A9258_00005 SM00382 ATPases associated with a variety of cellular activities A9258_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain A9258_00010 SM00480 DNA polymerase III beta subunit A9258_00020 SM00387 Histidine kinase-like ATPases A9258_00020 SM00433 TopoisomeraseII A9258_00055 SM00342 helix_turn_helix, arabinose operon control protein A9258_00065 SM00448 cheY-homologous receiver domain A9258_00065 SM00862 Transcriptional regulatory protein, C terminal A9258_00070 SM00387 Histidine kinase-like ATPases A9258_00070 SM00388 His Kinase A (phosphoacceptor) domain A9258_00095 SM00530 Helix-turn-helix XRE-family like proteins A9258_00145 SM00091 PAS domain A9258_00145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_00145 SM00387 Histidine kinase-like ATPases A9258_00185 SM00458 Ricin-type beta-trefoil A9258_00205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_00205 SM00387 Histidine kinase-like ATPases A9258_00205 SM00388 His Kinase A (phosphoacceptor) domain A9258_00210 SM00448 cheY-homologous receiver domain A9258_00240 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9258_00240 SM00954 Region found in RelA / SpoT proteins A9258_00245 SM01409 A9258_00245 A9258_00250 SM00072 Guanylate kinase homologues. A9258_00265 SM00267 diguanylate cyclase A9258_00305 SM00267 diguanylate cyclase A9258_00355 SM00421 helix_turn_helix, Lux Regulon A9258_00355 SM00448 cheY-homologous receiver domain A9258_00360 SM00062 Bacterial periplasmic substrate-binding proteins A9258_00360 SM00387 Histidine kinase-like ATPases A9258_00360 SM00388 His Kinase A (phosphoacceptor) domain A9258_00360 SM00448 cheY-homologous receiver domain A9258_00370 SM00387 Histidine kinase-like ATPases A9258_00375 SM00448 cheY-homologous receiver domain A9258_00375 SM00850 LytTr DNA-binding domain A9258_00390 SM01001 AIR carboxylase A9258_00420 SM00360 RNA recognition motif A9258_00470 SM00052 Putative diguanylate phosphodiesterase A9258_00470 SM00267 diguanylate cyclase A9258_00480 SM00829 Enoylreductase A9258_00550 SM00422 helix_turn_helix, mercury resistance A9258_00555 SM00267 diguanylate cyclase A9258_00585 SM00382 ATPases associated with a variety of cellular activities A9258_00590 SM00062 Bacterial periplasmic substrate-binding proteins A9258_00615 SM00563 Phosphate acyltransferases A9258_00620 SM00563 Phosphate acyltransferases A9258_00625 SM00382 ATPases associated with a variety of cellular activities A9258_00665 SM00487 DEAD-like helicases superfamily A9258_00665 SM00490 helicase superfamily c-terminal domain A9258_00680 SM00919 Malic enzyme, NAD binding domain A9258_00680 SM01274 A9258_00680 A9258_00690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_00690 SM00387 Histidine kinase-like ATPases A9258_00690 SM00388 His Kinase A (phosphoacceptor) domain A9258_00695 SM00448 cheY-homologous receiver domain A9258_00695 SM00862 Transcriptional regulatory protein, C terminal A9258_00715 SM00642 Alpha-amylase domain A9258_00760 SM01230 A9258_00760 A9258_00780 SM00382 ATPases associated with a variety of cellular activities A9258_00820 SM00341 Helicase and RNase D C-terminal A9258_00820 SM00487 DEAD-like helicases superfamily A9258_00820 SM00490 helicase superfamily c-terminal domain A9258_00820 SM00956 A9258_00820 A9258_00850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_00850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_00850 SM01358 A9258_00850 A9258_00855 SM00924 MgtE intracellular N domain A9258_00890 SM00382 ATPases associated with a variety of cellular activities A9258_00890 SM01086 C-terminal, D2-small domain, of ClpB protein A9258_00905 SM00836 DALR anticodon binding domain A9258_00905 SM01016 Arginyl tRNA synthetase N terminal dom A9258_00910 SM00464 Found in ATP-dependent protease La (LON) A9258_00955 SM00354 helix_turn _helix lactose operon repressor A9258_00960 SM01038 Beta galactosidase small chain A9258_00970 SM00382 ATPases associated with a variety of cellular activities A9258_00980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_00980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_01045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_01045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_01055 SM00342 helix_turn_helix, arabinose operon control protein A9258_01065 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A9258_01065 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A9258_01105 SM00363 S4 RNA-binding domain A9258_01115 SM00382 ATPases associated with a variety of cellular activities A9258_01115 SM01086 C-terminal, D2-small domain, of ClpB protein A9258_01120 SM00849 Metallo-beta-lactamase superfamily A9258_01130 SM00344 helix_turn_helix ASNC type A9258_01135 SM00062 Bacterial periplasmic substrate-binding proteins A9258_01145 SM00116 Domain in cystathionine beta-synthase and other proteins. A9258_01160 SM00387 Histidine kinase-like ATPases A9258_01160 SM00388 His Kinase A (phosphoacceptor) domain A9258_01170 SM00382 ATPases associated with a variety of cellular activities A9258_01170 SM00448 cheY-homologous receiver domain A9258_01200 SM00448 cheY-homologous receiver domain A9258_01200 SM00862 Transcriptional regulatory protein, C terminal A9258_01205 SM00387 Histidine kinase-like ATPases A9258_01225 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A9258_01225 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A9258_01225 SM00493 A9258_01225 A9258_01240 SM00342 helix_turn_helix, arabinose operon control protein A9258_01295 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A9258_01295 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A9258_01300 SM00649 Ribosomal protein L11/L12 A9258_01325 SM00663 RNA polymerase I subunit A N-terminus A9258_01330 SM01126 A9258_01330 A9258_01370 SM00838 Elongation factor G C-terminus A9258_01370 SM00889 Elongation factor G, domain IV A9258_01425 SM01120 A9258_01425 A9258_01440 SM00091 PAS domain A9258_01455 SM00822 A9258_01455 A9258_01465 SM00014 Acid phosphatase homologues A9258_01490 SM01060 A9258_01490 A9258_01500 SM00342 helix_turn_helix, arabinose operon control protein A9258_01500 SM00871 Bacterial transcription activator, effector binding domain A9258_01515 SM00267 diguanylate cyclase A9258_01525 SM00382 ATPases associated with a variety of cellular activities A9258_01550 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9258_01550 SM00866 A9258_01550 A9258_01555 SM00530 Helix-turn-helix XRE-family like proteins A9258_01610 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A9258_01610 SM00091 PAS domain A9258_01610 SM00267 diguanylate cyclase A9258_01635 SM00448 cheY-homologous receiver domain A9258_01635 SM00862 Transcriptional regulatory protein, C terminal A9258_01640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_01640 SM00387 Histidine kinase-like ATPases A9258_01640 SM00388 His Kinase A (phosphoacceptor) domain A9258_01645 SM00062 Bacterial periplasmic substrate-binding proteins A9258_01645 SM00267 diguanylate cyclase A9258_01655 SM00357 Cold shock protein domain A9258_01670 SM00062 Bacterial periplasmic substrate-binding proteins A9258_01680 SM00421 helix_turn_helix, Lux Regulon A9258_01700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_01700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_01730 SM00530 Helix-turn-helix XRE-family like proteins A9258_01810 SM00382 ATPases associated with a variety of cellular activities A9258_01815 SM00116 Domain in cystathionine beta-synthase and other proteins. A9258_01835 SM00382 ATPases associated with a variety of cellular activities A9258_01910 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A9258_01915 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A9258_01965 SM00749 bacterial OsmY and nodulation domain A9258_02055 SM00842 Cell division protein FtsA A9258_02060 SM00864 Tubulin/FtsZ family, GTPase domain A9258_02060 SM00865 Tubulin/FtsZ family, C-terminal domain A9258_02075 SM00957 SecA DEAD-like domain A9258_02075 SM00958 SecA preprotein cross-linking domain A9258_02140 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9258_02140 SM00895 A9258_02140 A9258_02160 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A9258_02160 SM00267 diguanylate cyclase A9258_02170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_02175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_02175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_02210 