locus-tag class description V469_00005 PF00308 Bacterial dnaA protein V469_00005 PF08299 Bacterial dnaA protein helix-turn-helix V469_00005 PF11638 DnaA N-terminal domain V469_00010 PF02767 DNA polymerase III beta subunit, central domain V469_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain V469_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain V469_00015 PF02463 RecF/RecN/SMC N terminal domain V469_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_00020 PF18053 DNA gyrase B subunit insert domain V469_00020 PF00986 DNA gyrase B subunit, carboxyl terminus V469_00020 PF01751 Toprim domain V469_00020 PF00204 DNA gyrase B V469_00030 PF08279 HTH domain V469_00030 PF13280 WYL domain V469_00035 PF00011 Hsp20/alpha crystallin family V469_00040 PF00011 Hsp20/alpha crystallin family V469_00045 PF00155 Aminotransferase class I and II V469_00060 PF07690 Major Facilitator Superfamily V469_00065 PF00072 Response regulator receiver domain V469_00065 PF00486 Transcriptional regulatory protein, C terminal V469_00070 PF02702 Osmosensitive K+ channel His kinase sensor domain V469_00070 PF00512 His Kinase A (phospho-acceptor) domain V469_00070 PF13492 GAF domain V469_00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_00070 PF13493 Domain of unknown function (DUF4118) V469_00075 PF02669 K+-transporting ATPase, c chain V469_00090 PF03814 Potassium-transporting ATPase A subunit V469_00095 PF07992 Pyridine nucleotide-disulphide oxidoreductase V469_00095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain V469_00100 PF00497 Bacterial extracellular solute-binding proteins, family 3 V469_00100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_00100 PF00512 His Kinase A (phospho-acceptor) domain V469_00105 PF00873 AcrB/AcrD/AcrF family V469_00110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V469_00115 PF00440 Bacterial regulatory proteins, tetR family V469_00145 PF00224 Pyruvate kinase, barrel domain V469_00145 PF02887 Pyruvate kinase, alpha/beta domain V469_00150 PF07690 Major Facilitator Superfamily V469_00160 PF00512 His Kinase A (phospho-acceptor) domain V469_00160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_00160 PF00672 HAMP domain V469_00165 PF02954 Bacterial regulatory protein, Fis family V469_00165 PF14532 Sigma-54 interaction domain V469_00165 PF00072 Response regulator receiver domain V469_00180 PF12146 Serine aminopeptidase, S33 V469_00185 PF00132 Bacterial transferase hexapeptide (six repeats) V469_00195 PF13291 ACT domain V469_00195 PF04607 Region found in RelA / SpoT proteins V469_00195 PF02824 TGS domain V469_00200 PF01192 RNA polymerase Rpb6 V469_00205 PF00625 Guanylate kinase V469_00210 PF01075 Glycosyltransferase family 9 (heptosyltransferase) V469_00225 PF00892 EamA-like transporter family V469_00245 PF03466 LysR substrate binding domain V469_00245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_00250 PF00579 tRNA synthetases class I (W and Y) V469_00255 PF00582 Universal stress protein family V469_00260 PF12241 Trans-2-enoyl-CoA reductase catalytic region V469_00260 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase V469_00260 PF07055 Enoyl reductase FAD binding domain V469_00265 PF00990 Diguanylate cyclase, GGDEF domain V469_00270 PF00210 Ferritin-like domain V469_00280 PF07690 Major Facilitator Superfamily V469_00285 PF01810 LysE type translocator V469_00300 PF16967 E-set like domain V469_00300 PF15976 CS1-pili formation C-terminal V469_00305 PF18649 EcpB C-terminal domain V469_00310 PF16449 Fimbrillin MatB V469_00315 PF00196 Bacterial regulatory proteins, luxR family V469_00315 PF00072 Response regulator receiver domain V469_00320 PF00072 Response regulator receiver domain V469_00320 PF00497 Bacterial extracellular solute-binding proteins, family 3 V469_00320 PF00989 PAS fold V469_00320 PF01627 Hpt domain V469_00320 PF00512 His Kinase A (phospho-acceptor) domain V469_00320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_00330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_00330 PF06580 Histidine kinase V469_00330 PF07694 5TMR of 5TMR-LYT V469_00335 PF04397 LytTr DNA-binding domain V469_00335 PF00072 Response regulator receiver domain V469_00340 PF07690 Major Facilitator Superfamily V469_00345 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain V469_00345 PF02222 ATP-grasp domain V469_00350 PF00731 AIR carboxylase V469_00365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_00365 PF03466 LysR substrate binding domain V469_00370 PF07715 TonB-dependent Receptor Plug Domain V469_00370 PF00593 TonB dependent receptor V469_00375 PF01177 Asp/Glu/Hydantoin racemase V469_00415 PF00899 ThiF family V469_00420 PF02657 Fe-S metabolism associated domain V469_00425 PF00266 Aminotransferase class-V V469_00430 PF13361 UvrD-like helicase C-terminal domain V469_00430 PF00580 UvrD/REP helicase N-terminal domain V469_00435 PF03707 Bacterial signalling protein N terminal repeat V469_00435 PF00563 EAL domain V469_00435 PF00990 Diguanylate cyclase, GGDEF domain V469_00440 PF13442 Cytochrome C oxidase, cbb3-type, subunit III V469_00445 PF08240 Alcohol dehydrogenase GroES-like domain V469_00445 PF00107 Zinc-binding dehydrogenase V469_00450 PF00155 Aminotransferase class I and II V469_00455 PF08360 QacR-like protein, C-terminal region V469_00455 PF00440 Bacterial regulatory proteins, tetR family V469_00460 PF01370 NAD dependent epimerase/dehydratase family V469_00475 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) V469_00495 PF03755 YicC-like family, N-terminal region V469_00495 PF08340 Domain of unknown function (DUF1732) V469_00500 PF01138 3' exoribonuclease family, domain 1 V469_00500 PF03725 3' exoribonuclease family, domain 2 V469_00505 PF00156 Phosphoribosyl transferase domain V469_00515 PF00403 Heavy-metal-associated domain V469_00520 PF09278 MerR, DNA binding V469_00520 PF00376 MerR family regulatory protein V469_00525 PF00563 EAL domain V469_00525 PF00360 Phytochrome region V469_00525 PF00990 Diguanylate cyclase, GGDEF domain V469_00525 PF01590 GAF domain V469_00530 PF06288 Protein of unknown function (DUF1040) V469_00535 PF13746 4Fe-4S dicluster domain V469_00535 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase V469_00535 PF12801 4Fe-4S binding domain V469_00540 PF01636 Phosphotransferase enzyme family V469_00545 PF01323 DSBA-like thioredoxin domain V469_00550 PF00528 Binding-protein-dependent transport system inner membrane component V469_00555 PF00005 ABC transporter V469_00565 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family V469_00565 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain V469_00570 PF00857 Isochorismatase family V469_00580 PF04463 Protein of unknown function (DUF523) V469_00585 PF01553 Acyltransferase V469_00590 PF01553 Acyltransferase V469_00595 PF13335 Magnesium chelatase, subunit ChlI C-terminal V469_00595 PF01078 Magnesium chelatase, subunit ChlI V469_00600 PF00205 Thiamine pyrophosphate enzyme, central domain V469_00600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain V469_00600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain V469_00610 PF01063 Amino-transferase class IV V469_00615 PF00920 Dehydratase family V469_00620 PF00585 C-terminal regulatory domain of Threonine dehydratase V469_00620 PF00291 Pyridoxal-phosphate dependent enzyme V469_00625 PF00691 OmpA family V469_00625 PF01389 OmpA-like transmembrane domain V469_00635 PF00270 DEAD/DEAH box helicase V469_00635 PF18319 PriA DNA helicase Cys-rich region (CRR) domain V469_00635 PF18074 Primosomal protein N C-terminal domain V469_00635 PF17764 3′ DNA-binding domain (3′BD) V469_00635 PF00271 Helicase conserved C-terminal domain V469_00640 PF01197 Ribosomal protein L31 V469_00645 PF11066 Protein of unknown function (DUF2867) V469_00645 PF13460 NAD(P)H-binding V469_00650 PF03949 Malic enzyme, NAD binding domain V469_00650 PF00390 Malic enzyme, N-terminal domain V469_00660 PF00512 His Kinase A (phospho-acceptor) domain V469_00660 PF00672 HAMP domain V469_00660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_00665 PF00072 Response regulator receiver domain V469_00665 PF00486 Transcriptional regulatory protein, C terminal V469_00670 PF05958 tRNA (Uracil-5-)-methyltransferase V469_00685 PF02903 Alpha amylase, N-terminal ig-like domain V469_00685 PF00128 Alpha amylase, catalytic domain V469_00700 PF00012 Hsp70 protein V469_00705 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain V469_00705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain V469_00710 PF05981 CreA protein V469_00725 PF01258 Prokaryotic dksA/traR C4-type zinc finger V469_00730 PF00120 Glutamine synthetase, catalytic domain V469_00735 PF00202 Aminotransferase class-III V469_00740 PF13416 Bacterial extracellular solute-binding protein V469_00745 PF13416 Bacterial extracellular solute-binding protein V469_00750 PF08402 TOBE domain V469_00750 PF00005 ABC transporter V469_00755 PF00528 Binding-protein-dependent transport system inner membrane component V469_00760 PF00528 Binding-protein-dependent transport system inner membrane component V469_00765 PF03473 MOSC domain V469_00765 PF03475 3-alpha domain V469_00780 PF03061 Thioesterase superfamily V469_00785 PF00271 Helicase conserved C-terminal domain V469_00785 PF00270 DEAD/DEAH box helicase V469_00785 PF00570 HRDC domain V469_00785 PF16124 RecQ zinc-binding V469_00785 PF09382 RQC domain V469_00790 PF00034 Cytochrome c V469_00795 PF02696 Uncharacterized ACR, YdiU/UPF0061 family V469_00805 PF02592 Putative vitamin uptake transporter V469_00810 PF03737 Aldolase/RraA V469_00815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_00815 PF00672 HAMP domain V469_00820 PF00571 CBS domain V469_00820 PF01769 Divalent cation transporter V469_00820 PF03448 MgtE intracellular N domain V469_00825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases V469_00825 PF10414 Sirohaem synthase dimerisation region V469_00825 PF14824 Sirohaem biosynthesis protein central V469_00830 PF01226 Formate/nitrite transporter V469_00835 PF13806 Rieske-like [2Fe-2S] domain V469_00845 PF18267 Rubredoxin NAD+ reductase C-terminal domain V469_00845 PF07992 Pyridine nucleotide-disulphide oxidoreductase V469_00845 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain V469_00845 PF04324 BFD-like [2Fe-2S] binding domain V469_00845 PF01077 Nitrite and sulphite reductase 4Fe-4S domain V469_00850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_00850 PF03466 LysR substrate binding domain V469_00855 PF07690 Major Facilitator Superfamily V469_00860 PF10431 C-terminal, D2-small domain, of ClpB protein V469_00860 PF07724 AAA domain (Cdc48 subfamily) V469_00860 PF00004 ATPase family associated with various cellular activities (AAA) V469_00865 PF00227 Proteasome subunit V469_00875 PF05746 DALR anticodon binding domain V469_00875 PF03485 Arginyl tRNA synthetase N terminal domain V469_00875 PF00750 tRNA synthetases class I (R) V469_00885 PF04542 Sigma-70 region 2 V469_00885 PF04545 Sigma-70, region 4 V469_00890 PF12973 ChrR Cupin-like domain V469_00895 PF02673 Bacitracin resistance protein BacA V469_00900 PF00248 Aldo/keto reductase family V469_00905 PF01263 Aldose 1-epimerase V469_00910 PF00288 GHMP kinases N terminal domain V469_00910 PF08544 GHMP kinases C terminal V469_00910 PF10509 Galactokinase galactose-binding signature V469_00915 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain V469_00915 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain V469_00920 PF16363 GDP-mannose 4,6 dehydratase V469_00925 PF00356 Bacterial regulatory proteins, lacI family V469_00930 PF16353 Domain of unknown function(DUF4981) V469_00930 PF02929 Beta galactosidase small chain V469_00930 PF00703 Glycosyl hydrolases family 2 V469_00930 PF02836 Glycosyl hydrolases family 2, TIM barrel domain V469_00930 PF02837 Glycosyl hydrolases family 2, sugar binding domain V469_00935 PF13407 Periplasmic binding protein domain V469_00940 PF00005 ABC transporter V469_00945 PF02653 Branched-chain amino acid transport system / permease component V469_00950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_00950 PF00672 HAMP domain V469_00950 PF02743 Cache domain V469_00975 PF00696 Amino acid kinase family V469_00980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain V469_00980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain V469_00985 PF03606 C4-dicarboxylate anaerobic carrier V469_00990 PF01316 Arginine repressor, DNA binding domain V469_00990 PF02863 Arginine repressor, C-terminal domain V469_00995 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain V469_00995 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain V469_01000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain V469_01000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain V469_01015 PF02666 Phosphatidylserine decarboxylase V469_01020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_01020 PF02743 Cache domain V469_01020 PF00672 HAMP domain V469_01025 PF08212 Lipocalin-like domain V469_01030 PF06719 AraC-type transcriptional regulator N-terminus V469_01030 PF12833 Helix-turn-helix domain V469_01035 PF00465 Iron-containing alcohol dehydrogenase V469_01040 PF01262 Alanine dehydrogenase/PNT, C-terminal domain V469_01040 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch V469_01040 PF05222 Alanine dehydrogenase/PNT, N-terminal domain V469_01045 PF02233 NAD(P) transhydrogenase beta subunit V469_01055 PF08348 YheO-like PAS domain V469_01055 PF13309 HTH domain V469_01060 PF03313 Serine dehydratase alpha chain V469_01065 PF00375 Sodium:dicarboxylate symporter family V469_01070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain V469_01070 PF07992 Pyridine nucleotide-disulphide oxidoreductase V469_01075 PF13525 Outer membrane lipoprotein V469_01080 PF01479 S4 domain V469_01080 PF00849 RNA pseudouridylate synthase V469_01090 PF00004 ATPase family associated with various cellular activities (AAA) V469_01090 PF07724 AAA domain (Cdc48 subfamily) V469_01090 PF10431 C-terminal, D2-small domain, of ClpB protein V469_01090 PF17871 AAA lid domain V469_01090 PF02861 Clp amino terminal domain, pathogenicity island component V469_01100 PF03590 Aspartate-ammonia ligase V469_01105 PF01037 Lrp/AsnC ligand binding domain V469_01115 PF10063 Uncharacterized integral membrane protein (DUF2301) V469_01120 PF00478 IMP dehydrogenase / GMP reductase domain V469_01120 PF00571 CBS domain V469_01140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_01140 PF00512 His Kinase A (phospho-acceptor) domain V469_01150 PF00158 Sigma-54 interaction domain V469_01150 PF00072 Response regulator receiver domain V469_01155 PF06496 Protein of unknown function (DUF1097) V469_01165 PF00174 Oxidoreductase molybdopterin binding domain V469_01170 PF01794 Ferric reductase like transmembrane component V469_01185 PF00486 Transcriptional regulatory protein, C terminal V469_01185 PF00072 Response regulator receiver domain V469_01190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_01190 PF08918 PhoQ Sensor V469_01200 PF01568 Molydopterin dinucleotide binding domain V469_01200 PF18364 Molybdopterin oxidoreductase N-terminal domain V469_01200 PF00384 Molybdopterin oxidoreductase V469_01205 PF03264 NapC/NirT cytochrome c family, N-terminal region V469_01210 PF01131 DNA topoisomerase V469_01210 PF01751 Toprim domain V469_01225 PF12833 Helix-turn-helix domain V469_01225 PF12852 Cupin V469_01230 PF02386 Cation transport protein V469_01235 PF02080 TrkA-C domain V469_01235 PF02254 TrkA-N domain V469_01240 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain V469_01240 PF01565 FAD binding domain V469_01245 PF03099 Biotin/lipoate A/B protein ligase family V469_01245 PF08279 HTH domain V469_01245 PF02237 Biotin protein ligase C terminal domain V469_01250 PF00485 Phosphoribulokinase / Uridine kinase family V469_01265 PF03143 Elongation factor Tu C-terminal domain V469_01265 PF00009 Elongation factor Tu GTP binding domain V469_01265 PF03144 Elongation factor Tu domain 2 V469_01275 PF00584 SecE/Sec61-gamma subunits of protein translocation complex V469_01280 PF02357 Transcription termination factor nusG V469_01280 PF00467 KOW motif V469_01285 PF00298 Ribosomal protein L11, RNA binding domain V469_01285 PF03946 Ribosomal protein L11, N-terminal domain V469_01290 PF00687 Ribosomal protein L1p/L10e family V469_01295 PF00466 Ribosomal protein L10 V469_01300 PF16320 Ribosomal protein L7/L12 dimerisation domain V469_01300 PF00542 Ribosomal protein L7/L12 C-terminal domain V469_01305 PF04563 RNA polymerase beta subunit V469_01305 PF04565 RNA polymerase Rpb2, domain 3 V469_01305 PF04561 RNA polymerase Rpb2, domain 2 V469_01305 PF04560 RNA polymerase Rpb2, domain 7 V469_01305 PF00562 RNA polymerase Rpb2, domain 6 V469_01305 PF10385 RNA polymerase beta subunit external 1 domain V469_01310 PF04983 RNA polymerase Rpb1, domain 3 V469_01310 PF04998 RNA polymerase Rpb1, domain 5 V469_01310 PF00623 RNA polymerase Rpb1, domain 2 V469_01310 PF04997 RNA polymerase Rpb1, domain 1 V469_01310 PF05000 RNA polymerase Rpb1, domain 4 V469_01320 PF13309 HTH domain V469_01320 PF08348 YheO-like PAS domain V469_01325 PF01042 Endoribonuclease L-PSP V469_01330 PF02635 DsrE/DsrF-like family V469_01335 PF02635 DsrE/DsrF-like family V469_01340 PF04077 DsrH like protein V469_01345 PF00164 Ribosomal protein S12/S23 V469_01350 PF00177 Ribosomal protein S7p/S5e V469_01355 PF14492 Elongation Factor G, domain II V469_01355 PF00679 Elongation factor G C-terminus V469_01355 PF03764 Elongation factor G, domain IV V469_01355 PF00009 Elongation factor Tu GTP binding domain V469_01355 PF03144 Elongation factor Tu domain 2 V469_01360 PF00009 Elongation factor Tu GTP binding domain V469_01360 PF03144 Elongation factor Tu domain 2 V469_01360 PF03143 Elongation factor Tu C-terminal domain V469_01405 PF00860 Permease family V469_01410 PF02733 Dak1 domain V469_01415 PF02734 DAK2 domain V469_01420 PF03610 PTS system fructose IIA component V469_01420 PF05524 PEP-utilising enzyme, N-terminal V469_01420 PF00391 PEP-utilising enzyme, mobile domain V469_01420 PF00381 PTS HPr component phosphorylation site V469_01425 PF00465 Iron-containing alcohol dehydrogenase V469_01430 PF02954 Bacterial regulatory protein, Fis family V469_01430 PF00989 PAS fold V469_01430 PF00158 Sigma-54 interaction domain V469_01435 PF03466 LysR substrate binding domain V469_01435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_01440 PF04371 Porphyromonas-type peptidyl-arginine deiminase V469_01445 PF00106 short chain dehydrogenase V469_01450 PF01594 AI-2E family transporter V469_01455 PF00293 NUDIX domain V469_01480 PF00199 Catalase V469_01480 PF06628 Catalase-related immune-responsive V469_01485 PF00583 Acetyltransferase (GNAT) family V469_01505 PF17158 Membrane-associated sensor, integral membrane domain V469_01505 PF00990 Diguanylate cyclase, GGDEF domain V469_01515 PF08402 TOBE domain V469_01515 PF00005 ABC transporter V469_01525 PF00528 Binding-protein-dependent transport system inner membrane component V469_01540 PF07702 UTRA domain V469_01540 PF00392 Bacterial regulatory proteins, gntR family V469_01550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_01550 PF03466 LysR substrate binding domain V469_01560 PF02678 Pirin V469_01560 PF17954 Quercetinase C-terminal cupin domain V469_01565 PF07681 DoxX V469_01570 PF17946 RecC C-terminal domain V469_01575 PF13361 UvrD-like helicase C-terminal domain V469_01575 PF00580 UvrD/REP helicase N-terminal domain V469_01575 PF12705 PD-(D/E)XK nuclease superfamily V469_01580 PF13538 UvrD-like helicase C-terminal domain V469_01590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V469_01600 PF17151 Periplasmic sensor domain V469_01600 PF00990 Diguanylate cyclase, GGDEF domain V469_01620 PF00486 Transcriptional regulatory protein, C terminal V469_01620 PF00072 Response regulator receiver domain V469_01625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_01625 PF00512 His Kinase A (phospho-acceptor) domain V469_01625 PF00672 HAMP domain V469_01630 PF00360 Phytochrome region V469_01630 PF00990 Diguanylate cyclase, GGDEF domain V469_01630 PF01590 GAF domain V469_01630 PF00563 EAL domain V469_01635 PF07715 TonB-dependent Receptor Plug Domain V469_01635 PF00593 TonB dependent receptor V469_01640 PF00313 'Cold-shock' DNA-binding domain V469_01650 PF16916 Dimerisation domain of Zinc Transporter V469_01650 PF01545 Cation efflux family V469_01665 PF00436 Single-strand binding protein family V469_01670 PF00196 Bacterial regulatory proteins, luxR family V469_01675 PF17755 UvrA DNA-binding domain V469_01675 PF17760 UvrA interaction domain V469_01675 PF00005 ABC transporter V469_01690 PF03922 OmpW family V469_01695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_01695 PF00672 HAMP domain V469_01710 PF02219 Methylenetetrahydrofolate reductase V469_01720 PF03594 Benzoate membrane transport protein V469_01725 PF01381 Helix-turn-helix V469_01725 PF07883 Cupin domain V469_01760 PF04363 Protein of unknown function (DUF496) V469_01770 PF04751 Protein of unknown function (DUF615) V469_01775 PF01523 Putative modulator of DNA gyrase V469_01780 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) V469_01785 PF01722 BolA-like protein V469_01795 PF05494 MlaC protein V469_01800 PF02470 MlaD protein V469_01805 PF02405 Permease MlaE V469_01810 PF00005 ABC transporter V469_01815 PF00571 CBS domain V469_01815 PF01380 SIS domain V469_01825 PF06835 Lipopolysaccharide-assembly, LptC-related V469_01830 PF03968 OstA-like protein V469_01835 PF00005 ABC transporter V469_01835 PF12399 Branched-chain amino acid ATP-binding cassette transporter V469_01840 PF04963 Sigma-54 factor, core binding domain V469_01840 PF04552 Sigma-54, DNA binding domain V469_01840 PF00309 Sigma-54 factor, Activator interacting domain (AID) V469_01845 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein V469_01850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 V469_01855 PF03668 P-loop ATPase protein family V469_01860 PF00381 PTS HPr component phosphorylation site V469_01865 PF08279 HTH domain V469_01865 PF05043 Mga helix-turn-helix domain V469_01865 PF00874 PRD domain V469_01865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 V469_01870 PF07071 KDGP aldolase V469_01875 PF03841 L-seryl-tRNA selenium transferase V469_01880 PF01979 Amidohydrolase family V469_01910 PF13180 PDZ domain V469_01915 PF13180 PDZ domain V469_01915 PF00595 PDZ domain V469_01925 PF03969 AFG1-like ATPase V469_01930 PF00572 Ribosomal protein L13 V469_01935 PF00380 Ribosomal protein S9/S16 V469_01940 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal V469_01940 PF00355 Rieske [2Fe-2S] domain V469_01945 PF00032 Cytochrome b(C-terminal)/b6/petD V469_01945 PF00033 Cytochrome b/b6/petB V469_01950 PF02167 Cytochrome C1 family V469_01955 PF00043 Glutathione S-transferase, C-terminal domain V469_01955 PF02798 Glutathione S-transferase, N-terminal domain V469_01960 PF04386 Stringent starvation protein B V469_01965 PF04972 BON domain V469_01970 PF13580 SIS domain V469_01975 PF02021 Uncharacterised protein family UPF0102 V469_01980 PF04348 LppC putative lipoprotein V469_01985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases V469_01990 PF02381 MraZ protein, putative antitoxin-like V469_01995 PF01795 MraW methylase family V469_02000 PF04999 Cell division protein FtsL V469_02005 PF03717 Penicillin-binding Protein dimerisation domain V469_02005 PF00905 Penicillin binding protein transpeptidase domain V469_02010 PF08245 Mur ligase middle domain V469_02010 PF01225 Mur ligase family, catalytic domain V469_02010 PF02875 Mur ligase family, glutamate ligase domain V469_02015 PF02875 Mur ligase family, glutamate ligase domain V469_02015 PF08245 Mur ligase middle domain V469_02015 PF01225 Mur ligase family, catalytic domain V469_02020 PF00953 Glycosyl transferase family 4 V469_02020 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 V469_02025 PF02875 Mur ligase family, glutamate ligase domain V469_02025 PF08245 Mur ligase middle domain V469_02030 PF01098 Cell cycle protein V469_02035 PF04101 Glycosyltransferase family 28 C-terminal domain V469_02035 PF03033 Glycosyltransferase family 28 N-terminal domain V469_02040 PF01225 Mur ligase family, catalytic domain V469_02040 PF02875 Mur ligase family, glutamate ligase domain V469_02040 PF08245 Mur ligase middle domain V469_02045 PF03799 Cell division protein FtsQ V469_02045 PF08478 POTRA domain, FtsQ-type V469_02050 PF02491 SHS2 domain inserted in FTSA V469_02055 PF00091 Tubulin/FtsZ family, GTPase domain V469_02055 PF12327 FtsZ family, C-terminal domain V469_02060 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase V469_02070 PF07516 SecA Wing and Scaffold domain V469_02070 PF01043 SecA preprotein cross-linking domain V469_02070 PF02810 SEC-C motif V469_02070 PF07517 SecA DEAD-like domain V469_02080 PF00293 NUDIX domain V469_02085 PF03884 DNA gyrase inhibitor YacG V469_02090 PF07072 Cell division protein V469_02095 PF01121 Dephospho-CoA kinase V469_02100 PF06750 Bacterial Peptidase A24 N-terminal domain V469_02100 PF01478 Type IV leader peptidase family V469_02105 PF00482 Type II secretion system (T2SS), protein F V469_02110 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain V469_02110 PF00437 Type II/IV secretion system protein V469_02120 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain V469_02120 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain V469_02130 PF01510 N-acetylmuramoyl-L-alanine amidase V469_02135 PF07729 FCD domain V469_02135 PF00392 Bacterial regulatory proteins, gntR family V469_02140 PF00456 Transketolase, thiamine diphosphate binding domain V469_02140 PF17831 Pyruvate dehydrogenase E1 component middle domain V469_02145 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) V469_02145 PF02817 e3 binding domain V469_02145 PF00364 Biotin-requiring enzyme V469_02150 PF07992 Pyridine nucleotide-disulphide oxidoreductase V469_02150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain V469_02155 PF13426 PAS domain V469_02155 PF08448 PAS fold V469_02155 PF08447 PAS fold V469_02155 PF05231 MASE1 V469_02155 PF00563 EAL domain V469_02155 PF00990 Diguanylate cyclase, GGDEF domain V469_02165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_02165 PF00672 HAMP domain V469_02165 PF12729 Four helix bundle sensory module for signal transduction V469_02170 PF00672 HAMP domain V469_02170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_02170 PF12729 Four helix bundle sensory module for signal transduction V469_02175 PF01734 Patatin-like phospholipase V469_02180 PF11791 Aconitate B N-terminal domain V469_02180 PF06434 Aconitate hydratase 2 N-terminus V469_02180 PF00330 Aconitase family (aconitate hydratase) V469_02190 PF03466 LysR substrate binding domain V469_02190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_02195 PF01810 LysE type translocator V469_02205 PF07683 Cobalamin synthesis protein cobW C-terminal domain V469_02205 PF02492 CobW/HypB/UreG, nucleotide-binding domain V469_02210 PF07690 Major Facilitator Superfamily V469_02220 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) V469_02225 PF02152 Dihydroneopterin aldolase V469_02230 PF02660 Glycerol-3-phosphate acyltransferase V469_02275 PF01584 CheW-like domain V469_02275 PF00072 Response regulator receiver domain V469_02280 PF00106 short chain dehydrogenase V469_02285 PF05127 Helicase V469_02285 PF13718 GNAT acetyltransferase 2 V469_02285 PF17176 tRNA-binding domain V469_02285 PF08351 Domain of unknown function (DUF1726) V469_02300 PF00210 Ferritin-like domain V469_02310 PF02142 MGS-like domain V469_02325 PF00710 Asparaginase, N-terminal V469_02325 PF17763 Glutaminase/Asparaginase C-terminal domain V469_02340 PF00356 Bacterial regulatory proteins, lacI family V469_02345 PF02378 Phosphotransferase system, EIIC V469_02345 PF00367 phosphotransferase system, EIIB V469_02350 PF00128 Alpha amylase, catalytic domain V469_02350 PF11941 Domain of unknown function (DUF3459) V469_02355 PF12464 Maltose acetyltransferase V469_02355 PF14602 Hexapeptide repeat of succinyl-transferase V469_02360 PF01037 Lrp/AsnC ligand binding domain V469_02365 PF00892 EamA-like transporter family V469_02375 PF00171 Aldehyde dehydrogenase family V469_02380 PF00528 Binding-protein-dependent transport system inner membrane component V469_02385 PF00528 Binding-protein-dependent transport system inner membrane component V469_02390 PF08402 TOBE domain V469_02390 PF00005 ABC transporter V469_02395 PF13416 Bacterial extracellular solute-binding protein V469_02400 PF03466 LysR substrate binding domain V469_02400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_02405 PF03553 Na+/H+ antiporter family V469_02450 PF00483 Nucleotidyl transferase V469_02455 PF08468 Methyltransferase small domain N-terminal V469_02455 PF05175 Methyltransferase small domain V469_02460 PF00701 Dihydrodipicolinate synthetase family V469_02465 PF01590 GAF domain V469_02465 PF00563 EAL domain V469_02465 PF00990 Diguanylate cyclase, GGDEF domain V469_02465 PF00360 Phytochrome region V469_02475 PF13419 Haloacid dehalogenase-like hydrolase V469_02480 PF17209 Hfq protein V469_02485 PF04403 Paraquat-inducible protein A V469_02490 PF02470 MlaD protein V469_02495 PF03886 ABC-type transport auxiliary lipoprotein component V469_02500 PF01389 OmpA-like transmembrane domain V469_02500 PF00691 OmpA family V469_02510 PF00657 GDSL-like Lipase/Acylhydrolase V469_02515 PF04076 Bacterial OB fold (BOF) protein V469_02520 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain V469_02520 PF01464 Transglycosylase SLT domain V469_02525 PF04362 Bacterial Fe(2+) trafficking V469_02530 PF10576 Iron-sulfur binding domain of endonuclease III V469_02530 