locus-tag	class	description
NQU91_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NQU91_00010	COG0592	DNA-directed DNA polymerase activity
NQU91_00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NQU91_00030	COG2378	regulation of single-species biofilm formation
NQU91_00035	COG0071	Belongs to the small heat shock protein (HSP20) family
NQU91_00040	COG0071	Belongs to the small heat shock protein (HSP20) family
NQU91_00045	COG3977	Valine--pyruvate aminotransferase
NQU91_00060	COG2814	Major facilitator Superfamily
NQU91_00065	COG0745	RESPONSE REGULATOR receiver
NQU91_00070	COG2205	protein histidine kinase activity
NQU91_00090	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NQU91_00095	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NQU91_00095	COG4191	Histidine kinase
NQU91_00100	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NQU91_00105	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NQU91_00110	COG1309	transcriptional regulator
NQU91_00140	COG0469	pyruvate kinase activity
NQU91_00145	COG2271	Major facilitator Superfamily
NQU91_00170	COG0561	phosphatase activity
NQU91_00175	COG2267	carboxylic ester hydrolase activity
NQU91_00180	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NQU91_00185	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NQU91_00190	COG1758	RNA polymerase activity
NQU91_00200	COG0859	PFAM glycosyl transferase family 9
NQU91_00205	COG3642	lipopolysaccharide core region biosynthetic process
NQU91_00245	COG0589	response to stress
NQU91_00250	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
NQU91_00260	COG1528	Iron-storage protein
NQU91_00265	COG2081	HI0933 family
NQU91_00270	COG2223	nitrite transmembrane transporter activity
NQU91_00290	COG3188	usher protein
NQU91_00310	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NQU91_00310	COG2205	protein histidine kinase activity
NQU91_00320	COG3275	phosphorelay sensor kinase activity
NQU91_00325	COG3279	Response regulator of the LytR AlgR family
NQU91_00330	COG2223	nitrite transmembrane transporter activity
NQU91_00335	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NQU91_00340	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
NQU91_00355	COG0583	DNA-binding transcription factor activity
NQU91_00360	COG4206	TonB-dependent receptor
NQU91_00365	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
NQU91_00400	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
NQU91_00405	COG2166	iron-sulfur cluster assembly
NQU91_00410	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NQU91_00425	COG3245	cytochrome
NQU91_00430	COG1063	alcohol dehydrogenase
NQU91_00435	COG0156	8-amino-7-oxononanoate synthase activity
NQU91_00445	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NQU91_00460	COG3306	glycosyltransferase involved in LPS biosynthesis
NQU91_00480	COG1561	YicC-like family, N-terminal region
NQU91_00485	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
NQU91_00490	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NQU91_00500	COG0789	Transcriptional regulator
NQU91_00505	COG5001	Diguanylate cyclase
NQU91_00505	COG4251	negative regulation of phosphorylation
NQU91_00505	COG3706	GGDEF domain
NQU91_00505	COG2203	Gaf domain
NQU91_00510	COG3084	Protein conserved in bacteria
NQU91_00520	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
NQU91_00525	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NQU91_00530	COG3639	organic phosphonate transmembrane transporter activity
NQU91_00535	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
NQU91_00540	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
NQU91_00550	COG1335	isochorismatase
NQU91_00560	COG1683	Conserved Protein
NQU91_00565	COG0204	Acyl-transferase
NQU91_00570	COG0204	Acyl-transferase
NQU91_00575	COG0606	chelatase, subunit chli
NQU91_00585	COG3978	acetolactate synthase activity
NQU91_00595	COG0129	dihydroxy-acid dehydratase activity
NQU91_00625	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NQU91_00630	COG0254	rRNA binding
NQU91_00635	COG0702	epimerase
NQU91_00640	COG0281	malic enzyme
NQU91_00650	COG2205	protein histidine kinase activity
NQU91_00655	COG0745	RESPONSE REGULATOR receiver
NQU91_00660	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NQU91_00695	COG4310	Domain of unknown function (DUF2172)
NQU91_00715	COG2089	acid synthase
NQU91_00725	COG1083	cytidylyl-transferase
NQU91_00740	COG1028	Short-chain dehydrogenase reductase Sdr
NQU91_00745	COG0318	PFAM AMP-dependent synthetase and ligase
NQU91_00760	COG1215	transferase activity, transferring glycosyl groups
NQU91_00765	COG1442	glycosyl transferase family 8
NQU91_00775	COG1215	transferase activity, transferring glycosyl groups
NQU91_00805	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
NQU91_00810	COG1086	Polysaccharide biosynthesis protein
NQU91_00815	COG0366	Alpha amylase catalytic
NQU91_00830	COG0443	Heat shock 70 kDa protein
NQU91_00835	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NQU91_00840	COG3045	CreA protein
NQU91_00860	COG0174	glutamine synthetase
NQU91_00880	COG3842	ATPase activity
NQU91_00885	COG1176	ABC-type spermidine putrescine transport system, permease component I
NQU91_00890	COG1177	transmembrane transport
NQU91_00895	COG2258	MOSC domain
NQU91_00910	COG2050	protein possibly involved in aromatic compounds catabolism
NQU91_00915	COG0514	ATP-dependent DNA helicase (RecQ)
NQU91_00925	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
NQU91_00935	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
NQU91_00940	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NQU91_00950	COG2239	Acts as a magnesium transporter
NQU91_00955	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NQU91_00955	COG1648	precorrin-2 dehydrogenase activity
NQU91_00960	COG2116	formate transmembrane transporter activity
NQU91_00975	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NQU91_00990	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
NQU91_00995	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
NQU91_01015	COG1595	DNA-templated transcription, initiation
NQU91_01020	COG3806	Anti-sigma factor
NQU91_01025	COG1968	undecaprenyl-diphosphatase activity
NQU91_01030	COG0667	Aldo Keto reductase
NQU91_01035	COG2017	converts alpha-aldose to the beta-anomer
NQU91_01040	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
NQU91_01050	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NQU91_01055	COG1609	Transcriptional regulator
NQU91_01060	COG3250	beta-galactosidase activity
NQU91_01110	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NQU91_01115	COG1288	antiporter activity
NQU91_01120	COG1438	arginine binding
NQU91_01125	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
NQU91_01130	COG0540	Belongs to the ATCase OTCase family
NQU91_01150	COG0688	phosphatidylethanolamine metabolic process
NQU91_01160	COG3040	lipid binding
NQU91_01165	COG2207	Transcriptional regulator
NQU91_01170	COG1979	alcohol dehydrogenase
NQU91_01175	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
NQU91_01180	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
NQU91_01190	COG3681	Belongs to the UPF0597 family
NQU91_01200	COG0446	pyridine nucleotide-disulphide oxidoreductase
NQU91_01205	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NQU91_01210	COG0564	pseudouridine synthase activity
NQU91_01220	COG0542	response to heat
NQU91_01225	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
NQU91_01230	COG2502	aspartate--ammonia ligase
NQU91_01235	COG1522	sequence-specific DNA binding
NQU91_01245	COG5413	integral membrane protein
NQU91_01270	COG2205	protein histidine kinase activity
NQU91_01280	COG2204	response regulator
NQU91_01295	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
NQU91_01325	COG0243	molybdopterin cofactor binding
NQU91_01330	COG3005	denitrification pathway
NQU91_01335	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NQU91_01355	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
NQU91_01360	COG0569	domain protein
NQU91_01365	COG0812	UDP-N-acetylmuramate dehydrogenase activity
NQU91_01390	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NQU91_01405	COG0250	Participates in transcription elongation, termination and antitermination
NQU91_01410	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
NQU91_01415	COG0081	regulation of translation
NQU91_01420	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
NQU91_01425	COG0222	ribosome binding
NQU91_01430	COG0085	RNA polymerase activity
NQU91_01435	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NQU91_01440	COG2964	Protein conserved in bacteria
NQU91_01445	COG0251	oxidation-reduction process
NQU91_01455	COG2923	Belongs to the DsrF TusC family
NQU91_01460	COG2168	tRNA wobble position uridine thiolation
NQU91_01465	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
NQU91_01470	COG0049	tRNA binding
NQU91_01475	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NQU91_01480	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NQU91_01485	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
NQU91_01520	COG2252	PERMEase
NQU91_01525	COG2376	Dihydroxyacetone kinase
NQU91_01530	COG1461	Dihydroxyacetone kinase
NQU91_01545	COG3284	Transcriptional regulator
NQU91_01555	COG2957	Belongs to the agmatine deiminase family
NQU91_01560	COG4221	oxidoreductase activity
NQU91_01565	COG0628	permease
NQU91_01570	COG0494	nUDIX hydrolase
NQU91_01595	COG0753	catalase activity
NQU91_01600	COG1247	-acetyltransferase
NQU91_01620	COG2199	diguanylate cyclase activity
NQU91_01620	COG2203	Gaf domain
NQU91_01630	COG3842	ATPase activity
NQU91_01640	COG1176	ABC-type spermidine putrescine transport system, permease component I
NQU91_01665	COG0583	DNA-binding transcription factor activity
NQU91_01675	COG1741	Belongs to the pirin family
NQU91_01680	COG2259	Doxx family
NQU91_01685	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
NQU91_01690	COG1074	ATP-dependent DNA helicase activity
NQU91_01695	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
NQU91_01705	COG0346	lactoylglutathione lyase activity
NQU91_01750	COG4251	negative regulation of phosphorylation
NQU91_01750	COG2203	Gaf domain
NQU91_01750	COG5001	Diguanylate cyclase
NQU91_01750	COG3706	GGDEF domain
NQU91_01755	COG4771	TonB-dependent receptor
NQU91_01760	COG1278	Cold shock
NQU91_01785	COG0629	single-stranded DNA binding
NQU91_01790	COG2197	response regulator
NQU91_01795	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NQU91_01805	COG3047	cAMP biosynthetic process
NQU91_01810	COG0840	transmembrane signaling receptor activity
NQU91_01835	COG3135	benzoate transporter
NQU91_01840	COG1396	sequence-specific DNA binding
NQU91_01870	COG2926	Belongs to the UPF0265 family
NQU91_01880	COG3028	Belongs to the UPF0307 family
NQU91_01885	COG0312	modulator of DNA gyrase
NQU91_01890	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NQU91_01895	COG5007	Belongs to the BolA IbaG family
NQU91_01905	COG2854	intermembrane phospholipid transfer
NQU91_01910	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
NQU91_01915	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
NQU91_01920	COG1127	ABC transporter
NQU91_01925	COG0517	IMP dehydrogenase activity
NQU91_01925	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
NQU91_01930	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
NQU91_01935	COG3117	lipopolysaccharide transmembrane transporter activity
NQU91_01940	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
NQU91_01945	COG1137	ATPase activity
NQU91_01950	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
NQU91_01960	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU91_01965	COG1660	Displays ATPase and GTPase activities
NQU91_01970	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU91_01975	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU91_01975	COG3711	transcriptional antiterminator
NQU91_01990	COG3964	amidohydrolase
NQU91_02020	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NQU91_02025	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NQU91_02035	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
NQU91_02040	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
NQU91_02045	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
NQU91_02050	COG0723	plastoquinol--plastocyanin reductase activity
NQU91_02055	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
NQU91_02060	COG2857	Cytochrome c1
NQU91_02065	COG0625	glutathione transferase activity
NQU91_02070	COG2969	positive regulation of protein catabolic process
NQU91_02075	COG2823	Periplasmic or secreted lipoprotein
NQU91_02080	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
NQU91_02085	COG0792	nuclease activity
NQU91_02090	COG3107	peptidoglycan biosynthetic process
NQU91_02095	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
NQU91_02105	COG2001	Belongs to the MraZ family
NQU91_02110	COG0275	rRNA processing
NQU91_02115	COG3116	cell division
NQU91_02120	COG0768	penicillin binding
NQU91_02130	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
NQU91_02135	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NQU91_02140	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
NQU91_02145	COG0772	Belongs to the SEDS family
NQU91_02150	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NQU91_02155	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
NQU91_02160	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
NQU91_02165	COG0849	cell division
NQU91_02170	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NQU91_02175	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
NQU91_02185	COG0653	protein targeting
NQU91_02195	COG0494	nUDIX hydrolase
NQU91_02200	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
NQU91_02205	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
NQU91_02220	COG1459	type II secretion system
NQU91_02225	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NQU91_02250	COG2186	Transcriptional regulator
NQU91_02255	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
NQU91_02260	COG0508	dehydrogenase complex catalyzes the overall conversion of
NQU91_02265	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NQU91_02275	COG0840	transmembrane signaling receptor activity
NQU91_02280	COG0840	transmembrane signaling receptor activity
NQU91_02285	COG1752	Esterase of the alpha-beta hydrolase superfamily
NQU91_02290	COG1049	propionate catabolic process, 2-methylcitrate cycle
NQU91_02295	COG2200	EAL domain
NQU91_02305	COG1280	lysine exporter protein (LysE YggA)
NQU91_02315	COG0523	cobalamin synthesis protein
NQU91_02320	COG0477	Major facilitator Superfamily
NQU91_02335	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NQU91_02340	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
NQU91_02380	COG3314	Sporulation integral membrane protein YlbJ
NQU91_02385	COG0835	chemotaxis
NQU91_02385	COG0784	Response regulator, receiver
NQU91_02395	COG1444	tRNA N-acetyltransferase activity
NQU91_02420	COG1803	Methylglyoxal synthase
NQU91_02435	COG0252	asparaginase activity
NQU91_02455	COG1263	PTS System
NQU91_02455	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NQU91_02460	COG0366	Alpha amylase catalytic
NQU91_02465	COG0110	maltose O-acetyltransferase activity
NQU91_02470	COG1522	sequence-specific DNA binding
NQU91_02475	COG5006	permease, DMT superfamily
