_10845 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LCH17_10850 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LCH17_10855 PF00535 Glycosyl transferase family 2 LCH17_10860 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LCH17_10865 PF01467 Cytidylyltransferase-like LCH17_10870 PF04393 Protein of unknown function (DUF535) LCH17_10875 PF06827 Zinc finger found in FPG and IleRS LCH17_10875 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LCH17_10875 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LCH17_10885 PF00471 Ribosomal protein L33 LCH17_10890 PF00830 Ribosomal L28 family LCH17_10895 PF04002 RadC-like JAB domain LCH17_10900 PF02441 Flavoprotein LCH17_10900 PF04127 DNA / pantothenate metabolism flavoprotein LCH17_10905 PF00692 dUTPase LCH17_10910 PF00440 Bacterial regulatory proteins, tetR family LCH17_10915 PF00924 Mechanosensitive ion channel LCH17_10915 PF05552 Conserved TM helix LCH17_10925 PF00342 Phosphoglucose isomerase LCH17_10930 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LCH17_10930 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LCH17_10935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_10935 PF03466 LysR substrate binding domain LCH17_10950 PF00583 Acetyltransferase (GNAT) family LCH17_10950 PF13380 CoA binding domain LCH17_10950 PF13607 Succinyl-CoA ligase like flavodoxin domain LCH17_10980 PF12724 Flavodoxin domain LCH17_10985 PF02386 Cation transport protein LCH17_10990 PF09186 Domain of unknown function (DUF1949) LCH17_10990 PF01205 Uncharacterized protein family UPF0029 LCH17_10995 PF00557 Metallopeptidase family M24 LCH17_11000 PF00501 AMP-binding enzyme LCH17_11000 PF13193 AMP-binding enzyme C-terminal domain LCH17_11005 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LCH17_11005 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LCH17_11005 PF00378 Enoyl-CoA hydratase/isomerase LCH17_11010 PF02803 Thiolase, C-terminal domain LCH17_11010 PF00108 Thiolase, N-terminal domain LCH17_11015 PF00486 Transcriptional regulatory protein, C terminal LCH17_11015 PF00072 Response regulator receiver domain LCH17_11020 PF00672 HAMP domain LCH17_11020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_11020 PF00512 His Kinase A (phospho-acceptor) domain LCH17_11025 PF01547 Bacterial extracellular solute-binding protein LCH17_11035 PF01206 Sulfurtransferase TusA LCH17_11040 PF01042 Endoribonuclease L-PSP LCH17_11050 PF00691 OmpA family LCH17_11050 PF13488 Glycine zipper LCH17_11055 PF02743 Cache domain LCH17_11055 PF00672 HAMP domain LCH17_11055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_11060 PF03352 Methyladenine glycosylase LCH17_11065 PF02091 Glycyl-tRNA synthetase alpha subunit LCH17_11070 PF05746 DALR anticodon binding domain LCH17_11070 PF02092 Glycyl-tRNA synthetase beta subunit LCH17_11100 PF03222 Tryptophan/tyrosine permease family LCH17_11105 PF12801 4Fe-4S binding domain LCH17_11115 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH17_11115 PF18113 Rubredoxin binding C-terminal domain LCH17_11120 PF00258 Flavodoxin LCH17_11120 PF00753 Metallo-beta-lactamase superfamily LCH17_11120 PF00301 Rubredoxin LCH17_11125 PF01590 GAF domain LCH17_11125 PF00158 Sigma-54 interaction domain LCH17_11130 PF07702 UTRA domain LCH17_11130 PF00392 Bacterial regulatory proteins, gntR family LCH17_11135 PF00367 phosphotransferase system, EIIB LCH17_11135 PF02378 Phosphotransferase system, EIIC LCH17_11140 PF02056 Family 4 glycosyl hydrolase LCH17_11140 PF11975 Family 4 glycosyl hydrolase C-terminal domain LCH17_11145 PF00356 Bacterial regulatory proteins, lacI family LCH17_11150 PF13458 Periplasmic binding protein LCH17_11155 PF02653 Branched-chain amino acid transport system / permease component LCH17_11160 PF11862 Domain of unknown function (DUF3382) LCH17_11160 PF02653 Branched-chain amino acid transport system / permease component LCH17_11165 PF12399 Branched-chain amino acid ATP-binding cassette transporter LCH17_11165 PF00005 ABC transporter LCH17_11170 PF00005 ABC transporter LCH17_11185 PF00581 Rhodanese-like domain LCH17_11190 PF01694 Rhomboid family LCH17_11190 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LCH17_11195 PF12262 Bacterial virulence factor lipase N-terminal LCH17_11200 PF04380 Membrane fusogenic activity LCH17_11205 PF00175 Oxidoreductase NAD-binding domain LCH17_11210 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LCH17_11220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LCH17_11220 PF07498 Rho termination factor, N-terminal domain LCH17_11220 PF07497 Rho termination factor, RNA-binding domain LCH17_11225 PF00085 Thioredoxin LCH17_11230 PF00270 DEAD/DEAH box helicase LCH17_11230 PF00271 Helicase conserved C-terminal domain LCH17_11235 PF02541 Ppx/GppA phosphatase family LCH17_11245 PF04445 Putative SAM-dependent methyltransferase LCH17_11250 PF00990 Diguanylate cyclase, GGDEF domain LCH17_11250 PF03707 Bacterial signalling protein N terminal repeat LCH17_11250 PF00563 EAL domain LCH17_11255 PF01432 Peptidase family M3 LCH17_11260 PF00490 Delta-aminolevulinic acid dehydratase LCH17_11265 PF01026 TatD related DNase LCH17_11270 PF00902 Sec-independent protein translocase protein (TatC) LCH17_11275 PF02416 mttA/Hcf106 family LCH17_11280 PF02416 mttA/Hcf106 family LCH17_11285 PF03109 ABC1 family LCH17_11290 PF02036 SCP-2 sterol transfer family LCH17_11295 PF01209 ubiE/COQ5 methyltransferase family LCH17_11300 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LCH17_11305 PF07969 Amidohydrolase family LCH17_11350 PF03544 Gram-negative bacterial TonB protein C-terminal LCH17_11355 PF02472 Biopolymer transport protein ExbD/TolR LCH17_11360 PF01618 MotA/TolQ/ExbB proton channel family LCH17_11365 PF01618 MotA/TolQ/ExbB proton channel family LCH17_11375 PF00196 Bacterial regulatory proteins, luxR family LCH17_11375 PF03472 Autoinducer binding domain LCH17_11380 PF01380 SIS domain LCH17_11385 PF08220 DeoR-like helix-turn-helix domain LCH17_11385 PF00455 DeoR C terminal sensor domain LCH17_11390 PF00486 Transcriptional regulatory protein, C terminal LCH17_11390 PF00072 Response regulator receiver domain LCH17_11395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_11395 PF00512 His Kinase A (phospho-acceptor) domain LCH17_11395 PF00672 HAMP domain LCH17_11400 PF00905 Penicillin binding protein transpeptidase domain LCH17_11405 PF06123 Inner membrane protein CreD LCH17_11410 PF00132 Bacterial transferase hexapeptide (six repeats) LCH17_11410 PF14602 Hexapeptide repeat of succinyl-transferase LCH17_11410 PF12804 MobA-like NTP transferase domain LCH17_11415 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LCH17_11415 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LCH17_11420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LCH17_11420 PF02874 ATP synthase alpha/beta family, beta-barrel domain LCH17_11425 PF00231 ATP synthase LCH17_11430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LCH17_11430 PF00306 ATP synthase alpha/beta chain, C terminal domain LCH17_11430 PF02874 ATP synthase alpha/beta family, beta-barrel domain LCH17_11435 PF00213 ATP synthase delta (OSCP) subunit LCH17_11440 PF00430 ATP synthase B/B' CF(0) LCH17_11445 PF00137 ATP synthase subunit C LCH17_11450 PF00119 ATP synthase A chain LCH17_11460 PF02195 ParB-like nuclease domain LCH17_11460 PF17762 HTH domain found in ParB protein LCH17_11465 PF13614 AAA domain LCH17_11470 PF02527 rRNA small subunit methyltransferase G LCH17_11475 PF13932 GidA associated domain LCH17_11475 PF01134 Glucose inhibited division protein A LCH17_11480 PF00258 Flavodoxin LCH17_11485 PF00593 TonB dependent receptor LCH17_11485 PF07715 TonB-dependent Receptor Plug Domain LCH17_11490 PF00005 ABC transporter LCH17_11495 PF00005 ABC transporter LCH17_11505 PF01032 FecCD transport family LCH17_11510 PF10396 GTP-binding protein TrmE N-terminus LCH17_11510 PF12631 MnmE helical domain LCH17_11510 PF01926 50S ribosome-binding GTPase LCH17_11515 PF14849 YidC periplasmic domain LCH17_11515 PF02096 60Kd inner membrane protein LCH17_11520 PF01809 Putative membrane protein insertion efficiency factor LCH17_11525 PF00825 Ribonuclease P LCH17_11530 PF00468 Ribosomal protein L34 LCH17_11535 PF00005 ABC transporter LCH17_11540 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_11545 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH17_11550 PF00308 Bacterial dnaA protein LCH17_11550 PF08299 Bacterial dnaA protein helix-turn-helix LCH17_11550 PF11638 DnaA N-terminal domain LCH17_11555 PF00712 DNA polymerase III beta subunit, N-terminal domain LCH17_11555 PF02767 DNA polymerase III beta subunit, central domain LCH17_11555 PF02768 DNA polymerase III beta subunit, C-terminal domain LCH17_11560 PF02463 RecF/RecN/SMC N terminal domain LCH17_11565 PF01751 Toprim domain LCH17_11565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_11565 PF00986 DNA gyrase B subunit, carboxyl terminus LCH17_11565 PF18053 DNA gyrase B subunit insert domain LCH17_11565 PF00204 DNA gyrase B LCH17_11575 PF08279 HTH domain LCH17_11575 PF13280 WYL domain LCH17_11580 PF00011 Hsp20/alpha crystallin family LCH17_11585 PF00011 Hsp20/alpha crystallin family LCH17_11590 PF00155 Aminotransferase class I and II LCH17_11605 PF07690 Major Facilitator Superfamily LCH17_11610 PF00486 Transcriptional regulatory protein, C terminal LCH17_11610 PF00072 Response regulator receiver domain LCH17_11615 PF13493 Domain of unknown function (DUF4118) LCH17_11615 PF13492 GAF domain LCH17_11615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_11615 PF00512 His Kinase A (phospho-acceptor) domain LCH17_11615 PF02702 Osmosensitive K+ channel His kinase sensor domain LCH17_11620 PF02669 K+-transporting ATPase, c chain LCH17_11630 PF03814 Potassium-transporting ATPase A subunit LCH17_11635 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH17_11635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCH17_11640 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH17_11640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_11640 PF00512 His Kinase A (phospho-acceptor) domain LCH17_11645 PF00873 AcrB/AcrD/AcrF family LCH17_11650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCH17_11655 PF00440 Bacterial regulatory proteins, tetR family LCH17_11685 PF00224 Pyruvate kinase, barrel domain LCH17_11685 PF02887 Pyruvate kinase, alpha/beta domain LCH17_11690 PF07690 Major Facilitator Superfamily LCH17_11700 PF00672 HAMP domain LCH17_11700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_11700 PF00512 His Kinase A (phospho-acceptor) domain LCH17_11705 PF02954 Bacterial regulatory protein, Fis family LCH17_11705 PF00072 Response regulator receiver domain LCH17_11705 PF14532 Sigma-54 interaction domain LCH17_11720 PF12146 Serine aminopeptidase, S33 LCH17_11725 PF00132 Bacterial transferase hexapeptide (six repeats) LCH17_11730 PF12105 SpoU, rRNA methylase, C-terminal LCH17_11730 PF00588 SpoU rRNA Methylase family LCH17_11735 PF13291 ACT domain LCH17_11735 PF04607 Region found in RelA / SpoT proteins LCH17_11735 PF02824 TGS domain LCH17_11740 PF01192 RNA polymerase Rpb6 LCH17_11745 PF00625 Guanylate kinase LCH17_11750 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LCH17_11765 PF00892 EamA-like transporter family LCH17_11785 PF03466 LysR substrate binding domain LCH17_11785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_11790 PF00579 tRNA synthetases class I (W and Y) LCH17_11795 PF00582 Universal stress protein family LCH17_11800 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LCH17_11800 PF12241 Trans-2-enoyl-CoA reductase catalytic region LCH17_11800 PF07055 Enoyl reductase FAD binding domain LCH17_11805 PF00990 Diguanylate cyclase, GGDEF domain LCH17_11810 PF00210 Ferritin-like domain LCH17_11820 PF07690 Major Facilitator Superfamily LCH17_11825 PF01810 LysE type translocator LCH17_11840 PF15976 CS1-pili formation C-terminal LCH17_11840 PF16967 E-set like domain LCH17_11845 PF18649 EcpB C-terminal domain LCH17_11850 PF16449 Fimbrillin MatB LCH17_11855 PF00196 Bacterial regulatory proteins, luxR family LCH17_11855 PF00072 Response regulator receiver domain LCH17_11860 PF00072 Response regulator receiver domain LCH17_11860 PF00989 PAS fold LCH17_11860 PF01627 Hpt domain LCH17_11860 PF00512 His Kinase A (phospho-acceptor) domain LCH17_11860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_11860 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH17_11870 PF07694 5TMR of 5TMR-LYT LCH17_11870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_11870 PF06580 Histidine kinase LCH17_11875 PF00072 Response regulator receiver domain LCH17_11875 PF04397 LytTr DNA-binding domain LCH17_11880 PF07690 Major Facilitator Superfamily LCH17_11885 PF02222 ATP-grasp domain LCH17_11885 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LCH17_11890 PF00731 AIR carboxylase LCH17_11905 PF03466 LysR substrate binding domain LCH17_11905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_11910 PF00593 TonB dependent receptor LCH17_11910 PF07715 TonB-dependent Receptor Plug Domain LCH17_11915 PF01177 Asp/Glu/Hydantoin racemase LCH17_11950 PF00899 ThiF family LCH17_11955 PF02657 Fe-S metabolism associated domain LCH17_11960 PF00266 Aminotransferase class-V LCH17_11965 PF13361 UvrD-like helicase C-terminal domain LCH17_11965 PF00580 UvrD/REP helicase N-terminal domain LCH17_11970 PF00563 EAL domain LCH17_11970 PF00990 Diguanylate cyclase, GGDEF domain LCH17_11970 PF03707 Bacterial signalling protein N terminal repeat LCH17_11975 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LCH17_11980 PF08240 Alcohol dehydrogenase GroES-like domain LCH17_11980 PF00107 Zinc-binding dehydrogenase LCH17_11985 PF00155 Aminotransferase class I and II LCH17_11990 PF00440 Bacterial regulatory proteins, tetR family LCH17_11990 PF08360 QacR-like protein, C-terminal region LCH17_11995 PF01370 NAD dependent epimerase/dehydratase family LCH17_12010 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) LCH17_12030 PF08340 Domain of unknown function (DUF1732) LCH17_12030 PF03755 YicC-like family, N-terminal region LCH17_12035 PF01138 3' exoribonuclease family, domain 1 LCH17_12035 PF03725 3' exoribonuclease family, domain 2 LCH17_12040 PF00156 Phosphoribosyl transferase domain LCH17_12045 PF00403 Heavy-metal-associated domain LCH17_12050 PF09278 MerR, DNA binding LCH17_12050 PF00376 MerR family regulatory protein LCH17_12055 PF00360 Phytochrome region LCH17_12055 PF00990 Diguanylate cyclase, GGDEF domain LCH17_12055 PF01590 GAF domain LCH17_12055 PF00563 EAL domain LCH17_12060 PF06288 Protein of unknown function (DUF1040) LCH17_12065 PF12801 4Fe-4S binding domain LCH17_12065 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LCH17_12065 PF13746 4Fe-4S dicluster domain LCH17_12070 PF01636 Phosphotransferase enzyme family LCH17_12075 PF01323 DSBA-like thioredoxin domain LCH17_12080 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LCH17_12080 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LCH17_12085 PF00857 Isochorismatase family LCH17_12095 PF04463 Protein of unknown function (DUF523) LCH17_12100 PF01553 Acyltransferase LCH17_12105 PF01553 Acyltransferase LCH17_12110 PF13335 Magnesium chelatase, subunit ChlI C-terminal LCH17_12110 PF01078 Magnesium chelatase, subunit ChlI LCH17_12115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LCH17_12115 PF00205 Thiamine pyrophosphate enzyme, central domain LCH17_12115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LCH17_12125 PF01063 Amino-transferase class IV LCH17_12130 PF00920 Dehydratase family LCH17_12135 PF00585 C-terminal regulatory domain of Threonine dehydratase LCH17_12135 PF00291 Pyridoxal-phosphate dependent enzyme LCH17_12140 PF01389 OmpA-like transmembrane domain LCH17_12140 PF00691 OmpA family LCH17_12150 PF00270 DEAD/DEAH box helicase LCH17_12150 PF00271 Helicase conserved C-terminal domain LCH17_12150 PF17764 3′ DNA-binding domain (3′BD) LCH17_12150 PF18074 Primosomal protein N C-terminal domain LCH17_12150 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LCH17_12155 PF01197 Ribosomal protein L31 LCH17_12160 PF11066 Protein of unknown function (DUF2867) LCH17_12160 PF13460 NAD(P)H-binding LCH17_12165 PF03949 Malic enzyme, NAD binding domain LCH17_12165 PF00390 Malic