locus-tag class description MKW86_00005 PF00308 Bacterial dnaA protein MKW86_00005 PF08299 Bacterial dnaA protein helix-turn-helix MKW86_00005 PF11638 DnaA N-terminal domain MKW86_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain MKW86_00010 PF02767 DNA polymerase III beta subunit, central domain MKW86_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain MKW86_00015 PF02463 RecF/RecN/SMC N terminal domain MKW86_00020 PF01751 Toprim domain MKW86_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_00020 PF00986 DNA gyrase B subunit, carboxyl terminus MKW86_00020 PF00204 DNA gyrase B MKW86_00020 PF18053 DNA gyrase B subunit insert domain MKW86_00030 PF08279 HTH domain MKW86_00030 PF13280 WYL domain MKW86_00035 PF00011 Hsp20/alpha crystallin family MKW86_00040 PF00011 Hsp20/alpha crystallin family MKW86_00045 PF00155 Aminotransferase class I and II MKW86_00060 PF07690 Major Facilitator Superfamily MKW86_00065 PF00072 Response regulator receiver domain MKW86_00065 PF00486 Transcriptional regulatory protein, C terminal MKW86_00070 PF13493 Domain of unknown function (DUF4118) MKW86_00070 PF13492 GAF domain MKW86_00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_00070 PF00512 His Kinase A (phospho-acceptor) domain MKW86_00070 PF02702 Osmosensitive K+ channel His kinase sensor domain MKW86_00075 PF02669 K+-transporting ATPase, c chain MKW86_00085 PF03814 Potassium-transporting ATPase A subunit MKW86_00090 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKW86_00090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MKW86_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_00095 PF00512 His Kinase A (phospho-acceptor) domain MKW86_00095 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKW86_00100 PF00873 AcrB/AcrD/AcrF family MKW86_00105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKW86_00110 PF00440 Bacterial regulatory proteins, tetR family MKW86_00140 PF00224 Pyruvate kinase, barrel domain MKW86_00140 PF02887 Pyruvate kinase, alpha/beta domain MKW86_00145 PF07690 Major Facilitator Superfamily MKW86_00155 PF00672 HAMP domain MKW86_00155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_00155 PF00512 His Kinase A (phospho-acceptor) domain MKW86_00160 PF02954 Bacterial regulatory protein, Fis family MKW86_00160 PF00072 Response regulator receiver domain MKW86_00160 PF14532 Sigma-54 interaction domain MKW86_00175 PF12146 Serine aminopeptidase, S33 MKW86_00180 PF12105 SpoU, rRNA methylase, C-terminal MKW86_00180 PF00588 SpoU rRNA Methylase family MKW86_00185 PF04607 Region found in RelA / SpoT proteins MKW86_00185 PF13291 ACT domain MKW86_00185 PF02824 TGS domain MKW86_00190 PF01192 RNA polymerase Rpb6 MKW86_00195 PF00625 Guanylate kinase MKW86_00200 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MKW86_00215 PF00892 EamA-like transporter family MKW86_00235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_00235 PF03466 LysR substrate binding domain MKW86_00240 PF00579 tRNA synthetases class I (W and Y) MKW86_00245 PF00582 Universal stress protein family MKW86_00255 PF07055 Enoyl reductase FAD binding domain MKW86_00255 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase MKW86_00255 PF12241 Trans-2-enoyl-CoA reductase catalytic region MKW86_00260 PF00990 Diguanylate cyclase, GGDEF domain MKW86_00265 PF00210 Ferritin-like domain MKW86_00275 PF07690 Major Facilitator Superfamily MKW86_00280 PF01810 LysE type translocator MKW86_00295 PF15976 CS1-pili formation C-terminal MKW86_00295 PF16967 E-set like domain MKW86_00300 PF18649 EcpB C-terminal domain MKW86_00305 PF16449 Fimbrillin MatB MKW86_00310 PF00072 Response regulator receiver domain MKW86_00310 PF00196 Bacterial regulatory proteins, luxR family MKW86_00315 PF01627 Hpt domain MKW86_00315 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKW86_00315 PF00989 PAS fold MKW86_00315 PF00072 Response regulator receiver domain MKW86_00315 PF00512 His Kinase A (phospho-acceptor) domain MKW86_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_00325 PF06580 Histidine kinase MKW86_00325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_00325 PF07694 5TMR of 5TMR-LYT MKW86_00330 PF00072 Response regulator receiver domain MKW86_00330 PF04397 LytTr DNA-binding domain MKW86_00335 PF07690 Major Facilitator Superfamily MKW86_00340 PF02222 ATP-grasp domain MKW86_00340 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MKW86_00345 PF00731 AIR carboxylase MKW86_00360 PF03466 LysR substrate binding domain MKW86_00360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_00365 PF00593 TonB dependent receptor MKW86_00365 PF07715 TonB-dependent Receptor Plug Domain MKW86_00370 PF01177 Asp/Glu/Hydantoin racemase MKW86_00405 PF00899 ThiF family MKW86_00410 PF02657 Fe-S metabolism associated domain MKW86_00415 PF00266 Aminotransferase class-V MKW86_00420 PF13361 UvrD-like helicase C-terminal domain MKW86_00420 PF00580 UvrD/REP helicase N-terminal domain MKW86_00425 PF00990 Diguanylate cyclase, GGDEF domain MKW86_00425 PF03707 Bacterial signalling protein N terminal repeat MKW86_00425 PF00563 EAL domain MKW86_00430 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MKW86_00435 PF00107 Zinc-binding dehydrogenase MKW86_00435 PF08240 Alcohol dehydrogenase GroES-like domain MKW86_00440 PF00155 Aminotransferase class I and II MKW86_00445 PF08360 QacR-like protein, C-terminal region MKW86_00445 PF00440 Bacterial regulatory proteins, tetR family MKW86_00450 PF01370 NAD dependent epimerase/dehydratase family MKW86_00465 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) MKW86_00485 PF03755 YicC-like family, N-terminal region MKW86_00485 PF08340 Domain of unknown function (DUF1732) MKW86_00490 PF01138 3' exoribonuclease family, domain 1 MKW86_00490 PF03725 3' exoribonuclease family, domain 2 MKW86_00495 PF00156 Phosphoribosyl transferase domain MKW86_00500 PF00403 Heavy-metal-associated domain MKW86_00505 PF09278 MerR, DNA binding MKW86_00505 PF00376 MerR family regulatory protein MKW86_00510 PF00990 Diguanylate cyclase, GGDEF domain MKW86_00510 PF01590 GAF domain MKW86_00510 PF00563 EAL domain MKW86_00510 PF00360 Phytochrome region MKW86_00515 PF06288 Protein of unknown function (DUF1040) MKW86_00520 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase MKW86_00520 PF13746 4Fe-4S dicluster domain MKW86_00520 PF12801 4Fe-4S binding domain MKW86_00525 PF01636 Phosphotransferase enzyme family MKW86_00530 PF01323 DSBA-like thioredoxin domain MKW86_00535 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain MKW86_00535 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family MKW86_00540 PF00857 Isochorismatase family MKW86_00555 PF01553 Acyltransferase MKW86_00560 PF01553 Acyltransferase MKW86_00565 PF13335 Magnesium chelatase, subunit ChlI C-terminal MKW86_00565 PF01078 Magnesium chelatase, subunit ChlI MKW86_00570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MKW86_00570 PF00205 Thiamine pyrophosphate enzyme, central domain MKW86_00570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MKW86_00580 PF01063 Amino-transferase class IV MKW86_00585 PF00920 Dehydratase family MKW86_00590 PF00291 Pyridoxal-phosphate dependent enzyme MKW86_00590 PF00585 C-terminal regulatory domain of Threonine dehydratase MKW86_00595 PF00691 OmpA family MKW86_00595 PF01389 OmpA-like transmembrane domain MKW86_00605 PF00270 DEAD/DEAH box helicase MKW86_00605 PF00271 Helicase conserved C-terminal domain MKW86_00605 PF17764 3′ DNA-binding domain (3′BD) MKW86_00605 PF18074 Primosomal protein N C-terminal domain MKW86_00605 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MKW86_00610 PF01197 Ribosomal protein L31 MKW86_00615 PF13460 NAD(P)H-binding MKW86_00615 PF11066 Protein of unknown function (DUF2867) MKW86_00620 PF00390 Malic enzyme, N-terminal domain MKW86_00620 PF03949 Malic enzyme, NAD binding domain MKW86_00630 PF00672 HAMP domain MKW86_00630 PF00512 His Kinase A (phospho-acceptor) domain MKW86_00630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_00635 PF00486 Transcriptional regulatory protein, C terminal MKW86_00635 PF00072 Response regulator receiver domain MKW86_00640 PF05958 tRNA (Uracil-5-)-methyltransferase MKW86_00655 PF02903 Alpha amylase, N-terminal ig-like domain MKW86_00655 PF00128 Alpha amylase, catalytic domain MKW86_00670 PF00012 Hsp70 protein MKW86_00675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKW86_00675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKW86_00680 PF05981 CreA protein MKW86_00695 PF01258 Prokaryotic dksA/traR C4-type zinc finger MKW86_00700 PF00120 Glutamine synthetase, catalytic domain MKW86_00705 PF00202 Aminotransferase class-III MKW86_00710 PF13416 Bacterial extracellular solute-binding protein MKW86_00715 PF13416 Bacterial extracellular solute-binding protein MKW86_00720 PF00005 ABC transporter MKW86_00720 PF08402 TOBE domain MKW86_00725 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_00730 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_00735 PF03475 3-alpha domain MKW86_00735 PF03473 MOSC domain MKW86_00750 PF03061 Thioesterase superfamily MKW86_00755 PF00270 DEAD/DEAH box helicase MKW86_00755 PF00271 Helicase conserved C-terminal domain MKW86_00755 PF00570 HRDC domain MKW86_00755 PF16124 RecQ zinc-binding MKW86_00755 PF09382 RQC domain MKW86_00760 PF00034 Cytochrome c MKW86_00765 PF02696 Uncharacterized ACR, YdiU/UPF0061 family MKW86_00775 PF02592 Putative vitamin uptake transporter MKW86_00780 PF03737 Aldolase/RraA MKW86_00785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_00785 PF00672 HAMP domain MKW86_00790 PF00571 CBS domain MKW86_00790 PF01769 Divalent cation transporter MKW86_00790 PF03448 MgtE intracellular N domain MKW86_00795 PF14824 Sirohaem biosynthesis protein central MKW86_00795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MKW86_00795 PF10414 Sirohaem synthase dimerisation region MKW86_00800 PF01226 Formate/nitrite transporter MKW86_00805 PF13806 Rieske-like [2Fe-2S] domain MKW86_00815 PF04324 BFD-like [2Fe-2S] binding domain MKW86_00815 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MKW86_00815 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MKW86_00815 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKW86_00815 PF18267 Rubredoxin NAD+ reductase C-terminal domain MKW86_00820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_00820 PF03466 LysR substrate binding domain MKW86_00825 PF07690 Major Facilitator Superfamily MKW86_00830 PF00004 ATPase family associated with various cellular activities (AAA) MKW86_00830 PF07724 AAA domain (Cdc48 subfamily) MKW86_00830 PF10431 C-terminal, D2-small domain, of ClpB protein MKW86_00835 PF00227 Proteasome subunit MKW86_00845 PF03485 Arginyl tRNA synthetase N terminal domain MKW86_00845 PF05746 DALR anticodon binding domain MKW86_00845 PF00750 tRNA synthetases class I (R) MKW86_00855 PF04545 Sigma-70, region 4 MKW86_00855 PF04542 Sigma-70 region 2 MKW86_00860 PF12973 ChrR Cupin-like domain MKW86_00870 PF02673 Bacitracin resistance protein BacA MKW86_00875 PF00248 Aldo/keto reductase family MKW86_00880 PF01263 Aldose 1-epimerase MKW86_00885 PF10509 Galactokinase galactose-binding signature MKW86_00885 PF08544 GHMP kinases C terminal MKW86_00885 PF00288 GHMP kinases N terminal domain MKW86_00890 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain MKW86_00890 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain MKW86_00895 PF16363 GDP-mannose 4,6 dehydratase MKW86_00900 PF00356 Bacterial regulatory proteins, lacI family MKW86_00905 PF02929 Beta galactosidase small chain MKW86_00905 PF16353 Domain of unknown function(DUF4981) MKW86_00905 PF02837 Glycosyl hydrolases family 2, sugar binding domain MKW86_00905 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MKW86_00905 PF00703 Glycosyl hydrolases family 2 MKW86_00910 PF13407 Periplasmic binding protein domain MKW86_00915 PF00005 ABC transporter MKW86_00920 PF02653 Branched-chain amino acid transport system / permease component MKW86_00950 PF00696 Amino acid kinase family MKW86_00955 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MKW86_00955 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MKW86_00960 PF03606 C4-dicarboxylate anaerobic carrier MKW86_00965 PF02863 Arginine repressor, C-terminal domain MKW86_00965 PF01316 Arginine repressor, DNA binding domain MKW86_00970 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain MKW86_00970 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain MKW86_00975 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MKW86_00975 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MKW86_00995 PF02666 Phosphatidylserine decarboxylase MKW86_01000 PF02743 Cache domain MKW86_01000 PF00672 HAMP domain MKW86_01000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_01005 PF08212 Lipocalin-like domain MKW86_01010 PF12833 Helix-turn-helix domain MKW86_01010 PF06719 AraC-type transcriptional regulator N-terminus MKW86_01015 PF00465 Iron-containing alcohol dehydrogenase MKW86_01020 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MKW86_01020 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MKW86_01020 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch MKW86_01025 PF02233 NAD(P) transhydrogenase beta subunit MKW86_01035 PF03313 Serine dehydratase alpha chain MKW86_01040 PF00375 Sodium:dicarboxylate symporter family MKW86_01045 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKW86_01045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MKW86_01050 PF13525 Outer membrane lipoprotein MKW86_01055 PF00849 RNA pseudouridylate synthase MKW86_01055 PF01479 S4 domain MKW86_01060 PF02578 Multi-copper polyphenol oxidoreductase laccase MKW86_01065 PF02861 Clp amino terminal domain, pathogenicity island component MKW86_01065 PF10431 C-terminal, D2-small domain, of ClpB protein MKW86_01065 PF17871 AAA lid domain MKW86_01065 PF07724 AAA domain (Cdc48 subfamily) MKW86_01065 PF00004 ATPase family associated with various cellular activities (AAA) MKW86_01075 PF03590 Aspartate-ammonia ligase MKW86_01080 PF01037 Lrp/AsnC ligand binding domain MKW86_01090 PF10063 Uncharacterized integral membrane protein (DUF2301) MKW86_01095 PF00571 CBS domain MKW86_01095 PF00478 IMP dehydrogenase / GMP reductase domain MKW86_01115 PF00512 His Kinase A (phospho-acceptor) domain MKW86_01115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_01125 PF00158 Sigma-54 interaction domain MKW86_01125 PF00072 Response regulator receiver domain MKW86_01130 PF06496 Protein of unknown function (DUF1097) MKW86_01135 PF00174 Oxidoreductase molybdopterin binding domain MKW86_01140 PF01794 Ferric reductase like transmembrane component MKW86_01155 PF00486 Transcriptional regulatory protein, C terminal MKW86_01155 PF00072 Response regulator receiver domain MKW86_01160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_01170 PF01568 Molydopterin dinucleotide binding domain MKW86_01170 PF00384 Molybdopterin oxidoreductase MKW86_01170 PF18364 Molybdopterin oxidoreductase N-terminal domain MKW86_01175 PF03264 NapC/NirT cytochrome c family, N-terminal region MKW86_01180 PF01131 DNA topoisomerase MKW86_01180 PF01751 Toprim domain MKW86_01195 PF12852 Cupin MKW86_01195 PF12833 Helix-turn-helix domain MKW86_01200 PF02386 Cation transport protein MKW86_01205 PF02080 TrkA-C domain MKW86_01205 PF02254 TrkA-N domain MKW86_01210 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MKW86_01210 PF01565 FAD binding domain MKW86_01215 PF08279 HTH domain MKW86_01215 PF02237 Biotin protein ligase C terminal domain MKW86_01215 PF03099 Biotin/lipoate A/B protein ligase family MKW86_01220 PF00485 Phosphoribulokinase / Uridine kinase family MKW86_01235 PF03144 Elongation factor Tu domain 2 MKW86_01235 PF00009 Elongation factor Tu GTP binding domain MKW86_01235 PF03143 Elongation factor Tu C-terminal domain MKW86_01245 PF00584 SecE/Sec61-gamma subunits of protein translocation complex MKW86_01250 PF00467 KOW motif MKW86_01250 PF02357 Transcription termination factor nusG MKW86_01255 PF03946 Ribosomal protein L11, N-terminal domain MKW86_01255 PF00298 Ribosomal protein L11, RNA binding domain MKW86_01260 PF00687 Ribosomal protein L1p/L10e family MKW86_01265 PF00466 Ribosomal protein L10 MKW86_01270 PF00542 Ribosomal protein L7/L12 C-terminal domain MKW86_01270 PF16320 Ribosomal protein L7/L12 dimerisation domain MKW86_01275 PF00562 RNA polymerase Rpb2, domain 6 MKW86_01275 PF04560 RNA polymerase Rpb2, domain 7 MKW86_01275 PF10385 RNA polymerase beta subunit external 1 domain MKW86_01275 PF04565 RNA polymerase Rpb2, domain 3 MKW86_01275 PF04561 RNA polymerase Rpb2, domain 2 MKW86_01275 PF04563 RNA polymerase beta subunit MKW86_01280 PF00623 RNA polymerase Rpb1, domain 2 MKW86_01280 PF04983 RNA polymerase Rpb1, domain 3 MKW86_01280 PF05000 RNA polymerase Rpb1, domain 4 MKW86_01280 PF04998 RNA polymerase Rpb1, domain 5 MKW86_01280 PF04997 RNA polymerase Rpb1, domain 1 MKW86_01285 PF13309 HTH domain MKW86_01285 PF08348 YheO-like PAS domain MKW86_01290 PF01042 Endoribonuclease L-PSP MKW86_01295 PF02635 DsrE/DsrF-like family MKW86_01300 PF02635 DsrE/DsrF-like family MKW86_01305 PF04077 DsrH like protein MKW86_01310 PF00164 Ribosomal protein S12/S23 MKW86_01315 PF00177 Ribosomal protein S7p/S5e MKW86_01320 PF00679 Elongation factor G C-terminus MKW86_01320 PF14492 Elongation Factor G, domain II MKW86_01320 PF03764 Elongation factor G, domain IV MKW86_01320 PF00009 Elongation factor Tu GTP binding domain MKW86_01320 PF03144 Elongation factor Tu domain 2 MKW86_01325 PF03144 Elongation factor Tu domain 2 MKW86_01325 PF00009 Elongation factor Tu GTP binding domain MKW86_01325 PF03143 Elongation factor Tu C-terminal domain MKW86_01365 PF00860 Permease family MKW86_01370 PF02733 Dak1 domain MKW86_01375 PF02734 DAK2 domain MKW86_01380 PF00381 PTS HPr component phosphorylation site MKW86_01380 PF05524 PEP-utilising enzyme, N-terminal MKW86_01380 PF03610 PTS system fructose IIA component MKW86_01380 PF00391 PEP-utilising enzyme, mobile domain MKW86_01385 PF00465 Iron-containing alcohol dehydrogenase MKW86_01390 PF02954 Bacterial regulatory protein, Fis family MKW86_01390 PF00989 PAS fold MKW86_01390 PF00158 Sigma-54 interaction domain MKW86_01395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_01395 PF03466 LysR substrate binding domain MKW86_01405 PF00106 short chain dehydrogenase MKW86_01410 PF01594 AI-2E family transporter MKW86_01415 PF00293 NUDIX domain MKW86_01440 PF06628 Catalase-related immune-responsive MKW86_01440 PF00199 Catalase MKW86_01445 PF00583 Acetyltransferase (GNAT) family MKW86_01465 PF17158 Membrane-associated sensor, integral membrane domain MKW86_01465 PF00990 Diguanylate cyclase, GGDEF domain MKW86_01475 PF08402 TOBE domain MKW86_01475 PF00005 ABC transporter MKW86_01485 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_01500 PF07702 UTRA domain MKW86_01500 PF00392 Bacterial regulatory proteins, gntR family MKW86_01510 PF03466 LysR substrate binding domain MKW86_01510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_01520 PF17954 Quercetinase C-terminal cupin domain MKW86_01520 PF02678 Pirin MKW86_01525 PF07681 DoxX MKW86_01530 PF17946 RecC C-terminal domain MKW86_01535 PF12705 PD-(D/E)XK nuclease superfamily MKW86_01535 PF00580 UvrD/REP helicase N-terminal domain MKW86_01535 PF13361 UvrD-like helicase C-terminal domain MKW86_01540 PF13538 UvrD-like helicase C-terminal domain MKW86_01555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MKW86_01565 PF00990 Diguanylate cyclase, GGDEF domain MKW86_01575 PF00672 HAMP domain MKW86_01575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_01590 PF00486 Transcriptional regulatory protein, C terminal MKW86_01590 PF00072 Response regulator receiver domain MKW86_01595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_01595 PF00672 HAMP domain MKW86_01595 PF00512 His Kinase A (phospho-acceptor) domain MKW86_01600 PF01590 GAF domain MKW86_01600 PF00990 Diguanylate cyclase, GGDEF domain MKW86_01600 PF00360 Phytochrome region MKW86_01600 PF00563 EAL domain MKW86_01605 PF07715 TonB-dependent Receptor Plug Domain MKW86_01605 PF00593 TonB dependent receptor MKW86_01610 PF00313 'Cold-shock' DNA-binding domain MKW86_01620 PF01545 Cation efflux family MKW86_01620 PF16916 Dimerisation domain of Zinc Transporter MKW86_01630 PF00436 Single-strand binding protein family MKW86_01635 PF00196 Bacterial regulatory proteins, luxR family MKW86_01640 PF00005 ABC transporter MKW86_01640 PF17755 UvrA DNA-binding domain MKW86_01640 PF17760 UvrA interaction domain MKW86_01645 PF00990 Diguanylate cyclase, GGDEF domain MKW86_01650 PF03922 OmpW family MKW86_01655 PF00672 HAMP domain MKW86_01655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_01670 PF02219 Methylenetetrahydrofolate reductase MKW86_01680 PF03594 Benzoate membrane transport protein MKW86_01685 PF07883 Cupin domain MKW86_01685 PF01381 Helix-turn-helix MKW86_01715 PF04363 Protein of unknown function (DUF496) MKW86_01725 PF04751 Protein of unknown function (DUF615) MKW86_01730 PF01523 Putative modulator of DNA gyrase MKW86_01735 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MKW86_01740 PF01722 BolA-like protein MKW86_01750 PF05494 MlaC protein MKW86_01755 PF02470 MlaD protein MKW86_01760 PF02405 Permease MlaE MKW86_01765 PF00005 ABC transporter MKW86_01770 PF00571 CBS domain MKW86_01770 PF01380 SIS domain MKW86_01780 PF06835 Lipopolysaccharide-assembly, LptC-related MKW86_01785 PF03968 OstA-like protein MKW86_01790 PF00005 ABC transporter MKW86_01790 PF12399 Branched-chain amino acid ATP-binding cassette transporter MKW86_01795 PF04552 Sigma-54, DNA binding domain MKW86_01795 PF04963 Sigma-54 factor, core binding domain MKW86_01795 PF00309 Sigma-54 factor, Activator interacting domain (AID) MKW86_01800 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MKW86_01805 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKW86_01810 PF03668 P-loop ATPase protein family MKW86_01815 PF00381 PTS HPr component phosphorylation site MKW86_01820 PF08279 HTH domain MKW86_01820 PF05043 Mga helix-turn-helix domain MKW86_01820 PF00874 PRD domain MKW86_01820 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKW86_01825 PF07071 KDGP aldolase MKW86_01830 PF03841 L-seryl-tRNA selenium transferase MKW86_01835 PF01979 Amidohydrolase family MKW86_01865 PF13180 PDZ domain MKW86_01870 PF00595 PDZ domain MKW86_01870 PF13180 PDZ domain MKW86_01880 PF03969 AFG1-like ATPase MKW86_01885 PF00572 Ribosomal protein L13 MKW86_01890 PF00380 Ribosomal protein S9/S16 MKW86_01895 PF00355 Rieske [2Fe-2S] domain MKW86_01895 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal MKW86_01900 PF00032 Cytochrome b(C-terminal)/b6/petD MKW86_01900 PF00033 Cytochrome b/b6/petB MKW86_01905 PF02167 Cytochrome C1 family MKW86_01910 PF00043 Glutathione S-transferase, C-terminal domain MKW86_01910 PF02798 Glutathione S-transferase, N-terminal domain MKW86_01915 PF04386 Stringent starvation protein B MKW86_01920 PF04972 BON domain MKW86_01925 PF13580 SIS domain MKW86_01930 PF02021 Uncharacterised protein family UPF0102 MKW86_01935 PF04348 LppC putative lipoprotein MKW86_01940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MKW86_01950 PF02381 MraZ protein, putative antitoxin-like MKW86_01955 PF01795 MraW methylase family MKW86_01960 PF04999 Cell division protein FtsL MKW86_01965 PF03717 Penicillin-binding Protein dimerisation domain MKW86_01965 PF00905 Penicillin binding protein transpeptidase domain MKW86_01970 PF01225 Mur ligase family, catalytic domain MKW86_01970 PF02875 Mur ligase family, glutamate ligase domain MKW86_01970 PF08245 Mur ligase middle domain MKW86_01975 PF01225 Mur ligase family, catalytic domain MKW86_01975 PF02875 Mur ligase family, glutamate ligase domain MKW86_01975 PF08245 Mur ligase middle domain MKW86_01980 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 MKW86_01980 PF00953 Glycosyl transferase family 4 MKW86_01985 PF08245 Mur ligase middle domain MKW86_01985 PF02875 Mur ligase family, glutamate ligase domain MKW86_01990 PF01098 Cell cycle protein MKW86_01995 PF03033 Glycosyltransferase family 28 N-terminal domain MKW86_01995 PF04101 Glycosyltransferase family 28 C-terminal domain MKW86_02000 PF01225 Mur ligase family, catalytic domain MKW86_02000 PF08245 Mur ligase middle domain MKW86_02000 PF02875 Mur ligase family, glutamate ligase domain MKW86_02005 PF03799 Cell division protein FtsQ MKW86_02005 PF08478 POTRA domain, FtsQ-type MKW86_02010 PF02491 SHS2 domain inserted in FTSA MKW86_02015 PF12327 FtsZ family, C-terminal domain MKW86_02015 PF00091 Tubulin/FtsZ family, GTPase domain MKW86_02020 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase MKW86_02030 PF01043 SecA preprotein cross-linking domain MKW86_02030 PF07517 SecA DEAD-like domain MKW86_02030 PF02810 SEC-C motif MKW86_02030 PF07516 SecA Wing and Scaffold domain MKW86_02040 PF00293 NUDIX domain MKW86_02045 PF03884 DNA gyrase inhibitor YacG MKW86_02050 PF07072 Cell division protein MKW86_02055 PF01121 Dephospho-CoA kinase MKW86_02060 PF01478 Type IV leader peptidase family MKW86_02060 PF06750 Bacterial Peptidase A24 N-terminal domain MKW86_02065 PF00482 Type II secretion system (T2SS), protein F MKW86_02070 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MKW86_02070 PF00437 Type II/IV secretion system protein MKW86_02075 PF07963 Prokaryotic N-terminal methylation motif MKW86_02080 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain MKW86_02080 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain MKW86_02090 PF01510 N-acetylmuramoyl-L-alanine amidase MKW86_02095 PF07729 FCD domain MKW86_02095 PF00392 Bacterial regulatory proteins, gntR family MKW86_02100 PF00456 Transketolase, thiamine diphosphate binding domain MKW86_02100 PF17831 Pyruvate dehydrogenase E1 component middle domain MKW86_02105 PF00364 Biotin-requiring enzyme MKW86_02105 PF02817 e3 binding domain MKW86_02105 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MKW86_02110 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKW86_02110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MKW86_02120 PF12729 Four helix bundle sensory module for signal transduction MKW86_02120 PF00672 HAMP domain MKW86_02120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_02125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_02125 PF00672 HAMP domain MKW86_02125 PF12729 Four helix bundle sensory module for signal transduction MKW86_02130 PF01734 Patatin-like phospholipase MKW86_02135 PF11791 Aconitate B N-terminal domain MKW86_02135 PF00330 Aconitase family (aconitate hydratase) MKW86_02135 PF06434 Aconitate hydratase 2 N-terminus MKW86_02140 PF12792 CSS motif domain associated with EAL MKW86_02140 PF00563 EAL domain MKW86_02145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_02145 PF03466 LysR substrate binding domain MKW86_02150 PF01810 LysE type translocator MKW86_02155 PF01565 FAD binding domain MKW86_02155 PF04030 D-arabinono-1,4-lactone oxidase MKW86_02160 PF02492 CobW/HypB/UreG, nucleotide-binding domain MKW86_02160 PF07683 Cobalamin synthesis protein cobW C-terminal domain MKW86_02165 PF07690 Major Facilitator Superfamily MKW86_02175 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MKW86_02180 PF02152 Dihydroneopterin aldolase MKW86_02185 PF02660 Glycerol-3-phosphate acyltransferase MKW86_02225 PF07670 Nucleoside recognition MKW86_02230 PF00072 Response regulator receiver domain MKW86_02230 PF01584 CheW-like domain MKW86_02240 PF08351 Domain of unknown function (DUF1726) MKW86_02240 PF05127 Helicase MKW86_02240 PF17176 tRNA-binding domain MKW86_02240 PF13718 GNAT acetyltransferase 2 MKW86_02255 PF00210 Ferritin-like domain MKW86_02265 PF02142 MGS-like domain MKW86_02280 PF00710 Asparaginase, N-terminal MKW86_02280 PF17763 Glutaminase/Asparaginase C-terminal domain MKW86_02295 PF00356 Bacterial regulatory proteins, lacI family MKW86_02300 PF00367 phosphotransferase system, EIIB MKW86_02300 PF02378 Phosphotransferase system, EIIC MKW86_02305 PF11941 Domain of unknown function (DUF3459) MKW86_02305 PF00128 Alpha amylase, catalytic domain MKW86_02310 PF14602 Hexapeptide repeat of succinyl-transferase MKW86_02310 PF12464 Maltose acetyltransferase MKW86_02315 PF01037 Lrp/AsnC ligand binding domain MKW86_02320 PF00892 EamA-like transporter family MKW86_02330 PF00171 Aldehyde dehydrogenase family MKW86_02335 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_02340 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_02345 PF00005 ABC transporter MKW86_02345 PF08402 TOBE domain MKW86_02350 PF13416 Bacterial extracellular solute-binding protein MKW86_02355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_02355 PF03466 LysR substrate binding domain MKW86_02360 PF03553 Na+/H+ antiporter family MKW86_02400 PF00534 Glycosyl transferases group 1 MKW86_02400 PF08323 Starch synthase catalytic domain MKW86_02405 PF00483 Nucleotidyl transferase MKW86_02410 PF08468 Methyltransferase small domain N-terminal MKW86_02410 PF05175 Methyltransferase small domain MKW86_02415 PF00701 Dihydrodipicolinate synthetase family MKW86_02420 PF00563 EAL domain MKW86_02420 PF00990 Diguanylate cyclase, GGDEF domain MKW86_02420 PF00360 Phytochrome region MKW86_02420 PF01590 GAF domain MKW86_02430 PF13419 Haloacid dehalogenase-like hydrolase MKW86_02435 PF17209 Hfq protein MKW86_02440 PF04403 Paraquat-inducible protein A MKW86_02445 PF02470 MlaD protein MKW86_02450 PF03886 ABC-type transport auxiliary lipoprotein component MKW86_02455 PF00691 OmpA family MKW86_02455 PF01389 OmpA-like transmembrane domain MKW86_02465 PF00657 GDSL-like Lipase/Acylhydrolase MKW86_02470 PF04076 Bacterial OB fold (BOF) protein MKW86_02475 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain MKW86_02475 PF01464 Transglycosylase SLT domain MKW86_02480 PF04362 Bacterial Fe(2+) trafficking MKW86_02485 PF10576 Iron-sulfur binding domain of endonuclease III MKW86_02485 PF00633 Helix-hairpin-helix motif MKW86_02485 PF00730 