SM00833 Cobalamin synthesis protein cobW C-terminal domain A9258_02230 SM00905 Dihydroneopterin aldolase A9258_02235 SM01207 A9258_02235 A9258_02280 SM00260 Two component signalling adaptor domain A9258_02280 SM00448 cheY-homologous receiver domain A9258_02315 SM00851 MGS-like domain A9258_02330 SM00870 A9258_02330 A9258_02345 SM00354 helix_turn _helix lactose operon repressor A9258_02355 SM00642 Alpha-amylase domain A9258_02360 SM01266 A9258_02360 A9258_02365 SM00344 helix_turn_helix ASNC type A9258_02395 SM00382 ATPases associated with a variety of cellular activities A9258_02465 SM01130 A9258_02465 A9258_02470 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A9258_02470 SM00267 diguanylate cyclase A9258_02510 SM00062 Bacterial periplasmic substrate-binding proteins A9258_02535 SM00478 endonuclease III A9258_02535 SM00525 A9258_02535 A9258_02545 SM00382 ATPases associated with a variety of cellular activities A9258_02555 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9258_02585 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9258_02595 SM00450 Rhodanese Homology Domain A9258_02620 SM01118 A9258_02620 A9258_02690 SM00387 Histidine kinase-like ATPases A9258_02690 SM00433 TopoisomeraseII A9258_02695 SM00434 DNA Topoisomerase IV A9258_02730 SM00271 DnaJ molecular chaperone homology domain A9258_02760 SM00563 Phosphate acyltransferases A9258_02795 SM00986 Uracil DNA glycosylase superfamily A9258_02795 SM00987 UreE urease accessory protein, C-terminal domain A9258_02815 SM00382 ATPases associated with a variety of cellular activities A9258_02855 SM00347 helix_turn_helix multiple antibiotic resistance protein A9258_02870 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A9258_02870 SM00534 ATPase domain of DNA mismatch repair MUTS family A9258_02900 SM00382 ATPases associated with a variety of cellular activities A9258_02910 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A9258_02965 SM01091 Transporter associated domain A9258_03075 SM01133 A9258_03075 A9258_03080 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain A9258_03095 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A9258_03095 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A9258_03095 SM00091 PAS domain A9258_03095 SM00267 diguanylate cyclase A9258_03120 SM00382 ATPases associated with a variety of cellular activities A9258_03135 SM00411 bacterial (prokaryotic) histone like domain A9258_03180 SM00487 DEAD-like helicases superfamily A9258_03180 SM00490 helicase superfamily c-terminal domain A9258_03195 SM00382 ATPases associated with a variety of cellular activities A9258_03215 SM01152 A9258_03215 A9258_03275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_03275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_03280 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A9258_03285 SM00382 ATPases associated with a variety of cellular activities A9258_03375 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_03375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_03390 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A9258_03400 SM00642 Alpha-amylase domain A9258_03405 SM00642 Alpha-amylase domain A9258_03425 SM00829 Enoylreductase A9258_03435 SM00347 helix_turn_helix multiple antibiotic resistance protein A9258_03450 SM00344 helix_turn_helix ASNC type A9258_03515 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9258_03615 SM00382 ATPases associated with a variety of cellular activities A9258_03620 SM00116 Domain in cystathionine beta-synthase and other proteins. A9258_03630 SM00244 prohibitin homologues A9258_03675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_03695 SM00382 ATPases associated with a variety of cellular activities A9258_03750 SM00382 ATPases associated with a variety of cellular activities A9258_03780 SM00450 Rhodanese Homology Domain A9258_03825 SM00487 DEAD-like helicases superfamily A9258_03825 SM00490 helicase superfamily c-terminal domain A9258_03825 SM00847 Helicase associated domain (HA2) Add an annotation A9258_03855 SM00448 cheY-homologous receiver domain A9258_03855 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9258_03865 SM00014 Acid phosphatase homologues A9258_03960 SM00382 ATPases associated with a variety of cellular activities A9258_03970 SM00448 cheY-homologous receiver domain A9258_03985 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A9258_04020 SM00327 von Willebrand factor (vWF) type A domain A9258_04025 SM00260 Two component signalling adaptor domain A9258_04025 SM00448 cheY-homologous receiver domain A9258_04035 SM00382 ATPases associated with a variety of cellular activities A9258_04050 SM00052 Putative diguanylate phosphodiesterase A9258_04080 SM00450 Rhodanese Homology Domain A9258_04095 SM00382 ATPases associated with a variety of cellular activities A9258_04125 SM00052 Putative diguanylate phosphodiesterase A9258_04125 SM00091 PAS domain A9258_04125 SM00267 diguanylate cyclase A9258_04160 SM00479 A9258_04160 A9258_04200 SM00357 Cold shock protein domain A9258_04210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_04210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_04255 SM00495 Chitin-binding domain type 3 A9258_04255 SM00636 A9258_04255 A9258_04260 SM00028 Tetratricopeptide repeats A9258_04310 SM00382 ATPases associated with a variety of cellular activities A9258_04315 SM00382 ATPases associated with a variety of cellular activities A9258_04340 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A9258_04370 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A9258_04380 SM01012 A9258_04380 A9258_04395 SM00382 ATPases associated with a variety of cellular activities A9258_04420 SM01057 Eukaryotic-type carbonic anhydrase A9258_04430 SM00477 DNA/RNA non-specific endonuclease A9258_04430 SM00892 DNA/RNA non-specific endonuclease A9258_04455 SM00563 Phosphate acyltransferases A9258_04515 SM00825 Beta-ketoacyl synthase A9258_04525 SM00822 A9258_04525 A9258_04530 SM00825 Beta-ketoacyl synthase A9258_04540 SM00852 Probable molybdopterin binding domain A9258_04565 SM00382 ATPases associated with a variety of cellular activities A9258_04605 SM00937 A9258_04605 A9258_04610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_04610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_04620 SM00870 A9258_04620 A9258_04630 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A9258_04660 SM01266 A9258_04660 A9258_04675 SM00829 Enoylreductase A9258_04700 SM00878 Biotin carboxylase C-terminal domain A9258_04725 SM00052 Putative diguanylate phosphodiesterase A9258_04725 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A9258_04725 SM00091 PAS domain A9258_04725 SM00267 diguanylate cyclase A9258_04795 SM00020 Trypsin-like serine protease A9258_04820 SM00382 ATPases associated with a variety of cellular activities A9258_04840 SM00861 Transketolase, pyrimidine binding domain A9258_04875 SM01103 A9258_04875 A9258_04885 SM00382 ATPases associated with a variety of cellular activities A9258_04925 SM00316 Ribosomal protein S1-like RNA-binding domain A9258_04945 SM01387 A9258_04945 A9258_04950 SM00316 Ribosomal protein S1-like RNA-binding domain A9258_04950 SM00322 K homology RNA-binding domain A9258_04960 SM00267 diguanylate cyclase A9258_04990 SM00448 cheY-homologous receiver domain A9258_04990 SM00850 LytTr DNA-binding domain A9258_05000 SM00421 helix_turn_helix, Lux Regulon A9258_05000 SM00448 cheY-homologous receiver domain A9258_05015 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A9258_05090 SM00422 helix_turn_helix, mercury resistance A9258_05120 SM00729 Elongator protein 3, MiaB family, Radical SAM A9258_05135 SM00936 Penicillin-binding protein 5, C-terminal domain A9258_05200 SM00116 Domain in cystathionine beta-synthase and other proteins. A9258_05200 SM01091 Transporter associated domain A9258_05215 SM00729 Elongator protein 3, MiaB family, Radical SAM A9258_05230 SM00357 Cold shock protein domain A9258_05235 SM00267 diguanylate cyclase A9258_05260 SM00267 diguanylate cyclase A9258_05285 SM00841 Elongation factor P, C-terminal A9258_05285 SM01185 A9258_05285 A9258_05295 SM01240 A9258_05295 A9258_05305 SM00387 Histidine kinase-like ATPases A9258_05305 SM00388 His Kinase A (phosphoacceptor) domain A9258_05310 SM00448 cheY-homologous receiver domain A9258_05310 