enzyme, N-terminal domain LCH17_12175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_12175 PF00672 HAMP domain LCH17_12175 PF00512 His Kinase A (phospho-acceptor) domain LCH17_12180 PF00486 Transcriptional regulatory protein, C terminal LCH17_12180 PF00072 Response regulator receiver domain LCH17_12185 PF05958 tRNA (Uracil-5-)-methyltransferase LCH17_12200 PF00128 Alpha amylase, catalytic domain LCH17_12200 PF02903 Alpha amylase, N-terminal ig-like domain LCH17_12215 PF00012 Hsp70 protein LCH17_12220 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LCH17_12220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCH17_12225 PF05981 CreA protein LCH17_12240 PF01258 Prokaryotic dksA/traR C4-type zinc finger LCH17_12245 PF00120 Glutamine synthetase, catalytic domain LCH17_12250 PF00202 Aminotransferase class-III LCH17_12255 PF13416 Bacterial extracellular solute-binding protein LCH17_12260 PF13416 Bacterial extracellular solute-binding protein LCH17_12265 PF00005 ABC transporter LCH17_12265 PF08402 TOBE domain LCH17_12270 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_12275 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_12280 PF03475 3-alpha domain LCH17_12280 PF03473 MOSC domain LCH17_12295 PF03061 Thioesterase superfamily LCH17_12300 PF09382 RQC domain LCH17_12300 PF16124 RecQ zinc-binding LCH17_12300 PF00270 DEAD/DEAH box helicase LCH17_12300 PF00271 Helicase conserved C-terminal domain LCH17_12300 PF00570 HRDC domain LCH17_12305 PF00034 Cytochrome c LCH17_12310 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LCH17_12320 PF02592 Putative vitamin uptake transporter LCH17_12325 PF03737 Aldolase/RraA LCH17_12330 PF00672 HAMP domain LCH17_12330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_12335 PF00571 CBS domain LCH17_12335 PF01769 Divalent cation transporter LCH17_12335 PF03448 MgtE intracellular N domain LCH17_12340 PF14824 Sirohaem biosynthesis protein central LCH17_12340 PF10414 Sirohaem synthase dimerisation region LCH17_12340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCH17_12345 PF01226 Formate/nitrite transporter LCH17_12350 PF13806 Rieske-like [2Fe-2S] domain LCH17_12355 PF18267 Rubredoxin NAD+ reductase C-terminal domain LCH17_12355 PF04324 BFD-like [2Fe-2S] binding domain LCH17_12355 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LCH17_12355 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LCH17_12355 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH17_12360 PF03466 LysR substrate binding domain LCH17_12360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_12365 PF07690 Major Facilitator Superfamily LCH17_12370 PF00004 ATPase family associated with various cellular activities (AAA) LCH17_12370 PF07724 AAA domain (Cdc48 subfamily) LCH17_12370 PF10431 C-terminal, D2-small domain, of ClpB protein LCH17_12375 PF00227 Proteasome subunit LCH17_12385 PF00750 tRNA synthetases class I (R) LCH17_12385 PF03485 Arginyl tRNA synthetase N terminal domain LCH17_12385 PF05746 DALR anticodon binding domain LCH17_12395 PF04545 Sigma-70, region 4 LCH17_12395 PF04542 Sigma-70 region 2 LCH17_12400 PF12973 ChrR Cupin-like domain LCH17_12405 PF02673 Bacitracin resistance protein BacA LCH17_12410 PF00248 Aldo/keto reductase family LCH17_12415 PF01263 Aldose 1-epimerase LCH17_12420 PF10509 Galactokinase galactose-binding signature LCH17_12420 PF08544 GHMP kinases C terminal LCH17_12420 PF00288 GHMP kinases N terminal domain LCH17_12425 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LCH17_12425 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LCH17_12430 PF16363 GDP-mannose 4,6 dehydratase LCH17_12435 PF00356 Bacterial regulatory proteins, lacI family LCH17_12440 PF16353 Domain of unknown function(DUF4981) LCH17_12440 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LCH17_12440 PF02837 Glycosyl hydrolases family 2, sugar binding domain LCH17_12440 PF02929 Beta galactosidase small chain LCH17_12440 PF00703 Glycosyl hydrolases family 2 LCH17_12445 PF13407 Periplasmic binding protein domain LCH17_12450 PF00005 ABC transporter LCH17_12455 PF02653 Branched-chain amino acid transport system / permease component LCH17_12460 PF02743 Cache domain LCH17_12460 PF00672 HAMP domain LCH17_12460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_12485 PF00696 Amino acid kinase family LCH17_12490 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LCH17_12490 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LCH17_12495 PF03606 C4-dicarboxylate anaerobic carrier LCH17_12500 PF01316 Arginine repressor, DNA binding domain LCH17_12500 PF02863 Arginine repressor, C-terminal domain LCH17_12505 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LCH17_12505 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LCH17_12510 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LCH17_12510 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LCH17_12530 PF02666 Phosphatidylserine decarboxylase LCH17_12535 PF02743 Cache domain LCH17_12535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_12535 PF00672 HAMP domain LCH17_12540 PF08212 Lipocalin-like domain LCH17_12545 PF06719 AraC-type transcriptional regulator N-terminus LCH17_12545 PF12833 Helix-turn-helix domain LCH17_12550 PF00465 Iron-containing alcohol dehydrogenase LCH17_12555 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LCH17_12555 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LCH17_12555 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LCH17_12560 PF02233 NAD(P) transhydrogenase beta subunit LCH17_12570 PF03313 Serine dehydratase alpha chain LCH17_12575 PF00375 Sodium:dicarboxylate symporter family LCH17_12580 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH17_12580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCH17_12585 PF13525 Outer membrane lipoprotein LCH17_12590 PF01479 S4 domain LCH17_12590 PF00849 RNA pseudouridylate synthase LCH17_12595 PF02578 Multi-copper polyphenol oxidoreductase laccase LCH17_12600 PF00004 ATPase family associated with various cellular activities (AAA) LCH17_12600 PF07724 AAA domain (Cdc48 subfamily) LCH17_12600 PF17871 AAA lid domain LCH17_12600 PF02861 Clp amino terminal domain, pathogenicity island component LCH17_12600 PF10431 C-terminal, D2-small domain, of ClpB protein LCH17_12610 PF03590 Aspartate-ammonia ligase LCH17_12615 PF01037 Lrp/AsnC ligand binding domain LCH17_12625 PF10063 Uncharacterized integral membrane protein (DUF2301) LCH17_12630 PF00571 CBS domain LCH17_12630 PF00478 IMP dehydrogenase / GMP reductase domain LCH17_12650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_12650 PF00512 His Kinase A (phospho-acceptor) domain LCH17_12660 PF00072 Response regulator receiver domain LCH17_12660 PF00158 Sigma-54 interaction domain LCH17_12665 PF06496 Protein of unknown function (DUF1097) LCH17_12670 PF00174 Oxidoreductase molybdopterin binding domain LCH17_12675 PF01794 Ferric reductase like transmembrane component LCH17_12690 PF00072 Response regulator receiver domain LCH17_12690 PF00486 Transcriptional regulatory protein, C terminal LCH17_12695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_12705 PF00384 Molybdopterin oxidoreductase LCH17_12705 PF18364 Molybdopterin oxidoreductase N-terminal domain LCH17_12705 PF01568 Molydopterin dinucleotide binding domain LCH17_12710 PF03264 NapC/NirT cytochrome c family, N-terminal region LCH17_12715 PF01131 DNA topoisomerase LCH17_12715 PF01751 Toprim domain LCH17_12730 PF12852 Cupin LCH17_12730 PF12833 Helix-turn-helix domain LCH17_12735 PF02386 Cation transport protein LCH17_12740 PF02080 TrkA-C domain LCH17_12740 PF02254 TrkA-N domain LCH17_12745 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LCH17_12745 PF01565 FAD binding domain LCH17_12750 PF08279 HTH domain LCH17_12750 PF03099 Biotin/lipoate A/B protein ligase family LCH17_12750 PF02237 Biotin protein ligase C terminal domain LCH17_12755 PF00485 Phosphoribulokinase / Uridine kinase family LCH17_12770 PF00009 Elongation factor Tu GTP binding domain LCH17_12770 PF03144 Elongation factor Tu domain 2 LCH17_12770 PF03143 Elongation factor Tu C-terminal domain LCH17_12780 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LCH17_12785 PF02357 Transcription termination factor nusG LCH17_12785 PF00467 KOW motif LCH17_12790 PF00298 Ribosomal protein L11, RNA binding domain LCH17_12790 PF03946 Ribosomal protein L11, N-terminal domain LCH17_12795 PF00687 Ribosomal protein L1p/L10e family LCH17_12800 PF00466 Ribosomal protein L10 LCH17_12805 PF00542 Ribosomal protein L7/L12 C-terminal domain LCH17_12805 PF16320 Ribosomal protein L7/L12 dimerisation domain LCH17_12810 PF10385 RNA polymerase beta subunit external 1 domain LCH17_12810 PF04560 RNA polymerase Rpb2, domain 7 LCH17_12810 PF00562 RNA polymerase Rpb2, domain 6 LCH17_12810 PF04565 RNA polymerase Rpb2, domain 3 LCH17_12810 PF04563 RNA polymerase beta subunit LCH17_12810 PF04561 RNA polymerase Rpb2, domain 2 LCH17_12815 PF04997 RNA polymerase Rpb1, domain 1 LCH17_12815 PF00623 RNA polymerase Rpb1, domain 2 LCH17_12815 PF04983 RNA polymerase Rpb1, domain 3 LCH17_12815 PF05000 RNA polymerase Rpb1, domain 4 LCH17_12815 PF04998 RNA polymerase Rpb1, domain 5 LCH17_12820 PF13309 HTH domain LCH17_12820 PF08348 YheO-like PAS domain LCH17_12825 PF01042 Endoribonuclease L-PSP LCH17_12830 PF02635 DsrE/DsrF-like family LCH17_12835 PF02635 DsrE/DsrF-like family LCH17_12840 PF04077 DsrH like protein LCH17_12845 PF00164 Ribosomal protein S12/S23 LCH17_12850 PF00177 Ribosomal protein S7p/S5e LCH17_12855 PF00679 Elongation factor G C-terminus LCH17_12855 PF14492 Elongation Factor G, domain II LCH17_12855 PF03144 Elongation factor Tu domain 2 LCH17_12855 PF00009 Elongation factor Tu GTP binding domain LCH17_12855 PF03764 Elongation factor G, domain IV LCH17_12860 PF00009 Elongation factor Tu GTP binding domain LCH17_12860 PF03144 Elongation factor Tu domain 2 LCH17_12860 PF03143 Elongation factor Tu C-terminal domain LCH17_12905 PF00999 Sodium/hydrogen exchanger family LCH17_12905 PF02254 TrkA-N domain LCH17_12910 PF02525 Flavodoxin-like fold LCH17_12915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_12915 PF03466 LysR substrate binding domain LCH17_12920 PF00106 short chain dehydrogenase LCH17_12935 PF00326 Prolyl oligopeptidase family LCH17_12935 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LCH17_12955 PF07947 YhhN family LCH17_12960 PF07690 Major Facilitator Superfamily LCH17_12965 PF13533 Biotin-lipoyl like LCH17_12970 PF03466 LysR substrate binding domain LCH17_12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_12980 PF00375 Sodium:dicarboxylate symporter family LCH17_12985 PF10678 Protein of unknown function (DUF2492) LCH17_12990 PF01914 MarC family integral membrane protein LCH17_12995 PF03466 LysR substrate binding domain LCH17_12995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_13000 PF02416 mttA/Hcf106 family LCH17_13010 PF01464 Transglycosylase SLT domain LCH17_13020 PF13091 PLD-like domain LCH17_13030 PF00440 Bacterial regulatory proteins, tetR family LCH17_13035 PF07226 Protein of unknown function (DUF1422) LCH17_13050 PF02881 SRP54-type protein, helical bundle domain LCH17_13050 PF00448 SRP54-type protein, GTPase domain LCH17_13055 PF00005 ABC transporter LCH17_13060 PF18075 FtsX extracellular domain LCH17_13065 PF00140 Sigma-70 factor, region 1.2 LCH17_13065 PF04542 Sigma-70 region 2 LCH17_13065 PF04545 Sigma-70, region 4 LCH17_13070 PF00484 Carbonic anhydrase LCH17_13075 PF00392 Bacterial regulatory proteins, gntR family LCH17_13075 PF07702 UTRA domain LCH17_13080 PF01979 Amidohydrolase family LCH17_13085 PF00491 Arginase family LCH17_13090 PF17392 Urocanase C-terminal domain LCH17_13090 PF17391 Urocanase N-terminal domain LCH17_13090 PF01175 Urocanase Rossmann-like domain LCH17_13095 PF00221 Aromatic amino acid lyase LCH17_13100 PF01699 Sodium/calcium exchanger protein LCH17_13105 PF12792 CSS motif domain associated with EAL LCH17_13105 PF00563 EAL domain LCH17_13110 PF00563 EAL domain LCH17_13110 PF17157 Gammaproteobacterial periplasmic sensor domain LCH17_13110 PF00990 Diguanylate cyclase, GGDEF domain LCH17_13140 PF00263 Bacterial type II and III secretion system protein LCH17_13140 PF03958 Bacterial type II/III secretion system short domain LCH17_13155 PF00437 Type II/IV secretion system protein LCH17_13155 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LCH17_13160 PF00482 Type II secretion system (T2SS), protein F LCH17_13170 PF07963 Prokaryotic N-terminal methylation motif LCH17_13180 PF07963 Prokaryotic N-terminal methylation motif LCH17_13180 PF00114 Pilin (bacterial filament) LCH17_13210 PF04085 rod shape-determining protein MreC LCH17_13215 PF04093 rod shape-determining protein MreD LCH17_13220 PF02545 Maf-like protein LCH17_13225 PF10150 Ribonuclease E/G family LCH17_13225 PF00575 S1 RNA binding domain LCH17_13230 PF13116 Protein of unknown function LCH17_13230 PF13502 AsmA-like C-terminal region LCH17_13240 PF00795 Carbon-nitrogen hydrolase LCH17_13245 PF01523 Putative modulator of DNA gyrase LCH17_13250 PF01380 SIS domain LCH17_13250 PF01418 Helix-turn-helix domain, rpiR family LCH17_13265 PF00367 phosphotransferase system, EIIB LCH17_13265 PF02378 Phosphotransferase system, EIIC LCH17_13270 PF13580 SIS domain LCH17_13280 PF01914 MarC family integral membrane protein LCH17_13285 PF07690 Major Facilitator Superfamily LCH17_13295 PF00072 Response regulator receiver domain LCH17_13300 PF00672 HAMP domain LCH17_13300 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LCH17_13300 PF00072 Response regulator receiver domain LCH17_13300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_13300 PF00512 His Kinase A (phospho-acceptor) domain LCH17_13300 PF01627 Hpt domain LCH17_13305 PF13581 Histidine kinase-like ATPase domain LCH17_13310 PF01740 STAS domain LCH17_13310 PF08678 Rsbr N terminal LCH17_13315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_13315 PF08447 PAS fold LCH17_13315 PF13426 PAS domain LCH17_13330 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LCH17_13335 PF04228 Putative neutral zinc metallopeptidase LCH17_13345 PF08668 HDOD domain LCH17_13360 PF00999 Sodium/hydrogen exchanger family LCH17_13365 PF02607 B12 binding domain LCH17_13365 PF02310 B12 binding domain LCH17_13365 PF02965 Vitamin B12 dependent methionine synthase, activation domain LCH17_13365 PF00809 Pterin binding enzyme LCH17_13365 PF02574 Homocysteine S-methyltransferase LCH17_13370 PF08443 RimK-like ATP-grasp domain LCH17_13370 PF18030 RimK PreATP-grasp domain LCH17_13375 PF05525 Branched-chain amino acid transport protein LCH17_13380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_13385 PF00072 Response regulator receiver domain LCH17_13385 PF00486 Transcriptional regulatory protein, C terminal LCH17_13400 PF05935 Arylsulfotransferase (ASST) LCH17_13400 PF17425 Arylsulfotransferase Ig-like domain LCH17_13405 PF03440 Aerolysin/Pertussis toxin (APT) domain LCH17_13405 PF01117 Aerolysin toxin LCH17_13410 PF01964 Radical SAM ThiC family LCH17_13410 PF13667 ThiC-associated domain LCH17_13415 PF02581 Thiamine monophosphate synthase LCH17_13420 PF00899 ThiF family LCH17_13430 PF05690 Thiazole biosynthesis protein ThiG LCH17_13435 PF04055 Radical SAM superfamily LCH17_13435 PF06968 Biotin and Thiamin Synthesis associated domain LCH17_13455 PF13036 Peptidoglycan-synthase activator LpoB LCH17_13475 PF17151 Periplasmic sensor domain LCH17_13475 PF00990 Diguanylate cyclase, GGDEF domain LCH17_13485 PF06055 Exopolysaccharide synthesis, ExoD LCH17_13500 PF08803 Putative mono-oxygenase ydhR LCH17_13505 PF01638 HxlR-like helix-turn-helix LCH17_13530 PF00593 TonB dependent receptor LCH17_13530 PF07715 TonB-dependent Receptor Plug Domain LCH17_13545 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LCH17_13550 PF03692 Putative zinc- or iron-chelating domain LCH17_13560 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LCH17_13565 PF02602 Uroporphyrinogen-III synthase HemD LCH17_13570 PF03900 Porphobilinogen deaminase, C-terminal domain LCH17_13570 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LCH17_13575 PF12633 Adenylate cyclase NT domain LCH17_13575 PF01295 Adenylate cyclase, class-I LCH17_13580 PF02230 Phospholipase/Carboxylesterase LCH17_13585 PF01491 