HhH-GPD superfamily base excision DNA repair protein MKW86_02485 PF14815 NUDIX domain MKW86_02490 PF16537 Type II secretion system protein B MKW86_02495 PF01471 Putative peptidoglycan binding domain MKW86_02495 PF13401 AAA domain MKW86_02500 PF01966 HD domain MKW86_02500 PF01743 Poly A polymerase head domain MKW86_02500 PF12627 Probable RNA and SrmB- binding site of polymerase A MKW86_02515 PF04172 LrgB-like family MKW86_02520 PF03788 LrgA family MKW86_02525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_02525 PF03466 LysR substrate binding domain MKW86_02535 PF00392 Bacterial regulatory proteins, gntR family MKW86_02535 PF00155 Aminotransferase class I and II MKW86_02555 PF04073 Aminoacyl-tRNA editing domain MKW86_02560 PF01384 Phosphate transporter family MKW86_02565 PF01865 Protein of unknown function DUF47 MKW86_02585 PF03279 Bacterial lipid A biosynthesis acyltransferase MKW86_02590 PF00294 pfkB family carbohydrate kinase MKW86_02590 PF01467 Cytidylyltransferase-like MKW86_02595 PF02321 Outer membrane efflux protein MKW86_02600 PF00293 NUDIX domain MKW86_02605 PF06853 Protein of unknown function (DUF1249) MKW86_02610 PF00149 Calcineurin-like phosphoesterase MKW86_02615 PF05728 Uncharacterised protein family (UPF0227) MKW86_02620 PF00293 NUDIX domain MKW86_02630 PF07869 Protein of unknown function (DUF1656) MKW86_02635 PF00529 HlyD membrane-fusion protein of T1SS MKW86_02635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKW86_02640 PF04632 Fusaric acid resistance protein family MKW86_02645 PF00204 DNA gyrase B MKW86_02645 PF00986 DNA gyrase B subunit, carboxyl terminus MKW86_02645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_02645 PF01751 Toprim domain MKW86_02650 PF03989 DNA gyrase C-terminal domain, beta-propeller MKW86_02650 PF00521 DNA gyrase/topoisomerase IV, subunit A MKW86_02655 PF00183 Hsp90 protein MKW86_02655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_02685 PF01556 DnaJ C terminal domain MKW86_02685 PF00684 DnaJ central domain MKW86_02685 PF00226 DnaJ domain MKW86_02690 PF00578 AhpC/TSA family MKW86_02710 PF01553 Acyltransferase MKW86_02715 PF04012 PspA/IM30 family MKW86_02730 PF01541 GIY-YIG catalytic domain MKW86_02740 PF00892 EamA-like transporter family MKW86_02745 PF03167 Uracil DNA glycosylase superfamily MKW86_02750 PF00892 EamA-like transporter family MKW86_02755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_02755 PF03466 LysR substrate binding domain MKW86_02760 PF00950 ABC 3 transport family MKW86_02765 PF00005 ABC transporter MKW86_02770 PF01297 Zinc-uptake complex component A periplasmic MKW86_02790 PF08525 Opacity-associated protein A N-terminal motif MKW86_02790 PF01551 Peptidase family M23 MKW86_02790 PF01476 LysM domain MKW86_02795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKW86_02800 PF04222 Protein of unknown function (DUF416) MKW86_02815 PF02028 BCCT, betaine/carnitine/choline family transporter MKW86_02820 PF00488 MutS domain V MKW86_02820 PF05190 MutS family domain IV MKW86_02820 PF05192 MutS domain III MKW86_02820 PF05188 MutS domain II MKW86_02820 PF01624 MutS domain I MKW86_02825 PF02464 Competence-damaged protein MKW86_02830 PF00154 recA bacterial DNA recombination protein MKW86_02835 PF02631 RecX family MKW86_02840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MKW86_02840 PF01411 tRNA synthetases class II (A) MKW86_02840 PF02272 DHHA1 domain MKW86_02845 PF00696 Amino acid kinase family MKW86_02845 PF01842 ACT domain MKW86_02845 PF13840 ACT domain MKW86_02850 PF02599 Global regulator protein family MKW86_02885 PF00768 D-alanyl-D-alanine carboxypeptidase MKW86_02890 PF09335 SNARE associated Golgi protein MKW86_02895 PF00571 CBS domain MKW86_02895 PF03471 Transporter associated domain MKW86_02895 PF01595 Cyclin M transmembrane N-terminal domain MKW86_02910 PF10458 Valyl tRNA synthetase tRNA binding arm MKW86_02910 PF08264 Anticodon-binding domain of tRNA MKW86_02910 PF00133 tRNA synthetases class I (I, L, M and V) MKW86_02915 PF04364 DNA polymerase III chi subunit, HolC MKW86_02920 PF02789 Cytosol aminopeptidase family, N-terminal domain MKW86_02920 PF00883 Cytosol aminopeptidase family, catalytic domain MKW86_02925 PF03739 Lipopolysaccharide export system permease LptF/LptG MKW86_02930 PF03739 Lipopolysaccharide export system permease LptF/LptG MKW86_02945 PF00589 Phage integrase family MKW86_02955 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MKW86_02955 PF01926 50S ribosome-binding GTPase MKW86_02995 PF02796 Helix-turn-helix domain of resolvase MKW86_02995 PF00239 Resolvase, N terminal domain MKW86_03030 PF00909 Ammonium Transporter Family MKW86_03035 PF01938 TRAM domain MKW86_03035 PF05958 tRNA (Uracil-5-)-methyltransferase MKW86_03045 PF07963 Prokaryotic N-terminal methylation motif MKW86_03050 PF01026 TatD related DNase MKW86_03055 PF01773 Na+ dependent nucleoside transporter N-terminus MKW86_03055 PF07662 Na+ dependent nucleoside transporter C-terminus MKW86_03055 PF07670 Nucleoside recognition MKW86_03065 PF01791 DeoC/LacD family aldolase MKW86_03070 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain MKW86_03070 PF00591 Glycosyl transferase family, a/b domain MKW86_03070 PF02885 Glycosyl transferase family, helical bundle domain MKW86_03075 PF01676 Metalloenzyme superfamily MKW86_03080 PF01048 Phosphorylase superfamily MKW86_03085 PF00990 Diguanylate cyclase, GGDEF domain MKW86_03085 PF05231 MASE1 MKW86_03085 PF00563 EAL domain MKW86_03085 PF08447 PAS fold MKW86_03085 PF08448 PAS fold MKW86_03085 PF13426 PAS domain MKW86_03095 PF18429 Domain of unknown function (DUF5609) MKW86_03110 PF18073 Rubredoxin metal binding domain MKW86_03115 PF07238 PilZ domain MKW86_03120 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ MKW86_03130 PF00216 Bacterial DNA-binding protein MKW86_03145 PF01207 Dihydrouridine synthase (Dus) MKW86_03150 PF01475 Ferric uptake regulator family MKW86_03165 PF05525 Branched-chain amino acid transport protein MKW86_03170 PF05525 Branched-chain amino acid transport protein MKW86_03175 PF05175 Methyltransferase small domain MKW86_03180 PF00271 Helicase conserved C-terminal domain MKW86_03180 PF00270 DEAD/DEAH box helicase MKW86_03185 PF03883 Peroxide stress protein YaaA MKW86_03190 PF00437 Type II/IV secretion system protein MKW86_03195 PF00437 Type II/IV secretion system protein MKW86_03200 PF01168 Alanine racemase, N-terminal domain MKW86_03205 PF03807 NADP oxidoreductase coenzyme F420-dependent MKW86_03205 PF14748 Pyrroline-5-carboxylate reductase dimerisation MKW86_03210 PF02325 YGGT family MKW86_03215 PF02594 Uncharacterised ACR, YggU family COG1872 MKW86_03230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKW86_03240 PF00132 Bacterial transferase hexapeptide (six repeats) MKW86_03245 PF10952 Protein of unknown function (DUF2753) MKW86_03250 PF00378 Enoyl-CoA hydratase/isomerase MKW86_03265 PF00106 short chain dehydrogenase MKW86_03270 PF04073 Aminoacyl-tRNA editing domain MKW86_03270 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MKW86_03270 PF03129 Anticodon binding domain MKW86_03275 PF00672 HAMP domain MKW86_03275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_03280 PF01330 RuvA N terminal domain MKW86_03280 PF07499 RuvA, C-terminal domain MKW86_03285 PF17864 RuvB AAA lid domain MKW86_03285 PF05491 RuvB C-terminal winged helix domain MKW86_03285 PF05496 Holliday junction DNA helicase RuvB P-loop domain MKW86_03290 PF01654 Cytochrome bd terminal oxidase subunit I MKW86_03295 PF02322 Cytochrome bd terminal oxidase subunit II MKW86_03300 PF08173 Membrane bound YbgT-like protein MKW86_03305 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) MKW86_03310 PF03061 Thioesterase superfamily MKW86_03315 PF01618 MotA/TolQ/ExbB proton channel family MKW86_03320 PF02472 Biopolymer transport protein ExbD/TolR MKW86_03330 PF04052 TolB amino-terminal domain MKW86_03330 PF07676 WD40-like Beta Propeller Repeat MKW86_03335 PF00691 OmpA family MKW86_03340 PF13174 Tetratricopeptide repeat MKW86_03340 PF16331 TolA binding protein trimerisation MKW86_03415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_03415 PF00672 HAMP domain MKW86_03420 PF02445 Quinolinate synthetase A protein MKW86_03425 PF01263 Aldose 1-epimerase MKW86_03430 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MKW86_03430 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MKW86_03435 PF02446 4-alpha-glucanotransferase MKW86_03440 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MKW86_03440 PF00128 Alpha amylase, catalytic domain MKW86_03440 PF02806 Alpha amylase, C-terminal all-beta domain MKW86_03445 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MKW86_03445 PF00128 Alpha amylase, catalytic domain MKW86_03450 PF01641 SelR domain MKW86_03460 PF00293 NUDIX domain MKW86_03465 PF00107 Zinc-binding dehydrogenase MKW86_03465 PF16884 N-terminal domain of oxidoreductase MKW86_03470 PF02566 OsmC-like protein MKW86_03475 PF01047 MarR family MKW86_03490 PF01037 Lrp/AsnC ligand binding domain MKW86_03505 PF07690 Major Facilitator Superfamily MKW86_03525 PF00209 Sodium:neurotransmitter symporter family MKW86_03535 PF00209 Sodium:neurotransmitter symporter family MKW86_03560 PF00392 Bacterial regulatory proteins, gntR family MKW86_03560 PF00155 Aminotransferase class I and II MKW86_03570 PF01810 LysE type translocator MKW86_03575 PF01177 Asp/Glu/Hydantoin racemase MKW86_03580 PF00394 Multicopper oxidase MKW86_03580 PF07732 Multicopper oxidase MKW86_03580 PF07731 Multicopper oxidase MKW86_03590 PF04074 YhcH/YjgK/YiaL MKW86_03595 PF00871 Acetokinase family MKW86_03600 PF00924 Mechanosensitive ion channel MKW86_03605 PF03734 L,D-transpeptidase catalytic domain MKW86_03605 PF17969 L,D-transpeptidase C-terminal domain MKW86_03610 PF00474 Sodium:solute symporter family MKW86_03640 PF02525 Flavodoxin-like fold MKW86_03645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_03645 PF03466 LysR substrate binding domain MKW86_03650 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ MKW86_03660 PF00005 ABC transporter MKW86_03660 PF12848 ABC transporter MKW86_03665 PF01380 SIS domain MKW86_03665 PF00571 CBS domain MKW86_03670 PF01957 NfeD-like C-terminal, partner-binding MKW86_03675 PF01145 SPFH domain / Band 7 family MKW86_03675 PF16200 C-terminal region of band_7 MKW86_03680 PF10414 Sirohaem synthase dimerisation region MKW86_03680 PF14824 Sirohaem biosynthesis protein central MKW86_03680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MKW86_03685 PF01507 Phosphoadenosine phosphosulfate reductase family MKW86_03690 PF00009 Elongation factor Tu GTP binding domain MKW86_03695 PF03600 Citrate transporter MKW86_03695 PF02080 TrkA-C domain MKW86_03715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_03715 PF12729 Four helix bundle sensory module for signal transduction MKW86_03715 PF00672 HAMP domain MKW86_03735 PF00005 ABC transporter MKW86_03750 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) MKW86_03765 PF00719 Inorganic pyrophosphatase MKW86_03770 PF01225 Mur ligase family, catalytic domain MKW86_03770 PF02875 Mur ligase family, glutamate ligase domain MKW86_03770 PF08245 Mur ligase middle domain MKW86_03775 PF02441 Flavoprotein MKW86_03780 PF00440 Bacterial regulatory proteins, tetR family MKW86_03785 PF00156 Phosphoribosyl transferase domain MKW86_03790 PF00005 ABC transporter MKW86_03795 PF01061 ABC-2 type transporter MKW86_03800 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component MKW86_03805 PF01869 BadF/BadG/BcrA/BcrD ATPase family MKW86_03825 PF02569 Pantoate-beta-alanine ligase MKW86_03830 PF02548 Ketopantoate hydroxymethyltransferase MKW86_03835 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MKW86_03840 PF01743 Poly A polymerase head domain MKW86_03840 PF12626 Polymerase A arginine-rich C-terminus MKW86_03840 PF12627 Probable RNA and SrmB- binding site of polymerase A MKW86_03845 PF00749 tRNA synthetases class I (E and Q), catalytic domain MKW86_03850 PF01258 Prokaryotic dksA/traR C4-type zinc finger MKW86_03855 PF17746 SfsA N-terminal OB domain MKW86_03855 PF03749 Sugar fermentation stimulation protein RE domain MKW86_03865 PF00270 DEAD/DEAH box helicase MKW86_03865 PF04408 Helicase associated domain (HA2) MKW86_03865 PF00271 Helicase conserved C-terminal domain MKW86_03865 PF08482 ATP-dependent helicase C-terminal MKW86_03870 PF00912 Transglycosylase MKW86_03870 PF00905 Penicillin binding protein transpeptidase domain MKW86_03870 PF14814 Bifunctional transglycosylase second domain MKW86_03875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MKW86_03880 PF00893 Small Multidrug Resistance protein MKW86_03885 PF00893 Small Multidrug Resistance protein MKW86_03895 PF11849 Domain of unknown function (DUF3369) MKW86_03905 PF01569 PAP2 superfamily MKW86_03920 PF00202 Aminotransferase class-III MKW86_03925 PF00654 Voltage gated chloride channel MKW86_03935 PF01521 Iron-sulphur cluster biosynthesis MKW86_03960 PF01810 LysE type translocator MKW86_03965 PF02954 Bacterial regulatory protein, Fis family MKW86_03970 PF01207 Dihydrouridine synthase (Dus) MKW86_03975 PF02321 Outer membrane efflux protein MKW86_03980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKW86_04010 PF00072 Response regulator receiver domain MKW86_04015 PF00854 POT family MKW86_04020 PF00483 Nucleotidyl transferase MKW86_04030 PF00459 Inositol monophosphatase family MKW86_04035 PF03795 YCII-related domain MKW86_04040 PF04279 Intracellular septation protein A MKW86_04045 PF00282 Pyridoxal-dependent decarboxylase conserved domain MKW86_04050 PF03006 Haemolysin-III related MKW86_04055 PF02080 TrkA-C domain MKW86_04055 PF06826 Predicted Permease Membrane Region MKW86_04075 PF00072 Response regulator receiver domain MKW86_04075 PF01584 CheW-like domain MKW86_04080 PF13472 GDSL-like Lipase/Acylhydrolase family MKW86_04085 PF00005 ABC transporter MKW86_04095 PF01370 NAD dependent epimerase/dehydratase family MKW86_04095 PF08338 Domain of unknown function (DUF1731) MKW86_04100 PF12792 CSS motif domain associated with EAL MKW86_04100 PF00563 EAL domain MKW86_04105 PF00155 Aminotransferase class I and II MKW86_04110 PF01483 Proprotein convertase P-domain MKW86_04110 PF04389 Peptidase family M28 MKW86_04115 PF02390 Putative methyltransferase MKW86_04120 PF04320 Protein with unknown function (DUF469) MKW86_04125 PF04960 Glutaminase MKW86_04130 PF00581 Rhodanese-like domain MKW86_04135 PF05922 Peptidase inhibitor I9 MKW86_04135 PF00082 Subtilase family MKW86_04140 PF06004 Bacterial protein of unknown function (DUF903) MKW86_04145 PF00664 ABC transporter transmembrane region MKW86_04145 PF00005 ABC transporter MKW86_04150 PF00561 alpha/beta hydrolase fold MKW86_04165 PF05547 Immune inhibitor A peptidase M6 MKW86_04165 PF00801 PKD domain MKW86_04175 PF06877 Regulator of ribonuclease activity B MKW86_04180 PF00990 Diguanylate cyclase, GGDEF domain MKW86_04180 PF03707 Bacterial signalling protein N terminal repeat MKW86_04180 PF00563 EAL domain MKW86_04190 PF12852 Cupin MKW86_04190 PF12833 Helix-turn-helix domain MKW86_04195 PF02627 Carboxymuconolactone decarboxylase family MKW86_04200 PF04224 Protein of unknown function, DUF417 MKW86_04215 PF09905 DNA-binding protein VF530 MKW86_04220 PF02666 Phosphatidylserine decarboxylase MKW86_04225 PF03193 RsgA GTPase MKW86_04230 PF00929 Exonuclease MKW86_04270 PF00313 'Cold-shock' DNA-binding domain MKW86_04280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_04280 PF00672 HAMP domain MKW86_04285 PF00749 tRNA synthetases class I (E and Q), catalytic domain MKW86_04325 PF06483 Chitinase C MKW86_04325 PF00704 Glycosyl hydrolases family 18 MKW86_04340 PF02472 Biopolymer transport protein ExbD/TolR MKW86_04345 PF01618 MotA/TolQ/ExbB proton channel family MKW86_04350 PF01618 MotA/TolQ/ExbB proton channel family MKW86_04360 PF07715 TonB-dependent Receptor Plug Domain MKW86_04360 PF00593 TonB dependent receptor MKW86_04365 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_04370 PF12911 N-terminal TM domain of oligopeptide transport permease C MKW86_04370 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_04380 PF00005 ABC transporter MKW86_04380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKW86_04385 PF00005 ABC transporter MKW86_04385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKW86_04390 PF01546 Peptidase family M20/M25/M40 MKW86_04390 PF07687 Peptidase dimerisation domain MKW86_04395 PF00156 Phosphoribosyl transferase domain MKW86_04400 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) MKW86_04405 PF07417 Sigma factor-binding transcriptional regulator Crl MKW86_04410 PF01472 PUA domain MKW86_04410 PF00696 Amino acid kinase family MKW86_04415 PF00171 Aldehyde dehydrogenase family MKW86_04425 PF00582 Universal stress protein family MKW86_04450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MKW86_04450 PF00384 Molybdopterin oxidoreductase MKW86_04450 PF01568 Molydopterin dinucleotide binding domain MKW86_04450 PF04324 BFD-like [2Fe-2S] binding domain MKW86_04455 PF10414 Sirohaem synthase dimerisation region MKW86_04455 PF14824 Sirohaem biosynthesis protein central MKW86_04455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MKW86_04465 PF00005 ABC transporter MKW86_04470 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_04475 PF00005 ABC transporter MKW86_04480 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MKW86_04480 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MKW86_04480 PF04324 BFD-like [2Fe-2S] binding domain MKW86_04480 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKW86_04480 PF18267 Rubredoxin NAD+ reductase C-terminal domain MKW86_04480 PF13806 Rieske-like [2Fe-2S] domain MKW86_04485 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MKW86_04485 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKW86_04485 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MKW86_04485 PF04324 BFD-like [2Fe-2S] binding domain MKW86_04485 PF18267 Rubredoxin NAD+ reductase C-terminal domain MKW86_04485 PF13806 Rieske-like [2Fe-2S] domain MKW86_04490 PF00294 pfkB family carbohydrate kinase MKW86_04495 PF04227 Indigoidine synthase A like protein MKW86_04500 PF00194 Eukaryotic-type carbonic anhydrase MKW86_04505 PF03150 Di-haem cytochrome c peroxidase MKW86_04505 PF00034 Cytochrome c MKW86_04540 PF00550 Phosphopantetheine attachment site MKW86_04545 PF00550 Phosphopantetheine attachment site MKW86_04555 PF00501 AMP-binding enzyme MKW86_04555 PF13193 AMP-binding enzyme C-terminal domain MKW86_04560 PF07977 FabA-like domain MKW86_04570 PF00221 Aromatic amino acid lyase MKW86_04595 PF02801 Beta-ketoacyl synthase, C-terminal domain MKW86_04595 PF00109 Beta-ketoacyl synthase, N-terminal domain MKW86_04610 PF00109 Beta-ketoacyl synthase, N-terminal domain MKW86_04610 PF02801 Beta-ketoacyl synthase, C-terminal domain MKW86_04620 PF00994 Probable molybdopterin binding domain MKW86_04630 PF06738 Putative threonine/serine exporter MKW86_04635 PF12821 Threonine/Serine exporter, ThrE MKW86_04640 PF00186 Dihydrofolate reductase MKW86_04645 PF00005 ABC transporter MKW86_04645 PF00571 CBS domain MKW86_04650 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_04655 PF04069 Substrate binding domain of ABC-type glycine betaine transport system MKW86_04660 PF01507 Phosphoadenosine phosphosulfate reductase family MKW86_04665 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MKW86_04665 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MKW86_04670 PF00667 FAD binding domain MKW86_04670 PF00258 Flavodoxin MKW86_04670 PF00175 Oxidoreductase NAD-binding domain MKW86_04675 PF02567 Phenazine biosynthesis-like protein MKW86_04680 PF01336 OB-fold nucleic acid binding domain MKW86_04680 PF00152 tRNA synthetases class II (D, K and N) MKW86_04690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_04690 PF00672 HAMP domain MKW86_04690 PF02743 Cache domain MKW86_04695 PF03616 Sodium/glutamate symporter MKW86_04700 PF00710 Asparaginase, N-terminal MKW86_04700 PF17763 Glutaminase/Asparaginase C-terminal domain MKW86_04705 PF07023 Protein of unknown function (DUF1315) MKW86_04710 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MKW86_04710 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MKW86_04725 PF01343 Peptidase family S49 MKW86_04730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MKW86_04730 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKW86_04735 PF00881 Nitroreductase family MKW86_04740 PF12464 Maltose acetyltransferase MKW86_04740 PF14602 Hexapeptide repeat of succinyl-transferase MKW86_04745 PF01842 ACT domain MKW86_04745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKW86_04745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKW86_04755 PF00107 Zinc-binding dehydrogenase MKW86_04755 PF08240 Alcohol dehydrogenase GroES-like domain MKW86_04760 PF03466 LysR substrate binding domain MKW86_04760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_04765 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MKW86_04765 PF00367 phosphotransferase system, EIIB MKW86_04765 PF02378 Phosphotransferase system, EIIC MKW86_04770 PF00474 Sodium:solute symporter family MKW86_04780 PF02785 Biotin carboxylase C-terminal domain MKW86_04780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MKW86_04780 PF00289 Biotin carboxylase, N-terminal domain MKW86_04785 PF00364 Biotin-requiring enzyme MKW86_04790 PF01220 Dehydroquinase class II MKW86_04795 PF16177 Acetyl-coenzyme A synthetase N-terminus MKW86_04795 PF00501 AMP-binding enzyme MKW86_04795 PF13193 AMP-binding enzyme C-terminal domain MKW86_04805 PF00563 EAL domain MKW86_04805 PF00990 Diguanylate cyclase, GGDEF domain MKW86_04805 PF03707 Bacterial signalling protein N terminal repeat MKW86_04805 PF13188 PAS domain MKW86_04825 PF02613 Nitrate reductase delta subunit MKW86_04840 PF00464 Serine hydroxymethyltransferase MKW86_04855 PF03477 ATP cone domain MKW86_04860 PF01872 RibD C-terminal domain MKW86_04860 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MKW86_04865 PF00677 Lumazine binding domain MKW86_04870 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MKW86_04870 PF00925 GTP cyclohydrolase II MKW86_04875 PF00885 6,7-dimethyl-8-ribityllumazine synthase MKW86_04880 PF01029 NusB family MKW86_04885 PF00586 AIR synthase related protein, N-terminal domain MKW86_04885 PF02769 AIR synthase related protein, C-terminal domain MKW86_04890 PF04608 Phosphatidylglycerophosphatase A MKW86_04895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKW86_04895 PF00005 ABC transporter MKW86_04900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKW86_04905 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_04910 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_04910 PF12911 N-terminal TM domain of oligopeptide transport permease C MKW86_04915 PF02780 Transketolase, C-terminal domain MKW86_04915 PF02779 Transketolase, pyrimidine binding domain MKW86_04915 PF13292 1-deoxy-D-xylulose-5-phosphate synthase MKW86_04920 PF00348 Polyprenyl synthetase MKW86_04925 PF02609 Exonuclease VII small subunit MKW86_04930 PF01618 MotA/TolQ/ExbB proton channel family MKW86_04935 PF13677 Membrane MotB of proton-channel complex MotA/MotB MKW86_04935 PF00691 OmpA family MKW86_04940 PF01272 Transcription elongation factor, GreA/GreB, C-term MKW86_04940 PF03449 Transcription elongation factor, N-terminal MKW86_04950 PF01985 CRS1 / YhbY (CRM) domain MKW86_04955 PF01728 FtsJ-like methyltransferase MKW86_04960 PF00004 ATPase family associated with various cellular activities (AAA) MKW86_04960 PF17862 AAA+ lid domain MKW86_04960 PF06480 FtsH Extracellular MKW86_04960 PF01434 Peptidase family M41 MKW86_04965 PF00809 Pterin binding enzyme MKW86_04970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MKW86_04970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MKW86_04970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MKW86_04970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MKW86_04975 PF00121 Triosephosphate isomerase MKW86_04980 PF03840 Preprotein translocase SecG subunit MKW86_04995 PF17384 RimP C-terminal SH3 domain MKW86_04995 PF02576 RimP N-terminal domain MKW86_05000 PF08529 NusA N-terminal domain MKW86_05000 PF00575 S1 RNA binding domain MKW86_05000 PF13184 NusA-like KH domain MKW86_05005 PF00009 Elongation factor Tu GTP binding domain MKW86_05005 PF11987 Translation-initiation factor 2 MKW86_05005 PF08364 Bacterial translation initiation factor IF-2 associated region MKW86_05005 PF04760 Translation initiation factor IF-2, N-terminal region MKW86_05010 PF02033 Ribosome-binding factor A MKW86_05015 PF01509 TruB family pseudouridylate synthase (N terminal domain) MKW86_05015 PF09157 Pseudouridine synthase II TruB, C-terminal MKW86_05015 PF16198 tRNA pseudouridylate synthase B C-terminal domain MKW86_05020 PF00312 Ribosomal protein S15 MKW86_05025 PF00013 KH domain MKW86_05025 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MKW86_05025 PF01138 3' exoribonuclease family, domain 1 MKW86_05025 PF03725 3' exoribonuclease family, domain 2 MKW86_05025 PF00575 S1 RNA binding domain MKW86_05030 PF07690 Major Facilitator Superfamily MKW86_05035 PF00990 Diguanylate cyclase, GGDEF domain MKW86_05035 PF03707 Bacterial signalling protein N terminal repeat MKW86_05035 PF00563 EAL domain MKW86_05040 PF02635 DsrE/DsrF-like family MKW86_05050 PF10415 Fumarase C C-terminus MKW86_05050 PF00206 Lyase MKW86_05055 PF03575 Peptidase family S51 MKW86_05060 PF02554 Carbon starvation protein CstA MKW86_05060 PF13722 5TM C-terminal transporter carbon starvation CstA MKW86_05065 PF04397 LytTr DNA-binding domain MKW86_05065 PF00072 Response regulator receiver domain MKW86_05070 PF06580 Histidine kinase MKW86_05070 PF07694 5TMR of 5TMR-LYT MKW86_05075 PF00196 Bacterial regulatory proteins, luxR family MKW86_05075 PF00072 Response regulator receiver domain MKW86_05080 PF00512 His Kinase A (phospho-acceptor) domain MKW86_05080 PF00989 PAS fold MKW86_05080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_05085 PF13247 4Fe-4S dicluster domain MKW86_05090 PF03916 Polysulphide reductase, NrfD MKW86_05095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MKW86_05095 PF00384 Molybdopterin oxidoreductase MKW86_05095 PF01568 Molydopterin dinucleotide binding domain MKW86_05115 PF02668 Taurine catabolism dioxygenase TauD, TfdA family MKW86_05120 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase MKW86_05125 PF03734 L,D-transpeptidase catalytic domain MKW86_05125 PF17969 L,D-transpeptidase C-terminal domain MKW86_05135 PF01523 Putative modulator of DNA gyrase MKW86_05140 PF01523 Putative modulator of DNA gyrase MKW86_05145 PF00258 Flavodoxin MKW86_05150 PF00589 Phage integrase family MKW86_05150 PF02899 Phage integrase, N-terminal SAM-like domain MKW86_05155 PF01741 Large-conductance mechanosensitive channel, MscL MKW86_05160 PF13098 Thioredoxin-like domain MKW86_05160 PF10411 Disulfide bond isomerase protein N-terminus MKW86_05165 PF01368 DHH family MKW86_05165 PF02272 DHHA1 domain MKW86_05165 PF17768 RecJ OB domain MKW86_05170 PF13411 MerR HTH family regulatory protein MKW86_05185 PF02508 Rnf-Nqr subunit, membrane protein MKW86_05190 PF06821 Serine hydrolase MKW86_05200 PF04055 Radical SAM superfamily MKW86_05200 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family MKW86_05205 PF03099 Biotin/lipoate A/B protein ligase family MKW86_05210 PF04359 Protein of unknown function (DUF493) MKW86_05215 PF07943 Penicillin-binding protein 5, C-terminal domain MKW86_05215 PF00768 D-alanyl-D-alanine carboxypeptidase MKW86_05220 PF03330 Lytic transglycolase MKW86_05220 PF05036 Sporulation related domain MKW86_05225 PF13406 Transglycosylase SLT domain MKW86_05230 PF01098 Cell cycle protein MKW86_05235 PF01098 Cell cycle protein MKW86_05240 PF03717 Penicillin-binding Protein dimerisation domain MKW86_05240 PF00905 Penicillin binding protein transpeptidase domain MKW86_05245 PF02590 Predicted SPOUT methyltransferase MKW86_05255 PF01467 Cytidylyltransferase-like MKW86_05275 PF00133 tRNA synthetases class I (I, L, M and V) MKW86_05275 PF08264 Anticodon-binding domain of tRNA MKW86_05275 PF13603 Leucyl-tRNA synthetase, Domain 2 MKW86_05280 PF07295 Zinc-ribbon containing domain MKW86_05285 PF00795 Carbon-nitrogen hydrolase MKW86_05290 PF03471 Transporter associated domain MKW86_05290 PF00571 CBS domain MKW86_05295 PF02130 Uncharacterized protein family UPF0054 MKW86_05300 PF02562 PhoH-like protein MKW86_05305 PF01938 TRAM domain MKW86_05305 PF00919 Uncharacterized protein family UPF0004 MKW86_05305 PF04055 Radical SAM superfamily MKW86_05310 PF01494 FAD binding domain MKW86_05315 PF00857 Isochorismatase family MKW86_05320 PF00313 'Cold-shock' DNA-binding domain MKW86_05325 PF00990 Diguanylate cyclase, GGDEF domain MKW86_05325 PF05230 MASE2 domain MKW86_05330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_05330 PF03466 LysR substrate binding domain MKW86_05340 PF13419 Haloacid dehalogenase-like hydrolase MKW86_05350 PF00990 Diguanylate cyclase, GGDEF domain MKW86_05360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKW86_05360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKW86_05370 PF09997 Predicted membrane protein (DUF2238) MKW86_05375 PF01132 Elongation factor P (EF-P) OB domain MKW86_05375 PF08207 Elongation factor P (EF-P) KOW-like domain MKW86_05375 PF09285 Elongation factor P, C-terminal MKW86_05385 PF00478 IMP dehydrogenase / GMP reductase domain MKW86_05395 PF08521 Two-component sensor kinase N-terminal MKW86_05395 PF00512 His Kinase A (phospho-acceptor) domain MKW86_05395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_05400 PF00486 Transcriptional regulatory protein, C terminal MKW86_05400 PF00072 Response regulator receiver domain MKW86_05420 PF00501 AMP-binding enzyme MKW86_05435 PF06224 Winged helix DNA-binding domain MKW86_05455 PF02371 Transposase IS116/IS110/IS902 family MKW86_05455 PF01548 Transposase MKW86_05465 PF02313 Fumarate reductase subunit D MKW86_05470 