SM00862 Transcriptional regulatory protein, C terminal A9258_05320 SM00822 A9258_05320 A9258_05325 SM01236 A9258_05325 A9258_05385 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_05385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_05425 SM00849 Metallo-beta-lactamase superfamily A9258_05435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_05435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_05450 SM00842 Cell division protein FtsA A9258_05470 SM00965 Secretin and TonB N terminus short domain A9258_05535 SM01150 A9258_05535 A9258_05550 SM00890 Domain of unknown function A9258_05560 SM00642 Alpha-amylase domain A9258_05570 SM01022 A9258_05570 A9258_05575 SM00100 Cyclic nucleotide-monophosphate binding domain A9258_05680 SM01400 A9258_05680 A9258_05705 SM00937 A9258_05705 A9258_05740 SM00986 Uracil DNA glycosylase superfamily A9258_05740 SM00987 UreE urease accessory protein, C-terminal domain A9258_05765 SM00460 Transglutaminase/protease-like homologues A9258_05790 SM00732 Likely ribonuclease with RNase H fold. A9258_05800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_05820 SM00731 SprT homologues. A9258_05830 SM00861 Transketolase, pyrimidine binding domain A9258_05840 SM00052 Putative diguanylate phosphodiesterase A9258_05875 SM00363 S4 RNA-binding domain A9258_05885 SM00342 helix_turn_helix, arabinose operon control protein A9258_05895 SM00788 Adenylosuccinate synthetase A9258_05940 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A9258_05940 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A9258_05940 SM00493 A9258_05940 A9258_05955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_05975 SM00382 ATPases associated with a variety of cellular activities A9258_05980 SM00382 ATPases associated with a variety of cellular activities A9258_06000 SM00091 PAS domain A9258_06000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_06000 SM00387 Histidine kinase-like ATPases A9258_06000 SM00388 His Kinase A (phosphoacceptor) domain A9258_06000 SM00448 cheY-homologous receiver domain A9258_06050 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A9258_06050 SM00091 PAS domain A9258_06050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_06060 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9258_06070 SM00852 Probable molybdopterin binding domain A9258_06080 SM00382 ATPases associated with a variety of cellular activities A9258_06095 SM00382 ATPases associated with a variety of cellular activities A9258_06095 SM00448 cheY-homologous receiver domain A9258_06100 SM00387 Histidine kinase-like ATPases A9258_06100 SM00388 His Kinase A (phosphoacceptor) domain A9258_06145 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A9258_06160 SM00387 Histidine kinase-like ATPases A9258_06160 SM00448 cheY-homologous receiver domain A9258_06165 SM00919 Malic enzyme, NAD binding domain A9258_06165 SM01274 A9258_06165 A9258_06195 SM00857 Resolvase, N terminal domain A9258_06295 SM00267 diguanylate cyclase A9258_06320 SM00382 ATPases associated with a variety of cellular activities A9258_06355 SM00382 ATPases associated with a variety of cellular activities A9258_06360 SM00382 ATPases associated with a variety of cellular activities A9258_06375 SM00448 cheY-homologous receiver domain A9258_06375 SM00862 Transcriptional regulatory protein, C terminal A9258_06440 SM00382 ATPases associated with a variety of cellular activities A9258_06465 SM00062 Bacterial periplasmic substrate-binding proteins A9258_06465 SM00387 Histidine kinase-like ATPases A9258_06465 SM00388 His Kinase A (phosphoacceptor) domain A9258_06465 SM00448 cheY-homologous receiver domain A9258_06465 SM00918 Ligated ion channel L-glutamate- and glycine-binding site A9258_06515 SM00530 Helix-turn-helix XRE-family like proteins A9258_06535 SM00528 Domain in histone-like proteins of HNS family A9258_06560 SM00382 ATPases associated with a variety of cellular activities A9258_06575 SM01131 A9258_06575 A9258_06605 SM00271 DnaJ molecular chaperone homology domain A9258_06625 SM00640 Glycosyl hydrolases family 32 A9258_06630 SM00354 helix_turn _helix lactose operon repressor A9258_06650 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A9258_06675 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A9258_06675 SM00091 PAS domain A9258_06675 SM00267 diguanylate cyclase A9258_06735 SM00028 Tetratricopeptide repeats A9258_06735 SM00448 cheY-homologous receiver domain A9258_06830 SM00382 ATPases associated with a variety of cellular activities A9258_06835 SM00062 Bacterial periplasmic substrate-binding proteins A9258_06855 SM00247 Beta/gamma crystallins A9258_06900 SM00481 DNA polymerase alpha chain like domain A9258_06920 SM00363 S4 RNA-binding domain A9258_06985 SM00382 ATPases associated with a variety of cellular activities A9258_07030 SM00984 UDP binding domain A9258_07110 SM00487 DEAD-like helicases superfamily A9258_07110 SM00490 helicase superfamily c-terminal domain A9258_07135 SM00861 Transketolase, pyrimidine binding domain A9258_07145 SM00357 Cold shock protein domain A9258_07180 SM00420 helix_turn_helix, Deoxyribose operon repressor A9258_07180 SM01134 A9258_07180 A9258_07205 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9258_07210 SM00363 S4 RNA-binding domain A9258_07240 SM00858 A9258_07240 A9258_07245 SM00260 Two component signalling adaptor domain A9258_07245 SM00448 cheY-homologous receiver domain A9258_07250 SM00138 Methyltransferase, chemotaxis proteins A9258_07295 SM00047 Lysozyme subfamily 2 A9258_07310 SM00116 Domain in cystathionine beta-synthase and other proteins. A9258_07310 SM00924 MgtE intracellular N domain A9258_07335 SM00382 ATPases associated with a variety of cellular activities A9258_07340 SM00091 PAS domain A9258_07340 SM00387 Histidine kinase-like ATPases A9258_07340 SM00388 His Kinase A (phosphoacceptor) domain A9258_07345 SM00382 ATPases associated with a variety of cellular activities A9258_07345 SM00448 cheY-homologous receiver domain A9258_07410 SM00382 ATPases associated with a variety of cellular activities A9258_07420 SM01091 Transporter associated domain A9258_07450 SM00382 ATPases associated with a variety of cellular activities A9258_07460 SM00062 Bacterial periplasmic substrate-binding proteins A9258_07460 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A9258_07465 SM00267 diguanylate cyclase A9258_07475 SM00387 Histidine kinase-like ATPases A9258_07480 SM00421 helix_turn_helix, Lux Regulon A9258_07480 SM00448 cheY-homologous receiver domain A9258_07505 SM00098 Alkaline phosphatase homologues A9258_07510 SM00098 Alkaline phosphatase homologues A9258_07535 SM00491 A9258_07535 A9258_07615 SM00873 B3/4 domain A9258_07620 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9258_07625 SM01130 A9258_07625 A9258_07635 SM00344 helix_turn_helix ASNC type A9258_07665 SM00528 Domain in histone-like proteins of HNS family A9258_07700 SM00382 ATPases associated with a variety of cellular activities A9258_07720 SM00421 helix_turn_helix, Lux Regulon A9258_07720 SM00448 cheY-homologous receiver domain A9258_07725 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A9258_07725 SM00465 GIY-YIG type nucleases (URI domain) A9258_07805 SM00382 ATPases associated with a variety of cellular activities A9258_07940 SM00840 A9258_07940 A9258_07955 SM00267 diguanylate cyclase A9258_07960 SM00062 Bacterial periplasmic substrate-binding proteins A9258_07965 SM00062 Bacterial periplasmic substrate-binding proteins A9258_07995 SM00899 A9258_07995 A9258_08020 SM00382 ATPases associated with a variety of cellular activities A9258_08030 SM00062 Bacterial periplasmic substrate-binding proteins A9258_08040 SM00382 ATPases associated with a variety of cellular activities A9258_08085 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A9258_08090 SM00851 MGS-like domain A9258_08090 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A9258_08095 SM00917 LeuA allosteric (dimerisation) domain A9258_08115 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A9258_08130 SM00487 DEAD-like helicases superfamily A9258_08130 SM00490 helicase superfamily c-terminal domain A9258_08140 SM01351 A9258_08140 A9258_08155 SM00422 helix_turn_helix, mercury resistance A9258_08170 SM00062 Bacterial periplasmic substrate-binding proteins A9258_08180 SM00382 ATPases associated with a variety of