locus-tag	class	description
AHGSH82_000010	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AHGSH82_000020	COG0592	DNA-directed DNA polymerase activity
AHGSH82_000040	COG0187	DNA topoisomerase II activity
AHGSH82_000060	COG2378	regulation of single-species biofilm formation
AHGSH82_000070	COG0071	Belongs to the small heat shock protein (HSP20) family
AHGSH82_000080	COG0071	Belongs to the small heat shock protein (HSP20) family
AHGSH82_000090	COG3977	Valine--pyruvate aminotransferase
AHGSH82_000120	COG2814	Major facilitator Superfamily
AHGSH82_000130	COG0745	RESPONSE REGULATOR receiver
AHGSH82_000140	COG2205	protein histidine kinase activity
AHGSH82_000180	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AHGSH82_000190	COG4191	Histidine kinase
AHGSH82_000190	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHGSH82_000200	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AHGSH82_000210	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHGSH82_000250	COG0469	pyruvate kinase activity
AHGSH82_000260	COG2271	Major facilitator Superfamily
AHGSH82_000270	COG1840	ABC-type Fe3 transport system, periplasmic component
AHGSH82_000310	COG0561	phosphatase activity
AHGSH82_000320	COG2267	carboxylic ester hydrolase activity
AHGSH82_000330	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AHGSH82_000340	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AHGSH82_000350	COG1758	RNA polymerase activity
AHGSH82_000370	COG0859	PFAM glycosyl transferase family 9
AHGSH82_000380	COG3642	lipopolysaccharide core region biosynthetic process
AHGSH82_000460	COG0589	response to stress
AHGSH82_000470	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AHGSH82_000480	COG3706	GGDEF domain
AHGSH82_000490	COG1528	Iron-storage protein
AHGSH82_000500	COG2081	HI0933 family
AHGSH82_000520	COG2223	nitrite transmembrane transporter activity
AHGSH82_000540	COG3275	phosphorelay sensor kinase activity
AHGSH82_000560	COG3279	Response regulator of the LytR AlgR family
AHGSH82_000570	COG2223	nitrite transmembrane transporter activity
AHGSH82_000580	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AHGSH82_000590	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AHGSH82_000620	COG0583	DNA-binding transcription factor activity
AHGSH82_000630	COG4206	TonB-dependent receptor
AHGSH82_000640	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AHGSH82_000670	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AHGSH82_000680	COG2166	iron-sulfur cluster assembly
AHGSH82_000690	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AHGSH82_000700	COG0210	DNA helicase
AHGSH82_000720	COG3245	cytochrome
AHGSH82_000730	COG1063	alcohol dehydrogenase
AHGSH82_000740	COG0156	8-amino-7-oxononanoate synthase activity
AHGSH82_000760	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AHGSH82_000790	COG3306	glycosyltransferase involved in LPS biosynthesis
AHGSH82_000830	COG1561	YicC-like family, N-terminal region
AHGSH82_000840	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
AHGSH82_000850	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AHGSH82_000870	COG0789	Transcriptional regulator
AHGSH82_000880	COG3706	GGDEF domain
AHGSH82_000880	COG2203	Gaf domain
AHGSH82_000880	COG5001	Diguanylate cyclase
AHGSH82_000880	COG4251	negative regulation of phosphorylation
AHGSH82_000890	COG3084	Protein conserved in bacteria
AHGSH82_000910	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AHGSH82_000920	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AHGSH82_000940	COG1335	isochorismatase
AHGSH82_000960	COG1683	Conserved Protein
AHGSH82_000970	COG0204	Acyl-transferase
AHGSH82_000980	COG0204	Acyl-transferase
AHGSH82_000990	COG0606	chelatase, subunit chli
AHGSH82_001090	COG0606	chelatase, subunit chli
AHGSH82_001110	COG3978	acetolactate synthase activity
AHGSH82_001120	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AHGSH82_001130	COG0129	dihydroxy-acid dehydratase activity
AHGSH82_001190	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AHGSH82_001200	COG0254	rRNA binding
AHGSH82_001210	COG0702	epimerase
AHGSH82_001220	COG0281	malic enzyme
AHGSH82_001240	COG2205	protein histidine kinase activity
AHGSH82_001250	COG0745	RESPONSE REGULATOR receiver
AHGSH82_001260	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AHGSH82_001290	COG0366	Alpha amylase catalytic
AHGSH82_001320	COG0443	Heat shock 70 kDa protein
AHGSH82_001330	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AHGSH82_001340	COG3045	CreA protein
AHGSH82_001370	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AHGSH82_001380	COG0174	glutamine synthetase
AHGSH82_001420	COG3842	ATPase activity
AHGSH82_001430	COG1176	ABC-type spermidine putrescine transport system, permease component I
AHGSH82_001440	COG1177	transmembrane transport
AHGSH82_001450	COG2258	MOSC domain
AHGSH82_001470	COG2050	protein possibly involved in aromatic compounds catabolism
AHGSH82_001480	COG0514	ATP-dependent DNA helicase (RecQ)
AHGSH82_001500	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
AHGSH82_001520	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
AHGSH82_001530	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AHGSH82_001550	COG2239	Acts as a magnesium transporter
AHGSH82_001560	COG1648	precorrin-2 dehydrogenase activity
AHGSH82_001560	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AHGSH82_001570	COG2116	formate transmembrane transporter activity
AHGSH82_001580	COG2146	nitrite reductase [NAD(P)H] activity
AHGSH82_001590	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AHGSH82_001610	COG0477	Major facilitator Superfamily
AHGSH82_001620	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
AHGSH82_001630	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AHGSH82_001670	COG1595	DNA-templated transcription, initiation
AHGSH82_001680	COG3806	Anti-sigma factor
AHGSH82_001700	COG1968	undecaprenyl-diphosphatase activity
AHGSH82_001710	COG0667	Aldo Keto reductase
AHGSH82_001720	COG2017	converts alpha-aldose to the beta-anomer
AHGSH82_001730	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AHGSH82_001760	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AHGSH82_001770	COG1609	Transcriptional regulator
AHGSH82_001780	COG3250	beta-galactosidase activity
AHGSH82_001880	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AHGSH82_001890	COG1288	antiporter activity
AHGSH82_001900	COG1438	arginine binding
AHGSH82_001910	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
AHGSH82_001920	COG0540	Belongs to the ATCase OTCase family
AHGSH82_001950	COG0688	phosphatidylethanolamine metabolic process
AHGSH82_001970	COG3040	lipid binding
AHGSH82_001980	COG2207	Transcriptional regulator
AHGSH82_001990	COG1979	alcohol dehydrogenase
AHGSH82_002000	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AHGSH82_002010	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AHGSH82_002030	COG3681	Belongs to the UPF0597 family
AHGSH82_002050	COG0446	pyridine nucleotide-disulphide oxidoreductase
AHGSH82_002060	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AHGSH82_002070	COG0564	pseudouridine synthase activity
AHGSH82_002090	COG0542	response to heat
AHGSH82_002100	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AHGSH82_002110	COG2502	aspartate--ammonia ligase
AHGSH82_002120	COG1522	sequence-specific DNA binding
AHGSH82_002140	COG5413	integral membrane protein
AHGSH82_002190	COG2205	protein histidine kinase activity
AHGSH82_002210	COG2204	response regulator
AHGSH82_002250	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
AHGSH82_002280	COG0745	RESPONSE REGULATOR receiver
AHGSH82_002290	COG2205	protein histidine kinase activity
AHGSH82_002310	COG0243	molybdopterin cofactor binding
AHGSH82_002320	COG3005	denitrification pathway
AHGSH82_002330	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AHGSH82_002370	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AHGSH82_002380	COG0569	domain protein
AHGSH82_002390	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AHGSH82_002420	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AHGSH82_002430	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AHGSH82_002440	COG0250	Participates in transcription elongation, termination and antitermination
AHGSH82_002450	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AHGSH82_002460	COG0081	regulation of translation
AHGSH82_002470	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AHGSH82_002480	COG0222	ribosome binding
AHGSH82_002490	COG0085	RNA polymerase activity
AHGSH82_002500	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AHGSH82_002510	COG2964	Protein conserved in bacteria
AHGSH82_002520	COG0251	oxidation-reduction process
AHGSH82_002540	COG2923	Belongs to the DsrF TusC family
AHGSH82_002550	COG2168	tRNA wobble position uridine thiolation
AHGSH82_002560	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AHGSH82_002570	COG0049	tRNA binding
AHGSH82_002580	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AHGSH82_002590	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AHGSH82_002600	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AHGSH82_002620	COG2252	PERMEase
AHGSH82_002630	COG2376	Dihydroxyacetone kinase
AHGSH82_002640	COG1461	Dihydroxyacetone kinase
AHGSH82_002670	COG3284	Transcriptional regulator
AHGSH82_002690	COG2957	Belongs to the agmatine deiminase family
AHGSH82_002700	COG4221	oxidoreductase activity
AHGSH82_002710	COG0628	permease
AHGSH82_002720	COG0494	nUDIX hydrolase
AHGSH82_002770	COG0753	catalase activity
AHGSH82_002780	COG1247	-acetyltransferase
AHGSH82_002820	COG3706	GGDEF domain
AHGSH82_002840	COG3842	ATPase activity
AHGSH82_002860	COG1176	ABC-type spermidine putrescine transport system, permease component I
AHGSH82_002910	COG0583	DNA-binding transcription factor activity
AHGSH82_002930	COG1741	Belongs to the pirin family
AHGSH82_002940	COG2259	Doxx family
AHGSH82_002950	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
AHGSH82_002960	COG1074	ATP-dependent DNA helicase activity
AHGSH82_002970	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AHGSH82_002990	COG0346	lactoylglutathione lyase activity
AHGSH82_003050	COG0745	RESPONSE REGULATOR receiver
AHGSH82_003070	COG5001	Diguanylate cyclase
AHGSH82_003070	COG3706	GGDEF domain
AHGSH82_003070	COG2203	Gaf domain
AHGSH82_003070	COG4251	negative regulation of phosphorylation
AHGSH82_003080	COG4771	TonB-dependent receptor
AHGSH82_003090	COG1278	Cold shock
AHGSH82_003120	COG5433	transposase activity
AHGSH82_003150	COG1404	Belongs to the peptidase S8 family
AHGSH82_003160	COG0464	growth
AHGSH82_003190	COG2132	Multicopper oxidase
AHGSH82_003240	COG2217	Heavy metal translocating P-type atpase
AHGSH82_003250	COG5002	protein histidine kinase activity
AHGSH82_003260	COG0745	RESPONSE REGULATOR receiver
AHGSH82_003280	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHGSH82_003290	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AHGSH82_003300	COG1538	Outer membrane efflux protein
AHGSH82_003380	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AHGSH82_003430	COG4974	Belongs to the 'phage' integrase family
AHGSH82_003440	COG0629	single-stranded DNA binding
AHGSH82_003460	COG2197	response regulator
AHGSH82_003470	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AHGSH82_003480	COG3706	GGDEF domain
AHGSH82_003500	COG3047	cAMP biosynthetic process
AHGSH82_003510	COG0840	transmembrane signaling receptor activity
AHGSH82_003560	COG3135	benzoate transporter
AHGSH82_003570	COG1396	sequence-specific DNA binding
AHGSH82_003600	COG2926	Belongs to the UPF0265 family
AHGSH82_003620	COG3028	Belongs to the UPF0307 family
AHGSH82_003630	COG0312	modulator of DNA gyrase
AHGSH82_003640	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AHGSH82_003650	COG5007	Belongs to the BolA IbaG family
AHGSH82_003670	COG2854	intermembrane phospholipid transfer
AHGSH82_003680	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AHGSH82_003690	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AHGSH82_003700	COG1127	ABC transporter
AHGSH82_003710	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AHGSH82_003710	COG0517	IMP dehydrogenase activity
AHGSH82_003720	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
AHGSH82_003730	COG3117	lipopolysaccharide transmembrane transporter activity
AHGSH82_003740	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
AHGSH82_003750	COG1137	ATPase activity
AHGSH82_003760	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
AHGSH82_003780	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHGSH82_003790	COG1660	Displays ATPase and GTPase activities
AHGSH82_003800	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHGSH82_003810	COG3711	transcriptional antiterminator
AHGSH82_003810	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHGSH82_003840	COG3964	amidohydrolase
AHGSH82_003900	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AHGSH82_003910	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AHGSH82_003930	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AHGSH82_003940	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AHGSH82_003950	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AHGSH82_003960	COG0723	plastoquinol--plastocyanin reductase activity
AHGSH82_003970	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AHGSH82_003980	COG2857	Cytochrome c1
AHGSH82_003990	COG0625	glutathione transferase activity
AHGSH82_004000	COG2969	positive regulation of protein catabolic process
AHGSH82_004010	COG2823	Periplasmic or secreted lipoprotein
AHGSH82_004020	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
AHGSH82_004030	COG0792	nuclease activity
AHGSH82_004040	COG3107	peptidoglycan biosynthetic process
AHGSH82_004050	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AHGSH82_004060	COG2001	Belongs to the MraZ family
AHGSH82_004070	COG0275	rRNA processing
AHGSH82_004080	COG3116	cell division
AHGSH82_004090	COG0768	penicillin binding
AHGSH82_004110	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AHGSH82_004120	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AHGSH82_004130	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AHGSH82_004140	COG0772	Belongs to the SEDS family
AHGSH82_004150	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AHGSH82_004160	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AHGSH82_004170	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AHGSH82_004180	COG0849	cell division
AHGSH82_004190	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AHGSH82_004200	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
AHGSH82_004220	COG0653	protein targeting
AHGSH82_004240	COG0494	nUDIX hydrolase
AHGSH82_004250	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
AHGSH82_004260	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
AHGSH82_004290	COG1459	type II secretion system
AHGSH82_004300	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AHGSH82_004310	COG5433	transposase activity
AHGSH82_004350	COG2186	Transcriptional regulator
AHGSH82_004360	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
AHGSH82_004370	COG0508	dehydrogenase complex catalyzes the overall conversion of
AHGSH82_004380	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AHGSH82_004400	COG0840	transmembrane signaling receptor activity
AHGSH82_004410	COG0840	transmembrane signaling receptor activity
AHGSH82_004420	COG1752	Esterase of the alpha-beta hydrolase superfamily
AHGSH82_004430	COG1049	propionate catabolic process, 2-methylcitrate cycle
AHGSH82_004440	COG2200	EAL domain
AHGSH82_004460	COG1280	lysine exporter protein (LysE YggA)
AHGSH82_004480	COG0523	cobalamin synthesis protein
AHGSH82_004490	COG0477	Major facilitator Superfamily
AHGSH82_004520	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AHGSH82_004530	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
AHGSH82_004580	COG0835	chemotaxis
AHGSH82_004580	COG0784	Response regulator, receiver
AHGSH82_004590	COG1028	Short-chain dehydrogenase reductase Sdr
AHGSH82_004600	COG1444	tRNA N-acetyltransferase activity
AHGSH82_004650	COG1803	Methylglyoxal synthase
AHGSH82_004680	COG0252	asparaginase activity
AHGSH82_004720	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHGSH82_004720	COG1263	PTS System
AHGSH82_004730	COG0366	Alpha amylase catalytic
AHGSH82_004740	COG0110	maltose O-acetyltransferase activity
AHGSH82_004750	COG1522	sequence-specific DNA binding
AHGSH82_004760	COG5006	permease, DMT superfamily
AHGSH82_004780	COG1012	belongs to the aldehyde dehydrogenase family
AHGSH82_004790	COG1177	transmembrane transport
AHGSH82_004810	COG1176	ABC-type spermidine putrescine transport system, permease component I
AHGSH82_004820	COG3842	ATPase activity
AHGSH82_004830	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AHGSH82_004840	COG0583	DNA-binding transcription factor activity
AHGSH82_004850	COG1757	Na H antiporter
AHGSH82_004880	COG0297	glycogen (starch) synthase activity
AHGSH82_004890	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AHGSH82_004900	COG2813	Specifically methylates the guanine in position
AHGSH82_004910	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AHGSH82_004920	COG2203	Gaf domain
AHGSH82_004920	COG3706	GGDEF domain
AHGSH82_004920	COG4251	negative regulation of phosphorylation
AHGSH82_004920	COG5001	Diguanylate cyclase
AHGSH82_004940	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AHGSH82_004960	COG2995	paraquat-inducible protein a
AHGSH82_004970	COG3008	intermembrane lipid transfer
AHGSH82_004970	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AHGSH82_004980	COG3009	Protein conserved in bacteria
AHGSH82_004990	COG2885	chlorophyll binding
AHGSH82_004990	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AHGSH82_005010	COG3240	lipase activity
AHGSH82_005020	COG3111	PFAM Bacterial OB fold (BOF) protein
AHGSH82_005040	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
AHGSH82_005050	COG1194	a g-specific adenine glycosylase
AHGSH82_005070	COG3409	Peptidoglycan-binding domain 1 protein
AHGSH82_005070	COG3267	Type II secretory pathway component ExeA
AHGSH82_005080	COG0617	tRNA 3'-terminal CCA addition
AHGSH82_005110	COG1346	cytolysis
AHGSH82_005120	COG1380	Effector of murein hydrolase LrgA
AHGSH82_005130	COG0583	DNA-binding transcription factor activity
AHGSH82_005200	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AHGSH82_005210	COG0306	phosphate transporter
