AhyD4_00090	PWY-4081	glutathione redox reactions I
AhyD4_00140	PWY-1042	glycolysis IV (plant cytosol)
AhyD4_00140	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AhyD4_00140	PWY-5484	glycolysis II (from fructose 6-phosphate)
AhyD4_00140	PWY-5723	Rubisco shunt
AhyD4_00140	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AhyD4_00140	PWY-6886	1-butanol autotrophic biosynthesis
AhyD4_00140	PWY-6901	superpathway of glucose and xylose degradation
AhyD4_00140	PWY-7003	glycerol degradation to butanol
AhyD4_00140	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AhyD4_00140	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AhyD4_00200	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AhyD4_00210	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AhyD4_00210	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
AhyD4_00250	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AhyD4_00250	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AhyD4_00250	PWY-5989	stearate biosynthesis II (bacteria and plants)
AhyD4_00250	PWY-6113	superpathway of mycolate biosynthesis
AhyD4_00250	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AhyD4_00250	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AhyD4_00250	PWY-7663	gondoate biosynthesis (anaerobic)
AhyD4_00250	PWY-7664	oleate biosynthesis IV (anaerobic)
AhyD4_00250	PWY-7858	AhyD4_00250
AhyD4_00250	PWYG-321	mycolate biosynthesis
AhyD4_00340	PWY-6123	inosine-5'-phosphate biosynthesis I
AhyD4_00340	PWY-7234	inosine-5'-phosphate biosynthesis III
AhyD4_00365	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AhyD4_00365	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AhyD4_00660	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AhyD4_00680	PWY-7378	aminopropanol phosphate biosynthesis II
AhyD4_00740	PWY-5686	UMP biosynthesis
AhyD4_00740	PWY-7790	AhyD4_00740
AhyD4_00740	PWY-7791	AhyD4_00740
AhyD4_00795	PWY-5381	pyridine nucleotide cycling (plants)
AhyD4_00830	PWY-5101	L-isoleucine biosynthesis II
AhyD4_00830	PWY-5103	L-isoleucine biosynthesis III
AhyD4_00830	PWY-5104	L-isoleucine biosynthesis IV
AhyD4_00830	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AhyD4_00830	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AhyD4_00830	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AhyD4_00830	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AhyD4_00840	PWY-5057	L-valine degradation II
AhyD4_00840	PWY-5076	L-leucine degradation III
AhyD4_00840	PWY-5078	L-isoleucine degradation II
AhyD4_00840	PWY-5101	L-isoleucine biosynthesis II
AhyD4_00840	PWY-5103	L-isoleucine biosynthesis III
AhyD4_00840	PWY-5104	L-isoleucine biosynthesis IV
AhyD4_00840	PWY-5108	L-isoleucine biosynthesis V
AhyD4_00840	PWY-7767	AhyD4_00840
AhyD4_00845	PWY-5101	L-isoleucine biosynthesis II
AhyD4_00845	PWY-5103	L-isoleucine biosynthesis III
AhyD4_00845	PWY-5104	L-isoleucine biosynthesis IV
AhyD4_00845	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AhyD4_00915	PWY-842	starch degradation I
AhyD4_00960	PWY-381	nitrate reduction II (assimilatory)
AhyD4_00960	PWY-5675	nitrate reduction V (assimilatory)
AhyD4_00960	PWY-6549	L-glutamine biosynthesis III
AhyD4_00960	PWY-6963	ammonia assimilation cycle I
AhyD4_00960	PWY-6964	ammonia assimilation cycle II
AhyD4_01055	PWY-5194	siroheme biosynthesis
AhyD4_01055	PWY-5196	factor 430 biosynthesis
AhyD4_01055	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AhyD4_01070	PWY-6683	sulfate reduction III (assimilatory)
AhyD4_01120	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AhyD4_01130	PWY-6317	galactose degradation I (Leloir pathway)
AhyD4_01135	PWY-3821	galactose degradation III
AhyD4_01135	PWY-6317	galactose degradation I (Leloir pathway)
AhyD4_01135	PWY-6527	stachyose degradation
AhyD4_01140	PWY-6317	galactose degradation I (Leloir pathway)
AhyD4_01140	PWY-6527	stachyose degradation
AhyD4_01145	PWY-3821	galactose degradation III
AhyD4_01145	PWY-6317	galactose degradation I (Leloir pathway)
AhyD4_01145	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AhyD4_01145	PWY-6527	stachyose degradation
AhyD4_01145	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AhyD4_01145	PWY-7344	UDP-D-galactose biosynthesis
AhyD4_01155	PWY-6807	xyloglucan degradation II (exoglucanase)
AhyD4_01190	PWY-4981	L-proline biosynthesis II (from arginine)
AhyD4_01200	PWY-4981	L-proline biosynthesis II (from arginine)
AhyD4_01200	PWY-4984	urea cycle
AhyD4_01200	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AhyD4_01220	PWY-5686	UMP biosynthesis
AhyD4_01220	PWY-7790	AhyD4_01220
AhyD4_01220	PWY-7791	AhyD4_01220
AhyD4_01235	PWY-3181	L-tryptophan degradation VI (via tryptamine)
AhyD4_01235	PWY-5290	secologanin and strictosidine biosynthesis
AhyD4_01235	PWY-5473	hydroxycinnamic acid serotonin amides biosynthesis
AhyD4_01235	PWY-5669	phosphatidylethanolamine biosynthesis I
AhyD4_01235	PWY-581	indole-3-acetate biosynthesis II
AhyD4_01235	PWY-5877	beta-carboline biosynthesis
AhyD4_01235	PWY-6307	L-tryptophan degradation X (mammalian, via tryptamine)
AhyD4_01235	PWY-6326	camptothecin biosynthesis
AhyD4_01235	PWY-7936	AhyD4_01235
AhyD4_01350	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AhyD4_01350	PWY-6148	tetrahydromethanopterin biosynthesis
AhyD4_01350	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AhyD4_01350	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AhyD4_01350	PWY-7852	AhyD4_01350
AhyD4_01350	PWY-7853	AhyD4_01350
AhyD4_01450	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AhyD4_01450	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AhyD4_01450	PWY-7953	AhyD4_01450
AhyD4_01455	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AhyD4_01455	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AhyD4_01460	PWY-3961	phosphopantothenate biosynthesis II
AhyD4_01635	PWY-6349	CDP-archaeol biosynthesis
AhyD4_01650	PWY-43	putrescine biosynthesis II
AhyD4_01915	PWY-2201	folate transformations I
AhyD4_01915	PWY-3841	folate transformations II
AhyD4_01965	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AhyD4_01965	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AhyD4_01965	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AhyD4_01965	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AhyD4_01980	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AhyD4_01980	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AhyD4_01980	PWY-7953	AhyD4_01980
AhyD4_02020	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AhyD4_02020	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AhyD4_02070	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AhyD4_02070	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AhyD4_02070	PWY-7242	D-fructuronate degradation
AhyD4_02070	PWY-7310	D-glucosaminate degradation
AhyD4_02070	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AhyD4_02075	PWY-7310	D-glucosaminate degradation
AhyD4_02140	PWY-3781	aerobic respiration I (cytochrome c)
AhyD4_02140	PWY-6692	Fe(II) oxidation
AhyD4_02140	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
AhyD4_02140	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AhyD4_02210	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AhyD4_02210	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AhyD4_02220	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AhyD4_02220	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AhyD4_02220	PWY-7953	AhyD4_02220
AhyD4_02225	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AhyD4_02225	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AhyD4_02225	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AhyD4_02230	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AhyD4_02230	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AhyD4_02235	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AhyD4_02235	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AhyD4_02235	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AhyD4_02235	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AhyD4_02240	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AhyD4_02240	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AhyD4_02240	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AhyD4_02240	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AhyD4_02245	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AhyD4_02245	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AhyD4_02245	PWY-7953	AhyD4_02245
AhyD4_02285	PWY-6502	oxidized GTP and dGTP detoxification
AhyD4_02300	PWY-7851	AhyD4_02300
AhyD4_02325	PWY-5316	nicotine biosynthesis
AhyD4_02325	PWY-5381	pyridine nucleotide cycling (plants)
AhyD4_02325	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AhyD4_02325	PWY-7342	superpathway of nicotine biosynthesis
AhyD4_02345	PWY-6891	thiazole biosynthesis II (Bacillus)
AhyD4_02345	PWY-6892	thiazole biosynthesis I (E. coli)
AhyD4_02345	PWY-7560	methylerythritol phosphate pathway II
AhyD4_02355	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AhyD4_02355	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AhyD4_02385	PWY-5747	2-methylcitrate cycle II
AhyD4_02425	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AhyD4_02425	PWY-6148	tetrahydromethanopterin biosynthesis
AhyD4_02425	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AhyD4_02425	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AhyD4_02425	PWY-7852	AhyD4_02425
AhyD4_02425	PWY-7853	AhyD4_02425
AhyD4_02430	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AhyD4_02430	PWY-6148	tetrahydromethanopterin biosynthesis
AhyD4_02430	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AhyD4_02430	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AhyD4_02650	PWY-622	starch biosynthesis
AhyD4_02655	PWY-622	starch biosynthesis
AhyD4_02655	PWY-7902	AhyD4_02655
AhyD4_02665	PWY-2941	L-lysine biosynthesis II
AhyD4_02665	PWY-2942	L-lysine biosynthesis III
AhyD4_02665	PWY-5097	L-lysine biosynthesis VI
AhyD4_02795	PWY-5350	thiosulfate disproportionation III (rhodanese)
AhyD4_02795	PWY-7927	AhyD4_02795
AhyD4_02870	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AhyD4_02960	PWY-5667	CDP-diacylglycerol biosynthesis I
AhyD4_02960	PWY-5981	CDP-diacylglycerol biosynthesis III
AhyD4_02960	PWY-6453	stigma estolide biosynthesis
AhyD4_02960	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AhyD4_02960	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AhyD4_02960	PWY-7587	oleate biosynthesis III (cyanobacteria)
AhyD4_02960	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
AhyD4_02960	PWY-7782	AhyD4_02960
AhyD4_03105	PWY-2941	L-lysine biosynthesis II
AhyD4_03105	PWY-2942	L-lysine biosynthesis III
AhyD4_03105	PWY-5097	L-lysine biosynthesis VI
AhyD4_03105	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AhyD4_03105	PWY-6559	spermidine biosynthesis II
AhyD4_03105	PWY-6562	norspermidine biosynthesis
AhyD4_03105	PWY-7153	grixazone biosynthesis
AhyD4_03105	PWY-7977	AhyD4_03105
AhyD4_03265	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AhyD4_03270	PWY-7181	pyrimidine deoxyribonucleosides degradation
AhyD4_03275	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AhyD4_03280	PWY-4202	arsenate detoxification I (glutaredoxin)
AhyD4_03280	PWY-5532	adenosine nucleotides degradation IV
AhyD4_03280	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AhyD4_03280	PWY-6608	guanosine nucleotides degradation III
AhyD4_03280	PWY-6609	adenine and adenosine salvage III
AhyD4_03280	PWY-6611	adenine and adenosine salvage V
AhyD4_03280	PWY-6620	guanine and guanosine salvage
AhyD4_03280	PWY-6627	salinosporamide A biosynthesis
AhyD4_03280	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AhyD4_03280	PWY-7179	purine deoxyribonucleosides degradation I
AhyD4_03280	PWY-7179-1	purine deoxyribonucleosides degradation
AhyD4_03390	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AhyD4_03395	PWY-3341	L-proline biosynthesis III
AhyD4_03395	PWY-4981	L-proline biosynthesis II (from arginine)
AhyD4_03395	PWY-6344	L-ornithine degradation II (Stickland reaction)
AhyD4_03490	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
AhyD4_03590	PWY-5316	nicotine biosynthesis