PF02300 Fumarate reductase subunit C MKW86_05475 PF13085 2Fe-2S iron-sulfur cluster binding domain MKW86_05475 PF13183 4Fe-4S dicluster domain MKW86_05480 PF00890 FAD binding domain MKW86_05480 PF02910 Fumarate reductase flavoprotein C-term MKW86_05485 PF02743 Cache domain MKW86_05485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_05485 PF00672 HAMP domain MKW86_05490 PF03009 Glycerophosphoryl diester phosphodiesterase family MKW86_05495 PF00924 Mechanosensitive ion channel MKW86_05495 PF12794 Mechanosensitive ion channel inner membrane domain 1 MKW86_05495 PF12795 Mechanosensitive ion channel porin domain MKW86_05505 PF01551 Peptidase family M23 MKW86_05505 PF08525 Opacity-associated protein A N-terminal motif MKW86_05505 PF01476 LysM domain MKW86_05520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_05520 PF03466 LysR substrate binding domain MKW86_05535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_05535 PF00672 HAMP domain MKW86_05535 PF02743 Cache domain MKW86_05540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_05540 PF03466 LysR substrate binding domain MKW86_05545 PF17092 Penicillin-binding protein OB-like domain MKW86_05545 PF00912 Transglycosylase MKW86_05545 PF00905 Penicillin binding protein transpeptidase domain MKW86_05550 PF11104 Type IV pilus assembly protein PilM; MKW86_05560 PF04350 Pilus assembly protein, PilO MKW86_05570 PF07660 Secretin and TonB N terminus short domain MKW86_05570 PF11741 AMIN domain MKW86_05570 PF00263 Bacterial type II and III secretion system protein MKW86_05570 PF03958 Bacterial type II/III secretion system short domain MKW86_05575 PF01202 Shikimate kinase MKW86_05580 PF01761 3-dehydroquinate synthase MKW86_05590 PF02086 D12 class N6 adenine-specific DNA methyltransferase MKW86_05595 PF00834 Ribulose-phosphate 3 epimerase family MKW86_05600 PF13419 Haloacid dehalogenase-like hydrolase MKW86_05605 PF00579 tRNA synthetases class I (W and Y) MKW86_05615 PF00117 Glutamine amidotransferase class-I MKW86_05620 PF00202 Aminotransferase class-III MKW86_05625 PF04958 Arginine N-succinyltransferase beta subunit MKW86_05630 PF00171 Aldehyde dehydrogenase family MKW86_05640 PF13419 Haloacid dehalogenase-like hydrolase MKW86_05645 PF07690 Major Facilitator Superfamily MKW86_05650 PF10371 Domain of unknown function MKW86_05650 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MKW86_05650 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase MKW86_05650 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MKW86_05650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MKW86_05660 PF00128 Alpha amylase, catalytic domain MKW86_05660 PF16657 Maltogenic Amylase, C-terminal domain MKW86_05670 PF04266 ASCH domain MKW86_05680 PF01048 Phosphorylase superfamily MKW86_05685 PF04973 Nicotinamide mononucleotide transporter MKW86_05690 PF02080 TrkA-C domain MKW86_05690 PF03600 Citrate transporter MKW86_05745 PF00455 DeoR C terminal sensor domain MKW86_05745 PF08220 DeoR-like helix-turn-helix domain MKW86_05750 PF08013 Tagatose 6 phosphate kinase MKW86_05755 PF01380 SIS domain MKW86_05760 PF01979 Amidohydrolase family MKW86_05765 PF01116 Fructose-bisphosphate aldolase class-II MKW86_05770 PF03830 PTS system sorbose subfamily IIB component MKW86_05775 PF03609 PTS system sorbose-specific iic component MKW86_05780 PF03613 PTS system mannose/fructose/sorbose family IID component MKW86_05790 PF04962 KduI/IolB family MKW86_05800 PF07470 Glycosyl Hydrolase Family 88 MKW86_05805 PF04055 Radical SAM superfamily MKW86_05805 PF13186 Iron-sulfur cluster-binding domain MKW86_05810 PF00884 Sulfatase MKW86_05820 PF00294 pfkB family carbohydrate kinase MKW86_05825 PF01081 KDPG and KHG aldolase MKW86_05835 PF00884 Sulfatase MKW86_05840 PF06178 Oligogalacturonate-specific porin protein (KdgM) MKW86_05845 PF02278 Polysaccharide lyase family 8, super-sandwich domain MKW86_05845 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain MKW86_05845 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain MKW86_05860 PF01926 50S ribosome-binding GTPase MKW86_05860 PF06071 Protein of unknown function (DUF933) MKW86_05865 PF01195 Peptidyl-tRNA hydrolase MKW86_05870 PF02872 5'-nucleotidase, C-terminal domain MKW86_05870 PF00149 Calcineurin-like phosphoesterase MKW86_05875 PF14572 Phosphoribosyl synthetase-associated domain MKW86_05875 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MKW86_05885 PF08544 GHMP kinases C terminal MKW86_05885 PF00288 GHMP kinases N terminal domain MKW86_05890 PF03550 Outer membrane lipoprotein LolB MKW86_05895 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MKW86_05895 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MKW86_05895 PF01488 Shikimate / quinate 5-dehydrogenase MKW86_05900 PF03462 PCRF domain MKW86_05900 PF00472 RF-1 domain MKW86_05905 PF13847 Methyltransferase domain MKW86_05905 PF17827 PrmC N-terminal domain MKW86_05915 PF13369 Transglutaminase-like superfamily MKW86_05920 PF00793 DAHP synthetase I family MKW86_05925 PF00375 Sodium:dicarboxylate symporter family MKW86_05930 PF01228 Glycine radical MKW86_05935 PF03167 Uracil DNA glycosylase superfamily MKW86_05950 PF00923 Transaldolase/Fructose-6-phosphate aldolase MKW86_05955 PF01235 Sodium:alanine symporter family MKW86_05960 PF11992 Domain of unknown function (DUF3488) MKW86_05960 PF13559 Domain of unknown function (DUF4129) MKW86_05960 PF01841 Transglutaminase-like superfamily MKW86_05970 PF07726 ATPase family associated with various cellular activities (AAA) MKW86_05970 PF17863 AAA lid domain MKW86_05975 PF00144 Beta-lactamase MKW86_05995 PF00854 POT family MKW86_06000 PF03652 Holliday junction resolvase MKW86_06005 PF02622 Uncharacterized ACR, COG1678 MKW86_06010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_06010 PF12729 Four helix bundle sensory module for signal transduction MKW86_06010 PF00672 HAMP domain MKW86_06015 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain MKW86_06015 PF02951 Prokaryotic glutathione synthetase, N-terminal domain MKW86_06020 PF04452 RNA methyltransferase MKW86_06025 PF04231 Endonuclease I MKW86_06030 PF10263 SprT-like family MKW86_06030 PF17283 SprT-like zinc ribbon domain MKW86_06035 PF02773 S-adenosylmethionine synthetase, C-terminal domain MKW86_06035 PF02772 S-adenosylmethionine synthetase, central domain MKW86_06035 PF00438 S-adenosylmethionine synthetase, N-terminal domain MKW86_06040 PF00456 Transketolase, thiamine diphosphate binding domain MKW86_06040 PF02779 Transketolase, pyrimidine binding domain MKW86_06040 PF02780 Transketolase, C-terminal domain MKW86_06050 PF01042 Endoribonuclease L-PSP MKW86_06055 PF01965 DJ-1/PfpI family MKW86_06060 PF03702 Anhydro-N-acetylmuramic acid kinase MKW86_06065 PF01551 Peptidase family M23 MKW86_06065 PF01476 LysM domain MKW86_06065 PF08525 Opacity-associated protein A N-terminal motif MKW86_06070 PF00579 tRNA synthetases class I (W and Y) MKW86_06075 PF01204 Trehalase MKW86_06085 PF01161 Phosphatidylethanolamine-binding protein MKW86_06090 PF00709 Adenylosuccinate synthetase MKW86_06095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_06095 PF03466 LysR substrate binding domain MKW86_06105 PF00155 Aminotransferase class I and II MKW86_06110 PF07690 Major Facilitator Superfamily MKW86_06115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_06115 PF03466 LysR substrate binding domain MKW86_06120 PF00106 short chain dehydrogenase MKW86_06125 PF01343 Peptidase family S49 MKW86_06125 PF08496 Peptidase family S49 N-terminal MKW86_06130 PF04996 Succinylarginine dihydrolase MKW86_06135 PF08272 Topoisomerase I zinc-ribbon-like MKW86_06135 PF01131 DNA topoisomerase MKW86_06135 PF01751 Toprim domain MKW86_06135 PF01396 Topoisomerase DNA binding C4 zinc finger MKW86_06150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_06150 PF08447 PAS fold MKW86_06155 PF00728 Glycosyl hydrolase family 20, catalytic domain MKW86_06155 PF02838 Glycosyl hydrolase family 20, domain 2 MKW86_06160 PF01869 BadF/BadG/BcrA/BcrD ATPase family MKW86_06170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKW86_06170 PF00005 ABC transporter MKW86_06175 PF00005 ABC transporter MKW86_06175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKW86_06180 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_06180 PF12911 N-terminal TM domain of oligopeptide transport permease C MKW86_06185 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_06190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKW86_06195 PF00072 Response regulator receiver domain MKW86_06195 PF09308 LuxQ, periplasmic MKW86_06195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_06195 PF00512 His Kinase A (phospho-acceptor) domain MKW86_06215 PF10725 Protein of unknown function (DUF2517) MKW86_06225 PF05114 Protein of unknown function (DUF692) MKW86_06245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_06245 PF13426 PAS domain MKW86_06245 PF08447 PAS fold MKW86_06255 PF04632 Fusaric acid resistance protein family MKW86_06260 PF00994 Probable molybdopterin binding domain MKW86_06260 PF03453 MoeA N-terminal region (domain I and II) MKW86_06260 PF03454 MoeA C-terminal region (domain IV) MKW86_06265 PF12804 MobA-like NTP transferase domain MKW86_06270 PF00005 ABC transporter MKW86_06275 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_06280 PF12849 PBP superfamily domain MKW86_06285 PF00158 Sigma-54 interaction domain MKW86_06285 PF00072 Response regulator receiver domain MKW86_06285 PF02954 Bacterial regulatory protein, Fis family MKW86_06290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_06290 PF00512 His Kinase A (phospho-acceptor) domain MKW86_06290 PF00989 PAS fold MKW86_06295 PF12727 PBP superfamily domain MKW86_06295 PF12728 Helix-turn-helix domain MKW86_06300 PF02634 FdhD/NarQ family MKW86_06335 PF00384 Molybdopterin oxidoreductase MKW86_06335 PF12838 4Fe-4S dicluster domain MKW86_06335 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MKW86_06335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MKW86_06335 PF00384 Molybdopterin oxidoreductase MKW86_06335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MKW86_06335 PF12838 4Fe-4S dicluster domain MKW86_06335 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MKW86_06335 PF01568 Molydopterin dinucleotide binding domain MKW86_06335 PF01568 Molydopterin dinucleotide binding domain MKW86_06340 PF13247 4Fe-4S dicluster domain MKW86_06350 PF00072 Response regulator receiver domain MKW86_06355 PF00390 Malic enzyme, N-terminal domain MKW86_06355 PF03949 Malic enzyme, NAD binding domain MKW86_06370 PF00860 Permease family MKW86_06375 PF10282 Lactonase, 7-bladed beta-propeller MKW86_06385 PF00924 Mechanosensitive ion channel MKW86_06385 PF12795 Mechanosensitive ion channel porin domain MKW86_06385 PF12794 Mechanosensitive ion channel inner membrane domain 1 MKW86_06390 PF00224 Pyruvate kinase, barrel domain MKW86_06390 PF02887 Pyruvate kinase, alpha/beta domain MKW86_06400 PF04389 Peptidase family M28 MKW86_06400 PF04151 Bacterial pre-peptidase C-terminal domain MKW86_06405 PF00999 Sodium/hydrogen exchanger family MKW86_06405 PF02254 TrkA-N domain MKW86_06420 PF04381 Putative exonuclease, RdgC MKW86_06430 PF00149 Calcineurin-like phosphoesterase MKW86_06430 PF12320 Type 5 capsule protein repressor C-terminal domain MKW86_06435 PF13476 AAA domain MKW86_06445 PF01292 Prokaryotic cytochrome b561 MKW86_06455 PF00990 Diguanylate cyclase, GGDEF domain MKW86_06455 PF00072 Response regulator receiver domain MKW86_06460 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MKW86_06465 PF00391 PEP-utilising enzyme, mobile domain MKW86_06465 PF02896 PEP-utilising enzyme, TIM barrel domain MKW86_06465 PF05524 PEP-utilising enzyme, N-terminal MKW86_06470 PF00381 PTS HPr component phosphorylation site MKW86_06475 PF00291 Pyridoxal-phosphate dependent enzyme MKW86_06480 PF02861 Clp amino terminal domain, pathogenicity island component MKW86_06480 PF00004 ATPase family associated with various cellular activities (AAA) MKW86_06480 PF07724 AAA domain (Cdc48 subfamily) MKW86_06480 PF17871 AAA lid domain MKW86_06480 PF10431 C-terminal, D2-small domain, of ClpB protein MKW86_06490 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MKW86_06490 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MKW86_06495 PF01980 tRNA-methyltransferase O MKW86_06495 PF18389 TrmO C-terminal domain MKW86_06515 PF00664 ABC transporter transmembrane region MKW86_06515 PF00005 ABC transporter MKW86_06520 PF00664 ABC transporter transmembrane region MKW86_06520 PF00005 ABC transporter MKW86_06535 PF00072 Response regulator receiver domain MKW86_06535 PF00486 Transcriptional regulatory protein, C terminal MKW86_06545 PF03737 Aldolase/RraA MKW86_06560 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) MKW86_06565 PF00588 SpoU rRNA Methylase family MKW86_06570 PF00696 Amino acid kinase family MKW86_06570 PF01842 ACT domain MKW86_06570 PF13840 ACT domain MKW86_06570 PF00742 Homoserine dehydrogenase MKW86_06570 PF03447 Homoserine dehydrogenase, NAD binding domain MKW86_06575 PF00288 GHMP kinases N terminal domain MKW86_06575 PF08544 GHMP kinases C terminal MKW86_06580 PF00291 Pyridoxal-phosphate dependent enzyme MKW86_06580 PF14821 Threonine synthase N terminus MKW86_06585 PF13474 SnoaL-like domain MKW86_06590 PF00005 ABC transporter MKW86_06590 PF12848 ABC transporter MKW86_06595 PF02463 RecF/RecN/SMC N terminal domain MKW86_06605 PF01048 Phosphorylase superfamily MKW86_06620 PF00072 Response regulator receiver domain MKW86_06620 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKW86_06620 PF00989 PAS fold MKW86_06620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_06620 PF00512 His Kinase A (phospho-acceptor) domain MKW86_06620 PF01627 Hpt domain MKW86_06625 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase MKW86_06630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MKW86_06630 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MKW86_06635 PF02690 Na+/Pi-cotransporter MKW86_06645 PF13520 Amino acid permease MKW86_06655 PF00324 Amino acid permease MKW86_06660 PF00202 Aminotransferase class-III MKW86_06665 PF00171 Aldehyde dehydrogenase family MKW86_06670 PF07883 Cupin domain MKW86_06670 PF01381 Helix-turn-helix MKW86_06675 PF01266 FAD dependent oxidoreductase MKW86_06690 PF05656 Protein of unknown function (DUF805) MKW86_06705 PF00816 H-NS histone family MKW86_06710 PF00793 DAHP synthetase I family MKW86_06715 PF04954 Siderophore-interacting protein MKW86_06715 PF08021 Siderophore-interacting FAD-binding domain MKW86_06720 PF02321 Outer membrane efflux protein MKW86_06725 PF02687 FtsX-like permease family MKW86_06725 PF12704 MacB-like periplasmic core domain MKW86_06725 PF00005 ABC transporter MKW86_06730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKW86_06740 PF01368 DHH family MKW86_06740 PF02833 DHHA2 domain MKW86_06745 PF02463 RecF/RecN/SMC N terminal domain MKW86_06750 PF01513 ATP-NAD kinase MKW86_06755 PF01025 GrpE MKW86_06760 PF00012 Hsp70 protein MKW86_06765 PF01556 DnaJ C terminal domain MKW86_06765 PF00684 DnaJ central domain MKW86_06765 PF00226 DnaJ domain MKW86_06770 PF02264 LamB porin MKW86_06770 PF11471 Maltoporin periplasmic N-terminal extension MKW86_06775 PF00294 pfkB family carbohydrate kinase MKW86_06780 PF00367 phosphotransferase system, EIIB MKW86_06780 PF02378 Phosphotransferase system, EIIC MKW86_06785 PF08244 Glycosyl hydrolases family 32 C terminal MKW86_06785 PF00251 Glycosyl hydrolases family 32 N-terminal domain MKW86_06790 PF00356 Bacterial regulatory proteins, lacI family MKW86_06790 PF13407 Periplasmic binding protein domain MKW86_06795 PF02308 MgtC family MKW86_06810 PF01022 Bacterial regulatory protein, arsR family MKW86_06815 PF04143 Sulphur transport MKW86_06830 PF00873 AcrB/AcrD/AcrF family MKW86_06835 PF00563 EAL domain MKW86_06835 PF00990 Diguanylate cyclase, GGDEF domain MKW86_06835 PF03707 Bacterial signalling protein N terminal repeat MKW86_06840 PF03099 Biotin/lipoate A/B protein ligase family MKW86_06840 PF10437 Bacterial lipoate protein ligase C-terminus MKW86_06860 PF00873 AcrB/AcrD/AcrF family MKW86_06865 PF00529 HlyD membrane-fusion protein of T1SS MKW86_06865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKW86_06875 PF00873 AcrB/AcrD/AcrF family MKW86_06880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKW86_06885 PF03372 Endonuclease/Exonuclease/phosphatase family MKW86_06900 PF07690 Major Facilitator Superfamily MKW86_06905 PF02424 ApbE family MKW86_06910 PF00127 Copper binding proteins, plastocyanin/azurin family MKW86_06925 PF01156 Inosine-uridine preferring nucleoside hydrolase MKW86_06935 PF00034 Cytochrome c MKW86_06935 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MKW86_06945 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MKW86_06945 PF06481 COX Aromatic Rich Motif MKW86_06950 PF00115 Cytochrome C and Quinol oxidase polypeptide I MKW86_06955 PF00510 Cytochrome c oxidase subunit III MKW86_06960 PF03626 Prokaryotic Cytochrome C oxidase subunit IV MKW86_06965 PF01040 UbiA prenyltransferase family MKW86_06970 PF07690 Major Facilitator Superfamily MKW86_06980 PF00672 HAMP domain MKW86_06980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_06980 PF00512 His Kinase A (phospho-acceptor) domain MKW86_06980 PF01627 Hpt domain MKW86_06980 PF00072 Response regulator receiver domain MKW86_06985 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MKW86_06995 PF00072 Response regulator receiver domain MKW86_06995 PF00486 Transcriptional regulatory protein, C terminal MKW86_07000 PF03264 NapC/NirT cytochrome c family, N-terminal region MKW86_07005 PF01568 Molydopterin dinucleotide binding domain MKW86_07005 PF00384 Molybdopterin oxidoreductase MKW86_07005 PF18364 Molybdopterin oxidoreductase N-terminal domain MKW86_07010 PF02613 Nitrate reductase delta subunit MKW86_07050 PF04002 RadC-like JAB domain MKW86_07085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_07085 PF03466 LysR substrate binding domain MKW86_07100 PF00696 Amino acid kinase family MKW86_07105 PF06545 Protein of unknown function (DUF1116) MKW86_07110 PF02629 CoA binding domain MKW86_07110 PF00549 CoA-ligase MKW86_07115 PF00857 Isochorismatase family MKW86_07130 PF05930 Prophage CP4-57 regulatory protein (AlpA) MKW86_07155 PF07662 Na+ dependent nucleoside transporter C-terminus MKW86_07155 PF01773 Na+ dependent nucleoside transporter N-terminus MKW86_07155 PF07670 Nucleoside recognition MKW86_07220 PF00290 Tryptophan synthase alpha chain MKW86_07225 PF00291 Pyridoxal-phosphate dependent enzyme MKW86_07230 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MKW86_07230 PF00218 Indole-3-glycerol phosphate synthase MKW86_07235 PF02885 Glycosyl transferase family, helical bundle domain MKW86_07235 PF00591 Glycosyl transferase family, a/b domain MKW86_07240 PF00591 Glycosyl transferase family, a/b domain MKW86_07240 PF00117 Glutamine amidotransferase class-I MKW86_07240 PF02885 Glycosyl transferase family, helical bundle domain MKW86_07245 PF04715 Anthranilate synthase component I, N terminal region MKW86_07245 PF00425 chorismate binding enzyme MKW86_07250 PF02811 PHP domain MKW86_07255 PF01300 Telomere recombination MKW86_07260 PF02616 Segregation and condensation protein ScpA MKW86_07265 PF04079 Segregation and condensation complex subunit ScpB MKW86_07270 PF00849 RNA pseudouridylate synthase MKW86_07270 PF01479 S4 domain MKW86_07290 PF08361 MAATS-type transcriptional repressor, C-terminal region MKW86_07290 PF00440 Bacterial regulatory proteins, tetR family MKW86_07295 PF00529 HlyD membrane-fusion protein of T1SS MKW86_07295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKW86_07300 PF00873 AcrB/AcrD/AcrF family MKW86_07305 PF02321 Outer membrane efflux protein MKW86_07310 PF16363 GDP-mannose 4,6 dehydratase MKW86_07315 PF04321 RmlD substrate binding domain MKW86_07320 PF00483 Nucleotidyl transferase MKW86_07325 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase MKW86_07330 PF00535 Glycosyl transferase family 2 MKW86_07340 PF00005 ABC transporter MKW86_07345 PF14307 Glycosyltransferase WbsX MKW86_07345 PF05045 Rhamnan synthesis protein F MKW86_07350 PF00535 Glycosyl transferase family 2 MKW86_07355 PF01370 NAD dependent epimerase/dehydratase family MKW86_07360 PF01507 Phosphoadenosine phosphosulfate reductase family MKW86_07365 PF00009 Elongation factor Tu GTP binding domain MKW86_07370 PF02080 TrkA-C domain MKW86_07370 PF03600 Citrate transporter MKW86_07385 PF01370 NAD dependent epimerase/dehydratase family MKW86_07390 PF00953 Glycosyl transferase family 4 MKW86_07395 PF02719 Polysaccharide biosynthesis protein MKW86_07400 PF02397 Bacterial sugar transferase MKW86_07420 PF08666 SAF domain MKW86_07420 PF03102 NeuB family MKW86_07425 PF13472 GDSL-like Lipase/Acylhydrolase family MKW86_07425 PF02348 Cytidylyltransferase MKW86_07430 PF02350 UDP-N-acetylglucosamine 2-epimerase MKW86_07435 PF01943 Polysaccharide biosynthesis protein MKW86_07445 PF00534 Glycosyl transferases group 1 MKW86_07455 PF00534 Glycosyl transferases group 1 MKW86_07455 PF13439 Glycosyltransferase Family 4 MKW86_07465 PF10531 SLBB domain MKW86_07465 PF18412 Outer-membrane lipoprotein Wza C-terminal domain MKW86_07465 PF02563 Polysaccharide biosynthesis/export protein MKW86_07470 PF01451 Low molecular weight phosphotyrosine protein phosphatase MKW86_07475 PF13807 G-rich domain on putative tyrosine kinase MKW86_07475 PF02706 Chain length determinant protein MKW86_07475 PF13614 AAA domain MKW86_07485 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF MKW86_07490 PF06251 Capsule biosynthesis GfcC MKW86_07495 PF06082 Exopolysaccharide biosynthesis protein YbjH MKW86_07505 PF04337 Protein of unknown function, DUF480 MKW86_07510 PF00176 SNF2 family N-terminal domain MKW86_07510 PF04434 SWIM zinc finger MKW86_07510 PF00271 Helicase conserved C-terminal domain MKW86_07515 PF05472 DNA replication terminus site-binding protein (Ter protein) MKW86_07525 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family MKW86_07530 PF00676 Dehydrogenase E1 component MKW86_07535 PF02779 Transketolase, pyrimidine binding domain MKW86_07535 PF02780 Transketolase, C-terminal domain MKW86_07540 PF02817 e3 binding domain MKW86_07540 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MKW86_07540 PF00364 Biotin-requiring enzyme MKW86_07545 PF00313 'Cold-shock' DNA-binding domain MKW86_07570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKW86_07575 PF00892 EamA-like transporter family MKW86_07580 PF08220 DeoR-like helix-turn-helix domain MKW86_07580 PF00455 DeoR C terminal sensor domain MKW86_07585 PF02901 Pyruvate formate lyase-like MKW86_07585 PF01228 Glycine radical MKW86_07590 PF04055 Radical SAM superfamily MKW86_07595 PF00923 Transaldolase/Fructose-6-phosphate aldolase MKW86_07605 PF01966 HD domain MKW86_07605 PF11871 Domain of unknown function (DUF3391) MKW86_07610 PF00849 RNA pseudouridylate synthase MKW86_07610 PF01479 S4 domain MKW86_07620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKW86_07625 PF12850 Calcineurin-like phosphoesterase superfamily domain MKW86_07640 PF13144 Chaperone for flagella basal body P-ring formation MKW86_07645 PF00072 Response regulator receiver domain MKW86_07645 PF01584 CheW-like domain MKW86_07650 PF01739 CheR methyltransferase, SAM binding domain MKW86_07650 PF03705 CheR methyltransferase, all-alpha domain MKW86_07655 PF00460 Flagella basal body rod protein MKW86_07660 PF00460 Flagella basal body rod protein MKW86_07660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MKW86_07670 PF00460 Flagella basal body rod protein MKW86_07670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MKW86_07670 PF07559 Flagellar basal body protein FlaE MKW86_07675 PF00460 Flagella basal body rod protein MKW86_07675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MKW86_07680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MKW86_07680 PF00460 Flagella basal body rod protein MKW86_07685 PF02107 Flagellar L-ring protein MKW86_07690 PF02119 Flagellar P-ring protein MKW86_07695 PF10135 Rod binding protein MKW86_07695 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MKW86_07700 PF00460 Flagella basal body rod protein MKW86_07700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MKW86_07710 PF01769 Divalent cation transporter MKW86_07710 PF00571 CBS domain MKW86_07710 PF03448 MgtE intracellular N domain MKW86_07715 PF02541 Ppx/GppA phosphatase family MKW86_07720 PF02503 Polyphosphate kinase middle domain MKW86_07720 PF13090 Polyphosphate kinase C-terminal domain 2 MKW86_07720 PF17941 Polyphosphate kinase C-terminal domain 1 MKW86_07720 PF13089 Polyphosphate kinase N-terminal domain MKW86_07725 PF01842 ACT domain MKW86_07735 PF00158 Sigma-54 interaction domain MKW86_07735 PF02954 Bacterial regulatory protein, Fis family MKW86_07735 PF06490 Flagellar regulatory protein FleQ MKW86_07740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_07740 PF00512 His Kinase A (phospho-acceptor) domain MKW86_07740 PF13188 PAS domain MKW86_07745 PF00158 Sigma-54 interaction domain MKW86_07745 PF02954 Bacterial regulatory protein, Fis family MKW86_07745 PF00072 Response regulator receiver domain MKW86_07750 PF01784 NIF3 (NGG1p interacting factor 3) MKW86_07755 PF00551 Formyl transferase MKW86_07760 PF00586 AIR synthase related protein, N-terminal domain MKW86_07760 PF02769 AIR synthase related protein, C-terminal domain MKW86_07775 PF00308 Bacterial dnaA protein MKW86_07780 PF00463 Isocitrate lyase family MKW86_07785 PF01274 Malate synthase MKW86_07800 PF14437 MafB19-like deaminase MKW86_07805 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_07810 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_07815 PF00005 ABC transporter MKW86_07820 PF01895 PhoU domain MKW86_07825 PF01595 Cyclin M transmembrane N-terminal domain MKW86_07825 PF00571 CBS domain MKW86_07825 PF03471 Transporter associated domain MKW86_07840 PF13520 Amino acid permease MKW86_07845 PF04116 Fatty acid hydroxylase superfamily MKW86_07855 PF00005 ABC transporter MKW86_07860 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_07865 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKW86_07870 PF08448 PAS fold MKW86_07870 PF00990 Diguanylate cyclase, GGDEF domain MKW86_07875 PF07690 Major Facilitator Superfamily MKW86_07880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_07880 PF05231 MASE1 MKW86_07880 PF07730 Histidine kinase MKW86_07885 PF00072 Response regulator receiver domain MKW86_07885 PF00196 Bacterial regulatory proteins, luxR family MKW86_07890 PF14760 Rnk N-terminus MKW86_07890 PF01272 Transcription elongation factor, GreA/GreB, C-term MKW86_07905 PF00245 Alkaline phosphatase MKW86_07910 PF00245 Alkaline phosphatase MKW86_07915 PF01926 50S ribosome-binding GTPase MKW86_07920 PF07690 Major Facilitator Superfamily MKW86_07925 PF00850 Histone deacetylase domain MKW86_07935 PF13307 Helicase C-terminal domain MKW86_07935 PF06733 DEAD_2 MKW86_07940 PF13609 Gram-negative porin MKW86_07950 PF00155 Aminotransferase class I and II MKW86_07955 PF05872 Bacterial protein of unknown function (DUF853) MKW86_07970 PF00753 Metallo-beta-lactamase superfamily MKW86_07970 PF03772 Competence protein MKW86_07975 PF00005 ABC transporter MKW86_07975 PF00664 ABC transporter transmembrane region MKW86_07980 PF02606 Tetraacyldisaccharide-1-P 4'-kinase MKW86_07985 PF03966 Trm112p-like protein MKW86_07990 PF02348 Cytidylyltransferase MKW86_07995 PF00072 Response regulator receiver domain MKW86_07995 PF00196 Bacterial regulatory proteins, luxR family MKW86_08000 PF01541 GIY-YIG catalytic domain MKW86_08000 PF02151 UvrB/uvrC motif MKW86_08000 PF08459 UvrC Helix-hairpin-helix N-terminal MKW86_08005 PF01066 CDP-alcohol phosphatidyltransferase MKW86_08025 PF13356 Arm DNA-binding domain MKW86_08025 PF00589 Phage integrase family MKW86_08115 PF08447 PAS fold MKW86_08115 PF13426 PAS domain MKW86_08115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_08120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_08120 PF00672 HAMP domain MKW86_08125 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB MKW86_08130 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) MKW86_08155 PF13247 4Fe-4S dicluster domain MKW86_08155 PF00037 4Fe-4S binding domain MKW86_08160 PF03916 Polysulphide reductase, NrfD MKW86_08165 PF00149 Calcineurin-like phosphoesterase MKW86_08175 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MKW86_08180 PF09190 DALR domain MKW86_08180 PF01406 tRNA synthetases class I (C) catalytic domain MKW86_08200 PF13185 GAF domain MKW86_08200 PF00990 Diguanylate cyclase, GGDEF domain MKW86_08230 PF01169 Uncharacterized protein family UPF0016 MKW86_08235 PF01253 Translation initiation factor SUI1 MKW86_08245 PF07664 Ferrous iron transport protein B C terminus MKW86_08245 PF02421 Ferrous iron transport protein B MKW86_08245 PF07670 Nucleoside recognition MKW86_08260 PF00483 Nucleotidyl transferase MKW86_08265 PF00437 Type II/IV secretion system protein MKW86_08275 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKW86_08275 PF00072 Response regulator receiver domain MKW86_08275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_08275 PF00512 His Kinase A (phospho-acceptor) domain MKW86_08275 PF00989 PAS fold MKW86_08275 PF01627 Hpt domain MKW86_08280 PF01032 FecCD transport family MKW86_08285 PF00005 ABC transporter MKW86_08290 PF00583 Acetyltransferase (GNAT) family MKW86_08295 PF00793 DAHP synthetase I family MKW86_08300 PF01219 Prokaryotic diacylglycerol kinase MKW86_08305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKW86_08305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKW86_08305 PF01842 ACT domain MKW86_08310 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MKW86_08315 PF01812 5-formyltetrahydrofolate cyclo-ligase family MKW86_08325 PF05173 Dihydrodipicolinate reductase, C-terminus MKW86_08325 PF01113 Dihydrodipicolinate reductase, N-terminus MKW86_08340 