PF00730 HhH-GPD superfamily base excision DNA repair protein V469_02530 PF00633 Helix-hairpin-helix motif V469_02530 PF14815 NUDIX domain V469_02535 PF16537 Type II secretion system protein B V469_02540 PF01471 Putative peptidoglycan binding domain V469_02540 PF13401 AAA domain V469_02550 PF01743 Poly A polymerase head domain V469_02550 PF01966 HD domain V469_02550 PF12627 Probable RNA and SrmB- binding site of polymerase A V469_02565 PF04172 LrgB-like family V469_02570 PF03788 LrgA family V469_02575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_02575 PF03466 LysR substrate binding domain V469_02580 PF00155 Aminotransferase class I and II V469_02580 PF00392 Bacterial regulatory proteins, gntR family V469_02600 PF04073 Aminoacyl-tRNA editing domain V469_02605 PF01384 Phosphate transporter family V469_02610 PF01865 Protein of unknown function DUF47 V469_02625 PF03279 Bacterial lipid A biosynthesis acyltransferase V469_02630 PF00294 pfkB family carbohydrate kinase V469_02630 PF01467 Cytidylyltransferase-like V469_02635 PF02321 Outer membrane efflux protein V469_02640 PF00293 NUDIX domain V469_02645 PF06853 Protein of unknown function (DUF1249) V469_02650 PF00149 Calcineurin-like phosphoesterase V469_02655 PF05728 Uncharacterised protein family (UPF0227) V469_02660 PF00293 NUDIX domain V469_02670 PF07869 Protein of unknown function (DUF1656) V469_02675 PF00529 HlyD membrane-fusion protein of T1SS V469_02675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V469_02680 PF04632 Fusaric acid resistance protein family V469_02685 PF01751 Toprim domain V469_02685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_02685 PF00986 DNA gyrase B subunit, carboxyl terminus V469_02685 PF00204 DNA gyrase B V469_02690 PF03989 DNA gyrase C-terminal domain, beta-propeller V469_02690 PF00521 DNA gyrase/topoisomerase IV, subunit A V469_02725 PF01556 DnaJ C terminal domain V469_02725 PF00684 DnaJ central domain V469_02725 PF00226 DnaJ domain V469_02730 PF00578 AhpC/TSA family V469_02755 PF01553 Acyltransferase V469_02760 PF04012 PspA/IM30 family V469_02775 PF01541 GIY-YIG catalytic domain V469_02785 PF00892 EamA-like transporter family V469_02790 PF03167 Uracil DNA glycosylase superfamily V469_02795 PF00892 EamA-like transporter family V469_02805 PF00950 ABC 3 transport family V469_02810 PF00005 ABC transporter V469_02815 PF01297 Zinc-uptake complex component A periplasmic V469_02835 PF01551 Peptidase family M23 V469_02835 PF08525 Opacity-associated protein A N-terminal motif V469_02835 PF01476 LysM domain V469_02840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain V469_02845 PF04222 Protein of unknown function (DUF416) V469_02860 PF02028 BCCT, betaine/carnitine/choline family transporter V469_02865 PF01624 MutS domain I V469_02865 PF05188 MutS domain II V469_02865 PF05190 MutS family domain IV V469_02865 PF00488 MutS domain V V469_02865 PF05192 MutS domain III V469_02885 PF02464 Competence-damaged protein V469_02890 PF00154 recA bacterial DNA recombination protein V469_02895 PF02631 RecX family V469_02900 PF01411 tRNA synthetases class II (A) V469_02900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain V469_02900 PF02272 DHHA1 domain V469_02905 PF13840 ACT domain V469_02905 PF01842 ACT domain V469_02905 PF00696 Amino acid kinase family V469_02910 PF02599 Global regulator protein family V469_02940 PF00768 D-alanyl-D-alanine carboxypeptidase V469_02945 PF09335 SNARE associated Golgi protein V469_02950 PF00571 CBS domain V469_02950 PF03471 Transporter associated domain V469_02950 PF01595 Cyclin M transmembrane N-terminal domain V469_02955 PF08264 Anticodon-binding domain of tRNA V469_02955 PF10458 Valyl tRNA synthetase tRNA binding arm V469_02955 PF00133 tRNA synthetases class I (I, L, M and V) V469_02960 PF04364 DNA polymerase III chi subunit, HolC V469_02965 PF00883 Cytosol aminopeptidase family, catalytic domain V469_02965 PF02789 Cytosol aminopeptidase family, N-terminal domain V469_02970 PF03739 Lipopolysaccharide export system permease LptF/LptG V469_02980 PF03739 Lipopolysaccharide export system permease LptF/LptG V469_02995 PF13356 Arm DNA-binding domain V469_02995 PF00589 Phage integrase family V469_03010 PF08346 AntA/AntB antirepressor V469_03010 PF10548 P22AR C-terminal domain V469_03045 PF00909 Ammonium Transporter Family V469_03050 PF05958 tRNA (Uracil-5-)-methyltransferase V469_03050 PF01938 TRAM domain V469_03055 PF00114 Pilin (bacterial filament) V469_03055 PF07963 Prokaryotic N-terminal methylation motif V469_03060 PF01026 TatD related DNase V469_03065 PF07662 Na+ dependent nucleoside transporter C-terminus V469_03065 PF07670 Nucleoside recognition V469_03065 PF01773 Na+ dependent nucleoside transporter N-terminus V469_03075 PF01791 DeoC/LacD family aldolase V469_03080 PF00591 Glycosyl transferase family, a/b domain V469_03080 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain V469_03080 PF02885 Glycosyl transferase family, helical bundle domain V469_03085 PF01676 Metalloenzyme superfamily V469_03090 PF01048 Phosphorylase superfamily V469_03095 PF08448 PAS fold V469_03095 PF08447 PAS fold V469_03095 PF05231 MASE1 V469_03095 PF00990 Diguanylate cyclase, GGDEF domain V469_03095 PF00563 EAL domain V469_03095 PF13426 PAS domain V469_03105 PF18429 Domain of unknown function (DUF5609) V469_03120 PF18073 Rubredoxin metal binding domain V469_03125 PF07238 PilZ domain V469_03130 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ V469_03135 PF00216 Bacterial DNA-binding protein V469_03150 PF01207 Dihydrouridine synthase (Dus) V469_03155 PF01475 Ferric uptake regulator family V469_03170 PF05525 Branched-chain amino acid transport protein V469_03175 PF05525 Branched-chain amino acid transport protein V469_03180 PF05175 Methyltransferase small domain V469_03185 PF00271 Helicase conserved C-terminal domain V469_03185 PF00270 DEAD/DEAH box helicase V469_03190 PF03883 Peroxide stress protein YaaA V469_03195 PF00437 Type II/IV secretion system protein V469_03200 PF00437 Type II/IV secretion system protein V469_03205 PF01168 Alanine racemase, N-terminal domain V469_03210 PF14748 Pyrroline-5-carboxylate reductase dimerisation V469_03210 PF03807 NADP oxidoreductase coenzyme F420-dependent V469_03215 PF02325 YGGT family V469_03220 PF02594 Uncharacterised ACR, YggU family COG1872 V469_03235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V469_03245 PF00132 Bacterial transferase hexapeptide (six repeats) V469_03255 PF10952 Protein of unknown function (DUF2753) V469_03260 PF00378 Enoyl-CoA hydratase/isomerase V469_03275 PF00106 short chain dehydrogenase V469_03280 PF03129 Anticodon binding domain V469_03280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) V469_03280 PF04073 Aminoacyl-tRNA editing domain V469_03285 PF00672 HAMP domain V469_03285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_03290 PF07499 RuvA, C-terminal domain V469_03290 PF01330 RuvA N terminal domain V469_03295 PF05491 RuvB C-terminal winged helix domain V469_03295 PF05496 Holliday junction DNA helicase RuvB P-loop domain V469_03295 PF17864 RuvB AAA lid domain V469_03300 PF01654 Cytochrome bd terminal oxidase subunit I V469_03305 PF02322 Cytochrome bd terminal oxidase subunit II V469_03310 PF08173 Membrane bound YbgT-like protein V469_03315 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) V469_03320 PF03061 Thioesterase superfamily V469_03325 PF01618 MotA/TolQ/ExbB proton channel family V469_03330 PF02472 Biopolymer transport protein ExbD/TolR V469_03340 PF07676 WD40-like Beta Propeller Repeat V469_03340 PF04052 TolB amino-terminal domain V469_03345 PF00691 OmpA family V469_03350 PF13174 Tetratricopeptide repeat V469_03350 PF16331 TolA binding protein trimerisation V469_03385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_03385 PF00672 HAMP domain V469_03390 PF02445 Quinolinate synthetase A protein V469_03395 PF01263 Aldose 1-epimerase V469_03400 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain V469_03400 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain V469_03405 PF02446 4-alpha-glucanotransferase V469_03410 PF02806 Alpha amylase, C-terminal all-beta domain V469_03410 PF00128 Alpha amylase, catalytic domain V469_03410 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) V469_03415 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) V469_03415 PF00128 Alpha amylase, catalytic domain V469_03420 PF01641 SelR domain V469_03430 PF00293 NUDIX domain V469_03435 PF00107 Zinc-binding dehydrogenase V469_03435 PF16884 N-terminal domain of oxidoreductase V469_03440 PF02566 OsmC-like protein V469_03445 PF01047 MarR family V469_03460 PF01037 Lrp/AsnC ligand binding domain V469_03470 PF07690 Major Facilitator Superfamily V469_03490 PF00209 Sodium:neurotransmitter symporter family V469_03500 PF00209 Sodium:neurotransmitter symporter family V469_03525 PF00155 Aminotransferase class I and II V469_03525 PF00392 Bacterial regulatory proteins, gntR family V469_03535 PF01810 LysE type translocator V469_03540 PF01177 Asp/Glu/Hydantoin racemase V469_03545 PF07732 Multicopper oxidase V469_03545 PF07731 Multicopper oxidase V469_03545 PF00394 Multicopper oxidase V469_03555 PF04074 YhcH/YjgK/YiaL V469_03560 PF00871 Acetokinase family V469_03565 PF00924 Mechanosensitive ion channel V469_03570 PF17969 L,D-transpeptidase C-terminal domain V469_03570 PF03734 L,D-transpeptidase catalytic domain V469_03575 PF00474 Sodium:solute symporter family V469_03580 PF00561 alpha/beta hydrolase fold V469_03610 PF02525 Flavodoxin-like fold V469_03615 PF03466 LysR substrate binding domain V469_03615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_03620 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ V469_03630 PF00005 ABC transporter V469_03630 PF12848 ABC transporter V469_03635 PF00571 CBS domain V469_03635 PF01380 SIS domain V469_03640 PF01957 NfeD-like C-terminal, partner-binding V469_03645 PF16200 C-terminal region of band_7 V469_03645 PF01145 SPFH domain / Band 7 family V469_03650 PF10414 Sirohaem synthase dimerisation region V469_03650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases V469_03650 PF14824 Sirohaem biosynthesis protein central V469_03655 PF01507 Phosphoadenosine phosphosulfate reductase family V469_03660 PF00009 Elongation factor Tu GTP binding domain V469_03665 PF03600 Citrate transporter V469_03665 PF02080 TrkA-C domain V469_03690 PF08447 PAS fold V469_03690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_03710 PF00005 ABC transporter V469_03725 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) V469_03740 PF00719 Inorganic pyrophosphatase V469_03745 PF02875 Mur ligase family, glutamate ligase domain V469_03745 PF01225 Mur ligase family, catalytic domain V469_03745 PF08245 Mur ligase middle domain V469_03750 PF02441 Flavoprotein V469_03755 PF00440 Bacterial regulatory proteins, tetR family V469_03760 PF00156 Phosphoribosyl transferase domain V469_03765 PF00005 ABC transporter V469_03770 PF01061 ABC-2 type transporter V469_03775 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component V469_03780 PF01869 BadF/BadG/BcrA/BcrD ATPase family V469_03800 PF02569 Pantoate-beta-alanine ligase V469_03805 PF02548 Ketopantoate hydroxymethyltransferase V469_03810 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) V469_03815 PF01743 Poly A polymerase head domain V469_03815 PF12626 Polymerase A arginine-rich C-terminus V469_03815 PF12627 Probable RNA and SrmB- binding site of polymerase A V469_03820 PF00749 tRNA synthetases class I (E and Q), catalytic domain V469_03825 PF01258 Prokaryotic dksA/traR C4-type zinc finger V469_03830 PF03749 Sugar fermentation stimulation protein RE domain V469_03830 PF17746 SfsA N-terminal OB domain V469_03840 PF04408 Helicase associated domain (HA2) V469_03840 PF00271 Helicase conserved C-terminal domain V469_03840 PF00270 DEAD/DEAH box helicase V469_03840 PF08482 ATP-dependent helicase C-terminal V469_03845 PF14814 Bifunctional transglycosylase second domain V469_03845 PF00912 Transglycosylase V469_03845 PF00905 Penicillin binding protein transpeptidase domain V469_03850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V469_03855 PF00893 Small Multidrug Resistance protein V469_03860 PF00893 Small Multidrug Resistance protein V469_03870 PF11849 Domain of unknown function (DUF3369) V469_03880 PF01569 PAP2 superfamily V469_03895 PF00202 Aminotransferase class-III V469_03900 PF00654 Voltage gated chloride channel V469_03910 PF01521 Iron-sulphur cluster biosynthesis V469_03935 PF01810 LysE type translocator V469_03940 PF02954 Bacterial regulatory protein, Fis family V469_03945 PF01207 Dihydrouridine synthase (Dus) V469_03950 PF02321 Outer membrane efflux protein V469_03955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V469_03985 PF00072 Response regulator receiver domain V469_03990 PF00854 POT family V469_03995 PF00483 Nucleotidyl transferase V469_04005 PF00459 Inositol monophosphatase family V469_04010 PF03795 YCII-related domain V469_04015 PF04279 Intracellular septation protein A V469_04020 PF00282 Pyridoxal-dependent decarboxylase conserved domain V469_04025 PF03006 Haemolysin-III related V469_04030 PF02080 TrkA-C domain V469_04030 PF06826 Predicted Permease Membrane Region V469_04045 PF01584 CheW-like domain V469_04045 PF00072 Response regulator receiver domain V469_04050 PF13472 GDSL-like Lipase/Acylhydrolase family V469_04055 PF00005 ABC transporter V469_04065 PF01370 NAD dependent epimerase/dehydratase family V469_04065 PF08338 Domain of unknown function (DUF1731) V469_04070 PF00563 EAL domain V469_04070 PF12792 CSS motif domain associated with EAL V469_04075 PF00155 Aminotransferase class I and II V469_04080 PF04389 Peptidase family M28 V469_04080 PF01483 Proprotein convertase P-domain V469_04085 PF02390 Putative methyltransferase V469_04090 PF04320 Protein with unknown function (DUF469) V469_04095 PF04960 Glutaminase V469_04100 PF00581 Rhodanese-like domain V469_04105 PF00082 Subtilase family V469_04105 PF05922 Peptidase inhibitor I9 V469_04110 PF06004 Bacterial protein of unknown function (DUF903) V469_04115 PF00664 ABC transporter transmembrane region V469_04115 PF00005 ABC transporter V469_04120 PF00561 alpha/beta hydrolase fold V469_04140 PF05547 Immune inhibitor A peptidase M6 V469_04140 PF00801 PKD domain V469_04145 PF06877 Regulator of ribonuclease activity B V469_04150 PF00990 Diguanylate cyclase, GGDEF domain V469_04150 PF00563 EAL domain V469_04150 PF03707 Bacterial signalling protein N terminal repeat V469_04170 PF09905 DNA-binding protein VF530 V469_04175 PF02666 Phosphatidylserine decarboxylase V469_04180 PF03193 RsgA GTPase V469_04185 PF00929 Exonuclease V469_04205 PF00313 'Cold-shock' DNA-binding domain V469_04215 PF00672 HAMP domain V469_04215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_04220 PF00749 tRNA synthetases class I (E and Q), catalytic domain V469_04260 PF00704 Glycosyl hydrolases family 18 V469_04260 PF06483 Chitinase C V469_04275 PF02472 Biopolymer transport protein ExbD/TolR V469_04280 PF01618 MotA/TolQ/ExbB proton channel family V469_04285 PF01618 MotA/TolQ/ExbB proton channel family V469_04295 PF07715 TonB-dependent Receptor Plug Domain V469_04295 PF00593 TonB dependent receptor V469_04300 PF00528 Binding-protein-dependent transport system inner membrane component V469_04305 PF00528 Binding-protein-dependent transport system inner membrane component V469_04305 PF12911 N-terminal TM domain of oligopeptide transport permease C V469_04315 PF00005 ABC transporter V469_04315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V469_04320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V469_04320 PF00005 ABC transporter V469_04330 PF01546 Peptidase family M20/M25/M40 V469_04330 PF07687 Peptidase dimerisation domain V469_04335 PF00156 Phosphoribosyl transferase domain V469_04345 PF07417 Sigma factor-binding transcriptional regulator Crl V469_04350 PF01472 PUA domain V469_04350 PF00696 Amino acid kinase family V469_04355 PF00171 Aldehyde dehydrogenase family V469_04365 PF00582 Universal stress protein family V469_04380 PF01568 Molydopterin dinucleotide binding domain V469_04380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain V469_04380 PF00384 Molybdopterin oxidoreductase V469_04380 PF04324 BFD-like [2Fe-2S] binding domain V469_04385 PF14824 Sirohaem biosynthesis protein central V469_04385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases V469_04385 PF10414 Sirohaem synthase dimerisation region V469_04395 PF00005 ABC transporter V469_04400 PF00528 Binding-protein-dependent transport system inner membrane component V469_04405 PF00005 ABC transporter V469_04410 PF01077 Nitrite and sulphite reductase 4Fe-4S domain V469_04410 PF18267 Rubredoxin NAD+ reductase C-terminal domain V469_04410 PF13806 Rieske-like [2Fe-2S] domain V469_04410 PF07992 Pyridine nucleotide-disulphide oxidoreductase V469_04410 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain V469_04410 PF04324 BFD-like [2Fe-2S] binding domain V469_04415 PF04324 BFD-like [2Fe-2S] binding domain V469_04415 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain V469_04415 PF07992 Pyridine nucleotide-disulphide oxidoreductase V469_04415 PF13806 Rieske-like [2Fe-2S] domain V469_04415 PF01077 Nitrite and sulphite reductase 4Fe-4S domain V469_04415 PF18267 Rubredoxin NAD+ reductase C-terminal domain V469_04420 PF00294 pfkB family carbohydrate kinase V469_04425 PF04227 Indigoidine synthase A like protein V469_04430 PF00194 Eukaryotic-type carbonic anhydrase V469_04435 PF03150 Di-haem cytochrome c peroxidase V469_04435 PF00034 Cytochrome c V469_04470 PF00550 Phosphopantetheine attachment site V469_04475 PF00550 Phosphopantetheine attachment site V469_04485 PF13193 AMP-binding enzyme C-terminal domain V469_04485 PF00501 AMP-binding enzyme V469_04490 PF07977 FabA-like domain V469_04500 PF00221 Aromatic amino acid lyase V469_04525 PF00109 Beta-ketoacyl synthase, N-terminal domain V469_04525 PF02801 Beta-ketoacyl synthase, C-terminal domain V469_04540 PF00109 Beta-ketoacyl synthase, N-terminal domain V469_04540 PF02801 Beta-ketoacyl synthase, C-terminal domain V469_04550 PF00994 Probable molybdopterin binding domain V469_04560 PF06738 Putative threonine/serine exporter V469_04565 PF12821 Threonine/Serine exporter, ThrE V469_04570 PF00186 Dihydrofolate reductase V469_04575 PF00571 CBS domain V469_04575 PF00005 ABC transporter V469_04580 PF00528 Binding-protein-dependent transport system inner membrane component V469_04585 PF04069 Substrate binding domain of ABC-type glycine betaine transport system V469_04590 PF01507 Phosphoadenosine phosphosulfate reductase family V469_04595 PF01077 Nitrite and sulphite reductase 4Fe-4S domain V469_04595 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain V469_04600 PF00175 Oxidoreductase NAD-binding domain V469_04600 PF00258 Flavodoxin V469_04600 PF00667 FAD binding domain V469_04605 PF02567 Phenazine biosynthesis-like protein V469_04610 PF00152 tRNA synthetases class II (D, K and N) V469_04610 PF01336 OB-fold nucleic acid binding domain V469_04615 PF00472 RF-1 domain V469_04615 PF03462 PCRF domain V469_04620 PF02743 Cache domain V469_04620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_04620 PF00672 HAMP domain V469_04625 PF03616 Sodium/glutamate symporter V469_04630 PF00710 Asparaginase, N-terminal V469_04630 PF17763 Glutaminase/Asparaginase C-terminal domain V469_04635 PF07023 Protein of unknown function (DUF1315) V469_04640 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain V469_04640 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain V469_04655 PF01343 Peptidase family S49 V469_04660 PF07992 Pyridine nucleotide-disulphide oxidoreductase V469_04660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family V469_04665 PF00881 Nitroreductase family V469_04670 PF14602 Hexapeptide repeat of succinyl-transferase V469_04670 PF12464 Maltose acetyltransferase V469_04675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain V469_04675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain V469_04675 PF01842 ACT domain V469_04685 PF08240 Alcohol dehydrogenase GroES-like domain V469_04685 PF00107 Zinc-binding dehydrogenase V469_04690 PF03466 LysR substrate binding domain V469_04690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_04695 PF02378 Phosphotransferase system, EIIC V469_04695 PF00367 phosphotransferase system, EIIB V469_04695 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 V469_04700 PF00474 Sodium:solute symporter family V469_04710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain V469_04710 PF00289 Biotin carboxylase, N-terminal domain V469_04710 PF02785 Biotin carboxylase C-terminal domain V469_04715 PF00364 Biotin-requiring enzyme V469_04720 PF01220 Dehydroquinase class II V469_04730 PF00501 AMP-binding enzyme V469_04730 PF16177 Acetyl-coenzyme A synthetase N-terminus V469_04730 PF13193 AMP-binding enzyme C-terminal domain V469_04740 PF00563 EAL domain V469_04740 PF03707 Bacterial signalling protein N terminal repeat V469_04740 PF00990 Diguanylate cyclase, GGDEF domain V469_04740 PF13188 PAS domain V469_04760 PF02613 Nitrate reductase delta subunit V469_04775 PF00464 Serine hydroxymethyltransferase V469_04790 PF03477 ATP cone domain V469_04795 PF01872 RibD C-terminal domain V469_04795 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region V469_04800 PF00677 Lumazine binding domain V469_04805 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase V469_04805 PF00925 GTP cyclohydrolase II V469_04815 PF00885 6,7-dimethyl-8-ribityllumazine synthase V469_04820 PF01029 NusB family V469_04825 PF00586 AIR synthase related protein, N-terminal domain V469_04825 PF02769 AIR synthase related protein, C-terminal domain V469_04830 PF04608 Phosphatidylglycerophosphatase A V469_04835 PF00005 ABC transporter V469_04835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V469_04840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V469_04850 PF12911 N-terminal TM domain of oligopeptide transport permease C V469_04850 PF00528 Binding-protein-dependent transport system inner membrane component V469_04855 PF02780 Transketolase, C-terminal domain V469_04855 PF02779 Transketolase, pyrimidine binding domain V469_04855 PF13292 1-deoxy-D-xylulose-5-phosphate synthase V469_04860 PF00348 Polyprenyl synthetase V469_04865 PF02609 Exonuclease VII small subunit V469_04870 PF01618 MotA/TolQ/ExbB proton channel family V469_04875 PF00691 OmpA family V469_04875 PF13677 Membrane MotB of proton-channel complex MotA/MotB V469_04880 PF03449 Transcription elongation factor, N-terminal V469_04880 PF01272 Transcription elongation factor, GreA/GreB, C-term V469_04890 PF01985 CRS1 / YhbY (CRM) domain V469_04895 PF01728 FtsJ-like methyltransferase V469_04900 PF01434 Peptidase family M41 V469_04900 PF06480 FtsH Extracellular V469_04900 PF00004 ATPase family associated with various cellular activities (AAA) V469_04900 PF17862 AAA+ lid domain V469_04905 PF00809 Pterin binding enzyme V469_04910 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III V469_04910 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I V469_04910 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain V469_04910 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II V469_04915 PF00121 Triosephosphate isomerase V469_04920 PF03840 Preprotein translocase SecG subunit V469_04935 PF17384 RimP C-terminal SH3 domain V469_04935 PF02576 RimP N-terminal domain V469_04940 PF08529 NusA N-terminal domain V469_04940 PF13184 NusA-like KH domain V469_04940 PF00575 S1 RNA binding domain V469_04945 PF00009 Elongation factor Tu GTP binding domain V469_04945 PF11987 Translation-initiation factor 2 V469_04945 PF08364 Bacterial translation initiation factor IF-2 associated region V469_04945 PF04760 Translation initiation factor IF-2, N-terminal region V469_04950 PF02033 Ribosome-binding factor A V469_04955 PF16198 tRNA pseudouridylate synthase B C-terminal domain V469_04955 PF01509 TruB family pseudouridylate synthase (N terminal domain) V469_04955 PF09157 Pseudouridine synthase II TruB, C-terminal V469_04960 PF00312 Ribosomal protein S15 V469_04965 PF01138 3' exoribonuclease family, domain 1 V469_04965 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain V469_04965 PF03725 3' exoribonuclease family, domain 2 V469_04965 PF00575 S1 RNA binding domain V469_04965 PF00013 KH domain V469_04975 PF03707 Bacterial signalling protein N terminal repeat V469_04975 PF00990 Diguanylate cyclase, GGDEF domain V469_04975 PF00563 EAL domain V469_04980 PF02635 DsrE/DsrF-like family V469_04990 PF00206 Lyase V469_04990 PF10415 Fumarase C C-terminus V469_04995 PF03575 Peptidase family S51 V469_05000 PF13722 5TM C-terminal transporter carbon starvation CstA V469_05000 PF02554 Carbon starvation protein CstA V469_05005 PF04397 LytTr DNA-binding domain V469_05005 PF00072 Response regulator receiver domain V469_05015 PF00196 Bacterial regulatory proteins, luxR family V469_05015 PF00072 Response regulator receiver domain V469_05020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_05020 PF00512 His Kinase A (phospho-acceptor) domain V469_05020 PF00989 PAS fold V469_05025 PF13247 4Fe-4S dicluster domain V469_05030 PF03916 Polysulphide reductase, NrfD V469_05035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain V469_05035 PF00384 Molybdopterin oxidoreductase V469_05035 PF01568 Molydopterin dinucleotide binding domain V469_05070 PF17969 L,D-transpeptidase C-terminal domain V469_05070 PF03734 L,D-transpeptidase catalytic domain V469_05080 PF01523 Putative modulator of DNA gyrase V469_05085 PF01523 Putative modulator of DNA gyrase V469_05090 PF00258 Flavodoxin V469_05095 PF00589 Phage integrase family V469_05095 PF02899 Phage integrase, N-terminal SAM-like domain V469_05100 PF01741 Large-conductance mechanosensitive channel, MscL V469_05105 PF13098 Thioredoxin-like domain V469_05105 PF10411 Disulfide bond isomerase protein N-terminus V469_05110 PF02272 DHHA1 domain V469_05110 PF17768 RecJ OB domain V469_05110 PF01368 DHH family V469_05115 PF13411 MerR HTH family regulatory protein V469_05130 PF02508 Rnf-Nqr subunit, membrane protein V469_05135 PF06821 Serine hydrolase V469_05145 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family V469_05145 PF04055 Radical SAM superfamily V469_05155 PF03099 Biotin/lipoate A/B protein ligase family V469_05160 PF04359 Protein of unknown function (DUF493) V469_05165 PF07943 Penicillin-binding protein 5, C-terminal domain V469_05165 PF00768 D-alanyl-D-alanine carboxypeptidase V469_05170 PF03330 Lytic transglycolase V469_05170 PF05036 Sporulation related domain V469_05175 PF13406 Transglycosylase SLT domain V469_05185 PF01098 Cell cycle protein V469_05190 PF00905 Penicillin binding protein transpeptidase domain V469_05190 PF03717 Penicillin-binding Protein dimerisation domain V469_05195 PF02590 Predicted SPOUT methyltransferase V469_05205 PF01467 Cytidylyltransferase-like V469_05220 PF13603 Leucyl-tRNA synthetase, Domain 2 V469_05220 PF00133 tRNA synthetases class I (I, L, M and V) V469_05220 PF08264 Anticodon-binding domain of tRNA V469_05225 PF07295 Zinc-ribbon containing domain V469_05230 PF00795 Carbon-nitrogen hydrolase V469_05235 PF00571 CBS domain V469_05235 PF03471 Transporter associated domain V469_05240 PF02130 Uncharacterized protein family UPF0054 V469_05245 PF02562 PhoH-like protein V469_05250 PF00919 Uncharacterized protein family UPF0004 V469_05250 PF01938 TRAM domain V469_05250 PF04055 Radical SAM superfamily V469_05255 PF01494 FAD binding domain V469_05260 PF00857 Isochorismatase family V469_05265 PF00313 'Cold-shock' DNA-binding domain V469_05270 PF00990 Diguanylate cyclase, GGDEF domain V469_05270 PF05230 MASE2 domain V469_05285 PF13419 Haloacid dehalogenase-like hydrolase V469_05295 PF08448 PAS fold V469_05295 PF00990 Diguanylate cyclase, GGDEF domain V469_05305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain V469_05305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain V469_05315 PF09997 Predicted membrane protein (DUF2238) V469_05320 PF09285 Elongation factor P, C-terminal V469_05320 PF01132 Elongation factor P (EF-P) OB domain V469_05320 PF08207 Elongation factor P (EF-P) KOW-like domain V469_05330 PF00478 IMP dehydrogenase / GMP reductase domain V469_05340 PF08521 Two-component sensor kinase N-terminal V469_05340 PF00512 His Kinase A (phospho-acceptor) domain V469_05340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_05345 PF00072 Response regulator receiver domain V469_05345 PF00486 Transcriptional regulatory protein, C terminal V469_05365 PF00501 AMP-binding enzyme V469_05380 PF06224 Winged helix DNA-binding domain V469_05400 PF02313 Fumarate reductase subunit D V469_05405 PF02300 Fumarate reductase subunit C V469_05410 PF13085 2Fe-2S iron-sulfur cluster binding domain V469_05410 PF13183 4Fe-4S dicluster domain V469_05415 PF02910 Fumarate reductase flavoprotein C-term V469_05415 PF00890 FAD binding domain V469_05420 PF00672 HAMP domain V469_05420 PF02743 Cache domain V469_05420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_05425 PF03009 Glycerophosphoryl diester phosphodiesterase family V469_05430 PF00924 Mechanosensitive ion channel V469_05430 PF12795 Mechanosensitive ion channel porin domain V469_05430 PF12794 Mechanosensitive ion channel inner membrane domain 1 V469_05440 PF01551 Peptidase family M23 V469_05440 PF01476 LysM domain V469_05440 PF08525 Opacity-associated protein A N-terminal motif V469_05455 PF03466 LysR substrate binding domain V469_05455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_05470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_05470 PF00672 HAMP domain V469_05470 PF02743 Cache domain