cellular activities A9258_08195 SM00729 Elongator protein 3, MiaB family, Radical SAM A9258_08200 SM00382 ATPases associated with a variety of cellular activities A9258_08220 SM00052 Putative diguanylate phosphodiesterase A9258_08220 SM00267 diguanylate cyclase A9258_08235 SM00327 von Willebrand factor (vWF) type A domain A9258_08270 SM00342 helix_turn_helix, arabinose operon control protein A9258_08275 SM01217 A9258_08275 A9258_08300 SM00342 helix_turn_helix, arabinose operon control protein A9258_08300 SM00871 Bacterial transcription activator, effector binding domain A9258_08315 SM00014 Acid phosphatase homologues A9258_08325 SM00859 Semialdehyde dehydrogenase, NAD binding domain A9258_08405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_08410 SM00267 diguanylate cyclase A9258_08485 SM00116 Domain in cystathionine beta-synthase and other proteins. A9258_08485 SM01091 Transporter associated domain A9258_08510 SM00487 DEAD-like helicases superfamily A9258_08510 SM00490 helicase superfamily c-terminal domain A9258_08520 SM00479 A9258_08520 A9258_08525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_08540 SM00478 endonuclease III A9258_08540 SM00525 A9258_08540 A9258_08550 SM00900 A9258_08550 A9258_08585 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A9258_08585 SM00091 PAS domain A9258_08585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_08620 SM00487 DEAD-like helicases superfamily A9258_08620 SM00490 helicase superfamily c-terminal domain A9258_08640 SM00448 cheY-homologous receiver domain A9258_08640 SM00850 LytTr DNA-binding domain A9258_08645 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A9258_08650 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9258_08685 SM00382 ATPases associated with a variety of cellular activities A9258_08695 SM00382 ATPases associated with a variety of cellular activities A9258_08705 SM01005 Alanine racemase, C-terminal domain A9258_08740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_08740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_08980 SM00382 ATPases associated with a variety of cellular activities A9258_09095 SM00530 Helix-turn-helix XRE-family like proteins A9258_09100 SM00873 B3/4 domain A9258_09105 SM01005 Alanine racemase, C-terminal domain A9258_09110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_09110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_09115 SM00052 Putative diguanylate phosphodiesterase A9258_09115 SM00448 cheY-homologous receiver domain A9258_09120 SM00448 cheY-homologous receiver domain A9258_09125 SM00138 Methyltransferase, chemotaxis proteins A9258_09130 SM00260 Two component signalling adaptor domain A9258_09135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_09140 SM00073 Histidine Phosphotransfer domain A9258_09140 SM00260 Two component signalling adaptor domain A9258_09140 SM00387 Histidine kinase-like ATPases A9258_09140 SM01231 A9258_09140 A9258_09150 SM00448 cheY-homologous receiver domain A9258_09200 SM00382 ATPases associated with a variety of cellular activities A9258_09205 SM00382 ATPases associated with a variety of cellular activities A9258_09300 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A9258_09315 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A9258_09315 SM00382 ATPases associated with a variety of cellular activities A9258_09325 SM00493 A9258_09325 A9258_09330 SM00387 Histidine kinase-like ATPases A9258_09365 SM00052 Putative diguanylate phosphodiesterase A9258_09365 SM00267 diguanylate cyclase A9258_09400 SM00823 Phosphopantetheine attachment site A9258_09405 SM00822 A9258_09405 A9258_09410 SM00823 Phosphopantetheine attachment site A9258_09430 SM00382 ATPases associated with a variety of cellular activities A9258_09475 SM00893 Electron transfer flavoprotein domain A9258_09480 SM00893 Electron transfer flavoprotein domain A9258_09500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_09500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_09505 SM00729 Elongator protein 3, MiaB family, Radical SAM A9258_09540 SM00116 Domain in cystathionine beta-synthase and other proteins. A9258_09540 SM01240 A9258_09540 A9258_09590 SM00342 helix_turn_helix, arabinose operon control protein A9258_09600 SM00369 Leucine-rich repeats, typical (most populated) subfamily A9258_09615 SM00855 Phosphoglycerate mutase family A9258_09640 SM00487 DEAD-like helicases superfamily A9258_09640 SM00490 helicase superfamily c-terminal domain A9258_09640 SM00982 A9258_09640 A9258_09640 SM01058 CarD-like/TRCF domain A9258_09655 SM00382 ATPases associated with a variety of cellular activities A9258_09665 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9258_09685 SM00382 ATPases associated with a variety of cellular activities A9258_09685 SM00994 ClpX C4-type zinc finger A9258_09685 SM01086 C-terminal, D2-small domain, of ClpB protein A9258_09690 SM00382 ATPases associated with a variety of cellular activities A9258_09690 SM00464 Found in ATP-dependent protease La (LON) A9258_09705 SM00382 ATPases associated with a variety of cellular activities A9258_09720 SM00479 A9258_09720 A9258_09725 SM00100 Cyclic nucleotide-monophosphate binding domain A9258_09725 SM00116 Domain in cystathionine beta-synthase and other proteins. A9258_09790 SM00062 Bacterial periplasmic substrate-binding proteins A9258_09795 SM00422 helix_turn_helix, mercury resistance A9258_09805 SM00878 Biotin carboxylase C-terminal domain A9258_09805 SM01209 A9258_09805 A9258_09850 SM00822 A9258_09850 A9258_09875 SM00885 D5 N terminal like A9258_09885 SM00052 Putative diguanylate phosphodiesterase A9258_09885 SM00448 cheY-homologous receiver domain A9258_09890 SM00062 Bacterial periplasmic substrate-binding proteins A9258_09890 SM00073 Histidine Phosphotransfer domain A9258_09890 SM00387 Histidine kinase-like ATPases A9258_09890 SM00388 His Kinase A (phosphoacceptor) domain A9258_09890 SM00448 cheY-homologous receiver domain A9258_09905 SM00857 Resolvase, N terminal domain A9258_09935 SM00857 Resolvase, N terminal domain A9258_10000 SM00267 diguanylate cyclase A9258_10015 SM00052 Putative diguanylate phosphodiesterase A9258_10015 SM00267 diguanylate cyclase A9258_10025 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9258_10030 SM00822 A9258_10030 A9258_10040 SM00518 AP endonuclease family 2 A9258_10070 SM00090 RIO-like kinase A9258_10080 SM00267 diguanylate cyclase A9258_10090 SM00486 DNA polymerase type-B family A9258_10170 SM00347 helix_turn_helix multiple antibiotic resistance protein A9258_10250 SM00422 helix_turn_helix, mercury resistance A9258_10260 SM00052 Putative diguanylate phosphodiesterase A9258_10290 SM00028 Tetratricopeptide repeats A9258_10295 SM00327 von Willebrand factor (vWF) type A domain A9258_10330 SM01322 A9258_10330 A9258_10355 SM00382 ATPases associated with a variety of cellular activities A9258_10415 SM01092 CO dehydrogenase flavoprotein C-terminal domain A9258_10420 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A9258_10440 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A9258_10445 SM01092 CO dehydrogenase flavoprotein C-terminal domain A9258_10455 SM00237 Domains in Na-Ca exchangers and integrin-beta4 A9258_10490 SM00073 Histidine Phosphotransfer domain A9258_10490 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A9258_10490 SM00091 PAS domain A9258_10490 SM00387 Histidine kinase-like ATPases A9258_10490 SM00388 His Kinase A (phosphoacceptor) domain A9258_10490 SM00448 cheY-homologous receiver domain A9258_10495 SM00091 PAS domain A9258_10500 SM00448 cheY-homologous receiver domain A9258_10500 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9258_10540 SM00491 A9258_10540 A9258_10565 SM00341 Helicase and RNase D C-terminal A9258_10565 SM00474 3'-5' exonuclease A9258_10570 SM00062 Bacterial periplasmic substrate-binding proteins A9258_10670 SM00857 Resolvase, N terminal domain A9258_10705 SM00382 ATPases associated with a variety of cellular activities A9258_10720 SM00421 helix_turn_helix, Lux Regulon A9258_10725 SM00116 Domain in cystathionine beta-synthase and other proteins. A9258_10730 SM00382 ATPases associated with a variety of cellular activities A9258_10730 SM00487 DEAD-like helicases superfamily A9258_10730 SM00490 helicase superfamily c-terminal domain A9258_10730 SM00847 Helicase associated domain (HA2) Add an annotation