locus-tag	class	description
LCH17_00010	COG4695	Portal protein
LCH17_00090	COG4974	Belongs to the 'phage' integrase family
LCH17_00095	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LCH17_00100	COG0072	phenylalanine-tRNA ligase activity
LCH17_00100	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LCH17_00105	COG0776	regulation of translation
LCH17_00135	COG2199	diguanylate cyclase activity
LCH17_00140	COG1609	Transcriptional regulator
LCH17_00145	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LCH17_00150	COG1879	ABC-type sugar transport system periplasmic component
LCH17_00155	COG1172	Belongs to the binding-protein-dependent transport system permease family
LCH17_00160	COG1129	ABC transporter
LCH17_00165	COG1869	D-ribose catabolic process
LCH17_00185	COG0037	tRNA processing
LCH17_00190	COG0589	response to stress
LCH17_00195	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LCH17_00220	COG2010	Cytochrome c
LCH17_00235	COG3278	Belongs to the heme-copper respiratory oxidase family
LCH17_00245	COG1956	GAF domain-containing protein
LCH17_00250	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
LCH17_00260	COG0308	aminopeptidase N
LCH17_00270	COG2902	Dehydrogenase
LCH17_00275	COG0167	dihydroorotate dehydrogenase activity
LCH17_00285	COG0116	Belongs to the methyltransferase superfamily
LCH17_00285	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LCH17_00295	COG0488	(ABC) transporter
LCH17_00310	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LCH17_00315	COG1067	ATP-dependent peptidase activity
LCH17_00325	COG3141	response to X-ray
LCH17_00335	COG4221	oxidoreductase activity
LCH17_00380	COG0372	Belongs to the citrate synthase family
LCH17_00385	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
LCH17_00395	COG2995	paraquat-inducible protein a
LCH17_00400	COG3008	intermembrane lipid transfer
LCH17_00405	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LCH17_00405	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
LCH17_00420	COG0084	hydrolase, TatD family'
LCH17_00425	COG0470	DNA polymerase III
LCH17_00430	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LCH17_00435	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LCH17_00440	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LCH17_00450	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LCH17_00455	COG1028	Short-chain dehydrogenase reductase Sdr
LCH17_00465	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LCH17_00470	COG0416	fatty acid biosynthetic process
LCH17_00475	COG0333	Belongs to the bacterial ribosomal protein bL32 family
LCH17_00480	COG1399	metal-binding, possibly nucleic acid-binding protein
LCH17_00495	COG2814	Major facilitator Superfamily
LCH17_00500	COG0424	maF-like protein
LCH17_00505	COG0546	phosphoglycolate phosphatase activity
LCH17_00510	COG0564	pseudouridine synthase activity
LCH17_00515	COG1530	ribonuclease E activity
LCH17_00520	COG0306	phosphate transporter
LCH17_00525	COG0717	Belongs to the dCTP deaminase family
LCH17_00530	COG0572	uridine kinase
LCH17_00535	COG0489	protein tyrosine kinase activity
LCH17_00540	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LCH17_00540	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LCH17_00545	COG0625	glutathione transferase activity
LCH17_00550	COG1254	Belongs to the acylphosphatase family
LCH17_00560	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LCH17_00575	COG0709	Synthesizes selenophosphate from selenide and ATP
LCH17_00580	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
LCH17_00585	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LCH17_00590	COG3437	response regulator, receiver
LCH17_00600	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
LCH17_00610	COG1643	Atp-dependent helicase
LCH17_00615	COG0517	IMP dehydrogenase activity
LCH17_00615	COG0617	tRNA 3'-terminal CCA addition
LCH17_00615	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
LCH17_00630	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LCH17_00640	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LCH17_00645	COG2832	Protein of unknown function (DUF454)
LCH17_00650	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LCH17_00665	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
LCH17_00670	COG0318	PFAM AMP-dependent synthetase and ligase
LCH17_00675	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LCH17_00675	COG0596	Alpha beta hydrolase
LCH17_00675	COG2226	methyltransferase
LCH17_00685	COG1214	PFAM Peptidase M22, glycoprotease
LCH17_00690	COG1199	ATP-dependent helicase activity
LCH17_00700	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
LCH17_00705	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LCH17_00710	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LCH17_00715	COG0131	Imidazoleglycerol-phosphate dehydratase
LCH17_00715	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LCH17_00720	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LCH17_00725	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
LCH17_00730	COG3437	response regulator, receiver
LCH17_00735	COG2199	diguanylate cyclase activity
LCH17_00740	COG0784	Response regulator, receiver
LCH17_00740	COG2205	protein histidine kinase activity
LCH17_00740	COG2198	Histidine kinase
LCH17_00745	COG0107	imidazoleglycerol-phosphate synthase activity
LCH17_00750	COG0140	phosphoribosyl-ATP diphosphatase activity
LCH17_00750	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LCH17_00765	COG0318	PFAM AMP-dependent synthetase and ligase
LCH17_00770	COG1288	antiporter activity
LCH17_00780	COG3134	Outer membrane lipoprotein
LCH17_00790	COG2080	2 iron, 2 sulfur cluster binding
LCH17_00795	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
LCH17_00800	COG1529	Aldehyde oxidase and xanthine dehydrogenase
LCH17_00805	COG2252	PERMEase
LCH17_00810	COG0402	S-adenosylhomocysteine deaminase activity
LCH17_00815	COG2233	PERMEase
LCH17_00820	COG2080	2 iron, 2 sulfur cluster binding
LCH17_00820	COG1529	Aldehyde oxidase and xanthine dehydrogenase
LCH17_00825	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
LCH17_00830	COG0402	S-adenosylhomocysteine deaminase activity
LCH17_00835	COG0493	'glutamate synthase
LCH17_00835	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LCH17_00840	COG2068	MobA-Related Protein
LCH17_00845	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LCH17_00850	COG3608	succinylglutamate desuccinylase aspartoacylase
LCH17_00850	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
LCH17_00855	COG0697	spore germination
LCH17_00860	COG0549	Belongs to the carbamate kinase family
LCH17_00870	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LCH17_00875	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LCH17_00880	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LCH17_00885	COG3829	transcription factor binding
LCH17_00905	COG1024	Enoyl-CoA hydratase
LCH17_00905	COG1250	3-hydroxyacyl-CoA dehydrogenase
LCH17_00910	COG0183	Belongs to the thiolase family
LCH17_00915	COG0714	Associated with various cellular activities
LCH17_00945	COG1595	DNA-templated transcription, initiation
LCH17_00960	COG2067	long-chain fatty acid transport protein
LCH17_00965	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
LCH17_00985	COG3123	guanosine phosphorylase activity
LCH17_00990	COG1760	l-serine dehydratase
LCH17_00995	COG1760	l-serine dehydratase
LCH17_01000	COG2951	lytic endotransglycosylase activity
LCH17_01005	COG3100	YcgL domain-containing protein
LCH17_01010	COG0850	regulation of cytokinetic process
LCH17_01015	COG2894	cell division
LCH17_01020	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
LCH17_01025	COG3099	Belongs to the UPF0263 family
LCH17_01030	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LCH17_01070	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LCH17_01075	COG0697	spore germination
LCH17_01080	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
LCH17_01085	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LCH17_01095	COG0307	riboflavin synthase, alpha
LCH17_01105	COG0534	Mate efflux family protein
LCH17_01135	COG0417	DNA replication proofreading
LCH17_01160	COG1560	Kdo2-lipid A biosynthetic process
LCH17_01165	COG1560	Kdo2-lipid A biosynthetic process
LCH17_01175	COG0583	DNA-binding transcription factor activity
LCH17_01185	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
LCH17_01190	COG0583	DNA-binding transcription factor activity
LCH17_01200	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
LCH17_01215	COG2723	6-phospho-beta-galactosidase activity
LCH17_01220	COG0583	DNA-binding transcription factor activity
LCH17_01225	COG5001	Diguanylate cyclase
LCH17_01225	COG3300	MHYT domain
LCH17_01245	COG0730	response to heat
LCH17_01255	COG1028	Short-chain dehydrogenase reductase Sdr
LCH17_01265	COG1024	Enoyl-CoA hydratase
LCH17_01270	COG1024	Enoyl-CoA hydratase
LCH17_01275	COG1960	acyl-CoA dehydrogenase activity
LCH17_01285	COG1960	acyl-CoA dehydrogenase activity
LCH17_01290	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
LCH17_01325	COG1584	GPR1 FUN34 yaaH family protein
LCH17_01340	COG1115	amino acid carrier protein
LCH17_01380	COG1024	Enoyl-CoA hydratase
LCH17_01395	COG3162	membrane
LCH17_01400	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LCH17_01510	COG4584	PFAM Integrase catalytic
LCH17_01515	COG1484	DNA-dependent DNA replication
LCH17_01550	COG2916	Histone family protein nucleoid-structuring protein H-NS
LCH17_01560	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LCH17_01565	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LCH17_01715	COG1484	DNA-dependent DNA replication
LCH17_01720	COG4584	PFAM Integrase catalytic
LCH17_01725	COG0582	viral genome integration into host DNA
LCH17_01730	COG0488	(ABC) transporter
LCH17_01735	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LCH17_01740	COG0776	regulation of translation
LCH17_01745	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LCH17_01750	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LCH17_01755	COG0740	serine-type endopeptidase activity
LCH17_01760	COG0544	peptidyl-prolyl cis-trans isomerase activity
LCH17_01770	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
LCH17_01775	COG4591	ABC-type transport system involved in lipoprotein release permease component
LCH17_01780	COG1136	(ABC) transporter
LCH17_01785	COG4591	ABC-type transport system involved in lipoprotein release permease component
LCH17_01795	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LCH17_01800	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
LCH17_01805	COG4166	transmembrane transport
LCH17_01810	COG0697	spore germination
LCH17_01820	COG2062	phosphohistidine phosphatase, SixA
LCH17_01845	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LCH17_01845	COG2169	Transcriptional regulator
LCH17_01860	COG0519	Catalyzes the synthesis of GMP from XMP
LCH17_01860	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LCH17_01865	COG0517	IMP dehydrogenase activity
LCH17_01865	COG0516	GMP reductase activity
LCH17_01870	COG3158	transport of potassium into the cell
LCH17_01890	COG0697	spore germination
LCH17_01895	COG1570	exodeoxyribonuclease VII activity
LCH17_01910	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LCH17_01915	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
LCH17_01920	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
LCH17_01960	COG4771	TonB-dependent receptor
LCH17_01965	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LCH17_01970	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LCH17_01975	COG1120	ATPase activity
LCH17_01985	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LCH17_01990	COG0318	PFAM AMP-dependent synthetase and ligase
LCH17_01990	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LCH17_01990	COG1028	Short-chain dehydrogenase reductase Sdr
LCH17_01990	COG3321	synthase
LCH17_01990	COG0300	oxidoreductase activity
LCH17_02000	COG1028	Short-chain dehydrogenase reductase Sdr
LCH17_02005	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LCH17_02010	COG1535	isochorismatase
LCH17_02010	COG3433	isochorismatase activity
LCH17_02015	COG1021	2,3-dihydroxybenzoate-AMP ligase
LCH17_02035	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LCH17_02040	COG5001	Diguanylate cyclase
LCH17_02040	COG3300	MHYT domain
LCH17_02055	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LCH17_02065	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
LCH17_02070	COG0563	adenylate kinase activity
LCH17_02075	COG0326	Molecular chaperone. Has ATPase activity
LCH17_02080	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LCH17_02105	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
LCH17_02115	COG3158	transport of potassium into the cell
LCH17_02120	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
LCH17_02125	COG0651	ATP synthesis coupled electron transport
LCH17_02130	COG0650	Formate hydrogenlyase subunit 4
LCH17_02135	COG3261	NADH dehydrogenase
LCH17_02135	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
LCH17_02140	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LCH17_02145	COG3260	NADH ubiquinone oxidoreductase 20
LCH17_02155	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
LCH17_02165	COG1921	L-seryl-tRNASec selenium transferase activity
LCH17_02175	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
LCH17_02180	COG0298	carbon dioxide binding
LCH17_02190	COG0309	Hydrogenase expression formation protein (HypE)
LCH17_02195	COG0375	protein maturation
LCH17_02205	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
LCH17_02210	COG3842	ATPase activity
LCH17_02215	COG0444	Belongs to the ABC transporter superfamily
LCH17_02220	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LCH17_02235	COG1773	rubredoxin
LCH17_02240	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
LCH17_02245	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
LCH17_02250	COG5557	Pfam Polysulphide reductase, NrfD
LCH17_02255	COG0437	4 iron, 4 sulfur cluster binding
LCH17_02260	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
LCH17_02265	COG0745	RESPONSE REGULATOR receiver
LCH17_02275	COG0643	Histidine kinase
LCH17_02275	COG2198	Histidine kinase
LCH17_02280	COG0840	transmembrane signaling receptor activity
LCH17_02285	COG0835	chemotaxis
LCH17_02295	COG2201	protein-glutamate methylesterase activity
LCH17_02305	COG0840	transmembrane signaling receptor activity
LCH17_02310	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LCH17_02330	COG0659	secondary active sulfate transmembrane transporter activity
LCH17_02360	COG0672	)-iron permease
LCH17_02380	COG2814	Major facilitator Superfamily
LCH17_02390	COG1136	(ABC) transporter
LCH17_02395	COG0577	efflux transmembrane transporter activity
LCH17_02430	COG1139	Iron-sulfur cluster binding protein
LCH17_02440	COG1620	l-lactate permease
LCH17_02445	COG0583	DNA-binding transcription factor activity
LCH17_02455	COG0346	lactoylglutathione lyase activity
LCH17_02460	COG0596	Alpha beta hydrolase
LCH17_02480	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LCH17_02485	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
LCH17_02485	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
LCH17_02490	COG0527	aspartate kinase activity
LCH17_02500	COG1368	sulfuric ester hydrolase activity
LCH17_02505	COG1619	proteins homologs of microcin C7 resistance protein MccF
LCH17_02510	COG4667	esterase of the alpha-beta hydrolase superfamily
LCH17_02530	COG1648	precorrin-2 dehydrogenase activity
LCH17_02530	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LCH17_02540	COG0393	Putative heavy-metal-binding
LCH17_02560	COG1252	NADH dehydrogenase
LCH17_02565	COG3150	esterase
LCH17_02570	COG2233	PERMEase
LCH17_02585	COG2354	Protein conserved in bacteria
LCH17_02595	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LCH17_02600	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LCH17_02635	COG0537	adenosine 5'-monophosphoramidase activity
LCH17_02650	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
LCH17_02665	COG1301	dicarboxylic acid transport
LCH17_02675	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LCH17_02680	COG0861	Integral membrane protein TerC family
LCH17_02695	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LCH17_02700	COG0601	transmembrane transport
LCH17_02710	COG2095	MarC family integral membrane protein
LCH17_02720	COG1012	belongs to the aldehyde dehydrogenase family
LCH17_02720	COG1454	alcohol dehydrogenase
LCH17_02725	COG2199	diguanylate cyclase activity
LCH17_02725	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
LCH17_02730	COG3275	phosphorelay sensor kinase activity
LCH17_02735	COG3279	Response regulator of the LytR AlgR family
LCH17_02740	COG1966	Carbon starvation protein
LCH17_02750	COG1566	PFAM secretion protein HlyD family protein
LCH17_02755	COG1061	Type III restriction enzyme res subunit
LCH17_02760	COG2027	D-alanyl-D-alanine carboxypeptidase