PF00117 Glutamine amidotransferase class-I MKW86_08340 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MKW86_08345 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MKW86_08345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MKW86_08345 PF02142 MGS-like domain MKW86_08350 PF00682 HMGL-like MKW86_08350 PF08502 LeuA allosteric (dimerisation) domain MKW86_08355 PF07759 Protein of unknown function (DUF1615) MKW86_08360 PF08378 Nuclease-related domain MKW86_08380 PF13302 Acetyltransferase (GNAT) domain MKW86_08385 PF00270 DEAD/DEAH box helicase MKW86_08385 PF00271 Helicase conserved C-terminal domain MKW86_08395 PF14521 Lysine-specific metallo-endopeptidase MKW86_08410 PF00376 MerR family regulatory protein MKW86_08410 PF09278 MerR, DNA binding MKW86_08425 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKW86_08430 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_08435 PF00005 ABC transporter MKW86_08440 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKW86_08440 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MKW86_08445 PF00310 Glutamine amidotransferases class-II MKW86_08445 PF01493 GXGXG motif MKW86_08445 PF01645 Conserved region in glutamate synthase MKW86_08445 PF04898 Glutamate synthase central domain MKW86_08450 PF16199 Radical_SAM C-terminal domain MKW86_08450 PF04055 Radical SAM superfamily MKW86_08455 PF00005 ABC transporter MKW86_08455 PF03412 Peptidase C39 family MKW86_08455 PF00664 ABC transporter transmembrane region MKW86_08505 PF00324 Amino acid permease MKW86_08515 PF03618 Kinase/pyrophosphorylase MKW86_08520 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MKW86_08520 PF02896 PEP-utilising enzyme, TIM barrel domain MKW86_08520 PF00391 PEP-utilising enzyme, mobile domain MKW86_08530 PF14310 Fibronectin type III-like domain MKW86_08530 PF00933 Glycosyl hydrolase family 3 N terminal domain MKW86_08530 PF01915 Glycosyl hydrolase family 3 C-terminal domain MKW86_08540 PF01483 Proprotein convertase P-domain MKW86_08540 PF00082 Subtilase family MKW86_08565 PF03180 NLPA lipoprotein MKW86_08570 PF01569 PAP2 superfamily MKW86_08575 PF11890 Domain of unknown function (DUF3410) MKW86_08575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKW86_08575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKW86_08580 PF02774 Semialdehyde dehydrogenase, dimerisation domain MKW86_08580 PF01118 Semialdehyde dehydrogenase, NAD binding domain MKW86_08590 PF01416 tRNA pseudouridine synthase MKW86_08595 PF01039 Carboxyl transferase domain MKW86_08595 PF17848 Acetyl-coA carboxylase zinc finger domain MKW86_08600 PF02875 Mur ligase family, glutamate ligase domain MKW86_08600 PF08245 Mur ligase middle domain MKW86_08605 PF05036 Sporulation related domain MKW86_08610 PF04358 DsrC like protein MKW86_08615 PF12805 FUSC-like inner membrane protein yccS MKW86_08620 PF01027 Inhibitor of apoptosis-promoting Bax1 MKW86_08640 PF00884 Sulfatase MKW86_08640 PF08019 Phosphoethanolamine transferase EptA/EptB MKW86_08650 PF03706 Lysylphosphatidylglycerol synthase TM region MKW86_08650 PF09924 Uncharacterised conserved protein (DUF2156) MKW86_08660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_08660 PF08447 PAS fold MKW86_08665 PF00990 Diguanylate cyclase, GGDEF domain MKW86_08665 PF00563 EAL domain MKW86_08665 PF13426 PAS domain MKW86_08670 PF00849 RNA pseudouridylate synthase MKW86_08680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MKW86_08685 PF04209 homogentisate 1,2-dioxygenase MKW86_08695 PF14497 Glutathione S-transferase, C-terminal domain MKW86_08695 PF02798 Glutathione S-transferase, N-terminal domain MKW86_08700 PF13417 Glutathione S-transferase, N-terminal domain MKW86_08700 PF00043 Glutathione S-transferase, C-terminal domain MKW86_08710 PF10137 Predicted nucleotide-binding protein containing TIR-like domain MKW86_08720 PF13537 Glutamine amidotransferase domain MKW86_08720 PF00733 Asparagine synthase MKW86_08730 PF00999 Sodium/hydrogen exchanger family MKW86_08730 PF02254 TrkA-N domain MKW86_08735 PF13344 Haloacid dehalogenase-like hydrolase MKW86_08740 PF00962 Adenosine/AMP deaminase MKW86_08745 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MKW86_08750 PF03741 Integral membrane protein TerC family MKW86_08750 PF03471 Transporter associated domain MKW86_08760 PF02913 FAD linked oxidases, C-terminal domain MKW86_08760 PF01565 FAD binding domain MKW86_08760 PF13183 4Fe-4S dicluster domain MKW86_08770 PF03061 Thioesterase superfamily MKW86_08775 PF03880 DbpA RNA binding domain MKW86_08775 PF00271 Helicase conserved C-terminal domain MKW86_08775 PF00270 DEAD/DEAH box helicase MKW86_08785 PF13726 Na+-H+ antiporter family MKW86_08785 PF03553 Na+/H+ antiporter family MKW86_08790 PF00929 Exonuclease MKW86_08795 PF00672 HAMP domain MKW86_08795 PF12729 Four helix bundle sensory module for signal transduction MKW86_08795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_08800 PF18393 MotY N-terminal domain MKW86_08800 PF00691 OmpA family MKW86_08805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MKW86_08810 PF00730 HhH-GPD superfamily base excision DNA repair protein MKW86_08810 PF10576 Iron-sulfur binding domain of endonuclease III MKW86_08810 PF00633 Helix-hairpin-helix motif MKW86_08815 PF02508 Rnf-Nqr subunit, membrane protein MKW86_08820 PF04205 FMN-binding domain MKW86_08825 PF03116 NQR2, RnfD, RnfE family MKW86_08830 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MKW86_08830 PF12838 4Fe-4S dicluster domain MKW86_08830 PF13375 RnfC Barrel sandwich hybrid domain MKW86_08830 PF10531 SLBB domain MKW86_08835 PF04060 Putative Fe-S cluster MKW86_08840 PF02508 Rnf-Nqr subunit, membrane protein MKW86_08845 PF00892 EamA-like transporter family MKW86_08865 PF07055 Enoyl reductase FAD binding domain MKW86_08865 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase MKW86_08865 PF12241 Trans-2-enoyl-CoA reductase catalytic region MKW86_08870 PF03606 C4-dicarboxylate anaerobic carrier MKW86_08875 PF00155 Aminotransferase class I and II MKW86_08885 PF00462 Glutaredoxin MKW86_08890 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family MKW86_08895 PF00271 Helicase conserved C-terminal domain MKW86_08895 PF04851 Type III restriction enzyme, res subunit MKW86_08900 PF00529 HlyD membrane-fusion protein of T1SS MKW86_08900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKW86_08905 PF11742 Protein of unknown function (DUF3302) MKW86_08915 PF02554 Carbon starvation protein CstA MKW86_08920 PF00072 Response regulator receiver domain MKW86_08920 PF04397 LytTr DNA-binding domain MKW86_08925 PF07694 5TMR of 5TMR-LYT MKW86_08925 PF06580 Histidine kinase MKW86_08930 PF01966 HD domain MKW86_08935 PF00171 Aldehyde dehydrogenase family MKW86_08935 PF00465 Iron-containing alcohol dehydrogenase MKW86_08945 PF01914 MarC family integral membrane protein MKW86_08950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKW86_08955 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_08960 PF12911 N-terminal TM domain of oligopeptide transport permease C MKW86_08960 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_08965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKW86_08965 PF00005 ABC transporter MKW86_08970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKW86_08970 PF00005 ABC transporter MKW86_08975 PF03741 Integral membrane protein TerC family MKW86_08980 PF00842 Alanine racemase, C-terminal domain MKW86_08980 PF01168 Alanine racemase, N-terminal domain MKW86_08990 PF00375 Sodium:dicarboxylate symporter family MKW86_09005 PF01979 Amidohydrolase family MKW86_09015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_09015 PF00672 HAMP domain MKW86_09020 PF01230 HIT domain MKW86_09055 PF07549 SecD/SecF GG Motif MKW86_09055 PF02355 Protein export membrane protein MKW86_09055 PF13721 SecD export protein N-terminal TM region MKW86_09060 PF02355 Protein export membrane protein MKW86_09060 PF07549 SecD/SecF GG Motif MKW86_09070 PF05661 Protein of unknown function (DUF808) MKW86_09075 PF08439 Oligopeptidase F MKW86_09075 PF01432 Peptidase family M3 MKW86_09080 PF08439 Oligopeptidase F MKW86_09080 PF01432 Peptidase family M3 MKW86_09085 PF00860 Permease family MKW86_09090 PF05728 Uncharacterised protein family (UPF0227) MKW86_09095 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKW86_09115 PF01906 Putative heavy-metal-binding MKW86_09130 PF01734 Patatin-like phospholipase MKW86_09135 PF17676 LD-carboxypeptidase C-terminal domain MKW86_09135 PF02016 LD-carboxypeptidase N-terminal domain MKW86_09140 PF00884 Sulfatase MKW86_09150 PF01842 ACT domain MKW86_09150 PF00696 Amino acid kinase family MKW86_09155 PF00696 Amino acid kinase family MKW86_09155 PF00583 Acetyltransferase (GNAT) family MKW86_09160 PF01625 Peptide methionine sulfoxide reductase MKW86_09180 PF00561 alpha/beta hydrolase fold MKW86_09185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MKW86_09195 PF03466 LysR substrate binding domain MKW86_09195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_09200 PF02652 L-lactate permease MKW86_09205 PF02754 Cysteine-rich domain MKW86_09210 PF11870 Domain of unknown function (DUF3390) MKW86_09210 PF02589 LUD domain MKW86_09210 PF13183 4Fe-4S dicluster domain MKW86_09215 PF02589 LUD domain MKW86_09220 PF01565 FAD binding domain MKW86_09220 PF02913 FAD linked oxidases, C-terminal domain MKW86_09240 PF12704 MacB-like periplasmic core domain MKW86_09240 PF02687 FtsX-like permease family MKW86_09245 PF00005 ABC transporter MKW86_09255 PF07690 Major Facilitator Superfamily MKW86_09270 PF01593 Flavin containing amine oxidoreductase MKW86_09275 PF03239 Iron permease FTR1 family MKW86_09290 PF03350 Uncharacterized protein family, UPF0114 MKW86_09305 PF00916 Sulfate permease family MKW86_09305 PF01740 STAS domain MKW86_09315 PF00271 Helicase conserved C-terminal domain MKW86_09370 PF04002 RadC-like JAB domain MKW86_09400 PF00239 Resolvase, N terminal domain MKW86_09400 PF02796 Helix-turn-helix domain of resolvase MKW86_09415 PF13148 Protein of unknown function (DUF3987) MKW86_09425 PF00816 H-NS histone family MKW86_09445 PF00529 HlyD membrane-fusion protein of T1SS MKW86_09445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKW86_09455 PF08240 Alcohol dehydrogenase GroES-like domain MKW86_09455 PF00107 Zinc-binding dehydrogenase MKW86_09475 PF01548 Transposase MKW86_09475 PF02371 Transposase IS116/IS110/IS902 family MKW86_09490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_09490 PF00512 His Kinase A (phospho-acceptor) domain MKW86_09490 PF00072 Response regulator receiver domain MKW86_09490 PF09308 LuxQ, periplasmic MKW86_09520 PF00211 Adenylate and Guanylate cyclase catalytic domain MKW86_09520 PF00072 Response regulator receiver domain MKW86_09525 PF00534 Glycosyl transferases group 1 MKW86_09530 PF02397 Bacterial sugar transferase MKW86_09535 PF03552 Cellulose synthase MKW86_09535 PF00535 Glycosyl transferase family 2 MKW86_09535 PF07238 PilZ domain MKW86_09540 PF13439 Glycosyltransferase Family 4 MKW86_09540 PF00534 Glycosyl transferases group 1 MKW86_09605 PF00534 Glycosyl transferases group 1 MKW86_09605 PF13439 Glycosyltransferase Family 4 MKW86_09615 PF13391 HNH endonuclease MKW86_09640 PF00816 H-NS histone family MKW86_09705 PF00589 Phage integrase family MKW86_09705 PF13356 Arm DNA-binding domain MKW86_09720 PF01168 Alanine racemase, N-terminal domain MKW86_09720 PF00842 Alanine racemase, C-terminal domain MKW86_09725 PF12729 Four helix bundle sensory module for signal transduction MKW86_09725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_09725 PF00672 HAMP domain MKW86_09730 PF00990 Diguanylate cyclase, GGDEF domain MKW86_09730 PF00563 EAL domain MKW86_09730 PF03707 Bacterial signalling protein N terminal repeat MKW86_09735 PF01339 CheB methylesterase MKW86_09735 PF00072 Response regulator receiver domain MKW86_09740 PF03705 CheR methyltransferase, all-alpha domain MKW86_09740 PF01739 CheR methyltransferase, SAM binding domain MKW86_09745 PF01584 CheW-like domain MKW86_09750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_09750 PF17202 Single cache domain 3 MKW86_09750 PF00672 HAMP domain MKW86_09755 PF01627 Hpt domain MKW86_09755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_09755 PF09078 CheY binding MKW86_09755 PF02895 Signal transducing histidine kinase, homodimeric domain MKW86_09755 PF01584 CheW-like domain MKW86_09765 PF00072 Response regulator receiver domain MKW86_09770 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MKW86_09770 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal MKW86_09775 PF13247 4Fe-4S dicluster domain MKW86_09780 PF03916 Polysulphide reductase, NrfD MKW86_09785 PF00374 Nickel-dependent hydrogenase MKW86_09790 PF01750 Hydrogenase maturation protease MKW86_09795 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE MKW86_09800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKW86_09805 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_09810 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_09810 PF12911 N-terminal TM domain of oligopeptide transport permease C MKW86_09815 PF00005 ABC transporter MKW86_09820 PF00005 ABC transporter MKW86_09820 PF08402 TOBE domain MKW86_09825 PF02492 CobW/HypB/UreG, nucleotide-binding domain MKW86_09835 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA MKW86_09840 PF02769 AIR synthase related protein, C-terminal domain MKW86_09840 PF00586 AIR synthase related protein, N-terminal domain MKW86_09845 PF01924 Hydrogenase formation hypA family MKW86_09850 PF01455 HupF/HypC family MKW86_09855 PF17788 HypF Kae1-like domain MKW86_09855 PF01300 Telomere recombination MKW86_09855 PF07503 HypF finger MKW86_09855 PF00708 Acylphosphatase MKW86_09860 PF09107 Elongation factor SelB, winged helix MKW86_09860 PF00009 Elongation factor Tu GTP binding domain MKW86_09860 PF03144 Elongation factor Tu domain 2 MKW86_09860 PF09105 Elongation factor SelB, winged helix MKW86_09860 PF09106 Elongation factor SelB, winged helix MKW86_09865 PF12390 Selenocysteine synthase N terminal MKW86_09865 PF03841 L-seryl-tRNA selenium transferase MKW86_09875 PF01750 Hydrogenase maturation protease MKW86_09880 PF07450 Formate hydrogenlyase maturation protein HycH MKW86_09885 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MKW86_09890 PF12838 4Fe-4S dicluster domain MKW86_09895 PF00374 Nickel-dependent hydrogenase MKW86_09895 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MKW86_09895 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MKW86_09900 PF00146 NADH dehydrogenase MKW86_09905 PF00361 Proton-conducting membrane transporter MKW86_09910 PF12798 4Fe-4S binding domain MKW86_09910 PF00037 4Fe-4S binding domain MKW86_09915 PF02705 K+ potassium transporter MKW86_09925 PF13247 4Fe-4S dicluster domain MKW86_09925 PF12800 4Fe-4S binding domain MKW86_09940 PF01590 GAF domain MKW86_09940 PF02954 Bacterial regulatory protein, Fis family MKW86_09940 PF00158 Sigma-54 interaction domain MKW86_09945 PF02634 FdhD/NarQ family MKW86_09950 PF02132 RecR protein MKW86_09950 PF13662 Toprim domain MKW86_09955 PF00183 Hsp90 protein MKW86_09955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_09960 PF05191 Adenylate kinase, active site lid MKW86_09965 PF00762 Ferrochelatase MKW86_09975 PF00294 pfkB family carbohydrate kinase MKW86_09990 PF03707 Bacterial signalling protein N terminal repeat MKW86_09990 PF00990 Diguanylate cyclase, GGDEF domain MKW86_09990 PF00563 EAL domain MKW86_09995 PF00483 Nucleotidyl transferase MKW86_10005 PF07273 Protein of unknown function (DUF1439) MKW86_10010 PF00425 chorismate binding enzyme MKW86_10020 PF00550 Phosphopantetheine attachment site MKW86_10020 PF00857 Isochorismatase family MKW86_10025 PF00668 Condensation domain MKW86_10025 PF00501 AMP-binding enzyme MKW86_10025 PF00550 Phosphopantetheine attachment site MKW86_10025 PF00975 Thioesterase domain MKW86_10025 PF13193 AMP-binding enzyme C-terminal domain MKW86_10035 PF07993 Male sterility protein MKW86_10035 PF00550 Phosphopantetheine attachment site MKW86_10035 PF00501 AMP-binding enzyme MKW86_10035 PF00668 Condensation domain MKW86_10035 PF13193 AMP-binding enzyme C-terminal domain MKW86_10040 PF00975 Thioesterase domain MKW86_10040 PF00501 AMP-binding enzyme MKW86_10040 PF13193 AMP-binding enzyme C-terminal domain MKW86_10040 PF00668 Condensation domain MKW86_10040 PF00550 Phosphopantetheine attachment site MKW86_10045 PF01497 Periplasmic binding protein MKW86_10050 PF17837 4'-phosphopantetheinyl transferase N-terminal domain MKW86_10050 PF01648 4'-phosphopantetheinyl transferase superfamily MKW86_10055 PF00005 ABC transporter MKW86_10060 PF01032 FecCD transport family MKW86_10065 PF01032 FecCD transport family MKW86_10070 PF07715 TonB-dependent Receptor Plug Domain MKW86_10070 PF00593 TonB dependent receptor MKW86_10085 PF11143 Protein of unknown function (DUF2919) MKW86_10090 PF01544 CorA-like Mg2+ transporter protein MKW86_10100 PF01012 Electron transfer flavoprotein domain MKW86_10105 PF01012 Electron transfer flavoprotein domain MKW86_10105 PF00766 Electron transfer flavoprotein FAD-binding domain MKW86_10110 PF00266 Aminotransferase class-V MKW86_10115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MKW86_10120 PF00793 DAHP synthetase I family MKW86_10125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_10125 PF00672 HAMP domain MKW86_10130 PF04055 Radical SAM superfamily MKW86_10135 PF02601 Exonuclease VII, large subunit MKW86_10135 PF13742 OB-fold nucleic acid binding domain MKW86_10140 PF00892 EamA-like transporter family MKW86_10145 PF02472 Biopolymer transport protein ExbD/TolR MKW86_10150 PF01618 MotA/TolQ/ExbB proton channel family MKW86_10160 PF00884 Sulfatase MKW86_10165 PF04055 Radical SAM superfamily MKW86_10165 PF13186 Iron-sulfur cluster-binding domain MKW86_10175 PF02705 K+ potassium transporter MKW86_10180 PF00478 IMP dehydrogenase / GMP reductase domain MKW86_10180 PF00571 CBS domain MKW86_10185 PF02540 NAD synthase MKW86_10185 PF00958 GMP synthase C terminal domain MKW86_10185 PF00117 Glutamine amidotransferase class-I MKW86_10205 PF02805 Metal binding domain of Ada MKW86_10205 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MKW86_10205 PF12833 Helix-turn-helix domain MKW86_10205 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MKW86_10220 PF05724 Thiopurine S-methyltransferase (TPMT) MKW86_10225 PF05193 Peptidase M16 inactive domain MKW86_10225 PF00675 Insulinase (Peptidase family M16) MKW86_10230 PF00300 Histidine phosphatase superfamily (branch 1) MKW86_10240 PF00892 EamA-like transporter family MKW86_10245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKW86_10250 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain MKW86_10255 PF00271 Helicase conserved C-terminal domain MKW86_10255 PF02559 CarD-like/TRCF domain MKW86_10255 PF00270 DEAD/DEAH box helicase MKW86_10255 PF03461 TRCF domain MKW86_10255 PF17757 UvrB interaction domain MKW86_10265 PF02687 FtsX-like permease family MKW86_10265 PF12704 MacB-like periplasmic core domain MKW86_10270 PF00005 ABC transporter MKW86_10275 PF12704 MacB-like periplasmic core domain MKW86_10275 PF02687 FtsX-like permease family MKW86_10290 PF05698 Bacterial trigger factor protein (TF) C-terminus MKW86_10290 PF05697 Bacterial trigger factor protein (TF) MKW86_10290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MKW86_10295 PF00574 Clp protease MKW86_10300 PF10431 C-terminal, D2-small domain, of ClpB protein MKW86_10300 PF06689 ClpX C4-type zinc finger MKW86_10300 PF07724 AAA domain (Cdc48 subfamily) MKW86_10305 PF02190 ATP-dependent protease La (LON) substrate-binding domain MKW86_10305 PF05362 Lon protease (S16) C-terminal proteolytic domain MKW86_10305 PF00004 ATPase family associated with various cellular activities (AAA) MKW86_10310 PF00216 Bacterial DNA-binding protein MKW86_10315 PF13145 PPIC-type PPIASE domain MKW86_10320 PF12848 ABC transporter MKW86_10320 PF00005 ABC transporter MKW86_10325 PF00474 Sodium:solute symporter family MKW86_10330 PF04341 Protein of unknown function, DUF485 MKW86_10345 PF00378 Enoyl-CoA hydratase/isomerase MKW86_10380 PF01235 Sodium:alanine symporter family MKW86_10390 PF06167 Glucose-regulated metallo-peptidase M90 MKW86_10395 PF01184 GPR1/FUN34/yaaH family MKW86_10410 PF00376 MerR family regulatory protein MKW86_10410 PF09278 MerR, DNA binding MKW86_10415 PF00682 HMGL-like MKW86_10420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MKW86_10420 PF02785 Biotin carboxylase C-terminal domain MKW86_10420 PF00364 Biotin-requiring enzyme MKW86_10420 PF00289 Biotin carboxylase, N-terminal domain MKW86_10425 PF00378 Enoyl-CoA hydratase/isomerase MKW86_10430 PF01039 Carboxyl transferase domain MKW86_10435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MKW86_10435 PF02770 Acyl-CoA dehydrogenase, middle domain MKW86_10435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MKW86_10440 PF00171 Aldehyde dehydrogenase family MKW86_10445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MKW86_10445 PF02770 Acyl-CoA dehydrogenase, middle domain MKW86_10445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MKW86_10450 PF00378 Enoyl-CoA hydratase/isomerase MKW86_10455 PF00378 Enoyl-CoA hydratase/isomerase MKW86_10460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MKW86_10460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MKW86_10470 PF13520 Amino acid permease MKW86_10475 PF01925 Sulfite exporter TauE/SafE MKW86_10495 PF00990 Diguanylate cyclase, GGDEF domain MKW86_10495 PF00563 EAL domain MKW86_10495 PF13188 PAS domain MKW86_10495 PF03707 Bacterial signalling protein N terminal repeat MKW86_10500 PF03466 LysR substrate binding domain MKW86_10500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_10505 PF00232 Glycosyl hydrolase family 1 MKW86_10510 PF03707 Bacterial signalling protein N terminal repeat MKW86_10510 PF00990 Diguanylate cyclase, GGDEF domain MKW86_10510 PF13188 PAS domain MKW86_10510 PF00563 EAL domain MKW86_10525 PF01966 HD domain MKW86_10535 PF03466 LysR substrate binding domain MKW86_10535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_10540 PF01261 Xylose isomerase-like TIM barrel MKW86_10545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MKW86_10545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MKW86_10550 PF03466 LysR substrate binding domain MKW86_10550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_10560 PF03279 Bacterial lipid A biosynthesis acyltransferase MKW86_10565 PF03279 Bacterial lipid A biosynthesis acyltransferase MKW86_10580 PF17151 Periplasmic sensor domain MKW86_10580 PF00990 Diguanylate cyclase, GGDEF domain MKW86_10590 PF03104 DNA polymerase family B, exonuclease domain MKW86_10590 PF00136 DNA polymerase family B MKW86_10620 PF01554 MatE MKW86_10625 PF06786 Uncharacterised protein family (UPF0253) MKW86_10630 PF00677 Lumazine binding domain MKW86_10640 PF13419 Haloacid dehalogenase-like hydrolase MKW86_10645 PF01370 NAD dependent epimerase/dehydratase family MKW86_10645 PF02222 ATP-grasp domain MKW86_10650 PF00892 EamA-like transporter family MKW86_10655 PF02525 Flavodoxin-like fold MKW86_10680 PF13509 S1 domain MKW86_10680 PF17783 CvfB-like winged helix domain MKW86_10690 PF04269 Protein of unknown function, DUF440 MKW86_10695 PF00912 Transglycosylase MKW86_10700 PF04269 Protein of unknown function, DUF440 MKW86_10705 PF03776 Septum formation topological specificity factor MinE MKW86_10710 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MKW86_10715 PF05209 Septum formation inhibitor MinC, N-terminal domain MKW86_10715 PF03775 Septum formation inhibitor MinC, C-terminal domain MKW86_10720 PF05166 YcgL domain MKW86_10725 PF13406 Transglycosylase SLT domain MKW86_10730 PF03315 Serine dehydratase beta chain MKW86_10730 PF03313 Serine dehydratase alpha chain MKW86_10735 PF03313 Serine dehydratase alpha chain MKW86_10735 PF03315 Serine dehydratase beta chain MKW86_10740 PF06865 Pyrimidine/purine nucleoside phosphorylase MKW86_10745 PF00375 Sodium:dicarboxylate symporter family MKW86_10750 PF09278 MerR, DNA binding MKW86_10750 PF00376 MerR family regulatory protein MKW86_10755 PF02803 Thiolase, C-terminal domain MKW86_10755 PF00108 Thiolase, N-terminal domain MKW86_10760 PF00563 EAL domain MKW86_10760 PF08668 HDOD domain MKW86_10765 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) MKW86_10775 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) MKW86_10785 PF08281 Sigma-70, region 4 MKW86_10785 PF04542 Sigma-70 region 2 MKW86_10810 PF01882 Protein of unknown function DUF58 MKW86_10815 PF07726 ATPase family associated with various cellular activities (AAA) MKW86_10815 PF17863 AAA lid domain MKW86_10820 PF02803 Thiolase, C-terminal domain MKW86_10820 PF00108 Thiolase, N-terminal domain MKW86_10825 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MKW86_10825 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MKW86_10825 PF00378 Enoyl-CoA hydratase/isomerase MKW86_10835 PF07152 YaeQ protein MKW86_10845 PF00158 Sigma-54 interaction domain MKW86_10845 PF02954 Bacterial regulatory protein, Fis family MKW86_10845 PF13188 PAS domain MKW86_10850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MKW86_10850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MKW86_10855 PF00291 Pyridoxal-phosphate dependent enzyme MKW86_10860 PF07687 Peptidase dimerisation domain MKW86_10860 PF01546 Peptidase family M20/M25/M40 MKW86_10865 PF01979 Amidohydrolase family MKW86_10870 PF00696 Amino acid kinase family MKW86_10875 PF00892 EamA-like transporter family MKW86_10880 PF02625 XdhC and CoxI family MKW86_10880 PF13478 XdhC Rossmann domain MKW86_10895 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKW86_10895 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MKW86_10900 PF01979 Amidohydrolase family MKW86_10905 PF00941 FAD binding domain in molybdopterin dehydrogenase MKW86_10910 PF01799 [2Fe-2S] binding domain MKW86_10910 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MKW86_10910 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MKW86_10915 PF00860 Permease family MKW86_10920 PF01979 Amidohydrolase family MKW86_10925 PF00860 Permease family MKW86_10930 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MKW86_10930 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MKW86_10935 PF00941 FAD binding domain in molybdopterin dehydrogenase MKW86_10935 PF03450 CO dehydrogenase flavoprotein C-terminal domain MKW86_10940 PF00111 2Fe-2S iron-sulfur cluster binding domain MKW86_10940 PF01799 [2Fe-2S] binding domain MKW86_10950 PF05433 Glycine zipper 2TM domain MKW86_10960 PF03606 C4-dicarboxylate anaerobic carrier MKW86_10965 PF00501 AMP-binding enzyme MKW86_10965 PF13193 AMP-binding enzyme C-terminal domain MKW86_10980 PF01502 Phosphoribosyl-AMP cyclohydrolase MKW86_10980 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase MKW86_10985 PF00977 Histidine biosynthesis protein MKW86_10990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_10990 PF00512 His Kinase A (phospho-acceptor) domain MKW86_10990 PF01627 Hpt domain MKW86_10990 PF00072 Response regulator receiver domain MKW86_10995 PF08448 PAS fold MKW86_10995 PF00990 Diguanylate cyclase, GGDEF domain MKW86_11000 PF00072 Response regulator receiver domain MKW86_11005 PF00977 Histidine biosynthesis protein MKW86_11010 PF00117 Glutamine amidotransferase class-I MKW86_11015 PF08645 Polynucleotide kinase 3 phosphatase MKW86_11015 PF00475 Imidazoleglycerol-phosphate dehydratase MKW86_11020 PF00155 Aminotransferase class I and II MKW86_11025 PF00815 Histidinol dehydrogenase MKW86_11030 PF08029 HisG, C-terminal domain MKW86_11030 PF01634 ATP phosphoribosyltransferase MKW86_11040 PF04851 Type III restriction enzyme, res subunit MKW86_11040 PF13307 Helicase C-terminal domain MKW86_11045 PF00814 Glycoprotease family MKW86_11055 PF12697 Alpha/beta hydrolase family MKW86_11055 PF08241 Methyltransferase domain MKW86_11060 PF00501 AMP-binding enzyme MKW86_11060 PF13193 AMP-binding enzyme C-terminal domain MKW86_11065 PF01612 3'-5' exonuclease MKW86_11065 PF00570 HRDC domain MKW86_11070 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKW86_11080 PF01207 Dihydrouridine synthase (Dus) MKW86_11085 PF04304 Protein of unknown function (DUF454) MKW86_11090 PF00156 Phosphoribosyl transferase domain MKW86_11095 PF12169 DNA polymerase III subunits gamma and tau domain III MKW86_11095 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding MKW86_11095 PF12170 DNA polymerase III tau subunit V interacting with alpha MKW86_11100 PF02575 YbaB/EbfC DNA-binding family MKW86_11110 PF00196 Bacterial regulatory proteins, luxR family MKW86_11110 PF00072 Response regulator receiver domain MKW86_11115 PF01743 Poly A polymerase head domain MKW86_11115 PF01368 DHH family MKW86_11115 PF00571 CBS domain MKW86_11115 PF02272 DHHA1 domain MKW86_11120 PF00270 DEAD/DEAH box helicase MKW86_11120 PF11898 Domain of unknown function (DUF3418) MKW86_11120 PF04408 Helicase associated domain (HA2) MKW86_11120 PF00271 Helicase conserved C-terminal domain MKW86_11120 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold MKW86_11130 PF01386 Ribosomal L25p family MKW86_11135 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MKW86_11135 PF00072 Response regulator receiver domain MKW86_11135 PF00512 His Kinase A (phospho-acceptor) domain MKW86_11135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_11135 PF00672 HAMP domain MKW86_11135 PF01627 Hpt domain MKW86_11140 PF00072 Response regulator receiver domain MKW86_11145 PF00753 Metallo-beta-lactamase superfamily MKW86_11155 PF00586 AIR synthase related protein, N-terminal domain MKW86_11155 PF02769 AIR synthase related protein, C-terminal domain MKW86_11170 PF10672 S-adenosylmethionine-dependent methyltransferase MKW86_11170 PF17785 PUA-like domain MKW86_11180 PF00700 Bacterial flagellin C-terminal helical region MKW86_11180 PF00669 Bacterial flagellin N-terminal helical region MKW86_11190 PF00708 Acylphosphatase MKW86_11195 PF02798 Glutathione S-transferase, N-terminal domain MKW86_11195 PF00043 Glutathione S-transferase, C-terminal domain MKW86_11200 PF08264 Anticodon-binding domain of tRNA MKW86_11200 PF01588 Putative tRNA binding domain MKW86_11200 PF09334 tRNA synthetases class I (M) MKW86_11205 PF10609 NUBPL iron-transfer P-loop NTPase MKW86_11210 PF00485 Phosphoribulokinase / Uridine kinase family MKW86_11215 PF00692 dUTPase MKW86_11220 PF01384 Phosphate transporter family MKW86_11225 PF00575 S1 RNA binding domain MKW86_11225 PF10150 Ribonuclease E/G family MKW86_11225 PF12111 Polyribonucleotide phosphorylase C terminal MKW86_11230 PF01479 S4 domain MKW86_11230 PF00849 RNA pseudouridylate synthase MKW86_11235 PF13419 Haloacid dehalogenase-like hydrolase MKW86_11240 PF02545 Maf-like protein MKW86_11245 PF07690 Major Facilitator Superfamily MKW86_11250 PF03466 LysR substrate binding domain MKW86_11250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_11260 PF02620 Large ribosomal RNA subunit accumulation protein YceD MKW86_11265 PF01783 Ribosomal L32p protein family MKW86_11270 PF02504 Fatty acid synthesis protein MKW86_11275 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MKW86_11275 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MKW86_11280 PF00698 Acyl transferase domain MKW86_11290 PF00550 Phosphopantetheine attachment site MKW86_11295 PF02801 Beta-ketoacyl synthase, C-terminal domain MKW86_11295 PF00109 Beta-ketoacyl synthase, N-terminal domain MKW86_11300 PF01063 Amino-transferase class IV MKW86_11305 PF02618 YceG-like family MKW86_11310 PF02223 Thymidylate kinase MKW86_11315 PF09115 DNA polymerase III, delta subunit, C terminal MKW86_11320 PF01026 TatD related DNase MKW86_11325 PF00589 Phage integrase family MKW86_11335 PF01189 16S rRNA methyltransferase RsmB/F MKW86_11335 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF MKW86_11335 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF MKW86_11340 PF02470 MlaD protein MKW86_11345 PF04403 Paraquat-inducible protein A MKW86_11360 PF00285 Citrate synthase, C-terminal domain MKW86_11365 PF03972 MmgE/PrpD family MKW86_11380 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain MKW86_11380 PF06974 Protein of unknown function (DUF1298) MKW86_11405 PF00106 short chain dehydrogenase MKW86_11415 PF07130 YebG protein MKW86_11425 PF13654 AAA domain MKW86_11425 PF05362 Lon protease (S16) C-terminal proteolytic domain MKW86_11430 PF07977 FabA-like domain MKW86_11435 PF04957 Ribosome modulation factor MKW86_11455 PF02926 THUMP domain MKW86_11455 PF01170 Putative RNA methylase family UPF0020 MKW86_11455 PF10672 S-adenosylmethionine-dependent methyltransferase MKW86_11460 PF07126 Cell-division protein ZapC MKW86_11465 PF01180 Dihydroorotate dehydrogenase MKW86_11470 PF05088 Bacterial NAD-glutamate dehydrogenase MKW86_11480 PF01433 Peptidase family M1 domain MKW86_11480 PF17432 Domain of unknown function (DUF3458_C) ARM repeats MKW86_11480 PF11940 Domain of unknown function (DUF3458) Ig-like fold MKW86_11485 PF11818 C-terminal domain of tail specific protease (DUF3340) MKW86_11485 PF00595 PDZ domain MKW86_11485 PF03572 Peptidase family S41 MKW86_11485 PF17804 Tail specific protease N-terminal domain MKW86_11490 PF04352 ProQ/FINO family MKW86_11490 PF17516 ProQ C-terminal domain MKW86_11495 PF13185 GAF domain MKW86_11505 PF00115 Cytochrome C and Quinol oxidase polypeptide I MKW86_11520 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP MKW86_11520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MKW86_11530 PF00403 Heavy-metal-associated domain MKW86_11545 PF00027 Cyclic nucleotide-binding domain MKW86_11545 PF13545 Crp-like helix-turn-helix domain MKW86_11550 PF00582 Universal stress protein family MKW86_11555 PF01171 PP-loop family MKW86_11570 PF13417 Glutathione S-transferase, N-terminal domain MKW86_11575 PF05025 RbsD / FucU transport protein family MKW86_11580 PF00005 ABC transporter MKW86_11585 PF02653 Branched-chain amino acid transport system / permease component MKW86_11590 PF13407 Periplasmic binding protein domain MKW86_11595 PF00294 pfkB family carbohydrate kinase MKW86_11600 PF00356 Bacterial regulatory proteins, lacI family MKW86_11605 PF00990 Diguanylate cyclase, GGDEF domain MKW86_11605 PF17152 Periplasmic sensor domain MKW86_11615 PF02146 Sir2 family MKW86_11630 PF09456 RcsC Alpha-Beta-Loop (ABL) MKW86_11630 PF00072 Response regulator receiver domain MKW86_11630 PF00512 His Kinase A (phospho-acceptor) domain MKW86_11630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_11635 PF00216 Bacterial DNA-binding protein MKW86_11640 PF03483 B3/4 domain MKW86_11640 PF03484 tRNA synthetase B5 domain MKW86_11640 PF03147 Ferredoxin-fold anticodon binding domain MKW86_11640 PF01588 Putative tRNA binding domain MKW86_11640 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MKW86_11645 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MKW86_11645 PF01409 tRNA synthetases class II core domain (F) MKW86_11650 PF00453 Ribosomal protein L20 MKW86_11655 PF01632 Ribosomal protein L35 MKW86_11660 PF00707 Translation initiation factor IF-3, C-terminal domain MKW86_11660 PF05198 Translation initiation factor IF-3, N-terminal domain MKW86_11665 PF02824 TGS domain MKW86_11665 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MKW86_11665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MKW86_11665 PF03129 Anticodon binding domain MKW86_11675 PF04055 Radical SAM superfamily MKW86_11685 PF03989 DNA gyrase C-terminal domain, beta-propeller MKW86_11685 PF00521 DNA gyrase/topoisomerase IV, subunit A MKW86_11695 PF13419 Haloacid dehalogenase-like hydrolase MKW86_11700 PF03477 ATP cone domain MKW86_11700 PF02867 Ribonucleotide reductase, barrel domain MKW86_11700 PF00317 Ribonucleotide reductase, all-alpha domain MKW86_11705 PF00268 Ribonucleotide reductase, small chain MKW86_11710 PF00111 2Fe-2S iron-sulfur cluster binding domain MKW86_11715 PF06725 3D domain MKW86_11715 PF03562 MltA specific insert domain MKW86_11720 PF06945 Protein of unknown function (DUF1289) MKW86_11730 PF03613 PTS system mannose/fructose/sorbose family IID component MKW86_11735 PF03609 PTS system sorbose-specific iic component MKW86_11740 PF03830 PTS system sorbose subfamily IIB component MKW86_11740 PF03610 PTS system fructose IIA component MKW86_11755 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MKW86_11755 PF00356 Bacterial regulatory proteins, lacI family MKW86_11760 PF06560 Glucose-6-phosphate isomerase (GPI) MKW86_11765 PF02378 Phosphotransferase system, EIIC MKW86_11765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKW86_11770 PF00294 pfkB family carbohydrate kinase MKW86_11775 PF00381 PTS HPr component phosphorylation site MKW86_11775 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKW86_11780 PF00356 Bacterial regulatory proteins, lacI family MKW86_11780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MKW86_11785 PF03222 Tryptophan/tyrosine permease family MKW86_11800 PF00271 Helicase conserved C-terminal domain MKW86_11800 PF00270 DEAD/DEAH box helicase MKW86_11810 PF01264 Chorismate synthase MKW86_11815 PF05175 Methyltransferase small domain MKW86_11820 PF01713 Smr domain MKW86_11830 PF08448 PAS fold MKW86_11830 PF00990 Diguanylate cyclase, GGDEF domain MKW86_11835 PF00934 PE family MKW86_11835 PF00300 Histidine phosphatase superfamily (branch 1) MKW86_11850 PF00704 Glycosyl hydrolases family 18 MKW86_11850 PF08329 Chitinase A, N-terminal domain MKW86_11860 PF03831 PhnA domain MKW86_11860 PF08274 PhnA Zinc-Ribbon MKW86_11870 PF02567 Phenazine biosynthesis-like protein MKW86_11900 PF01327 Polypeptide deformylase MKW86_11910 PF03330 Lytic transglycolase MKW86_11915 PF16330 MukB hinge domain MKW86_11915 PF04310 MukB N-terminal MKW86_11920 PF04288 MukE-like family MKW86_11925 PF17192 MukF middle domain MKW86_11925 PF17193 MukF C-terminal domain MKW86_11925 PF03882 MukF winged-helix domain MKW86_11930 PF13847 Methyltransferase domain MKW86_11935 PF02698 DUF218 domain MKW86_11940 PF00121 Triosephosphate isomerase MKW86_11945 PF00365 Phosphofructokinase MKW86_11950 PF07687 Peptidase dimerisation domain MKW86_11950 PF01546 Peptidase family M20/M25/M40 MKW86_11955 PF13419 Haloacid dehalogenase-like hydrolase MKW86_11960 PF02789 Cytosol aminopeptidase family, N-terminal domain MKW86_11960 PF00883 Cytosol aminopeptidase family, catalytic domain MKW86_12000 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MKW86_12000 PF00128 Alpha amylase, catalytic domain MKW86_12010 PF11398 Protein of unknown function (DUF2813) MKW86_12015 PF14525 AraC-binding-like domain MKW86_12015 PF12833 Helix-turn-helix domain MKW86_12025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_12025 PF03466 LysR substrate binding domain MKW86_12030 PF01925 Sulfite exporter TauE/SafE MKW86_12040 PF03942 DTW domain MKW86_12045 PF18029 Glyoxalase-like domain MKW86_12045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MKW86_12050 PF07478 D-ala D-ala ligase C-terminus MKW86_12050 PF01820 D-ala D-ala ligase N-terminus MKW86_12060 PF00255 Glutathione peroxidase MKW86_12065 PF00271 Helicase conserved C-terminal domain MKW86_12065 PF00270 DEAD/DEAH box helicase MKW86_12070 PF13673 Acetyltransferase (GNAT) domain MKW86_12080 PF02694 Uncharacterised BCR, YnfA/UPF0060 family MKW86_12090 PF01928 CYTH domain MKW86_12100 PF00583 Acetyltransferase (GNAT) family MKW86_12105 PF00465 Iron-containing alcohol dehydrogenase MKW86_12110 PF03992 Antibiotic biosynthesis monooxygenase MKW86_12115 PF08543 Phosphomethylpyrimidine kinase MKW86_12135 PF00561 alpha/beta hydrolase fold MKW86_12135 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus MKW86_12140 PF01575 MaoC like domain MKW86_12160 PF00005 ABC transporter MKW86_12160 PF00664 ABC transporter transmembrane region MKW86_12165 PF00005 ABC transporter MKW86_12165 PF00664 ABC transporter transmembrane region MKW86_12170 PF00512 His Kinase A (phospho-acceptor) domain MKW86_12170 PF00672 HAMP domain MKW86_12170 PF00072 Response regulator receiver domain MKW86_12170 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MKW86_12170 PF01627 Hpt domain MKW86_12170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_12175 PF00085 Thioredoxin MKW86_12180 PF00939 Sodium:sulfate symporter transmembrane region MKW86_12190 PF00343 Carbohydrate phosphorylase MKW86_12210 PF04715 Anthranilate synthase component I, N terminal region MKW86_12210 PF00425 chorismate binding enzyme MKW86_12215 PF00293 NUDIX domain MKW86_12220 PF03222 Tryptophan/tyrosine permease family MKW86_12225 PF00375 Sodium:dicarboxylate symporter family MKW86_12230 PF00270 DEAD/DEAH box helicase MKW86_12230 PF00271 Helicase conserved C-terminal domain MKW86_12230 PF00570 HRDC domain MKW86_12230 PF16124 RecQ zinc-binding MKW86_12230 PF09382 RQC domain MKW86_12235 PF06798 PrkA serine protein kinase C-terminal domain MKW86_12235 PF08298 PrkA AAA domain MKW86_12240 PF04285 Protein of unknown function (DUF444) MKW86_12245 PF04293 SpoVR like protein MKW86_12250 PF07840 FadR C-terminal domain MKW86_12250 PF00392 Bacterial regulatory proteins, gntR family MKW86_12255 PF06450 Bacterial Na+/H+ antiporter B (NhaB) MKW86_12265 PF02600 Disulfide bond formation protein DsbB MKW86_12270 PF09335 SNARE associated Golgi protein MKW86_12280 PF12344 Ultra-violet resistance protein B MKW86_12280 PF02151 UvrB/uvrC motif MKW86_12280 PF04851 Type III restriction enzyme, res subunit MKW86_12280 PF17757 UvrB interaction domain MKW86_12280 PF00271 Helicase conserved C-terminal domain MKW86_12290 PF02080 TrkA-C domain MKW86_12290 PF06826 Predicted Permease Membrane Region MKW86_12295 PF01464 Transglycosylase SLT domain MKW86_12295 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKW86_12310 PF01970 Tripartite tricarboxylate transporter TctA family MKW86_12315 PF08279 HTH domain MKW86_12315 PF12431 Transcriptional regulator MKW86_12315 PF00072 Response regulator receiver domain MKW86_12320 PF17203 Single cache domain 3 MKW86_12320 PF00989 PAS fold MKW86_12320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_12320 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain MKW86_12325 PF00480 ROK family MKW86_12325 PF01047 MarR family MKW86_12330 PF17200 Single Cache domain 2 MKW86_12330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_12330 PF00672 HAMP domain MKW86_12335 PF02810 SEC-C motif MKW86_12340 PF01266 FAD dependent oxidoreductase MKW86_12340 PF04324 BFD-like [2Fe-2S] binding domain MKW86_12345 PF00890 FAD binding domain MKW86_12350 PF02754 Cysteine-rich domain MKW86_12350 PF13183 4Fe-4S dicluster domain MKW86_12365 PF02335 Cytochrome c552 MKW86_12370 PF13435 Cytochrome c554 and c-prime MKW86_12370 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) MKW86_12375 PF00037 4Fe-4S binding domain MKW86_12375 PF13247 4Fe-4S dicluster domain MKW86_12380 PF03916 Polysulphide reductase, NrfD MKW86_12385 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal MKW86_12385 PF01578 Cytochrome C assembly protein MKW86_12390 PF08534 Redoxin MKW86_12395 PF03918 Cytochrome C biogenesis protein MKW86_12400 PF00293 NUDIX domain MKW86_12405 PF00768 D-alanyl-D-alanine carboxypeptidase MKW86_12410 PF01212 Beta-eliminating lyase MKW86_12420 PF04244 Deoxyribodipyrimidine photo-lyase-related protein MKW86_12425 PF01266 FAD dependent oxidoreductase MKW86_12435 PF07969 Amidohydrolase family MKW86_12440 PF00571 CBS domain MKW86_12440 PF00478 IMP dehydrogenase / GMP reductase domain MKW86_12450 PF01717 Cobalamin-independent synthase, Catalytic domain MKW86_12450 PF08267 Cobalamin-independent synthase, N-terminal domain MKW86_12455 PF03466 LysR substrate binding domain MKW86_12455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_12465 PF07715 TonB-dependent Receptor Plug Domain MKW86_12465 PF00593 TonB dependent receptor MKW86_12470 PF12833 Helix-turn-helix domain MKW86_12475 PF00106 short chain dehydrogenase MKW86_12480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_12480 PF03466 LysR substrate binding domain MKW86_12485 PF13460 NAD(P)H-binding MKW86_12495 PF01053 Cys/Met metabolism PLP-dependent enzyme MKW86_12500 PF00675 Insulinase (Peptidase family M16) MKW86_12500 PF05193 Peptidase M16 inactive domain MKW86_12505 PF01118 Semialdehyde dehydrogenase, NAD binding domain MKW86_12505 PF02774 Semialdehyde dehydrogenase, dimerisation domain MKW86_12510 PF00893 Small Multidrug Resistance protein MKW86_12515 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding MKW86_12515 PF18381 YcaO cyclodehydratase C-terminal domain MKW86_12520 PF01226 Formate/nitrite transporter MKW86_12525 PF02901 Pyruvate formate lyase-like MKW86_12525 PF01228 Glycine radical MKW86_12535 PF00202 Aminotransferase class-III MKW86_12540 PF00266 Aminotransferase class-V MKW86_12545 PF00392 Bacterial regulatory proteins, gntR family MKW86_12545 PF07702 UTRA domain MKW86_12555 PF00005 ABC transporter MKW86_12560 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_12565 PF01266 FAD dependent oxidoreductase MKW86_12570 PF03692 Putative zinc- or iron-chelating domain MKW86_12585 PF00549 CoA-ligase MKW86_12585 PF02629 CoA binding domain MKW86_12590 PF00549 CoA-ligase MKW86_12590 PF08442 ATP-grasp domain MKW86_12595 PF00364 Biotin-requiring enzyme MKW86_12595 PF02817 e3 binding domain MKW86_12595 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MKW86_12600 PF16078 2-oxoglutarate dehydrogenase N-terminus MKW86_12600 PF00676 Dehydrogenase E1 component MKW86_12600 PF16870 2-oxoglutarate dehydrogenase C-terminal MKW86_12600 PF02779 Transketolase, pyrimidine binding domain MKW86_12605 PF13085 2Fe-2S iron-sulfur cluster binding domain MKW86_12610 PF02910 Fumarate reductase flavoprotein C-term MKW86_12610 PF00890 FAD binding domain MKW86_12615 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MKW86_12620 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MKW86_12625 PF00285 Citrate synthase, C-terminal domain MKW86_12640 PF02801 Beta-ketoacyl synthase, C-terminal domain MKW86_12640 PF00109 Beta-ketoacyl synthase, N-terminal domain MKW86_12645 PF05430 S-adenosyl-L-methionine-dependent methyltransferase MKW86_12645 PF01266 FAD dependent oxidoreductase MKW86_12655 PF03606 C4-dicarboxylate anaerobic carrier MKW86_12670 PF01863 Protein of unknown function DUF45 MKW86_12685 PF01197 Ribosomal protein L31 MKW86_12690 PF00444 Ribosomal protein L36 MKW86_12695 PF05726 Pirin C-terminal cupin domain MKW86_12695 PF02678 Pirin MKW86_12700 PF03466 LysR substrate binding domain MKW86_12700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_12705 PF02311 AraC-like ligand binding domain MKW86_12705 PF12833 Helix-turn-helix domain MKW86_12710 PF02653 Branched-chain amino acid transport system / permease component MKW86_12715 PF00005 ABC transporter MKW86_12720 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MKW86_12725 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MKW86_12730 PF00596 Class II Aldolase and Adducin N-terminal domain MKW86_12735 PF11762 L-arabinose isomerase C-terminal domain MKW86_12735 PF02610 L-arabinose isomerase MKW86_12820 PF18766 SWI2/SNF2 ATPase MKW86_12820 PF11867 Domain of unknown function (DUF3387) MKW86_12820 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) MKW86_12835 PF01420 Type I restriction modification DNA specificity domain MKW86_12840 PF12161 HsdM N-terminal domain MKW86_12840 PF02384 N-6 DNA Methylase MKW86_12865 PF01676 Metalloenzyme superfamily MKW86_12870 PF01168 Alanine racemase, N-terminal domain MKW86_12875 PF10797 Protein of unknown function MKW86_12880 PF10941 Protein of unknown function DUF2620 MKW86_12885 PF02126 Phosphotriesterase family MKW86_12895 PF14503 YhfZ C-terminal domain MKW86_12895 PF14502 Helix-turn-helix domain MKW86_12930 PF08411 Exonuclease C-terminal MKW86_12930 PF00929 Exonuclease MKW86_12945 PF03788 LrgA family MKW86_12950 PF04172 LrgB-like family MKW86_12955 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MKW86_12955 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region MKW86_12960 PF00501 AMP-binding enzyme MKW86_12965 PF08891 YfcL protein MKW86_12975 PF03741 Integral membrane protein TerC family MKW86_12980 PF00691 OmpA family MKW86_12985 PF17152 Periplasmic sensor domain MKW86_12985 PF00990 Diguanylate cyclase, GGDEF domain MKW86_12990 PF13689 YfiR/HmsC-like MKW86_12995 PF00158 Sigma-54 interaction domain MKW86_12995 PF18024 Helix-turn-helix domain MKW86_13005 PF01329 Pterin 4 alpha carbinolamine dehydratase MKW86_13010 PF00351 Biopterin-dependent aromatic amino acid hydroxylase MKW86_13015 PF05128 Domain of unknown function (DUF697) MKW86_13020 PF04317 YcjX-like family, DUF463 MKW86_13030 PF06667 Phage shock protein B MKW86_13035 PF04012 PspA/IM30 family MKW86_13040 PF00158 Sigma-54 interaction domain MKW86_13040 PF02954 Bacterial regulatory protein, Fis family MKW86_13045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKW86_13050 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_13055 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_13055 PF12911 N-terminal TM domain of oligopeptide transport permease C MKW86_13060 PF00005 ABC transporter MKW86_13060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKW86_13065 PF00005 ABC transporter MKW86_13070 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) MKW86_13075 PF00156 Phosphoribosyl transferase domain MKW86_13080 PF02674 Colicin V production protein MKW86_13085 PF02403 Seryl-tRNA synthetase N-terminal domain MKW86_13085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MKW86_13090 PF16193 AAA C-terminal domain MKW86_13090 PF12002 MgsA AAA+ ATPase C terminal MKW86_13090 PF00004 ATPase family associated with various cellular activities (AAA) MKW86_13095 PF03548 Outer membrane lipoprotein carrier protein LolA MKW86_13100 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MKW86_13100 PF17854 FtsK alpha domain MKW86_13100 PF09397 Ftsk gamma domain MKW86_13100 PF01580 FtsK/SpoIIIE family MKW86_13105 PF01037 Lrp/AsnC ligand binding domain MKW86_13110 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MKW86_13110 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MKW86_13115 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKW86_13120 PF00990 Diguanylate cyclase, GGDEF domain MKW86_13120 PF17158 Membrane-associated sensor, integral membrane domain MKW86_13125 PF05433 Glycine zipper 2TM domain MKW86_13130 PF03588 Leucyl/phenylalanyl-tRNA protein transferase MKW86_13135 PF04376 Arginine-tRNA-protein transferase, N terminus MKW86_13135 PF04377 Arginine-tRNA-protein transferase, C terminus MKW86_13140 PF01176 Translation initiation factor 1A / IF-1 MKW86_13145 PF00004 ATPase family associated with various cellular activities (AAA) MKW86_13145 PF07724 AAA domain (Cdc48 subfamily) MKW86_13145 PF10431 C-terminal, D2-small domain, of ClpB protein MKW86_13145 PF02861 Clp amino terminal domain, pathogenicity island component MKW86_13145 PF17871 AAA lid domain MKW86_13150 PF02617 ATP-dependent Clp protease adaptor protein ClpS MKW86_13155 PF00313 'Cold-shock' DNA-binding domain MKW86_13160 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MKW86_13160 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MKW86_13195 PF04717 Type VI secretion system, phage-baseplate injector MKW86_13210 PF06761 Intracellular multiplication and human macrophage-killing MKW86_13210 PF14331 ImcF-related N-terminal domain MKW86_13210 PF06744 Type VI secretion protein IcmF C-terminal MKW86_13225 PF00158 Sigma-54 interaction domain MKW86_13225 PF02954 Bacterial regulatory protein, Fis family MKW86_13230 PF07724 AAA domain (Cdc48 subfamily) MKW86_13230 PF00004 ATPase family associated with various cellular activities (AAA) MKW86_13230 PF17871 AAA lid domain MKW86_13230 PF10431 C-terminal, D2-small domain, of ClpB protein MKW86_13240 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE MKW86_13260 PF05947 Type VI secretion system, TssF MKW86_13270 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath MKW86_13300 PF04717 Type VI secretion system, phage-baseplate injector MKW86_13305 PF05638 Type VI secretion system effector, Hcp MKW86_13320 PF10722 Putative bacterial sensory transduction regulator MKW86_13330 PF00265 Thymidine kinase MKW86_13335 PF03553 Na+/H+ antiporter family MKW86_13340 PF00816 H-NS histone family MKW86_13345 PF01923 Cobalamin adenosyltransferase MKW86_13350 PF12843 Putative quorum-sensing-regulated virulence factor MKW86_13355 PF04055 Radical SAM superfamily MKW86_13360 PF06508 Queuosine biosynthesis protein QueC MKW86_13375 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MKW86_13380 PF18073 Rubredoxin metal binding domain MKW86_13390 PF00216 Bacterial DNA-binding protein MKW86_13395 PF00575 S1 RNA binding domain MKW86_13400 PF02224 Cytidylate kinase MKW86_13405 PF00925 GTP cyclohydrolase II MKW86_13410 PF03466 LysR substrate binding domain MKW86_13410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_13415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_13415 PF03466 LysR substrate binding domain MKW86_13420 PF07690 Major Facilitator Superfamily MKW86_13435 PF00881 Nitroreductase family MKW86_13440 PF13188 PAS domain MKW86_13440 PF03707 Bacterial signalling protein N terminal repeat MKW86_13440 PF00990 Diguanylate cyclase, GGDEF domain MKW86_13440 PF00563 EAL domain MKW86_13450 PF03466 LysR substrate binding domain MKW86_13450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_13455 PF00072 Response regulator receiver domain MKW86_13465 PF01212 Beta-eliminating lyase MKW86_13480 PF00248 Aldo/keto reductase family MKW86_13485 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MKW86_13495 PF03411 Penicillin-insensitive murein endopeptidase MKW86_13505 PF04536 TPM domain MKW86_13525 PF01618 MotA/TolQ/ExbB proton channel family MKW86_13530 PF00691 OmpA family MKW86_13530 PF13677 Membrane MotB of proton-channel complex MotA/MotB MKW86_13535 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 MKW86_13540 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MKW86_13545 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MKW86_13545 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MKW86_13555 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MKW86_13555 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MKW86_13560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MKW86_13560 PF00384 Molybdopterin oxidoreductase MKW86_13560 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MKW86_13565 PF00146 NADH dehydrogenase MKW86_13570 PF12838 4Fe-4S dicluster domain MKW86_13575 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 MKW86_13580 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MKW86_13585 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MKW86_13585 PF00361 Proton-conducting membrane transporter MKW86_13590 PF00361 Proton-conducting membrane transporter MKW86_13595 PF00361 Proton-conducting membrane transporter MKW86_13605 PF00072 Response regulator receiver domain MKW86_13610 PF01966 HD domain MKW86_13615 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal MKW86_13615 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MKW86_13615 PF02769 AIR synthase related protein, C-terminal domain MKW86_13620 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKW86_13620 PF01464 Transglycosylase SLT domain MKW86_13625 PF07191 zinc-ribbons MKW86_13630 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MKW86_13630 PF01926 50S ribosome-binding GTPase MKW86_13635 PF13360 PQQ-like domain MKW86_13640 PF09976 Tetratricopeptide repeat-like domain MKW86_13645 PF13393 Histidyl-tRNA synthetase MKW86_13645 PF03129 Anticodon binding domain MKW86_13650 PF04551 GcpE protein MKW86_13655 PF13464 Domain of unknown function (DUF4115) MKW86_13665 PF04055 Radical SAM superfamily MKW86_13670 PF00334 Nucleoside diphosphate kinase MKW86_13675 PF00883 Cytosol aminopeptidase family, catalytic domain MKW86_13675 PF12404 Peptidase MKW86_13680 PF12404 Peptidase MKW86_13680 PF00883 Cytosol aminopeptidase family, catalytic domain MKW86_13685 PF00111 2Fe-2S iron-sulfur cluster binding domain MKW86_13690 PF00012 Hsp70 protein MKW86_13695 PF07743 HSCB C-terminal oligomerisation domain MKW86_13700 PF01521 Iron-sulphur cluster biosynthesis MKW86_13705 PF01592 NifU-like N terminal domain MKW86_13710 PF00266 Aminotransferase class-V MKW86_13715 PF02082 Transcriptional regulator MKW86_13720 PF00588 SpoU rRNA Methylase family MKW86_13730 PF02036 SCP-2 sterol transfer family MKW86_13735 PF01136 Peptidase family U32 MKW86_13740 PF01136 Peptidase family U32 MKW86_13745 PF07719 Tetratricopeptide repeat MKW86_13745 PF13181 Tetratricopeptide repeat MKW86_13755 PF07549 SecD/SecF GG Motif MKW86_13755 PF02355 Protein export membrane protein MKW86_13760 PF13721 SecD export protein N-terminal TM region MKW86_13760 PF07549 SecD/SecF GG Motif MKW86_13760 PF02355 Protein export membrane protein MKW86_13765 PF02699 Preprotein translocase subunit MKW86_13770 PF01702 Queuine tRNA-ribosyltransferase MKW86_13775 PF02547 Queuosine biosynthesis protein MKW86_13780 PF00571 CBS domain MKW86_13785 PF00578 AhpC/TSA family MKW86_13785 PF10417 C-terminal domain of 1-Cys peroxiredoxin MKW86_13790 PF13192 Thioredoxin domain MKW86_13790 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKW86_13795 PF07690 Major Facilitator Superfamily MKW86_13805 PF08241 Methyltransferase domain MKW86_13810 PF03960 ArsC family MKW86_13815 PF01758 Sodium Bile acid symporter family MKW86_13820 PF02374 Anion-transporting ATPase MKW86_13825 PF06953 Arsenical resistance operon trans-acting repressor ArsD MKW86_13845 PF02347 Glycine cleavage system P-protein MKW86_13850 PF01597 Glycine cleavage H-protein MKW86_13855 PF08669 Glycine cleavage T-protein C-terminal barrel domain MKW86_13855 PF01571 Aminomethyltransferase folate-binding domain MKW86_13860 PF01494 FAD binding domain MKW86_13865 PF01494 FAD binding domain MKW86_13870 PF03695 Uncharacterised protein family (UPF0149) MKW86_13875 PF05164 Cell division protein ZapA MKW86_13885 PF07690 Major Facilitator Superfamily MKW86_13890 PF02798 Glutathione S-transferase, N-terminal domain MKW86_13890 PF00043 Glutathione S-transferase, C-terminal domain MKW86_13915 PF00459 Inositol monophosphatase family MKW86_13920 PF00672 HAMP domain MKW86_13920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_13920 PF12729 Four helix bundle sensory module for signal transduction MKW86_13925 PF02535 ZIP Zinc transporter MKW86_13935 PF01048 Phosphorylase superfamily MKW86_13945 PF01497 Periplasmic binding protein MKW86_13950 PF02719 Polysaccharide biosynthesis protein MKW86_13955 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MKW86_13970 PF00202 Aminotransferase class-III MKW86_13980 PF03102 NeuB family MKW86_13980 PF08666 SAF domain MKW86_13990 PF01209 ubiE/COQ5 methyltransferase family MKW86_14005 PF02561 Flagellar protein FliS MKW86_14010 PF07195 Flagellar hook-associated protein 2 C-terminus MKW86_14010 PF07196 Flagellin hook IN motif MKW86_14010 PF02465 Flagellar hook-associated protein 2 N-terminus MKW86_14020 PF00669 Bacterial flagellin N-terminal helical region MKW86_14020 PF00700 Bacterial flagellin C-terminal helical region MKW86_14035 PF00669 Bacterial flagellin N-terminal helical region MKW86_14035 PF00700 Bacterial flagellin C-terminal helical region MKW86_14040 PF07196 Flagellin hook IN motif MKW86_14040 PF00669 Bacterial flagellin N-terminal helical region MKW86_14040 PF00700 Bacterial flagellin C-terminal helical region MKW86_14045 PF03458 UPF0126 domain MKW86_14055 PF02568 Thiamine biosynthesis protein (ThiI) MKW86_14055 PF02926 THUMP domain MKW86_14070 PF10711 Hypothetical protein (DUF2513) MKW86_14085 PF02796 Helix-turn-helix domain of resolvase MKW86_14085 PF00239 Resolvase, N terminal domain MKW86_14095 PF00589 Phage integrase family MKW86_14095 PF02899 Phage integrase, N-terminal SAM-like domain MKW86_14135 PF06832 Penicillin-Binding Protein C-terminus Family MKW86_14135 PF00905 Penicillin binding protein transpeptidase domain MKW86_14135 PF00912 Transglycosylase MKW86_14140 PF00207 Alpha-2-macroglobulin family MKW86_14140 PF07703 Alpha-2-macroglobulin bait region domain MKW86_14140 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain MKW86_14140 PF11974 Bacterial alpha-2-macroglobulin MG3 domain MKW86_14140 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain MKW86_14140 PF17962 Bacterial macroglobulin domain 6 MKW86_14140 PF01835 MG2 domain MKW86_14140 PF07678 A-macroglobulin TED domain MKW86_14140 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain MKW86_14145 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKW86_14145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MKW86_14150 PF03707 Bacterial signalling protein N terminal repeat MKW86_14150 PF00563 EAL domain MKW86_14150 PF00990 Diguanylate cyclase, GGDEF domain MKW86_14155 PF04055 Radical SAM superfamily MKW86_14165 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_14170 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_14175 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKW86_14180 PF00005 ABC transporter MKW86_14185 PF03956 Lysine exporter LysO MKW86_14190 PF01979 Amidohydrolase family MKW86_14195 PF04336 Acyl carrier protein phosphodiesterase MKW86_14210 PF03960 ArsC family MKW86_14215 PF00578 AhpC/TSA family MKW86_14220 PF13181 Tetratricopeptide repeat MKW86_14220 PF01435 Peptidase family M48 MKW86_14225 PF01206 Sulfurtransferase TusA MKW86_14230 PF01594 AI-2E family transporter MKW86_14240 PF00561 alpha/beta hydrolase fold MKW86_14245 PF03976 Polyphosphate kinase 2 (PPK2) MKW86_14250 PF00005 ABC transporter MKW86_14250 PF08402 TOBE domain MKW86_14255 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_14260 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_14260 PF14785 Maltose transport system permease protein MalF P2 domain MKW86_14265 PF01547 Bacterial extracellular solute-binding protein MKW86_14270 PF04245 37-kD nucleoid-associated bacterial protein MKW86_14275 PF07208 Protein of unknown function (DUF1414) MKW86_14280 PF00884 Sulfatase MKW86_14280 PF11893 Domain of unknown function (DUF3413) MKW86_14285 PF07715 TonB-dependent Receptor Plug Domain MKW86_14285 PF00593 TonB dependent receptor MKW86_14290 PF00326 Prolyl oligopeptidase family MKW86_14290 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MKW86_14310 PF03974 Ecotin MKW86_14315 PF04219 Protein of unknown function, DUF MKW86_14320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_14320 PF03466 LysR substrate binding domain MKW86_14325 PF01817 Chorismate mutase type II MKW86_14325 PF02153 Prephenate dehydrogenase MKW86_14330 PF00793 DAHP synthetase I family MKW86_14335 PF03009 Glycerophosphoryl diester phosphodiesterase family MKW86_14340 PF16901 C-terminal domain of alpha-glycerophosphate oxidase MKW86_14340 PF01266 FAD dependent oxidoreductase MKW86_14350 PF00455 DeoR C terminal sensor domain MKW86_14350 PF08220 DeoR-like helix-turn-helix domain MKW86_14355 PF07690 Major Facilitator Superfamily MKW86_14360 PF00230 Major intrinsic protein MKW86_14365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MKW86_14365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MKW86_14370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_14370 PF03466 LysR substrate binding domain MKW86_14390 PF00248 Aldo/keto reductase family MKW86_14395 PF07690 Major Facilitator Superfamily MKW86_14405 PF02322 Cytochrome bd terminal oxidase subunit II MKW86_14410 PF01654 Cytochrome bd terminal oxidase subunit I MKW86_14415 PF00155 Aminotransferase class I and II MKW86_14415 PF00392 Bacterial regulatory proteins, gntR family MKW86_14425 PF04391 Protein of unknown function (DUF533) MKW86_14435 PF03061 Thioesterase superfamily MKW86_14440 PF10689 Protein of unknown function (DUF2496) MKW86_14450 PF07690 Major Facilitator Superfamily MKW86_14455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_14455 PF03466 LysR substrate binding domain MKW86_14465 PF07690 Major Facilitator Superfamily MKW86_14470 PF09101 Exotoxin A binding MKW86_14470 PF09009 Exotoxin A catalytic MKW86_14470 PF09102 Exotoxin A, targeting MKW86_14475 PF00849 RNA pseudouridylate synthase MKW86_14475 PF01479 S4 domain MKW86_14480 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MKW86_14480 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MKW86_14490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MKW86_14500 PF01844 HNH endonuclease MKW86_14505 PF00300 Histidine phosphatase superfamily (branch 1) MKW86_14510 PF13309 HTH domain MKW86_14510 PF08348 YheO-like PAS domain MKW86_14515 PF03313 Serine dehydratase alpha chain MKW86_14520 PF01042 Endoribonuclease L-PSP MKW86_14530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_14530 PF00672 HAMP domain MKW86_14545 PF17810 Arginine decarboxylase helical bundle domain MKW86_14545 PF17944 Arginine decarboxylase C-terminal helical extension MKW86_14545 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MKW86_14555 PF01546 Peptidase family M20/M25/M40 MKW86_14555 PF07687 Peptidase dimerisation domain MKW86_14580 PF04264 YceI-like domain MKW86_14585 PF03466 LysR substrate binding domain MKW86_14585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_14595 PF01268 Formate--tetrahydrofolate ligase MKW86_14600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_14600 PF17200 Single Cache domain 2 MKW86_14600 PF00672 HAMP domain MKW86_14605 PF01227 GTP cyclohydrolase I MKW86_14610 PF00994 Probable molybdopterin binding domain MKW86_14610 PF03454 MoeA C-terminal region (domain IV) MKW86_14610 PF03453 MoeA N-terminal region (domain I and II) MKW86_14615 PF00899 ThiF family MKW86_14620 PF00561 alpha/beta hydrolase fold MKW86_14625 PF00005 ABC transporter MKW86_14625 PF03459 TOBE domain MKW86_14630 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_14640 PF02391 MoaE protein MKW86_14645 PF02597 ThiS family MKW86_14650 PF01967 MoaC family MKW86_14655 PF00994 Probable molybdopterin binding domain MKW86_14660 PF03264 NapC/NirT cytochrome c family, N-terminal region MKW86_14665 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) MKW86_14670 PF13237 4Fe-4S dicluster domain MKW86_14670 PF12801 4Fe-4S binding domain MKW86_14675 PF12800 4Fe-4S binding domain MKW86_14675 PF12838 4Fe-4S dicluster domain MKW86_14680 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MKW86_14680 PF00384 Molybdopterin oxidoreductase MKW86_14680 PF01568 Molydopterin dinucleotide binding domain MKW86_14680 PF10518 TAT (twin-arginine translocation) pathway signal sequence MKW86_14690 PF12800 4Fe-4S binding domain MKW86_14690 PF13187 4Fe-4S dicluster domain MKW86_14690 PF00037 4Fe-4S binding domain MKW86_14695 PF06463 Molybdenum Cofactor Synthesis C MKW86_14695 PF04055 Radical SAM superfamily MKW86_14700 PF00672 HAMP domain MKW86_14700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_14700 PF07730 Histidine kinase MKW86_14700 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term MKW86_14705 PF00196 Bacterial regulatory proteins, luxR family MKW86_14705 PF00072 Response regulator receiver domain MKW86_14715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_14715 PF00512 His Kinase A (phospho-acceptor) domain MKW86_14715 PF09456 RcsC Alpha-Beta-Loop (ABL) MKW86_14715 PF00072 Response regulator receiver domain MKW86_14725 PF01933 Uncharacterised protein family UPF0052 MKW86_14735 PF13230 Glutamine amidotransferases class-II MKW86_14740 PF13580 SIS domain MKW86_14745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MKW86_14745 PF02770 Acyl-CoA dehydrogenase, middle domain MKW86_14745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MKW86_14745 PF09317 Domain of unknown function (DUF1974) MKW86_14750 PF11849 Domain of unknown function (DUF3369) MKW86_14760 PF00929 Exonuclease MKW86_14765 PF00075 RNase H MKW86_14770 PF08241 Methyltransferase domain MKW86_14775 PF00753 Metallo-beta-lactamase superfamily MKW86_14775 PF16123 Hydroxyacylglutathione hydrolase C-terminus MKW86_14785 PF01476 LysM domain MKW86_14785 PF01464 Transglycosylase SLT domain MKW86_14790 PF03372 Endonuclease/Exonuclease/phosphatase family MKW86_14800 PF03061 Thioesterase superfamily MKW86_14810 PF00356 Bacterial regulatory proteins, lacI family MKW86_14815 PF01464 Transglycosylase SLT domain MKW86_14815 PF14718 Soluble lytic murein transglycosylase L domain MKW86_14820 PF03707 Bacterial signalling protein N terminal repeat MKW86_14820 PF00990 Diguanylate cyclase, GGDEF domain MKW86_14820 PF00563 EAL domain MKW86_14825 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MKW86_14845 PF04357 TamB, inner membrane protein subunit of TAM complex MKW86_14850 PF07244 Surface antigen variable number repeat MKW86_14850 PF01103 Surface antigen MKW86_14850 PF17243 POTRA domain TamA domain 1 MKW86_14860 PF05698 Bacterial trigger factor protein (TF) C-terminus MKW86_14865 PF01625 Peptide methionine sulfoxide reductase MKW86_14875 PF02627 Carboxymuconolactone decarboxylase family MKW86_14880 PF00403 Heavy-metal-associated domain MKW86_14880 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKW86_14880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MKW86_14885 PF13416 Bacterial extracellular solute-binding protein MKW86_14895 PF00005 ABC transporter MKW86_14900 PF01066 CDP-alcohol phosphatidyltransferase MKW86_14905 PF13406 Transglycosylase SLT domain MKW86_14920 PF01047 MarR family MKW86_14930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MKW86_14930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MKW86_14930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MKW86_14930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MKW86_14935 PF03925 SeqA protein C-terminal domain MKW86_14935 PF17206 SeqA protein N-terminal domain MKW86_14940 PF12697 Alpha/beta hydrolase family MKW86_14950 PF01402 Ribbon-helix-helix protein, copG family MKW86_14955 PF00258 Flavodoxin MKW86_14965 PF01475 Ferric uptake regulator family MKW86_14970 PF00749 tRNA synthetases class I (E and Q), catalytic domain MKW86_14970 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain MKW86_14975 PF03173 Putative carbohydrate binding domain MKW86_14975 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain MKW86_14975 PF00728 Glycosyl hydrolase family 20, catalytic domain MKW86_14975 PF02838 Glycosyl hydrolase family 20, domain 2 MKW86_14980 PF00367 phosphotransferase system, EIIB MKW86_14980 PF02378 Phosphotransferase system, EIIC MKW86_14980 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MKW86_14985 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MKW86_14990 PF01979 Amidohydrolase family MKW86_14995 PF01047 MarR family MKW86_14995 PF00480 ROK family MKW86_15000 PF08019 Phosphoethanolamine transferase EptA/EptB MKW86_15000 PF00884 Sulfatase MKW86_15005 PF01709 Transcriptional regulator MKW86_15010 PF00152 tRNA synthetases class II (D, K and N) MKW86_15010 PF01336 OB-fold nucleic acid binding domain MKW86_15010 PF02938 GAD domain MKW86_15015 PF01904 Protein of unknown function DUF72 MKW86_15020 PF13649 Methyltransferase domain MKW86_15025 PF08003 Protein of unknown function (DUF1698) MKW86_15045 PF10417 C-terminal domain of 1-Cys peroxiredoxin MKW86_15045 PF00578 AhpC/TSA family MKW86_15050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_15050 PF03466 LysR substrate binding domain MKW86_15055 PF12563 Hemolytic toxin N terminal MKW86_15055 PF07968 Leukocidin/Hemolysin toxin family MKW86_15060 PF00877 NlpC/P60 family MKW86_15070 PF00171 Aldehyde dehydrogenase family MKW86_15075 PF08359 YsiA-like protein, C-terminal region MKW86_15075 PF00440 Bacterial regulatory proteins, tetR family MKW86_15085 PF00465 Iron-containing alcohol dehydrogenase MKW86_15095 PF00291 Pyridoxal-phosphate dependent enzyme MKW86_15115 PF01554 MatE MKW86_15145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MKW86_15145 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MKW86_15145 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MKW86_15145 PF10371 Domain of unknown function MKW86_15145 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase MKW86_15150 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MKW86_15150 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MKW86_15150 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKW86_15155 PF03473 MOSC domain MKW86_15155 PF03476 MOSC N-terminal beta barrel domain MKW86_15155 PF03476 MOSC N-terminal beta barrel domain MKW86_15155 PF00111 2Fe-2S iron-sulfur cluster binding domain MKW86_15155 PF00111 2Fe-2S iron-sulfur cluster binding domain MKW86_15155 PF03473 MOSC domain MKW86_15160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_15160 PF08447 PAS fold MKW86_15160 PF13426 PAS domain MKW86_15165 PF01435 Peptidase family M48 MKW86_15175 PF12697 Alpha/beta hydrolase family MKW86_15175 PF08241 Methyltransferase domain MKW86_15180 PF00155 Aminotransferase class I and II MKW86_15185 PF06968 Biotin and Thiamin Synthesis associated domain MKW86_15185 PF04055 Radical SAM superfamily MKW86_15190 PF00202 Aminotransferase class-III MKW86_15205 PF00152 tRNA synthetases class II (D, K and N) MKW86_15205 PF01336 OB-fold nucleic acid binding domain MKW86_15210 PF03605 Anaerobic c4-dicarboxylate membrane transporter MKW86_15220 PF01546 Peptidase family M20/M25/M40 MKW86_15220 PF07687 Peptidase dimerisation domain MKW86_15225 PF03606 C4-dicarboxylate anaerobic carrier MKW86_15235 PF03466 LysR substrate binding domain MKW86_15235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_15240 PF03960 ArsC family MKW86_15245 PF07687 Peptidase dimerisation domain MKW86_15245 PF01546 Peptidase family M20/M25/M40 MKW86_15250 PF02557 D-alanyl-D-alanine carboxypeptidase MKW86_15260 PF00999 Sodium/hydrogen exchanger family MKW86_15260 PF03471 Transporter associated domain MKW86_15260 PF02080 TrkA-C domain MKW86_15270 PF03471 Transporter associated domain MKW86_15270 PF02080 TrkA-C domain MKW86_15270 PF00999 Sodium/hydrogen exchanger family MKW86_15280 PF01810 LysE type translocator MKW86_15285 PF00672 HAMP domain MKW86_15285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_15290 PF07509 Protein of unknown function (DUF1523) MKW86_15305 PF01156 Inosine-uridine preferring nucleoside hydrolase MKW86_15310 PF00849 RNA pseudouridylate synthase MKW86_15315 PF01048 Phosphorylase superfamily MKW86_15320 PF00465 Iron-containing alcohol dehydrogenase MKW86_15325 PF04355 SmpA / OmlA family MKW86_15330 PF13460 NAD(P)H-binding MKW86_15335 PF03658 RnfH family Ubiquitin MKW86_15340 PF03364 Polyketide cyclase / dehydrase and lipid transport MKW86_15345 PF01668 SmpB protein MKW86_15360 PF00083 Sugar (and other) transporter MKW86_15365 PF17128 Domain of unknown function (DUF5107) MKW86_15365 PF13181 Tetratricopeptide repeat MKW86_15370 PF00480 ROK family MKW86_15375 PF03466 LysR substrate binding domain MKW86_15375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_15380 PF02447 GntP family permease MKW86_15385 PF00291 Pyridoxal-phosphate dependent enzyme MKW86_15395 PF00180 Isocitrate/isopropylmalate dehydrogenase MKW86_15400 PF12833 Helix-turn-helix domain MKW86_15405 PF01238 Phosphomannose isomerase type I MKW86_15435 PF00155 Aminotransferase class I and II MKW86_15440 PF00367 phosphotransferase system, EIIB MKW86_15440 PF02378 Phosphotransferase system, EIIC MKW86_15445 PF00356 Bacterial regulatory proteins, lacI family MKW86_15445 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MKW86_15450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MKW86_15450 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKW86_15455 PF13411 MerR HTH family regulatory protein MKW86_15485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKW86_15485 PF02378 Phosphotransferase system, EIIC MKW86_15485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKW86_15490 PF07690 Major Facilitator Superfamily MKW86_15495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKW86_15495 PF02378 Phosphotransferase system, EIIC MKW86_15495 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKW86_15505 PF00849 RNA pseudouridylate synthase MKW86_15510 PF00293 NUDIX domain MKW86_15520 PF04356 Protein of unknown function (DUF489) MKW86_15525 PF00206 Lyase MKW86_15525 PF08328 Adenylosuccinate lyase C-terminal MKW86_15530 PF08007 Cupin superfamily protein MKW86_15535 PF13508 Acetyltransferase (GNAT) domain MKW86_15545 PF02798 Glutathione S-transferase, N-terminal domain MKW86_15550 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MKW86_15550 PF01243 Pyridoxamine 5'-phosphate oxidase MKW86_15565 PF01189 16S rRNA methyltransferase RsmB/F MKW86_15565 PF01029 NusB family MKW86_15570 PF00462 Glutaredoxin MKW86_15575 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MKW86_15575 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MKW86_15580 PF04333 MlaA lipoprotein MKW86_15585 PF03918 Cytochrome C biogenesis protein MKW86_15590 PF03918 Cytochrome C biogenesis protein MKW86_15595 PF08534 Redoxin MKW86_15600 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal MKW86_15600 PF01578 Cytochrome C assembly protein MKW86_15605 PF03100 CcmE MKW86_15610 PF04995 Heme exporter protein D (CcmD) MKW86_15615 PF01578 Cytochrome C assembly protein MKW86_15620 PF03379 CcmB protein MKW86_15625 PF00005 ABC transporter MKW86_15635 PF01584 CheW-like domain MKW86_15645 PF13614 AAA domain MKW86_15650 PF13677 Membrane MotB of proton-channel complex MotA/MotB MKW86_15650 PF00691 OmpA family MKW86_15655 PF01618 MotA/TolQ/ExbB proton channel family MKW86_15660 PF00072 Response regulator receiver domain MKW86_15660 PF01339 CheB methylesterase MKW86_15665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_15665 PF01627 Hpt domain MKW86_15665 PF00072 Response regulator receiver domain MKW86_15665 PF01584 CheW-like domain MKW86_15665 PF02895 Signal transducing histidine kinase, homodimeric domain MKW86_15670 PF04344 Chemotaxis phosphatase, CheZ MKW86_15675 PF00072 Response regulator receiver domain MKW86_15680 PF04542 Sigma-70 region 2 MKW86_15680 PF04539 Sigma-70 region 3 MKW86_15680 PF04545 Sigma-70, region 4 MKW86_15685 PF10609 NUBPL iron-transfer P-loop NTPase MKW86_15690 PF00448 SRP54-type protein, GTPase domain MKW86_15695 PF00771 FHIPEP family MKW86_15700 PF01312 FlhB HrpN YscU SpaS Family MKW86_15705 PF01311 Bacterial export proteins, family 1 MKW86_15710 PF01313 Bacterial export proteins, family 3 MKW86_15715 PF00813 FliP family MKW86_15720 PF04347 Flagellar biosynthesis protein, FliO MKW86_15725 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MKW86_15730 PF02154 Flagellar motor switch protein FliM MKW86_15730 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MKW86_15750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MKW86_15750 PF18269 T3SS EscN ATPase C-terminal domain MKW86_15760 PF14841 FliG middle domain MKW86_15760 PF14842 FliG N-terminal domain MKW86_15760 PF01706 FliG C-terminal domain MKW86_15765 PF01514 Secretory protein of YscJ/FliF family MKW86_15765 PF08345 Flagellar M-ring protein C-terminal MKW86_15770 PF02049 Flagellar hook-basal body complex protein FliE MKW86_15780 PF00072 Response regulator receiver domain MKW86_15785 PF04055 Radical SAM superfamily MKW86_15785 PF18693 TRAM domain MKW86_15785 PF00919 Uncharacterized protein family UPF0004 MKW86_15795 PF07634 RtxA repeat MKW86_15795 PF11713 Peptidase C80 family MKW86_15795 PF11647 Membrane Localization Domain MKW86_15795 PF16671 Actin cross-linking domain MKW86_15795 PF12146 Serine aminopeptidase, S33 MKW86_15800 PF02794 RTX toxin acyltransferase family MKW86_15810 PF00664 ABC transporter transmembrane region MKW86_15810 PF00005 ABC transporter MKW86_15810 PF03412 Peptidase C39 family MKW86_15820 PF00664 ABC transporter transmembrane region MKW86_15820 PF00005 ABC transporter MKW86_15820 PF03412 Peptidase C39 family MKW86_15825 PF00072 Response regulator receiver domain MKW86_15825 PF00486 Transcriptional regulatory protein, C terminal MKW86_15830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_15835 PF02685 Glucokinase MKW86_15840 PF01418 Helix-turn-helix domain, rpiR family MKW86_15840 PF01380 SIS domain MKW86_15845 PF00224 Pyruvate kinase, barrel domain MKW86_15845 PF02887 Pyruvate kinase, alpha/beta domain MKW86_15855 PF00873 AcrB/AcrD/AcrF family MKW86_15860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MKW86_15860 PF09317 Domain of unknown function (DUF1974) MKW86_15860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MKW86_15860 PF02770 Acyl-CoA dehydrogenase, middle domain MKW86_15865 PF00440 Bacterial regulatory proteins, tetR family MKW86_15885 PF12705 PD-(D/E)XK nuclease superfamily MKW86_15885 PF00580 UvrD/REP helicase N-terminal domain MKW86_15885 PF13361 UvrD-like helicase C-terminal domain MKW86_15895 PF01555 DNA methylase MKW86_15910 PF00176 SNF2 family N-terminal domain MKW86_15910 PF00271 Helicase conserved C-terminal domain MKW86_15915 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A MKW86_15960 PF04002 RadC-like JAB domain MKW86_16010 PF05930 Prophage CP4-57 regulatory protein (AlpA) MKW86_16020 PF05638 Type VI secretion system effector, Hcp MKW86_16030 PF04717 Type VI secretion system, phage-baseplate injector MKW86_16060 PF00384 Molybdopterin oxidoreductase MKW86_16065 PF02634 FdhD/NarQ family MKW86_16070 PF03466 LysR substrate binding domain MKW86_16070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_16090 PF00936 BMC domain MKW86_16095 PF00936 BMC domain MKW86_16100 PF00936 BMC domain MKW86_16105 PF00465 Iron-containing alcohol dehydrogenase MKW86_16105 PF00171 Aldehyde dehydrogenase family MKW86_16115 PF00171 Aldehyde dehydrogenase family MKW86_16115 PF00465 Iron-containing alcohol dehydrogenase MKW86_16120 PF01228 Glycine radical MKW86_16120 PF02901 Pyruvate formate lyase-like MKW86_16125 PF04055 Radical SAM superfamily MKW86_16125 PF13187 4Fe-4S dicluster domain MKW86_16130 PF00936 BMC domain MKW86_16135 PF06130 Phosphate propanoyltransferase MKW86_16145 PF00893 Small Multidrug Resistance protein MKW86_16150 PF00893 Small Multidrug Resistance protein MKW86_16155 PF00672 HAMP domain MKW86_16155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_16155 PF00512 His Kinase A (phospho-acceptor) domain MKW86_16155 PF13426 PAS domain MKW86_16160 PF00486 Transcriptional regulatory protein, C terminal MKW86_16160 PF00072 Response regulator receiver domain MKW86_16165 PF00529 HlyD membrane-fusion protein of T1SS MKW86_16165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKW86_16170 PF00873 AcrB/AcrD/AcrF family MKW86_16190 PF13088 BNR repeat-like domain MKW86_16190 PF09264 Vibrio cholerae sialidase, lectin insertion MKW86_16195 PF04074 YhcH/YjgK/YiaL MKW86_16200 PF00474 Sodium:solute symporter family MKW86_16205 PF00480 ROK family MKW86_16210 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase MKW86_16215 PF01418 Helix-turn-helix domain, rpiR family MKW86_16215 PF01380 SIS domain MKW86_16220 PF00701 Dihydrodipicolinate synthetase family MKW86_16225 PF00141 Peroxidase MKW86_16230 PF08220 DeoR-like helix-turn-helix domain MKW86_16230 PF00455 DeoR C terminal sensor domain MKW86_16235 PF07690 Major Facilitator Superfamily MKW86_16240 PF07882 L-fucose isomerase, second N-terminal domain MKW86_16240 PF02952 L-fucose isomerase, C-terminal domain MKW86_16240 PF07881 L-fucose isomerase, first N-terminal domain MKW86_16245 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MKW86_16245 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MKW86_16255 PF05025 RbsD / FucU transport protein family MKW86_16260 PF00465 Iron-containing alcohol dehydrogenase MKW86_16265 PF00005 ABC transporter MKW86_16265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKW86_16270 PF12911 N-terminal TM domain of oligopeptide transport permease C MKW86_16270 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_16275 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_16280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKW86_16295 PF01476 LysM domain MKW86_16295 PF03734 L,D-transpeptidase catalytic domain MKW86_16295 PF17969 L,D-transpeptidase C-terminal domain MKW86_16305 PF01575 MaoC like domain MKW86_16310 PF05971 RNA methyltransferase MKW86_16315 PF00877 NlpC/P60 family MKW86_16320 PF01648 4'-phosphopantetheinyl transferase superfamily MKW86_16325 PF00085 Thioredoxin MKW86_16335 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MKW86_16340 PF00551 Formyl transferase MKW86_16340 PF01842 ACT domain MKW86_16350 PF13091 PLD-like domain MKW86_16350 PF13396 Phospholipase_D-nuclease N-terminal MKW86_16365 PF01551 Peptidase family M23 MKW86_16370 PF00128 Alpha amylase, catalytic domain MKW86_16375 PF01464 Transglycosylase SLT domain MKW86_16375 PF10145 Phage-related minor tail protein MKW86_16375 PF01551 Peptidase family M23 MKW86_16380 PF00230 Major intrinsic protein MKW86_16385 PF02075 Crossover junction endodeoxyribonuclease RuvC MKW86_16390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MKW86_16415 PF08497 Radical SAM N-terminal MKW86_16415 PF04055 Radical SAM superfamily MKW86_16415 PF11842 Domain of unknown function (DUF3362) MKW86_16425 PF00873 AcrB/AcrD/AcrF family MKW86_16430 PF00529 HlyD membrane-fusion protein of T1SS MKW86_16430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKW86_16435 PF00990 Diguanylate cyclase, GGDEF domain MKW86_16440 PF01734 Patatin-like phospholipase MKW86_16445 PF00209 Sodium:neurotransmitter symporter family MKW86_16460 PF00691 OmpA family MKW86_16460 PF01389 OmpA-like transmembrane domain MKW86_16465 PF00691 OmpA family MKW86_16465 PF01389 OmpA-like transmembrane domain MKW86_16470 PF00691 OmpA family MKW86_16470 PF01389 OmpA-like transmembrane domain MKW86_16475 PF03949 Malic enzyme, NAD binding domain MKW86_16475 PF00390 Malic enzyme, N-terminal domain MKW86_16480 PF12833 Helix-turn-helix domain MKW86_16485 PF01554 MatE MKW86_16490 PF10692 Protein of unknown function (DUF2498) MKW86_16495 PF00990 Diguanylate cyclase, GGDEF domain MKW86_16495 PF00072 Response regulator receiver domain MKW86_16500 PF00860 Permease family MKW86_16510 PF01235 Sodium:alanine symporter family MKW86_16515 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MKW86_16515 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MKW86_16520 PF01699 Sodium/calcium exchanger protein MKW86_16525 PF08534 Redoxin MKW86_16535 PF00293 NUDIX domain MKW86_16555 PF00005 ABC transporter MKW86_16560 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MKW86_16560 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MKW86_16570 PF03932 CutC family MKW86_16575 PF00480 ROK family MKW86_16585 PF01435 Peptidase family M48 MKW86_16590 PF12849 PBP superfamily domain MKW86_16595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_16595 PF00512 His Kinase A (phospho-acceptor) domain MKW86_16595 PF00989 PAS fold MKW86_16595 PF11808 Phosphate regulon sensor protein PhoR MKW86_16600 PF00072 Response regulator receiver domain MKW86_16600 PF00486 Transcriptional regulatory protein, C terminal MKW86_16605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MKW86_16610 PF02515 CoA-transferase family III MKW86_16615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MKW86_16615 PF02770 Acyl-CoA dehydrogenase, middle domain MKW86_16615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MKW86_16620 PF00158 Sigma-54 interaction domain MKW86_16620 PF01590 GAF domain MKW86_16620 PF02954 Bacterial regulatory protein, Fis family MKW86_16625 PF00171 Aldehyde dehydrogenase family MKW86_16635 PF00892 EamA-like transporter family MKW86_16640 PF12431 Transcriptional regulator MKW86_16640 PF00072 Response regulator receiver domain MKW86_16645 PF00989 PAS fold MKW86_16645 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain MKW86_16645 PF17203 Single cache domain 3 MKW86_16645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_16650 PF00390 Malic enzyme, N-terminal domain MKW86_16650 PF03949 Malic enzyme, NAD binding domain MKW86_16655 PF03390 2-hydroxycarboxylate transporter family MKW86_16665 PF01047 MarR family MKW86_16670 PF00529 HlyD membrane-fusion protein of T1SS MKW86_16670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKW86_16695 PF01679 Proteolipid membrane potential modulator MKW86_16705 PF13597 Anaerobic ribonucleoside-triphosphate reductase MKW86_16705 PF03477 ATP cone domain MKW86_16715 PF00533 BRCA1 C Terminus (BRCT) domain MKW86_16715 PF03120 NAD-dependent DNA ligase OB-fold domain MKW86_16715 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MKW86_16715 PF12826 Helix-hairpin-helix motif MKW86_16715 PF01653 NAD-dependent DNA ligase adenylation domain MKW86_16720 PF04354 ZipA, C-terminal FtsZ-binding domain MKW86_16725 PF06470 SMC proteins Flexible Hinge Domain MKW86_16725 PF02463 RecF/RecN/SMC N terminal domain MKW86_16735 PF03458 UPF0126 domain MKW86_16745 PF05951 Bacterial protein of unknown function (DUF882) MKW86_16750 PF01471 Putative peptidoglycan binding domain MKW86_16750 PF03734 L,D-transpeptidase catalytic domain MKW86_16765 PF00535 Glycosyl transferase family 2 MKW86_16780 PF00128 Alpha amylase, catalytic domain MKW86_16790 PF00072 Response regulator receiver domain MKW86_16790 PF00196 Bacterial regulatory proteins, luxR family MKW86_16810 PF02254 TrkA-N domain MKW86_16810 PF00999 Sodium/hydrogen exchanger family MKW86_16810 PF02080 TrkA-C domain MKW86_16815 PF00990 Diguanylate cyclase, GGDEF domain MKW86_16820 PF11734 TilS substrate C-terminal domain MKW86_16820 PF09179 TilS substrate binding domain MKW86_16820 PF01171 PP-loop family MKW86_16825 PF05649 Peptidase family M13 MKW86_16825 PF01431 Peptidase family M13 MKW86_16835 PF16326 ABC transporter C-terminal domain MKW86_16835 PF12848 ABC transporter MKW86_16835 PF00005 ABC transporter MKW86_16840 PF13302 Acetyltransferase (GNAT) domain MKW86_16845 PF13520 Amino acid permease MKW86_16850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_16850 PF03466 LysR substrate binding domain MKW86_16855 PF12146 Serine