AhyD4_03590	PWY-7342	superpathway of nicotine biosynthesis
AhyD4_03600	PWY-1042	glycolysis IV (plant cytosol)
AhyD4_03600	PWY-5484	glycolysis II (from fructose 6-phosphate)
AhyD4_03600	PWY-6901	superpathway of glucose and xylose degradation
AhyD4_03600	PWY-7003	glycerol degradation to butanol
AhyD4_03605	PWY-5941	glycogen degradation II (eukaryotic)
AhyD4_03605	PWY-6724	starch degradation II
AhyD4_03605	PWY-6737	starch degradation V
AhyD4_03605	PWY-7238	sucrose biosynthesis II
AhyD4_03610	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AhyD4_03610	PWY-622	starch biosynthesis
AhyD4_03610	PWY-7900	AhyD4_03610
AhyD4_03740	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AhyD4_03740	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AhyD4_03760	PWY-5482	pyruvate fermentation to acetate II
AhyD4_03760	PWY-5485	pyruvate fermentation to acetate IV
AhyD4_03760	PWY-5497	purine nucleobases degradation II (anaerobic)
AhyD4_03845	PWY-5194	siroheme biosynthesis
AhyD4_03845	PWY-5196	factor 430 biosynthesis
AhyD4_03845	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AhyD4_03850	PWY-5278	sulfite oxidation III
AhyD4_03850	PWY-5340	sulfate activation for sulfonation
AhyD4_03850	PWY-6683	sulfate reduction III (assimilatory)
AhyD4_03850	PWY-6932	selenate reduction
AhyD4_03855	PWY-5278	sulfite oxidation III
AhyD4_03855	PWY-5340	sulfate activation for sulfonation
AhyD4_03855	PWY-6683	sulfate reduction III (assimilatory)
AhyD4_03855	PWY-6932	selenate reduction
AhyD4_03865	PWY-5340	sulfate activation for sulfonation
AhyD4_03935	PWY-7805	AhyD4_03935
AhyD4_03935	PWY-7807	AhyD4_03935
AhyD4_03940	PWY-7883	AhyD4_03940
AhyD4_03955	PWY-6599	guanine and guanosine salvage II
AhyD4_03955	PWY-6609	adenine and adenosine salvage III
AhyD4_03955	PWY-6610	adenine and adenosine salvage IV
AhyD4_03955	PWY-6620	guanine and guanosine salvage
AhyD4_04000	PWY-6654	phosphopantothenate biosynthesis III
AhyD4_04005	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AhyD4_04005	PWY-6148	tetrahydromethanopterin biosynthesis
AhyD4_04005	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AhyD4_04005	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AhyD4_04005	PWY-7852	AhyD4_04005
AhyD4_04005	PWY-7853	AhyD4_04005
AhyD4_04040	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AhyD4_04040	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AhyD4_04040	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AhyD4_04040	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AhyD4_04090	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AhyD4_04190	PWY-3801	sucrose degradation II (sucrose synthase)
AhyD4_04190	PWY-6527	stachyose degradation
AhyD4_04190	PWY-7238	sucrose biosynthesis II
AhyD4_04190	PWY-7343	UDP-glucose biosynthesis
AhyD4_04190	PWY-7817	AhyD4_04190
AhyD4_04295	PWY-5350	thiosulfate disproportionation III (rhodanese)
AhyD4_04295	PWY-7927	AhyD4_04295
AhyD4_04365	PWY-5669	phosphatidylethanolamine biosynthesis I
AhyD4_04425	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AhyD4_04460	PWY-6855	chitin degradation I (archaea)
AhyD4_04460	PWY-6902	chitin degradation II
AhyD4_04460	PWY-7822	AhyD4_04460
AhyD4_04545	PWY-3341	L-proline biosynthesis III
AhyD4_04545	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AhyD4_04550	PWY-3341	L-proline biosynthesis III
AhyD4_04550	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AhyD4_04580	PWY-5194	siroheme biosynthesis
AhyD4_04580	PWY-5196	factor 430 biosynthesis
AhyD4_04580	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AhyD4_04605	PWY-6683	sulfate reduction III (assimilatory)
AhyD4_04620	PWY-6019	pseudouridine degradation
AhyD4_04625	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AhyD4_04625	PWY-5743	3-hydroxypropanoate cycle
AhyD4_04625	PWY-5744	glyoxylate assimilation
AhyD4_04625	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AhyD4_04625	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AhyD4_04625	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AhyD4_04625	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AhyD4_04685	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AhyD4_04685	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AhyD4_04685	PWY-5989	stearate biosynthesis II (bacteria and plants)
AhyD4_04685	PWY-5994	palmitate biosynthesis I (animals and fungi)
AhyD4_04685	PWY-6113	superpathway of mycolate biosynthesis
AhyD4_04685	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AhyD4_04685	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AhyD4_04685	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AhyD4_04685	PWY-7663	gondoate biosynthesis (anaerobic)
AhyD4_04685	PWY-7664	oleate biosynthesis IV (anaerobic)
AhyD4_04685	PWY-7858	AhyD4_04685
AhyD4_04685	PWYG-321	mycolate biosynthesis
AhyD4_04730	PWY-5367	petroselinate biosynthesis
AhyD4_04730	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AhyD4_04730	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AhyD4_04730	PWY-5989	stearate biosynthesis II (bacteria and plants)
AhyD4_04730	PWY-5994	palmitate biosynthesis I (animals and fungi)
AhyD4_04730	PWY-6113	superpathway of mycolate biosynthesis
AhyD4_04730	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AhyD4_04730	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AhyD4_04730	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AhyD4_04730	PWY-7663	gondoate biosynthesis (anaerobic)
AhyD4_04730	PWY-7664	oleate biosynthesis IV (anaerobic)
AhyD4_04730	PWY-7858	AhyD4_04730
AhyD4_04730	PWYG-321	mycolate biosynthesis
AhyD4_04765	PWY-3841	folate transformations II
AhyD4_04765	PWY-6614	tetrahydrofolate biosynthesis
AhyD4_04790	PWY-6683	sulfate reduction III (assimilatory)
AhyD4_04795	PWY-6683	sulfate reduction III (assimilatory)
AhyD4_04835	PWY-1042	glycolysis IV (plant cytosol)
AhyD4_04835	PWY-5484	glycolysis II (from fructose 6-phosphate)
AhyD4_04835	PWY-6901	superpathway of glucose and xylose degradation
AhyD4_04835	PWY-7003	glycerol degradation to butanol
AhyD4_04915	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AhyD4_04915	PWY-6416	quinate degradation II
AhyD4_04915	PWY-6707	gallate biosynthesis
AhyD4_04920	PWY-5108	L-isoleucine biosynthesis V
AhyD4_04920	PWY-5132	humulone biosynthesis
AhyD4_04920	PWY-5133	cohumulone biosynthesis
AhyD4_04920	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AhyD4_04920	PWY-7118	chitin degradation to ethanol
AhyD4_04920	PWY-7857	AhyD4_04920
AhyD4_04955	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AhyD4_04965	PWY-1622	formaldehyde assimilation I (serine pathway)
AhyD4_04965	PWY-181	photorespiration
AhyD4_04965	PWY-2161	folate polyglutamylation
AhyD4_04965	PWY-2201	folate transformations I
AhyD4_04965	PWY-3661	glycine betaine degradation I
AhyD4_04965	PWY-3661-1	glycine betaine degradation II (mammalian)
AhyD4_04965	PWY-3841	folate transformations II
AhyD4_04965	PWY-5497	purine nucleobases degradation II (anaerobic)
AhyD4_04985	PWY-7991	AhyD4_04985
AhyD4_04990	PWY-6167	flavin biosynthesis II (archaea)
AhyD4_04990	PWY-6168	flavin biosynthesis III (fungi)
AhyD4_04990	PWY-7980	AhyD4_04990
AhyD4_04995	PWY-6167	flavin biosynthesis II (archaea)
AhyD4_04995	PWY-6168	flavin biosynthesis III (fungi)
AhyD4_04995	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AhyD4_04995	PWY-7991	AhyD4_04995
AhyD4_05005	PWY-6167	flavin biosynthesis II (archaea)
AhyD4_05005	PWY-6168	flavin biosynthesis III (fungi)
AhyD4_05015	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AhyD4_05015	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AhyD4_05015	PWY-6896	thiamin salvage I
AhyD4_05015	PWY-6897	thiamin salvage II
AhyD4_05020	PWY-5269	cardiolipin biosynthesis II
AhyD4_05020	PWY-5668	cardiolipin biosynthesis I
AhyD4_05020	PWY-7817	AhyD4_05020
AhyD4_05045	PWY-6891	thiazole biosynthesis II (Bacillus)
AhyD4_05045	PWY-6892	thiazole biosynthesis I (E. coli)
AhyD4_05045	PWY-7560	methylerythritol phosphate pathway II
AhyD4_05095	PWY-6614	tetrahydrofolate biosynthesis
AhyD4_05100	PWY-6749	CMP-legionaminate biosynthesis I
AhyD4_05105	PWY-1042	glycolysis IV (plant cytosol)
AhyD4_05105	PWY-5484	glycolysis II (from fructose 6-phosphate)
AhyD4_05105	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AhyD4_05105	PWY-7003	glycerol degradation to butanol
AhyD4_05180	PWY-5392	reductive TCA cycle II
AhyD4_05180	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AhyD4_05180	PWY-5690	TCA cycle II (plants and fungi)
AhyD4_05180	PWY-5913	TCA cycle VI (obligate autotrophs)
AhyD4_05180	PWY-6728	methylaspartate cycle
AhyD4_05180	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AhyD4_05180	PWY-7254	TCA cycle VII (acetate-producers)
AhyD4_05180	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AhyD4_05295	PWY-7805	AhyD4_05295
AhyD4_05295	PWY-7807	AhyD4_05295
AhyD4_05330	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AhyD4_05330	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AhyD4_05335	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AhyD4_05335	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AhyD4_05345	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AhyD4_05345	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AhyD4_05360	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AhyD4_05360	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AhyD4_05360	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AhyD4_05360	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AhyD4_05365	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AhyD4_05365	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AhyD4_05380	PWY-5381	pyridine nucleotide cycling (plants)
AhyD4_05380	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AhyD4_05380	PWY-7761	AhyD4_05380
AhyD4_05585	PWY-3781	aerobic respiration I (cytochrome c)
AhyD4_05585	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AhyD4_05585	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AhyD4_05585	PWY-5690	TCA cycle II (plants and fungi)
AhyD4_05585	PWY-6728	methylaspartate cycle
AhyD4_05585	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AhyD4_05585	PWY-7254	TCA cycle VII (acetate-producers)
AhyD4_05585	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AhyD4_05590	PWY-5392	reductive TCA cycle II
AhyD4_05590	PWY-5913	TCA cycle VI (obligate autotrophs)
AhyD4_05590	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AhyD4_05655	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AhyD4_05655	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AhyD4_05655	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AhyD4_05655	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AhyD4_05685	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AhyD4_05690	PWY-6164	3-dehydroquinate biosynthesis I
AhyD4_05705	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AhyD4_05705	PWY-5723	Rubisco shunt
AhyD4_05710	PWY-181	photorespiration
AhyD4_05725	PWY-5958	acridone alkaloid biosynthesis
AhyD4_05725	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AhyD4_05725	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AhyD4_05850	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AhyD4_05880	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AhyD4_05905	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AhyD4_05905	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AhyD4_05935	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AhyD4_05935	PWY-5723	Rubisco shunt
AhyD4_06005	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AhyD4_06005	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AhyD4_06010	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AhyD4_06010	PWY-5723	Rubisco shunt
AhyD4_06010	PWY-6891	thiazole biosynthesis II (Bacillus)
AhyD4_06010	PWY-6892	thiazole biosynthesis I (E. coli)
AhyD4_06010	PWY-6901	superpathway of glucose and xylose degradation
AhyD4_06010	PWY-7560	methylerythritol phosphate pathway II
AhyD4_06045	PWY-7883	AhyD4_06045
AhyD4_06075	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AhyD4_06140	PWY-6902	chitin degradation II
AhyD4_06140	PWY-7822	AhyD4_06140
AhyD4_06140	PWY-7883	AhyD4_06140