LCH17_02765	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LCH17_02775	COG0436	Aminotransferase
LCH17_02780	COG1288	antiporter activity
LCH17_02785	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
LCH17_02835	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LCH17_02875	COG4397	Mu-like prophage major head subunit gpT
LCH17_02880	COG4388	Caudovirus prohead serine protease
LCH17_02910	COG4383	Mu-like prophage protein gp29
LCH17_02915	COG4373	Mu-like prophage FluMu protein gp28
LCH17_02925	COG0640	Transcriptional regulator
LCH17_03035	COG2932	Transcriptional regulator
LCH17_03055	COG0697	spore germination
LCH17_03060	COG4657	Part of a membrane complex involved in electron transport
LCH17_03065	COG2878	Part of a membrane complex involved in electron transport
LCH17_03075	COG4658	electron transport chain
LCH17_03080	COG4659	FMN binding
LCH17_03085	COG4660	Part of a membrane complex involved in electron transport
LCH17_03090	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LCH17_03095	COG0346	lactoylglutathione lyase activity
LCH17_03110	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LCH17_03115	COG2056	Na+-H+ antiporter family
LCH17_03125	COG2050	protein possibly involved in aromatic compounds catabolism
LCH17_03135	COG0247	lactate metabolic process
LCH17_03135	COG0277	FAD linked oxidase domain protein
LCH17_03145	COG1253	flavin adenine dinucleotide binding
LCH17_03150	COG1902	pentaerythritol trinitrate reductase activity
LCH17_03155	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LCH17_03160	COG0647	UMP catabolic process
LCH17_03165	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LCH17_03165	COG4651	solute:proton antiporter activity
LCH17_03175	COG0367	asparagine synthase
LCH17_03185	COG0625	glutathione transferase activity
LCH17_03190	COG0625	glutathione transferase activity
LCH17_03200	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
LCH17_03215	COG0564	pseudouridine synthase activity
LCH17_03220	COG2203	Gaf domain
LCH17_03220	COG2199	diguanylate cyclase activity
LCH17_03225	COG0840	transmembrane signaling receptor activity
LCH17_03235	COG0392	lysyltransferase activity
LCH17_03235	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LCH17_03240	COG2194	sulfuric ester hydrolase activity
LCH17_03260	COG0670	Belongs to the BI1 family
LCH17_03265	COG1289	transmembrane transporter activity
LCH17_03270	COG2920	part of a sulfur-relay system
LCH17_03275	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
LCH17_03280	COG0285	dihydrofolate synthase activity
LCH17_03285	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LCH17_03290	COG0101	tRNA pseudouridine synthase activity
LCH17_03300	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LCH17_03305	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LCH17_03310	COG0671	phosphoesterase, PA-phosphatase related
LCH17_03315	COG1464	Belongs to the NlpA lipoprotein family
LCH17_03345	COG0574	Belongs to the PEP-utilizing enzyme family
LCH17_03345	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LCH17_03350	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
LCH17_03410	COG1242	4 iron, 4 sulfur cluster binding
LCH17_03415	COG0067	glutamate synthase
LCH17_03415	COG0069	glutamate synthase activity
LCH17_03415	COG0070	glutamate synthase
LCH17_03420	COG0493	'glutamate synthase
LCH17_03425	COG1126	abc transporter atp-binding protein
LCH17_03430	COG0765	amino acid transport
LCH17_03435	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LCH17_03450	COG0789	Transcriptional regulator
LCH17_03465	COG4104	PAAR repeat-containing protein
LCH17_03475	COG0513	Belongs to the DEAD box helicase family
LCH17_03480	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LCH17_03510	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LCH17_03515	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
LCH17_03520	COG0505	Belongs to the CarA family
LCH17_03525	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
LCH17_03535	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LCH17_03540	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LCH17_03545	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LCH17_03550	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
LCH17_03555	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LCH17_03565	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
LCH17_03575	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LCH17_03575	COG2205	protein histidine kinase activity
LCH17_03590	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LCH17_03615	COG0023	Translation Initiation Factor
LCH17_03620	COG2119	membrane
LCH17_03650	COG2203	Gaf domain
LCH17_03650	COG2199	diguanylate cyclase activity
LCH17_03665	COG1204	response to ionizing radiation
LCH17_03675	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LCH17_03685	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LCH17_03690	COG3301	Polysulphide reductase, NrfD
LCH17_03695	COG0437	4 iron, 4 sulfur cluster binding
LCH17_03700	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
LCH17_03755	COG0322	excinuclease ABC activity
LCH17_03760	COG2197	response regulator
LCH17_03765	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
LCH17_03770	COG2835	tetraacyldisaccharide 4'-kinase activity
LCH17_03775	COG1663	tetraacyldisaccharide 4'-kinase activity
LCH17_03780	COG1132	(ABC) transporter
LCH17_03785	COG0658	competence protein
LCH17_03785	COG2333	competence protein COMEC
LCH17_03800	COG0433	COG0433 Predicted ATPase
LCH17_03805	COG1448	Aminotransferase
LCH17_03820	COG1199	ATP-dependent helicase activity
LCH17_03830	COG0123	including yeast histone deacetylase and acetoin utilization protein
LCH17_03835	COG0477	Major facilitator Superfamily
LCH17_03840	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LCH17_03865	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LCH17_03880	COG2271	Major facilitator Superfamily
LCH17_03885	COG3706	GGDEF domain
LCH17_03890	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LCH17_03895	COG0765	amino acid transport
LCH17_03900	COG1126	abc transporter atp-binding protein
LCH17_03920	COG0531	amino acid
LCH17_03935	COG1253	flavin adenine dinucleotide binding
LCH17_03940	COG0704	Plays a role in the regulation of phosphate uptake
LCH17_03945	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
LCH17_03950	COG0581	inorganic phosphate transmembrane transporter activity
LCH17_03955	COG0573	inorganic phosphate transmembrane transporter activity
LCH17_03960	COG0590	tRNA wobble adenosine to inosine editing
LCH17_03975	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LCH17_03995	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LCH17_04000	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
LCH17_04005	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LCH17_04010	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LCH17_04035	COG2716	regulation of RNA biosynthetic process
LCH17_04040	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LCH17_04050	COG2239	Acts as a magnesium transporter
LCH17_04065	COG3951	Flagellar rod assembly protein muramidase FlgJ
LCH17_04065	COG1705	Flagellar rod assembly protein muramidase FlgJ
LCH17_04070	COG1706	bacterial-type flagellum-dependent cell motility
LCH17_04075	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
LCH17_04085	COG4787	bacterial-type flagellum-dependent cell motility
LCH17_04105	COG1815	bacterial-type flagellum-dependent cell motility
LCH17_04110	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LCH17_04115	COG0835	chemotaxis
LCH17_04115	COG0784	Response regulator, receiver
LCH17_04120	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
LCH17_04135	COG0622	Phosphoesterase
LCH17_04165	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LCH17_04170	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LCH17_04175	COG1882	Formate acetyltransferase
LCH17_04180	COG1349	DNA-binding transcription factor activity
LCH17_04185	COG0697	spore germination
LCH17_04215	COG1278	Cold shock
LCH17_04255	COG3132	Protein of unknown function, DUF480
LCH17_04265	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LCH17_04285	COG0489	protein tyrosine kinase activity
LCH17_04285	COG3206	protein involved in exopolysaccharide biosynthesis
LCH17_04295	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
LCH17_04310	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LCH17_04335	COG1086	Polysaccharide biosynthesis protein
LCH17_04395	COG1091	dTDP-4-dehydrorhamnose reductase activity
LCH17_04410	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LCH17_04415	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LCH17_04420	COG1309	transcriptional regulator
LCH17_04435	COG1946	Acyl-CoA thioesterase
LCH17_04445	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LCH17_04455	COG0009	L-threonylcarbamoyladenylate synthase
LCH17_04465	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LCH17_04470	COG0512	Glutamine amidotransferase of anthranilate synthase
LCH17_04470	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LCH17_04475	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LCH17_04480	COG0135	phosphoribosylanthranilate isomerase activity
LCH17_04480	COG0134	indole-3-glycerol-phosphate synthase activity
LCH17_04485	COG0133	tryptophan synthase activity
LCH17_04490	COG0159	tryptophan synthase activity
LCH17_04505	COG1988	membrane-bound metal-dependent
LCH17_04525	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LCH17_04535	COG4521	taurine ABC transporter
LCH17_04540	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
LCH17_04545	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LCH17_04550	COG2175	clavaminate synthase activity
LCH17_04560	COG2814	Major facilitator Superfamily
LCH17_04565	COG0109	protoheme IX farnesyltransferase activity
LCH17_04570	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
LCH17_04575	COG1845	cytochrome c oxidase, subunit III
LCH17_04580	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LCH17_04585	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LCH17_04630	COG2211	Major facilitator Superfamily
LCH17_04645	COG0708	Exodeoxyribonuclease III
LCH17_04665	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LCH17_04670	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LCH17_04690	COG0095	Lipoate-protein ligase
LCH17_04730	COG0446	pyridine nucleotide-disulphide oxidoreductase
LCH17_04740	COG1285	pathogenesis
LCH17_04745	COG0484	heat shock protein binding
LCH17_04750	COG0443	Heat shock 70 kDa protein
LCH17_04755	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LCH17_04760	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LCH17_04765	COG0497	DNA recombination
LCH17_04770	COG1227	inorganic diphosphatase activity
LCH17_04780	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LCH17_04785	COG1136	(ABC) transporter
LCH17_04785	COG0577	efflux transmembrane transporter activity
LCH17_04795	COG2375	cellular response to nickel ion
LCH17_04800	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LCH17_04825	COG3152	Membrane
LCH17_04845	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LCH17_04850	COG1396	sequence-specific DNA binding
LCH17_04850	COG1917	Cupin 2, conserved barrel domain protein
LCH17_04865	COG0531	amino acid
LCH17_04875	COG0531	amino acid
LCH17_04885	COG1283	sodium-dependent phosphate transmembrane transporter activity
LCH17_04895	COG3384	dioxygenase
LCH17_04900	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LCH17_04900	COG2205	protein histidine kinase activity
LCH17_04915	COG0813	purine-nucleoside phosphorylase activity
LCH17_04950	COG4319	ketosteroid isomerase
LCH17_04955	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
LCH17_04960	COG0083	homoserine kinase activity
LCH17_04970	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
LCH17_04975	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
LCH17_04990	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LCH17_05000	COG0745	RESPONSE REGULATOR receiver
LCH17_05015	COG4988	ABC transporter
LCH17_05020	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LCH17_05040	COG1720	tRNA m6t6A37 methyltransferase activity
LCH17_05055	COG0542	response to heat
LCH17_05060	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LCH17_05065	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LCH17_05075	COG2190	(PTS) system
LCH17_05090	COG3038	cytochrome b561
LCH17_05100	COG0420	3'-5' exonuclease activity
LCH17_05110	COG2974	May be involved in recombination
LCH17_05120	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LCH17_05120	COG4651	solute:proton antiporter activity
LCH17_05135	COG0469	pyruvate kinase activity
LCH17_05140	COG3264	Mechanosensitive ion channel
LCH17_05140	COG1196	nuclear chromosome segregation
LCH17_05150	COG2706	6-phosphogluconolactonase activity
LCH17_05160	COG0281	malic enzyme
LCH17_05175	COG0437	4 iron, 4 sulfur cluster binding
LCH17_05180	COG3383	formate dehydrogenase (NAD+) activity
LCH17_05180	COG3383	formate dehydrogenase (NAD+) activity
LCH17_05215	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LCH17_05220	COG1910	domain protein
LCH17_05225	COG3852	Histidine kinase
LCH17_05230	COG2204	response regulator
LCH17_05240	COG4662	Binding-protein-dependent transport system inner membrane component
LCH17_05250	COG0746	molybdenum cofactor guanylyltransferase activity
LCH17_05255	COG0303	'Molybdopterin
LCH17_05260	COG1289	transmembrane transporter activity
LCH17_05295	COG3220	belongs to the UPF0276 family
LCH17_05325	COG0784	Response regulator, receiver
LCH17_05325	COG2205	protein histidine kinase activity
LCH17_05330	COG4166	transmembrane transport
LCH17_05335	COG0601	transmembrane transport
LCH17_05340	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LCH17_05345	COG0444	Belongs to the ABC transporter superfamily
LCH17_05350	COG4608	Belongs to the ABC transporter superfamily
LCH17_05360	COG2971	BadF BadG BcrA BcrD
LCH17_05370	COG0840	transmembrane signaling receptor activity
LCH17_05390	COG3724	N-succinylarginine dihydrolase activity
LCH17_05395	COG0616	signal peptide processing
LCH17_05400	COG1028	Short-chain dehydrogenase reductase Sdr
LCH17_05405	COG0583	DNA-binding transcription factor activity
LCH17_05415	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
LCH17_05425	COG0583	DNA-binding transcription factor activity
LCH17_05430	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LCH17_05435	COG1881	PFAM PEBP family protein
LCH17_05445	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
LCH17_05445	COG3408	Glycogen debranching enzyme
LCH17_05450	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LCH17_05455	COG0739	heme binding
LCH17_05460	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
LCH17_05480	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LCH17_05490	COG3091	SprT-like family
LCH17_05500	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LCH17_05505	COG0189	ligase activity
LCH17_05515	COG1678	Uncharacterized ACR, COG1678
LCH17_05520	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LCH17_05525	COG3104	oligopeptide transport
LCH17_05555	COG0714	Associated with various cellular activities
LCH17_05570	COG1115	amino acid carrier protein
LCH17_05575	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LCH17_05590	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LCH17_05600	COG1301	dicarboxylic acid transport
LCH17_05605	COG2877	3-deoxy-8-phosphooctulonate synthase activity
LCH17_05610	COG2912	Transglutaminase-like superfamily
LCH17_05620	COG2890	protein-(glutamine-N5) methyltransferase activity
LCH17_05625	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LCH17_05630	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
LCH17_05635	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
LCH17_05640	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
LCH17_05650	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LCH17_05655	COG0737	Belongs to the 5'-nucleotidase family
LCH17_05660	COG0193	aminoacyl-tRNA hydrolase activity
LCH17_05665	COG0012	GTP binding
LCH17_05710	COG0471	metal ion transport
LCH17_05710	COG0490	domain, Protein
LCH17_05720	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
LCH17_05730	COG3097	Belongs to the UPF0267 family
LCH17_05740	COG0366	Alpha amylase catalytic
LCH17_05755	COG0488	(ABC) transporter
LCH17_05765	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LCH17_05765	COG0674	pyruvate-flavodoxin oxidoreductase activity
LCH17_05765	COG1013	pyruvate-flavodoxin oxidoreductase activity
LCH17_05765	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
LCH17_05775	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LCH17_05785	COG1012	belongs to the aldehyde dehydrogenase family
LCH17_05795	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LCH17_05810	COG0180	Tryptophanyl-tRNA synthetase
LCH17_05820	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LCH17_05825	COG0338	D12 class N6 adenine-specific DNA methyltransferase
LCH17_05835	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