AHGSH82_005220	COG1392	Phosphate transport regulator
AHGSH82_005250	COG1560	Kdo2-lipid A biosynthetic process
AHGSH82_005260	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AHGSH82_005260	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
AHGSH82_005270	COG1538	Outer membrane efflux protein
AHGSH82_005280	COG0494	nUDIX hydrolase
AHGSH82_005290	COG3151	Protein conserved in bacteria
AHGSH82_005310	COG3150	esterase
AHGSH82_005320	COG1051	belongs to the nudix hydrolase family
AHGSH82_005350	COG1566	PFAM secretion protein HlyD family protein
AHGSH82_005360	COG1289	transmembrane transporter activity
AHGSH82_005370	COG0187	DNA topoisomerase II activity
AHGSH82_005400	COG0583	DNA-binding transcription factor activity
AHGSH82_005480	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AHGSH82_005520	COG0204	Acyl-transferase
AHGSH82_005540	COG1842	Phage shock protein A
AHGSH82_005570	COG2827	Endonuclease containing a URI domain
AHGSH82_005590	COG2962	Rard protein
AHGSH82_005600	COG1573	uracil-dna glycosylase
AHGSH82_005610	COG0697	spore germination
AHGSH82_005620	COG0583	DNA-binding transcription factor activity
AHGSH82_005630	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AHGSH82_005640	COG1121	(ABC) transporter
AHGSH82_005650	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
AHGSH82_005690	COG0739	heme binding
AHGSH82_005710	COG3068	Protein conserved in bacteria
AHGSH82_005750	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AHGSH82_005760	COG0582	viral genome integration into host DNA
AHGSH82_005870	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AHGSH82_005930	COG2003	Belongs to the UPF0758 family
AHGSH82_006020	COG5377	YqaJ viral recombinase family
AHGSH82_006040	COG1546	Belongs to the CinA family
AHGSH82_006050	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AHGSH82_006070	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AHGSH82_006080	COG0527	aspartate kinase activity
AHGSH82_006090	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
AHGSH82_006100	COG1686	Belongs to the peptidase S11 family
AHGSH82_006110	COG0586	Pfam SNARE associated Golgi protein
AHGSH82_006120	COG1253	flavin adenine dinucleotide binding
AHGSH82_006130	COG0525	valine-tRNA ligase activity
AHGSH82_006140	COG2927	DNA polymerase III (CHI subunit)
AHGSH82_006150	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AHGSH82_006160	COG0795	lipopolysaccharide-transporting ATPase activity
AHGSH82_006180	COG0795	lipopolysaccharide-transporting ATPase activity
AHGSH82_006200	COG0004	ammonium transporteR
AHGSH82_006210	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AHGSH82_006240	COG0084	hydrolase, TatD family'
AHGSH82_006250	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AHGSH82_006270	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AHGSH82_006280	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
AHGSH82_006290	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AHGSH82_006300	COG0813	purine-nucleoside phosphorylase activity
AHGSH82_006310	COG5001	Diguanylate cyclase
AHGSH82_006310	COG3447	MASE1 domain protein
AHGSH82_006310	COG5002	protein histidine kinase activity
AHGSH82_006330	COG0560	Phosphoserine phosphatase
AHGSH82_006380	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
AHGSH82_006390	COG0776	regulation of translation
AHGSH82_006420	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AHGSH82_006480	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
AHGSH82_006490	COG0513	Belongs to the DEAD box helicase family
AHGSH82_006500	COG3022	response to hydroperoxide
AHGSH82_006530	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AHGSH82_006540	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AHGSH82_006550	COG0762	integral membrane protein
AHGSH82_006560	COG1872	DUF167
AHGSH82_006590	COG4166	transmembrane transport
AHGSH82_006630	COG1024	Enoyl-CoA hydratase
AHGSH82_006660	COG4221	oxidoreductase activity
AHGSH82_006670	COG0442	prolyl-tRNA aminoacylation
AHGSH82_006680	COG0840	transmembrane signaling receptor activity
AHGSH82_006690	COG0632	four-way junction helicase activity
AHGSH82_006700	COG2255	four-way junction helicase activity
AHGSH82_006710	COG1271	oxidase subunit
AHGSH82_006720	COG1294	oxidase, subunit
AHGSH82_006730	COG4890	Cyd operon protein YbgT
AHGSH82_006740	COG3790	cyd operon protein YbgE
AHGSH82_006750	COG0824	Thioesterase
AHGSH82_006760	COG0811	peptide transport
AHGSH82_006790	COG0823	Involved in the tonB-independent uptake of proteins
AHGSH82_006800	COG2885	chlorophyll binding
AHGSH82_006810	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
AHGSH82_006820	COG0840	transmembrane signaling receptor activity
AHGSH82_006830	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AHGSH82_006840	COG0676	glucose-6-phosphate 1-epimerase activity
AHGSH82_006850	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AHGSH82_006860	COG1640	4-alpha-glucanotransferase
AHGSH82_006870	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AHGSH82_006910	COG1051	belongs to the nudix hydrolase family
AHGSH82_006920	COG2130	NADP-dependent
AHGSH82_006930	COG1764	response to oxidative stress
AHGSH82_006940	COG1846	Transcriptional regulator
AHGSH82_006970	COG1522	sequence-specific DNA binding
AHGSH82_007010	COG0561	phosphatase activity
AHGSH82_007040	COG0733	neurotransmitter:sodium symporter activity
AHGSH82_007060	COG0733	neurotransmitter:sodium symporter activity
AHGSH82_007110	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AHGSH82_007140	COG1794	racemase activity, acting on amino acids and derivatives
AHGSH82_007170	COG2731	YhcH YjgK YiaL family protein
AHGSH82_007190	COG0668	transmembrane transport
AHGSH82_007210	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AHGSH82_007260	COG0583	DNA-binding transcription factor activity
AHGSH82_007270	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
AHGSH82_007290	COG0488	(ABC) transporter
AHGSH82_007310	COG1585	Membrane protein implicated in regulation of membrane protease activity
AHGSH82_007320	COG0330	HflC and HflK could
AHGSH82_007330	COG1648	precorrin-2 dehydrogenase activity
AHGSH82_007330	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AHGSH82_007340	COG0175	sulfate reduction
AHGSH82_007350	COG2895	sulfate adenylyltransferase (ATP) activity
AHGSH82_007360	COG0471	metal ion transport
AHGSH82_007360	COG3273	potassium ion transport
AHGSH82_007370	COG0529	Catalyzes the synthesis of activated sulfate
AHGSH82_007400	COG0840	transmembrane signaling receptor activity
AHGSH82_007470	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
AHGSH82_007500	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AHGSH82_007510	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AHGSH82_007520	COG0163	prenyltransferase activity
AHGSH82_007550	COG1131	(ABC) transporter
AHGSH82_007560	COG0842	Transport permease protein
AHGSH82_007570	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
AHGSH82_007580	COG1924	4 iron, 4 sulfur cluster binding
AHGSH82_007620	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
AHGSH82_007630	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
AHGSH82_007660	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AHGSH82_007670	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AHGSH82_007680	COG1489	DNA binding
AHGSH82_007690	COG1643	Atp-dependent helicase
AHGSH82_007700	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AHGSH82_007710	COG0346	lactoylglutathione lyase activity
AHGSH82_007730	COG2076	Multidrug Resistance protein
AHGSH82_007750	COG0784	Response regulator, receiver
AHGSH82_007750	COG3437	response regulator, receiver
AHGSH82_007770	COG0671	phosphoesterase, PA-phosphatase related
AHGSH82_007800	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AHGSH82_007810	COG0038	chloride channel
AHGSH82_007830	COG0316	Belongs to the HesB IscA family
AHGSH82_007850	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
AHGSH82_007880	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHGSH82_007940	COG0745	RESPONSE REGULATOR receiver
AHGSH82_007950	COG3104	oligopeptide transport
AHGSH82_007960	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AHGSH82_007970	COG1555	photosystem II stabilization
AHGSH82_007990	COG2350	Protein conserved in bacteria
AHGSH82_008000	COG2917	probably involved in intracellular septation
AHGSH82_008010	COG0076	glutamate decarboxylase activity
AHGSH82_008020	COG1272	protein, Hemolysin III
AHGSH82_008030	COG2985	domain, Protein
AHGSH82_008030	COG0569	domain protein
AHGSH82_008170	COG0835	chemotaxis
AHGSH82_008170	COG0784	Response regulator, receiver
AHGSH82_008180	COG2755	lipolytic protein G-D-S-L family
AHGSH82_008190	COG4181	ATPase activity
AHGSH82_008210	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
AHGSH82_008220	COG1090	epimerase
AHGSH82_008230	COG2200	EAL domain
AHGSH82_008240	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AHGSH82_008250	COG4935	Belongs to the peptidase S8 family
AHGSH82_008250	COG2234	aminopeptidase activity
AHGSH82_008260	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AHGSH82_008270	COG3171	Protein conserved in bacteria
AHGSH82_008280	COG2066	Belongs to the glutaminase family
AHGSH82_008290	COG2897	thiosulfate sulfurtransferase activity
AHGSH82_008300	COG1404	Belongs to the peptidase S8 family
AHGSH82_008320	COG1132	(ABC) transporter
AHGSH82_008350	COG4412	M6 family metalloprotease domain protein
AHGSH82_008350	COG3291	Pkd domain containing protein
AHGSH82_008360	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
AHGSH82_008370	COG3300	MHYT domain
AHGSH82_008370	COG5001	Diguanylate cyclase
AHGSH82_008390	COG2207	Transcriptional regulator
AHGSH82_008400	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AHGSH82_008410	COG3059	membrane
AHGSH82_008440	COG4628	conserved protein (DUF2132)
AHGSH82_008450	COG0688	phosphatidylethanolamine metabolic process
AHGSH82_008460	COG1162	GTPase activity
AHGSH82_008470	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
AHGSH82_008480	COG1278	Cold shock
AHGSH82_008500	COG0840	transmembrane signaling receptor activity
AHGSH82_008510	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AHGSH82_008560	COG0848	biopolymer transport protein
AHGSH82_008570	COG0811	peptide transport
AHGSH82_008580	COG0811	peptide transport
AHGSH82_008610	COG4174	ABC transporter (Permease)
AHGSH82_008620	COG4239	(ABC) transporter, permease
AHGSH82_008640	COG0444	Belongs to the ABC transporter superfamily
AHGSH82_008650	COG4608	Belongs to the ABC transporter superfamily
AHGSH82_008670	COG2195	Cleaves the N-terminal amino acid of tripeptides
AHGSH82_008690	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
AHGSH82_008730	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AHGSH82_008780	COG0243	molybdopterin cofactor binding
AHGSH82_008810	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AHGSH82_008820	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AHGSH82_008830	COG1116	anion transmembrane transporter activity
AHGSH82_008840	COG2146	nitrite reductase [NAD(P)H] activity
AHGSH82_008840	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AHGSH82_008850	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AHGSH82_008850	COG2146	nitrite reductase [NAD(P)H] activity
AHGSH82_008860	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AHGSH82_008870	COG2313	pseudouridylate synthase activity
AHGSH82_008890	COG1858	cytochrome C peroxidase
AHGSH82_008960	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AHGSH82_008970	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AHGSH82_009070	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AHGSH82_009090	COG1028	Short-chain dehydrogenase reductase Sdr
AHGSH82_009100	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AHGSH82_009120	COG0521	Mo-molybdopterin cofactor biosynthetic process
AHGSH82_009140	COG2966	Psort location CytoplasmicMembrane, score
AHGSH82_009150	COG3610	response to peptide
AHGSH82_009170	COG4175	Glycine betaine
AHGSH82_009180	COG4176	ABC-type proline glycine betaine transport system permease component
AHGSH82_009190	COG2113	Glycine betaine
AHGSH82_009200	COG0175	sulfate reduction
AHGSH82_009210	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AHGSH82_009220	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AHGSH82_009230	COG0384	phenazine biosynthesis protein PhzF
AHGSH82_009240	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AHGSH82_009250	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AHGSH82_009270	COG0786	glutamate:sodium symporter activity
AHGSH82_009280	COG0252	asparaginase activity
AHGSH82_009290	COG3139	Protein of unknown function (DUF1315)
AHGSH82_009330	COG0616	signal peptide processing
AHGSH82_009340	COG0446	pyridine nucleotide-disulphide oxidoreductase
AHGSH82_009340	COG1902	pentaerythritol trinitrate reductase activity
AHGSH82_009350	COG0778	Nitroreductase
AHGSH82_009380	COG2264	protein methyltransferase activity
AHGSH82_009390	COG0604	alcohol dehydrogenase
AHGSH82_009400	COG0583	DNA-binding transcription factor activity
AHGSH82_009410	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHGSH82_009410	COG2190	(PTS) system
AHGSH82_009410	COG1263	PTS System
AHGSH82_009420	COG4145	pantothenate transmembrane transporter activity
AHGSH82_009440	COG0439	Biotin carboxylase
AHGSH82_009450	COG0511	ligase activity, forming carbon-carbon bonds
AHGSH82_009460	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
AHGSH82_009470	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AHGSH82_009490	COG3300	MHYT domain
AHGSH82_009490	COG5001	Diguanylate cyclase
AHGSH82_009530	COG3381	protein complex oligomerization
AHGSH82_009560	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AHGSH82_009590	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AHGSH82_009600	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AHGSH82_009600	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AHGSH82_009630	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
AHGSH82_009640	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AHGSH82_009650	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AHGSH82_009660	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AHGSH82_009710	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AHGSH82_009720	COG0142	geranyltranstransferase activity
AHGSH82_009730	COG1722	exodeoxyribonuclease VII activity
AHGSH82_009740	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AHGSH82_009750	COG1360	Flagellar Motor Protein
AHGSH82_009760	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AHGSH82_009780	COG1534	Rna-binding protein
AHGSH82_009790	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
AHGSH82_009800	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AHGSH82_009810	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AHGSH82_009820	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AHGSH82_009830	COG0149	triose-phosphate isomerase activity
AHGSH82_009840	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AHGSH82_009850	COG0779	Required for maturation of 30S ribosomal subunits
AHGSH82_009860	COG0195	Participates in both transcription termination and antitermination
AHGSH82_009870	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AHGSH82_009880	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AHGSH82_009890	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AHGSH82_009900	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AHGSH82_009910	COG1185	polyribonucleotide nucleotidyltransferase activity
AHGSH82_009920	COG2211	Major facilitator Superfamily
AHGSH82_009940	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
AHGSH82_009960	COG0114	fumarate hydratase activity
AHGSH82_009980	COG1966	Carbon starvation protein
AHGSH82_009990	COG3279	Response regulator of the LytR AlgR family
AHGSH82_010000	COG3275	phosphorelay sensor kinase activity
AHGSH82_010130	COG0312	modulator of DNA gyrase
AHGSH82_010140	COG0312	modulator of DNA gyrase
AHGSH82_010150	COG0716	FMN binding
AHGSH82_010160	COG4974	Belongs to the 'phage' integrase family
AHGSH82_010170	COG3706	GGDEF domain
AHGSH82_010180	COG1970	mechanosensitive ion channel activity
AHGSH82_010200	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AHGSH82_010220	COG0789	Transcriptional regulator
AHGSH82_010250	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AHGSH82_010260	COG3545	Serine hydrolase
AHGSH82_010280	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AHGSH82_010300	COG0321	lipoyl(octanoyl) transferase activity
AHGSH82_010310	COG2921	Belongs to the UPF0250 family
AHGSH82_010320	COG1686	Belongs to the peptidase S11 family
AHGSH82_010330	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AHGSH82_010340	COG2951	lytic endotransglycosylase activity
AHGSH82_010350	COG0772	Belongs to the SEDS family
AHGSH82_010360	COG0768	penicillin binding
AHGSH82_010370	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AHGSH82_010380	COG0799	negative regulation of ribosome biogenesis
AHGSH82_010390	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AHGSH82_010430	COG0495	leucyl-tRNA aminoacylation
AHGSH82_010440	COG2888	peptidyl-tyrosine sulfation
AHGSH82_010450	COG0815	Transfers the fatty acyl group on membrane lipoproteins
AHGSH82_010460	COG4535	Mg2 and Co2 transporter CorC
AHGSH82_010470	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AHGSH82_010480	COG1702	phosphate starvation-inducible protein PhoH
AHGSH82_010490	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AHGSH82_010500	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AHGSH82_010510	COG1335	isochorismatase
AHGSH82_010530	COG3706	GGDEF domain
AHGSH82_010560	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AHGSH82_010580	COG3706	GGDEF domain
AHGSH82_010600	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AHGSH82_010620	COG3647	Membrane
AHGSH82_010630	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AHGSH82_010650	COG0516	GMP reductase activity
AHGSH82_010670	COG0642	Histidine kinase
AHGSH82_010680	COG0745	RESPONSE REGULATOR receiver
AHGSH82_010750	COG3214	Protein conserved in bacteria
AHGSH82_010810	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
AHGSH82_010820	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AHGSH82_010830	COG1053	succinate dehydrogenase
AHGSH82_010860	COG0584	glycerophosphoryl diester phosphodiesterase