Frataxin-like domain LCH17_13595 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LCH17_13595 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LCH17_13600 PF01678 Diaminopimelate epimerase LCH17_13610 PF00589 Phage integrase family LCH17_13610 PF02899 Phage integrase, N-terminal SAM-like domain LCH17_13615 PF13419 Haloacid dehalogenase-like hydrolase LCH17_13625 PF13545 Crp-like helix-turn-helix domain LCH17_13625 PF00027 Cyclic nucleotide-binding domain LCH17_13635 PF07722 Peptidase C26 LCH17_13655 PF00005 ABC transporter LCH17_13665 PF00994 Probable molybdopterin binding domain LCH17_13665 PF02464 Competence-damaged protein LCH17_13670 PF00013 KH domain LCH17_13670 PF01966 HD domain LCH17_13670 PF12072 Domain of unknown function (DUF3552) LCH17_13675 PF04204 Homoserine O-succinyltransferase LCH17_13685 PF01037 Lrp/AsnC ligand binding domain LCH17_13690 PF00884 Sulfatase LCH17_13705 PF02903 Alpha amylase, N-terminal ig-like domain LCH17_13705 PF16657 Maltogenic Amylase, C-terminal domain LCH17_13705 PF00128 Alpha amylase, catalytic domain LCH17_13710 PF02308 MgtC family LCH17_13730 PF00106 short chain dehydrogenase LCH17_13735 PF03577 Peptidase family C69 LCH17_13750 PF00465 Iron-containing alcohol dehydrogenase LCH17_13760 PF01053 Cys/Met metabolism PLP-dependent enzyme LCH17_13770 PF12793 Sugar transport-related sRNA regulator N-term LCH17_13770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCH17_13785 PF03280 Proteobacterial lipase chaperone protein LCH17_13790 PF00561 alpha/beta hydrolase fold LCH17_13800 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LCH17_13800 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LCH17_13805 PF02698 DUF218 domain LCH17_13810 PF01752 Collagenase LCH17_13810 PF08453 Peptidase family M9 N-terminal LCH17_13820 PF00419 Fimbrial protein LCH17_13830 PF00577 Outer membrane usher protein LCH17_13830 PF13953 PapC C-terminal domain LCH17_13830 PF13954 PapC N-terminal domain LCH17_13835 PF02753 Pili assembly chaperone PapD, C-terminal domain LCH17_13835 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LCH17_13845 PF00419 Fimbrial protein LCH17_13855 PF00501 AMP-binding enzyme LCH17_13860 PF13378 Enolase C-terminal domain-like LCH17_13865 PF00378 Enoyl-CoA hydratase/isomerase LCH17_13870 PF12697 Alpha/beta hydrolase family LCH17_13875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LCH17_13875 PF16582 Middle domain of thiamine pyrophosphate LCH17_13875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LCH17_13880 PF00425 chorismate binding enzyme LCH17_13885 PF01040 UbiA prenyltransferase family LCH17_13910 PF03880 DbpA RNA binding domain LCH17_13910 PF00270 DEAD/DEAH box helicase LCH17_13910 PF00271 Helicase conserved C-terminal domain LCH17_13915 PF01773 Na+ dependent nucleoside transporter N-terminus LCH17_13915 PF07670 Nucleoside recognition LCH17_13915 PF07662 Na+ dependent nucleoside transporter C-terminus LCH17_13920 PF04307 LexA-binding, inner membrane-associated putative hydrolase LCH17_13935 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LCH17_13940 PF01544 CorA-like Mg2+ transporter protein LCH17_13960 PF03471 Transporter associated domain LCH17_13960 PF00999 Sodium/hydrogen exchanger family LCH17_13960 PF02080 TrkA-C domain LCH17_13965 PF05068 Mannitol repressor LCH17_13970 PF01232 Mannitol dehydrogenase Rossmann domain LCH17_13970 PF08125 Mannitol dehydrogenase C-terminal domain LCH17_13975 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LCH17_13975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCH17_13975 PF02378 Phosphotransferase system, EIIC LCH17_13985 PF00440 Bacterial regulatory proteins, tetR family LCH17_13990 PF17876 Cold shock domain LCH17_13990 PF00773 RNB domain LCH17_13990 PF08206 Ribonuclease B OB domain LCH17_13995 PF03466 LysR substrate binding domain LCH17_13995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_14000 PF00765 Autoinducer synthase LCH17_14005 PF00196 Bacterial regulatory proteins, luxR family LCH17_14005 PF03472 Autoinducer binding domain LCH17_14010 PF01810 LysE type translocator LCH17_14015 PF00149 Calcineurin-like phosphoesterase LCH17_14015 PF02872 5'-nucleotidase, C-terminal domain LCH17_14020 PF05433 Glycine zipper 2TM domain LCH17_14025 PF00583 Acetyltransferase (GNAT) family LCH17_14030 PF11756 Nitrous oxide-stimulated promoter LCH17_14035 PF01321 Creatinase/Prolidase N-terminal domain LCH17_14035 PF00557 Metallopeptidase family M24 LCH17_14040 PF00392 Bacterial regulatory proteins, gntR family LCH17_14045 PF01293 Phosphoenolpyruvate carboxykinase LCH17_14050 PF01430 Hsp33 protein LCH17_14055 PF01479 S4 domain LCH17_14060 PF11356 Type II secretion system protein C LCH17_14065 PF00263 Bacterial type II and III secretion system protein LCH17_14065 PF03958 Bacterial type II/III secretion system short domain LCH17_14070 PF00437 Type II/IV secretion system protein LCH17_14075 PF00482 Type II secretion system (T2SS), protein F LCH17_14080 PF07963 Prokaryotic N-terminal methylation motif LCH17_14080 PF08334 Type II secretion system (T2SS), protein G LCH17_14090 PF02501 Type II secretion system (T2SS), protein I LCH17_14090 PF07963 Prokaryotic N-terminal methylation motif LCH17_14095 PF07963 Prokaryotic N-terminal methylation motif LCH17_14095 PF11612 Type II secretion system (T2SS), protein J LCH17_14100 PF03934 Type II secretion system (T2SS), protein K LCH17_14105 PF12693 GspL periplasmic domain LCH17_14105 PF05134 Type II secretion system (T2SS), protein L LCH17_14110 PF04612 Type II secretion system (T2SS), protein M LCH17_14115 PF01203 Type II secretion system (T2SS), protein N LCH17_14120 PF00196 Bacterial regulatory proteins, luxR family LCH17_14125 PF00579 tRNA synthetases class I (W and Y) LCH17_14125 PF01479 S4 domain LCH17_14130 PF13419 Haloacid dehalogenase-like hydrolase LCH17_14135 PF00293 NUDIX domain LCH17_14140 PF00459 Inositol monophosphatase family LCH17_14145 PF03222 Tryptophan/tyrosine permease family LCH17_14150 PF01588 Putative tRNA binding domain LCH17_14155 PF06445 GyrI-like small molecule binding domain LCH17_14155 PF12833 Helix-turn-helix domain LCH17_14160 PF01340 Met Apo-repressor, MetJ LCH17_14165 PF01053 Cys/Met metabolism PLP-dependent enzyme LCH17_14170 PF00696 Amino acid kinase family LCH17_14170 PF00742 Homoserine dehydrogenase LCH17_14170 PF03447 Homoserine dehydrogenase, NAD binding domain LCH17_14175 PF00311 Phosphoenolpyruvate carboxylase LCH17_14180 PF07687 Peptidase dimerisation domain LCH17_14180 PF01546 Peptidase family M20/M25/M40 LCH17_14185 PF01118 Semialdehyde dehydrogenase, NAD binding domain LCH17_14185 PF02774 Semialdehyde dehydrogenase, dimerisation domain LCH17_14190 PF00696 Amino acid kinase family LCH17_14195 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LCH17_14195 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LCH17_14200 PF00764 Arginosuccinate synthase LCH17_14205 PF14698 Argininosuccinate lyase C-terminal LCH17_14205 PF00206 Lyase LCH17_14225 PF12464 Maltose acetyltransferase LCH17_14225 PF14602 Hexapeptide repeat of succinyl-transferase LCH17_14230 PF13194 Domain of unknown function (DUF4010) LCH17_14245 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_14250 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_14255 PF00005 ABC transporter LCH17_14255 PF12857 TOBE-like domain LCH17_14260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_14260 PF03466 LysR substrate binding domain LCH17_14265 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LCH17_14265 PF18416 N-acetylglucosamine binding protein domain 2 LCH17_14270 PF00672 HAMP domain LCH17_14270 PF12729 Four helix bundle sensory module for signal transduction LCH17_14270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_14300 PF14684 Tricorn protease C1 domain LCH17_14300 PF03572 Peptidase family S41 LCH17_14300 PF07676 WD40-like Beta Propeller Repeat LCH17_14300 PF14685 Tricorn protease PDZ domain LCH17_14320 PF11230 Protein of unknown function (DUF3029) LCH17_14325 PF04055 Radical SAM superfamily LCH17_14335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_14335 PF03466 LysR substrate binding domain LCH17_14340 PF00155 Aminotransferase class I and II LCH17_14345 PF02583 Metal-sensitive transcriptional repressor LCH17_14360 PF17967 Pullulanase N2 domain LCH17_14360 PF03714 Bacterial pullanase-associated domain LCH17_14360 PF11852 Domain of unknown function (DUF3372) LCH17_14360 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LCH17_14360 PF18494 Pullulanase Ins domain LCH17_14365 PF00403 Heavy-metal-associated domain LCH17_14370 PF08534 Redoxin LCH17_14380 PF00271 Helicase conserved C-terminal domain LCH17_14380 PF00270 DEAD/DEAH box helicase LCH17_14395 PF03372 Endonuclease/Exonuclease/phosphatase family LCH17_14400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_14400 PF08447 PAS fold LCH17_14415 PF06062 Uncharacterised protein family (UPF0231) LCH17_14425 PF05651 Putative sugar diacid recognition LCH17_14425 PF13556 PucR C-terminal helix-turn-helix domain LCH17_14425 PF17853 GGDEF-like domain LCH17_14430 PF02447 GntP family permease LCH17_14435 PF02595 Glycerate kinase family LCH17_14445 PF00255 Glutathione peroxidase LCH17_14450 PF03466 LysR substrate binding domain LCH17_14450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_14455 PF01773 Na+ dependent nucleoside transporter N-terminus LCH17_14455 PF07670 Nucleoside recognition LCH17_14455 PF07662 Na+ dependent nucleoside transporter C-terminus LCH17_14460 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LCH17_14460 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LCH17_14465 PF00472 RF-1 domain LCH17_14470 PF00543 Nitrogen regulatory protein P-II LCH17_14480 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_14485 PF00005 ABC transporter LCH17_14485 PF08402 TOBE domain LCH17_14490 PF04261 Dyp-type peroxidase family LCH17_14495 PF01316 Arginine repressor, DNA binding domain LCH17_14495 PF02863 Arginine repressor, C-terminal domain LCH17_14500 PF00005 ABC transporter LCH17_14505 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH17_14510 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_14515 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_14520 PF00056 lactate/malate dehydrogenase, NAD binding domain LCH17_14520 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LCH17_14525 PF08238 Sel1 repeat LCH17_14530 PF00970 Oxidoreductase FAD-binding domain LCH17_14530 PF00042 Globin LCH17_14530 PF00175 Oxidoreductase NAD-binding domain LCH17_14535 PF02082 Transcriptional regulator LCH17_14540 PF03471 Transporter associated domain LCH17_14540 PF01595 Cyclin M transmembrane N-terminal domain LCH17_14540 PF00571 CBS domain LCH17_14545 PF01578 Cytochrome C assembly protein LCH17_14550 PF00448 SRP54-type protein, GTPase domain LCH17_14550 PF02978 Signal peptide binding domain LCH17_14550 PF02881 SRP54-type protein, helical bundle domain LCH17_14555 PF00886 Ribosomal protein S16 LCH17_14560 PF01782 RimM N-terminal domain LCH17_14560 PF05239 PRC-barrel domain LCH17_14565 PF01746 tRNA (Guanine-1)-methyltransferase LCH17_14570 PF01245 Ribosomal protein L19 LCH17_14580 PF02976 DNA mismatch repair enzyme MutH LCH17_14585 PF00293 NUDIX domain LCH17_14590 PF05524 PEP-utilising enzyme, N-terminal LCH17_14590 PF01590 GAF domain LCH17_14590 PF02896 PEP-utilising enzyme, TIM barrel domain LCH17_14590 PF00391 PEP-utilising enzyme, mobile domain LCH17_14595 PF01790 Prolipoprotein diacylglyceryl transferase LCH17_14600 PF00303 Thymidylate synthase LCH17_14605 PF06965 Na+/H+ antiporter 1 LCH17_14615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_14615 PF03466 LysR substrate binding domain LCH17_14620 PF01022 Bacterial regulatory protein, arsR family LCH17_14625 PF01649 Ribosomal protein S20 LCH17_14630 PF03023 Lipid II flippase MurJ LCH17_14640 PF01687 Riboflavin kinase LCH17_14640 PF06574 FAD synthetase LCH17_14645 PF06827 Zinc finger found in FPG and IleRS LCH17_14645 PF00133 tRNA synthetases class I (I, L, M and V) LCH17_14645 PF08264 Anticodon-binding domain of tRNA LCH17_14650 PF01252 Signal peptidase (SPase) II LCH17_14655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCH17_14660 PF02401 LytB protein LCH17_14665 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor LCH17_14665 PF07963 Prokaryotic N-terminal methylation motif LCH17_14700 PF02540 NAD synthase LCH17_14700 PF00795 Carbon-nitrogen hydrolase LCH17_14705 PF00543 Nitrogen regulatory protein P-II LCH17_14715 PF02664 S-Ribosylhomocysteinase (LuxS) LCH17_14720 PF00990 Diguanylate cyclase, GGDEF domain LCH17_14725 PF17876 Cold shock domain LCH17_14725 PF08461 Ribonuclease R winged-helix domain LCH17_14725 PF08206 Ribonuclease B OB domain LCH17_14725 PF00773 RNB domain LCH17_14725 PF00575 S1 RNA binding domain LCH17_14730 PF00588 SpoU rRNA Methylase family LCH17_14730 PF08032 RNA 2'-O ribose methyltransferase substrate binding LCH17_14740 PF13673 Acetyltransferase (GNAT) domain LCH17_14755 PF01411 tRNA synthetases class II (A) LCH17_14755 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LCH17_14755 PF02272 DHHA1 domain LCH17_14760 PF01566 Natural resistance-associated macrophage protein LCH17_14765 PF01250 Ribosomal protein S6 LCH17_14770 PF01084 Ribosomal protein S18 LCH17_14775 PF03948 Ribosomal protein L9, C-terminal domain LCH17_14775 PF01281 Ribosomal protein L9, N-terminal domain LCH17_14780 PF00970 Oxidoreductase FAD-binding domain LCH17_14780 PF00175 Oxidoreductase NAD-binding domain LCH17_14800 PF16197 Ketoacyl-synthetase C-terminal extension LCH17_14800 PF08659 KR domain LCH17_14800 PF02801 Beta-ketoacyl synthase, C-terminal domain LCH17_14800 PF08990 Erythronolide synthase docking LCH17_14800 PF00109 Beta-ketoacyl synthase, N-terminal domain LCH17_14800 PF00698 Acyl transferase domain LCH17_14800 PF00550 Phosphopantetheine attachment site LCH17_14800 PF08240 Alcohol dehydrogenase GroES-like domain LCH17_14800 PF14765 Polyketide synthase dehydratase LCH17_14805 PF09335 SNARE associated Golgi protein LCH17_14810 PF00675 Insulinase (Peptidase family M16) LCH17_14810 PF05193 Peptidase M16 inactive domain LCH17_14815 PF04262 Glutamate-cysteine ligase LCH17_14820 PF00501 AMP-binding enzyme LCH17_14830 PF00583 Acetyltransferase (GNAT) family LCH17_14840 PF12592 Protein of unknown function (DUF3763) LCH17_14840 PF17868 AAA lid domain LCH17_14840 PF07728 AAA domain (dynein-related subfamily) LCH17_14845 PF05762 VWA domain containing CoxE-like protein LCH17_14850 PF13188 PAS domain LCH17_14850 PF03707 Bacterial signalling protein N terminal repeat LCH17_14850 PF00990 Diguanylate cyclase, GGDEF domain LCH17_14850 PF00563 EAL domain LCH17_14855 PF00072 Response regulator receiver domain LCH17_14855 PF00990 Diguanylate cyclase, GGDEF domain LCH17_14860 PF00009 Elongation factor Tu GTP binding domain LCH17_14860 PF03144 Elongation factor Tu domain 2 LCH17_14860 PF16658 Class II release factor RF3, C-terminal domain LCH17_14880 PF00583 Acetyltransferase (GNAT) family LCH17_14885 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LCH17_14895 PF04480 Protein of unknown function (DUF559) LCH17_14900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_14900 PF03466 LysR substrate binding domain LCH17_14905 PF04371 Porphyromonas-type peptidyl-arginine deiminase LCH17_14910 PF01425 Amidase LCH17_14915 PF13614 AAA domain LCH17_14920 PF00753 Metallo-beta-lactamase superfamily LCH17_14930 PF00270 DEAD/DEAH box helicase LCH17_14930 PF00271 Helicase conserved C-terminal domain LCH17_14935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_14935 PF03466 LysR substrate binding domain LCH17_14950 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase LCH17_14955 PF03150 Di-haem cytochrome c peroxidase LCH17_14955 PF00034 Cytochrome c LCH17_14970 PF00445 Ribonuclease T2 family LCH17_14980 PF03060 Nitronate monooxygenase LCH17_15015 PF00293 NUDIX domain LCH17_15015 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LCH17_15015 PF09297 NADH pyrophosphatase zinc ribbon domain LCH17_15020 PF00672 HAMP domain LCH17_15020 PF16527 Two-component sensor protein CpxA, periplasmic domain LCH17_15020 PF00512 His Kinase A (phospho-acceptor) domain LCH17_15020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_15025 PF00072 Response