LCH17_05840	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LCH17_05870	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
LCH17_05875	COG0583	DNA-binding transcription factor activity
LCH17_05895	COG0583	DNA-binding transcription factor activity
LCH17_05910	COG0739	heme binding
LCH17_05920	COG1511	domain protein
LCH17_05920	COG3264	Mechanosensitive ion channel
LCH17_05925	COG0584	glycerophosphoryl diester phosphodiesterase
LCH17_05935	COG1053	succinate dehydrogenase
LCH17_05940	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LCH17_05945	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
LCH17_05970	COG3214	Protein conserved in bacteria
LCH17_06010	COG0642	Histidine kinase
LCH17_06020	COG0516	GMP reductase activity
LCH17_06030	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LCH17_06035	COG3647	Membrane
LCH17_06045	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LCH17_06065	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LCH17_06080	COG3706	GGDEF domain
LCH17_06090	COG1335	isochorismatase
LCH17_06095	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LCH17_06100	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LCH17_06105	COG1702	phosphate starvation-inducible protein PhoH
LCH17_06110	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LCH17_06115	COG4535	Mg2 and Co2 transporter CorC
LCH17_06120	COG0815	Transfers the fatty acyl group on membrane lipoproteins
LCH17_06125	COG2888	peptidyl-tyrosine sulfation
LCH17_06130	COG0495	leucyl-tRNA aminoacylation
LCH17_06145	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LCH17_06150	COG0799	negative regulation of ribosome biogenesis
LCH17_06155	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LCH17_06160	COG0768	penicillin binding
LCH17_06165	COG0772	Belongs to the SEDS family
LCH17_06170	COG2951	lytic endotransglycosylase activity
LCH17_06175	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LCH17_06180	COG1686	Belongs to the peptidase S11 family
LCH17_06185	COG2921	Belongs to the UPF0250 family
LCH17_06190	COG0321	lipoyl(octanoyl) transferase activity
LCH17_06195	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
LCH17_06205	COG3545	Serine hydrolase
LCH17_06210	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LCH17_06225	COG0789	Transcriptional regulator
LCH17_06235	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LCH17_06240	COG1970	mechanosensitive ion channel activity
LCH17_06245	COG4974	Belongs to the 'phage' integrase family
LCH17_06255	COG0312	modulator of DNA gyrase
LCH17_06260	COG0312	modulator of DNA gyrase
LCH17_06325	COG3275	phosphorelay sensor kinase activity
LCH17_06330	COG3279	Response regulator of the LytR AlgR family
LCH17_06335	COG1966	Carbon starvation protein
LCH17_06345	COG0114	fumarate hydratase activity
LCH17_06355	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
LCH17_06365	COG2211	Major facilitator Superfamily
LCH17_06370	COG1185	polyribonucleotide nucleotidyltransferase activity
LCH17_06375	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LCH17_06380	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LCH17_06385	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LCH17_06390	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LCH17_06395	COG0195	Participates in both transcription termination and antitermination
LCH17_06400	COG0779	Required for maturation of 30S ribosomal subunits
LCH17_06415	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LCH17_06420	COG0149	triose-phosphate isomerase activity
LCH17_06425	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LCH17_06430	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LCH17_06440	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
LCH17_06445	COG1534	Rna-binding protein
LCH17_06460	COG1360	Flagellar Motor Protein
LCH17_06465	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LCH17_06470	COG1722	exodeoxyribonuclease VII activity
LCH17_06475	COG0142	geranyltranstransferase activity
LCH17_06480	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LCH17_06490	COG0601	transmembrane transport
LCH17_06500	COG4172	Belongs to the ABC transporter superfamily
LCH17_06505	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LCH17_06510	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
LCH17_06515	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LCH17_06520	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
LCH17_06540	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LCH17_06540	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LCH17_06545	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LCH17_06555	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LCH17_06570	COG3381	protein complex oligomerization
LCH17_06590	COG3300	MHYT domain
LCH17_06590	COG5001	Diguanylate cyclase
LCH17_06600	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LCH17_06605	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
LCH17_06610	COG0511	ligase activity, forming carbon-carbon bonds
LCH17_06615	COG0439	Biotin carboxylase
LCH17_06625	COG4145	pantothenate transmembrane transporter activity
LCH17_06630	COG1263	PTS System
LCH17_06630	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LCH17_06630	COG2190	(PTS) system
LCH17_06635	COG0583	DNA-binding transcription factor activity
LCH17_06640	COG0604	alcohol dehydrogenase
LCH17_06645	COG2264	protein methyltransferase activity
LCH17_06670	COG0778	Nitroreductase
LCH17_06675	COG0446	pyridine nucleotide-disulphide oxidoreductase
LCH17_06675	COG1902	pentaerythritol trinitrate reductase activity
LCH17_06680	COG0616	signal peptide processing
LCH17_06700	COG3139	Protein of unknown function (DUF1315)
LCH17_06705	COG0252	asparaginase activity
LCH17_06710	COG0786	glutamate:sodium symporter activity
LCH17_06725	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
LCH17_06730	COG0384	phenazine biosynthesis protein PhzF
LCH17_06735	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LCH17_06740	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LCH17_06745	COG0175	sulfate reduction
LCH17_06750	COG2113	Glycine betaine
LCH17_06755	COG4176	ABC-type proline glycine betaine transport system permease component
LCH17_06760	COG4175	Glycine betaine
LCH17_06770	COG3610	response to peptide
LCH17_06775	COG2966	Psort location CytoplasmicMembrane, score
LCH17_06785	COG0521	Mo-molybdopterin cofactor biosynthetic process
LCH17_06795	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LCH17_06800	COG1028	Short-chain dehydrogenase reductase Sdr
LCH17_06860	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LCH17_06865	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LCH17_06900	COG1858	cytochrome C peroxidase
LCH17_06910	COG2313	pseudouridylate synthase activity
LCH17_06915	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LCH17_06950	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LCH17_06965	COG1073	alpha beta
LCH17_06970	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
LCH17_06975	COG2195	Cleaves the N-terminal amino acid of tripeptides
LCH17_06980	COG4608	Belongs to the ABC transporter superfamily
LCH17_06985	COG0444	Belongs to the ABC transporter superfamily
LCH17_06995	COG4239	(ABC) transporter, permease
LCH17_07000	COG4174	ABC transporter (Permease)
LCH17_07015	COG0811	peptide transport
LCH17_07020	COG0811	peptide transport
LCH17_07025	COG0848	biopolymer transport protein
LCH17_07075	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LCH17_07080	COG0840	transmembrane signaling receptor activity
LCH17_07090	COG1278	Cold shock
LCH17_07130	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
LCH17_07135	COG1162	GTPase activity
LCH17_07140	COG0688	phosphatidylethanolamine metabolic process
LCH17_07145	COG4628	conserved protein (DUF2132)
LCH17_07160	COG3059	membrane
LCH17_07165	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LCH17_07170	COG2207	Transcriptional regulator
LCH17_07180	COG3300	MHYT domain
LCH17_07180	COG5001	Diguanylate cyclase
LCH17_07185	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
LCH17_07210	COG1132	(ABC) transporter
LCH17_07220	COG2897	thiosulfate sulfurtransferase activity
LCH17_07225	COG2066	Belongs to the glutaminase family
LCH17_07230	COG3171	Protein conserved in bacteria
LCH17_07235	COG0220	tRNA (guanine-N7-)-methyltransferase activity
LCH17_07240	COG2234	aminopeptidase activity
LCH17_07240	COG4935	Belongs to the peptidase S8 family
LCH17_07245	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LCH17_07250	COG2200	EAL domain
LCH17_07255	COG1090	epimerase
LCH17_07260	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
LCH17_07265	COG4181	ATPase activity
LCH17_07270	COG2755	lipolytic protein G-D-S-L family
LCH17_07275	COG0784	Response regulator, receiver
LCH17_07275	COG0835	chemotaxis
LCH17_07285	COG0569	domain protein
LCH17_07285	COG2985	domain, Protein
LCH17_07290	COG1272	protein, Hemolysin III
LCH17_07295	COG0076	glutamate decarboxylase activity
LCH17_07300	COG2917	probably involved in intracellular septation
LCH17_07305	COG2350	Protein conserved in bacteria
LCH17_07315	COG1555	photosystem II stabilization
LCH17_07320	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LCH17_07325	COG3104	oligopeptide transport
LCH17_07330	COG0745	RESPONSE REGULATOR receiver
LCH17_07360	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LCH17_07375	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
LCH17_07380	COG1280	lysine exporter protein (LysE YggA)
LCH17_07405	COG0316	Belongs to the HesB IscA family
LCH17_07415	COG0038	chloride channel
LCH17_07420	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
LCH17_07435	COG0671	phosphoesterase, PA-phosphatase related
LCH17_07445	COG0784	Response regulator, receiver
LCH17_07445	COG3437	response regulator, receiver
LCH17_07455	COG2076	Multidrug Resistance protein
LCH17_07465	COG0346	lactoylglutathione lyase activity
LCH17_07470	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LCH17_07475	COG1643	Atp-dependent helicase
LCH17_07485	COG1489	DNA binding
LCH17_07490	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
LCH17_07495	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LCH17_07510	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
LCH17_07515	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
LCH17_07535	COG1924	4 iron, 4 sulfur cluster binding
LCH17_07540	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
LCH17_07545	COG0842	Transport permease protein
LCH17_07550	COG1131	(ABC) transporter
LCH17_07565	COG0163	prenyltransferase activity
LCH17_07570	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LCH17_07575	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
LCH17_07590	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
LCH17_07605	COG1136	(ABC) transporter
LCH17_07650	COG0529	Catalyzes the synthesis of activated sulfate
LCH17_07655	COG0471	metal ion transport
LCH17_07655	COG3273	potassium ion transport
LCH17_07660	COG2895	sulfate adenylyltransferase (ATP) activity
LCH17_07665	COG0175	sulfate reduction
LCH17_07670	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LCH17_07670	COG1648	precorrin-2 dehydrogenase activity
LCH17_07675	COG0330	HflC and HflK could
LCH17_07680	COG1585	Membrane protein implicated in regulation of membrane protease activity
LCH17_07685	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
LCH17_07685	COG0517	IMP dehydrogenase activity
LCH17_07690	COG0488	(ABC) transporter
LCH17_07700	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
LCH17_07705	COG0583	DNA-binding transcription factor activity
LCH17_07740	COG0789	Transcriptional regulator
LCH17_07750	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LCH17_07760	COG0668	transmembrane transport
LCH17_07770	COG2731	YhcH YjgK YiaL family protein
LCH17_07785	COG1794	racemase activity, acting on amino acids and derivatives
LCH17_07800	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LCH17_07825	COG0733	neurotransmitter:sodium symporter activity
LCH17_07835	COG0733	neurotransmitter:sodium symporter activity
LCH17_07850	COG0561	phosphatase activity
LCH17_07885	COG1846	Transcriptional regulator
LCH17_07890	COG1764	response to oxidative stress
LCH17_07895	COG2130	NADP-dependent
LCH17_07900	COG1051	belongs to the nudix hydrolase family
LCH17_07920	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LCH17_07925	COG1640	4-alpha-glucanotransferase
LCH17_07930	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LCH17_07935	COG0676	glucose-6-phosphate 1-epimerase activity
LCH17_07940	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
LCH17_07945	COG0840	transmembrane signaling receptor activity
LCH17_08020	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
LCH17_08025	COG2885	chlorophyll binding
LCH17_08030	COG0823	Involved in the tonB-independent uptake of proteins
LCH17_08045	COG0811	peptide transport
LCH17_08050	COG0824	Thioesterase
LCH17_08055	COG3790	cyd operon protein YbgE
LCH17_08060	COG4890	Cyd operon protein YbgT
LCH17_08065	COG1294	oxidase, subunit
LCH17_08070	COG1271	oxidase subunit
LCH17_08075	COG2255	four-way junction helicase activity
LCH17_08080	COG0632	four-way junction helicase activity
LCH17_08085	COG0840	transmembrane signaling receptor activity
LCH17_08090	COG0442	prolyl-tRNA aminoacylation
LCH17_08095	COG4221	oxidoreductase activity
LCH17_08110	COG1024	Enoyl-CoA hydratase
LCH17_08130	COG4166	transmembrane transport
LCH17_08145	COG1872	DUF167
LCH17_08150	COG0762	integral membrane protein
LCH17_08155	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LCH17_08160	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LCH17_08175	COG3022	response to hydroperoxide
LCH17_08180	COG0513	Belongs to the DEAD box helicase family
LCH17_08185	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
LCH17_08210	COG0735	belongs to the Fur family
LCH17_08215	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LCH17_08230	COG0776	regulation of translation
LCH17_08240	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
LCH17_08265	COG0560	Phosphoserine phosphatase
LCH17_08275	COG3447	MASE1 domain protein
LCH17_08275	COG5001	Diguanylate cyclase
LCH17_08275	COG5002	protein histidine kinase activity
LCH17_08280	COG0813	purine-nucleoside phosphorylase activity
LCH17_08285	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
LCH17_08290	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
LCH17_08295	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LCH17_08305	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LCH17_08310	COG0084	hydrolase, TatD family'
LCH17_08315	COG2165	general secretion pathway protein
LCH17_08325	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LCH17_08330	COG0004	ammonium transporteR
LCH17_08340	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
LCH17_08375	COG4584	PFAM Integrase catalytic
LCH17_08380	COG1484	DNA-dependent DNA replication
LCH17_08400	COG0582	viral genome integration into host DNA
LCH17_08415	COG0795	lipopolysaccharide-transporting ATPase activity
LCH17_08420	COG0795	lipopolysaccharide-transporting ATPase activity
LCH17_08425	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LCH17_08430	COG2927	DNA polymerase III (CHI subunit)
LCH17_08435	COG0525	valine-tRNA ligase activity
LCH17_08440	COG1253	flavin adenine dinucleotide binding
LCH17_08445	COG0586	Pfam SNARE associated Golgi protein
LCH17_08450	COG1686	Belongs to the peptidase S11 family
LCH17_08490	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
LCH17_08495	COG0527	aspartate kinase activity
LCH17_08500	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LCH17_08510	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LCH17_08515	COG1546	Belongs to the CinA family
LCH17_08520	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LCH17_08540	COG3068	Protein conserved in bacteria
LCH17_08550	COG0739	heme binding
LCH17_08570	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
LCH17_08575	COG1121	(ABC) transporter
LCH17_08580	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LCH17_08585	COG0583	DNA-binding transcription factor activity
LCH17_08590	COG0697	spore germination
LCH17_08595	COG1573	uracil-dna glycosylase
LCH17_08600	COG2962	Rard protein
LCH17_08610	COG2827	Endonuclease containing a URI domain
LCH17_08625	COG1842	Phage shock protein A
LCH17_08630	COG0204	Acyl-transferase
LCH17_08655	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LCH17_08710	COG1289	transmembrane transporter activity
LCH17_08715	COG1566	PFAM secretion protein HlyD family protein
LCH17_08730	COG1051	belongs to the nudix hydrolase family
LCH17_08735	COG3150	esterase
LCH17_08745	COG3151	Protein conserved in bacteria
LCH17_08750	COG0494	nUDIX hydrolase
LCH17_08755	COG1538	Outer membrane efflux protein
LCH17_08760	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
LCH17_08760	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
LCH17_08765	COG1560	Kdo2-lipid A biosynthetic process