AHGSH82_010870	COG1511	domain protein
AHGSH82_010870	COG3264	Mechanosensitive ion channel
AHGSH82_010890	COG0739	heme binding
AHGSH82_010920	COG0583	DNA-binding transcription factor activity
AHGSH82_010960	COG0583	DNA-binding transcription factor activity
AHGSH82_010970	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AHGSH82_011030	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AHGSH82_011040	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AHGSH82_011060	COG0338	D12 class N6 adenine-specific DNA methyltransferase
AHGSH82_011070	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AHGSH82_011080	COG0546	phosphoglycolate phosphatase activity
AHGSH82_011090	COG0180	Tryptophanyl-tRNA synthetase
AHGSH82_011120	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AHGSH82_011140	COG1012	belongs to the aldehyde dehydrogenase family
AHGSH82_011160	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AHGSH82_011180	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AHGSH82_011180	COG1013	pyruvate-flavodoxin oxidoreductase activity
AHGSH82_011180	COG0674	pyruvate-flavodoxin oxidoreductase activity
AHGSH82_011180	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHGSH82_011200	COG0366	Alpha amylase catalytic
AHGSH82_011240	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
AHGSH82_011260	COG0471	metal ion transport
AHGSH82_011260	COG0490	domain, Protein
AHGSH82_011290	COG1349	DNA-binding transcription factor activity
AHGSH82_011310	COG2222	sugar isomerase
AHGSH82_011330	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AHGSH82_011350	COG3715	PTS system
AHGSH82_011360	COG3716	PTS system mannose fructose sorbose family IID component
AHGSH82_011390	COG1028	Short-chain dehydrogenase reductase Sdr
AHGSH82_011400	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
AHGSH82_011410	COG0641	radical SAM
AHGSH82_011420	COG3119	arylsulfatase activity
AHGSH82_011440	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AHGSH82_011450	COG0800	Aldolase
AHGSH82_011470	COG3119	arylsulfatase activity
AHGSH82_011480	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AHGSH82_011490	COG5492	domain, Protein
AHGSH82_011500	COG2801	Transposase and inactivated derivatives
AHGSH82_011520	COG0012	GTP binding
AHGSH82_011530	COG0193	aminoacyl-tRNA hydrolase activity
AHGSH82_011540	COG0737	Belongs to the 5'-nucleotidase family
AHGSH82_011550	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AHGSH82_011560	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
AHGSH82_011570	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
AHGSH82_011580	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
AHGSH82_011590	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AHGSH82_011600	COG2890	protein-(glutamine-N5) methyltransferase activity
AHGSH82_011620	COG2912	Transglutaminase-like superfamily
AHGSH82_011630	COG2877	3-deoxy-8-phosphooctulonate synthase activity
AHGSH82_011640	COG1301	dicarboxylic acid transport
AHGSH82_011660	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AHGSH82_011690	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AHGSH82_011700	COG1115	amino acid carrier protein
AHGSH82_011730	COG0714	Associated with various cellular activities
AHGSH82_011790	COG3104	oligopeptide transport
AHGSH82_011800	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AHGSH82_011810	COG1678	Uncharacterized ACR, COG1678
AHGSH82_011830	COG0189	ligase activity
AHGSH82_011840	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AHGSH82_011860	COG3091	SprT-like family
AHGSH82_011880	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AHGSH82_011920	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
AHGSH82_011930	COG0739	heme binding
AHGSH82_011940	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AHGSH82_011950	COG3408	Glycogen debranching enzyme
AHGSH82_011950	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
AHGSH82_011970	COG1881	PFAM PEBP family protein
AHGSH82_011990	COG0583	DNA-binding transcription factor activity
AHGSH82_012010	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AHGSH82_012030	COG0583	DNA-binding transcription factor activity
AHGSH82_012040	COG1028	Short-chain dehydrogenase reductase Sdr
AHGSH82_012050	COG0616	signal peptide processing
AHGSH82_012060	COG3724	N-succinylarginine dihydrolase activity
AHGSH82_012070	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AHGSH82_012100	COG0840	transmembrane signaling receptor activity
AHGSH82_012130	COG2971	BadF BadG BcrA BcrD
AHGSH82_012150	COG4608	Belongs to the ABC transporter superfamily
AHGSH82_012160	COG0444	Belongs to the ABC transporter superfamily
AHGSH82_012170	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AHGSH82_012180	COG0601	transmembrane transport
AHGSH82_012190	COG4166	transmembrane transport
AHGSH82_012240	COG3220	belongs to the UPF0276 family
AHGSH82_012300	COG1289	transmembrane transporter activity
AHGSH82_012310	COG0303	'Molybdopterin
AHGSH82_012320	COG0746	molybdenum cofactor guanylyltransferase activity
AHGSH82_012340	COG4662	Binding-protein-dependent transport system inner membrane component
AHGSH82_012360	COG2204	response regulator
AHGSH82_012370	COG3852	Histidine kinase
AHGSH82_012380	COG1910	domain protein
AHGSH82_012390	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AHGSH82_012460	COG3383	formate dehydrogenase (NAD+) activity
AHGSH82_012460	COG3383	formate dehydrogenase (NAD+) activity
AHGSH82_012470	COG0437	4 iron, 4 sulfur cluster binding
AHGSH82_012500	COG0281	malic enzyme
AHGSH82_012540	COG2706	6-phosphogluconolactonase activity
AHGSH82_012560	COG3264	Mechanosensitive ion channel
AHGSH82_012560	COG1196	nuclear chromosome segregation
AHGSH82_012570	COG0469	pyruvate kinase activity
AHGSH82_012600	COG4651	solute:proton antiporter activity
AHGSH82_012600	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AHGSH82_012620	COG2974	May be involved in recombination
AHGSH82_012640	COG0420	3'-5' exonuclease activity
AHGSH82_012650	COG0419	ATPase involved in DNA repair
AHGSH82_012670	COG3038	cytochrome b561
AHGSH82_012690	COG0745	RESPONSE REGULATOR receiver
AHGSH82_012690	COG3706	GGDEF domain
AHGSH82_012700	COG2190	(PTS) system
AHGSH82_012720	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHGSH82_012730	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AHGSH82_012740	COG0542	response to heat
AHGSH82_012770	COG1720	tRNA m6t6A37 methyltransferase activity
AHGSH82_012810	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AHGSH82_012820	COG4988	ABC transporter
AHGSH82_012830	COG0745	RESPONSE REGULATOR receiver
AHGSH82_012860	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AHGSH82_012890	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
AHGSH82_012900	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
AHGSH82_012920	COG0083	homoserine kinase activity
AHGSH82_012930	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AHGSH82_012960	COG0488	(ABC) transporter
AHGSH82_013000	COG0813	purine-nucleoside phosphorylase activity
AHGSH82_013030	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHGSH82_013030	COG2205	protein histidine kinase activity
AHGSH82_013040	COG3384	dioxygenase
AHGSH82_013060	COG1283	sodium-dependent phosphate transmembrane transporter activity
AHGSH82_013080	COG0531	amino acid
AHGSH82_013100	COG0531	amino acid
AHGSH82_013140	COG1396	sequence-specific DNA binding
AHGSH82_013140	COG1917	Cupin 2, conserved barrel domain protein
AHGSH82_013150	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AHGSH82_013180	COG3152	Membrane
AHGSH82_013210	COG5433	transposase activity
AHGSH82_013240	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AHGSH82_013260	COG2375	cellular response to nickel ion
AHGSH82_013270	COG1538	Outer membrane efflux protein
AHGSH82_013280	COG0577	efflux transmembrane transporter activity
AHGSH82_013280	COG1136	(ABC) transporter
AHGSH82_013290	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHGSH82_013310	COG1227	inorganic diphosphatase activity
AHGSH82_013320	COG0497	DNA recombination
AHGSH82_013330	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AHGSH82_013340	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AHGSH82_013350	COG0443	Heat shock 70 kDa protein
AHGSH82_013360	COG0484	heat shock protein binding
AHGSH82_013420	COG1285	pathogenesis
AHGSH82_013460	COG0640	Transcriptional regulator
AHGSH82_013520	COG0095	Lipoate-protein ligase
AHGSH82_013560	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AHGSH82_013570	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHGSH82_013610	COG0708	Exodeoxyribonuclease III
AHGSH82_013640	COG2211	Major facilitator Superfamily
AHGSH82_013730	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AHGSH82_013740	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AHGSH82_013750	COG1845	cytochrome c oxidase, subunit III
AHGSH82_013760	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AHGSH82_013770	COG0109	protoheme IX farnesyltransferase activity
AHGSH82_013780	COG2814	Major facilitator Superfamily
AHGSH82_013800	COG0784	Response regulator, receiver
AHGSH82_013800	COG2198	Histidine kinase
AHGSH82_013800	COG2205	protein histidine kinase activity
AHGSH82_013810	COG1879	ABC-type sugar transport system periplasmic component
AHGSH82_013830	COG0745	RESPONSE REGULATOR receiver
AHGSH82_013840	COG3005	denitrification pathway
AHGSH82_013860	COG3381	protein complex oligomerization
AHGSH82_013940	COG2003	Belongs to the UPF0758 family
AHGSH82_014020	COG0583	DNA-binding transcription factor activity
AHGSH82_014050	COG0549	Belongs to the carbamate kinase family
AHGSH82_014060	COG1304	FMN binding
AHGSH82_014070	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AHGSH82_014080	COG1335	isochorismatase
AHGSH82_014130	COG3311	Transcriptional regulator
AHGSH82_014180	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AHGSH82_014240	COG5433	transposase activity
AHGSH82_014260	COG5433	transposase activity
AHGSH82_014300	COG0159	tryptophan synthase activity
AHGSH82_014310	COG0133	tryptophan synthase activity
AHGSH82_014320	COG0135	phosphoribosylanthranilate isomerase activity
AHGSH82_014320	COG0134	indole-3-glycerol-phosphate synthase activity
AHGSH82_014330	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AHGSH82_014340	COG0512	Glutamine amidotransferase of anthranilate synthase
AHGSH82_014340	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AHGSH82_014350	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AHGSH82_014370	COG0009	L-threonylcarbamoyladenylate synthase
AHGSH82_014390	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AHGSH82_014410	COG1946	Acyl-CoA thioesterase
AHGSH82_014460	COG1309	transcriptional regulator
AHGSH82_014470	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHGSH82_014480	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AHGSH82_014490	COG1538	Outer membrane efflux protein
AHGSH82_014510	COG1091	dTDP-4-dehydrorhamnose reductase activity
AHGSH82_014570	COG3754	Rhamnan synthesis protein F
AHGSH82_014580	COG1215	transferase activity, transferring glycosyl groups
AHGSH82_014610	COG2895	sulfate adenylyltransferase (ATP) activity
AHGSH82_014620	COG3273	potassium ion transport
AHGSH82_014620	COG0471	metal ion transport
AHGSH82_014630	COG0529	Catalyzes the synthesis of activated sulfate
AHGSH82_014660	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AHGSH82_014700	COG2801	Transposase and inactivated derivatives
AHGSH82_014700	COG3415	Transposase
AHGSH82_014740	COG1216	Glycosyl transferase, family 2
AHGSH82_014800	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AHGSH82_014810	COG0489	protein tyrosine kinase activity
AHGSH82_014810	COG3206	protein involved in exopolysaccharide biosynthesis
AHGSH82_014850	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AHGSH82_014870	COG3132	Protein of unknown function, DUF480
AHGSH82_014950	COG1278	Cold shock
AHGSH82_015010	COG0697	spore germination
AHGSH82_015020	COG1349	DNA-binding transcription factor activity
AHGSH82_015040	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AHGSH82_015050	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AHGSH82_015080	COG1187	pseudouridine synthase activity
AHGSH82_015110	COG0622	Phosphoesterase
AHGSH82_015140	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
AHGSH82_015150	COG0784	Response regulator, receiver
AHGSH82_015150	COG0835	chemotaxis
AHGSH82_015160	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AHGSH82_015170	COG1815	bacterial-type flagellum-dependent cell motility
AHGSH82_015180	COG1558	bacterial-type flagellum-dependent cell motility
AHGSH82_015210	COG4787	bacterial-type flagellum-dependent cell motility
AHGSH82_015220	COG4786	Flagellar basal body rod
AHGSH82_015230	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
AHGSH82_015240	COG1706	bacterial-type flagellum-dependent cell motility
AHGSH82_015250	COG1705	Flagellar rod assembly protein muramidase FlgJ
AHGSH82_015250	COG3951	Flagellar rod assembly protein muramidase FlgJ
AHGSH82_015260	COG1256	bacterial-type flagellum assembly
AHGSH82_015280	COG2239	Acts as a magnesium transporter
AHGSH82_015290	COG0248	Ppx GppA phosphatase
AHGSH82_015300	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AHGSH82_015310	COG2716	regulation of RNA biosynthetic process
AHGSH82_015340	COG5433	transposase activity
AHGSH82_015350	COG5433	transposase activity
AHGSH82_015360	COG5433	transposase activity
AHGSH82_015370	COG2204	response regulator
AHGSH82_015380	COG3852	Histidine kinase
AHGSH82_015390	COG2204	response regulator
AHGSH82_015400	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AHGSH82_015410	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AHGSH82_015420	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
AHGSH82_015430	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AHGSH82_015480	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AHGSH82_015500	COG0590	tRNA wobble adenosine to inosine editing
AHGSH82_015510	COG0573	inorganic phosphate transmembrane transporter activity
AHGSH82_015520	COG0581	inorganic phosphate transmembrane transporter activity
AHGSH82_015540	COG0704	Plays a role in the regulation of phosphate uptake
AHGSH82_015550	COG1253	flavin adenine dinucleotide binding
AHGSH82_015580	COG0531	amino acid
AHGSH82_015610	COG1126	abc transporter atp-binding protein
AHGSH82_015620	COG0765	amino acid transport
AHGSH82_015630	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHGSH82_015640	COG3706	GGDEF domain
AHGSH82_015650	COG2271	Major facilitator Superfamily
AHGSH82_015680	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AHGSH82_015740	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AHGSH82_015750	COG0477	Major facilitator Superfamily
AHGSH82_015760	COG0123	including yeast histone deacetylase and acetoin utilization protein
AHGSH82_015780	COG1199	ATP-dependent helicase activity
AHGSH82_015810	COG1448	Aminotransferase
AHGSH82_015820	COG0433	COG0433 Predicted ATPase
AHGSH82_015850	COG0658	competence protein
AHGSH82_015850	COG2333	competence protein COMEC
AHGSH82_015860	COG1132	(ABC) transporter
AHGSH82_015870	COG1663	tetraacyldisaccharide 4'-kinase activity
AHGSH82_015880	COG2835	tetraacyldisaccharide 4'-kinase activity
AHGSH82_015890	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
AHGSH82_015900	COG2197	response regulator
AHGSH82_015910	COG0322	excinuclease ABC activity
AHGSH82_016000	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
AHGSH82_016010	COG0437	4 iron, 4 sulfur cluster binding
AHGSH82_016020	COG3301	Polysulphide reductase, NrfD
AHGSH82_016030	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AHGSH82_016050	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AHGSH82_016110	COG5433	transposase activity
AHGSH82_016130	COG2203	Gaf domain
AHGSH82_016130	COG2199	diguanylate cyclase activity
AHGSH82_016190	COG2119	membrane
AHGSH82_016200	COG0023	Translation Initiation Factor
AHGSH82_016250	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AHGSH82_016280	COG2205	protein histidine kinase activity
AHGSH82_016280	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHGSH82_016300	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
AHGSH82_016320	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AHGSH82_016330	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AHGSH82_016340	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AHGSH82_016350	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AHGSH82_016360	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AHGSH82_016380	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AHGSH82_016390	COG0505	Belongs to the CarA family
AHGSH82_016400	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AHGSH82_016420	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AHGSH82_016480	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AHGSH82_016490	COG0513	Belongs to the DEAD box helicase family
AHGSH82_016510	COG4104	PAAR repeat-containing protein
AHGSH82_016540	COG0789	Transcriptional regulator
AHGSH82_016580	COG5433	transposase activity
AHGSH82_016590	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHGSH82_016600	COG0765	amino acid transport
AHGSH82_016620	COG0493	'glutamate synthase
AHGSH82_016630	COG0070	glutamate synthase
AHGSH82_016630	COG0069	glutamate synthase activity
AHGSH82_016630	COG0067	glutamate synthase
AHGSH82_016640	COG1242	4 iron, 4 sulfur cluster binding
AHGSH82_016680	COG5433	transposase activity
AHGSH82_016780	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
AHGSH82_016790	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AHGSH82_016790	COG0574	Belongs to the PEP-utilizing enzyme family
AHGSH82_016870	COG1464	Belongs to the NlpA lipoprotein family
AHGSH82_016880	COG0671	phosphoesterase, PA-phosphatase related
AHGSH82_016890	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AHGSH82_016900	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AHGSH82_016920	COG0101	tRNA pseudouridine synthase activity
AHGSH82_016930	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AHGSH82_016940	COG0285	dihydrofolate synthase activity
AHGSH82_016950	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
AHGSH82_016960	COG2920	part of a sulfur-relay system
AHGSH82_016970	COG1289	transmembrane transporter activity
AHGSH82_016980	COG0670	Belongs to the BI1 family