NQU91_02485	COG1012	belongs to the aldehyde dehydrogenase family
NQU91_02490	COG1177	transmembrane transport
NQU91_02495	COG1176	ABC-type spermidine putrescine transport system, permease component I
NQU91_02500	COG3842	ATPase activity
NQU91_02505	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
NQU91_02510	COG0583	DNA-binding transcription factor activity
NQU91_02515	COG1757	Na H antiporter
NQU91_02555	COG0297	glycogen (starch) synthase activity
NQU91_02560	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
NQU91_02565	COG2813	Specifically methylates the guanine in position
NQU91_02570	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NQU91_02575	COG4251	negative regulation of phosphorylation
NQU91_02575	COG2203	Gaf domain
NQU91_02575	COG3706	GGDEF domain
NQU91_02575	COG5001	Diguanylate cyclase
NQU91_02585	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NQU91_02595	COG2995	paraquat-inducible protein a
NQU91_02600	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
NQU91_02600	COG3008	intermembrane lipid transfer
NQU91_02605	COG3009	Protein conserved in bacteria
NQU91_02620	COG3240	lipase activity
NQU91_02625	COG3111	PFAM Bacterial OB fold (BOF) protein
NQU91_02635	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
NQU91_02640	COG1194	a g-specific adenine glycosylase
NQU91_02650	COG3267	Type II secretory pathway component ExeA
NQU91_02650	COG3409	Peptidoglycan-binding domain 1 protein
NQU91_02655	COG0617	tRNA 3'-terminal CCA addition
NQU91_02670	COG1346	cytolysis
NQU91_02675	COG1380	Effector of murein hydrolase LrgA
NQU91_02680	COG0583	DNA-binding transcription factor activity
NQU91_02710	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NQU91_02715	COG0306	phosphate transporter
NQU91_02720	COG1392	Phosphate transport regulator
NQU91_02735	COG1560	Kdo2-lipid A biosynthetic process
NQU91_02740	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
NQU91_02740	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
NQU91_02745	COG1538	Outer membrane efflux protein
NQU91_02750	COG0494	nUDIX hydrolase
NQU91_02755	COG3151	Protein conserved in bacteria
NQU91_02765	COG3150	esterase
NQU91_02770	COG1051	belongs to the nudix hydrolase family
NQU91_02785	COG1566	PFAM secretion protein HlyD family protein
NQU91_02790	COG1289	transmembrane transporter activity
NQU91_02805	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
NQU91_02840	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NQU91_02865	COG0204	Acyl-transferase
NQU91_02870	COG1842	Phage shock protein A
NQU91_02885	COG2827	Endonuclease containing a URI domain
NQU91_02895	COG2962	Rard protein
NQU91_02900	COG1573	uracil-dna glycosylase
NQU91_02905	COG0697	spore germination
NQU91_02910	COG0583	DNA-binding transcription factor activity
NQU91_02915	COG1108	ABC-type Mn2 Zn2 transport systems permease components
NQU91_02920	COG1121	(ABC) transporter
NQU91_02925	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
NQU91_02945	COG0739	heme binding
NQU91_02955	COG3068	Protein conserved in bacteria
NQU91_02980	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
NQU91_02985	COG1546	Belongs to the CinA family
NQU91_02990	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NQU91_03000	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NQU91_03005	COG0527	aspartate kinase activity
NQU91_03010	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
NQU91_03045	COG1686	Belongs to the peptidase S11 family
NQU91_03050	COG0586	Pfam SNARE associated Golgi protein
NQU91_03055	COG1253	flavin adenine dinucleotide binding
NQU91_03060	COG0525	valine-tRNA ligase activity
NQU91_03065	COG2927	DNA polymerase III (CHI subunit)
NQU91_03070	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
NQU91_03075	COG0795	lipopolysaccharide-transporting ATPase activity
NQU91_03080	COG0795	lipopolysaccharide-transporting ATPase activity
NQU91_03095	COG0582	viral genome integration into host DNA
NQU91_03105	COG1160	GTP binding
NQU91_03200	COG0004	ammonium transporteR
NQU91_03205	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NQU91_03215	COG2165	general secretion pathway protein
NQU91_03220	COG0084	hydrolase, TatD family'
NQU91_03225	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NQU91_03235	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
NQU91_03240	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
NQU91_03245	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
NQU91_03250	COG0813	purine-nucleoside phosphorylase activity
NQU91_03255	COG5002	protein histidine kinase activity
NQU91_03255	COG5001	Diguanylate cyclase
NQU91_03255	COG3447	MASE1 domain protein
NQU91_03265	COG0560	Phosphoserine phosphatase
NQU91_03290	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
NQU91_03300	COG0776	regulation of translation
NQU91_03315	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NQU91_03320	COG0735	belongs to the Fur family
NQU91_03345	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
NQU91_03350	COG0513	Belongs to the DEAD box helicase family
NQU91_03355	COG3022	response to hydroperoxide
NQU91_03370	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
NQU91_03375	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NQU91_03380	COG0762	integral membrane protein
NQU91_03385	COG1872	DUF167
NQU91_03400	COG4166	transmembrane transport
NQU91_03420	COG1024	Enoyl-CoA hydratase
NQU91_03435	COG4221	oxidoreductase activity
NQU91_03440	COG0442	prolyl-tRNA aminoacylation
NQU91_03445	COG0840	transmembrane signaling receptor activity
NQU91_03450	COG0632	four-way junction helicase activity
NQU91_03455	COG2255	four-way junction helicase activity
NQU91_03460	COG1271	oxidase subunit
NQU91_03465	COG1294	oxidase, subunit
NQU91_03470	COG4890	Cyd operon protein YbgT
NQU91_03475	COG3790	cyd operon protein YbgE
NQU91_03480	COG0824	Thioesterase
NQU91_03485	COG0811	peptide transport
NQU91_03500	COG0823	Involved in the tonB-independent uptake of proteins
NQU91_03505	COG2885	chlorophyll binding
NQU91_03510	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
NQU91_03585	COG0840	transmembrane signaling receptor activity
NQU91_03590	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
NQU91_03595	COG0676	glucose-6-phosphate 1-epimerase activity
NQU91_03600	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
NQU91_03605	COG1640	4-alpha-glucanotransferase
NQU91_03610	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
NQU91_03630	COG1051	belongs to the nudix hydrolase family
NQU91_03635	COG2130	NADP-dependent
NQU91_03640	COG1764	response to oxidative stress
NQU91_03645	COG1846	Transcriptional regulator
NQU91_03680	COG0561	phosphatase activity
NQU91_03695	COG0733	neurotransmitter:sodium symporter activity
NQU91_03705	COG0733	neurotransmitter:sodium symporter activity
NQU91_03730	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NQU91_03745	COG1794	racemase activity, acting on amino acids and derivatives
NQU91_03760	COG2731	YhcH YjgK YiaL family protein
NQU91_03770	COG0668	transmembrane transport
NQU91_03780	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NQU91_03830	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
NQU91_03840	COG0488	(ABC) transporter
NQU91_03845	COG0517	IMP dehydrogenase activity
NQU91_03845	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
NQU91_03850	COG1585	Membrane protein implicated in regulation of membrane protease activity
NQU91_03855	COG0330	HflC and HflK could
NQU91_03860	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NQU91_03860	COG1648	precorrin-2 dehydrogenase activity
NQU91_03865	COG0175	sulfate reduction
NQU91_03870	COG2895	sulfate adenylyltransferase (ATP) activity
NQU91_03875	COG3273	potassium ion transport
NQU91_03875	COG0471	metal ion transport
NQU91_03880	COG0529	Catalyzes the synthesis of activated sulfate
NQU91_03900	COG0840	transmembrane signaling receptor activity
NQU91_03920	COG1136	(ABC) transporter
NQU91_03935	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
NQU91_03950	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
NQU91_03955	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
NQU91_03960	COG0163	prenyltransferase activity
NQU91_03975	COG1131	(ABC) transporter
NQU91_03980	COG0842	Transport permease protein
NQU91_03985	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
NQU91_03990	COG1924	4 iron, 4 sulfur cluster binding
NQU91_04010	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
NQU91_04015	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
NQU91_04030	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NQU91_04035	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
NQU91_04040	COG1489	DNA binding
NQU91_04050	COG1643	Atp-dependent helicase
NQU91_04055	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NQU91_04060	COG0346	lactoylglutathione lyase activity
NQU91_04070	COG2076	Multidrug Resistance protein
NQU91_04080	COG0784	Response regulator, receiver
NQU91_04080	COG3437	response regulator, receiver
NQU91_04090	COG0671	phosphoesterase, PA-phosphatase related
NQU91_04105	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
NQU91_04110	COG0038	chloride channel
NQU91_04120	COG0316	Belongs to the HesB IscA family
NQU91_04145	COG1280	lysine exporter protein (LysE YggA)
NQU91_04150	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
NQU91_04165	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NQU91_04195	COG0745	RESPONSE REGULATOR receiver
NQU91_04200	COG3104	oligopeptide transport
NQU91_04205	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NQU91_04210	COG1555	photosystem II stabilization
NQU91_04220	COG2350	Protein conserved in bacteria
NQU91_04225	COG2917	probably involved in intracellular septation
NQU91_04230	COG0076	glutamate decarboxylase activity
NQU91_04235	COG1272	protein, Hemolysin III
NQU91_04240	COG0569	domain protein
NQU91_04240	COG2985	domain, Protein
NQU91_04250	COG0784	Response regulator, receiver
NQU91_04250	COG0835	chemotaxis
NQU91_04255	COG2755	lipolytic protein G-D-S-L family
NQU91_04260	COG4181	ATPase activity
NQU91_04265	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
NQU91_04270	COG1090	epimerase
NQU91_04275	COG2200	EAL domain
NQU91_04280	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NQU91_04285	COG2234	aminopeptidase activity
NQU91_04285	COG4935	Belongs to the peptidase S8 family
NQU91_04290	COG0220	tRNA (guanine-N7-)-methyltransferase activity
NQU91_04295	COG3171	Protein conserved in bacteria
NQU91_04300	COG2066	Belongs to the glutaminase family
NQU91_04305	COG2897	thiosulfate sulfurtransferase activity
NQU91_04320	COG1132	(ABC) transporter
NQU91_04345	COG0582	viral genome integration into host DNA
NQU91_04375	COG4974	Belongs to the 'phage' integrase family
NQU91_04410	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NQU91_04435	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
NQU91_04440	COG5001	Diguanylate cyclase
NQU91_04440	COG3300	MHYT domain
NQU91_04450	COG2207	Transcriptional regulator
NQU91_04455	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NQU91_04460	COG3059	membrane
NQU91_04475	COG4628	conserved protein (DUF2132)
NQU91_04480	COG0688	phosphatidylethanolamine metabolic process
NQU91_04485	COG1162	GTPase activity
NQU91_04490	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
NQU91_04530	COG1278	Cold shock
NQU91_04540	COG0840	transmembrane signaling receptor activity
NQU91_04545	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NQU91_04550	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NQU91_04600	COG0848	biopolymer transport protein
NQU91_04605	COG0811	peptide transport
NQU91_04610	COG0811	peptide transport
NQU91_04620	COG4206	TonB-dependent receptor
NQU91_04625	COG4174	ABC transporter (Permease)
NQU91_04630	COG4239	(ABC) transporter, permease
NQU91_04640	COG0444	Belongs to the ABC transporter superfamily
NQU91_04645	COG4608	Belongs to the ABC transporter superfamily
NQU91_04650	COG2195	Cleaves the N-terminal amino acid of tripeptides
NQU91_04655	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
NQU91_04660	COG1073	alpha beta
NQU91_04700	COG0243	molybdopterin cofactor binding
NQU91_04715	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NQU91_04715	COG1116	anion transmembrane transporter activity
NQU91_04720	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NQU91_04725	COG1116	anion transmembrane transporter activity
NQU91_04730	COG2146	nitrite reductase [NAD(P)H] activity
NQU91_04730	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NQU91_04735	COG2146	nitrite reductase [NAD(P)H] activity
NQU91_04735	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NQU91_04740	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NQU91_04745	COG2313	pseudouridylate synthase activity
NQU91_04755	COG1858	cytochrome C peroxidase
NQU91_04790	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NQU91_04795	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NQU91_04820	COG2986	histidine ammonia-lyase
NQU91_04845	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
NQU91_04855	COG1028	Short-chain dehydrogenase reductase Sdr
NQU91_04870	COG0521	Mo-molybdopterin cofactor biosynthetic process
NQU91_04880	COG2966	Psort location CytoplasmicMembrane, score
NQU91_04885	COG3610	response to peptide
NQU91_04905	COG4175	Glycine betaine
NQU91_04910	COG4176	ABC-type proline glycine betaine transport system permease component
NQU91_04915	COG2113	Glycine betaine
NQU91_04920	COG0175	sulfate reduction
NQU91_04925	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NQU91_04930	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
NQU91_04935	COG0384	phenazine biosynthesis protein PhzF
NQU91_04940	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
NQU91_04955	COG0786	glutamate:sodium symporter activity
NQU91_04960	COG0252	asparaginase activity
NQU91_04965	COG3139	Protein of unknown function (DUF1315)
NQU91_04985	COG0616	signal peptide processing
NQU91_04990	COG1902	pentaerythritol trinitrate reductase activity
NQU91_04990	COG0446	pyridine nucleotide-disulphide oxidoreductase
NQU91_04995	COG0778	Nitroreductase
NQU91_05010	COG2264	protein methyltransferase activity
NQU91_05015	COG0604	alcohol dehydrogenase
NQU91_05020	COG0583	DNA-binding transcription factor activity
NQU91_05025	COG1263	PTS System
NQU91_05025	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NQU91_05025	COG2190	(PTS) system
NQU91_05030	COG4145	pantothenate transmembrane transporter activity
NQU91_05040	COG0439	Biotin carboxylase
NQU91_05045	COG0511	ligase activity, forming carbon-carbon bonds
NQU91_05050	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
NQU91_05055	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NQU91_05065	COG5001	Diguanylate cyclase
NQU91_05065	COG3300	MHYT domain
NQU91_05085	COG3381	protein complex oligomerization
NQU91_05100	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
NQU91_05110	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
NQU91_05115	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NQU91_05115	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NQU91_05135	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
NQU91_05140	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NQU91_05145	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
NQU91_05150	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
NQU91_05155	COG4172	Belongs to the ABC transporter superfamily