AhyD4_06150	PWY-6788	cellulose degradation II (fungi)
AhyD4_06250	PWY-6823	molybdenum cofactor biosynthesis
AhyD4_06255	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AhyD4_06255	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AhyD4_06380	PWY-1042	glycolysis IV (plant cytosol)
AhyD4_06380	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AhyD4_06380	PWY-5484	glycolysis II (from fructose 6-phosphate)
AhyD4_06380	PWY-5723	Rubisco shunt
AhyD4_06380	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AhyD4_06380	PWY-6886	1-butanol autotrophic biosynthesis
AhyD4_06380	PWY-6901	superpathway of glucose and xylose degradation
AhyD4_06380	PWY-7003	glycerol degradation to butanol
AhyD4_06380	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AhyD4_06380	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AhyD4_06400	PWY-4041	&gamma;-glutamyl cycle
AhyD4_06400	PWY-4061	glutathione-mediated detoxification I
AhyD4_06400	PWY-5826	hypoglycin biosynthesis
AhyD4_06400	PWY-6842	glutathione-mediated detoxification II
AhyD4_06400	PWY-7112	4-hydroxy-2-nonenal detoxification
AhyD4_06400	PWY-7559	glutathione degradation (DUG pathway - yeast)
AhyD4_06465	PWY-6936	seleno-amino acid biosynthesis
AhyD4_06480	PWY-4381	fatty acid biosynthesis initiation I
AhyD4_06560	PWY-2941	L-lysine biosynthesis II
AhyD4_06560	PWY-2942	L-lysine biosynthesis III
AhyD4_06560	PWY-5097	L-lysine biosynthesis VI
AhyD4_06560	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AhyD4_06560	PWY-6559	spermidine biosynthesis II
AhyD4_06560	PWY-6562	norspermidine biosynthesis
AhyD4_06560	PWY-7153	grixazone biosynthesis
AhyD4_06560	PWY-7977	AhyD4_06560
AhyD4_06565	PWY-702	L-methionine biosynthesis II
AhyD4_06575	PWY-2582	brassinosteroid biosynthesis II
AhyD4_06575	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AhyD4_06575	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AhyD4_06575	PWY-6948	sitosterol degradation to androstenedione
AhyD4_06575	PWY-699	brassinosteroid biosynthesis I
AhyD4_06575	PWY-7299	progesterone biosynthesis
AhyD4_06600	PWY-4202	arsenate detoxification I (glutaredoxin)
AhyD4_06600	PWY-5532	adenosine nucleotides degradation IV
AhyD4_06600	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AhyD4_06600	PWY-6608	guanosine nucleotides degradation III
AhyD4_06600	PWY-6609	adenine and adenosine salvage III
AhyD4_06600	PWY-6611	adenine and adenosine salvage V
AhyD4_06600	PWY-6620	guanine and guanosine salvage
AhyD4_06600	PWY-6627	salinosporamide A biosynthesis
AhyD4_06600	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AhyD4_06600	PWY-7179	purine deoxyribonucleosides degradation I
AhyD4_06600	PWY-7179-1	purine deoxyribonucleosides degradation
AhyD4_06690	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AhyD4_06690	PWY-6164	3-dehydroquinate biosynthesis I
AhyD4_06690	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AhyD4_06725	PWY-7805	AhyD4_06725
AhyD4_06725	PWY-7807	AhyD4_06725
AhyD4_06740	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AhyD4_06740	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AhyD4_06740	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AhyD4_06830	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AhyD4_06830	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AhyD4_06940	PWY-3781	aerobic respiration I (cytochrome c)
AhyD4_06940	PWY-4521	arsenite oxidation I (respiratory)
AhyD4_06940	PWY-6692	Fe(II) oxidation
AhyD4_06940	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AhyD4_06940	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
AhyD4_06980	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AhyD4_07105	PWY-5392	reductive TCA cycle II
AhyD4_07105	PWY-5537	pyruvate fermentation to acetate V
AhyD4_07105	PWY-5538	pyruvate fermentation to acetate VI
AhyD4_07105	PWY-5690	TCA cycle II (plants and fungi)
AhyD4_07105	PWY-5913	TCA cycle VI (obligate autotrophs)
AhyD4_07105	PWY-6728	methylaspartate cycle
AhyD4_07105	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AhyD4_07105	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AhyD4_07195	PWY-5958	acridone alkaloid biosynthesis
AhyD4_07195	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AhyD4_07195	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AhyD4_07200	PWY-5958	acridone alkaloid biosynthesis
AhyD4_07200	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AhyD4_07200	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AhyD4_07260	PWY-3221	dTDP-L-rhamnose biosynthesis II
AhyD4_07260	PWY-6808	dTDP-D-forosamine biosynthesis
AhyD4_07260	PWY-6942	dTDP-D-desosamine biosynthesis
AhyD4_07260	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AhyD4_07260	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AhyD4_07260	PWY-6974	dTDP-L-olivose biosynthesis
AhyD4_07260	PWY-6976	dTDP-L-mycarose biosynthesis
AhyD4_07260	PWY-7104	dTDP-L-megosamine biosynthesis
AhyD4_07260	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AhyD4_07260	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AhyD4_07260	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AhyD4_07260	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AhyD4_07260	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AhyD4_07260	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AhyD4_07260	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AhyD4_07260	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AhyD4_07260	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AhyD4_07260	PWY-7688	AhyD4_07260
AhyD4_07260	PWY-7814	AhyD4_07260
AhyD4_07265	PWY-3221	dTDP-L-rhamnose biosynthesis II
AhyD4_07265	PWY-6808	dTDP-D-forosamine biosynthesis
AhyD4_07265	PWY-6942	dTDP-D-desosamine biosynthesis
AhyD4_07265	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AhyD4_07265	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AhyD4_07265	PWY-6974	dTDP-L-olivose biosynthesis
AhyD4_07265	PWY-6976	dTDP-L-mycarose biosynthesis
AhyD4_07265	PWY-7104	dTDP-L-megosamine biosynthesis
AhyD4_07265	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AhyD4_07265	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AhyD4_07265	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AhyD4_07265	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AhyD4_07265	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AhyD4_07265	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AhyD4_07265	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AhyD4_07265	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AhyD4_07265	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AhyD4_07265	PWY-7688	AhyD4_07265
AhyD4_07265	PWY-7814	AhyD4_07265
AhyD4_07285	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
AhyD4_07285	PWY-5739	GDP-D-perosamine biosynthesis
AhyD4_07285	PWY-5740	GDP-L-colitose biosynthesis
AhyD4_07285	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AhyD4_07285	PWY-7573	GDP-mycosamine biosynthesis
AhyD4_07290	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AhyD4_07295	PWY-5659	GDP-mannose biosynthesis
AhyD4_07295	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AhyD4_07310	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AhyD4_07310	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AhyD4_07310	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AhyD4_07310	PWY-7290	<i>Escherichia coli</i> serotype O86 <i>O</i>-antigen biosynthesis
AhyD4_07310	PWY-7530	&beta;-D-galactosaminyl-(1&rarr;3)-<i>N</i>-acetyl-&alpha;-D-galactosamine biosynthesis
AhyD4_07310	PWY-7815	AhyD4_07310
AhyD4_07310	PWY-7816	AhyD4_07310
AhyD4_07310	PWY-7819	AhyD4_07310
AhyD4_07310	PWY-7905	AhyD4_07310
AhyD4_07320	PWY-3221	dTDP-L-rhamnose biosynthesis II
AhyD4_07320	PWY-6808	dTDP-D-forosamine biosynthesis
AhyD4_07320	PWY-6942	dTDP-D-desosamine biosynthesis
AhyD4_07320	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AhyD4_07320	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AhyD4_07320	PWY-6974	dTDP-L-olivose biosynthesis
AhyD4_07320	PWY-6976	dTDP-L-mycarose biosynthesis
AhyD4_07320	PWY-7104	dTDP-L-megosamine biosynthesis
AhyD4_07320	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AhyD4_07320	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AhyD4_07320	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AhyD4_07320	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AhyD4_07320	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AhyD4_07320	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AhyD4_07320	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AhyD4_07320	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AhyD4_07320	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AhyD4_07320	PWY-7688	AhyD4_07320
AhyD4_07320	PWY-7814	AhyD4_07320
AhyD4_07440	PWY-5480	pyruvate fermentation to ethanol I
AhyD4_07440	PWY-5485	pyruvate fermentation to acetate IV
AhyD4_07440	PWY-5493	reductive monocarboxylic acid cycle
AhyD4_07450	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AhyD4_07450	PWY-5723	Rubisco shunt
AhyD4_07610	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AhyD4_07610	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AhyD4_07615	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AhyD4_07615	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AhyD4_07615	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AhyD4_07620	PWY-7183	pyrimidine nucleobases salvage I
AhyD4_07635	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AhyD4_07640	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AhyD4_07640	PWY-7118	chitin degradation to ethanol
AhyD4_07640	PWY-7294	xylose degradation IV
AhyD4_07640	PWY-7295	L-arabinose degradation IV
AhyD4_07640	PWY-7854	AhyD4_07640
AhyD4_07760	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AhyD4_07760	PWY-5491	diethylphosphate degradation
AhyD4_07765	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AhyD4_07765	PWY-5491	diethylphosphate degradation
AhyD4_07805	PWY-5913	TCA cycle VI (obligate autotrophs)
AhyD4_07805	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AhyD4_07805	PWY-6638	sulfolactate degradation III
AhyD4_07805	PWY-6642	(<i>R</i>)-cysteate degradation
AhyD4_07805	PWY-6643	coenzyme M biosynthesis II
AhyD4_07805	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AhyD4_07805	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AhyD4_07805	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AhyD4_07975	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AhyD4_07990	PWY-5269	cardiolipin biosynthesis II
AhyD4_07990	PWY-5668	cardiolipin biosynthesis I
AhyD4_07990	PWY-7817	AhyD4_07990
AhyD4_08045	PWY-5642	2,4-dinitrotoluene degradation
AhyD4_08095	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AhyD4_08280	PWY-622	starch biosynthesis
AhyD4_08280	PWY-7902	AhyD4_08280
AhyD4_08315	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AhyD4_08315	PWY-6164	3-dehydroquinate biosynthesis I
AhyD4_08315	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AhyD4_08320	PWY-7039	phosphatidate metabolism, as a signaling molecule
AhyD4_08320	PWY-7817	AhyD4_08320
AhyD4_08335	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AhyD4_08335	PWY-5723	Rubisco shunt
AhyD4_08350	PWY-2941	L-lysine biosynthesis II
AhyD4_08350	PWY-2942	L-lysine biosynthesis III
AhyD4_08350	PWY-5097	L-lysine biosynthesis VI
AhyD4_08355	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AhyD4_08355	PWY-5686	UMP biosynthesis
AhyD4_08355	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AhyD4_08355	PWY-7790	AhyD4_08355
AhyD4_08355	PWY-7791	AhyD4_08355
AhyD4_08360	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AhyD4_08360	PWY-5686	UMP biosynthesis
AhyD4_08360	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AhyD4_08360	PWY-7790	AhyD4_08360
AhyD4_08360	PWY-7791	AhyD4_08360
AhyD4_08365	PWY-6871	3-methylbutanol biosynthesis
AhyD4_08535	PWY-5484	glycolysis II (from fructose 6-phosphate)
AhyD4_08535	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AhyD4_08595	PWY-2941	L-lysine biosynthesis II
AhyD4_08595	PWY-2942	L-lysine biosynthesis III
AhyD4_08595	PWY-5097	L-lysine biosynthesis VI