AHGSH82_017010	COG2194	sulfuric ester hydrolase activity
AHGSH82_017030	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AHGSH82_017030	COG0392	lysyltransferase activity
AHGSH82_017050	COG0840	transmembrane signaling receptor activity
AHGSH82_017060	COG2203	Gaf domain
AHGSH82_017060	COG2199	diguanylate cyclase activity
AHGSH82_017070	COG0564	pseudouridine synthase activity
AHGSH82_017100	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
AHGSH82_017120	COG0625	glutathione transferase activity
AHGSH82_017130	COG0625	glutathione transferase activity
AHGSH82_017150	COG0367	asparagine synthase
AHGSH82_017170	COG4651	solute:proton antiporter activity
AHGSH82_017170	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AHGSH82_017180	COG0647	UMP catabolic process
AHGSH82_017190	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AHGSH82_017200	COG1902	pentaerythritol trinitrate reductase activity
AHGSH82_017210	COG1253	flavin adenine dinucleotide binding
AHGSH82_017230	COG0247	lactate metabolic process
AHGSH82_017230	COG0277	FAD linked oxidase domain protein
AHGSH82_017250	COG2050	protein possibly involved in aromatic compounds catabolism
AHGSH82_017270	COG2056	Na+-H+ antiporter family
AHGSH82_017280	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AHGSH82_017310	COG0346	lactoylglutathione lyase activity
AHGSH82_017320	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AHGSH82_017340	COG4659	FMN binding
AHGSH82_017360	COG4658	electron transport chain
AHGSH82_017380	COG2878	Part of a membrane complex involved in electron transport
AHGSH82_017390	COG4657	Part of a membrane complex involved in electron transport
AHGSH82_017400	COG0697	spore germination
AHGSH82_017430	COG2932	Transcriptional regulator
AHGSH82_017610	COG0640	Transcriptional regulator
AHGSH82_017640	COG4373	Mu-like prophage FluMu protein gp28
AHGSH82_017650	COG4383	Mu-like prophage protein gp29
AHGSH82_017690	COG4388	Caudovirus prohead serine protease
AHGSH82_017700	COG4397	Mu-like prophage major head subunit gpT
AHGSH82_017840	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AHGSH82_017850	COG1288	antiporter activity
AHGSH82_017860	COG0436	Aminotransferase
AHGSH82_017880	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AHGSH82_017890	COG2027	D-alanyl-D-alanine carboxypeptidase
AHGSH82_017900	COG1061	Type III restriction enzyme res subunit
AHGSH82_017910	COG1566	PFAM secretion protein HlyD family protein
AHGSH82_017930	COG1966	Carbon starvation protein
AHGSH82_017940	COG3279	Response regulator of the LytR AlgR family
AHGSH82_017950	COG3275	phosphorelay sensor kinase activity
AHGSH82_017960	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
AHGSH82_017960	COG2199	diguanylate cyclase activity
AHGSH82_017970	COG1012	belongs to the aldehyde dehydrogenase family
AHGSH82_017970	COG1454	alcohol dehydrogenase
AHGSH82_017990	COG2095	MarC family integral membrane protein
AHGSH82_018010	COG0601	transmembrane transport
AHGSH82_018020	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AHGSH82_018030	COG0444	Belongs to the ABC transporter superfamily
AHGSH82_018060	COG0861	Integral membrane protein TerC family
AHGSH82_018070	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AHGSH82_018090	COG1301	dicarboxylic acid transport
AHGSH82_018110	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AHGSH82_018140	COG0537	adenosine 5'-monophosphoramidase activity
AHGSH82_018210	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AHGSH82_018220	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AHGSH82_018240	COG2354	Protein conserved in bacteria
AHGSH82_018280	COG2233	PERMEase
AHGSH82_018300	COG1252	NADH dehydrogenase
AHGSH82_018340	COG0393	Putative heavy-metal-binding
AHGSH82_018360	COG4667	esterase of the alpha-beta hydrolase superfamily
AHGSH82_018370	COG1619	proteins homologs of microcin C7 resistance protein MccF
AHGSH82_018380	COG1368	sulfuric ester hydrolase activity
AHGSH82_018400	COG0527	aspartate kinase activity
AHGSH82_018410	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AHGSH82_018410	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AHGSH82_018420	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AHGSH82_018460	COG0596	Alpha beta hydrolase
AHGSH82_018470	COG0346	lactoylglutathione lyase activity
AHGSH82_018490	COG0583	DNA-binding transcription factor activity
AHGSH82_018500	COG1620	l-lactate permease
AHGSH82_018520	COG1139	Iron-sulfur cluster binding protein
AHGSH82_018550	COG5433	transposase activity
AHGSH82_018590	COG1136	(ABC) transporter
AHGSH82_018610	COG2814	Major facilitator Superfamily
AHGSH82_018640	COG1635	Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur
AHGSH82_018650	COG0672	)-iron permease
AHGSH82_018690	COG0659	secondary active sulfate transmembrane transporter activity
AHGSH82_018730	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AHGSH82_018740	COG0840	transmembrane signaling receptor activity
AHGSH82_018760	COG2201	protein-glutamate methylesterase activity
AHGSH82_018780	COG0835	chemotaxis
AHGSH82_018790	COG0840	transmembrane signaling receptor activity
AHGSH82_018800	COG0643	Histidine kinase
AHGSH82_018800	COG2198	Histidine kinase
AHGSH82_018820	COG0745	RESPONSE REGULATOR receiver
AHGSH82_018830	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
AHGSH82_018840	COG0437	4 iron, 4 sulfur cluster binding
AHGSH82_018850	COG5557	Pfam Polysulphide reductase, NrfD
AHGSH82_018860	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
AHGSH82_018870	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AHGSH82_018880	COG1773	rubredoxin
AHGSH82_018910	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AHGSH82_018930	COG3842	ATPase activity
AHGSH82_018950	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
AHGSH82_018960	COG0375	protein maturation
AHGSH82_018970	COG0309	Hydrogenase expression formation protein (HypE)
AHGSH82_018990	COG0298	carbon dioxide binding
AHGSH82_019000	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
AHGSH82_019020	COG1921	L-seryl-tRNASec selenium transferase activity
AHGSH82_019030	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AHGSH82_019050	COG3260	NADH ubiquinone oxidoreductase 20
AHGSH82_019060	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHGSH82_019070	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
AHGSH82_019070	COG3261	NADH dehydrogenase
AHGSH82_019080	COG0650	Formate hydrogenlyase subunit 4
AHGSH82_019090	COG0651	ATP synthesis coupled electron transport
AHGSH82_019100	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AHGSH82_019110	COG3158	transport of potassium into the cell
AHGSH82_019140	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AHGSH82_019190	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AHGSH82_019200	COG0326	Molecular chaperone. Has ATPase activity
AHGSH82_019210	COG0563	adenylate kinase activity
AHGSH82_019220	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
AHGSH82_019240	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AHGSH82_019270	COG5001	Diguanylate cyclase
AHGSH82_019270	COG3300	MHYT domain
AHGSH82_019280	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AHGSH82_019320	COG1021	2,3-dihydroxybenzoate-AMP ligase
AHGSH82_019330	COG3433	isochorismatase activity
AHGSH82_019330	COG1535	isochorismatase
AHGSH82_019340	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AHGSH82_019350	COG1028	Short-chain dehydrogenase reductase Sdr
AHGSH82_019370	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AHGSH82_019380	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AHGSH82_019400	COG1120	ATPase activity
AHGSH82_019410	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AHGSH82_019420	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AHGSH82_019430	COG4771	TonB-dependent receptor
AHGSH82_019470	COG0598	Magnesium transport protein CorA
AHGSH82_019520	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
AHGSH82_019530	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AHGSH82_019540	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AHGSH82_019570	COG1570	exodeoxyribonuclease VII activity
AHGSH82_019580	COG0697	spore germination
AHGSH82_019620	COG3158	transport of potassium into the cell
AHGSH82_019630	COG0516	GMP reductase activity
AHGSH82_019630	COG0517	IMP dehydrogenase activity
AHGSH82_019640	COG0519	Catalyzes the synthesis of GMP from XMP
AHGSH82_019640	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AHGSH82_019700	COG2169	Transcriptional regulator
AHGSH82_019700	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AHGSH82_019750	COG2062	phosphohistidine phosphatase, SixA
AHGSH82_019770	COG0697	spore germination
AHGSH82_019780	COG4166	transmembrane transport
AHGSH82_019790	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
AHGSH82_019800	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AHGSH82_019820	COG4591	ABC-type transport system involved in lipoprotein release permease component
AHGSH82_019830	COG1136	(ABC) transporter
AHGSH82_019840	COG4591	ABC-type transport system involved in lipoprotein release permease component
AHGSH82_019850	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
AHGSH82_019870	COG0544	peptidyl-prolyl cis-trans isomerase activity
AHGSH82_019880	COG0740	serine-type endopeptidase activity
AHGSH82_019890	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AHGSH82_019900	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AHGSH82_019910	COG0776	regulation of translation
AHGSH82_019920	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AHGSH82_019930	COG0488	(ABC) transporter
AHGSH82_019940	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AHGSH82_019950	COG3162	membrane
AHGSH82_019980	COG1024	Enoyl-CoA hydratase
AHGSH82_019990	COG1115	amino acid carrier protein
AHGSH82_020020	COG1584	GPR1 FUN34 yaaH family protein
AHGSH82_020090	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AHGSH82_020100	COG1960	acyl-CoA dehydrogenase activity
AHGSH82_020120	COG1960	acyl-CoA dehydrogenase activity
AHGSH82_020130	COG1024	Enoyl-CoA hydratase
AHGSH82_020140	COG1024	Enoyl-CoA hydratase
AHGSH82_020160	COG1028	Short-chain dehydrogenase reductase Sdr
AHGSH82_020180	COG0730	response to heat
AHGSH82_020190	COG3706	GGDEF domain
AHGSH82_020200	COG0583	DNA-binding transcription factor activity
AHGSH82_020210	COG2723	6-phospho-beta-galactosidase activity
AHGSH82_020220	COG3300	MHYT domain
AHGSH82_020220	COG5001	Diguanylate cyclase
AHGSH82_020240	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
AHGSH82_020260	COG0583	DNA-binding transcription factor activity
AHGSH82_020270	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
AHGSH82_020280	COG0673	inositol 2-dehydrogenase activity
AHGSH82_020290	COG0583	DNA-binding transcription factor activity
AHGSH82_020310	COG1560	Kdo2-lipid A biosynthetic process
AHGSH82_020320	COG1560	Kdo2-lipid A biosynthetic process
AHGSH82_020370	COG0417	DNA replication proofreading
AHGSH82_020380	COG0534	Mate efflux family protein
AHGSH82_020400	COG0307	riboflavin synthase, alpha
AHGSH82_020420	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AHGSH82_020430	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
AHGSH82_020440	COG0697	spore germination
AHGSH82_020450	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AHGSH82_020530	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AHGSH82_020550	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
AHGSH82_020560	COG2894	cell division
AHGSH82_020570	COG0850	regulation of cytokinetic process
AHGSH82_020580	COG5433	transposase activity
AHGSH82_020590	COG0850	regulation of cytokinetic process
AHGSH82_020600	COG3100	YcgL domain-containing protein
AHGSH82_020610	COG2951	lytic endotransglycosylase activity
AHGSH82_020620	COG1760	l-serine dehydratase
AHGSH82_020630	COG1760	l-serine dehydratase
AHGSH82_020640	COG3123	guanosine phosphorylase activity
AHGSH82_020680	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
AHGSH82_020690	COG2067	long-chain fatty acid transport protein
AHGSH82_020720	COG1595	DNA-templated transcription, initiation
AHGSH82_020780	COG0714	Associated with various cellular activities
AHGSH82_020790	COG0183	Belongs to the thiolase family
AHGSH82_020800	COG1024	Enoyl-CoA hydratase
AHGSH82_020800	COG1250	3-hydroxyacyl-CoA dehydrogenase
AHGSH82_020820	COG4681	YaeQ
AHGSH82_020850	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AHGSH82_020860	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AHGSH82_020870	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AHGSH82_020890	COG0549	Belongs to the carbamate kinase family
AHGSH82_020900	COG0697	spore germination
AHGSH82_020910	COG3608	succinylglutamate desuccinylase aspartoacylase
AHGSH82_020910	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
AHGSH82_020920	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AHGSH82_020940	COG0493	'glutamate synthase
AHGSH82_020940	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AHGSH82_020950	COG0402	S-adenosylhomocysteine deaminase activity
AHGSH82_020960	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AHGSH82_020970	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AHGSH82_020970	COG2080	2 iron, 2 sulfur cluster binding
AHGSH82_020980	COG2233	PERMEase
AHGSH82_020990	COG0402	S-adenosylhomocysteine deaminase activity
AHGSH82_021000	COG2252	PERMEase
AHGSH82_021010	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AHGSH82_021020	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AHGSH82_021030	COG2080	2 iron, 2 sulfur cluster binding
AHGSH82_021050	COG3134	Outer membrane lipoprotein
AHGSH82_021070	COG1288	antiporter activity
AHGSH82_021080	COG0318	PFAM AMP-dependent synthetase and ligase
AHGSH82_021090	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AHGSH82_021090	COG0140	phosphoribosyl-ATP diphosphatase activity
AHGSH82_021100	COG0107	imidazoleglycerol-phosphate synthase activity
AHGSH82_021110	COG0784	Response regulator, receiver
AHGSH82_021110	COG2205	protein histidine kinase activity
AHGSH82_021110	COG2198	Histidine kinase
AHGSH82_021130	COG3437	response regulator, receiver
AHGSH82_021140	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
AHGSH82_021150	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AHGSH82_021160	COG0131	Imidazoleglycerol-phosphate dehydratase
AHGSH82_021160	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AHGSH82_021170	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AHGSH82_021180	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AHGSH82_021190	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
AHGSH82_021210	COG1199	ATP-dependent helicase activity
AHGSH82_021220	COG1214	PFAM Peptidase M22, glycoprotease
AHGSH82_021240	COG0596	Alpha beta hydrolase
AHGSH82_021240	COG2226	methyltransferase
AHGSH82_021240	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AHGSH82_021250	COG0318	PFAM AMP-dependent synthetase and ligase
AHGSH82_021290	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AHGSH82_021300	COG2832	Protein of unknown function (DUF454)
AHGSH82_021310	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AHGSH82_021330	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AHGSH82_021370	COG1643	Atp-dependent helicase
AHGSH82_021390	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
AHGSH82_021410	COG3437	response regulator, receiver
AHGSH82_021420	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AHGSH82_021430	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
AHGSH82_021440	COG0709	Synthesizes selenophosphate from selenide and ATP
AHGSH82_021480	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
AHGSH82_021490	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AHGSH82_021500	COG0840	transmembrane signaling receptor activity
AHGSH82_021510	COG1254	Belongs to the acylphosphatase family
AHGSH82_021520	COG0625	glutathione transferase activity
AHGSH82_021530	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AHGSH82_021530	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AHGSH82_021540	COG0489	protein tyrosine kinase activity
AHGSH82_021550	COG0572	uridine kinase
AHGSH82_021560	COG0717	Belongs to the dCTP deaminase family
AHGSH82_021570	COG0306	phosphate transporter
AHGSH82_021580	COG1530	ribonuclease E activity
AHGSH82_021590	COG0564	pseudouridine synthase activity
AHGSH82_021600	COG0546	phosphoglycolate phosphatase activity
AHGSH82_021610	COG0424	maF-like protein
AHGSH82_021620	COG2814	Major facilitator Superfamily
AHGSH82_021660	COG1399	metal-binding, possibly nucleic acid-binding protein
AHGSH82_021670	COG0333	Belongs to the bacterial ribosomal protein bL32 family
AHGSH82_021680	COG0416	fatty acid biosynthetic process
AHGSH82_021690	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AHGSH82_021710	COG1028	Short-chain dehydrogenase reductase Sdr
AHGSH82_021720	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AHGSH82_021730	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AHGSH82_021740	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AHGSH82_021750	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AHGSH82_021760	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AHGSH82_021770	COG0470	DNA polymerase III
AHGSH82_021780	COG0084	hydrolase, TatD family'
AHGSH82_021810	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AHGSH82_021810	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
AHGSH82_021820	COG3008	intermembrane lipid transfer
AHGSH82_021830	COG2995	paraquat-inducible protein a
AHGSH82_021850	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
AHGSH82_021860	COG0372	Belongs to the citrate synthase family
AHGSH82_021950	COG4221	oxidoreductase activity
AHGSH82_021970	COG3141	response to X-ray
AHGSH82_021990	COG1067	ATP-dependent peptidase activity
AHGSH82_022000	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AHGSH82_022030	COG0488	(ABC) transporter
AHGSH82_022050	COG0116	Belongs to the methyltransferase superfamily
AHGSH82_022050	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
AHGSH82_022070	COG0167	dihydroorotate dehydrogenase activity
AHGSH82_022080	COG2902	Dehydrogenase
AHGSH82_022100	COG0308	aminopeptidase N
AHGSH82_022120	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
AHGSH82_022130	COG1956	GAF domain-containing protein
AHGSH82_022150	COG3278	Belongs to the heme-copper respiratory oxidase family
AHGSH82_022180	COG2010	Cytochrome c