LCH17_08780	COG1392	Phosphate transport regulator
LCH17_08785	COG0306	phosphate transporter
LCH17_08790	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LCH17_08820	COG0583	DNA-binding transcription factor activity
LCH17_08825	COG1380	Effector of murein hydrolase LrgA
LCH17_08830	COG1346	cytolysis
LCH17_08845	COG0617	tRNA 3'-terminal CCA addition
LCH17_08850	COG3267	Type II secretory pathway component ExeA
LCH17_08850	COG3409	Peptidoglycan-binding domain 1 protein
LCH17_08860	COG1194	a g-specific adenine glycosylase
LCH17_08865	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
LCH17_08875	COG3111	PFAM Bacterial OB fold (BOF) protein
LCH17_08880	COG3240	lipase activity
LCH17_08890	COG2885	chlorophyll binding
LCH17_08890	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
LCH17_08895	COG3009	Protein conserved in bacteria
LCH17_08900	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LCH17_08900	COG3008	intermembrane lipid transfer
LCH17_08905	COG2995	paraquat-inducible protein a
LCH17_08915	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LCH17_08925	COG5001	Diguanylate cyclase
LCH17_08925	COG2203	Gaf domain
LCH17_08925	COG4251	negative regulation of phosphorylation
LCH17_08925	COG3706	GGDEF domain
LCH17_08930	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LCH17_08935	COG2813	Specifically methylates the guanine in position
LCH17_08940	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LCH17_08945	COG0297	glycogen (starch) synthase activity
LCH17_08985	COG1757	Na H antiporter
LCH17_08990	COG0583	DNA-binding transcription factor activity
LCH17_08995	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
LCH17_09000	COG3842	ATPase activity
LCH17_09005	COG1176	ABC-type spermidine putrescine transport system, permease component I
LCH17_09010	COG1177	transmembrane transport
LCH17_09015	COG1012	belongs to the aldehyde dehydrogenase family
LCH17_09025	COG5006	permease, DMT superfamily
LCH17_09030	COG1522	sequence-specific DNA binding
LCH17_09035	COG0110	maltose O-acetyltransferase activity
LCH17_09040	COG0366	Alpha amylase catalytic
LCH17_09045	COG1263	PTS System
LCH17_09045	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LCH17_09065	COG0252	asparaginase activity
LCH17_09080	COG1803	Methylglyoxal synthase
LCH17_09105	COG1444	tRNA N-acetyltransferase activity
LCH17_09115	COG0835	chemotaxis
LCH17_09115	COG0784	Response regulator, receiver
LCH17_09160	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
LCH17_09165	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LCH17_09180	COG0477	Major facilitator Superfamily
LCH17_09185	COG0523	cobalamin synthesis protein
LCH17_09195	COG1280	lysine exporter protein (LysE YggA)
LCH17_09205	COG2200	EAL domain
LCH17_09210	COG1049	propionate catabolic process, 2-methylcitrate cycle
LCH17_09215	COG1752	Esterase of the alpha-beta hydrolase superfamily
LCH17_09220	COG0840	transmembrane signaling receptor activity
LCH17_09225	COG0840	transmembrane signaling receptor activity
LCH17_09235	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LCH17_09240	COG0508	dehydrogenase complex catalyzes the overall conversion of
LCH17_09245	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
LCH17_09250	COG2186	Transcriptional regulator
LCH17_09275	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LCH17_09280	COG1459	type II secretion system
LCH17_09295	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
LCH17_09300	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
LCH17_09305	COG0494	nUDIX hydrolase
LCH17_09315	COG0653	protein targeting
LCH17_09325	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
LCH17_09330	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LCH17_09335	COG0849	cell division
LCH17_09340	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
LCH17_09345	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LCH17_09350	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LCH17_09355	COG0772	Belongs to the SEDS family
LCH17_09360	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LCH17_09365	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LCH17_09370	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LCH17_09380	COG0768	penicillin binding
LCH17_09385	COG3116	cell division
LCH17_09390	COG0275	rRNA processing
LCH17_09395	COG2001	Belongs to the MraZ family
LCH17_09405	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LCH17_09410	COG3107	peptidoglycan biosynthetic process
LCH17_09415	COG0792	nuclease activity
LCH17_09420	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
LCH17_09425	COG2823	Periplasmic or secreted lipoprotein
LCH17_09430	COG2969	positive regulation of protein catabolic process
LCH17_09435	COG0625	glutathione transferase activity
LCH17_09440	COG2857	Cytochrome c1
LCH17_09445	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
LCH17_09450	COG0723	plastoquinol--plastocyanin reductase activity
LCH17_09455	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LCH17_09460	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LCH17_09465	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
LCH17_09475	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LCH17_09480	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LCH17_09510	COG3964	amidohydrolase
LCH17_09525	COG3711	transcriptional antiterminator
LCH17_09525	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LCH17_09530	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LCH17_09535	COG1660	Displays ATPase and GTPase activities
LCH17_09540	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LCH17_09550	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
LCH17_09555	COG1137	ATPase activity
LCH17_09560	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
LCH17_09565	COG3117	lipopolysaccharide transmembrane transporter activity
LCH17_09570	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
LCH17_09575	COG0517	IMP dehydrogenase activity
LCH17_09575	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
LCH17_09580	COG1127	ABC transporter
LCH17_09585	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LCH17_09590	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LCH17_09595	COG2854	intermembrane phospholipid transfer
LCH17_09605	COG5007	Belongs to the BolA IbaG family
LCH17_09610	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LCH17_09615	COG0312	modulator of DNA gyrase
LCH17_09620	COG3028	Belongs to the UPF0307 family
LCH17_09630	COG2926	Belongs to the UPF0265 family
LCH17_09660	COG1396	sequence-specific DNA binding
LCH17_09665	COG3135	benzoate transporter
LCH17_09690	COG0840	transmembrane signaling receptor activity
LCH17_09695	COG3047	cAMP biosynthetic process
LCH17_09705	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LCH17_09710	COG2197	response regulator
LCH17_09715	COG0629	single-stranded DNA binding
LCH17_09735	COG1278	Cold shock
LCH17_09740	COG4771	TonB-dependent receptor
LCH17_09745	COG3706	GGDEF domain
LCH17_09785	COG0346	lactoylglutathione lyase activity
LCH17_09795	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LCH17_09800	COG1074	ATP-dependent DNA helicase activity
LCH17_09805	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
LCH17_09810	COG2259	Doxx family
LCH17_09815	COG1741	Belongs to the pirin family
LCH17_09825	COG0583	DNA-binding transcription factor activity
LCH17_09850	COG1175	transmembrane transport
LCH17_09860	COG3842	ATPase activity
LCH17_09870	COG2203	Gaf domain
LCH17_09870	COG2199	diguanylate cyclase activity
LCH17_09890	COG1247	-acetyltransferase
LCH17_09895	COG0753	catalase activity
LCH17_09920	COG0494	nUDIX hydrolase
LCH17_09925	COG0628	permease
LCH17_09935	COG2957	Belongs to the agmatine deiminase family
LCH17_09940	COG0583	DNA-binding transcription factor activity
LCH17_09945	COG3284	Transcriptional regulator
LCH17_09960	COG1461	Dihydroxyacetone kinase
LCH17_09965	COG2376	Dihydroxyacetone kinase
LCH17_09970	COG2252	PERMEase
LCH17_10005	COG0203	ribosomal protein L17
LCH17_10010	COG0202	RNA polymerase activity
LCH17_10015	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LCH17_10020	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LCH17_10025	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LCH17_10030	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LCH17_10035	COG0201	protein transport
LCH17_10040	COG0200	Binds to the 23S rRNA
LCH17_10045	COG1841	ribosomal large subunit assembly
LCH17_10050	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LCH17_10055	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LCH17_10060	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LCH17_10065	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LCH17_10070	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LCH17_10075	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LCH17_10080	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LCH17_10085	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LCH17_10090	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LCH17_10095	COG0255	Belongs to the universal ribosomal protein uL29 family
LCH17_10100	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LCH17_10105	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LCH17_10110	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LCH17_10115	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LCH17_10120	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LCH17_10125	COG0089	rRNA binding
LCH17_10130	COG0088	Forms part of the polypeptide exit tunnel
LCH17_10135	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LCH17_10140	COG0051	transcription antitermination factor activity, RNA binding
LCH17_10160	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LCH17_10165	COG2183	response to ionizing radiation
LCH17_10185	COG0596	Alpha beta hydrolase
LCH17_10190	COG1040	competence protein
LCH17_10195	COG0316	Belongs to the HesB IscA family
LCH17_10195	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
LCH17_10200	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
LCH17_10205	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
LCH17_10210	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LCH17_10215	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LCH17_10220	COG4942	peptidase
LCH17_10230	COG1609	Transcriptional regulator
LCH17_10235	COG0800	Aldolase
LCH17_10245	COG3265	gluconokinase activity
LCH17_10250	COG2610	gluconate transmembrane transporter activity
LCH17_10255	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LCH17_10260	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LCH17_10270	COG0456	acetyltransferase
LCH17_10280	COG1490	D-aminoacyl-tRNA deacylase activity
LCH17_10285	COG1295	ribonuclease BN
LCH17_10290	COG1217	gtp-binding protein TYPA
LCH17_10295	COG0174	glutamine synthetase
LCH17_10305	COG3852	Histidine kinase
LCH17_10310	COG2204	response regulator
LCH17_10315	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LCH17_10320	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LCH17_10330	COG3078	GTPase activator activity
LCH17_10340	COG0218	Necessary for normal cell division and for the maintenance of normal septation
LCH17_10350	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LCH17_10355	COG0408	coproporphyrinogen oxidase activity
LCH17_10360	COG0009	L-threonylcarbamoyladenylate synthase
LCH17_10370	COG0551	DNA topoisomerase type I activity
LCH17_10375	COG2922	Belongs to the Smg family
LCH17_10380	COG0758	DNA mediated transformation
LCH17_10390	COG0242	peptide deformylase activity
LCH17_10395	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LCH17_10400	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LCH17_10400	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LCH17_10405	COG0569	domain protein
LCH17_10410	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LCH17_10415	COG1322	Protein conserved in bacteria
LCH17_10435	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LCH17_10440	COG0686	Belongs to the AlaDH PNT family
LCH17_10445	COG0519	Catalyzes the synthesis of GMP from XMP
LCH17_10445	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LCH17_10455	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LCH17_10460	COG1396	sequence-specific DNA binding
LCH17_10465	COG1012	belongs to the aldehyde dehydrogenase family
LCH17_10475	COG2962	Rard protein
LCH17_10485	COG1280	lysine exporter protein (LysE YggA)
LCH17_10495	COG2391	methyltransferase activity
LCH17_10500	COG1280	lysine exporter protein (LysE YggA)
LCH17_10505	COG0583	DNA-binding transcription factor activity
LCH17_10555	COG0583	DNA-binding transcription factor activity
LCH17_10580	COG0210	DNA helicase
LCH17_10595	COG1744	ABC transporter substrate-binding protein PnrA-like
LCH17_10600	COG3845	ABC transporter
LCH17_10605	COG4603	Belongs to the binding-protein-dependent transport system permease family
LCH17_10610	COG1079	Belongs to the binding-protein-dependent transport system permease family
LCH17_10615	COG0583	DNA-binding transcription factor activity
LCH17_10635	COG1262	PFAM Formylglycine-generating sulfatase enzyme
LCH17_10640	COG0385	Bile acid
LCH17_10645	COG0531	amino acid
LCH17_10650	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LCH17_10655	COG0531	amino acid
LCH17_10660	COG2731	YhcH YjgK YiaL family protein
LCH17_10670	COG4584	PFAM Integrase catalytic
LCH17_10675	COG1484	DNA-dependent DNA replication
LCH17_10680	COG3250	beta-galactosidase activity
LCH17_10685	COG1609	Transcriptional regulator
LCH17_10720	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LCH17_10725	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LCH17_10725	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LCH17_10730	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
LCH17_10735	COG3074	FtsZ-dependent cytokinesis
LCH17_10745	COG1045	serine acetyltransferase
LCH17_10755	COG0745	RESPONSE REGULATOR receiver
LCH17_10760	COG2205	protein histidine kinase activity
LCH17_10765	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LCH17_10770	COG0534	Mate efflux family protein
LCH17_10785	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LCH17_10790	COG2937	Belongs to the GPAT DAPAT family
LCH17_10795	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
LCH17_10800	COG3161	chorismate lyase activity
LCH17_10805	COG1580	Controls the rotational direction of flagella during chemotaxis
LCH17_10820	COG0604	alcohol dehydrogenase
LCH17_10825	COG1609	Transcriptional regulator
LCH17_10845	COG1519	Transferase
LCH17_10850	COG0859	PFAM glycosyl transferase family 9
LCH17_10855	COG0463	Glycosyl transferase, family 2
LCH17_10860	COG0859	PFAM glycosyl transferase family 9
LCH17_10865	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LCH17_10870	COG2990	Protein conserved in bacteria
LCH17_10875	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
LCH17_10885	COG0267	Belongs to the bacterial ribosomal protein bL33 family
LCH17_10890	COG0227	Belongs to the bacterial ribosomal protein bL28 family
LCH17_10895	COG2003	Belongs to the UPF0758 family
LCH17_10900	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LCH17_10905	COG0756	dUTP diphosphatase activity
LCH17_10910	COG1309	transcriptional regulator
LCH17_10915	COG0668	transmembrane transport
LCH17_10925	COG0166	Belongs to the GPI family
LCH17_10930	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LCH17_10935	COG0583	DNA-binding transcription factor activity
LCH17_10980	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
LCH17_10985	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LCH17_10990	COG1739	Uncharacterized protein family UPF0029
LCH17_10995	COG0006	proline dipeptidase activity
LCH17_11000	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LCH17_11005	COG1024	Enoyl-CoA hydratase
LCH17_11005	COG1250	3-hydroxyacyl-CoA dehydrogenase
LCH17_11010	COG0183	Belongs to the thiolase family
LCH17_11035	COG0425	Belongs to the sulfur carrier protein TusA family
LCH17_11040	COG0251	oxidation-reduction process
LCH17_11050	COG2885	chlorophyll binding
LCH17_11060	COG2818	Glycosylase
LCH17_11065	COG0752	glycyl-tRNA synthetase alpha subunit
LCH17_11070	COG0751	glycine-tRNA ligase activity
LCH17_11080	COG0529	Catalyzes the synthesis of activated sulfate
LCH17_11100	COG0814	amino acid
LCH17_11105	COG0348	domain, Protein
LCH17_11115	COG0446	pyridine nucleotide-disulphide oxidoreductase
LCH17_11120	COG0426	domain, Protein
LCH17_11120	COG1773	rubredoxin
LCH17_11125	COG3604	Transcriptional regulator
LCH17_11130	COG2188	Transcriptional regulator
LCH17_11145	COG1609	Transcriptional regulator
LCH17_11185	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LCH17_11210	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
LCH17_11225	COG3118	belongs to the thioredoxin family
LCH17_11230	COG0513	Belongs to the DEAD box helicase family
LCH17_11235	COG0248	Ppx GppA phosphatase
LCH17_11245	COG0742	ribosomal rna small subunit methyltransferase
LCH17_11265	COG0084	hydrolase, TatD family'
LCH17_11270	COG0805	protein transport