A9258_10745 SM00387 Histidine kinase-like ATPases A9258_10745 SM00388 His Kinase A (phosphoacceptor) domain A9258_10745 SM00448 cheY-homologous receiver domain A9258_10750 SM00448 cheY-homologous receiver domain A9258_10750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9258_10755 SM00849 Metallo-beta-lactamase superfamily A9258_10760 SM00450 Rhodanese Homology Domain A9258_10785 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A9258_10790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_10830 SM00316 Ribosomal protein S1-like RNA-binding domain A9258_10835 SM00363 S4 RNA-binding domain A9258_10885 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A9258_10890 SM00822 A9258_10890 A9258_10900 SM00825 Beta-ketoacyl synthase A9258_10920 SM00382 ATPases associated with a variety of cellular activities A9258_11010 SM00822 A9258_11010 A9258_11045 SM00382 ATPases associated with a variety of cellular activities A9258_11055 SM00981 A9258_11055 A9258_11085 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A9258_11085 SM00245 tail specific protease A9258_11090 SM00945 ProQ/FINO family A9258_11145 SM00100 Cyclic nucleotide-monophosphate binding domain A9258_11145 SM00419 helix_turn_helix, cAMP Regulatory protein A9258_11180 SM00382 ATPases associated with a variety of cellular activities A9258_11200 SM00354 helix_turn _helix lactose operon repressor A9258_11230 SM00062 Bacterial periplasmic substrate-binding proteins A9258_11230 SM00387 Histidine kinase-like ATPases A9258_11230 SM00388 His Kinase A (phosphoacceptor) domain A9258_11230 SM00448 cheY-homologous receiver domain A9258_11235 SM00411 bacterial (prokaryotic) histone like domain A9258_11240 SM00873 B3/4 domain A9258_11240 SM00874 tRNA synthetase B5 domain A9258_11240 SM00896 Ferredoxin-fold anticodon binding domain A9258_11265 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A9258_11270 SM00671 Sel1-like repeats. A9258_11280 SM00434 DNA Topoisomerase IV A9258_11310 SM00925 MltA specific insert domain A9258_11350 SM00354 helix_turn _helix lactose operon repressor A9258_11375 SM00354 helix_turn _helix lactose operon repressor A9258_11390 SM00953 A9258_11390 A9258_11395 SM00487 DEAD-like helicases superfamily A9258_11395 SM00490 helicase superfamily c-terminal domain A9258_11400 SM00062 Bacterial periplasmic substrate-binding proteins A9258_11415 SM00463 Small MutS-related domain A9258_11425 SM00091 PAS domain A9258_11425 SM00267 diguanylate cyclase A9258_11430 SM00855 Phosphoglycerate mutase family A9258_11455 SM00782 PhnA Zinc-Ribbon A9258_11570 SM00642 Alpha-amylase domain A9258_11585 SM00342 helix_turn_helix, arabinose operon control protein A9258_11605 SM01144 A9258_11605 A9258_11620 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A9258_11630 SM00487 DEAD-like helicases superfamily A9258_11630 SM00490 helicase superfamily c-terminal domain A9258_11655 SM01118 A9258_11655 A9258_11720 SM00382 ATPases associated with a variety of cellular activities A9258_11725 SM00382 ATPases associated with a variety of cellular activities A9258_11730 SM00387 Histidine kinase-like ATPases A9258_11730 SM00388 His Kinase A (phosphoacceptor) domain A9258_11730 SM00448 cheY-homologous receiver domain A9258_11790 SM00487 DEAD-like helicases superfamily A9258_11790 SM00490 helicase superfamily c-terminal domain A9258_11795 SM00763 PrkA AAA domain A9258_11810 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9258_11835 SM00487 DEAD-like helicases superfamily A9258_11835 SM00490 helicase superfamily c-terminal domain A9258_11850 SM00062 Bacterial periplasmic substrate-binding proteins A9258_11870 SM00448 cheY-homologous receiver domain A9258_11875 SM00091 PAS domain A9258_11875 SM00387 Histidine kinase-like ATPases A9258_11885 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_11885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_11885 SM01049 A9258_11885 A9258_11990 SM00116 Domain in cystathionine beta-synthase and other proteins. A9258_12020 SM00342 helix_turn_helix, arabinose operon control protein A9258_12020 SM00871 Bacterial transcription activator, effector binding domain A9258_12025 SM00822 A9258_12025 A9258_12055 SM00859 Semialdehyde dehydrogenase, NAD binding domain A9258_12095 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9258_12095 SM00866 A9258_12095 A9258_12105 SM00382 ATPases associated with a variety of cellular activities A9258_12130 SM00881 CoA binding domain A9258_12145 SM00861 Transketolase, pyrimidine binding domain A9258_12185 SM00825 Beta-ketoacyl synthase A9258_12250 SM00342 helix_turn_helix, arabinose operon control protein A9258_12260 SM00382 ATPases associated with a variety of cellular activities A9258_12275 SM01007 Class II Aldolase and Adducin N-terminal domain A9258_12340 SM00267 diguanylate cyclase A9258_12340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_12350 SM00091 PAS domain A9258_12350 SM00382 ATPases associated with a variety of cellular activities A9258_12395 SM00382 ATPases associated with a variety of cellular activities A9258_12415 SM00382 ATPases associated with a variety of cellular activities A9258_12420 SM00382 ATPases associated with a variety of cellular activities A9258_12450 SM00382 ATPases associated with a variety of cellular activities A9258_12460 SM00843 A9258_12460 A9258_12465 SM00344 helix_turn_helix ASNC type A9258_12475 SM00267 diguanylate cyclase A9258_12475 SM00448 cheY-homologous receiver domain A9258_12495 SM00316 Ribosomal protein S1-like RNA-binding domain A9258_12500 SM00382 ATPases associated with a variety of cellular activities A9258_12500 SM01086 C-terminal, D2-small domain, of ClpB protein A9258_12510 SM00357 Cold shock protein domain A9258_12570 SM01154 A9258_12570 A9258_12585 SM00528 Domain in histone-like proteins of HNS family A9258_12610 SM01144 A9258_12610 A9258_12620 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A9258_12625 SM00028 Tetratricopeptide repeats A9258_12635 SM00411 bacterial (prokaryotic) histone like domain A9258_12640 SM00316 Ribosomal protein S1-like RNA-binding domain A9258_12685 SM00052 Putative diguanylate phosphodiesterase A9258_12685 SM00267 diguanylate cyclase A9258_12700 SM00448 cheY-homologous receiver domain A9258_12705 SM00091 PAS domain A9258_12730 SM00360 RNA recognition motif A9258_12795 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A9258_12800 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A9258_12800 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A9258_12840 SM01126 A9258_12840 A9258_12845 SM01211 A9258_12845 A9258_12850 SM00062 Bacterial periplasmic substrate-binding proteins A9258_12865 SM00564 beta-propeller repeat A9258_12885 SM00530 Helix-turn-helix XRE-family like proteins A9258_12890 SM00028 Tetratricopeptide repeats A9258_12900 SM00562 A9258_12900 A9258_12925 SM00271 DnaJ molecular chaperone homology domain A9258_12975 SM00028 Tetratricopeptide repeats A9258_12980 SM00450 Rhodanese Homology Domain A9258_12995 SM01323 A9258_12995 A9258_13010 SM00116 Domain in cystathionine beta-synthase and other proteins. A9258_13050 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A9258_13115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_13115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_13180 SM00858 A9258_13180 A9258_13250 SM00981 A9258_13250 A9258_13265 SM01359 A9258_13265 A9258_13265 SM01360 A9258_13265 A9258_13300 SM00450 Rhodanese Homology Domain A9258_13305 SM00052 Putative diguanylate phosphodiesterase A9258_13305 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A9258_13305 SM00091 PAS domain A9258_13305 SM00267 diguanylate cyclase A9258_13330 SM00062 Bacterial periplasmic substrate-binding proteins A9258_13330 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A9258_13335 SM00382 ATPases associated with a variety of cellular activities A9258_13405 SM00382 ATPases associated with a variety of cellular activities A9258_13480 SM00830 Chorismate mutase type II A9258_13500 SM00420 helix_turn_helix, Deoxyribose operon repressor A9258_13500 SM01134 A9258_13500 A9258_13565 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9258_13595 SM00871 Bacterial transcription activator, effector binding domain A9258_13620 SM00363 S4 RNA-binding domain A9258_13625 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A9258_13645 SM00487 DEAD-like helicases superfamily