AHGSH82_022230	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AHGSH82_022240	COG0589	response to stress
AHGSH82_022250	COG0037	tRNA processing
AHGSH82_022290	COG1869	D-ribose catabolic process
AHGSH82_022300	COG1129	ABC transporter
AHGSH82_022310	COG1172	Belongs to the binding-protein-dependent transport system permease family
AHGSH82_022320	COG1879	ABC-type sugar transport system periplasmic component
AHGSH82_022330	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AHGSH82_022340	COG1609	Transcriptional regulator
AHGSH82_022350	COG2199	diguanylate cyclase activity
AHGSH82_022370	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AHGSH82_022410	COG0776	regulation of translation
AHGSH82_022420	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AHGSH82_022420	COG0072	phenylalanine-tRNA ligase activity
AHGSH82_022430	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AHGSH82_022440	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AHGSH82_022450	COG0291	Belongs to the bacterial ribosomal protein bL35 family
AHGSH82_022460	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AHGSH82_022470	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AHGSH82_022520	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AHGSH82_022540	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AHGSH82_022550	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AHGSH82_022560	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AHGSH82_022570	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
AHGSH82_022580	COG3313	Fe-S protein
AHGSH82_022600	COG2942	2-epimerase
AHGSH82_022610	COG3716	PTS system mannose fructose sorbose family IID component
AHGSH82_022620	COG3715	PTS system
AHGSH82_022630	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHGSH82_022630	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHGSH82_022660	COG1609	Transcriptional regulator
AHGSH82_022670	COG2140	Oxalate decarboxylase
AHGSH82_022680	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AHGSH82_022680	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
AHGSH82_022680	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AHGSH82_022690	COG1105	Belongs to the carbohydrate kinase PfkB family
AHGSH82_022700	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHGSH82_022700	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHGSH82_022710	COG1609	Transcriptional regulator
AHGSH82_022720	COG0814	amino acid
AHGSH82_022750	COG5654	RES domain protein
AHGSH82_022760	COG0513	Belongs to the DEAD box helicase family
AHGSH82_022780	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
AHGSH82_022790	COG2890	protein-(glutamine-N5) methyltransferase activity
AHGSH82_022800	COG2840	Smr protein MutS2
AHGSH82_022820	COG3706	GGDEF domain
AHGSH82_022880	COG2824	Alkylphosphonate utilization operon protein PhnA
AHGSH82_022910	COG0384	phenazine biosynthesis protein PhzF
AHGSH82_022970	COG0242	peptide deformylase activity
AHGSH82_023010	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AHGSH82_023020	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
AHGSH82_023030	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
AHGSH82_023050	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AHGSH82_023060	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AHGSH82_023080	COG0205	6-phosphofructokinase activity
AHGSH82_023090	COG1473	amidohydrolase
AHGSH82_023100	COG1011	Hydrolase
AHGSH82_023110	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AHGSH82_023140	COG3593	DNA synthesis involved in DNA repair
AHGSH82_023170	COG0583	DNA-binding transcription factor activity
AHGSH82_023180	COG0730	response to heat
AHGSH82_023210	COG1181	Belongs to the D-alanine--D-alanine ligase family
AHGSH82_023230	COG0386	Belongs to the glutathione peroxidase family
AHGSH82_023240	COG0513	Belongs to the DEAD box helicase family
AHGSH82_023250	COG0456	acetyltransferase
AHGSH82_023270	COG1742	UPF0060 membrane protein
AHGSH82_023330	COG2329	Antibiotic biosynthesis monooxygenase
AHGSH82_023340	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
AHGSH82_023400	COG2501	S4 domain
AHGSH82_023420	COG1132	(ABC) transporter
AHGSH82_023430	COG1132	(ABC) transporter
AHGSH82_023450	COG3118	belongs to the thioredoxin family
AHGSH82_023460	COG0471	metal ion transport
AHGSH82_023470	COG0058	SHG alpha-glucan phosphorylase activity
AHGSH82_023530	COG0814	amino acid
AHGSH82_023540	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
AHGSH82_023550	COG0514	ATP-dependent DNA helicase (RecQ)
AHGSH82_023560	COG2766	serine protein kinase
AHGSH82_023580	COG2719	SpoVR family
AHGSH82_023590	COG2186	Transcriptional regulator
AHGSH82_023600	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AHGSH82_023610	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
AHGSH82_023620	COG0586	Pfam SNARE associated Golgi protein
AHGSH82_023640	COG0556	nucleotide-excision repair
AHGSH82_023650	COG0569	domain protein
AHGSH82_023650	COG2985	domain, Protein
AHGSH82_023670	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
AHGSH82_023710	COG4565	transcriptional regulatory protein
AHGSH82_023720	COG3290	protein histidine kinase activity
AHGSH82_023730	COG1940	carbohydrate kinase activity
AHGSH82_023730	COG1846	Transcriptional regulator
AHGSH82_023740	COG0840	transmembrane signaling receptor activity
AHGSH82_023750	COG3012	SEC-C Motif Domain Protein
AHGSH82_023760	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AHGSH82_023770	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
AHGSH82_023780	COG0247	lactate metabolic process
AHGSH82_023810	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
AHGSH82_023820	COG0437	4 iron, 4 sulfur cluster binding
AHGSH82_023830	COG3301	Polysulphide reductase, NrfD
AHGSH82_023840	COG1138	Cytochrome C-type biogenesis protein
AHGSH82_023850	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AHGSH82_023860	COG4235	cytochrome complex assembly
AHGSH82_023860	COG3088	subunit of a heme lyase
AHGSH82_023870	COG1051	belongs to the nudix hydrolase family
AHGSH82_023890	COG3033	Beta-eliminating lyase
AHGSH82_023910	COG3046	protein related to deoxyribodipyrimidine photolyase
AHGSH82_023920	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AHGSH82_023970	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AHGSH82_023980	COG0583	DNA-binding transcription factor activity
AHGSH82_024000	COG4774	siderophore transport
AHGSH82_024010	COG4977	sequence-specific DNA binding
AHGSH82_024030	COG0583	DNA-binding transcription factor activity
AHGSH82_024040	COG2910	NAD(P)H-binding
AHGSH82_024070	COG0612	Peptidase, M16
AHGSH82_024080	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AHGSH82_024090	COG2076	Multidrug Resistance protein
AHGSH82_024100	COG1944	ATP diphosphatase activity
AHGSH82_024110	COG2116	formate transmembrane transporter activity
AHGSH82_024120	COG1882	Formate acetyltransferase
AHGSH82_024130	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AHGSH82_024150	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AHGSH82_024170	COG1840	ABC-type Fe3 transport system, periplasmic component
AHGSH82_024180	COG3842	ATPase activity
AHGSH82_024200	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AHGSH82_024210	COG2983	Belongs to the UPF0260 family
AHGSH82_024230	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AHGSH82_024240	COG0045	succinate-CoA ligase (ADP-forming) activity
AHGSH82_024250	COG0508	dehydrogenase complex catalyzes the overall conversion of
AHGSH82_024260	COG0567	Dehydrogenase, E1 component
AHGSH82_024280	COG1053	succinate dehydrogenase
AHGSH82_024290	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
AHGSH82_024300	COG2009	succinate dehydrogenase
AHGSH82_024350	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AHGSH82_024360	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AHGSH82_024360	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
AHGSH82_024380	COG3069	C4-dicarboxylate transmembrane transporter activity
AHGSH82_024410	COG1451	nucleotide metabolic process
AHGSH82_024440	COG0254	rRNA binding
AHGSH82_024450	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AHGSH82_024470	COG0583	DNA-binding transcription factor activity
AHGSH82_024490	COG1172	Belongs to the binding-protein-dependent transport system permease family
AHGSH82_024510	COG1879	ABC-type sugar transport system periplasmic component
AHGSH82_024520	COG1069	ribulokinase activity
AHGSH82_024540	COG2160	L-arabinose isomerase activity
AHGSH82_024610	COG2801	Transposase and inactivated derivatives
AHGSH82_024670	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
AHGSH82_024770	COG5433	transposase activity
AHGSH82_024790	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AHGSH82_024800	COG3457	Alanine racemase
AHGSH82_024830	COG1735	metal-dependent hydrolase with the TIM-barrel fold
AHGSH82_024850	COG2188	Transcriptional regulator
AHGSH82_025080	COG0616	signal peptide processing
AHGSH82_025110	COG4626	Terminase
AHGSH82_025110	COG1802	Transcriptional regulator
AHGSH82_025200	COG2135	peptidase activity
AHGSH82_025210	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AHGSH82_025220	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AHGSH82_025490	COG3173	Aminoglycoside phosphotransferase
AHGSH82_025580	COG0582	viral genome integration into host DNA
AHGSH82_025590	COG2925	Exonuclease
AHGSH82_025610	COG3345	alpha-galactosidase
AHGSH82_025620	COG1380	Effector of murein hydrolase LrgA
AHGSH82_025630	COG1346	cytolysis
AHGSH82_025640	COG0295	cytidine deaminase activity
AHGSH82_025650	COG1022	Amp-dependent synthetase and ligase
AHGSH82_025680	COG0861	Integral membrane protein TerC family
AHGSH82_025690	COG2885	chlorophyll binding
AHGSH82_025700	COG2199	diguanylate cyclase activity
AHGSH82_025730	COG2154	pterin-4-alpha-carbinolamine dehydratase
AHGSH82_025750	COG3768	UPF0283 membrane protein
AHGSH82_025760	COG3106	COG3106 Predicted ATPase
AHGSH82_025790	COG1842	Phage shock protein A
AHGSH82_025800	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AHGSH82_025820	COG4168	peptide transport system, permease
AHGSH82_025830	COG4171	peptide transport system, permease
AHGSH82_025860	COG4172	Belongs to the ABC transporter superfamily
AHGSH82_025880	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AHGSH82_025890	COG1286	toxin biosynthetic process
AHGSH82_025900	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AHGSH82_025920	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AHGSH82_025930	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
AHGSH82_025940	COG1674	ftsk spoiiie
AHGSH82_025940	COG0531	amino acid
AHGSH82_025970	COG0492	ferredoxin-NADP+ reductase activity
AHGSH82_025980	COG3706	GGDEF domain
AHGSH82_025990	COG3134	Outer membrane lipoprotein
AHGSH82_026000	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
AHGSH82_026010	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
AHGSH82_026020	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AHGSH82_026030	COG0542	response to heat
AHGSH82_026040	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
AHGSH82_026050	COG1278	Cold shock
AHGSH82_026060	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AHGSH82_026100	COG3501	Rhs element vgr protein
AHGSH82_026310	COG3501	Rhs element vgr protein
AHGSH82_026350	COG1435	thymidine kinase activity
AHGSH82_026360	COG1757	Na H antiporter
AHGSH82_026370	COG2916	Histone family protein nucleoid-structuring protein H-NS
AHGSH82_026380	COG2096	Adenosyltransferase
AHGSH82_026390	COG3530	Putative quorum-sensing-regulated virulence factor
AHGSH82_026400	COG0602	queuosine metabolic process
AHGSH82_026410	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
AHGSH82_026450	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
AHGSH82_026470	COG0776	regulation of translation
AHGSH82_026480	COG0539	negative regulation of cytoplasmic translation
AHGSH82_026490	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
AHGSH82_026510	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AHGSH82_026530	COG0583	DNA-binding transcription factor activity
AHGSH82_026570	COG0778	Nitroreductase
AHGSH82_026580	COG3300	MHYT domain
AHGSH82_026580	COG5001	Diguanylate cyclase
AHGSH82_026600	COG0583	DNA-binding transcription factor activity
AHGSH82_026610	COG3437	response regulator, receiver
AHGSH82_026670	COG4989	oxidoreductase activity
AHGSH82_026680	COG0724	RNA recognition motif
AHGSH82_026720	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
AHGSH82_026740	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AHGSH82_026750	COG1360	Flagellar Motor Protein
AHGSH82_026760	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHGSH82_026770	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHGSH82_026780	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHGSH82_026780	COG0649	NAD binding
AHGSH82_026810	COG1034	ATP synthesis coupled electron transport
AHGSH82_026820	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
AHGSH82_026830	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHGSH82_026840	COG0839	Belongs to the complex I subunit 6 family
AHGSH82_026850	COG0713	ATP synthesis coupled electron transport
AHGSH82_026870	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHGSH82_026880	COG1007	ATP synthesis coupled electron transport
AHGSH82_026890	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AHGSH82_026890	COG0047	phosphoribosylformylglycinamidine synthase activity
AHGSH82_026900	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
AHGSH82_026910	COG1645	bacterial-type flagellum-dependent swarming motility
AHGSH82_026920	COG1160	GTP binding
AHGSH82_026930	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AHGSH82_026940	COG2976	Protein conserved in bacteria
AHGSH82_026950	COG0124	histidyl-tRNA synthetase
AHGSH82_026990	COG0820	rRNA (adenine-C2-)-methyltransferase activity
AHGSH82_027000	COG0105	UTP biosynthetic process
AHGSH82_027010	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AHGSH82_027040	COG0633	Ferredoxin
AHGSH82_027050	COG0443	Heat shock 70 kDa protein
AHGSH82_027060	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AHGSH82_027080	COG0822	iron-sulfur transferase activity
AHGSH82_027090	COG1104	cysteine desulfurase activity
AHGSH82_027180	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AHGSH82_027190	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AHGSH82_027200	COG1862	Preprotein translocase
AHGSH82_027210	COG0343	queuine tRNA-ribosyltransferase activity
AHGSH82_027220	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
AHGSH82_027230	COG0517	IMP dehydrogenase activity
AHGSH82_027240	COG0450	alkyl hydroperoxide reductase
AHGSH82_027250	COG3634	alkyl hydroperoxide reductase activity
AHGSH82_027290	COG1393	Belongs to the ArsC family
AHGSH82_027300	COG0798	PFAM Bile acid sodium symporter
AHGSH82_027360	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AHGSH82_027500	COG3039	Transposase
AHGSH82_027510	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AHGSH82_027510	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AHGSH82_027520	COG0509	glycine decarboxylation via glycine cleavage system
AHGSH82_027530	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AHGSH82_027540	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AHGSH82_027550	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AHGSH82_027580	COG2814	Major facilitator Superfamily
AHGSH82_027590	COG0625	glutathione transferase activity
AHGSH82_027610	COG0483	inositol monophosphate 1-phosphatase activity
AHGSH82_027670	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AHGSH82_027710	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AHGSH82_027730	COG2089	acid synthase
AHGSH82_027740	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AHGSH82_027780	COG1083	cytidylyl-transferase
AHGSH82_027880	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AHGSH82_027880	COG0301	tRNA thio-modification
AHGSH82_027900	COG4953	penicillin-binding protein 1C
AHGSH82_027910	COG2373	Large extracellular alpha-helical protein
AHGSH82_027920	COG0446	pyridine nucleotide-disulphide oxidoreductase
AHGSH82_027940	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AHGSH82_027970	COG4215	(ABC) transporter
AHGSH82_027980	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHGSH82_028000	COG2431	L-lysine efflux transmembrane transporter activity
AHGSH82_028010	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AHGSH82_028020	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
AHGSH82_028050	COG1393	Belongs to the ArsC family
AHGSH82_028070	COG4783	chaperone-mediated protein folding
AHGSH82_028080	COG0425	Belongs to the sulfur carrier protein TusA family
AHGSH82_028120	COG3842	ATPase activity
AHGSH82_028140	COG1175	transmembrane transport
AHGSH82_028160	COG3081	Nucleoid-associated protein
AHGSH82_028170	COG3082	Protein of unknown function (DUF1414)
AHGSH82_028180	COG3083	sulfuric ester hydrolase activity
AHGSH82_028190	COG4771	TonB-dependent receptor
AHGSH82_028200	COG1770	oligopeptidase
AHGSH82_028240	COG4574	serine-type endopeptidase inhibitor activity
AHGSH82_028250	COG3085	chromosome segregation
AHGSH82_028260	COG0583	DNA-binding transcription factor activity
AHGSH82_028270	COG1605	Chorismate mutase
AHGSH82_028270	COG0287	Prephenate dehydrogenase
AHGSH82_028280	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AHGSH82_028290	COG0584	glycerophosphoryl diester phosphodiesterase
AHGSH82_028310	COG1349	DNA-binding transcription factor activity
AHGSH82_028320	COG2271	Major facilitator Superfamily
AHGSH82_028330	COG5433	transposase activity
AHGSH82_028340	COG2271	Major facilitator Superfamily
AHGSH82_028350	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AHGSH82_028360	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AHGSH82_028370	COG0583	DNA-binding transcription factor activity
AHGSH82_028410	COG0656	L-ascorbic acid biosynthetic process
AHGSH82_028430	COG2814	Major facilitator Superfamily
AHGSH82_028450	COG1294	oxidase, subunit
AHGSH82_028470	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AHGSH82_028480	COG2979	Protein of unknown function (DUF533)
AHGSH82_028540	COG2271	Major facilitator Superfamily
AHGSH82_028550	COG0583	DNA-binding transcription factor activity
AHGSH82_028570	COG2807	transmembrane transport
AHGSH82_028580	COG1187	pseudouridine synthase activity
AHGSH82_028610	COG0346	lactoylglutathione lyase activity