AhyD4_08595	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AhyD4_08595	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AhyD4_08595	PWY-6559	spermidine biosynthesis II
AhyD4_08595	PWY-6562	norspermidine biosynthesis
AhyD4_08595	PWY-7153	grixazone biosynthesis
AhyD4_08595	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AhyD4_08595	PWY-7977	AhyD4_08595
AhyD4_08610	PWY-4381	fatty acid biosynthesis initiation I
AhyD4_08610	PWY-5743	3-hydroxypropanoate cycle
AhyD4_08610	PWY-5744	glyoxylate assimilation
AhyD4_08610	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AhyD4_08610	PWY-6722	candicidin biosynthesis
AhyD4_08615	PWY-2161	folate polyglutamylation
AhyD4_08730	PWY-5692	allantoin degradation to glyoxylate II
AhyD4_08730	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
AhyD4_08745	PWY-6610	adenine and adenosine salvage IV
AhyD4_08805	PWY-5386	methylglyoxal degradation I
AhyD4_08860	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AhyD4_08860	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AhyD4_08860	PWY-5989	stearate biosynthesis II (bacteria and plants)
AhyD4_08860	PWY-6113	superpathway of mycolate biosynthesis
AhyD4_08860	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AhyD4_08860	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AhyD4_08860	PWY-7663	gondoate biosynthesis (anaerobic)
AhyD4_08860	PWY-7664	oleate biosynthesis IV (anaerobic)
AhyD4_08860	PWY-7858	AhyD4_08860
AhyD4_08860	PWYG-321	mycolate biosynthesis
AhyD4_08885	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AhyD4_08885	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AhyD4_08925	PWY-3162	L-tryptophan degradation V (side chain pathway)
AhyD4_08925	PWY-5057	L-valine degradation II
AhyD4_08925	PWY-5076	L-leucine degradation III
AhyD4_08925	PWY-5078	L-isoleucine degradation II
AhyD4_08925	PWY-5079	L-phenylalanine degradation III
AhyD4_08925	PWY-5082	L-methionine degradation III
AhyD4_08925	PWY-5480	pyruvate fermentation to ethanol I
AhyD4_08925	PWY-5486	pyruvate fermentation to ethanol II
AhyD4_08925	PWY-5751	phenylethanol biosynthesis
AhyD4_08925	PWY-6313	serotonin degradation
AhyD4_08925	PWY-6333	acetaldehyde biosynthesis I
AhyD4_08925	PWY-6342	noradrenaline and adrenaline degradation
AhyD4_08925	PWY-6587	pyruvate fermentation to ethanol III
AhyD4_08925	PWY-6802	salidroside biosynthesis
AhyD4_08925	PWY-6871	3-methylbutanol biosynthesis
AhyD4_08925	PWY-7013	L-1,2-propanediol degradation
AhyD4_08925	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AhyD4_08925	PWY-7118	chitin degradation to ethanol
AhyD4_08925	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AhyD4_08975	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AhyD4_08980	PWY-6825	phosphatidylcholine biosynthesis V
AhyD4_09000	PWY-5686	UMP biosynthesis
AhyD4_09000	PWY-7790	AhyD4_09000
AhyD4_09000	PWY-7791	AhyD4_09000
AhyD4_09120	PWY-5194	siroheme biosynthesis
AhyD4_09120	PWY-5196	factor 430 biosynthesis
AhyD4_09120	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AhyD4_09125	PWY-6683	sulfate reduction III (assimilatory)
AhyD4_09160	PWY-2941	L-lysine biosynthesis II
AhyD4_09160	PWY-2942	L-lysine biosynthesis III
AhyD4_09160	PWY-5097	L-lysine biosynthesis VI
AhyD4_09160	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AhyD4_09160	PWY-6559	spermidine biosynthesis II
AhyD4_09160	PWY-6562	norspermidine biosynthesis
AhyD4_09160	PWY-7153	grixazone biosynthesis
AhyD4_09160	PWY-7977	AhyD4_09160
AhyD4_09165	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AhyD4_09380	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AhyD4_09580	PWY-1881	formate oxidation to CO<sub>2</sub>
AhyD4_09580	PWY-5497	purine nucleobases degradation II (anaerobic)
AhyD4_09580	PWY-6696	oxalate degradation III
AhyD4_09580	PWY-7985	AhyD4_09580
AhyD4_09610	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AhyD4_09645	PWY-622	starch biosynthesis
AhyD4_09645	PWY-7902	AhyD4_09645
AhyD4_09660	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AhyD4_09660	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AhyD4_09660	PWY-6406	salicylate biosynthesis I
AhyD4_09680	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AhyD4_09700	PWY-6012	acyl carrier protein metabolism I
AhyD4_09700	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AhyD4_09700	PWY-6289	petrobactin biosynthesis
AhyD4_09765	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AhyD4_09770	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AhyD4_09770	PWY-6164	3-dehydroquinate biosynthesis I
AhyD4_09770	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AhyD4_09815	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AhyD4_09815	PWY-6596	adenosine nucleotides degradation I
AhyD4_09815	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AhyD4_09820	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AhyD4_09920	PWY-5484	glycolysis II (from fructose 6-phosphate)
AhyD4_10085	PWY-5074	mevalonate degradation
AhyD4_10100	PWY-4381	fatty acid biosynthesis initiation I
AhyD4_10100	PWY-5743	3-hydroxypropanoate cycle
AhyD4_10100	PWY-5744	glyoxylate assimilation
AhyD4_10100	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AhyD4_10100	PWY-6722	candicidin biosynthesis
AhyD4_10110	PWY-5642	2,4-dinitrotoluene degradation
AhyD4_10375	PWY-6167	flavin biosynthesis II (archaea)
AhyD4_10375	PWY-6168	flavin biosynthesis III (fungi)
AhyD4_10375	PWY-7980	AhyD4_10375
AhyD4_10440	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AhyD4_10440	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AhyD4_10440	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AhyD4_10440	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AhyD4_10485	PWY-5532	adenosine nucleotides degradation IV
AhyD4_10485	PWY-7181	pyrimidine deoxyribonucleosides degradation
AhyD4_10560	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AhyD4_10560	PWY-6435	4-hydroxybenzoate biosynthesis V
AhyD4_10560	PWY-6863	pyruvate fermentation to hexanol
AhyD4_10560	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AhyD4_10560	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AhyD4_10560	PWY-6948	sitosterol degradation to androstenedione
AhyD4_10560	PWY-7094	fatty acid salvage
AhyD4_10560	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
AhyD4_10560	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AhyD4_10560	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AhyD4_10560	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
AhyD4_10560	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AhyD4_10560	PWY-735	jasmonic acid biosynthesis
AhyD4_10560	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AhyD4_10560	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AhyD4_10560	PWY-7726	AhyD4_10560
AhyD4_10565	PWY-1361	benzoyl-CoA degradation I (aerobic)
AhyD4_10565	PWY-5109	2-methylbutanoate biosynthesis
AhyD4_10565	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AhyD4_10565	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AhyD4_10565	PWY-5177	glutaryl-CoA degradation
AhyD4_10565	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AhyD4_10565	PWY-6435	4-hydroxybenzoate biosynthesis V
AhyD4_10565	PWY-6583	pyruvate fermentation to butanol I
AhyD4_10565	PWY-6863	pyruvate fermentation to hexanol
AhyD4_10565	PWY-6883	pyruvate fermentation to butanol II
AhyD4_10565	PWY-6944	androstenedione degradation
AhyD4_10565	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AhyD4_10565	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AhyD4_10565	PWY-7007	methyl ketone biosynthesis
AhyD4_10565	PWY-7046	4-coumarate degradation (anaerobic)
AhyD4_10565	PWY-7094	fatty acid salvage
AhyD4_10565	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AhyD4_10565	PWY-735	jasmonic acid biosynthesis
AhyD4_10565	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AhyD4_10565	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AhyD4_10565	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AhyD4_10565	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AhyD4_10565	PWY-7726	AhyD4_10565
AhyD4_10565	PWY-7778	AhyD4_10565
AhyD4_10565	PWY-7779	AhyD4_10565
AhyD4_10600	PWY-5686	UMP biosynthesis
AhyD4_10600	PWY-7790	AhyD4_10600
AhyD4_10600	PWY-7791	AhyD4_10600
AhyD4_10670	PWY-5497	purine nucleobases degradation II (anaerobic)
AhyD4_10670	PWY-6606	guanosine nucleotides degradation II
AhyD4_10670	PWY-6608	guanosine nucleotides degradation III
AhyD4_10670	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AhyD4_10945	PWY-6605	adenine and adenosine salvage II
AhyD4_10945	PWY-6610	adenine and adenosine salvage IV
AhyD4_10945	PWY-7805	AhyD4_10945
AhyD4_10945	PWY-7807	AhyD4_10945
AhyD4_11100	PWY-6854	ethylene biosynthesis III (microbes)
AhyD4_11355	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AhyD4_11405	PWY-7193	pyrimidine ribonucleosides salvage I
AhyD4_11470	PWY-4381	fatty acid biosynthesis initiation I
AhyD4_11475	PWY-4381	fatty acid biosynthesis initiation I
AhyD4_11475	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AhyD4_11475	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AhyD4_11480	PWY-5367	petroselinate biosynthesis
AhyD4_11480	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AhyD4_11480	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AhyD4_11480	PWY-5989	stearate biosynthesis II (bacteria and plants)
AhyD4_11480	PWY-5994	palmitate biosynthesis I (animals and fungi)
AhyD4_11480	PWY-6113	superpathway of mycolate biosynthesis
AhyD4_11480	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AhyD4_11480	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AhyD4_11480	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AhyD4_11480	PWY-7663	gondoate biosynthesis (anaerobic)
AhyD4_11480	PWY-7664	oleate biosynthesis IV (anaerobic)
AhyD4_11480	PWY-7858	AhyD4_11480
AhyD4_11480	PWYG-321	mycolate biosynthesis
AhyD4_11495	PWY-6543	4-aminobenzoate biosynthesis
AhyD4_11505	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AhyD4_11505	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AhyD4_11505	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AhyD4_11505	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AhyD4_11505	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AhyD4_11505	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AhyD4_11550	PWY-5747	2-methylcitrate cycle II
AhyD4_11625	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AhyD4_11625	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AhyD4_11625	PWY-5989	stearate biosynthesis II (bacteria and plants)
AhyD4_11625	PWY-5994	palmitate biosynthesis I (animals and fungi)
AhyD4_11625	PWY-6113	superpathway of mycolate biosynthesis
AhyD4_11625	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AhyD4_11625	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AhyD4_11625	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AhyD4_11625	PWY-7663	gondoate biosynthesis (anaerobic)
AhyD4_11625	PWY-7664	oleate biosynthesis IV (anaerobic)
AhyD4_11625	PWY-7858	AhyD4_11625
AhyD4_11625	PWYG-321	mycolate biosynthesis
AhyD4_11655	PWY-5686	UMP biosynthesis
AhyD4_11660	PWY-5022	4-aminobutanoate degradation V
AhyD4_11660	PWY-6728	methylaspartate cycle
AhyD4_11660	PWY-7126	ethylene biosynthesis IV
AhyD4_11695	PWY-3781	aerobic respiration I (cytochrome c)
AhyD4_11695	PWY-4521	arsenite oxidation I (respiratory)
AhyD4_11695	PWY-6692	Fe(II) oxidation