LCH17_11275	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LCH17_11285	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
LCH17_11290	COG3165	ubiquinone biosynthetic process from chorismate
LCH17_11300	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LCH17_11305	COG0402	S-adenosylhomocysteine deaminase activity
LCH17_11350	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
LCH17_11355	COG0848	biopolymer transport protein
LCH17_11360	COG0811	peptide transport
LCH17_11365	COG0811	peptide transport
LCH17_11375	COG2771	luxR family
LCH17_11380	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
LCH17_11385	COG1349	DNA-binding transcription factor activity
LCH17_11390	COG0745	RESPONSE REGULATOR receiver
LCH17_11395	COG2205	protein histidine kinase activity
LCH17_11405	COG4452	Inner membrane protein CreD
LCH17_11410	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LCH17_11415	COG0355	proton-transporting ATP synthase activity, rotational mechanism
LCH17_11420	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LCH17_11425	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LCH17_11430	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LCH17_11435	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LCH17_11440	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LCH17_11450	COG0356	it plays a direct role in the translocation of protons across the membrane
LCH17_11460	COG1475	DNA binding
LCH17_11465	COG1192	Involved in chromosome partitioning
LCH17_11470	COG0357	Ribosomal RNA small subunit methyltransferase G
LCH17_11475	COG0445	tRNA wobble uridine modification
LCH17_11480	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LCH17_11485	COG4774	siderophore transport
LCH17_11490	COG4615	Cyclic peptide transporter
LCH17_11495	COG1120	ATPase activity
LCH17_11510	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LCH17_11515	COG0706	membrane insertase activity
LCH17_11520	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
LCH17_11525	COG0594	ribonuclease P activity
LCH17_11530	COG0230	Belongs to the bacterial ribosomal protein bL34 family
LCH17_11535	COG1126	abc transporter atp-binding protein
LCH17_11550	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LCH17_11555	COG0592	DNA-directed DNA polymerase activity
LCH17_11575	COG2378	regulation of single-species biofilm formation
LCH17_11580	COG0071	Belongs to the small heat shock protein (HSP20) family
LCH17_11585	COG0071	Belongs to the small heat shock protein (HSP20) family
LCH17_11590	COG3977	Valine--pyruvate aminotransferase
LCH17_11605	COG2814	Major facilitator Superfamily
LCH17_11610	COG0745	RESPONSE REGULATOR receiver
LCH17_11615	COG2205	protein histidine kinase activity
LCH17_11635	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LCH17_11640	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LCH17_11640	COG4191	Histidine kinase
LCH17_11645	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LCH17_11650	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LCH17_11655	COG1309	transcriptional regulator
LCH17_11685	COG0469	pyruvate kinase activity
LCH17_11690	COG2271	Major facilitator Superfamily
LCH17_11715	COG0561	phosphatase activity
LCH17_11720	COG2267	carboxylic ester hydrolase activity
LCH17_11730	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LCH17_11735	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LCH17_11740	COG1758	RNA polymerase activity
LCH17_11750	COG0859	PFAM glycosyl transferase family 9
LCH17_11755	COG3642	lipopolysaccharide core region biosynthetic process
LCH17_11795	COG0589	response to stress
LCH17_11800	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
LCH17_11810	COG1528	Iron-storage protein
LCH17_11815	COG2081	HI0933 family
LCH17_11820	COG2223	nitrite transmembrane transporter activity
LCH17_11825	COG1280	lysine exporter protein (LysE YggA)
LCH17_11840	COG3188	usher protein
LCH17_11860	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LCH17_11860	COG2205	protein histidine kinase activity
LCH17_11870	COG3275	phosphorelay sensor kinase activity
LCH17_11875	COG3279	Response regulator of the LytR AlgR family
LCH17_11880	COG2223	nitrite transmembrane transporter activity
LCH17_11885	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LCH17_11890	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LCH17_11905	COG0583	DNA-binding transcription factor activity
LCH17_11910	COG4206	TonB-dependent receptor
LCH17_11915	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
LCH17_11950	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LCH17_11955	COG2166	iron-sulfur cluster assembly
LCH17_11960	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LCH17_11965	COG0210	DNA helicase
LCH17_11975	COG3245	cytochrome
LCH17_11980	COG1063	alcohol dehydrogenase
LCH17_11985	COG0156	8-amino-7-oxononanoate synthase activity
LCH17_11995	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LCH17_12010	COG3306	glycosyltransferase involved in LPS biosynthesis
LCH17_12030	COG1561	YicC-like family, N-terminal region
LCH17_12035	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
LCH17_12040	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LCH17_12050	COG0789	Transcriptional regulator
LCH17_12055	COG2203	Gaf domain
LCH17_12055	COG4251	negative regulation of phosphorylation
LCH17_12055	COG5001	Diguanylate cyclase
LCH17_12055	COG3706	GGDEF domain
LCH17_12060	COG3084	Protein conserved in bacteria
LCH17_12070	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LCH17_12075	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LCH17_12085	COG1335	isochorismatase
LCH17_12095	COG1683	Conserved Protein
LCH17_12100	COG0204	Acyl-transferase
LCH17_12105	COG0204	Acyl-transferase
LCH17_12110	COG0606	chelatase, subunit chli
LCH17_12120	COG3978	acetolactate synthase activity
LCH17_12130	COG0129	dihydroxy-acid dehydratase activity
LCH17_12150	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LCH17_12155	COG0254	rRNA binding
LCH17_12160	COG0702	epimerase
LCH17_12165	COG0281	malic enzyme
LCH17_12175	COG2205	protein histidine kinase activity
LCH17_12180	COG0745	RESPONSE REGULATOR receiver
LCH17_12185	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LCH17_12200	COG0366	Alpha amylase catalytic
LCH17_12215	COG0443	Heat shock 70 kDa protein
LCH17_12220	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LCH17_12225	COG3045	CreA protein
LCH17_12245	COG0174	glutamine synthetase
LCH17_12265	COG3842	ATPase activity
LCH17_12270	COG1176	ABC-type spermidine putrescine transport system, permease component I
LCH17_12275	COG1177	transmembrane transport
LCH17_12280	COG2258	MOSC domain
LCH17_12295	COG2050	protein possibly involved in aromatic compounds catabolism
LCH17_12300	COG0514	ATP-dependent DNA helicase (RecQ)
LCH17_12310	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
LCH17_12320	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
LCH17_12325	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LCH17_12335	COG2239	Acts as a magnesium transporter
LCH17_12340	COG1648	precorrin-2 dehydrogenase activity
LCH17_12340	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LCH17_12345	COG2116	formate transmembrane transporter activity
LCH17_12355	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LCH17_12365	COG0477	Major facilitator Superfamily
LCH17_12370	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LCH17_12375	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LCH17_12395	COG1595	DNA-templated transcription, initiation
LCH17_12400	COG3806	Anti-sigma factor
LCH17_12405	COG1968	undecaprenyl-diphosphatase activity
LCH17_12410	COG0667	Aldo Keto reductase
LCH17_12415	COG2017	converts alpha-aldose to the beta-anomer
LCH17_12420	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
LCH17_12430	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LCH17_12435	COG1609	Transcriptional regulator
LCH17_12440	COG3250	beta-galactosidase activity
LCH17_12460	COG0840	transmembrane signaling receptor activity
LCH17_12490	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LCH17_12495	COG1288	antiporter activity
LCH17_12500	COG1438	arginine binding
LCH17_12505	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
LCH17_12510	COG0540	Belongs to the ATCase OTCase family
LCH17_12530	COG0688	phosphatidylethanolamine metabolic process
LCH17_12540	COG3040	lipid binding
LCH17_12545	COG2207	Transcriptional regulator
LCH17_12550	COG1979	alcohol dehydrogenase
LCH17_12555	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
LCH17_12560	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
LCH17_12570	COG3681	Belongs to the UPF0597 family
LCH17_12580	COG0446	pyridine nucleotide-disulphide oxidoreductase
LCH17_12585	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LCH17_12590	COG0564	pseudouridine synthase activity
LCH17_12600	COG0542	response to heat
LCH17_12605	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
LCH17_12610	COG2502	aspartate--ammonia ligase
LCH17_12615	COG1522	sequence-specific DNA binding
LCH17_12625	COG5413	integral membrane protein
LCH17_12650	COG2205	protein histidine kinase activity
LCH17_12660	COG2204	response regulator
LCH17_12675	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
LCH17_12705	COG0243	molybdopterin cofactor binding
LCH17_12710	COG3005	denitrification pathway
LCH17_12715	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LCH17_12735	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LCH17_12740	COG0569	domain protein
LCH17_12745	COG0812	UDP-N-acetylmuramate dehydrogenase activity
LCH17_12770	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LCH17_12785	COG0250	Participates in transcription elongation, termination and antitermination
LCH17_12790	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LCH17_12795	COG0081	regulation of translation
LCH17_12800	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LCH17_12805	COG0222	ribosome binding
LCH17_12810	COG0085	RNA polymerase activity
LCH17_12815	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LCH17_12820	COG2964	Protein conserved in bacteria
LCH17_12825	COG0251	oxidation-reduction process
LCH17_12835	COG2923	Belongs to the DsrF TusC family
LCH17_12840	COG2168	tRNA wobble position uridine thiolation
LCH17_12845	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LCH17_12850	COG0049	tRNA binding
LCH17_12855	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LCH17_12860	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LCH17_12865	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LCH17_12910	COG2249	NAD(P)H dehydrogenase (quinone) activity
LCH17_12915	COG0583	DNA-binding transcription factor activity
LCH17_12920	COG4221	oxidoreductase activity
LCH17_12935	COG1770	oligopeptidase
LCH17_12955	COG3714	YhhN family
LCH17_12980	COG1301	dicarboxylic acid transport
LCH17_12990	COG2095	MarC family integral membrane protein
LCH17_13000	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LCH17_13010	COG0741	lytic transglycosylase activity
LCH17_13020	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LCH17_13045	COG0742	ribosomal rna small subunit methyltransferase
LCH17_13050	COG0552	protein localization to endoplasmic reticulum
LCH17_13055	COG2884	Cell division ATP-binding protein ftsE
LCH17_13060	COG2177	Part of the ABC transporter FtsEX involved in
LCH17_13070	COG0288	reversible hydration of carbon dioxide
LCH17_13075	COG2188	Transcriptional regulator
LCH17_13080	COG1228	amidohydrolase
LCH17_13085	COG0010	Belongs to the arginase family
LCH17_13090	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
LCH17_13095	COG2986	histidine ammonia-lyase
LCH17_13100	COG0387	Pfam Sodium calcium exchanger
LCH17_13105	COG2200	EAL domain
LCH17_13110	COG2200	EAL domain
LCH17_13110	COG2199	diguanylate cyclase activity
LCH17_13155	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LCH17_13160	COG1459	type II secretion system
LCH17_13170	COG2165	general secretion pathway protein
LCH17_13205	COG1077	Cell shape determining protein MreB Mrl
LCH17_13210	COG1792	Involved in formation and maintenance of cell shape
LCH17_13215	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
LCH17_13220	COG0424	maF-like protein
LCH17_13225	COG1530	ribonuclease E activity
LCH17_13230	COG3164	Protein of unknown function
LCH17_13240	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LCH17_13245	COG0312	modulator of DNA gyrase
LCH17_13265	COG1263	PTS System
LCH17_13265	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LCH17_13270	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
LCH17_13285	COG0477	Major facilitator Superfamily
LCH17_13295	COG3437	response regulator, receiver
LCH17_13300	COG2205	protein histidine kinase activity
LCH17_13300	COG0784	Response regulator, receiver
LCH17_13300	COG5002	protein histidine kinase activity
LCH17_13305	COG2172	sigma factor antagonist activity
LCH17_13310	COG1366	Belongs to the anti-sigma-factor antagonist family
LCH17_13330	COG3700	Belongs to the class B bacterial acid phosphatase family
LCH17_13335	COG2321	neutral zinc metallopeptidase
LCH17_13345	COG1639	'signal transduction protein
LCH17_13370	COG0189	ligase activity
LCH17_13380	COG0642	Histidine kinase
LCH17_13385	COG0745	RESPONSE REGULATOR receiver
LCH17_13410	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
LCH17_13415	COG0352	thiamine-phosphate diphosphorylase activity
LCH17_13420	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LCH17_13430	COG2022	thiamine diphosphate biosynthetic process
LCH17_13435	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
LCH17_13455	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
LCH17_13475	COG3706	GGDEF domain
LCH17_13480	COG0814	amino acid
LCH17_13485	COG3932	Exopolysaccharide synthesis, ExoD
LCH17_13505	COG1733	regulation of RNA biosynthetic process
LCH17_13545	COG1494	fructose-1,6-bisphosphatase
LCH17_13560	COG2959	enzyme of heme biosynthesis
LCH17_13570	COG0181	hydroxymethylbilane synthase activity
LCH17_13575	COG3072	Adenylate cyclase
LCH17_13580	COG0400	carboxylic ester hydrolase activity
LCH17_13585	COG1965	Belongs to the frataxin family
LCH17_13595	COG0019	diaminopimelate decarboxylase activity
LCH17_13600	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
LCH17_13615	COG1011	Hydrolase
LCH17_13635	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
LCH17_13640	COG0561	phosphatase activity
LCH17_13655	COG1129	ABC transporter
LCH17_13655	COG0842	Transport permease protein
LCH17_13665	COG1058	Belongs to the CinA family
LCH17_13665	COG1546	Belongs to the CinA family
LCH17_13670	COG1418	mRNA catabolic process
LCH17_13675	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
LCH17_13685	COG1522	sequence-specific DNA binding
LCH17_13690	COG1368	sulfuric ester hydrolase activity
LCH17_13710	COG1285	pathogenesis
LCH17_13730	COG4221	oxidoreductase activity
LCH17_13750	COG1979	alcohol dehydrogenase
LCH17_13760	COG2873	o-acetylhomoserine
LCH17_13770	COG4533	DNA binding
LCH17_13785	COG5380	lipid catabolic process
LCH17_13790	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
LCH17_13800	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LCH17_13805	COG2949	membrane
LCH17_13810	COG3291	Pkd domain containing protein
LCH17_13820	COG3539	Fimbrial protein
LCH17_13830	COG3188	usher protein
LCH17_13835	COG3121	Chaperone
LCH17_13855	COG0318	PFAM AMP-dependent synthetase and ligase
LCH17_13860	COG1441	menaquinone biosynthetic process
LCH17_13865	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
LCH17_13870	COG0596	Alpha beta hydrolase
LCH17_13875	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
LCH17_13880	COG1169	isochorismate synthase
LCH17_13885	COG1575	Belongs to the MenA family. Type 1 subfamily
LCH17_13910	COG0513	Belongs to the DEAD box helicase family
LCH17_13915	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LCH17_13920	COG1988	membrane-bound metal-dependent
LCH17_13935	COG1671	Belongs to the UPF0178 family
LCH17_13960	COG3263	regulation of cellular component size
LCH17_13965	COG3722	fumarate hydratase activity
LCH17_13970	COG0246	Mannitol dehydrogenase
LCH17_13975	COG2213	PTS system mannitol-specific
LCH17_13975	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LCH17_13985	COG1309	transcriptional regulator
LCH17_13990	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
LCH17_14000	COG3916	Acyl-homoserine-lactone synthase
LCH17_14005	COG2771	luxR family
LCH17_14020	COG3133	Outer membrane lipoprotein
LCH17_14025	COG0456	acetyltransferase
LCH17_14045	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
LCH17_14050	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LCH17_14060	COG3031	protein transport across the cell outer membrane
LCH17_14070	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LCH17_14075	COG1459	type II secretion system
LCH17_14080	COG2165	general secretion pathway protein
LCH17_14090	COG2165	general secretion pathway protein
LCH17_14095	COG4795	General secretion pathway protein