AHGSH82_028630	COG1061	Type III restriction enzyme res subunit
AHGSH82_028650	COG2964	Protein conserved in bacteria
AHGSH82_028660	COG3681	Belongs to the UPF0597 family
AHGSH82_028680	COG0814	amino acid
AHGSH82_028720	COG1166	arginine decarboxylase activity
AHGSH82_028740	COG2195	Cleaves the N-terminal amino acid of tripeptides
AHGSH82_028800	COG0583	DNA-binding transcription factor activity
AHGSH82_028820	COG2759	Belongs to the formate--tetrahydrofolate ligase family
AHGSH82_028830	COG2759	Belongs to the formate--tetrahydrofolate ligase family
AHGSH82_028840	COG0840	transmembrane signaling receptor activity
AHGSH82_028850	COG0302	gtp cyclohydrolase
AHGSH82_028870	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AHGSH82_028880	COG2267	carboxylic ester hydrolase activity
AHGSH82_028890	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
AHGSH82_028930	COG0314	molybdopterin synthase activity
AHGSH82_028940	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
AHGSH82_028950	COG0315	cyclic pyranopterin monophosphate synthase activity
AHGSH82_028960	COG0521	Mo-molybdopterin cofactor biosynthetic process
AHGSH82_028970	COG3005	denitrification pathway
AHGSH82_028990	COG0348	domain, Protein
AHGSH82_029000	COG0437	4 iron, 4 sulfur cluster binding
AHGSH82_029010	COG0243	molybdopterin cofactor binding
AHGSH82_029030	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AHGSH82_029030	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
AHGSH82_029040	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AHGSH82_029050	COG3850	Histidine kinase
AHGSH82_029060	COG2197	response regulator
AHGSH82_029120	COG0121	glutamine amidotransferase
AHGSH82_029130	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
AHGSH82_029140	COG1960	acyl-CoA dehydrogenase activity
AHGSH82_029160	COG3437	response regulator, receiver
AHGSH82_029160	COG0784	Response regulator, receiver
AHGSH82_029180	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AHGSH82_029190	COG0328	RNA-DNA hybrid ribonuclease activity
AHGSH82_029200	COG2226	methyltransferase
AHGSH82_029210	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AHGSH82_029220	COG0741	lytic transglycosylase activity
AHGSH82_029220	COG1388	LysM domain
AHGSH82_029230	COG3021	interspecies interaction between organisms
AHGSH82_029250	COG1607	acyl-coa hydrolase
AHGSH82_029280	COG0741	lytic transglycosylase activity
AHGSH82_029300	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AHGSH82_029320	COG2911	Protein conserved in bacteria
AHGSH82_029330	COG0729	surface antigen
AHGSH82_029350	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AHGSH82_029360	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AHGSH82_029380	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AHGSH82_029400	COG4134	Bacterial extracellular solute-binding protein
AHGSH82_029420	COG4136	ATPase activity
AHGSH82_029430	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AHGSH82_029440	COG2951	lytic endotransglycosylase activity
AHGSH82_029470	COG1846	Transcriptional regulator
AHGSH82_029490	COG0033	Phosphoglucomutase
AHGSH82_029500	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
AHGSH82_029510	COG0596	Alpha beta hydrolase
AHGSH82_029540	COG0716	FMN binding
AHGSH82_029560	COG0735	belongs to the Fur family
AHGSH82_029570	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AHGSH82_029590	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHGSH82_029590	COG1263	PTS System
AHGSH82_029590	COG2190	(PTS) system
AHGSH82_029600	COG0363	glucosamine-6-phosphate deaminase activity
AHGSH82_029610	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AHGSH82_029620	COG1940	carbohydrate kinase activity
AHGSH82_029620	COG1846	Transcriptional regulator
AHGSH82_029630	COG2194	sulfuric ester hydrolase activity
AHGSH82_029640	COG0217	transcriptional regulatory protein
AHGSH82_029650	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AHGSH82_029660	COG1801	Protein of unknown function DUF72
AHGSH82_029670	COG4106	trans-aconitate 2-methyltransferase activity
AHGSH82_029680	COG0500	methyltransferase
AHGSH82_029720	COG0450	alkyl hydroperoxide reductase
AHGSH82_029730	COG0583	DNA-binding transcription factor activity
AHGSH82_029750	COG0791	NLP P60 protein
AHGSH82_029780	COG1309	transcriptional regulator
AHGSH82_029860	COG0534	Mate efflux family protein
AHGSH82_029900	COG2366	antibiotic biosynthetic process
AHGSH82_029910	COG0674	pyruvate-flavodoxin oxidoreductase activity
AHGSH82_029910	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AHGSH82_029910	COG1013	pyruvate-flavodoxin oxidoreductase activity
AHGSH82_029910	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
AHGSH82_029930	COG0633	Ferredoxin
AHGSH82_029930	COG3217	Mosc domain protein beta barrel domain protein
AHGSH82_029930	COG3217	Mosc domain protein beta barrel domain protein
AHGSH82_029930	COG0633	Ferredoxin
AHGSH82_029950	COG0501	Belongs to the peptidase M48B family
AHGSH82_029960	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AHGSH82_029970	COG1073	alpha beta
AHGSH82_029970	COG2226	methyltransferase
AHGSH82_029980	COG0156	8-amino-7-oxononanoate synthase activity
AHGSH82_029990	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
AHGSH82_030030	COG0017	Asparaginyl-tRNA synthetase
AHGSH82_030040	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AHGSH82_030060	COG1473	amidohydrolase
AHGSH82_030070	COG3069	C4-dicarboxylate transmembrane transporter activity
AHGSH82_030090	COG0583	DNA-binding transcription factor activity
AHGSH82_030100	COG1393	Belongs to the ArsC family
AHGSH82_030110	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AHGSH82_030120	COG1876	peptidase activity
AHGSH82_030140	COG3263	regulation of cellular component size
AHGSH82_030180	COG1280	lysine exporter protein (LysE YggA)
AHGSH82_030260	COG1454	alcohol dehydrogenase
AHGSH82_030270	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AHGSH82_030280	COG0702	epimerase
AHGSH82_030300	COG2867	negative regulation of translational initiation
AHGSH82_030310	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
AHGSH82_030330	COG2814	Major facilitator Superfamily
AHGSH82_030330	COG0477	Major facilitator Superfamily
AHGSH82_030340	COG0457	Tetratricopeptide repeat
AHGSH82_030350	COG1940	carbohydrate kinase activity
AHGSH82_030360	COG0583	DNA-binding transcription factor activity
AHGSH82_030370	COG2610	gluconate transmembrane transporter activity
AHGSH82_030380	COG3048	D-serine ammonia-lyase activity
AHGSH82_030400	COG0538	isocitrate dehydrogenase activity
AHGSH82_030410	COG2207	Transcriptional regulator
AHGSH82_030450	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AHGSH82_030480	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AHGSH82_030490	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHGSH82_030490	COG1263	PTS System
AHGSH82_030500	COG1609	Transcriptional regulator
AHGSH82_030510	COG0446	pyridine nucleotide-disulphide oxidoreductase
AHGSH82_030510	COG1902	pentaerythritol trinitrate reductase activity
AHGSH82_030520	COG0789	Transcriptional regulator
AHGSH82_030540	COG0456	acetyltransferase
AHGSH82_030550	COG3081	Nucleoid-associated protein
AHGSH82_030570	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AHGSH82_030570	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AHGSH82_030570	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHGSH82_030590	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AHGSH82_030610	COG1187	pseudouridine synthase activity
AHGSH82_030630	COG0482	sulfurtransferase activity
AHGSH82_030640	COG2915	High frequency lysogenization protein hflD homolog
AHGSH82_030650	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AHGSH82_030660	COG2850	peptidyl-arginine hydroxylation
AHGSH82_030670	COG3153	acetyltransferase
AHGSH82_030690	COG0625	glutathione transferase activity
AHGSH82_030700	COG0259	pyridoxamine-phosphate oxidase activity
AHGSH82_030730	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AHGSH82_030730	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AHGSH82_030740	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
AHGSH82_030770	COG3088	subunit of a heme lyase
AHGSH82_030770	COG4235	cytochrome complex assembly
AHGSH82_030780	COG4235	cytochrome complex assembly
AHGSH82_030780	COG3088	subunit of a heme lyase
AHGSH82_030790	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AHGSH82_030800	COG1138	Cytochrome C-type biogenesis protein
AHGSH82_030810	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
AHGSH82_030820	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AHGSH82_030830	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AHGSH82_030840	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AHGSH82_030870	COG0835	chemotaxis
AHGSH82_030890	COG1192	Involved in chromosome partitioning
AHGSH82_030900	COG1360	Flagellar Motor Protein
AHGSH82_030910	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AHGSH82_030920	COG2201	protein-glutamate methylesterase activity
AHGSH82_030930	COG2198	Histidine kinase
AHGSH82_030930	COG0643	Histidine kinase
AHGSH82_030940	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
AHGSH82_030970	COG0455	bacterial-type flagellum organization
AHGSH82_030990	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AHGSH82_031010	COG1684	flagellar biosynthetic protein fliR
AHGSH82_031020	COG1987	bacterial-type flagellum assembly
AHGSH82_031050	COG5433	transposase activity
AHGSH82_031140	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AHGSH82_031160	COG1677	Flagellar hook-basal body complex protein FliE
AHGSH82_031190	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AHGSH82_031210	COG3064	Membrane
AHGSH82_031210	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
AHGSH82_031210	COG1073	alpha beta
AHGSH82_031220	COG2994	toxin metabolic process
AHGSH82_031240	COG5433	transposase activity
AHGSH82_031250	COG2274	protein secretion by the type I secretion system
AHGSH82_031270	COG2274	protein secretion by the type I secretion system
AHGSH82_031280	COG0745	RESPONSE REGULATOR receiver
AHGSH82_031310	COG1737	Transcriptional regulator
AHGSH82_031320	COG0469	pyruvate kinase activity
AHGSH82_031340	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AHGSH82_031350	COG1960	acyl-CoA dehydrogenase activity
AHGSH82_031370	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AHGSH82_031390	COG5433	transposase activity
AHGSH82_031430	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
AHGSH82_031430	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AHGSH82_031570	COG0243	molybdopterin cofactor binding
AHGSH82_031590	COG0583	DNA-binding transcription factor activity
AHGSH82_031630	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
AHGSH82_031640	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
AHGSH82_031650	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
AHGSH82_031660	COG1012	belongs to the aldehyde dehydrogenase family
AHGSH82_031660	COG1454	alcohol dehydrogenase
AHGSH82_031680	COG1012	belongs to the aldehyde dehydrogenase family
AHGSH82_031680	COG1454	alcohol dehydrogenase
AHGSH82_031690	COG1882	Formate acetyltransferase
AHGSH82_031700	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AHGSH82_031710	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
AHGSH82_031720	COG4869	propanediol catabolic process
AHGSH82_031760	COG5002	protein histidine kinase activity
AHGSH82_031770	COG0745	RESPONSE REGULATOR receiver
AHGSH82_031780	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHGSH82_031790	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AHGSH82_031800	COG1376	ErfK ybiS ycfS ynhG family protein
AHGSH82_031800	COG1388	LysM domain
AHGSH82_031830	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
AHGSH82_031840	COG0791	NLP P60 protein
AHGSH82_031850	COG2091	lysine biosynthetic process via aminoadipic acid
AHGSH82_031860	COG3118	belongs to the thioredoxin family
AHGSH82_031880	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AHGSH82_031890	COG0788	formyltetrahydrofolate deformylase activity
AHGSH82_031910	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AHGSH82_031950	COG0366	Alpha amylase catalytic
AHGSH82_031960	COG0739	heme binding
AHGSH82_031960	COG0741	lytic transglycosylase activity
AHGSH82_031960	COG1196	nuclear chromosome segregation
AHGSH82_031970	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AHGSH82_031980	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
AHGSH82_032000	COG0673	inositol 2-dehydrogenase activity
AHGSH82_032060	COG5433	transposase activity
AHGSH82_032080	COG1032	radical SAM domain protein
AHGSH82_032100	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AHGSH82_032110	COG1566	PFAM secretion protein HlyD family protein
AHGSH82_032120	COG2203	Gaf domain
AHGSH82_032120	COG2199	diguanylate cyclase activity
AHGSH82_032130	COG1752	Esterase of the alpha-beta hydrolase superfamily
AHGSH82_032140	COG0733	neurotransmitter:sodium symporter activity
AHGSH82_032190	COG2885	chlorophyll binding
AHGSH82_032190	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AHGSH82_032200	COG0281	malic enzyme
AHGSH82_032220	COG0534	Mate efflux family protein
AHGSH82_032240	COG0745	RESPONSE REGULATOR receiver
AHGSH82_032240	COG3706	GGDEF domain
AHGSH82_032250	COG2233	PERMEase
AHGSH82_032260	COG0095	Lipoate-protein ligase
AHGSH82_032270	COG1115	amino acid carrier protein
AHGSH82_032280	COG0019	diaminopimelate decarboxylase activity
AHGSH82_032320	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
AHGSH82_032360	COG1131	(ABC) transporter
AHGSH82_032370	COG0545	Peptidyl-prolyl cis-trans isomerase
AHGSH82_032410	COG4783	chaperone-mediated protein folding
AHGSH82_032430	COG5002	protein histidine kinase activity
AHGSH82_032440	COG0745	RESPONSE REGULATOR receiver
AHGSH82_032450	COG0346	lactoylglutathione lyase activity
AHGSH82_032460	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AHGSH82_032470	COG1960	acyl-CoA dehydrogenase activity
AHGSH82_032480	COG3284	Transcriptional regulator
AHGSH82_032490	COG1012	belongs to the aldehyde dehydrogenase family
AHGSH82_032510	COG0697	spore germination
AHGSH82_032520	COG4565	transcriptional regulatory protein
AHGSH82_032530	COG3290	protein histidine kinase activity
AHGSH82_032540	COG0281	malic enzyme
AHGSH82_032570	COG1846	Transcriptional regulator
AHGSH82_032580	COG1566	PFAM secretion protein HlyD family protein
AHGSH82_032640	COG0602	queuosine metabolic process
AHGSH82_032650	COG1328	CTP reductase activity
AHGSH82_032670	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AHGSH82_032680	COG3115	cell septum assembly
AHGSH82_032690	COG1196	nuclear chromosome segregation
AHGSH82_032710	COG2860	membrane
AHGSH82_032730	COG3108	Peptidase M15
AHGSH82_032740	COG2989	Protein conserved in bacteria
AHGSH82_032770	COG0463	Glycosyl transferase, family 2
AHGSH82_032800	COG0366	Alpha amylase catalytic
AHGSH82_032870	COG3706	GGDEF domain
AHGSH82_032880	COG0037	tRNA processing
AHGSH82_032890	COG3590	peptidase
AHGSH82_032910	COG0488	(ABC) transporter
AHGSH82_032930	COG0531	amino acid
AHGSH82_032950	COG1073	alpha beta
AHGSH82_032960	COG1073	alpha beta
AHGSH82_032980	COG1234	tRNA 3'-trailer cleavage
AHGSH82_032990	COG0814	amino acid
AHGSH82_033020	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
AHGSH82_033030	COG1982	Orn Lys Arg decarboxylase major
AHGSH82_033040	COG0531	amino acid
AHGSH82_033060	COG3710	Transcriptional regulator
AHGSH82_033070	COG0825	malonyl-CoA metabolic process
AHGSH82_033090	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AHGSH82_033100	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AHGSH82_033110	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AHGSH82_033120	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AHGSH82_033130	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AHGSH82_033160	COG0750	zinc metalloprotease
AHGSH82_033170	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
AHGSH82_033180	COG0575	Belongs to the CDS family
AHGSH82_033200	COG0233	cytoplasmic translational termination
AHGSH82_033210	COG0528	UMP kinase activity
AHGSH82_033220	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AHGSH82_033230	COG0052	Belongs to the universal ribosomal protein uS2 family
AHGSH82_033240	COG0024	Methionine aminopeptidase
AHGSH82_033250	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
AHGSH82_033260	COG2171	N-acyltransferase activity
AHGSH82_033280	COG1263	PTS System
AHGSH82_033280	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHGSH82_033300	COG4580	involved in the transport of maltose and maltodextrins
AHGSH82_033320	COG0564	pseudouridine synthase activity
AHGSH82_033330	COG3098	single-species biofilm formation
AHGSH82_033380	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
AHGSH82_033400	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
AHGSH82_033400	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
AHGSH82_033420	COG3706	GGDEF domain
AHGSH82_033430	COG1611	Belongs to the LOG family
AHGSH82_033440	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AHGSH82_033450	COG0473	3-isopropylmalate dehydrogenase activity
AHGSH82_033470	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
AHGSH82_033480	COG2363	Small membrane protein
AHGSH82_033500	COG0583	DNA-binding transcription factor activity
AHGSH82_033510	COG0840	transmembrane signaling receptor activity
AHGSH82_033520	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AHGSH82_033550	COG1477	protein flavinylation
AHGSH82_033560	COG2871	sodium ion transport
AHGSH82_033570	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AHGSH82_033580	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AHGSH82_033590	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AHGSH82_033600	COG1805	sodium ion transport
AHGSH82_033610	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AHGSH82_033630	COG0271	Belongs to the BolA IbaG family
AHGSH82_033640	COG2813	Specifically methylates the guanine in position
AHGSH82_033660	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AHGSH82_033680	COG2211	Major facilitator Superfamily
AHGSH82_033690	COG3248	Nucleoside-binding outer membrane protein
AHGSH82_033700	COG1666	GTP binding
AHGSH82_033710	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AHGSH82_033720	COG0693	protein deglycase activity
AHGSH82_033800	COG3501	Rhs element vgr protein