AhyD4_11695	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AhyD4_11875	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AhyD4_11875	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AhyD4_11875	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AhyD4_11875	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AhyD4_11875	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AhyD4_11875	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AhyD4_11875	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AhyD4_11875	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AhyD4_11875	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AhyD4_11875	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AhyD4_11885	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AhyD4_11885	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AhyD4_11885	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AhyD4_11885	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AhyD4_11885	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AhyD4_11885	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AhyD4_11885	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AhyD4_11885	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AhyD4_11890	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AhyD4_11890	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AhyD4_11890	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AhyD4_11890	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AhyD4_11890	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AhyD4_11890	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AhyD4_11890	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AhyD4_11890	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AhyD4_11945	PWY-3801	sucrose degradation II (sucrose synthase)
AhyD4_11945	PWY-5054	sorbitol biosynthesis I
AhyD4_11945	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AhyD4_11945	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AhyD4_11945	PWY-5659	GDP-mannose biosynthesis
AhyD4_11945	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AhyD4_11945	PWY-621	sucrose degradation III (sucrose invertase)
AhyD4_11945	PWY-622	starch biosynthesis
AhyD4_11945	PWY-6981	chitin biosynthesis
AhyD4_11945	PWY-6992	1,5-anhydrofructose degradation
AhyD4_11945	PWY-7238	sucrose biosynthesis II
AhyD4_11945	PWY-7347	sucrose biosynthesis III
AhyD4_11945	PWY-7385	1,3-propanediol biosynthesis (engineered)
AhyD4_12000	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AhyD4_12030	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AhyD4_12125	PWY-1042	glycolysis IV (plant cytosol)
AhyD4_12125	PWY-5484	glycolysis II (from fructose 6-phosphate)
AhyD4_12125	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AhyD4_12125	PWY-7003	glycerol degradation to butanol
AhyD4_12130	PWY-1042	glycolysis IV (plant cytosol)
AhyD4_12130	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AhyD4_12130	PWY-5484	glycolysis II (from fructose 6-phosphate)
AhyD4_12130	PWY-7385	1,3-propanediol biosynthesis (engineered)
AhyD4_12230	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AhyD4_12230	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AhyD4_12230	PWY-7953	AhyD4_12230
AhyD4_12285	PWY-6349	CDP-archaeol biosynthesis
AhyD4_12295	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AhyD4_12295	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AhyD4_12360	PWY-5941	glycogen degradation II (eukaryotic)
AhyD4_12360	PWY-6731	starch degradation III
AhyD4_12360	PWY-6737	starch degradation V
AhyD4_12360	PWY-7238	sucrose biosynthesis II
AhyD4_12375	PWY-5392	reductive TCA cycle II
AhyD4_12375	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AhyD4_12375	PWY-5690	TCA cycle II (plants and fungi)
AhyD4_12375	PWY-5913	TCA cycle VI (obligate autotrophs)
AhyD4_12375	PWY-6728	methylaspartate cycle
AhyD4_12375	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AhyD4_12375	PWY-7254	TCA cycle VII (acetate-producers)
AhyD4_12375	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AhyD4_12380	PWY-5958	acridone alkaloid biosynthesis
AhyD4_12380	PWY-6543	4-aminobenzoate biosynthesis
AhyD4_12380	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AhyD4_12380	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AhyD4_12440	PWY-7511	protein ubiquitylation
AhyD4_12505	PWY-4261	glycerol degradation I
AhyD4_12505	PWY-6118	glycerol-3-phosphate shuttle
AhyD4_12505	PWY-6952	glycerophosphodiester degradation
AhyD4_12510	PWY-4261	glycerol degradation I
AhyD4_12510	PWY-6118	glycerol-3-phosphate shuttle
AhyD4_12510	PWY-6952	glycerophosphodiester degradation
AhyD4_12530	PWY-5674	nitrate reduction IV (dissimilatory)
AhyD4_12610	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AhyD4_12610	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AhyD4_12610	PWY-6936	seleno-amino acid biosynthesis
AhyD4_12610	PWY-702	L-methionine biosynthesis II
AhyD4_12635	PWY-5676	acetyl-CoA fermentation to butanoate II
AhyD4_12635	PWY-5741	ethylmalonyl-CoA pathway
AhyD4_12635	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AhyD4_12635	PWY-7948	AhyD4_12635
AhyD4_12665	PWY-2941	L-lysine biosynthesis II
AhyD4_12665	PWY-2942	L-lysine biosynthesis III
AhyD4_12665	PWY-5097	L-lysine biosynthesis VI
AhyD4_12665	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AhyD4_12665	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AhyD4_12665	PWY-6559	spermidine biosynthesis II
AhyD4_12665	PWY-6562	norspermidine biosynthesis
AhyD4_12665	PWY-7153	grixazone biosynthesis
AhyD4_12665	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AhyD4_12665	PWY-7977	AhyD4_12665
AhyD4_12685	PWY-5480	pyruvate fermentation to ethanol I
AhyD4_12685	PWY-5485	pyruvate fermentation to acetate IV
AhyD4_12685	PWY-5493	reductive monocarboxylic acid cycle
AhyD4_12700	PWY-6832	2-aminoethylphosphonate degradation II
AhyD4_12740	PWY-5392	reductive TCA cycle II
AhyD4_12740	PWY-5537	pyruvate fermentation to acetate V
AhyD4_12740	PWY-5538	pyruvate fermentation to acetate VI
AhyD4_12740	PWY-5690	TCA cycle II (plants and fungi)
AhyD4_12740	PWY-5913	TCA cycle VI (obligate autotrophs)
AhyD4_12740	PWY-6728	methylaspartate cycle
AhyD4_12740	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AhyD4_12740	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AhyD4_12745	PWY-5392	reductive TCA cycle II
AhyD4_12745	PWY-5537	pyruvate fermentation to acetate V
AhyD4_12745	PWY-5538	pyruvate fermentation to acetate VI
AhyD4_12745	PWY-5690	TCA cycle II (plants and fungi)
AhyD4_12745	PWY-5913	TCA cycle VI (obligate autotrophs)
AhyD4_12745	PWY-6728	methylaspartate cycle
AhyD4_12745	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AhyD4_12745	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AhyD4_12750	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AhyD4_12755	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AhyD4_12760	PWY-3781	aerobic respiration I (cytochrome c)
AhyD4_12760	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AhyD4_12760	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AhyD4_12760	PWY-5690	TCA cycle II (plants and fungi)
AhyD4_12760	PWY-6728	methylaspartate cycle
AhyD4_12760	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AhyD4_12760	PWY-7254	TCA cycle VII (acetate-producers)
AhyD4_12760	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AhyD4_12765	PWY-3781	aerobic respiration I (cytochrome c)
AhyD4_12765	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AhyD4_12765	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AhyD4_12765	PWY-5690	TCA cycle II (plants and fungi)
AhyD4_12765	PWY-6728	methylaspartate cycle
AhyD4_12765	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AhyD4_12765	PWY-7254	TCA cycle VII (acetate-producers)
AhyD4_12765	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AhyD4_12800	PWY-7892	AhyD4_12800
AhyD4_12880	PWY-4261	glycerol degradation I
AhyD4_12905	PWY-6527	stachyose degradation
AhyD4_12920	PWY-6556	pyrimidine ribonucleosides salvage II
AhyD4_12920	PWY-7181	pyrimidine deoxyribonucleosides degradation
AhyD4_12920	PWY-7193	pyrimidine ribonucleosides salvage I
AhyD4_12920	PWY-7199	pyrimidine deoxyribonucleosides salvage
AhyD4_12935	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AhyD4_12935	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AhyD4_12935	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AhyD4_12965	PWY-7158	L-phenylalanine degradation V
AhyD4_12970	PWY-7158	L-phenylalanine degradation V
AhyD4_12975	PWY-6134	L-tyrosine biosynthesis IV
AhyD4_12975	PWY-7158	L-phenylalanine degradation V
AhyD4_13040	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AhyD4_13040	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AhyD4_13040	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AhyD4_13040	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AhyD4_13050	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AhyD4_13095	PWY-7801	AhyD4_13095
AhyD4_13100	PWY-7802	AhyD4_13100
AhyD4_13125	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AhyD4_13125	PWY-2201	folate transformations I
AhyD4_13125	PWY-3841	folate transformations II
AhyD4_13125	PWY-5030	L-histidine degradation III
AhyD4_13125	PWY-5497	purine nucleobases degradation II (anaerobic)
AhyD4_13125	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AhyD4_13125	PWY-7909	AhyD4_13125
AhyD4_13300	PWY-7199	pyrimidine deoxyribonucleosides salvage
AhyD4_13325	PWY-6703	preQ<sub>0</sub> biosynthesis
AhyD4_13330	PWY-6703	preQ<sub>0</sub> biosynthesis
AhyD4_13345	PWY-5686	UMP biosynthesis
AhyD4_13345	PWY-7790	AhyD4_13345
AhyD4_13345	PWY-7791	AhyD4_13345
AhyD4_13370	PWY-7205	CMP phosphorylation
AhyD4_13375	PWY-6168	flavin biosynthesis III (fungi)
AhyD4_13375	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AhyD4_13375	PWY-7991	AhyD4_13375
AhyD4_13570	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AhyD4_13570	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AhyD4_13570	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AhyD4_13625	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AhyD4_13625	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AhyD4_13625	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AhyD4_13625	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AhyD4_13625	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AhyD4_13625	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AhyD4_13625	PWY-7205	CMP phosphorylation
AhyD4_13625	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AhyD4_13625	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AhyD4_13625	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AhyD4_13625	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AhyD4_13625	PWY-7224	purine deoxyribonucleosides salvage
AhyD4_13625	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AhyD4_13625	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AhyD4_13665	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AhyD4_13725	PWY-6700	queuosine biosynthesis
AhyD4_13730	PWY-6700	queuosine biosynthesis
AhyD4_13765	PWY-4202	arsenate detoxification I (glutaredoxin)
AhyD4_13765	PWY-4621	arsenate detoxification II (glutaredoxin)
AhyD4_13835	PWY-2301	<i>myo</i>-inositol biosynthesis
AhyD4_13835	PWY-4702	phytate degradation I
AhyD4_13835	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AhyD4_13855	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AhyD4_13855	PWY-6153	autoinducer AI-2 biosynthesis I
AhyD4_13855	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AhyD4_13870	PWY-6143	CMP-pseudaminate biosynthesis
AhyD4_13870	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
AhyD4_13870	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
AhyD4_13870	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
AhyD4_13870	PWY-7719	AhyD4_13870
AhyD4_13885	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AhyD4_13900	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AhyD4_13900	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AhyD4_13900	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AhyD4_13900	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AhyD4_13905	PWY-6143	CMP-pseudaminate biosynthesis
AhyD4_13985	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AhyD4_13985	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AhyD4_13985	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AhyD4_13985	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AhyD4_14075	PWY-6012	acyl carrier protein metabolism I
AhyD4_14090	PWY-4202	arsenate detoxification I (glutaredoxin)
AhyD4_14090	PWY-4621	arsenate detoxification II (glutaredoxin)
AhyD4_14205	PWY-3461	L-tyrosine biosynthesis II
AhyD4_14205	PWY-3462	L-phenylalanine biosynthesis II
AhyD4_14205	PWY-6120	L-tyrosine biosynthesis III
AhyD4_14205	PWY-6627	salinosporamide A biosynthesis
AhyD4_14205	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AhyD4_14205	PWY-7626	bacilysin biosynthesis