aminopeptidase, S33 MKW86_16860 PF12146 Serine aminopeptidase, S33 MKW86_16865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_16865 PF03466 LysR substrate binding domain MKW86_16870 PF12706 Beta-lactamase superfamily domain MKW86_16885 PF03466 LysR substrate binding domain MKW86_16885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_16895 PF08543 Phosphomethylpyrimidine kinase MKW86_16900 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain MKW86_16900 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain MKW86_16900 PF01276 Orn/Lys/Arg decarboxylase, major domain MKW86_16905 PF13520 Amino acid permease MKW86_16910 PF18500 CadC C-terminal domain 1 MKW86_16910 PF00486 Transcriptional regulatory protein, C terminal MKW86_16915 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MKW86_16920 PF07733 Bacterial DNA polymerase III alpha NTPase domain MKW86_16920 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MKW86_16920 PF14579 Helix-hairpin-helix motif MKW86_16920 PF02811 PHP domain MKW86_16920 PF01336 OB-fold nucleic acid binding domain MKW86_16925 PF01351 Ribonuclease HII MKW86_16930 PF02684 Lipid-A-disaccharide synthetase MKW86_16935 PF00132 Bacterial transferase hexapeptide (six repeats) MKW86_16935 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MKW86_16940 PF07977 FabA-like domain MKW86_16945 PF00132 Bacterial transferase hexapeptide (six repeats) MKW86_16945 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD MKW86_16950 PF03938 Outer membrane protein (OmpH-like) MKW86_16955 PF07244 Surface antigen variable number repeat MKW86_16955 PF01103 Surface antigen MKW86_16960 PF02163 Peptidase family M50 MKW86_16960 PF17820 PDZ domain MKW86_16965 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase MKW86_16965 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MKW86_16965 PF13288 DXP reductoisomerase C-terminal domain MKW86_16975 PF01255 Putative undecaprenyl diphosphate synthase MKW86_16980 PF01765 Ribosome recycling factor MKW86_16985 PF00696 Amino acid kinase family MKW86_16990 PF00889 Elongation factor TS MKW86_16995 PF00318 Ribosomal protein S2 MKW86_17000 PF00557 Metallopeptidase family M24 MKW86_17005 PF01842 ACT domain MKW86_17005 PF08335 GlnD PII-uridylyltransferase MKW86_17005 PF01966 HD domain MKW86_17005 PF01909 Nucleotidyltransferase domain MKW86_17010 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal MKW86_17010 PF14602 Hexapeptide repeat of succinyl-transferase MKW86_17010 PF00132 Bacterial transferase hexapeptide (six repeats) MKW86_17015 PF11944 Protein of unknown function (DUF3461) MKW86_17020 PF00367 phosphotransferase system, EIIB MKW86_17020 PF02378 Phosphotransferase system, EIIC MKW86_17025 PF07148 Maltose operon periplasmic protein precursor (MalM) MKW86_17030 PF02264 LamB porin MKW86_17035 PF00258 Flavodoxin MKW86_17040 PF00849 RNA pseudouridylate synthase MKW86_17045 PF04287 tRNA pseudouridine synthase C MKW86_17070 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) MKW86_17075 PF07348 Syd protein (SUKH-2) MKW86_17080 PF14489 QueF-like protein MKW86_17080 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term MKW86_17090 PF00990 Diguanylate cyclase, GGDEF domain MKW86_17095 PF11892 Domain of unknown function (DUF3412) MKW86_17095 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases MKW86_17095 PF03641 Possible lysine decarboxylase MKW86_17100 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MKW86_17100 PF01367 5'-3' exonuclease, C-terminal SAM fold MKW86_17105 PF00180 Isocitrate/isopropylmalate dehydrogenase MKW86_17105 PF18324 Hypothetical protein TT1725 MKW86_17115 PF01728 FtsJ-like methyltransferase MKW86_17115 PF18125 RlmM ferredoxin-like domain MKW86_17120 PF04241 Protein of unknown function (DUF423) MKW86_17130 PF03466 LysR substrate binding domain MKW86_17130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_17135 PF00672 HAMP domain MKW86_17135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_17140 PF00817 impB/mucB/samB family MKW86_17140 PF11799 impB/mucB/samB family C-terminal domain MKW86_17140 PF11798 IMS family HHH motif MKW86_17155 PF02424 ApbE family MKW86_17160 PF00970 Oxidoreductase FAD-binding domain MKW86_17160 PF00175 Oxidoreductase NAD-binding domain MKW86_17160 PF00111 2Fe-2S iron-sulfur cluster binding domain MKW86_17165 PF02508 Rnf-Nqr subunit, membrane protein MKW86_17170 PF02508 Rnf-Nqr subunit, membrane protein MKW86_17175 PF04205 FMN-binding domain MKW86_17180 PF03116 NQR2, RnfD, RnfE family MKW86_17185 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) MKW86_17185 PF11973 NQRA C-terminal domain MKW86_17190 PF01722 BolA-like protein MKW86_17195 PF05175 Methyltransferase small domain MKW86_17205 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MKW86_17215 PF07690 Major Facilitator Superfamily MKW86_17220 PF03502 Nucleoside-specific channel-forming protein, Tsx MKW86_17225 PF04461 Protein of unknown function (DUF520) MKW86_17230 PF02558 Ketopantoate reductase PanE/ApbA MKW86_17230 PF08546 Ketopantoate reductase PanE/ApbA C terminal MKW86_17235 PF01965 DJ-1/PfpI family MKW86_17240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MKW86_17240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MKW86_17240 PF00205 Thiamine pyrophosphate enzyme, central domain MKW86_17245 PF03306 Alpha-acetolactate decarboxylase MKW86_17250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_17250 PF03466 LysR substrate binding domain MKW86_17275 PF03496 ADP-ribosyltransferase exoenzyme MKW86_17275 PF03534 Salmonella virulence plasmid 65kDa B protein MKW86_17290 PF05638 Type VI secretion system effector, Hcp MKW86_17295 PF03472 Autoinducer binding domain MKW86_17295 PF00196 Bacterial regulatory proteins, luxR family MKW86_17305 PF06965 Na+/H+ antiporter 1 MKW86_17305 PF13462 Thioredoxin MKW86_17310 PF16363 GDP-mannose 4,6 dehydratase MKW86_17315 PF00042 Globin MKW86_17315 PF00175 Oxidoreductase NAD-binding domain MKW86_17315 PF00970 Oxidoreductase FAD-binding domain MKW86_17320 PF03063 Prismane/CO dehydrogenase family MKW86_17325 PF00210 Ferritin-like domain MKW86_17365 PF00106 short chain dehydrogenase MKW86_17375 PF00875 DNA photolyase MKW86_17375 PF03441 FAD binding domain of DNA photolyase MKW86_17380 PF13411 MerR HTH family regulatory protein MKW86_17385 PF08349 Protein of unknown function (DUF1722) MKW86_17415 PF01817 Chorismate mutase type II MKW86_17415 PF00800 Prephenate dehydratase MKW86_17445 PF09588 YqaJ-like viral recombinase domain MKW86_17490 PF04002 RadC-like JAB domain MKW86_17500 PF04055 Radical SAM superfamily MKW86_17505 PF06508 Queuosine biosynthesis protein QueC MKW86_17530 PF01242 6-pyruvoyl tetrahydropterin synthase MKW86_17545 PF00270 DEAD/DEAH box helicase MKW86_17545 PF00271 Helicase conserved C-terminal domain MKW86_17545 PF00570 HRDC domain MKW86_17545 PF16124 RecQ zinc-binding MKW86_17545 PF09382 RQC domain MKW86_17565 PF00570 HRDC domain MKW86_17565 PF00271 Helicase conserved C-terminal domain MKW86_17565 PF00270 DEAD/DEAH box helicase MKW86_17565 PF16124 RecQ zinc-binding MKW86_17565 PF09382 RQC domain MKW86_17570 PF18339 RapA N-terminal Tudor like domain 1 MKW86_17570 PF12137 RNA polymerase recycling family C-terminal MKW86_17570 PF18337 RapA N-terminal Tudor like domain MKW86_17570 PF00176 SNF2 family N-terminal domain MKW86_17570 PF00271 Helicase conserved C-terminal domain MKW86_17575 PF00717 Peptidase S24-like MKW86_17595 PF07715 TonB-dependent Receptor Plug Domain MKW86_17595 PF00593 TonB dependent receptor MKW86_17615 PF00005 ABC transporter MKW86_17620 PF01590 GAF domain MKW86_17620 PF00158 Sigma-54 interaction domain MKW86_17640 PF01032 FecCD transport family MKW86_17645 PF00005 ABC transporter MKW86_17655 PF13649 Methyltransferase domain MKW86_17670 PF01548 Transposase MKW86_17670 PF02371 Transposase IS116/IS110/IS902 family MKW86_17710 PF00486 Transcriptional regulatory protein, C terminal MKW86_17710 PF18500 CadC C-terminal domain 1 MKW86_17720 PF00563 EAL domain MKW86_17720 PF00990 Diguanylate cyclase, GGDEF domain MKW86_17720 PF08447 PAS fold MKW86_17720 PF08448 PAS fold MKW86_17740 PF09134 Invasin, domain 3 MKW86_17740 PF02369 Bacterial Ig-like domain (group 1) MKW86_17740 PF11924 Inverse autotransporter, beta-domain MKW86_17745 PF13086 AAA domain MKW86_17745 PF13087 AAA domain MKW86_17745 PF13195 Protein of unknown function (DUF4011) MKW86_17755 PF00455 DeoR C terminal sensor domain MKW86_17755 PF08220 DeoR-like helix-turn-helix domain MKW86_17760 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MKW86_17760 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MKW86_17765 PF07005 Sugar-binding N-terminal domain MKW86_17765 PF17042 Nucleotide-binding C-terminal domain MKW86_17770 PF00596 Class II Aldolase and Adducin N-terminal domain MKW86_17775 PF01261 Xylose isomerase-like TIM barrel MKW86_17780 PF01370 NAD dependent epimerase/dehydratase family MKW86_17785 PF02447 GntP family permease MKW86_17795 PF02743 Cache domain MKW86_17795 PF00672 HAMP domain MKW86_17795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_17800 PF03573 outer membrane porin, OprD family MKW86_17805 PF00106 short chain dehydrogenase MKW86_17830 PF02074 Carboxypeptidase Taq (M32) metallopeptidase MKW86_17840 PF02805 Metal binding domain of Ada MKW86_17840 PF06029 AlkA N-terminal domain MKW86_17840 PF00730 HhH-GPD superfamily base excision DNA repair protein MKW86_17840 PF12833 Helix-turn-helix domain MKW86_17845 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MKW86_17845 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MKW86_17855 PF01136 Peptidase family U32 MKW86_17855 PF12392 Collagenase MKW86_17860 PF01810 LysE type translocator MKW86_17865 PF03466 LysR substrate binding domain MKW86_17865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_17870 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MKW86_17870 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MKW86_17875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_17875 PF00672 HAMP domain MKW86_17875 PF02743 Cache domain MKW86_17880 PF00072 Response regulator receiver domain MKW86_17890 PF01627 Hpt domain MKW86_17890 PF07194 P2 response regulator binding domain MKW86_17890 PF02895 Signal transducing histidine kinase, homodimeric domain MKW86_17890 PF01584 CheW-like domain MKW86_17890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_17895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_17895 PF00672 HAMP domain MKW86_17895 PF12729 Four helix bundle sensory module for signal transduction MKW86_17900 PF01584 CheW-like domain MKW86_17905 PF00672 HAMP domain MKW86_17905 PF02203 Tar ligand binding domain homologue MKW86_17905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_17910 PF01739 CheR methyltransferase, SAM binding domain MKW86_17910 PF03705 CheR methyltransferase, all-alpha domain MKW86_17915 PF03975 CheD chemotactic sensory transduction MKW86_17920 PF01339 CheB methylesterase MKW86_17920 PF00072 Response regulator receiver domain MKW86_17925 PF00266 Aminotransferase class-V MKW86_17950 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MKW86_17950 PF00672 HAMP domain MKW86_17950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_17950 PF00512 His Kinase A (phospho-acceptor) domain MKW86_17950 PF01627 Hpt domain MKW86_17950 PF00072 Response regulator receiver domain MKW86_17955 PF00072 Response regulator receiver domain MKW86_17955 PF00196 Bacterial regulatory proteins, luxR family MKW86_17965 PF16967 E-set like domain MKW86_17965 PF15976 CS1-pili formation C-terminal MKW86_17980 PF00563 EAL domain MKW86_17980 PF01590 GAF domain MKW86_17980 PF00990 Diguanylate cyclase, GGDEF domain MKW86_17980 PF00989 PAS fold MKW86_17985 PF01136 Peptidase family U32 MKW86_17985 PF16325 Peptidase family U32 C-terminal domain MKW86_17990 PF12838 4Fe-4S dicluster domain MKW86_18000 PF01168 Alanine racemase, N-terminal domain MKW86_18000 PF00842 Alanine racemase, C-terminal domain MKW86_18005 PF00772 DnaB-like helicase N terminal domain MKW86_18005 PF03796 DnaB-like helicase C terminal domain MKW86_18015 PF12792 CSS motif domain associated with EAL MKW86_18015 PF00563 EAL domain MKW86_18020 PF00149 Calcineurin-like phosphoesterase MKW86_18020 PF02872 5'-nucleotidase, C-terminal domain MKW86_18040 PF00072 Response regulator receiver domain MKW86_18040 PF00158 Sigma-54 interaction domain MKW86_18040 PF02954 Bacterial regulatory protein, Fis family MKW86_18045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MKW86_18045 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MKW86_18055 PF04102 SlyX MKW86_18060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MKW86_18065 PF09526 Probable metal-binding protein (DUF2387) MKW86_18075 PF01584 CheW-like domain MKW86_18075 PF00072 Response regulator receiver domain MKW86_18080 PF00561 alpha/beta hydrolase fold MKW86_18085 PF01590 GAF domain MKW86_18085 PF00360 Phytochrome region MKW86_18085 PF00990 Diguanylate cyclase, GGDEF domain MKW86_18085 PF00563 EAL domain MKW86_18090 PF06794 Uncharacterised protein family (UPF0270) MKW86_18095 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MKW86_18095 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MKW86_18095 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MKW86_18100 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MKW86_18105 PF00535 Glycosyl transferase family 2 MKW86_18110 PF01370 NAD dependent epimerase/dehydratase family MKW86_18110 PF02911 Formyl transferase, C-terminal domain MKW86_18110 PF00551 Formyl transferase MKW86_18115 PF01522 Polysaccharide deacetylase MKW86_18120 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase MKW86_18125 PF00892 EamA-like transporter family MKW86_18130 PF00893 Small Multidrug Resistance protein MKW86_18135 PF00485 Phosphoribulokinase / Uridine kinase family MKW86_18150 PF02566 OsmC-like protein MKW86_18155 PF13545 Crp-like helix-turn-helix domain MKW86_18155 PF00027 Cyclic nucleotide-binding domain MKW86_18160 PF13847 Methyltransferase domain MKW86_18165 PF18416 N-acetylglucosamine binding protein domain 2 MKW86_18165 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading MKW86_18170 PF17945 Beta/Gamma crystallin MKW86_18170 PF12561 ToxR activated gene A lipoprotein domain MKW86_18175 PF08329 Chitinase A, N-terminal domain MKW86_18175 PF00704 Glycosyl hydrolases family 18 MKW86_18180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_18180 PF00512 His Kinase A (phospho-acceptor) domain MKW86_18180 PF00989 PAS fold MKW86_18190 PF13443 Cro/C1-type HTH DNA-binding domain MKW86_18195 PF12832 MFS_1 like family MKW86_18200 PF07715 TonB-dependent Receptor Plug Domain MKW86_18200 PF00593 TonB dependent receptor MKW86_18220 PF01243 Pyridoxamine 5'-phosphate oxidase MKW86_18225 PF06228 Haem utilisation ChuX/HutX MKW86_18235 PF01032 FecCD transport family MKW86_18240 PF00005 ABC transporter MKW86_18250 PF01370 NAD dependent epimerase/dehydratase family MKW86_18260 PF01791 DeoC/LacD family aldolase MKW86_18265 PF01773 Na+ dependent nucleoside transporter N-terminus MKW86_18265 PF07662 Na+ dependent nucleoside transporter C-terminus MKW86_18265 PF07670 Nucleoside recognition MKW86_18270 PF01048 Phosphorylase superfamily MKW86_18275 PF03466 LysR substrate binding domain MKW86_18275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_18290 PF01464 Transglycosylase SLT domain MKW86_18295 PF01048 Phosphorylase superfamily MKW86_18310 PF00005 ABC transporter MKW86_18310 PF12848 ABC transporter MKW86_18320 PF00860 Permease family MKW86_18325 PF05099 Tellurite resistance protein TerB MKW86_18325 PF00226 DnaJ domain MKW86_18330 PF00483 Nucleotidyl transferase MKW86_18335 PF01636 Phosphotransferase enzyme family MKW86_18340 PF03968 OstA-like protein MKW86_18340 PF04453 LPS transport system D MKW86_18345 PF00639 PPIC-type PPIASE domain MKW86_18345 PF09312 SurA N-terminal domain MKW86_18350 PF04166 Pyridoxal phosphate biosynthetic protein PdxA MKW86_18355 PF00398 Ribosomal RNA adenine dimethylase MKW86_18360 PF04379 ApaG domain MKW86_18365 PF00149 Calcineurin-like phosphoesterase MKW86_18375 PF00296 Luciferase-like monooxygenase MKW86_18395 PF13193 AMP-binding enzyme C-terminal domain MKW86_18395 PF00501 AMP-binding enzyme MKW86_18400 PF07670 Nucleoside recognition MKW86_18405 PF01926 50S ribosome-binding GTPase MKW86_18405 PF01018 GTP1/OBG MKW86_18410 PF01016 Ribosomal L27 protein MKW86_18415 PF00829 Ribosomal prokaryotic L21 protein MKW86_18420 PF00348 Polyprenyl synthetase MKW86_18425 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) MKW86_18430 PF01145 SPFH domain / Band 7 family MKW86_18435 PF01145 SPFH domain / Band 7 family MKW86_18435 PF12221 Bacterial membrane protein N terminal MKW86_18440 PF16360 GTP-binding GTPase Middle Region MKW86_18440 PF13167 GTP-binding GTPase N-terminal MKW86_18440 PF01926 50S ribosome-binding GTPase MKW86_18445 PF17209 Hfq protein MKW86_18455 PF01119 DNA mismatch repair protein, C-terminal domain MKW86_18455 PF08676 MutL C terminal dimerisation domain MKW86_18465 PF01520 N-acetylmuramoyl-L-alanine amidase MKW86_18470 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MKW86_18475 PF01256 Carbohydrate kinase MKW86_18475 PF03853 YjeF-related protein N-terminus MKW86_18480 PF08331 Domain of unknown function (DUF1730) MKW86_18485 PF00480 ROK family MKW86_18500 PF09383 NIL domain MKW86_18500 PF00005 ABC transporter MKW86_18505 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_18510 PF03180 NLPA lipoprotein MKW86_18515 PF02357 Transcription termination factor nusG MKW86_18520 PF12729 Four helix bundle sensory module for signal transduction MKW86_18520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_18520 PF00672 HAMP domain MKW86_18525 PF03707 Bacterial signalling protein N terminal repeat MKW86_18525 PF00990 Diguanylate cyclase, GGDEF domain MKW86_18525 PF00563 EAL domain MKW86_18530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_18530 PF09456 RcsC Alpha-Beta-Loop (ABL) MKW86_18530 PF00512 His Kinase A (phospho-acceptor) domain MKW86_18530 PF00072 Response regulator receiver domain MKW86_18540 PF01966 HD domain MKW86_18540 PF13286 Phosphohydrolase-associated domain MKW86_18545 PF00989 PAS fold MKW86_18545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_18545 PF18415 Histidine kinase receptor ArcB trans-membrane domain MKW86_18545 PF00512 His Kinase A (phospho-acceptor) domain MKW86_18545 PF01627 Hpt domain MKW86_18545 PF00072 Response regulator receiver domain MKW86_18565 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) MKW86_18570 PF03466 LysR substrate binding domain MKW86_18570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_18580 PF01259 SAICAR synthetase MKW86_18585 PF06804 NlpB/DapX lipoprotein MKW86_18590 PF00701 Dihydrodipicolinate synthetase family MKW86_18595 PF01842 ACT domain MKW86_18600 PF00578 AhpC/TSA family MKW86_18605 PF03887 YfbU domain MKW86_18610 PF04217 Protein of unknown function, DUF412 MKW86_18615 PF00871 Acetokinase family MKW86_18620 PF01515 Phosphate acetyl/butaryl transferase MKW86_18620 PF07085 DRTGG domain MKW86_18625 PF10369 Small subunit of acetolactate synthase MKW86_18630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MKW86_18630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MKW86_18630 PF00205 Thiamine pyrophosphate enzyme, central domain MKW86_18645 PF01569 PAP2 superfamily MKW86_18655 PF08502 LeuA allosteric (dimerisation) domain MKW86_18655 PF00682 HMGL-like MKW86_18660 PF00180 Isocitrate/isopropylmalate dehydrogenase MKW86_18665 PF00330 Aconitase family (aconitate hydratase) MKW86_18670 PF00694 Aconitase C-terminal domain MKW86_18690 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_18695 PF00005 ABC transporter MKW86_18705 PF02562 PhoH-like protein MKW86_18705 PF13638 PIN domain MKW86_18715 PF02867 Ribonucleotide reductase, barrel domain MKW86_18715 PF00317 Ribonucleotide reductase, all-alpha domain MKW86_18715 PF08343 Ribonucleotide reductase N-terminal MKW86_18745 PF00271 Helicase conserved C-terminal domain MKW86_18745 PF00176 SNF2 family N-terminal domain MKW86_18745 PF18339 RapA N-terminal Tudor like domain 1 MKW86_18745 PF18337 RapA N-terminal Tudor like domain MKW86_18745 PF12137 RNA polymerase recycling family C-terminal MKW86_18750 PF00849 RNA pseudouridylate synthase MKW86_18760 PF00990 Diguanylate cyclase, GGDEF domain MKW86_18760 PF03707 Bacterial signalling protein N terminal repeat MKW86_18760 PF13188 PAS domain MKW86_18760 PF00563 EAL domain MKW86_18770 PF00118 TCP-1/cpn60 chaperonin family MKW86_18775 PF00166 Chaperonin 10 Kd subunit MKW86_18780 PF01554 MatE MKW86_18785 PF04186 FxsA cytoplasmic membrane protein MKW86_18790 PF10415 Fumarase C C-terminus MKW86_18790 PF00206 Lyase MKW86_18795 PF03605 Anaerobic c4-dicarboxylate membrane transporter MKW86_18800 PF00267 Gram-negative porin MKW86_18805 PF07690 Major Facilitator Superfamily MKW86_18810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_18810 PF03466 LysR substrate binding domain MKW86_18815 PF07504 Fungalysin/Thermolysin Propeptide Motif MKW86_18815 PF03413 Peptidase propeptide and YPEB domain MKW86_18815 PF01447 Thermolysin metallopeptidase, catalytic domain MKW86_18815 PF04151 Bacterial pre-peptidase C-terminal domain MKW86_18815 PF02868 Thermolysin metallopeptidase, alpha-helical domain MKW86_18820 PF13302 Acetyltransferase (GNAT) domain MKW86_18825 PF13302 Acetyltransferase (GNAT) domain MKW86_18835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MKW86_18835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MKW86_18840 PF07690 Major Facilitator Superfamily MKW86_18845 PF01725 Ham1 family MKW86_18850 PF04055 Radical SAM superfamily MKW86_18850 PF06969 HemN C-terminal domain MKW86_18855 PF03889 Alternative ribosome-rescue factor A MKW86_18860 PF01872 RibD C-terminal domain MKW86_18865 PF13411 MerR HTH family regulatory protein MKW86_18870 PF01808 AICARFT/IMPCHase bienzyme MKW86_18870 PF02142 MGS-like domain MKW86_18875 PF02844 Phosphoribosylglycinamide synthetase, N domain MKW86_18875 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MKW86_18875 PF02843 Phosphoribosylglycinamide synthetase, C domain MKW86_18890 PF00128 Alpha amylase, catalytic domain MKW86_18900 PF04546 Sigma-70, non-essential region MKW86_18900 PF03979 Sigma-70 factor, region 1.1 MKW86_18900 PF00140 Sigma-70 factor, region 1.2 MKW86_18900 PF04542 Sigma-70 region 2 MKW86_18900 PF04539 Sigma-70 region 3 MKW86_18900 PF04545 Sigma-70, region 4 MKW86_18905 PF10410 DnaB-helicase binding domain of primase MKW86_18905 PF08275 DNA primase catalytic core, N-terminal domain MKW86_18905 PF01807 CHC2 zinc finger MKW86_18905 PF08278 DNA primase DnaG DnaB-binding MKW86_18910 PF09424 Yqey-like protein MKW86_18915 PF01165 Ribosomal protein S21 MKW86_18920 PF00814 Glycoprotease family MKW86_18925 PF00140 Sigma-70 factor, region 1.2 MKW86_18925 PF04542 Sigma-70 region 2 MKW86_18925 PF04539 Sigma-70 region 3 MKW86_18925 PF04545 Sigma-70, region 4 MKW86_18930 PF01476 LysM domain MKW86_18930 PF01551 Peptidase family M23 MKW86_18935 PF09335 SNARE associated Golgi protein MKW86_18945 PF01975 Survival protein SurE MKW86_18950 PF01142 tRNA pseudouridine synthase D (TruD) MKW86_18955 PF02542 YgbB family MKW86_18960 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MKW86_18965 PF04977 Septum formation initiator MKW86_18970 PF00113 Enolase, C-terminal TIM barrel domain MKW86_18970 PF03952 Enolase, N-terminal domain MKW86_18975 PF06418 CTP synthase N-terminus MKW86_18975 PF00117 Glutamine amidotransferase class-I MKW86_18980 PF03819 MazG nucleotide pyrophosphohydrolase domain MKW86_18985 PF02824 TGS domain MKW86_18985 PF04607 Region found in RelA / SpoT proteins MKW86_18985 PF13291 ACT domain MKW86_18990 PF05958 tRNA (Uracil-5-)-methyltransferase MKW86_18990 PF01938 TRAM domain MKW86_18995 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MKW86_18995 PF00072 Response regulator receiver domain MKW86_18995 PF01627 Hpt domain MKW86_18995 PF00512 His Kinase A (phospho-acceptor) domain MKW86_18995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_18995 PF00672 HAMP domain MKW86_19000 PF07308 Protein of unknown function (DUF1456) MKW86_19005 PF01510 N-acetylmuramoyl-L-alanine amidase MKW86_19015 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ MKW86_19020 PF11967 Recombination protein O N terminal MKW86_19020 PF02565 Recombination protein O C terminal MKW86_19025 PF07650 KH domain MKW86_19025 PF01926 50S ribosome-binding GTPase MKW86_19030 PF14622 Ribonuclease-III-like MKW86_19030 PF00035 Double-stranded RNA binding motif MKW86_19035 PF10502 Signal peptidase, peptidase S26 MKW86_19040 PF00679 Elongation factor G C-terminus MKW86_19040 PF00009 Elongation factor Tu GTP binding domain MKW86_19040 PF03144 Elongation factor Tu domain 2 MKW86_19040 PF06421 GTP-binding protein LepA C-terminus MKW86_19050 PF03888 MucB/RseB N-terminal domain MKW86_19050 PF17188 MucB/RseB C-terminal domain MKW86_19055 PF03872 Anti sigma-E protein RseA, N-terminal domain MKW86_19055 PF03873 Anti sigma-E protein RseA, C-terminal domain MKW86_19060 PF04542 Sigma-70 region 2 MKW86_19060 PF08281 Sigma-70, region 4 MKW86_19065 PF00890 FAD binding domain MKW86_19065 PF02910 Fumarate reductase flavoprotein C-term MKW86_19075 PF03937 Flavinator of succinate dehydrogenase MKW86_19080 PF01571 Aminomethyltransferase folate-binding domain MKW86_19085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_19085 PF03466 LysR substrate binding domain MKW86_19100 PF03091 CutA1 divalent ion tolerance protein MKW86_19105 PF11412 Disulphide bond corrector protein DsbC MKW86_19105 PF02683 Cytochrome C biogenesis protein transmembrane region MKW86_19115 PF01266 FAD dependent oxidoreductase MKW86_19120 PF01116 Fructose-bisphosphate aldolase class-II MKW86_19125 PF00162 Phosphoglycerate kinase MKW86_19130 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MKW86_19130 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MKW86_19135 PF00480 ROK family MKW86_19140 PF01208 Uroporphyrinogen decarboxylase (URO-D) MKW86_19145 PF00293 NUDIX domain MKW86_19145 PF09297 NADH pyrophosphatase zinc ribbon domain MKW86_19150 PF01619 Proline dehydrogenase MKW86_19150 PF00171 Aldehyde dehydrogenase family MKW86_19150 PF14850 DNA-binding domain of Proline dehydrogenase MKW86_19150 PF18327 Proline utilization A proline dehydrogenase N-terminal domain MKW86_19155 PF08239 Bacterial SH3 domain MKW86_19160 PF00520 Ion transport protein MKW86_19160 PF00027 Cyclic nucleotide-binding domain MKW86_19165 PF02743 Cache domain MKW86_19165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_19165 PF00672 HAMP domain MKW86_19175 PF03710 Glutamate-ammonia ligase adenylyltransferase MKW86_19175 PF08335 GlnD PII-uridylyltransferase MKW86_19195 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MKW86_19195 PF00326 Prolyl oligopeptidase family MKW86_19200 PF00291 Pyridoxal-phosphate dependent enzyme MKW86_19205 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_19210 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_19215 PF00005 ABC transporter MKW86_19220 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKW86_19225 PF00005 ABC transporter MKW86_19225 PF12704 MacB-like periplasmic core domain MKW86_19225 PF02687 FtsX-like permease family MKW86_19230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKW86_19235 PF00486 Transcriptional regulatory protein, C terminal MKW86_19235 PF00072 Response regulator receiver domain MKW86_19240 PF16527 Two-component sensor protein CpxA, periplasmic domain MKW86_19240 PF00672 HAMP domain MKW86_19240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_19240 PF00512 His Kinase A (phospho-acceptor) domain MKW86_19245 PF00293 NUDIX domain MKW86_19245 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain MKW86_19245 PF09297 NADH pyrophosphatase zinc ribbon domain MKW86_19275 PF03060 Nitronate monooxygenase MKW86_19285 PF00445 Ribonuclease T2 family MKW86_19300 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase MKW86_19315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_19315 PF03466 LysR substrate binding domain MKW86_19320 PF00271 Helicase conserved C-terminal domain MKW86_19320 PF00270 DEAD/DEAH box helicase MKW86_19330 PF00753 Metallo-beta-lactamase superfamily MKW86_19340 PF01425 Amidase MKW86_19345 PF04371 Porphyromonas-type peptidyl-arginine deiminase MKW86_19350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_19350 PF03466 LysR substrate binding domain MKW86_19360 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MKW86_19365 PF00583 Acetyltransferase (GNAT) family MKW86_19385 PF00009 Elongation factor Tu GTP binding domain MKW86_19385 PF03144 Elongation factor Tu domain 2 MKW86_19385 PF16658 Class II release factor RF3, C-terminal domain MKW86_19390 PF00990 Diguanylate cyclase, GGDEF domain MKW86_19390 PF00072 Response regulator receiver domain MKW86_19395 PF03707 Bacterial signalling protein N terminal repeat MKW86_19395 PF13188 PAS domain MKW86_19395 PF00990 Diguanylate cyclase, GGDEF domain MKW86_19395 PF00563 EAL domain MKW86_19400 PF05762 VWA domain containing CoxE-like protein MKW86_19405 PF12592 Protein of unknown function (DUF3763) MKW86_19405 PF17868 AAA lid domain MKW86_19405 PF07728 AAA domain (dynein-related subfamily) MKW86_19415 PF00583 Acetyltransferase (GNAT) family MKW86_19425 PF00501 AMP-binding enzyme MKW86_19435 PF04262 Glutamate-cysteine ligase MKW86_19440 PF05193 Peptidase M16 inactive domain MKW86_19440 PF00675 Insulinase (Peptidase family M16) MKW86_19445 PF09335 SNARE associated Golgi protein MKW86_19450 PF08240 Alcohol dehydrogenase GroES-like domain MKW86_19450 PF16197 Ketoacyl-synthetase C-terminal extension MKW86_19450 PF00109 Beta-ketoacyl synthase, N-terminal domain MKW86_19450 PF02801 Beta-ketoacyl synthase, C-terminal domain MKW86_19450 PF08659 KR domain MKW86_19450 PF00550 Phosphopantetheine attachment site MKW86_19450 PF14765 Polyketide synthase dehydratase MKW86_19450 PF08990 