LCH17_14100	COG3156	type II secretion system protein K
LCH17_14110	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
LCH17_14125	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LCH17_14130	COG1011	Hydrolase
LCH17_14135	COG0494	nUDIX hydrolase
LCH17_14140	COG1218	3'(2'),5'-bisphosphate nucleotidase
LCH17_14145	COG0814	amino acid
LCH17_14150	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LCH17_14155	COG3708	Transcriptional regulator
LCH17_14155	COG2207	Transcriptional regulator
LCH17_14165	COG0626	cystathionine gamma-synthase activity
LCH17_14170	COG0460	homoserine dehydrogenase
LCH17_14170	COG0527	aspartate kinase activity
LCH17_14175	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LCH17_14185	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LCH17_14190	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
LCH17_14200	COG0137	argininosuccinate synthase activity
LCH17_14205	COG0165	Argininosuccinate lyase
LCH17_14225	COG0110	maltose O-acetyltransferase activity
LCH17_14230	COG3174	membrane
LCH17_14235	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
LCH17_14245	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
LCH17_14250	COG4208	sulfate ABC transporter
LCH17_14255	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
LCH17_14260	COG0583	DNA-binding transcription factor activity
LCH17_14265	COG3397	chitin binding
LCH17_14270	COG0840	transmembrane signaling receptor activity
LCH17_14300	COG0793	Belongs to the peptidase S41A family
LCH17_14300	COG4946	Tricorn protease homolog
LCH17_14320	COG1328	CTP reductase activity
LCH17_14325	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LCH17_14340	COG1448	Aminotransferase
LCH17_14380	COG0513	Belongs to the DEAD box helicase family
LCH17_14400	COG0840	transmembrane signaling receptor activity
LCH17_14415	COG3112	Uncharacterised protein family (UPF0231)
LCH17_14425	COG3835	regulator
LCH17_14430	COG2610	gluconate transmembrane transporter activity
LCH17_14435	COG1929	Belongs to the glycerate kinase type-1 family
LCH17_14450	COG0583	DNA-binding transcription factor activity
LCH17_14455	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LCH17_14470	COG0347	Belongs to the P(II) protein family
LCH17_14475	COG1840	ABC-type Fe3 transport system, periplasmic component
LCH17_14480	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
LCH17_14485	COG3842	ATPase activity
LCH17_14490	COG2837	iron assimilation
LCH17_14495	COG1438	arginine binding
LCH17_14500	COG1126	abc transporter atp-binding protein
LCH17_14505	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LCH17_14510	COG4215	(ABC) transporter
LCH17_14515	COG4160	amino acid transport
LCH17_14520	COG0039	L-malate dehydrogenase activity
LCH17_14525	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
LCH17_14530	COG1017	nitric oxide dioxygenase activity
LCH17_14530	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LCH17_14540	COG4536	flavin adenine dinucleotide binding
LCH17_14545	COG4137	Cytochrome C assembly protein
LCH17_14550	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LCH17_14555	COG0228	four-way junction DNA binding
LCH17_14560	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LCH17_14565	COG0336	Belongs to the RNA methyltransferase TrmD family
LCH17_14570	COG0335	large ribosomal subunit rRNA binding
LCH17_14580	COG3066	DNA modification
LCH17_14585	COG1051	belongs to the nudix hydrolase family
LCH17_14595	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LCH17_14600	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LCH17_14605	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LCH17_14615	COG0583	DNA-binding transcription factor activity
LCH17_14620	COG0640	Transcriptional regulator
LCH17_14625	COG0268	Binds directly to 16S ribosomal RNA
LCH17_14630	COG0728	peptidoglycan biosynthetic process
LCH17_14640	COG0196	riboflavin kinase activity
LCH17_14645	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LCH17_14650	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LCH17_14655	COG1047	Peptidyl-prolyl cis-trans
LCH17_14660	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
LCH17_14700	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LCH17_14700	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LCH17_14715	COG1854	S-ribosylhomocysteine lyase activity
LCH17_14720	COG3706	GGDEF domain
LCH17_14725	COG0557	exoribonuclease II activity
LCH17_14730	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LCH17_14740	COG2153	protein acetylation
LCH17_14755	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LCH17_14760	COG1914	H( )-stimulated, divalent metal cation uptake system
LCH17_14765	COG0360	Binds together with S18 to 16S ribosomal RNA
LCH17_14770	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LCH17_14775	COG0359	binds to the 23S rRNA
LCH17_14780	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LCH17_14805	COG1238	metal cluster binding
LCH17_14810	COG0612	Peptidase, M16
LCH17_14815	COG2918	glutathione biosynthetic process
LCH17_14820	COG1022	Amp-dependent synthetase and ligase
LCH17_14830	COG0456	acetyltransferase
LCH17_14840	COG0714	Associated with various cellular activities
LCH17_14850	COG5001	Diguanylate cyclase
LCH17_14850	COG3300	MHYT domain
LCH17_14885	COG1902	pentaerythritol trinitrate reductase activity
LCH17_14895	COG2852	Protein conserved in bacteria
LCH17_14905	COG2957	Belongs to the agmatine deiminase family
LCH17_14910	COG0154	amidase activity
LCH17_14930	COG0513	Belongs to the DEAD box helicase family
LCH17_14950	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
LCH17_14955	COG1858	cytochrome C peroxidase
LCH17_14980	COG2070	2-Nitropropane dioxygenase
LCH17_15015	COG2816	NAD+ diphosphatase activity
LCH17_15020	COG2205	protein histidine kinase activity
LCH17_15025	COG0745	RESPONSE REGULATOR receiver
LCH17_15030	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LCH17_15035	COG0577	efflux transmembrane transporter activity
LCH17_15035	COG1136	(ABC) transporter
LCH17_15040	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LCH17_15045	COG1126	abc transporter atp-binding protein
LCH17_15050	COG0765	amino acid transport
LCH17_15055	COG0765	amino acid transport
LCH17_15060	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
LCH17_15065	COG1505	serine-type exopeptidase activity
LCH17_15080	COG1028	Short-chain dehydrogenase reductase Sdr
LCH17_15085	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
LCH17_15100	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LCH17_15105	COG4991	sh3 domain protein
LCH17_15120	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
LCH17_15125	COG1940	carbohydrate kinase activity
LCH17_15130	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LCH17_15135	COG0126	phosphoglycerate kinase activity
LCH17_15145	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LCH17_15155	COG4232	protein-disulfide reductase activity
LCH17_15185	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
LCH17_15195	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LCH17_15200	COG1595	DNA-templated transcription, initiation
LCH17_15205	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
LCH17_15220	COG0481	GTPase activity
LCH17_15225	COG0681	Belongs to the peptidase S26 family
LCH17_15230	COG0571	ribonuclease III activity
LCH17_15240	COG1381	Involved in DNA repair and RecF pathway recombination
LCH17_15245	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
LCH17_15260	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LCH17_15265	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
LCH17_15270	COG3716	PTS system mannose fructose sorbose family IID component
LCH17_15280	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LCH17_15285	COG2222	sugar isomerase
LCH17_15295	COG1349	DNA-binding transcription factor activity
LCH17_15300	COG3023	N-Acetylmuramoyl-L-alanine amidase
LCH17_15305	COG4807	Protein conserved in bacteria
LCH17_15315	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LCH17_15320	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LCH17_15325	COG3956	TIGRFAM MazG family protein
LCH17_15330	COG0504	CTP synthase activity
LCH17_15335	COG0148	phosphopyruvate hydratase activity
LCH17_15340	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
LCH17_15345	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
LCH17_15355	COG0585	pseudouridine synthase activity
LCH17_15360	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
LCH17_15365	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
LCH17_15370	COG1238	metal cluster binding
LCH17_15385	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LCH17_15390	COG0828	Belongs to the bacterial ribosomal protein bS21 family
LCH17_15395	COG1610	YqeY-like protein
LCH17_15400	COG0358	DNA primase activity
LCH17_15405	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LCH17_15430	COG0151	Belongs to the GarS family
LCH17_15435	COG0138	bifunctional purine biosynthesis protein purh
LCH17_15450	COG3036	rescue of stalled ribosome
LCH17_15455	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LCH17_15460	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LCH17_15470	COG0673	inositol 2-dehydrogenase activity
LCH17_15480	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LCH17_15485	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LCH17_15500	COG0477	Major facilitator Superfamily
LCH17_15510	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LCH17_15515	COG1027	Aspartate ammonia-lyase
LCH17_15520	COG3030	protein affecting phage T7 exclusion by the F plasmid
LCH17_15525	COG0534	Mate efflux family protein
LCH17_15530	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LCH17_15535	COG0459	protein refolding
LCH17_15545	COG3300	MHYT domain
LCH17_15545	COG5001	Diguanylate cyclase
LCH17_15555	COG0564	pseudouridine synthase activity
LCH17_15560	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LCH17_15600	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
LCH17_15610	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
LCH17_15615	COG1178	ABC-type Fe3 transport system permease component
LCH17_15620	COG4143	(ABC) transporter
LCH17_15635	COG0066	3-isopropylmalate dehydratase activity
LCH17_15640	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LCH17_15645	COG0473	3-isopropylmalate dehydrogenase activity
LCH17_15650	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LCH17_15660	COG0671	phosphoesterase, PA-phosphatase related
LCH17_15665	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LCH17_15675	COG0028	Belongs to the TPP enzyme family
LCH17_15685	COG0280	phosphate acetyltransferase
LCH17_15685	COG0857	belongs to the CobB CobQ family
LCH17_15690	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LCH17_15700	COG3013	Belongs to the UPF0304 family
LCH17_15705	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LCH17_15710	COG2716	regulation of RNA biosynthetic process
LCH17_15720	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
LCH17_15725	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
LCH17_15740	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
LCH17_15760	COG0784	Response regulator, receiver
LCH17_15760	COG2198	Histidine kinase
LCH17_15760	COG5002	protein histidine kinase activity
LCH17_15785	COG0840	transmembrane signaling receptor activity
LCH17_15795	COG1464	Belongs to the NlpA lipoprotein family
LCH17_15800	COG2011	ABC-type metal ion transport system permease component
LCH17_15805	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LCH17_15820	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LCH17_15825	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LCH17_15825	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
LCH17_15830	COG0802	atpase or kinase
LCH17_15840	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LCH17_15845	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LCH17_15850	COG1923	regulation of RNA biosynthetic process
LCH17_15855	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LCH17_15860	COG0330	HflC and HflK could
LCH17_15865	COG0330	HflC and HflK could
LCH17_15870	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
LCH17_15875	COG0142	geranyltranstransferase activity
LCH17_15880	COG0261	This protein binds to 23S rRNA in the presence of protein L20
LCH17_15885	COG0211	Belongs to the bacterial ribosomal protein bL27 family
LCH17_15890	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LCH17_15895	COG3314	Sporulation integral membrane protein YlbJ
LCH17_15900	COG0318	PFAM AMP-dependent synthetase and ligase
LCH17_15915	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
LCH17_15920	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LCH17_15930	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
LCH17_15935	COG2967	ApaG domain
LCH17_15940	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
LCH17_15945	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
LCH17_15955	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
LCH17_15960	COG3178	'Phosphotransferase
LCH17_15965	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
LCH17_15970	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
LCH17_15975	COG2252	PERMEase
LCH17_15985	COG0488	(ABC) transporter
LCH17_16000	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LCH17_16005	COG0741	lytic transglycosylase activity
LCH17_16025	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
LCH17_16030	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LCH17_16035	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LCH17_16060	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LCH17_16070	COG3721	Heme iron utilization protein
LCH17_16075	COG0748	coenzyme F420 binding
LCH17_16095	COG4771	TonB-dependent receptor
LCH17_16100	COG2814	Major facilitator Superfamily
LCH17_16105	COG3655	Transcriptional regulator
LCH17_16115	COG2205	protein histidine kinase activity
LCH17_16115	COG2202	Pas domain
LCH17_16130	COG3397	chitin binding
LCH17_16135	COG2226	methyltransferase
LCH17_16145	COG1765	OsmC-like protein
LCH17_16160	COG3954	Phosphoribulokinase
LCH17_16165	COG2076	Multidrug Resistance protein
LCH17_16170	COG2076	Multidrug Resistance protein
LCH17_16175	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LCH17_16180	COG0726	polysaccharide deacetylase
LCH17_16185	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LCH17_16185	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LCH17_16190	COG0463	Glycosyl transferase, family 2
LCH17_16195	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LCH17_16205	COG3089	Belongs to the UPF0270 family
LCH17_16210	COG2203	Gaf domain
LCH17_16210	COG3706	GGDEF domain
LCH17_16210	COG4251	negative regulation of phosphorylation
LCH17_16210	COG5001	Diguanylate cyclase
LCH17_16215	COG0429	hydrolase of the alpha beta-hydrolase fold
LCH17_16220	COG0784	Response regulator, receiver
LCH17_16220	COG0835	chemotaxis
LCH17_16230	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
LCH17_16235	COG1047	Peptidyl-prolyl cis-trans
LCH17_16250	COG0545	Peptidyl-prolyl cis-trans isomerase
LCH17_16255	COG2204	response regulator
LCH17_16275	COG0737	Belongs to the 5'-nucleotidase family
LCH17_16280	COG2200	EAL domain
LCH17_16295	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LCH17_16300	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LCH17_16305	COG0826	peptidase U32
LCH17_16335	COG5642	Protein of unknown function (DUF2384)
LCH17_16345	COG1538	Outer membrane efflux protein
LCH17_16350	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LCH17_16360	COG4584	PFAM Integrase catalytic
LCH17_16365	COG1484	DNA-dependent DNA replication
LCH17_16380	COG0745	RESPONSE REGULATOR receiver
LCH17_16385	COG5002	protein histidine kinase activity
LCH17_16395	COG2217	Heavy metal translocating P-type atpase
LCH17_16420	COG2132	Multicopper oxidase
LCH17_16460	COG1393	Belongs to the ArsC family
LCH17_16465	COG0798	PFAM Bile acid sodium symporter
LCH17_16475	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LCH17_16485	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LCH17_16500	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LCH17_16505	COG0640	Transcriptional regulator
LCH17_16525	COG0437	4 iron, 4 sulfur cluster binding
LCH17_16530	COG0243	molybdopterin cofactor binding
LCH17_16580	COG1522	sequence-specific DNA binding
LCH17_16590	COG4584	PFAM Integrase catalytic
LCH17_16595	COG1484	DNA-dependent DNA replication
LCH17_16600	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LCH17_16615	COG0747	negative chemotaxis
LCH17_16625	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LCH17_16630	COG4172	Belongs to the ABC transporter superfamily
LCH17_16680	COG2199	diguanylate cyclase activity
LCH17_16680	COG2200	EAL domain
LCH17_16680	COG2203	Gaf domain
LCH17_16695	COG3188	usher protein
LCH17_16705	COG2197	response regulator
LCH17_16735	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LCH17_16740	COG2201	protein-glutamate methylesterase activity