NQU91_05165	COG0601	transmembrane transport
NQU91_05175	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NQU91_05180	COG0142	geranyltranstransferase activity
NQU91_05185	COG1722	exodeoxyribonuclease VII activity
NQU91_05190	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
NQU91_05195	COG1360	Flagellar Motor Protein
NQU91_05210	COG1534	Rna-binding protein
NQU91_05215	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
NQU91_05225	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
NQU91_05230	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NQU91_05235	COG0149	triose-phosphate isomerase activity
NQU91_05240	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
NQU91_05255	COG0779	Required for maturation of 30S ribosomal subunits
NQU91_05260	COG0195	Participates in both transcription termination and antitermination
NQU91_05265	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NQU91_05270	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NQU91_05275	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NQU91_05280	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
NQU91_05285	COG1185	polyribonucleotide nucleotidyltransferase activity
NQU91_05290	COG2211	Major facilitator Superfamily
NQU91_05300	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
NQU91_05310	COG0114	fumarate hydratase activity
NQU91_05320	COG1966	Carbon starvation protein
NQU91_05325	COG3279	Response regulator of the LytR AlgR family
NQU91_05330	COG3275	phosphorelay sensor kinase activity
NQU91_05395	COG0312	modulator of DNA gyrase
NQU91_05400	COG0312	modulator of DNA gyrase
NQU91_05410	COG4974	Belongs to the 'phage' integrase family
NQU91_05420	COG1970	mechanosensitive ion channel activity
NQU91_05425	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NQU91_05435	COG0789	Transcriptional regulator
NQU91_05450	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
NQU91_05455	COG3545	Serine hydrolase
NQU91_05465	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
NQU91_05470	COG0321	lipoyl(octanoyl) transferase activity
NQU91_05475	COG2921	Belongs to the UPF0250 family
NQU91_05480	COG1686	Belongs to the peptidase S11 family
NQU91_05485	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
NQU91_05490	COG2951	lytic endotransglycosylase activity
NQU91_05495	COG0772	Belongs to the SEDS family
NQU91_05500	COG0772	Belongs to the SEDS family
NQU91_05505	COG0768	penicillin binding
NQU91_05510	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
NQU91_05515	COG0799	negative regulation of ribosome biogenesis
NQU91_05520	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
NQU91_05540	COG0495	leucyl-tRNA aminoacylation
NQU91_05545	COG2888	peptidyl-tyrosine sulfation
NQU91_05550	COG0815	Transfers the fatty acyl group on membrane lipoproteins
NQU91_05555	COG4535	Mg2 and Co2 transporter CorC
NQU91_05560	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NQU91_05565	COG1702	phosphate starvation-inducible protein PhoH
NQU91_05570	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
NQU91_05575	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NQU91_05580	COG1335	isochorismatase
NQU91_05590	COG3706	GGDEF domain
NQU91_05605	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NQU91_05625	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NQU91_05635	COG3647	Membrane
NQU91_05640	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NQU91_05650	COG0516	GMP reductase activity
NQU91_05660	COG0642	Histidine kinase
NQU91_05700	COG3214	Protein conserved in bacteria
NQU91_05725	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
NQU91_05730	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
NQU91_05735	COG1053	succinate dehydrogenase
NQU91_05745	COG0584	glycerophosphoryl diester phosphodiesterase
NQU91_05750	COG3264	Mechanosensitive ion channel
NQU91_05750	COG1511	domain protein
NQU91_05760	COG0739	heme binding
NQU91_05775	COG0583	DNA-binding transcription factor activity
NQU91_05795	COG0583	DNA-binding transcription factor activity
NQU91_05800	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
NQU91_05830	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
NQU91_05835	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
NQU91_05845	COG0338	D12 class N6 adenine-specific DNA methyltransferase
NQU91_05855	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
NQU91_05865	COG0180	Tryptophanyl-tRNA synthetase
NQU91_05880	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NQU91_05890	COG1012	belongs to the aldehyde dehydrogenase family
NQU91_05940	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NQU91_05950	COG0674	pyruvate-flavodoxin oxidoreductase activity
NQU91_05950	COG1013	pyruvate-flavodoxin oxidoreductase activity
NQU91_05950	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NQU91_05950	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
NQU91_05960	COG0366	Alpha amylase catalytic
NQU91_05990	COG0471	metal ion transport
NQU91_05990	COG0490	domain, Protein
NQU91_06035	COG0012	GTP binding
NQU91_06040	COG0193	aminoacyl-tRNA hydrolase activity
NQU91_06045	COG0737	Belongs to the 5'-nucleotidase family
NQU91_06050	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NQU91_06060	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
NQU91_06065	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
NQU91_06070	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
NQU91_06075	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
NQU91_06080	COG2890	protein-(glutamine-N5) methyltransferase activity
NQU91_06090	COG2912	Transglutaminase-like superfamily
NQU91_06105	COG1301	dicarboxylic acid transport
NQU91_06115	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NQU91_06130	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
NQU91_06135	COG1115	amino acid carrier protein
NQU91_06150	COG0714	Associated with various cellular activities
NQU91_06175	COG3104	oligopeptide transport
NQU91_06180	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NQU91_06185	COG1678	Uncharacterized ACR, COG1678
NQU91_06195	COG0189	ligase activity
NQU91_06200	COG1385	rRNA (uridine-N3-)-methyltransferase activity
NQU91_06210	COG3091	SprT-like family
NQU91_06220	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
NQU91_06240	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
NQU91_06245	COG0739	heme binding
NQU91_06250	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NQU91_06255	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
NQU91_06255	COG3408	Glycogen debranching enzyme
NQU91_06265	COG1881	PFAM PEBP family protein
NQU91_06270	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
NQU91_06275	COG0583	DNA-binding transcription factor activity
NQU91_06285	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
NQU91_06295	COG0583	DNA-binding transcription factor activity
NQU91_06300	COG1028	Short-chain dehydrogenase reductase Sdr
NQU91_06305	COG0616	signal peptide processing
NQU91_06310	COG3724	N-succinylarginine dihydrolase activity
NQU91_06330	COG0840	transmembrane signaling receptor activity
NQU91_06340	COG2971	BadF BadG BcrA BcrD
NQU91_06350	COG4608	Belongs to the ABC transporter superfamily
NQU91_06355	COG0444	Belongs to the ABC transporter superfamily
NQU91_06360	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NQU91_06365	COG0601	transmembrane transport
NQU91_06370	COG4166	transmembrane transport
NQU91_06375	COG0784	Response regulator, receiver
NQU91_06375	COG2205	protein histidine kinase activity
NQU91_06405	COG3220	belongs to the UPF0276 family
NQU91_06440	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
NQU91_06445	COG1289	transmembrane transporter activity
NQU91_06450	COG0303	'Molybdopterin
NQU91_06455	COG0746	molybdenum cofactor guanylyltransferase activity
NQU91_06465	COG4662	Binding-protein-dependent transport system inner membrane component
NQU91_06475	COG2204	response regulator
NQU91_06480	COG3852	Histidine kinase
NQU91_06490	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
NQU91_06525	COG3383	formate dehydrogenase (NAD+) activity
NQU91_06525	COG3383	formate dehydrogenase (NAD+) activity
NQU91_06530	COG0437	4 iron, 4 sulfur cluster binding
NQU91_06545	COG0281	malic enzyme
NQU91_06565	COG2706	6-phosphogluconolactonase activity
NQU91_06575	COG1196	nuclear chromosome segregation
NQU91_06575	COG3264	Mechanosensitive ion channel
NQU91_06580	COG0469	pyruvate kinase activity
NQU91_06595	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NQU91_06595	COG4651	solute:proton antiporter activity
NQU91_06605	COG2974	May be involved in recombination
NQU91_06615	COG0420	3'-5' exonuclease activity
NQU91_06620	COG0419	ATPase involved in DNA repair
NQU91_06630	COG3038	cytochrome b561
NQU91_06645	COG2190	(PTS) system
NQU91_06655	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU91_06660	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
NQU91_06665	COG0542	response to heat
NQU91_06680	COG1720	tRNA m6t6A37 methyltransferase activity
NQU91_06700	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
NQU91_06705	COG4988	ABC transporter
NQU91_06720	COG0745	RESPONSE REGULATOR receiver
NQU91_06730	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NQU91_06745	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
NQU91_06750	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
NQU91_06760	COG0083	homoserine kinase activity
NQU91_06765	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
NQU91_06785	COG0488	(ABC) transporter
NQU91_06790	COG0515	serine threonine protein kinase
NQU91_06790	COG2815	serine threonine protein kinase
NQU91_06810	COG0813	purine-nucleoside phosphorylase activity
NQU91_06825	COG0784	Response regulator, receiver
NQU91_06825	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NQU91_06825	COG2198	Histidine kinase
NQU91_06825	COG2205	protein histidine kinase activity
NQU91_06830	COG2205	protein histidine kinase activity
NQU91_06830	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NQU91_06835	COG3384	dioxygenase
NQU91_06845	COG1283	sodium-dependent phosphate transmembrane transporter activity
NQU91_06855	COG0531	amino acid
NQU91_06865	COG0531	amino acid
NQU91_06885	COG1917	Cupin 2, conserved barrel domain protein
NQU91_06885	COG1396	sequence-specific DNA binding
NQU91_06890	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NQU91_06905	COG3152	Membrane
NQU91_06930	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NQU91_06935	COG2375	cellular response to nickel ion
NQU91_06945	COG0577	efflux transmembrane transporter activity
NQU91_06945	COG1136	(ABC) transporter
NQU91_06950	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NQU91_06960	COG1227	inorganic diphosphatase activity
NQU91_06965	COG0497	DNA recombination
NQU91_06970	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NQU91_06975	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
NQU91_06980	COG0443	Heat shock 70 kDa protein
NQU91_06985	COG0484	heat shock protein binding
NQU91_07015	COG1285	pathogenesis
NQU91_07030	COG0640	Transcriptional regulator
NQU91_07060	COG0095	Lipoate-protein ligase
NQU91_07080	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NQU91_07085	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NQU91_07105	COG0708	Exodeoxyribonuclease III
NQU91_07120	COG2211	Major facilitator Superfamily
NQU91_07165	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
NQU91_07170	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
NQU91_07175	COG1845	cytochrome c oxidase, subunit III
NQU91_07180	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
NQU91_07185	COG0109	protoheme IX farnesyltransferase activity
NQU91_07190	COG2814	Major facilitator Superfamily
NQU91_07200	COG2198	Histidine kinase
NQU91_07200	COG2205	protein histidine kinase activity
NQU91_07200	COG0784	Response regulator, receiver
NQU91_07205	COG1879	ABC-type sugar transport system periplasmic component
NQU91_07215	COG0745	RESPONSE REGULATOR receiver
NQU91_07220	COG3005	denitrification pathway
NQU91_07230	COG3381	protein complex oligomerization
NQU91_07270	COG2003	Belongs to the UPF0758 family
NQU91_07305	COG0583	DNA-binding transcription factor activity
NQU91_07320	COG0549	Belongs to the carbamate kinase family
NQU91_07325	COG1304	FMN binding
NQU91_07330	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
NQU91_07335	COG1335	isochorismatase
NQU91_07355	COG3311	Transcriptional regulator
NQU91_07370	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NQU91_07410	COG0159	tryptophan synthase activity
NQU91_07415	COG0133	tryptophan synthase activity
NQU91_07420	COG0134	indole-3-glycerol-phosphate synthase activity
NQU91_07420	COG0135	phosphoribosylanthranilate isomerase activity
NQU91_07425	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NQU91_07430	COG0512	Glutamine amidotransferase of anthranilate synthase
NQU91_07430	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NQU91_07435	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
NQU91_07445	COG0009	L-threonylcarbamoyladenylate synthase
NQU91_07455	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NQU91_07470	COG1946	Acyl-CoA thioesterase
NQU91_07485	COG1309	transcriptional regulator
NQU91_07490	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NQU91_07495	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NQU91_07550	COG2003	Belongs to the UPF0758 family
NQU91_07570	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
NQU91_07585	COG0583	DNA-binding transcription factor activity
NQU91_07590	COG4584	PFAM Integrase catalytic
NQU91_07595	COG1484	DNA-dependent DNA replication
NQU91_07615	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
NQU91_07625	COG1960	acyl-CoA dehydrogenase activity
NQU91_07630	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NQU91_07640	COG0469	pyruvate kinase activity
NQU91_07645	COG1737	Transcriptional regulator
NQU91_07670	COG1091	dTDP-4-dehydrorhamnose reductase activity
NQU91_07690	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
NQU91_07720	COG1215	transferase activity, transferring glycosyl groups
NQU91_07740	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NQU91_07745	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
NQU91_07760	COG3132	Protein of unknown function, DUF480
NQU91_07800	COG1278	Cold shock
NQU91_07830	COG0697	spore germination
NQU91_07835	COG1349	DNA-binding transcription factor activity
NQU91_07840	COG1882	Formate acetyltransferase
NQU91_07845	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NQU91_07850	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
NQU91_07880	COG0622	Phosphoesterase
NQU91_07895	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
NQU91_07900	COG0835	chemotaxis
NQU91_07900	COG0784	Response regulator, receiver
NQU91_07905	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
NQU91_07910	COG1815	bacterial-type flagellum-dependent cell motility
NQU91_07930	COG4787	bacterial-type flagellum-dependent cell motility
NQU91_07940	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
NQU91_07945	COG1706	bacterial-type flagellum-dependent cell motility
NQU91_07950	COG1705	Flagellar rod assembly protein muramidase FlgJ
NQU91_07950	COG3951	Flagellar rod assembly protein muramidase FlgJ
NQU91_07955	COG1256	bacterial-type flagellum assembly
NQU91_07965	COG2239	Acts as a magnesium transporter