A9258_13645 SM00490 helicase superfamily c-terminal domain A9258_13650 SM00855 Phosphoglycerate mutase family A9258_13675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_13675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_13700 SM00563 Phosphate acyltransferases A9258_13710 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A9258_13720 SM00867 YceI-like domain A9258_13740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_13740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_13750 SM00852 Probable molybdopterin binding domain A9258_13765 SM00382 ATPases associated with a variety of cellular activities A9258_13795 SM00852 Probable molybdopterin binding domain A9258_13820 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A9258_13835 SM00729 Elongator protein 3, MiaB family, Radical SAM A9258_13840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_13840 SM00387 Histidine kinase-like ATPases A9258_13845 SM00421 helix_turn_helix, Lux Regulon A9258_13845 SM00448 cheY-homologous receiver domain A9258_13850 SM00464 Found in ATP-dependent protease La (LON) A9258_13855 SM00387 Histidine kinase-like ATPases A9258_13855 SM00388 His Kinase A (phosphoacceptor) domain A9258_13855 SM00448 cheY-homologous receiver domain A9258_13860 SM00897 FIST N domain A9258_13860 SM01204 A9258_13860 A9258_13870 SM00073 Histidine Phosphotransfer domain A9258_13890 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9258_13900 SM00479 A9258_13900 A9258_13915 SM00849 Metallo-beta-lactamase superfamily A9258_13920 SM00257 Lysin motif A9258_13945 SM00354 helix_turn _helix lactose operon repressor A9258_13955 SM00052 Putative diguanylate phosphodiesterase A9258_13955 SM00267 diguanylate cyclase A9258_14030 SM00382 ATPases associated with a variety of cellular activities A9258_14045 SM00347 helix_turn_helix multiple antibiotic resistance protein A9258_14100 SM01081 Putative carbohydrate binding domain A9258_14180 SM00458 Ricin-type beta-trefoil A9258_14255 SM00342 helix_turn_helix, arabinose operon control protein A9258_14265 SM00890 Domain of unknown function A9258_14280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_14305 SM00729 Elongator protein 3, MiaB family, Radical SAM A9258_14305 SM00876 Biotin and Thiamin Synthesis associated domain A9258_14315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_14375 SM01091 Transporter associated domain A9258_14400 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_14400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_14470 SM00382 ATPases associated with a variety of cellular activities A9258_14490 SM00858 A9258_14490 A9258_14520 SM00859 Semialdehyde dehydrogenase, NAD binding domain A9258_14615 SM00959 Rho termination factor, N-terminal domain A9258_14765 SM00487 DEAD-like helicases superfamily A9258_14820 SM01329 A9258_14820 A9258_14825 SM00342 helix_turn_helix, arabinose operon control protein A9258_14860 SM00354 helix_turn _helix lactose operon repressor A9258_14940 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. A9258_15040 SM00382 ATPases associated with a variety of cellular activities A9258_15050 SM00260 Two component signalling adaptor domain A9258_15055 SM00260 Two component signalling adaptor domain A9258_15075 SM00448 cheY-homologous receiver domain A9258_15080 SM00073 Histidine Phosphotransfer domain A9258_15080 SM00260 Two component signalling adaptor domain A9258_15080 SM00387 Histidine kinase-like ATPases A9258_15080 SM01231 A9258_15080 A9258_15090 SM00448 cheY-homologous receiver domain A9258_15105 SM00382 ATPases associated with a variety of cellular activities A9258_15105 SM00962 SRP54-type protein, GTPase domain A9258_15165 SM00382 ATPases associated with a variety of cellular activities A9258_15195 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9258_15200 SM00729 Elongator protein 3, MiaB family, Radical SAM A9258_15225 SM00382 ATPases associated with a variety of cellular activities A9258_15235 SM00382 ATPases associated with a variety of cellular activities A9258_15240 SM00448 cheY-homologous receiver domain A9258_15240 SM00862 Transcriptional regulatory protein, C terminal A9258_15245 SM00387 Histidine kinase-like ATPases A9258_15285 SM00481 DNA polymerase alpha chain like domain A9258_15310 SM00530 Helix-turn-helix XRE-family like proteins A9258_15385 SM00487 DEAD-like helicases superfamily A9258_15405 SM00487 DEAD-like helicases superfamily A9258_15405 SM00490 helicase superfamily c-terminal domain A9258_15445 SM00862 Transcriptional regulatory protein, C terminal A9258_15455 SM00877 A9258_15455 A9258_15460 SM00877 A9258_15460 A9258_15465 SM00877 A9258_15465 A9258_15495 SM00877 A9258_15495 A9258_15570 SM01130 A9258_15570 A9258_15580 SM01134 A9258_15580 A9258_15600 SM01007 Class II Aldolase and Adducin N-terminal domain A9258_15615 SM00382 ATPases associated with a variety of cellular activities A9258_15695 SM00155 Phospholipase D. Active site motifs. A9258_15715 SM00642 Alpha-amylase domain A9258_15760 SM00729 Elongator protein 3, MiaB family, Radical SAM A9258_15780 SM00267 diguanylate cyclase A9258_15795 SM00530 Helix-turn-helix XRE-family like proteins A9258_15820 SM00919 Malic enzyme, NAD binding domain A9258_15820 SM01274 A9258_15820 A9258_15825 SM00342 helix_turn_helix, arabinose operon control protein A9258_15840 SM00267 diguanylate cyclase A9258_15900 SM00382 ATPases associated with a variety of cellular activities A9258_15935 SM00387 Histidine kinase-like ATPases A9258_15935 SM00388 His Kinase A (phosphoacceptor) domain A9258_15940 SM00448 cheY-homologous receiver domain A9258_15940 SM00862 Transcriptional regulatory protein, C terminal A9258_15960 SM00382 ATPases associated with a variety of cellular activities A9258_15970 SM00342 helix_turn_helix, arabinose operon control protein A9258_15980 SM00448 cheY-homologous receiver domain A9258_15985 SM00387 Histidine kinase-like ATPases A9258_15990 SM00919 Malic enzyme, NAD binding domain A9258_15990 SM01274 A9258_15990 A9258_16000 SM00347 helix_turn_helix multiple antibiotic resistance protein A9258_16015 SM00062 Bacterial periplasmic substrate-binding proteins A9258_16050 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A9258_16050 SM00292 breast cancer carboxy-terminal domain A9258_16050 SM00532 Ligase N family A9258_16055 SM00771 ZipA, C-terminal domain (FtsZ-binding) A9258_16090 SM00062 Bacterial periplasmic substrate-binding proteins A9258_16115 SM00642 Alpha-amylase domain A9258_16125 SM00421 helix_turn_helix, Lux Regulon A9258_16125 SM00448 cheY-homologous receiver domain A9258_16150 SM00267 diguanylate cyclase A9258_16155 SM00977 TilS substrate C-terminal domain A9258_16170 SM00382 ATPases associated with a variety of cellular activities A9258_16190 SM00849 Metallo-beta-lactamase superfamily A9258_16225 SM00862 Transcriptional regulatory protein, C terminal A9258_16235 SM00481 DNA polymerase alpha chain like domain A9258_16265 SM00935 Outer membrane protein (OmpH-like) A9258_16275 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A9258_16320 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9258_16400 SM00028 Tetratricopeptide repeats A9258_16405 SM00267 diguanylate cyclase A9258_16415 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A9258_16415 SM00475 5'-3' exonuclease A9258_16420 SM01329 A9258_16420 A9258_16450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_16450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_16490 SM00900 A9258_16490 A9258_16595 SM00421 helix_turn_helix, Lux Regulon A9258_16680 SM00422 helix_turn_helix, mercury resistance A9258_16715 SM00830 Chorismate mutase type II A9258_16755 SM00530 Helix-turn-helix XRE-family like proteins A9258_16830 SM00487 DEAD-like helicases superfamily A9258_16830 SM00490 helicase superfamily c-terminal domain A9258_16850 SM00487 DEAD-like helicases superfamily A9258_16850 SM00490 helicase superfamily c-terminal domain A9258_16855 SM00487 DEAD-like helicases superfamily A9258_16875 SM00342 helix_turn_helix, arabinose operon control protein A9258_16915 SM00100 Cyclic nucleotide-monophosphate binding domain A9258_16915 SM00419 helix_turn_helix, cAMP Regulatory protein A9258_16930 SM00382 ATPases associated with a variety of cellular activities A9258_16975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_16975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_17005 