AHGSH82_033830	COG2771	luxR family
AHGSH82_033840	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AHGSH82_033840	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AHGSH82_033850	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AHGSH82_033870	COG1151	hydroxylamine reductase activity
AHGSH82_033880	COG0783	Belongs to the Dps family
AHGSH82_033930	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AHGSH82_033960	COG4221	oxidoreductase activity
AHGSH82_033980	COG0415	Belongs to the DNA photolyase family
AHGSH82_033990	COG0789	Transcriptional regulator
AHGSH82_034000	COG3272	Protein of unknown function (DUF1722)
AHGSH82_034060	COG1605	Chorismate mutase
AHGSH82_034060	COG0077	Prephenate dehydratase
AHGSH82_034110	COG3710	Transcriptional regulator
AHGSH82_034130	COG5001	Diguanylate cyclase
AHGSH82_034180	COG4932	domain protein
AHGSH82_034180	COG2373	Large extracellular alpha-helical protein
AHGSH82_034180	COG1388	LysM domain
AHGSH82_034210	COG1349	DNA-binding transcription factor activity
AHGSH82_034220	COG2084	Dehydrogenase
AHGSH82_034240	COG0235	Class ii aldolase
AHGSH82_034250	COG3622	Belongs to the hyi family
AHGSH82_034260	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AHGSH82_034270	COG2610	gluconate transmembrane transporter activity
AHGSH82_034310	COG0300	oxidoreductase activity
AHGSH82_034360	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
AHGSH82_034390	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AHGSH82_034420	COG0826	peptidase U32
AHGSH82_034430	COG1280	lysine exporter protein (LysE YggA)
AHGSH82_034460	COG0840	transmembrane signaling receptor activity
AHGSH82_034470	COG0745	RESPONSE REGULATOR receiver
AHGSH82_034490	COG2198	Histidine kinase
AHGSH82_034490	COG0643	Histidine kinase
AHGSH82_034510	COG0835	chemotaxis
AHGSH82_034520	COG0840	transmembrane signaling receptor activity
AHGSH82_034540	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
AHGSH82_034550	COG2201	protein-glutamate methylesterase activity
AHGSH82_034560	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AHGSH82_034590	COG2197	response regulator
AHGSH82_034640	COG2200	EAL domain
AHGSH82_034640	COG2203	Gaf domain
AHGSH82_034640	COG2199	diguanylate cyclase activity
AHGSH82_034660	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AHGSH82_034670	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AHGSH82_034680	COG0305	Participates in initiation and elongation during chromosome replication
AHGSH82_034710	COG2200	EAL domain
AHGSH82_034720	COG0737	Belongs to the 5'-nucleotidase family
AHGSH82_034760	COG2204	response regulator
AHGSH82_034770	COG0545	Peptidyl-prolyl cis-trans isomerase
AHGSH82_034790	COG2900	Belongs to the SlyX family
AHGSH82_034800	COG1047	Peptidyl-prolyl cis-trans
AHGSH82_034810	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
AHGSH82_034830	COG0835	chemotaxis
AHGSH82_034830	COG0784	Response regulator, receiver
AHGSH82_034840	COG0429	hydrolase of the alpha beta-hydrolase fold
AHGSH82_034850	COG3706	GGDEF domain
AHGSH82_034850	COG5001	Diguanylate cyclase
AHGSH82_034850	COG2203	Gaf domain
AHGSH82_034850	COG4251	negative regulation of phosphorylation
AHGSH82_034860	COG3089	Belongs to the UPF0270 family
AHGSH82_034880	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AHGSH82_034890	COG0463	Glycosyl transferase, family 2
AHGSH82_034900	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AHGSH82_034900	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AHGSH82_034910	COG0726	polysaccharide deacetylase
AHGSH82_034920	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AHGSH82_034930	COG2076	Multidrug Resistance protein
AHGSH82_034940	COG2076	Multidrug Resistance protein
AHGSH82_034950	COG3954	Phosphoribulokinase
AHGSH82_034980	COG1765	OsmC-like protein
AHGSH82_034990	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AHGSH82_035000	COG2226	methyltransferase
AHGSH82_035010	COG3397	chitin binding
AHGSH82_035040	COG2205	protein histidine kinase activity
AHGSH82_035040	COG2202	Pas domain
AHGSH82_035060	COG3655	Transcriptional regulator
AHGSH82_035070	COG2814	Major facilitator Superfamily
AHGSH82_035080	COG4771	TonB-dependent receptor
AHGSH82_035120	COG0748	coenzyme F420 binding
AHGSH82_035130	COG3721	Heme iron utilization protein
AHGSH82_035150	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AHGSH82_035200	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AHGSH82_035210	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AHGSH82_035220	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
AHGSH82_035230	COG0583	DNA-binding transcription factor activity
AHGSH82_035260	COG0741	lytic transglycosylase activity
AHGSH82_035270	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AHGSH82_035300	COG0488	(ABC) transporter
AHGSH82_035320	COG2252	PERMEase
AHGSH82_035330	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AHGSH82_035340	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AHGSH82_035350	COG3178	'Phosphotransferase
AHGSH82_035360	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AHGSH82_035380	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AHGSH82_035390	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AHGSH82_035410	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AHGSH82_035430	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AHGSH82_035440	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
AHGSH82_035470	COG0318	PFAM AMP-dependent synthetase and ligase
AHGSH82_035490	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AHGSH82_035500	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AHGSH82_035510	COG0261	This protein binds to 23S rRNA in the presence of protein L20
AHGSH82_035520	COG0142	geranyltranstransferase activity
AHGSH82_035530	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
AHGSH82_035540	COG0330	HflC and HflK could
AHGSH82_035550	COG0330	HflC and HflK could
AHGSH82_035560	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AHGSH82_035570	COG1923	regulation of RNA biosynthetic process
AHGSH82_035580	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AHGSH82_035590	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AHGSH82_035610	COG0802	atpase or kinase
AHGSH82_035620	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AHGSH82_035620	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AHGSH82_035630	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AHGSH82_035660	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AHGSH82_035670	COG2011	ABC-type metal ion transport system permease component
AHGSH82_035680	COG1464	Belongs to the NlpA lipoprotein family
AHGSH82_035700	COG0840	transmembrane signaling receptor activity
AHGSH82_035750	COG0784	Response regulator, receiver
AHGSH82_035750	COG2198	Histidine kinase
AHGSH82_035750	COG5002	protein histidine kinase activity
AHGSH82_035790	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
AHGSH82_035820	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AHGSH82_035830	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
AHGSH82_035850	COG2716	regulation of RNA biosynthetic process
AHGSH82_035860	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AHGSH82_035870	COG3013	Belongs to the UPF0304 family
AHGSH82_035880	COG3092	negative regulation of chromosome organization
AHGSH82_035890	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AHGSH82_035900	COG0857	belongs to the CobB CobQ family
AHGSH82_035900	COG0280	phosphate acetyltransferase
AHGSH82_035930	COG0028	Belongs to the TPP enzyme family
AHGSH82_035950	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AHGSH82_035960	COG0671	phosphoesterase, PA-phosphatase related
AHGSH82_035980	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AHGSH82_035990	COG0473	3-isopropylmalate dehydrogenase activity
AHGSH82_036000	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
AHGSH82_036010	COG0066	3-isopropylmalate dehydratase activity
AHGSH82_036040	COG4143	(ABC) transporter
AHGSH82_036050	COG1178	ABC-type Fe3 transport system permease component
AHGSH82_036060	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
AHGSH82_036070	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
AHGSH82_036120	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AHGSH82_036130	COG0564	pseudouridine synthase activity
AHGSH82_036150	COG3300	MHYT domain
AHGSH82_036150	COG5001	Diguanylate cyclase
AHGSH82_036170	COG0459	protein refolding
AHGSH82_036180	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AHGSH82_036190	COG0534	Mate efflux family protein
AHGSH82_036200	COG3030	protein affecting phage T7 exclusion by the F plasmid
AHGSH82_036210	COG1027	Aspartate ammonia-lyase
AHGSH82_036220	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AHGSH82_036240	COG0477	Major facilitator Superfamily
AHGSH82_036270	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AHGSH82_036280	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AHGSH82_036300	COG0673	inositol 2-dehydrogenase activity
AHGSH82_036320	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AHGSH82_036330	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AHGSH82_036340	COG3036	rescue of stalled ribosome
AHGSH82_036350	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AHGSH82_036370	COG0138	bifunctional purine biosynthesis protein purh
AHGSH82_036380	COG0151	Belongs to the GarS family
AHGSH82_036420	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AHGSH82_036430	COG0358	DNA primase activity
AHGSH82_036450	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AHGSH82_036460	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AHGSH82_036480	COG1388	LysM domain
AHGSH82_036480	COG4942	peptidase
AHGSH82_036490	COG1238	metal cluster binding
AHGSH82_036500	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AHGSH82_036510	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
AHGSH82_036520	COG0585	pseudouridine synthase activity
AHGSH82_036540	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
AHGSH82_036550	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
AHGSH82_036560	COG0148	phosphopyruvate hydratase activity
AHGSH82_036570	COG0504	CTP synthase activity
AHGSH82_036580	COG3956	TIGRFAM MazG family protein
AHGSH82_036590	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AHGSH82_036600	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AHGSH82_036620	COG4807	Protein conserved in bacteria
AHGSH82_036630	COG3023	N-Acetylmuramoyl-L-alanine amidase
AHGSH82_036650	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AHGSH82_036660	COG1381	Involved in DNA repair and RecF pathway recombination
AHGSH82_036680	COG0571	ribonuclease III activity
AHGSH82_036690	COG0681	Belongs to the peptidase S26 family
AHGSH82_036700	COG0481	GTPase activity
AHGSH82_036730	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
AHGSH82_036740	COG1595	DNA-templated transcription, initiation
AHGSH82_036750	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AHGSH82_036770	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
AHGSH82_036850	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AHGSH82_036870	COG0126	phosphoglycerate kinase activity
AHGSH82_036880	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AHGSH82_036890	COG1940	carbohydrate kinase activity
AHGSH82_036900	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
AHGSH82_036930	COG4991	sh3 domain protein
AHGSH82_036940	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AHGSH82_036970	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
AHGSH82_037010	COG1505	serine-type exopeptidase activity
AHGSH82_037020	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AHGSH82_037030	COG0765	amino acid transport
AHGSH82_037040	COG0765	amino acid transport
AHGSH82_037050	COG1126	abc transporter atp-binding protein
AHGSH82_037060	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHGSH82_037070	COG0577	efflux transmembrane transporter activity
AHGSH82_037070	COG1136	(ABC) transporter
AHGSH82_037080	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHGSH82_037090	COG0745	RESPONSE REGULATOR receiver
AHGSH82_037100	COG2205	protein histidine kinase activity
AHGSH82_037110	COG2816	NAD+ diphosphatase activity
AHGSH82_037120	COG2070	2-Nitropropane dioxygenase
AHGSH82_037170	COG1858	cytochrome C peroxidase
AHGSH82_037180	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
AHGSH82_037220	COG0513	Belongs to the DEAD box helicase family
AHGSH82_037260	COG0154	amidase activity
AHGSH82_037300	COG1902	pentaerythritol trinitrate reductase activity
AHGSH82_037310	COG0456	acetyltransferase
AHGSH82_037360	COG3706	GGDEF domain
AHGSH82_037360	COG0745	RESPONSE REGULATOR receiver
AHGSH82_037370	COG3300	MHYT domain
AHGSH82_037370	COG5001	Diguanylate cyclase
AHGSH82_037390	COG0714	Associated with various cellular activities
AHGSH82_037430	COG1022	Amp-dependent synthetase and ligase
AHGSH82_037440	COG2918	glutathione biosynthetic process
AHGSH82_037450	COG0612	Peptidase, M16
AHGSH82_037460	COG1238	metal cluster binding
AHGSH82_037510	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AHGSH82_037520	COG0359	binds to the 23S rRNA
AHGSH82_037530	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AHGSH82_037540	COG0360	Binds together with S18 to 16S ribosomal RNA
AHGSH82_037550	COG1914	H( )-stimulated, divalent metal cation uptake system
AHGSH82_037590	COG2153	protein acetylation
AHGSH82_037610	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AHGSH82_037620	COG0557	exoribonuclease II activity
AHGSH82_037630	COG3706	GGDEF domain
AHGSH82_037640	COG1854	S-ribosylhomocysteine lyase activity
AHGSH82_037670	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AHGSH82_037670	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AHGSH82_037790	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
AHGSH82_037800	COG1047	Peptidyl-prolyl cis-trans
AHGSH82_037810	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AHGSH82_037820	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AHGSH82_037830	COG0196	riboflavin kinase activity
AHGSH82_037840	COG0728	peptidoglycan biosynthetic process
AHGSH82_037850	COG0268	Binds directly to 16S ribosomal RNA
AHGSH82_037860	COG0640	Transcriptional regulator
AHGSH82_037870	COG0583	DNA-binding transcription factor activity
AHGSH82_037890	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AHGSH82_037900	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AHGSH82_037910	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AHGSH82_037930	COG1051	belongs to the nudix hydrolase family
AHGSH82_037940	COG3066	DNA modification
AHGSH82_037960	COG0335	large ribosomal subunit rRNA binding
AHGSH82_037970	COG0336	Belongs to the RNA methyltransferase TrmD family
AHGSH82_037980	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AHGSH82_037990	COG0228	four-way junction DNA binding
AHGSH82_038000	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AHGSH82_038010	COG4137	Cytochrome C assembly protein
AHGSH82_038020	COG4536	flavin adenine dinucleotide binding
AHGSH82_038040	COG1017	nitric oxide dioxygenase activity
AHGSH82_038040	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AHGSH82_038050	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
AHGSH82_038060	COG0039	L-malate dehydrogenase activity
AHGSH82_038070	COG4160	amino acid transport
AHGSH82_038080	COG4215	(ABC) transporter
AHGSH82_038090	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHGSH82_038100	COG1126	abc transporter atp-binding protein
AHGSH82_038110	COG1438	arginine binding
AHGSH82_038120	COG2837	iron assimilation
AHGSH82_038130	COG3842	ATPase activity
AHGSH82_038150	COG1840	ABC-type Fe3 transport system, periplasmic component
AHGSH82_038160	COG0347	Belongs to the P(II) protein family
AHGSH82_038190	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AHGSH82_038200	COG0583	DNA-binding transcription factor activity
AHGSH82_038230	COG1929	Belongs to the glycerate kinase type-1 family
AHGSH82_038240	COG2610	gluconate transmembrane transporter activity
AHGSH82_038250	COG3835	regulator
AHGSH82_038280	COG3112	Uncharacterised protein family (UPF0231)
AHGSH82_038310	COG0840	transmembrane signaling receptor activity
AHGSH82_038320	COG3568	Endonuclease Exonuclease Phosphatase
AHGSH82_038350	COG0513	Belongs to the DEAD box helicase family
AHGSH82_038430	COG1448	Aminotransferase
AHGSH82_038460	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AHGSH82_038470	COG1328	CTP reductase activity
AHGSH82_038510	COG0793	Belongs to the peptidase S41A family
AHGSH82_038510	COG4946	Tricorn protease homolog
AHGSH82_038580	COG0840	transmembrane signaling receptor activity
AHGSH82_038590	COG3397	chitin binding
AHGSH82_038600	COG0583	DNA-binding transcription factor activity
AHGSH82_038610	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
AHGSH82_038620	COG4208	sulfate ABC transporter
AHGSH82_038630	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
AHGSH82_038650	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
AHGSH82_038660	COG3174	membrane
AHGSH82_038670	COG0110	maltose O-acetyltransferase activity
AHGSH82_038740	COG0165	Argininosuccinate lyase
AHGSH82_038750	COG0137	argininosuccinate synthase activity
AHGSH82_038770	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AHGSH82_038780	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AHGSH82_038800	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
AHGSH82_038820	COG0527	aspartate kinase activity
AHGSH82_038820	COG0460	homoserine dehydrogenase
AHGSH82_038830	COG0626	cystathionine gamma-synthase activity
AHGSH82_038850	COG3708	Transcriptional regulator
AHGSH82_038850	COG2207	Transcriptional regulator
AHGSH82_038860	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AHGSH82_038870	COG0814	amino acid
AHGSH82_038880	COG1218	3'(2'),5'-bisphosphate nucleotidase
AHGSH82_038890	COG0494	nUDIX hydrolase
AHGSH82_038900	COG1011	Hydrolase
AHGSH82_038910	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AHGSH82_038940	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
AHGSH82_038960	COG3156	type II secretion system protein K
AHGSH82_038970	COG4795	General secretion pathway protein
AHGSH82_038980	COG2165	general secretion pathway protein
AHGSH82_039010	COG2165	general secretion pathway protein
AHGSH82_039020	COG1459	type II secretion system
AHGSH82_039030	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AHGSH82_039050	COG3031	protein transport across the cell outer membrane