AhyD4_14210	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AhyD4_14210	PWY-6164	3-dehydroquinate biosynthesis I
AhyD4_14210	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AhyD4_14220	PWY-4261	glycerol degradation I
AhyD4_14220	PWY-6118	glycerol-3-phosphate shuttle
AhyD4_14220	PWY-6952	glycerophosphodiester degradation
AhyD4_14240	PWY-4261	glycerol degradation I
AhyD4_14275	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
AhyD4_14410	PWY-40	putrescine biosynthesis I
AhyD4_14410	PWY-43	putrescine biosynthesis II
AhyD4_14410	PWY-6305	putrescine biosynthesis IV
AhyD4_14410	PWY-6834	spermidine biosynthesis III
AhyD4_14430	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AhyD4_14455	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AhyD4_14455	PWY-2161	folate polyglutamylation
AhyD4_14455	PWY-2201	folate transformations I
AhyD4_14455	PWY-3841	folate transformations II
AhyD4_14465	PWY-5663	tetrahydrobiopterin biosynthesis I
AhyD4_14465	PWY-5664	tetrahydrobiopterin biosynthesis II
AhyD4_14465	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AhyD4_14465	PWY-6703	preQ<sub>0</sub> biosynthesis
AhyD4_14465	PWY-6983	tetrahydrobiopterin biosynthesis III
AhyD4_14465	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AhyD4_14465	PWY-7852	AhyD4_14465
AhyD4_14470	PWY-6823	molybdenum cofactor biosynthesis
AhyD4_14475	PWY-6823	molybdenum cofactor biosynthesis
AhyD4_14500	PWY-6823	molybdenum cofactor biosynthesis
AhyD4_14500	PWY-7887	AhyD4_14500
AhyD4_14510	PWY-6823	molybdenum cofactor biosynthesis
AhyD4_14540	PWY-5674	nitrate reduction IV (dissimilatory)
AhyD4_14555	PWY-6823	molybdenum cofactor biosynthesis
AhyD4_14600	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
AhyD4_14605	PWY-7094	fatty acid salvage
AhyD4_14605	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AhyD4_14635	PWY-5386	methylglyoxal degradation I
AhyD4_14775	PWY-2723	trehalose degradation V
AhyD4_14775	PWY-3801	sucrose degradation II (sucrose synthase)
AhyD4_14775	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AhyD4_14775	PWY-5661	GDP-glucose biosynthesis
AhyD4_14775	PWY-5940	streptomycin biosynthesis
AhyD4_14775	PWY-5941	glycogen degradation II (eukaryotic)
AhyD4_14775	PWY-622	starch biosynthesis
AhyD4_14775	PWY-6317	galactose degradation I (Leloir pathway)
AhyD4_14775	PWY-6731	starch degradation III
AhyD4_14775	PWY-6737	starch degradation V
AhyD4_14775	PWY-6749	CMP-legionaminate biosynthesis I
AhyD4_14775	PWY-6981	chitin biosynthesis
AhyD4_14775	PWY-7238	sucrose biosynthesis II
AhyD4_14775	PWY-7343	UDP-glucose biosynthesis
AhyD4_14775	PWY-7900	AhyD4_14775
AhyD4_14775	PWY-7902	AhyD4_14775
AhyD4_14820	PWY-6902	chitin degradation II
AhyD4_14820	PWY-7822	AhyD4_14820
AhyD4_14820	PWY-7883	AhyD4_14820
AhyD4_14830	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AhyD4_14830	PWY-6855	chitin degradation I (archaea)
AhyD4_14830	PWY-6906	chitin derivatives degradation
AhyD4_14835	PWY-6906	chitin derivatives degradation
AhyD4_14835	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AhyD4_14835	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AhyD4_14885	PWY-6840	homoglutathione biosynthesis
AhyD4_14885	PWY-7255	ergothioneine biosynthesis I (bacteria)
AhyD4_14940	PWY-6936	seleno-amino acid biosynthesis
AhyD4_14995	PWY-5963	thio-molybdenum cofactor biosynthesis
AhyD4_15010	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AhyD4_15015	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AhyD4_15020	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AhyD4_15020	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AhyD4_15020	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AhyD4_15025	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AhyD4_15055	PWY-6482	diphthamide biosynthesis (archaea)
AhyD4_15055	PWY-7546	diphthamide biosynthesis (eukaryotes)
AhyD4_15100	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
AhyD4_15150	PWY-4202	arsenate detoxification I (glutaredoxin)
AhyD4_15150	PWY-5532	adenosine nucleotides degradation IV
AhyD4_15150	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AhyD4_15150	PWY-6608	guanosine nucleotides degradation III
AhyD4_15150	PWY-6609	adenine and adenosine salvage III
AhyD4_15150	PWY-6611	adenine and adenosine salvage V
AhyD4_15150	PWY-6620	guanine and guanosine salvage
AhyD4_15150	PWY-6627	salinosporamide A biosynthesis
AhyD4_15150	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AhyD4_15150	PWY-7179	purine deoxyribonucleosides degradation I
AhyD4_15150	PWY-7179-1	purine deoxyribonucleosides degradation
AhyD4_15545	PWY-5913	TCA cycle VI (obligate autotrophs)
AhyD4_15545	PWY-6549	L-glutamine biosynthesis III
AhyD4_15545	PWY-6728	methylaspartate cycle
AhyD4_15545	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AhyD4_15545	PWY-7124	ethylene biosynthesis V (engineered)
AhyD4_15545	PWY-7254	TCA cycle VII (acetate-producers)
AhyD4_15545	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AhyD4_15555	PWY-3861	mannitol degradation II
AhyD4_15555	PWY-3881	mannitol biosynthesis
AhyD4_15555	PWY-5659	GDP-mannose biosynthesis
AhyD4_15555	PWY-6992	1,5-anhydrofructose degradation
AhyD4_15555	PWY-7456	mannan degradation
AhyD4_15555	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
AhyD4_15555	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AhyD4_15650	PWY-7887	AhyD4_15650
AhyD4_15650	PWY-7892	AhyD4_15650
AhyD4_15660	PWY-6123	inosine-5'-phosphate biosynthesis I
AhyD4_15660	PWY-6124	inosine-5'-phosphate biosynthesis II
AhyD4_15660	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AhyD4_15660	PWY-7234	inosine-5'-phosphate biosynthesis III
AhyD4_15690	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AhyD4_15690	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AhyD4_15715	PWY-6854	ethylene biosynthesis III (microbes)
AhyD4_15890	PWY-7980	AhyD4_15890
AhyD4_15975	PWY-2722	trehalose degradation IV
AhyD4_15975	PWY-2723	trehalose degradation V
AhyD4_15975	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AhyD4_15975	PWY-5661	GDP-glucose biosynthesis
AhyD4_15975	PWY-621	sucrose degradation III (sucrose invertase)
AhyD4_15975	PWY-7238	sucrose biosynthesis II
AhyD4_15975	PWY-7385	1,3-propanediol biosynthesis (engineered)
AhyD4_15985	PWY-1042	glycolysis IV (plant cytosol)
AhyD4_15985	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AhyD4_15985	PWY-5484	glycolysis II (from fructose 6-phosphate)
AhyD4_15985	PWY-5723	Rubisco shunt
AhyD4_15985	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AhyD4_15985	PWY-6886	1-butanol autotrophic biosynthesis
AhyD4_15985	PWY-6901	superpathway of glucose and xylose degradation
AhyD4_15985	PWY-7003	glycerol degradation to butanol
AhyD4_15985	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AhyD4_15985	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AhyD4_16000	PWY-7094	fatty acid salvage
AhyD4_16000	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AhyD4_16080	PWY-7167	choline degradation III
AhyD4_16095	PWY-5437	L-threonine degradation I
AhyD4_16095	PWY-7013	L-1,2-propanediol degradation
AhyD4_16170	PWY-5506	methanol oxidation to formaldehyde IV
AhyD4_16190	PWY-4261	glycerol degradation I
AhyD4_16260	PWY-6012	acyl carrier protein metabolism I
AhyD4_16260	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AhyD4_16260	PWY-6289	petrobactin biosynthesis
AhyD4_16275	PWY-6167	flavin biosynthesis II (archaea)
AhyD4_16275	PWY-6168	flavin biosynthesis III (fungi)
AhyD4_16280	PWY-2201	folate transformations I
AhyD4_16280	PWY-5497	purine nucleobases degradation II (anaerobic)
AhyD4_16280	PWY-7909	AhyD4_16280
AhyD4_16415	PWY-6339	syringate degradation
AhyD4_16445	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AhyD4_16445	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AhyD4_16630	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AhyD4_16630	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AhyD4_16630	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AhyD4_16800	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AhyD4_16800	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AhyD4_16820	PWY-4381	fatty acid biosynthesis initiation I
AhyD4_16820	PWY-5743	3-hydroxypropanoate cycle
AhyD4_16820	PWY-5744	glyoxylate assimilation
AhyD4_16820	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AhyD4_16820	PWY-6722	candicidin biosynthesis
AhyD4_16845	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AhyD4_16845	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AhyD4_16845	PWY-5989	stearate biosynthesis II (bacteria and plants)
AhyD4_16845	PWY-5994	palmitate biosynthesis I (animals and fungi)
AhyD4_16845	PWY-6113	superpathway of mycolate biosynthesis
AhyD4_16845	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AhyD4_16845	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AhyD4_16845	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AhyD4_16845	PWY-7663	gondoate biosynthesis (anaerobic)
AhyD4_16845	PWY-7664	oleate biosynthesis IV (anaerobic)
AhyD4_16845	PWY-7858	AhyD4_16845
AhyD4_16845	PWYG-321	mycolate biosynthesis
AhyD4_16870	PWY-7560	methylerythritol phosphate pathway II
AhyD4_16875	PWY-5667	CDP-diacylglycerol biosynthesis I
AhyD4_16875	PWY-5981	CDP-diacylglycerol biosynthesis III
AhyD4_16875	PWY-7817	AhyD4_16875
AhyD4_16905	PWY-7799	AhyD4_16905
AhyD4_16905	PWY-7800	AhyD4_16905
AhyD4_16985	PWY-6700	queuosine biosynthesis
AhyD4_17000	PWY-6617	adenosine nucleotides degradation III
AhyD4_17000	PWY-7569	arginomycin biosynthesis
AhyD4_17000	PWY-7570	blasticidin S biosynthesis
AhyD4_17135	PWY-6654	phosphopantothenate biosynthesis III
AhyD4_17145	PWY-5101	L-isoleucine biosynthesis II
AhyD4_17145	PWY-5103	L-isoleucine biosynthesis III
AhyD4_17145	PWY-5104	L-isoleucine biosynthesis IV
AhyD4_17145	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AhyD4_17145	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AhyD4_17145	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AhyD4_17145	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AhyD4_17150	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AhyD4_17200	PWY-3821	galactose degradation III
AhyD4_17200	PWY-6317	galactose degradation I (Leloir pathway)
AhyD4_17200	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AhyD4_17200	PWY-6527	stachyose degradation
AhyD4_17200	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AhyD4_17200	PWY-7344	UDP-D-galactose biosynthesis
AhyD4_17305	PWY-3461	L-tyrosine biosynthesis II
AhyD4_17305	PWY-3462	L-phenylalanine biosynthesis II
AhyD4_17305	PWY-6120	L-tyrosine biosynthesis III
AhyD4_17305	PWY-6627	salinosporamide A biosynthesis
AhyD4_17305	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AhyD4_17305	PWY-7626	bacilysin biosynthesis
AhyD4_17390	PWY-6703	preQ<sub>0</sub> biosynthesis
AhyD4_17395	PWY-6703	preQ<sub>0</sub> biosynthesis
AhyD4_17625	PWY-4381	fatty acid biosynthesis initiation I
AhyD4_17725	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AhyD4_17820	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AhyD4_17820	PWY-7820	AhyD4_17820
AhyD4_17860	PWY-5723	Rubisco shunt
AhyD4_17890	PWY-6855	chitin degradation I (archaea)
AhyD4_17890	PWY-6902	chitin degradation II
AhyD4_17890	PWY-7822	AhyD4_17890
AhyD4_17900	PWY-6855	chitin degradation I (archaea)
AhyD4_17900	PWY-6902	chitin degradation II
AhyD4_17900	PWY-7822	AhyD4_17900
AhyD4_17945	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AhyD4_17945	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AhyD4_17985	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AhyD4_17995	PWY-4202	arsenate detoxification I (glutaredoxin)
AhyD4_17995	PWY-5532	adenosine nucleotides degradation IV
AhyD4_17995	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AhyD4_17995	PWY-6608	guanosine nucleotides degradation III
AhyD4_17995	PWY-6609	adenine and adenosine salvage III
AhyD4_17995	PWY-6611	adenine and adenosine salvage V
AhyD4_17995	PWY-6620	guanine and guanosine salvage
AhyD4_17995	PWY-6627	salinosporamide A biosynthesis
AhyD4_17995	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AhyD4_17995	PWY-7179	purine deoxyribonucleosides degradation I