SM00463 Small MutS-related domain A9258_17050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_17055 SM00448 cheY-homologous receiver domain A9258_17065 SM00073 Histidine Phosphotransfer domain A9258_17065 SM00260 Two component signalling adaptor domain A9258_17065 SM00387 Histidine kinase-like ATPases A9258_17065 SM01231 A9258_17065 A9258_17070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_17070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_17075 SM00260 Two component signalling adaptor domain A9258_17080 SM00091 PAS domain A9258_17080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_17080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_17085 SM00138 Methyltransferase, chemotaxis proteins A9258_17095 SM00448 cheY-homologous receiver domain A9258_17130 SM00052 Putative diguanylate phosphodiesterase A9258_17145 SM01005 Alanine racemase, C-terminal domain A9258_17150 SM00382 ATPases associated with a variety of cellular activities A9258_17155 SM00978 A9258_17155 A9258_17160 SM00052 Putative diguanylate phosphodiesterase A9258_17185 SM00382 ATPases associated with a variety of cellular activities A9258_17185 SM00448 cheY-homologous receiver domain A9258_17195 SM00320 WD40 repeats A9258_17220 SM00260 Two component signalling adaptor domain A9258_17220 SM00448 cheY-homologous receiver domain A9258_17230 SM00267 diguanylate cyclase A9258_17240 SM00984 UDP binding domain A9258_17300 SM00100 Cyclic nucleotide-monophosphate binding domain A9258_17300 SM00419 helix_turn_helix, cAMP Regulatory protein A9258_17310 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins A9258_17310 SM00495 Chitin-binding domain type 3 A9258_17325 SM00387 Histidine kinase-like ATPases A9258_17325 SM00388 His Kinase A (phosphoacceptor) domain A9258_17325 SM00448 cheY-homologous receiver domain A9258_17335 SM00530 Helix-turn-helix XRE-family like proteins A9258_17385 SM00382 ATPases associated with a variety of cellular activities A9258_17405 SM01133 A9258_17405 A9258_17455 SM00382 ATPases associated with a variety of cellular activities A9258_17470 SM00271 DnaJ molecular chaperone homology domain A9258_17500 SM00650 Ribosomal RNA adenine dimethylases A9258_17515 SM00530 Helix-turn-helix XRE-family like proteins A9258_17525 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9258_17575 SM00244 prohibitin homologues A9258_17580 SM00244 prohibitin homologues A9258_17600 SM00853 MutL C terminal dimerisation domain A9258_17600 SM01340 A9258_17600 A9258_17605 SM00257 Lysin motif A9258_17605 SM00646 A9258_17605 A9258_17640 SM00382 ATPases associated with a variety of cellular activities A9258_17640 SM00930 A9258_17640 A9258_17655 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A9258_17660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_17660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_17665 SM00052 Putative diguanylate phosphodiesterase A9258_17665 SM00448 cheY-homologous receiver domain A9258_17670 SM00062 Bacterial periplasmic substrate-binding proteins A9258_17670 SM00073 Histidine Phosphotransfer domain A9258_17670 SM00091 PAS domain A9258_17670 SM00387 Histidine kinase-like ATPases A9258_17670 SM00388 His Kinase A (phosphoacceptor) domain A9258_17670 SM00448 cheY-homologous receiver domain A9258_17680 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9258_17685 SM00073 Histidine Phosphotransfer domain A9258_17685 SM00091 PAS domain A9258_17685 SM00387 Histidine kinase-like ATPases A9258_17685 SM00388 His Kinase A (phosphoacceptor) domain A9258_17685 SM00448 cheY-homologous receiver domain A9258_17730 SM01130 A9258_17730 A9258_17780 SM00014 Acid phosphatase homologues A9258_17790 SM00917 LeuA allosteric (dimerisation) domain A9258_17795 SM01329 A9258_17795 A9258_17830 SM00382 ATPases associated with a variety of cellular activities A9258_17835 SM00670 Large family of predicted nucleotide-binding domains A9258_17875 SM00487 DEAD-like helicases superfamily A9258_17875 SM00490 helicase superfamily c-terminal domain A9258_17890 SM00052 Putative diguanylate phosphodiesterase A9258_17890 SM00267 diguanylate cyclase A9258_17905 SM00883 Chaperonin 10 Kd subunit A9258_17980 SM00729 Elongator protein 3, MiaB family, Radical SAM A9258_17995 SM00422 helix_turn_helix, mercury resistance A9258_18000 SM00798 AICARFT/IMPCHase bienzyme A9258_18000 SM00851 MGS-like domain A9258_18005 SM01209 A9258_18005 A9258_18005 SM01210 A9258_18005 A9258_18020 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins A9258_18020 SM00632 A9258_18020 A9258_18020 SM00642 Alpha-amylase domain A9258_18025 SM01126 A9258_18025 A9258_18040 SM00400 zinc finger A9258_18040 SM00493 A9258_18040 A9258_18040 SM00766 DNA primase DnaG DnaB-binding A9258_18060 SM00257 Lysin motif A9258_18100 SM01192 A9258_18100 A9258_18100 SM01193 A9258_18100 A9258_18115 SM00954 Region found in RelA / SpoT proteins A9258_18125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_18125 SM00387 Histidine kinase-like ATPases A9258_18125 SM00388 His Kinase A (phosphoacceptor) domain A9258_18125 SM00448 cheY-homologous receiver domain A9258_18135 SM00644 A9258_18135 A9258_18140 SM00420 helix_turn_helix, Deoxyribose operon repressor A9258_18140 SM01134 A9258_18140 A9258_18205 SM00358 Double-stranded RNA binding motif A9258_18205 SM00535 Ribonuclease III family A9258_18305 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A9258_18330 SM00287 Bacterial SH3 domain homologues A9258_18340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_18340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_18390 SM00382 ATPases associated with a variety of cellular activities A9258_18395 SM00062 Bacterial periplasmic substrate-binding proteins A9258_18400 SM00382 ATPases associated with a variety of cellular activities A9258_18410 SM00448 cheY-homologous receiver domain A9258_18410 SM00862 Transcriptional regulatory protein, C terminal A9258_18415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_18415 SM00387 Histidine kinase-like ATPases A9258_18415 SM00388 His Kinase A (phosphoacceptor) domain A9258_18505 SM00487 DEAD-like helicases superfamily A9258_18505 SM00490 helicase superfamily c-terminal domain A9258_18515 SM00849 Metallo-beta-lactamase superfamily A9258_18545 SM00347 helix_turn_helix multiple antibiotic resistance protein A9258_18555 SM00347 helix_turn_helix multiple antibiotic resistance protein A9258_18570 SM00028 Tetratricopeptide repeats A9258_18570 SM00267 diguanylate cyclase A9258_18575 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A9258_18575 SM00091 PAS domain A9258_18575 SM00267 diguanylate cyclase A9258_18580 SM00327 von Willebrand factor (vWF) type A domain A9258_18585 SM00382 ATPases associated with a variety of cellular activities A9258_18630 SM00829 Enoylreductase A9258_18695 SM00967 RNA 2'-O ribose methyltransferase substrate binding A9258_18700 SM00316 Ribosomal protein S1-like RNA-binding domain A9258_18700 SM00357 Cold shock protein domain A9258_18700 SM00955 A9258_18700 A9258_18705 SM00267 diguanylate cyclase A9258_18720 SM00938 Nitrogen regulatory protein P-II A9258_18805 SM00904 Riboflavin kinase A9258_18820 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A9258_18850 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A9258_18860 SM00927 DNA mismatch repair enzyme MutH A9258_18890 SM00382 ATPases associated with a variety of cellular activities A9258_18890 SM00962 SRP54-type protein, GTPase domain A9258_18890 SM00963 SRP54-type protein, helical bundle domain A9258_18900 SM01091 Transporter associated domain A9258_18915 SM00671 Sel1-like repeats. A9258_18935 SM00062 Bacterial periplasmic substrate-binding proteins A9258_18935 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A9258_18940 SM00382 ATPases associated with a variety of cellular activities A9258_18955 SM00382 ATPases associated with a variety of cellular activities A9258_18970 SM00938 Nitrogen regulatory protein P-II A9258_19035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_19055 SM00487 DEAD-like helicases superfamily A9258_19055 SM00490 helicase superfamily c-terminal domain A9258_19135 SM00245 tail specific protease A9258_19165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9258_19165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_19165 SM01049 A9258_19165 A9258_19180 SM00382 ATPases associated