regulator receiver domain LCH17_15025 PF00486 Transcriptional regulatory protein, C terminal LCH17_15030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCH17_15035 PF12704 MacB-like periplasmic core domain LCH17_15035 PF00005 ABC transporter LCH17_15035 PF02687 FtsX-like permease family LCH17_15040 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH17_15045 PF00005 ABC transporter LCH17_15050 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_15055 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_15060 PF00291 Pyridoxal-phosphate dependent enzyme LCH17_15065 PF00326 Prolyl oligopeptidase family LCH17_15065 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LCH17_15085 PF03710 Glutamate-ammonia ligase adenylyltransferase LCH17_15085 PF08335 GlnD PII-uridylyltransferase LCH17_15095 PF02743 Cache domain LCH17_15095 PF00672 HAMP domain LCH17_15095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_15100 PF00027 Cyclic nucleotide-binding domain LCH17_15100 PF00520 Ion transport protein LCH17_15105 PF08239 Bacterial SH3 domain LCH17_15110 PF00171 Aldehyde dehydrogenase family LCH17_15110 PF01619 Proline dehydrogenase LCH17_15110 PF14850 DNA-binding domain of Proline dehydrogenase LCH17_15110 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LCH17_15115 PF09297 NADH pyrophosphatase zinc ribbon domain LCH17_15115 PF00293 NUDIX domain LCH17_15120 PF01208 Uroporphyrinogen decarboxylase (URO-D) LCH17_15125 PF00480 ROK family LCH17_15130 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LCH17_15130 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LCH17_15135 PF00162 Phosphoglycerate kinase LCH17_15140 PF01116 Fructose-bisphosphate aldolase class-II LCH17_15145 PF01266 FAD dependent oxidoreductase LCH17_15155 PF11412 Disulphide bond corrector protein DsbC LCH17_15155 PF02683 Cytochrome C biogenesis protein transmembrane region LCH17_15160 PF03091 CutA1 divalent ion tolerance protein LCH17_15175 PF03466 LysR substrate binding domain LCH17_15175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_15180 PF01571 Aminomethyltransferase folate-binding domain LCH17_15185 PF03937 Flavinator of succinate dehydrogenase LCH17_15195 PF00890 FAD binding domain LCH17_15195 PF02910 Fumarate reductase flavoprotein C-term LCH17_15200 PF08281 Sigma-70, region 4 LCH17_15200 PF04542 Sigma-70 region 2 LCH17_15205 PF03873 Anti sigma-E protein RseA, C-terminal domain LCH17_15205 PF03872 Anti sigma-E protein RseA, N-terminal domain LCH17_15210 PF03888 MucB/RseB N-terminal domain LCH17_15210 PF17188 MucB/RseB C-terminal domain LCH17_15220 PF03144 Elongation factor Tu domain 2 LCH17_15220 PF00679 Elongation factor G C-terminus LCH17_15220 PF06421 GTP-binding protein LepA C-terminus LCH17_15220 PF00009 Elongation factor Tu GTP binding domain LCH17_15225 PF10502 Signal peptidase, peptidase S26 LCH17_15230 PF00035 Double-stranded RNA binding motif LCH17_15230 PF14622 Ribonuclease-III-like LCH17_15235 PF07650 KH domain LCH17_15235 PF01926 50S ribosome-binding GTPase LCH17_15240 PF02565 Recombination protein O C terminal LCH17_15240 PF11967 Recombination protein O N terminal LCH17_15245 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LCH17_15255 PF01116 Fructose-bisphosphate aldolase class-II LCH17_15260 PF01979 Amidohydrolase family LCH17_15265 PF03610 PTS system fructose IIA component LCH17_15270 PF03613 PTS system mannose/fructose/sorbose family IID component LCH17_15275 PF03609 PTS system sorbose-specific iic component LCH17_15280 PF03830 PTS system sorbose subfamily IIB component LCH17_15285 PF01380 SIS domain LCH17_15290 PF08013 Tagatose 6 phosphate kinase LCH17_15295 PF08220 DeoR-like helix-turn-helix domain LCH17_15295 PF00455 DeoR C terminal sensor domain LCH17_15300 PF01510 N-acetylmuramoyl-L-alanine amidase LCH17_15305 PF07308 Protein of unknown function (DUF1456) LCH17_15310 PF00672 HAMP domain LCH17_15310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_15310 PF00072 Response regulator receiver domain LCH17_15310 PF01627 Hpt domain LCH17_15310 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LCH17_15310 PF00512 His Kinase A (phospho-acceptor) domain LCH17_15315 PF01938 TRAM domain LCH17_15315 PF05958 tRNA (Uracil-5-)-methyltransferase LCH17_15320 PF13291 ACT domain LCH17_15320 PF04607 Region found in RelA / SpoT proteins LCH17_15320 PF02824 TGS domain LCH17_15325 PF03819 MazG nucleotide pyrophosphohydrolase domain LCH17_15330 PF00117 Glutamine amidotransferase class-I LCH17_15330 PF06418 CTP synthase N-terminus LCH17_15335 PF00113 Enolase, C-terminal TIM barrel domain LCH17_15335 PF03952 Enolase, N-terminal domain LCH17_15340 PF04977 Septum formation initiator LCH17_15345 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LCH17_15350 PF02542 YgbB family LCH17_15355 PF01142 tRNA pseudouridine synthase D (TruD) LCH17_15360 PF01975 Survival protein SurE LCH17_15370 PF09335 SNARE associated Golgi protein LCH17_15375 PF01476 LysM domain LCH17_15375 PF01551 Peptidase family M23 LCH17_15380 PF04542 Sigma-70 region 2 LCH17_15380 PF00140 Sigma-70 factor, region 1.2 LCH17_15380 PF04539 Sigma-70 region 3 LCH17_15380 PF04545 Sigma-70, region 4 LCH17_15385 PF00814 Glycoprotease family LCH17_15390 PF01165 Ribosomal protein S21 LCH17_15395 PF09424 Yqey-like protein LCH17_15400 PF01807 CHC2 zinc finger LCH17_15400 PF08278 DNA primase DnaG DnaB-binding LCH17_15400 PF08275 DNA primase catalytic core, N-terminal domain LCH17_15400 PF10410 DnaB-helicase binding domain of primase LCH17_15405 PF04542 Sigma-70 region 2 LCH17_15405 PF04545 Sigma-70, region 4 LCH17_15405 PF04546 Sigma-70, non-essential region LCH17_15405 PF03979 Sigma-70 factor, region 1.1 LCH17_15405 PF00140 Sigma-70 factor, region 1.2 LCH17_15405 PF04539 Sigma-70 region 3 LCH17_15415 PF00128 Alpha amylase, catalytic domain LCH17_15430 PF02844 Phosphoribosylglycinamide synthetase, N domain LCH17_15430 PF02843 Phosphoribosylglycinamide synthetase, C domain LCH17_15430 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LCH17_15435 PF01808 AICARFT/IMPCHase bienzyme LCH17_15435 PF02142 MGS-like domain LCH17_15440 PF13411 MerR HTH family regulatory protein LCH17_15450 PF03889 Alternative ribosome-rescue factor A LCH17_15455 PF06969 HemN C-terminal domain LCH17_15455 PF04055 Radical SAM superfamily LCH17_15460 PF01725 Ham1 family LCH17_15465 PF07690 Major Facilitator Superfamily LCH17_15470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LCH17_15470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LCH17_15480 PF13302 Acetyltransferase (GNAT) domain LCH17_15485 PF13302 Acetyltransferase (GNAT) domain LCH17_15490 PF04151 Bacterial pre-peptidase C-terminal domain LCH17_15490 PF02868 Thermolysin metallopeptidase, alpha-helical domain LCH17_15490 PF01447 Thermolysin metallopeptidase, catalytic domain LCH17_15490 PF03413 Peptidase propeptide and YPEB domain LCH17_15490 PF07504 Fungalysin/Thermolysin Propeptide Motif LCH17_15495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_15495 PF03466 LysR substrate binding domain LCH17_15500 PF07690 Major Facilitator Superfamily LCH17_15505 PF00267 Gram-negative porin LCH17_15510 PF03605 Anaerobic c4-dicarboxylate membrane transporter LCH17_15515 PF00206 Lyase LCH17_15515 PF10415 Fumarase C C-terminus LCH17_15520 PF04186 FxsA cytoplasmic membrane protein LCH17_15525 PF01554 MatE LCH17_15530 PF00166 Chaperonin 10 Kd subunit LCH17_15535 PF00118 TCP-1/cpn60 chaperonin family LCH17_15545 PF00990 Diguanylate cyclase, GGDEF domain LCH17_15545 PF00563 EAL domain LCH17_15545 PF13188 PAS domain LCH17_15545 PF03707 Bacterial signalling protein N terminal repeat LCH17_15555 PF00849 RNA pseudouridylate synthase LCH17_15560 PF18337 RapA N-terminal Tudor like domain LCH17_15560 PF18339 RapA N-terminal Tudor like domain 1 LCH17_15560 PF12137 RNA polymerase recycling family C-terminal LCH17_15560 PF00176 SNF2 family N-terminal domain LCH17_15560 PF00271 Helicase conserved C-terminal domain LCH17_15590 PF02867 Ribonucleotide reductase, barrel domain LCH17_15590 PF00317 Ribonucleotide reductase, all-alpha domain LCH17_15590 PF08343 Ribonucleotide reductase N-terminal LCH17_15600 PF13638 PIN domain LCH17_15600 PF02562 PhoH-like protein LCH17_15610 PF00005 ABC transporter LCH17_15615 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_15635 PF00694 Aconitase C-terminal domain LCH17_15640 PF00330 Aconitase family (aconitate hydratase) LCH17_15645 PF00180 Isocitrate/isopropylmalate dehydrogenase LCH17_15650 PF00682 HMGL-like LCH17_15650 PF08502 LeuA allosteric (dimerisation) domain LCH17_15660 PF01569 PAP2 superfamily LCH17_15665 PF04101 Glycosyltransferase family 28 C-terminal domain LCH17_15665 PF03033 Glycosyltransferase family 28 N-terminal domain LCH17_15675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LCH17_15675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LCH17_15675 PF00205 Thiamine pyrophosphate enzyme, central domain LCH17_15680 PF10369 Small subunit of acetolactate synthase LCH17_15685 PF07085 DRTGG domain LCH17_15685 PF01515 Phosphate acetyl/butaryl transferase LCH17_15690 PF00871 Acetokinase family LCH17_15695 PF04217 Protein of unknown function, DUF412 LCH17_15700 PF03887 YfbU domain LCH17_15705 PF00578 AhpC/TSA family LCH17_15710 PF01842 ACT domain LCH17_15715 PF00701 Dihydrodipicolinate synthetase family LCH17_15720 PF06804 NlpB/DapX lipoprotein LCH17_15725 PF01259 SAICAR synthetase LCH17_15735 PF03466 LysR substrate binding domain LCH17_15735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_15740 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LCH17_15760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_15760 PF00512 His Kinase A (phospho-acceptor) domain LCH17_15760 PF18415 Histidine kinase receptor ArcB trans-membrane domain LCH17_15760 PF01627 Hpt domain LCH17_15760 PF00072 Response regulator receiver domain LCH17_15760 PF00989 PAS fold LCH17_15765 PF13286 Phosphohydrolase-associated domain LCH17_15765 PF01966 HD domain LCH17_15775 PF00072 Response regulator receiver domain LCH17_15775 PF09456 RcsC Alpha-Beta-Loop (ABL) LCH17_15775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_15775 PF00512 His Kinase A (phospho-acceptor) domain LCH17_15780 PF00990 Diguanylate cyclase, GGDEF domain LCH17_15780 PF00563 EAL domain LCH17_15780 PF03707 Bacterial signalling protein N terminal repeat LCH17_15785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_15785 PF00672 HAMP domain LCH17_15785 PF12729 Four helix bundle sensory module for signal transduction LCH17_15790 PF02357 Transcription termination factor nusG LCH17_15795 PF03180 NLPA lipoprotein LCH17_15800 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_15805 PF00005 ABC transporter LCH17_15805 PF09383 NIL domain LCH17_15815 PF00480 ROK family LCH17_15820 PF08331 Domain of unknown function (DUF1730) LCH17_15825 PF03853 YjeF-related protein N-terminus LCH17_15825 PF01256 Carbohydrate kinase LCH17_15830 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LCH17_15835 PF01520 N-acetylmuramoyl-L-alanine amidase LCH17_15840 PF01119 DNA mismatch repair protein, C-terminal domain LCH17_15840 PF08676 MutL C terminal dimerisation domain LCH17_15850 PF17209 Hfq protein LCH17_15855 PF01926 50S ribosome-binding GTPase LCH17_15855 PF13167 GTP-binding GTPase N-terminal LCH17_15855 PF16360 GTP-binding GTPase Middle Region LCH17_15860 PF01145 SPFH domain / Band 7 family LCH17_15860 PF12221 Bacterial membrane protein N terminal LCH17_15865 PF01145 SPFH domain / Band 7 family LCH17_15870 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) LCH17_15875 PF00348 Polyprenyl synthetase LCH17_15880 PF00829 Ribosomal prokaryotic L21 protein LCH17_15885 PF01016 Ribosomal L27 protein LCH17_15890 PF01926 50S ribosome-binding GTPase LCH17_15890 PF01018 GTP1/OBG LCH17_15895 PF07670 Nucleoside recognition LCH17_15900 PF13193 AMP-binding enzyme C-terminal domain LCH17_15900 PF00501 AMP-binding enzyme LCH17_15920 PF00296 Luciferase-like monooxygenase LCH17_15930 PF00149 Calcineurin-like phosphoesterase LCH17_15935 PF04379 ApaG domain LCH17_15940 PF00398 Ribosomal RNA adenine dimethylase LCH17_15945 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LCH17_15950 PF00639 PPIC-type PPIASE domain LCH17_15950 PF09312 SurA N-terminal domain LCH17_15955 PF04453 LPS transport system D LCH17_15955 PF03968 OstA-like protein LCH17_15960 PF01636 Phosphotransferase enzyme family LCH17_15965 PF00483 Nucleotidyl transferase LCH17_15970 PF00226 DnaJ domain LCH17_15970 PF05099 Tellurite resistance protein TerB LCH17_15975 PF00860 Permease family LCH17_15985 PF12848 ABC transporter LCH17_15985 PF00005 ABC transporter LCH17_16000 PF01048 Phosphorylase superfamily LCH17_16005 PF01464 Transglycosylase SLT domain LCH17_16020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_16020 PF03466 LysR substrate binding domain LCH17_16025 PF01048 Phosphorylase superfamily LCH17_16030 PF01773 Na+ dependent nucleoside transporter N-terminus LCH17_16030 PF07662 Na+ dependent nucleoside transporter C-terminus LCH17_16030 PF07670 Nucleoside recognition LCH17_16035 PF01791 DeoC/LacD family aldolase LCH17_16045 PF01370 NAD dependent epimerase/dehydratase family LCH17_16055 PF00005 ABC transporter LCH17_16060 PF01032 FecCD transport family LCH17_16070 PF06228 Haem utilisation ChuX/HutX LCH17_16075 PF01243 Pyridoxamine 5'-phosphate oxidase LCH17_16095 PF07715 TonB-dependent Receptor Plug Domain LCH17_16095 PF00593 TonB dependent receptor LCH17_16100 PF12832 MFS_1 like family LCH17_16105 PF13443 Cro/C1-type HTH DNA-binding domain LCH17_16115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_16115 PF00989 PAS fold LCH17_16115 PF00512 His Kinase A (phospho-acceptor) domain LCH17_16120 PF08329 Chitinase A, N-terminal domain LCH17_16120 PF00704 Glycosyl hydrolases family 18 LCH17_16125 PF17945 Beta/Gamma crystallin LCH17_16125 PF12561 ToxR activated gene A lipoprotein domain LCH17_16130 PF18416 N-acetylglucosamine binding protein domain 2 LCH17_16130 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LCH17_16135 PF13847 Methyltransferase domain LCH17_16140 PF00027 Cyclic nucleotide-binding domain LCH17_16140 PF13545 Crp-like helix-turn-helix domain LCH17_16145 PF02566 OsmC-like protein LCH17_16160 PF00485 Phosphoribulokinase / Uridine kinase family LCH17_16165 PF00893 Small Multidrug Resistance protein LCH17_16170 PF00892 EamA-like transporter family LCH17_16175 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LCH17_16180 PF01522 Polysaccharide deacetylase LCH17_16185 PF01370 NAD dependent epimerase/dehydratase family LCH17_16185 PF02911 Formyl transferase, C-terminal domain LCH17_16185 PF00551 Formyl transferase LCH17_16190 PF00535 Glycosyl transferase family 2 LCH17_16195 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LCH17_16200 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LCH17_16200 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LCH17_16200 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LCH17_16205 PF06794 Uncharacterised protein family (UPF0270) LCH17_16210 PF00360 Phytochrome region LCH17_16210 PF01590 GAF domain LCH17_16210 PF00563 EAL domain LCH17_16210 PF00990 Diguanylate cyclase, GGDEF domain LCH17_16215 PF00561 alpha/beta hydrolase fold LCH17_16220 PF01584 CheW-like domain LCH17_16220 PF00072 Response regulator receiver domain LCH17_16230 PF09526 Probable metal-binding protein (DUF2387) LCH17_16235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCH17_16240 PF04102 SlyX LCH17_16250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCH17_16250 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LCH17_16255 PF02954 Bacterial regulatory protein, Fis family LCH17_16255 PF00072 Response regulator receiver domain LCH17_16255 PF00158 Sigma-54 interaction domain LCH17_16275 PF02872 5'-nucleotidase, C-terminal domain LCH17_16275 PF00149 Calcineurin-like phosphoesterase LCH17_16280 PF00563 EAL domain LCH17_16280 PF12792 CSS motif domain associated with EAL LCH17_16290 PF00772 DnaB-like helicase N terminal domain LCH17_16290 PF03796 DnaB-like helicase C terminal domain LCH17_16295 PF01168 Alanine racemase, N-terminal domain LCH17_16295 PF00842 Alanine racemase, C-terminal domain LCH17_16300 PF12838 4Fe-4S dicluster domain LCH17_16305 PF16325 Peptidase family U32 C-terminal