AhyD4_17995	PWY-7179-1	purine deoxyribonucleosides degradation
AhyD4_18450	PWY-2781	<i>cis</i>-zeatin biosynthesis
AhyD4_18470	PWY-6938	NADH repair
AhyD4_18475	PWY-6700	queuosine biosynthesis
AhyD4_18575	PWY-6123	inosine-5'-phosphate biosynthesis I
AhyD4_18575	PWY-6124	inosine-5'-phosphate biosynthesis II
AhyD4_18575	PWY-7234	inosine-5'-phosphate biosynthesis III
AhyD4_18585	PWY-2941	L-lysine biosynthesis II
AhyD4_18585	PWY-2942	L-lysine biosynthesis III
AhyD4_18585	PWY-5097	L-lysine biosynthesis VI
AhyD4_18610	PWY-5482	pyruvate fermentation to acetate II
AhyD4_18610	PWY-5485	pyruvate fermentation to acetate IV
AhyD4_18610	PWY-5497	purine nucleobases degradation II (anaerobic)
AhyD4_18615	PWY-1281	sulfoacetaldehyde degradation I
AhyD4_18615	PWY-5482	pyruvate fermentation to acetate II
AhyD4_18615	PWY-5485	pyruvate fermentation to acetate IV
AhyD4_18615	PWY-5497	purine nucleobases degradation II (anaerobic)
AhyD4_18615	PWY-6637	sulfolactate degradation II
AhyD4_18620	PWY-5101	L-isoleucine biosynthesis II
AhyD4_18620	PWY-5103	L-isoleucine biosynthesis III
AhyD4_18620	PWY-5104	L-isoleucine biosynthesis IV
AhyD4_18620	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AhyD4_18620	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AhyD4_18620	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AhyD4_18620	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AhyD4_18625	PWY-5101	L-isoleucine biosynthesis II
AhyD4_18625	PWY-5103	L-isoleucine biosynthesis III
AhyD4_18625	PWY-5104	L-isoleucine biosynthesis IV
AhyD4_18625	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AhyD4_18625	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AhyD4_18625	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AhyD4_18625	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AhyD4_18645	PWY-6871	3-methylbutanol biosynthesis
AhyD4_18650	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AhyD4_18700	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AhyD4_18700	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AhyD4_18700	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AhyD4_18700	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AhyD4_18700	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AhyD4_18700	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AhyD4_18700	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AhyD4_18700	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AhyD4_18775	PWY-5392	reductive TCA cycle II
AhyD4_18775	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AhyD4_18775	PWY-5690	TCA cycle II (plants and fungi)
AhyD4_18775	PWY-5913	TCA cycle VI (obligate autotrophs)
AhyD4_18775	PWY-6728	methylaspartate cycle
AhyD4_18775	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AhyD4_18775	PWY-7254	TCA cycle VII (acetate-producers)
AhyD4_18775	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AhyD4_18855	PWY-6123	inosine-5'-phosphate biosynthesis I
AhyD4_18855	PWY-6124	inosine-5'-phosphate biosynthesis II
AhyD4_18855	PWY-7234	inosine-5'-phosphate biosynthesis III
AhyD4_18860	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AhyD4_18860	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AhyD4_18860	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AhyD4_18875	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AhyD4_18875	PWY-622	starch biosynthesis
AhyD4_18875	PWY-7900	AhyD4_18875
AhyD4_18930	PWY-5381	pyridine nucleotide cycling (plants)
AhyD4_18930	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AhyD4_18930	PWY-6596	adenosine nucleotides degradation I
AhyD4_18930	PWY-6606	guanosine nucleotides degradation II
AhyD4_18930	PWY-6607	guanosine nucleotides degradation I
AhyD4_18930	PWY-6608	guanosine nucleotides degradation III
AhyD4_18930	PWY-7185	UTP and CTP dephosphorylation I
AhyD4_18930	PWY-7821	AhyD4_18930
AhyD4_18940	PWY-7560	methylerythritol phosphate pathway II
AhyD4_18945	PWY-7560	methylerythritol phosphate pathway II
AhyD4_18955	PWY-1042	glycolysis IV (plant cytosol)
AhyD4_18955	PWY-1622	formaldehyde assimilation I (serine pathway)
AhyD4_18955	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AhyD4_18955	PWY-5484	glycolysis II (from fructose 6-phosphate)
AhyD4_18955	PWY-5723	Rubisco shunt
AhyD4_18955	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AhyD4_18955	PWY-6886	1-butanol autotrophic biosynthesis
AhyD4_18955	PWY-6901	superpathway of glucose and xylose degradation
AhyD4_18955	PWY-7003	glycerol degradation to butanol
AhyD4_18955	PWY-7124	ethylene biosynthesis V (engineered)
AhyD4_18955	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AhyD4_18960	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AhyD4_18960	PWY-7177	UTP and CTP dephosphorylation II
AhyD4_18960	PWY-7185	UTP and CTP dephosphorylation I
AhyD4_19030	PWY-6906	chitin derivatives degradation
AhyD4_19030	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AhyD4_19030	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AhyD4_19035	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AhyD4_19035	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AhyD4_19095	PWY-5316	nicotine biosynthesis
AhyD4_19095	PWY-7342	superpathway of nicotine biosynthesis
AhyD4_19150	PWY-1042	glycolysis IV (plant cytosol)
AhyD4_19150	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AhyD4_19150	PWY-5484	glycolysis II (from fructose 6-phosphate)
AhyD4_19150	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AhyD4_19150	PWY-7385	1,3-propanediol biosynthesis (engineered)
AhyD4_19155	PWY-1042	glycolysis IV (plant cytosol)
AhyD4_19155	PWY-5484	glycolysis II (from fructose 6-phosphate)
AhyD4_19155	PWY-6886	1-butanol autotrophic biosynthesis
AhyD4_19155	PWY-6901	superpathway of glucose and xylose degradation
AhyD4_19155	PWY-7003	glycerol degradation to butanol
AhyD4_19170	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AhyD4_19170	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AhyD4_19170	PWY-7766	AhyD4_19170
AhyD4_19175	PWY-5381	pyridine nucleotide cycling (plants)
AhyD4_19175	PWY-7761	AhyD4_19175
AhyD4_19180	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AhyD4_19180	PWY-6853	ethylene biosynthesis II (microbes)
AhyD4_19180	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AhyD4_19310	PWY-723	alkylnitronates degradation
AhyD4_19375	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AhyD4_19380	PWY-43	putrescine biosynthesis II
AhyD4_19470	PWY-6840	homoglutathione biosynthesis
AhyD4_19470	PWY-7255	ergothioneine biosynthesis I (bacteria)
AhyD4_19565	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AhyD4_19565	PWY-6153	autoinducer AI-2 biosynthesis I
AhyD4_19565	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AhyD4_19580	PWY-5381	pyridine nucleotide cycling (plants)
AhyD4_19580	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AhyD4_19580	PWY-7761	AhyD4_19580
AhyD4_19640	PWY-7560	methylerythritol phosphate pathway II
AhyD4_19650	PWY-7884	AhyD4_19650
AhyD4_19660	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AhyD4_19660	PWY-6167	flavin biosynthesis II (archaea)
AhyD4_19660	PWY-6168	flavin biosynthesis III (fungi)
AhyD4_19660	PWY-7863	AhyD4_19660
AhyD4_19695	PWY-3841	folate transformations II
AhyD4_19695	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AhyD4_19695	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AhyD4_19695	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AhyD4_19695	PWY-7199	pyrimidine deoxyribonucleosides salvage
AhyD4_19695	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AhyD4_19730	PWY-6829	tRNA methylation (yeast)
AhyD4_19730	PWY-7285	methylwyosine biosynthesis
AhyD4_19730	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AhyD4_19775	PWY-1622	formaldehyde assimilation I (serine pathway)
AhyD4_19775	PWY-5392	reductive TCA cycle II
AhyD4_19775	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AhyD4_19775	PWY-5690	TCA cycle II (plants and fungi)
AhyD4_19775	PWY-5913	TCA cycle VI (obligate autotrophs)
AhyD4_19775	PWY-6728	methylaspartate cycle
AhyD4_19775	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AhyD4_19775	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AhyD4_19775	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AhyD4_19950	PWY-5913	TCA cycle VI (obligate autotrophs)
AhyD4_19950	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AhyD4_19950	PWY-6638	sulfolactate degradation III
AhyD4_19950	PWY-6642	(<i>R</i>)-cysteate degradation
AhyD4_19950	PWY-6643	coenzyme M biosynthesis II
AhyD4_19950	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AhyD4_19950	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AhyD4_19950	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AhyD4_20090	PWY-4983	L-citrulline-nitric oxide cycle
AhyD4_20090	PWY-4984	urea cycle
AhyD4_20090	PWY-5	canavanine biosynthesis
AhyD4_20090	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AhyD4_20090	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AhyD4_20095	PWY-4983	L-citrulline-nitric oxide cycle
AhyD4_20095	PWY-4984	urea cycle
AhyD4_20095	PWY-5	canavanine biosynthesis
AhyD4_20095	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AhyD4_20095	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AhyD4_20100	PWY-4981	L-proline biosynthesis II (from arginine)
AhyD4_20100	PWY-4984	urea cycle
AhyD4_20100	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AhyD4_20105	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AhyD4_20105	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AhyD4_20110	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AhyD4_20110	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AhyD4_20115	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AhyD4_20120	PWY-1622	formaldehyde assimilation I (serine pathway)
AhyD4_20120	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AhyD4_20120	PWY-5913	TCA cycle VI (obligate autotrophs)
AhyD4_20120	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AhyD4_20120	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AhyD4_20120	PWY-6549	L-glutamine biosynthesis III
AhyD4_20120	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AhyD4_20120	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AhyD4_20120	PWY-7124	ethylene biosynthesis V (engineered)
AhyD4_20130	PWY-2941	L-lysine biosynthesis II
AhyD4_20130	PWY-2942	L-lysine biosynthesis III
AhyD4_20130	PWY-5097	L-lysine biosynthesis VI
AhyD4_20130	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AhyD4_20130	PWY-6559	spermidine biosynthesis II
AhyD4_20130	PWY-6562	norspermidine biosynthesis
AhyD4_20130	PWY-7153	grixazone biosynthesis
AhyD4_20130	PWY-7977	AhyD4_20130
AhyD4_20135	PWY-801	L-homocysteine and L-cysteine interconversion
AhyD4_20255	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AhyD4_20255	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AhyD4_20300	PWY-6157	autoinducer AI-1 biosynthesis
AhyD4_20330	PWY-6531	mannitol cycle
AhyD4_20415	PWY-5839	menaquinol-7 biosynthesis
AhyD4_20415	PWY-5851	demethylmenaquinol-9 biosynthesis
AhyD4_20415	PWY-5852	demethylmenaquinol-8 biosynthesis I
AhyD4_20415	PWY-5853	demethylmenaquinol-6 biosynthesis I
AhyD4_20415	PWY-5890	menaquinol-10 biosynthesis
AhyD4_20415	PWY-5891	menaquinol-11 biosynthesis
AhyD4_20415	PWY-5892	menaquinol-12 biosynthesis
AhyD4_20415	PWY-5895	menaquinol-13 biosynthesis
AhyD4_20420	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AhyD4_20420	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AhyD4_20420	PWY-6406	salicylate biosynthesis I
AhyD4_20425	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AhyD4_20430	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AhyD4_20435	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AhyD4_20440	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AhyD4_20500	PWY-6854	ethylene biosynthesis III (microbes)
AhyD4_20700	PWY-2941	L-lysine biosynthesis II
AhyD4_20700	PWY-5097	L-lysine biosynthesis VI
AhyD4_20705	PWY-2941	L-lysine biosynthesis II
AhyD4_20705	PWY-2942	L-lysine biosynthesis III
AhyD4_20705	PWY-5097	L-lysine biosynthesis VI