NQU91_07975	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
NQU91_07980	COG2716	regulation of RNA biosynthetic process
NQU91_08005	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
NQU91_08010	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NQU91_08015	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
NQU91_08020	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
NQU91_08040	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
NQU91_08055	COG0590	tRNA wobble adenosine to inosine editing
NQU91_08060	COG0573	inorganic phosphate transmembrane transporter activity
NQU91_08065	COG0581	inorganic phosphate transmembrane transporter activity
NQU91_08070	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
NQU91_08075	COG0704	Plays a role in the regulation of phosphate uptake
NQU91_08080	COG1253	flavin adenine dinucleotide binding
NQU91_08095	COG0531	amino acid
NQU91_08110	COG1126	abc transporter atp-binding protein
NQU91_08115	COG0765	amino acid transport
NQU91_08120	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NQU91_08130	COG2271	Major facilitator Superfamily
NQU91_08145	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NQU91_08170	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
NQU91_08175	COG0477	Major facilitator Superfamily
NQU91_08180	COG0123	including yeast histone deacetylase and acetoin utilization protein
NQU91_08190	COG1199	ATP-dependent helicase activity
NQU91_08205	COG1448	Aminotransferase
NQU91_08210	COG0433	COG0433 Predicted ATPase
NQU91_08225	COG0658	competence protein
NQU91_08225	COG2333	competence protein COMEC
NQU91_08235	COG1663	tetraacyldisaccharide 4'-kinase activity
NQU91_08240	COG2835	tetraacyldisaccharide 4'-kinase activity
NQU91_08245	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
NQU91_08250	COG2197	response regulator
NQU91_08255	COG0322	excinuclease ABC activity
NQU91_08300	COG0437	4 iron, 4 sulfur cluster binding
NQU91_08305	COG3301	Polysulphide reductase, NrfD
NQU91_08310	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NQU91_08320	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NQU91_08325	COG0215	cysteine-tRNA ligase activity
NQU91_08340	COG1106	Psort location Cytoplasmic, score
NQU91_08360	COG2199	diguanylate cyclase activity
NQU91_08360	COG2203	Gaf domain
NQU91_08390	COG2119	membrane
NQU91_08395	COG0023	Translation Initiation Factor
NQU91_08420	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
NQU91_08435	COG2205	protein histidine kinase activity
NQU91_08435	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NQU91_08445	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
NQU91_08455	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NQU91_08460	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
NQU91_08465	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
NQU91_08470	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
NQU91_08475	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
NQU91_08485	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
NQU91_08490	COG0505	Belongs to the CarA family
NQU91_08495	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
NQU91_08500	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NQU91_08530	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NQU91_08535	COG0513	Belongs to the DEAD box helicase family
NQU91_08545	COG4104	PAAR repeat-containing protein
NQU91_08560	COG0789	Transcriptional regulator
NQU91_08575	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NQU91_08580	COG0765	amino acid transport
NQU91_08585	COG1126	abc transporter atp-binding protein
NQU91_08590	COG0493	'glutamate synthase
NQU91_08595	COG0067	glutamate synthase
NQU91_08595	COG0069	glutamate synthase activity
NQU91_08595	COG0070	glutamate synthase
NQU91_08600	COG1242	4 iron, 4 sulfur cluster binding
NQU91_08655	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
NQU91_08660	COG0574	Belongs to the PEP-utilizing enzyme family
NQU91_08660	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NQU91_08700	COG1464	Belongs to the NlpA lipoprotein family
NQU91_08705	COG0671	phosphoesterase, PA-phosphatase related
NQU91_08710	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
NQU91_08715	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NQU91_08725	COG0101	tRNA pseudouridine synthase activity
NQU91_08730	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
NQU91_08735	COG0285	dihydrofolate synthase activity
NQU91_08740	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
NQU91_08745	COG2920	part of a sulfur-relay system
NQU91_08750	COG1289	transmembrane transporter activity
NQU91_08755	COG0670	Belongs to the BI1 family
NQU91_08775	COG2194	sulfuric ester hydrolase activity
NQU91_08780	COG0392	lysyltransferase activity
NQU91_08780	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
NQU91_08790	COG0840	transmembrane signaling receptor activity
NQU91_08795	COG2199	diguanylate cyclase activity
NQU91_08795	COG2203	Gaf domain
NQU91_08800	COG0564	pseudouridine synthase activity
NQU91_08815	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
NQU91_08825	COG0625	glutathione transferase activity
NQU91_08830	COG0625	glutathione transferase activity
NQU91_08840	COG0367	asparagine synthase
NQU91_08850	COG4651	solute:proton antiporter activity
NQU91_08850	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NQU91_08855	COG0647	UMP catabolic process
NQU91_08860	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
NQU91_08865	COG1902	pentaerythritol trinitrate reductase activity
NQU91_08870	COG1253	flavin adenine dinucleotide binding
NQU91_08880	COG0277	FAD linked oxidase domain protein
NQU91_08880	COG0247	lactate metabolic process
NQU91_08890	COG2050	protein possibly involved in aromatic compounds catabolism
NQU91_08900	COG2056	Na+-H+ antiporter family
NQU91_08905	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
NQU91_08920	COG0346	lactoylglutathione lyase activity
NQU91_08925	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NQU91_08930	COG4660	Part of a membrane complex involved in electron transport
NQU91_08935	COG4659	FMN binding
NQU91_08940	COG4658	electron transport chain
NQU91_08950	COG2878	Part of a membrane complex involved in electron transport
NQU91_08955	COG4657	Part of a membrane complex involved in electron transport
NQU91_08960	COG0697	spore germination
NQU91_08980	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
NQU91_08985	COG1288	antiporter activity
NQU91_08990	COG0436	Aminotransferase
NQU91_09000	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
NQU91_09005	COG2027	D-alanyl-D-alanine carboxypeptidase
NQU91_09010	COG1061	Type III restriction enzyme res subunit
NQU91_09015	COG1566	PFAM secretion protein HlyD family protein
NQU91_09025	COG1966	Carbon starvation protein
NQU91_09030	COG3279	Response regulator of the LytR AlgR family
NQU91_09035	COG3275	phosphorelay sensor kinase activity
NQU91_09040	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
NQU91_09040	COG2199	diguanylate cyclase activity
NQU91_09045	COG1454	alcohol dehydrogenase
NQU91_09045	COG1012	belongs to the aldehyde dehydrogenase family
NQU91_09055	COG2095	MarC family integral membrane protein
NQU91_09065	COG0601	transmembrane transport
NQU91_09070	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NQU91_09085	COG0861	Integral membrane protein TerC family
NQU91_09090	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NQU91_09100	COG1301	dicarboxylic acid transport
NQU91_09115	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
NQU91_09130	COG0537	adenosine 5'-monophosphoramidase activity
NQU91_09165	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NQU91_09170	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NQU91_09180	COG2354	Protein conserved in bacteria
NQU91_09195	COG2233	PERMEase
NQU91_09200	COG3150	esterase
NQU91_09205	COG1252	NADH dehydrogenase
NQU91_09230	COG0393	Putative heavy-metal-binding
NQU91_09245	COG4667	esterase of the alpha-beta hydrolase superfamily
NQU91_09250	COG1619	proteins homologs of microcin C7 resistance protein MccF
NQU91_09255	COG1368	sulfuric ester hydrolase activity
NQU91_09265	COG0527	aspartate kinase activity
NQU91_09270	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
NQU91_09270	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
NQU91_09275	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NQU91_09295	COG0596	Alpha beta hydrolase
NQU91_09300	COG0346	lactoylglutathione lyase activity
NQU91_09310	COG0583	DNA-binding transcription factor activity
NQU91_09315	COG1620	l-lactate permease
NQU91_09320	COG0247	lactate metabolic process
NQU91_09325	COG1139	Iron-sulfur cluster binding protein
NQU91_09350	COG0577	efflux transmembrane transporter activity
NQU91_09355	COG1136	(ABC) transporter
NQU91_09365	COG2814	Major facilitator Superfamily
NQU91_09385	COG0672	)-iron permease
NQU91_09415	COG0659	secondary active sulfate transmembrane transporter activity
NQU91_09435	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NQU91_09440	COG0840	transmembrane signaling receptor activity
NQU91_09450	COG2201	protein-glutamate methylesterase activity
NQU91_09460	COG0835	chemotaxis
NQU91_09465	COG0840	transmembrane signaling receptor activity
NQU91_09465	COG3290	protein histidine kinase activity
NQU91_09470	COG0643	Histidine kinase
NQU91_09470	COG2198	Histidine kinase
NQU91_09480	COG0745	RESPONSE REGULATOR receiver
NQU91_09485	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
NQU91_09490	COG0437	4 iron, 4 sulfur cluster binding
NQU91_09495	COG5557	Pfam Polysulphide reductase, NrfD
NQU91_09500	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
NQU91_09505	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
NQU91_09510	COG1773	rubredoxin
NQU91_09520	COG0601	transmembrane transport
NQU91_09525	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NQU91_09530	COG0444	Belongs to the ABC transporter superfamily
NQU91_09535	COG1124	(ABC) transporter
NQU91_09540	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
NQU91_09550	COG0375	protein maturation
NQU91_09555	COG0309	Hydrogenase expression formation protein (HypE)
NQU91_09565	COG0298	carbon dioxide binding
NQU91_09570	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
NQU91_09580	COG1921	L-seryl-tRNASec selenium transferase activity
NQU91_09590	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
NQU91_09600	COG3260	NADH ubiquinone oxidoreductase 20
NQU91_09605	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NQU91_09610	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
NQU91_09610	COG3261	NADH dehydrogenase
NQU91_09615	COG0650	Formate hydrogenlyase subunit 4
NQU91_09620	COG0651	ATP synthesis coupled electron transport
NQU91_09625	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
NQU91_09630	COG3158	transport of potassium into the cell
NQU91_09645	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
NQU91_09670	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
NQU91_09675	COG0326	Molecular chaperone. Has ATPase activity
NQU91_09680	COG0563	adenylate kinase activity
NQU91_09685	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
NQU91_09695	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NQU91_09710	COG5001	Diguanylate cyclase
NQU91_09710	COG3300	MHYT domain
NQU91_09715	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
NQU91_09735	COG1021	2,3-dihydroxybenzoate-AMP ligase
NQU91_09740	COG1535	isochorismatase
NQU91_09740	COG3433	isochorismatase activity
NQU91_09745	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NQU91_09750	COG1028	Short-chain dehydrogenase reductase Sdr
NQU91_09760	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NQU91_09765	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NQU91_09775	COG1120	ATPase activity
NQU91_09780	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NQU91_09785	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NQU91_09790	COG4771	TonB-dependent receptor
NQU91_09830	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
NQU91_09835	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
NQU91_09840	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NQU91_09855	COG1570	exodeoxyribonuclease VII activity
NQU91_09860	COG0697	spore germination
NQU91_09880	COG3158	transport of potassium into the cell
NQU91_09885	COG0517	IMP dehydrogenase activity
NQU91_09885	COG0516	GMP reductase activity
NQU91_09890	COG0519	Catalyzes the synthesis of GMP from XMP
NQU91_09890	COG0518	GMP synthase (glutamine-hydrolyzing) activity
NQU91_09920	COG0500	methyltransferase
NQU91_09930	COG2062	phosphohistidine phosphatase, SixA
NQU91_09940	COG0697	spore germination
NQU91_09945	COG4166	transmembrane transport
NQU91_09950	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
NQU91_09955	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NQU91_09965	COG4591	ABC-type transport system involved in lipoprotein release permease component
NQU91_09970	COG1136	(ABC) transporter
NQU91_09975	COG4591	ABC-type transport system involved in lipoprotein release permease component
NQU91_09980	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
NQU91_09990	COG0544	peptidyl-prolyl cis-trans isomerase activity
NQU91_09995	COG0740	serine-type endopeptidase activity
NQU91_10000	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
NQU91_10005	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
NQU91_10010	COG0776	regulation of translation
NQU91_10015	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NQU91_10020	COG0488	(ABC) transporter
NQU91_10025	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NQU91_10030	COG3162	membrane
NQU91_10045	COG1024	Enoyl-CoA hydratase
NQU91_10065	COG3039	Transposase
NQU91_10075	COG1115	amino acid carrier protein
NQU91_10090	COG1584	GPR1 FUN34 yaaH family protein
NQU91_10125	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
NQU91_10130	COG1960	acyl-CoA dehydrogenase activity
NQU91_10140	COG1960	acyl-CoA dehydrogenase activity
NQU91_10145	COG1024	Enoyl-CoA hydratase
NQU91_10150	COG1024	Enoyl-CoA hydratase
NQU91_10160	COG1028	Short-chain dehydrogenase reductase Sdr
NQU91_10170	COG0730	response to heat
NQU91_10190	COG5001	Diguanylate cyclase
NQU91_10190	COG3300	MHYT domain
NQU91_10195	COG0583	DNA-binding transcription factor activity
NQU91_10200	COG2723	6-phospho-beta-galactosidase activity
NQU91_10205	COG5001	Diguanylate cyclase
NQU91_10205	COG3300	MHYT domain
NQU91_10215	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
NQU91_10225	COG0583	DNA-binding transcription factor activity
NQU91_10230	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
NQU91_10235	COG0673	inositol 2-dehydrogenase activity
NQU91_10240	COG0583	DNA-binding transcription factor activity
NQU91_10250	COG1560	Kdo2-lipid A biosynthetic process
NQU91_10255	COG1560	Kdo2-lipid A biosynthetic process
NQU91_10280	COG0417	DNA replication proofreading
NQU91_10310	COG0534	Mate efflux family protein
NQU91_10320	COG0307	riboflavin synthase, alpha
NQU91_10330	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NQU91_10335	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
NQU91_10340	COG0697	spore germination
NQU91_10345	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
NQU91_10390	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NQU91_10395	COG3099	Belongs to the UPF0263 family
NQU91_10400	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