domain LCH17_16305 PF01136 Peptidase family U32 LCH17_16325 PF00816 H-NS histone family LCH17_16335 PF09722 Protein of unknown function (DUF2384) LCH17_16345 PF02321 Outer membrane efflux protein LCH17_16350 PF00873 AcrB/AcrD/AcrF family LCH17_16360 PF00665 Integrase core domain LCH17_16365 PF01695 IstB-like ATP binding protein LCH17_16380 PF00072 Response regulator receiver domain LCH17_16380 PF00486 Transcriptional regulatory protein, C terminal LCH17_16385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_16385 PF00512 His Kinase A (phospho-acceptor) domain LCH17_16385 PF00672 HAMP domain LCH17_16415 PF05275 Copper resistance protein B precursor (CopB) LCH17_16420 PF07732 Multicopper oxidase LCH17_16420 PF00394 Multicopper oxidase LCH17_16420 PF07731 Multicopper oxidase LCH17_16455 PF04542 Sigma-70 region 2 LCH17_16455 PF08281 Sigma-70, region 4 LCH17_16460 PF03960 ArsC family LCH17_16465 PF01758 Sodium Bile acid symporter family LCH17_16475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LCH17_16475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LCH17_16485 PF01451 Low molecular weight phosphotyrosine protein phosphatase LCH17_16490 PF02374 Anion-transporting ATPase LCH17_16495 PF06953 Arsenical resistance operon trans-acting repressor ArsD LCH17_16500 PF01451 Low molecular weight phosphotyrosine protein phosphatase LCH17_16505 PF01022 Bacterial regulatory protein, arsR family LCH17_16525 PF13247 4Fe-4S dicluster domain LCH17_16525 PF00037 4Fe-4S binding domain LCH17_16530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LCH17_16530 PF00384 Molybdopterin oxidoreductase LCH17_16530 PF01568 Molydopterin dinucleotide binding domain LCH17_16580 PF01037 Lrp/AsnC ligand binding domain LCH17_16590 PF00665 Integrase core domain LCH17_16595 PF01695 IstB-like ATP binding protein LCH17_16600 PF00701 Dihydrodipicolinate synthetase family LCH17_16605 PF00155 Aminotransferase class I and II LCH17_16605 PF00392 Bacterial regulatory proteins, gntR family LCH17_16615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCH17_16620 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_16625 PF12911 N-terminal TM domain of oligopeptide transport permease C LCH17_16625 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_16630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCH17_16630 PF00005 ABC transporter LCH17_16680 PF00563 EAL domain LCH17_16680 PF01590 GAF domain LCH17_16680 PF00990 Diguanylate cyclase, GGDEF domain LCH17_16680 PF00989 PAS fold LCH17_16695 PF15976 CS1-pili formation C-terminal LCH17_16695 PF16967 E-set like domain LCH17_16705 PF00196 Bacterial regulatory proteins, luxR family LCH17_16705 PF00072 Response regulator receiver domain LCH17_16710 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LCH17_16710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_16710 PF00512 His Kinase A (phospho-acceptor) domain LCH17_16710 PF01627 Hpt domain LCH17_16710 PF00072 Response regulator receiver domain LCH17_16710 PF00672 HAMP domain LCH17_16735 PF00266 Aminotransferase class-V LCH17_16740 PF00072 Response regulator receiver domain LCH17_16740 PF01339 CheB methylesterase LCH17_16745 PF03975 CheD chemotactic sensory transduction LCH17_16750 PF01739 CheR methyltransferase, SAM binding domain LCH17_16750 PF03705 CheR methyltransferase, all-alpha domain LCH17_16755 PF00672 HAMP domain LCH17_16755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_16755 PF02203 Tar ligand binding domain homologue LCH17_16760 PF01584 CheW-like domain LCH17_16765 PF12729 Four helix bundle sensory module for signal transduction LCH17_16765 PF00672 HAMP domain LCH17_16765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_16770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_16770 PF01627 Hpt domain LCH17_16770 PF07194 P2 response regulator binding domain LCH17_16770 PF01584 CheW-like domain LCH17_16770 PF02895 Signal transducing histidine kinase, homodimeric domain LCH17_16780 PF00072 Response regulator receiver domain LCH17_16785 PF02743 Cache domain LCH17_16785 PF00672 HAMP domain LCH17_16785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_16790 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LCH17_16790 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LCH17_16795 PF03466 LysR substrate binding domain LCH17_16795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_16800 PF01810 LysE type translocator LCH17_16805 PF01136 Peptidase family U32 LCH17_16805 PF12392 Collagenase LCH17_16820 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LCH17_16820 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LCH17_16825 PF02805 Metal binding domain of Ada LCH17_16825 PF00730 HhH-GPD superfamily base excision DNA repair protein LCH17_16825 PF06029 AlkA N-terminal domain LCH17_16825 PF12833 Helix-turn-helix domain LCH17_16835 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LCH17_16860 PF00106 short chain dehydrogenase LCH17_16865 PF03573 outer membrane porin, OprD family LCH17_16870 PF02743 Cache domain LCH17_16870 PF00672 HAMP domain LCH17_16870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_16935 PF00486 Transcriptional regulatory protein, C terminal LCH17_16965 PF01817 Chorismate mutase type II LCH17_16965 PF00800 Prephenate dehydratase LCH17_16995 PF08349 Protein of unknown function (DUF1722) LCH17_17000 PF13411 MerR HTH family regulatory protein LCH17_17005 PF03441 FAD binding domain of DNA photolyase LCH17_17005 PF00875 DNA photolyase LCH17_17015 PF00106 short chain dehydrogenase LCH17_17055 PF00210 Ferritin-like domain LCH17_17060 PF03063 Prismane/CO dehydrogenase family LCH17_17065 PF00042 Globin LCH17_17065 PF00970 Oxidoreductase FAD-binding domain LCH17_17065 PF00175 Oxidoreductase NAD-binding domain LCH17_17070 PF16363 GDP-mannose 4,6 dehydratase LCH17_17075 PF13462 Thioredoxin LCH17_17075 PF06965 Na+/H+ antiporter 1 LCH17_17085 PF00196 Bacterial regulatory proteins, luxR family LCH17_17085 PF03472 Autoinducer binding domain LCH17_17090 PF05638 Type VI secretion system effector, Hcp LCH17_17100 PF04717 Type VI secretion system, phage-baseplate injector LCH17_17115 PF01695 IstB-like ATP binding protein LCH17_17120 PF00665 Integrase core domain LCH17_17145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_17145 PF03466 LysR substrate binding domain LCH17_17150 PF03306 Alpha-acetolactate decarboxylase LCH17_17155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LCH17_17155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LCH17_17155 PF00205 Thiamine pyrophosphate enzyme, central domain LCH17_17160 PF01965 DJ-1/PfpI family LCH17_17165 PF02558 Ketopantoate reductase PanE/ApbA LCH17_17165 PF08546 Ketopantoate reductase PanE/ApbA C terminal LCH17_17170 PF04461 Protein of unknown function (DUF520) LCH17_17175 PF03502 Nucleoside-specific channel-forming protein, Tsx LCH17_17180 PF07690 Major Facilitator Superfamily LCH17_17190 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LCH17_17200 PF05175 Methyltransferase small domain LCH17_17205 PF01722 BolA-like protein LCH17_17210 PF11973 NQRA C-terminal domain LCH17_17210 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) LCH17_17215 PF03116 NQR2, RnfD, RnfE family LCH17_17220 PF04205 FMN-binding domain LCH17_17225 PF02508 Rnf-Nqr subunit, membrane protein LCH17_17230 PF02508 Rnf-Nqr subunit, membrane protein LCH17_17235 PF00970 Oxidoreductase FAD-binding domain LCH17_17235 PF00111 2Fe-2S iron-sulfur cluster binding domain LCH17_17235 PF00175 Oxidoreductase NAD-binding domain LCH17_17240 PF02424 ApbE family LCH17_17255 PF11799 impB/mucB/samB family C-terminal domain LCH17_17255 PF11798 IMS family HHH motif LCH17_17255 PF00817 impB/mucB/samB family LCH17_17260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_17260 PF00672 HAMP domain LCH17_17265 PF03466 LysR substrate binding domain LCH17_17265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_17275 PF04241 Protein of unknown function (DUF423) LCH17_17280 PF01728 FtsJ-like methyltransferase LCH17_17280 PF18125 RlmM ferredoxin-like domain LCH17_17290 PF00180 Isocitrate/isopropylmalate dehydrogenase LCH17_17290 PF18324 Hypothetical protein TT1725 LCH17_17295 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LCH17_17295 PF01367 5'-3' exonuclease, C-terminal SAM fold LCH17_17300 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LCH17_17300 PF11892 Domain of unknown function (DUF3412) LCH17_17300 PF03641 Possible lysine decarboxylase LCH17_17305 PF00990 Diguanylate cyclase, GGDEF domain LCH17_17315 PF14489 QueF-like protein LCH17_17315 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LCH17_17320 PF07348 Syd protein (SUKH-2) LCH17_17325 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) LCH17_17350 PF04287 tRNA pseudouridine synthase C LCH17_17355 PF00849 RNA pseudouridylate synthase LCH17_17360 PF00258 Flavodoxin LCH17_17365 PF02264 LamB porin LCH17_17370 PF07148 Maltose operon periplasmic protein precursor (MalM) LCH17_17375 PF02378 Phosphotransferase system, EIIC LCH17_17375 PF00367 phosphotransferase system, EIIB LCH17_17380 PF11944 Protein of unknown function (DUF3461) LCH17_17385 PF00132 Bacterial transferase hexapeptide (six repeats) LCH17_17385 PF14602 Hexapeptide repeat of succinyl-transferase LCH17_17385 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LCH17_17390 PF01966 HD domain LCH17_17390 PF01909 Nucleotidyltransferase domain LCH17_17390 PF08335 GlnD PII-uridylyltransferase LCH17_17390 PF01842 ACT domain LCH17_17395 PF00557 Metallopeptidase family M24 LCH17_17400 PF00318 Ribosomal protein S2 LCH17_17405 PF00889 Elongation factor TS LCH17_17410 PF00696 Amino acid kinase family LCH17_17415 PF01765 Ribosome recycling factor LCH17_17420 PF01255 Putative undecaprenyl diphosphate synthase LCH17_17430 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LCH17_17430 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LCH17_17430 PF13288 DXP reductoisomerase C-terminal domain LCH17_17435 PF17820 PDZ domain LCH17_17435 PF02163 Peptidase family M50 LCH17_17440 PF01103 Surface antigen LCH17_17440 PF07244 Surface antigen variable number repeat LCH17_17445 PF03938 Outer membrane protein (OmpH-like) LCH17_17450 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LCH17_17450 PF00132 Bacterial transferase hexapeptide (six repeats) LCH17_17455 PF07977 FabA-like domain LCH17_17460 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LCH17_17460 PF00132 Bacterial transferase hexapeptide (six repeats) LCH17_17465 PF02684 Lipid-A-disaccharide synthetase LCH17_17470 PF01351 Ribonuclease HII LCH17_17475 PF07733 Bacterial DNA polymerase III alpha NTPase domain LCH17_17475 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LCH17_17475 PF14579 Helix-hairpin-helix motif LCH17_17475 PF02811 PHP domain LCH17_17475 PF01336 OB-fold nucleic acid binding domain LCH17_17480 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LCH17_17485 PF18500 CadC C-terminal domain 1 LCH17_17485 PF00486 Transcriptional regulatory protein, C terminal LCH17_17490 PF13520 Amino acid permease LCH17_17495 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LCH17_17495 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LCH17_17495 PF01276 Orn/Lys/Arg decarboxylase, major domain LCH17_17500 PF08543 Phosphomethylpyrimidine kinase LCH17_17510 PF03466 LysR substrate binding domain LCH17_17510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_17520 PF12706 Beta-lactamase superfamily domain LCH17_17525 PF03466 LysR substrate binding domain LCH17_17525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_17530 PF12146 Serine aminopeptidase, S33 LCH17_17535 PF12146 Serine aminopeptidase, S33 LCH17_17540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_17540 PF03466 LysR substrate binding domain LCH17_17545 PF13520 Amino acid permease LCH17_17550 PF13302 Acetyltransferase (GNAT) domain LCH17_17555 PF12848 ABC transporter LCH17_17555 PF16326 ABC transporter C-terminal domain LCH17_17555 PF00005 ABC transporter LCH17_17565 PF01431 Peptidase family M13 LCH17_17565 PF05649 Peptidase family M13 LCH17_17570 PF01171 PP-loop family LCH17_17570 PF09179 TilS substrate binding domain LCH17_17570 PF11734 TilS substrate C-terminal domain LCH17_17575 PF00990 Diguanylate cyclase, GGDEF domain LCH17_17580 PF02254 TrkA-N domain LCH17_17580 PF02080 TrkA-C domain LCH17_17580 PF00999 Sodium/hydrogen exchanger family LCH17_17600 PF00072 Response regulator receiver domain LCH17_17600 PF00196 Bacterial regulatory proteins, luxR family LCH17_17610 PF00128 Alpha amylase, catalytic domain LCH17_17625 PF00535 Glycosyl transferase family 2 LCH17_17640 PF01471 Putative peptidoglycan binding domain LCH17_17640 PF03734 L,D-transpeptidase catalytic domain LCH17_17645 PF05951 Bacterial protein of unknown function (DUF882) LCH17_17655 PF03458 UPF0126 domain LCH17_17665 PF06470 SMC proteins Flexible Hinge Domain LCH17_17665 PF02463 RecF/RecN/SMC N terminal domain LCH17_17670 PF04354 ZipA, C-terminal FtsZ-binding domain LCH17_17675 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LCH17_17675 PF03120 NAD-dependent DNA ligase OB-fold domain LCH17_17675 PF12826 Helix-hairpin-helix motif LCH17_17675 PF00533 BRCA1 C Terminus (BRCT) domain LCH17_17675 PF01653 NAD-dependent DNA ligase adenylation domain LCH17_17685 PF03477 ATP cone domain LCH17_17685 PF13597 Anaerobic ribonucleoside-triphosphate reductase LCH17_17695 PF01679 Proteolipid membrane potential modulator LCH17_17720 PF00529 HlyD membrane-fusion protein of T1SS LCH17_17720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCH17_17725 PF01047 MarR family LCH17_17735 PF03390 2-hydroxycarboxylate transporter family LCH17_17740 PF00390 Malic enzyme, N-terminal domain LCH17_17740 PF03949 Malic enzyme, NAD binding domain LCH17_17745 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LCH17_17745 PF17203 Single cache domain 3 LCH17_17745 PF00989 PAS fold LCH17_17745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_17750 PF12431 Transcriptional regulator LCH17_17750 PF00072 Response regulator receiver domain LCH17_17755 PF00892 EamA-like transporter family LCH17_17765 PF00171 Aldehyde dehydrogenase family LCH17_17770 PF01590 GAF domain LCH17_17770 PF02954 Bacterial regulatory protein, Fis family LCH17_17770 PF00158 Sigma-54 interaction domain LCH17_17775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCH17_17775 PF02770 Acyl-CoA dehydrogenase, middle domain LCH17_17775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCH17_17780 PF02515 CoA-transferase family III LCH17_17785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCH17_17790 PF00072 Response regulator receiver domain LCH17_17790 PF00486 Transcriptional regulatory protein, C terminal LCH17_17795 PF00512 His Kinase A (phospho-acceptor) domain LCH17_17795 PF00989 PAS fold LCH17_17795 PF11808 Phosphate regulon sensor protein PhoR LCH17_17795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_17800 PF12849 PBP superfamily domain LCH17_17805 PF01435 Peptidase family M48 LCH17_17815 PF00480 ROK family LCH17_17820 PF03932 CutC family LCH17_17825 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LCH17_17825 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCH17_17830 PF00005 ABC transporter LCH17_17850 PF00293 NUDIX domain LCH17_17860 PF08534 Redoxin LCH17_17865 PF01699 Sodium/calcium exchanger protein LCH17_17870 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LCH17_17870 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LCH17_17875 PF01235 Sodium:alanine symporter family LCH17_17885 PF00860 Permease family LCH17_17890 PF00072 Response regulator receiver domain LCH17_17890 PF00990 Diguanylate cyclase, GGDEF domain LCH17_17895 PF10692 Protein of unknown function (DUF2498) LCH17_17900 PF01554 MatE LCH17_17905 PF12833 Helix-turn-helix domain LCH17_17910 PF03949 Malic enzyme, NAD binding domain LCH17_17910 PF00390 Malic enzyme, N-terminal domain LCH17_17915 PF01389 OmpA-like transmembrane domain LCH17_17915 PF00691 OmpA family LCH17_17920 PF00691 OmpA family LCH17_17920 PF01389 OmpA-like transmembrane domain LCH17_17925 PF01389 OmpA-like transmembrane domain LCH17_17925 PF00691 OmpA family LCH17_17940 PF00209 Sodium:neurotransmitter symporter family LCH17_17945 PF01734 Patatin-like phospholipase LCH17_17950 