V469_05475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_05475 PF03466 LysR substrate binding domain V469_05480 PF17092 Penicillin-binding protein OB-like domain V469_05480 PF00912 Transglycosylase V469_05480 PF00905 Penicillin binding protein transpeptidase domain V469_05505 PF03958 Bacterial type II/III secretion system short domain V469_05505 PF07660 Secretin and TonB N terminus short domain V469_05505 PF00263 Bacterial type II and III secretion system protein V469_05505 PF11741 AMIN domain V469_05510 PF01202 Shikimate kinase V469_05515 PF01761 3-dehydroquinate synthase V469_05525 PF02086 D12 class N6 adenine-specific DNA methyltransferase V469_05530 PF00834 Ribulose-phosphate 3 epimerase family V469_05535 PF13419 Haloacid dehalogenase-like hydrolase V469_05540 PF00579 tRNA synthetases class I (W and Y) V469_05550 PF00117 Glutamine amidotransferase class-I V469_05555 PF00202 Aminotransferase class-III V469_05560 PF04958 Arginine N-succinyltransferase beta subunit V469_05565 PF00171 Aldehyde dehydrogenase family V469_05575 PF13419 Haloacid dehalogenase-like hydrolase V469_05580 PF07690 Major Facilitator Superfamily V469_05585 PF10371 Domain of unknown function V469_05585 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II V469_05585 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase V469_05585 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg V469_05585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain V469_05595 PF00128 Alpha amylase, catalytic domain V469_05595 PF16657 Maltogenic Amylase, C-terminal domain V469_05615 PF01048 Phosphorylase superfamily V469_05620 PF04973 Nicotinamide mononucleotide transporter V469_05625 PF02080 TrkA-C domain V469_05625 PF03600 Citrate transporter V469_05670 PF01926 50S ribosome-binding GTPase V469_05670 PF06071 Protein of unknown function (DUF933) V469_05675 PF01195 Peptidyl-tRNA hydrolase V469_05680 PF02872 5'-nucleotidase, C-terminal domain V469_05680 PF00149 Calcineurin-like phosphoesterase V469_05685 PF14572 Phosphoribosyl synthetase-associated domain V469_05685 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase V469_05695 PF08544 GHMP kinases C terminal V469_05695 PF00288 GHMP kinases N terminal domain V469_05700 PF03550 Outer membrane lipoprotein LolB V469_05705 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain V469_05705 PF01488 Shikimate / quinate 5-dehydrogenase V469_05705 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain V469_05710 PF03462 PCRF domain V469_05710 PF00472 RF-1 domain V469_05715 PF13847 Methyltransferase domain V469_05715 PF17827 PrmC N-terminal domain V469_05725 PF13369 Transglutaminase-like superfamily V469_05730 PF00793 DAHP synthetase I family V469_05735 PF00375 Sodium:dicarboxylate symporter family V469_05740 PF01228 Glycine radical V469_05745 PF03167 Uracil DNA glycosylase superfamily V469_05760 PF00923 Transaldolase/Fructose-6-phosphate aldolase V469_05765 PF01235 Sodium:alanine symporter family V469_05770 PF01841 Transglutaminase-like superfamily V469_05770 PF13559 Domain of unknown function (DUF4129) V469_05770 PF11992 Domain of unknown function (DUF3488) V469_05780 PF07726 ATPase family associated with various cellular activities (AAA) V469_05780 PF17863 AAA lid domain V469_05785 PF00144 Beta-lactamase V469_05790 PF00854 POT family V469_05795 PF03652 Holliday junction resolvase V469_05800 PF02622 Uncharacterized ACR, COG1678 V469_05805 PF00672 HAMP domain V469_05805 PF12729 Four helix bundle sensory module for signal transduction V469_05805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_05810 PF02951 Prokaryotic glutathione synthetase, N-terminal domain V469_05810 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain V469_05815 PF04452 RNA methyltransferase V469_05820 PF04231 Endonuclease I V469_05825 PF17283 SprT-like zinc ribbon domain V469_05825 PF10263 SprT-like family V469_05830 PF02773 S-adenosylmethionine synthetase, C-terminal domain V469_05830 PF02772 S-adenosylmethionine synthetase, central domain V469_05830 PF00438 S-adenosylmethionine synthetase, N-terminal domain V469_05835 PF00456 Transketolase, thiamine diphosphate binding domain V469_05835 PF02779 Transketolase, pyrimidine binding domain V469_05835 PF02780 Transketolase, C-terminal domain V469_05860 PF01042 Endoribonuclease L-PSP V469_05865 PF01965 DJ-1/PfpI family V469_05875 PF03702 Anhydro-N-acetylmuramic acid kinase V469_05890 PF01551 Peptidase family M23 V469_05890 PF08525 Opacity-associated protein A N-terminal motif V469_05890 PF01476 LysM domain V469_05895 PF00579 tRNA synthetases class I (W and Y) V469_05900 PF01204 Trehalase V469_05910 PF01161 Phosphatidylethanolamine-binding protein V469_05920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_05920 PF03466 LysR substrate binding domain V469_05930 PF00155 Aminotransferase class I and II V469_05935 PF07690 Major Facilitator Superfamily V469_05940 PF03466 LysR substrate binding domain V469_05940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_05945 PF00106 short chain dehydrogenase V469_05950 PF01343 Peptidase family S49 V469_05950 PF08496 Peptidase family S49 N-terminal V469_05955 PF04996 Succinylarginine dihydrolase V469_05960 PF01131 DNA topoisomerase V469_05960 PF01396 Topoisomerase DNA binding C4 zinc finger V469_05960 PF08272 Topoisomerase I zinc-ribbon-like V469_05960 PF01751 Toprim domain V469_05975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_05975 PF08447 PAS fold V469_05985 PF00728 Glycosyl hydrolase family 20, catalytic domain V469_05985 PF02838 Glycosyl hydrolase family 20, domain 2 V469_05990 PF01869 BadF/BadG/BcrA/BcrD ATPase family V469_06000 PF00005 ABC transporter V469_06000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V469_06005 PF00005 ABC transporter V469_06005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V469_06010 PF12911 N-terminal TM domain of oligopeptide transport permease C V469_06010 PF00528 Binding-protein-dependent transport system inner membrane component V469_06015 PF00528 Binding-protein-dependent transport system inner membrane component V469_06020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V469_06025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_06025 PF09308 LuxQ, periplasmic V469_06025 PF00072 Response regulator receiver domain V469_06025 PF00512 His Kinase A (phospho-acceptor) domain V469_06045 PF10725 Protein of unknown function (DUF2517) V469_06055 PF05114 Protein of unknown function (DUF692) V469_06075 PF13426 PAS domain V469_06075 PF08447 PAS fold V469_06075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_06090 PF04632 Fusaric acid resistance protein family V469_06095 PF03454 MoeA C-terminal region (domain IV) V469_06095 PF03453 MoeA N-terminal region (domain I and II) V469_06095 PF00994 Probable molybdopterin binding domain V469_06100 PF12804 MobA-like NTP transferase domain V469_06105 PF00005 ABC transporter V469_06110 PF00528 Binding-protein-dependent transport system inner membrane component V469_06115 PF12849 PBP superfamily domain V469_06120 PF00072 Response regulator receiver domain V469_06120 PF02954 Bacterial regulatory protein, Fis family V469_06120 PF00158 Sigma-54 interaction domain V469_06125 PF00512 His Kinase A (phospho-acceptor) domain V469_06125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_06125 PF00989 PAS fold V469_06130 PF12727 PBP superfamily domain V469_06130 PF12728 Helix-turn-helix domain V469_06135 PF02634 FdhD/NarQ family V469_06175 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region V469_06175 PF01568 Molydopterin dinucleotide binding domain V469_06175 PF00384 Molybdopterin oxidoreductase V469_06175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain V469_06175 PF12838 4Fe-4S dicluster domain V469_06175 PF12838 4Fe-4S dicluster domain V469_06175 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region V469_06175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain V469_06175 PF00384 Molybdopterin oxidoreductase V469_06175 PF01568 Molydopterin dinucleotide binding domain V469_06180 PF13247 4Fe-4S dicluster domain V469_06190 PF00072 Response regulator receiver domain V469_06195 PF03949 Malic enzyme, NAD binding domain V469_06195 PF00390 Malic enzyme, N-terminal domain V469_06200 PF05433 Glycine zipper 2TM domain V469_06200 PF16998 17 kDa outer membrane surface antigen V469_06210 PF00860 Permease family V469_06215 PF10282 Lactonase, 7-bladed beta-propeller V469_06225 PF12794 Mechanosensitive ion channel inner membrane domain 1 V469_06225 PF00924 Mechanosensitive ion channel V469_06225 PF12795 Mechanosensitive ion channel porin domain V469_06230 PF00224 Pyruvate kinase, barrel domain V469_06230 PF02887 Pyruvate kinase, alpha/beta domain V469_06240 PF04151 Bacterial pre-peptidase C-terminal domain V469_06240 PF04389 Peptidase family M28 V469_06245 PF02254 TrkA-N domain V469_06245 PF00999 Sodium/hydrogen exchanger family V469_06260 PF04381 Putative exonuclease, RdgC V469_06275 PF13476 AAA domain V469_06290 PF01292 Prokaryotic cytochrome b561 V469_06300 PF00990 Diguanylate cyclase, GGDEF domain V469_06300 PF17151 Periplasmic sensor domain V469_06305 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 V469_06310 PF05524 PEP-utilising enzyme, N-terminal V469_06310 PF00391 PEP-utilising enzyme, mobile domain V469_06310 PF02896 PEP-utilising enzyme, TIM barrel domain V469_06315 PF00381 PTS HPr component phosphorylation site V469_06320 PF00291 Pyridoxal-phosphate dependent enzyme V469_06325 PF10431 C-terminal, D2-small domain, of ClpB protein V469_06325 PF17871 AAA lid domain V469_06325 PF07724 AAA domain (Cdc48 subfamily) V469_06325 PF00004 ATPase family associated with various cellular activities (AAA) V469_06325 PF02861 Clp amino terminal domain, pathogenicity island component V469_06335 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III V469_06335 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal V469_06340 PF01980 tRNA-methyltransferase O V469_06340 PF18389 TrmO C-terminal domain V469_06360 PF00664 ABC transporter transmembrane region V469_06360 PF00005 ABC transporter V469_06365 PF00005 ABC transporter V469_06365 PF00664 ABC transporter transmembrane region V469_06380 PF00486 Transcriptional regulatory protein, C terminal V469_06380 PF00072 Response regulator receiver domain V469_06395 PF03737 Aldolase/RraA V469_06410 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) V469_06415 PF00588 SpoU rRNA Methylase family V469_06420 PF03447 Homoserine dehydrogenase, NAD binding domain V469_06420 PF01842 ACT domain V469_06420 PF00696 Amino acid kinase family V469_06420 PF00742 Homoserine dehydrogenase V469_06420 PF13840 ACT domain V469_06425 PF00288 GHMP kinases N terminal domain V469_06425 PF08544 GHMP kinases C terminal V469_06430 PF14821 Threonine synthase N terminus V469_06430 PF00291 Pyridoxal-phosphate dependent enzyme V469_06435 PF13474 SnoaL-like domain V469_06450 PF00005 ABC transporter V469_06450 PF12848 ABC transporter V469_06470 PF01048 Phosphorylase superfamily V469_06485 PF00072 Response regulator receiver domain V469_06485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_06485 PF00497 Bacterial extracellular solute-binding proteins, family 3 V469_06485 PF01627 Hpt domain V469_06485 PF00989 PAS fold V469_06485 PF00512 His Kinase A (phospho-acceptor) domain V469_06490 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase V469_06500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase V469_06500 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase V469_06505 PF02690 Na+/Pi-cotransporter V469_06515 PF13520 Amino acid permease V469_06525 PF00324 Amino acid permease V469_06535 PF00202 Aminotransferase class-III V469_06540 PF00171 Aldehyde dehydrogenase family V469_06545 PF01381 Helix-turn-helix V469_06545 PF07883 Cupin domain V469_06550 PF01266 FAD dependent oxidoreductase V469_06565 PF00816 H-NS histone family V469_06570 PF00793 DAHP synthetase I family V469_06575 PF04954 Siderophore-interacting protein V469_06575 PF08021 Siderophore-interacting FAD-binding domain V469_06580 PF02321 Outer membrane efflux protein V469_06585 PF02687 FtsX-like permease family V469_06585 PF00005 ABC transporter V469_06585 PF12704 MacB-like periplasmic core domain V469_06590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V469_06600 PF01368 DHH family V469_06600 PF02833 DHHA2 domain V469_06610 PF02463 RecF/RecN/SMC N terminal domain V469_06615 PF01513 ATP-NAD kinase V469_06620 PF01025 GrpE V469_06625 PF00012 Hsp70 protein V469_06630 PF00684 DnaJ central domain V469_06630 PF01556 DnaJ C terminal domain V469_06630 PF00226 DnaJ domain V469_06635 PF11471 Maltoporin periplasmic N-terminal extension V469_06635 PF02264 LamB porin V469_06640 PF00294 pfkB family carbohydrate kinase V469_06645 PF02378 Phosphotransferase system, EIIC V469_06645 PF00367 phosphotransferase system, EIIB V469_06650 PF00251 Glycosyl hydrolases family 32 N-terminal domain V469_06650 PF08244 Glycosyl hydrolases family 32 C terminal V469_06655 PF00356 Bacterial regulatory proteins, lacI family V469_06655 PF13407 Periplasmic binding protein domain V469_06660 PF02308 MgtC family V469_06675 PF01022 Bacterial regulatory protein, arsR family V469_06680 PF04143 Sulphur transport V469_06695 PF00873 AcrB/AcrD/AcrF family V469_06700 PF00990 Diguanylate cyclase, GGDEF domain V469_06700 PF00563 EAL domain V469_06700 PF03707 Bacterial signalling protein N terminal repeat V469_06705 PF10437 Bacterial lipoate protein ligase C-terminus V469_06705 PF03099 Biotin/lipoate A/B protein ligase family V469_06725 PF00873 AcrB/AcrD/AcrF family V469_06730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V469_06730 PF00529 HlyD membrane-fusion protein of T1SS V469_06740 PF00873 AcrB/AcrD/AcrF family V469_06745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V469_06750 PF03372 Endonuclease/Exonuclease/phosphatase family V469_06765 PF07690 Major Facilitator Superfamily V469_06770 PF02424 ApbE family V469_06775 PF00127 Copper binding proteins, plastocyanin/azurin family V469_06790 PF01156 Inosine-uridine preferring nucleoside hydrolase V469_06800 PF13442 Cytochrome C oxidase, cbb3-type, subunit III V469_06800 PF00034 Cytochrome c V469_06810 PF06481 COX Aromatic Rich Motif V469_06810 PF00116 Cytochrome C oxidase subunit II, periplasmic domain V469_06815 PF00115 Cytochrome C and Quinol oxidase polypeptide I V469_06820 PF00510 Cytochrome c oxidase subunit III V469_06825 PF03626 Prokaryotic Cytochrome C oxidase subunit IV V469_06830 PF01040 UbiA prenyltransferase family V469_06835 PF07690 Major Facilitator Superfamily V469_06845 PF02668 Taurine catabolism dioxygenase TauD, TfdA family V469_06850 PF00528 Binding-protein-dependent transport system inner membrane component V469_06855 PF00005 ABC transporter V469_06860 PF04069 Substrate binding domain of ABC-type glycine betaine transport system V469_06870 PF07670 Nucleoside recognition V469_06870 PF07662 Na+ dependent nucleoside transporter C-terminus V469_06870 PF01773 Na+ dependent nucleoside transporter N-terminus V469_06895 PF04307 LexA-binding, inner membrane-associated putative hydrolase V469_06910 PF00291 Pyridoxal-phosphate dependent enzyme V469_06915 PF00218 Indole-3-glycerol phosphate synthase V469_06915 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase V469_06920 PF02885 Glycosyl transferase family, helical bundle domain V469_06920 PF00591 Glycosyl transferase family, a/b domain V469_06925 PF00591 Glycosyl transferase family, a/b domain V469_06925 PF02885 Glycosyl transferase family, helical bundle domain V469_06925 PF00117 Glutamine amidotransferase class-I V469_06930 PF00425 chorismate binding enzyme V469_06930 PF04715 Anthranilate synthase component I, N terminal region V469_06935 PF02811 PHP domain V469_06940 PF01300 Telomere recombination V469_06945 PF02616 Segregation and condensation protein ScpA V469_06950 PF04079 Segregation and condensation complex subunit ScpB V469_06955 PF00849 RNA pseudouridylate synthase V469_06955 PF01479 S4 domain V469_06980 PF08361 MAATS-type transcriptional repressor, C-terminal region V469_06980 PF00440 Bacterial regulatory proteins, tetR family V469_06985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V469_06985 PF00529 HlyD membrane-fusion protein of T1SS V469_06990 PF00873 AcrB/AcrD/AcrF family V469_06995 PF02321 Outer membrane efflux protein V469_07000 PF16363 GDP-mannose 4,6 dehydratase V469_07005 PF04321 RmlD substrate binding domain V469_07010 PF00483 Nucleotidyl transferase V469_07015 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase V469_07040 PF01370 NAD dependent epimerase/dehydratase family V469_07045 PF00953 Glycosyl transferase family 4 V469_07050 PF02719 Polysaccharide biosynthesis protein V469_07055 PF00953 Glycosyl transferase family 4 V469_07065 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain V469_07065 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain V469_07065 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain V469_07080 PF02719 Polysaccharide biosynthesis protein V469_07080 PF08485 Polysaccharide biosynthesis protein C-terminal V469_07085 PF04321 RmlD substrate binding domain V469_07090 PF02350 UDP-N-acetylglucosamine 2-epimerase V469_07100 PF02563 Polysaccharide biosynthesis/export protein V469_07100 PF10531 SLBB domain V469_07100 PF18412 Outer-membrane lipoprotein Wza C-terminal domain V469_07110 PF13807 G-rich domain on putative tyrosine kinase V469_07110 PF13614 AAA domain V469_07110 PF02706 Chain length determinant protein V469_07120 PF06082 Exopolysaccharide biosynthesis protein YbjH V469_07130 PF04337 Protein of unknown function, DUF480 V469_07135 PF04434 SWIM zinc finger V469_07135 PF00176 SNF2 family N-terminal domain V469_07135 PF00271 Helicase conserved C-terminal domain V469_07140 PF05472 DNA replication terminus site-binding protein (Ter protein) V469_07150 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family V469_07155 PF00676 Dehydrogenase E1 component V469_07160 PF02779 Transketolase, pyrimidine binding domain V469_07160 PF02780 Transketolase, C-terminal domain V469_07165 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) V469_07165 PF00364 Biotin-requiring enzyme V469_07165 PF02817 e3 binding domain V469_07170 PF00313 'Cold-shock' DNA-binding domain V469_07195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V469_07200 PF00892 EamA-like transporter family V469_07205 PF00455 DeoR C terminal sensor domain V469_07205 PF08220 DeoR-like helix-turn-helix domain V469_07215 PF04055 Radical SAM superfamily V469_07220 PF00923 Transaldolase/Fructose-6-phosphate aldolase V469_07230 PF01966 HD domain V469_07230 PF11871 Domain of unknown function (DUF3391) V469_07235 PF01479 S4 domain V469_07235 PF00849 RNA pseudouridylate synthase V469_07245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V469_07250 PF12850 Calcineurin-like phosphoesterase superfamily domain V469_07265 PF13144 Chaperone for flagella basal body P-ring formation V469_07270 PF00072 Response regulator receiver domain V469_07270 PF01584 CheW-like domain V469_07275 PF01739 CheR methyltransferase, SAM binding domain V469_07275 PF03705 CheR methyltransferase, all-alpha domain V469_07280 PF00460 Flagella basal body rod protein V469_07285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal V469_07285 PF00460 Flagella basal body rod protein V469_07295 PF00460 Flagella basal body rod protein V469_07295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal V469_07295 PF07559 Flagellar basal body protein FlaE V469_07300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal V469_07300 PF00460 Flagella basal body rod protein V469_07305 PF00460 Flagella basal body rod protein V469_07305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal V469_07310 PF02107 Flagellar L-ring protein V469_07315 PF02119 Flagellar P-ring protein V469_07320 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase V469_07320 PF10135 Rod binding protein V469_07325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal V469_07325 PF00460 Flagella basal body rod protein V469_07330 PF00669 Bacterial flagellin N-terminal helical region V469_07335 PF01769 Divalent cation transporter V469_07335 PF00571 CBS domain V469_07335 PF03448 MgtE intracellular N domain V469_07340 PF02541 Ppx/GppA phosphatase family V469_07345 PF17941 Polyphosphate kinase C-terminal domain 1 V469_07345 PF13089 Polyphosphate kinase N-terminal domain V469_07345 PF02503 Polyphosphate kinase middle domain V469_07345 PF13090 Polyphosphate kinase C-terminal domain 2 V469_07350 PF01842 ACT domain V469_07360 PF02954 Bacterial regulatory protein, Fis family V469_07360 PF00072 Response regulator receiver domain V469_07360 PF00158 Sigma-54 interaction domain V469_07365 PF00989 PAS fold V469_07365 PF00512 His Kinase A (phospho-acceptor) domain V469_07365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_07370 PF00158 Sigma-54 interaction domain V469_07370 PF02954 Bacterial regulatory protein, Fis family V469_07375 PF01784 NIF3 (NGG1p interacting factor 3) V469_07380 PF00551 Formyl transferase V469_07385 PF02769 AIR synthase related protein, C-terminal domain V469_07385 PF00586 AIR synthase related protein, N-terminal domain V469_07400 PF00308 Bacterial dnaA protein V469_07405 PF00463 Isocitrate lyase family V469_07410 PF01274 Malate synthase V469_07425 PF14437 MafB19-like deaminase V469_07430 PF00528 Binding-protein-dependent transport system inner membrane component V469_07435 PF00528 Binding-protein-dependent transport system inner membrane component V469_07450 PF01895 PhoU domain V469_07455 PF03471 Transporter associated domain V469_07455 PF01595 Cyclin M transmembrane N-terminal domain V469_07455 PF00571 CBS domain V469_07465 PF00809 Pterin binding enzyme V469_07465 PF02574 Homocysteine S-methyltransferase V469_07465 PF02965 Vitamin B12 dependent methionine synthase, activation domain V469_07465 PF02310 B12 binding domain V469_07465 PF02607 B12 binding domain V469_07470 PF13520 Amino acid permease V469_07475 PF04116 Fatty acid hydroxylase superfamily V469_07485 PF00005 ABC transporter V469_07495 PF00497 Bacterial extracellular solute-binding proteins, family 3 V469_07500 PF08448 PAS fold V469_07500 PF00990 Diguanylate cyclase, GGDEF domain V469_07505 PF07690 Major Facilitator Superfamily V469_07510 PF07730 Histidine kinase V469_07510 PF05231 MASE1 V469_07510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_07515 PF00196 Bacterial regulatory proteins, luxR family V469_07515 PF00072 Response regulator receiver domain V469_07520 PF14760 Rnk N-terminus V469_07520 PF01272 Transcription elongation factor, GreA/GreB, C-term V469_07540 PF00245 Alkaline phosphatase V469_07545 PF00245 Alkaline phosphatase V469_07550 PF01926 50S ribosome-binding GTPase V469_07555 PF07690 Major Facilitator Superfamily V469_07560 PF00850 Histone deacetylase domain V469_07570 PF13307 Helicase C-terminal domain V469_07570 PF06733 DEAD_2 V469_07585 PF00155 Aminotransferase class I and II V469_07590 PF05872 Bacterial protein of unknown function (DUF853) V469_07700 PF00816 H-NS histone family V469_07740 PF00005 ABC transporter V469_07740 PF00664 ABC transporter transmembrane region V469_07745 PF02606 Tetraacyldisaccharide-1-P 4'-kinase V469_07750 PF03966 Trm112p-like protein V469_07755 PF02348 Cytidylyltransferase V469_07760 PF00072 Response regulator receiver domain V469_07760 PF00196 Bacterial regulatory proteins, luxR family V469_07765 PF08459 UvrC Helix-hairpin-helix N-terminal V469_07765 PF02151 UvrB/uvrC motif V469_07765 PF01541 GIY-YIG catalytic domain V469_07770 PF01066 CDP-alcohol phosphatidyltransferase V469_07790 PF13356 Arm DNA-binding domain V469_07790 PF00589 Phage integrase family V469_07815 PF13007 Transposase C of IS166 homeodomain V469_07815 PF03050 Transposase IS66 family V469_07815 PF13817 IS66 C-terminal element V469_07815 PF13005 zinc-finger binding domain of transposase IS66 V469_07825 PF00171 Aldehyde dehydrogenase family V469_07835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain V469_07835 PF00205 Thiamine pyrophosphate enzyme, central domain V469_07835 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain V469_07850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold V469_07850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain V469_07855 PF13407 Periplasmic binding protein domain V469_07860 PF00005 ABC transporter V469_07865 PF02653 Branched-chain amino acid transport system / permease component V469_07870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold V469_07870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain V469_07875 PF00294 pfkB family carbohydrate kinase V469_07880 PF01261 Xylose isomerase-like TIM barrel V469_07885 PF04962 KduI/IolB family V469_07895 PF01527 Transposase V469_07900 PF00665 Integrase core domain V469_07900 PF13276 HTH-like domain V469_07935 PF01757 Acyltransferase family V469_07945 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB V469_07950 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) V469_07970 PF00037 4Fe-4S binding domain V469_07970 PF13247 4Fe-4S dicluster domain V469_07975 PF03916 Polysulphide reductase, NrfD V469_07980 PF00149 Calcineurin-like phosphoesterase V469_07990 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD V469_07995 PF01406 tRNA synthetases class I (C) catalytic domain V469_07995 PF09190 DALR domain V469_08015 PF13185 GAF domain V469_08015 PF00990 Diguanylate cyclase, GGDEF domain V469_08045 PF01169 Uncharacterized protein family UPF0016 V469_08050 PF01253 Translation initiation factor SUI1 V469_08060 PF07664 Ferrous iron transport protein B C terminus V469_08060 PF02421 Ferrous iron transport protein B V469_08060 PF07670 Nucleoside recognition V469_08075 PF00483 Nucleotidyl transferase V469_08080 PF00437 Type II/IV secretion system protein V469_08090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_08090 PF00512 His Kinase A (phospho-acceptor) domain V469_08090 PF00072 Response regulator receiver domain V469_08090 PF00497 Bacterial extracellular solute-binding proteins, family 3 V469_08090 PF01627 Hpt domain V469_08090 PF00989 PAS fold V469_08095 PF01032 FecCD transport family V469_08100 PF00005 ABC transporter V469_08105 PF00583 Acetyltransferase (GNAT) family V469_08110 PF00793 DAHP synthetase I family V469_08115 PF01219 Prokaryotic diacylglycerol kinase V469_08120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain V469_08120 PF01842 ACT domain V469_08120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain V469_08125 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) V469_08130 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) V469_08135 PF01812 5-formyltetrahydrofolate cyclo-ligase family V469_08145 PF01113 Dihydrodipicolinate reductase, N-terminus V469_08145 PF05173 Dihydrodipicolinate reductase, C-terminus V469_08150 PF00117 Glutamine amidotransferase class-I V469_08150 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain V469_08155 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain V469_08155 PF02142 MGS-like domain V469_08155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain V469_08160 PF00682 HMGL-like V469_08160 PF08502 LeuA allosteric (dimerisation) domain V469_08165 PF07759 Protein of unknown function (DUF1615) V469_08190 PF13302 Acetyltransferase (GNAT) domain V469_08195 PF00271 Helicase conserved C-terminal domain V469_08195 PF00270 DEAD/DEAH box helicase V469_08205 PF14521 Lysine-specific metallo-endopeptidase V469_08220 PF00376 MerR family regulatory protein V469_08220 PF09278 MerR, DNA binding V469_08235 PF00497 Bacterial extracellular solute-binding proteins, family 3 V469_08240 PF00528 Binding-protein-dependent transport system inner membrane component V469_08250 PF07992 Pyridine nucleotide-disulphide oxidoreductase V469_08250 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster V469_08255 PF00310 Glutamine amidotransferases class-II V469_08255 PF01493 GXGXG motif V469_08255 PF01645 Conserved region in glutamate synthase V469_08255 PF04898 Glutamate synthase central domain V469_08260 PF16199 Radical_SAM C-terminal domain V469_08260 PF04055 Radical SAM superfamily V469_08265 PF03412 Peptidase C39 family V469_08265 PF00005 ABC transporter V469_08265 PF00664 ABC transporter transmembrane region V469_08295 PF00324 Amino acid permease V469_08305 PF03618 Kinase/pyrophosphorylase V469_08310 PF02896 PEP-utilising enzyme, TIM barrel domain V469_08310 PF00391 PEP-utilising enzyme, mobile domain V469_08310 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain V469_08320 PF01915 Glycosyl hydrolase family 3 C-terminal domain V469_08320 PF00933 Glycosyl hydrolase family 3 N terminal domain V469_08320 PF14310 Fibronectin type III-like domain V469_08330 PF01483 Proprotein convertase P-domain V469_08330 PF00082 Subtilase family V469_08360 PF07969 Amidohydrolase family V469_08365 PF03180 NLPA lipoprotein V469_08370 PF01569 PAP2 superfamily V469_08375 PF11890 Domain of unknown function (DUF3410) V469_08375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain V469_08375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain V469_08380 PF02774 Semialdehyde dehydrogenase, dimerisation domain V469_08380 PF01118 Semialdehyde dehydrogenase, NAD binding domain V469_08390 PF01416 tRNA pseudouridine synthase V469_08395 PF17848 Acetyl-coA carboxylase zinc finger domain V469_08395 PF01039 Carboxyl transferase domain V469_08400 PF02875 Mur ligase family, glutamate ligase domain V469_08400 PF08245 Mur ligase middle domain V469_08405 PF05036 Sporulation related domain V469_08410 PF04358 DsrC like protein V469_08415 PF12805 FUSC-like inner membrane protein yccS V469_08420 PF01027 Inhibitor of apoptosis-promoting Bax1 V469_08440 PF00884 Sulfatase V469_08440 PF08019 