NQU91_10405	COG2894	cell division
NQU91_10410	COG0850	regulation of cytokinetic process
NQU91_10415	COG3100	YcgL domain-containing protein
NQU91_10420	COG2951	lytic endotransglycosylase activity
NQU91_10425	COG1760	l-serine dehydratase
NQU91_10430	COG1760	l-serine dehydratase
NQU91_10435	COG3123	guanosine phosphorylase activity
NQU91_10455	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
NQU91_10460	COG2067	long-chain fatty acid transport protein
NQU91_10475	COG1595	DNA-templated transcription, initiation
NQU91_10505	COG0714	Associated with various cellular activities
NQU91_10510	COG0183	Belongs to the thiolase family
NQU91_10515	COG1024	Enoyl-CoA hydratase
NQU91_10515	COG1250	3-hydroxyacyl-CoA dehydrogenase
NQU91_10535	COG3829	transcription factor binding
NQU91_10540	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NQU91_10545	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
NQU91_10550	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NQU91_10560	COG0549	Belongs to the carbamate kinase family
NQU91_10565	COG0697	spore germination
NQU91_10570	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
NQU91_10570	COG3608	succinylglutamate desuccinylase aspartoacylase
NQU91_10575	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NQU91_10580	COG2068	MobA-Related Protein
NQU91_10585	COG0493	'glutamate synthase
NQU91_10585	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
NQU91_10590	COG0402	S-adenosylhomocysteine deaminase activity
NQU91_10595	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
NQU91_10600	COG2080	2 iron, 2 sulfur cluster binding
NQU91_10600	COG1529	Aldehyde oxidase and xanthine dehydrogenase
NQU91_10605	COG2233	PERMEase
NQU91_10610	COG0402	S-adenosylhomocysteine deaminase activity
NQU91_10615	COG2252	PERMEase
NQU91_10620	COG1529	Aldehyde oxidase and xanthine dehydrogenase
NQU91_10625	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
NQU91_10630	COG2080	2 iron, 2 sulfur cluster binding
NQU91_10640	COG3134	Outer membrane lipoprotein
NQU91_10650	COG1288	antiporter activity
NQU91_10655	COG0318	PFAM AMP-dependent synthetase and ligase
NQU91_10665	COG0140	phosphoribosyl-ATP diphosphatase activity
NQU91_10665	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
NQU91_10670	COG0107	imidazoleglycerol-phosphate synthase activity
NQU91_10675	COG0784	Response regulator, receiver
NQU91_10675	COG2198	Histidine kinase
NQU91_10675	COG2205	protein histidine kinase activity
NQU91_10680	COG2199	diguanylate cyclase activity
NQU91_10685	COG3437	response regulator, receiver
NQU91_10690	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
NQU91_10695	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
NQU91_10700	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
NQU91_10700	COG0131	Imidazoleglycerol-phosphate dehydratase
NQU91_10705	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NQU91_10710	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
NQU91_10715	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
NQU91_10725	COG1199	ATP-dependent helicase activity
NQU91_10730	COG1214	PFAM Peptidase M22, glycoprotease
NQU91_10740	COG2226	methyltransferase
NQU91_10740	COG0596	Alpha beta hydrolase
NQU91_10740	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NQU91_10745	COG0318	PFAM AMP-dependent synthetase and ligase
NQU91_10750	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
NQU91_10765	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NQU91_10770	COG2832	Protein of unknown function (DUF454)
NQU91_10775	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NQU91_10785	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
NQU91_10800	COG0517	IMP dehydrogenase activity
NQU91_10800	COG0617	tRNA 3'-terminal CCA addition
NQU91_10800	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
NQU91_10805	COG1643	Atp-dependent helicase
NQU91_10815	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
NQU91_10825	COG3437	response regulator, receiver
NQU91_10830	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NQU91_10835	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
NQU91_10840	COG0709	Synthesizes selenophosphate from selenide and ATP
NQU91_10855	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
NQU91_10865	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
NQU91_10875	COG1254	Belongs to the acylphosphatase family
NQU91_10880	COG0625	glutathione transferase activity
NQU91_10885	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NQU91_10885	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NQU91_10890	COG0489	protein tyrosine kinase activity
NQU91_10895	COG0572	uridine kinase
NQU91_10900	COG0717	Belongs to the dCTP deaminase family
NQU91_10905	COG0306	phosphate transporter
NQU91_10910	COG1530	ribonuclease E activity
NQU91_10915	COG0564	pseudouridine synthase activity
NQU91_10920	COG0546	phosphoglycolate phosphatase activity
NQU91_10925	COG0424	maF-like protein
NQU91_10930	COG2814	Major facilitator Superfamily
NQU91_10945	COG1399	metal-binding, possibly nucleic acid-binding protein
NQU91_10950	COG0333	Belongs to the bacterial ribosomal protein bL32 family
NQU91_10955	COG0416	fatty acid biosynthetic process
NQU91_10960	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NQU91_10970	COG1028	Short-chain dehydrogenase reductase Sdr
NQU91_10975	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NQU91_10985	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
NQU91_10990	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
NQU91_10995	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
NQU91_11000	COG0470	DNA polymerase III
NQU91_11005	COG0084	hydrolase, TatD family'
NQU91_11025	COG2801	Transposase and inactivated derivatives
NQU91_11035	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NQU91_11035	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
NQU91_11040	COG3008	intermembrane lipid transfer
NQU91_11045	COG2995	paraquat-inducible protein a
NQU91_11055	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
NQU91_11060	COG0372	Belongs to the citrate synthase family
NQU91_11105	COG4221	oxidoreductase activity
NQU91_11115	COG3141	response to X-ray
NQU91_11140	COG4128	Pfam Zonular occludens toxin
NQU91_11185	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NQU91_11220	COG4128	Pfam Zonular occludens toxin
NQU91_11230	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NQU91_11265	COG4128	Pfam Zonular occludens toxin
NQU91_11275	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NQU91_11310	COG4128	Pfam Zonular occludens toxin
NQU91_11320	COG1067	ATP-dependent peptidase activity
NQU91_11325	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
NQU91_11340	COG0488	(ABC) transporter
NQU91_11350	COG0116	Belongs to the methyltransferase superfamily
NQU91_11350	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
NQU91_11365	COG0167	dihydroorotate dehydrogenase activity
NQU91_11370	COG2902	Dehydrogenase
NQU91_11380	COG0308	aminopeptidase N
NQU91_11390	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
NQU91_11395	COG1956	GAF domain-containing protein
NQU91_11405	COG3278	Belongs to the heme-copper respiratory oxidase family
NQU91_11420	COG2010	Cytochrome c
NQU91_11445	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NQU91_11450	COG0589	response to stress
NQU91_11455	COG0037	tRNA processing
NQU91_11470	COG0625	glutathione transferase activity
NQU91_11475	COG1869	D-ribose catabolic process
NQU91_11480	COG1129	ABC transporter
NQU91_11485	COG1172	Belongs to the binding-protein-dependent transport system permease family
NQU91_11490	COG1879	ABC-type sugar transport system periplasmic component
NQU91_11495	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NQU91_11500	COG1609	Transcriptional regulator
NQU91_11505	COG3300	MHYT domain
NQU91_11505	COG5001	Diguanylate cyclase
NQU91_11530	COG0784	Response regulator, receiver
NQU91_11530	COG2205	protein histidine kinase activity
NQU91_11535	COG0776	regulation of translation
NQU91_11540	COG0072	phenylalanine-tRNA ligase activity
NQU91_11540	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NQU91_11545	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
NQU91_11550	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
NQU91_11555	COG0291	Belongs to the bacterial ribosomal protein bL35 family
NQU91_11560	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NQU91_11565	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NQU91_11590	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
NQU91_11600	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NQU91_11605	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NQU91_11610	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NQU91_11615	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
NQU91_11620	COG3313	Fe-S protein
NQU91_11625	COG2942	2-epimerase
NQU91_11630	COG3716	PTS system mannose fructose sorbose family IID component
NQU91_11635	COG3715	PTS system
NQU91_11640	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU91_11640	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NQU91_11655	COG1609	Transcriptional regulator
NQU91_11660	COG2140	Oxalate decarboxylase
NQU91_11665	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
NQU91_11665	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NQU91_11665	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NQU91_11670	COG1105	Belongs to the carbohydrate kinase PfkB family
NQU91_11675	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU91_11675	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU91_11680	COG1609	Transcriptional regulator
NQU91_11685	COG0814	amino acid
NQU91_11695	COG5654	RES domain protein
NQU91_11700	COG0513	Belongs to the DEAD box helicase family
NQU91_11710	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
NQU91_11715	COG2890	protein-(glutamine-N5) methyltransferase activity
NQU91_11720	COG2840	Smr protein MutS2
NQU91_11730	COG3706	GGDEF domain
NQU91_11760	COG2824	Alkylphosphonate utilization operon protein PhnA
NQU91_11770	COG0384	phenazine biosynthesis protein PhzF
NQU91_11800	COG0242	peptide deformylase activity
NQU91_11820	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
NQU91_11825	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
NQU91_11835	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
NQU91_11840	COG1434	Gram-negative-bacterium-type cell wall biogenesis
NQU91_11850	COG0205	6-phosphofructokinase activity
NQU91_11855	COG1473	amidohydrolase
NQU91_11860	COG1011	Hydrolase
NQU91_11865	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
NQU91_11925	COG3593	DNA synthesis involved in DNA repair
NQU91_11945	COG0583	DNA-binding transcription factor activity
NQU91_11950	COG0730	response to heat
NQU91_11955	COG3148	PFAM DTW domain containing protein
NQU91_11965	COG1181	Belongs to the D-alanine--D-alanine ligase family
NQU91_11975	COG0386	Belongs to the glutathione peroxidase family
NQU91_11980	COG0513	Belongs to the DEAD box helicase family
NQU91_11985	COG0456	acetyltransferase
NQU91_11995	COG1742	UPF0060 membrane protein
NQU91_12025	COG2329	Antibiotic biosynthesis monooxygenase
NQU91_12030	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
NQU91_12050	COG3243	poly(R)-hydroxyalkanoic acid synthase
NQU91_12060	COG2501	S4 domain
NQU91_12070	COG1132	(ABC) transporter
NQU91_12075	COG1132	(ABC) transporter
NQU91_12085	COG3118	belongs to the thioredoxin family
NQU91_12090	COG0471	metal ion transport
NQU91_12095	COG0058	SHG alpha-glucan phosphorylase activity
NQU91_12125	COG0814	amino acid
NQU91_12130	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
NQU91_12135	COG0514	ATP-dependent DNA helicase (RecQ)
NQU91_12140	COG2766	serine protein kinase
NQU91_12150	COG2719	SpoVR family
NQU91_12155	COG2186	Transcriptional regulator
NQU91_12160	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
NQU91_12165	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
NQU91_12170	COG0586	Pfam SNARE associated Golgi protein
NQU91_12180	COG0556	nucleotide-excision repair
NQU91_12190	COG0569	domain protein
NQU91_12190	COG2985	domain, Protein
NQU91_12195	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
NQU91_12215	COG4565	transcriptional regulatory protein
NQU91_12220	COG3290	protein histidine kinase activity
NQU91_12225	COG1846	Transcriptional regulator
NQU91_12225	COG1940	carbohydrate kinase activity
NQU91_12230	COG0840	transmembrane signaling receptor activity
NQU91_12235	COG3012	SEC-C Motif Domain Protein
NQU91_12240	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
NQU91_12245	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
NQU91_12250	COG0247	lactate metabolic process
NQU91_12270	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
NQU91_12275	COG0437	4 iron, 4 sulfur cluster binding
NQU91_12280	COG3301	Polysulphide reductase, NrfD
NQU91_12285	COG1138	Cytochrome C-type biogenesis protein
NQU91_12290	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NQU91_12295	COG3088	subunit of a heme lyase
NQU91_12295	COG4235	cytochrome complex assembly
NQU91_12300	COG1051	belongs to the nudix hydrolase family
NQU91_12310	COG3033	Beta-eliminating lyase
NQU91_12320	COG3046	protein related to deoxyribodipyrimidine photolyase
NQU91_12325	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NQU91_12340	COG0517	IMP dehydrogenase activity
NQU91_12340	COG0516	GMP reductase activity
NQU91_12355	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
NQU91_12370	COG4774	siderophore transport
NQU91_12385	COG0583	DNA-binding transcription factor activity
NQU91_12390	COG2910	NAD(P)H-binding
NQU91_12405	COG0612	Peptidase, M16
NQU91_12410	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NQU91_12420	COG1944	ATP diphosphatase activity
NQU91_12425	COG2116	formate transmembrane transporter activity
NQU91_12430	COG1882	Formate acetyltransferase
NQU91_12435	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NQU91_12445	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
NQU91_12455	COG1840	ABC-type Fe3 transport system, periplasmic component
NQU91_12460	COG3842	ATPase activity
NQU91_12470	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NQU91_12475	COG2983	Belongs to the UPF0260 family
NQU91_12485	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
NQU91_12490	COG0045	succinate-CoA ligase (ADP-forming) activity
NQU91_12495	COG0508	dehydrogenase complex catalyzes the overall conversion of
NQU91_12500	COG0567	Dehydrogenase, E1 component
NQU91_12510	COG1053	succinate dehydrogenase
NQU91_12515	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
NQU91_12540	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
NQU91_12545	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NQU91_12545	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
NQU91_12555	COG3069	C4-dicarboxylate transmembrane transporter activity
NQU91_12570	COG1451	nucleotide metabolic process
NQU91_12585	COG0254	rRNA binding
NQU91_12590	COG0257	Belongs to the bacterial ribosomal protein bL36 family
NQU91_12600	COG0583	DNA-binding transcription factor activity
NQU91_12610	COG1172	Belongs to the binding-protein-dependent transport system permease family
NQU91_12620	COG1879	ABC-type sugar transport system periplasmic component
NQU91_12625	COG1069	ribulokinase activity
NQU91_12635	COG2160	L-arabinose isomerase activity