LCH17_16745	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
LCH17_16755	COG0840	transmembrane signaling receptor activity
LCH17_16760	COG0835	chemotaxis
LCH17_16770	COG0643	Histidine kinase
LCH17_16770	COG2198	Histidine kinase
LCH17_16785	COG0840	transmembrane signaling receptor activity
LCH17_16790	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LCH17_16800	COG1280	lysine exporter protein (LysE YggA)
LCH17_16805	COG0826	peptidase U32
LCH17_16820	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LCH17_16835	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
LCH17_16860	COG0300	oxidoreductase activity
LCH17_16870	COG0840	transmembrane signaling receptor activity
LCH17_16935	COG3710	Transcriptional regulator
LCH17_16965	COG1605	Chorismate mutase
LCH17_16965	COG0077	Prephenate dehydratase
LCH17_16995	COG3272	Protein of unknown function (DUF1722)
LCH17_17000	COG0789	Transcriptional regulator
LCH17_17005	COG0415	Belongs to the DNA photolyase family
LCH17_17015	COG4221	oxidoreductase activity
LCH17_17030	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LCH17_17055	COG0783	Belongs to the Dps family
LCH17_17060	COG1151	hydroxylamine reductase activity
LCH17_17070	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LCH17_17075	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LCH17_17075	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LCH17_17085	COG2771	luxR family
LCH17_17100	COG3501	Rhs element vgr protein
LCH17_17115	COG1484	DNA-dependent DNA replication
LCH17_17120	COG4584	PFAM Integrase catalytic
LCH17_17160	COG0693	protein deglycase activity
LCH17_17165	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LCH17_17170	COG1666	GTP binding
LCH17_17180	COG2211	Major facilitator Superfamily
LCH17_17190	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LCH17_17200	COG2813	Specifically methylates the guanine in position
LCH17_17205	COG0271	Belongs to the BolA IbaG family
LCH17_17210	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LCH17_17215	COG1805	sodium ion transport
LCH17_17220	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LCH17_17225	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LCH17_17230	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LCH17_17235	COG2871	sodium ion transport
LCH17_17240	COG1477	protein flavinylation
LCH17_17255	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LCH17_17260	COG0840	transmembrane signaling receptor activity
LCH17_17265	COG0583	DNA-binding transcription factor activity
LCH17_17275	COG2363	Small membrane protein
LCH17_17280	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
LCH17_17290	COG0473	3-isopropylmalate dehydrogenase activity
LCH17_17295	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LCH17_17300	COG1611	Belongs to the LOG family
LCH17_17315	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
LCH17_17315	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
LCH17_17325	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
LCH17_17350	COG3098	single-species biofilm formation
LCH17_17355	COG0564	pseudouridine synthase activity
LCH17_17365	COG4580	involved in the transport of maltose and maltodextrins
LCH17_17375	COG1263	PTS System
LCH17_17375	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LCH17_17385	COG2171	N-acyltransferase activity
LCH17_17390	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
LCH17_17395	COG0024	Methionine aminopeptidase
LCH17_17400	COG0052	Belongs to the universal ribosomal protein uS2 family
LCH17_17405	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LCH17_17410	COG0528	UMP kinase activity
LCH17_17415	COG0233	cytoplasmic translational termination
LCH17_17420	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LCH17_17425	COG0575	Belongs to the CDS family
LCH17_17430	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
LCH17_17435	COG0750	zinc metalloprotease
LCH17_17450	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LCH17_17455	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LCH17_17460	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LCH17_17465	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LCH17_17470	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LCH17_17480	COG0825	malonyl-CoA metabolic process
LCH17_17485	COG3710	Transcriptional regulator
LCH17_17490	COG0531	amino acid
LCH17_17495	COG1982	Orn Lys Arg decarboxylase major
LCH17_17500	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
LCH17_17515	COG0814	amino acid
LCH17_17520	COG1234	tRNA 3'-trailer cleavage
LCH17_17530	COG1073	alpha beta
LCH17_17535	COG1073	alpha beta
LCH17_17545	COG0531	amino acid
LCH17_17555	COG0488	(ABC) transporter
LCH17_17565	COG3590	peptidase
LCH17_17570	COG0037	tRNA processing
LCH17_17575	COG3706	GGDEF domain
LCH17_17610	COG0366	Alpha amylase catalytic
LCH17_17625	COG0463	Glycosyl transferase, family 2
LCH17_17640	COG2989	Protein conserved in bacteria
LCH17_17645	COG3108	Peptidase M15
LCH17_17655	COG2860	membrane
LCH17_17665	COG1196	nuclear chromosome segregation
LCH17_17670	COG3115	cell septum assembly
LCH17_17675	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LCH17_17685	COG1328	CTP reductase activity
LCH17_17690	COG0602	queuosine metabolic process
LCH17_17720	COG1566	PFAM secretion protein HlyD family protein
LCH17_17725	COG1846	Transcriptional regulator
LCH17_17740	COG0281	malic enzyme
LCH17_17745	COG3290	protein histidine kinase activity
LCH17_17750	COG4565	transcriptional regulatory protein
LCH17_17755	COG0697	spore germination
LCH17_17770	COG3284	Transcriptional regulator
LCH17_17775	COG1960	acyl-CoA dehydrogenase activity
LCH17_17780	COG1804	L-carnitine dehydratase bile acid-inducible protein F
LCH17_17785	COG0346	lactoylglutathione lyase activity
LCH17_17790	COG0745	RESPONSE REGULATOR receiver
LCH17_17795	COG5002	protein histidine kinase activity
LCH17_17820	COG3142	Participates in the control of copper homeostasis
LCH17_17825	COG0545	Peptidyl-prolyl cis-trans isomerase
LCH17_17830	COG1131	(ABC) transporter
LCH17_17850	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
LCH17_17860	COG0678	peroxiredoxin activity
LCH17_17870	COG0019	diaminopimelate decarboxylase activity
LCH17_17875	COG1115	amino acid carrier protein
LCH17_17880	COG0095	Lipoate-protein ligase
LCH17_17885	COG2233	PERMEase
LCH17_17900	COG0534	Mate efflux family protein
LCH17_17910	COG0281	malic enzyme
LCH17_17940	COG0733	neurotransmitter:sodium symporter activity
LCH17_17945	COG1752	Esterase of the alpha-beta hydrolase superfamily
LCH17_17950	COG2203	Gaf domain
LCH17_17950	COG2199	diguanylate cyclase activity
LCH17_17955	COG1566	PFAM secretion protein HlyD family protein
LCH17_17960	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LCH17_17970	COG1032	radical SAM domain protein
LCH17_17990	COG3152	Membrane
LCH17_18020	COG0673	inositol 2-dehydrogenase activity
LCH17_18025	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
LCH17_18030	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LCH17_18035	COG1196	nuclear chromosome segregation
LCH17_18035	COG0739	heme binding
LCH17_18035	COG0741	lytic transglycosylase activity
LCH17_18040	COG0366	Alpha amylase catalytic
LCH17_18060	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LCH17_18070	COG0788	formyltetrahydrofolate deformylase activity
LCH17_18075	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LCH17_18085	COG3118	belongs to the thioredoxin family
LCH17_18090	COG2091	lysine biosynthetic process via aminoadipic acid
LCH17_18095	COG0791	NLP P60 protein
LCH17_18100	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
LCH17_18115	COG1376	ErfK ybiS ycfS ynhG family protein
LCH17_18115	COG1388	LysM domain
LCH17_18125	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LCH17_18130	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LCH17_18135	COG0745	RESPONSE REGULATOR receiver
LCH17_18140	COG5002	protein histidine kinase activity
LCH17_18160	COG4869	propanediol catabolic process
LCH17_18170	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LCH17_18175	COG1882	Formate acetyltransferase
LCH17_18180	COG1012	belongs to the aldehyde dehydrogenase family
LCH17_18180	COG1454	alcohol dehydrogenase
LCH17_18190	COG1012	belongs to the aldehyde dehydrogenase family
LCH17_18190	COG1454	alcohol dehydrogenase
LCH17_18225	COG0583	DNA-binding transcription factor activity
LCH17_18230	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LCH17_18235	COG0243	molybdopterin cofactor binding
LCH17_18245	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LCH17_18255	COG1960	acyl-CoA dehydrogenase activity
LCH17_18260	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LCH17_18270	COG0469	pyruvate kinase activity
LCH17_18275	COG1737	Transcriptional regulator
LCH17_18295	COG2274	protein secretion by the type I secretion system
LCH17_18305	COG2274	protein secretion by the type I secretion system
LCH17_18315	COG2994	toxin metabolic process
LCH17_18320	COG1073	alpha beta
LCH17_18320	COG3064	Membrane
LCH17_18320	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
LCH17_18330	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LCH17_18345	COG1677	Flagellar hook-basal body complex protein FliE
LCH17_18355	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LCH17_18410	COG1684	flagellar biosynthetic protein fliR
LCH17_18420	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LCH17_18445	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
LCH17_18450	COG2198	Histidine kinase
LCH17_18450	COG0643	Histidine kinase
LCH17_18450	COG0784	Response regulator, receiver
LCH17_18455	COG2201	protein-glutamate methylesterase activity
LCH17_18460	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LCH17_18465	COG1360	Flagellar Motor Protein
LCH17_18470	COG1192	Involved in chromosome partitioning
LCH17_18480	COG0835	chemotaxis
LCH17_18495	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LCH17_18500	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LCH17_18505	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LCH17_18510	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
LCH17_18515	COG1138	Cytochrome C-type biogenesis protein
LCH17_18520	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LCH17_18525	COG3088	subunit of a heme lyase
LCH17_18525	COG4235	cytochrome complex assembly
LCH17_18530	COG3088	subunit of a heme lyase
LCH17_18530	COG4235	cytochrome complex assembly
LCH17_18545	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
LCH17_18550	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LCH17_18550	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LCH17_18565	COG0259	pyridoxamine-phosphate oxidase activity
LCH17_18570	COG0625	glutathione transferase activity
LCH17_18580	COG3153	acetyltransferase
LCH17_18590	COG2850	peptidyl-arginine hydroxylation
LCH17_18595	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LCH17_18600	COG2915	High frequency lysogenization protein hflD homolog
LCH17_18605	COG0482	sulfurtransferase activity
LCH17_18615	COG1187	pseudouridine synthase activity
LCH17_18625	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LCH17_18635	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LCH17_18635	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LCH17_18635	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LCH17_18665	COG0789	Transcriptional regulator
LCH17_18675	COG1609	Transcriptional regulator
LCH17_18680	COG1263	PTS System
LCH17_18680	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LCH17_18685	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
LCH17_18695	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LCH17_18710	COG1482	cell wall glycoprotein biosynthetic process
LCH17_18715	COG2207	Transcriptional regulator
LCH17_18720	COG0538	isocitrate dehydrogenase activity
LCH17_18730	COG3048	D-serine ammonia-lyase activity
LCH17_18735	COG0583	DNA-binding transcription factor activity
LCH17_18740	COG1940	carbohydrate kinase activity
LCH17_18745	COG0514	ATP-dependent DNA helicase (RecQ)
LCH17_18765	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
LCH17_18770	COG2867	negative regulation of translational initiation
LCH17_18775	COG2914	Belongs to the UPF0125 (RnfH) family
LCH17_18780	COG0702	epimerase
LCH17_18785	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LCH17_18790	COG1454	alcohol dehydrogenase
LCH17_18800	COG0564	pseudouridine synthase activity
LCH17_18830	COG1280	lysine exporter protein (LysE YggA)
LCH17_18850	COG3263	regulation of cellular component size
LCH17_18860	COG1876	peptidase activity
LCH17_18865	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LCH17_18870	COG1393	Belongs to the ArsC family
LCH17_18875	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
LCH17_18890	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
LCH17_18905	COG0583	DNA-binding transcription factor activity
LCH17_18915	COG3069	C4-dicarboxylate transmembrane transporter activity
LCH17_18930	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LCH17_18935	COG0017	Asparaginyl-tRNA synthetase
LCH17_18955	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
LCH17_18960	COG0156	8-amino-7-oxononanoate synthase activity
LCH17_18965	COG1073	alpha beta
LCH17_18965	COG2226	methyltransferase
LCH17_18970	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
LCH17_18975	COG0501	Belongs to the peptidase M48B family
LCH17_18985	COG0633	Ferredoxin
LCH17_18985	COG3217	Mosc domain protein beta barrel domain protein
LCH17_18985	COG0633	Ferredoxin
LCH17_18985	COG3217	Mosc domain protein beta barrel domain protein
LCH17_18995	COG1013	pyruvate-flavodoxin oxidoreductase activity
LCH17_18995	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
LCH17_18995	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
LCH17_18995	COG0674	pyruvate-flavodoxin oxidoreductase activity
LCH17_19015	COG0534	Mate efflux family protein
LCH17_19055	COG1309	transcriptional regulator
LCH17_19070	COG0791	NLP P60 protein
LCH17_19080	COG0583	DNA-binding transcription factor activity
LCH17_19085	COG0450	alkyl hydroperoxide reductase
LCH17_19105	COG0500	methyltransferase
LCH17_19110	COG4106	trans-aconitate 2-methyltransferase activity
LCH17_19115	COG1801	Protein of unknown function DUF72
LCH17_19120	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
LCH17_19125	COG0217	transcriptional regulatory protein
LCH17_19130	COG2194	sulfuric ester hydrolase activity
LCH17_19135	COG1846	Transcriptional regulator
LCH17_19135	COG1940	carbohydrate kinase activity
LCH17_19140	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LCH17_19145	COG0363	glucosamine-6-phosphate deaminase activity
LCH17_19150	COG2190	(PTS) system
LCH17_19150	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LCH17_19150	COG1263	PTS System
LCH17_19165	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LCH17_19170	COG0735	belongs to the Fur family
LCH17_19180	COG0716	FMN binding
LCH17_19195	COG0596	Alpha beta hydrolase
LCH17_19200	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
LCH17_19205	COG0033	Phosphoglucomutase
LCH17_19215	COG1846	Transcriptional regulator
LCH17_19230	COG2951	lytic endotransglycosylase activity
LCH17_19235	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LCH17_19240	COG4136	ATPase activity
LCH17_19245	COG4135	transport system, permease component
LCH17_19250	COG4134	Bacterial extracellular solute-binding protein
LCH17_19260	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LCH17_19270	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LCH17_19275	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LCH17_19285	COG0729	surface antigen
LCH17_19310	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LCH17_19320	COG0741	lytic transglycosylase activity
LCH17_19335	COG1607	acyl-coa hydrolase
LCH17_19345	COG3021	interspecies interaction between organisms
LCH17_19350	COG0741	lytic transglycosylase activity
LCH17_19350	COG1388	LysM domain
LCH17_19360	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LCH17_19365	COG2226	methyltransferase
LCH17_19370	COG0328	RNA-DNA hybrid ribonuclease activity
LCH17_19385	COG3437	response regulator, receiver
LCH17_19385	COG0784	Response regulator, receiver
LCH17_19390	COG1960	acyl-CoA dehydrogenase activity
LCH17_19395	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
LCH17_19400	COG0121	glutamine amidotransferase
LCH17_19430	COG2197	response regulator
LCH17_19435	COG3850	Histidine kinase
LCH17_19440	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LCH17_19445	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LCH17_19445	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
LCH17_19455	COG0243	molybdopterin cofactor binding
LCH17_19460	COG0437	4 iron, 4 sulfur cluster binding
LCH17_19465	COG0348	domain, Protein
LCH17_19475	COG3005	denitrification pathway
LCH17_19480	COG0521	Mo-molybdopterin cofactor biosynthetic process
LCH17_19485	COG0315	cyclic pyranopterin monophosphate synthase activity
LCH17_19490	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