Phosphoethanolamine transferase EptA/EptB V469_08450 PF03706 Lysylphosphatidylglycerol synthase TM region V469_08450 PF09924 Uncharacterised conserved protein (DUF2156) V469_08460 PF08447 PAS fold V469_08460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_08465 PF00563 EAL domain V469_08465 PF00990 Diguanylate cyclase, GGDEF domain V469_08465 PF13426 PAS domain V469_08470 PF00849 RNA pseudouridylate synthase V469_08480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V469_08485 PF04209 homogentisate 1,2-dioxygenase V469_08495 PF14497 Glutathione S-transferase, C-terminal domain V469_08495 PF02798 Glutathione S-transferase, N-terminal domain V469_08500 PF00043 Glutathione S-transferase, C-terminal domain V469_08500 PF13417 Glutathione S-transferase, N-terminal domain V469_08510 PF00733 Asparagine synthase V469_08510 PF13537 Glutamine amidotransferase domain V469_08520 PF02254 TrkA-N domain V469_08520 PF00999 Sodium/hydrogen exchanger family V469_08525 PF13344 Haloacid dehalogenase-like hydrolase V469_08530 PF00962 Adenosine/AMP deaminase V469_08535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family V469_08540 PF03471 Transporter associated domain V469_08540 PF03741 Integral membrane protein TerC family V469_08560 PF03061 Thioesterase superfamily V469_08565 PF03880 DbpA RNA binding domain V469_08565 PF00270 DEAD/DEAH box helicase V469_08565 PF00271 Helicase conserved C-terminal domain V469_08570 PF03553 Na+/H+ antiporter family V469_08570 PF13726 Na+-H+ antiporter family V469_08575 PF00929 Exonuclease V469_08580 PF12729 Four helix bundle sensory module for signal transduction V469_08580 PF00672 HAMP domain V469_08580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_08585 PF00691 OmpA family V469_08585 PF18393 MotY N-terminal domain V469_08590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V469_08595 PF10576 Iron-sulfur binding domain of endonuclease III V469_08595 PF00730 HhH-GPD superfamily base excision DNA repair protein V469_08595 PF00633 Helix-hairpin-helix motif V469_08600 PF02508 Rnf-Nqr subunit, membrane protein V469_08605 PF04205 FMN-binding domain V469_08610 PF03116 NQR2, RnfD, RnfE family V469_08615 PF10531 SLBB domain V469_08615 PF12838 4Fe-4S dicluster domain V469_08615 PF13375 RnfC Barrel sandwich hybrid domain V469_08615 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit V469_08620 PF04060 Putative Fe-S cluster V469_08625 PF02508 Rnf-Nqr subunit, membrane protein V469_08630 PF00892 EamA-like transporter family V469_08640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_08640 PF13426 PAS domain V469_08640 PF08447 PAS fold V469_08645 PF07055 Enoyl reductase FAD binding domain V469_08645 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase V469_08645 PF12241 Trans-2-enoyl-CoA reductase catalytic region V469_08650 PF03606 C4-dicarboxylate anaerobic carrier V469_08655 PF00155 Aminotransferase class I and II V469_08665 PF00462 Glutaredoxin V469_08670 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family V469_08675 PF00271 Helicase conserved C-terminal domain V469_08675 PF04851 Type III restriction enzyme, res subunit V469_08680 PF00529 HlyD membrane-fusion protein of T1SS V469_08680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V469_08685 PF11742 Protein of unknown function (DUF3302) V469_08690 PF02554 Carbon starvation protein CstA V469_08695 PF04397 LytTr DNA-binding domain V469_08695 PF00072 Response regulator receiver domain V469_08700 PF07694 5TMR of 5TMR-LYT V469_08700 PF06580 Histidine kinase V469_08705 PF01966 HD domain V469_08710 PF00171 Aldehyde dehydrogenase family V469_08710 PF00465 Iron-containing alcohol dehydrogenase V469_08720 PF01914 MarC family integral membrane protein V469_08725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V469_08730 PF00528 Binding-protein-dependent transport system inner membrane component V469_08735 PF00528 Binding-protein-dependent transport system inner membrane component V469_08735 PF12911 N-terminal TM domain of oligopeptide transport permease C V469_08740 PF00005 ABC transporter V469_08740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V469_08750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V469_08750 PF00005 ABC transporter V469_08755 PF03741 Integral membrane protein TerC family V469_08760 PF00842 Alanine racemase, C-terminal domain V469_08760 PF01168 Alanine racemase, N-terminal domain V469_08770 PF00375 Sodium:dicarboxylate symporter family V469_08785 PF01979 Amidohydrolase family V469_08795 PF00672 HAMP domain V469_08795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_08800 PF01230 HIT domain V469_08835 PF13721 SecD export protein N-terminal TM region V469_08835 PF02355 Protein export membrane protein V469_08835 PF07549 SecD/SecF GG Motif V469_08840 PF07549 SecD/SecF GG Motif V469_08840 PF02355 Protein export membrane protein V469_08850 PF05661 Protein of unknown function (DUF808) V469_08855 PF01432 Peptidase family M3 V469_08855 PF08439 Oligopeptidase F V469_08860 PF01432 Peptidase family M3 V469_08860 PF08439 Oligopeptidase F V469_08865 PF00860 Permease family V469_08870 PF05728 Uncharacterised protein family (UPF0227) V469_08875 PF07992 Pyridine nucleotide-disulphide oxidoreductase V469_08895 PF01906 Putative heavy-metal-binding V469_08905 PF10414 Sirohaem synthase dimerisation region V469_08905 PF14824 Sirohaem biosynthesis protein central V469_08905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases V469_08910 PF13187 4Fe-4S dicluster domain V469_08910 PF01077 Nitrite and sulphite reductase 4Fe-4S domain V469_08910 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain V469_08915 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B V469_08915 PF00175 Oxidoreductase NAD-binding domain V469_08920 PF17179 4Fe-4S dicluster domain V469_08925 PF01734 Patatin-like phospholipase V469_08930 PF17676 LD-carboxypeptidase C-terminal domain V469_08930 PF02016 LD-carboxypeptidase N-terminal domain V469_08935 PF00884 Sulfatase V469_08945 PF01842 ACT domain V469_08945 PF00696 Amino acid kinase family V469_08950 PF00583 Acetyltransferase (GNAT) family V469_08950 PF00696 Amino acid kinase family V469_08955 PF01625 Peptide methionine sulfoxide reductase V469_08980 PF00561 alpha/beta hydrolase fold V469_08985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V469_09005 PF02652 L-lactate permease V469_09010 PF02754 Cysteine-rich domain V469_09015 PF02589 LUD domain V469_09015 PF13183 4Fe-4S dicluster domain V469_09015 PF11870 Domain of unknown function (DUF3390) V469_09020 PF02589 LUD domain V469_09025 PF02913 FAD linked oxidases, C-terminal domain V469_09025 PF01565 FAD binding domain V469_09040 PF00005 ABC transporter V469_09050 PF07690 Major Facilitator Superfamily V469_09065 PF01593 Flavin containing amine oxidoreductase V469_09070 PF03239 Iron permease FTR1 family V469_09085 PF03350 Uncharacterized protein family, UPF0114 V469_09100 PF01740 STAS domain V469_09100 PF00916 Sulfate permease family V469_09155 PF01527 Transposase V469_09165 PF01527 Transposase V469_09175 PF13276 HTH-like domain V469_09175 PF00665 Integrase core domain V469_09175 PF13333 Integrase core domain V469_09190 PF01168 Alanine racemase, N-terminal domain V469_09190 PF00842 Alanine racemase, C-terminal domain V469_09195 PF12729 Four helix bundle sensory module for signal transduction V469_09195 PF00672 HAMP domain V469_09195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_09200 PF00990 Diguanylate cyclase, GGDEF domain V469_09200 PF00563 EAL domain V469_09200 PF03707 Bacterial signalling protein N terminal repeat V469_09205 PF00072 Response regulator receiver domain V469_09205 PF01339 CheB methylesterase V469_09210 PF03705 CheR methyltransferase, all-alpha domain V469_09210 PF01739 CheR methyltransferase, SAM binding domain V469_09215 PF01584 CheW-like domain V469_09220 PF17202 Single cache domain 3 V469_09220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_09220 PF00672 HAMP domain V469_09225 PF01584 CheW-like domain V469_09225 PF09078 CheY binding V469_09225 PF01627 Hpt domain V469_09225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_09225 PF02895 Signal transducing histidine kinase, homodimeric domain V469_09235 PF00072 Response regulator receiver domain V469_09240 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal V469_09240 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit V469_09245 PF13247 4Fe-4S dicluster domain V469_09250 PF03916 Polysulphide reductase, NrfD V469_09255 PF00374 Nickel-dependent hydrogenase V469_09260 PF01750 Hydrogenase maturation protease V469_09265 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE V469_09270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V469_09275 PF00528 Binding-protein-dependent transport system inner membrane component V469_09280 PF12911 N-terminal TM domain of oligopeptide transport permease C V469_09280 PF00528 Binding-protein-dependent transport system inner membrane component V469_09285 PF00005 ABC transporter V469_09285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V469_09290 PF08402 TOBE domain V469_09290 PF00005 ABC transporter V469_09305 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA V469_09310 PF02769 AIR synthase related protein, C-terminal domain V469_09310 PF00586 AIR synthase related protein, N-terminal domain V469_09315 PF01924 Hydrogenase formation hypA family V469_09320 PF01455 HupF/HypC family V469_09325 PF00708 Acylphosphatase V469_09325 PF17788 HypF Kae1-like domain V469_09325 PF01300 Telomere recombination V469_09325 PF07503 HypF finger V469_09330 PF00009 Elongation factor Tu GTP binding domain V469_09330 PF03144 Elongation factor Tu domain 2 V469_09330 PF09105 Elongation factor SelB, winged helix V469_09330 PF09106 Elongation factor SelB, winged helix V469_09330 PF09107 Elongation factor SelB, winged helix V469_09335 PF12390 Selenocysteine synthase N terminal V469_09335 PF03841 L-seryl-tRNA selenium transferase V469_09345 PF01750 Hydrogenase maturation protease V469_09350 PF07450 Formate hydrogenlyase maturation protein HycH V469_09355 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit V469_09360 PF12838 4Fe-4S dicluster domain V469_09365 PF00374 Nickel-dependent hydrogenase V469_09365 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit V469_09365 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit V469_09370 PF00146 NADH dehydrogenase V469_09375 PF00361 Proton-conducting membrane transporter V469_09380 PF00037 4Fe-4S binding domain V469_09380 PF12798 4Fe-4S binding domain V469_09385 PF02705 K+ potassium transporter V469_09395 PF12800 4Fe-4S binding domain V469_09395 PF13247 4Fe-4S dicluster domain V469_09400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain V469_09400 PF00384 Molybdopterin oxidoreductase V469_09400 PF01568 Molydopterin dinucleotide binding domain V469_09405 PF01568 Molydopterin dinucleotide binding domain V469_09405 PF00384 Molybdopterin oxidoreductase V469_09405 PF04879 Molybdopterin oxidoreductase Fe4S4 domain V469_09415 PF01590 GAF domain V469_09415 PF02954 Bacterial regulatory protein, Fis family V469_09415 PF00158 Sigma-54 interaction domain V469_09420 PF02634 FdhD/NarQ family V469_09425 PF02132 RecR protein V469_09425 PF13662 Toprim domain V469_09430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_09430 PF00183 Hsp90 protein V469_09435 PF05191 Adenylate kinase, active site lid V469_09440 PF00762 Ferrochelatase V469_09450 PF00294 pfkB family carbohydrate kinase V469_09465 PF03707 Bacterial signalling protein N terminal repeat V469_09465 PF00563 EAL domain V469_09465 PF00990 Diguanylate cyclase, GGDEF domain V469_09470 PF00483 Nucleotidyl transferase V469_09480 PF07273 Protein of unknown function (DUF1439) V469_09485 PF00425 chorismate binding enzyme V469_09490 PF13193 AMP-binding enzyme C-terminal domain V469_09490 PF00501 AMP-binding enzyme V469_09495 PF00550 Phosphopantetheine attachment site V469_09495 PF00857 Isochorismatase family V469_09500 PF00975 Thioesterase domain V469_09500 PF13193 AMP-binding enzyme C-terminal domain V469_09500 PF00550 Phosphopantetheine attachment site V469_09500 PF00668 Condensation domain V469_09500 PF00501 AMP-binding enzyme V469_09510 PF00501 AMP-binding enzyme V469_09510 PF13193 AMP-binding enzyme C-terminal domain V469_09510 PF00668 Condensation domain V469_09510 PF07993 Male sterility protein V469_09510 PF00550 Phosphopantetheine attachment site V469_09515 PF00668 Condensation domain V469_09515 PF13193 AMP-binding enzyme C-terminal domain V469_09515 PF00501 AMP-binding enzyme V469_09515 PF00975 Thioesterase domain V469_09515 PF00550 Phosphopantetheine attachment site V469_09520 PF01497 Periplasmic binding protein V469_09525 PF01648 4'-phosphopantetheinyl transferase superfamily V469_09525 PF17837 4'-phosphopantetheinyl transferase N-terminal domain V469_09530 PF00005 ABC transporter V469_09535 PF01032 FecCD transport family V469_09540 PF01032 FecCD transport family V469_09545 PF00593 TonB dependent receptor V469_09545 PF07715 TonB-dependent Receptor Plug Domain V469_09560 PF11143 Protein of unknown function (DUF2919) V469_09565 PF01544 CorA-like Mg2+ transporter protein V469_09575 PF01012 Electron transfer flavoprotein domain V469_09585 PF01012 Electron transfer flavoprotein domain V469_09585 PF00766 Electron transfer flavoprotein FAD-binding domain V469_09590 PF00266 Aminotransferase class-V V469_09595 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) V469_09600 PF00793 DAHP synthetase I family V469_09605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_09605 PF00672 HAMP domain V469_09610 PF04055 Radical SAM superfamily V469_09615 PF02601 Exonuclease VII, large subunit V469_09615 PF13742 OB-fold nucleic acid binding domain V469_09620 PF00892 EamA-like transporter family V469_09625 PF02472 Biopolymer transport protein ExbD/TolR V469_09630 PF01618 MotA/TolQ/ExbB proton channel family V469_09640 PF02705 K+ potassium transporter V469_09645 PF00478 IMP dehydrogenase / GMP reductase domain V469_09645 PF00571 CBS domain V469_09650 PF02540 NAD synthase V469_09650 PF00117 Glutamine amidotransferase class-I V469_09650 PF00958 GMP synthase C terminal domain V469_09655 PF00589 Phage integrase family V469_09655 PF13356 Arm DNA-binding domain V469_09715 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain V469_09715 PF12833 Helix-turn-helix domain V469_09715 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain V469_09715 PF02805 Metal binding domain of Ada V469_09730 PF05724 Thiopurine S-methyltransferase (TPMT) V469_09735 PF05193 Peptidase M16 inactive domain V469_09735 PF00675 Insulinase (Peptidase family M16) V469_09740 PF00300 Histidine phosphatase superfamily (branch 1) V469_09750 PF00892 EamA-like transporter family V469_09755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V469_09760 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain V469_09765 PF03461 TRCF domain V469_09765 PF02559 CarD-like/TRCF domain V469_09765 PF17757 UvrB interaction domain V469_09765 PF00270 DEAD/DEAH box helicase V469_09765 PF00271 Helicase conserved C-terminal domain V469_09775 PF02687 FtsX-like permease family V469_09775 PF12704 MacB-like periplasmic core domain V469_09780 PF00005 ABC transporter V469_09785 PF12704 MacB-like periplasmic core domain V469_09785 PF02687 FtsX-like permease family V469_09800 PF05697 Bacterial trigger factor protein (TF) V469_09800 PF05698 Bacterial trigger factor protein (TF) C-terminus V469_09800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase V469_09805 PF00574 Clp protease V469_09810 PF07724 AAA domain (Cdc48 subfamily) V469_09810 PF10431 C-terminal, D2-small domain, of ClpB protein V469_09810 PF06689 ClpX C4-type zinc finger V469_09815 PF00004 ATPase family associated with various cellular activities (AAA) V469_09815 PF02190 ATP-dependent protease La (LON) substrate-binding domain V469_09815 PF05362 Lon protease (S16) C-terminal proteolytic domain V469_09820 PF00216 Bacterial DNA-binding protein V469_09825 PF13145 PPIC-type PPIASE domain V469_09830 PF12848 ABC transporter V469_09830 PF00005 ABC transporter V469_09835 PF00474 Sodium:solute symporter family V469_09840 PF04341 Protein of unknown function, DUF485 V469_09855 PF00378 Enoyl-CoA hydratase/isomerase V469_09900 PF01235 Sodium:alanine symporter family V469_09910 PF06167 Glucose-regulated metallo-peptidase M90 V469_09915 PF01184 GPR1/FUN34/yaaH family V469_09930 PF09278 MerR, DNA binding V469_09930 PF00376 MerR family regulatory protein V469_09935 PF00682 HMGL-like V469_09940 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain V469_09940 PF00289 Biotin carboxylase, N-terminal domain V469_09940 PF02785 Biotin carboxylase C-terminal domain V469_09940 PF00364 Biotin-requiring enzyme V469_09945 PF00378 Enoyl-CoA hydratase/isomerase V469_09950 PF01039 Carboxyl transferase domain V469_09955 PF02770 Acyl-CoA dehydrogenase, middle domain V469_09955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain V469_09955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain V469_09960 PF00171 Aldehyde dehydrogenase family V469_09965 PF02770 Acyl-CoA dehydrogenase, middle domain V469_09965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain V469_09965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain V469_09970 PF00378 Enoyl-CoA hydratase/isomerase V469_09975 PF00378 Enoyl-CoA hydratase/isomerase V469_09980 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase V469_09980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase V469_09990 PF13520 Amino acid permease V469_09995 PF01925 Sulfite exporter TauE/SafE V469_10020 PF00239 Resolvase, N terminal domain V469_10020 PF02796 Helix-turn-helix domain of resolvase V469_10040 PF03466 LysR substrate binding domain V469_10040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_10045 PF12146 Serine aminopeptidase, S33 V469_10050 PF00326 Prolyl oligopeptidase family V469_10050 PF07676 WD40-like Beta Propeller Repeat V469_10050 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region V469_10060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_10060 PF03466 LysR substrate binding domain V469_10065 PF00248 Aldo/keto reductase family V469_10075 PF00248 Aldo/keto reductase family V469_10080 PF00990 Diguanylate cyclase, GGDEF domain V469_10080 PF07694 5TMR of 5TMR-LYT V469_10085 PF03466 LysR substrate binding domain V469_10085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_10090 PF00232 Glycosyl hydrolase family 1 V469_10110 PF01966 HD domain V469_10120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_10120 PF03466 LysR substrate binding domain V469_10125 PF01261 Xylose isomerase-like TIM barrel V469_10130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain V469_10130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold V469_10135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_10135 PF03466 LysR substrate binding domain V469_10145 PF03279 Bacterial lipid A biosynthesis acyltransferase V469_10150 PF03279 Bacterial lipid A biosynthesis acyltransferase V469_10165 PF00990 Diguanylate cyclase, GGDEF domain V469_10165 PF17151 Periplasmic sensor domain V469_10175 PF03104 DNA polymerase family B, exonuclease domain V469_10175 PF00136 DNA polymerase family B V469_10205 PF01554 MatE V469_10210 PF06786 Uncharacterised protein family (UPF0253) V469_10215 PF00677 Lumazine binding domain V469_10225 PF13419 Haloacid dehalogenase-like hydrolase V469_10230 PF02222 ATP-grasp domain V469_10230 PF01370 NAD dependent epimerase/dehydratase family V469_10235 PF00892 EamA-like transporter family V469_10240 PF02525 Flavodoxin-like fold V469_10265 PF17783 CvfB-like winged helix domain V469_10265 PF13509 S1 domain V469_10275 PF04269 Protein of unknown function, DUF440 V469_10280 PF00912 Transglycosylase V469_10285 PF04269 Protein of unknown function, DUF440 V469_10290 PF03776 Septum formation topological specificity factor MinE V469_10295 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain V469_10300 PF03775 Septum formation inhibitor MinC, C-terminal domain V469_10300 PF05209 Septum formation inhibitor MinC, N-terminal domain V469_10305 PF05166 YcgL domain V469_10310 PF13406 Transglycosylase SLT domain V469_10315 PF03315 Serine dehydratase beta chain V469_10315 PF03313 Serine dehydratase alpha chain V469_10320 PF03313 Serine dehydratase alpha chain V469_10320 PF03315 Serine dehydratase beta chain V469_10325 PF06865 Pyrimidine/purine nucleoside phosphorylase V469_10330 PF00375 Sodium:dicarboxylate symporter family V469_10335 PF00376 MerR family regulatory protein V469_10335 PF09278 MerR, DNA binding V469_10340 PF00108 Thiolase, N-terminal domain V469_10340 PF02803 Thiolase, C-terminal domain V469_10345 PF08668 HDOD domain V469_10345 PF00563 EAL domain V469_10350 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) V469_10355 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) V469_10365 PF04542 Sigma-70 region 2 V469_10365 PF08281 Sigma-70, region 4 V469_10390 PF01882 Protein of unknown function DUF58 V469_10395 PF07726 ATPase family associated with various cellular activities (AAA) V469_10395 PF17863 AAA lid domain V469_10400 PF02803 Thiolase, C-terminal domain V469_10400 PF00108 Thiolase, N-terminal domain V469_10405 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain V469_10405 PF00378 Enoyl-CoA hydratase/isomerase V469_10405 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain V469_10415 PF07152 YaeQ protein V469_10425 PF06074 Protein of unknown function (DUF935) V469_10445 PF10123 Mu-like prophage I protein V469_10455 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain V469_10455 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain V469_10460 PF00291 Pyridoxal-phosphate dependent enzyme V469_10465 PF01546 Peptidase family M20/M25/M40 V469_10465 PF07687 Peptidase dimerisation domain V469_10470 PF01979 Amidohydrolase family V469_10475 PF00696 Amino acid kinase family V469_10485 PF00892 EamA-like transporter family V469_10490 PF02625 XdhC and CoxI family V469_10490 PF13478 XdhC Rossmann domain V469_10500 PF12804 MobA-like NTP transferase domain V469_10510 PF07992 Pyridine nucleotide-disulphide oxidoreductase V469_10510 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster V469_10515 PF01979 Amidohydrolase family V469_10520 PF00941 FAD binding domain in molybdopterin dehydrogenase V469_10525 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase V469_10525 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain V469_10525 PF01799 [2Fe-2S] binding domain V469_10530 PF00860 Permease family V469_10535 PF01979 Amidohydrolase family V469_10540 PF00860 Permease family V469_10545 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase V469_10545 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain V469_10550 PF03450 CO dehydrogenase flavoprotein C-terminal domain V469_10550 PF00941 FAD binding domain in molybdopterin dehydrogenase V469_10555 PF01799 [2Fe-2S] binding domain V469_10555 PF00111 2Fe-2S iron-sulfur cluster binding domain V469_10565 PF05433 Glycine zipper 2TM domain V469_10575 PF03606 C4-dicarboxylate anaerobic carrier V469_10580 PF00501 AMP-binding enzyme V469_10580 PF13193 AMP-binding enzyme C-terminal domain V469_10585 PF01502 Phosphoribosyl-AMP cyclohydrolase V469_10585 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase V469_10590 PF00977 Histidine biosynthesis protein V469_10595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_10595 PF00512 His Kinase A (phospho-acceptor) domain V469_10595 PF01627 Hpt domain V469_10595 PF00072 Response regulator receiver domain V469_10605 PF00072 Response regulator receiver domain V469_10610 PF00977 Histidine biosynthesis protein V469_10615 PF00117 Glutamine amidotransferase class-I V469_10620 PF08645 Polynucleotide kinase 3 phosphatase V469_10620 PF00475 Imidazoleglycerol-phosphate dehydratase V469_10625 PF00155 Aminotransferase class I and II V469_10630 PF00815 Histidinol dehydrogenase V469_10635 PF01634 ATP phosphoribosyltransferase V469_10635 PF08029 HisG, C-terminal domain V469_10645 PF13307 Helicase C-terminal domain V469_10645 PF04851 Type III restriction enzyme, res subunit V469_10650 PF00814 Glycoprotease family V469_10660 PF12697 Alpha/beta hydrolase family V469_10660 PF08241 Methyltransferase domain V469_10665 PF00501 AMP-binding enzyme V469_10665 PF13193 AMP-binding enzyme C-terminal domain V469_10670 PF01612 3'-5' exonuclease V469_10670 PF00570 HRDC domain V469_10675 PF00497 Bacterial extracellular solute-binding proteins, family 3 V469_10795 PF02796 Helix-turn-helix domain of resolvase V469_10795 PF00239 Resolvase, N terminal domain V469_10805 PF00239 Resolvase, N terminal domain V469_10805 PF13408 Recombinase zinc beta ribbon domain V469_10805 PF07508 Recombinase V469_10815 PF01207 Dihydrouridine synthase (Dus) V469_10820 PF04304 Protein of unknown function (DUF454) V469_10825 PF00156 Phosphoribosyl transferase domain V469_10830 PF12169 DNA polymerase III subunits gamma and tau domain III V469_10830 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding V469_10830 PF12170 DNA polymerase III tau subunit V interacting with alpha V469_10835 PF02575 YbaB/EbfC DNA-binding family V469_10840 PF00589 Phage integrase family V469_10840 PF12167 Arm DNA-binding domain V469_10870 PF12684 PDDEXK-like domain of unknown function (DUF3799) V469_10870 PF06630 Enterobacterial exodeoxyribonuclease VIII V469_10970 PF06628 Catalase-related immune-responsive V469_10970 PF00199 Catalase V469_10980 PF00080 Copper/zinc superoxide dismutase (SODC) V469_10995 PF09669 Phage regulatory protein Rha (Phage_pRha) V469_10995 PF03374 Phage antirepressor protein KilAC domain V469_11000 PF05772 NinB protein V469_11015 PF01338 Bacillus thuringiensis toxin V469_11020 PF11798 IMS family HHH motif V469_11020 PF13438 Domain of unknown function (DUF4113) V469_11020 PF00817 impB/mucB/samB family V469_11020 PF11799 impB/mucB/samB family C-terminal domain V469_11025 PF00717 Peptidase S24-like V469_11040 PF00816 H-NS histone family V469_11195 PF00072 Response regulator receiver domain V469_11195 PF00196 Bacterial regulatory proteins, luxR family V469_11210 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold V469_11210 PF11898 Domain of unknown function (DUF3418) V469_11210 PF04408 Helicase associated domain (HA2) V469_11210 PF00270 DEAD/DEAH box helicase V469_11210 PF00271 Helicase conserved C-terminal domain V469_11225 PF01627 Hpt domain V469_11225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_11225 PF00072 Response regulator receiver domain V469_11225 PF00672 HAMP domain V469_11225 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) V469_11225 PF00512 His Kinase A (phospho-acceptor) domain V469_11230 PF00072 Response regulator receiver domain V469_11235 PF00753 Metallo-beta-lactamase superfamily V469_11245 PF02769 AIR synthase related protein, C-terminal domain V469_11245 PF00586 AIR synthase related protein, N-terminal domain V469_11270 PF10672 S-adenosylmethionine-dependent methyltransferase V469_11270 PF17785 PUA-like domain V469_11275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_11275 PF00672 HAMP domain V469_11275 PF12729 Four helix bundle sensory module for signal transduction V469_11280 PF00708 Acylphosphatase V469_11285 PF02798 Glutathione S-transferase, N-terminal domain V469_11285 PF00043 Glutathione S-transferase, C-terminal domain V469_11290 PF01588 Putative tRNA binding domain V469_11290 PF08264 Anticodon-binding domain of tRNA V469_11290 PF09334 tRNA synthetases class I (M) V469_11295 PF10609 NUBPL iron-transfer P-loop NTPase V469_11300 PF00485 Phosphoribulokinase / Uridine kinase family V469_11305 PF00692 dUTPase V469_11310 PF01384 Phosphate transporter family V469_11315 PF00575 S1 RNA binding domain V469_11315 PF12111 Polyribonucleotide phosphorylase C terminal V469_11315 PF10150 Ribonuclease E/G family V469_11320 PF01479 S4 domain V469_11320 PF00849 RNA pseudouridylate synthase V469_11330 PF02545 Maf-like protein V469_11335 PF07690 Major Facilitator Superfamily V469_11340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_11340 PF03466 LysR substrate binding domain V469_11350 PF02620 Large ribosomal RNA subunit accumulation protein YceD V469_11355 PF01783 Ribosomal L32p protein family V469_11360 PF02504 Fatty acid synthesis protein V469_11365 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III V469_11365 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal V469_11370 PF00698 Acyl transferase domain V469_11380 PF00550 Phosphopantetheine attachment site V469_11385 PF00109 Beta-ketoacyl synthase, N-terminal domain V469_11385 PF02801 Beta-ketoacyl synthase, C-terminal domain V469_11390 PF01063 Amino-transferase class IV V469_11395 PF02618 YceG-like family V469_11400 PF02223 Thymidylate kinase V469_11405 PF09115 DNA polymerase III, delta subunit, C terminal V469_11410 PF01026 TatD related DNase V469_11415 PF00589 Phage integrase family V469_11425 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF V469_11425 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF V469_11425 PF01189 16S rRNA methyltransferase RsmB/F V469_11430 PF02470 MlaD protein V469_11435 PF04403 Paraquat-inducible protein A V469_11450 PF00285 Citrate synthase, C-terminal domain V469_11455 PF03972 MmgE/PrpD family V469_11470 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain V469_11470 PF06974 Protein of unknown function (DUF1298) V469_11495 PF00106 short chain dehydrogenase V469_11505 PF07130 YebG protein V469_11515 PF05362 Lon protease (S16) C-terminal proteolytic domain V469_11515 PF13654 AAA domain V469_11520 PF07977 FabA-like domain V469_11525 PF04957 Ribosome modulation factor V469_11535 PF00005 ABC transporter V469_11535 PF16326 ABC transporter C-terminal