PF00990 Diguanylate cyclase, GGDEF domain LCH17_17955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCH17_17955 PF00529 HlyD membrane-fusion protein of T1SS LCH17_17960 PF00873 AcrB/AcrD/AcrF family LCH17_17970 PF04055 Radical SAM superfamily LCH17_17970 PF08497 Radical SAM N-terminal LCH17_17970 PF11842 Domain of unknown function (DUF3362) LCH17_17985 PF12833 Helix-turn-helix domain LCH17_17990 PF05656 Protein of unknown function (DUF805) LCH17_18020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LCH17_18025 PF02075 Crossover junction endodeoxyribonuclease RuvC LCH17_18030 PF00230 Major intrinsic protein LCH17_18035 PF01464 Transglycosylase SLT domain LCH17_18035 PF10145 Phage-related minor tail protein LCH17_18035 PF01551 Peptidase family M23 LCH17_18040 PF00128 Alpha amylase, catalytic domain LCH17_18045 PF01551 Peptidase family M23 LCH17_18060 PF13091 PLD-like domain LCH17_18060 PF13396 Phospholipase_D-nuclease N-terminal LCH17_18070 PF00551 Formyl transferase LCH17_18070 PF01842 ACT domain LCH17_18075 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LCH17_18085 PF00085 Thioredoxin LCH17_18090 PF01648 4'-phosphopantetheinyl transferase superfamily LCH17_18095 PF00877 NlpC/P60 family LCH17_18100 PF05971 RNA methyltransferase LCH17_18105 PF01575 MaoC like domain LCH17_18115 PF17969 L,D-transpeptidase C-terminal domain LCH17_18115 PF01476 LysM domain LCH17_18115 PF03734 L,D-transpeptidase catalytic domain LCH17_18125 PF00873 AcrB/AcrD/AcrF family LCH17_18130 PF00529 HlyD membrane-fusion protein of T1SS LCH17_18130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCH17_18135 PF00072 Response regulator receiver domain LCH17_18135 PF00486 Transcriptional regulatory protein, C terminal LCH17_18140 PF00672 HAMP domain LCH17_18140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_18140 PF00512 His Kinase A (phospho-acceptor) domain LCH17_18140 PF13426 PAS domain LCH17_18145 PF00893 Small Multidrug Resistance protein LCH17_18150 PF00893 Small Multidrug Resistance protein LCH17_18160 PF06130 Phosphate propanoyltransferase LCH17_18165 PF00936 BMC domain LCH17_18170 PF13187 4Fe-4S dicluster domain LCH17_18170 PF04055 Radical SAM superfamily LCH17_18175 PF01228 Glycine radical LCH17_18175 PF02901 Pyruvate formate lyase-like LCH17_18180 PF00171 Aldehyde dehydrogenase family LCH17_18180 PF00465 Iron-containing alcohol dehydrogenase LCH17_18190 PF00171 Aldehyde dehydrogenase family LCH17_18190 PF00465 Iron-containing alcohol dehydrogenase LCH17_18195 PF00936 BMC domain LCH17_18200 PF00936 BMC domain LCH17_18205 PF00936 BMC domain LCH17_18225 PF03466 LysR substrate binding domain LCH17_18225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_18230 PF02634 FdhD/NarQ family LCH17_18235 PF00384 Molybdopterin oxidoreductase LCH17_18250 PF00440 Bacterial regulatory proteins, tetR family LCH17_18255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCH17_18255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCH17_18255 PF02770 Acyl-CoA dehydrogenase, middle domain LCH17_18255 PF09317 Domain of unknown function (DUF1974) LCH17_18260 PF00873 AcrB/AcrD/AcrF family LCH17_18270 PF02887 Pyruvate kinase, alpha/beta domain LCH17_18270 PF00224 Pyruvate kinase, barrel domain LCH17_18275 PF01380 SIS domain LCH17_18275 PF01418 Helix-turn-helix domain, rpiR family LCH17_18280 PF02685 Glucokinase LCH17_18285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_18290 PF00072 Response regulator receiver domain LCH17_18290 PF00486 Transcriptional regulatory protein, C terminal LCH17_18295 PF00664 ABC transporter transmembrane region LCH17_18295 PF00005 ABC transporter LCH17_18295 PF03412 Peptidase C39 family LCH17_18305 PF00664 ABC transporter transmembrane region LCH17_18305 PF00005 ABC transporter LCH17_18305 PF03412 Peptidase C39 family LCH17_18315 PF02794 RTX toxin acyltransferase family LCH17_18320 PF16671 Actin cross-linking domain LCH17_18320 PF12146 Serine aminopeptidase, S33 LCH17_18320 PF07634 RtxA repeat LCH17_18320 PF11713 Peptidase C80 family LCH17_18320 PF11647 Membrane Localization Domain LCH17_18330 PF00919 Uncharacterized protein family UPF0004 LCH17_18330 PF18693 TRAM domain LCH17_18330 PF04055 Radical SAM superfamily LCH17_18335 PF00072 Response regulator receiver domain LCH17_18345 PF02049 Flagellar hook-basal body complex protein FliE LCH17_18350 PF08345 Flagellar M-ring protein C-terminal LCH17_18350 PF01514 Secretory protein of YscJ/FliF family LCH17_18355 PF14842 FliG N-terminal domain LCH17_18355 PF14841 FliG middle domain LCH17_18355 PF01706 FliG C-terminal domain LCH17_18365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LCH17_18365 PF18269 T3SS EscN ATPase C-terminal domain LCH17_18385 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LCH17_18385 PF02154 Flagellar motor switch protein FliM LCH17_18390 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LCH17_18395 PF04347 Flagellar biosynthesis protein, FliO LCH17_18400 PF00813 FliP family LCH17_18405 PF01313 Bacterial export proteins, family 3 LCH17_18410 PF01311 Bacterial export proteins, family 1 LCH17_18415 PF01312 FlhB HrpN YscU SpaS Family LCH17_18420 PF00771 FHIPEP family LCH17_18425 PF00448 SRP54-type protein, GTPase domain LCH17_18430 PF10609 NUBPL iron-transfer P-loop NTPase LCH17_18435 PF04542 Sigma-70 region 2 LCH17_18435 PF04539 Sigma-70 region 3 LCH17_18435 PF04545 Sigma-70, region 4 LCH17_18440 PF00072 Response regulator receiver domain LCH17_18445 PF04344 Chemotaxis phosphatase, CheZ LCH17_18450 PF01584 CheW-like domain LCH17_18450 PF02895 Signal transducing histidine kinase, homodimeric domain LCH17_18450 PF00072 Response regulator receiver domain LCH17_18450 PF01627 Hpt domain LCH17_18450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_18455 PF01339 CheB methylesterase LCH17_18455 PF00072 Response regulator receiver domain LCH17_18460 PF01618 MotA/TolQ/ExbB proton channel family LCH17_18465 PF00691 OmpA family LCH17_18465 PF13677 Membrane MotB of proton-channel complex MotA/MotB LCH17_18470 PF13614 AAA domain LCH17_18480 PF01584 CheW-like domain LCH17_18490 PF00005 ABC transporter LCH17_18495 PF03379 CcmB protein LCH17_18500 PF01578 Cytochrome C assembly protein LCH17_18505 PF04995 Heme exporter protein D (CcmD) LCH17_18510 PF03100 CcmE LCH17_18515 PF01578 Cytochrome C assembly protein LCH17_18515 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LCH17_18520 PF08534 Redoxin LCH17_18525 PF03918 Cytochrome C biogenesis protein LCH17_18530 PF03918 Cytochrome C biogenesis protein LCH17_18535 PF04333 MlaA lipoprotein LCH17_18540 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LCH17_18540 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LCH17_18545 PF00462 Glutaredoxin LCH17_18550 PF01189 16S rRNA methyltransferase RsmB/F LCH17_18550 PF01029 NusB family LCH17_18565 PF01243 Pyridoxamine 5'-phosphate oxidase LCH17_18565 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LCH17_18570 PF02798 Glutathione S-transferase, N-terminal domain LCH17_18580 PF13508 Acetyltransferase (GNAT) domain LCH17_18590 PF08007 Cupin superfamily protein LCH17_18595 PF00206 Lyase LCH17_18595 PF08328 Adenylosuccinate lyase C-terminal LCH17_18600 PF04356 Protein of unknown function (DUF489) LCH17_18610 PF00293 NUDIX domain LCH17_18615 PF00849 RNA pseudouridylate synthase LCH17_18625 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LCH17_18630 PF07690 Major Facilitator Superfamily LCH17_18635 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCH17_18635 PF02378 Phosphotransferase system, EIIC LCH17_18635 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LCH17_18665 PF13411 MerR HTH family regulatory protein LCH17_18670 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH17_18670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LCH17_18675 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LCH17_18675 PF00356 Bacterial regulatory proteins, lacI family LCH17_18680 PF02378 Phosphotransferase system, EIIC LCH17_18680 PF00367 phosphotransferase system, EIIB LCH17_18685 PF00155 Aminotransferase class I and II LCH17_18710 PF01238 Phosphomannose isomerase type I LCH17_18715 PF12833 Helix-turn-helix domain LCH17_18720 PF00180 Isocitrate/isopropylmalate dehydrogenase LCH17_18730 PF00291 Pyridoxal-phosphate dependent enzyme LCH17_18735 PF03466 LysR substrate binding domain LCH17_18735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_18740 PF00480 ROK family LCH17_18745 PF00270 DEAD/DEAH box helicase LCH17_18745 PF00271 Helicase conserved C-terminal domain LCH17_18765 PF01668 SmpB protein LCH17_18770 PF03364 Polyketide cyclase / dehydrase and lipid transport LCH17_18775 PF03658 RnfH family Ubiquitin LCH17_18780 PF13460 NAD(P)H-binding LCH17_18785 PF04355 SmpA / OmlA family LCH17_18790 PF00465 Iron-containing alcohol dehydrogenase LCH17_18795 PF01048 Phosphorylase superfamily LCH17_18800 PF00849 RNA pseudouridylate synthase LCH17_18805 PF01156 Inosine-uridine preferring nucleoside hydrolase LCH17_18820 PF07509 Protein of unknown function (DUF1523) LCH17_18825 PF00672 HAMP domain LCH17_18825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_18830 PF01810 LysE type translocator LCH17_18840 PF03471 Transporter associated domain LCH17_18840 PF00999 Sodium/hydrogen exchanger family LCH17_18840 PF02080 TrkA-C domain LCH17_18850 PF03471 Transporter associated domain LCH17_18850 PF00999 Sodium/hydrogen exchanger family LCH17_18850 PF02080 TrkA-C domain LCH17_18860 PF02557 D-alanyl-D-alanine carboxypeptidase LCH17_18865 PF07687 Peptidase dimerisation domain LCH17_18865 PF01546 Peptidase family M20/M25/M40 LCH17_18870 PF03960 ArsC family LCH17_18875 PF00239 Resolvase, N terminal domain LCH17_18875 PF13408 Recombinase zinc beta ribbon domain LCH17_18875 PF07508 Recombinase LCH17_18890 PF02796 Helix-turn-helix domain of resolvase LCH17_18890 PF00239 Resolvase, N terminal domain LCH17_18905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_18905 PF03466 LysR substrate binding domain LCH17_18915 PF03606 C4-dicarboxylate anaerobic carrier LCH17_18920 PF07687 Peptidase dimerisation domain LCH17_18920 PF01546 Peptidase family M20/M25/M40 LCH17_18930 PF03605 Anaerobic c4-dicarboxylate membrane transporter LCH17_18935 PF01336 OB-fold nucleic acid binding domain LCH17_18935 PF00152 tRNA synthetases class II (D, K and N) LCH17_18950 PF00202 Aminotransferase class-III LCH17_18955 PF06968 Biotin and Thiamin Synthesis associated domain LCH17_18955 PF04055 Radical SAM superfamily LCH17_18960 PF00155 Aminotransferase class I and II LCH17_18965 PF12697 Alpha/beta hydrolase family LCH17_18965 PF08241 Methyltransferase domain LCH17_18975 PF01435 Peptidase family M48 LCH17_18980 PF13426 PAS domain LCH17_18980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_18980 PF08447 PAS fold LCH17_18985 PF03476 MOSC N-terminal beta barrel domain LCH17_18985 PF03473 MOSC domain LCH17_18985 PF03473 MOSC domain LCH17_18985 PF03476 MOSC N-terminal beta barrel domain LCH17_18985 PF00111 2Fe-2S iron-sulfur cluster binding domain LCH17_18985 PF00111 2Fe-2S iron-sulfur cluster binding domain LCH17_18990 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LCH17_18990 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LCH17_18990 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH17_18995 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LCH17_18995 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LCH17_18995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LCH17_18995 PF10371 Domain of unknown function LCH17_18995 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LCH17_19015 PF01554 MatE LCH17_19035 PF00291 Pyridoxal-phosphate dependent enzyme LCH17_19045 PF00465 Iron-containing alcohol dehydrogenase LCH17_19055 PF00440 Bacterial regulatory proteins, tetR family LCH17_19055 PF08359 YsiA-like protein, C-terminal region LCH17_19060 PF00171 Aldehyde dehydrogenase family LCH17_19070 PF00877 NlpC/P60 family LCH17_19075 PF07968 Leukocidin/Hemolysin toxin family LCH17_19075 PF12563 Hemolytic toxin N terminal LCH17_19080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_19080 PF03466 LysR substrate binding domain LCH17_19085 PF10417 C-terminal domain of 1-Cys peroxiredoxin LCH17_19085 PF00578 AhpC/TSA family LCH17_19105 PF08003 Protein of unknown function (DUF1698) LCH17_19110 PF13649 Methyltransferase domain LCH17_19115 PF01904 Protein of unknown function DUF72 LCH17_19120 PF02938 GAD domain LCH17_19120 PF00152 tRNA synthetases class II (D, K and N) LCH17_19120 PF01336 OB-fold nucleic acid binding domain LCH17_19125 PF01709 Transcriptional regulator LCH17_19130 PF08019 Phosphoethanolamine transferase EptA/EptB LCH17_19130 PF00884 Sulfatase LCH17_19135 PF00480 ROK family LCH17_19135 PF01047 MarR family LCH17_19140 PF01979 Amidohydrolase family LCH17_19145 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LCH17_19150 PF02378 Phosphotransferase system, EIIC LCH17_19150 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LCH17_19150 PF00367 phosphotransferase system, EIIB LCH17_19155 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain LCH17_19155 PF03173 Putative carbohydrate binding domain LCH17_19155 PF02838 Glycosyl hydrolase family 20, domain 2 LCH17_19155 PF00728 Glycosyl hydrolase family 20, catalytic domain LCH17_19165 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LCH17_19165 PF00749 tRNA synthetases class I (E and Q), catalytic domain LCH17_19170 PF01475 Ferric uptake regulator family LCH17_19180 PF00258 Flavodoxin LCH17_19185 PF01402 Ribbon-helix-helix protein, copG family LCH17_19195 PF12697 Alpha/beta hydrolase family LCH17_19200 PF03925 SeqA protein C-terminal domain LCH17_19200 PF17206 SeqA protein N-terminal domain LCH17_19205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LCH17_19205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LCH17_19205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LCH17_19205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LCH17_19215 PF01047 MarR family LCH17_19230 PF13406 Transglycosylase SLT domain LCH17_19235 PF01066 CDP-alcohol phosphatidyltransferase LCH17_19240 PF00005 ABC transporter LCH17_19245 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_19250 PF13416 Bacterial extracellular solute-binding protein LCH17_19255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCH17_19255 PF00403 Heavy-metal-associated domain LCH17_19255 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH17_19260 PF02627 Carboxymuconolactone decarboxylase family LCH17_19270 PF01625 Peptide methionine sulfoxide reductase LCH17_19275 PF05698 Bacterial trigger factor protein (TF) C-terminus LCH17_19285 PF07244 Surface antigen variable number repeat LCH17_19285 PF01103 Surface antigen LCH17_19285 PF17243 POTRA domain TamA domain 1 LCH17_19290 PF04357 TamB, inner membrane protein subunit of TAM complex LCH17_19310 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LCH17_19315 PF00563 EAL domain LCH17_19315 PF00990 Diguanylate cyclase, GGDEF domain LCH17_19315 PF03707 Bacterial signalling protein N terminal repeat LCH17_19320 PF14718 Soluble lytic murein transglycosylase L domain LCH17_19320 PF01464 Transglycosylase SLT domain LCH17_19325 PF00356 Bacterial regulatory proteins, lacI family LCH17_19335 PF03061 Thioesterase superfamily LCH17_19345 PF03372 Endonuclease/Exonuclease/phosphatase family LCH17_19350 PF01476 LysM domain LCH17_19350 PF01464 Transglycosylase SLT domain LCH17_19360 PF16123 Hydroxyacylglutathione hydrolase C-terminus LCH17_19360 PF00753 Metallo-beta-lactamase superfamily LCH17_19365 PF08241 Methyltransferase domain LCH17_19370 PF00075 RNase H LCH17_19375 PF00929 Exonuclease LCH17_19385 PF11849 Domain of unknown function (DUF3369) LCH17_19390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCH17_19390 PF09317 Domain of unknown function (DUF1974) LCH17_19390 PF02770 Acyl-CoA dehydrogenase, middle domain LCH17_19390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCH17_19395 PF13580 SIS domain LCH17_19400 PF13230 Glutamine amidotransferases class-II LCH17_19410 PF01933 Uncharacterised protein family UPF0052 LCH17_19420 PF00072 Response regulator receiver domain LCH17_19420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_19420 PF09456 RcsC Alpha-Beta-Loop (ABL) LCH17_19420 PF00512 