LCH17_19495	COG0314	molybdopterin synthase activity
LCH17_19510	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
LCH17_19515	COG2267	carboxylic ester hydrolase activity
LCH17_19520	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LCH17_19530	COG0302	gtp cyclohydrolase
LCH17_19535	COG0840	transmembrane signaling receptor activity
LCH17_19540	COG2759	Belongs to the formate--tetrahydrofolate ligase family
LCH17_19550	COG0583	DNA-binding transcription factor activity
LCH17_19580	COG2195	Cleaves the N-terminal amino acid of tripeptides
LCH17_19590	COG1166	arginine decarboxylase activity
LCH17_19610	COG0814	amino acid
LCH17_19620	COG3681	Belongs to the UPF0597 family
LCH17_19625	COG2964	Protein conserved in bacteria
LCH17_19655	COG0346	lactoylglutathione lyase activity
LCH17_19670	COG1187	pseudouridine synthase activity
LCH17_19675	COG2807	transmembrane transport
LCH17_19685	COG0583	DNA-binding transcription factor activity
LCH17_19690	COG2271	Major facilitator Superfamily
LCH17_19715	COG2979	Protein of unknown function (DUF533)
LCH17_19720	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LCH17_19730	COG1294	oxidase, subunit
LCH17_19740	COG2814	Major facilitator Superfamily
LCH17_19745	COG0656	L-ascorbic acid biosynthetic process
LCH17_19765	COG0583	DNA-binding transcription factor activity
LCH17_19770	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LCH17_19775	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LCH17_19780	COG2271	Major facilitator Superfamily
LCH17_19785	COG1349	DNA-binding transcription factor activity
LCH17_19800	COG0584	glycerophosphoryl diester phosphodiesterase
LCH17_19805	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LCH17_19810	COG1605	Chorismate mutase
LCH17_19810	COG0287	Prephenate dehydrogenase
LCH17_19815	COG0583	DNA-binding transcription factor activity
LCH17_19820	COG3085	chromosome segregation
LCH17_19825	COG4574	serine-type endopeptidase inhibitor activity
LCH17_19845	COG1770	oligopeptidase
LCH17_19850	COG4771	TonB-dependent receptor
LCH17_19855	COG3083	sulfuric ester hydrolase activity
LCH17_19860	COG3082	Protein of unknown function (DUF1414)
LCH17_19865	COG3081	Nucleoid-associated protein
LCH17_19875	COG1175	transmembrane transport
LCH17_19880	COG3833	ABC-type maltose transport systems, permease component
LCH17_19885	COG3842	ATPase activity
LCH17_19910	COG0425	Belongs to the sulfur carrier protein TusA family
LCH17_19915	COG4783	chaperone-mediated protein folding
LCH17_19925	COG1393	Belongs to the ArsC family
LCH17_19945	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LCH17_19950	COG2431	L-lysine efflux transmembrane transporter activity
LCH17_19960	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LCH17_19980	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LCH17_19990	COG0446	pyridine nucleotide-disulphide oxidoreductase
LCH17_19995	COG2373	Large extracellular alpha-helical protein
LCH17_20000	COG4953	penicillin-binding protein 1C
LCH17_20010	COG0301	tRNA thio-modification
LCH17_20010	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LCH17_20030	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LCH17_20060	COG1083	cytidylyl-transferase
LCH17_20080	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LCH17_20085	COG2089	acid synthase
LCH17_20095	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LCH17_20115	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LCH17_20135	COG0483	inositol monophosphate 1-phosphatase activity
LCH17_20145	COG0625	glutathione transferase activity
LCH17_20150	COG2814	Major facilitator Superfamily
LCH17_20170	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LCH17_20175	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LCH17_20180	COG0404	The glycine cleavage system catalyzes the degradation of glycine
LCH17_20185	COG0509	glycine decarboxylation via glycine cleavage system
LCH17_20190	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
LCH17_20190	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
LCH17_20220	COG0798	PFAM Bile acid sodium symporter
LCH17_20225	COG1393	Belongs to the ArsC family
LCH17_20245	COG3634	alkyl hydroperoxide reductase activity
LCH17_20255	COG0517	IMP dehydrogenase activity
LCH17_20260	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
LCH17_20265	COG0343	queuine tRNA-ribosyltransferase activity
LCH17_20270	COG1862	Preprotein translocase
LCH17_20275	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LCH17_20280	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LCH17_20295	COG0826	peptidase U32
LCH17_20300	COG0826	peptidase U32
LCH17_20305	COG3154	lipid carrier protein
LCH17_20325	COG1104	cysteine desulfurase activity
LCH17_20330	COG0822	iron-sulfur transferase activity
LCH17_20340	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
LCH17_20345	COG0443	Heat shock 70 kDa protein
LCH17_20350	COG0633	Ferredoxin
LCH17_20360	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LCH17_20365	COG0105	UTP biosynthetic process
LCH17_20370	COG0820	rRNA (adenine-C2-)-methyltransferase activity
LCH17_20385	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
LCH17_20390	COG0124	histidyl-tRNA synthetase
LCH17_20395	COG2976	Protein conserved in bacteria
LCH17_20400	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LCH17_20405	COG1160	GTP binding
LCH17_20410	COG1645	bacterial-type flagellum-dependent swarming motility
LCH17_20415	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
LCH17_20420	COG0047	phosphoribosylformylglycinamidine synthase activity
LCH17_20420	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LCH17_20425	COG1007	ATP synthesis coupled electron transport
LCH17_20430	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LCH17_20440	COG0713	ATP synthesis coupled electron transport
LCH17_20445	COG0839	Belongs to the complex I subunit 6 family
LCH17_20450	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LCH17_20455	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
LCH17_20460	COG1034	ATP synthesis coupled electron transport
LCH17_20475	COG0649	NAD binding
LCH17_20475	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LCH17_20480	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LCH17_20485	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LCH17_20490	COG1360	Flagellar Motor Protein
LCH17_20495	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LCH17_20510	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
LCH17_20530	COG0724	RNA recognition motif
LCH17_20535	COG4989	oxidoreductase activity
LCH17_20560	COG3437	response regulator, receiver
LCH17_20565	COG0583	DNA-binding transcription factor activity
LCH17_20575	COG5001	Diguanylate cyclase
LCH17_20575	COG3300	MHYT domain
LCH17_20580	COG0778	Nitroreductase
LCH17_20600	COG0583	DNA-binding transcription factor activity
LCH17_20610	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LCH17_20615	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
LCH17_20620	COG0539	negative regulation of cytoplasmic translation
LCH17_20625	COG0776	regulation of translation
LCH17_20635	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
LCH17_20655	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
LCH17_20660	COG0602	queuosine metabolic process
LCH17_20665	COG3530	Putative quorum-sensing-regulated virulence factor
LCH17_20670	COG2096	Adenosyltransferase
LCH17_20675	COG2916	Histone family protein nucleoid-structuring protein H-NS
LCH17_20680	COG1757	Na H antiporter
LCH17_20685	COG1435	thymidine kinase activity
LCH17_20715	COG3501	Rhs element vgr protein
LCH17_20790	COG3829	transcription factor binding
LCH17_20850	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LCH17_20855	COG1278	Cold shock
LCH17_20860	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
LCH17_20865	COG0542	response to heat
LCH17_20870	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LCH17_20875	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
LCH17_20880	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
LCH17_20885	COG3134	Outer membrane lipoprotein
LCH17_20890	COG3706	GGDEF domain
LCH17_20895	COG0492	ferredoxin-NADP+ reductase activity
LCH17_20900	COG0686	Belongs to the AlaDH PNT family
LCH17_20910	COG0531	amino acid
LCH17_20910	COG1674	ftsk spoiiie
LCH17_20915	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
LCH17_20920	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LCH17_20925	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LCH17_20930	COG1286	toxin biosynthetic process
LCH17_20935	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LCH17_20945	COG4172	Belongs to the ABC transporter superfamily
LCH17_20955	COG4171	peptide transport system, permease
LCH17_20960	COG4168	peptide transport system, permease
LCH17_20970	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
LCH17_20975	COG1842	Phage shock protein A
LCH17_20990	COG3106	COG3106 Predicted ATPase
LCH17_20995	COG3768	UPF0283 membrane protein
LCH17_21020	COG2199	diguanylate cyclase activity
LCH17_21025	COG2885	chlorophyll binding
LCH17_21030	COG0861	Integral membrane protein TerC family
LCH17_21045	COG1022	Amp-dependent synthetase and ligase
LCH17_21050	COG0295	cytidine deaminase activity
LCH17_21055	COG1346	cytolysis
LCH17_21060	COG1380	Effector of murein hydrolase LrgA
LCH17_21065	COG3345	alpha-galactosidase
LCH17_21075	COG2925	Exonuclease
LCH17_21080	COG2160	L-arabinose isomerase activity
LCH17_21090	COG1069	ribulokinase activity
LCH17_21095	COG1879	ABC-type sugar transport system periplasmic component
LCH17_21105	COG1172	Belongs to the binding-protein-dependent transport system permease family
LCH17_21115	COG0583	DNA-binding transcription factor activity
LCH17_21125	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LCH17_21130	COG0254	rRNA binding
LCH17_21145	COG1451	nucleotide metabolic process
LCH17_21160	COG3069	C4-dicarboxylate transmembrane transporter activity
LCH17_21170	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LCH17_21170	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
LCH17_21175	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LCH17_21200	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
LCH17_21205	COG1053	succinate dehydrogenase
LCH17_21215	COG0567	Dehydrogenase, E1 component
LCH17_21220	COG0508	dehydrogenase complex catalyzes the overall conversion of
LCH17_21225	COG0045	succinate-CoA ligase (ADP-forming) activity
LCH17_21230	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LCH17_21235	COG2983	Belongs to the UPF0260 family
LCH17_21240	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LCH17_21250	COG3842	ATPase activity
LCH17_21255	COG1840	ABC-type Fe3 transport system, periplasmic component
LCH17_21265	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
LCH17_21270	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LCH17_21275	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LCH17_21280	COG1882	Formate acetyltransferase
LCH17_21285	COG2116	formate transmembrane transporter activity
LCH17_21290	COG1944	ATP diphosphatase activity
LCH17_21300	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LCH17_21305	COG0612	Peptidase, M16
LCH17_21320	COG2910	NAD(P)H-binding
LCH17_21325	COG0583	DNA-binding transcription factor activity
LCH17_21335	COG4977	sequence-specific DNA binding
LCH17_21340	COG4774	siderophore transport
LCH17_21355	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LCH17_21380	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LCH17_21385	COG3046	protein related to deoxyribodipyrimidine photolyase
LCH17_21395	COG3033	Beta-eliminating lyase
LCH17_21410	COG4235	cytochrome complex assembly
LCH17_21410	COG3088	subunit of a heme lyase
LCH17_21415	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LCH17_21420	COG1138	Cytochrome C-type biogenesis protein
LCH17_21425	COG3301	Polysulphide reductase, NrfD
LCH17_21430	COG0437	4 iron, 4 sulfur cluster binding
LCH17_21435	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
LCH17_21455	COG0247	lactate metabolic process
LCH17_21460	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
LCH17_21465	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LCH17_21470	COG3012	SEC-C Motif Domain Protein
LCH17_21475	COG0840	transmembrane signaling receptor activity
LCH17_21480	COG1940	carbohydrate kinase activity
LCH17_21480	COG1846	Transcriptional regulator
LCH17_21485	COG3290	protein histidine kinase activity
LCH17_21490	COG4565	transcriptional regulatory protein
LCH17_21510	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
LCH17_21515	COG0569	domain protein
LCH17_21515	COG2985	domain, Protein
LCH17_21525	COG0556	nucleotide-excision repair
LCH17_21535	COG0586	Pfam SNARE associated Golgi protein
LCH17_21540	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
LCH17_21545	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LCH17_21550	COG2186	Transcriptional regulator
LCH17_21555	COG2719	SpoVR family
LCH17_21565	COG2766	serine protein kinase
LCH17_21570	COG0514	ATP-dependent DNA helicase (RecQ)
LCH17_21575	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
LCH17_21580	COG0814	amino acid
LCH17_21610	COG0058	SHG alpha-glucan phosphorylase activity
LCH17_21615	COG0471	metal ion transport
LCH17_21620	COG3118	belongs to the thioredoxin family
LCH17_21630	COG1132	(ABC) transporter
LCH17_21635	COG1132	(ABC) transporter
LCH17_21645	COG2501	S4 domain
LCH17_21655	COG3243	poly(R)-hydroxyalkanoic acid synthase
LCH17_21680	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
LCH17_21685	COG2329	Antibiotic biosynthesis monooxygenase
LCH17_21715	COG1742	UPF0060 membrane protein
LCH17_21725	COG0456	acetyltransferase
LCH17_21730	COG0513	Belongs to the DEAD box helicase family
LCH17_21735	COG0386	Belongs to the glutathione peroxidase family
LCH17_21745	COG1181	Belongs to the D-alanine--D-alanine ligase family
LCH17_21755	COG3148	PFAM DTW domain containing protein
LCH17_21760	COG0730	response to heat
LCH17_21765	COG0583	DNA-binding transcription factor activity
LCH17_21780	COG3593	DNA synthesis involved in DNA repair
LCH17_21840	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LCH17_21845	COG1011	Hydrolase
LCH17_21850	COG1473	amidohydrolase
LCH17_21855	COG0205	6-phosphofructokinase activity
LCH17_21865	COG1434	Gram-negative-bacterium-type cell wall biogenesis
LCH17_21870	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LCH17_21880	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
LCH17_21885	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
LCH17_21905	COG0242	peptide deformylase activity
LCH17_21940	COG0384	phenazine biosynthesis protein PhzF
LCH17_21950	COG2824	Alkylphosphonate utilization operon protein PhnA
LCH17_21975	COG0406	alpha-ribazole phosphatase activity
LCH17_21980	COG3706	GGDEF domain
LCH17_21990	COG2840	Smr protein MutS2
LCH17_21995	COG2890	protein-(glutamine-N5) methyltransferase activity
LCH17_22000	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LCH17_22010	COG0513	Belongs to the DEAD box helicase family
LCH17_22015	COG5654	RES domain protein
LCH17_22025	COG0814	amino acid
LCH17_22030	COG1609	Transcriptional regulator
LCH17_22035	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LCH17_22035	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LCH17_22040	COG1105	Belongs to the carbohydrate kinase PfkB family
LCH17_22045	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LCH17_22045	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LCH17_22045	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
LCH17_22050	COG2140	Oxalate decarboxylase
LCH17_22055	COG1609	Transcriptional regulator
LCH17_22070	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
LCH17_22070	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LCH17_22075	COG3715	PTS system
LCH17_22080	COG3716	PTS system mannose fructose sorbose family IID component
LCH17_22085	COG2942	2-epimerase
LCH17_22090	COG3313	Fe-S protein
LCH17_22095	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
LCH17_22100	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LCH17_22105	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LCH17_22110	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LCH17_22120	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LCH17_22145	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LCH17_22150	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LCH17_22155	COG0291	Belongs to the bacterial ribosomal protein bL35 family
LCH17_22160	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LCH17_22365	COG2916	Histone family protein nucleoid-structuring protein H-NS
LCH17_22435	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LCH17_22525	COG4969	Belongs to the N-Me-Phe pilin family
LCH17_22610	COG3451	type IV secretory pathway VirB4
LCH17_22625	COG4962	Type ii secretion system protein e
LCH17_22635	COG0629	single-stranded DNA binding
LCH17_22665	COG2026	Addiction module toxin, RelE StbE family
LCH17_22670	COG3077	Addiction module antitoxin, RelB DinJ family