with a variety of cellular activities A9258_19210 SM01266 A9258_19210 A9258_19255 SM00859 Semialdehyde dehydrogenase, NAD binding domain A9258_19290 SM00342 helix_turn_helix, arabinose operon control protein A9258_19325 SM00421 helix_turn_helix, Lux Regulon A9258_19375 SM00382 ATPases associated with a variety of cellular activities A9258_19390 SM00363 S4 RNA-binding domain A9258_19405 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9258_19405 SM00895 A9258_19405 A9258_19440 SM00421 helix_turn_helix, Lux Regulon A9258_19455 SM00357 Cold shock protein domain A9258_19455 SM00955 A9258_19455 A9258_19535 SM00487 DEAD-like helicases superfamily A9258_19535 SM00490 helicase superfamily c-terminal domain A9258_19585 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A9258_19595 SM00862 Transcriptional regulatory protein, C terminal A9258_19735 SM00642 Alpha-amylase domain A9258_19755 SM00344 helix_turn_helix ASNC type A9258_19775 SM00852 Probable molybdopterin binding domain A9258_19785 SM00382 ATPases associated with a variety of cellular activities A9258_19815 SM00100 Cyclic nucleotide-monophosphate binding domain A9258_19850 SM01219 A9258_19850 A9258_19960 SM00267 diguanylate cyclase A9258_19985 SM00876 Biotin and Thiamin Synthesis associated domain A9258_20015 SM00999 Aerolysin toxin A9258_20030 SM00448 cheY-homologous receiver domain A9258_20030 SM00862 Transcriptional regulatory protein, C terminal A9258_20035 SM00388 His Kinase A (phosphoacceptor) domain A9258_20050 SM01018 B12 binding domain A9258_20125 SM00862 Transcriptional regulatory protein, C terminal A9258_20170 SM00342 helix_turn_helix, arabinose operon control protein A9258_20175 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A9258_20175 SM00091 PAS domain A9258_20185 SM00331 Sigma factor PP2C-like phosphatases A9258_20185 SM00387 Histidine kinase-like ATPases A9258_20190 SM00387 Histidine kinase-like ATPases A9258_20190 SM00388 His Kinase A (phosphoacceptor) domain A9258_20190 SM00448 cheY-homologous receiver domain A9258_20195 SM00448 cheY-homologous receiver domain A9258_20195 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9258_20255 SM00886 Stress responsive A/B Barrel Domain A9258_20265 SM00316 Ribosomal protein S1-like RNA-binding domain A9258_20335 SM00382 ATPases associated with a variety of cellular activities A9258_20350 SM00965 Secretin and TonB N terminus short domain A9258_20380 SM00052 Putative diguanylate phosphodiesterase A9258_20380 SM00267 diguanylate cyclase A9258_20385 SM00052 Putative diguanylate phosphodiesterase A9258_20415 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9258_20415 SM00866 A9258_20415 A9258_20420 SM00947 Carbonic anhydrase A9258_20435 SM00382 ATPases associated with a variety of cellular activities A9258_20440 SM00382 ATPases associated with a variety of cellular activities A9258_20440 SM00962 SRP54-type protein, GTPase domain A9258_20440 SM00963 SRP54-type protein, helical bundle domain A9258_20470 SM00155 Phospholipase D. Active site motifs. A9258_20475 SM00062 Bacterial periplasmic substrate-binding proteins A9258_20560 SM00822 A9258_20560 A9258_20620 SM00662 RNA polymerases D A9258_20625 SM00363 S4 RNA-binding domain A9258_20625 SM01390 A9258_20625 A9258_20685 SM01374 A9258_20685 A9258_20705 SM00322 K homology RNA-binding domain A9258_20720 SM01382 A9258_20720 A9258_20720 SM01383 A9258_20720 A9258_20740 SM01403 A9258_20740 A9258_20750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_20750 SM00387 Histidine kinase-like ATPases A9258_20750 SM00388 His Kinase A (phosphoacceptor) domain A9258_20755 SM00448 cheY-homologous receiver domain A9258_20755 SM00862 Transcriptional regulatory protein, C terminal A9258_20765 SM00316 Ribosomal protein S1-like RNA-binding domain A9258_20765 SM00732 Likely ribonuclease with RNase H fold. A9258_20810 SM00450 Rhodanese Homology Domain A9258_20830 SM00354 helix_turn _helix lactose operon repressor A9258_20855 SM00155 Phospholipase D. Active site motifs. A9258_20860 SM00487 DEAD-like helicases superfamily A9258_20860 SM00490 helicase superfamily c-terminal domain A9258_20895 SM01230 A9258_20895 A9258_20905 SM00091 PAS domain A9258_20905 SM00387 Histidine kinase-like ATPases A9258_20905 SM00388 His Kinase A (phosphoacceptor) domain A9258_20910 SM00382 ATPases associated with a variety of cellular activities A9258_20910 SM00448 cheY-homologous receiver domain A9258_20920 SM00729 Elongator protein 3, MiaB family, Radical SAM A9258_20970 SM01001 AIR carboxylase A9258_20990 SM00257 Lysin motif A9258_21045 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A9258_21045 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A9258_21065 SM00530 Helix-turn-helix XRE-family like proteins A9258_21085 SM00342 helix_turn_helix, arabinose operon control protein A9258_21095 SM00831 Cation transporter/ATPase, N-terminus A9258_21155 SM01321 A9258_21155 A9258_21170 SM00382 ATPases associated with a variety of cellular activities A9258_21190 SM00829 Enoylreductase A9258_21235 SM01038 Beta galactosidase small chain A9258_21240 SM00354 helix_turn _helix lactose operon repressor A9258_21280 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A9258_21280 SM00474 3'-5' exonuclease A9258_21280 SM00475 5'-3' exonuclease A9258_21280 SM00482 DNA polymerase A domain A9258_21300 SM00971 Serine acetyltransferase, N-terminal A9258_21310 SM00448 cheY-homologous receiver domain A9258_21310 SM00862 Transcriptional regulatory protein, C terminal A9258_21315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_21315 SM00387 Histidine kinase-like ATPases A9258_21315 SM00388 His Kinase A (phosphoacceptor) domain A9258_21345 SM00563 Phosphate acyltransferases A9258_21370 SM00829 Enoylreductase A9258_21375 SM00354 helix_turn _helix lactose operon repressor A9258_21425 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A9258_21425 SM01232 A9258_21425 A9258_21495 SM00881 CoA binding domain A9258_21555 SM00448 cheY-homologous receiver domain A9258_21555 SM00862 Transcriptional regulatory protein, C terminal A9258_21560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9258_21560 SM00387 Histidine kinase-like ATPases A9258_21560 SM00388 His Kinase A (phosphoacceptor) domain A9258_21605 SM00836 DALR anticodon binding domain A9258_21660 SM00849 Metallo-beta-lactamase superfamily A9258_21665 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A9258_21665 SM00382 ATPases associated with a variety of cellular activities A9258_21670 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9258_21670 SM00866 A9258_21670 A9258_21685 SM00354 helix_turn _helix lactose operon repressor A9258_21705 SM00382 ATPases associated with a variety of cellular activities A9258_21710 SM00382 ATPases associated with a variety of cellular activities A9258_21715 SM00342 helix_turn_helix, arabinose operon control protein A9258_21725 SM00450 Rhodanese Homology Domain A9258_21760 SM00357 Cold shock protein domain A9258_21760 SM00382 ATPases associated with a variety of cellular activities A9258_21760 SM00959 Rho termination factor, N-terminal domain A9258_21770 SM00487 DEAD-like helicases superfamily A9258_21770 SM00490 helicase superfamily c-terminal domain A9258_21795 SM00052 Putative diguanylate phosphodiesterase A9258_21795 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A9258_21795 SM00091 PAS domain A9258_21795 SM00267 diguanylate cyclase A9258_21805 SM01004 Delta-aminolevulinic acid dehydratase A9258_21915 SM00421 helix_turn_helix, Lux Regulon A9258_21925 SM00420 helix_turn_helix, Deoxyribose operon repressor A9258_21925 SM01134 A9258_21925 A9258_21930 SM00448 cheY-homologous receiver domain A9258_21930 SM00862 Transcriptional regulatory protein, C terminal A9258_21935 SM00387 Histidine kinase-like ATPases A9258_21935 SM00388 His Kinase A (phosphoacceptor) domain A9258_21960 SM00382 ATPases associated with a variety of cellular activities A9258_22000 SM00470 ParB-like nuclease domain A9258_22015 SM01228 A9258_22015 A9258_22030 SM00382 ATPases associated with a variety of cellular activities A9258_22035 SM00382 ATPases associated with a variety of cellular activities A9258_22065 SM00382 ATPases associated with a variety of cellular activities A9258_22075 SM00062 Bacterial periplasmic substrate-binding proteins A9258_22075 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins.