locus-tag class description AS145_00005 PF00308 Bacterial dnaA protein AS145_00005 PF08299 Bacterial dnaA protein helix-turn-helix AS145_00005 PF11638 DnaA N-terminal domain AS145_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AS145_00010 PF02767 DNA polymerase III beta subunit, central domain AS145_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AS145_00015 PF02463 RecF/RecN/SMC N terminal domain AS145_00020 PF01751 Toprim domain AS145_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_00020 PF18053 DNA gyrase B subunit insert domain AS145_00020 PF00986 DNA gyrase B subunit, carboxyl terminus AS145_00020 PF00204 DNA gyrase B AS145_00030 PF08279 HTH domain AS145_00030 PF13280 WYL domain AS145_00035 PF00011 Hsp20/alpha crystallin family AS145_00040 PF00011 Hsp20/alpha crystallin family AS145_00045 PF00155 Aminotransferase class I and II AS145_00060 PF07690 Major Facilitator Superfamily AS145_00065 PF00486 Transcriptional regulatory protein, C terminal AS145_00065 PF00072 Response regulator receiver domain AS145_00070 PF13492 GAF domain AS145_00070 PF00512 His Kinase A (phospho-acceptor) domain AS145_00070 PF13493 Domain of unknown function (DUF4118) AS145_00070 PF02702 Osmosensitive K+ channel His kinase sensor domain AS145_00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_00075 PF02669 K+-transporting ATPase, c chain AS145_00085 PF03814 Potassium-transporting ATPase A subunit AS145_00090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS145_00090 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS145_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_00095 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS145_00095 PF00512 His Kinase A (phospho-acceptor) domain AS145_00100 PF00873 AcrB/AcrD/AcrF family AS145_00105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS145_00110 PF00440 Bacterial regulatory proteins, tetR family AS145_00140 PF02887 Pyruvate kinase, alpha/beta domain AS145_00140 PF00224 Pyruvate kinase, barrel domain AS145_00145 PF07690 Major Facilitator Superfamily AS145_00155 PF00672 HAMP domain AS145_00155 PF00512 His Kinase A (phospho-acceptor) domain AS145_00155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_00160 PF02954 Bacterial regulatory protein, Fis family AS145_00160 PF00072 Response regulator receiver domain AS145_00160 PF14532 Sigma-54 interaction domain AS145_00175 PF12146 Serine aminopeptidase, S33 AS145_00180 PF00132 Bacterial transferase hexapeptide (six repeats) AS145_00185 PF00588 SpoU rRNA Methylase family AS145_00185 PF12105 SpoU, rRNA methylase, C-terminal AS145_00190 PF02824 TGS domain AS145_00190 PF04607 Region found in RelA / SpoT proteins AS145_00190 PF13291 ACT domain AS145_00195 PF01192 RNA polymerase Rpb6 AS145_00200 PF00625 Guanylate kinase AS145_00205 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AS145_00220 PF00892 EamA-like transporter family AS145_00235 PF03466 LysR substrate binding domain AS145_00235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_00240 PF00579 tRNA synthetases class I (W and Y) AS145_00245 PF00582 Universal stress protein family AS145_00250 PF07055 Enoyl reductase FAD binding domain AS145_00250 PF12241 Trans-2-enoyl-CoA reductase catalytic region AS145_00250 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AS145_00255 PF00990 Diguanylate cyclase, GGDEF domain AS145_00260 PF00210 Ferritin-like domain AS145_00270 PF07690 Major Facilitator Superfamily AS145_00275 PF01810 LysE type translocator AS145_00290 PF16967 E-set like domain AS145_00290 PF15976 CS1-pili formation C-terminal AS145_00295 PF18649 EcpB C-terminal domain AS145_00300 PF16449 Fimbrillin MatB AS145_00305 PF00072 Response regulator receiver domain AS145_00305 PF00196 Bacterial regulatory proteins, luxR family AS145_00310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_00310 PF00512 His Kinase A (phospho-acceptor) domain AS145_00310 PF01627 Hpt domain AS145_00310 PF00989 PAS fold AS145_00310 PF00072 Response regulator receiver domain AS145_00310 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS145_00320 PF06580 Histidine kinase AS145_00320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_00320 PF07694 5TMR of 5TMR-LYT AS145_00325 PF00072 Response regulator receiver domain AS145_00325 PF04397 LytTr DNA-binding domain AS145_00330 PF07690 Major Facilitator Superfamily AS145_00335 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AS145_00335 PF02222 ATP-grasp domain AS145_00340 PF00731 AIR carboxylase AS145_00355 PF03466 LysR substrate binding domain AS145_00355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_00360 PF00593 TonB dependent receptor AS145_00360 PF07715 TonB-dependent Receptor Plug Domain AS145_00365 PF01177 Asp/Glu/Hydantoin racemase AS145_00420 PF01695 IstB-like ATP binding protein AS145_00425 PF00665 Integrase core domain AS145_00425 PF02796 Helix-turn-helix domain of resolvase AS145_00470 PF04002 RadC-like JAB domain AS145_00515 PF05930 Prophage CP4-57 regulatory protein (AlpA) AS145_00520 PF00816 H-NS histone family AS145_00535 PF03472 Autoinducer binding domain AS145_00535 PF00196 Bacterial regulatory proteins, luxR family AS145_00540 PF05638 Type VI secretion system effector, Hcp AS145_00545 PF04717 Type VI secretion system, phage-baseplate injector AS145_00585 PF15608 PELOTA RNA binding domain AS145_00585 PF11202 Phosphoribosyl transferase (PRTase) AS145_00605 PF02342 TerD domain AS145_00610 PF02342 TerD domain AS145_00615 PF05099 Tellurite resistance protein TerB AS145_00620 PF03741 Integral membrane protein TerC family AS145_00625 PF02342 TerD domain AS145_00630 PF02342 TerD domain AS145_00640 PF02342 TerD domain AS145_00645 PF13356 Arm DNA-binding domain AS145_00645 PF00589 Phage integrase family AS145_00650 PF00899 ThiF family AS145_00655 PF02657 Fe-S metabolism associated domain AS145_00660 PF00266 Aminotransferase class-V AS145_00665 PF13361 UvrD-like helicase C-terminal domain AS145_00665 PF00580 UvrD/REP helicase N-terminal domain AS145_00670 PF00990 Diguanylate cyclase, GGDEF domain AS145_00670 PF00563 EAL domain AS145_00670 PF03707 Bacterial signalling protein N terminal repeat AS145_00675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AS145_00680 PF00107 Zinc-binding dehydrogenase AS145_00680 PF08240 Alcohol dehydrogenase GroES-like domain AS145_00685 PF00155 Aminotransferase class I and II AS145_00690 PF00440 Bacterial regulatory proteins, tetR family AS145_00690 PF08360 QacR-like protein, C-terminal region AS145_00695 PF01370 NAD dependent epimerase/dehydratase family AS145_00710 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) AS145_00730 PF08340 Domain of unknown function (DUF1732) AS145_00730 PF03755 YicC-like family, N-terminal region AS145_00735 PF03725 3' exoribonuclease family, domain 2 AS145_00735 PF01138 3' exoribonuclease family, domain 1 AS145_00740 PF00156 Phosphoribosyl transferase domain AS145_00745 PF00403 Heavy-metal-associated domain AS145_00750 PF00376 MerR family regulatory protein AS145_00750 PF09278 MerR, DNA binding AS145_00755 PF00563 EAL domain AS145_00755 PF00360 Phytochrome region AS145_00755 PF01590 GAF domain AS145_00755 PF00990 Diguanylate cyclase, GGDEF domain AS145_00760 PF06288 Protein of unknown function (DUF1040) AS145_00765 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AS145_00765 PF12801 4Fe-4S binding domain AS145_00765 PF13746 4Fe-4S dicluster domain AS145_00770 PF01636 Phosphotransferase enzyme family AS145_00775 PF01323 DSBA-like thioredoxin domain AS145_00780 PF00528 Binding-protein-dependent transport system inner membrane component AS145_00785 PF00005 ABC transporter AS145_00795 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AS145_00795 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AS145_00800 PF00857 Isochorismatase family AS145_00810 PF04463 Protein of unknown function (DUF523) AS145_00815 PF01553 Acyltransferase AS145_00820 PF01553 Acyltransferase AS145_00825 PF13335 Magnesium chelatase, subunit ChlI C-terminal AS145_00825 PF01078 Magnesium chelatase, subunit ChlI AS145_00830 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS145_00830 PF00205 Thiamine pyrophosphate enzyme, central domain AS145_00830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS145_00840 PF01063 Amino-transferase class IV AS145_00845 PF00920 Dehydratase family AS145_00850 PF00291 Pyridoxal-phosphate dependent enzyme AS145_00850 PF00585 C-terminal regulatory domain of Threonine dehydratase AS145_00855 PF01389 OmpA-like transmembrane domain AS145_00855 PF00691 OmpA family AS145_00865 PF00270 DEAD/DEAH box helicase AS145_00865 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AS145_00865 PF18074 Primosomal protein N C-terminal domain AS145_00865 PF00271 Helicase conserved C-terminal domain AS145_00865 PF17764 3′ DNA-binding domain (3′BD) AS145_00870 PF01197 Ribosomal protein L31 AS145_00875 PF11066 Protein of unknown function (DUF2867) AS145_00875 PF13460 NAD(P)H-binding AS145_00880 PF00390 Malic enzyme, N-terminal domain AS145_00880 PF03949 Malic enzyme, NAD binding domain AS145_00890 PF00672 HAMP domain AS145_00890 PF00512 His Kinase A (phospho-acceptor) domain AS145_00890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_00895 PF00072 Response regulator receiver domain AS145_00895 PF00486 Transcriptional regulatory protein, C terminal AS145_00900 PF05958 tRNA (Uracil-5-)-methyltransferase AS145_00915 PF02903 Alpha amylase, N-terminal ig-like domain AS145_00915 PF00128 Alpha amylase, catalytic domain AS145_00930 PF00012 Hsp70 protein AS145_00935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS145_00935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS145_00940 PF05981 CreA protein AS145_00955 PF01258 Prokaryotic dksA/traR C4-type zinc finger AS145_00960 PF00120 Glutamine synthetase, catalytic domain AS145_00965 PF00202 Aminotransferase class-III AS145_00970 PF13416 Bacterial extracellular solute-binding protein AS145_00975 PF13416 Bacterial extracellular solute-binding protein AS145_00980 PF08402 TOBE domain AS145_00980 PF00005 ABC transporter AS145_00985 PF00528 Binding-protein-dependent transport system inner membrane component AS145_00990 PF00528 Binding-protein-dependent transport system inner membrane component AS145_00995 PF03473 MOSC domain AS145_00995 PF03475 3-alpha domain AS145_01010 PF03061 Thioesterase superfamily AS145_01015 PF00270 DEAD/DEAH box helicase AS145_01015 PF16124 RecQ zinc-binding AS145_01015 PF09382 RQC domain AS145_01015 PF00570 HRDC domain AS145_01015 PF00271 Helicase conserved C-terminal domain AS145_01020 PF00034 Cytochrome c AS145_01025 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AS145_01035 PF02592 Putative vitamin uptake transporter AS145_01040 PF03737 Aldolase/RraA AS145_01045 PF00672 HAMP domain AS145_01045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_01050 PF03448 MgtE intracellular N domain AS145_01050 PF00571 CBS domain AS145_01050 PF01769 Divalent cation transporter AS145_01055 PF10414 Sirohaem synthase dimerisation region AS145_01055 PF14824 Sirohaem biosynthesis protein central AS145_01055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS145_01060 PF01226 Formate/nitrite transporter AS145_01065 PF13806 Rieske-like [2Fe-2S] domain AS145_01070 PF04324 BFD-like [2Fe-2S] binding domain AS145_01070 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS145_01070 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS145_01070 PF18267 Rubredoxin NAD+ reductase C-terminal domain AS145_01070 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS145_01075 PF03466 LysR substrate binding domain AS145_01075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_01080 PF07690 Major Facilitator Superfamily AS145_01085 PF07724 AAA domain (Cdc48 subfamily) AS145_01085 PF00004 ATPase family associated with various cellular activities (AAA) AS145_01085 PF10431 C-terminal, D2-small domain, of ClpB protein AS145_01090 PF00227 Proteasome subunit AS145_01100 PF00750 tRNA synthetases class I (R) AS145_01100 PF05746 DALR anticodon binding domain AS145_01100 PF03485 Arginyl tRNA synthetase N terminal domain AS145_01110 PF04545 Sigma-70, region 4 AS145_01110 PF04542 Sigma-70 region 2 AS145_01115 PF12973 ChrR Cupin-like domain AS145_01120 PF02673 Bacitracin resistance protein BacA AS145_01125 PF00248 Aldo/keto reductase family AS145_01130 PF01263 Aldose 1-epimerase AS145_01135 PF10509 Galactokinase galactose-binding signature AS145_01135 PF00288 GHMP kinases N terminal domain AS145_01135 PF08544 GHMP kinases C terminal AS145_01140 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AS145_01140 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AS145_01145 PF16363 GDP-mannose 4,6 dehydratase AS145_01150 PF00356 Bacterial regulatory proteins, lacI family AS145_01155 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AS145_01155 PF16353 Domain of unknown function(DUF4981) AS145_01155 PF02837 Glycosyl hydrolases family 2, sugar binding domain AS145_01155 PF00703 Glycosyl hydrolases family 2 AS145_01155 PF02929 Beta galactosidase small chain AS145_01160 PF13407 Periplasmic binding protein domain AS145_01165 PF00005 ABC transporter AS145_01170 PF02653 Branched-chain amino acid transport system / permease component AS145_01175 PF00672 HAMP domain AS145_01175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_01175 PF02743 Cache domain AS145_01195 PF00696 Amino acid kinase family AS145_01200 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AS145_01200 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AS145_01205 PF03606 C4-dicarboxylate anaerobic carrier AS145_01210 PF02863 Arginine repressor, C-terminal domain AS145_01210 PF01316 Arginine repressor, DNA binding domain AS145_01215 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AS145_01215 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AS145_01220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AS145_01220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AS145_01235 PF02666 Phosphatidylserine decarboxylase AS145_01240 PF00672 HAMP domain AS145_01240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_01240 PF02743 Cache domain AS145_01245 PF08212 Lipocalin-like domain AS145_01250 PF06719 AraC-type transcriptional regulator N-terminus AS145_01250 PF12833 Helix-turn-helix domain AS145_01255 PF00465 Iron-containing alcohol dehydrogenase AS145_01260 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AS145_01260 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AS145_01260 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AS145_01265 PF02233 NAD(P) transhydrogenase beta subunit AS145_01275 PF13309 HTH domain AS145_01275 PF08348 YheO-like PAS domain AS145_01280 PF03313 Serine dehydratase alpha chain AS145_01285 PF00375 Sodium:dicarboxylate symporter family AS145_01290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS145_01290 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS145_01295 PF13525 Outer membrane lipoprotein AS145_01300 PF01479 S4 domain AS145_01300 PF00849 RNA pseudouridylate synthase AS145_01310 PF10431 C-terminal, D2-small domain, of ClpB protein AS145_01310 PF02861 Clp amino terminal domain, pathogenicity island component AS145_01310 PF00004 ATPase family associated with various cellular activities (AAA) AS145_01310 PF17871 AAA lid domain AS145_01310 PF07724 AAA domain (Cdc48 subfamily) AS145_01320 PF03590 Aspartate-ammonia ligase AS145_01325 PF01037 Lrp/AsnC ligand binding domain AS145_01335 PF10063 Uncharacterized integral membrane protein (DUF2301) AS145_01340 PF00571 CBS domain AS145_01340 PF00478 IMP dehydrogenase / GMP reductase domain AS145_01355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_01355 PF00512 His Kinase A (phospho-acceptor) domain AS145_01365 PF00158 Sigma-54 interaction domain AS145_01365 PF00072 Response regulator receiver domain AS145_01370 PF06496 Protein of unknown function (DUF1097) AS145_01375 PF00174 Oxidoreductase molybdopterin binding domain AS145_01380 PF01794 Ferric reductase like transmembrane component AS145_01395 PF00072 Response regulator receiver domain AS145_01395 PF00486 Transcriptional regulatory protein, C terminal AS145_01400 PF08918 PhoQ Sensor AS145_01400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_01410 PF00384 Molybdopterin oxidoreductase AS145_01410 PF01568 Molydopterin dinucleotide binding domain AS145_01410 PF18364 Molybdopterin oxidoreductase N-terminal domain AS145_01415 PF03264 NapC/NirT cytochrome c family, N-terminal region AS145_01420 PF01131 DNA topoisomerase AS145_01420 PF01751 Toprim domain AS145_01435 PF12833 Helix-turn-helix domain AS145_01435 PF12852 Cupin AS145_01440 PF02386 Cation transport protein AS145_01445 PF02080 TrkA-C domain AS145_01445 PF02254 TrkA-N domain AS145_01450 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AS145_01450 PF01565 FAD binding domain AS145_01455 PF08279 HTH domain AS145_01455 PF02237 Biotin protein ligase C terminal domain AS145_01455 PF03099 Biotin/lipoate A/B protein ligase family AS145_01460 PF00485 Phosphoribulokinase / Uridine kinase family AS145_01475 PF00009 Elongation factor Tu GTP binding domain AS145_01475 PF03144 Elongation factor Tu domain 2 AS145_01475 PF03143 Elongation factor Tu C-terminal domain AS145_01485 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AS145_01490 PF02357 Transcription termination factor nusG AS145_01490 PF00467 KOW motif AS145_01495 PF00298 Ribosomal protein L11, RNA binding domain AS145_01495 PF03946 Ribosomal protein L11, N-terminal domain AS145_01500 PF00687 Ribosomal protein L1p/L10e family AS145_01505 PF00466 Ribosomal protein L10 AS145_01510 PF16320 Ribosomal protein L7/L12 dimerisation domain AS145_01510 PF00542 Ribosomal protein L7/L12 C-terminal domain AS145_01515 PF00562 RNA polymerase Rpb2, domain 6 AS145_01515 PF04561 RNA polymerase Rpb2, domain 2 AS145_01515 PF10385 RNA polymerase beta subunit external 1 domain AS145_01515 PF04563 RNA polymerase beta subunit AS145_01515 PF04565 RNA polymerase Rpb2, domain 3 AS145_01515 PF04560 RNA polymerase Rpb2, domain 7 AS145_01520 PF04998 RNA polymerase Rpb1, domain 5 AS145_01520 PF05000 RNA polymerase Rpb1, domain 4 AS145_01520 PF00623 RNA polymerase Rpb1, domain 2 AS145_01520 PF04997 RNA polymerase Rpb1, domain 1 AS145_01520 PF04983 RNA polymerase Rpb1, domain 3 AS145_01530 PF08348 YheO-like PAS domain AS145_01530 PF13309 HTH domain AS145_01535 PF01042 Endoribonuclease L-PSP AS145_01540 PF02635 DsrE/DsrF-like family AS145_01545 PF02635 DsrE/DsrF-like family AS145_01550 PF04077 DsrH like protein AS145_01560 PF00177 Ribosomal protein S7p/S5e AS145_01565 PF03764 Elongation factor G, domain IV AS145_01565 PF00009 Elongation factor Tu GTP binding domain AS145_01565 PF03144 Elongation factor Tu domain 2 AS145_01565 PF14492 Elongation Factor G, domain II AS145_01565 PF00679 Elongation factor G C-terminus AS145_01570 PF00009 Elongation factor Tu GTP binding domain AS145_01570 PF03143 Elongation factor Tu C-terminal domain AS145_01570 PF03144 Elongation factor Tu domain 2 AS145_01615 PF00860 Permease family AS145_01620 PF02733 Dak1 domain AS145_01625 PF02734 DAK2 domain AS145_01630 PF05524 PEP-utilising enzyme, N-terminal AS145_01630 PF03610 PTS system fructose IIA component AS145_01630 PF00391 PEP-utilising enzyme, mobile domain AS145_01630 PF00381 PTS HPr component phosphorylation site AS145_01635 PF00465 Iron-containing alcohol dehydrogenase AS145_01640 PF02954 Bacterial regulatory protein, Fis family AS145_01640 PF00158 Sigma-54 interaction domain AS145_01640 PF00989 PAS fold AS145_01645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_01645 PF03466 LysR substrate binding domain AS145_01650 PF04371 Porphyromonas-type peptidyl-arginine deiminase AS145_01655 PF00106 short chain dehydrogenase AS145_01660 PF01594 AI-2E family transporter AS145_01665 PF00293 NUDIX domain AS145_01690 PF00199 Catalase AS145_01690 PF06628 Catalase-related immune-responsive AS145_01695 PF00583 Acetyltransferase (GNAT) family AS145_01715 PF17158 Membrane-associated sensor, integral membrane domain AS145_01715 PF00990 Diguanylate cyclase, GGDEF domain AS145_01725 PF08402 TOBE domain AS145_01725 PF00005 ABC transporter AS145_01735 PF00528 Binding-protein-dependent transport system inner membrane component AS145_01750 PF07702 UTRA domain AS145_01750 PF00392 Bacterial regulatory proteins, gntR family AS145_01760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_01760 PF03466 LysR substrate binding domain AS145_01770 PF02678 Pirin AS145_01770 PF17954 Quercetinase C-terminal cupin domain AS145_01775 PF07681 DoxX AS145_01780 PF17946 RecC C-terminal domain AS145_01785 PF12705 PD-(D/E)XK nuclease superfamily AS145_01785 PF13361 UvrD-like helicase C-terminal domain AS145_01785 PF00580 UvrD/REP helicase N-terminal domain AS145_01790 PF13538 UvrD-like helicase C-terminal domain AS145_01800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS145_01810 PF17151 Periplasmic sensor domain AS145_01810 PF00990 Diguanylate cyclase, GGDEF domain AS145_01835 PF00486 Transcriptional regulatory protein, C terminal AS145_01835 PF00072 Response regulator receiver domain AS145_01840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_01840 PF00672 HAMP domain AS145_01840 PF00512 His Kinase A (phospho-acceptor) domain AS145_01845 PF00563 EAL domain AS145_01845 PF01590 GAF domain AS145_01845 PF00990 Diguanylate cyclase, GGDEF domain AS145_01845 PF00360 Phytochrome region AS145_01850 PF00593 TonB dependent receptor AS145_01850 PF07715 TonB-dependent Receptor Plug Domain AS145_01855 PF00313 'Cold-shock' DNA-binding domain AS145_01865 PF16916 Dimerisation domain of Zinc Transporter AS145_01865 PF01545 Cation efflux family AS145_01875 PF00436 Single-strand binding protein family AS145_01880 PF00196 Bacterial regulatory proteins, luxR family AS145_01885 PF17760 UvrA interaction domain AS145_01885 PF17755 UvrA DNA-binding domain AS145_01885 PF00005 ABC transporter AS145_01895 PF03922 OmpW family AS145_01900 PF00672 HAMP domain AS145_01900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_01915 PF02219 Methylenetetrahydrofolate reductase AS145_01925 PF03594 Benzoate membrane transport protein AS145_01930 PF07883 Cupin domain AS145_01930 PF01381 Helix-turn-helix AS145_01960 PF04363 Protein of unknown function (DUF496) AS145_01970 PF04751 Protein of unknown function (DUF615) AS145_01975 PF01523 Putative modulator of DNA gyrase AS145_01980 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AS145_01985 PF01722 BolA-like protein AS145_01995 PF05494 MlaC protein AS145_02000 PF02470 MlaD protein AS145_02005 PF02405 Permease MlaE AS145_02010 PF00005 ABC transporter AS145_02015 PF00571 CBS domain AS145_02015 PF01380 SIS domain AS145_02025 PF06835 Lipopolysaccharide-assembly, LptC-related AS145_02030 PF03968 OstA-like protein AS145_02035 PF00005 ABC transporter AS145_02035 PF12399 Branched-chain amino acid ATP-binding cassette transporter AS145_02040 PF04552 Sigma-54, DNA binding domain AS145_02040 PF04963 Sigma-54 factor, core binding domain AS145_02040 PF00309 Sigma-54 factor, Activator interacting domain (AID) AS145_02045 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AS145_02050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS145_02055 PF03668 P-loop ATPase protein family AS145_02060 PF00381 PTS HPr component phosphorylation site AS145_02065 PF08279 HTH domain AS145_02065 PF05043 Mga helix-turn-helix domain AS145_02065 PF00874 PRD domain AS145_02065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS145_02070 PF07071 KDGP aldolase AS145_02075 PF03841 L-seryl-tRNA selenium transferase AS145_02080 PF01979 Amidohydrolase family AS145_02110 PF13180 PDZ domain AS145_02115 PF13180 PDZ domain AS145_02115 PF00595 PDZ domain AS145_02125 PF03969 AFG1-like ATPase AS145_02130 PF00572 Ribosomal protein L13 AS145_02135 PF00380 Ribosomal protein S9/S16 AS145_02140 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AS145_02140 PF00355 Rieske [2Fe-2S] domain AS145_02145 PF00033 Cytochrome b/b6/petB AS145_02145 PF00032 Cytochrome b(C-terminal)/b6/petD AS145_02150 PF02167 Cytochrome C1 family AS145_02155 PF02798 Glutathione S-transferase, N-terminal domain AS145_02155 PF00043 Glutathione S-transferase, C-terminal domain AS145_02160 PF04386 Stringent starvation protein B AS145_02165 PF04972 BON domain AS145_02170 PF13580 SIS domain AS145_02175 PF02021 Uncharacterised protein family UPF0102 AS145_02180 PF04348 LppC putative lipoprotein AS145_02185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS145_02190 PF02381 MraZ protein, putative antitoxin-like AS145_02195 PF01795 MraW methylase family AS145_02200 PF04999 Cell division protein FtsL AS145_02205 PF00905 Penicillin binding protein transpeptidase domain AS145_02205 PF03717 Penicillin-binding Protein dimerisation domain AS145_02210 PF08245 Mur ligase middle domain AS145_02210 PF02875 Mur ligase family, glutamate ligase domain AS145_02210 PF01225 Mur ligase family, catalytic domain AS145_02215 PF08245 Mur ligase middle domain AS145_02215 PF02875 Mur ligase family, glutamate ligase domain AS145_02215 PF01225 Mur ligase family, catalytic domain AS145_02220 PF00953 Glycosyl transferase family 4 AS145_02220 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AS145_02225 PF08245 Mur ligase middle domain AS145_02225 PF02875 Mur ligase family, glutamate ligase domain AS145_02230 PF01098 Cell cycle protein AS145_02235 PF04101 Glycosyltransferase family 28 C-terminal domain AS145_02235 PF03033 Glycosyltransferase family 28 N-terminal domain AS145_02240 PF01225 Mur ligase family, catalytic domain AS145_02240 PF08245 Mur ligase middle domain AS145_02240 PF02875 Mur ligase family, glutamate ligase domain AS145_02245 PF03799 Cell division protein FtsQ AS145_02245 PF08478 POTRA domain, FtsQ-type AS145_02250 PF02491 SHS2 domain inserted in FTSA AS145_02255 PF00091 Tubulin/FtsZ family, GTPase domain AS145_02255 PF12327 FtsZ family, C-terminal domain AS145_02260 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AS145_02270 PF07516 SecA Wing and Scaffold domain AS145_02270 PF01043 SecA preprotein cross-linking domain AS145_02270 PF07517 SecA DEAD-like domain AS145_02270 PF02810 SEC-C motif AS145_02280 PF00293 NUDIX domain AS145_02285 PF03884 DNA gyrase inhibitor YacG AS145_02290 PF07072 Cell division protein AS145_02295 PF01121 Dephospho-CoA kinase AS145_02300 PF01478 Type IV leader peptidase family AS145_02300 PF06750 Bacterial Peptidase A24 N-terminal domain AS145_02305 PF00482 Type II secretion system (T2SS), protein F AS145_02310 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AS145_02310 PF00437 Type II/IV secretion system protein AS145_02320 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AS145_02320 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AS145_02335 PF00392 Bacterial regulatory proteins, gntR family AS145_02335 PF07729 FCD domain AS145_02340 PF00456 Transketolase, thiamine diphosphate binding domain AS145_02340 PF17831 Pyruvate dehydrogenase E1 component middle domain AS145_02345 PF02817 e3 binding domain AS145_02345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS145_02345 PF00364 Biotin-requiring enzyme AS145_02350 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS145_02350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS145_02355 PF00563 EAL domain AS145_02355 PF00990 Diguanylate cyclase, GGDEF domain AS145_02355 PF08448 PAS fold AS145_02355 PF13426 PAS domain AS145_02355 PF08447 PAS fold AS145_02355 PF05231 MASE1 AS145_02365 PF12729 Four helix bundle sensory module for signal transduction AS145_02365 PF00672 HAMP domain AS145_02365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_02370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_02370 PF12729 Four helix bundle sensory module for signal transduction AS145_02370 PF00672 HAMP domain AS145_02375 PF01734 Patatin-like phospholipase AS145_02380 PF06434 Aconitate hydratase 2 N-terminus AS145_02380 PF00330 Aconitase family (aconitate hydratase) AS145_02380 PF11791 Aconitate B N-terminal domain AS145_02390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_02390 PF03466 LysR substrate binding domain AS145_02395 PF01810 LysE type translocator AS145_02405 PF02492 CobW/HypB/UreG, nucleotide-binding domain AS145_02405 PF07683 Cobalamin synthesis protein cobW C-terminal domain AS145_02410 PF07690 Major Facilitator Superfamily AS145_02420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AS145_02425 PF02152 Dihydroneopterin aldolase AS145_02430 PF02660 Glycerol-3-phosphate acyltransferase AS145_02475 PF00072 Response regulator receiver domain AS145_02475 PF01584 CheW-like domain AS145_02480 PF00106 short chain dehydrogenase AS145_02485 PF17176 tRNA-binding domain AS145_02485 PF08351 Domain of unknown function (DUF1726) AS145_02485 PF13718 GNAT acetyltransferase 2 AS145_02485 PF05127 Helicase AS145_02500 PF00210 Ferritin-like domain AS145_02510 PF02142 MGS-like domain AS145_02525 PF17763 Glutaminase/Asparaginase C-terminal domain AS145_02525 PF00710 Asparaginase, N-terminal AS145_02540 PF00356 Bacterial regulatory proteins, lacI family AS145_02545 PF00367 phosphotransferase system, EIIB AS145_02545 PF02378 Phosphotransferase system, EIIC AS145_02550 PF00128 Alpha amylase, catalytic domain AS145_02550 PF11941 Domain of unknown function (DUF3459) AS145_02555 PF14602 Hexapeptide repeat of succinyl-transferase AS145_02555 PF12464 Maltose acetyltransferase AS145_02560 PF01037 Lrp/AsnC ligand binding domain AS145_02565 PF00892 EamA-like transporter family AS145_02575 PF00171 Aldehyde dehydrogenase family AS145_02580 PF00528 Binding-protein-dependent transport system inner membrane component AS145_02585 PF00528 Binding-protein-dependent transport system inner membrane component AS145_02590 PF08402 TOBE domain AS145_02590 PF00005 ABC transporter AS145_02595 PF13416 Bacterial extracellular solute-binding protein AS145_02600 PF03466 LysR substrate binding domain AS145_02600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_02605 PF03553 Na+/H+ antiporter family AS145_02650 PF00534 Glycosyl transferases group 1 AS145_02650 PF08323 Starch synthase catalytic domain AS145_02655 PF00483 Nucleotidyl transferase AS145_02660 PF05175 Methyltransferase small domain AS145_02660 PF08468 Methyltransferase small domain N-terminal AS145_02665 PF00701 Dihydrodipicolinate synthetase family AS145_02670 PF00990 Diguanylate cyclase, GGDEF domain AS145_02670 PF01590 GAF domain AS145_02670 PF00360 Phytochrome region AS145_02670 PF00563 EAL domain AS145_02680 PF13419 Haloacid dehalogenase-like hydrolase AS145_02685 PF17209 Hfq protein AS145_02690 PF04403 Paraquat-inducible protein A AS145_02695 PF02470 MlaD protein AS145_02700 PF03886 ABC-type transport auxiliary lipoprotein component AS145_02705 PF01389 OmpA-like transmembrane domain AS145_02705 PF00691 OmpA family AS145_02715 PF00657 GDSL-like Lipase/Acylhydrolase AS145_02720 PF04076 Bacterial OB fold (BOF) protein AS145_02725 PF01464 Transglycosylase SLT domain AS145_02725 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AS145_02730 PF04362 Bacterial Fe(2+) trafficking AS145_02735 PF00633 Helix-hairpin-helix motif AS145_02735 PF00730 HhH-GPD superfamily base excision DNA repair protein AS145_02735 PF14815 NUDIX domain AS145_02735 PF10576 Iron-sulfur binding domain of endonuclease III AS145_02740 PF16537 Type II secretion system protein B AS145_02745 PF13401 AAA domain AS145_02745 PF01471 Putative peptidoglycan binding domain AS145_02755 PF01743 Poly A polymerase head domain AS145_02755 PF12627 Probable RNA and SrmB- binding site of polymerase A AS145_02755 PF01966 HD domain AS145_02770 PF04172 LrgB-like family AS145_02775 PF03788 LrgA family AS145_02780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_02780 PF03466 LysR substrate binding domain AS145_02785 PF00155 Aminotransferase class I and II AS145_02785 PF00392 Bacterial regulatory proteins, gntR family AS145_02805 PF04073 Aminoacyl-tRNA editing domain AS145_02810 PF01384 Phosphate transporter family AS145_02815 PF01865 Protein of unknown function DUF47 AS145_02830 PF03279 Bacterial lipid A biosynthesis acyltransferase AS145_02835 PF01467 Cytidylyltransferase-like AS145_02835 PF00294 pfkB family carbohydrate kinase AS145_02840 PF02321 Outer membrane efflux protein AS145_02845 PF00293 NUDIX domain AS145_02850 PF06853 Protein of unknown function (DUF1249) AS145_02855 PF00149 Calcineurin-like phosphoesterase AS145_02860 PF05728 Uncharacterised protein family (UPF0227) AS145_02865 PF00293 NUDIX domain AS145_02875 PF07869 Protein of unknown function (DUF1656) AS145_02880 PF00529 HlyD membrane-fusion protein of T1SS AS145_02880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS145_02885 PF04632 Fusaric acid resistance protein family AS145_02890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_02890 PF00986 DNA gyrase B subunit, carboxyl terminus AS145_02890 PF01751 Toprim domain AS145_02890 PF00204 DNA gyrase B AS145_02895 PF03989 DNA gyrase C-terminal domain, beta-propeller AS145_02895 PF00521 DNA gyrase/topoisomerase IV, subunit A AS145_02930 PF00226 DnaJ domain AS145_02930 PF01556 DnaJ C terminal domain AS145_02930 PF00684 DnaJ central domain AS145_02935 PF00578 AhpC/TSA family AS145_02960 PF01553 Acyltransferase AS145_02965 PF04012 PspA/IM30 family AS145_02980 PF01541 GIY-YIG catalytic domain AS145_02990 PF00892 EamA-like transporter family AS145_02995 PF03167 Uracil DNA glycosylase superfamily AS145_03000 PF00892 EamA-like transporter family AS145_03010 PF00950 ABC 3 transport family AS145_03015 PF00005 ABC transporter AS145_03020 PF01297 Zinc-uptake complex component A periplasmic AS145_03040 PF01476 LysM domain AS145_03040 PF01551 Peptidase family M23 AS145_03040 PF08525 Opacity-associated protein A N-terminal motif AS145_03045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS145_03050 PF04222 Protein of unknown function (DUF416) AS145_03065 PF02028 BCCT, betaine/carnitine/choline family transporter AS145_03070 PF00488 MutS domain V AS145_03070 PF05190 MutS family domain IV AS145_03070 PF01624 MutS domain I AS145_03070 PF05188 MutS domain II AS145_03070 PF05192 MutS domain III AS145_03075 PF00589 Phage integrase family AS145_03075 PF13356 Arm DNA-binding domain AS145_03090 PF02464 Competence-damaged protein AS145_03095 PF00154 recA bacterial DNA recombination protein AS145_03100 PF02631 RecX family AS145_03105 PF02272 DHHA1 domain AS145_03105 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AS145_03105 PF01411 tRNA synthetases class II (A) AS145_03110 PF00696 Amino acid kinase family AS145_03110 PF01842 ACT domain AS145_03110 PF13840 ACT domain AS145_03115 PF02599 Global regulator protein family AS145_03170 PF00768 D-alanyl-D-alanine carboxypeptidase AS145_03175 PF09335 SNARE associated Golgi protein AS145_03180 PF01595 Cyclin M transmembrane N-terminal domain AS145_03180 PF03471 Transporter associated domain AS145_03180 PF00571 CBS domain AS145_03185 PF08264 Anticodon-binding domain of tRNA AS145_03185 PF00133 tRNA synthetases class I (I, L, M and V) AS145_03185 PF10458 Valyl tRNA synthetase tRNA binding arm AS145_03190 PF04364 DNA polymerase III chi subunit, HolC AS145_03195 PF00883 Cytosol aminopeptidase family, catalytic domain AS145_03195 PF02789 Cytosol aminopeptidase family, N-terminal domain AS145_03200 PF03739 Lipopolysaccharide export system permease LptF/LptG AS145_03205 PF03739 Lipopolysaccharide export system permease LptF/LptG AS145_03220 PF13356 Arm DNA-binding domain AS145_03220 PF00589 Phage integrase family AS145_03235 PF08346 AntA/AntB antirepressor AS145_03235 PF10548 P22AR C-terminal domain AS145_03260 PF00909 Ammonium Transporter Family AS145_03265 PF01938 TRAM domain AS145_03265 PF05958 tRNA (Uracil-5-)-methyltransferase AS145_03270 PF07963 Prokaryotic N-terminal methylation motif AS145_03270 PF00114 Pilin (bacterial filament) AS145_03275 PF01026 TatD related DNase AS145_03280 PF07662 Na+ dependent nucleoside transporter C-terminus AS145_03280 PF07670 Nucleoside recognition AS145_03280 PF01773 Na+ dependent nucleoside transporter N-terminus AS145_03290 PF01791 DeoC/LacD family aldolase AS145_03295 PF00591 Glycosyl transferase family, a/b domain AS145_03295 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AS145_03295 PF02885 Glycosyl transferase family, helical bundle domain AS145_03300 PF01676 Metalloenzyme superfamily AS145_03305 PF01048 Phosphorylase superfamily AS145_03310 PF00563 EAL domain AS145_03310 PF00990 Diguanylate cyclase, GGDEF domain AS145_03310 PF08448 PAS fold AS145_03310 PF08447 PAS fold AS145_03310 PF13426 PAS domain AS145_03310 PF05231 MASE1 AS145_03320 PF18429 Domain of unknown function (DUF5609) AS145_03335 PF18073 Rubredoxin metal binding domain AS145_03340 PF07238 PilZ domain AS145_03345 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AS145_03350 PF00216 Bacterial DNA-binding protein AS145_03360 PF01207 Dihydrouridine synthase (Dus) AS145_03380 PF05525 Branched-chain amino acid transport protein AS145_03385 PF05525 Branched-chain amino acid transport protein AS145_03390 PF05175 Methyltransferase small domain AS145_03395 PF00270 DEAD/DEAH box helicase AS145_03395 PF00271 Helicase conserved C-terminal domain AS145_03400 PF03883 Peroxide stress protein YaaA AS145_03405 PF00437 Type II/IV secretion system protein AS145_03410 PF00437 Type II/IV secretion system protein AS145_03415 PF01168 Alanine racemase, N-terminal domain AS145_03420 PF03807 NADP oxidoreductase coenzyme F420-dependent AS145_03420 PF14748 Pyrroline-5-carboxylate reductase dimerisation AS145_03425 PF02325 YGGT family AS145_03430 PF02594 Uncharacterised ACR, YggU family COG1872 AS145_03445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS145_03455 PF00132 Bacterial transferase hexapeptide (six repeats) AS145_03460 PF10952 Protein of unknown function (DUF2753) AS145_03465 PF00378 Enoyl-CoA hydratase/isomerase AS145_03480 PF00106 short chain dehydrogenase AS145_03485 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS145_03485 PF03129 Anticodon binding domain AS145_03485 PF04073 Aminoacyl-tRNA editing domain AS145_03490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_03490 PF00672 HAMP domain AS145_03495 PF07499 RuvA, C-terminal domain AS145_03495 PF01330 RuvA N terminal domain AS145_03500 PF05491 RuvB C-terminal winged helix domain AS145_03500 PF05496 Holliday junction DNA helicase RuvB P-loop domain AS145_03500 PF17864 RuvB AAA lid domain AS145_03505 PF01654 Cytochrome bd terminal oxidase subunit I AS145_03510 PF02322 Cytochrome bd terminal oxidase subunit II AS145_03515 PF08173 Membrane bound YbgT-like protein AS145_03520 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) AS145_03525 PF03061 Thioesterase superfamily AS145_03530 PF01618 MotA/TolQ/ExbB proton channel family AS145_03535 PF02472 Biopolymer transport protein ExbD/TolR AS145_03545 PF04052 TolB amino-terminal domain AS145_03545 PF07676 WD40-like Beta Propeller Repeat AS145_03550 PF00691 OmpA family AS145_03555 PF13174 Tetratricopeptide repeat AS145_03555 PF16331 TolA binding protein trimerisation AS145_03610 PF00672 HAMP domain AS145_03610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_03615 PF02445 Quinolinate synthetase A protein AS145_03620 PF01263 Aldose 1-epimerase AS145_03625 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS145_03625 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AS145_03630 PF02446 4-alpha-glucanotransferase AS145_03635 PF02806 Alpha amylase, C-terminal all-beta domain AS145_03635 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AS145_03635 PF00128 Alpha amylase, catalytic domain AS145_03640 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AS145_03640 PF00128 Alpha amylase, catalytic domain AS145_03645 PF01641 SelR domain AS145_03655 PF00293 NUDIX domain AS145_03660 PF16884 N-terminal domain of oxidoreductase AS145_03660 PF00107 Zinc-binding dehydrogenase AS145_03665 PF02566 OsmC-like protein AS145_03670 PF01047 MarR family AS145_03685 PF01037 Lrp/AsnC ligand binding domain AS145_03695 PF07690 Major Facilitator Superfamily AS145_03715 PF00209 Sodium:neurotransmitter symporter family AS145_03725 PF00209 Sodium:neurotransmitter symporter family AS145_03750 PF00392 Bacterial regulatory proteins, gntR family AS145_03750 PF00155 Aminotransferase class I and II AS145_03760 PF01810 LysE type translocator AS145_03765 PF01177 Asp/Glu/Hydantoin racemase AS145_03770 PF00394 Multicopper oxidase AS145_03770 PF07731 Multicopper oxidase AS145_03770 PF07732 Multicopper oxidase AS145_03780 PF04074 YhcH/YjgK/YiaL AS145_03785 PF00871 Acetokinase family AS145_03790 PF00924 Mechanosensitive ion channel AS145_03795 PF03734 L,D-transpeptidase catalytic domain AS145_03795 PF17969 L,D-transpeptidase C-terminal domain AS145_03800 PF00474 Sodium:solute symporter family AS145_03805 PF00561 alpha/beta hydrolase fold AS145_03830 PF02525 Flavodoxin-like fold AS145_03835 PF03466 LysR substrate binding domain AS145_03835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_03840 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AS145_03850 PF00005 ABC transporter AS145_03850 PF12848 ABC transporter AS145_03855 PF00571 CBS domain AS145_03855 PF01380 SIS domain AS145_03860 PF01957 NfeD-like C-terminal, partner-binding AS145_03865 PF16200 C-terminal region of band_7 AS145_03865 PF01145 SPFH domain / Band 7 family AS145_03870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS145_03870 PF14824 Sirohaem biosynthesis protein central AS145_03870 PF10414 Sirohaem synthase dimerisation region AS145_03875 PF01507 Phosphoadenosine phosphosulfate reductase family AS145_03880 PF00009 Elongation factor Tu GTP binding domain AS145_03885 PF02080 TrkA-C domain AS145_03885 PF03600 Citrate transporter AS145_03910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_03910 PF08447 PAS fold AS145_03930 PF00005 ABC transporter AS145_03945 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AS145_03960 PF00719 Inorganic pyrophosphatase AS145_03965 PF08245 Mur ligase middle domain AS145_03965 PF01225 Mur ligase family, catalytic domain AS145_03965 PF02875 Mur ligase family, glutamate ligase domain AS145_03970 PF02441 Flavoprotein AS145_03975 PF00440 Bacterial regulatory proteins, tetR family AS145_03980 PF00156 Phosphoribosyl transferase domain AS145_03985 PF00005 ABC transporter AS145_03990 PF01061 ABC-2 type transporter AS145_03995 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component AS145_04000 PF01869 BadF/BadG/BcrA/BcrD ATPase family AS145_04020 PF02569 Pantoate-beta-alanine ligase AS145_04025 PF02548 Ketopantoate hydroxymethyltransferase AS145_04030 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AS145_04035 PF01743 Poly A polymerase head domain AS145_04035 PF12627 Probable RNA and SrmB- binding site of polymerase A AS145_04035 PF12626 Polymerase A arginine-rich C-terminus AS145_04040 PF00749 tRNA synthetases class I (E and Q), catalytic domain AS145_04045 PF01258 Prokaryotic dksA/traR C4-type zinc finger AS145_04050 PF17746 SfsA N-terminal OB domain AS145_04050 PF03749 Sugar fermentation stimulation protein RE domain AS145_04060 PF00271 Helicase conserved C-terminal domain AS145_04060 PF08482 ATP-dependent helicase C-terminal AS145_04060 PF04408 Helicase associated domain (HA2) AS145_04060 PF00270 DEAD/DEAH box helicase AS145_04065 PF00905 Penicillin binding protein transpeptidase domain AS145_04065 PF14814 Bifunctional transglycosylase second domain AS145_04065 PF00912 Transglycosylase AS145_04070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS145_04075 PF00893 Small Multidrug Resistance protein AS145_04080 PF00893 Small Multidrug Resistance protein AS145_04090 PF11849 Domain of unknown function (DUF3369) AS145_04100 PF01569 PAP2 superfamily AS145_04115 PF00202 Aminotransferase class-III AS145_04120 PF00654 Voltage gated chloride channel AS145_04130 PF01521 Iron-sulphur cluster biosynthesis AS145_04155 PF01810 LysE type translocator AS145_04160 PF02954 Bacterial regulatory protein, Fis family AS145_04165 PF01207 Dihydrouridine synthase (Dus) AS145_04170 PF02321 Outer membrane efflux protein AS145_04175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS145_04205 PF00072 Response regulator receiver domain AS145_04210 PF00854 POT family AS145_04215 PF00483 Nucleotidyl transferase AS145_04225 PF00459 Inositol monophosphatase family AS145_04230 PF03795 YCII-related domain AS145_04235 PF04279 Intracellular septation protein A AS145_04240 PF00282 Pyridoxal-dependent decarboxylase conserved domain AS145_04245 PF03006 Haemolysin-III related AS145_04250 PF02080 TrkA-C domain AS145_04250 PF06826 Predicted Permease Membrane Region AS145_04260 PF00072 Response regulator receiver domain AS145_04260 PF01584 CheW-like domain AS145_04265 PF13472 GDSL-like Lipase/Acylhydrolase family AS145_04270 PF00005 ABC transporter AS145_04280 PF08338 Domain of unknown function (DUF1731) AS145_04280 PF01370 NAD dependent epimerase/dehydratase family AS145_04285 PF00563 EAL domain AS145_04285 PF12792 CSS motif domain associated with EAL AS145_04290 PF00155 Aminotransferase class I and II AS145_04295 PF04389 Peptidase family M28 AS145_04295 PF01483 Proprotein convertase P-domain AS145_04300 PF02390 Putative methyltransferase AS145_04305 PF04320 Protein with unknown function (DUF469) AS145_04310 PF04960 Glutaminase AS145_04315 PF00581 Rhodanese-like domain AS145_04320 PF05922 Peptidase inhibitor I9 AS145_04320 PF00082 Subtilase family AS145_04325 PF06004 Bacterial protein of unknown function (DUF903) AS145_04330 PF00664 ABC transporter transmembrane region AS145_04330 PF00005 ABC transporter AS145_04335 PF00561 alpha/beta hydrolase fold AS145_04350 PF05547 Immune inhibitor A peptidase M6 AS145_04350 PF00801 PKD domain AS145_04355 PF06877 Regulator of ribonuclease activity B AS145_04360 PF00563 EAL domain AS145_04360 PF00990 Diguanylate cyclase, GGDEF domain AS145_04360 PF03707 Bacterial signalling protein N terminal repeat AS145_04380 PF09905 DNA-binding protein VF530 AS145_04385 PF02666 Phosphatidylserine decarboxylase AS145_04390 PF03193 RsgA GTPase AS145_04395 PF00929 Exonuclease AS145_04425 PF00313 'Cold-shock' DNA-binding domain AS145_04435 PF00672 HAMP domain AS145_04435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_04440 PF00749 tRNA synthetases class I (E and Q), catalytic domain AS145_04445 PF00749 tRNA synthetases class I (E and Q), catalytic domain AS145_04500 PF00704 Glycosyl hydrolases family 18 AS145_04500 PF06483 Chitinase C AS145_04515 PF02472 Biopolymer transport protein ExbD/TolR AS145_04520 PF01618 MotA/TolQ/ExbB proton channel family AS145_04525 PF01618 MotA/TolQ/ExbB proton channel family AS145_04535 PF00593 TonB dependent receptor AS145_04535 PF07715 TonB-dependent Receptor Plug Domain AS145_04540 PF00528 Binding-protein-dependent transport system inner membrane component AS145_04545 PF00528 Binding-protein-dependent transport system inner membrane component AS145_04545 PF12911 N-terminal TM domain of oligopeptide transport permease C AS145_04555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS145_04555 PF00005 ABC transporter AS145_04560 PF00005 ABC transporter AS145_04560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS145_04565 PF01546 Peptidase family M20/M25/M40 AS145_04565 PF07687 Peptidase dimerisation domain AS145_04570 PF00156 Phosphoribosyl transferase domain AS145_04580 PF07417 Sigma factor-binding transcriptional regulator Crl AS145_04585 PF00696 Amino acid kinase family AS145_04585 PF01472 PUA domain AS145_04590 PF00171 Aldehyde dehydrogenase family AS145_04600 PF00582 Universal stress protein family AS145_04615 PF01568 Molydopterin dinucleotide binding domain AS145_04615 PF00384 Molybdopterin oxidoreductase AS145_04615 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS145_04615 PF04324 BFD-like [2Fe-2S] binding domain AS145_04620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS145_04620 PF14824 Sirohaem biosynthesis protein central AS145_04620 PF10414 Sirohaem synthase dimerisation region AS145_04630 PF00005 ABC transporter AS145_04635 PF00528 Binding-protein-dependent transport system inner membrane component AS145_04640 PF00005 ABC transporter AS145_04645 PF18267 Rubredoxin NAD+ reductase C-terminal domain AS145_04645 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS145_04645 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS145_04645 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS145_04645 PF04324 BFD-like [2Fe-2S] binding domain AS145_04645 PF13806 Rieske-like [2Fe-2S] domain AS145_04650 PF18267 Rubredoxin NAD+ reductase C-terminal domain AS145_04650 PF13806 Rieske-like [2Fe-2S] domain AS145_04650 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS145_04650 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS145_04650 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS145_04650 PF04324 BFD-like [2Fe-2S] binding domain AS145_04655 PF00294 pfkB family carbohydrate kinase AS145_04660 PF04227 Indigoidine synthase A like protein AS145_04665 PF00194 Eukaryotic-type carbonic anhydrase AS145_04670 PF03150 Di-haem cytochrome c peroxidase AS145_04670 PF00034 Cytochrome c AS145_04705 PF00550 Phosphopantetheine attachment site AS145_04710 PF00550 Phosphopantetheine attachment site AS145_04720 PF00501 AMP-binding enzyme AS145_04720 PF13193 AMP-binding enzyme C-terminal domain AS145_04725 PF07977 FabA-like domain AS145_04735 PF00221 Aromatic amino acid lyase AS145_04760 PF02801 Beta-ketoacyl synthase, C-terminal domain AS145_04760 PF00109 Beta-ketoacyl synthase, N-terminal domain AS145_04775 PF02801 Beta-ketoacyl synthase, C-terminal domain AS145_04775 PF00109 Beta-ketoacyl synthase, N-terminal domain AS145_04785 PF00994 Probable molybdopterin binding domain AS145_04795 PF06738 Putative threonine/serine exporter AS145_04800 PF12821 Threonine/Serine exporter, ThrE AS145_04805 PF00186 Dihydrofolate reductase AS145_04810 PF00571 CBS domain AS145_04810 PF00005 ABC transporter AS145_04815 PF00528 Binding-protein-dependent transport system inner membrane component AS145_04820 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AS145_04825 PF01507 Phosphoadenosine phosphosulfate reductase family AS145_04830 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS145_04830 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS145_04835 PF00258 Flavodoxin AS145_04835 PF00667 FAD binding domain AS145_04835 PF00175 Oxidoreductase NAD-binding domain AS145_04840 PF02567 Phenazine biosynthesis-like protein AS145_04845 PF01336 OB-fold nucleic acid binding domain AS145_04845 PF00152 tRNA synthetases class II (D, K and N) AS145_04850 PF00472 RF-1 domain AS145_04850 PF03462 PCRF domain AS145_04855 PF02743 Cache domain AS145_04855 PF00672 HAMP domain AS145_04855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_04860 PF03616 Sodium/glutamate symporter AS145_04865 PF00710 Asparaginase, N-terminal AS145_04865 PF17763 Glutaminase/Asparaginase C-terminal domain AS145_04870 PF07023 Protein of unknown function (DUF1315) AS145_04875 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS145_04875 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AS145_04890 PF01343 Peptidase family S49 AS145_04895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AS145_04895 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS145_04900 PF00881 Nitroreductase family AS145_04905 PF14602 Hexapeptide repeat of succinyl-transferase AS145_04905 PF12464 Maltose acetyltransferase AS145_04910 PF01842 ACT domain AS145_04910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS145_04910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS145_04920 PF00107 Zinc-binding dehydrogenase AS145_04920 PF08240 Alcohol dehydrogenase GroES-like domain AS145_04925 PF03466 LysR substrate binding domain AS145_04925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_04930 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AS145_04930 PF02378 Phosphotransferase system, EIIC AS145_04930 PF00367 phosphotransferase system, EIIB AS145_04935 PF00474 Sodium:solute symporter family AS145_04945 PF02785 Biotin carboxylase C-terminal domain AS145_04945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS145_04945 PF00289 Biotin carboxylase, N-terminal domain AS145_04950 PF00364 Biotin-requiring enzyme AS145_04955 PF01220 Dehydroquinase class II AS145_04960 PF16177 Acetyl-coenzyme A synthetase N-terminus AS145_04960 PF00501 AMP-binding enzyme AS145_04960 PF13193 AMP-binding enzyme C-terminal domain AS145_04970 PF13188 PAS domain AS145_04970 PF03707 Bacterial signalling protein N terminal repeat AS145_04970 PF00990 Diguanylate cyclase, GGDEF domain AS145_04970 PF00563 EAL domain AS145_04990 PF02613 Nitrate reductase delta subunit AS145_05005 PF00464 Serine hydroxymethyltransferase AS145_05020 PF03477 ATP cone domain AS145_05025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AS145_05025 PF01872 RibD C-terminal domain AS145_05030 PF00677 Lumazine binding domain AS145_05035 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AS145_05035 PF00925 GTP cyclohydrolase II AS145_05045 PF00885 6,7-dimethyl-8-ribityllumazine synthase AS145_05050 PF01029 NusB family AS145_05055 PF02769 AIR synthase related protein, C-terminal domain AS145_05055 PF00586 AIR synthase related protein, N-terminal domain AS145_05060 PF04608 Phosphatidylglycerophosphatase A AS145_05065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS145_05065 PF00005 ABC transporter AS145_05070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS145_05080 PF12911 N-terminal TM domain of oligopeptide transport permease C AS145_05080 PF00528 Binding-protein-dependent transport system inner membrane component AS145_05085 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AS145_05085 PF02780 Transketolase, C-terminal domain AS145_05085 PF02779 Transketolase, pyrimidine binding domain AS145_05090 PF00348 Polyprenyl synthetase AS145_05095 PF02609 Exonuclease VII small subunit AS145_05100 PF01618 MotA/TolQ/ExbB proton channel family AS145_05105 PF00691 OmpA family AS145_05105 PF13677 Membrane MotB of proton-channel complex MotA/MotB AS145_05110 PF03449 Transcription elongation factor, N-terminal AS145_05110 PF01272 Transcription elongation factor, GreA/GreB, C-term AS145_05120 PF01985 CRS1 / YhbY (CRM) domain AS145_05125 PF01728 FtsJ-like methyltransferase AS145_05130 PF00004 ATPase family associated with various cellular activities (AAA) AS145_05130 PF01434 Peptidase family M41 AS145_05130 PF17862 AAA+ lid domain AS145_05130 PF06480 FtsH Extracellular AS145_05135 PF00809 Pterin binding enzyme AS145_05140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AS145_05140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AS145_05140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AS145_05140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AS145_05145 PF00121 Triosephosphate isomerase AS145_05150 PF03840 Preprotein translocase SecG subunit AS145_05165 PF02576 RimP N-terminal domain AS145_05165 PF17384 RimP C-terminal SH3 domain AS145_05170 PF13184 NusA-like KH domain AS145_05170 PF08529 NusA N-terminal domain AS145_05170 PF00575 S1 RNA binding domain AS145_05175 PF08364 Bacterial translation initiation factor IF-2 associated region AS145_05175 PF00009 Elongation factor Tu GTP binding domain AS145_05175 PF04760 Translation initiation factor IF-2, N-terminal region AS145_05175 PF11987 Translation-initiation factor 2 AS145_05180 PF02033 Ribosome-binding factor A AS145_05185 PF09157 Pseudouridine synthase II TruB, C-terminal AS145_05185 PF01509 TruB family pseudouridylate synthase (N terminal domain) AS145_05185 PF16198 tRNA pseudouridylate synthase B C-terminal domain AS145_05190 PF00312 Ribosomal protein S15 AS145_05195 PF00013 KH domain AS145_05195 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AS145_05195 PF01138 3' exoribonuclease family, domain 1 AS145_05195 PF03725 3' exoribonuclease family, domain 2 AS145_05195 PF00575 S1 RNA binding domain AS145_05205 PF00563 EAL domain AS145_05205 PF00990 Diguanylate cyclase, GGDEF domain AS145_05205 PF03707 Bacterial signalling protein N terminal repeat AS145_05210 PF02635 DsrE/DsrF-like family AS145_05220 PF10415 Fumarase C C-terminus AS145_05220 PF00206 Lyase AS145_05225 PF03575 Peptidase family S51 AS145_05230 PF13722 5TM C-terminal transporter carbon starvation CstA AS145_05230 PF02554 Carbon starvation protein CstA AS145_05235 PF04397 LytTr DNA-binding domain AS145_05235 PF00072 Response regulator receiver domain AS145_05245 PF00196 Bacterial regulatory proteins, luxR family AS145_05245 PF00072 Response regulator receiver domain AS145_05250 PF00989 PAS fold AS145_05250 PF00512 His Kinase A (phospho-acceptor) domain AS145_05250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_05255 PF13247 4Fe-4S dicluster domain AS145_05260 PF03916 Polysulphide reductase, NrfD AS145_05265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS145_05265 PF00384 Molybdopterin oxidoreductase AS145_05265 PF01568 Molydopterin dinucleotide binding domain AS145_05295 PF03734 L,D-transpeptidase catalytic domain AS145_05295 PF17969 L,D-transpeptidase C-terminal domain AS145_05305 PF01523 Putative modulator of DNA gyrase AS145_05310 PF01523 Putative modulator of DNA gyrase AS145_05315 PF00258 Flavodoxin AS145_05320 PF02899 Phage integrase, N-terminal SAM-like domain AS145_05320 PF00589 Phage integrase family AS145_05325 PF01741 Large-conductance mechanosensitive channel, MscL AS145_05330 PF13098 Thioredoxin-like domain AS145_05330 PF10411 Disulfide bond isomerase protein N-terminus AS145_05335 PF02272 DHHA1 domain AS145_05335 PF01368 DHH family AS145_05335 PF17768 RecJ OB domain AS145_05340 PF13411 MerR HTH family regulatory protein AS145_05355 PF02508 Rnf-Nqr subunit, membrane protein AS145_05360 PF06821 Serine hydrolase AS145_05370 PF04055 Radical SAM superfamily AS145_05370 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AS145_05375 PF03099 Biotin/lipoate A/B protein ligase family AS145_05380 PF04359 Protein of unknown function (DUF493) AS145_05385 PF00768 D-alanyl-D-alanine carboxypeptidase AS145_05385 PF07943 Penicillin-binding protein 5, C-terminal domain AS145_05390 PF03330 Lytic transglycolase AS145_05390 PF05036 Sporulation related domain AS145_05395 PF13406 Transglycosylase SLT domain AS145_05400 PF01098 Cell cycle protein AS145_05405 PF00905 Penicillin binding protein transpeptidase domain AS145_05405 PF03717 Penicillin-binding Protein dimerisation domain AS145_05410 PF02590 Predicted SPOUT methyltransferase AS145_05420 PF01467 Cytidylyltransferase-like AS145_05435 PF13603 Leucyl-tRNA synthetase, Domain 2 AS145_05435 PF08264 Anticodon-binding domain of tRNA AS145_05435 PF00133 tRNA synthetases class I (I, L, M and V) AS145_05440 PF07295 Zinc-ribbon containing domain AS145_05445 PF00795 Carbon-nitrogen hydrolase AS145_05450 PF00571 CBS domain AS145_05450 PF03471 Transporter associated domain AS145_05455 PF02130 Uncharacterized protein family UPF0054 AS145_05460 PF02562 PhoH-like protein AS145_05465 PF01938 TRAM domain AS145_05465 PF04055 Radical SAM superfamily AS145_05465 PF00919 Uncharacterized protein family UPF0004 AS145_05470 PF01494 FAD binding domain AS145_05475 PF00857 Isochorismatase family AS145_05480 PF00313 'Cold-shock' DNA-binding domain AS145_05485 PF00990 Diguanylate cyclase, GGDEF domain AS145_05485 PF05230 MASE2 domain AS145_05500 PF13419 Haloacid dehalogenase-like hydrolase AS145_05510 PF00990 Diguanylate cyclase, GGDEF domain AS145_05510 PF08448 PAS fold AS145_05520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS145_05520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS145_05530 PF09997 Predicted membrane protein (DUF2238) AS145_05535 PF09285 Elongation factor P, C-terminal AS145_05535 PF08207 Elongation factor P (EF-P) KOW-like domain AS145_05535 PF01132 Elongation factor P (EF-P) OB domain AS145_05545 PF00478 IMP dehydrogenase / GMP reductase domain AS145_05555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_05555 PF00512 His Kinase A (phospho-acceptor) domain AS145_05555 PF08521 Two-component sensor kinase N-terminal AS145_05560 PF00486 Transcriptional regulatory protein, C terminal AS145_05560 PF00072 Response regulator receiver domain AS145_05580 PF00501 AMP-binding enzyme AS145_05595 PF06224 Winged helix DNA-binding domain AS145_05615 PF02313 Fumarate reductase subunit D AS145_05620 PF02300 Fumarate reductase subunit C AS145_05625 PF13085 2Fe-2S iron-sulfur cluster binding domain AS145_05625 PF13183 4Fe-4S dicluster domain AS145_05630 PF00890 FAD binding domain AS145_05630 PF02910 Fumarate reductase flavoprotein C-term AS145_05635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_05635 PF00672 HAMP domain AS145_05635 PF02743 Cache domain AS145_05640 PF03009 Glycerophosphoryl diester phosphodiesterase family AS145_05645 PF12795 Mechanosensitive ion channel porin domain AS145_05645 PF00924 Mechanosensitive ion channel AS145_05645 PF12794 Mechanosensitive ion channel inner membrane domain 1 AS145_05655 PF01476 LysM domain AS145_05655 PF01551 Peptidase family M23 AS145_05655 PF08525 Opacity-associated protein A N-terminal motif AS145_05670 PF03466 LysR substrate binding domain AS145_05670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_05685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_05685 PF00672 HAMP domain AS145_05685 PF02743 Cache domain AS145_05690 PF03466 LysR substrate binding domain AS145_05690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_05695 PF17092 Penicillin-binding protein OB-like domain AS145_05695 PF00912 Transglycosylase AS145_05695 PF00905 Penicillin binding protein transpeptidase domain AS145_05720 PF11741 AMIN domain AS145_05720 PF00263 Bacterial type II and III secretion system protein AS145_05720 PF03958 Bacterial type II/III secretion system short domain AS145_05720 PF07660 Secretin and TonB N terminus short domain AS145_05725 PF01202 Shikimate kinase AS145_05730 PF01761 3-dehydroquinate synthase AS145_05740 PF02086 D12 class N6 adenine-specific DNA methyltransferase AS145_05745 PF00834 Ribulose-phosphate 3 epimerase family AS145_05750 PF13419 Haloacid dehalogenase-like hydrolase AS145_05755 PF00579 tRNA synthetases class I (W and Y) AS145_05765 PF00117 Glutamine amidotransferase class-I AS145_05770 PF00202 Aminotransferase class-III AS145_05775 PF04958 Arginine N-succinyltransferase beta subunit AS145_05780 PF00171 Aldehyde dehydrogenase family AS145_05790 PF13419 Haloacid dehalogenase-like hydrolase AS145_05795 PF07690 Major Facilitator Superfamily AS145_05800 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AS145_05800 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AS145_05800 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AS145_05800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS145_05800 PF10371 Domain of unknown function AS145_05810 PF00128 Alpha amylase, catalytic domain AS145_05810 PF16657 Maltogenic Amylase, C-terminal domain AS145_05830 PF01048 Phosphorylase superfamily AS145_05835 PF04973 Nicotinamide mononucleotide transporter AS145_05840 PF02080 TrkA-C domain AS145_05840 PF03600 Citrate transporter AS145_05885 PF06071 Protein of unknown function (DUF933) AS145_05885 PF01926 50S ribosome-binding GTPase AS145_05890 PF01195 Peptidyl-tRNA hydrolase AS145_05895 PF00149 Calcineurin-like phosphoesterase AS145_05895 PF02872 5'-nucleotidase, C-terminal domain AS145_05900 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AS145_05900 PF14572 Phosphoribosyl synthetase-associated domain AS145_05915 PF03550 Outer membrane lipoprotein LolB AS145_05920 PF01488 Shikimate / quinate 5-dehydrogenase AS145_05920 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AS145_05920 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AS145_05925 PF03462 PCRF domain AS145_05925 PF00472 RF-1 domain AS145_05930 PF17827 PrmC N-terminal domain AS145_05930 PF13847 Methyltransferase domain AS145_05940 PF13369 Transglutaminase-like superfamily AS145_05945 PF00793 DAHP synthetase I family AS145_05950 PF00375 Sodium:dicarboxylate symporter family AS145_05955 PF01228 Glycine radical AS145_05960 PF03167 Uracil DNA glycosylase superfamily AS145_05975 PF00923 Transaldolase/Fructose-6-phosphate aldolase AS145_05980 PF01235 Sodium:alanine symporter family AS145_05985 PF11992 Domain of unknown function (DUF3488) AS145_05985 PF13559 Domain of unknown function (DUF4129) AS145_05985 PF01841 Transglutaminase-like superfamily AS145_05995 PF07726 ATPase family associated with various cellular activities (AAA) AS145_05995 PF17863 AAA lid domain AS145_06000 PF00144 Beta-lactamase AS145_06005 PF00854 POT family AS145_06010 PF03652 Holliday junction resolvase AS145_06015 PF02622 Uncharacterized ACR, COG1678 AS145_06020 PF12729 Four helix bundle sensory module for signal transduction AS145_06020 PF00672 HAMP domain AS145_06020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_06025 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AS145_06025 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AS145_06030 PF04452 RNA methyltransferase AS145_06035 PF04231 Endonuclease I AS145_06040 PF17283 SprT-like zinc ribbon domain AS145_06040 PF10263 SprT-like family AS145_06045 PF02773 S-adenosylmethionine synthetase, C-terminal domain AS145_06045 PF02772 S-adenosylmethionine synthetase, central domain AS145_06045 PF00438 S-adenosylmethionine synthetase, N-terminal domain AS145_06050 PF02779 Transketolase, pyrimidine binding domain AS145_06050 PF02780 Transketolase, C-terminal domain AS145_06050 PF00456 Transketolase, thiamine diphosphate binding domain AS145_06060 PF00563 EAL domain AS145_06060 PF12792 CSS motif domain associated with EAL AS145_06070 PF01042 Endoribonuclease L-PSP AS145_06075 PF01965 DJ-1/PfpI family AS145_06085 PF03702 Anhydro-N-acetylmuramic acid kinase AS145_06090 PF01551 Peptidase family M23 AS145_06090 PF08525 Opacity-associated protein A N-terminal motif AS145_06090 PF01476 LysM domain AS145_06095 PF00579 tRNA synthetases class I (W and Y) AS145_06100 PF01204 Trehalase AS145_06110 PF01161 Phosphatidylethanolamine-binding protein AS145_06120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_06120 PF03466 LysR substrate binding domain AS145_06130 PF00155 Aminotransferase class I and II AS145_06135 PF07690 Major Facilitator Superfamily AS145_06140 PF03466 LysR substrate binding domain AS145_06140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_06145 PF00106 short chain dehydrogenase AS145_06150 PF01343 Peptidase family S49 AS145_06150 PF08496 Peptidase family S49 N-terminal AS145_06155 PF04996 Succinylarginine dihydrolase AS145_06160 PF01131 DNA topoisomerase AS145_06160 PF08272 Topoisomerase I zinc-ribbon-like AS145_06160 PF01396 Topoisomerase DNA binding C4 zinc finger AS145_06160 PF01751 Toprim domain AS145_06175 PF08447 PAS fold AS145_06175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_06180 PF02838 Glycosyl hydrolase family 20, domain 2 AS145_06180 PF00728 Glycosyl hydrolase family 20, catalytic domain AS145_06185 PF01869 BadF/BadG/BcrA/BcrD ATPase family AS145_06195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS145_06195 PF00005 ABC transporter AS145_06200 PF00005 ABC transporter AS145_06200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS145_06205 PF12911 N-terminal TM domain of oligopeptide transport permease C AS145_06205 PF00528 Binding-protein-dependent transport system inner membrane component AS145_06210 PF00528 Binding-protein-dependent transport system inner membrane component AS145_06215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS145_06220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_06220 PF00072 Response regulator receiver domain AS145_06220 PF09308 LuxQ, periplasmic AS145_06220 PF00512 His Kinase A (phospho-acceptor) domain AS145_06240 PF10725 Protein of unknown function (DUF2517) AS145_06250 PF05114 Protein of unknown function (DUF692) AS145_06270 PF08447 PAS fold AS145_06270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_06270 PF13426 PAS domain AS145_06285 PF04632 Fusaric acid resistance protein family AS145_06290 PF03453 MoeA N-terminal region (domain I and II) AS145_06290 PF03454 MoeA C-terminal region (domain IV) AS145_06290 PF00994 Probable molybdopterin binding domain AS145_06295 PF12804 MobA-like NTP transferase domain AS145_06300 PF00005 ABC transporter AS145_06305 PF00528 Binding-protein-dependent transport system inner membrane component AS145_06310 PF12849 PBP superfamily domain AS145_06315 PF02954 Bacterial regulatory protein, Fis family AS145_06315 PF00158 Sigma-54 interaction domain AS145_06315 PF00072 Response regulator receiver domain AS145_06320 PF00512 His Kinase A (phospho-acceptor) domain AS145_06320 PF00989 PAS fold AS145_06320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_06325 PF12728 Helix-turn-helix domain AS145_06325 PF12727 PBP superfamily domain AS145_06330 PF02634 FdhD/NarQ family AS145_06365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS145_06365 PF00384 Molybdopterin oxidoreductase AS145_06365 PF01568 Molydopterin dinucleotide binding domain AS145_06365 PF12838 4Fe-4S dicluster domain AS145_06365 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AS145_06365 PF12838 4Fe-4S dicluster domain AS145_06365 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AS145_06365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS145_06365 PF00384 Molybdopterin oxidoreductase AS145_06365 PF01568 Molydopterin dinucleotide binding domain AS145_06370 PF13247 4Fe-4S dicluster domain AS145_06380 PF00072 Response regulator receiver domain AS145_06385 PF03949 Malic enzyme, NAD binding domain AS145_06385 PF00390 Malic enzyme, N-terminal domain AS145_06390 PF05433 Glycine zipper 2TM domain AS145_06390 PF16998 17 kDa outer membrane surface antigen AS145_06400 PF00860 Permease family AS145_06405 PF10282 Lactonase, 7-bladed beta-propeller AS145_06415 PF00924 Mechanosensitive ion channel AS145_06415 PF12795 Mechanosensitive ion channel porin domain AS145_06415 PF12794 Mechanosensitive ion channel inner membrane domain 1 AS145_06420 PF00224 Pyruvate kinase, barrel domain AS145_06420 PF02887 Pyruvate kinase, alpha/beta domain AS145_06430 PF04151 Bacterial pre-peptidase C-terminal domain AS145_06430 PF04389 Peptidase family M28 AS145_06435 PF00999 Sodium/hydrogen exchanger family AS145_06435 PF02254 TrkA-N domain AS145_06445 PF04381 Putative exonuclease, RdgC AS145_06455 PF00149 Calcineurin-like phosphoesterase AS145_06455 PF12320 Type 5 capsule protein repressor C-terminal domain AS145_06460 PF13476 AAA domain AS145_06475 PF01292 Prokaryotic cytochrome b561 AS145_06485 PF17151 Periplasmic sensor domain AS145_06485 PF00990 Diguanylate cyclase, GGDEF domain AS145_06490 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AS145_06495 PF00391 PEP-utilising enzyme, mobile domain AS145_06495 PF05524 PEP-utilising enzyme, N-terminal AS145_06495 PF02896 PEP-utilising enzyme, TIM barrel domain AS145_06500 PF00381 PTS HPr component phosphorylation site AS145_06505 PF00291 Pyridoxal-phosphate dependent enzyme AS145_06510 PF00004 ATPase family associated with various cellular activities (AAA) AS145_06510 PF07724 AAA domain (Cdc48 subfamily) AS145_06510 PF17871 AAA lid domain AS145_06510 PF02861 Clp amino terminal domain, pathogenicity island component AS145_06510 PF10431 C-terminal, D2-small domain, of ClpB protein AS145_06520 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AS145_06520 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AS145_06525 PF01980 tRNA-methyltransferase O AS145_06525 PF18389 TrmO C-terminal domain AS145_06545 PF00005 ABC transporter AS145_06545 PF00664 ABC transporter transmembrane region AS145_06550 PF00664 ABC transporter transmembrane region AS145_06550 PF00005 ABC transporter AS145_06565 PF00072 Response regulator receiver domain AS145_06565 PF00486 Transcriptional regulatory protein, C terminal AS145_06575 PF03737 Aldolase/RraA AS145_06590 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AS145_06595 PF00588 SpoU rRNA Methylase family AS145_06600 PF13840 ACT domain AS145_06600 PF01842 ACT domain AS145_06600 PF03447 Homoserine dehydrogenase, NAD binding domain AS145_06600 PF00696 Amino acid kinase family AS145_06600 PF00742 Homoserine dehydrogenase AS145_06605 PF08544 GHMP kinases C terminal AS145_06605 PF00288 GHMP kinases N terminal domain AS145_06610 PF14821 Threonine synthase N terminus AS145_06610 PF00291 Pyridoxal-phosphate dependent enzyme AS145_06615 PF13474 SnoaL-like domain AS145_06630 PF12848 ABC transporter AS145_06630 PF00005 ABC transporter AS145_06640 PF01048 Phosphorylase superfamily AS145_06655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_06655 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS145_06655 PF01627 Hpt domain AS145_06655 PF00512 His Kinase A (phospho-acceptor) domain AS145_06655 PF00072 Response regulator receiver domain AS145_06655 PF00989 PAS fold AS145_06660 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AS145_06665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS145_06665 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AS145_06670 PF02690 Na+/Pi-cotransporter AS145_06680 PF13520 Amino acid permease AS145_06690 PF00324 Amino acid permease AS145_06695 PF00202 Aminotransferase class-III AS145_06700 PF00171 Aldehyde dehydrogenase family AS145_06705 PF07883 Cupin domain AS145_06705 PF01381 Helix-turn-helix AS145_06710 PF01266 FAD dependent oxidoreductase AS145_06725 PF00816 H-NS histone family AS145_06730 PF00793 DAHP synthetase I family AS145_06740 PF04954 Siderophore-interacting protein AS145_06740 PF08021 Siderophore-interacting FAD-binding domain AS145_06745 PF02321 Outer membrane efflux protein AS145_06750 PF00005 ABC transporter AS145_06750 PF02687 FtsX-like permease family AS145_06750 PF12704 MacB-like periplasmic core domain AS145_06755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS145_06765 PF02833 DHHA2 domain AS145_06765 PF01368 DHH family AS145_06775 PF02463 RecF/RecN/SMC N terminal domain AS145_06780 PF01513 ATP-NAD kinase AS145_06785 PF01025 GrpE AS145_06790 PF00012 Hsp70 protein AS145_06795 PF01556 DnaJ C terminal domain AS145_06795 PF00684 DnaJ central domain AS145_06795 PF00226 DnaJ domain AS145_06800 PF11471 Maltoporin periplasmic N-terminal extension AS145_06800 PF02264 LamB porin AS145_06805 PF00294 pfkB family carbohydrate kinase AS145_06810 PF00367 phosphotransferase system, EIIB AS145_06810 PF02378 Phosphotransferase system, EIIC AS145_06815 PF00251 Glycosyl hydrolases family 32 N-terminal domain AS145_06815 PF08244 Glycosyl hydrolases family 32 C terminal AS145_06820 PF13407 Periplasmic binding protein domain AS145_06820 PF00356 Bacterial regulatory proteins, lacI family AS145_06825 PF02308 MgtC family AS145_06840 PF01022 Bacterial regulatory protein, arsR family AS145_06845 PF04143 Sulphur transport AS145_06860 PF00873 AcrB/AcrD/AcrF family AS145_06865 PF03707 Bacterial signalling protein N terminal repeat AS145_06865 PF00990 Diguanylate cyclase, GGDEF domain AS145_06865 PF00563 EAL domain AS145_06870 PF03099 Biotin/lipoate A/B protein ligase family AS145_06870 PF10437 Bacterial lipoate protein ligase C-terminus AS145_06890 PF00873 AcrB/AcrD/AcrF family AS145_06895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS145_06895 PF00529 HlyD membrane-fusion protein of T1SS AS145_06905 PF00873 AcrB/AcrD/AcrF family AS145_06910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS145_06915 PF03372 Endonuclease/Exonuclease/phosphatase family AS145_06930 PF07690 Major Facilitator Superfamily AS145_06935 PF02424 ApbE family AS145_06940 PF00127 Copper binding proteins, plastocyanin/azurin family AS145_06955 PF01156 Inosine-uridine preferring nucleoside hydrolase AS145_06965 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AS145_06965 PF00034 Cytochrome c AS145_06975 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AS145_06975 PF06481 COX Aromatic Rich Motif AS145_06980 PF00115 Cytochrome C and Quinol oxidase polypeptide I AS145_06985 PF00510 Cytochrome c oxidase subunit III AS145_06990 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AS145_06995 PF01040 UbiA prenyltransferase family AS145_07000 PF07690 Major Facilitator Superfamily AS145_07010 PF00672 HAMP domain AS145_07010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_07010 PF00512 His Kinase A (phospho-acceptor) domain AS145_07010 PF01627 Hpt domain AS145_07010 PF00072 Response regulator receiver domain AS145_07015 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AS145_07025 PF00072 Response regulator receiver domain AS145_07025 PF00486 Transcriptional regulatory protein, C terminal AS145_07035 PF00384 Molybdopterin oxidoreductase AS145_07035 PF01568 Molydopterin dinucleotide binding domain AS145_07035 PF18364 Molybdopterin oxidoreductase N-terminal domain AS145_07040 PF02613 Nitrate reductase delta subunit AS145_07080 PF04002 RadC-like JAB domain AS145_07120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_07120 PF03466 LysR substrate binding domain AS145_07135 PF00696 Amino acid kinase family AS145_07140 PF06545 Protein of unknown function (DUF1116) AS145_07145 PF00549 CoA-ligase AS145_07145 PF02629 CoA binding domain AS145_07150 PF00857 Isochorismatase family AS145_07165 PF05930 Prophage CP4-57 regulatory protein (AlpA) AS145_07185 PF07662 Na+ dependent nucleoside transporter C-terminus AS145_07185 PF07670 Nucleoside recognition AS145_07185 PF01773 Na+ dependent nucleoside transporter N-terminus AS145_07215 PF00290 Tryptophan synthase alpha chain AS145_07220 PF00291 Pyridoxal-phosphate dependent enzyme AS145_07225 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AS145_07225 PF00218 Indole-3-glycerol phosphate synthase AS145_07230 PF02885 Glycosyl transferase family, helical bundle domain AS145_07230 PF00591 Glycosyl transferase family, a/b domain AS145_07235 PF02885 Glycosyl transferase family, helical bundle domain AS145_07235 PF00117 Glutamine amidotransferase class-I AS145_07235 PF00591 Glycosyl transferase family, a/b domain AS145_07240 PF04715 Anthranilate synthase component I, N terminal region AS145_07240 PF00425 chorismate binding enzyme AS145_07245 PF02811 PHP domain AS145_07250 PF01300 Telomere recombination AS145_07255 PF02616 Segregation and condensation protein ScpA AS145_07260 PF04079 Segregation and condensation complex subunit ScpB AS145_07265 PF01479 S4 domain AS145_07265 PF00849 RNA pseudouridylate synthase AS145_07285 PF08361 MAATS-type transcriptional repressor, C-terminal region AS145_07285 PF00440 Bacterial regulatory proteins, tetR family AS145_07290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS145_07290 PF00529 HlyD membrane-fusion protein of T1SS AS145_07295 PF00873 AcrB/AcrD/AcrF family AS145_07300 PF16363 GDP-mannose 4,6 dehydratase AS145_07310 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AS145_07315 PF01943 Polysaccharide biosynthesis protein AS145_07325 PF16363 GDP-mannose 4,6 dehydratase AS145_07330 PF01370 NAD dependent epimerase/dehydratase family AS145_07335 PF01050 Mannose-6-phosphate isomerase AS145_07335 PF00483 Nucleotidyl transferase AS145_07345 PF00953 Glycosyl transferase family 4 AS145_07350 PF04321 RmlD substrate binding domain AS145_07355 PF00483 Nucleotidyl transferase AS145_07365 PF02706 Chain length determinant protein AS145_07385 PF06082 Exopolysaccharide biosynthesis protein YbjH AS145_07395 PF04337 Protein of unknown function, DUF480 AS145_07400 PF00271 Helicase conserved C-terminal domain AS145_07400 PF00176 SNF2 family N-terminal domain AS145_07400 PF04434 SWIM zinc finger AS145_07405 PF05472 DNA replication terminus site-binding protein (Ter protein) AS145_07415 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AS145_07420 PF00676 Dehydrogenase E1 component AS145_07425 PF02780 Transketolase, C-terminal domain AS145_07425 PF02779 Transketolase, pyrimidine binding domain AS145_07430 PF02817 e3 binding domain AS145_07430 PF00364 Biotin-requiring enzyme AS145_07430 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS145_07435 PF00313 'Cold-shock' DNA-binding domain AS145_07460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS145_07465 PF00892 EamA-like transporter family AS145_07470 PF00455 DeoR C terminal sensor domain AS145_07470 PF08220 DeoR-like helix-turn-helix domain AS145_07480 PF04055 Radical SAM superfamily AS145_07485 PF00923 Transaldolase/Fructose-6-phosphate aldolase AS145_07495 PF01966 HD domain AS145_07495 PF11871 Domain of unknown function (DUF3391) AS145_07500 PF01479 S4 domain AS145_07500 PF00849 RNA pseudouridylate synthase AS145_07510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS145_07515 PF12850 Calcineurin-like phosphoesterase superfamily domain AS145_07530 PF13144 Chaperone for flagella basal body P-ring formation AS145_07535 PF00072 Response regulator receiver domain AS145_07535 PF01584 CheW-like domain AS145_07540 PF01739 CheR methyltransferase, SAM binding domain AS145_07540 PF03705 CheR methyltransferase, all-alpha domain AS145_07545 PF00460 Flagella basal body rod protein AS145_07550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AS145_07550 PF00460 Flagella basal body rod protein AS145_07560 PF07559 Flagellar basal body protein FlaE AS145_07560 PF00460 Flagella basal body rod protein AS145_07560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AS145_07565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AS145_07565 PF00460 Flagella basal body rod protein AS145_07570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AS145_07570 PF00460 Flagella basal body rod protein AS145_07575 PF02107 Flagellar L-ring protein AS145_07580 PF02119 Flagellar P-ring protein AS145_07585 PF10135 Rod binding protein AS145_07585 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AS145_07590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AS145_07590 PF00460 Flagella basal body rod protein AS145_07595 PF00669 Bacterial flagellin N-terminal helical region AS145_07600 PF00571 CBS domain AS145_07600 PF03448 MgtE intracellular N domain AS145_07600 PF01769 Divalent cation transporter AS145_07605 PF02541 Ppx/GppA phosphatase family AS145_07610 PF17941 Polyphosphate kinase C-terminal domain 1 AS145_07610 PF02503 Polyphosphate kinase middle domain AS145_07610 PF13090 Polyphosphate kinase C-terminal domain 2 AS145_07610 PF13089 Polyphosphate kinase N-terminal domain AS145_07615 PF01842 ACT domain AS145_07625 PF02954 Bacterial regulatory protein, Fis family AS145_07625 PF00072 Response regulator receiver domain AS145_07625 PF00158 Sigma-54 interaction domain AS145_07630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_07630 PF00512 His Kinase A (phospho-acceptor) domain AS145_07630 PF00989 PAS fold AS145_07635 PF00158 Sigma-54 interaction domain AS145_07635 PF02954 Bacterial regulatory protein, Fis family AS145_07640 PF01784 NIF3 (NGG1p interacting factor 3) AS145_07645 PF00551 Formyl transferase AS145_07650 PF02769 AIR synthase related protein, C-terminal domain AS145_07650 PF00586 AIR synthase related protein, N-terminal domain AS145_07665 PF00308 Bacterial dnaA protein AS145_07670 PF00463 Isocitrate lyase family AS145_07675 PF01274 Malate synthase AS145_07685 PF14437 MafB19-like deaminase AS145_07690 PF00528 Binding-protein-dependent transport system inner membrane component AS145_07695 PF00528 Binding-protein-dependent transport system inner membrane component AS145_07705 PF01895 PhoU domain AS145_07710 PF01595 Cyclin M transmembrane N-terminal domain AS145_07710 PF03471 Transporter associated domain AS145_07710 PF00571 CBS domain AS145_07720 PF02574 Homocysteine S-methyltransferase AS145_07720 PF00809 Pterin binding enzyme AS145_07720 PF02965 Vitamin B12 dependent methionine synthase, activation domain AS145_07720 PF02310 B12 binding domain AS145_07720 PF02607 B12 binding domain AS145_07725 PF13520 Amino acid permease AS145_07730 PF04116 Fatty acid hydroxylase superfamily AS145_07740 PF00005 ABC transporter AS145_07745 PF00528 Binding-protein-dependent transport system inner membrane component AS145_07750 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS145_07755 PF08448 PAS fold AS145_07755 PF00990 Diguanylate cyclase, GGDEF domain AS145_07760 PF07690 Major Facilitator Superfamily AS145_07765 PF05231 MASE1 AS145_07765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_07765 PF07730 Histidine kinase AS145_07770 PF00072 Response regulator receiver domain AS145_07770 PF00196 Bacterial regulatory proteins, luxR family AS145_07775 PF14760 Rnk N-terminus AS145_07775 PF01272 Transcription elongation factor, GreA/GreB, C-term AS145_07795 PF00245 Alkaline phosphatase AS145_07800 PF00245 Alkaline phosphatase AS145_07805 PF01926 50S ribosome-binding GTPase AS145_07810 PF07690 Major Facilitator Superfamily AS145_07815 PF00850 Histone deacetylase domain AS145_07825 PF06733 DEAD_2 AS145_07825 PF13307 Helicase C-terminal domain AS145_07830 PF13609 Gram-negative porin AS145_07840 PF00155 Aminotransferase class I and II AS145_07845 PF05872 Bacterial protein of unknown function (DUF853) AS145_07910 PF00155 Aminotransferase class I and II AS145_07910 PF00392 Bacterial regulatory proteins, gntR family AS145_07915 PF00701 Dihydrodipicolinate synthetase family AS145_07925 PF01037 Lrp/AsnC ligand binding domain AS145_07955 PF00816 H-NS histone family AS145_07995 PF00664 ABC transporter transmembrane region AS145_07995 PF00005 ABC transporter AS145_08000 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AS145_08005 PF03966 Trm112p-like protein AS145_08010 PF02348 Cytidylyltransferase AS145_08015 PF00072 Response regulator receiver domain AS145_08015 PF00196 Bacterial regulatory proteins, luxR family AS145_08020 PF08459 UvrC Helix-hairpin-helix N-terminal AS145_08020 PF02151 UvrB/uvrC motif AS145_08020 PF01541 GIY-YIG catalytic domain AS145_08025 PF01066 CDP-alcohol phosphatidyltransferase AS145_08105 PF01258 Prokaryotic dksA/traR C4-type zinc finger AS145_08225 PF06892 Phage regulatory protein CII (CP76) AS145_08240 PF00717 Peptidase S24-like AS145_08250 PF00589 Phage integrase family AS145_08250 PF02899 Phage integrase, N-terminal SAM-like domain AS145_08260 PF00589 Phage integrase family AS145_08260 PF13356 Arm DNA-binding domain AS145_08280 PF03050 Transposase IS66 family AS145_08280 PF13817 IS66 C-terminal element AS145_08280 PF13007 Transposase C of IS166 homeodomain AS145_08280 PF13005 zinc-finger binding domain of transposase IS66 AS145_08290 PF00171 Aldehyde dehydrogenase family AS145_08300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS145_08300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS145_08300 PF00205 Thiamine pyrophosphate enzyme, central domain AS145_08305 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AS145_08305 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AS145_08310 PF13407 Periplasmic binding protein domain AS145_08315 PF00005 ABC transporter AS145_08320 PF02653 Branched-chain amino acid transport system / permease component AS145_08325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AS145_08325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AS145_08330 PF00294 pfkB family carbohydrate kinase AS145_08335 PF01261 Xylose isomerase-like TIM barrel AS145_08340 PF04962 KduI/IolB family AS145_08345 PF01609 Transposase DDE domain AS145_08345 PF05598 Transposase domain (DUF772) AS145_08350 PF01527 Transposase AS145_08355 PF00665 Integrase core domain AS145_08355 PF13276 HTH-like domain AS145_08390 PF01757 Acyltransferase family AS145_08400 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB AS145_08405 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) AS145_08425 PF00037 4Fe-4S binding domain AS145_08425 PF13247 4Fe-4S dicluster domain AS145_08430 PF03916 Polysulphide reductase, NrfD AS145_08435 PF00149 Calcineurin-like phosphoesterase AS145_08445 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AS145_08450 PF09190 DALR domain AS145_08450 PF01406 tRNA synthetases class I (C) catalytic domain AS145_08465 PF13185 GAF domain AS145_08465 PF00990 Diguanylate cyclase, GGDEF domain AS145_08495 PF01169 Uncharacterized protein family UPF0016 AS145_08500 PF01253 Translation initiation factor SUI1 AS145_08510 PF02421 Ferrous iron transport protein B AS145_08510 PF07664 Ferrous iron transport protein B C terminus AS145_08510 PF07670 Nucleoside recognition AS145_08525 PF00483 Nucleotidyl transferase AS145_08530 PF00437 Type II/IV secretion system protein AS145_08540 PF01627 Hpt domain AS145_08540 PF00512 His Kinase A (phospho-acceptor) domain AS145_08540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_08540 PF00989 PAS fold AS145_08540 PF00072 Response regulator receiver domain AS145_08540 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS145_08545 PF01032 FecCD transport family AS145_08550 PF00005 ABC transporter AS145_08555 PF00583 Acetyltransferase (GNAT) family AS145_08560 PF00793 DAHP synthetase I family AS145_08565 PF01219 Prokaryotic diacylglycerol kinase AS145_08570 PF01842 ACT domain AS145_08570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS145_08570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS145_08575 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AS145_08580 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AS145_08585 PF01812 5-formyltetrahydrofolate cyclo-ligase family AS145_08595 PF01113 Dihydrodipicolinate reductase, N-terminus AS145_08595 PF05173 Dihydrodipicolinate reductase, C-terminus AS145_08600 PF00117 Glutamine amidotransferase class-I AS145_08600 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AS145_08605 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AS145_08605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS145_08605 PF02142 MGS-like domain AS145_08610 PF00682 HMGL-like AS145_08610 PF08502 LeuA allosteric (dimerisation) domain AS145_08615 PF07759 Protein of unknown function (DUF1615) AS145_08640 PF13302 Acetyltransferase (GNAT) domain AS145_08645 PF00270 DEAD/DEAH box helicase AS145_08645 PF00271 Helicase conserved C-terminal domain AS145_08655 PF14521 Lysine-specific metallo-endopeptidase AS145_08670 PF00376 MerR family regulatory protein AS145_08670 PF09278 MerR, DNA binding AS145_08685 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS145_08690 PF00528 Binding-protein-dependent transport system inner membrane component AS145_08700 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS145_08700 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AS145_08705 PF04898 Glutamate synthase central domain AS145_08705 PF01645 Conserved region in glutamate synthase AS145_08705 PF01493 GXGXG motif AS145_08705 PF00310 Glutamine amidotransferases class-II AS145_08710 PF16199 Radical_SAM C-terminal domain AS145_08710 PF04055 Radical SAM superfamily AS145_08715 PF00005 ABC transporter AS145_08715 PF03412 Peptidase C39 family AS145_08715 PF00664 ABC transporter transmembrane region AS145_08765 PF00324 Amino acid permease AS145_08775 PF03618 Kinase/pyrophosphorylase AS145_08780 PF02896 PEP-utilising enzyme, TIM barrel domain AS145_08780 PF00391 PEP-utilising enzyme, mobile domain AS145_08780 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AS145_08790 PF01915 Glycosyl hydrolase family 3 C-terminal domain AS145_08790 PF00933 Glycosyl hydrolase family 3 N terminal domain AS145_08790 PF14310 Fibronectin type III-like domain AS145_08800 PF01483 Proprotein convertase P-domain AS145_08800 PF00082 Subtilase family AS145_08820 PF07969 Amidohydrolase family AS145_08825 PF03180 NLPA lipoprotein AS145_08830 