domain V469_11535 PF12848 ABC transporter V469_11545 PF10672 S-adenosylmethionine-dependent methyltransferase V469_11545 PF02926 THUMP domain V469_11545 PF01170 Putative RNA methylase family UPF0020 V469_11550 PF07126 Cell-division protein ZapC V469_11555 PF01180 Dihydroorotate dehydrogenase V469_11560 PF05088 Bacterial NAD-glutamate dehydrogenase V469_11570 PF01433 Peptidase family M1 domain V469_11570 PF11940 Domain of unknown function (DUF3458) Ig-like fold V469_11570 PF17432 Domain of unknown function (DUF3458_C) ARM repeats V469_11575 PF00595 PDZ domain V469_11575 PF11818 C-terminal domain of tail specific protease (DUF3340) V469_11575 PF03572 Peptidase family S41 V469_11575 PF17804 Tail specific protease N-terminal domain V469_11580 PF17516 ProQ C-terminal domain V469_11580 PF04352 ProQ/FINO family V469_11585 PF13185 GAF domain V469_11595 PF00115 Cytochrome C and Quinol oxidase polypeptide I V469_11610 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP V469_11610 PF13442 Cytochrome C oxidase, cbb3-type, subunit III V469_11620 PF00403 Heavy-metal-associated domain V469_11635 PF13545 Crp-like helix-turn-helix domain V469_11635 PF00027 Cyclic nucleotide-binding domain V469_11640 PF00582 Universal stress protein family V469_11645 PF01171 PP-loop family V469_11660 PF14497 Glutathione S-transferase, C-terminal domain V469_11660 PF02798 Glutathione S-transferase, N-terminal domain V469_11665 PF05025 RbsD / FucU transport protein family V469_11670 PF00005 ABC transporter V469_11675 PF02653 Branched-chain amino acid transport system / permease component V469_11680 PF13407 Periplasmic binding protein domain V469_11685 PF00294 pfkB family carbohydrate kinase V469_11690 PF00356 Bacterial regulatory proteins, lacI family V469_11705 PF02146 Sir2 family V469_11720 PF00512 His Kinase A (phospho-acceptor) domain V469_11720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_11720 PF00072 Response regulator receiver domain V469_11720 PF09456 RcsC Alpha-Beta-Loop (ABL) V469_11725 PF00216 Bacterial DNA-binding protein V469_11730 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain V469_11730 PF03147 Ferredoxin-fold anticodon binding domain V469_11730 PF03484 tRNA synthetase B5 domain V469_11730 PF03483 B3/4 domain V469_11730 PF01588 Putative tRNA binding domain V469_11735 PF01409 tRNA synthetases class II core domain (F) V469_11735 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain V469_11740 PF00453 Ribosomal protein L20 V469_11745 PF01632 Ribosomal protein L35 V469_11750 PF05198 Translation initiation factor IF-3, N-terminal domain V469_11750 PF00707 Translation initiation factor IF-3, C-terminal domain V469_11755 PF02824 TGS domain V469_11755 PF03129 Anticodon binding domain V469_11755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) V469_11755 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain V469_11765 PF04055 Radical SAM superfamily V469_11775 PF00521 DNA gyrase/topoisomerase IV, subunit A V469_11775 PF03989 DNA gyrase C-terminal domain, beta-propeller V469_11785 PF13419 Haloacid dehalogenase-like hydrolase V469_11790 PF03477 ATP cone domain V469_11790 PF02867 Ribonucleotide reductase, barrel domain V469_11790 PF00317 Ribonucleotide reductase, all-alpha domain V469_11795 PF00268 Ribonucleotide reductase, small chain V469_11800 PF00111 2Fe-2S iron-sulfur cluster binding domain V469_11805 PF06725 3D domain V469_11805 PF03562 MltA specific insert domain V469_11810 PF06945 Protein of unknown function (DUF1289) V469_11820 PF03613 PTS system mannose/fructose/sorbose family IID component V469_11825 PF03609 PTS system sorbose-specific iic component V469_11830 PF03610 PTS system fructose IIA component V469_11830 PF03830 PTS system sorbose subfamily IIB component V469_11845 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family V469_11845 PF00356 Bacterial regulatory proteins, lacI family V469_11850 PF06560 Glucose-6-phosphate isomerase (GPI) V469_11855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit V469_11855 PF02378 Phosphotransferase system, EIIC V469_11860 PF00294 pfkB family carbohydrate kinase V469_11865 PF00381 PTS HPr component phosphorylation site V469_11865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 V469_11870 PF00356 Bacterial regulatory proteins, lacI family V469_11870 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family V469_11875 PF03222 Tryptophan/tyrosine permease family V469_11890 PF00271 Helicase conserved C-terminal domain V469_11890 PF00270 DEAD/DEAH box helicase V469_11900 PF01264 Chorismate synthase V469_11905 PF05175 Methyltransferase small domain V469_11910 PF01713 Smr domain V469_11920 PF00990 Diguanylate cyclase, GGDEF domain V469_11920 PF08448 PAS fold V469_11925 PF00300 Histidine phosphatase superfamily (branch 1) V469_11940 PF00704 Glycosyl hydrolases family 18 V469_11940 PF08329 Chitinase A, N-terminal domain V469_11955 PF08274 PhnA Zinc-Ribbon V469_11955 PF03831 PhnA domain V469_11975 PF02567 Phenazine biosynthesis-like protein V469_11990 PF01327 Polypeptide deformylase V469_12005 PF05036 Sporulation related domain V469_12005 PF03330 Lytic transglycolase V469_12010 PF16330 MukB hinge domain V469_12010 PF04310 MukB N-terminal V469_12015 PF04288 MukE-like family V469_12020 PF17192 MukF middle domain V469_12020 PF17193 MukF C-terminal domain V469_12020 PF03882 MukF winged-helix domain V469_12030 PF02698 DUF218 domain V469_12035 PF00121 Triosephosphate isomerase V469_12040 PF00365 Phosphofructokinase V469_12045 PF01546 Peptidase family M20/M25/M40 V469_12045 PF07687 Peptidase dimerisation domain V469_12050 PF13419 Haloacid dehalogenase-like hydrolase V469_12055 PF02789 Cytosol aminopeptidase family, N-terminal domain V469_12055 PF00883 Cytosol aminopeptidase family, catalytic domain V469_12080 PF00128 Alpha amylase, catalytic domain V469_12080 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) V469_12090 PF11398 Protein of unknown function (DUF2813) V469_12095 PF12833 Helix-turn-helix domain V469_12095 PF14525 AraC-binding-like domain V469_12105 PF03466 LysR substrate binding domain V469_12105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_12110 PF01925 Sulfite exporter TauE/SafE V469_12125 PF18029 Glyoxalase-like domain V469_12125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V469_12130 PF01820 D-ala D-ala ligase N-terminus V469_12130 PF07478 D-ala D-ala ligase C-terminus V469_12140 PF00255 Glutathione peroxidase V469_12145 PF00270 DEAD/DEAH box helicase V469_12145 PF00271 Helicase conserved C-terminal domain V469_12150 PF13673 Acetyltransferase (GNAT) domain V469_12160 PF02694 Uncharacterised BCR, YnfA/UPF0060 family V469_12170 PF01928 CYTH domain V469_12180 PF00583 Acetyltransferase (GNAT) family V469_12185 PF00465 Iron-containing alcohol dehydrogenase V469_12190 PF03992 Antibiotic biosynthesis monooxygenase V469_12195 PF08543 Phosphomethylpyrimidine kinase V469_12225 PF00561 alpha/beta hydrolase fold V469_12225 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus V469_12230 PF01575 MaoC like domain V469_12250 PF00664 ABC transporter transmembrane region V469_12250 PF00005 ABC transporter V469_12260 PF00005 ABC transporter V469_12260 PF00664 ABC transporter transmembrane region V469_12265 PF01627 Hpt domain V469_12265 PF00512 His Kinase A (phospho-acceptor) domain V469_12265 PF00672 HAMP domain V469_12265 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) V469_12265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_12265 PF00072 Response regulator receiver domain V469_12270 PF00085 Thioredoxin V469_12275 PF00939 Sodium:sulfate symporter transmembrane region V469_12280 PF00343 Carbohydrate phosphorylase V469_12305 PF00425 chorismate binding enzyme V469_12305 PF04715 Anthranilate synthase component I, N terminal region V469_12310 PF00293 NUDIX domain V469_12315 PF03222 Tryptophan/tyrosine permease family V469_12320 PF00375 Sodium:dicarboxylate symporter family V469_12325 PF00270 DEAD/DEAH box helicase V469_12325 PF09382 RQC domain V469_12325 PF00271 Helicase conserved C-terminal domain V469_12325 PF16124 RecQ zinc-binding V469_12325 PF00570 HRDC domain V469_12330 PF06798 PrkA serine protein kinase C-terminal domain V469_12330 PF08298 PrkA AAA domain V469_12335 PF04285 Protein of unknown function (DUF444) V469_12340 PF04293 SpoVR like protein V469_12345 PF00392 Bacterial regulatory proteins, gntR family V469_12345 PF07840 FadR C-terminal domain V469_12350 PF06450 Bacterial Na+/H+ antiporter B (NhaB) V469_12355 PF02600 Disulfide bond formation protein DsbB V469_12360 PF09335 SNARE associated Golgi protein V469_12370 PF04851 Type III restriction enzyme, res subunit V469_12370 PF12344 Ultra-violet resistance protein B V469_12370 PF17757 UvrB interaction domain V469_12370 PF00271 Helicase conserved C-terminal domain V469_12370 PF02151 UvrB/uvrC motif V469_12385 PF02080 TrkA-C domain V469_12385 PF06826 Predicted Permease Membrane Region V469_12390 PF01464 Transglycosylase SLT domain V469_12390 PF00497 Bacterial extracellular solute-binding proteins, family 3 V469_12405 PF01970 Tripartite tricarboxylate transporter TctA family V469_12410 PF12431 Transcriptional regulator V469_12410 PF08279 HTH domain V469_12410 PF00072 Response regulator receiver domain V469_12415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_12415 PF17203 Single cache domain 3 V469_12415 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain V469_12415 PF00989 PAS fold V469_12420 PF01047 MarR family V469_12420 PF00480 ROK family V469_12425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_12425 PF17200 Single Cache domain 2 V469_12425 PF00672 HAMP domain V469_12430 PF02810 SEC-C motif V469_12435 PF01266 FAD dependent oxidoreductase V469_12435 PF04324 BFD-like [2Fe-2S] binding domain V469_12440 PF00890 FAD binding domain V469_12445 PF13183 4Fe-4S dicluster domain V469_12445 PF02754 Cysteine-rich domain V469_12460 PF02335 Cytochrome c552 V469_12465 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) V469_12465 PF13435 Cytochrome c554 and c-prime V469_12470 PF00037 4Fe-4S binding domain V469_12470 PF13247 4Fe-4S dicluster domain V469_12475 PF03916 Polysulphide reductase, NrfD V469_12480 PF01578 Cytochrome C assembly protein V469_12480 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal V469_12485 PF08534 Redoxin V469_12495 PF00293 NUDIX domain V469_12500 PF00768 D-alanyl-D-alanine carboxypeptidase V469_12505 PF01212 Beta-eliminating lyase V469_12510 PF04244 Deoxyribodipyrimidine photo-lyase-related protein V469_12515 PF01266 FAD dependent oxidoreductase V469_12525 PF07969 Amidohydrolase family V469_12530 PF00478 IMP dehydrogenase / GMP reductase domain V469_12530 PF00571 CBS domain V469_12540 PF01717 Cobalamin-independent synthase, Catalytic domain V469_12540 PF08267 Cobalamin-independent synthase, N-terminal domain V469_12545 PF03466 LysR substrate binding domain V469_12545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_12555 PF07715 TonB-dependent Receptor Plug Domain V469_12555 PF00593 TonB dependent receptor V469_12560 PF12833 Helix-turn-helix domain V469_12565 PF00106 short chain dehydrogenase V469_12570 PF03466 LysR substrate binding domain V469_12570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_12575 PF13460 NAD(P)H-binding V469_12585 PF01053 Cys/Met metabolism PLP-dependent enzyme V469_12590 PF05193 Peptidase M16 inactive domain V469_12590 PF00675 Insulinase (Peptidase family M16) V469_12595 PF02774 Semialdehyde dehydrogenase, dimerisation domain V469_12595 PF01118 Semialdehyde dehydrogenase, NAD binding domain V469_12600 PF00893 Small Multidrug Resistance protein V469_12605 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding V469_12605 PF18381 YcaO cyclodehydratase C-terminal domain V469_12610 PF01226 Formate/nitrite transporter V469_12615 PF01228 Glycine radical V469_12615 PF02901 Pyruvate formate lyase-like V469_12625 PF00202 Aminotransferase class-III V469_12630 PF00266 Aminotransferase class-V V469_12635 PF00392 Bacterial regulatory proteins, gntR family V469_12635 PF07702 UTRA domain V469_12645 PF00005 ABC transporter V469_12650 PF00528 Binding-protein-dependent transport system inner membrane component V469_12655 PF01266 FAD dependent oxidoreductase V469_12660 PF03692 Putative zinc- or iron-chelating domain V469_12670 PF00549 CoA-ligase V469_12670 PF02629 CoA binding domain V469_12675 PF08442 ATP-grasp domain V469_12675 PF00549 CoA-ligase V469_12680 PF02817 e3 binding domain V469_12680 PF00364 Biotin-requiring enzyme V469_12680 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) V469_12685 PF16078 2-oxoglutarate dehydrogenase N-terminus V469_12685 PF16870 2-oxoglutarate dehydrogenase C-terminal V469_12685 PF02779 Transketolase, pyrimidine binding domain V469_12685 PF00676 Dehydrogenase E1 component V469_12690 PF13085 2Fe-2S iron-sulfur cluster binding domain V469_12695 PF02910 Fumarate reductase flavoprotein C-term V469_12695 PF00890 FAD binding domain V469_12700 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit V469_12705 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit V469_12710 PF00285 Citrate synthase, C-terminal domain V469_12725 PF02801 Beta-ketoacyl synthase, C-terminal domain V469_12725 PF00109 Beta-ketoacyl synthase, N-terminal domain V469_12730 PF05430 S-adenosyl-L-methionine-dependent methyltransferase V469_12730 PF01266 FAD dependent oxidoreductase V469_12740 PF03606 C4-dicarboxylate anaerobic carrier V469_12755 PF01863 Protein of unknown function DUF45 V469_12770 PF01197 Ribosomal protein L31 V469_12775 PF00444 Ribosomal protein L36 V469_12780 PF02678 Pirin V469_12780 PF05726 Pirin C-terminal cupin domain V469_12785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_12785 PF03466 LysR substrate binding domain V469_12790 PF02311 AraC-like ligand binding domain V469_12790 PF12833 Helix-turn-helix domain V469_12795 PF02653 Branched-chain amino acid transport system / permease component V469_12800 PF00005 ABC transporter V469_12805 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family V469_12810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain V469_12815 PF00596 Class II Aldolase and Adducin N-terminal domain V469_12820 PF11762 L-arabinose isomerase C-terminal domain V469_12820 PF02610 L-arabinose isomerase V469_12825 PF08411 Exonuclease C-terminal V469_12825 PF00929 Exonuclease V469_12840 PF03788 LrgA family V469_12845 PF04172 LrgB-like family V469_12850 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region V469_12850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region V469_12855 PF00501 AMP-binding enzyme V469_12860 PF08891 YfcL protein V469_12870 PF03741 Integral membrane protein TerC family V469_12875 PF00691 OmpA family V469_12880 PF00990 Diguanylate cyclase, GGDEF domain V469_12880 PF17152 Periplasmic sensor domain V469_12885 PF13689 YfiR/HmsC-like V469_12890 PF18024 Helix-turn-helix domain V469_12890 PF00158 Sigma-54 interaction domain V469_12895 PF01329 Pterin 4 alpha carbinolamine dehydratase V469_12900 PF01329 Pterin 4 alpha carbinolamine dehydratase V469_12905 PF00351 Biopterin-dependent aromatic amino acid hydroxylase V469_12910 PF05128 Domain of unknown function (DUF697) V469_12915 PF04317 YcjX-like family, DUF463 V469_12925 PF06667 Phage shock protein B V469_12930 PF04012 PspA/IM30 family V469_12935 PF02954 Bacterial regulatory protein, Fis family V469_12935 PF00158 Sigma-54 interaction domain V469_12940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V469_12945 PF00528 Binding-protein-dependent transport system inner membrane component V469_12950 PF00528 Binding-protein-dependent transport system inner membrane component V469_12950 PF12911 N-terminal TM domain of oligopeptide transport permease C V469_12960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V469_12960 PF00005 ABC transporter V469_12965 PF00005 ABC transporter V469_12970 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) V469_12975 PF00156 Phosphoribosyl transferase domain V469_12980 PF02674 Colicin V production protein V469_12985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) V469_12985 PF02403 Seryl-tRNA synthetase N-terminal domain V469_12995 PF12002 MgsA AAA+ ATPase C terminal V469_12995 PF16193 AAA C-terminal domain V469_12995 PF00004 ATPase family associated with various cellular activities (AAA) V469_13000 PF03548 Outer membrane lipoprotein carrier protein LolA V469_13005 PF13491 4TM region of DNA translocase FtsK/SpoIIIE V469_13005 PF17854 FtsK alpha domain V469_13005 PF09397 Ftsk gamma domain V469_13005 PF01580 FtsK/SpoIIIE family V469_13010 PF01037 Lrp/AsnC ligand binding domain V469_13015 PF07992 Pyridine nucleotide-disulphide oxidoreductase V469_13020 PF00990 Diguanylate cyclase, GGDEF domain V469_13020 PF17158 Membrane-associated sensor, integral membrane domain V469_13025 PF05433 Glycine zipper 2TM domain V469_13030 PF03588 Leucyl/phenylalanyl-tRNA protein transferase V469_13035 PF04376 Arginine-tRNA-protein transferase, N terminus V469_13035 PF04377 Arginine-tRNA-protein transferase, C terminus V469_13040 PF01176 Translation initiation factor 1A / IF-1 V469_13045 PF07724 AAA domain (Cdc48 subfamily) V469_13045 PF17871 AAA lid domain V469_13045 PF02861 Clp amino terminal domain, pathogenicity island component V469_13045 PF10431 C-terminal, D2-small domain, of ClpB protein V469_13045 PF00004 ATPase family associated with various cellular activities (AAA) V469_13050 PF02617 ATP-dependent Clp protease adaptor protein ClpS V469_13055 PF00313 'Cold-shock' DNA-binding domain V469_13060 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain V469_13060 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain V469_13085 PF00182 Chitinase class I V469_13090 PF04717 Type VI secretion system, phage-baseplate injector V469_13120 PF02830 V4R domain V469_13120 PF02954 Bacterial regulatory protein, Fis family V469_13120 PF00158 Sigma-54 interaction domain V469_13120 PF06505 Activator of aromatic catabolism V469_13125 PF10431 C-terminal, D2-small domain, of ClpB protein V469_13125 PF17871 AAA lid domain V469_13125 PF07724 AAA domain (Cdc48 subfamily) V469_13125 PF00004 ATPase family associated with various cellular activities (AAA) V469_13195 PF04717 Type VI secretion system, phage-baseplate injector V469_13200 PF05638 Type VI secretion system effector, Hcp V469_13215 PF10722 Putative bacterial sensory transduction regulator V469_13225 PF00265 Thymidine kinase V469_13230 PF03553 Na+/H+ antiporter family V469_13235 PF00816 H-NS histone family V469_13240 PF01923 Cobalamin adenosyltransferase V469_13245 PF12843 Putative quorum-sensing-regulated virulence factor V469_13250 PF04055 Radical SAM superfamily V469_13255 PF06508 Queuosine biosynthesis protein QueC V469_13270 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family V469_13275 PF18073 Rubredoxin metal binding domain V469_13285 PF00216 Bacterial DNA-binding protein V469_13290 PF00575 S1 RNA binding domain V469_13295 PF02224 Cytidylate kinase V469_13300 PF00925 GTP cyclohydrolase II V469_13305 PF03466 LysR substrate binding domain V469_13305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_13310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_13310 PF03466 LysR substrate binding domain V469_13315 PF07690 Major Facilitator Superfamily V469_13330 PF00881 Nitroreductase family V469_13335 PF13188 PAS domain V469_13335 PF03707 Bacterial signalling protein N terminal repeat V469_13335 PF00990 Diguanylate cyclase, GGDEF domain V469_13335 PF00563 EAL domain V469_13345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_13345 PF03466 LysR substrate binding domain V469_13350 PF00072 Response regulator receiver domain V469_13360 PF01212 Beta-eliminating lyase V469_13375 PF00248 Aldo/keto reductase family V469_13380 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) V469_13390 PF03411 Penicillin-insensitive murein endopeptidase V469_13400 PF04536 TPM domain V469_13415 PF01618 MotA/TolQ/ExbB proton channel family V469_13420 PF13677 Membrane MotB of proton-channel complex MotA/MotB V469_13420 PF00691 OmpA family V469_13425 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 V469_13430 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit V469_13435 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit V469_13435 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit V469_13445 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit V469_13445 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region V469_13450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain V469_13450 PF00384 Molybdopterin oxidoreductase V469_13450 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region V469_13455 PF00146 NADH dehydrogenase V469_13460 PF12838 4Fe-4S dicluster domain V469_13465 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 V469_13470 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L V469_13475 PF00361 Proton-conducting membrane transporter V469_13475 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus V469_13480 PF00361 Proton-conducting membrane transporter V469_13485 PF00361 Proton-conducting membrane transporter V469_13495 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal V469_13495 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain V469_13495 PF02769 AIR synthase related protein, C-terminal domain V469_13500 PF01464 Transglycosylase SLT domain V469_13500 PF00497 Bacterial extracellular solute-binding proteins, family 3 V469_13505 PF07191 zinc-ribbons V469_13510 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal V469_13510 PF01926 50S ribosome-binding GTPase V469_13515 PF13360 PQQ-like domain V469_13520 PF09976 Tetratricopeptide repeat-like domain V469_13525 PF13393 Histidyl-tRNA synthetase V469_13525 PF03129 Anticodon binding domain V469_13530 PF04551 GcpE protein V469_13535 PF13464 Domain of unknown function (DUF4115) V469_13545 PF04055 Radical SAM superfamily V469_13550 PF00334 Nucleoside diphosphate kinase V469_13555 PF00883 Cytosol aminopeptidase family, catalytic domain V469_13555 PF12404 Peptidase V469_13560 PF12404 Peptidase V469_13560 PF00883 Cytosol aminopeptidase family, catalytic domain V469_13565 PF00111 2Fe-2S iron-sulfur cluster binding domain V469_13570 PF00012 Hsp70 protein V469_13575 PF07743 HSCB C-terminal oligomerisation domain V469_13580 PF01521 Iron-sulphur cluster biosynthesis V469_13585 PF01592 NifU-like N terminal domain V469_13590 PF00266 Aminotransferase class-V V469_13595 PF02082 Transcriptional regulator V469_13600 PF00588 SpoU rRNA Methylase family V469_13625 PF13181 Tetratricopeptide repeat V469_13625 PF07719 Tetratricopeptide repeat V469_13635 PF02355 Protein export membrane protein V469_13635 PF07549 SecD/SecF GG Motif V469_13640 PF02355 Protein export membrane protein V469_13640 PF07549 SecD/SecF GG Motif V469_13640 PF13721 SecD export protein N-terminal TM region V469_13645 PF02699 Preprotein translocase subunit V469_13650 PF01702 Queuine tRNA-ribosyltransferase V469_13655 PF02547 Queuosine biosynthesis protein V469_13660 PF00571 CBS domain V469_13665 PF00578 AhpC/TSA family V469_13665 PF10417 C-terminal domain of 1-Cys peroxiredoxin V469_13670 PF07992 Pyridine nucleotide-disulphide oxidoreductase V469_13670 PF13192 Thioredoxin domain V469_13675 PF07690 Major Facilitator Superfamily V469_13685 PF08241 Methyltransferase domain V469_13690 PF03960 ArsC family V469_13695 PF01758 Sodium Bile acid symporter family V469_13700 PF01022 Bacterial regulatory protein, arsR family V469_13705 PF02347 Glycine cleavage system P-protein V469_13710 PF01597 Glycine cleavage H-protein V469_13715 PF01571 Aminomethyltransferase folate-binding domain V469_13715 PF08669 Glycine cleavage T-protein C-terminal barrel domain V469_13720 PF01494 FAD binding domain V469_13725 PF01494 FAD binding domain V469_13730 PF03695 Uncharacterised protein family (UPF0149) V469_13740 PF07690 Major Facilitator Superfamily V469_13745 PF02798 Glutathione S-transferase, N-terminal domain V469_13745 PF00043 Glutathione S-transferase, C-terminal domain V469_13755 PF00459 Inositol monophosphatase family V469_13760 PF00672 HAMP domain V469_13760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_13765 PF02535 ZIP Zinc transporter V469_13775 PF01048 Phosphorylase superfamily V469_13785 PF01497 Periplasmic binding protein V469_13790 PF02719 Polysaccharide biosynthesis protein V469_13795 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family V469_13810 PF00202 Aminotransferase class-III V469_13850 PF02561 Flagellar protein FliS V469_13855 PF07195 Flagellar hook-associated protein 2 C-terminus V469_13855 PF02465 Flagellar hook-associated protein 2 N-terminus V469_13855 PF07196 Flagellin hook IN motif V469_13865 PF00700 Bacterial flagellin C-terminal helical region V469_13865 PF07196 Flagellin hook IN motif V469_13865 PF00669 Bacterial flagellin N-terminal helical region V469_13870 PF01527 Transposase V469_13880 PF00700 Bacterial flagellin C-terminal helical region V469_13880 PF07196 Flagellin hook IN motif V469_13880 PF00669 Bacterial flagellin N-terminal helical region V469_13885 PF00700 Bacterial flagellin C-terminal helical region V469_13885 PF00669 Bacterial flagellin N-terminal helical region V469_13885 PF07196 Flagellin hook IN motif V469_13890 PF03458 UPF0126 domain V469_13900 PF02926 THUMP domain V469_13900 PF02568 Thiamine biosynthesis protein (ThiI) V469_13910 PF00905 Penicillin binding protein transpeptidase domain V469_13910 PF06832 Penicillin-Binding Protein C-terminus Family V469_13910 PF00912 Transglycosylase V469_13915 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain V469_13915 PF07678 A-macroglobulin TED domain V469_13915 PF01835 MG2 domain V469_13915 PF17962 Bacterial macroglobulin domain 6 V469_13915 PF11974 Bacterial alpha-2-macroglobulin MG3 domain V469_13915 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain V469_13915 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain V469_13915 PF00207 Alpha-2-macroglobulin family V469_13915 PF07703 Alpha-2-macroglobulin bait region domain V469_13920 PF07687 Peptidase dimerisation domain V469_13920 PF01546 Peptidase family M20/M25/M40 V469_13925 PF01594 AI-2E family transporter V469_13930 PF02321 Outer membrane efflux protein V469_13935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V469_13935 PF00529 HlyD membrane-fusion protein of T1SS V469_13950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain V469_13950 PF07992 Pyridine nucleotide-disulphide oxidoreductase V469_13955 PF00563 EAL domain V469_13955 PF00990 Diguanylate cyclase, GGDEF domain V469_13955 PF03707 Bacterial signalling protein N terminal repeat V469_13960 PF04055 Radical SAM superfamily V469_13970 PF00528 Binding-protein-dependent transport system inner membrane component V469_13975 PF00528 Binding-protein-dependent transport system inner membrane component V469_13980 PF00497 Bacterial extracellular solute-binding proteins, family 3 V469_13985 PF00005 ABC transporter V469_13990 PF03956 Lysine exporter LysO V469_13995 PF01979 Amidohydrolase family V469_14000 PF04336 Acyl carrier protein phosphodiesterase V469_14020 PF03960 ArsC family V469_14025 PF00578 AhpC/TSA family V469_14030 PF01435 Peptidase family M48 V469_14030 PF13181 Tetratricopeptide repeat V469_14040 PF01594 AI-2E family transporter V469_14050 PF00561 alpha/beta hydrolase fold V469_14055 PF03976 Polyphosphate kinase 2 (PPK2) V469_14060 PF00005 ABC transporter V469_14060 PF08402 TOBE domain V469_14065 PF00528 Binding-protein-dependent transport system inner membrane component V469_14070 PF00528 Binding-protein-dependent transport system inner membrane component V469_14070 PF14785 Maltose transport system permease protein MalF P2 domain V469_14075 PF01547 Bacterial extracellular solute-binding protein V469_14080 PF04245 37-kD nucleoid-associated bacterial protein V469_14085 PF07208 Protein of unknown function (DUF1414) V469_14090 PF11893 Domain of unknown function (DUF3413) V469_14090 PF00884 Sulfatase V469_14095 PF00593 TonB dependent receptor V469_14095 PF07715 TonB-dependent Receptor Plug Domain V469_14100 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain V469_14100 PF00326 Prolyl oligopeptidase family V469_14120 PF03974 Ecotin V469_14125 PF04219 Protein of unknown function, DUF V469_14130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_14130 PF03466 LysR substrate binding domain V469_14135 PF02153 Prephenate dehydrogenase V469_14135 PF01817 Chorismate mutase type II V469_14140 PF00793 DAHP synthetase I family V469_14145 PF03009 Glycerophosphoryl diester phosphodiesterase family V469_14150 PF16901 C-terminal domain of alpha-glycerophosphate oxidase V469_14150 PF01266 FAD dependent oxidoreductase V469_14155 PF08220 DeoR-like helix-turn-helix domain V469_14155 PF00455 DeoR C terminal sensor domain V469_14160 PF07690 Major Facilitator Superfamily V469_14165 PF00230 Major intrinsic protein V469_14170 PF00370 FGGY family of carbohydrate kinases, N-terminal domain V469_14170 PF02782 FGGY family of carbohydrate kinases, C-terminal domain V469_14175 PF03466 LysR substrate binding domain V469_14175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_14195 PF00248 Aldo/keto reductase family V469_14200 PF07690 Major Facilitator Superfamily V469_14210 PF02322 Cytochrome bd terminal oxidase subunit II V469_14215 PF01654 Cytochrome bd terminal oxidase subunit I V469_14220 PF00392 Bacterial regulatory proteins, gntR family V469_14220 PF00155 Aminotransferase class I and II V469_14230 PF04391 Protein of unknown function (DUF533) V469_14255 PF07690 Major Facilitator Superfamily V469_14260 PF03466 LysR substrate binding domain V469_14260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_14270 PF07690 Major Facilitator Superfamily V469_14275 PF01479 S4 domain V469_14275 PF00849 RNA pseudouridylate synthase V469_14285 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase V469_14285 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain V469_14305 PF04851 Type III restriction enzyme, res subunit V469_14305 PF00271 Helicase conserved C-terminal domain V469_14310 PF00300 Histidine phosphatase superfamily (branch 1) V469_14315 PF13309 HTH domain V469_14315 PF08348 YheO-like PAS domain V469_14320 PF03313 Serine dehydratase alpha chain V469_14325 PF01042 Endoribonuclease L-PSP V469_14335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_14335 PF00672 HAMP domain V469_14350 PF17810 Arginine decarboxylase helical bundle domain V469_14350 PF17944 Arginine decarboxylase C-terminal helical extension V469_14350 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain V469_14355 PF01546 Peptidase family M20/M25/M40 V469_14355 PF07687 Peptidase dimerisation domain V469_14380 PF04264 YceI-like domain V469_14385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_14385 PF03466 LysR substrate binding domain V469_14395 PF01268 Formate--tetrahydrofolate ligase V469_14400 PF17200 Single Cache domain 2 V469_14400 PF00672 HAMP domain V469_14400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_14405 PF01227 GTP cyclohydrolase I V469_14410 PF03454 MoeA C-terminal region (domain IV) V469_14410 PF03453 MoeA N-terminal region (domain I and II) V469_14410 PF00994 Probable molybdopterin binding domain V469_14415 PF00899 ThiF family V469_14420 PF00561 alpha/beta hydrolase fold V469_14425 PF00005 ABC transporter V469_14425 PF03459 TOBE domain V469_14430 PF00528 Binding-protein-dependent transport system inner membrane component V469_14440 PF02391 MoaE protein V469_14445 PF02597 ThiS family V469_14450 PF01967 MoaC family V469_14455 PF00994 Probable molybdopterin binding domain V469_14460 PF03264 NapC/NirT cytochrome c family, N-terminal region V469_14465 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) V469_14470 PF12801 4Fe-4S binding domain V469_14470 PF13237 4Fe-4S dicluster domain V469_14475 PF12800 4Fe-4S binding domain V469_14475 PF12838 4Fe-4S dicluster domain V469_14480 PF04879 Molybdopterin oxidoreductase Fe4S4 domain V469_14480 PF01568 Molydopterin dinucleotide binding domain V469_14480 PF00384 Molybdopterin oxidoreductase V469_14480 PF10518 TAT (twin-arginine translocation) pathway signal sequence V469_14495 PF00037 4Fe-4S binding domain V469_14495 PF12800 4Fe-4S binding domain V469_14495 PF13187 4Fe-4S dicluster domain V469_14500 PF06463 Molybdenum Cofactor Synthesis C V469_14500 PF04055 Radical SAM superfamily V469_14505 PF00672 HAMP domain V469_14505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_14505 PF07730 Histidine kinase V469_14505 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term V469_14510 PF00196 Bacterial regulatory proteins, luxR family V469_14510 PF00072 Response regulator receiver domain V469_14520 PF00072 Response regulator receiver domain V469_14520 PF01627 Hpt domain V469_14520 PF00512 His Kinase A (phospho-acceptor) domain V469_14520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_14520 PF00672 HAMP domain V469_14520 PF17149 Periplasmic sensor domain found in signal transduction proteins V469_14530 PF01933 Uncharacterised protein family UPF0052 V469_14540 PF13230 Glutamine amidotransferases class-II V469_14545 PF13580 SIS domain V469_14555 PF09317 Domain of unknown function (DUF1974) V469_14555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain V469_14555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain V469_14555 PF02770 Acyl-CoA dehydrogenase, middle domain V469_14565 PF11849 Domain of unknown function (DUF3369) V469_14575 PF00929 Exonuclease V469_14580 PF00075 RNase H V469_14585 PF08241 Methyltransferase domain V469_14590 PF16123 Hydroxyacylglutathione hydrolase C-terminus V469_14590 PF00753 Metallo-beta-lactamase superfamily V469_14595 PF01476 LysM domain V469_14595 PF01464 Transglycosylase SLT domain V469_14600 PF03372 Endonuclease/Exonuclease/phosphatase family V469_14610 PF03061 Thioesterase superfamily V469_14620 PF00356 Bacterial regulatory proteins, lacI family V469_14625 PF14718 Soluble lytic murein transglycosylase L domain V469_14625 PF01464 Transglycosylase SLT domain V469_14630 PF00563 EAL domain V469_14630 PF03707 Bacterial signalling protein N terminal repeat V469_14630 PF00990 Diguanylate cyclase, GGDEF domain V469_14635 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein V469_14655 PF04357 TamB, inner membrane protein subunit of TAM complex V469_14660 PF07244 Surface antigen variable number repeat V469_14660 PF17243 POTRA domain TamA domain 1 V469_14660 PF01103 Surface antigen V469_14675 PF01625 Peptide methionine sulfoxide reductase V469_14685 PF02627 Carboxymuconolactone decarboxylase family V469_14690 PF00403 Heavy-metal-associated domain V469_14690 PF07992 Pyridine nucleotide-disulphide oxidoreductase V469_14690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain V469_14695 PF13416 Bacterial extracellular solute-binding protein V469_14705 PF00005 ABC transporter V469_14710 PF01066 CDP-alcohol phosphatidyltransferase V469_14715 PF13406 Transglycosylase SLT domain V469_14720 PF01047 MarR family V469_14730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain V469_14730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III V469_14730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II V469_14730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I V469_14735 PF17206 SeqA protein N-terminal domain V469_14735 PF03925 SeqA protein C-terminal domain V469_14740 PF12697 Alpha/beta hydrolase family V469_14750 PF01402 Ribbon-helix-helix protein, copG family V469_14755 PF00258 Flavodoxin V469_14765 PF01475 Ferric uptake regulator family V469_14770 PF00749 tRNA synthetases class I (E and Q), catalytic domain V469_14770 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain V469_14775 PF02838 Glycosyl hydrolase family 20, domain 2 V469_14775 PF03173 Putative carbohydrate binding domain V469_14775 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain V469_14775 PF00728 Glycosyl hydrolase family 20, catalytic domain V469_14780 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 V469_14780 PF00367 phosphotransferase system, EIIB V469_14780 PF02378 Phosphotransferase system, EIIC V469_14785 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase V469_14790 PF01979 Amidohydrolase family V469_14795 PF00480 ROK family V469_14795 PF01047 MarR family V469_14805 PF00884 Sulfatase V469_14805 PF08019 Phosphoethanolamine transferase EptA/EptB V469_14810 PF01709 Transcriptional regulator V469_14815 PF02938 GAD domain V469_14815 PF01336 OB-fold nucleic acid binding domain V469_14815 PF00152 tRNA synthetases class II (D, K and N) V469_14820 PF01904 Protein of unknown function DUF72 V469_14825 PF13649 Methyltransferase domain V469_14830 PF08003 Protein of unknown function (DUF1698) V469_14850 PF00578 AhpC/TSA family V469_14850 PF10417 C-terminal domain of 1-Cys peroxiredoxin V469_14855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_14855 PF03466 LysR substrate binding domain V469_14860 PF07968 Leukocidin/Hemolysin toxin family V469_14860 PF12563 Hemolytic toxin N terminal V469_14865 PF00877 NlpC/P60 family V469_14875 PF00171 Aldehyde dehydrogenase family V469_14880 PF00440 Bacterial regulatory proteins, tetR family V469_14880 PF08359 YsiA-like protein, C-terminal region V469_14890 PF00465 Iron-containing alcohol dehydrogenase V469_14900 PF00291 Pyridoxal-phosphate dependent enzyme V469_14920 PF01554 MatE V469_14940 PF01804 Penicillin amidase V469_14945 PF10371 Domain of unknown function V469_14945 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II V469_14945 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase V469_14945 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg V469_14945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain V469_14950 PF07992 Pyridine nucleotide-disulphide oxidoreductase V469_14950 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region V469_14950 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster V469_14955 PF03473 MOSC domain V469_14955 PF03476 MOSC N-terminal beta barrel domain V469_14955 PF00111 2Fe-2S iron-sulfur cluster binding domain V469_14955 PF00111 2Fe-2S iron-sulfur cluster binding domain V469_14955 PF03473 MOSC domain V469_14955 PF03476 MOSC N-terminal beta barrel domain V469_14960 PF08447 PAS fold V469_14960 PF13426 PAS domain V469_14960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_14965 PF01435 Peptidase family M48 V469_14975 PF12697 Alpha/beta hydrolase family V469_14975 PF08241 Methyltransferase domain V469_14980 PF00155 Aminotransferase class I and II V469_14985 PF04055 Radical SAM superfamily V469_14985 PF06968 Biotin and Thiamin Synthesis associated domain V469_15005 PF00152 tRNA synthetases class II (D, K and N) V469_15005 PF01336 OB-fold nucleic acid binding domain V469_15010 PF03605 Anaerobic c4-dicarboxylate membrane transporter V469_15020 PF01546 Peptidase family M20/M25/M40 V469_15020 PF07687 Peptidase dimerisation domain V469_15025 PF03606 C4-dicarboxylate anaerobic carrier V469_15035 PF03466 LysR substrate binding domain V469_15035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_15040 PF03960 ArsC family V469_15045 PF07687 Peptidase dimerisation domain V469_15045 PF01546 Peptidase family M20/M25/M40 V469_15050 PF02557 D-alanyl-D-alanine carboxypeptidase V469_15070 PF02080 TrkA-C domain V469_15070 PF00999 Sodium/hydrogen exchanger family V469_15070 PF03471 Transporter associated domain V469_15080 PF01810 LysE type translocator V469_15085 PF00672 HAMP domain V469_15085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_15090 PF07509 Protein of unknown function (DUF1523) V469_15105 PF01156 Inosine-uridine preferring nucleoside hydrolase V469_15110 PF00849 RNA pseudouridylate synthase V469_15115 PF01048 Phosphorylase superfamily V469_15120 PF00465 Iron-containing alcohol dehydrogenase V469_15155 PF00437 Type II/IV secretion system protein V469_15170 PF13629 Pilus formation protein N terminal region V469_15170 PF00263 Bacterial type II and III secretion system protein V469_15170 PF04972 BON domain V469_15200 PF04355 SmpA / OmlA family V469_15205 PF13460 NAD(P)H-binding V469_15215 PF03364 Polyketide cyclase / dehydrase and lipid transport V469_15220 PF01668 SmpB protein V469_15225 PF08463 EcoEI R protein C-terminal V469_15225 PF04851 Type III restriction enzyme, res subunit V469_15225 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) V469_15225 PF00271 Helicase conserved C-terminal domain V469_15300 PF10124 Mu-like prophage major head subunit gpT V469_15305 PF10123 Mu-like prophage I protein V469_15325 PF06074 Protein of unknown function (DUF935) V469_15330 PF03237 Terminase-like family V469_15335 PF11985 Protein of unknown function (DUF3486) V469_15340 PF08461 Ribonuclease R winged-helix domain V469_15380 PF08765 Mor transcription activator family V469_15450 PF00271 Helicase conserved C-terminal domain V469_15450 PF04851 Type III restriction enzyme, res subunit V469_15450 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) V469_15450 PF08463 EcoEI R protein C-terminal V469_15455 PF12161 HsdM N-terminal domain V469_15455 PF02384 N-6 DNA Methylase V469_15460 PF01420 Type I restriction modification DNA specificity domain V469_15485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_15485 PF03466 LysR substrate binding domain V469_15490 PF02447 GntP family permease V469_15495 PF00291 Pyridoxal-phosphate dependent enzyme V469_15505 PF00180 Isocitrate/isopropylmalate dehydrogenase V469_15510 PF12833 Helix-turn-helix domain V469_15515 PF01238 Phosphomannose isomerase type I V469_15540 PF00155 Aminotransferase class I and II V469_15545 PF00367 phosphotransferase system, EIIB V469_15545 PF02378 Phosphotransferase system, EIIC V469_15550 PF00356 Bacterial regulatory proteins, lacI family V469_15550 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family V469_15565 PF00583 Acetyltransferase (GNAT) family V469_15585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 V469_15585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit V469_15585 PF02378 Phosphotransferase system, EIIC V469_15590 PF07690 Major Facilitator Superfamily V469_15595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit V469_15605 PF00849 RNA pseudouridylate synthase V469_15610 PF00293 NUDIX domain V469_15620 PF04356 Protein of unknown function (DUF489) V469_15625 PF08328 Adenylosuccinate lyase C-terminal V469_15625 PF00206 Lyase V469_15630 PF08007 Cupin superfamily protein V469_15640 PF13508 Acetyltransferase (GNAT) domain V469_15650 PF02798 Glutathione S-transferase, N-terminal domain V469_15655 PF01243 Pyridoxamine 5'-phosphate oxidase V469_15655 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region V469_15670 PF01189 16S rRNA methyltransferase RsmB/F V469_15670 PF01029 NusB family V469_15675 PF00462 Glutaredoxin V469_15680 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain V469_15680 PF02777 Iron/manganese superoxide dismutases, C-terminal domain V469_15685 PF04333 MlaA lipoprotein V469_15690 PF03918 Cytochrome C biogenesis protein V469_15695 PF03918 Cytochrome C biogenesis protein V469_15700 PF08534 Redoxin V469_15705 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal V469_15705 PF01578 Cytochrome C assembly protein V469_15710 PF03100 CcmE V469_15715 PF04995 Heme exporter protein D (CcmD) V469_15720 PF01578 Cytochrome C assembly protein V469_15725 PF03379 CcmB protein V469_15730 PF00005 ABC transporter V469_15740 PF01584 CheW-like domain V469_15750 PF13614 AAA domain V469_15755 PF13677 Membrane MotB of proton-channel complex MotA/MotB V469_15755 PF00691 OmpA family V469_15760 PF01618 MotA/TolQ/ExbB proton channel family V469_15765 PF01339 CheB methylesterase V469_15765 PF00072 Response regulator receiver domain V469_15770 PF02895 Signal transducing histidine kinase, homodimeric domain V469_15770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_15770 PF01584 CheW-like domain V469_15770 PF07194 P2 response regulator binding domain V469_15770 PF01627 Hpt domain V469_15775 PF04344 Chemotaxis phosphatase, CheZ V469_15780 PF00072 Response regulator receiver domain V469_15785 PF04539 Sigma-70 region 3 V469_15785 PF04542 Sigma-70 region 2 V469_15785 PF04545 Sigma-70, region 4 V469_15790 PF10609 NUBPL iron-transfer P-loop NTPase V469_15795 PF00448 SRP54-type protein, GTPase domain V469_15800 PF00771 FHIPEP family V469_15805 PF01312 FlhB HrpN YscU SpaS Family V469_15810 PF01311 Bacterial export proteins, family 1 V469_15815 PF01313 Bacterial export proteins, family 3 V469_15820 PF00813 FliP family V469_15825 PF04347 Flagellar biosynthesis protein, FliO V469_15830 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term V469_15835 PF02154 Flagellar motor switch protein FliM V469_15835 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term V469_15855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain V469_15855 PF18269 T3SS EscN ATPase C-terminal domain V469_15865 PF14841 FliG middle domain V469_15865 PF01706 FliG C-terminal domain V469_15865 PF14842 FliG N-terminal domain V469_15870 PF08345 Flagellar M-ring protein C-terminal V469_15870 PF01514 Secretory protein of YscJ/FliF family V469_15875 PF02049 Flagellar hook-basal body complex protein FliE V469_15885 PF00072 Response regulator receiver domain V469_15890 PF00919 Uncharacterized protein family UPF0004 V469_15890 PF18693 TRAM domain V469_15890 PF04055 Radical SAM superfamily V469_15900 PF16671 Actin cross-linking domain V469_15900 PF07634 RtxA repeat V469_15900 PF11713 Peptidase C80 family V469_15900 PF11647 Membrane Localization Domain V469_15900 PF12146 Serine aminopeptidase, S33 V469_15915 PF03412 Peptidase C39 family V469_15915 PF00664 ABC transporter transmembrane region V469_15915 PF00005 ABC transporter V469_15925 PF03412 Peptidase C39 family V469_15925 PF00005 ABC transporter V469_15925 PF00664 ABC transporter transmembrane region V469_15930 PF00486 Transcriptional regulatory protein, C terminal V469_15930 PF00072 Response regulator receiver domain V469_15940 PF02685 Glucokinase V469_15945 PF01380 SIS domain V469_15945 PF01418 Helix-turn-helix domain, rpiR family V469_15950 PF02887 Pyruvate kinase, alpha/beta domain V469_15950 PF00224 Pyruvate kinase, barrel domain V469_15960 PF00873 AcrB/AcrD/AcrF family V469_15965 PF02770 Acyl-CoA dehydrogenase, middle domain V469_15965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain V469_15965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain V469_15965 PF09317 Domain of unknown function (DUF1974) V469_15970 PF00440 Bacterial regulatory proteins, tetR family V469_15985 PF00384 Molybdopterin oxidoreductase V469_15990 PF02634 FdhD/NarQ family V469_15995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_15995 PF03466 LysR substrate binding domain V469_16015 PF00936 BMC domain V469_16020 PF00936 BMC domain V469_16025 PF00936 BMC domain V469_16030 PF00465 Iron-containing alcohol dehydrogenase V469_16030 PF00171 Aldehyde dehydrogenase family V469_16040 PF00465 Iron-containing alcohol dehydrogenase V469_16040 PF00171 Aldehyde dehydrogenase family V469_16045 PF02901 Pyruvate formate lyase-like V469_16045 PF01228 Glycine radical V469_16050 PF04055 Radical SAM superfamily V469_16050 PF13187 4Fe-4S dicluster domain V469_16055 PF00936 BMC domain V469_16060 PF06130 Phosphate propanoyltransferase V469_16070 PF00893 Small Multidrug Resistance protein V469_16075 PF00893 Small Multidrug Resistance protein V469_16105 PF04074 YhcH/YjgK/YiaL V469_16110 PF00474 Sodium:solute symporter family V469_16115 PF00480 ROK family V469_16120 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase V469_16125 PF01418 Helix-turn-helix domain, rpiR family V469_16125 PF01380 SIS domain V469_16130 PF00701 Dihydrodipicolinate synthetase family V469_16135 PF00141 Peroxidase V469_16140 PF00455 DeoR C terminal sensor domain V469_16140 PF08220 DeoR-like helix-turn-helix domain V469_16145 PF07690 Major Facilitator Superfamily V469_16150 PF07881 L-fucose isomerase, first N-terminal domain V469_16150 PF07882 L-fucose isomerase, second N-terminal domain V469_16150 PF02952 L-fucose isomerase, C-terminal domain V469_16155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain V469_16155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain V469_16165 PF05025 RbsD / FucU transport protein family V469_16170 PF00465 Iron-containing alcohol dehydrogenase V469_16175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V469_16175 PF00005 ABC transporter V469_16180 PF12911 N-terminal TM domain of oligopeptide transport permease C V469_16180 PF00528 Binding-protein-dependent transport system inner membrane component V469_16185 PF00528 Binding-protein-dependent transport system inner membrane component V469_16190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V469_16200 PF03734 L,D-transpeptidase catalytic domain V469_16200 PF17969 L,D-transpeptidase C-terminal domain V469_16200 PF01476 LysM domain V469_16215 PF05971 RNA methyltransferase V469_16220 PF00877 NlpC/P60 family V469_16225 PF01648 4'-phosphopantetheinyl transferase superfamily V469_16230 PF00085 Thioredoxin V469_16240 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase V469_16245 PF00551 Formyl transferase V469_16245 PF01842 ACT domain V469_16255 PF13091 PLD-like domain V469_16255 PF13396 Phospholipase_D-nuclease N-terminal V469_16270 PF01551 Peptidase family M23 V469_16275 PF00128 Alpha amylase, catalytic domain V469_16280 PF01551 Peptidase family M23 V469_16280 PF01464 Transglycosylase SLT domain V469_16280 PF10145 Phage-related minor tail protein V469_16285 PF00230 Major intrinsic protein V469_16290 PF02075 Crossover junction endodeoxyribonuclease RuvC V469_16300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold V469_16320 PF04055 Radical SAM superfamily V469_16320 PF08497 Radical SAM N-terminal V469_16320 PF11842 Domain of unknown function (DUF3362) V469_16330 PF00873 AcrB/AcrD/AcrF family V469_16335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V469_16335 PF00529 HlyD membrane-fusion protein of T1SS V469_16340 PF00990 Diguanylate cyclase, GGDEF domain V469_16345 PF01734 Patatin-like phospholipase V469_16350 PF00209 Sodium:neurotransmitter symporter family V469_16365 PF01389 OmpA-like transmembrane domain V469_16365 PF00691 OmpA family V469_16370 PF00691 OmpA family V469_16370 PF01389 OmpA-like transmembrane domain V469_16375 PF00691 OmpA family V469_16375 PF01389 OmpA-like transmembrane domain V469_16380 PF03949 Malic enzyme, NAD binding domain V469_16380 PF00390 Malic enzyme, N-terminal domain V469_16385 PF12833 Helix-turn-helix domain V469_16390 PF01554 MatE V469_16395 PF10692 Protein of unknown function (DUF2498) V469_16400 PF00990 Diguanylate cyclase, GGDEF domain V469_16400 PF00072 Response regulator receiver domain V469_16405 PF00860 Permease family V469_16415 PF01235 Sodium:alanine symporter family V469_16420 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain V469_16420 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain V469_16425 PF01699 Sodium/calcium exchanger protein V469_16430 PF08534 Redoxin V469_16440 PF00293 NUDIX domain V469_16460 PF00005 ABC transporter V469_16465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase V469_16465 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase V469_16470 PF03932 CutC family V469_16475 PF00480 ROK family V469_16485 PF01435 Peptidase family M48 V469_16490 PF12849 PBP superfamily domain V469_16495 PF00512 His Kinase A (phospho-acceptor) domain V469_16495 PF00989 PAS fold V469_16495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_16495 PF11808 Phosphate regulon sensor protein PhoR V469_16500 PF00486 Transcriptional regulatory protein, C terminal V469_16500 PF00072 Response regulator receiver domain V469_16505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V469_16510 PF02515 CoA-transferase family III V469_16515 PF02770 Acyl-CoA dehydrogenase, middle domain V469_16515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain V469_16515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain V469_16520 PF01590 GAF domain V469_16520 PF02954 Bacterial regulatory protein, Fis family V469_16520 PF00158 Sigma-54 interaction domain V469_16525 PF00171 Aldehyde dehydrogenase family V469_16535 PF00892 EamA-like transporter family V469_16540 PF00072 Response regulator receiver domain V469_16540 PF12431 Transcriptional regulator V469_16545 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain V469_16545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_16545 PF17203 Single cache domain 3 V469_16545 PF00989 PAS fold V469_16550 PF03949 Malic enzyme, NAD binding domain V469_16550 PF00390 Malic enzyme, N-terminal domain V469_16555 PF03390 2-hydroxycarboxylate transporter family V469_16565 PF01047 MarR family V469_16570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V469_16570 PF00529 HlyD membrane-fusion protein of T1SS V469_16595 PF01679 Proteolipid membrane potential modulator V469_16605 PF13597 Anaerobic ribonucleoside-triphosphate reductase V469_16605 PF03477 ATP cone domain V469_16615 PF01653 NAD-dependent DNA ligase adenylation domain V469_16615 PF03120 NAD-dependent DNA ligase OB-fold domain V469_16615 PF03119 NAD-dependent DNA ligase C4 zinc finger domain V469_16615 PF12826 Helix-hairpin-helix motif V469_16615 PF00533 BRCA1 C Terminus (BRCT) domain V469_16620 PF04354 ZipA, C-terminal FtsZ-binding domain V469_16625 PF06470 SMC proteins Flexible Hinge Domain V469_16625 PF02463 RecF/RecN/SMC N terminal domain V469_16635 PF03458 UPF0126 domain V469_16645 PF05951 Bacterial protein of unknown function (DUF882) V469_16650 PF03734 L,D-transpeptidase catalytic domain V469_16650 PF01471 Putative peptidoglycan binding domain V469_16665 PF00535 Glycosyl transferase family 2 V469_16680 PF00128 Alpha amylase, catalytic domain V469_16690 PF00196 Bacterial regulatory proteins, luxR family V469_16690 PF00072 Response regulator receiver domain V469_16710 PF00999 Sodium/hydrogen exchanger family V469_16710 PF02254 TrkA-N domain V469_16710 PF02080 TrkA-C domain V469_16715 PF00990 Diguanylate cyclase, GGDEF domain V469_16720 PF11734 TilS substrate C-terminal domain V469_16720 PF09179 TilS substrate binding domain V469_16720 PF01171 PP-loop family V469_16725 PF01431 Peptidase family M13 V469_16725 PF05649 Peptidase family M13 V469_16735 PF00005 ABC transporter V469_16735 PF16326 ABC transporter C-terminal domain V469_16735 PF12848 ABC transporter V469_16740 PF13302 Acetyltransferase (GNAT) domain V469_16745 PF13520 Amino acid permease V469_16750 PF03466 LysR substrate binding domain V469_16750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_16755 PF12706 Beta-lactamase superfamily domain V469_16765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_16765 PF03466 LysR substrate binding domain V469_16775 PF08543 Phosphomethylpyrimidine kinase V469_16780 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain V469_16780 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain V469_16780 PF01276 Orn/Lys/Arg decarboxylase, major domain V469_16785 PF13520 Amino acid permease V469_16790 PF00486 Transcriptional regulatory protein, C terminal V469_16790 PF18500 CadC C-terminal domain 1 V469_16795 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit V469_16800 PF07733 Bacterial DNA polymerase III alpha NTPase domain V469_16800 PF02811 PHP domain V469_16800 PF01336 OB-fold nucleic acid binding domain V469_16800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain V469_16800 PF14579 Helix-hairpin-helix motif V469_16805 PF01351 Ribonuclease HII V469_16810 PF02684 Lipid-A-disaccharide synthetase V469_16815 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 V469_16815 PF00132 Bacterial transferase hexapeptide (six repeats) V469_16820 PF07977 FabA-like domain V469_16825 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD V469_16825 PF00132 Bacterial transferase hexapeptide (six repeats) V469_16830 PF03938 Outer membrane protein (OmpH-like) V469_16835 PF01103 Surface antigen V469_16835 PF07244 Surface antigen variable number repeat V469_16840 PF02163 Peptidase family M50 V469_16840 PF17820 PDZ domain V469_16850 PF13288 DXP reductoisomerase C-terminal domain V469_16850 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase V469_16850 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain V469_16860 PF01255 Putative undecaprenyl diphosphate synthase V469_16865 PF01765 Ribosome recycling factor V469_16870 PF00696 Amino acid kinase family V469_16875 PF00889 Elongation factor TS V469_16880 PF00318 Ribosomal protein S2 V469_16885 PF00557 Metallopeptidase family M24 V469_16890 PF01909 Nucleotidyltransferase domain V469_16890 PF01966 HD domain V469_16890 PF01842 ACT domain V469_16890 PF08335 GlnD PII-uridylyltransferase V469_16895 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal V469_16895 PF14602 Hexapeptide repeat of succinyl-transferase V469_16895 PF00132 Bacterial transferase hexapeptide (six repeats) V469_16900 PF11944 Protein of unknown function (DUF3461) V469_16905 PF00367 phosphotransferase system, EIIB V469_16905 PF02378 Phosphotransferase system, EIIC V469_16910 PF07148 Maltose operon periplasmic protein precursor (MalM) V469_16915 PF02264 LamB porin V469_16920 PF00258 Flavodoxin V469_16925 PF00849 RNA pseudouridylate synthase V469_16930 PF04287 tRNA pseudouridine synthase C V469_16955 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) V469_16960 PF07348 Syd protein (SUKH-2) V469_16965 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term V469_16965 PF14489 QueF-like protein V469_16975 PF07694 5TMR of 5TMR-LYT V469_16975 PF00990 Diguanylate cyclase, GGDEF domain V469_16980 PF11892 Domain of unknown function (DUF3412) V469_16980 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases V469_16980 PF03641 Possible lysine decarboxylase V469_16985 PF01367 5'-3' exonuclease, C-terminal SAM fold V469_16985 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain V469_16990 PF00180 Isocitrate/isopropylmalate dehydrogenase V469_16990 PF18324 Hypothetical protein TT1725 V469_17000 PF01728 FtsJ-like methyltransferase V469_17000 PF18125 RlmM ferredoxin-like domain V469_17005 PF04241 Protein of unknown function (DUF423) V469_17015 PF03466 LysR substrate binding domain V469_17015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_17020 PF00672 HAMP domain V469_17020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_17025 PF11798 IMS family HHH motif V469_17025 PF00817 impB/mucB/samB family V469_17025 PF11799 impB/mucB/samB family C-terminal domain V469_17040 PF02424 ApbE family V469_17045 PF00970 Oxidoreductase FAD-binding domain V469_17045 PF00111 2Fe-2S iron-sulfur cluster binding domain V469_17045 PF00175 Oxidoreductase NAD-binding domain V469_17050 PF02508 Rnf-Nqr subunit, membrane protein V469_17055 PF02508 Rnf-Nqr subunit, membrane protein V469_17060 PF04205 FMN-binding domain V469_17065 PF03116 NQR2, RnfD, RnfE family V469_17070 PF11973 NQRA C-terminal domain V469_17070 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) V469_17075 PF01722 BolA-like protein V469_17080 PF05175 Methyltransferase small domain V469_17090 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD V469_17100 PF07690 Major Facilitator Superfamily V469_17105 PF03502 Nucleoside-specific channel-forming protein, Tsx V469_17110 PF04461 Protein of unknown function (DUF520) V469_17115 PF08546 Ketopantoate reductase PanE/ApbA C terminal V469_17115 PF02558 Ketopantoate reductase PanE/ApbA V469_17120 PF01965 DJ-1/PfpI family V469_17125 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain V469_17125 PF00205 Thiamine pyrophosphate enzyme, central domain V469_17125 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain V469_17130 PF03306 Alpha-acetolactate decarboxylase V469_17135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_17135 PF03466 LysR substrate binding domain V469_17155 PF04717 Type VI secretion system, phage-baseplate injector V469_17160 PF05638 Type VI secretion system effector, Hcp V469_17165 PF03472 Autoinducer binding domain V469_17165 PF00196 Bacterial regulatory proteins, luxR family V469_17175 PF06965 Na+/H+ antiporter 1 V469_17175 PF13462 Thioredoxin V469_17180 PF16363 GDP-mannose 4,6 dehydratase V469_17185 PF00175 Oxidoreductase NAD-binding domain V469_17185 PF00042 Globin V469_17185 PF00970 Oxidoreductase FAD-binding domain V469_17190 PF03063 Prismane/CO dehydrogenase family V469_17195 PF00210 Ferritin-like domain V469_17235 PF00106 short chain dehydrogenase V469_17245 PF00875 DNA photolyase V469_17245 PF03441 FAD binding domain of DNA photolyase V469_17250 PF13411 MerR HTH family regulatory protein V469_17255 PF08349 Protein of unknown function (DUF1722) V469_17285 PF00800 Prephenate dehydratase V469_17285 PF01817 Chorismate mutase type II V469_17315 PF09588 YqaJ-like viral recombinase domain V469_17360 PF04002 RadC-like JAB domain V469_17370 PF04055 Radical SAM superfamily V469_17375 PF06508 Queuosine biosynthesis protein QueC V469_17395 PF09382 RQC domain V469_17395 PF16124 RecQ zinc-binding V469_17395 PF00570 HRDC domain V469_17395 PF00270 DEAD/DEAH box helicase V469_17395 PF00271 Helicase conserved C-terminal domain V469_17415 PF16124 RecQ zinc-binding V469_17415 PF00570 HRDC domain V469_17415 PF00271 Helicase conserved C-terminal domain V469_17415 PF00270 DEAD/DEAH box helicase V469_17415 PF09382 RQC domain V469_17420 PF00176 SNF2 family N-terminal domain V469_17420 PF12137 RNA polymerase recycling family C-terminal V469_17420 PF18339 RapA N-terminal Tudor like domain 1 V469_17420 PF00271 Helicase conserved C-terminal domain V469_17420 PF18337 RapA N-terminal Tudor like domain V469_17445 PF00593 TonB dependent receptor V469_17445 PF07715 TonB-dependent Receptor Plug Domain V469_17465 PF00005 ABC transporter V469_17470 PF00158 Sigma-54 interaction domain V469_17470 PF01590 GAF domain V469_17505 PF13649 Methyltransferase domain V469_17510 PF00872 Transposase, Mutator family V469_17530 PF03976 Polyphosphate kinase 2 (PPK2) V469_17535 PF01740 STAS domain V469_17535 PF00916 Sulfate permease family V469_17540 PF07995 Glucose / Sorbosone dehydrogenase V469_17550 PF02743 Cache domain V469_17550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_17550 PF00672 HAMP domain V469_17555 PF03573 outer membrane porin, OprD family V469_17560 PF00106 short chain dehydrogenase V469_17585 PF02074 Carboxypeptidase Taq (M32) metallopeptidase V469_17595 PF12833 Helix-turn-helix domain V469_17595 PF00730 HhH-GPD superfamily base excision DNA repair protein V469_17595 PF06029 AlkA N-terminal domain V469_17595 PF02805 Metal binding domain of Ada V469_17600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain V469_17600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain V469_17605 PF12392 Collagenase V469_17605 PF01136 Peptidase family U32 V469_17610 PF01810 LysE type translocator V469_17615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_17615 PF03466 LysR substrate binding domain V469_17625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_17625 PF00672 HAMP domain V469_17625 PF02743 Cache domain V469_17630 PF00072 Response regulator receiver domain V469_17640 PF01627 Hpt domain V469_17640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_17640 PF02895 Signal transducing histidine kinase, homodimeric domain V469_17640 PF01584 CheW-like domain V469_17640 PF07194 P2 response regulator binding domain V469_17645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_17645 PF12729 Four helix bundle sensory module for signal transduction V469_17645 PF00672 HAMP domain V469_17650 PF01584 CheW-like domain V469_17655 PF02203 Tar ligand binding domain homologue V469_17655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_17655 PF00672 HAMP domain V469_17660 PF01739 CheR methyltransferase, SAM binding domain V469_17660 PF03705 CheR methyltransferase, all-alpha domain V469_17665 PF03975 CheD chemotactic sensory transduction V469_17670 PF00072 Response regulator receiver domain V469_17670 PF01339 CheB methylesterase V469_17675 PF00266 Aminotransferase class-V V469_17705 PF00989 PAS fold V469_17705 PF00990 Diguanylate cyclase, GGDEF domain V469_17705 PF01590 GAF domain V469_17705 PF00563 EAL domain V469_17715 PF12838 4Fe-4S dicluster domain V469_17725 PF01168 Alanine racemase, N-terminal domain V469_17725 PF00842 Alanine racemase, C-terminal domain V469_17730 PF03796 DnaB-like helicase C terminal domain V469_17730 PF00772 DnaB-like helicase N terminal domain V469_17745 PF12792 CSS motif domain associated with EAL V469_17745 PF00563 EAL domain V469_17750 PF00149 Calcineurin-like phosphoesterase V469_17750 PF02872 5'-nucleotidase, C-terminal domain V469_17770 PF00158 Sigma-54 interaction domain V469_17770 PF00072 Response regulator receiver domain V469_17770 PF02954 Bacterial regulatory protein, Fis family V469_17775 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase V469_17775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase V469_17785 PF04102 SlyX V469_17790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase V469_17795 PF09526 Probable metal-binding protein (DUF2387) V469_17805 PF01584 CheW-like domain V469_17805 PF00072 Response regulator receiver domain V469_17810 PF00561 alpha/beta hydrolase fold V469_17815 PF00563 EAL domain V469_17815 PF01590 GAF domain V469_17815 PF00990 Diguanylate cyclase, GGDEF domain V469_17815 PF00360 Phytochrome region V469_17820 PF06794 Uncharacterised protein family (UPF0270) V469_17825 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain V469_17825 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain V469_17825 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain V469_17830 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family V469_17835 PF00535 Glycosyl transferase family 2 V469_17840 PF01370 NAD dependent epimerase/dehydratase family V469_17840 PF00551 Formyl transferase V469_17840 PF02911 Formyl transferase, C-terminal domain V469_17845 PF01522 Polysaccharide deacetylase V469_17850 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase V469_17855 PF00892 EamA-like transporter family V469_17860 PF00893 Small Multidrug Resistance protein V469_17865 PF00485 Phosphoribulokinase / Uridine kinase family V469_17880 PF02566 OsmC-like protein V469_17885 PF13545 Crp-like helix-turn-helix domain V469_17885 PF00027 Cyclic nucleotide-binding domain V469_17890 PF13847 Methyltransferase domain V469_17895 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading V469_17895 PF18416 N-acetylglucosamine binding protein domain 2 V469_17900 PF12561 ToxR activated gene A lipoprotein domain V469_17900 PF17945 Beta/Gamma crystallin V469_17905 PF00704 Glycosyl hydrolases family 18 V469_17905 PF08329 Chitinase A, N-terminal domain V469_17910 PF00512 His Kinase A (phospho-acceptor) domain V469_17910 PF00989 PAS fold V469_17910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_17920 PF13443 Cro/C1-type HTH DNA-binding domain V469_17925 PF12832 MFS_1 like family V469_17930 PF00593 TonB dependent receptor V469_17930 PF07715 TonB-dependent Receptor Plug Domain V469_17950 PF01243 Pyridoxamine 5'-phosphate oxidase V469_17955 PF06228 Haem utilisation ChuX/HutX V469_17965 PF01032 FecCD transport family V469_17970 PF00005 ABC transporter V469_17980 PF01370 NAD dependent epimerase/dehydratase family V469_17990 PF01791 DeoC/LacD family aldolase V469_17995 PF01773 Na+ dependent nucleoside transporter N-terminus V469_17995 PF07662 Na+ dependent nucleoside transporter C-terminus V469_17995 PF07670 Nucleoside recognition V469_18000 PF01048 Phosphorylase superfamily V469_18005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_18005 PF03466 LysR substrate binding domain V469_18020 PF01464 Transglycosylase SLT domain V469_18025 PF01048 Phosphorylase superfamily V469_18125 PF01343 Peptidase family S49 V469_18140 PF03354 Phage Terminase V469_18185 PF00004 ATPase family associated with various cellular activities (AAA) V469_18190 PF01555 DNA methylase V469_18275 PF01381 Helix-turn-helix V469_18275 PF00717 Peptidase S24-like V469_18320 PF12167 Arm DNA-binding domain V469_18320 PF00589 Phage integrase family V469_18325 PF12848 ABC transporter V469_18325 PF00005 ABC transporter V469_18335 PF00860 Permease family V469_18340 PF05099 Tellurite resistance protein TerB V469_18340 PF00226 DnaJ domain V469_18345 PF00483 Nucleotidyl transferase V469_18355 PF04453 LPS transport system D V469_18355 PF03968 OstA-like protein V469_18360 PF09312 SurA N-terminal domain V469_18360 PF00639 PPIC-type PPIASE domain V469_18365 PF04166 Pyridoxal phosphate biosynthetic protein PdxA V469_18370 PF00398 Ribosomal RNA adenine dimethylase V469_18375 PF04379 ApaG domain V469_18380 PF00149 Calcineurin-like phosphoesterase V469_18390 PF00296 Luciferase-like monooxygenase V469_18410 PF13193 AMP-binding enzyme C-terminal domain V469_18410 PF00501 AMP-binding enzyme V469_18420 PF01926 50S ribosome-binding GTPase V469_18420 PF01018 GTP1/OBG V469_18425 PF01016 Ribosomal L27 protein V469_18430 PF00829 Ribosomal prokaryotic L21 protein V469_18435 PF00348 Polyprenyl synthetase V469_18440 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) V469_18445 PF01145 SPFH domain / Band 7 family V469_18450 PF12221 Bacterial membrane protein N terminal V469_18450 PF01145 SPFH domain / Band 7 family V469_18455 PF16360 GTP-binding GTPase Middle Region V469_18455 PF13167 GTP-binding GTPase N-terminal V469_18455 PF01926 50S ribosome-binding GTPase V469_18460 PF17209 Hfq protein V469_18470 PF01119 DNA mismatch repair protein, C-terminal domain V469_18470 PF08676 MutL C terminal dimerisation domain V469_18480 PF01520 N-acetylmuramoyl-L-alanine amidase V469_18485 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE V469_18490 PF01256 Carbohydrate kinase V469_18490 PF03853 YjeF-related protein N-terminus V469_18495 PF08331 Domain of unknown function (DUF1730) V469_18500 PF00480 ROK family V469_18505 PF01966 HD domain V469_18505 PF13286 Phosphohydrolase-associated domain V469_18510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_18510 PF00072 Response regulator receiver domain V469_18510 PF18415 Histidine kinase receptor ArcB trans-membrane domain V469_18510 PF01627 Hpt domain V469_18510 PF00512 His Kinase A (phospho-acceptor) domain V469_18510 PF00989 PAS fold V469_18530 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) V469_18535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_18535 PF03466 LysR substrate binding domain V469_18545 PF01259 SAICAR synthetase V469_18550 PF06804 NlpB/DapX lipoprotein V469_18555 PF00701 Dihydrodipicolinate synthetase family V469_18560 PF01842 ACT domain V469_18565 PF00578 AhpC/TSA family V469_18570 PF03887 YfbU domain V469_18575 PF04217 Protein of unknown function, DUF412 V469_18580 PF00871 Acetokinase family V469_18585 PF07085 DRTGG domain V469_18585 PF01515 Phosphate acetyl/butaryl transferase V469_18590 PF10369 Small subunit of acetolactate synthase V469_18595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain V469_18595 PF00205 Thiamine pyrophosphate enzyme, central domain V469_18595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain V469_18610 PF01569 PAP2 superfamily V469_18620 PF08502 LeuA allosteric (dimerisation) domain V469_18620 PF00682 HMGL-like V469_18625 PF00180 Isocitrate/isopropylmalate dehydrogenase V469_18630 PF00330 Aconitase family (aconitate hydratase) V469_18635 PF00694 Aconitase C-terminal domain V469_18655 PF00528 Binding-protein-dependent transport system inner membrane component V469_18660 PF00005 ABC transporter V469_18665 PF02562 PhoH-like protein V469_18665 PF13638 PIN domain V469_18675 PF02867 Ribonucleotide reductase, barrel domain V469_18675 PF00317 Ribonucleotide reductase, all-alpha domain V469_18675 PF08343 Ribonucleotide reductase N-terminal V469_18710 PF12137 RNA polymerase recycling family C-terminal V469_18710 PF00176 SNF2 family N-terminal domain V469_18710 PF18339 RapA N-terminal Tudor like domain 1 V469_18710 PF18337 RapA N-terminal Tudor like domain V469_18710 PF00271 Helicase conserved C-terminal domain V469_18715 PF00849 RNA pseudouridylate synthase V469_18725 PF13188 PAS domain V469_18725 PF03707 Bacterial signalling protein N terminal repeat V469_18725 PF00990 Diguanylate cyclase, GGDEF domain V469_18725 PF00563 EAL domain V469_18735 PF00118 TCP-1/cpn60 chaperonin family V469_18740 PF00166 Chaperonin 10 Kd subunit V469_18745 PF01554 MatE V469_18750 PF04186 FxsA cytoplasmic membrane protein V469_18755 PF00206 Lyase V469_18755 PF10415 Fumarase C C-terminus V469_18760 PF03605 Anaerobic c4-dicarboxylate membrane transporter V469_18765 PF00267 Gram-negative porin V469_18770 PF07690 Major Facilitator Superfamily V469_18775 PF03466 LysR substrate binding domain V469_18775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_18780 PF01447 Thermolysin metallopeptidase, catalytic domain V469_18780 PF03413 Peptidase propeptide and YPEB domain V469_18780 PF04151 Bacterial pre-peptidase C-terminal domain V469_18780 PF07504 Fungalysin/Thermolysin Propeptide Motif V469_18780 PF02868 Thermolysin metallopeptidase, alpha-helical domain V469_18795 PF13302 Acetyltransferase (GNAT) domain V469_18805 PF02894 Oxidoreductase family, C-terminal alpha/beta domain V469_18805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold V469_18810 PF07690 Major Facilitator Superfamily V469_18815 PF01725 Ham1 family V469_18820 PF06969 HemN C-terminal domain V469_18820 PF04055 Radical SAM superfamily V469_18825 PF03889 Alternative ribosome-rescue factor A V469_18830 PF01872 RibD C-terminal domain V469_18835 PF13411 MerR HTH family regulatory protein V469_18840 PF02142 MGS-like domain V469_18840 PF01808 AICARFT/IMPCHase bienzyme V469_18845 PF02844 Phosphoribosylglycinamide synthetase, N domain V469_18845 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain V469_18845 PF02843 Phosphoribosylglycinamide synthetase, C domain V469_18860 PF00128 Alpha amylase, catalytic domain V469_18875 PF00140 Sigma-70 factor, region 1.2 V469_18875 PF03979 Sigma-70 factor, region 1.1 V469_18875 PF04545 Sigma-70, region 4 V469_18875 PF04542 Sigma-70 region 2 V469_18875 PF04539 Sigma-70 region 3 V469_18875 PF04546 Sigma-70, non-essential region V469_18880 PF10410 DnaB-helicase binding domain of primase V469_18880 PF01807 CHC2 zinc finger V469_18880 PF08278 DNA primase DnaG DnaB-binding V469_18880 PF08275 DNA primase catalytic core, N-terminal domain V469_18885 PF09424 Yqey-like protein V469_18890 PF01165 Ribosomal protein S21 V469_18895 PF00814 Glycoprotease family V469_18900 PF04542 Sigma-70 region 2 V469_18900 PF04539 Sigma-70 region 3 V469_18900 PF04545 Sigma-70, region 4 V469_18900 PF00140 Sigma-70 factor, region 1.2 V469_18905 PF01551 Peptidase family M23 V469_18905 PF01476 LysM domain V469_18910 PF09335 SNARE associated Golgi protein V469_18920 PF01975 Survival protein SurE V469_18925 PF01142 tRNA pseudouridine synthase D (TruD) V469_18930 PF02542 YgbB family V469_18935 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase V469_18940 PF04977 Septum formation initiator V469_18945 PF00113 Enolase, C-terminal TIM barrel domain V469_18945 PF03952 Enolase, N-terminal domain V469_18950 PF06418 CTP synthase N-terminus V469_18950 PF00117 Glutamine amidotransferase class-I V469_18955 PF03819 MazG nucleotide pyrophosphohydrolase domain V469_18960 PF02824 TGS domain V469_18960 PF13291 ACT domain V469_18960 PF04607 Region found in RelA / SpoT proteins V469_18965 PF05958 tRNA (Uracil-5-)-methyltransferase V469_18965 PF01938 TRAM domain V469_18970 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) V469_18970 PF01627 Hpt domain V469_18970 PF00672 HAMP domain V469_18970 PF00072 Response regulator receiver domain V469_18970 PF00512 His Kinase A (phospho-acceptor) domain V469_18970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_18975 PF07308 Protein of unknown function (DUF1456) V469_18980 PF01510 N-acetylmuramoyl-L-alanine amidase V469_18985 PF00455 DeoR C terminal sensor domain V469_18985 PF08220 DeoR-like helix-turn-helix domain V469_18990 PF08013 Tagatose 6 phosphate kinase V469_18995 PF01380 SIS domain V469_19000 PF03830 PTS system sorbose subfamily IIB component V469_19005 PF03609 PTS system sorbose-specific iic component V469_19010 PF03613 PTS system mannose/fructose/sorbose family IID component V469_19015 PF03610 PTS system fructose IIA component V469_19020 PF01979 Amidohydrolase family V469_19025 PF01116 Fructose-bisphosphate aldolase class-II V469_19035 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ V469_19040 PF11967 Recombination protein O N terminal V469_19040 PF02565 Recombination protein O C terminal V469_19045 PF01926 50S ribosome-binding GTPase V469_19045 PF07650 KH domain V469_19050 PF00035 Double-stranded RNA binding motif V469_19050 PF14622 Ribonuclease-III-like V469_19055 PF10502 Signal peptidase, peptidase S26 V469_19060 PF06421 GTP-binding protein LepA C-terminus V469_19060 PF03144 Elongation factor Tu domain 2 V469_19060 PF00679 Elongation factor G C-terminus V469_19060 PF00009 Elongation factor Tu GTP binding domain V469_19070 PF03888 MucB/RseB N-terminal domain V469_19070 PF17188 MucB/RseB C-terminal domain V469_19075 PF03873 Anti sigma-E protein RseA, C-terminal domain V469_19075 PF03872 Anti sigma-E protein RseA, N-terminal domain V469_19080 PF04542 Sigma-70 region 2 V469_19080 PF08281 Sigma-70, region 4 V469_19085 PF02910 Fumarate reductase flavoprotein C-term V469_19085 PF00890 FAD binding domain V469_19095 PF03937 Flavinator of succinate dehydrogenase V469_19100 PF01571 Aminomethyltransferase folate-binding domain V469_19105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_19105 PF03466 LysR substrate binding domain V469_19120 PF03091 CutA1 divalent ion tolerance protein V469_19125 PF02683 Cytochrome C biogenesis protein transmembrane region V469_19125 PF11412 Disulphide bond corrector protein DsbC V469_19135 PF01266 FAD dependent oxidoreductase V469_19140 PF01116 Fructose-bisphosphate aldolase class-II V469_19145 PF00162 Phosphoglycerate kinase V469_19150 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain V469_19150 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain V469_19155 PF00480 ROK family V469_19160 PF01208 Uroporphyrinogen decarboxylase (URO-D) V469_19165 PF09297 NADH pyrophosphatase zinc ribbon domain V469_19165 PF00293 NUDIX domain V469_19170 PF18327 Proline utilization A proline dehydrogenase N-terminal domain V469_19170 PF01619 Proline dehydrogenase V469_19170 PF14850 DNA-binding domain of Proline dehydrogenase V469_19170 PF00171 Aldehyde dehydrogenase family V469_19175 PF08239 Bacterial SH3 domain V469_19180 PF00520 Ion transport protein V469_19180 PF00027 Cyclic nucleotide-binding domain V469_19185 PF02743 Cache domain V469_19185 PF00672 HAMP domain V469_19185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_19195 PF03710 Glutamate-ammonia ligase adenylyltransferase V469_19195 PF08335 GlnD PII-uridylyltransferase V469_19215 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain V469_19215 PF00326 Prolyl oligopeptidase family V469_19220 PF00291 Pyridoxal-phosphate dependent enzyme V469_19225 PF00528 Binding-protein-dependent transport system inner membrane component V469_19230 PF00528 Binding-protein-dependent transport system inner membrane component V469_19235 PF00005 ABC transporter V469_19240 PF00497 Bacterial extracellular solute-binding proteins, family 3 V469_19245 PF00005 ABC transporter V469_19245 PF12704 MacB-like periplasmic core domain V469_19245 PF02687 FtsX-like permease family V469_19250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V469_19255 PF00072 Response regulator receiver domain V469_19255 PF00486 Transcriptional regulatory protein, C terminal V469_19260 PF16527 Two-component sensor protein CpxA, periplasmic domain V469_19260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_19260 PF00672 HAMP domain V469_19260 PF00512 His Kinase A (phospho-acceptor) domain V469_19265 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain V469_19265 PF09297 NADH pyrophosphatase zinc ribbon domain V469_19265 PF00293 NUDIX domain V469_19300 PF03060 Nitronate monooxygenase V469_19310 PF00445 Ribonuclease T2 family V469_19325 PF03150 Di-haem cytochrome c peroxidase V469_19325 PF00034 Cytochrome c V469_19330 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase V469_19345 PF03466 LysR substrate binding domain V469_19345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_19350 PF00270 DEAD/DEAH box helicase V469_19350 PF00271 Helicase conserved C-terminal domain V469_19360 PF00753 Metallo-beta-lactamase superfamily V469_19380 PF01425 Amidase V469_19385 PF04371 Porphyromonas-type peptidyl-arginine deiminase V469_19390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_19390 PF03466 LysR substrate binding domain V469_19400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family V469_19405 PF00583 Acetyltransferase (GNAT) family V469_19425 PF00009 Elongation factor Tu GTP binding domain V469_19425 PF03144 Elongation factor Tu domain 2 V469_19425 PF16658 Class II release factor RF3, C-terminal domain V469_19430 PF00990 Diguanylate cyclase, GGDEF domain V469_19430 PF00072 Response regulator receiver domain V469_19435 PF00990 Diguanylate cyclase, GGDEF domain V469_19435 PF13426 PAS domain V469_19435 PF00563 EAL domain V469_19440 PF05762 VWA domain containing CoxE-like protein V469_19445 PF12592 Protein of unknown function (DUF3763) V469_19445 PF17868 AAA lid domain V469_19445 PF07728 AAA domain (dynein-related subfamily) V469_19455 PF00583 Acetyltransferase (GNAT) family V469_19465 PF00501 AMP-binding enzyme V469_19475 PF04262 Glutamate-cysteine ligase V469_19480 PF00675 Insulinase (Peptidase family M16) V469_19480 PF05193 Peptidase M16 inactive domain V469_19485 PF09335 SNARE associated Golgi protein V469_19490 PF08659 KR domain V469_19490 PF08990 Erythronolide synthase docking V469_19490 PF08240 Alcohol dehydrogenase GroES-like domain V469_19490 PF16197 Ketoacyl-synthetase C-terminal extension V469_19490 PF14765 Polyketide synthase dehydratase V469_19490 PF00698 Acyl transferase domain V469_19490 PF00550 Phosphopantetheine attachment site V469_19490 PF00109 Beta-ketoacyl synthase, N-terminal domain V469_19490 PF02801 Beta-ketoacyl synthase, C-terminal domain V469_19510 PF00970 Oxidoreductase FAD-binding domain V469_19510 PF00175 Oxidoreductase NAD-binding domain V469_19515 PF03948 Ribosomal protein L9, C-terminal domain V469_19515 PF01281 Ribosomal protein L9, N-terminal domain V469_19520 PF01084 Ribosomal protein S18 V469_19525 PF01250 Ribosomal protein S6 V469_19530 PF01566 Natural resistance-associated macrophage protein V469_19550 PF13673 Acetyltransferase (GNAT) domain V469_19560 PF00588 SpoU rRNA Methylase family V469_19560 PF08032 RNA 2'-O ribose methyltransferase substrate binding V469_19565 PF00575 S1 RNA binding domain V469_19565 PF08206 Ribonuclease B OB domain V469_19565 PF00773 RNB domain V469_19565 PF08461 Ribonuclease R winged-helix domain V469_19565 PF17876 Cold shock domain V469_19570 PF00990 Diguanylate cyclase, GGDEF domain V469_19575 PF02664 S-Ribosylhomocysteinase (LuxS) V469_19585 PF00543 Nitrogen regulatory protein P-II V469_19590 PF00795 Carbon-nitrogen hydrolase V469_19590 PF02540 NAD synthase V469_19625 PF05567 Neisseria PilC beta-propeller domain V469_19650 PF02401 LytB protein V469_19655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase V469_19660 PF01252 Signal peptidase (SPase) II V469_19665 PF06827 Zinc finger found in FPG and IleRS V469_19665 PF08264 Anticodon-binding domain of tRNA V469_19665 PF00133 tRNA synthetases class I (I, L, M and V) V469_19670 PF01687 Riboflavin kinase V469_19670 PF06574 FAD synthetase V469_19675 PF03023 Lipid II flippase MurJ V469_19680 PF01649 Ribosomal protein S20 V469_19685 PF01022 Bacterial regulatory protein, arsR family V469_19690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_19690 PF03466 LysR substrate binding domain V469_19700 PF06965 Na+/H+ antiporter 1 V469_19705 PF00303 Thymidylate synthase V469_19710 PF01790 Prolipoprotein diacylglyceryl transferase V469_19715 PF00391 PEP-utilising enzyme, mobile domain V469_19715 PF01590 GAF domain V469_19715 PF02896 PEP-utilising enzyme, TIM barrel domain V469_19715 PF05524 PEP-utilising enzyme, N-terminal V469_19720 PF00293 NUDIX domain V469_19725 PF02976 DNA mismatch repair enzyme MutH V469_19735 PF01245 Ribosomal protein L19 V469_19740 PF01746 tRNA (Guanine-1)-methyltransferase V469_19745 PF05239 PRC-barrel domain V469_19745 PF01782 RimM N-terminal domain V469_19750 PF00886 Ribosomal protein S16 V469_19755 PF02978 Signal peptide binding domain V469_19755 PF02881 SRP54-type protein, helical bundle domain V469_19755 PF00448 SRP54-type protein, GTPase domain V469_19760 PF01578 Cytochrome C assembly protein V469_19765 PF01595 Cyclin M transmembrane N-terminal domain V469_19765 PF00571 CBS domain V469_19765 PF03471 Transporter associated domain V469_19770 PF02082 Transcriptional regulator V469_19775 PF00042 Globin V469_19775 PF00175 Oxidoreductase NAD-binding domain V469_19775 PF00970 Oxidoreductase FAD-binding domain V469_19780 PF08238 Sel1 repeat V469_19785 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain V469_19785 PF00056 lactate/malate dehydrogenase, NAD binding domain V469_19790 PF00528 Binding-protein-dependent transport system inner membrane component V469_19795 PF00528 Binding-protein-dependent transport system inner membrane component V469_19800 PF00497 Bacterial extracellular solute-binding proteins, family 3 V469_19805 PF00005 ABC transporter V469_19810 PF01316 Arginine repressor, DNA binding domain V469_19810 PF02863 Arginine repressor, C-terminal domain V469_19815 PF04261 Dyp-type peroxidase family V469_19820 PF08402 TOBE domain V469_19820 PF00005 ABC transporter V469_19830 PF13416 Bacterial extracellular solute-binding protein V469_19835 PF00543 Nitrogen regulatory protein P-II V469_19840 PF00472 RF-1 domain V469_19845 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain V469_19845 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain V469_19850 PF01773 Na+ dependent nucleoside transporter N-terminus V469_19850 PF07662 Na+ dependent nucleoside transporter C-terminus V469_19850 PF07670 Nucleoside recognition V469_19855 PF03466 LysR substrate binding domain V469_19855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_19860 PF00255 Glutathione peroxidase V469_19870 PF02595 Glycerate kinase family V469_19875 PF02447 GntP family permease V469_19880 PF13556 PucR C-terminal helix-turn-helix domain V469_19880 PF05651 Putative sugar diacid recognition V469_19880 PF17853 GGDEF-like domain V469_19890 PF06062 Uncharacterised protein family (UPF0231) V469_19905 PF08447 PAS fold V469_19905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_19910 PF03372 Endonuclease/Exonuclease/phosphatase family V469_19925 PF00270 DEAD/DEAH box helicase V469_19925 PF00271 Helicase conserved C-terminal domain V469_19935 PF08534 Redoxin V469_19940 PF00403 Heavy-metal-associated domain V469_19945 PF18494 Pullulanase Ins domain V469_19945 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) V469_19945 PF03714 Bacterial pullanase-associated domain V469_19945 PF11852 Domain of unknown function (DUF3372) V469_19945 PF17967 Pullulanase N2 domain V469_19960 PF02583 Metal-sensitive transcriptional repressor V469_19965 PF00155 Aminotransferase class I and II V469_19970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_19970 PF03466 LysR substrate binding domain V469_19980 PF04055 Radical SAM superfamily V469_19985 PF11230 Protein of unknown function (DUF3029) V469_20005 PF07676 WD40-like Beta Propeller Repeat V469_20005 PF03572 Peptidase family S41 V469_20005 PF14685 Tricorn protease PDZ domain V469_20005 PF14684 Tricorn protease C1 domain V469_20035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_20035 PF12729 Four helix bundle sensory module for signal transduction V469_20035 PF00672 HAMP domain V469_20040 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading V469_20040 PF18416 N-acetylglucosamine binding protein domain 2 V469_20045 PF03466 LysR substrate binding domain V469_20045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_20055 PF12857 TOBE-like domain V469_20055 PF00005 ABC transporter V469_20060 PF00528 Binding-protein-dependent transport system inner membrane component V469_20065 PF00528 Binding-protein-dependent transport system inner membrane component V469_20080 PF13194 Domain of unknown function (DUF4010) V469_20085 PF12464 Maltose acetyltransferase V469_20085 PF14602 Hexapeptide repeat of succinyl-transferase V469_20110 PF14698 Argininosuccinate lyase C-terminal V469_20110 PF00206 Lyase V469_20115 PF00764 Arginosuccinate synthase V469_20120 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain V469_20120 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain V469_20125 PF00696 Amino acid kinase family V469_20130 PF01118 Semialdehyde dehydrogenase, NAD binding domain V469_20130 PF02774 Semialdehyde dehydrogenase, dimerisation domain V469_20135 PF07687 Peptidase dimerisation domain V469_20135 PF01546 Peptidase family M20/M25/M40 V469_20140 PF00311 Phosphoenolpyruvate carboxylase V469_20150 PF03447 Homoserine dehydrogenase, NAD binding domain