His Kinase A (phospho-acceptor) domain LCH17_19430 PF00196 Bacterial regulatory proteins, luxR family LCH17_19430 PF00072 Response regulator receiver domain LCH17_19435 PF00672 HAMP domain LCH17_19435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_19435 PF07730 Histidine kinase LCH17_19435 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LCH17_19440 PF04055 Radical SAM superfamily LCH17_19440 PF06463 Molybdenum Cofactor Synthesis C LCH17_19445 PF13187 4Fe-4S dicluster domain LCH17_19445 PF12800 4Fe-4S binding domain LCH17_19445 PF00037 4Fe-4S binding domain LCH17_19455 PF10518 TAT (twin-arginine translocation) pathway signal sequence LCH17_19455 PF00384 Molybdopterin oxidoreductase LCH17_19455 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LCH17_19455 PF01568 Molydopterin dinucleotide binding domain LCH17_19460 PF12800 4Fe-4S binding domain LCH17_19460 PF12838 4Fe-4S dicluster domain LCH17_19465 PF13237 4Fe-4S dicluster domain LCH17_19465 PF12801 4Fe-4S binding domain LCH17_19470 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LCH17_19475 PF03264 NapC/NirT cytochrome c family, N-terminal region LCH17_19480 PF00994 Probable molybdopterin binding domain LCH17_19485 PF01967 MoaC family LCH17_19490 PF02597 ThiS family LCH17_19495 PF02391 MoaE protein LCH17_19505 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_19510 PF00005 ABC transporter LCH17_19510 PF03459 TOBE domain LCH17_19515 PF00561 alpha/beta hydrolase fold LCH17_19520 PF00899 ThiF family LCH17_19525 PF00994 Probable molybdopterin binding domain LCH17_19525 PF03454 MoeA C-terminal region (domain IV) LCH17_19525 PF03453 MoeA N-terminal region (domain I and II) LCH17_19530 PF01227 GTP cyclohydrolase I LCH17_19535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_19535 PF17200 Single Cache domain 2 LCH17_19535 PF00672 HAMP domain LCH17_19540 PF01268 Formate--tetrahydrofolate ligase LCH17_19550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_19550 PF03466 LysR substrate binding domain LCH17_19555 PF04264 YceI-like domain LCH17_19580 PF07687 Peptidase dimerisation domain LCH17_19580 PF01546 Peptidase family M20/M25/M40 LCH17_19590 PF17810 Arginine decarboxylase helical bundle domain LCH17_19590 PF17944 Arginine decarboxylase C-terminal helical extension LCH17_19590 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LCH17_19605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_19605 PF00672 HAMP domain LCH17_19615 PF01042 Endoribonuclease L-PSP LCH17_19620 PF03313 Serine dehydratase alpha chain LCH17_19625 PF13309 HTH domain LCH17_19625 PF08348 YheO-like PAS domain LCH17_19630 PF00300 Histidine phosphatase superfamily (branch 1) LCH17_19635 PF09019 EcoRII C terminal LCH17_19640 PF18284 DNA methylase N-terminal domain LCH17_19640 PF00145 C-5 cytosine-specific DNA methylase LCH17_19645 PF03852 DNA mismatch endonuclease Vsr LCH17_19655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCH17_19665 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LCH17_19665 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LCH17_19670 PF00849 RNA pseudouridylate synthase LCH17_19670 PF01479 S4 domain LCH17_19675 PF07690 Major Facilitator Superfamily LCH17_19685 PF03466 LysR substrate binding domain LCH17_19685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_19690 PF07690 Major Facilitator Superfamily LCH17_19700 PF10689 Protein of unknown function (DUF2496) LCH17_19705 PF03061 Thioesterase superfamily LCH17_19715 PF04391 Protein of unknown function (DUF533) LCH17_19720 PF00155 Aminotransferase class I and II LCH17_19720 PF00392 Bacterial regulatory proteins, gntR family LCH17_19725 PF01654 Cytochrome bd terminal oxidase subunit I LCH17_19730 PF02322 Cytochrome bd terminal oxidase subunit II LCH17_19740 PF07690 Major Facilitator Superfamily LCH17_19745 PF00248 Aldo/keto reductase family LCH17_19765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_19765 PF03466 LysR substrate binding domain LCH17_19770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LCH17_19770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LCH17_19775 PF00230 Major intrinsic protein LCH17_19780 PF07690 Major Facilitator Superfamily LCH17_19785 PF08220 DeoR-like helix-turn-helix domain LCH17_19785 PF00455 DeoR C terminal sensor domain LCH17_19795 PF01266 FAD dependent oxidoreductase LCH17_19795 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LCH17_19800 PF03009 Glycerophosphoryl diester phosphodiesterase family LCH17_19805 PF00793 DAHP synthetase I family LCH17_19810 PF01817 Chorismate mutase type II LCH17_19810 PF02153 Prephenate dehydrogenase LCH17_19815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_19815 PF03466 LysR substrate binding domain LCH17_19820 PF04219 Protein of unknown function, DUF LCH17_19825 PF03974 Ecotin LCH17_19845 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LCH17_19845 PF00326 Prolyl oligopeptidase family LCH17_19850 PF00593 TonB dependent receptor LCH17_19850 PF07715 TonB-dependent Receptor Plug Domain LCH17_19855 PF11893 Domain of unknown function (DUF3413) LCH17_19855 PF00884 Sulfatase LCH17_19860 PF07208 Protein of unknown function (DUF1414) LCH17_19865 PF04245 37-kD nucleoid-associated bacterial protein LCH17_19870 PF01547 Bacterial extracellular solute-binding protein LCH17_19875 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_19875 PF14785 Maltose transport system permease protein MalF P2 domain LCH17_19880 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_19885 PF08402 TOBE domain LCH17_19885 PF00005 ABC transporter LCH17_19890 PF03976 Polyphosphate kinase 2 (PPK2) LCH17_19895 PF00561 alpha/beta hydrolase fold LCH17_19905 PF01594 AI-2E family transporter LCH17_19910 PF01206 Sulfurtransferase TusA LCH17_19915 PF13181 Tetratricopeptide repeat LCH17_19915 PF01435 Peptidase family M48 LCH17_19920 PF00578 AhpC/TSA family LCH17_19925 PF03960 ArsC family LCH17_19940 PF04336 Acyl carrier protein phosphodiesterase LCH17_19945 PF01979 Amidohydrolase family LCH17_19950 PF03956 Lysine exporter LysO LCH17_19955 PF00005 ABC transporter LCH17_19960 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH17_19965 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_19970 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_19980 PF04055 Radical SAM superfamily LCH17_19985 PF03707 Bacterial signalling protein N terminal repeat LCH17_19985 PF00563 EAL domain LCH17_19985 PF00990 Diguanylate cyclase, GGDEF domain LCH17_19990 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH17_19990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCH17_19995 PF00207 Alpha-2-macroglobulin family LCH17_19995 PF07703 Alpha-2-macroglobulin bait region domain LCH17_19995 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LCH17_19995 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LCH17_19995 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LCH17_19995 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LCH17_19995 PF17962 Bacterial macroglobulin domain 6 LCH17_19995 PF07678 A-macroglobulin TED domain LCH17_19995 PF01835 MG2 domain LCH17_20000 PF00912 Transglycosylase LCH17_20000 PF00905 Penicillin binding protein transpeptidase domain LCH17_20000 PF06832 Penicillin-Binding Protein C-terminus Family LCH17_20010 PF02568 Thiamine biosynthesis protein (ThiI) LCH17_20010 PF02926 THUMP domain LCH17_20020 PF03458 UPF0126 domain LCH17_20025 PF00700 Bacterial flagellin C-terminal helical region LCH17_20025 PF07196 Flagellin hook IN motif LCH17_20025 PF00669 Bacterial flagellin N-terminal helical region LCH17_20030 PF07196 Flagellin hook IN motif LCH17_20030 PF00700 Bacterial flagellin C-terminal helical region LCH17_20030 PF00669 Bacterial flagellin N-terminal helical region LCH17_20040 PF02465 Flagellar hook-associated protein 2 N-terminus LCH17_20040 PF07196 Flagellin hook IN motif LCH17_20040 PF07195 Flagellar hook-associated protein 2 C-terminus LCH17_20045 PF02561 Flagellar protein FliS LCH17_20060 PF02348 Cytidylyltransferase LCH17_20065 PF00483 Nucleotidyl transferase LCH17_20080 PF02350 UDP-N-acetylglucosamine 2-epimerase LCH17_20085 PF08666 SAF domain LCH17_20085 PF03102 NeuB family LCH17_20095 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LCH17_20100 PF02719 Polysaccharide biosynthesis protein LCH17_20105 PF01497 Periplasmic binding protein LCH17_20115 PF01048 Phosphorylase superfamily LCH17_20125 PF02535 ZIP Zinc transporter LCH17_20130 PF00672 HAMP domain LCH17_20130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_20130 PF12729 Four helix bundle sensory module for signal transduction LCH17_20135 PF00459 Inositol monophosphatase family LCH17_20145 PF00043 Glutathione S-transferase, C-terminal domain LCH17_20145 PF02798 Glutathione S-transferase, N-terminal domain LCH17_20150 PF07690 Major Facilitator Superfamily LCH17_20160 PF05164 Cell division protein ZapA LCH17_20165 PF03695 Uncharacterised protein family (UPF0149) LCH17_20170 PF01494 FAD binding domain LCH17_20175 PF01494 FAD binding domain LCH17_20180 PF01571 Aminomethyltransferase folate-binding domain LCH17_20180 PF08669 Glycine cleavage T-protein C-terminal barrel domain LCH17_20185 PF01597 Glycine cleavage H-protein LCH17_20190 PF02347 Glycine cleavage system P-protein LCH17_20210 PF06953 Arsenical resistance operon trans-acting repressor ArsD LCH17_20215 PF02374 Anion-transporting ATPase LCH17_20220 PF01758 Sodium Bile acid symporter family LCH17_20225 PF03960 ArsC family LCH17_20230 PF08241 Methyltransferase domain LCH17_20240 PF07690 Major Facilitator Superfamily LCH17_20245 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH17_20245 PF13192 Thioredoxin domain LCH17_20250 PF00578 AhpC/TSA family LCH17_20250 PF10417 C-terminal domain of 1-Cys peroxiredoxin LCH17_20255 PF00571 CBS domain LCH17_20260 PF02547 Queuosine biosynthesis protein LCH17_20265 PF01702 Queuine tRNA-ribosyltransferase LCH17_20270 PF02699 Preprotein translocase subunit LCH17_20275 PF07549 SecD/SecF GG Motif LCH17_20275 PF13721 SecD export protein N-terminal TM region LCH17_20275 PF02355 Protein export membrane protein LCH17_20280 PF07549 SecD/SecF GG Motif LCH17_20280 PF02355 Protein export membrane protein LCH17_20290 PF13181 Tetratricopeptide repeat LCH17_20290 PF07719 Tetratricopeptide repeat LCH17_20295 PF01136 Peptidase family U32 LCH17_20300 PF01136 Peptidase family U32 LCH17_20305 PF02036 SCP-2 sterol transfer family LCH17_20315 PF00588 SpoU rRNA Methylase family LCH17_20320 PF02082 Transcriptional regulator LCH17_20325 PF00266 Aminotransferase class-V LCH17_20330 PF01592 NifU-like N terminal domain LCH17_20335 PF01521 Iron-sulphur cluster biosynthesis LCH17_20340 PF07743 HSCB C-terminal oligomerisation domain LCH17_20345 PF00012 Hsp70 protein LCH17_20350 PF00111 2Fe-2S iron-sulfur cluster binding domain LCH17_20355 PF12404 Peptidase LCH17_20355 PF00883 Cytosol aminopeptidase family, catalytic domain LCH17_20360 PF00883 Cytosol aminopeptidase family, catalytic domain LCH17_20360 PF12404 Peptidase LCH17_20365 PF00334 Nucleoside diphosphate kinase LCH17_20370 PF04055 Radical SAM superfamily LCH17_20380 PF13464 Domain of unknown function (DUF4115) LCH17_20385 PF04551 GcpE protein LCH17_20390 PF03129 Anticodon binding domain LCH17_20390 PF13393 Histidyl-tRNA synthetase LCH17_20395 PF09976 Tetratricopeptide repeat-like domain LCH17_20400 PF13360 PQQ-like domain LCH17_20405 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LCH17_20405 PF01926 50S ribosome-binding GTPase LCH17_20410 PF07191 zinc-ribbons LCH17_20415 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH17_20415 PF01464 Transglycosylase SLT domain LCH17_20420 PF02769 AIR synthase related protein, C-terminal domain LCH17_20420 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LCH17_20420 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LCH17_20425 PF00361 Proton-conducting membrane transporter LCH17_20430 PF00361 Proton-conducting membrane transporter LCH17_20435 PF00361 Proton-conducting membrane transporter LCH17_20435 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LCH17_20440 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LCH17_20445 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LCH17_20450 PF12838 4Fe-4S dicluster domain LCH17_20455 PF00146 NADH dehydrogenase LCH17_20460 PF00384 Molybdopterin oxidoreductase LCH17_20460 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LCH17_20460 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LCH17_20465 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LCH17_20465 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LCH17_20475 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LCH17_20475 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LCH17_20480 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LCH17_20485 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LCH17_20490 PF13677 Membrane MotB of proton-channel complex MotA/MotB LCH17_20490 PF00691 OmpA family LCH17_20495 PF01618 MotA/TolQ/ExbB proton channel family LCH17_20510 PF04536 TPM domain LCH17_20520 PF03411 Penicillin-insensitive murein endopeptidase LCH17_20530 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LCH17_20535 PF00248 Aldo/keto reductase family LCH17_20550 PF01212 Beta-eliminating lyase LCH17_20560 PF00072 Response regulator receiver domain LCH17_20565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_20565 PF03466 LysR substrate binding domain LCH17_20575 PF00563 EAL domain LCH17_20575 PF00990 Diguanylate cyclase, GGDEF domain LCH17_20575 PF03707 Bacterial signalling protein N terminal repeat LCH17_20575 PF13188 PAS domain LCH17_20580 PF00881 Nitroreductase family LCH17_20595 PF07690 Major Facilitator Superfamily LCH17_20600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_20600 PF03466 LysR substrate binding domain LCH17_20605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_20605 PF03466 LysR substrate binding domain LCH17_20610 PF00925 GTP cyclohydrolase II LCH17_20615 PF02224 Cytidylate kinase LCH17_20620 PF00575 S1 RNA binding domain LCH17_20625 PF00216 Bacterial DNA-binding protein LCH17_20635 PF18073 Rubredoxin metal binding domain LCH17_20640 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LCH17_20655 PF06508 Queuosine biosynthesis protein QueC LCH17_20660 PF04055 Radical SAM superfamily LCH17_20665 PF12843 Putative quorum-sensing-regulated virulence factor LCH17_20670 PF01923 Cobalamin adenosyltransferase LCH17_20675 PF00816 H-NS histone family LCH17_20680 PF03553 Na+/H+ antiporter family LCH17_20685 PF00265 Thymidine kinase LCH17_20695 PF10722 Putative bacterial sensory transduction regulator LCH17_20710 PF05638 Type VI secretion system effector, Hcp LCH17_20715 PF04717 Type VI secretion system, phage-baseplate injector LCH17_20745 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LCH17_20755 PF05947 Type VI secretion system, TssF LCH17_20775 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LCH17_20785 PF10431 C-terminal, D2-small domain, of ClpB protein LCH17_20785 PF17871 AAA lid domain LCH17_20785 PF07724 AAA domain (Cdc48 subfamily) LCH17_20785 PF00004 ATPase family associated with various cellular activities (AAA) LCH17_20790 PF02954 Bacterial regulatory protein, Fis family LCH17_20790 PF00158 Sigma-54 interaction domain LCH17_20820 PF04717 Type VI secretion system, phage-baseplate injector LCH17_20850 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LCH17_20850 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LCH17_20855 PF00313 'Cold-shock' DNA-binding domain LCH17_20860 PF02617 ATP-dependent Clp protease adaptor protein ClpS LCH17_20865 PF00004 ATPase family associated with various cellular activities (AAA) LCH17_20865 PF07724 AAA domain (Cdc48 subfamily) LCH17_20865 PF17871 AAA lid domain LCH17_20865 PF10431 C-terminal, D2-small domain, of ClpB protein LCH17_20865 PF02861 Clp amino terminal domain, pathogenicity island component LCH17_20870 PF01176 Translation initiation factor 1A / IF-1 LCH17_20875 PF04377 Arginine-tRNA-protein transferase, C terminus LCH17_20875 PF04376 Arginine-tRNA-protein transferase, N terminus LCH17_20880 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LCH17_20885 PF05433 Glycine zipper 2TM domain LCH17_20890 PF17158 Membrane-associated sensor, integral membrane domain