PF01569 PAP2 superfamily AS145_08835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS145_08835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS145_08835 PF11890 Domain of unknown function (DUF3410) AS145_08840 PF02774 Semialdehyde dehydrogenase, dimerisation domain AS145_08840 PF01118 Semialdehyde dehydrogenase, NAD binding domain AS145_08850 PF01416 tRNA pseudouridine synthase AS145_08855 PF17848 Acetyl-coA carboxylase zinc finger domain AS145_08855 PF01039 Carboxyl transferase domain AS145_08860 PF08245 Mur ligase middle domain AS145_08860 PF02875 Mur ligase family, glutamate ligase domain AS145_08865 PF05036 Sporulation related domain AS145_08870 PF04358 DsrC like protein AS145_08875 PF12805 FUSC-like inner membrane protein yccS AS145_08880 PF01027 Inhibitor of apoptosis-promoting Bax1 AS145_08900 PF00884 Sulfatase AS145_08900 PF08019 Phosphoethanolamine transferase EptA/EptB AS145_08910 PF09924 Uncharacterised conserved protein (DUF2156) AS145_08910 PF03706 Lysylphosphatidylglycerol synthase TM region AS145_08920 PF08447 PAS fold AS145_08920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_08925 PF00563 EAL domain AS145_08925 PF00990 Diguanylate cyclase, GGDEF domain AS145_08925 PF13426 PAS domain AS145_08930 PF00849 RNA pseudouridylate synthase AS145_08940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS145_08945 PF04209 homogentisate 1,2-dioxygenase AS145_08955 PF14497 Glutathione S-transferase, C-terminal domain AS145_08955 PF02798 Glutathione S-transferase, N-terminal domain AS145_08960 PF13417 Glutathione S-transferase, N-terminal domain AS145_08960 PF00043 Glutathione S-transferase, C-terminal domain AS145_08970 PF13537 Glutamine amidotransferase domain AS145_08970 PF00733 Asparagine synthase AS145_08980 PF02254 TrkA-N domain AS145_08980 PF00999 Sodium/hydrogen exchanger family AS145_08985 PF13344 Haloacid dehalogenase-like hydrolase AS145_08990 PF00962 Adenosine/AMP deaminase AS145_08995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AS145_09000 PF03741 Integral membrane protein TerC family AS145_09000 PF03471 Transporter associated domain AS145_09010 PF13183 4Fe-4S dicluster domain AS145_09010 PF01565 FAD binding domain AS145_09010 PF02913 FAD linked oxidases, C-terminal domain AS145_09020 PF03061 Thioesterase superfamily AS145_09025 PF00271 Helicase conserved C-terminal domain AS145_09025 PF00270 DEAD/DEAH box helicase AS145_09025 PF03880 DbpA RNA binding domain AS145_09030 PF13726 Na+-H+ antiporter family AS145_09030 PF03553 Na+/H+ antiporter family AS145_09035 PF00929 Exonuclease AS145_09040 PF00672 HAMP domain AS145_09040 PF12729 Four helix bundle sensory module for signal transduction AS145_09040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_09045 PF00691 OmpA family AS145_09045 PF18393 MotY N-terminal domain AS145_09050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS145_09055 PF10576 Iron-sulfur binding domain of endonuclease III AS145_09055 PF00633 Helix-hairpin-helix motif AS145_09055 PF00730 HhH-GPD superfamily base excision DNA repair protein AS145_09060 PF02508 Rnf-Nqr subunit, membrane protein AS145_09065 PF04205 FMN-binding domain AS145_09070 PF03116 NQR2, RnfD, RnfE family AS145_09075 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AS145_09075 PF13375 RnfC Barrel sandwich hybrid domain AS145_09075 PF10531 SLBB domain AS145_09075 PF12838 4Fe-4S dicluster domain AS145_09080 PF04060 Putative Fe-S cluster AS145_09085 PF02508 Rnf-Nqr subunit, membrane protein AS145_09090 PF00892 EamA-like transporter family AS145_09100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_09100 PF13426 PAS domain AS145_09100 PF08447 PAS fold AS145_09105 PF07055 Enoyl reductase FAD binding domain AS145_09105 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AS145_09105 PF12241 Trans-2-enoyl-CoA reductase catalytic region AS145_09110 PF03606 C4-dicarboxylate anaerobic carrier AS145_09115 PF00155 Aminotransferase class I and II AS145_09125 PF00462 Glutaredoxin AS145_09130 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AS145_09135 PF04851 Type III restriction enzyme, res subunit AS145_09135 PF00271 Helicase conserved C-terminal domain AS145_09140 PF00529 HlyD membrane-fusion protein of T1SS AS145_09140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS145_09145 PF11742 Protein of unknown function (DUF3302) AS145_09150 PF02554 Carbon starvation protein CstA AS145_09155 PF00072 Response regulator receiver domain AS145_09155 PF04397 LytTr DNA-binding domain AS145_09160 PF06580 Histidine kinase AS145_09160 PF07694 5TMR of 5TMR-LYT AS145_09165 PF01966 HD domain AS145_09170 PF00465 Iron-containing alcohol dehydrogenase AS145_09170 PF00171 Aldehyde dehydrogenase family AS145_09180 PF01914 MarC family integral membrane protein AS145_09185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS145_09190 PF00528 Binding-protein-dependent transport system inner membrane component AS145_09195 PF00528 Binding-protein-dependent transport system inner membrane component AS145_09195 PF12911 N-terminal TM domain of oligopeptide transport permease C AS145_09200 PF00005 ABC transporter AS145_09200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS145_09210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS145_09210 PF00005 ABC transporter AS145_09215 PF03741 Integral membrane protein TerC family AS145_09220 PF01168 Alanine racemase, N-terminal domain AS145_09220 PF00842 Alanine racemase, C-terminal domain AS145_09230 PF00375 Sodium:dicarboxylate symporter family AS145_09245 PF01979 Amidohydrolase family AS145_09255 PF00672 HAMP domain AS145_09255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_09260 PF01230 HIT domain AS145_09295 PF02355 Protein export membrane protein AS145_09295 PF13721 SecD export protein N-terminal TM region AS145_09295 PF07549 SecD/SecF GG Motif AS145_09300 PF02355 Protein export membrane protein AS145_09300 PF07549 SecD/SecF GG Motif AS145_09310 PF05661 Protein of unknown function (DUF808) AS145_09315 PF01432 Peptidase family M3 AS145_09315 PF08439 Oligopeptidase F AS145_09320 PF01432 Peptidase family M3 AS145_09320 PF08439 Oligopeptidase F AS145_09325 PF00860 Permease family AS145_09330 PF05728 Uncharacterised protein family (UPF0227) AS145_09335 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS145_09355 PF01906 Putative heavy-metal-binding AS145_09365 PF10414 Sirohaem synthase dimerisation region AS145_09365 PF14824 Sirohaem biosynthesis protein central AS145_09365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS145_09370 PF13187 4Fe-4S dicluster domain AS145_09370 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS145_09370 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS145_09375 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AS145_09375 PF00175 Oxidoreductase NAD-binding domain AS145_09380 PF17179 4Fe-4S dicluster domain AS145_09385 PF01734 Patatin-like phospholipase AS145_09390 PF02016 LD-carboxypeptidase N-terminal domain AS145_09390 PF17676 LD-carboxypeptidase C-terminal domain AS145_09395 PF00884 Sulfatase AS145_09405 PF01842 ACT domain AS145_09405 PF00696 Amino acid kinase family AS145_09410 PF00583 Acetyltransferase (GNAT) family AS145_09410 PF00696 Amino acid kinase family AS145_09415 PF01625 Peptide methionine sulfoxide reductase AS145_09440 PF00561 alpha/beta hydrolase fold AS145_09445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS145_09455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_09455 PF03466 LysR substrate binding domain AS145_09460 PF02652 L-lactate permease AS145_09465 PF02754 Cysteine-rich domain AS145_09470 PF02589 LUD domain AS145_09470 PF13183 4Fe-4S dicluster domain AS145_09470 PF11870 Domain of unknown function (DUF3390) AS145_09475 PF02589 LUD domain AS145_09480 PF01565 FAD binding domain AS145_09480 PF02913 FAD linked oxidases, C-terminal domain AS145_09495 PF00005 ABC transporter AS145_09505 PF07690 Major Facilitator Superfamily AS145_09520 PF01593 Flavin containing amine oxidoreductase AS145_09525 PF03239 Iron permease FTR1 family AS145_09540 PF03350 Uncharacterized protein family, UPF0114 AS145_09555 PF01740 STAS domain AS145_09555 PF00916 Sulfate permease family AS145_09590 PF01527 Transposase AS145_09600 PF01527 Transposase AS145_09605 PF13333 Integrase core domain AS145_09605 PF00665 Integrase core domain AS145_09605 PF13276 HTH-like domain AS145_09620 PF00842 Alanine racemase, C-terminal domain AS145_09620 PF01168 Alanine racemase, N-terminal domain AS145_09625 PF12729 Four helix bundle sensory module for signal transduction AS145_09625 PF00672 HAMP domain AS145_09625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_09630 PF00563 EAL domain AS145_09630 PF00990 Diguanylate cyclase, GGDEF domain AS145_09630 PF03707 Bacterial signalling protein N terminal repeat AS145_09635 PF01339 CheB methylesterase AS145_09635 PF00072 Response regulator receiver domain AS145_09640 PF03705 CheR methyltransferase, all-alpha domain AS145_09640 PF01739 CheR methyltransferase, SAM binding domain AS145_09645 PF01584 CheW-like domain AS145_09650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_09650 PF17202 Single cache domain 3 AS145_09650 PF00672 HAMP domain AS145_09655 PF01627 Hpt domain AS145_09655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_09655 PF01584 CheW-like domain AS145_09655 PF09078 CheY binding AS145_09655 PF02895 Signal transducing histidine kinase, homodimeric domain AS145_09665 PF00072 Response regulator receiver domain AS145_09670 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AS145_09670 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AS145_09675 PF13247 4Fe-4S dicluster domain AS145_09680 PF03916 Polysulphide reductase, NrfD AS145_09685 PF00374 Nickel-dependent hydrogenase AS145_09690 PF01750 Hydrogenase maturation protease AS145_09695 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE AS145_09700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS145_09705 PF00528 Binding-protein-dependent transport system inner membrane component AS145_09710 PF12911 N-terminal TM domain of oligopeptide transport permease C AS145_09710 PF00528 Binding-protein-dependent transport system inner membrane component AS145_09715 PF00005 ABC transporter AS145_09715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS145_09720 PF08402 TOBE domain AS145_09720 PF00005 ABC transporter AS145_09725 PF02492 CobW/HypB/UreG, nucleotide-binding domain AS145_09730 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AS145_09735 PF02769 AIR synthase related protein, C-terminal domain AS145_09735 PF00586 AIR synthase related protein, N-terminal domain AS145_09740 PF01924 Hydrogenase formation hypA family AS145_09745 PF01455 HupF/HypC family AS145_09750 PF01300 Telomere recombination AS145_09750 PF17788 HypF Kae1-like domain AS145_09750 PF07503 HypF finger AS145_09750 PF00708 Acylphosphatase AS145_09755 PF03144 Elongation factor Tu domain 2 AS145_09755 PF09107 Elongation factor SelB, winged helix AS145_09755 PF09105 Elongation factor SelB, winged helix AS145_09755 PF00009 Elongation factor Tu GTP binding domain AS145_09755 PF09106 Elongation factor SelB, winged helix AS145_09760 PF12390 Selenocysteine synthase N terminal AS145_09760 PF03841 L-seryl-tRNA selenium transferase AS145_09765 PF01750 Hydrogenase maturation protease AS145_09770 PF07450 Formate hydrogenlyase maturation protein HycH AS145_09775 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AS145_09780 PF12838 4Fe-4S dicluster domain AS145_09785 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AS145_09785 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AS145_09785 PF00374 Nickel-dependent hydrogenase AS145_09790 PF00146 NADH dehydrogenase AS145_09795 PF00361 Proton-conducting membrane transporter AS145_09800 PF00037 4Fe-4S binding domain AS145_09800 PF12798 4Fe-4S binding domain AS145_09805 PF02705 K+ potassium transporter AS145_09810 PF13247 4Fe-4S dicluster domain AS145_09810 PF12800 4Fe-4S binding domain AS145_09815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS145_09815 PF00384 Molybdopterin oxidoreductase AS145_09815 PF01568 Molydopterin dinucleotide binding domain AS145_09820 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS145_09820 PF00384 Molybdopterin oxidoreductase AS145_09820 PF01568 Molydopterin dinucleotide binding domain AS145_09830 PF01590 GAF domain AS145_09830 PF02954 Bacterial regulatory protein, Fis family AS145_09830 PF00158 Sigma-54 interaction domain AS145_09835 PF02634 FdhD/NarQ family AS145_09840 PF13662 Toprim domain AS145_09840 PF02132 RecR protein AS145_09845 PF00183 Hsp90 protein AS145_09845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_09850 PF05191 Adenylate kinase, active site lid AS145_09855 PF00762 Ferrochelatase AS145_09865 PF00294 pfkB family carbohydrate kinase AS145_09885 PF00483 Nucleotidyl transferase AS145_09895 PF07273 Protein of unknown function (DUF1439) AS145_09900 PF00425 chorismate binding enzyme AS145_09905 PF00501 AMP-binding enzyme AS145_09905 PF13193 AMP-binding enzyme C-terminal domain AS145_09910 PF00857 Isochorismatase family AS145_09910 PF00550 Phosphopantetheine attachment site AS145_09915 PF00501 AMP-binding enzyme AS145_09915 PF13193 AMP-binding enzyme C-terminal domain AS145_09915 PF00668 Condensation domain AS145_09915 PF00550 Phosphopantetheine attachment site AS145_09915 PF00975 Thioesterase domain AS145_09925 PF13193 AMP-binding enzyme C-terminal domain AS145_09925 PF00668 Condensation domain AS145_09925 PF07993 Male sterility protein AS145_09925 PF00550 Phosphopantetheine attachment site AS145_09925 PF00501 AMP-binding enzyme AS145_09930 PF00975 Thioesterase domain AS145_09930 PF00550 Phosphopantetheine attachment site AS145_09930 PF00668 Condensation domain AS145_09930 PF00501 AMP-binding enzyme AS145_09930 PF13193 AMP-binding enzyme C-terminal domain AS145_09935 PF01497 Periplasmic binding protein AS145_09940 PF01648 4'-phosphopantetheinyl transferase superfamily AS145_09940 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AS145_09945 PF00005 ABC transporter AS145_09950 PF01032 FecCD transport family AS145_09955 PF01032 FecCD transport family AS145_09960 PF00593 TonB dependent receptor AS145_09960 PF07715 TonB-dependent Receptor Plug Domain AS145_09975 PF11143 Protein of unknown function (DUF2919) AS145_09980 PF01544 CorA-like Mg2+ transporter protein AS145_09990 PF01012 Electron transfer flavoprotein domain AS145_09995 PF00766 Electron transfer flavoprotein FAD-binding domain AS145_09995 PF01012 Electron transfer flavoprotein domain AS145_10000 PF00266 Aminotransferase class-V AS145_10005 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AS145_10010 PF00793 DAHP synthetase I family AS145_10015 PF00672 HAMP domain AS145_10015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_10020 PF04055 Radical SAM superfamily AS145_10025 PF13742 OB-fold nucleic acid binding domain AS145_10025 PF02601 Exonuclease VII, large subunit AS145_10030 PF00892 EamA-like transporter family AS145_10035 PF02472 Biopolymer transport protein ExbD/TolR AS145_10040 PF01618 MotA/TolQ/ExbB proton channel family AS145_10050 PF02705 K+ potassium transporter AS145_10055 PF00478 IMP dehydrogenase / GMP reductase domain AS145_10055 PF00571 CBS domain AS145_10060 PF00958 GMP synthase C terminal domain AS145_10060 PF00117 Glutamine amidotransferase class-I AS145_10060 PF02540 NAD synthase AS145_10065 PF13356 Arm DNA-binding domain AS145_10065 PF00589 Phage integrase family AS145_10105 PF12833 Helix-turn-helix domain AS145_10105 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AS145_10105 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AS145_10105 PF02805 Metal binding domain of Ada AS145_10120 PF05724 Thiopurine S-methyltransferase (TPMT) AS145_10125 PF05193 Peptidase M16 inactive domain AS145_10125 PF00675 Insulinase (Peptidase family M16) AS145_10130 PF00300 Histidine phosphatase superfamily (branch 1) AS145_10140 PF00892 EamA-like transporter family AS145_10145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS145_10150 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AS145_10155 PF17757 UvrB interaction domain AS145_10155 PF02559 CarD-like/TRCF domain AS145_10155 PF00270 DEAD/DEAH box helicase AS145_10155 PF00271 Helicase conserved C-terminal domain AS145_10155 PF03461 TRCF domain AS145_10165 PF02687 FtsX-like permease family AS145_10165 PF12704 MacB-like periplasmic core domain AS145_10170 PF00005 ABC transporter AS145_10175 PF12704 MacB-like periplasmic core domain AS145_10175 PF02687 FtsX-like permease family AS145_10190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS145_10190 PF05698 Bacterial trigger factor protein (TF) C-terminus AS145_10190 PF05697 Bacterial trigger factor protein (TF) AS145_10195 PF00574 Clp protease AS145_10200 PF07724 AAA domain (Cdc48 subfamily) AS145_10200 PF10431 C-terminal, D2-small domain, of ClpB protein AS145_10200 PF06689 ClpX C4-type zinc finger AS145_10205 PF05362 Lon protease (S16) C-terminal proteolytic domain AS145_10205 PF00004 ATPase family associated with various cellular activities (AAA) AS145_10205 PF02190 ATP-dependent protease La (LON) substrate-binding domain AS145_10215 PF13145 PPIC-type PPIASE domain AS145_10220 PF00005 ABC transporter AS145_10220 PF12848 ABC transporter AS145_10225 PF00474 Sodium:solute symporter family AS145_10230 PF04341 Protein of unknown function, DUF485 AS145_10245 PF00378 Enoyl-CoA hydratase/isomerase AS145_10280 PF01235 Sodium:alanine symporter family AS145_10290 PF06167 Glucose-regulated metallo-peptidase M90 AS145_10295 PF01184 GPR1/FUN34/yaaH family AS145_10310 PF09278 MerR, DNA binding AS145_10310 PF00376 MerR family regulatory protein AS145_10315 PF00682 HMGL-like AS145_10320 PF00364 Biotin-requiring enzyme AS145_10320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS145_10320 PF02785 Biotin carboxylase C-terminal domain AS145_10320 PF00289 Biotin carboxylase, N-terminal domain AS145_10325 PF00378 Enoyl-CoA hydratase/isomerase AS145_10330 PF01039 Carboxyl transferase domain AS145_10335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS145_10335 PF02770 Acyl-CoA dehydrogenase, middle domain AS145_10335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS145_10340 PF00171 Aldehyde dehydrogenase family AS145_10345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS145_10345 PF02770 Acyl-CoA dehydrogenase, middle domain AS145_10345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS145_10350 PF00378 Enoyl-CoA hydratase/isomerase AS145_10355 PF00378 Enoyl-CoA hydratase/isomerase AS145_10360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS145_10360 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AS145_10370 PF13520 Amino acid permease AS145_10375 PF01925 Sulfite exporter TauE/SafE AS145_10395 PF08448 PAS fold AS145_10395 PF00563 EAL domain AS145_10395 PF00990 Diguanylate cyclase, GGDEF domain AS145_10400 PF04002 RadC-like JAB domain AS145_10410 PF00239 Resolvase, N terminal domain AS145_10410 PF02796 Helix-turn-helix domain of resolvase AS145_10420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_10420 PF03466 LysR substrate binding domain AS145_10425 PF12146 Serine aminopeptidase, S33 AS145_10430 PF00326 Prolyl oligopeptidase family AS145_10430 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AS145_10430 PF07676 WD40-like Beta Propeller Repeat AS145_10440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_10440 PF03466 LysR substrate binding domain AS145_10445 PF00248 Aldo/keto reductase family AS145_10455 PF00248 Aldo/keto reductase family AS145_10460 PF07694 5TMR of 5TMR-LYT AS145_10460 PF00990 Diguanylate cyclase, GGDEF domain AS145_10465 PF03466 LysR substrate binding domain AS145_10465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_10470 PF00232 Glycosyl hydrolase family 1 AS145_10475 PF00563 EAL domain AS145_10475 PF03707 Bacterial signalling protein N terminal repeat AS145_10475 PF00990 Diguanylate cyclase, GGDEF domain AS145_10475 PF13188 PAS domain AS145_10485 PF01966 HD domain AS145_10495 PF03466 LysR substrate binding domain AS145_10495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_10500 PF01261 Xylose isomerase-like TIM barrel AS145_10505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AS145_10505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AS145_10510 PF03466 LysR substrate binding domain AS145_10510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_10520 PF03279 Bacterial lipid A biosynthesis acyltransferase AS145_10525 PF03279 Bacterial lipid A biosynthesis acyltransferase AS145_10540 PF00990 Diguanylate cyclase, GGDEF domain AS145_10540 PF17151 Periplasmic sensor domain AS145_10550 PF00136 DNA polymerase family B AS145_10550 PF03104 DNA polymerase family B, exonuclease domain AS145_10580 PF01554 MatE AS145_10585 PF06786 Uncharacterised protein family (UPF0253) AS145_10590 PF00677 Lumazine binding domain AS145_10600 PF13419 Haloacid dehalogenase-like hydrolase AS145_10605 PF02222 ATP-grasp domain AS145_10605 PF01370 NAD dependent epimerase/dehydratase family AS145_10610 PF00892 EamA-like transporter family AS145_10615 PF02525 Flavodoxin-like fold AS145_10640 PF17783 CvfB-like winged helix domain AS145_10640 PF13509 S1 domain AS145_10650 PF04269 Protein of unknown function, DUF440 AS145_10655 PF00912 Transglycosylase AS145_10660 PF04269 Protein of unknown function, DUF440 AS145_10665 PF03776 Septum formation topological specificity factor MinE AS145_10670 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AS145_10675 PF05209 Septum formation inhibitor MinC, N-terminal domain AS145_10675 PF03775 Septum formation inhibitor MinC, C-terminal domain AS145_10680 PF05166 YcgL domain AS145_10685 PF13406 Transglycosylase SLT domain AS145_10690 PF03313 Serine dehydratase alpha chain AS145_10690 PF03315 Serine dehydratase beta chain AS145_10695 PF03313 Serine dehydratase alpha chain AS145_10695 PF03315 Serine dehydratase beta chain AS145_10700 PF06865 Pyrimidine/purine nucleoside phosphorylase AS145_10705 PF00375 Sodium:dicarboxylate symporter family AS145_10710 PF09278 MerR, DNA binding AS145_10710 PF00376 MerR family regulatory protein AS145_10715 PF00108 Thiolase, N-terminal domain AS145_10715 PF02803 Thiolase, C-terminal domain AS145_10720 PF00563 EAL domain AS145_10720 PF08668 HDOD domain AS145_10730 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AS145_10740 PF08281 Sigma-70, region 4 AS145_10740 PF04542 Sigma-70 region 2 AS145_10765 PF01882 Protein of unknown function DUF58 AS145_10770 PF17863 AAA lid domain AS145_10770 PF07726 ATPase family associated with various cellular activities (AAA) AS145_10775 PF02803 Thiolase, C-terminal domain AS145_10775 PF00108 Thiolase, N-terminal domain AS145_10780 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AS145_10780 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AS145_10780 PF00378 Enoyl-CoA hydratase/isomerase AS145_10785 PF07152 YaeQ protein AS145_10805 PF10123 Mu-like prophage I protein AS145_10815 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AS145_10815 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AS145_10820 PF00291 Pyridoxal-phosphate dependent enzyme AS145_10825 PF01546 Peptidase family M20/M25/M40 AS145_10825 PF07687 Peptidase dimerisation domain AS145_10830 PF01979 Amidohydrolase family AS145_10835 PF00696 Amino acid kinase family AS145_10840 PF00892 EamA-like transporter family AS145_10845 PF02625 XdhC and CoxI family AS145_10845 PF13478 XdhC Rossmann domain AS145_10855 PF12804 MobA-like NTP transferase domain AS145_10860 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AS145_10860 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS145_10865 PF01979 Amidohydrolase family AS145_10870 PF00941 FAD binding domain in molybdopterin dehydrogenase AS145_10875 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AS145_10875 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AS145_10875 PF01799 [2Fe-2S] binding domain AS145_10880 PF00860 Permease family AS145_10885 PF01979 Amidohydrolase family AS145_10890 PF00860 Permease family AS145_10895 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AS145_10895 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AS145_10900 PF00941 FAD binding domain in molybdopterin dehydrogenase AS145_10900 PF03450 CO dehydrogenase flavoprotein C-terminal domain AS145_10905 PF00111 2Fe-2S iron-sulfur cluster binding domain AS145_10905 PF01799 [2Fe-2S] binding domain AS145_10915 PF05433 Glycine zipper 2TM domain AS145_10925 PF03606 C4-dicarboxylate anaerobic carrier AS145_10930 PF00501 AMP-binding enzyme AS145_10930 PF13193 AMP-binding enzyme C-terminal domain AS145_10935 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AS145_10935 PF01502 Phosphoribosyl-AMP cyclohydrolase AS145_10940 PF00977 Histidine biosynthesis protein AS145_10945 PF00512 His Kinase A (phospho-acceptor) domain AS145_10945 PF01627 Hpt domain AS145_10945 PF00072 Response regulator receiver domain AS145_10945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_10955 PF00072 Response regulator receiver domain AS145_10960 PF00977 Histidine biosynthesis protein AS145_10965 PF00117 Glutamine amidotransferase class-I AS145_10970 PF08645 Polynucleotide kinase 3 phosphatase AS145_10970 PF00475 Imidazoleglycerol-phosphate dehydratase AS145_10975 PF00155 Aminotransferase class I and II AS145_10980 PF00815 Histidinol dehydrogenase AS145_10985 PF08029 HisG, C-terminal domain AS145_10985 PF01634 ATP phosphoribosyltransferase AS145_10995 PF13307 Helicase C-terminal domain AS145_10995 PF04851 Type III restriction enzyme, res subunit AS145_11000 PF00814 Glycoprotease family AS145_11010 PF12697 Alpha/beta hydrolase family AS145_11010 PF08241 Methyltransferase domain AS145_11015 PF00501 AMP-binding enzyme AS145_11015 PF13193 AMP-binding enzyme C-terminal domain AS145_11020 PF01612 3'-5' exonuclease AS145_11020 PF00570 HRDC domain AS145_11025 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS145_11120 PF02796 Helix-turn-helix domain of resolvase AS145_11120 PF00239 Resolvase, N terminal domain AS145_11130 PF07508 Recombinase AS145_11130 PF00239 Resolvase, N terminal domain AS145_11130 PF13408 Recombinase zinc beta ribbon domain AS145_11140 PF01207 Dihydrouridine synthase (Dus) AS145_11145 PF04304 Protein of unknown function (DUF454) AS145_11150 PF00156 Phosphoribosyl transferase domain AS145_11155 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AS145_11155 PF12169 DNA polymerase III subunits gamma and tau domain III AS145_11155 PF12170 DNA polymerase III tau subunit V interacting with alpha AS145_11160 PF02575 YbaB/EbfC DNA-binding family AS145_11165 PF12167 Arm DNA-binding domain AS145_11165 PF00589 Phage integrase family AS145_11195 PF06630 Enterobacterial exodeoxyribonuclease VIII AS145_11195 PF12684 PDDEXK-like domain of unknown function (DUF3799) AS145_11285 PF00199 Catalase AS145_11285 PF06628 Catalase-related immune-responsive AS145_11310 PF09669 Phage regulatory protein Rha (Phage_pRha) AS145_11310 PF03374 Phage antirepressor protein KilAC domain AS145_11315 PF05772 NinB protein AS145_11330 PF01338 Bacillus thuringiensis toxin AS145_11335 PF13438 Domain of unknown function (DUF4113) AS145_11335 PF00817 impB/mucB/samB family AS145_11335 PF11799 impB/mucB/samB family C-terminal domain AS145_11335 PF11798 IMS family HHH motif AS145_11340 PF00717 Peptidase S24-like AS145_11355 PF00816 H-NS histone family AS145_11505 PF00196 Bacterial regulatory proteins, luxR family AS145_11505 PF00072 Response regulator receiver domain AS145_11515 PF00271 Helicase conserved C-terminal domain AS145_11515 PF04408 Helicase associated domain (HA2) AS145_11515 PF00270 DEAD/DEAH box helicase AS145_11515 PF11898 Domain of unknown function (DUF3418) AS145_11515 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AS145_11530 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AS145_11530 PF01627 Hpt domain AS145_11530 PF00512 His Kinase A (phospho-acceptor) domain AS145_11530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_11530 PF00072 Response regulator receiver domain AS145_11530 PF00672 HAMP domain AS145_11535 PF00072 Response regulator receiver domain AS145_11540 PF00753 Metallo-beta-lactamase superfamily AS145_11550 PF02769 AIR synthase related protein, C-terminal domain AS145_11550 PF00586 AIR synthase related protein, N-terminal domain AS145_11570 PF10672 S-adenosylmethionine-dependent methyltransferase AS145_11570 PF17785 PUA-like domain AS145_11575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_11575 PF12729 Four helix bundle sensory module for signal transduction AS145_11575 PF00672 HAMP domain AS145_11580 PF00708 Acylphosphatase AS145_11585 PF02798 Glutathione S-transferase, N-terminal domain AS145_11585 PF00043 Glutathione S-transferase, C-terminal domain AS145_11590 PF08264 Anticodon-binding domain of tRNA AS145_11590 PF01588 Putative tRNA binding domain AS145_11590 PF09334 tRNA synthetases class I (M) AS145_11595 PF10609 NUBPL iron-transfer P-loop NTPase AS145_11600 PF00485 Phosphoribulokinase / Uridine kinase family AS145_11605 PF00692 dUTPase AS145_11610 PF01384 Phosphate transporter family AS145_11615 PF00575 S1 RNA binding domain AS145_11615 PF10150 Ribonuclease E/G family AS145_11615 PF12111 Polyribonucleotide phosphorylase C terminal AS145_11620 PF00849 RNA pseudouridylate synthase AS145_11620 PF01479 S4 domain AS145_11630 PF02545 Maf-like protein AS145_11635 PF07690 Major Facilitator Superfamily AS145_11640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_11640 PF03466 LysR substrate binding domain AS145_11650 PF02620 Large ribosomal RNA subunit accumulation protein YceD AS145_11655 PF01783 Ribosomal L32p protein family AS145_11660 PF02504 Fatty acid synthesis protein AS145_11665 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AS145_11665 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AS145_11670 PF00698 Acyl transferase domain AS145_11680 PF00550 Phosphopantetheine attachment site AS145_11685 PF00109 Beta-ketoacyl synthase, N-terminal domain AS145_11685 PF02801 Beta-ketoacyl synthase, C-terminal domain AS145_11690 PF01063 Amino-transferase class IV AS145_11695 PF02618 YceG-like family AS145_11700 PF02223 Thymidylate kinase AS145_11705 PF09115 DNA polymerase III, delta subunit, C terminal AS145_11710 PF01026 TatD related DNase AS145_11715 PF00589 Phage integrase family AS145_11725 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AS145_11725 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AS145_11725 PF01189 16S rRNA methyltransferase RsmB/F AS145_11730 PF02470 MlaD protein AS145_11735 PF04403 Paraquat-inducible protein A AS145_11750 PF00285 Citrate synthase, C-terminal domain AS145_11755 PF03972 MmgE/PrpD family AS145_11770 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AS145_11770 PF06974 Protein of unknown function (DUF1298) AS145_11795 PF00106 short chain dehydrogenase AS145_11805 PF07130 YebG protein AS145_11815 PF13654 AAA domain AS145_11815 PF05362 Lon protease (S16) C-terminal proteolytic domain AS145_11820 PF07977 FabA-like domain AS145_11830 PF00005 ABC transporter AS145_11830 PF16326 ABC transporter C-terminal domain AS145_11830 PF12848 ABC transporter AS145_11840 PF01170 Putative RNA methylase family UPF0020 AS145_11840 PF02926 THUMP domain AS145_11840 PF10672 S-adenosylmethionine-dependent methyltransferase AS145_11845 PF07126 Cell-division protein ZapC AS145_11850 PF01180 Dihydroorotate dehydrogenase AS145_11855 PF05088 Bacterial NAD-glutamate dehydrogenase AS145_11865 PF01433 Peptidase family M1 domain AS145_11865 PF11940 Domain of unknown function (DUF3458) Ig-like fold AS145_11865 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AS145_11870 PF03572 Peptidase family S41 AS145_11870 PF00595 PDZ domain AS145_11870 PF11818 C-terminal domain of tail specific protease (DUF3340) AS145_11870 PF17804 Tail specific protease N-terminal domain AS145_11875 PF04352 ProQ/FINO family AS145_11875 PF17516 ProQ C-terminal domain AS145_11880 PF13185 GAF domain AS145_11890 PF00115 Cytochrome C and Quinol oxidase polypeptide I AS145_11905 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AS145_11905 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AS145_11915 PF00403 Heavy-metal-associated domain AS145_11930 PF13545 Crp-like helix-turn-helix domain AS145_11930 PF00027 Cyclic nucleotide-binding domain AS145_11935 PF00582 Universal stress protein family AS145_11940 PF01171 PP-loop family AS145_11955 PF02798 Glutathione S-transferase, N-terminal domain AS145_11955 PF14497 Glutathione S-transferase, C-terminal domain AS145_11960 PF05025 RbsD / FucU transport protein family AS145_11965 PF00005 ABC transporter AS145_11970 PF02653 Branched-chain amino acid transport system / permease component AS145_11975 PF13407 Periplasmic binding protein domain AS145_11980 PF00294 pfkB family carbohydrate kinase AS145_11985 PF00356 Bacterial regulatory proteins, lacI family AS145_12000 PF02146 Sir2 family AS145_12015 PF09456 RcsC Alpha-Beta-Loop (ABL) AS145_12015 PF00512 His Kinase A (phospho-acceptor) domain AS145_12015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_12015 PF00072 Response regulator receiver domain AS145_12020 PF00216 Bacterial DNA-binding protein AS145_12025 PF03147 Ferredoxin-fold anticodon binding domain AS145_12025 PF03484 tRNA synthetase B5 domain AS145_12025 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AS145_12025 PF03483 B3/4 domain AS145_12025 PF01588 Putative tRNA binding domain AS145_12030 PF01409 tRNA synthetases class II core domain (F) AS145_12030 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AS145_12035 PF00453 Ribosomal protein L20 AS145_12040 PF01632 Ribosomal protein L35 AS145_12045 PF05198 Translation initiation factor IF-3, N-terminal domain AS145_12045 PF00707 Translation initiation factor IF-3, C-terminal domain AS145_12050 PF03129 Anticodon binding domain AS145_12050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS145_12050 PF02824 TGS domain AS145_12050 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AS145_12060 PF04055 Radical SAM superfamily AS145_12065 PF03989 DNA gyrase C-terminal domain, beta-propeller AS145_12065 PF00521 DNA gyrase/topoisomerase IV, subunit A AS145_12075 PF13419 Haloacid dehalogenase-like hydrolase AS145_12080 PF03477 ATP cone domain AS145_12080 PF02867 Ribonucleotide reductase, barrel domain AS145_12080 PF00317 Ribonucleotide reductase, all-alpha domain AS145_12085 PF00268 Ribonucleotide reductase, small chain AS145_12090 PF00111 2Fe-2S iron-sulfur cluster binding domain AS145_12095 PF03562 MltA specific insert domain AS145_12095 PF06725 3D domain AS145_12100 PF06945 Protein of unknown function (DUF1289) AS145_12110 PF03613 PTS system mannose/fructose/sorbose family IID component AS145_12115 PF03609 PTS system sorbose-specific iic component AS145_12120 PF03830 PTS system sorbose subfamily IIB component AS145_12120 PF03610 PTS system fructose IIA component AS145_12135 PF00356 Bacterial regulatory proteins, lacI family AS145_12135 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AS145_12140 PF06560 Glucose-6-phosphate isomerase (GPI) AS145_12145 PF02378 Phosphotransferase system, EIIC AS145_12145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS145_12150 PF00294 pfkB family carbohydrate kinase AS145_12155 PF00381 PTS HPr component phosphorylation site AS145_12155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS145_12160 PF00356 Bacterial regulatory proteins, lacI family AS145_12160 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AS145_12165 PF03222 Tryptophan/tyrosine permease family AS145_12180 PF00271 Helicase conserved C-terminal domain AS145_12180 PF00270 DEAD/DEAH box helicase AS145_12190 PF01264 Chorismate synthase AS145_12195 PF05175 Methyltransferase small domain AS145_12200 PF01713 Smr domain AS145_12210 PF08448 PAS fold AS145_12210 PF00990 Diguanylate cyclase, GGDEF domain AS145_12215 PF00300 Histidine phosphatase superfamily (branch 1) AS145_12240 PF08274 PhnA Zinc-Ribbon AS145_12240 PF03831 PhnA domain AS145_12255 PF02567 Phenazine biosynthesis-like protein AS145_12270 PF01327 Polypeptide deformylase AS145_12285 PF05036 Sporulation related domain AS145_12285 PF03330 Lytic transglycolase AS145_12290 PF16330 MukB hinge domain AS145_12290 PF04310 MukB N-terminal AS145_12295 PF04288 MukE-like family AS145_12300 PF03882 MukF winged-helix domain AS145_12300 PF17193 MukF C-terminal domain AS145_12300 PF17192 MukF middle domain AS145_12310 PF02698 DUF218 domain AS145_12315 PF00121 Triosephosphate isomerase AS145_12320 PF00365 Phosphofructokinase AS145_12325 PF07687 Peptidase dimerisation domain AS145_12325 PF01546 Peptidase family M20/M25/M40 AS145_12330 PF13419 Haloacid dehalogenase-like hydrolase AS145_12335 PF02789 Cytosol aminopeptidase family, N-terminal domain AS145_12335 PF00883 Cytosol aminopeptidase family, catalytic domain AS145_12380 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AS145_12380 PF00128 Alpha amylase, catalytic domain AS145_12390 PF11398 Protein of unknown function (DUF2813) AS145_12395 PF12833 Helix-turn-helix domain AS145_12395 PF14525 AraC-binding-like domain AS145_12405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_12405 PF03466 LysR substrate binding domain AS145_12410 PF01925 Sulfite exporter TauE/SafE AS145_12420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS145_12420 PF18029 Glyoxalase-like domain AS145_12425 PF01820 D-ala D-ala ligase N-terminus AS145_12425 PF07478 D-ala D-ala ligase C-terminus AS145_12435 PF00255 Glutathione peroxidase AS145_12440 PF00271 Helicase conserved C-terminal domain AS145_12440 PF00270 DEAD/DEAH box helicase AS145_12445 PF13673 Acetyltransferase (GNAT) domain AS145_12455 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AS145_12465 PF01928 CYTH domain AS145_12475 PF00583 Acetyltransferase (GNAT) family AS145_12480 PF00465 Iron-containing alcohol dehydrogenase AS145_12485 PF03992 Antibiotic biosynthesis monooxygenase AS145_12490 PF08543 Phosphomethylpyrimidine kinase AS145_12510 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AS145_12510 PF00561 alpha/beta hydrolase fold AS145_12515 PF01575 MaoC like domain AS145_12530 PF00664 ABC transporter transmembrane region AS145_12530 PF00005 ABC transporter AS145_12535 PF00664 ABC transporter transmembrane region AS145_12535 PF00005 ABC transporter AS145_12540 PF00672 HAMP domain AS145_12540 PF01627 Hpt domain AS145_12540 PF00512 His Kinase A (phospho-acceptor) domain AS145_12540 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AS145_12540 PF00072 Response regulator receiver domain AS145_12540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_12545 PF00085 Thioredoxin AS145_12550 PF00939 Sodium:sulfate symporter transmembrane region AS145_12555 PF00343 Carbohydrate phosphorylase AS145_12580 PF00425 chorismate binding enzyme AS145_12580 PF04715 Anthranilate synthase component I, N terminal region AS145_12585 PF00293 NUDIX domain AS145_12590 PF03222 Tryptophan/tyrosine permease family AS145_12595 PF00375 Sodium:dicarboxylate symporter family AS145_12600 PF00570 HRDC domain AS145_12600 PF16124 RecQ zinc-binding AS145_12600 PF00271 Helicase conserved C-terminal domain AS145_12600 PF00270 DEAD/DEAH box helicase AS145_12600 PF09382 RQC domain AS145_12605 PF08298 PrkA AAA domain AS145_12605 PF06798 PrkA serine protein kinase C-terminal domain AS145_12610 PF04285 Protein of unknown function (DUF444) AS145_12615 PF04293 SpoVR like protein AS145_12620 PF07840 FadR C-terminal domain AS145_12620 PF00392 Bacterial regulatory proteins, gntR family AS145_12625 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AS145_12630 PF02600 Disulfide bond formation protein DsbB AS145_12635 PF09335 SNARE associated Golgi protein AS145_12645 PF04851 Type III restriction enzyme, res subunit AS145_12645 PF00271 Helicase conserved C-terminal domain AS145_12645 PF02151 UvrB/uvrC motif AS145_12645 PF12344 Ultra-violet resistance protein B AS145_12645 PF17757 UvrB interaction domain AS145_12655 PF06826 Predicted Permease Membrane Region AS145_12655 PF02080 TrkA-C domain AS145_12660 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS145_12660 PF01464 Transglycosylase SLT domain AS145_12675 PF01970 Tripartite tricarboxylate transporter TctA family AS145_12680 PF12431 Transcriptional regulator AS145_12680 PF08279 HTH domain AS145_12680 PF00072 Response regulator receiver domain AS145_12685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_12685 PF00989 PAS fold AS145_12685 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AS145_12685 PF17203 Single cache domain 3 AS145_12690 PF00480 ROK family AS145_12690 PF01047 MarR family AS145_12695 PF17200 Single Cache domain 2 AS145_12695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_12695 PF00672 HAMP domain AS145_12700 PF02810 SEC-C motif AS145_12705 PF04324 BFD-like [2Fe-2S] binding domain AS145_12705 PF01266 FAD dependent oxidoreductase AS145_12710 PF00890 FAD binding domain AS145_12715 PF02754 Cysteine-rich domain AS145_12715 PF13183 4Fe-4S dicluster domain AS145_12730 PF02335 Cytochrome c552 AS145_12735 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) AS145_12735 PF13435 Cytochrome c554 and c-prime AS145_12740 PF00037 4Fe-4S binding domain AS145_12740 PF13247 4Fe-4S dicluster domain AS145_12745 PF03916 Polysulphide reductase, NrfD AS145_12750 PF01578 Cytochrome C assembly protein AS145_12750 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AS145_12755 PF08534 Redoxin AS145_12760 PF03918 Cytochrome C biogenesis protein AS145_12765 PF00293 NUDIX domain AS145_12770 PF00768 D-alanyl-D-alanine carboxypeptidase AS145_12775 PF01212 Beta-eliminating lyase AS145_12780 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AS145_12785 PF01266 FAD dependent oxidoreductase AS145_12795 PF07969 Amidohydrolase family AS145_12800 PF00571 CBS domain AS145_12800 PF00478 IMP dehydrogenase / GMP reductase domain AS145_12810 PF08267 Cobalamin-independent synthase, N-terminal domain AS145_12810 PF01717 Cobalamin-independent synthase, Catalytic domain AS145_12815 PF03466 LysR substrate binding domain AS145_12815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_12825 PF00593 TonB dependent receptor AS145_12825 PF07715 TonB-dependent Receptor Plug Domain AS145_12830 PF12833 Helix-turn-helix domain AS145_12835 PF00106 short chain dehydrogenase AS145_12840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_12840 PF03466 LysR substrate binding domain AS145_12845 PF13460 NAD(P)H-binding AS145_12855 PF01053 Cys/Met metabolism PLP-dependent enzyme AS145_12860 PF00675 Insulinase (Peptidase family M16) AS145_12860 PF05193 Peptidase M16 inactive domain AS145_12865 PF01118 Semialdehyde dehydrogenase, NAD binding domain AS145_12865 PF02774 Semialdehyde dehydrogenase, dimerisation domain AS145_12870 PF00893 Small Multidrug Resistance protein AS145_12875 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AS145_12875 PF18381 YcaO cyclodehydratase C-terminal domain AS145_12880 PF01226 Formate/nitrite transporter AS145_12885 PF02901 Pyruvate formate lyase-like AS145_12885 PF01228 Glycine radical AS145_12895 PF00202 Aminotransferase class-III AS145_12900 PF00266 Aminotransferase class-V AS145_12905 PF00392 Bacterial regulatory proteins, gntR family AS145_12905 PF07702 UTRA domain AS145_12915 PF00005 ABC transporter AS145_12920 PF00528 Binding-protein-dependent transport system inner membrane component AS145_12925 PF01266 FAD dependent oxidoreductase AS145_12930 PF03692 Putative zinc- or iron-chelating domain AS145_12940 PF02629 CoA binding domain AS145_12940 PF00549 CoA-ligase AS145_12945 PF08442 ATP-grasp domain AS145_12945 PF00549 CoA-ligase AS145_12950 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS145_12950 PF00364 Biotin-requiring enzyme AS145_12950 PF02817 e3 binding domain AS145_12955 PF02779 Transketolase, pyrimidine binding domain AS145_12955 PF16870 2-oxoglutarate dehydrogenase C-terminal AS145_12955 PF00676 Dehydrogenase E1 component AS145_12955 PF16078 2-oxoglutarate dehydrogenase N-terminus AS145_12960 PF13085 2Fe-2S iron-sulfur cluster binding domain AS145_12965 PF02910 Fumarate reductase flavoprotein C-term AS145_12965 PF00890 FAD binding domain AS145_12970 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AS145_12975 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AS145_12980 PF00285 Citrate synthase, C-terminal domain AS145_12995 PF00109 Beta-ketoacyl synthase, N-terminal domain AS145_12995 PF02801 Beta-ketoacyl synthase, C-terminal domain AS145_13000 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AS145_13000 PF01266 FAD dependent oxidoreductase AS145_13010 PF03606 C4-dicarboxylate anaerobic carrier AS145_13025 PF01863 Protein of unknown function DUF45 AS145_13040 PF01197 Ribosomal protein L31 AS145_13045 PF00444 Ribosomal protein L36 AS145_13050 PF02678 Pirin AS145_13050 PF05726 Pirin C-terminal cupin domain AS145_13055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_13055 PF03466 LysR substrate binding domain AS145_13060 PF12833 Helix-turn-helix domain AS145_13060 PF02311 AraC-like ligand binding domain AS145_13065 PF02653 Branched-chain amino acid transport system / permease component AS145_13070 PF00005 ABC transporter AS145_13075 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AS145_13080 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS145_13085 PF00596 Class II Aldolase and Adducin N-terminal domain AS145_13090 PF11762 L-arabinose isomerase C-terminal domain AS145_13090 PF02610 L-arabinose isomerase AS145_13095 PF08411 Exonuclease C-terminal AS145_13095 PF00929 Exonuclease AS145_13110 PF03788 LrgA family AS145_13115 PF04172 LrgB-like family AS145_13120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AS145_13120 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AS145_13125 PF00501 AMP-binding enzyme AS145_13130 PF08891 YfcL protein AS145_13140 PF03741 Integral membrane protein TerC family AS145_13145 PF00691 OmpA family AS145_13150 PF00990 Diguanylate cyclase, GGDEF domain AS145_13150 PF17152 Periplasmic sensor domain AS145_13155 PF13689 YfiR/HmsC-like AS145_13160 PF00158 Sigma-54 interaction domain AS145_13160 PF18024 Helix-turn-helix domain AS145_13165 PF01329 Pterin 4 alpha carbinolamine dehydratase AS145_13170 PF01329 Pterin 4 alpha carbinolamine dehydratase AS145_13175 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AS145_13180 PF05128 Domain of unknown function (DUF697) AS145_13185 PF04317 YcjX-like family, DUF463 AS145_13195 PF06667 Phage shock protein B AS145_13200 PF04012 PspA/IM30 family AS145_13205 PF02954 Bacterial regulatory protein, Fis family AS145_13205 PF00158 Sigma-54 interaction domain AS145_13210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS145_13215 PF00528 Binding-protein-dependent transport system inner membrane component AS145_13220 PF00528 Binding-protein-dependent transport system inner membrane component AS145_13220 PF12911 N-terminal TM domain of oligopeptide transport permease C AS145_13225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS145_13225 PF00005 ABC transporter AS145_13230 PF00005 ABC transporter AS145_13235 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AS145_13240 PF00156 Phosphoribosyl transferase domain AS145_13245 PF02674 Colicin V production protein AS145_13250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS145_13250 PF02403 Seryl-tRNA synthetase N-terminal domain AS145_13260 PF12002 MgsA AAA+ ATPase C terminal AS145_13260 PF00004 ATPase family associated with various cellular activities (AAA) AS145_13260 PF16193 AAA C-terminal domain AS145_13265 PF03548 Outer membrane lipoprotein carrier protein LolA AS145_13270 PF01580 FtsK/SpoIIIE family AS145_13270 PF17854 FtsK alpha domain AS145_13270 PF09397 Ftsk gamma domain AS145_13270 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AS145_13275 PF01037 Lrp/AsnC ligand binding domain AS145_13280 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS145_13285 PF00990 Diguanylate cyclase, GGDEF domain AS145_13285 PF17158 Membrane-associated sensor, integral membrane domain AS145_13290 PF05433 Glycine zipper 2TM domain AS145_13295 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AS145_13300 PF04377 Arginine-tRNA-protein transferase, C terminus AS145_13300 PF04376 Arginine-tRNA-protein transferase, N terminus AS145_13305 PF01176 Translation initiation factor 1A / IF-1 AS145_13310 PF00004 ATPase family associated with various cellular activities (AAA) AS145_13310 PF07724 AAA domain (Cdc48 subfamily) AS145_13310 PF10431 C-terminal, D2-small domain, of ClpB protein AS145_13310 PF17871 AAA lid domain AS145_13310 PF02861 Clp amino terminal domain, pathogenicity island component AS145_13315 PF02617 ATP-dependent Clp protease adaptor protein ClpS AS145_13320 PF00313 'Cold-shock' DNA-binding domain AS145_13325 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AS145_13325 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AS145_13355 PF04717 Type VI secretion system, phage-baseplate injector AS145_13385 PF00158 Sigma-54 interaction domain AS145_13385 PF02954 Bacterial regulatory protein, Fis family AS145_13385 PF06505 Activator of aromatic catabolism AS145_13385 PF02830 V4R domain AS145_13390 PF07724 AAA domain (Cdc48 subfamily) AS145_13390 PF10431 C-terminal, D2-small domain, of ClpB protein AS145_13390 PF00004 ATPase family associated with various cellular activities (AAA) AS145_13390 PF17871 AAA lid domain AS145_13460 PF04717 Type VI secretion system, phage-baseplate injector AS145_13465 PF05638 Type VI secretion system effector, Hcp AS145_13475 PF10722 Putative bacterial sensory transduction regulator AS145_13485 PF00265 Thymidine kinase AS145_13490 PF03553 Na+/H+ antiporter family AS145_13495 PF00816 H-NS histone family AS145_13500 PF01923 Cobalamin adenosyltransferase AS145_13505 PF12843 Putative quorum-sensing-regulated virulence factor AS145_13510 PF04055 Radical SAM superfamily AS145_13515 PF06508 Queuosine biosynthesis protein QueC AS145_13530 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AS145_13535 PF18073 Rubredoxin metal binding domain AS145_13545 PF00216 Bacterial DNA-binding protein AS145_13550 PF00575 S1 RNA binding domain AS145_13555 PF02224 Cytidylate kinase AS145_13560 PF00925 GTP cyclohydrolase II AS145_13565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_13565 PF03466 LysR substrate binding domain AS145_13570 PF03466 LysR substrate binding domain AS145_13570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_13575 PF07690 Major Facilitator Superfamily AS145_13590 PF00881 Nitroreductase family AS145_13595 PF13188 PAS domain AS145_13595 PF00990 Diguanylate cyclase, GGDEF domain AS145_13595 PF00563 EAL domain AS145_13595 PF03707 Bacterial signalling protein N terminal repeat AS145_13605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_13605 PF03466 LysR substrate binding domain AS145_13610 PF00072 Response regulator receiver domain AS145_13620 PF01212 Beta-eliminating lyase AS145_13635 PF00248 Aldo/keto reductase family AS145_13640 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AS145_13650 PF03411 Penicillin-insensitive murein endopeptidase AS145_13660 PF04536 TPM domain AS145_13675 PF01618 MotA/TolQ/ExbB proton channel family AS145_13680 PF13677 Membrane MotB of proton-channel complex MotA/MotB AS145_13680 PF00691 OmpA family AS145_13685 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AS145_13690 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AS145_13695 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AS145_13695 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AS145_13705 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AS145_13705 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AS145_13710 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS145_13710 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AS145_13710 PF00384 Molybdopterin oxidoreductase AS145_13715 PF00146 NADH dehydrogenase AS145_13720 PF12838 4Fe-4S dicluster domain AS145_13725 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AS145_13730 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AS145_13735 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AS145_13735 PF00361 Proton-conducting membrane transporter AS145_13740 PF00361 Proton-conducting membrane transporter AS145_13745 PF00361 Proton-conducting membrane transporter AS145_13755 PF02769 AIR synthase related protein, C-terminal domain AS145_13755 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AS145_13755 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AS145_13760 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS145_13760 PF01464 Transglycosylase SLT domain AS145_13765 PF07191 zinc-ribbons AS145_13770 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AS145_13770 PF01926 50S ribosome-binding GTPase AS145_13775 PF13360 PQQ-like domain AS145_13780 PF09976 Tetratricopeptide repeat-like domain AS145_13785 PF03129 Anticodon binding domain AS145_13785 PF13393 Histidyl-tRNA synthetase AS145_13790 PF04551 GcpE protein AS145_13795 PF13464 Domain of unknown function (DUF4115) AS145_13805 PF04055 Radical SAM superfamily AS145_13810 PF00334 Nucleoside diphosphate kinase AS145_13815 PF00883 Cytosol aminopeptidase family, catalytic domain AS145_13815 PF12404 Peptidase AS145_13820 PF12404 Peptidase AS145_13820 PF00883 Cytosol aminopeptidase family, catalytic domain AS145_13825 PF00111 2Fe-2S iron-sulfur cluster binding domain AS145_13830 PF00012 Hsp70 protein AS145_13835 PF07743 HSCB C-terminal oligomerisation domain AS145_13840 PF01521 Iron-sulphur cluster biosynthesis AS145_13845 PF01592 NifU-like N terminal domain AS145_13850 PF00266 Aminotransferase class-V AS145_13855 PF02082 Transcriptional regulator AS145_13860 PF00588 SpoU rRNA Methylase family AS145_13885 PF07719 Tetratricopeptide repeat AS145_13885 PF13181 Tetratricopeptide repeat AS145_13895 PF07549 SecD/SecF GG Motif AS145_13895 PF02355 Protein export membrane protein AS145_13900 PF13721 SecD export protein N-terminal TM region AS145_13900 PF07549 SecD/SecF GG Motif AS145_13900 PF02355 Protein export membrane protein AS145_13905 PF02699 Preprotein translocase subunit AS145_13910 PF01702 Queuine tRNA-ribosyltransferase AS145_13915 PF02547 Queuosine biosynthesis protein AS145_13920 PF00571 CBS domain AS145_13925 PF10417 C-terminal domain of 1-Cys peroxiredoxin AS145_13925 PF00578 AhpC/TSA family AS145_13930 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS145_13930 PF13192 Thioredoxin domain AS145_13935 PF07690 Major Facilitator Superfamily AS145_13945 PF08241 Methyltransferase domain AS145_13950 PF03960 ArsC family AS145_13955 PF01758 Sodium Bile acid symporter family AS145_13960 PF01022 Bacterial regulatory protein, arsR family AS145_13965 PF02347 Glycine cleavage system P-protein AS145_13970 PF01597 Glycine cleavage H-protein AS145_13975 PF08669 Glycine cleavage T-protein C-terminal barrel domain AS145_13975 PF01571 Aminomethyltransferase folate-binding domain AS145_13980 PF01494 FAD binding domain AS145_13985 PF01494 FAD binding domain AS145_13990 PF03695 Uncharacterised protein family (UPF0149) AS145_13995 PF05164 Cell division protein ZapA AS145_14000 PF07690 Major Facilitator Superfamily AS145_14005 PF00043 Glutathione S-transferase, C-terminal domain AS145_14005 PF02798 Glutathione S-transferase, N-terminal domain AS145_14015 PF00459 Inositol monophosphatase family AS145_14020 PF00672 HAMP domain AS145_14020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_14025 PF02535 ZIP Zinc transporter AS145_14035 PF01048 Phosphorylase superfamily AS145_14045 PF01497 Periplasmic binding protein AS145_14050 PF02719 Polysaccharide biosynthesis protein AS145_14055 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AS145_14070 PF00202 Aminotransferase class-III AS145_14085 PF03102 NeuB family AS145_14085 PF08666 SAF domain AS145_14105 PF02561 Flagellar protein FliS AS145_14110 PF02465 Flagellar hook-associated protein 2 N-terminus AS145_14110 PF07196 Flagellin hook IN motif AS145_14110 PF07195 Flagellar hook-associated protein 2 C-terminus AS145_14120 PF00700 Bacterial flagellin C-terminal helical region AS145_14120 PF07196 Flagellin hook IN motif AS145_14120 PF00669 Bacterial flagellin N-terminal helical region AS145_14125 PF01527 Transposase AS145_14135 PF07196 Flagellin hook IN motif AS145_14135 PF00700 Bacterial flagellin C-terminal helical region AS145_14135 PF00669 Bacterial flagellin N-terminal helical region AS145_14140 PF00700 Bacterial flagellin C-terminal helical region AS145_14140 PF00669 Bacterial flagellin N-terminal helical region AS145_14140 PF07196 Flagellin hook IN motif AS145_14145 PF03458 UPF0126 domain AS145_14155 PF02568 Thiamine biosynthesis protein (ThiI) AS145_14155 PF02926 THUMP domain AS145_14165 PF06832 Penicillin-Binding Protein C-terminus Family AS145_14165 PF00912 Transglycosylase AS145_14165 PF00905 Penicillin binding protein transpeptidase domain AS145_14170 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AS145_14170 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AS145_14170 PF00207 Alpha-2-macroglobulin family AS145_14170 PF07678 A-macroglobulin TED domain AS145_14170 PF07703 Alpha-2-macroglobulin bait region domain AS145_14170 PF17962 Bacterial macroglobulin domain 6 AS145_14170 PF01835 MG2 domain AS145_14170 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AS145_14170 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AS145_14175 PF01546 Peptidase family M20/M25/M40 AS145_14175 PF07687 Peptidase dimerisation domain AS145_14180 PF01594 AI-2E family transporter AS145_14185 PF02321 Outer membrane efflux protein AS145_14190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS145_14190 PF00529 HlyD membrane-fusion protein of T1SS AS145_14205 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS145_14205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS145_14210 PF00990 Diguanylate cyclase, GGDEF domain AS145_14210 PF03707 Bacterial signalling protein N terminal repeat AS145_14210 PF00563 EAL domain AS145_14215 PF04055 Radical SAM superfamily AS145_14225 PF00528 Binding-protein-dependent transport system inner membrane component AS145_14230 PF00528 Binding-protein-dependent transport system inner membrane component AS145_14235 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS145_14240 PF00005 ABC transporter AS145_14245 PF03956 Lysine exporter LysO AS145_14250 PF01979 Amidohydrolase family AS145_14255 PF04336 Acyl carrier protein phosphodiesterase AS145_14270 PF03960 ArsC family AS145_14275 PF00578 AhpC/TSA family AS145_14280 PF13181 Tetratricopeptide repeat AS145_14280 PF01435 Peptidase family M48 AS145_14285 PF01206 Sulfurtransferase TusA AS145_14290 PF01594 AI-2E family transporter AS145_14300 PF00561 alpha/beta hydrolase fold AS145_14305 PF03976 Polyphosphate kinase 2 (PPK2) AS145_14310 PF08402 TOBE domain AS145_14310 PF00005 ABC transporter AS145_14315 PF00528 Binding-protein-dependent transport system inner membrane component AS145_14320 PF14785 Maltose transport system permease protein MalF P2 domain AS145_14320 PF00528 Binding-protein-dependent transport system inner membrane component AS145_14325 PF01547 Bacterial extracellular solute-binding protein AS145_14330 PF04245 37-kD nucleoid-associated bacterial protein AS145_14335 PF07208 Protein of unknown function (DUF1414) AS145_14340 PF11893 Domain of unknown function (DUF3413) AS145_14340 PF00884 Sulfatase AS145_14345 PF00593 TonB dependent receptor AS145_14345 PF07715 TonB-dependent Receptor Plug Domain AS145_14350 PF00326 Prolyl oligopeptidase family AS145_14350 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AS145_14370 PF03974 Ecotin AS145_14375 PF04219 Protein of unknown function, DUF AS145_14380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_14380 PF03466 LysR substrate binding domain AS145_14385 PF02153 Prephenate dehydrogenase AS145_14385 PF01817 Chorismate mutase type II AS145_14390 PF00793 DAHP synthetase I family AS145_14395 PF03009 Glycerophosphoryl diester phosphodiesterase family AS145_14400 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AS145_14400 PF01266 FAD dependent oxidoreductase AS145_14405 PF00455 DeoR C terminal sensor domain AS145_14405 PF08220 DeoR-like helix-turn-helix domain AS145_14410 PF07690 Major Facilitator Superfamily AS145_14415 PF00230 Major intrinsic protein AS145_14420 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS145_14420 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AS145_14425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_14425 PF03466 LysR substrate binding domain AS145_14445 PF00248 Aldo/keto reductase family AS145_14450 PF07690 Major Facilitator Superfamily AS145_14460 PF02322 Cytochrome bd terminal oxidase subunit II AS145_14465 PF01654 Cytochrome bd terminal oxidase subunit I AS145_14470 PF00392 Bacterial regulatory proteins, gntR family AS145_14470 PF00155 Aminotransferase class I and II AS145_14480 PF04391 Protein of unknown function (DUF533) AS145_14500 PF07690 Major Facilitator Superfamily AS145_14505 PF03466 LysR substrate binding domain AS145_14505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_14515 PF07690 Major Facilitator Superfamily AS145_14520 PF00849 RNA pseudouridylate synthase AS145_14520 PF01479 S4 domain AS145_14525 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS145_14525 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AS145_14545 PF04851 Type III restriction enzyme, res subunit AS145_14545 PF00271 Helicase conserved C-terminal domain AS145_14550 PF00300 Histidine phosphatase superfamily (branch 1) AS145_14555 PF08348 YheO-like PAS domain AS145_14555 PF13309 HTH domain AS145_14560 PF03313 Serine dehydratase alpha chain AS145_14565 PF01042 Endoribonuclease L-PSP AS145_14575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_14575 PF00672 HAMP domain AS145_14590 PF17944 Arginine decarboxylase C-terminal helical extension AS145_14590 PF17810 Arginine decarboxylase helical bundle domain AS145_14590 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AS145_14595 PF07687 Peptidase dimerisation domain AS145_14595 PF01546 Peptidase family M20/M25/M40 AS145_14620 PF04264 YceI-like domain AS145_14625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_14625 PF03466 LysR substrate binding domain AS145_14635 PF01268 Formate--tetrahydrofolate ligase AS145_14640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_14640 PF00672 HAMP domain AS145_14640 PF17200 Single Cache domain 2 AS145_14645 PF01227 GTP cyclohydrolase I AS145_14650 PF00994 Probable molybdopterin binding domain AS145_14650 PF03454 MoeA C-terminal region (domain IV) AS145_14650 PF03453 MoeA N-terminal region (domain I and II) AS145_14655 PF00899 ThiF family AS145_14660 PF00561 alpha/beta hydrolase fold AS145_14665 PF03459 TOBE domain AS145_14665 PF00005 ABC transporter AS145_14670 PF00528 Binding-protein-dependent transport system inner membrane component AS145_14680 PF02391 MoaE protein AS145_14685 PF02597 ThiS family AS145_14690 PF01967 MoaC family AS145_14695 PF00994 Probable molybdopterin binding domain AS145_14700 PF03264 NapC/NirT cytochrome c family, N-terminal region AS145_14705 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AS145_14710 PF12801 4Fe-4S binding domain AS145_14710 PF13237 4Fe-4S dicluster domain AS145_14715 PF12800 4Fe-4S binding domain AS145_14715 PF12838 4Fe-4S dicluster domain AS145_14720 PF10518 TAT (twin-arginine translocation) pathway signal sequence AS145_14720 PF01568 Molydopterin dinucleotide binding domain AS145_14720 PF00384 Molybdopterin oxidoreductase AS145_14720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS145_14730 PF00037 4Fe-4S binding domain AS145_14730 PF12800 4Fe-4S binding domain AS145_14730 PF13187 4Fe-4S dicluster domain AS145_14735 PF04055 Radical SAM superfamily AS145_14735 PF06463 Molybdenum Cofactor Synthesis C AS145_14740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_14740 PF00672 HAMP domain AS145_14740 PF07730 Histidine kinase AS145_14740 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AS145_14745 PF00196 Bacterial regulatory proteins, luxR family AS145_14745 PF00072 Response regulator receiver domain AS145_14755 PF01627 Hpt domain AS145_14755 PF17149 Periplasmic sensor domain found in signal transduction proteins AS145_14755 PF00072 Response regulator receiver domain AS145_14755 PF00512 His Kinase A (phospho-acceptor) domain AS145_14755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_14755 PF00672 HAMP domain AS145_14765 PF01933 Uncharacterised protein family UPF0052 AS145_14775 PF13230 Glutamine amidotransferases class-II AS145_14780 PF13580 SIS domain AS145_14785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS145_14785 PF02770 Acyl-CoA dehydrogenase, middle domain AS145_14785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS145_14785 PF09317 Domain of unknown function (DUF1974) AS145_14790 PF11849 Domain of unknown function (DUF3369) AS145_14800 PF00929 Exonuclease AS145_14805 PF00075 RNase H AS145_14810 PF08241 Methyltransferase domain AS145_14815 PF00753 Metallo-beta-lactamase superfamily AS145_14815 PF16123 Hydroxyacylglutathione hydrolase C-terminus AS145_14820 PF01476 LysM domain AS145_14820 PF01464 Transglycosylase SLT domain AS145_14825 PF03372 Endonuclease/Exonuclease/phosphatase family AS145_14835 PF03061 Thioesterase superfamily AS145_14845 PF00356 Bacterial regulatory proteins, lacI family AS145_14850 PF01464 Transglycosylase SLT domain AS145_14850 PF14718 Soluble lytic murein transglycosylase L domain AS145_14855 PF03707 Bacterial signalling protein N terminal repeat AS145_14855 PF00990 Diguanylate cyclase, GGDEF domain AS145_14855 PF00563 EAL domain AS145_14860 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AS145_14880 PF04357 TamB, inner membrane protein subunit of TAM complex AS145_14885 PF01103 Surface antigen AS145_14885 PF07244 Surface antigen variable number repeat AS145_14885 PF17243 POTRA domain TamA domain 1 AS145_14900 PF01625 Peptide methionine sulfoxide reductase AS145_14910 PF02627 Carboxymuconolactone decarboxylase family AS145_14915 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS145_14915 PF00403 Heavy-metal-associated domain AS145_14915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS145_14920 PF13416 Bacterial extracellular solute-binding protein AS145_14930 PF00005 ABC transporter AS145_14935 PF01066 CDP-alcohol phosphatidyltransferase AS145_14940 PF13406 Transglycosylase SLT domain AS145_14945 PF01047 MarR family AS145_14955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AS145_14955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AS145_14955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AS145_14955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AS145_14960 PF17206 SeqA protein N-terminal domain AS145_14960 PF03925 SeqA protein C-terminal domain AS145_14965 PF12697 Alpha/beta hydrolase family AS145_14975 PF01402 Ribbon-helix-helix protein, copG family AS145_14980 PF00258 Flavodoxin AS145_14990 PF01475 Ferric uptake regulator family AS145_14995 PF00749 tRNA synthetases class I (E and Q), catalytic domain AS145_14995 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AS145_15000 PF03173 Putative carbohydrate binding domain AS145_15000 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain AS145_15000 PF02838 Glycosyl hydrolase family 20, domain 2 AS145_15000 PF00728 Glycosyl hydrolase family 20, catalytic domain AS145_15005 PF00367 phosphotransferase system, EIIB AS145_15005 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AS145_15005 PF02378 Phosphotransferase system, EIIC AS145_15010 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AS145_15015 PF01979 Amidohydrolase family AS145_15020 PF00480 ROK family AS145_15020 PF01047 MarR family AS145_15025 PF00884 Sulfatase AS145_15025 PF08019 Phosphoethanolamine transferase EptA/EptB AS145_15030 PF01709 Transcriptional regulator AS145_15035 PF02938 GAD domain AS145_15035 PF01336 OB-fold nucleic acid binding domain AS145_15035 PF00152 tRNA synthetases class II (D, K and N) AS145_15040 PF01904 Protein of unknown function DUF72 AS145_15045 PF13649 Methyltransferase domain AS145_15050 PF08003 Protein of unknown function (DUF1698) AS145_15070 PF00578 AhpC/TSA family AS145_15070 PF10417 C-terminal domain of 1-Cys peroxiredoxin AS145_15075 PF03466 LysR substrate binding domain AS145_15075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_15080 PF12563 Hemolytic toxin N terminal AS145_15080 PF07968 Leukocidin/Hemolysin toxin family AS145_15085 PF00877 NlpC/P60 family AS145_15095 PF00171 Aldehyde dehydrogenase family AS145_15100 PF08359 YsiA-like protein, C-terminal region AS145_15100 PF00440 Bacterial regulatory proteins, tetR family AS145_15110 PF00465 Iron-containing alcohol dehydrogenase AS145_15120 PF00291 Pyridoxal-phosphate dependent enzyme AS145_15140 PF01554 MatE AS145_15160 PF01804 Penicillin amidase AS145_15165 PF10371 Domain of unknown function AS145_15165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS145_15165 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AS145_15165 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AS145_15165 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AS145_15170 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AS145_15170 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AS145_15170 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS145_15175 PF00111 2Fe-2S iron-sulfur cluster binding domain AS145_15175 PF03473 MOSC domain AS145_15175 PF03476 MOSC N-terminal beta barrel domain AS145_15175 PF00111 2Fe-2S iron-sulfur cluster binding domain AS145_15175 PF03476 MOSC N-terminal beta barrel domain AS145_15175 PF03473 MOSC domain AS145_15180 PF13426 PAS domain AS145_15180 PF08447 PAS fold AS145_15180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_15185 PF01435 Peptidase family M48 AS145_15195 PF12697 Alpha/beta hydrolase family AS145_15195 PF08241 Methyltransferase domain AS145_15200 PF00155 Aminotransferase class I and II AS145_15205 PF06968 Biotin and Thiamin Synthesis associated domain AS145_15205 PF04055 Radical SAM superfamily AS145_15225 PF00152 tRNA synthetases class II (D, K and N) AS145_15225 PF01336 OB-fold nucleic acid binding domain AS145_15230 PF03605 Anaerobic c4-dicarboxylate membrane transporter AS145_15240 PF07687 Peptidase dimerisation domain AS145_15240 PF01546 Peptidase family M20/M25/M40 AS145_15245 PF03606 C4-dicarboxylate anaerobic carrier AS145_15255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_15255 PF03466 LysR substrate binding domain AS145_15260 PF03960 ArsC family AS145_15265 PF07687 Peptidase dimerisation domain AS145_15265 PF01546 Peptidase family M20/M25/M40 AS145_15270 PF02557 D-alanyl-D-alanine carboxypeptidase AS145_15275 PF02080 TrkA-C domain AS145_15275 PF00999 Sodium/hydrogen exchanger family AS145_15275 PF03471 Transporter associated domain AS145_15285 PF00999 Sodium/hydrogen exchanger family AS145_15285 PF02080 TrkA-C domain AS145_15285 PF03471 Transporter associated domain AS145_15295 PF01810 LysE type translocator AS145_15300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_15300 PF00672 HAMP domain AS145_15305 PF07509 Protein of unknown function (DUF1523) AS145_15320 PF01156 Inosine-uridine preferring nucleoside hydrolase AS145_15325 PF00849 RNA pseudouridylate synthase AS145_15330 PF01048 Phosphorylase superfamily AS145_15335 PF00465 Iron-containing alcohol dehydrogenase AS145_15370 PF00437 Type II/IV secretion system protein AS145_15385 PF00263 Bacterial type II and III secretion system protein AS145_15385 PF13629 Pilus formation protein N terminal region AS145_15385 PF04972 BON domain AS145_15415 PF04355 SmpA / OmlA family AS145_15420 PF13460 NAD(P)H-binding AS145_15430 PF03364 Polyketide cyclase / dehydrase and lipid transport AS145_15435 PF01668 SmpB protein AS145_15440 PF00271 Helicase conserved C-terminal domain AS145_15440 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AS145_15440 PF08463 EcoEI R protein C-terminal AS145_15440 PF04851 Type III restriction enzyme, res subunit AS145_15515 PF10124 Mu-like prophage major head subunit gpT AS145_15520 PF10123 Mu-like prophage I protein AS145_15540 PF06074 Protein of unknown function (DUF935) AS145_15545 PF03237 Terminase-like family AS145_15550 PF11985 Protein of unknown function (DUF3486) AS145_15555 PF08461 Ribonuclease R winged-helix domain AS145_15590 PF08765 Mor transcription activator family AS145_15655 PF00271 Helicase conserved C-terminal domain AS145_15655 PF08463 EcoEI R protein C-terminal AS145_15655 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AS145_15655 PF04851 Type III restriction enzyme, res subunit AS145_15660 PF12161 HsdM N-terminal domain AS145_15660 PF02384 N-6 DNA Methylase AS145_15665 PF01420 Type I restriction modification DNA specificity domain AS145_15695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_15695 PF03466 LysR substrate binding domain AS145_15700 PF02447 GntP family permease AS145_15705 PF00291 Pyridoxal-phosphate dependent enzyme AS145_15710 PF00180 Isocitrate/isopropylmalate dehydrogenase AS145_15715 PF12833 Helix-turn-helix domain AS145_15720 PF01238 Phosphomannose isomerase type I AS145_15740 PF00155 Aminotransferase class I and II AS145_15745 PF00367 phosphotransferase system, EIIB AS145_15745 PF02378 Phosphotransferase system, EIIC AS145_15750 PF00356 Bacterial regulatory proteins, lacI family AS145_15750 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AS145_15765 PF00583 Acetyltransferase (GNAT) family AS145_15785 PF02378 Phosphotransferase system, EIIC AS145_15785 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS145_15785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS145_15790 PF07690 Major Facilitator Superfamily AS145_15795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS145_15805 PF00849 RNA pseudouridylate synthase AS145_15810 PF00293 NUDIX domain AS145_15820 PF04356 Protein of unknown function (DUF489) AS145_15825 PF08328 Adenylosuccinate lyase C-terminal AS145_15825 PF00206 Lyase AS145_15830 PF08007 Cupin superfamily protein AS145_15840 PF13508 Acetyltransferase (GNAT) domain AS145_15850 PF02798 Glutathione S-transferase, N-terminal domain AS145_15855 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AS145_15855 PF01243 Pyridoxamine 5'-phosphate oxidase AS145_15870 PF01029 NusB family AS145_15870 PF01189 16S rRNA methyltransferase RsmB/F AS145_15875 PF00462 Glutaredoxin AS145_15880 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AS145_15880 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AS145_15885 PF04333 MlaA lipoprotein AS145_15890 PF03918 Cytochrome C biogenesis protein AS145_15895 PF03918 Cytochrome C biogenesis protein AS145_15900 PF08534 Redoxin AS145_15905 PF01578 Cytochrome C assembly protein AS145_15905 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AS145_15910 PF03100 CcmE AS145_15915 PF04995 Heme exporter protein D (CcmD) AS145_15920 PF01578 Cytochrome C assembly protein AS145_15925 PF03379 CcmB protein AS145_15930 PF00005 ABC transporter AS145_15940 PF01584 CheW-like domain AS145_15950 PF13614 AAA domain AS145_15955 PF13677 Membrane MotB of proton-channel complex MotA/MotB AS145_15955 PF00691 OmpA family AS145_15960 PF01618 MotA/TolQ/ExbB proton channel family AS145_15965 PF01339 CheB methylesterase AS145_15965 PF00072 Response regulator receiver domain AS145_15970 PF07194 P2 response regulator binding domain AS145_15970 PF01584 CheW-like domain AS145_15970 PF02895 Signal transducing histidine kinase, homodimeric domain AS145_15970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_15970 PF01627 Hpt domain AS145_15975 PF04344 Chemotaxis phosphatase, CheZ AS145_15980 PF00072 Response regulator receiver domain AS145_15985 PF04545 Sigma-70, region 4 AS145_15985 PF04542 Sigma-70 region 2 AS145_15985 PF04539 Sigma-70 region 3 AS145_15990 PF10609 NUBPL iron-transfer P-loop NTPase AS145_15995 PF00448 SRP54-type protein, GTPase domain AS145_16000 PF00771 FHIPEP family AS145_16005 PF01312 FlhB HrpN YscU SpaS Family AS145_16010 PF01311 Bacterial export proteins, family 1 AS145_16015 PF01313 Bacterial export proteins, family 3 AS145_16020 PF00813 FliP family AS145_16025 PF04347 Flagellar biosynthesis protein, FliO AS145_16030 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AS145_16035 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AS145_16035 PF02154 Flagellar motor switch protein FliM AS145_16055 PF18269 T3SS EscN ATPase C-terminal domain AS145_16055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS145_16065 PF14842 FliG N-terminal domain AS145_16065 PF14841 FliG middle domain AS145_16065 PF01706 FliG C-terminal domain AS145_16070 PF01514 Secretory protein of YscJ/FliF family AS145_16070 PF08345 Flagellar M-ring protein C-terminal AS145_16075 PF02049 Flagellar hook-basal body complex protein FliE AS145_16085 PF00072 Response regulator receiver domain AS145_16090 PF04055 Radical SAM superfamily AS145_16090 PF00919 Uncharacterized protein family UPF0004 AS145_16090 PF18693 TRAM domain AS145_16100 PF16671 Actin cross-linking domain AS145_16100 PF12146 Serine aminopeptidase, S33 AS145_16100 PF11647 Membrane Localization Domain AS145_16100 PF11713 Peptidase C80 family AS145_16100 PF07634 RtxA repeat AS145_16115 PF00664 ABC transporter transmembrane region AS145_16115 PF00005 ABC transporter AS145_16115 PF03412 Peptidase C39 family AS145_16125 PF03412 Peptidase C39 family AS145_16125 PF00664 ABC transporter transmembrane region AS145_16125 PF00005 ABC transporter AS145_16130 PF00486 Transcriptional regulatory protein, C terminal AS145_16130 PF00072 Response regulator receiver domain AS145_16140 PF02685 Glucokinase AS145_16145 PF01380 SIS domain AS145_16145 PF01418 Helix-turn-helix domain, rpiR family AS145_16150 PF00224 Pyruvate kinase, barrel domain AS145_16150 PF02887 Pyruvate kinase, alpha/beta domain AS145_16160 PF00873 AcrB/AcrD/AcrF family AS145_16165 PF09317 Domain of unknown function (DUF1974) AS145_16165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS145_16165 PF02770 Acyl-CoA dehydrogenase, middle domain AS145_16165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS145_16170 PF00440 Bacterial regulatory proteins, tetR family AS145_16185 PF00384 Molybdopterin oxidoreductase AS145_16190 PF02634 FdhD/NarQ family AS145_16195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_16195 PF03466 LysR substrate binding domain AS145_16215 PF00936 BMC domain AS145_16220 PF00936 BMC domain AS145_16225 PF00936 BMC domain AS145_16230 PF00171 Aldehyde dehydrogenase family AS145_16230 PF00465 Iron-containing alcohol dehydrogenase AS145_16240 PF00465 Iron-containing alcohol dehydrogenase AS145_16240 PF00171 Aldehyde dehydrogenase family AS145_16245 PF01228 Glycine radical AS145_16245 PF02901 Pyruvate formate lyase-like AS145_16250 PF04055 Radical SAM superfamily AS145_16250 PF13187 4Fe-4S dicluster domain AS145_16255 PF00936 BMC domain AS145_16260 PF06130 Phosphate propanoyltransferase AS145_16270 PF00893 Small Multidrug Resistance protein AS145_16275 PF00893 Small Multidrug Resistance protein AS145_16305 PF04074 YhcH/YjgK/YiaL AS145_16310 PF00474 Sodium:solute symporter family AS145_16315 PF00480 ROK family AS145_16320 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AS145_16325 PF01418 Helix-turn-helix domain, rpiR family AS145_16325 PF01380 SIS domain AS145_16330 PF00701 Dihydrodipicolinate synthetase family AS145_16335 PF00141 Peroxidase AS145_16340 PF00455 DeoR C terminal sensor domain AS145_16340 PF08220 DeoR-like helix-turn-helix domain AS145_16345 PF07690 Major Facilitator Superfamily AS145_16350 PF07881 L-fucose isomerase, first N-terminal domain AS145_16350 PF02952 L-fucose isomerase, C-terminal domain AS145_16350 PF07882 L-fucose isomerase, second N-terminal domain AS145_16355 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS145_16355 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AS145_16365 PF05025 RbsD / FucU transport protein family AS145_16370 PF00465 Iron-containing alcohol dehydrogenase AS145_16375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS145_16375 PF00005 ABC transporter AS145_16380 PF12911 N-terminal TM domain of oligopeptide transport permease C AS145_16380 PF00528 Binding-protein-dependent transport system inner membrane component AS145_16385 PF00528 Binding-protein-dependent transport system inner membrane component AS145_16390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS145_16400 PF01476 LysM domain AS145_16400 PF03734 L,D-transpeptidase catalytic domain AS145_16400 PF17969 L,D-transpeptidase C-terminal domain AS145_16415 PF05971 RNA methyltransferase AS145_16420 PF00877 NlpC/P60 family AS145_16425 PF01648 4'-phosphopantetheinyl transferase superfamily AS145_16430 PF00085 Thioredoxin AS145_16440 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AS145_16445 PF01842 ACT domain AS145_16445 PF00551 Formyl transferase AS145_16455 PF13396 Phospholipase_D-nuclease N-terminal AS145_16455 PF13091 PLD-like domain AS145_16470 PF01551 Peptidase family M23 AS145_16475 PF00128 Alpha amylase, catalytic domain AS145_16480 PF01464 Transglycosylase SLT domain AS145_16480 PF10145 Phage-related minor tail protein AS145_16480 PF01551 Peptidase family M23 AS145_16485 PF00230 Major intrinsic protein AS145_16490 PF02075 Crossover junction endodeoxyribonuclease RuvC AS145_16500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AS145_16520 PF04055 Radical SAM superfamily AS145_16520 PF08497 Radical SAM N-terminal AS145_16520 PF11842 Domain of unknown function (DUF3362) AS145_16530 PF00873 AcrB/AcrD/AcrF family AS145_16535 PF00529 HlyD membrane-fusion protein of T1SS AS145_16535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS145_16540 PF00990 Diguanylate cyclase, GGDEF domain AS145_16545 PF01734 Patatin-like phospholipase AS145_16550 PF00209 Sodium:neurotransmitter symporter family AS145_16565 PF00691 OmpA family AS145_16565 PF01389 OmpA-like transmembrane domain AS145_16570 PF00691 OmpA family AS145_16570 PF01389 OmpA-like transmembrane domain AS145_16575 PF01389 OmpA-like transmembrane domain AS145_16575 PF00691 OmpA family AS145_16580 PF03949 Malic enzyme, NAD binding domain AS145_16580 PF00390 Malic enzyme, N-terminal domain AS145_16585 PF12833 Helix-turn-helix domain AS145_16590 PF01554 MatE AS145_16595 PF10692 Protein of unknown function (DUF2498) AS145_16600 PF00072 Response regulator receiver domain AS145_16600 PF00990 Diguanylate cyclase, GGDEF domain AS145_16605 PF00860 Permease family AS145_16615 PF01235 Sodium:alanine symporter family AS145_16620 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AS145_16620 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AS145_16625 PF01699 Sodium/calcium exchanger protein AS145_16630 PF08534 Redoxin AS145_16640 PF00293 NUDIX domain AS145_16660 PF00005 ABC transporter AS145_16665 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AS145_16665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS145_16670 PF03932 CutC family AS145_16675 PF00480 ROK family AS145_16685 PF01435 Peptidase family M48 AS145_16690 PF12849 PBP superfamily domain AS145_16695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_16695 PF00512 His Kinase A (phospho-acceptor) domain AS145_16695 PF11808 Phosphate regulon sensor protein PhoR AS145_16695 PF00989 PAS fold AS145_16700 PF00486 Transcriptional regulatory protein, C terminal AS145_16700 PF00072 Response regulator receiver domain AS145_16705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS145_16710 PF02515 CoA-transferase family III AS145_16715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS145_16715 PF02770 Acyl-CoA dehydrogenase, middle domain AS145_16715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS145_16720 PF01590 GAF domain AS145_16720 PF02954 Bacterial regulatory protein, Fis family AS145_16720 PF00158 Sigma-54 interaction domain AS145_16725 PF00171 Aldehyde dehydrogenase family AS145_16735 PF00892 EamA-like transporter family AS145_16740 PF12431 Transcriptional regulator AS145_16740 PF00072 Response regulator receiver domain AS145_16745 PF00989 PAS fold AS145_16745 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AS145_16745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_16745 PF17203 Single cache domain 3 AS145_16750 PF03949 Malic enzyme, NAD binding domain AS145_16750 PF00390 Malic enzyme, N-terminal domain AS145_16755 PF03390 2-hydroxycarboxylate transporter family AS145_16760 PF01047 MarR family AS145_16765 PF00529 HlyD membrane-fusion protein of T1SS AS145_16765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS145_16795 PF13597 Anaerobic ribonucleoside-triphosphate reductase AS145_16795 PF03477 ATP cone domain AS145_16805 PF01653 NAD-dependent DNA ligase adenylation domain AS145_16805 PF03120 NAD-dependent DNA ligase OB-fold domain AS145_16805 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AS145_16805 PF12826 Helix-hairpin-helix motif AS145_16805 PF00533 BRCA1 C Terminus (BRCT) domain AS145_16810 PF04354 ZipA, C-terminal FtsZ-binding domain AS145_16815 PF02463 RecF/RecN/SMC N terminal domain AS145_16815 PF06470 SMC proteins Flexible Hinge Domain AS145_16825 PF03458 UPF0126 domain AS145_16835 PF05951 Bacterial protein of unknown function (DUF882) AS145_16840 PF03734 L,D-transpeptidase catalytic domain AS145_16840 PF01471 Putative peptidoglycan binding domain AS145_16855 PF00535 Glycosyl transferase family 2 AS145_16870 PF00128 Alpha amylase, catalytic domain AS145_16880 PF00196 Bacterial regulatory proteins, luxR family AS145_16880 PF00072 Response regulator receiver domain AS145_16900 PF02254 TrkA-N domain AS145_16900 PF00999 Sodium/hydrogen exchanger family AS145_16900 PF02080 TrkA-C domain AS145_16905 PF00990 Diguanylate cyclase, GGDEF domain AS145_16910 PF09179 TilS substrate binding domain AS145_16910 PF01171 PP-loop family AS145_16910 PF11734 TilS substrate C-terminal domain AS145_16915 PF01431 Peptidase family M13 AS145_16915 PF05649 Peptidase family M13 AS145_16925 PF12848 ABC transporter AS145_16925 PF00005 ABC transporter AS145_16925 PF16326 ABC transporter C-terminal domain AS145_16930 PF13302 Acetyltransferase (GNAT) domain AS145_16935 PF13520 Amino acid permease AS145_16940 PF03466 LysR substrate binding domain AS145_16940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_16945 PF12706 Beta-lactamase superfamily domain AS145_16955 PF03466 LysR substrate binding domain AS145_16955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_16965 PF08543 Phosphomethylpyrimidine kinase AS145_16970 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AS145_16970 PF01276 Orn/Lys/Arg decarboxylase, major domain AS145_16970 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AS145_16975 PF13520 Amino acid permease AS145_16980 PF00486 Transcriptional regulatory protein, C terminal AS145_16980 PF18500 CadC C-terminal domain 1 AS145_16985 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AS145_16990 PF02811 PHP domain AS145_16990 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AS145_16990 PF07733 Bacterial DNA polymerase III alpha NTPase domain AS145_16990 PF01336 OB-fold nucleic acid binding domain AS145_16990 PF14579 Helix-hairpin-helix motif AS145_16995 PF01351 Ribonuclease HII AS145_17000 PF02684 Lipid-A-disaccharide synthetase AS145_17005 PF00132 Bacterial transferase hexapeptide (six repeats) AS145_17005 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AS145_17010 PF07977 FabA-like domain AS145_17015 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AS145_17015 PF00132 Bacterial transferase hexapeptide (six repeats) AS145_17020 PF03938 Outer membrane protein (OmpH-like) AS145_17025 PF07244 Surface antigen variable number repeat AS145_17025 PF01103 Surface antigen AS145_17030 PF02163 Peptidase family M50 AS145_17030 PF17820 PDZ domain AS145_17035 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AS145_17035 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AS145_17035 PF13288 DXP reductoisomerase C-terminal domain AS145_17045 PF01255 Putative undecaprenyl diphosphate synthase AS145_17050 PF01765 Ribosome recycling factor AS145_17055 PF00696 Amino acid kinase family AS145_17060 PF00889 Elongation factor TS AS145_17065 PF00318 Ribosomal protein S2 AS145_17070 PF00557 Metallopeptidase family M24 AS145_17075 PF01966 HD domain AS145_17075 PF08335 GlnD PII-uridylyltransferase AS145_17075 PF01842 ACT domain AS145_17075 PF01909 Nucleotidyltransferase domain AS145_17080 PF00132 Bacterial transferase hexapeptide (six repeats) AS145_17080 PF14602 Hexapeptide repeat of succinyl-transferase AS145_17080 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AS145_17085 PF11944 Protein of unknown function (DUF3461) AS145_17090 PF00367 phosphotransferase system, EIIB AS145_17090 PF02378 Phosphotransferase system, EIIC AS145_17095 PF07148 Maltose operon periplasmic protein precursor (MalM) AS145_17100 PF02264 LamB porin AS145_17105 PF00258 Flavodoxin AS145_17110 PF00849 RNA pseudouridylate synthase AS145_17115 PF04287 tRNA pseudouridine synthase C AS145_17140 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) AS145_17145 PF07348 Syd protein (SUKH-2) AS145_17150 PF14489 QueF-like protein AS145_17150 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AS145_17160 PF07694 5TMR of 5TMR-LYT AS145_17160 PF00990 Diguanylate cyclase, GGDEF domain AS145_17165 PF11892 Domain of unknown function (DUF3412) AS145_17165 PF03641 Possible lysine decarboxylase AS145_17165 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AS145_17170 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AS145_17170 PF01367 5'-3' exonuclease, C-terminal SAM fold AS145_17175 PF00180 Isocitrate/isopropylmalate dehydrogenase AS145_17175 PF18324 Hypothetical protein TT1725 AS145_17185 PF18125 RlmM ferredoxin-like domain AS145_17185 PF01728 FtsJ-like methyltransferase AS145_17190 PF04241 Protein of unknown function (DUF423) AS145_17200 PF03466 LysR substrate binding domain AS145_17200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_17205 PF00672 HAMP domain AS145_17205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_17210 PF11798 IMS family HHH motif AS145_17210 PF00817 impB/mucB/samB family AS145_17210 PF11799 impB/mucB/samB family C-terminal domain AS145_17225 PF02424 ApbE family AS145_17230 PF00111 2Fe-2S iron-sulfur cluster binding domain AS145_17230 PF00970 Oxidoreductase FAD-binding domain AS145_17230 PF00175 Oxidoreductase NAD-binding domain AS145_17235 PF02508 Rnf-Nqr subunit, membrane protein AS145_17240 PF02508 Rnf-Nqr subunit, membrane protein AS145_17245 PF04205 FMN-binding domain AS145_17250 PF03116 NQR2, RnfD, RnfE family AS145_17255 PF11973 NQRA C-terminal domain AS145_17255 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AS145_17260 PF01722 BolA-like protein AS145_17265 PF05175 Methyltransferase small domain AS145_17275 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AS145_17285 PF07690 Major Facilitator Superfamily AS145_17290 PF03502 Nucleoside-specific channel-forming protein, Tsx AS145_17295 PF04461 Protein of unknown function (DUF520) AS145_17300 PF08546 Ketopantoate reductase PanE/ApbA C terminal AS145_17300 PF02558 Ketopantoate reductase PanE/ApbA AS145_17305 PF01965 DJ-1/PfpI family AS145_17310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS145_17310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS145_17310 PF00205 Thiamine pyrophosphate enzyme, central domain AS145_17315 PF03306 Alpha-acetolactate decarboxylase AS145_17320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_17320 PF03466 LysR substrate binding domain AS145_17345 PF05638 Type VI secretion system effector, Hcp AS145_17350 PF00196 Bacterial regulatory proteins, luxR family AS145_17350 PF03472 Autoinducer binding domain AS145_17360 PF06965 Na+/H+ antiporter 1 AS145_17360 PF13462 Thioredoxin AS145_17365 PF16363 GDP-mannose 4,6 dehydratase AS145_17370 PF00175 Oxidoreductase NAD-binding domain AS145_17370 PF00970 Oxidoreductase FAD-binding domain AS145_17370 PF00042 Globin AS145_17375 PF03063 Prismane/CO dehydrogenase family AS145_17380 PF00210 Ferritin-like domain AS145_17420 PF00106 short chain dehydrogenase AS145_17430 PF03441 FAD binding domain of DNA photolyase AS145_17430 PF00875 DNA photolyase AS145_17435 PF13411 MerR HTH family regulatory protein AS145_17440 PF08349 Protein of unknown function (DUF1722) AS145_17470 PF01817 Chorismate mutase type II AS145_17470 PF00800 Prephenate dehydratase AS145_17500 PF09588 YqaJ-like viral recombinase domain AS145_17540 PF04002 RadC-like JAB domain AS145_17550 PF04055 Radical SAM superfamily AS145_17555 PF06508 Queuosine biosynthesis protein QueC AS145_17570 PF01242 6-pyruvoyl tetrahydropterin synthase AS145_17585 PF00271 Helicase conserved C-terminal domain AS145_17585 PF00270 DEAD/DEAH box helicase AS145_17585 PF16124 RecQ zinc-binding AS145_17585 PF09382 RQC domain AS145_17585 PF00570 HRDC domain AS145_17605 PF16124 RecQ zinc-binding AS145_17605 PF00570 HRDC domain AS145_17605 PF09382 RQC domain AS145_17605 PF00271 Helicase conserved C-terminal domain AS145_17605 PF00270 DEAD/DEAH box helicase AS145_17610 PF18339 RapA N-terminal Tudor like domain 1 AS145_17610 PF18337 RapA N-terminal Tudor like domain AS145_17610 PF00271 Helicase conserved C-terminal domain AS145_17610 PF00176 SNF2 family N-terminal domain AS145_17610 PF12137 RNA polymerase recycling family C-terminal AS145_17635 PF07715 TonB-dependent Receptor Plug Domain AS145_17635 PF00593 TonB dependent receptor AS145_17655 PF12857 TOBE-like domain AS145_17655 PF00005 ABC transporter AS145_17660 PF01590 GAF domain AS145_17660 PF00158 Sigma-54 interaction domain AS145_17695 PF13649 Methyltransferase domain AS145_17710 PF03976 Polyphosphate kinase 2 (PPK2) AS145_17715 PF01740 STAS domain AS145_17715 PF00916 Sulfate permease family AS145_17720 PF07995 Glucose / Sorbosone dehydrogenase AS145_17730 PF00672 HAMP domain AS145_17730 PF02743 Cache domain AS145_17730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_17735 PF03573 outer membrane porin, OprD family AS145_17740 PF00106 short chain dehydrogenase AS145_17760 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AS145_17775 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AS145_17775 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AS145_17780 PF12392 Collagenase AS145_17780 PF01136 Peptidase family U32 AS145_17785 PF01810 LysE type translocator AS145_17790 PF03466 LysR substrate binding domain AS145_17790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_17800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_17800 PF02743 Cache domain AS145_17800 PF00672 HAMP domain AS145_17805 PF00072 Response regulator receiver domain AS145_17815 PF02895 Signal transducing histidine kinase, homodimeric domain AS145_17815 PF01584 CheW-like domain AS145_17815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_17815 PF01627 Hpt domain AS145_17815 PF07194 P2 response regulator binding domain AS145_17820 PF00672 HAMP domain AS145_17820 PF12729 Four helix bundle sensory module for signal transduction AS145_17820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_17825 PF01584 CheW-like domain AS145_17830 PF02203 Tar ligand binding domain homologue AS145_17830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_17830 PF00672 HAMP domain AS145_17835 PF01739 CheR methyltransferase, SAM binding domain AS145_17835 PF03705 CheR methyltransferase, all-alpha domain AS145_17840 PF03975 CheD chemotactic sensory transduction AS145_17845 PF00072 Response regulator receiver domain AS145_17845 PF01339 CheB methylesterase AS145_17850 PF00266 Aminotransferase class-V AS145_17890 PF00989 PAS fold AS145_17890 PF00990 Diguanylate cyclase, GGDEF domain AS145_17890 PF01590 GAF domain AS145_17890 PF00563 EAL domain AS145_17900 PF12838 4Fe-4S dicluster domain AS145_17905 PF01168 Alanine racemase, N-terminal domain AS145_17905 PF00842 Alanine racemase, C-terminal domain AS145_17910 PF00772 DnaB-like helicase N terminal domain AS145_17910 PF03796 DnaB-like helicase C terminal domain AS145_17920 PF00563 EAL domain AS145_17920 PF12792 CSS motif domain associated with EAL AS145_17925 PF02872 5'-nucleotidase, C-terminal domain AS145_17925 PF00149 Calcineurin-like phosphoesterase AS145_17945 PF02954 Bacterial regulatory protein, Fis family AS145_17945 PF00072 Response regulator receiver domain AS145_17945 PF00158 Sigma-54 interaction domain AS145_17950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS145_17950 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AS145_17960 PF04102 SlyX AS145_17965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS145_17970 PF09526 Probable metal-binding protein (DUF2387) AS145_17980 PF00072 Response regulator receiver domain AS145_17980 PF01584 CheW-like domain AS145_17985 PF00561 alpha/beta hydrolase fold AS145_17990 PF00360 Phytochrome region AS145_17990 PF00990 Diguanylate cyclase, GGDEF domain AS145_17990 PF00563 EAL domain AS145_17990 PF01590 GAF domain AS145_17995 PF06794 Uncharacterised protein family (UPF0270) AS145_18000 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AS145_18000 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AS145_18000 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AS145_18005 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AS145_18010 PF00535 Glycosyl transferase family 2 AS145_18015 PF01370 NAD dependent epimerase/dehydratase family AS145_18015 PF02911 Formyl transferase, C-terminal domain AS145_18015 PF00551 Formyl transferase AS145_18020 PF01522 Polysaccharide deacetylase AS145_18025 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AS145_18030 PF00892 EamA-like transporter family AS145_18035 PF00893 Small Multidrug Resistance protein AS145_18040 PF00485 Phosphoribulokinase / Uridine kinase family AS145_18055 PF02566 OsmC-like protein AS145_18060 PF13545 Crp-like helix-turn-helix domain AS145_18060 PF00027 Cyclic nucleotide-binding domain AS145_18065 PF13847 Methyltransferase domain AS145_18070 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AS145_18070 PF18416 N-acetylglucosamine binding protein domain 2 AS145_18075 PF17945 Beta/Gamma crystallin AS145_18075 PF12561 ToxR activated gene A lipoprotein domain AS145_18080 PF00704 Glycosyl hydrolases family 18 AS145_18080 PF08329 Chitinase A, N-terminal domain AS145_18085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_18085 PF00512 His Kinase A (phospho-acceptor) domain AS145_18085 PF00989 PAS fold AS145_18095 PF13443 Cro/C1-type HTH DNA-binding domain AS145_18100 PF12832 MFS_1 like family AS145_18105 PF00593 TonB dependent receptor AS145_18105 PF07715 TonB-dependent Receptor Plug Domain AS145_18125 PF01243 Pyridoxamine 5'-phosphate oxidase AS145_18130 PF06228 Haem utilisation ChuX/HutX AS145_18140 PF01032 FecCD transport family AS145_18145 PF00005 ABC transporter AS145_18155 PF01370 NAD dependent epimerase/dehydratase family AS145_18165 PF01791 DeoC/LacD family aldolase AS145_18170 PF07662 Na+ dependent nucleoside transporter C-terminus AS145_18170 PF07670 Nucleoside recognition AS145_18170 PF01773 Na+ dependent nucleoside transporter N-terminus AS145_18175 PF01048 Phosphorylase superfamily AS145_18180 PF03466 LysR substrate binding domain AS145_18180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_18195 PF01464 Transglycosylase SLT domain AS145_18200 PF01048 Phosphorylase superfamily AS145_18295 PF01343 Peptidase family S49 AS145_18310 PF03354 Phage Terminase AS145_18355 PF00004 ATPase family associated with various cellular activities (AAA) AS145_18360 PF01555 DNA methylase AS145_18440 PF01381 Helix-turn-helix AS145_18440 PF00717 Peptidase S24-like AS145_18480 PF00589 Phage integrase family AS145_18480 PF12167 Arm DNA-binding domain AS145_18485 PF00005 ABC transporter AS145_18485 PF12848 ABC transporter AS145_18495 PF00860 Permease family AS145_18500 PF00226 DnaJ domain AS145_18500 PF05099 Tellurite resistance protein TerB AS145_18505 PF00483 Nucleotidyl transferase AS145_18510 PF01636 Phosphotransferase enzyme family AS145_18515 PF04453 LPS transport system D AS145_18515 PF03968 OstA-like protein AS145_18520 PF09312 SurA N-terminal domain AS145_18520 PF00639 PPIC-type PPIASE domain AS145_18525 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AS145_18530 PF00398 Ribosomal RNA adenine dimethylase AS145_18535 PF04379 ApaG domain AS145_18540 PF00149 Calcineurin-like phosphoesterase AS145_18550 PF00296 Luciferase-like monooxygenase AS145_18570 PF13193 AMP-binding enzyme C-terminal domain AS145_18570 PF00501 AMP-binding enzyme AS145_18580 PF01018 GTP1/OBG AS145_18580 PF01926 50S ribosome-binding GTPase AS145_18585 PF01016 Ribosomal L27 protein AS145_18595 PF00348 Polyprenyl synthetase AS145_18600 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AS145_18605 PF01145 SPFH domain / Band 7 family AS145_18610 PF01145 SPFH domain / Band 7 family AS145_18610 PF12221 Bacterial membrane protein N terminal AS145_18615 PF16360 GTP-binding GTPase Middle Region AS145_18615 PF13167 GTP-binding GTPase N-terminal AS145_18615 PF01926 50S ribosome-binding GTPase AS145_18620 PF17209 Hfq protein AS145_18630 PF01119 DNA mismatch repair protein, C-terminal domain AS145_18630 PF08676 MutL C terminal dimerisation domain AS145_18635 PF01520 N-acetylmuramoyl-L-alanine amidase AS145_18640 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AS145_18645 PF03853 YjeF-related protein N-terminus AS145_18645 PF01256 Carbohydrate kinase AS145_18650 PF08331 Domain of unknown function (DUF1730) AS145_18655 PF00480 ROK family AS145_18670 PF00005 ABC transporter AS145_18670 PF09383 NIL domain AS145_18675 PF00528 Binding-protein-dependent transport system inner membrane component AS145_18680 PF03180 NLPA lipoprotein AS145_18685 PF02357 Transcription termination factor nusG AS145_18690 PF00672 HAMP domain AS145_18690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_18690 PF12729 Four helix bundle sensory module for signal transduction AS145_18695 PF00563 EAL domain AS145_18695 PF00990 Diguanylate cyclase, GGDEF domain AS145_18695 PF03707 Bacterial signalling protein N terminal repeat AS145_18700 PF00512 His Kinase A (phospho-acceptor) domain AS145_18700 PF09456 RcsC Alpha-Beta-Loop (ABL) AS145_18700 PF00072 Response regulator receiver domain AS145_18700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_18710 PF13286 Phosphohydrolase-associated domain AS145_18710 PF01966 HD domain AS145_18715 PF00072 Response regulator receiver domain AS145_18715 PF18415 Histidine kinase receptor ArcB trans-membrane domain AS145_18715 PF01627 Hpt domain AS145_18715 PF00512 His Kinase A (phospho-acceptor) domain AS145_18715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_18715 PF00989 PAS fold AS145_18735 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AS145_18740 PF03466 LysR substrate binding domain AS145_18740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_18750 PF01259 SAICAR synthetase AS145_18755 PF06804 NlpB/DapX lipoprotein AS145_18760 PF00701 Dihydrodipicolinate synthetase family AS145_18765 PF01842 ACT domain AS145_18770 PF00578 AhpC/TSA family AS145_18775 PF03887 YfbU domain AS145_18780 PF04217 Protein of unknown function, DUF412 AS145_18785 PF00871 Acetokinase family AS145_18790 PF01515 Phosphate acetyl/butaryl transferase AS145_18790 PF07085 DRTGG domain AS145_18795 PF10369 Small subunit of acetolactate synthase AS145_18800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS145_18800 PF00205 Thiamine pyrophosphate enzyme, central domain AS145_18800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS145_18810 PF01569 PAP2 superfamily AS145_18820 PF00682 HMGL-like AS145_18820 PF08502 LeuA allosteric (dimerisation) domain AS145_18825 PF00180 Isocitrate/isopropylmalate dehydrogenase AS145_18830 PF00330 Aconitase family (aconitate hydratase) AS145_18835 PF00694 Aconitase C-terminal domain AS145_18855 PF00528 Binding-protein-dependent transport system inner membrane component AS145_18860 PF00005 ABC transporter AS145_18865 PF13638 PIN domain AS145_18865 PF02562 PhoH-like protein AS145_18875 PF02867 Ribonucleotide reductase, barrel domain AS145_18875 PF00317 Ribonucleotide reductase, all-alpha domain AS145_18875 PF08343 Ribonucleotide reductase N-terminal AS145_18905 PF12137 RNA polymerase recycling family C-terminal AS145_18905 PF00271 Helicase conserved C-terminal domain AS145_18905 PF18339 RapA N-terminal Tudor like domain 1 AS145_18905 PF00176 SNF2 family N-terminal domain AS145_18905 PF18337 RapA N-terminal Tudor like domain AS145_18910 PF00849 RNA pseudouridylate synthase AS145_18920 PF00563 EAL domain AS145_18920 PF00990 Diguanylate cyclase, GGDEF domain AS145_18920 PF13188 PAS domain AS145_18920 PF03707 Bacterial signalling protein N terminal repeat AS145_18930 PF00118 TCP-1/cpn60 chaperonin family AS145_18935 PF00166 Chaperonin 10 Kd subunit AS145_18940 PF01554 MatE AS145_18945 PF04186 FxsA cytoplasmic membrane protein AS145_18950 PF10415 Fumarase C C-terminus AS145_18950 PF00206 Lyase AS145_18955 PF03605 Anaerobic c4-dicarboxylate membrane transporter AS145_18960 PF00267 Gram-negative porin AS145_18965 PF07690 Major Facilitator Superfamily AS145_18970 PF03466 LysR substrate binding domain AS145_18970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_18975 PF03413 Peptidase propeptide and YPEB domain AS145_18975 PF01447 Thermolysin metallopeptidase, catalytic domain AS145_18975 PF02868 Thermolysin metallopeptidase, alpha-helical domain AS145_18975 PF04151 Bacterial pre-peptidase C-terminal domain AS145_18975 PF07504 Fungalysin/Thermolysin Propeptide Motif AS145_18985 PF13302 Acetyltransferase (GNAT) domain AS145_18995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AS145_18995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AS145_19000 PF07690 Major Facilitator Superfamily AS145_19005 PF01725 Ham1 family AS145_19010 PF06969 HemN C-terminal domain AS145_19010 PF04055 Radical SAM superfamily AS145_19015 PF03889 Alternative ribosome-rescue factor A AS145_19020 PF01872 RibD C-terminal domain AS145_19025 PF13411 MerR HTH family regulatory protein AS145_19030 PF01808 AICARFT/IMPCHase bienzyme AS145_19030 PF02142 MGS-like domain AS145_19035 PF02844 Phosphoribosylglycinamide synthetase, N domain AS145_19035 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AS145_19035 PF02843 Phosphoribosylglycinamide synthetase, C domain AS145_19050 PF00128 Alpha amylase, catalytic domain AS145_19065 PF00140 Sigma-70 factor, region 1.2 AS145_19065 PF04546 Sigma-70, non-essential region AS145_19065 PF04539 Sigma-70 region 3 AS145_19065 PF04545 Sigma-70, region 4 AS145_19065 PF03979 Sigma-70 factor, region 1.1 AS145_19065 PF04542 Sigma-70 region 2 AS145_19070 PF08278 DNA primase DnaG DnaB-binding AS145_19070 PF10410 DnaB-helicase binding domain of primase AS145_19070 PF08275 DNA primase catalytic core, N-terminal domain AS145_19070 PF01807 CHC2 zinc finger AS145_19075 PF09424 Yqey-like protein AS145_19080 PF00814 Glycoprotease family AS145_19085 PF04542 Sigma-70 region 2 AS145_19085 PF00140 Sigma-70 factor, region 1.2 AS145_19085 PF04539 Sigma-70 region 3 AS145_19085 PF04545 Sigma-70, region 4 AS145_19090 PF01476 LysM domain AS145_19090 PF01551 Peptidase family M23 AS145_19095 PF09335 SNARE associated Golgi protein AS145_19105 PF01975 Survival protein SurE AS145_19110 PF01142 tRNA pseudouridine synthase D (TruD) AS145_19115 PF02542 YgbB family AS145_19120 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AS145_19125 PF04977 Septum formation initiator AS145_19130 PF00113 Enolase, C-terminal TIM barrel domain AS145_19130 PF03952 Enolase, N-terminal domain AS145_19135 PF00117 Glutamine amidotransferase class-I AS145_19135 PF06418 CTP synthase N-terminus AS145_19140 PF03819 MazG nucleotide pyrophosphohydrolase domain AS145_19145 PF02824 TGS domain AS145_19145 PF04607 Region found in RelA / SpoT proteins AS145_19145 PF13291 ACT domain AS145_19150 PF05958 tRNA (Uracil-5-)-methyltransferase AS145_19150 PF01938 TRAM domain AS145_19155 PF00072 Response regulator receiver domain AS145_19155 PF01627 Hpt domain AS145_19155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_19155 PF00512 His Kinase A (phospho-acceptor) domain AS145_19155 PF00672 HAMP domain AS145_19155 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AS145_19160 PF07308 Protein of unknown function (DUF1456) AS145_19165 PF01510 N-acetylmuramoyl-L-alanine amidase AS145_19170 PF08220 DeoR-like helix-turn-helix domain AS145_19170 PF00455 DeoR C terminal sensor domain AS145_19175 PF08013 Tagatose 6 phosphate kinase AS145_19180 PF01380 SIS domain AS145_19185 PF03830 PTS system sorbose subfamily IIB component AS145_19190 PF03609 PTS system sorbose-specific iic component AS145_19195 PF03613 PTS system mannose/fructose/sorbose family IID component AS145_19200 PF03610 PTS system fructose IIA component AS145_19205 PF01979 Amidohydrolase family AS145_19210 PF01116 Fructose-bisphosphate aldolase class-II AS145_19220 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AS145_19225 PF11967 Recombination protein O N terminal AS145_19225 PF02565 Recombination protein O C terminal AS145_19230 PF01926 50S ribosome-binding GTPase AS145_19230 PF07650 KH domain AS145_19235 PF00035 Double-stranded RNA binding motif AS145_19235 PF14622 Ribonuclease-III-like AS145_19240 PF10502 Signal peptidase, peptidase S26 AS145_19245 PF00009 Elongation factor Tu GTP binding domain AS145_19245 PF06421 GTP-binding protein LepA C-terminus AS145_19245 PF03144 Elongation factor Tu domain 2 AS145_19245 PF00679 Elongation factor G C-terminus AS145_19255 PF17188 MucB/RseB C-terminal domain AS145_19255 PF03888 MucB/RseB N-terminal domain AS145_19260 PF03872 Anti sigma-E protein RseA, N-terminal domain AS145_19260 PF03873 Anti sigma-E protein RseA, C-terminal domain AS145_19265 PF04542 Sigma-70 region 2 AS145_19265 PF08281 Sigma-70, region 4 AS145_19270 PF02910 Fumarate reductase flavoprotein C-term AS145_19270 PF00890 FAD binding domain AS145_19280 PF03937 Flavinator of succinate dehydrogenase AS145_19285 PF01571 Aminomethyltransferase folate-binding domain AS145_19290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_19290 PF03466 LysR substrate binding domain AS145_19305 PF03091 CutA1 divalent ion tolerance protein AS145_19310 PF02683 Cytochrome C biogenesis protein transmembrane region AS145_19310 PF11412 Disulphide bond corrector protein DsbC AS145_19320 PF01266 FAD dependent oxidoreductase AS145_19325 PF01116 Fructose-bisphosphate aldolase class-II AS145_19330 PF00162 Phosphoglycerate kinase AS145_19335 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AS145_19335 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS145_19340 PF00480 ROK family AS145_19345 PF01208 Uroporphyrinogen decarboxylase (URO-D) AS145_19350 PF09297 NADH pyrophosphatase zinc ribbon domain AS145_19350 PF00293 NUDIX domain AS145_19355 PF00171 Aldehyde dehydrogenase family AS145_19355 PF14850 DNA-binding domain of Proline dehydrogenase AS145_19355 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AS145_19355 PF01619 Proline dehydrogenase AS145_19360 PF08239 Bacterial SH3 domain AS145_19365 PF00027 Cyclic nucleotide-binding domain AS145_19365 PF00520 Ion transport protein AS145_19370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_19370 PF00672 HAMP domain AS145_19370 PF02743 Cache domain AS145_19380 PF03710 Glutamate-ammonia ligase adenylyltransferase AS145_19380 PF08335 GlnD PII-uridylyltransferase AS145_19400 PF00326 Prolyl oligopeptidase family AS145_19400 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AS145_19405 PF00291 Pyridoxal-phosphate dependent enzyme AS145_19410 PF00528 Binding-protein-dependent transport system inner membrane component AS145_19415 PF00528 Binding-protein-dependent transport system inner membrane component AS145_19420 PF00005 ABC transporter AS145_19425 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS145_19430 PF12704 MacB-like periplasmic core domain AS145_19430 PF00005 ABC transporter AS145_19430 PF02687 FtsX-like permease family AS145_19435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS145_19440 PF00486 Transcriptional regulatory protein, C terminal AS145_19440 PF00072 Response regulator receiver domain AS145_19445 PF16527 Two-component sensor protein CpxA, periplasmic domain AS145_19445 PF00672 HAMP domain AS145_19445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_19445 PF00512 His Kinase A (phospho-acceptor) domain AS145_19450 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AS145_19450 PF09297 NADH pyrophosphatase zinc ribbon domain AS145_19450 PF00293 NUDIX domain AS145_19485 PF03060 Nitronate monooxygenase AS145_19495 PF00445 Ribonuclease T2 family AS145_19510 PF03150 Di-haem cytochrome c peroxidase AS145_19510 PF00034 Cytochrome c AS145_19515 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase AS145_19530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_19530 PF03466 LysR substrate binding domain AS145_19535 PF00270 DEAD/DEAH box helicase AS145_19535 PF00271 Helicase conserved C-terminal domain AS145_19545 PF00753 Metallo-beta-lactamase superfamily AS145_19550 PF01425 Amidase AS145_19555 PF04371 Porphyromonas-type peptidyl-arginine deiminase AS145_19560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_19560 PF03466 LysR substrate binding domain AS145_19570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AS145_19575 PF00583 Acetyltransferase (GNAT) family AS145_19595 PF00009 Elongation factor Tu GTP binding domain AS145_19595 PF16658 Class II release factor RF3, C-terminal domain AS145_19595 PF03144 Elongation factor Tu domain 2 AS145_19600 PF00072 Response regulator receiver domain AS145_19600 PF00990 Diguanylate cyclase, GGDEF domain AS145_19605 PF13426 PAS domain AS145_19605 PF00563 EAL domain AS145_19605 PF00990 Diguanylate cyclase, GGDEF domain AS145_19610 PF05762 VWA domain containing CoxE-like protein AS145_19615 PF07728 AAA domain (dynein-related subfamily) AS145_19615 PF12592 Protein of unknown function (DUF3763) AS145_19615 PF17868 AAA lid domain AS145_19625 PF00583 Acetyltransferase (GNAT) family AS145_19635 PF00501 AMP-binding enzyme AS145_19645 PF04262 Glutamate-cysteine ligase AS145_19650 PF00675 Insulinase (Peptidase family M16) AS145_19650 PF05193 Peptidase M16 inactive domain AS145_19655 PF09335 SNARE associated Golgi protein AS145_19660 PF00698 Acyl transferase domain AS145_19660 PF08240 Alcohol dehydrogenase GroES-like domain AS145_19660 PF08990 Erythronolide synthase docking AS145_19660 PF16197 Ketoacyl-synthetase C-terminal extension AS145_19660 PF00109 Beta-ketoacyl synthase, N-terminal domain AS145_19660 PF02801 Beta-ketoacyl synthase, C-terminal domain AS145_19660 PF14765 Polyketide synthase dehydratase AS145_19660 PF08659 KR domain AS145_19660 PF00550 Phosphopantetheine attachment site AS145_19675 PF00175 Oxidoreductase NAD-binding domain AS145_19675 PF00970 Oxidoreductase FAD-binding domain AS145_19680 PF01281 Ribosomal protein L9, N-terminal domain AS145_19680 PF03948 Ribosomal protein L9, C-terminal domain AS145_19685 PF01084 Ribosomal protein S18 AS145_19690 PF01250 Ribosomal protein S6 AS145_19695 PF01566 Natural resistance-associated macrophage protein AS145_19715 PF13673 Acetyltransferase (GNAT) domain AS145_19725 PF08032 RNA 2'-O ribose methyltransferase substrate binding AS145_19725 PF00588 SpoU rRNA Methylase family AS145_19730 PF00575 S1 RNA binding domain AS145_19730 PF08206 Ribonuclease B OB domain AS145_19730 PF08461 Ribonuclease R winged-helix domain AS145_19730 PF17876 Cold shock domain AS145_19730 PF00773 RNB domain AS145_19735 PF00990 Diguanylate cyclase, GGDEF domain AS145_19740 PF02664 S-Ribosylhomocysteinase (LuxS) AS145_19750 PF00543 Nitrogen regulatory protein P-II AS145_19755 PF02540 NAD synthase AS145_19755 PF00795 Carbon-nitrogen hydrolase AS145_19790 PF05567 Neisseria PilC beta-propeller domain AS145_19815 PF02401 LytB protein AS145_19820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS145_19825 PF01252 Signal peptidase (SPase) II AS145_19830 PF08264 Anticodon-binding domain of tRNA AS145_19830 PF06827 Zinc finger found in FPG and IleRS AS145_19830 PF00133 tRNA synthetases class I (I, L, M and V) AS145_19835 PF06574 FAD synthetase AS145_19835 PF01687 Riboflavin kinase AS145_19840 PF03023 Lipid II flippase MurJ AS145_19845 PF01649 Ribosomal protein S20 AS145_19850 PF01022 Bacterial regulatory protein, arsR family AS145_19855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_19855 PF03466 LysR substrate binding domain AS145_19865 PF06965 Na+/H+ antiporter 1 AS145_19870 PF00303 Thymidylate synthase AS145_19875 PF01790 Prolipoprotein diacylglyceryl transferase AS145_19880 PF02896 PEP-utilising enzyme, TIM barrel domain AS145_19880 PF00391 PEP-utilising enzyme, mobile domain AS145_19880 PF05524 PEP-utilising enzyme, N-terminal AS145_19880 PF01590 GAF domain AS145_19885 PF00293 NUDIX domain AS145_19890 PF02976 DNA mismatch repair enzyme MutH AS145_19900 PF01245 Ribosomal protein L19 AS145_19905 PF01746 tRNA (Guanine-1)-methyltransferase AS145_19910 PF05239 PRC-barrel domain AS145_19910 PF01782 RimM N-terminal domain AS145_19915 PF00886 Ribosomal protein S16 AS145_19920 PF00448 SRP54-type protein, GTPase domain AS145_19920 PF02881 SRP54-type protein, helical bundle domain AS145_19920 PF02978 Signal peptide binding domain AS145_19925 PF01578 Cytochrome C assembly protein AS145_19930 PF00571 CBS domain AS145_19930 PF03471 Transporter associated domain AS145_19930 PF01595 Cyclin M transmembrane N-terminal domain AS145_19935 PF02082 Transcriptional regulator AS145_19940 PF00042 Globin AS145_19940 PF00970 Oxidoreductase FAD-binding domain AS145_19940 PF00175 Oxidoreductase NAD-binding domain AS145_19945 PF08238 Sel1 repeat AS145_19950 PF00056 lactate/malate dehydrogenase, NAD binding domain AS145_19950 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AS145_19955 PF00528 Binding-protein-dependent transport system inner membrane component AS145_19960 PF00528 Binding-protein-dependent transport system inner membrane component AS145_19965 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS145_19970 PF00005 ABC transporter AS145_19975 PF02863 Arginine repressor, C-terminal domain AS145_19975 PF01316 Arginine repressor, DNA binding domain AS145_19980 PF04261 Dyp-type peroxidase family AS145_19985 PF00005 ABC transporter AS145_19985 PF08402 TOBE domain AS145_19995 PF13416 Bacterial extracellular solute-binding protein AS145_20000 PF00543 Nitrogen regulatory protein P-II AS145_20005 PF00472 RF-1 domain AS145_20010 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AS145_20010 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AS145_20015 PF07670 Nucleoside recognition AS145_20015 PF07662 Na+ dependent nucleoside transporter C-terminus AS145_20015 PF01773 Na+ dependent nucleoside transporter N-terminus AS145_20020 PF03466 LysR substrate binding domain AS145_20020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_20025 PF00255 Glutathione peroxidase AS145_20035 PF02595 Glycerate kinase family AS145_20040 PF02447 GntP family permease AS145_20045 PF17853 GGDEF-like domain AS145_20045 PF05651 Putative sugar diacid recognition AS145_20045 PF13556 PucR C-terminal helix-turn-helix domain AS145_20050 PF06062 Uncharacterised protein family (UPF0231) AS145_20065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_20065 PF08447 PAS fold AS145_20070 PF03372 Endonuclease/Exonuclease/phosphatase family AS145_20085 PF00271 Helicase conserved C-terminal domain AS145_20085 PF00270 DEAD/DEAH box helicase AS145_20095 PF08534 Redoxin AS145_20100 PF00403 Heavy-metal-associated domain AS145_20105 PF03714 Bacterial pullanase-associated domain AS145_20105 PF18494 Pullulanase Ins domain AS145_20105 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AS145_20105 PF11852 Domain of unknown function (DUF3372) AS145_20105 PF17967 Pullulanase N2 domain AS145_20120 PF02583 Metal-sensitive transcriptional repressor AS145_20125 PF00155 Aminotransferase class I and II AS145_20130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_20130 PF03466 LysR substrate binding domain AS145_20140 PF04055 Radical SAM superfamily AS145_20145 PF11230 Protein of unknown function (DUF3029) AS145_20165 PF14685 Tricorn protease PDZ domain AS145_20165 PF07676 WD40-like Beta Propeller Repeat AS145_20165 PF03572 Peptidase family S41 AS145_20165 PF14684 Tricorn protease C1 domain AS145_20195 PF12729 Four helix bundle sensory module for signal transduction AS145_20195 PF00672 HAMP domain AS145_20195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_20200 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AS145_20200 PF18416 N-acetylglucosamine binding protein domain 2 AS145_20205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_20205 PF03466 LysR substrate binding domain AS145_20210 PF12857 TOBE-like domain AS145_20210 PF00005 ABC transporter AS145_20215 PF00528 Binding-protein-dependent transport system inner membrane component AS145_20220 PF00528 Binding-protein-dependent transport system inner membrane component AS145_20235 PF13194 Domain of unknown function (DUF4010) AS145_20240 PF12464 Maltose acetyltransferase AS145_20240 PF14602 Hexapeptide repeat of succinyl-transferase AS145_20265 PF14698 Argininosuccinate lyase C-terminal AS145_20265 PF00206 Lyase AS145_20270 PF00764 Arginosuccinate synthase AS145_20275 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AS145_20275 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AS145_20280 PF00696 Amino acid kinase family AS145_20285 PF02774 Semialdehyde dehydrogenase, dimerisation domain AS145_20285 PF01118 Semialdehyde dehydrogenase, NAD binding domain AS145_20290 PF01546 Peptidase family M20/M25/M40 AS145_20290 PF07687 Peptidase dimerisation domain AS145_20295 PF00311 Phosphoenolpyruvate carboxylase AS145_20305 PF03447 Homoserine dehydrogenase, NAD binding domain AS145_20305 PF00742 Homoserine dehydrogenase AS145_20305 PF00696 Amino acid kinase family AS145_20310 PF01053 Cys/Met metabolism PLP-dependent enzyme AS145_20315 PF01340 Met Apo-repressor, MetJ AS145_20320 PF06445 GyrI-like small molecule binding domain AS145_20320 PF12833 Helix-turn-helix domain AS145_20325 PF01588 Putative tRNA binding domain AS145_20330 PF03222 Tryptophan/tyrosine permease family AS145_20335 PF00459 Inositol monophosphatase family AS145_20340 PF00293 NUDIX domain AS145_20345 PF13419 Haloacid dehalogenase-like hydrolase AS145_20350 PF00579 tRNA synthetases class I (W and Y) AS145_20350 PF01479 S4 domain AS145_20355 PF00196 Bacterial regulatory proteins, luxR family AS145_20360 PF01203 Type II secretion system (T2SS), protein N AS145_20365 PF04612 Type II secretion system (T2SS), protein M AS145_20370 PF12693 GspL periplasmic domain AS145_20370 PF05134 Type II secretion system (T2SS), protein L AS145_20375 PF03934 Type II secretion system (T2SS), protein K AS145_20380 PF11612 Type II secretion system (T2SS), protein J AS145_20380 PF07963 Prokaryotic N-terminal methylation motif AS145_20385 PF02501 Type II secretion system (T2SS), protein I AS145_20385 PF07963 Prokaryotic N-terminal methylation motif AS145_20390 PF07963 Prokaryotic N-terminal methylation motif AS145_20390 PF12019 Type II transport protein GspH AS145_20395 PF07963 Prokaryotic N-terminal methylation motif AS145_20395 PF08334 Type II secretion system (T2SS), protein G AS145_20400 PF00482 Type II secretion system (T2SS), protein F AS145_20405 PF00437 Type II/IV secretion system protein AS145_20410 PF03958 Bacterial type II/III secretion system short domain AS145_20410 PF00263 Bacterial type II and III secretion system protein AS145_20415 PF11356 Type II secretion system protein C AS145_20420 PF01479 S4 domain AS145_20425 PF01430 Hsp33 protein AS145_20435 PF00392 Bacterial regulatory proteins, gntR family AS145_20440 PF01321 Creatinase/Prolidase N-terminal domain AS145_20440 PF00557 Metallopeptidase family M24 AS145_20445 PF11756 Nitrous oxide-stimulated promoter AS145_20450 PF00583 Acetyltransferase (GNAT) family AS145_20455 PF05433 Glycine zipper 2TM domain AS145_20460 PF02872 5'-nucleotidase, C-terminal domain AS145_20460 PF00149 Calcineurin-like phosphoesterase AS145_20465 PF01810 LysE type translocator AS145_20470 PF03472 Autoinducer binding domain AS145_20470 PF00196 Bacterial regulatory proteins, luxR family AS145_20475 PF00765 Autoinducer synthase AS145_20480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_20480 PF03466 LysR substrate binding domain AS145_20485 PF17876 Cold shock domain AS145_20485 PF00773 RNB domain AS145_20485 PF08206 Ribonuclease B OB domain AS145_20490 PF00440 Bacterial regulatory proteins, tetR family AS145_20500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS145_20500 PF02378 Phosphotransferase system, EIIC AS145_20500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS145_20505 PF08125 Mannitol dehydrogenase C-terminal domain AS145_20505 PF01232 Mannitol dehydrogenase Rossmann domain AS145_20510 PF05068 Mannitol repressor AS145_20515 PF03471 Transporter associated domain AS145_20515 PF00999 Sodium/hydrogen exchanger family AS145_20515 PF02080 TrkA-C domain AS145_20535 PF01544 CorA-like Mg2+ transporter protein AS145_20540 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AS145_20555 PF04307 LexA-binding, inner membrane-associated putative hydrolase AS145_20560 PF07670 Nucleoside recognition AS145_20560 PF07662 Na+ dependent nucleoside transporter C-terminus AS145_20560 PF01773 Na+ dependent nucleoside transporter N-terminus AS145_20565 PF03880 DbpA RNA binding domain AS145_20565 PF00271 Helicase conserved C-terminal domain AS145_20565 PF00270 DEAD/DEAH box helicase AS145_20590 PF01040 UbiA prenyltransferase family AS145_20595 PF00425 chorismate binding enzyme AS145_20600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS145_20600 PF16582 Middle domain of thiamine pyrophosphate AS145_20600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS145_20605 PF12697 Alpha/beta hydrolase family AS145_20610 PF00378 Enoyl-CoA hydratase/isomerase AS145_20615 PF13378 Enolase C-terminal domain-like AS145_20620 PF00501 AMP-binding enzyme AS145_20630 PF00419 Fimbrial protein AS145_20635 PF00419 Fimbrial protein AS145_20640 PF02753 Pili assembly chaperone PapD, C-terminal domain AS145_20640 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AS145_20645 PF13953 PapC C-terminal domain AS145_20645 PF13954 PapC N-terminal domain AS145_20645 PF00577 Outer membrane usher protein AS145_20655 PF00419 Fimbrial protein AS145_20665 PF01752 Collagenase AS145_20665 PF08453 Peptidase family M9 N-terminal AS145_20670 PF02698 DUF218 domain AS145_20675 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AS145_20675 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AS145_20685 PF00561 alpha/beta hydrolase fold AS145_20690 PF03280 Proteobacterial lipase chaperone protein AS145_20705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS145_20705 PF12793 Sugar transport-related sRNA regulator N-term AS145_20710 PF01053 Cys/Met metabolism PLP-dependent enzyme AS145_20720 PF00465 Iron-containing alcohol dehydrogenase AS145_20735 PF03577 Peptidase family C69 AS145_20740 PF00106 short chain dehydrogenase AS145_20760 PF02308 MgtC family AS145_20765 PF00128 Alpha amylase, catalytic domain AS145_20765 PF16657 Maltogenic Amylase, C-terminal domain AS145_20765 PF02903 Alpha amylase, N-terminal ig-like domain AS145_20780 PF00884 Sulfatase AS145_20785 PF01037 Lrp/AsnC ligand binding domain AS145_20795 PF04204 Homoserine O-succinyltransferase AS145_20800 PF12072 Domain of unknown function (DUF3552) AS145_20800 PF00013 KH domain AS145_20800 PF01966 HD domain AS145_20805 PF02464 Competence-damaged protein AS145_20805 PF00994 Probable molybdopterin binding domain AS145_20820 PF00005 ABC transporter AS145_20840 PF07722 Peptidase C26 AS145_20850 PF13545 Crp-like helix-turn-helix domain AS145_20850 PF00027 Cyclic nucleotide-binding domain AS145_20860 PF13419 Haloacid dehalogenase-like hydrolase AS145_20865 PF02899 Phage integrase, N-terminal SAM-like domain AS145_20865 PF00589 Phage integrase family AS145_20875 PF01678 Diaminopimelate epimerase AS145_20880 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AS145_20880 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AS145_20885 PF01491 Frataxin-like domain AS145_20890 PF02230 Phospholipase/Carboxylesterase AS145_20895 PF01295 Adenylate cyclase, class-I AS145_20895 PF12633 Adenylate cyclase NT domain AS145_20900 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AS145_20900 PF03900 Porphobilinogen deaminase, C-terminal domain AS145_20905 PF02602 Uroporphyrinogen-III synthase HemD AS145_20910 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AS145_20920 PF03692 Putative zinc- or iron-chelating domain AS145_20925 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AS145_20940 PF07715 TonB-dependent Receptor Plug Domain AS145_20940 PF00593 TonB dependent receptor AS145_20965 PF01638 HxlR-like helix-turn-helix AS145_20970 PF08803 Putative mono-oxygenase ydhR AS145_20985 PF06055 Exopolysaccharide synthesis, ExoD AS145_20995 PF00990 Diguanylate cyclase, GGDEF domain AS145_20995 PF17151 Periplasmic sensor domain AS145_21010 PF13036 Peptidoglycan-synthase activator LpoB AS145_21020 PF04055 Radical SAM superfamily AS145_21020 PF06968 Biotin and Thiamin Synthesis associated domain AS145_21025 PF05690 Thiazole biosynthesis protein ThiG AS145_21035 PF00899 ThiF family AS145_21040 PF02581 Thiamine monophosphate synthase AS145_21045 PF13667 ThiC-associated domain AS145_21045 PF01964 Radical SAM ThiC family AS145_21050 PF03440 Aerolysin/Pertussis toxin (APT) domain AS145_21050 PF01117 Aerolysin toxin AS145_21065 PF00072 Response regulator receiver domain AS145_21065 PF00486 Transcriptional regulatory protein, C terminal AS145_21075 PF05525 Branched-chain amino acid transport protein AS145_21080 PF18030 RimK PreATP-grasp domain AS145_21080 PF08443 RimK-like ATP-grasp domain AS145_21085 PF02310 B12 binding domain AS145_21085 PF02574 Homocysteine S-methyltransferase AS145_21085 PF00809 Pterin binding enzyme AS145_21085 PF02607 B12 binding domain AS145_21085 PF02965 Vitamin B12 dependent methionine synthase, activation domain AS145_21090 PF00999 Sodium/hydrogen exchanger family AS145_21115 PF04320 Protein with unknown function (DUF469) AS145_21120 PF00419 Fimbrial protein AS145_21125 PF01389 OmpA-like transmembrane domain AS145_21125 PF00691 OmpA family AS145_21130 PF13953 PapC C-terminal domain AS145_21130 PF13954 PapC N-terminal domain AS145_21130 PF00577 Outer membrane usher protein AS145_21135 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AS145_21135 PF02753 Pili assembly chaperone PapD, C-terminal domain AS145_21155 PF00419 Fimbrial protein AS145_21180 PF08668 HDOD domain AS145_21190 PF04228 Putative neutral zinc metallopeptidase AS145_21195 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AS145_21210 PF13426 PAS domain AS145_21210 PF08447 PAS fold AS145_21210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS145_21215 PF08678 Rsbr N terminal AS145_21215 PF01740 STAS domain AS145_21220 PF13581 Histidine kinase-like ATPase domain AS145_21225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_21225 PF00512 His Kinase A (phospho-acceptor) domain AS145_21225 PF01627 Hpt domain AS145_21225 PF00672 HAMP domain AS145_21225 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AS145_21225 PF00072 Response regulator receiver domain AS145_21230 PF00072 Response regulator receiver domain AS145_21240 PF07690 Major Facilitator Superfamily AS145_21245 PF01914 MarC family integral membrane protein AS145_21255 PF13580 SIS domain AS145_21260 PF00367 phosphotransferase system, EIIB AS145_21260 PF02378 Phosphotransferase system, EIIC AS145_21275 PF01418 Helix-turn-helix domain, rpiR family AS145_21275 PF01380 SIS domain AS145_21280 PF01523 Putative modulator of DNA gyrase AS145_21285 PF00795 Carbon-nitrogen hydrolase AS145_21295 PF13116 Protein of unknown function AS145_21295 PF13502 AsmA-like C-terminal region AS145_21300 PF00575 S1 RNA binding domain AS145_21300 PF10150 Ribonuclease E/G family AS145_21305 PF02545 Maf-like protein AS145_21310 PF04093 rod shape-determining protein MreD AS145_21315 PF04085 rod shape-determining protein MreC AS145_21345 PF07963 Prokaryotic N-terminal methylation motif AS145_21345 PF14245 Type IV pilin PilA AS145_21350 PF00114 Pilin (bacterial filament) AS145_21350 PF07963 Prokaryotic N-terminal methylation motif AS145_21365 PF00482 Type II secretion system (T2SS), protein F AS145_21370 PF00437 Type II/IV secretion system protein AS145_21370 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AS145_21380 PF09077 Mu B transposition protein, C terminal AS145_21380 PF13401 AAA domain AS145_21385 PF00263 Bacterial type II and III secretion system protein AS145_21385 PF03958 Bacterial type II/III secretion system short domain AS145_21415 PF00990 Diguanylate cyclase, GGDEF domain AS145_21415 PF00563 EAL domain AS145_21415 PF17157 Gammaproteobacterial periplasmic sensor domain AS145_21420 PF00563 EAL domain AS145_21420 PF12792 CSS motif domain associated with EAL AS145_21425 PF01699 Sodium/calcium exchanger protein AS145_21430 PF00221 Aromatic amino acid lyase AS145_21435 PF17391 Urocanase N-terminal domain AS145_21435 PF01175 Urocanase Rossmann-like domain AS145_21435 PF17392 Urocanase C-terminal domain AS145_21440 PF00491 Arginase family AS145_21445 PF01979 Amidohydrolase family AS145_21450 PF00392 Bacterial regulatory proteins, gntR family AS145_21450 PF07702 UTRA domain AS145_21455 PF00484 Carbonic anhydrase AS145_21460 PF04545 Sigma-70, region 4 AS145_21460 PF04542 Sigma-70 region 2 AS145_21460 PF00140 Sigma-70 factor, region 1.2 AS145_21465 PF18075 FtsX extracellular domain AS145_21470 PF00005 ABC transporter AS145_21475 PF02881 SRP54-type protein, helical bundle domain AS145_21475 PF00448 SRP54-type protein, GTPase domain AS145_21495 PF00440 Bacterial regulatory proteins, tetR family AS145_21505 PF13091 PLD-like domain AS145_21510 PF01464 Transglycosylase SLT domain AS145_21520 PF02416 mttA/Hcf106 family AS145_21525 PF03466 LysR substrate binding domain AS145_21525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_21530 PF01914 MarC family integral membrane protein AS145_21535 PF10678 Protein of unknown function (DUF2492) AS145_21540 PF00375 Sodium:dicarboxylate symporter family AS145_21550 PF03466 LysR substrate binding domain AS145_21550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_21555 PF13533 Biotin-lipoyl like AS145_21560 PF07690 Major Facilitator Superfamily AS145_21565 PF07947 YhhN family AS145_21580 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AS145_21580 PF00326 Prolyl oligopeptidase family AS145_21595 PF00106 short chain dehydrogenase AS145_21600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_21600 PF03466 LysR substrate binding domain AS145_21605 PF02525 Flavodoxin-like fold AS145_21610 PF02254 TrkA-N domain AS145_21610 PF00999 Sodium/hydrogen exchanger family AS145_21650 PF01196 Ribosomal protein L17 AS145_21655 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AS145_21655 PF01000 RNA polymerase Rpb3/RpoA insert domain AS145_21655 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AS145_21660 PF01479 S4 domain AS145_21660 PF00163 Ribosomal protein S4/S9 N-terminal domain AS145_21665 PF00411 Ribosomal protein S11 AS145_21670 PF00416 Ribosomal protein S13/S18 AS145_21675 PF00344 SecY translocase AS145_21680 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AS145_21685 PF00333 Ribosomal protein S5, N-terminal domain AS145_21685 PF03719 Ribosomal protein S5, C-terminal domain AS145_21690 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AS145_21695 PF00347 Ribosomal protein L6 AS145_21700 PF00410 Ribosomal protein S8 AS145_21705 PF00253 Ribosomal protein S14p/S29e AS145_21710 PF00281 Ribosomal protein L5 AS145_21710 PF00673 ribosomal L5P family C-terminus AS145_21715 PF00467 KOW motif AS145_21715 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AS145_21720 PF00238 Ribosomal protein L14p/L23e AS145_21725 PF00366 Ribosomal protein S17 AS145_21730 PF00831 Ribosomal L29 protein AS145_21735 PF00252 Ribosomal protein L16p/L10e AS145_21740 PF07650 KH domain AS145_21740 PF00189 Ribosomal protein S3, C-terminal domain AS145_21745 PF00237 Ribosomal protein L22p/L17e AS145_21750 PF00203 Ribosomal protein S19 AS145_21755 PF03947 Ribosomal Proteins L2, C-terminal domain AS145_21755 PF00181 Ribosomal Proteins L2, RNA binding domain AS145_21760 PF00276 Ribosomal protein L23 AS145_21765 PF00573 Ribosomal protein L4/L1 family AS145_21770 PF00297 Ribosomal protein L3 AS145_21775 PF00338 Ribosomal protein S10p/S20e AS145_21785 PF00512 His Kinase A (phospho-acceptor) domain AS145_21785 PF00672 HAMP domain AS145_21785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_21790 PF00072 Response regulator receiver domain AS145_21790 PF00486 Transcriptional regulatory protein, C terminal AS145_21795 PF03449 Transcription elongation factor, N-terminal AS145_21795 PF01272 Transcription elongation factor, GreA/GreB, C-term AS145_21800 PF17674 HHH domain AS145_21800 PF16921 Tex protein YqgF-like domain AS145_21800 PF09371 Tex-like protein N-terminal domain AS145_21800 PF00575 S1 RNA binding domain AS145_21820 PF00561 alpha/beta hydrolase fold AS145_21825 PF00156 Phosphoribosyl transferase domain AS145_21830 PF01521 Iron-sulphur cluster biosynthesis AS145_21830 PF01106 NifU-like domain AS145_21835 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AS145_21835 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AS145_21840 PF02556 Preprotein translocase subunit SecB AS145_21845 PF00581 Rhodanese-like domain AS145_21850 PF01676 Metalloenzyme superfamily AS145_21850 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AS145_21855 PF01551 Peptidase family M23 AS145_21865 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AS145_21865 PF00356 Bacterial regulatory proteins, lacI family AS145_21870 PF01081 KDPG and KHG aldolase AS145_21875 PF00920 Dehydratase family AS145_21880 PF01202 Shikimate kinase AS145_21885 PF02447 GntP family permease AS145_21890 PF13091 PLD-like domain AS145_21895 PF00270 DEAD/DEAH box helicase AS145_21895 PF17191 RecG wedge domain AS145_21895 PF00271 Helicase conserved C-terminal domain AS145_21905 PF00583 Acetyltransferase (GNAT) family AS145_21905 PF09500 Putative thioesterase (yiiD_Cterm) AS145_21915 PF02580 D-Tyr-tRNA(Tyr) deacylase AS145_21920 PF03631 Virulence factor BrkB AS145_21930 PF03951 Glutamine synthetase, beta-Grasp domain AS145_21930 PF00120 Glutamine synthetase, catalytic domain AS145_21940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_21940 PF00989 PAS fold AS145_21940 PF00512 His Kinase A (phospho-acceptor) domain AS145_21945 PF00072 Response regulator receiver domain AS145_21945 PF00158 Sigma-54 interaction domain AS145_21945 PF02954 Bacterial regulatory protein, Fis family AS145_21950 PF00962 Adenosine/AMP deaminase AS145_21955 PF04055 Radical SAM superfamily AS145_21955 PF06969 HemN C-terminal domain AS145_21960 PF10675 Protein of unknown function (DUF2489) AS145_21965 PF04220 Der GTPase activator (YihI) AS145_21975 PF00034 Cytochrome c AS145_21980 PF01926 50S ribosome-binding GTPase AS145_21985 PF07369 Protein of unknown function (DUF1488) AS145_21990 PF01488 Shikimate / quinate 5-dehydrogenase AS145_21990 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AS145_21990 PF08501 Shikimate dehydrogenase substrate binding domain AS145_21995 PF01218 Coproporphyrinogen III oxidase AS145_22000 PF01300 Telomere recombination AS145_22005 PF00731 AIR carboxylase AS145_22010 PF01396 Topoisomerase DNA binding C4 zinc finger AS145_22015 PF04361 Protein of unknown function (DUF494) AS145_22020 PF17782 DprA winged helix domain AS145_22020 PF02481 DNA recombination-mediator protein A AS145_22030 PF01327 Polypeptide deformylase AS145_22035 PF00551 Formyl transferase AS145_22035 PF02911 Formyl transferase, C-terminal domain AS145_22040 PF01029 NusB family AS145_22040 PF01189 16S rRNA methyltransferase RsmB/F AS145_22045 PF02254 TrkA-N domain AS145_22045 PF02080 TrkA-C domain AS145_22050 PF02386 Cation transport protein AS145_22055 PF02646 RmuC family AS145_22070 PF02082 Transcriptional regulator AS145_22075 PF00294 pfkB family carbohydrate kinase AS145_22080 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AS145_22080 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AS145_22085 PF00117 Glutamine amidotransferase class-I AS145_22085 PF00958 GMP synthase C terminal domain AS145_22085 PF02540 NAD synthase AS145_22095 PF00202 Aminotransferase class-III AS145_22100 PF07883 Cupin domain AS145_22100 PF01381 Helix-turn-helix AS145_22105 PF00171 Aldehyde dehydrogenase family AS145_22115 PF00892 EamA-like transporter family AS145_22120 PF12833 Helix-turn-helix domain AS145_22125 PF01810 LysE type translocator AS145_22130 PF00689 Cation transporting ATPase, C-terminus AS145_22130 PF00690 Cation transporter/ATPase, N-terminus AS145_22135 PF04143 Sulphur transport AS145_22140 PF01810 LysE type translocator AS145_22150 PF06206 CpeT/CpcT family (DUF1001) AS145_22175 PF14001 YdfZ protein AS145_22185 PF03466 LysR substrate binding domain AS145_22185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_22195 PF13361 UvrD-like helicase C-terminal domain AS145_22195 PF00580 UvrD/REP helicase N-terminal domain AS145_22220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_22220 PF03466 LysR substrate binding domain AS145_22225 PF08240 Alcohol dehydrogenase GroES-like domain AS145_22225 PF00107 Zinc-binding dehydrogenase AS145_22230 PF00756 Putative esterase AS145_22240 PF12867 DinB superfamily AS145_22240 PF03781 Sulfatase-modifying factor enzyme 1 AS145_22245 PF13593 SBF-like CPA transporter family (DUF4137) AS145_22250 PF13520 Amino acid permease AS145_22255 PF01588 Putative tRNA binding domain AS145_22260 PF13520 Amino acid permease AS145_22265 PF04074 YhcH/YjgK/YiaL AS145_22270 PF02929 Beta galactosidase small chain AS145_22270 PF16353 Domain of unknown function(DUF4981) AS145_22270 PF02837 Glycosyl hydrolases family 2, sugar binding domain AS145_22270 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AS145_22270 PF00703 Glycosyl hydrolases family 2 AS145_22275 PF00356 Bacterial regulatory proteins, lacI family AS145_22310 PF00132 Bacterial transferase hexapeptide (six repeats) AS145_22315 PF01367 5'-3' exonuclease, C-terminal SAM fold AS145_22315 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AS145_22315 PF00476 DNA polymerase family A AS145_22315 PF01612 3'-5' exonuclease AS145_22325 PF06005 Cell division protein ZapB AS145_22335 PF00132 Bacterial transferase hexapeptide (six repeats) AS145_22335 PF06426 Serine acetyltransferase, N-terminal AS145_22340 PF01545 Cation efflux family AS145_22340 PF16916 Dimerisation domain of Zinc Transporter AS145_22345 PF00072 Response regulator receiver domain AS145_22345 PF00486 Transcriptional regulatory protein, C terminal AS145_22350 PF00512 His Kinase A (phospho-acceptor) domain AS145_22350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_22350 PF00672 HAMP domain AS145_22350 PF16527 Two-component sensor protein CpxA, periplasmic domain AS145_22355 PF00588 SpoU rRNA Methylase family AS145_22360 PF01554 MatE AS145_22365 PF02630 SCO1/SenC AS145_22375 PF01726 LexA DNA binding domain AS145_22375 PF00717 Peptidase S24-like AS145_22380 PF01553 Acyltransferase AS145_22385 PF01040 UbiA prenyltransferase family AS145_22390 PF04345 Chorismate lyase AS145_22395 PF03748 Flagellar basal body-associated protein FliL AS145_22405 PF08240 Alcohol dehydrogenase GroES-like domain AS145_22405 PF00107 Zinc-binding dehydrogenase AS145_22410 PF00356 Bacterial regulatory proteins, lacI family AS145_22410 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AS145_22415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS145_22425 PF03611 PTS system sugar-specific permease component AS145_22430 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AS145_22435 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AS145_22440 PF00535 Glycosyl transferase family 2 AS145_22445 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AS145_22450 PF01467 Cytidylyltransferase-like AS145_22455 PF04393 Protein of unknown function (DUF535) AS145_22460 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AS145_22460 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AS145_22460 PF06827 Zinc finger found in FPG and IleRS AS145_22470 PF00471 Ribosomal protein L33 AS145_22475 PF04002 RadC-like JAB domain AS145_22480 PF04127 DNA / pantothenate metabolism flavoprotein AS145_22480 PF02441 Flavoprotein AS145_22485 PF00692 dUTPase AS145_22490 PF00440 Bacterial regulatory proteins, tetR family AS145_22495 PF00924 Mechanosensitive ion channel AS145_22495 PF05552 Conserved TM helix AS145_22505 PF00342 Phosphoglucose isomerase AS145_22510 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AS145_22510 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AS145_22515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS145_22515 PF03466 LysR substrate binding domain AS145_22530 PF00583 Acetyltransferase (GNAT) family AS145_22530 PF13380 CoA binding domain AS145_22530 PF13607 Succinyl-CoA ligase like flavodoxin domain AS145_22555 PF12724 Flavodoxin domain AS145_22560 PF02386 Cation transport protein AS145_22565 PF01205 Uncharacterized protein family UPF0029 AS145_22565 PF09186 Domain of unknown function (DUF1949) AS145_22570 PF00557 Metallopeptidase family M24 AS145_22575 PF00501 AMP-binding enzyme AS145_22575 PF13193 AMP-binding enzyme C-terminal domain AS145_22580 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AS145_22580 PF00378 Enoyl-CoA hydratase/isomerase AS145_22580 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AS145_22585 PF02803 Thiolase, C-terminal domain AS145_22585 PF00108 Thiolase, N-terminal domain AS145_22590 PF00486 Transcriptional regulatory protein, C terminal AS145_22590 PF00072 Response regulator receiver domain AS145_22595 PF00512 His Kinase A (phospho-acceptor) domain AS145_22595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_22595 PF00672 HAMP domain AS145_22600 PF01547 Bacterial extracellular solute-binding protein AS145_22610 PF01206 Sulfurtransferase TusA AS145_22615 PF01042 Endoribonuclease L-PSP AS145_22620 PF00691 OmpA family AS145_22620 PF13488 Glycine zipper AS145_22625 PF00857 Isochorismatase family AS145_22630 PF03352 Methyladenine glycosylase AS145_22635 PF02091 Glycyl-tRNA synthetase alpha subunit AS145_22640 PF02092 Glycyl-tRNA synthetase beta subunit AS145_22640 PF05746 DALR anticodon binding domain AS145_22655 PF14306 PUA-like domain AS145_22655 PF01747 ATP-sulfurylase AS145_22675 PF03222 Tryptophan/tyrosine permease family AS145_22680 PF12801 4Fe-4S binding domain AS145_22690 PF18113 Rubredoxin binding C-terminal domain AS145_22690 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS145_22695 PF00258 Flavodoxin AS145_22695 PF00753 Metallo-beta-lactamase superfamily AS145_22695 PF00301 Rubredoxin AS145_22700 PF00158 Sigma-54 interaction domain AS145_22700 PF01590 GAF domain AS145_22705 PF07702 UTRA domain AS145_22705 PF00392 Bacterial regulatory proteins, gntR family AS145_22710 PF02378 Phosphotransferase system, EIIC AS145_22710 PF00367 phosphotransferase system, EIIB AS145_22715 PF02056 Family 4 glycosyl hydrolase AS145_22715 PF11975 Family 4 glycosyl hydrolase C-terminal domain AS145_22720 PF00356 Bacterial regulatory proteins, lacI family AS145_22725 PF13458 Periplasmic binding protein AS145_22730 PF02653 Branched-chain amino acid transport system / permease component AS145_22735 PF02653 Branched-chain amino acid transport system / permease component AS145_22735 PF11862 Domain of unknown function (DUF3382) AS145_22740 PF12399 Branched-chain amino acid ATP-binding cassette transporter AS145_22740 PF00005 ABC transporter AS145_22745 PF00005 ABC transporter AS145_22760 PF00581 Rhodanese-like domain AS145_22765 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AS145_22765 PF01694 Rhomboid family AS145_22770 PF12262 Bacterial virulence factor lipase N-terminal AS145_22775 PF04380 Membrane fusogenic activity AS145_22780 PF00175 Oxidoreductase NAD-binding domain AS145_22785 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AS145_22795 PF07498 Rho termination factor, N-terminal domain AS145_22795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS145_22795 PF07497 Rho termination factor, RNA-binding domain AS145_22800 PF00085 Thioredoxin AS145_22805 PF00270 DEAD/DEAH box helicase AS145_22805 PF00271 Helicase conserved C-terminal domain AS145_22810 PF02541 Ppx/GppA phosphatase family AS145_22825 PF04445 Putative SAM-dependent methyltransferase AS145_22830 PF00990 Diguanylate cyclase, GGDEF domain AS145_22830 PF00563 EAL domain AS145_22830 PF03707 Bacterial signalling protein N terminal repeat AS145_22835 PF01432 Peptidase family M3 AS145_22840 PF00490 Delta-aminolevulinic acid dehydratase AS145_22845 PF01026 TatD related DNase AS145_22850 PF00902 Sec-independent protein translocase protein (TatC) AS145_22855 PF02416 mttA/Hcf106 family AS145_22860 PF02416 mttA/Hcf106 family AS145_22865 PF03109 ABC1 family AS145_22870 PF02036 SCP-2 sterol transfer family AS145_22875 PF01209 ubiE/COQ5 methyltransferase family AS145_22880 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AS145_22885 PF07969 Amidohydrolase family AS145_22925 PF03544 Gram-negative bacterial TonB protein C-terminal AS145_22930 PF02472 Biopolymer transport protein ExbD/TolR AS145_22935 PF01618 MotA/TolQ/ExbB proton channel family AS145_22940 PF01618 MotA/TolQ/ExbB proton channel family AS145_22950 PF00196 Bacterial regulatory proteins, luxR family AS145_22950 PF03472 Autoinducer binding domain AS145_22955 PF01380 SIS domain AS145_22960 PF00455 DeoR C terminal sensor domain AS145_22960 PF08220 DeoR-like helix-turn-helix domain AS145_22965 PF00072 Response regulator receiver domain AS145_22965 PF00486 Transcriptional regulatory protein, C terminal AS145_22970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS145_22970 PF00672 HAMP domain AS145_22970 PF00512 His Kinase A (phospho-acceptor) domain AS145_22975 PF00905 Penicillin binding protein transpeptidase domain AS145_22980 PF06123 Inner membrane protein CreD AS145_22985 PF00132 Bacterial transferase hexapeptide (six repeats) AS145_22985 PF14602 Hexapeptide repeat of succinyl-transferase AS145_22985 PF12804 MobA-like NTP transferase domain AS145_22990 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AS145_22990 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AS145_22995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS145_22995 PF02874 ATP synthase alpha/beta family, beta-barrel domain AS145_23000 PF00231 ATP synthase AS145_23005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS145_23005 PF00306 ATP synthase alpha/beta chain, C terminal domain AS145_23005 PF02874 ATP synthase alpha/beta family, beta-barrel domain AS145_23010 PF00213 ATP synthase delta (OSCP) subunit AS145_23015 PF00430 ATP synthase B/B' CF(0) AS145_23020 PF00137 ATP synthase subunit C AS145_23025 PF00119 ATP synthase A chain AS145_23035 PF02195 ParB-like nuclease domain AS145_23035 PF17762 HTH domain found in ParB protein AS145_23040 PF13614 AAA domain AS145_23045 PF02527 rRNA small subunit methyltransferase G AS145_23050 PF01134 Glucose inhibited division protein A AS145_23050 PF13932 GidA associated domain AS145_23055 PF00258 Flavodoxin AS145_23060 PF07715 TonB-dependent Receptor Plug Domain AS145_23060 PF00593 TonB dependent receptor AS145_23065 PF00005 ABC transporter AS145_23070 PF00005 ABC transporter AS145_23080 PF01032 FecCD transport family AS145_23085 PF01926 50S ribosome-binding GTPase AS145_23085 PF12631 MnmE helical domain AS145_23085 PF10396 GTP-binding protein TrmE N-terminus AS145_23090 PF02096 60Kd inner membrane protein AS145_23090 PF14849 YidC periplasmic domain AS145_23095 PF00825 Ribonuclease P AS145_23100 PF00468 Ribosomal protein L34 AS145_23110 PF00528 Binding-protein-dependent transport system inner membrane component AS145_23115 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS145_23170 PF02706 Chain length determinant protein AS145_23200 PF01076 Plasmid recombination enzyme AS145_23200 PF13154 Protein of unknown function (DUF3991) AS145_23225 PF13614 AAA domain