NQU91_12645	COG0469	pyruvate kinase activity
NQU91_12655	COG1263	PTS System
NQU91_12655	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NQU91_12660	COG1874	Beta-galactosidase
NQU91_12665	COG3867	Arabinogalactan endo-beta-1,4-galactanase
NQU91_12670	COG3833	ABC-type maltose transport systems, permease component
NQU91_12675	COG1175	transmembrane transport
NQU91_12680	COG2182	Extracellular solute-binding protein
NQU91_12705	COG4580	involved in the transport of maltose and maltodextrins
NQU91_12710	COG1609	Transcriptional regulator
NQU91_12715	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NQU91_12720	COG1085	galactose-1-phosphate uridylyltransferase
NQU91_12725	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
NQU91_12750	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
NQU91_12785	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
NQU91_12795	COG3039	Transposase
NQU91_12805	COG2925	Exonuclease
NQU91_12815	COG3345	alpha-galactosidase
NQU91_12820	COG1380	Effector of murein hydrolase LrgA
NQU91_12825	COG1346	cytolysis
NQU91_12830	COG0295	cytidine deaminase activity
NQU91_12835	COG1022	Amp-dependent synthetase and ligase
NQU91_12850	COG0861	Integral membrane protein TerC family
NQU91_12855	COG2885	chlorophyll binding
NQU91_12860	COG2199	diguanylate cyclase activity
NQU91_12880	COG2154	pterin-4-alpha-carbinolamine dehydratase
NQU91_12890	COG3768	UPF0283 membrane protein
NQU91_12895	COG3106	COG3106 Predicted ATPase
NQU91_12910	COG1842	Phage shock protein A
NQU91_12915	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
NQU91_12925	COG4168	peptide transport system, permease
NQU91_12930	COG4171	peptide transport system, permease
NQU91_12940	COG4172	Belongs to the ABC transporter superfamily
NQU91_12950	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
NQU91_12955	COG1286	toxin biosynthetic process
NQU91_12960	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
NQU91_12965	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
NQU91_12970	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
NQU91_12975	COG1674	ftsk spoiiie
NQU91_12975	COG0531	amino acid
NQU91_12985	COG0686	Belongs to the AlaDH PNT family
NQU91_12990	COG0492	ferredoxin-NADP+ reductase activity
NQU91_12995	COG3706	GGDEF domain
NQU91_13000	COG3134	Outer membrane lipoprotein
NQU91_13005	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
NQU91_13010	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
NQU91_13015	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
NQU91_13020	COG0542	response to heat
NQU91_13025	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
NQU91_13030	COG1278	Cold shock
NQU91_13035	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NQU91_13065	COG3266	domain, Protein
NQU91_13065	COG4193	domain, Protein
NQU91_13065	COG5632	N-Acetylmuramoyl-L-alanine amidase
NQU91_13100	COG3829	transcription factor binding
NQU91_13175	COG3501	Rhs element vgr protein
NQU91_13200	COG1435	thymidine kinase activity
NQU91_13205	COG1757	Na H antiporter
NQU91_13210	COG2916	Histone family protein nucleoid-structuring protein H-NS
NQU91_13215	COG2096	Adenosyltransferase
NQU91_13220	COG3530	Putative quorum-sensing-regulated virulence factor
NQU91_13225	COG0602	queuosine metabolic process
NQU91_13230	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
NQU91_13250	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
NQU91_13260	COG0776	regulation of translation
NQU91_13265	COG0539	negative regulation of cytoplasmic translation
NQU91_13270	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
NQU91_13275	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NQU91_13285	COG0583	DNA-binding transcription factor activity
NQU91_13305	COG0778	Nitroreductase
NQU91_13310	COG5001	Diguanylate cyclase
NQU91_13310	COG3300	MHYT domain
NQU91_13320	COG0583	DNA-binding transcription factor activity
NQU91_13325	COG3437	response regulator, receiver
NQU91_13350	COG4989	oxidoreductase activity
NQU91_13355	COG0724	RNA recognition motif
NQU91_13375	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
NQU91_13395	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
NQU91_13400	COG1360	Flagellar Motor Protein
NQU91_13405	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NQU91_13410	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NQU91_13415	COG0649	NAD binding
NQU91_13415	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NQU91_13430	COG1034	ATP synthesis coupled electron transport
NQU91_13435	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
NQU91_13445	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NQU91_13450	COG0839	Belongs to the complex I subunit 6 family
NQU91_13455	COG0713	ATP synthesis coupled electron transport
NQU91_13465	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NQU91_13470	COG1007	ATP synthesis coupled electron transport
NQU91_13485	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
NQU91_13485	COG2199	diguanylate cyclase activity
NQU91_13490	COG0047	phosphoribosylformylglycinamidine synthase activity
NQU91_13490	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NQU91_13495	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
NQU91_13500	COG1645	bacterial-type flagellum-dependent swarming motility
NQU91_13505	COG1160	GTP binding
NQU91_13510	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NQU91_13515	COG2976	Protein conserved in bacteria
NQU91_13520	COG0124	histidyl-tRNA synthetase
NQU91_13525	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
NQU91_13540	COG0820	rRNA (adenine-C2-)-methyltransferase activity
NQU91_13545	COG0105	UTP biosynthetic process
NQU91_13550	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
NQU91_13560	COG0633	Ferredoxin
NQU91_13565	COG0443	Heat shock 70 kDa protein
NQU91_13570	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
NQU91_13580	COG0822	iron-sulfur transferase activity
NQU91_13585	COG1104	cysteine desulfurase activity
NQU91_13605	COG3154	lipid carrier protein
NQU91_13610	COG0826	peptidase U32
NQU91_13615	COG0826	peptidase U32
NQU91_13625	COG2897	thiosulfate sulfurtransferase activity
NQU91_13630	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NQU91_13635	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NQU91_13640	COG1862	Preprotein translocase
NQU91_13645	COG0343	queuine tRNA-ribosyltransferase activity
NQU91_13650	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
NQU91_13655	COG0517	IMP dehydrogenase activity
NQU91_13665	COG3634	alkyl hydroperoxide reductase activity
NQU91_13685	COG1393	Belongs to the ArsC family
NQU91_13690	COG0798	PFAM Bile acid sodium symporter
NQU91_13720	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
NQU91_13720	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
NQU91_13725	COG0509	glycine decarboxylation via glycine cleavage system
NQU91_13730	COG0404	The glycine cleavage system catalyzes the degradation of glycine
NQU91_13735	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NQU91_13740	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NQU91_13760	COG2814	Major facilitator Superfamily
NQU91_13765	COG0625	glutathione transferase activity
NQU91_13775	COG0483	inositol monophosphate 1-phosphatase activity
NQU91_13800	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NQU91_13840	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
NQU91_13845	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
NQU91_13860	COG0301	tRNA thio-modification
NQU91_13860	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NQU91_13890	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
NQU91_13905	COG0328	RNA-DNA hybrid ribonuclease activity
NQU91_13935	COG4953	penicillin-binding protein 1C
NQU91_13940	COG2373	Large extracellular alpha-helical protein
NQU91_13945	COG0446	pyridine nucleotide-disulphide oxidoreductase
NQU91_13955	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NQU91_13980	COG3039	Transposase
NQU91_14020	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NQU91_14030	COG2431	L-lysine efflux transmembrane transporter activity
NQU91_14035	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
NQU91_14040	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
NQU91_14055	COG1393	Belongs to the ArsC family
NQU91_14065	COG4783	chaperone-mediated protein folding
NQU91_14070	COG0425	Belongs to the sulfur carrier protein TusA family
NQU91_14090	COG3842	ATPase activity
NQU91_14095	COG3833	ABC-type maltose transport systems, permease component
NQU91_14100	COG1175	transmembrane transport
NQU91_14110	COG3081	Nucleoid-associated protein
NQU91_14115	COG3082	Protein of unknown function (DUF1414)
NQU91_14120	COG3083	sulfuric ester hydrolase activity
NQU91_14125	COG4771	TonB-dependent receptor
NQU91_14130	COG1770	oligopeptidase
NQU91_14150	COG4574	serine-type endopeptidase inhibitor activity
NQU91_14155	COG3085	chromosome segregation
NQU91_14160	COG0583	DNA-binding transcription factor activity
NQU91_14165	COG0287	Prephenate dehydrogenase
NQU91_14165	COG1605	Chorismate mutase
NQU91_14170	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NQU91_14175	COG0584	glycerophosphoryl diester phosphodiesterase
NQU91_14185	COG1349	DNA-binding transcription factor activity
NQU91_14190	COG2271	Major facilitator Superfamily
NQU91_14195	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
NQU91_14200	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
NQU91_14235	COG0656	L-ascorbic acid biosynthetic process
NQU91_14240	COG2814	Major facilitator Superfamily
NQU91_14250	COG1294	oxidase, subunit
NQU91_14260	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NQU91_14270	COG2979	Protein of unknown function (DUF533)
NQU91_14300	COG2271	Major facilitator Superfamily
NQU91_14305	COG0583	DNA-binding transcription factor activity
NQU91_14315	COG2807	transmembrane transport
NQU91_14325	COG1187	pseudouridine synthase activity
NQU91_14340	COG0346	lactoylglutathione lyase activity
NQU91_14350	COG1403	HNH endonuclease
NQU91_14360	COG2964	Protein conserved in bacteria
NQU91_14365	COG3681	Belongs to the UPF0597 family
NQU91_14375	COG0814	amino acid
NQU91_14395	COG1166	arginine decarboxylase activity
NQU91_14405	COG2195	Cleaves the N-terminal amino acid of tripeptides
NQU91_14435	COG0583	DNA-binding transcription factor activity
NQU91_14445	COG2759	Belongs to the formate--tetrahydrofolate ligase family
NQU91_14450	COG0840	transmembrane signaling receptor activity
NQU91_14455	COG0302	gtp cyclohydrolase
NQU91_14465	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
NQU91_14470	COG2267	carboxylic ester hydrolase activity
NQU91_14475	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
NQU91_14490	COG0314	molybdopterin synthase activity
NQU91_14495	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
NQU91_14500	COG0315	cyclic pyranopterin monophosphate synthase activity
NQU91_14505	COG0521	Mo-molybdopterin cofactor biosynthetic process
NQU91_14510	COG3005	denitrification pathway
NQU91_14520	COG0348	domain, Protein
NQU91_14525	COG0437	4 iron, 4 sulfur cluster binding
NQU91_14530	COG0243	molybdopterin cofactor binding
NQU91_14540	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
NQU91_14540	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
NQU91_14545	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
NQU91_14550	COG3850	Histidine kinase
NQU91_14555	COG2197	response regulator
NQU91_14585	COG0121	glutamine amidotransferase
NQU91_14590	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
NQU91_14595	COG1960	acyl-CoA dehydrogenase activity
NQU91_14600	COG0784	Response regulator, receiver
NQU91_14600	COG3437	response regulator, receiver
NQU91_14615	COG0328	RNA-DNA hybrid ribonuclease activity
NQU91_14620	COG2226	methyltransferase
NQU91_14625	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NQU91_14630	COG0741	lytic transglycosylase activity
NQU91_14630	COG1388	LysM domain
NQU91_14635	COG3021	interspecies interaction between organisms
NQU91_14645	COG1607	acyl-coa hydrolase
NQU91_14660	COG0741	lytic transglycosylase activity
NQU91_14670	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
NQU91_14690	COG2911	Protein conserved in bacteria
NQU91_14695	COG0729	surface antigen
NQU91_14705	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NQU91_14720	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NQU91_14730	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NQU91_14740	COG4134	Bacterial extracellular solute-binding protein
NQU91_14750	COG4136	ATPase activity
NQU91_14755	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NQU91_14760	COG2951	lytic endotransglycosylase activity
NQU91_14775	COG1846	Transcriptional regulator
NQU91_14785	COG0033	Phosphoglucomutase
NQU91_14790	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
NQU91_14795	COG0596	Alpha beta hydrolase
NQU91_14810	COG0716	FMN binding
NQU91_14820	COG0735	belongs to the Fur family
NQU91_14825	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NQU91_14835	COG1263	PTS System
NQU91_14835	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NQU91_14835	COG2190	(PTS) system
NQU91_14840	COG0363	glucosamine-6-phosphate deaminase activity
NQU91_14845	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
NQU91_14850	COG1846	Transcriptional regulator
NQU91_14850	COG1940	carbohydrate kinase activity
NQU91_14855	COG2194	sulfuric ester hydrolase activity
NQU91_14860	COG0217	transcriptional regulatory protein
NQU91_14865	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
NQU91_14870	COG1801	Protein of unknown function DUF72
NQU91_14875	COG4106	trans-aconitate 2-methyltransferase activity
NQU91_14880	COG0500	methyltransferase
NQU91_14900	COG0450	alkyl hydroperoxide reductase
NQU91_14905	COG0583	DNA-binding transcription factor activity
NQU91_14915	COG0791	NLP P60 protein
NQU91_14930	COG1309	transcriptional regulator
NQU91_14970	COG0534	Mate efflux family protein
NQU91_14990	COG0674	pyruvate-flavodoxin oxidoreductase activity
NQU91_14990	COG1013	pyruvate-flavodoxin oxidoreductase activity
NQU91_14990	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
NQU91_14990	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
NQU91_15000	COG0633	Ferredoxin
NQU91_15000	COG3217	Mosc domain protein beta barrel domain protein
NQU91_15000	COG0633	Ferredoxin
NQU91_15000	COG3217	Mosc domain protein beta barrel domain protein
NQU91_15010	COG0501	Belongs to the peptidase M48B family
NQU91_15015	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
NQU91_15020	COG1073	alpha beta
NQU91_15020	COG2226	methyltransferase
NQU91_15025	COG0156	8-amino-7-oxononanoate synthase activity
NQU91_15030	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
NQU91_15050	COG0017	Asparaginyl-tRNA synthetase
NQU91_15055	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
NQU91_15070	COG3069	C4-dicarboxylate transmembrane transporter activity
NQU91_15080	COG0583	DNA-binding transcription factor activity
NQU91_15085	COG1393	Belongs to the ArsC family
NQU91_15090	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NQU91_15095	COG1876	peptidase activity
NQU91_15105	COG3263	regulation of cellular component size
NQU91_15115	COG3263	regulation of cellular component size
NQU91_15125	COG1280	lysine exporter protein (LysE YggA)
NQU91_15150	COG1957	nucleoside hydrolase
NQU91_15155	COG0564	pseudouridine synthase activity