LCH17_20890 PF00990 Diguanylate cyclase, GGDEF domain LCH17_20895 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH17_20900 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LCH17_20900 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LCH17_20905 PF01037 Lrp/AsnC ligand binding domain LCH17_20910 PF01580 FtsK/SpoIIIE family LCH17_20910 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LCH17_20910 PF17854 FtsK alpha domain LCH17_20910 PF09397 Ftsk gamma domain LCH17_20915 PF03548 Outer membrane lipoprotein carrier protein LolA LCH17_20920 PF16193 AAA C-terminal domain LCH17_20920 PF12002 MgsA AAA+ ATPase C terminal LCH17_20920 PF00004 ATPase family associated with various cellular activities (AAA) LCH17_20925 PF02403 Seryl-tRNA synthetase N-terminal domain LCH17_20925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LCH17_20930 PF02674 Colicin V production protein LCH17_20935 PF00156 Phosphoribosyl transferase domain LCH17_20940 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LCH17_20945 PF00005 ABC transporter LCH17_20950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCH17_20950 PF00005 ABC transporter LCH17_20955 PF12911 N-terminal TM domain of oligopeptide transport permease C LCH17_20955 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_20960 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_20965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCH17_20970 PF00158 Sigma-54 interaction domain LCH17_20970 PF02954 Bacterial regulatory protein, Fis family LCH17_20975 PF04012 PspA/IM30 family LCH17_20980 PF06667 Phage shock protein B LCH17_20990 PF04317 YcjX-like family, DUF463 LCH17_20995 PF05128 Domain of unknown function (DUF697) LCH17_21000 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LCH17_21010 PF18024 Helix-turn-helix domain LCH17_21010 PF00158 Sigma-54 interaction domain LCH17_21015 PF13689 YfiR/HmsC-like LCH17_21020 PF00990 Diguanylate cyclase, GGDEF domain LCH17_21020 PF17152 Periplasmic sensor domain LCH17_21025 PF00691 OmpA family LCH17_21030 PF03741 Integral membrane protein TerC family LCH17_21040 PF08891 YfcL protein LCH17_21045 PF00501 AMP-binding enzyme LCH17_21050 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LCH17_21050 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region LCH17_21055 PF04172 LrgB-like family LCH17_21060 PF03788 LrgA family LCH17_21075 PF00929 Exonuclease LCH17_21075 PF08411 Exonuclease C-terminal LCH17_21080 PF11762 L-arabinose isomerase C-terminal domain LCH17_21080 PF02610 L-arabinose isomerase LCH17_21085 PF00596 Class II Aldolase and Adducin N-terminal domain LCH17_21090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LCH17_21095 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LCH17_21100 PF00005 ABC transporter LCH17_21105 PF02653 Branched-chain amino acid transport system / permease component LCH17_21110 PF02311 AraC-like ligand binding domain LCH17_21110 PF12833 Helix-turn-helix domain LCH17_21115 PF03466 LysR substrate binding domain LCH17_21115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_21120 PF02678 Pirin LCH17_21120 PF05726 Pirin C-terminal cupin domain LCH17_21125 PF00444 Ribosomal protein L36 LCH17_21130 PF01197 Ribosomal protein L31 LCH17_21145 PF01863 Protein of unknown function DUF45 LCH17_21160 PF03606 C4-dicarboxylate anaerobic carrier LCH17_21170 PF01266 FAD dependent oxidoreductase LCH17_21170 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LCH17_21175 PF00109 Beta-ketoacyl synthase, N-terminal domain LCH17_21175 PF02801 Beta-ketoacyl synthase, C-terminal domain LCH17_21190 PF00285 Citrate synthase, C-terminal domain LCH17_21195 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LCH17_21200 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LCH17_21205 PF00890 FAD binding domain LCH17_21205 PF02910 Fumarate reductase flavoprotein C-term LCH17_21210 PF13085 2Fe-2S iron-sulfur cluster binding domain LCH17_21215 PF00676 Dehydrogenase E1 component LCH17_21215 PF16078 2-oxoglutarate dehydrogenase N-terminus LCH17_21215 PF16870 2-oxoglutarate dehydrogenase C-terminal LCH17_21215 PF02779 Transketolase, pyrimidine binding domain LCH17_21220 PF00364 Biotin-requiring enzyme LCH17_21220 PF02817 e3 binding domain LCH17_21220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LCH17_21225 PF08442 ATP-grasp domain LCH17_21225 PF00549 CoA-ligase LCH17_21230 PF02629 CoA binding domain LCH17_21230 PF00549 CoA-ligase LCH17_21235 PF03692 Putative zinc- or iron-chelating domain LCH17_21240 PF01266 FAD dependent oxidoreductase LCH17_21245 PF00528 Binding-protein-dependent transport system inner membrane component LCH17_21250 PF00005 ABC transporter LCH17_21260 PF00392 Bacterial regulatory proteins, gntR family LCH17_21260 PF07702 UTRA domain LCH17_21265 PF00266 Aminotransferase class-V LCH17_21270 PF00202 Aminotransferase class-III LCH17_21280 PF02901 Pyruvate formate lyase-like LCH17_21280 PF01228 Glycine radical LCH17_21285 PF01226 Formate/nitrite transporter LCH17_21290 PF18381 YcaO cyclodehydratase C-terminal domain LCH17_21290 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LCH17_21295 PF00893 Small Multidrug Resistance protein LCH17_21300 PF02774 Semialdehyde dehydrogenase, dimerisation domain LCH17_21300 PF01118 Semialdehyde dehydrogenase, NAD binding domain LCH17_21305 PF00675 Insulinase (Peptidase family M16) LCH17_21305 PF05193 Peptidase M16 inactive domain LCH17_21310 PF01053 Cys/Met metabolism PLP-dependent enzyme LCH17_21320 PF13460 NAD(P)H-binding LCH17_21325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_21325 PF03466 LysR substrate binding domain LCH17_21330 PF00106 short chain dehydrogenase LCH17_21335 PF12833 Helix-turn-helix domain LCH17_21340 PF07715 TonB-dependent Receptor Plug Domain LCH17_21340 PF00593 TonB dependent receptor LCH17_21350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_21350 PF03466 LysR substrate binding domain LCH17_21355 PF08267 Cobalamin-independent synthase, N-terminal domain LCH17_21355 PF01717 Cobalamin-independent synthase, Catalytic domain LCH17_21365 PF00478 IMP dehydrogenase / GMP reductase domain LCH17_21365 PF00571 CBS domain LCH17_21380 PF01266 FAD dependent oxidoreductase LCH17_21385 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LCH17_21395 PF01212 Beta-eliminating lyase LCH17_21400 PF00768 D-alanyl-D-alanine carboxypeptidase LCH17_21410 PF03918 Cytochrome C biogenesis protein LCH17_21415 PF08534 Redoxin LCH17_21420 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LCH17_21420 PF01578 Cytochrome C assembly protein LCH17_21425 PF03916 Polysulphide reductase, NrfD LCH17_21430 PF00037 4Fe-4S binding domain LCH17_21430 PF13247 4Fe-4S dicluster domain LCH17_21435 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) LCH17_21435 PF13435 Cytochrome c554 and c-prime LCH17_21440 PF02335 Cytochrome c552 LCH17_21455 PF02754 Cysteine-rich domain LCH17_21455 PF13183 4Fe-4S dicluster domain LCH17_21460 PF00890 FAD binding domain LCH17_21465 PF01266 FAD dependent oxidoreductase LCH17_21465 PF04324 BFD-like [2Fe-2S] binding domain LCH17_21470 PF02810 SEC-C motif LCH17_21475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_21475 PF17200 Single Cache domain 2 LCH17_21475 PF00672 HAMP domain LCH17_21480 PF01047 MarR family LCH17_21480 PF00480 ROK family LCH17_21485 PF00989 PAS fold LCH17_21485 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LCH17_21485 PF17203 Single cache domain 3 LCH17_21485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_21490 PF12431 Transcriptional regulator LCH17_21490 PF08279 HTH domain LCH17_21490 PF00072 Response regulator receiver domain LCH17_21495 PF01970 Tripartite tricarboxylate transporter TctA family LCH17_21510 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH17_21510 PF01464 Transglycosylase SLT domain LCH17_21515 PF02080 TrkA-C domain LCH17_21515 PF06826 Predicted Permease Membrane Region LCH17_21525 PF00271 Helicase conserved C-terminal domain LCH17_21525 PF04851 Type III restriction enzyme, res subunit LCH17_21525 PF02151 UvrB/uvrC motif LCH17_21525 PF12344 Ultra-violet resistance protein B LCH17_21525 PF17757 UvrB interaction domain LCH17_21535 PF09335 SNARE associated Golgi protein LCH17_21540 PF02600 Disulfide bond formation protein DsbB LCH17_21545 PF06450 Bacterial Na+/H+ antiporter B (NhaB) LCH17_21550 PF07840 FadR C-terminal domain LCH17_21550 PF00392 Bacterial regulatory proteins, gntR family LCH17_21555 PF04293 SpoVR like protein LCH17_21560 PF04285 Protein of unknown function (DUF444) LCH17_21565 PF06798 PrkA serine protein kinase C-terminal domain LCH17_21565 PF08298 PrkA AAA domain LCH17_21570 PF00270 DEAD/DEAH box helicase LCH17_21570 PF00271 Helicase conserved C-terminal domain LCH17_21570 PF00570 HRDC domain LCH17_21570 PF16124 RecQ zinc-binding LCH17_21570 PF09382 RQC domain LCH17_21575 PF00375 Sodium:dicarboxylate symporter family LCH17_21580 PF03222 Tryptophan/tyrosine permease family LCH17_21585 PF00293 NUDIX domain LCH17_21590 PF04715 Anthranilate synthase component I, N terminal region LCH17_21590 PF00425 chorismate binding enzyme LCH17_21610 PF00343 Carbohydrate phosphorylase LCH17_21615 PF00939 Sodium:sulfate symporter transmembrane region LCH17_21620 PF00085 Thioredoxin LCH17_21625 PF00672 HAMP domain LCH17_21625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH17_21625 PF00072 Response regulator receiver domain LCH17_21625 PF01627 Hpt domain LCH17_21625 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LCH17_21625 PF00512 His Kinase A (phospho-acceptor) domain LCH17_21630 PF00664 ABC transporter transmembrane region LCH17_21630 PF00005 ABC transporter LCH17_21635 PF00664 ABC transporter transmembrane region LCH17_21635 PF00005 ABC transporter LCH17_21650 PF01575 MaoC like domain LCH17_21655 PF00561 alpha/beta hydrolase fold LCH17_21655 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus LCH17_21680 PF08543 Phosphomethylpyrimidine kinase LCH17_21685 PF03992 Antibiotic biosynthesis monooxygenase LCH17_21690 PF00465 Iron-containing alcohol dehydrogenase LCH17_21695 PF00583 Acetyltransferase (GNAT) family LCH17_21705 PF01928 CYTH domain LCH17_21715 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LCH17_21725 PF13673 Acetyltransferase (GNAT) domain LCH17_21730 PF00270 DEAD/DEAH box helicase LCH17_21730 PF00271 Helicase conserved C-terminal domain LCH17_21735 PF00255 Glutathione peroxidase LCH17_21745 PF01820 D-ala D-ala ligase N-terminus LCH17_21745 PF07478 D-ala D-ala ligase C-terminus LCH17_21750 PF18029 Glyoxalase-like domain LCH17_21750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCH17_21755 PF03942 DTW domain LCH17_21760 PF01925 Sulfite exporter TauE/SafE LCH17_21765 PF03466 LysR substrate binding domain LCH17_21765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH17_21775 PF14525 AraC-binding-like domain LCH17_21775 PF12833 Helix-turn-helix domain LCH17_21780 PF11398 Protein of unknown function (DUF2813) LCH17_21790 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LCH17_21790 PF00128 Alpha amylase, catalytic domain LCH17_21840 PF02789 Cytosol aminopeptidase family, N-terminal domain LCH17_21840 PF00883 Cytosol aminopeptidase family, catalytic domain LCH17_21845 PF13419 Haloacid dehalogenase-like hydrolase LCH17_21850 PF07687 Peptidase dimerisation domain LCH17_21850 PF01546 Peptidase family M20/M25/M40 LCH17_21855 PF00365 Phosphofructokinase LCH17_21860 PF00121 Triosephosphate isomerase LCH17_21865 PF02698 DUF218 domain LCH17_21870 PF13847 Methyltransferase domain LCH17_21875 PF03882 MukF winged-helix domain LCH17_21875 PF17192 MukF middle domain LCH17_21875 PF17193 MukF C-terminal domain LCH17_21880 PF04288 MukE-like family LCH17_21885 PF04310 MukB N-terminal LCH17_21885 PF16330 MukB hinge domain LCH17_21890 PF03330 Lytic transglycolase LCH17_21890 PF05036 Sporulation related domain LCH17_21905 PF01327 Polypeptide deformylase LCH17_21940 PF02567 Phenazine biosynthesis-like protein LCH17_21950 PF03831 PhnA domain LCH17_21950 PF08274 PhnA Zinc-Ribbon LCH17_21960 PF00704 Glycosyl hydrolases family 18 LCH17_21960 PF08329 Chitinase A, N-terminal domain LCH17_21975 PF00934 PE family LCH17_21975 PF00300 Histidine phosphatase superfamily (branch 1) LCH17_21980 PF00990 Diguanylate cyclase, GGDEF domain LCH17_21980 PF08448 PAS fold LCH17_21990 PF01713 Smr domain LCH17_21995 PF05175 Methyltransferase small domain LCH17_22000 PF01264 Chorismate synthase LCH17_22010 PF00271 Helicase conserved C-terminal domain LCH17_22010 PF00270 DEAD/DEAH box helicase LCH17_22025 PF03222 Tryptophan/tyrosine permease family LCH17_22030 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LCH17_22030 PF00356 Bacterial regulatory proteins, lacI family LCH17_22035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCH17_22035 PF00381 PTS HPr component phosphorylation site LCH17_22040 PF00294 pfkB family carbohydrate kinase LCH17_22045 PF02378 Phosphotransferase system, EIIC LCH17_22045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LCH17_22050 PF06560 Glucose-6-phosphate isomerase (GPI) LCH17_22055 PF00356 Bacterial regulatory proteins, lacI family LCH17_22055 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LCH17_22070 PF03830 PTS system sorbose subfamily IIB component LCH17_22070 PF03610 PTS system fructose IIA component LCH17_22075 PF03609 PTS system sorbose-specific iic component LCH17_22080 PF03613 PTS system mannose/fructose/sorbose family IID component LCH17_22090 PF06945 Protein of unknown function (DUF1289) LCH17_22095 PF06725 3D domain LCH17_22095 PF03562 MltA specific insert domain LCH17_22100 PF00111 2Fe-2S iron-sulfur cluster binding domain LCH17_22105 PF00268 Ribonucleotide reductase, small chain LCH17_22110 PF03477 ATP cone domain LCH17_22110 PF02867 Ribonucleotide reductase, barrel domain LCH17_22110 PF00317 Ribonucleotide reductase, all-alpha domain LCH17_22115 PF13419 Haloacid dehalogenase-like hydrolase LCH17_22125 PF03989 DNA gyrase C-terminal domain, beta-propeller LCH17_22125 PF00521 DNA gyrase/topoisomerase IV, subunit A LCH17_22135 PF04055 Radical SAM superfamily LCH17_22145 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LCH17_22145 PF03129 Anticodon binding domain LCH17_22145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LCH17_22145 PF02824 TGS domain LCH17_22150 PF00707 Translation initiation factor IF-3, C-terminal domain LCH17_22150 PF05198 Translation initiation factor IF-3, N-terminal domain LCH17_22155 PF01632 Ribosomal protein L35 LCH17_22160 PF00453 Ribosomal protein L20 LCH17_22325 PF03230 Antirestriction protein LCH17_22335 PF17394 Uncharacterized KleE stable inheritance protein LCH17_22350 PF16509 TrfB plasmid transcriptional repressor LCH17_22355 PF13614 AAA domain LCH17_22360 PF08535 KorB domain LCH17_22360 PF06613 KorB C-terminal beta-barrel domain LCH17_22360 PF02195 ParB-like nuclease domain LCH17_22365 PF00816 H-NS histone family LCH17_22380 PF11740 Plasmid replication region DNA-binding N-term LCH17_22400 PF11657 Transcriptional activator TraM LCH17_22405 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LCH17_22410 PF17273 Family of unknown function (DUF5338) LCH17_22420 PF03432 Relaxase/Mobilisation nuclease domain LCH17_22420 PF18821 Large polyvalent protein-associated domain 7 LCH17_22425 PF02534 Type IV secretory system Conjugative DNA transfer LCH17_22430 PF10502 Signal peptidase, peptidase S26 LCH17_22435 PF01131 DNA topoisomerase LCH17_22435 PF01751 Toprim domain LCH17_22445 PF08401 Domain of unknown function (DUF1738) LCH17_22445 PF18818 Metallopeptidase superfamily domain LCH17_22445 PF13362 Toprim domain LCH17_22525 PF07963 Prokaryotic N-terminal methylation motif LCH17_22525 PF00114 Pilin (bacterial filament) LCH17_22535 PF00437 Type II/IV secretion system protein LCH17_22590 PF03743 Bacterial conjugation TrbI-like protein LCH17_22600 PF03524 Conjugal transfer protein LCH17_22610 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LCH17_22625 PF00437 Type II/IV secretion system protein LCH17_22635 PF00436 Single-strand binding protein family LCH17_22645 PF00589 Phage integrase family LCH17_22665 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LCH17_22670 PF04221 RelB antitoxin LCH17_22680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH17_22680 PF00672 HAMP domain