V469_20150 PF00696 Amino acid kinase family V469_20150 PF00742 Homoserine dehydrogenase V469_20155 PF01053 Cys/Met metabolism PLP-dependent enzyme V469_20160 PF01340 Met Apo-repressor, MetJ V469_20165 PF12833 Helix-turn-helix domain V469_20165 PF06445 GyrI-like small molecule binding domain V469_20170 PF01588 Putative tRNA binding domain V469_20175 PF03222 Tryptophan/tyrosine permease family V469_20180 PF00459 Inositol monophosphatase family V469_20185 PF00293 NUDIX domain V469_20190 PF13419 Haloacid dehalogenase-like hydrolase V469_20195 PF01479 S4 domain V469_20195 PF00579 tRNA synthetases class I (W and Y) V469_20200 PF00196 Bacterial regulatory proteins, luxR family V469_20205 PF01203 Type II secretion system (T2SS), protein N V469_20210 PF04612 Type II secretion system (T2SS), protein M V469_20215 PF12693 GspL periplasmic domain V469_20215 PF05134 Type II secretion system (T2SS), protein L V469_20220 PF03934 Type II secretion system (T2SS), protein K V469_20225 PF07963 Prokaryotic N-terminal methylation motif V469_20225 PF11612 Type II secretion system (T2SS), protein J V469_20230 PF02501 Type II secretion system (T2SS), protein I V469_20230 PF07963 Prokaryotic N-terminal methylation motif V469_20235 PF12019 Type II transport protein GspH V469_20235 PF07963 Prokaryotic N-terminal methylation motif V469_20245 PF07963 Prokaryotic N-terminal methylation motif V469_20245 PF08334 Type II secretion system (T2SS), protein G V469_20250 PF00482 Type II secretion system (T2SS), protein F V469_20255 PF00437 Type II/IV secretion system protein V469_20260 PF03958 Bacterial type II/III secretion system short domain V469_20260 PF00263 Bacterial type II and III secretion system protein V469_20265 PF11356 Type II secretion system protein C V469_20270 PF01479 S4 domain V469_20275 PF01430 Hsp33 protein V469_20285 PF00392 Bacterial regulatory proteins, gntR family V469_20290 PF01321 Creatinase/Prolidase N-terminal domain V469_20290 PF00557 Metallopeptidase family M24 V469_20295 PF11756 Nitrous oxide-stimulated promoter V469_20300 PF00583 Acetyltransferase (GNAT) family V469_20305 PF05433 Glycine zipper 2TM domain V469_20310 PF00149 Calcineurin-like phosphoesterase V469_20310 PF02872 5'-nucleotidase, C-terminal domain V469_20315 PF01810 LysE type translocator V469_20325 PF00765 Autoinducer synthase V469_20330 PF03466 LysR substrate binding domain V469_20330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_20335 PF17876 Cold shock domain V469_20335 PF00773 RNB domain V469_20335 PF08206 Ribonuclease B OB domain V469_20340 PF00440 Bacterial regulatory proteins, tetR family V469_20355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit V469_20355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 V469_20355 PF02378 Phosphotransferase system, EIIC V469_20360 PF08125 Mannitol dehydrogenase C-terminal domain V469_20360 PF01232 Mannitol dehydrogenase Rossmann domain V469_20365 PF05068 Mannitol repressor V469_20370 PF02080 TrkA-C domain V469_20370 PF00999 Sodium/hydrogen exchanger family V469_20370 PF03471 Transporter associated domain V469_20390 PF01544 CorA-like Mg2+ transporter protein V469_20410 PF04307 LexA-binding, inner membrane-associated putative hydrolase V469_20415 PF01773 Na+ dependent nucleoside transporter N-terminus V469_20415 PF07662 Na+ dependent nucleoside transporter C-terminus V469_20415 PF07670 Nucleoside recognition V469_20420 PF03880 DbpA RNA binding domain V469_20420 PF00270 DEAD/DEAH box helicase V469_20420 PF00271 Helicase conserved C-terminal domain V469_20445 PF01040 UbiA prenyltransferase family V469_20450 PF00425 chorismate binding enzyme V469_20455 PF16582 Middle domain of thiamine pyrophosphate V469_20455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain V469_20455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain V469_20460 PF12697 Alpha/beta hydrolase family V469_20465 PF00378 Enoyl-CoA hydratase/isomerase V469_20470 PF13378 Enolase C-terminal domain-like V469_20475 PF00501 AMP-binding enzyme V469_20485 PF00419 Fimbrial protein V469_20490 PF00419 Fimbrial protein V469_20495 PF02753 Pili assembly chaperone PapD, C-terminal domain V469_20495 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain V469_20500 PF13954 PapC N-terminal domain V469_20500 PF13953 PapC C-terminal domain V469_20500 PF00577 Outer membrane usher protein V469_20510 PF00419 Fimbrial protein V469_20520 PF08453 Peptidase family M9 N-terminal V469_20520 PF01752 Collagenase V469_20525 PF02698 DUF218 domain V469_20530 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain V469_20530 PF02777 Iron/manganese superoxide dismutases, C-terminal domain V469_20540 PF00561 alpha/beta hydrolase fold V469_20545 PF03280 Proteobacterial lipase chaperone protein V469_20560 PF12793 Sugar transport-related sRNA regulator N-term V469_20560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V469_20570 PF01053 Cys/Met metabolism PLP-dependent enzyme V469_20580 PF00465 Iron-containing alcohol dehydrogenase V469_20595 PF03577 Peptidase family C69 V469_20600 PF00106 short chain dehydrogenase V469_20620 PF02308 MgtC family V469_20625 PF02903 Alpha amylase, N-terminal ig-like domain V469_20625 PF00128 Alpha amylase, catalytic domain V469_20625 PF16657 Maltogenic Amylase, C-terminal domain V469_20640 PF00884 Sulfatase V469_20645 PF01037 Lrp/AsnC ligand binding domain V469_20655 PF04204 Homoserine O-succinyltransferase V469_20660 PF01966 HD domain V469_20660 PF12072 Domain of unknown function (DUF3552) V469_20660 PF00013 KH domain V469_20665 PF00994 Probable molybdopterin binding domain V469_20665 PF02464 Competence-damaged protein V469_20680 PF00005 ABC transporter V469_20700 PF07722 Peptidase C26 V469_20710 PF13545 Crp-like helix-turn-helix domain V469_20710 PF00027 Cyclic nucleotide-binding domain V469_20720 PF13419 Haloacid dehalogenase-like hydrolase V469_20725 PF02899 Phage integrase, N-terminal SAM-like domain V469_20725 PF00589 Phage integrase family V469_20735 PF01678 Diaminopimelate epimerase V469_20740 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain V469_20740 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain V469_20745 PF01491 Frataxin-like domain V469_20750 PF02230 Phospholipase/Carboxylesterase V469_20755 PF12633 Adenylate cyclase NT domain V469_20755 PF01295 Adenylate cyclase, class-I V469_20760 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain V469_20760 PF03900 Porphobilinogen deaminase, C-terminal domain V469_20765 PF02602 Uroporphyrinogen-III synthase HemD V469_20770 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase V469_20780 PF03692 Putative zinc- or iron-chelating domain V469_20785 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded V469_20800 PF00593 TonB dependent receptor V469_20800 PF07715 TonB-dependent Receptor Plug Domain V469_20825 PF01638 HxlR-like helix-turn-helix V469_20830 PF08803 Putative mono-oxygenase ydhR V469_20845 PF06055 Exopolysaccharide synthesis, ExoD V469_20855 PF00990 Diguanylate cyclase, GGDEF domain V469_20855 PF17151 Periplasmic sensor domain V469_20870 PF13036 Peptidoglycan-synthase activator LpoB V469_20885 PF06968 Biotin and Thiamin Synthesis associated domain V469_20885 PF04055 Radical SAM superfamily V469_20890 PF05690 Thiazole biosynthesis protein ThiG V469_20900 PF00899 ThiF family V469_20905 PF02581 Thiamine monophosphate synthase V469_20910 PF01964 Radical SAM ThiC family V469_20910 PF13667 ThiC-associated domain V469_20915 PF03440 Aerolysin/Pertussis toxin (APT) domain V469_20915 PF01117 Aerolysin toxin V469_20930 PF00486 Transcriptional regulatory protein, C terminal V469_20930 PF00072 Response regulator receiver domain V469_20940 PF05525 Branched-chain amino acid transport protein V469_20945 PF08443 RimK-like ATP-grasp domain V469_20945 PF18030 RimK PreATP-grasp domain V469_20950 PF02607 B12 binding domain V469_20950 PF02574 Homocysteine S-methyltransferase V469_20950 PF02310 B12 binding domain V469_20950 PF00809 Pterin binding enzyme V469_20950 PF02965 Vitamin B12 dependent methionine synthase, activation domain V469_20955 PF00999 Sodium/hydrogen exchanger family V469_20990 PF04320 Protein with unknown function (DUF469) V469_20995 PF00419 Fimbrial protein V469_21000 PF01389 OmpA-like transmembrane domain V469_21000 PF00691 OmpA family V469_21005 PF13954 PapC N-terminal domain V469_21005 PF00577 Outer membrane usher protein V469_21005 PF13953 PapC C-terminal domain V469_21010 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain V469_21010 PF02753 Pili assembly chaperone PapD, C-terminal domain V469_21030 PF00419 Fimbrial protein V469_21060 PF08668 HDOD domain V469_21070 PF04228 Putative neutral zinc metallopeptidase V469_21075 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) V469_21090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V469_21090 PF13426 PAS domain V469_21090 PF08447 PAS fold V469_21095 PF08678 Rsbr N terminal V469_21095 PF01740 STAS domain V469_21100 PF13581 Histidine kinase-like ATPase domain V469_21105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_21105 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) V469_21105 PF01627 Hpt domain V469_21105 PF00072 Response regulator receiver domain V469_21105 PF00512 His Kinase A (phospho-acceptor) domain V469_21105 PF00672 HAMP domain V469_21110 PF00072 Response regulator receiver domain V469_21120 PF07690 Major Facilitator Superfamily V469_21125 PF01914 MarC family integral membrane protein V469_21135 PF13580 SIS domain V469_21140 PF00367 phosphotransferase system, EIIB V469_21140 PF02378 Phosphotransferase system, EIIC V469_21155 PF01380 SIS domain V469_21155 PF01418 Helix-turn-helix domain, rpiR family V469_21160 PF01523 Putative modulator of DNA gyrase V469_21165 PF00795 Carbon-nitrogen hydrolase V469_21175 PF13116 Protein of unknown function V469_21175 PF13502 AsmA-like C-terminal region V469_21180 PF00575 S1 RNA binding domain V469_21180 PF10150 Ribonuclease E/G family V469_21185 PF02545 Maf-like protein V469_21190 PF04093 rod shape-determining protein MreD V469_21195 PF04085 rod shape-determining protein MreC V469_21225 PF07963 Prokaryotic N-terminal methylation motif V469_21225 PF14245 Type IV pilin PilA V469_21230 PF00114 Pilin (bacterial filament) V469_21230 PF07963 Prokaryotic N-terminal methylation motif V469_21245 PF00482 Type II secretion system (T2SS), protein F V469_21250 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain V469_21250 PF00437 Type II/IV secretion system protein V469_21260 PF09077 Mu B transposition protein, C terminal V469_21260 PF13401 AAA domain V469_21265 PF00263 Bacterial type II and III secretion system protein V469_21265 PF03958 Bacterial type II/III secretion system short domain V469_21295 PF17157 Gammaproteobacterial periplasmic sensor domain V469_21295 PF00990 Diguanylate cyclase, GGDEF domain V469_21295 PF00563 EAL domain V469_21300 PF12792 CSS motif domain associated with EAL V469_21300 PF00563 EAL domain V469_21305 PF01699 Sodium/calcium exchanger protein V469_21310 PF00221 Aromatic amino acid lyase V469_21315 PF17391 Urocanase N-terminal domain V469_21315 PF01175 Urocanase Rossmann-like domain V469_21315 PF17392 Urocanase C-terminal domain V469_21320 PF00491 Arginase family V469_21325 PF01979 Amidohydrolase family V469_21330 PF07702 UTRA domain V469_21330 PF00392 Bacterial regulatory proteins, gntR family V469_21335 PF00484 Carbonic anhydrase V469_21340 PF00140 Sigma-70 factor, region 1.2 V469_21340 PF04545 Sigma-70, region 4 V469_21340 PF04542 Sigma-70 region 2 V469_21345 PF18075 FtsX extracellular domain V469_21350 PF00005 ABC transporter V469_21355 PF02881 SRP54-type protein, helical bundle domain V469_21355 PF00448 SRP54-type protein, GTPase domain V469_21375 PF00440 Bacterial regulatory proteins, tetR family V469_21385 PF13091 PLD-like domain V469_21395 PF01464 Transglycosylase SLT domain V469_21410 PF02416 mttA/Hcf106 family V469_21415 PF03466 LysR substrate binding domain V469_21415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_21420 PF01914 MarC family integral membrane protein V469_21425 PF10678 Protein of unknown function (DUF2492) V469_21430 PF00375 Sodium:dicarboxylate symporter family V469_21440 PF03466 LysR substrate binding domain V469_21440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_21445 PF13533 Biotin-lipoyl like V469_21450 PF07690 Major Facilitator Superfamily V469_21455 PF07947 YhhN family V469_21480 PF00326 Prolyl oligopeptidase family V469_21480 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain V469_21495 PF00106 short chain dehydrogenase V469_21500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_21500 PF03466 LysR substrate binding domain V469_21505 PF02525 Flavodoxin-like fold V469_21510 PF02254 TrkA-N domain V469_21510 PF00999 Sodium/hydrogen exchanger family V469_21560 PF01196 Ribosomal protein L17 V469_21565 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain V469_21565 PF01000 RNA polymerase Rpb3/RpoA insert domain V469_21565 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain V469_21570 PF00163 Ribosomal protein S4/S9 N-terminal domain V469_21570 PF01479 S4 domain V469_21575 PF00411 Ribosomal protein S11 V469_21580 PF00416 Ribosomal protein S13/S18 V469_21585 PF00344 SecY translocase V469_21590 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A V469_21595 PF00327 Ribosomal protein L30p/L7e V469_21600 PF00333 Ribosomal protein S5, N-terminal domain V469_21600 PF03719 Ribosomal protein S5, C-terminal domain V469_21605 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast V469_21610 PF00347 Ribosomal protein L6 V469_21615 PF00410 Ribosomal protein S8 V469_21620 PF00253 Ribosomal protein S14p/S29e V469_21625 PF00673 ribosomal L5P family C-terminus V469_21625 PF00281 Ribosomal protein L5 V469_21630 PF00467 KOW motif V469_21630 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 V469_21635 PF00238 Ribosomal protein L14p/L23e V469_21640 PF00366 Ribosomal protein S17 V469_21645 PF00831 Ribosomal L29 protein V469_21650 PF00252 Ribosomal protein L16p/L10e V469_21655 PF07650 KH domain V469_21655 PF00189 Ribosomal protein S3, C-terminal domain V469_21660 PF00237 Ribosomal protein L22p/L17e V469_21665 PF00203 Ribosomal protein S19 V469_21670 PF00181 Ribosomal Proteins L2, RNA binding domain V469_21670 PF03947 Ribosomal Proteins L2, C-terminal domain V469_21675 PF00276 Ribosomal protein L23 V469_21680 PF00573 Ribosomal protein L4/L1 family V469_21685 PF00297 Ribosomal protein L3 V469_21690 PF00338 Ribosomal protein S10p/S20e V469_21700 PF00512 His Kinase A (phospho-acceptor) domain V469_21700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_21700 PF00672 HAMP domain V469_21705 PF00072 Response regulator receiver domain V469_21705 PF00486 Transcriptional regulatory protein, C terminal V469_21710 PF01272 Transcription elongation factor, GreA/GreB, C-term V469_21710 PF03449 Transcription elongation factor, N-terminal V469_21715 PF17674 HHH domain V469_21715 PF00575 S1 RNA binding domain V469_21715 PF16921 Tex protein YqgF-like domain V469_21715 PF09371 Tex-like protein N-terminal domain V469_21735 PF00561 alpha/beta hydrolase fold V469_21740 PF00156 Phosphoribosyl transferase domain V469_21745 PF01106 NifU-like domain V469_21745 PF01521 Iron-sulphur cluster biosynthesis V469_21750 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus V469_21750 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus V469_21755 PF02556 Preprotein translocase subunit SecB V469_21760 PF00581 Rhodanese-like domain V469_21765 PF06415 BPG-independent PGAM N-terminus (iPGM_N) V469_21765 PF01676 Metalloenzyme superfamily V469_21770 PF01551 Peptidase family M23 V469_21780 PF00356 Bacterial regulatory proteins, lacI family V469_21780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family V469_21785 PF01081 KDPG and KHG aldolase V469_21790 PF00920 Dehydratase family V469_21795 PF01202 Shikimate kinase V469_21800 PF02447 GntP family permease V469_21805 PF13091 PLD-like domain V469_21810 PF17191 RecG wedge domain V469_21810 PF00270 DEAD/DEAH box helicase V469_21810 PF00271 Helicase conserved C-terminal domain V469_21820 PF00583 Acetyltransferase (GNAT) family V469_21820 PF09500 Putative thioesterase (yiiD_Cterm) V469_21830 PF02580 D-Tyr-tRNA(Tyr) deacylase V469_21835 PF03631 Virulence factor BrkB V469_21845 PF03951 Glutamine synthetase, beta-Grasp domain V469_21845 PF00120 Glutamine synthetase, catalytic domain V469_21855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_21855 PF00512 His Kinase A (phospho-acceptor) domain V469_21855 PF00989 PAS fold V469_21860 PF00158 Sigma-54 interaction domain V469_21860 PF00072 Response regulator receiver domain V469_21860 PF02954 Bacterial regulatory protein, Fis family V469_21865 PF00962 Adenosine/AMP deaminase V469_21870 PF06969 HemN C-terminal domain V469_21870 PF04055 Radical SAM superfamily V469_21875 PF10675 Protein of unknown function (DUF2489) V469_21880 PF04220 Der GTPase activator (YihI) V469_21890 PF00034 Cytochrome c V469_21895 PF01926 50S ribosome-binding GTPase V469_21900 PF07369 Protein of unknown function (DUF1488) V469_21905 PF01488 Shikimate / quinate 5-dehydrogenase V469_21905 PF18317 Shikimate 5'-dehydrogenase C-terminal domain V469_21905 PF08501 Shikimate dehydrogenase substrate binding domain V469_21910 PF01218 Coproporphyrinogen III oxidase V469_21915 PF01300 Telomere recombination V469_21920 PF00731 AIR carboxylase V469_21925 PF01396 Topoisomerase DNA binding C4 zinc finger V469_21930 PF04361 Protein of unknown function (DUF494) V469_21935 PF17782 DprA winged helix domain V469_21935 PF02481 DNA recombination-mediator protein A V469_21945 PF01327 Polypeptide deformylase V469_21950 PF02911 Formyl transferase, C-terminal domain V469_21950 PF00551 Formyl transferase V469_21955 PF01189 16S rRNA methyltransferase RsmB/F V469_21955 PF01029 NusB family V469_21960 PF02080 TrkA-C domain V469_21960 PF02254 TrkA-N domain V469_21965 PF02386 Cation transport protein V469_21985 PF02082 Transcriptional regulator V469_21990 PF00294 pfkB family carbohydrate kinase V469_21995 PF01262 Alanine dehydrogenase/PNT, C-terminal domain V469_21995 PF05222 Alanine dehydrogenase/PNT, N-terminal domain V469_22000 PF00958 GMP synthase C terminal domain V469_22000 PF00117 Glutamine amidotransferase class-I V469_22000 PF02540 NAD synthase V469_22005 PF00171 Aldehyde dehydrogenase family V469_22010 PF00202 Aminotransferase class-III V469_22015 PF01381 Helix-turn-helix V469_22015 PF07883 Cupin domain V469_22020 PF00171 Aldehyde dehydrogenase family V469_22030 PF00892 EamA-like transporter family V469_22035 PF12833 Helix-turn-helix domain V469_22040 PF01810 LysE type translocator V469_22045 PF00689 Cation transporting ATPase, C-terminus V469_22045 PF00690 Cation transporter/ATPase, N-terminus V469_22050 PF04143 Sulphur transport V469_22055 PF01810 LysE type translocator V469_22065 PF06206 CpeT/CpcT family (DUF1001) V469_22090 PF14001 YdfZ protein V469_22100 PF03466 LysR substrate binding domain V469_22100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_22115 PF00580 UvrD/REP helicase N-terminal domain V469_22115 PF13361 UvrD-like helicase C-terminal domain V469_22145 PF03466 LysR substrate binding domain V469_22145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_22150 PF08240 Alcohol dehydrogenase GroES-like domain V469_22150 PF00107 Zinc-binding dehydrogenase V469_22155 PF00756 Putative esterase V469_22165 PF03781 Sulfatase-modifying factor enzyme 1 V469_22165 PF12867 DinB superfamily V469_22170 PF13593 SBF-like CPA transporter family (DUF4137) V469_22175 PF13520 Amino acid permease V469_22180 PF01588 Putative tRNA binding domain V469_22185 PF13520 Amino acid permease V469_22190 PF04074 YhcH/YjgK/YiaL V469_22195 PF00703 Glycosyl hydrolases family 2 V469_22195 PF02836 Glycosyl hydrolases family 2, TIM barrel domain V469_22195 PF02837 Glycosyl hydrolases family 2, sugar binding domain V469_22195 PF02929 Beta galactosidase small chain V469_22195 PF16353 Domain of unknown function(DUF4981) V469_22200 PF00356 Bacterial regulatory proteins, lacI family V469_22235 PF00132 Bacterial transferase hexapeptide (six repeats) V469_22240 PF00476 DNA polymerase family A V469_22240 PF01612 3'-5' exonuclease V469_22240 PF01367 5'-3' exonuclease, C-terminal SAM fold V469_22240 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain V469_22250 PF06005 Cell division protein ZapB V469_22260 PF06426 Serine acetyltransferase, N-terminal V469_22260 PF00132 Bacterial transferase hexapeptide (six repeats) V469_22265 PF16916 Dimerisation domain of Zinc Transporter V469_22265 PF01545 Cation efflux family V469_22270 PF00072 Response regulator receiver domain V469_22270 PF00486 Transcriptional regulatory protein, C terminal V469_22275 PF00512 His Kinase A (phospho-acceptor) domain V469_22275 PF16527 Two-component sensor protein CpxA, periplasmic domain V469_22275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_22275 PF00672 HAMP domain V469_22280 PF00588 SpoU rRNA Methylase family V469_22285 PF01554 MatE V469_22290 PF02630 SCO1/SenC V469_22300 PF01726 LexA DNA binding domain V469_22300 PF00717 Peptidase S24-like V469_22305 PF01553 Acyltransferase V469_22310 PF01040 UbiA prenyltransferase family V469_22315 PF04345 Chorismate lyase V469_22320 PF03748 Flagellar basal body-associated protein FliL V469_22340 PF08240 Alcohol dehydrogenase GroES-like domain V469_22340 PF00107 Zinc-binding dehydrogenase V469_22345 PF00356 Bacterial regulatory proteins, lacI family V469_22345 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family V469_22350 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 V469_22360 PF03611 PTS system sugar-specific permease component V469_22365 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) V469_22370 PF01075 Glycosyltransferase family 9 (heptosyltransferase) V469_22375 PF00535 Glycosyl transferase family 2 V469_22380 PF01075 Glycosyltransferase family 9 (heptosyltransferase) V469_22385 PF01467 Cytidylyltransferase-like V469_22390 PF04393 Protein of unknown function (DUF535) V469_22395 PF06827 Zinc finger found in FPG and IleRS V469_22395 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain V469_22395 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain V469_22405 PF00471 Ribosomal protein L33 V469_22410 PF00830 Ribosomal L28 family V469_22415 PF04002 RadC-like JAB domain V469_22420 PF04127 DNA / pantothenate metabolism flavoprotein V469_22420 PF02441 Flavoprotein V469_22425 PF00692 dUTPase V469_22430 PF00440 Bacterial regulatory proteins, tetR family V469_22435 PF00924 Mechanosensitive ion channel V469_22435 PF05552 Conserved TM helix V469_22445 PF00342 Phosphoglucose isomerase V469_22450 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain V469_22450 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain V469_22455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V469_22455 PF03466 LysR substrate binding domain V469_22470 PF00583 Acetyltransferase (GNAT) family V469_22470 PF13607 Succinyl-CoA ligase like flavodoxin domain V469_22470 PF13380 CoA binding domain V469_22500 PF12724 Flavodoxin domain V469_22505 PF02386 Cation transport protein V469_22510 PF01205 Uncharacterized protein family UPF0029 V469_22510 PF09186 Domain of unknown function (DUF1949) V469_22515 PF00557 Metallopeptidase family M24 V469_22520 PF13193 AMP-binding enzyme C-terminal domain V469_22520 PF00501 AMP-binding enzyme V469_22525 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain V469_22525 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain V469_22525 PF00378 Enoyl-CoA hydratase/isomerase V469_22530 PF02803 Thiolase, C-terminal domain V469_22530 PF00108 Thiolase, N-terminal domain V469_22535 PF00486 Transcriptional regulatory protein, C terminal V469_22535 PF00072 Response regulator receiver domain V469_22540 PF00672 HAMP domain V469_22540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_22540 PF00512 His Kinase A (phospho-acceptor) domain V469_22545 PF01547 Bacterial extracellular solute-binding protein V469_22555 PF01206 Sulfurtransferase TusA V469_22560 PF01042 Endoribonuclease L-PSP V469_22565 PF00691 OmpA family V469_22565 PF13488 Glycine zipper V469_22570 PF00857 Isochorismatase family V469_22575 PF03352 Methyladenine glycosylase V469_22580 PF02091 Glycyl-tRNA synthetase alpha subunit V469_22585 PF02092 Glycyl-tRNA synthetase beta subunit V469_22585 PF05746 DALR anticodon binding domain V469_22600 PF14306 PUA-like domain V469_22600 PF01747 ATP-sulfurylase V469_22620 PF03222 Tryptophan/tyrosine permease family V469_22625 PF12801 4Fe-4S binding domain V469_22635 PF18113 Rubredoxin binding C-terminal domain V469_22635 PF07992 Pyridine nucleotide-disulphide oxidoreductase V469_22640 PF00301 Rubredoxin V469_22640 PF00258 Flavodoxin V469_22640 PF00753 Metallo-beta-lactamase superfamily V469_22645 PF00158 Sigma-54 interaction domain V469_22645 PF01590 GAF domain V469_22650 PF07702 UTRA domain V469_22650 PF00392 Bacterial regulatory proteins, gntR family V469_22655 PF02378 Phosphotransferase system, EIIC V469_22655 PF00367 phosphotransferase system, EIIB V469_22660 PF02056 Family 4 glycosyl hydrolase V469_22660 PF11975 Family 4 glycosyl hydrolase C-terminal domain V469_22665 PF00356 Bacterial regulatory proteins, lacI family V469_22670 PF13458 Periplasmic binding protein V469_22675 PF02653 Branched-chain amino acid transport system / permease component V469_22680 PF02653 Branched-chain amino acid transport system / permease component V469_22680 PF11862 Domain of unknown function (DUF3382) V469_22685 PF12399 Branched-chain amino acid ATP-binding cassette transporter V469_22685 PF00005 ABC transporter V469_22690 PF00005 ABC transporter V469_22705 PF00581 Rhodanese-like domain V469_22710 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease V469_22710 PF01694 Rhomboid family V469_22715 PF12262 Bacterial virulence factor lipase N-terminal V469_22720 PF04380 Membrane fusogenic activity V469_22725 PF00175 Oxidoreductase NAD-binding domain V469_22730 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase V469_22740 PF07497 Rho termination factor, RNA-binding domain V469_22740 PF07498 Rho termination factor, N-terminal domain V469_22740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain V469_22745 PF00085 Thioredoxin V469_22750 PF00270 DEAD/DEAH box helicase V469_22750 PF00271 Helicase conserved C-terminal domain V469_22755 PF02541 Ppx/GppA phosphatase family V469_22770 PF04445 Putative SAM-dependent methyltransferase V469_22780 PF01432 Peptidase family M3 V469_22785 PF00490 Delta-aminolevulinic acid dehydratase V469_22790 PF01026 TatD related DNase V469_22795 PF00902 Sec-independent protein translocase protein (TatC) V469_22800 PF02416 mttA/Hcf106 family V469_22805 PF02416 mttA/Hcf106 family V469_22810 PF03109 ABC1 family V469_22815 PF02036 SCP-2 sterol transfer family V469_22820 PF01209 ubiE/COQ5 methyltransferase family V469_22825 PF02537 CrcB-like protein, Camphor Resistance (CrcB) V469_22830 PF07969 Amidohydrolase family V469_22875 PF03544 Gram-negative bacterial TonB protein C-terminal V469_22880 PF02472 Biopolymer transport protein ExbD/TolR V469_22885 PF01618 MotA/TolQ/ExbB proton channel family V469_22890 PF01618 MotA/TolQ/ExbB proton channel family V469_22900 PF00196 Bacterial regulatory proteins, luxR family V469_22900 PF03472 Autoinducer binding domain V469_22905 PF01380 SIS domain V469_22910 PF00455 DeoR C terminal sensor domain V469_22910 PF08220 DeoR-like helix-turn-helix domain V469_22915 PF00486 Transcriptional regulatory protein, C terminal V469_22915 PF00072 Response regulator receiver domain V469_22920 PF00512 His Kinase A (phospho-acceptor) domain V469_22920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V469_22920 PF00672 HAMP domain V469_22925 PF00905 Penicillin binding protein transpeptidase domain V469_22930 PF06123 Inner membrane protein CreD V469_22935 PF00132 Bacterial transferase hexapeptide (six repeats) V469_22935 PF14602 Hexapeptide repeat of succinyl-transferase V469_22935 PF12804 MobA-like NTP transferase domain V469_22940 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain V469_22940 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain V469_22945 PF02874 ATP synthase alpha/beta family, beta-barrel domain V469_22945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain V469_22950 PF00231 ATP synthase V469_22955 PF02874 ATP synthase alpha/beta family, beta-barrel domain V469_22955 PF00306 ATP synthase alpha/beta chain, C terminal domain V469_22955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain V469_22960 PF00213 ATP synthase delta (OSCP) subunit V469_22965 PF00430 ATP synthase B/B' CF(0) V469_22970 PF00137 ATP synthase subunit C V469_22975 PF00119 ATP synthase A chain V469_22985 PF02195 ParB-like nuclease domain V469_22985 PF17762 HTH domain found in ParB protein V469_22990 PF13614 AAA domain V469_22995 PF02527 rRNA small subunit methyltransferase G V469_23000 PF13932 GidA associated domain V469_23000 PF01134 Glucose inhibited division protein A V469_23005 PF00258 Flavodoxin V469_23010 PF07715 TonB-dependent Receptor Plug Domain V469_23010 PF00593 TonB dependent receptor V469_23015 PF00005 ABC transporter V469_23020 PF00005 ABC transporter V469_23030 PF01032 FecCD transport family V469_23035 PF01926 50S ribosome-binding GTPase V469_23035 PF10396 GTP-binding protein TrmE N-terminus V469_23035 PF12631 MnmE helical domain V469_23040 PF14849 YidC periplasmic domain V469_23040 PF02096 60Kd inner membrane protein V469_23045 PF00825 Ribonuclease P V469_23050 PF00468 Ribosomal protein L34 V469_23060 PF00528 Binding-protein-dependent transport system inner membrane component V469_23065 PF00497 Bacterial extracellular solute-binding proteins, family 3