AhyD4_20725	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AhyD4_20725	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AhyD4_20730	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AhyD4_20730	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AhyD4_20750	PWY-5484	glycolysis II (from fructose 6-phosphate)
AhyD4_20845	PWY-6892	thiazole biosynthesis I (E. coli)
AhyD4_20845	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AhyD4_20850	PWY-6891	thiazole biosynthesis II (Bacillus)
AhyD4_20850	PWY-6892	thiazole biosynthesis I (E. coli)
AhyD4_20865	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AhyD4_20865	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AhyD4_20865	PWY-6897	thiamin salvage II
AhyD4_20865	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AhyD4_20865	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AhyD4_20865	PWY-6910	hydroxymethylpyrimidine salvage
AhyD4_20865	PWY-7356	thiamin salvage IV (yeast)
AhyD4_20865	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AhyD4_20870	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AhyD4_20910	PWY-2201	folate transformations I
AhyD4_20910	PWY-3841	folate transformations II
AhyD4_20910	PWY-7977	AhyD4_20910
AhyD4_21025	PWY-6348	phosphate acquisition
AhyD4_21065	PWY-6482	diphthamide biosynthesis (archaea)
AhyD4_21065	PWY-7546	diphthamide biosynthesis (eukaryotes)
AhyD4_21260	PWY-5028	L-histidine degradation II
AhyD4_21260	PWY-5030	L-histidine degradation III
AhyD4_21265	PWY-5028	L-histidine degradation II
AhyD4_21265	PWY-5030	L-histidine degradation III
AhyD4_21275	PWY-5028	L-histidine degradation II
AhyD4_21275	PWY-5030	L-histidine degradation III
AhyD4_21285	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AhyD4_21285	PWY-5743	3-hydroxypropanoate cycle
AhyD4_21285	PWY-5744	glyoxylate assimilation
AhyD4_21285	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AhyD4_21285	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AhyD4_21285	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AhyD4_21285	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AhyD4_21330	PWY-5987	sorgoleone biosynthesis
AhyD4_21330	PWY-5996	oleate biosynthesis II (animals and fungi)
AhyD4_21650	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AhyD4_21665	PWY-5667	CDP-diacylglycerol biosynthesis I
AhyD4_21665	PWY-5981	CDP-diacylglycerol biosynthesis III
AhyD4_21665	PWY-7902	AhyD4_21665
AhyD4_21680	PWY-1042	glycolysis IV (plant cytosol)
AhyD4_21680	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AhyD4_21680	PWY-5484	glycolysis II (from fructose 6-phosphate)
AhyD4_21680	PWY-5723	Rubisco shunt
AhyD4_21680	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AhyD4_21680	PWY-6886	1-butanol autotrophic biosynthesis
AhyD4_21680	PWY-6901	superpathway of glucose and xylose degradation
AhyD4_21680	PWY-7003	glycerol degradation to butanol
AhyD4_21680	PWY-7124	ethylene biosynthesis V (engineered)
AhyD4_21680	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AhyD4_21700	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AhyD4_21700	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AhyD4_21700	PWY-7242	D-fructuronate degradation
AhyD4_21700	PWY-7310	D-glucosaminate degradation
AhyD4_21700	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AhyD4_21705	PWY-5101	L-isoleucine biosynthesis II
AhyD4_21705	PWY-5103	L-isoleucine biosynthesis III
AhyD4_21705	PWY-5104	L-isoleucine biosynthesis IV
AhyD4_21705	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AhyD4_21710	PWY-5530	sorbitol biosynthesis II
AhyD4_21710	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AhyD4_21760	PWY-381	nitrate reduction II (assimilatory)
AhyD4_21760	PWY-5675	nitrate reduction V (assimilatory)
AhyD4_21760	PWY-6549	L-glutamine biosynthesis III
AhyD4_21760	PWY-6963	ammonia assimilation cycle I
AhyD4_21760	PWY-6964	ammonia assimilation cycle II
AhyD4_21780	PWY-6609	adenine and adenosine salvage III
AhyD4_21780	PWY-6611	adenine and adenosine salvage V
AhyD4_21780	PWY-7179	purine deoxyribonucleosides degradation I
AhyD4_21780	PWY-7179-1	purine deoxyribonucleosides degradation
AhyD4_21785	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AhyD4_21820	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AhyD4_21825	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AhyD4_21835	PWY-6123	inosine-5'-phosphate biosynthesis I
AhyD4_21835	PWY-7234	inosine-5'-phosphate biosynthesis III
AhyD4_22055	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AhyD4_22055	PWY-3162	L-tryptophan degradation V (side chain pathway)
AhyD4_22055	PWY-5057	L-valine degradation II
AhyD4_22055	PWY-5076	L-leucine degradation III
AhyD4_22055	PWY-5078	L-isoleucine degradation II
AhyD4_22055	PWY-5079	L-phenylalanine degradation III
AhyD4_22055	PWY-5082	L-methionine degradation III
AhyD4_22055	PWY-5480	pyruvate fermentation to ethanol I
AhyD4_22055	PWY-5486	pyruvate fermentation to ethanol II
AhyD4_22055	PWY-5751	phenylethanol biosynthesis
AhyD4_22055	PWY-6313	serotonin degradation
AhyD4_22055	PWY-6333	acetaldehyde biosynthesis I
AhyD4_22055	PWY-6342	noradrenaline and adrenaline degradation
AhyD4_22055	PWY-6587	pyruvate fermentation to ethanol III
AhyD4_22055	PWY-6802	salidroside biosynthesis
AhyD4_22055	PWY-6871	3-methylbutanol biosynthesis
AhyD4_22055	PWY-7013	L-1,2-propanediol degradation
AhyD4_22055	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AhyD4_22055	PWY-7118	chitin degradation to ethanol
AhyD4_22055	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AhyD4_22055	PWY-7798	AhyD4_22055
AhyD4_22060	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AhyD4_22100	PWY-6807	xyloglucan degradation II (exoglucanase)
AhyD4_22165	PWY-6936	seleno-amino acid biosynthesis
AhyD4_22165	PWY-7274	D-cycloserine biosynthesis
AhyD4_22165	PWY-7870	AhyD4_22165
AhyD4_22210	PWY-5667	CDP-diacylglycerol biosynthesis I
AhyD4_22210	PWY-6453	stigma estolide biosynthesis
AhyD4_22210	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AhyD4_22210	PWY-7587	oleate biosynthesis III (cyanobacteria)
AhyD4_22220	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
AhyD4_22220	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AhyD4_22220	PWY-6148	tetrahydromethanopterin biosynthesis
AhyD4_22220	PWY-7742	AhyD4_22220
AhyD4_22220	PWY-7745	AhyD4_22220
AhyD4_22220	PWY-7929	AhyD4_22220
AhyD4_22220	PWY-7934	AhyD4_22220
AhyD4_22220	PWY-7935	AhyD4_22220
AhyD4_22260	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AhyD4_22280	PWY-7851	AhyD4_22280
AhyD4_22310	PWY-7851	AhyD4_22310
AhyD4_22335	PWY-3801	sucrose degradation II (sucrose synthase)
AhyD4_22335	PWY-5054	sorbitol biosynthesis I
AhyD4_22335	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AhyD4_22335	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AhyD4_22335	PWY-5659	GDP-mannose biosynthesis
AhyD4_22335	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AhyD4_22335	PWY-621	sucrose degradation III (sucrose invertase)
AhyD4_22335	PWY-622	starch biosynthesis
AhyD4_22335	PWY-6981	chitin biosynthesis
AhyD4_22335	PWY-6992	1,5-anhydrofructose degradation
AhyD4_22335	PWY-7238	sucrose biosynthesis II
AhyD4_22335	PWY-7347	sucrose biosynthesis III
AhyD4_22335	PWY-7385	1,3-propanediol biosynthesis (engineered)
AhyD4_22340	PWY-5103	L-isoleucine biosynthesis III
AhyD4_22340	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AhyD4_22360	PWY-5392	reductive TCA cycle II
AhyD4_22360	PWY-5537	pyruvate fermentation to acetate V
AhyD4_22360	PWY-5538	pyruvate fermentation to acetate VI
AhyD4_22360	PWY-5690	TCA cycle II (plants and fungi)
AhyD4_22360	PWY-5913	TCA cycle VI (obligate autotrophs)
AhyD4_22360	PWY-6728	methylaspartate cycle
AhyD4_22360	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AhyD4_22360	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AhyD4_22405	PWY-5108	L-isoleucine biosynthesis V
AhyD4_22405	PWY-5132	humulone biosynthesis
AhyD4_22405	PWY-5133	cohumulone biosynthesis
AhyD4_22405	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AhyD4_22405	PWY-7118	chitin degradation to ethanol
AhyD4_22405	PWY-7857	AhyD4_22405
AhyD4_22410	PWY-1361	benzoyl-CoA degradation I (aerobic)
AhyD4_22410	PWY-5109	2-methylbutanoate biosynthesis
AhyD4_22410	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AhyD4_22410	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
AhyD4_22410	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AhyD4_22410	PWY-5177	glutaryl-CoA degradation
AhyD4_22410	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AhyD4_22410	PWY-6435	4-hydroxybenzoate biosynthesis V
AhyD4_22410	PWY-6583	pyruvate fermentation to butanol I
AhyD4_22410	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
AhyD4_22410	PWY-6863	pyruvate fermentation to hexanol
AhyD4_22410	PWY-6883	pyruvate fermentation to butanol II
AhyD4_22410	PWY-6944	androstenedione degradation
AhyD4_22410	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AhyD4_22410	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AhyD4_22410	PWY-7007	methyl ketone biosynthesis
AhyD4_22410	PWY-7046	4-coumarate degradation (anaerobic)
AhyD4_22410	PWY-7094	fatty acid salvage
AhyD4_22410	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AhyD4_22410	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
AhyD4_22410	PWY-7292	oleate &beta;-oxidation (thioesterase-dependent, yeast)
AhyD4_22410	PWY-7307	oleate &beta;-oxidation (reductase-dependent, yeast)
AhyD4_22410	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AhyD4_22410	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AhyD4_22410	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AhyD4_22410	PWY-735	jasmonic acid biosynthesis
AhyD4_22410	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AhyD4_22410	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AhyD4_22410	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AhyD4_22410	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AhyD4_22410	PWY-7726	AhyD4_22410
AhyD4_22410	PWY-7778	AhyD4_22410
AhyD4_22410	PWY-7779	AhyD4_22410
AhyD4_22415	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AhyD4_22415	PWY-6435	4-hydroxybenzoate biosynthesis V
AhyD4_22415	PWY-6863	pyruvate fermentation to hexanol
AhyD4_22415	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AhyD4_22415	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AhyD4_22415	PWY-6948	sitosterol degradation to androstenedione
AhyD4_22415	PWY-7094	fatty acid salvage
AhyD4_22415	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
AhyD4_22415	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AhyD4_22415	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AhyD4_22415	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
AhyD4_22415	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AhyD4_22415	PWY-735	jasmonic acid biosynthesis
AhyD4_22415	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AhyD4_22415	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AhyD4_22415	PWY-7726	AhyD4_22415
AhyD4_22590	PWY-5350	thiosulfate disproportionation III (rhodanese)
AhyD4_22590	PWY-7927	AhyD4_22590
AhyD4_22615	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AhyD4_22615	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AhyD4_22615	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AhyD4_22615	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AhyD4_22615	PWY-6978	plastoquinol-9 biosynthesis II
AhyD4_22625	PWY-7980	AhyD4_22625
AhyD4_22670	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AhyD4_22670	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AhyD4_22705	PWY-5839	menaquinol-7 biosynthesis
AhyD4_22705	PWY-5844	menaquinol-9 biosynthesis
AhyD4_22705	PWY-5849	menaquinol-6 biosynthesis
AhyD4_22705	PWY-5890	menaquinol-10 biosynthesis
AhyD4_22705	PWY-5891	menaquinol-11 biosynthesis
AhyD4_22705	PWY-5892	menaquinol-12 biosynthesis
AhyD4_22705	PWY-5895	menaquinol-13 biosynthesis
AhyD4_22860	PWY-6749	CMP-legionaminate biosynthesis I
AhyD4_22890	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AhyD4_22900	PWY-7980	AhyD4_22900
AhyD4_22910	PWY-7980	AhyD4_22910
AhyD4_23270	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