NQU91_15165	COG1454	alcohol dehydrogenase
NQU91_15170	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NQU91_15175	COG0702	epimerase
NQU91_15180	COG2914	Belongs to the UPF0125 (RnfH) family
NQU91_15185	COG2867	negative regulation of translational initiation
NQU91_15190	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
NQU91_15200	COG0582	viral genome integration into host DNA
NQU91_15205	COG2916	Histone family protein nucleoid-structuring protein H-NS
NQU91_15215	COG4983	Phage plasmid primase, P4 family domain protein
NQU91_15245	COG5377	YqaJ viral recombinase family
NQU91_15300	COG2003	Belongs to the UPF0758 family
NQU91_15375	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
NQU91_15440	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NQU91_15445	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NQU91_15455	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NQU91_15465	COG2814	Major facilitator Superfamily
NQU91_15465	COG0477	Major facilitator Superfamily
NQU91_15470	COG0457	Tetratricopeptide repeat
NQU91_15475	COG1940	carbohydrate kinase activity
NQU91_15480	COG0583	DNA-binding transcription factor activity
NQU91_15485	COG3048	D-serine ammonia-lyase activity
NQU91_15500	COG0538	isocitrate dehydrogenase activity
NQU91_15505	COG2207	Transcriptional regulator
NQU91_15525	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NQU91_15540	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
NQU91_15545	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NQU91_15545	COG1263	PTS System
NQU91_15550	COG1609	Transcriptional regulator
NQU91_15560	COG0789	Transcriptional regulator
NQU91_15570	COG0456	acetyltransferase
NQU91_15580	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NQU91_15580	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU91_15580	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NQU91_15590	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NQU91_15600	COG1187	pseudouridine synthase activity
NQU91_15610	COG0482	sulfurtransferase activity
NQU91_15615	COG2915	High frequency lysogenization protein hflD homolog
NQU91_15620	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
NQU91_15625	COG2850	peptidyl-arginine hydroxylation
NQU91_15635	COG3153	acetyltransferase
NQU91_15645	COG0625	glutathione transferase activity
NQU91_15650	COG0259	pyridoxamine-phosphate oxidase activity
NQU91_15665	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NQU91_15665	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NQU91_15670	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
NQU91_15685	COG3088	subunit of a heme lyase
NQU91_15685	COG4235	cytochrome complex assembly
NQU91_15690	COG3088	subunit of a heme lyase
NQU91_15690	COG4235	cytochrome complex assembly
NQU91_15695	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NQU91_15700	COG1138	Cytochrome C-type biogenesis protein
NQU91_15705	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
NQU91_15710	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
NQU91_15715	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
NQU91_15720	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
NQU91_15735	COG0835	chemotaxis
NQU91_15745	COG1192	Involved in chromosome partitioning
NQU91_15750	COG1360	Flagellar Motor Protein
NQU91_15755	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
NQU91_15760	COG2201	protein-glutamate methylesterase activity
NQU91_15765	COG0643	Histidine kinase
NQU91_15765	COG0784	Response regulator, receiver
NQU91_15765	COG2198	Histidine kinase
NQU91_15770	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
NQU91_15795	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
NQU91_15805	COG1684	flagellar biosynthetic protein fliR
NQU91_15860	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
NQU91_15870	COG1677	Flagellar hook-basal body complex protein FliE
NQU91_15890	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
NQU91_15900	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
NQU91_15900	COG1073	alpha beta
NQU91_15900	COG3064	Membrane
NQU91_15905	COG2994	toxin metabolic process
NQU91_15915	COG2274	protein secretion by the type I secretion system
NQU91_15925	COG2274	protein secretion by the type I secretion system
NQU91_15945	COG1737	Transcriptional regulator
NQU91_15950	COG0469	pyruvate kinase activity
NQU91_15960	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NQU91_15965	COG1960	acyl-CoA dehydrogenase activity
NQU91_15975	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
NQU91_16020	COG0243	molybdopterin cofactor binding
NQU91_16025	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
NQU91_16030	COG0583	DNA-binding transcription factor activity
NQU91_16065	COG1012	belongs to the aldehyde dehydrogenase family
NQU91_16065	COG1454	alcohol dehydrogenase
NQU91_16075	COG1012	belongs to the aldehyde dehydrogenase family
NQU91_16075	COG1454	alcohol dehydrogenase
NQU91_16080	COG1882	Formate acetyltransferase
NQU91_16085	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NQU91_16095	COG4869	propanediol catabolic process
NQU91_16115	COG0582	viral genome integration into host DNA
NQU91_16130	COG3311	Transcriptional regulator
NQU91_16175	COG2003	Belongs to the UPF0758 family
NQU91_16210	COG1518	maintenance of DNA repeat elements
NQU91_16215	COG1203	CRISPR-associated helicase, Cas3
NQU91_16265	COG4959	Type IV secretory pathway protease TraF
NQU91_16280	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
NQU91_16300	COG0583	DNA-binding transcription factor activity
NQU91_16390	COG1376	ErfK ybiS ycfS ynhG family protein
NQU91_16390	COG1388	LysM domain
NQU91_16410	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
NQU91_16415	COG0791	NLP P60 protein
NQU91_16425	COG3118	belongs to the thioredoxin family
NQU91_16435	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NQU91_16440	COG0788	formyltetrahydrofolate deformylase activity
NQU91_16450	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NQU91_16470	COG0366	Alpha amylase catalytic
NQU91_16475	COG0741	lytic transglycosylase activity
NQU91_16475	COG1196	nuclear chromosome segregation
NQU91_16475	COG0739	heme binding
NQU91_16480	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
NQU91_16485	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
NQU91_16490	COG0673	inositol 2-dehydrogenase activity
NQU91_16525	COG1032	radical SAM domain protein
NQU91_16535	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NQU91_16540	COG1566	PFAM secretion protein HlyD family protein
NQU91_16550	COG1752	Esterase of the alpha-beta hydrolase superfamily
NQU91_16555	COG0733	neurotransmitter:sodium symporter activity
NQU91_16585	COG0281	malic enzyme
NQU91_16595	COG0534	Mate efflux family protein
NQU91_16610	COG2233	PERMEase
NQU91_16615	COG0095	Lipoate-protein ligase
NQU91_16620	COG1115	amino acid carrier protein
NQU91_16625	COG0019	diaminopimelate decarboxylase activity
NQU91_16645	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
NQU91_16665	COG1131	(ABC) transporter
NQU91_16670	COG0545	Peptidyl-prolyl cis-trans isomerase
NQU91_16675	COG3142	Participates in the control of copper homeostasis
NQU91_16700	COG5002	protein histidine kinase activity
NQU91_16705	COG0745	RESPONSE REGULATOR receiver
NQU91_16710	COG0346	lactoylglutathione lyase activity
NQU91_16715	COG1804	L-carnitine dehydratase bile acid-inducible protein F
NQU91_16720	COG1960	acyl-CoA dehydrogenase activity
NQU91_16725	COG3284	Transcriptional regulator
NQU91_16740	COG0697	spore germination
NQU91_16745	COG4565	transcriptional regulatory protein
NQU91_16750	COG3290	protein histidine kinase activity
NQU91_16770	COG1846	Transcriptional regulator
NQU91_16775	COG1566	PFAM secretion protein HlyD family protein
NQU91_16805	COG0602	queuosine metabolic process
NQU91_16810	COG1328	CTP reductase activity
NQU91_16820	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
NQU91_16825	COG3115	cell septum assembly
NQU91_16830	COG1196	nuclear chromosome segregation
NQU91_16840	COG2860	membrane
NQU91_16850	COG3108	Peptidase M15
NQU91_16855	COG2989	Protein conserved in bacteria
NQU91_16870	COG0463	Glycosyl transferase, family 2
NQU91_16885	COG0366	Alpha amylase catalytic
NQU91_16920	COG3706	GGDEF domain
NQU91_16930	COG3590	peptidase
NQU91_16940	COG0488	(ABC) transporter
NQU91_16950	COG0531	amino acid
NQU91_16960	COG1073	alpha beta
NQU91_16965	COG1073	alpha beta
NQU91_16980	COG0814	amino acid
NQU91_16995	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
NQU91_17000	COG1982	Orn Lys Arg decarboxylase major
NQU91_17005	COG0531	amino acid
NQU91_17010	COG3710	Transcriptional regulator
NQU91_17015	COG0825	malonyl-CoA metabolic process
NQU91_17025	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NQU91_17030	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NQU91_17035	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NQU91_17040	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
NQU91_17045	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NQU91_17060	COG0750	zinc metalloprotease
NQU91_17065	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
NQU91_17070	COG0575	Belongs to the CDS family
NQU91_17075	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NQU91_17080	COG0233	cytoplasmic translational termination
NQU91_17085	COG0528	UMP kinase activity
NQU91_17090	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
NQU91_17095	COG0052	Belongs to the universal ribosomal protein uS2 family
NQU91_17100	COG0024	Methionine aminopeptidase
NQU91_17105	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
NQU91_17110	COG2171	N-acyltransferase activity
NQU91_17120	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NQU91_17120	COG1263	PTS System
NQU91_17130	COG4580	involved in the transport of maltose and maltodextrins
NQU91_17140	COG0564	pseudouridine synthase activity
NQU91_17145	COG3098	single-species biofilm formation
NQU91_17170	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
NQU91_17180	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
NQU91_17180	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
NQU91_17195	COG1611	Belongs to the LOG family
NQU91_17200	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NQU91_17205	COG0473	3-isopropylmalate dehydrogenase activity
NQU91_17215	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
NQU91_17220	COG2363	Small membrane protein
NQU91_17230	COG0583	DNA-binding transcription factor activity
NQU91_17235	COG0840	transmembrane signaling receptor activity
NQU91_17240	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NQU91_17255	COG1477	protein flavinylation
NQU91_17260	COG2871	sodium ion transport
NQU91_17265	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
NQU91_17270	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
NQU91_17275	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
NQU91_17280	COG1805	sodium ion transport
NQU91_17285	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
NQU91_17290	COG0271	Belongs to the BolA IbaG family
NQU91_17295	COG2813	Specifically methylates the guanine in position
NQU91_17305	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NQU91_17315	COG2211	Major facilitator Superfamily
NQU91_17320	COG3248	Nucleoside-binding outer membrane protein
NQU91_17325	COG1666	GTP binding
NQU91_17330	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NQU91_17335	COG0693	protein deglycase activity
NQU91_17390	COG2771	luxR family
NQU91_17400	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NQU91_17400	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
NQU91_17405	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NQU91_17415	COG1151	hydroxylamine reductase activity
NQU91_17420	COG0783	Belongs to the Dps family
NQU91_17445	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
NQU91_17460	COG4221	oxidoreductase activity
NQU91_17470	COG0415	Belongs to the DNA photolyase family
NQU91_17475	COG0789	Transcriptional regulator
NQU91_17480	COG3272	Protein of unknown function (DUF1722)
NQU91_17510	COG0077	Prephenate dehydratase
NQU91_17510	COG1605	Chorismate mutase
NQU91_17535	COG3254	rhamnose metabolic process
NQU91_17545	COG4806	L-rhamnose isomerase
NQU91_17550	COG1070	Carbohydrate kinase
NQU91_17555	COG4977	sequence-specific DNA binding
NQU91_17560	COG1454	alcohol dehydrogenase
NQU91_17565	COG0235	Class ii aldolase
NQU91_17575	COG0840	transmembrane signaling receptor activity
NQU91_17585	COG0300	oxidoreductase activity
NQU91_17610	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
NQU91_17640	COG0826	peptidase U32
NQU91_17645	COG1280	lysine exporter protein (LysE YggA)
NQU91_17655	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NQU91_17660	COG0840	transmembrane signaling receptor activity
NQU91_17675	COG0643	Histidine kinase
NQU91_17675	COG2198	Histidine kinase
NQU91_17685	COG0835	chemotaxis
NQU91_17690	COG0840	transmembrane signaling receptor activity
NQU91_17700	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
NQU91_17705	COG2201	protein-glutamate methylesterase activity
NQU91_17710	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NQU91_17735	COG2199	diguanylate cyclase activity
NQU91_17735	COG2200	EAL domain
NQU91_17735	COG2203	Gaf domain
NQU91_17740	COG0826	peptidase U32
NQU91_17745	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
NQU91_17755	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NQU91_17760	COG0305	Participates in initiation and elongation during chromosome replication
NQU91_17770	COG2200	EAL domain
NQU91_17775	COG0737	Belongs to the 5'-nucleotidase family
NQU91_17795	COG2204	response regulator
NQU91_17800	COG0545	Peptidyl-prolyl cis-trans isomerase
NQU91_17815	COG1047	Peptidyl-prolyl cis-trans
NQU91_17820	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
NQU91_17830	COG0835	chemotaxis
NQU91_17830	COG0784	Response regulator, receiver
NQU91_17835	COG0429	hydrolase of the alpha beta-hydrolase fold
NQU91_17840	COG2203	Gaf domain
NQU91_17840	COG3706	GGDEF domain
NQU91_17840	COG4251	negative regulation of phosphorylation
NQU91_17840	COG5001	Diguanylate cyclase
NQU91_17845	COG3089	Belongs to the UPF0270 family
NQU91_17855	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
NQU91_17860	COG0463	Glycosyl transferase, family 2
NQU91_17865	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NQU91_17865	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NQU91_17870	COG0726	polysaccharide deacetylase
NQU91_17875	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NQU91_17880	COG2076	Multidrug Resistance protein
NQU91_17885	COG2076	Multidrug Resistance protein
NQU91_17890	COG3954	Phosphoribulokinase
NQU91_17905	COG1765	OsmC-like protein
NQU91_17915	COG2226	methyltransferase
NQU91_17920	COG3397	chitin binding
NQU91_17935	COG2205	protein histidine kinase activity
NQU91_17935	COG2202	Pas domain
NQU91_17945	COG3655	Transcriptional regulator
NQU91_17950	COG2814	Major facilitator Superfamily
NQU91_17955	COG4771	TonB-dependent receptor
NQU91_17975	COG0748	coenzyme F420 binding
NQU91_17980	COG3721	Heme iron utilization protein
NQU91_17990	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NQU91_18015	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
NQU91_18020	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NQU91_18025	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
NQU91_18045	COG0741	lytic transglycosylase activity
NQU91_18050	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NQU91_18065	COG0488	(ABC) transporter
NQU91_18075	COG2252	PERMEase
NQU91_18080	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
NQU91_18085	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
NQU91_18090	COG3178	'Phosphotransferase
NQU91_18095	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
NQU91_18105	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
NQU91_18110	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
NQU91_18115	COG2967	ApaG domain
NQU91_18120	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
NQU91_18130	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NQU91_18135	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
NQU91_18150	COG0318	PFAM AMP-dependent synthetase and ligase
NQU91_18160	COG3314	Sporulation integral membrane protein YlbJ
NQU91_18165	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
NQU91_18170	COG0211	Belongs to the bacterial ribosomal protein bL27 family
NQU91_18175	COG0261	This protein binds to 23S rRNA in the presence of protein L20
NQU91_18180	COG0142	geranyltranstransferase activity
NQU91_18185	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
NQU91_18190	COG0330	HflC and HflK could
NQU91_18195	COG0330	HflC and HflK could
NQU91_18200	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NQU91_18205	COG1923	regulation of RNA biosynthetic process
NQU91_18210	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
NQU91_18215	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NQU91_18225	COG0802	atpase or kinase
NQU91_18230	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
NQU91_18230	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
NQU91_18250	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NQU91_18255	COG2011	ABC-type metal ion transport system permease component
NQU91_18260	COG1464	Belongs to the NlpA lipoprotein family
NQU91_18275	COG0840	transmembrane signaling receptor activity
NQU91_18300	COG0784	Response regulator, receiver
NQU91_18300	COG2198	Histidine kinase
NQU91_18300	COG5002	protein histidine kinase activity
NQU91_18320	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
NQU91_18335	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
NQU91_18340	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
NQU91_18350	COG2716	regulation of RNA biosynthetic process
NQU91_18355	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
NQU91_18360	COG3013	Belongs to the UPF0304 family
NQU91_18370	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NQU91_18375	COG0280	phosphate acetyltransferase
NQU91_18375	COG0857	belongs to the CobB CobQ family
NQU91_18385	COG0028	Belongs to the TPP enzyme family
NQU91_18400	COG0671	phosphoesterase, PA-phosphatase related
NQU91_18410	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NQU91_18415	COG0473	3-isopropylmalate dehydrogenase activity
NQU91_18420	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NQU91_18425	COG0066	3-isopropylmalate dehydratase activity
NQU91_18440	COG4143	(ABC) transporter
NQU91_18445	COG1178	ABC-type Fe3 transport system permease component
NQU91_18450	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
NQU91_18455	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
NQU91_18465	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NQU91_18495	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
NQU91_18500	COG0564	pseudouridine synthase activity
NQU91_18510	COG5001	Diguanylate cyclase
NQU91_18510	COG3300	MHYT domain
NQU91_18520	COG0459	protein refolding
NQU91_18525	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
NQU91_18530	COG0534	Mate efflux family protein
NQU91_18535	COG3030	protein affecting phage T7 exclusion by the F plasmid
NQU91_18540	COG1027	Aspartate ammonia-lyase
NQU91_18545	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
NQU91_18555	COG0477	Major facilitator Superfamily
NQU91_18570	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NQU91_18575	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NQU91_18585	COG0673	inositol 2-dehydrogenase activity
NQU91_18595	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
NQU91_18600	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NQU91_18605	COG3036	rescue of stalled ribosome
NQU91_18610	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NQU91_18620	COG0138	bifunctional purine biosynthesis protein purh
NQU91_18625	COG0151	Belongs to the GarS family
NQU91_18650	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NQU91_18655	COG0358	DNA primase activity
NQU91_18660	COG1610	YqeY-like protein
NQU91_18665	COG0828	Belongs to the bacterial ribosomal protein bS21 family
NQU91_18670	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NQU91_18685	COG1238	metal cluster binding
NQU91_18690	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
NQU91_18695	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
NQU91_18700	COG0585	pseudouridine synthase activity
NQU91_18710	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
NQU91_18715	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
NQU91_18720	COG0148	phosphopyruvate hydratase activity
NQU91_18725	COG0504	CTP synthase activity
NQU91_18730	COG3956	TIGRFAM MazG family protein
NQU91_18735	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NQU91_18740	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NQU91_18750	COG4807	Protein conserved in bacteria
NQU91_18755	COG3023	N-Acetylmuramoyl-L-alanine amidase
NQU91_18760	COG1349	DNA-binding transcription factor activity
NQU91_18770	COG2222	sugar isomerase
NQU91_18775	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NQU91_18785	COG3716	PTS system mannose fructose sorbose family IID component
NQU91_18790	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU91_18795	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
NQU91_18810	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
NQU91_18815	COG1381	Involved in DNA repair and RecF pathway recombination
NQU91_18825	COG0571	ribonuclease III activity
NQU91_18830	COG0681	Belongs to the peptidase S26 family
NQU91_18835	COG0481	GTPase activity
NQU91_18850	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
NQU91_18855	COG1595	DNA-templated transcription, initiation
NQU91_18860	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
NQU91_18870	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
NQU91_18875	COG0354	folic acid binding
NQU91_18910	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NQU91_18920	COG0126	phosphoglycerate kinase activity
NQU91_18925	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
NQU91_18930	COG1940	carbohydrate kinase activity
NQU91_18935	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
NQU91_18950	COG4991	sh3 domain protein
NQU91_18955	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NQU91_18970	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
NQU91_18990	COG1505	serine-type exopeptidase activity
NQU91_18995	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
NQU91_19000	COG0765	amino acid transport
NQU91_19005	COG0765	amino acid transport
NQU91_19010	COG1126	abc transporter atp-binding protein
NQU91_19015	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NQU91_19020	COG1136	(ABC) transporter
NQU91_19020	COG0577	efflux transmembrane transporter activity
NQU91_19025	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NQU91_19030	COG0745	RESPONSE REGULATOR receiver
NQU91_19040	COG2816	NAD+ diphosphatase activity
NQU91_19075	COG2070	2-Nitropropane dioxygenase
NQU91_19105	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
NQU91_19125	COG0513	Belongs to the DEAD box helicase family
NQU91_19145	COG0154	amidase activity
NQU91_19150	COG2957	Belongs to the agmatine deiminase family
NQU91_19160	COG2852	Protein conserved in bacteria
NQU91_19170	COG1902	pentaerythritol trinitrate reductase activity
NQU91_19205	COG5001	Diguanylate cyclase
NQU91_19205	COG3300	MHYT domain
NQU91_19215	COG0714	Associated with various cellular activities
NQU91_19225	COG0456	acetyltransferase
NQU91_19235	COG1022	Amp-dependent synthetase and ligase
NQU91_19245	COG2918	glutathione biosynthetic process
NQU91_19250	COG0612	Peptidase, M16
NQU91_19255	COG1238	metal cluster binding
NQU91_19280	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NQU91_19285	COG0359	binds to the 23S rRNA
NQU91_19290	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
NQU91_19295	COG0360	Binds together with S18 to 16S ribosomal RNA
NQU91_19300	COG1914	H( )-stimulated, divalent metal cation uptake system
NQU91_19320	COG2153	protein acetylation
NQU91_19330	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NQU91_19335	COG0557	exoribonuclease II activity
NQU91_19340	COG3706	GGDEF domain
NQU91_19345	COG1854	S-ribosylhomocysteine lyase activity
NQU91_19360	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NQU91_19360	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
NQU91_19420	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
NQU91_19425	COG1047	Peptidyl-prolyl cis-trans
NQU91_19430	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
NQU91_19435	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NQU91_19440	COG0196	riboflavin kinase activity
NQU91_19450	COG0728	peptidoglycan biosynthetic process
NQU91_19455	COG0268	Binds directly to 16S ribosomal RNA
NQU91_19460	COG0640	Transcriptional regulator
NQU91_19465	COG0583	DNA-binding transcription factor activity
NQU91_19475	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
NQU91_19480	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
NQU91_19485	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
NQU91_19495	COG1051	belongs to the nudix hydrolase family
NQU91_19500	COG3066	DNA modification
NQU91_19510	COG0335	large ribosomal subunit rRNA binding
NQU91_19515	COG0336	Belongs to the RNA methyltransferase TrmD family
NQU91_19520	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NQU91_19525	COG0228	four-way junction DNA binding
NQU91_19530	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NQU91_19535	COG4137	Cytochrome C assembly protein
NQU91_19540	COG4536	flavin adenine dinucleotide binding
NQU91_19550	COG1017	nitric oxide dioxygenase activity
NQU91_19550	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NQU91_19555	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
NQU91_19560	COG0039	L-malate dehydrogenase activity
NQU91_19565	COG4160	amino acid transport
NQU91_19570	COG4215	(ABC) transporter
NQU91_19575	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NQU91_19580	COG1126	abc transporter atp-binding protein
NQU91_19585	COG1438	arginine binding
NQU91_19590	COG2837	iron assimilation
NQU91_19595	COG3842	ATPase activity
NQU91_19605	COG1840	ABC-type Fe3 transport system, periplasmic component
NQU91_19610	COG0347	Belongs to the P(II) protein family
NQU91_19625	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NQU91_19630	COG0583	DNA-binding transcription factor activity
NQU91_19645	COG1929	Belongs to the glycerate kinase type-1 family
NQU91_19650	COG2610	gluconate transmembrane transporter activity
NQU91_19655	COG3835	regulator
NQU91_19660	COG3112	Uncharacterised protein family (UPF0231)
NQU91_19675	COG0840	transmembrane signaling receptor activity
NQU91_19695	COG0513	Belongs to the DEAD box helicase family
NQU91_19735	COG1448	Aminotransferase
NQU91_19750	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NQU91_19755	COG1328	CTP reductase activity
NQU91_19775	COG0793	Belongs to the peptidase S41A family
NQU91_19775	COG4946	Tricorn protease homolog
NQU91_19805	COG0840	transmembrane signaling receptor activity
NQU91_19810	COG3397	chitin binding
NQU91_19815	COG0583	DNA-binding transcription factor activity
NQU91_19820	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
NQU91_19825	COG4208	sulfate ABC transporter
NQU91_19830	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
NQU91_19840	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
NQU91_19845	COG3174	membrane
NQU91_19850	COG0110	maltose O-acetyltransferase activity
NQU91_19875	COG0165	Argininosuccinate lyase
NQU91_19880	COG0137	argininosuccinate synthase activity
NQU91_19890	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
NQU91_19895	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
NQU91_19905	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
NQU91_19915	COG0460	homoserine dehydrogenase
NQU91_19915	COG0527	aspartate kinase activity
NQU91_19920	COG0626	cystathionine gamma-synthase activity
NQU91_19930	COG3708	Transcriptional regulator
NQU91_19930	COG2207	Transcriptional regulator
NQU91_19935	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NQU91_19940	COG0814	amino acid
NQU91_19945	COG1218	3'(2'),5'-bisphosphate nucleotidase
NQU91_19950	COG0494	nUDIX hydrolase
NQU91_19955	COG1011	Hydrolase
NQU91_19960	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NQU91_19975	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
NQU91_19985	COG3156	type II secretion system protein K
NQU91_19990	COG4795	General secretion pathway protein
NQU91_19995	COG2165	general secretion pathway protein
NQU91_20010	COG2165	general secretion pathway protein
NQU91_20015	COG1459	type II secretion system
NQU91_20020	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NQU91_20030	COG3031	protein transport across the cell outer membrane
NQU91_20040	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
NQU91_20045	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
NQU91_20065	COG0456	acetyltransferase
NQU91_20070	COG3133	Outer membrane lipoprotein
NQU91_20085	COG2771	luxR family
NQU91_20090	COG3916	Acyl-homoserine-lactone synthase
NQU91_20100	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
NQU91_20105	COG1309	transcriptional regulator
NQU91_20115	COG2213	PTS system mannitol-specific
NQU91_20115	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
NQU91_20120	COG0246	Mannitol dehydrogenase
NQU91_20125	COG3722	fumarate hydratase activity
NQU91_20130	COG3263	regulation of cellular component size
NQU91_20155	COG1671	Belongs to the UPF0178 family
NQU91_20170	COG1988	membrane-bound metal-dependent
NQU91_20175	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NQU91_20180	COG0513	Belongs to the DEAD box helicase family
NQU91_20205	COG1575	Belongs to the MenA family. Type 1 subfamily
NQU91_20210	COG1169	isochorismate synthase
NQU91_20215	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
NQU91_20220	COG0596	Alpha beta hydrolase
NQU91_20225	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
NQU91_20230	COG1441	menaquinone biosynthetic process
NQU91_20235	COG0318	PFAM AMP-dependent synthetase and ligase
NQU91_20255	COG3539	Fimbrial protein
NQU91_20260	COG3121	Chaperone
NQU91_20265	COG3188	usher protein
NQU91_20275	COG3539	Fimbrial protein
NQU91_20285	COG3291	Pkd domain containing protein
NQU91_20290	COG2949	membrane
NQU91_20295	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
NQU91_20305	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
NQU91_20310	COG5380	lipid catabolic process
NQU91_20335	COG2873	o-acetylhomoserine
NQU91_20345	COG1979	alcohol dehydrogenase
NQU91_20365	COG4221	oxidoreductase activity
NQU91_20385	COG1285	pathogenesis
NQU91_20405	COG1368	sulfuric ester hydrolase activity
NQU91_20410	COG1522	sequence-specific DNA binding