AHGSH82_039070	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AHGSH82_039120	COG0456	acetyltransferase
AHGSH82_039130	COG3133	Outer membrane lipoprotein
AHGSH82_039160	COG2771	luxR family
AHGSH82_039170	COG3916	Acyl-homoserine-lactone synthase
AHGSH82_039190	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
AHGSH82_039200	COG1309	transcriptional regulator
AHGSH82_039220	COG2213	PTS system mannitol-specific
AHGSH82_039220	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHGSH82_039230	COG0246	Mannitol dehydrogenase
AHGSH82_039240	COG3722	fumarate hydratase activity
AHGSH82_039250	COG3263	regulation of cellular component size
AHGSH82_039300	COG1671	Belongs to the UPF0178 family
AHGSH82_039330	COG1988	membrane-bound metal-dependent
AHGSH82_039340	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AHGSH82_039350	COG0513	Belongs to the DEAD box helicase family
AHGSH82_039400	COG1575	Belongs to the MenA family. Type 1 subfamily
AHGSH82_039410	COG1169	isochorismate synthase
AHGSH82_039420	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
AHGSH82_039430	COG0596	Alpha beta hydrolase
AHGSH82_039440	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
AHGSH82_039450	COG1441	menaquinone biosynthetic process
AHGSH82_039460	COG0318	PFAM AMP-dependent synthetase and ligase
AHGSH82_039490	COG3539	Fimbrial protein
AHGSH82_039500	COG3121	Chaperone
AHGSH82_039510	COG3188	usher protein
AHGSH82_039530	COG3539	Fimbrial protein
AHGSH82_039550	COG3291	Pkd domain containing protein
AHGSH82_039560	COG2949	membrane
AHGSH82_039590	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
AHGSH82_039600	COG5380	lipid catabolic process
AHGSH82_039630	COG4533	DNA binding
AHGSH82_039650	COG2873	o-acetylhomoserine
AHGSH82_039670	COG1979	alcohol dehydrogenase
AHGSH82_039710	COG4221	oxidoreductase activity
AHGSH82_039750	COG1285	pathogenesis
AHGSH82_039790	COG1368	sulfuric ester hydrolase activity
AHGSH82_039800	COG1522	sequence-specific DNA binding
AHGSH82_039820	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
AHGSH82_039830	COG1418	mRNA catabolic process
AHGSH82_039840	COG1058	Belongs to the CinA family
AHGSH82_039840	COG1546	Belongs to the CinA family
AHGSH82_039870	COG0842	Transport permease protein
AHGSH82_039870	COG1129	ABC transporter
AHGSH82_039900	COG0561	phosphatase activity
AHGSH82_039910	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AHGSH82_039950	COG1011	Hydrolase
AHGSH82_039980	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AHGSH82_039990	COG0019	diaminopimelate decarboxylase activity
AHGSH82_040000	COG1965	Belongs to the frataxin family
AHGSH82_040010	COG0400	carboxylic ester hydrolase activity
AHGSH82_040020	COG3072	Adenylate cyclase
AHGSH82_040030	COG0181	hydroxymethylbilane synthase activity
AHGSH82_040050	COG2959	enzyme of heme biosynthesis
AHGSH82_040080	COG1494	fructose-1,6-bisphosphatase
AHGSH82_040170	COG1733	regulation of RNA biosynthetic process
AHGSH82_040210	COG3932	Exopolysaccharide synthesis, ExoD
AHGSH82_040220	COG0814	amino acid
AHGSH82_040240	COG3706	GGDEF domain
AHGSH82_040280	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
AHGSH82_040290	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AHGSH82_040310	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
AHGSH82_040320	COG2022	thiamine diphosphate biosynthetic process
AHGSH82_040340	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AHGSH82_040350	COG0352	thiamine-phosphate diphosphorylase activity
AHGSH82_040360	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
AHGSH82_040400	COG0745	RESPONSE REGULATOR receiver
AHGSH82_040420	COG1114	Component of the transport system for branched-chain amino acids
AHGSH82_040430	COG0189	ligase activity
AHGSH82_040480	COG1639	'signal transduction protein
AHGSH82_040500	COG2321	neutral zinc metallopeptidase
AHGSH82_040510	COG3700	Belongs to the class B bacterial acid phosphatase family
AHGSH82_040550	COG1366	Belongs to the anti-sigma-factor antagonist family
AHGSH82_040560	COG2172	sigma factor antagonist activity
AHGSH82_040570	COG2205	protein histidine kinase activity
AHGSH82_040570	COG5002	protein histidine kinase activity
AHGSH82_040570	COG0784	Response regulator, receiver
AHGSH82_040580	COG3437	response regulator, receiver
AHGSH82_040600	COG0477	Major facilitator Superfamily
AHGSH82_040630	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
AHGSH82_040640	COG1263	PTS System
AHGSH82_040640	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHGSH82_040680	COG0312	modulator of DNA gyrase
AHGSH82_040690	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AHGSH82_040710	COG3164	Protein of unknown function
AHGSH82_040720	COG1530	ribonuclease E activity
AHGSH82_040730	COG0424	maF-like protein
AHGSH82_040740	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
AHGSH82_040750	COG1792	Involved in formation and maintenance of cell shape
AHGSH82_040760	COG1077	Cell shape determining protein MreB Mrl
AHGSH82_040810	COG2165	general secretion pathway protein
AHGSH82_040860	COG1459	type II secretion system
AHGSH82_040870	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AHGSH82_040970	COG2199	diguanylate cyclase activity
AHGSH82_040970	COG2200	EAL domain
AHGSH82_040980	COG2200	EAL domain
AHGSH82_040990	COG0387	Pfam Sodium calcium exchanger
AHGSH82_041000	COG2986	histidine ammonia-lyase
AHGSH82_041010	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
AHGSH82_041020	COG0010	Belongs to the arginase family
AHGSH82_041030	COG1228	amidohydrolase
AHGSH82_041040	COG2188	Transcriptional regulator
AHGSH82_041050	COG0288	reversible hydration of carbon dioxide
AHGSH82_041070	COG2177	Part of the ABC transporter FtsEX involved in
AHGSH82_041080	COG2884	Cell division ATP-binding protein ftsE
AHGSH82_041090	COG0552	protein localization to endoplasmic reticulum
AHGSH82_041100	COG0742	ribosomal rna small subunit methyltransferase
AHGSH82_041160	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AHGSH82_041180	COG0741	lytic transglycosylase activity
AHGSH82_041230	COG2095	MarC family integral membrane protein
AHGSH82_041250	COG1301	dicarboxylic acid transport
AHGSH82_041300	COG3714	YhhN family
AHGSH82_041350	COG1770	oligopeptidase
AHGSH82_041380	COG4221	oxidoreductase activity
AHGSH82_041390	COG0583	DNA-binding transcription factor activity
AHGSH82_041400	COG2249	NAD(P)H dehydrogenase (quinone) activity
AHGSH82_041450	COG0203	ribosomal protein L17
AHGSH82_041460	COG0202	RNA polymerase activity
AHGSH82_041470	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AHGSH82_041480	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AHGSH82_041490	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AHGSH82_041500	COG0201	protein transport
AHGSH82_041510	COG0200	Binds to the 23S rRNA
AHGSH82_041520	COG1841	ribosomal large subunit assembly
AHGSH82_041530	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AHGSH82_041540	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AHGSH82_041550	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AHGSH82_041560	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AHGSH82_041570	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AHGSH82_041580	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AHGSH82_041590	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AHGSH82_041600	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AHGSH82_041610	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AHGSH82_041620	COG0255	Belongs to the universal ribosomal protein uL29 family
AHGSH82_041630	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AHGSH82_041640	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AHGSH82_041650	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AHGSH82_041660	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AHGSH82_041670	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AHGSH82_041680	COG0089	rRNA binding
AHGSH82_041690	COG0088	Forms part of the polypeptide exit tunnel
AHGSH82_041700	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AHGSH82_041710	COG0051	transcription antitermination factor activity, RNA binding
AHGSH82_041740	COG0745	RESPONSE REGULATOR receiver
AHGSH82_041750	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AHGSH82_041760	COG2183	response to ionizing radiation
AHGSH82_041800	COG0596	Alpha beta hydrolase
AHGSH82_041810	COG1040	competence protein
AHGSH82_041820	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
AHGSH82_041820	COG0316	Belongs to the HesB IscA family
AHGSH82_041830	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AHGSH82_041840	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
AHGSH82_041850	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AHGSH82_041860	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AHGSH82_041870	COG4942	peptidase
AHGSH82_041890	COG1609	Transcriptional regulator
AHGSH82_041900	COG0800	Aldolase
AHGSH82_041910	COG0129	dihydroxy-acid dehydratase activity
AHGSH82_041920	COG3265	gluconokinase activity
AHGSH82_041930	COG2610	gluconate transmembrane transporter activity
AHGSH82_041940	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AHGSH82_041950	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AHGSH82_041970	COG0456	acetyltransferase
AHGSH82_042000	COG1490	D-aminoacyl-tRNA deacylase activity
AHGSH82_042010	COG1295	ribonuclease BN
AHGSH82_042030	COG0174	glutamine synthetase
AHGSH82_042050	COG3852	Histidine kinase
AHGSH82_042060	COG2204	response regulator
AHGSH82_042070	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AHGSH82_042080	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AHGSH82_042100	COG3078	GTPase activator activity
AHGSH82_042130	COG0218	Necessary for normal cell division and for the maintenance of normal septation
AHGSH82_042150	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AHGSH82_042160	COG0408	coproporphyrinogen oxidase activity
AHGSH82_042170	COG0009	L-threonylcarbamoyladenylate synthase
AHGSH82_042190	COG0551	DNA topoisomerase type I activity
AHGSH82_042200	COG2922	Belongs to the Smg family
AHGSH82_042210	COG0758	DNA mediated transformation
AHGSH82_042230	COG0242	peptide deformylase activity
AHGSH82_042240	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AHGSH82_042250	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AHGSH82_042250	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AHGSH82_042260	COG0569	domain protein
AHGSH82_042270	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AHGSH82_042280	COG1322	Protein conserved in bacteria
AHGSH82_042320	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AHGSH82_042330	COG0686	Belongs to the AlaDH PNT family
AHGSH82_042340	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AHGSH82_042340	COG0519	Catalyzes the synthesis of GMP from XMP
AHGSH82_042370	COG1396	sequence-specific DNA binding
AHGSH82_042380	COG1012	belongs to the aldehyde dehydrogenase family
AHGSH82_042400	COG2962	Rard protein
AHGSH82_042420	COG1280	lysine exporter protein (LysE YggA)
AHGSH82_042440	COG0840	transmembrane signaling receptor activity
AHGSH82_042450	COG2391	methyltransferase activity
AHGSH82_042460	COG1280	lysine exporter protein (LysE YggA)
AHGSH82_042560	COG0583	DNA-binding transcription factor activity
AHGSH82_042590	COG0210	DNA helicase
AHGSH82_042650	COG0583	DNA-binding transcription factor activity
AHGSH82_042690	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AHGSH82_042700	COG0385	Bile acid
AHGSH82_042710	COG0531	amino acid
AHGSH82_042720	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AHGSH82_042730	COG0531	amino acid
AHGSH82_042740	COG2731	YhcH YjgK YiaL family protein
AHGSH82_042750	COG3250	beta-galactosidase activity
AHGSH82_042760	COG1609	Transcriptional regulator
AHGSH82_042770	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AHGSH82_042780	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AHGSH82_042780	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AHGSH82_042790	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
AHGSH82_042800	COG3074	FtsZ-dependent cytokinesis
AHGSH82_042820	COG1045	serine acetyltransferase
AHGSH82_042840	COG0745	RESPONSE REGULATOR receiver
AHGSH82_042850	COG2205	protein histidine kinase activity
AHGSH82_042860	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AHGSH82_042870	COG0534	Mate efflux family protein
AHGSH82_042900	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AHGSH82_042910	COG2937	Belongs to the GPAT DAPAT family
AHGSH82_042920	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
AHGSH82_042930	COG3161	chorismate lyase activity
AHGSH82_042940	COG1580	Controls the rotational direction of flagella during chemotaxis
AHGSH82_042980	COG0604	alcohol dehydrogenase
AHGSH82_042990	COG1609	Transcriptional regulator
AHGSH82_043030	COG1519	Transferase
AHGSH82_043040	COG0859	PFAM glycosyl transferase family 9
AHGSH82_043050	COG0463	Glycosyl transferase, family 2
AHGSH82_043060	COG0859	PFAM glycosyl transferase family 9
AHGSH82_043070	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AHGSH82_043080	COG2990	Protein conserved in bacteria
AHGSH82_043090	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AHGSH82_043110	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AHGSH82_043120	COG0227	Belongs to the bacterial ribosomal protein bL28 family
AHGSH82_043130	COG2003	Belongs to the UPF0758 family
AHGSH82_043140	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AHGSH82_043150	COG0756	dUTP diphosphatase activity
AHGSH82_043160	COG1309	transcriptional regulator
AHGSH82_043170	COG0668	transmembrane transport
AHGSH82_043190	COG0166	Belongs to the GPI family
AHGSH82_043200	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
AHGSH82_043210	COG0583	DNA-binding transcription factor activity
AHGSH82_043250	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
AHGSH82_043260	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AHGSH82_043270	COG1739	Uncharacterized protein family UPF0029
AHGSH82_043280	COG0006	proline dipeptidase activity
AHGSH82_043290	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AHGSH82_043300	COG1250	3-hydroxyacyl-CoA dehydrogenase
AHGSH82_043300	COG1024	Enoyl-CoA hydratase
AHGSH82_043310	COG0183	Belongs to the thiolase family
AHGSH82_043320	COG0745	RESPONSE REGULATOR receiver
AHGSH82_043330	COG2205	protein histidine kinase activity
AHGSH82_043360	COG0425	Belongs to the sulfur carrier protein TusA family
AHGSH82_043370	COG0251	oxidation-reduction process
AHGSH82_043380	COG2885	chlorophyll binding
AHGSH82_043390	COG1335	isochorismatase
AHGSH82_043400	COG2818	Glycosylase
AHGSH82_043410	COG0752	glycyl-tRNA synthetase alpha subunit
AHGSH82_043420	COG0751	glycine-tRNA ligase activity
AHGSH82_043440	COG5433	transposase activity
AHGSH82_043460	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AHGSH82_043490	COG0814	amino acid
AHGSH82_043500	COG0348	domain, Protein
AHGSH82_043520	COG0446	pyridine nucleotide-disulphide oxidoreductase
AHGSH82_043530	COG1773	rubredoxin
AHGSH82_043530	COG0426	domain, Protein
AHGSH82_043540	COG3604	Transcriptional regulator
AHGSH82_043550	COG1609	Transcriptional regulator
AHGSH82_043570	COG0559	Belongs to the binding-protein-dependent transport system permease family
AHGSH82_043630	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AHGSH82_043680	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AHGSH82_043700	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AHGSH82_043710	COG3118	belongs to the thioredoxin family
AHGSH82_043720	COG0513	Belongs to the DEAD box helicase family
AHGSH82_043730	COG0248	Ppx GppA phosphatase
AHGSH82_043760	COG0742	ribosomal rna small subunit methyltransferase
AHGSH82_043800	COG0084	hydrolase, TatD family'
AHGSH82_043810	COG0805	protein transport
AHGSH82_043820	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AHGSH82_043840	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AHGSH82_043850	COG3165	ubiquinone biosynthetic process from chorismate
AHGSH82_043870	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AHGSH82_043880	COG0402	S-adenosylhomocysteine deaminase activity
AHGSH82_043910	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
AHGSH82_043920	COG0848	biopolymer transport protein
AHGSH82_043930	COG0811	peptide transport
AHGSH82_043940	COG0811	peptide transport
AHGSH82_043960	COG2771	luxR family
AHGSH82_043970	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AHGSH82_043980	COG1349	DNA-binding transcription factor activity
AHGSH82_043990	COG0745	RESPONSE REGULATOR receiver
AHGSH82_044000	COG2205	protein histidine kinase activity
AHGSH82_044020	COG4452	Inner membrane protein CreD
AHGSH82_044030	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AHGSH82_044040	COG0355	proton-transporting ATP synthase activity, rotational mechanism
AHGSH82_044050	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AHGSH82_044060	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AHGSH82_044070	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AHGSH82_044080	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AHGSH82_044090	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AHGSH82_044110	COG0356	it plays a direct role in the translocation of protons across the membrane
AHGSH82_044130	COG1475	DNA binding
AHGSH82_044140	COG1192	Involved in chromosome partitioning
AHGSH82_044150	COG0357	Ribosomal RNA small subunit methyltransferase G
AHGSH82_044160	COG0445	tRNA wobble uridine modification
AHGSH82_044170	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AHGSH82_044180	COG4774	siderophore transport
AHGSH82_044190	COG4615	Cyclic peptide transporter
AHGSH82_044200	COG1120	ATPase activity
AHGSH82_044240	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AHGSH82_044250	COG0706	membrane insertase activity
AHGSH82_044260	COG0594	ribonuclease P activity
AHGSH82_044270	COG0230	Belongs to the bacterial ribosomal protein bL34 family
AHGSH82_p10080	COG2608	mercury ion transmembrane transporter activity
AHGSH82_p10140	COG5002	protein histidine kinase activity
AHGSH82_p10140	COG2176	DNA-directed DNA polymerase activity
AHGSH82_p10350	COG3385	transposase activity
AHGSH82_p10410	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AHGSH82_p10420	COG0625	glutathione transferase activity
AHGSH82_p10470	COG1192	Involved in chromosome partitioning