Erythronolide synthase docking MKW86_19450 PF00698 Acyl transferase domain MKW86_19470 PF00175 Oxidoreductase NAD-binding domain MKW86_19470 PF00970 Oxidoreductase FAD-binding domain MKW86_19475 PF01281 Ribosomal protein L9, N-terminal domain MKW86_19475 PF03948 Ribosomal protein L9, C-terminal domain MKW86_19480 PF01084 Ribosomal protein S18 MKW86_19485 PF01250 Ribosomal protein S6 MKW86_19490 PF01566 Natural resistance-associated macrophage protein MKW86_19510 PF13673 Acetyltransferase (GNAT) domain MKW86_19520 PF00588 SpoU rRNA Methylase family MKW86_19520 PF08032 RNA 2'-O ribose methyltransferase substrate binding MKW86_19525 PF08206 Ribonuclease B OB domain MKW86_19525 PF00773 RNB domain MKW86_19525 PF00575 S1 RNA binding domain MKW86_19525 PF17876 Cold shock domain MKW86_19525 PF08461 Ribonuclease R winged-helix domain MKW86_19530 PF00990 Diguanylate cyclase, GGDEF domain MKW86_19535 PF02664 S-Ribosylhomocysteinase (LuxS) MKW86_19545 PF00543 Nitrogen regulatory protein P-II MKW86_19550 PF00795 Carbon-nitrogen hydrolase MKW86_19550 PF02540 NAD synthase MKW86_19585 PF05567 Neisseria PilC beta-propeller domain MKW86_19610 PF02401 LytB protein MKW86_19615 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MKW86_19620 PF01252 Signal peptidase (SPase) II MKW86_19625 PF00133 tRNA synthetases class I (I, L, M and V) MKW86_19625 PF08264 Anticodon-binding domain of tRNA MKW86_19625 PF06827 Zinc finger found in FPG and IleRS MKW86_19630 PF06574 FAD synthetase MKW86_19630 PF01687 Riboflavin kinase MKW86_19640 PF03023 Lipid II flippase MurJ MKW86_19645 PF01649 Ribosomal protein S20 MKW86_19650 PF01022 Bacterial regulatory protein, arsR family MKW86_19655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_19655 PF03466 LysR substrate binding domain MKW86_19665 PF06965 Na+/H+ antiporter 1 MKW86_19670 PF00303 Thymidylate synthase MKW86_19675 PF01790 Prolipoprotein diacylglyceryl transferase MKW86_19680 PF02896 PEP-utilising enzyme, TIM barrel domain MKW86_19680 PF00391 PEP-utilising enzyme, mobile domain MKW86_19680 PF05524 PEP-utilising enzyme, N-terminal MKW86_19680 PF01590 GAF domain MKW86_19685 PF00293 NUDIX domain MKW86_19690 PF02976 DNA mismatch repair enzyme MutH MKW86_19700 PF01245 Ribosomal protein L19 MKW86_19705 PF01746 tRNA (Guanine-1)-methyltransferase MKW86_19710 PF05239 PRC-barrel domain MKW86_19710 PF01782 RimM N-terminal domain MKW86_19715 PF00886 Ribosomal protein S16 MKW86_19720 PF00448 SRP54-type protein, GTPase domain MKW86_19720 PF02881 SRP54-type protein, helical bundle domain MKW86_19720 PF02978 Signal peptide binding domain MKW86_19725 PF01578 Cytochrome C assembly protein MKW86_19730 PF01595 Cyclin M transmembrane N-terminal domain MKW86_19730 PF03471 Transporter associated domain MKW86_19730 PF00571 CBS domain MKW86_19735 PF02082 Transcriptional regulator MKW86_19740 PF00175 Oxidoreductase NAD-binding domain MKW86_19740 PF00042 Globin MKW86_19740 PF00970 Oxidoreductase FAD-binding domain MKW86_19745 PF08238 Sel1 repeat MKW86_19750 PF00056 lactate/malate dehydrogenase, NAD binding domain MKW86_19750 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MKW86_19755 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_19760 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_19765 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKW86_19770 PF00005 ABC transporter MKW86_19775 PF02863 Arginine repressor, C-terminal domain MKW86_19775 PF01316 Arginine repressor, DNA binding domain MKW86_19780 PF04261 Dyp-type peroxidase family MKW86_19785 PF00005 ABC transporter MKW86_19785 PF08402 TOBE domain MKW86_19795 PF13416 Bacterial extracellular solute-binding protein MKW86_19800 PF00543 Nitrogen regulatory protein P-II MKW86_19805 PF00472 RF-1 domain MKW86_19810 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MKW86_19810 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MKW86_19815 PF07670 Nucleoside recognition MKW86_19815 PF01773 Na+ dependent nucleoside transporter N-terminus MKW86_19815 PF07662 Na+ dependent nucleoside transporter C-terminus MKW86_19820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_19820 PF03466 LysR substrate binding domain MKW86_19825 PF00255 Glutathione peroxidase MKW86_19835 PF02595 Glycerate kinase family MKW86_19840 PF02447 GntP family permease MKW86_19845 PF13556 PucR C-terminal helix-turn-helix domain MKW86_19845 PF17853 GGDEF-like domain MKW86_19845 PF05651 Putative sugar diacid recognition MKW86_19860 PF06062 Uncharacterised protein family (UPF0231) MKW86_19875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_19875 PF08447 PAS fold MKW86_19880 PF03372 Endonuclease/Exonuclease/phosphatase family MKW86_19895 PF00270 DEAD/DEAH box helicase MKW86_19895 PF00271 Helicase conserved C-terminal domain MKW86_19905 PF08534 Redoxin MKW86_19910 PF00403 Heavy-metal-associated domain MKW86_19915 PF17967 Pullulanase N2 domain MKW86_19915 PF03714 Bacterial pullanase-associated domain MKW86_19915 PF11852 Domain of unknown function (DUF3372) MKW86_19915 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MKW86_19915 PF18494 Pullulanase Ins domain MKW86_19930 PF02583 Metal-sensitive transcriptional repressor MKW86_19935 PF00155 Aminotransferase class I and II MKW86_19940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_19940 PF03466 LysR substrate binding domain MKW86_19950 PF04055 Radical SAM superfamily MKW86_19955 PF11230 Protein of unknown function (DUF3029) MKW86_19975 PF14684 Tricorn protease C1 domain MKW86_19975 PF03572 Peptidase family S41 MKW86_19975 PF07676 WD40-like Beta Propeller Repeat MKW86_19975 PF14685 Tricorn protease PDZ domain MKW86_20005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_20005 PF00672 HAMP domain MKW86_20005 PF12729 Four helix bundle sensory module for signal transduction MKW86_20010 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading MKW86_20010 PF18416 N-acetylglucosamine binding protein domain 2 MKW86_20015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_20015 PF03466 LysR substrate binding domain MKW86_20020 PF00005 ABC transporter MKW86_20020 PF12857 TOBE-like domain MKW86_20025 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_20030 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_20045 PF13194 Domain of unknown function (DUF4010) MKW86_20050 PF12464 Maltose acetyltransferase MKW86_20050 PF14602 Hexapeptide repeat of succinyl-transferase MKW86_20085 PF14698 Argininosuccinate lyase C-terminal MKW86_20085 PF00206 Lyase MKW86_20090 PF00764 Arginosuccinate synthase MKW86_20095 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MKW86_20095 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MKW86_20100 PF00696 Amino acid kinase family MKW86_20105 PF01118 Semialdehyde dehydrogenase, NAD binding domain MKW86_20105 PF02774 Semialdehyde dehydrogenase, dimerisation domain MKW86_20110 PF07687 Peptidase dimerisation domain MKW86_20110 PF01546 Peptidase family M20/M25/M40 MKW86_20115 PF00311 Phosphoenolpyruvate carboxylase MKW86_20125 PF00696 Amino acid kinase family MKW86_20125 PF00742 Homoserine dehydrogenase MKW86_20125 PF03447 Homoserine dehydrogenase, NAD binding domain MKW86_20130 PF01053 Cys/Met metabolism PLP-dependent enzyme MKW86_20135 PF01340 Met Apo-repressor, MetJ MKW86_20140 PF06445 GyrI-like small molecule binding domain MKW86_20140 PF12833 Helix-turn-helix domain MKW86_20145 PF01588 Putative tRNA binding domain MKW86_20150 PF03222 Tryptophan/tyrosine permease family MKW86_20155 PF00459 Inositol monophosphatase family MKW86_20160 PF00293 NUDIX domain MKW86_20165 PF13419 Haloacid dehalogenase-like hydrolase MKW86_20170 PF00579 tRNA synthetases class I (W and Y) MKW86_20170 PF01479 S4 domain MKW86_20175 PF00196 Bacterial regulatory proteins, luxR family MKW86_20180 PF01203 Type II secretion system (T2SS), protein N MKW86_20185 PF04612 Type II secretion system (T2SS), protein M MKW86_20190 PF05134 Type II secretion system (T2SS), protein L MKW86_20190 PF12693 GspL periplasmic domain MKW86_20195 PF03934 Type II secretion system (T2SS), protein K MKW86_20200 PF11612 Type II secretion system (T2SS), protein J MKW86_20200 PF07963 Prokaryotic N-terminal methylation motif MKW86_20205 PF02501 Type II secretion system (T2SS), protein I MKW86_20205 PF07963 Prokaryotic N-terminal methylation motif MKW86_20210 PF12019 Type II transport protein GspH MKW86_20210 PF07963 Prokaryotic N-terminal methylation motif MKW86_20220 PF07963 Prokaryotic N-terminal methylation motif MKW86_20220 PF08334 Type II secretion system (T2SS), protein G MKW86_20225 PF00482 Type II secretion system (T2SS), protein F MKW86_20230 PF00437 Type II/IV secretion system protein MKW86_20235 PF00263 Bacterial type II and III secretion system protein MKW86_20235 PF03958 Bacterial type II/III secretion system short domain MKW86_20240 PF11356 Type II secretion system protein C MKW86_20245 PF01479 S4 domain MKW86_20250 PF01430 Hsp33 protein MKW86_20255 PF01293 Phosphoenolpyruvate carboxykinase MKW86_20260 PF00392 Bacterial regulatory proteins, gntR family MKW86_20265 PF00557 Metallopeptidase family M24 MKW86_20265 PF01321 Creatinase/Prolidase N-terminal domain MKW86_20270 PF11756 Nitrous oxide-stimulated promoter MKW86_20275 PF00583 Acetyltransferase (GNAT) family MKW86_20280 PF05433 Glycine zipper 2TM domain MKW86_20285 PF02872 5'-nucleotidase, C-terminal domain MKW86_20285 PF00149 Calcineurin-like phosphoesterase MKW86_20290 PF01810 LysE type translocator MKW86_20295 PF03472 Autoinducer binding domain MKW86_20295 PF00196 Bacterial regulatory proteins, luxR family MKW86_20300 PF00765 Autoinducer synthase MKW86_20305 PF03466 LysR substrate binding domain MKW86_20305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_20310 PF08206 Ribonuclease B OB domain MKW86_20310 PF00773 RNB domain MKW86_20310 PF17876 Cold shock domain MKW86_20320 PF00440 Bacterial regulatory proteins, tetR family MKW86_20330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKW86_20330 PF02378 Phosphotransferase system, EIIC MKW86_20330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKW86_20335 PF08125 Mannitol dehydrogenase C-terminal domain MKW86_20335 PF01232 Mannitol dehydrogenase Rossmann domain MKW86_20340 PF05068 Mannitol repressor MKW86_20345 PF03471 Transporter associated domain MKW86_20345 PF02080 TrkA-C domain MKW86_20345 PF00999 Sodium/hydrogen exchanger family MKW86_20365 PF01544 CorA-like Mg2+ transporter protein MKW86_20370 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 MKW86_20385 PF04307 LexA-binding, inner membrane-associated putative hydrolase MKW86_20390 PF07670 Nucleoside recognition MKW86_20390 PF07662 Na+ dependent nucleoside transporter C-terminus MKW86_20390 PF01773 Na+ dependent nucleoside transporter N-terminus MKW86_20395 PF03880 DbpA RNA binding domain MKW86_20395 PF00270 DEAD/DEAH box helicase MKW86_20395 PF00271 Helicase conserved C-terminal domain MKW86_20420 PF01040 UbiA prenyltransferase family MKW86_20425 PF00425 chorismate binding enzyme MKW86_20430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MKW86_20430 PF16582 Middle domain of thiamine pyrophosphate MKW86_20430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MKW86_20435 PF12697 Alpha/beta hydrolase family MKW86_20440 PF00378 Enoyl-CoA hydratase/isomerase MKW86_20445 PF13378 Enolase C-terminal domain-like MKW86_20450 PF00501 AMP-binding enzyme MKW86_20450 PF13193 AMP-binding enzyme C-terminal domain MKW86_20460 PF00419 Fimbrial protein MKW86_20465 PF00419 Fimbrial protein MKW86_20470 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain MKW86_20470 PF02753 Pili assembly chaperone PapD, C-terminal domain MKW86_20475 PF13954 PapC N-terminal domain MKW86_20475 PF00577 Outer membrane usher protein MKW86_20475 PF13953 PapC C-terminal domain MKW86_20485 PF00419 Fimbrial protein MKW86_20495 PF01752 Collagenase MKW86_20495 PF08453 Peptidase family M9 N-terminal MKW86_20500 PF02698 DUF218 domain MKW86_20505 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MKW86_20505 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MKW86_20515 PF00561 alpha/beta hydrolase fold MKW86_20520 PF03280 Proteobacterial lipase chaperone protein MKW86_20535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKW86_20535 PF12793 Sugar transport-related sRNA regulator N-term MKW86_20545 PF01053 Cys/Met metabolism PLP-dependent enzyme MKW86_20555 PF00465 Iron-containing alcohol dehydrogenase MKW86_20570 PF03577 Peptidase family C69 MKW86_20575 PF00106 short chain dehydrogenase MKW86_20595 PF02308 MgtC family MKW86_20600 PF00128 Alpha amylase, catalytic domain MKW86_20600 PF02903 Alpha amylase, N-terminal ig-like domain MKW86_20600 PF16657 Maltogenic Amylase, C-terminal domain MKW86_20615 PF00884 Sulfatase MKW86_20620 PF01037 Lrp/AsnC ligand binding domain MKW86_20630 PF04204 Homoserine O-succinyltransferase MKW86_20635 PF12072 Domain of unknown function (DUF3552) MKW86_20635 PF01966 HD domain MKW86_20635 PF00013 KH domain MKW86_20640 PF02464 Competence-damaged protein MKW86_20640 PF00994 Probable molybdopterin binding domain MKW86_20650 PF00005 ABC transporter MKW86_20670 PF07722 Peptidase C26 MKW86_20680 PF00027 Cyclic nucleotide-binding domain MKW86_20680 PF13545 Crp-like helix-turn-helix domain MKW86_20690 PF13419 Haloacid dehalogenase-like hydrolase MKW86_20695 PF00589 Phage integrase family MKW86_20695 PF02899 Phage integrase, N-terminal SAM-like domain MKW86_20705 PF01678 Diaminopimelate epimerase MKW86_20710 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MKW86_20710 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MKW86_20720 PF01491 Frataxin-like domain MKW86_20725 PF02230 Phospholipase/Carboxylesterase MKW86_20730 PF12633 Adenylate cyclase NT domain MKW86_20730 PF01295 Adenylate cyclase, class-I MKW86_20735 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MKW86_20735 PF03900 Porphobilinogen deaminase, C-terminal domain MKW86_20740 PF02602 Uroporphyrinogen-III synthase HemD MKW86_20745 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase MKW86_20755 PF03692 Putative zinc- or iron-chelating domain MKW86_20760 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded MKW86_20775 PF07715 TonB-dependent Receptor Plug Domain MKW86_20775 PF00593 TonB dependent receptor MKW86_20800 PF01638 HxlR-like helix-turn-helix MKW86_20805 PF08803 Putative mono-oxygenase ydhR MKW86_20820 PF06055 Exopolysaccharide synthesis, ExoD MKW86_20830 PF00990 Diguanylate cyclase, GGDEF domain MKW86_20845 PF13036 Peptidoglycan-synthase activator LpoB MKW86_20850 PF13302 Acetyltransferase (GNAT) domain MKW86_20860 PF06968 Biotin and Thiamin Synthesis associated domain MKW86_20860 PF04055 Radical SAM superfamily MKW86_20865 PF05690 Thiazole biosynthesis protein ThiG MKW86_20875 PF00899 ThiF family MKW86_20880 PF02581 Thiamine monophosphate synthase MKW86_20885 PF13667 ThiC-associated domain MKW86_20885 PF01964 Radical SAM ThiC family MKW86_20890 PF01117 Aerolysin toxin MKW86_20890 PF03440 Aerolysin/Pertussis toxin (APT) domain MKW86_20905 PF00072 Response regulator receiver domain MKW86_20905 PF00486 Transcriptional regulatory protein, C terminal MKW86_20910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_20915 PF05525 Branched-chain amino acid transport protein MKW86_20920 PF08443 RimK-like ATP-grasp domain MKW86_20920 PF18030 RimK PreATP-grasp domain MKW86_20925 PF02574 Homocysteine S-methyltransferase MKW86_20925 PF00809 Pterin binding enzyme MKW86_20925 PF02965 Vitamin B12 dependent methionine synthase, activation domain MKW86_20925 PF02310 B12 binding domain MKW86_20925 PF02607 B12 binding domain MKW86_20930 PF00999 Sodium/hydrogen exchanger family MKW86_20945 PF08668 HDOD domain MKW86_20955 PF04228 Putative neutral zinc metallopeptidase MKW86_20960 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) MKW86_20975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_20975 PF08447 PAS fold MKW86_20975 PF13426 PAS domain MKW86_20980 PF01740 STAS domain MKW86_20980 PF08678 Rsbr N terminal MKW86_20985 PF13581 Histidine kinase-like ATPase domain MKW86_20990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_20990 PF00512 His Kinase A (phospho-acceptor) domain MKW86_20990 PF01627 Hpt domain MKW86_20990 PF00072 Response regulator receiver domain MKW86_20990 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MKW86_20990 PF00672 HAMP domain MKW86_20995 PF00072 Response regulator receiver domain MKW86_21005 PF07690 Major Facilitator Superfamily MKW86_21010 PF01914 MarC family integral membrane protein MKW86_21025 PF13580 SIS domain MKW86_21030 PF00367 phosphotransferase system, EIIB MKW86_21030 PF02378 Phosphotransferase system, EIIC MKW86_21045 PF01418 Helix-turn-helix domain, rpiR family MKW86_21045 PF01380 SIS domain MKW86_21050 PF01523 Putative modulator of DNA gyrase MKW86_21055 PF00795 Carbon-nitrogen hydrolase MKW86_21070 PF13502 AsmA-like C-terminal region MKW86_21070 PF13116 Protein of unknown function MKW86_21075 PF10150 Ribonuclease E/G family MKW86_21075 PF00575 S1 RNA binding domain MKW86_21080 PF02545 Maf-like protein MKW86_21085 PF04093 rod shape-determining protein MreD MKW86_21090 PF04085 rod shape-determining protein MreC MKW86_21120 PF14245 Type IV pilin PilA MKW86_21120 PF07963 Prokaryotic N-terminal methylation motif MKW86_21125 PF07963 Prokaryotic N-terminal methylation motif MKW86_21125 PF08334 Type II secretion system (T2SS), protein G MKW86_21130 PF07963 Prokaryotic N-terminal methylation motif MKW86_21140 PF00482 Type II secretion system (T2SS), protein F MKW86_21145 PF00437 Type II/IV secretion system protein MKW86_21145 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MKW86_21160 PF00263 Bacterial type II and III secretion system protein MKW86_21160 PF03958 Bacterial type II/III secretion system short domain MKW86_21190 PF00563 EAL domain MKW86_21190 PF17157 Gammaproteobacterial periplasmic sensor domain MKW86_21190 PF00990 Diguanylate cyclase, GGDEF domain MKW86_21195 PF00563 EAL domain MKW86_21195 PF12792 CSS motif domain associated with EAL MKW86_21200 PF01699 Sodium/calcium exchanger protein MKW86_21205 PF00221 Aromatic amino acid lyase MKW86_21210 PF17391 Urocanase N-terminal domain MKW86_21210 PF17392 Urocanase C-terminal domain MKW86_21210 PF01175 Urocanase Rossmann-like domain MKW86_21215 PF00491 Arginase family MKW86_21220 PF01979 Amidohydrolase family MKW86_21225 PF07702 UTRA domain MKW86_21225 PF00392 Bacterial regulatory proteins, gntR family MKW86_21230 PF00484 Carbonic anhydrase MKW86_21235 PF04545 Sigma-70, region 4 MKW86_21235 PF04542 Sigma-70 region 2 MKW86_21235 PF00140 Sigma-70 factor, region 1.2 MKW86_21240 PF18075 FtsX extracellular domain MKW86_21245 PF00005 ABC transporter MKW86_21250 PF00448 SRP54-type protein, GTPase domain MKW86_21250 PF02881 SRP54-type protein, helical bundle domain MKW86_21265 PF07226 Protein of unknown function (DUF1422) MKW86_21270 PF00440 Bacterial regulatory proteins, tetR family MKW86_21280 PF13091 PLD-like domain MKW86_21290 PF01464 Transglycosylase SLT domain MKW86_21300 PF02416 mttA/Hcf106 family MKW86_21305 PF03466 LysR substrate binding domain MKW86_21305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_21310 PF01914 MarC family integral membrane protein MKW86_21315 PF10678 Protein of unknown function (DUF2492) MKW86_21320 PF00375 Sodium:dicarboxylate symporter family MKW86_21330 PF03466 LysR substrate binding domain MKW86_21330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_21335 PF13533 Biotin-lipoyl like MKW86_21340 PF07690 Major Facilitator Superfamily MKW86_21345 PF07947 YhhN family MKW86_21365 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MKW86_21365 PF00326 Prolyl oligopeptidase family MKW86_21380 PF00106 short chain dehydrogenase MKW86_21385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_21385 PF03466 LysR substrate binding domain MKW86_21390 PF02525 Flavodoxin-like fold MKW86_21395 PF00999 Sodium/hydrogen exchanger family MKW86_21395 PF02254 TrkA-N domain MKW86_21440 PF01196 Ribosomal protein L17 MKW86_21445 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MKW86_21445 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MKW86_21445 PF01000 RNA polymerase Rpb3/RpoA insert domain MKW86_21450 PF00163 Ribosomal protein S4/S9 N-terminal domain MKW86_21450 PF01479 S4 domain MKW86_21455 PF00411 Ribosomal protein S11 MKW86_21460 PF00416 Ribosomal protein S13/S18 MKW86_21465 PF00444 Ribosomal protein L36 MKW86_21470 PF00344 SecY translocase MKW86_21475 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MKW86_21480 PF00327 Ribosomal protein L30p/L7e MKW86_21485 PF00333 Ribosomal protein S5, N-terminal domain MKW86_21485 PF03719 Ribosomal protein S5, C-terminal domain MKW86_21490 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MKW86_21495 PF00347 Ribosomal protein L6 MKW86_21500 PF00410 Ribosomal protein S8 MKW86_21505 PF00253 Ribosomal protein S14p/S29e MKW86_21510 PF00281 Ribosomal protein L5 MKW86_21510 PF00673 ribosomal L5P family C-terminus MKW86_21515 PF00467 KOW motif MKW86_21515 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MKW86_21520 PF00238 Ribosomal protein L14p/L23e MKW86_21525 PF00366 Ribosomal protein S17 MKW86_21530 PF00831 Ribosomal L29 protein MKW86_21535 PF00252 Ribosomal protein L16p/L10e MKW86_21540 PF07650 KH domain MKW86_21540 PF00189 Ribosomal protein S3, C-terminal domain MKW86_21545 PF00237 Ribosomal protein L22p/L17e MKW86_21550 PF00203 Ribosomal protein S19 MKW86_21555 PF00181 Ribosomal Proteins L2, RNA binding domain MKW86_21555 PF03947 Ribosomal Proteins L2, C-terminal domain MKW86_21560 PF00276 Ribosomal protein L23 MKW86_21565 PF00573 Ribosomal protein L4/L1 family MKW86_21570 PF00297 Ribosomal protein L3 MKW86_21575 PF00338 Ribosomal protein S10p/S20e MKW86_21585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_21585 PF00512 His Kinase A (phospho-acceptor) domain MKW86_21585 PF00672 HAMP domain MKW86_21590 PF00486 Transcriptional regulatory protein, C terminal MKW86_21590 PF00072 Response regulator receiver domain MKW86_21595 PF01272 Transcription elongation factor, GreA/GreB, C-term MKW86_21595 PF03449 Transcription elongation factor, N-terminal MKW86_21600 PF17674 HHH domain MKW86_21600 PF00575 S1 RNA binding domain MKW86_21600 PF09371 Tex-like protein N-terminal domain MKW86_21600 PF16921 Tex protein YqgF-like domain MKW86_21620 PF00561 alpha/beta hydrolase fold MKW86_21630 PF01521 Iron-sulphur cluster biosynthesis MKW86_21630 PF01106 NifU-like domain MKW86_21635 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MKW86_21635 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MKW86_21640 PF02556 Preprotein translocase subunit SecB MKW86_21645 PF00581 Rhodanese-like domain MKW86_21650 PF06415 BPG-independent PGAM N-terminus (iPGM_N) MKW86_21650 PF01676 Metalloenzyme superfamily MKW86_21655 PF01551 Peptidase family M23 MKW86_21665 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MKW86_21665 PF00356 Bacterial regulatory proteins, lacI family MKW86_21670 PF01081 KDPG and KHG aldolase MKW86_21675 PF00920 Dehydratase family MKW86_21680 PF01202 Shikimate kinase MKW86_21685 PF02447 GntP family permease MKW86_21690 PF13091 PLD-like domain MKW86_21695 PF00270 DEAD/DEAH box helicase MKW86_21695 PF17191 RecG wedge domain MKW86_21695 PF00271 Helicase conserved C-terminal domain MKW86_21705 PF00583 Acetyltransferase (GNAT) family MKW86_21705 PF09500 Putative thioesterase (yiiD_Cterm) MKW86_21715 PF02580 D-Tyr-tRNA(Tyr) deacylase MKW86_21720 PF03631 Virulence factor BrkB MKW86_21725 PF03631 Virulence factor BrkB MKW86_21730 PF03144 Elongation factor Tu domain 2 MKW86_21730 PF00009 Elongation factor Tu GTP binding domain MKW86_21730 PF00679 Elongation factor G C-terminus MKW86_21735 PF03951 Glutamine synthetase, beta-Grasp domain MKW86_21735 PF00120 Glutamine synthetase, catalytic domain MKW86_21745 PF00512 His Kinase A (phospho-acceptor) domain MKW86_21745 PF00989 PAS fold MKW86_21745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_21750 PF02954 Bacterial regulatory protein, Fis family MKW86_21750 PF00072 Response regulator receiver domain MKW86_21750 PF00158 Sigma-54 interaction domain MKW86_21755 PF00962 Adenosine/AMP deaminase MKW86_21760 PF06969 HemN C-terminal domain MKW86_21760 PF04055 Radical SAM superfamily MKW86_21765 PF10675 Protein of unknown function (DUF2489) MKW86_21770 PF04220 Der GTPase activator (YihI) MKW86_21775 PF00034 Cytochrome c MKW86_21780 PF01926 50S ribosome-binding GTPase MKW86_21785 PF07369 Protein of unknown function (DUF1488) MKW86_21790 PF08501 Shikimate dehydrogenase substrate binding domain MKW86_21790 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MKW86_21790 PF01488 Shikimate / quinate 5-dehydrogenase MKW86_21795 PF01218 Coproporphyrinogen III oxidase MKW86_21800 PF01300 Telomere recombination MKW86_21805 PF00731 AIR carboxylase MKW86_21810 PF01396 Topoisomerase DNA binding C4 zinc finger MKW86_21815 PF04361 Protein of unknown function (DUF494) MKW86_21820 PF17782 DprA winged helix domain MKW86_21820 PF02481 DNA recombination-mediator protein A MKW86_21830 PF01327 Polypeptide deformylase MKW86_21835 PF02911 Formyl transferase, C-terminal domain MKW86_21835 PF00551 Formyl transferase MKW86_21840 PF01189 16S rRNA methyltransferase RsmB/F MKW86_21840 PF01029 NusB family MKW86_21845 PF02254 TrkA-N domain MKW86_21845 PF02080 TrkA-C domain MKW86_21850 PF02386 Cation transport protein MKW86_21855 PF02646 RmuC family MKW86_21870 PF02082 Transcriptional regulator MKW86_21875 PF00294 pfkB family carbohydrate kinase MKW86_21880 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MKW86_21880 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MKW86_21885 PF02540 NAD synthase MKW86_21885 PF00958 GMP synthase C terminal domain MKW86_21885 PF00117 Glutamine amidotransferase class-I MKW86_21890 PF00171 Aldehyde dehydrogenase family MKW86_21895 PF00202 Aminotransferase class-III MKW86_21900 PF01381 Helix-turn-helix MKW86_21900 PF07883 Cupin domain MKW86_21905 PF00171 Aldehyde dehydrogenase family MKW86_21915 PF00892 EamA-like transporter family MKW86_21920 PF12833 Helix-turn-helix domain MKW86_21925 PF01810 LysE type translocator MKW86_21935 PF00689 Cation transporting ATPase, C-terminus MKW86_21935 PF00690 Cation transporter/ATPase, N-terminus MKW86_21940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_21940 PF00672 HAMP domain MKW86_21940 PF12729 Four helix bundle sensory module for signal transduction MKW86_21945 PF04143 Sulphur transport MKW86_21950 PF01810 LysE type translocator MKW86_21960 PF06206 CpeT/CpcT family (DUF1001) MKW86_21985 PF14001 YdfZ protein MKW86_22005 PF03466 LysR substrate binding domain MKW86_22005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_22035 PF00580 UvrD/REP helicase N-terminal domain MKW86_22035 PF13361 UvrD-like helicase C-terminal domain MKW86_22040 PF02608 ABC transporter substrate-binding protein PnrA-like MKW86_22045 PF00005 ABC transporter MKW86_22050 PF02653 Branched-chain amino acid transport system / permease component MKW86_22055 PF02653 Branched-chain amino acid transport system / permease component MKW86_22060 PF03466 LysR substrate binding domain MKW86_22060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_22065 PF08240 Alcohol dehydrogenase GroES-like domain MKW86_22065 PF00107 Zinc-binding dehydrogenase MKW86_22070 PF00756 Putative esterase MKW86_22080 PF03781 Sulfatase-modifying factor enzyme 1 MKW86_22080 PF12867 DinB superfamily MKW86_22085 PF13593 SBF-like CPA transporter family (DUF4137) MKW86_22090 PF13520 Amino acid permease MKW86_22095 PF01588 Putative tRNA binding domain MKW86_22100 PF13520 Amino acid permease MKW86_22105 PF04074 YhcH/YjgK/YiaL MKW86_22110 PF02929 Beta galactosidase small chain MKW86_22110 PF00703 Glycosyl hydrolases family 2 MKW86_22110 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MKW86_22110 PF02837 Glycosyl hydrolases family 2, sugar binding domain MKW86_22110 PF16353 Domain of unknown function(DUF4981) MKW86_22115 PF00356 Bacterial regulatory proteins, lacI family MKW86_22155 PF00132 Bacterial transferase hexapeptide (six repeats) MKW86_22160 PF00476 DNA polymerase family A MKW86_22160 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MKW86_22160 PF01367 5'-3' exonuclease, C-terminal SAM fold MKW86_22160 PF01612 3'-5' exonuclease MKW86_22170 PF06005 Cell division protein ZapB MKW86_22180 PF00132 Bacterial transferase hexapeptide (six repeats) MKW86_22180 PF06426 Serine acetyltransferase, N-terminal MKW86_22185 PF01545 Cation efflux family MKW86_22185 PF16916 Dimerisation domain of Zinc Transporter MKW86_22190 PF00072 Response regulator receiver domain MKW86_22190 PF00486 Transcriptional regulatory protein, C terminal MKW86_22195 PF00512 His Kinase A (phospho-acceptor) domain MKW86_22195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_22195 PF00672 HAMP domain MKW86_22195 PF16527 Two-component sensor protein CpxA, periplasmic domain MKW86_22200 PF00588 SpoU rRNA Methylase family MKW86_22205 PF01554 MatE MKW86_22210 PF02630 SCO1/SenC MKW86_22220 PF00717 Peptidase S24-like MKW86_22220 PF01726 LexA DNA binding domain MKW86_22225 PF01553 Acyltransferase MKW86_22230 PF01040 UbiA prenyltransferase family MKW86_22235 PF04345 Chorismate lyase MKW86_22240 PF03748 Flagellar basal body-associated protein FliL MKW86_22255 PF00107 Zinc-binding dehydrogenase MKW86_22255 PF08240 Alcohol dehydrogenase GroES-like domain MKW86_22260 PF00356 Bacterial regulatory proteins, lacI family MKW86_22260 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MKW86_22265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKW86_22275 PF03611 PTS system sugar-specific permease component MKW86_22280 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) MKW86_22285 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MKW86_22290 PF00535 Glycosyl transferase family 2 MKW86_22295 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MKW86_22300 PF01467 Cytidylyltransferase-like MKW86_22305 PF04393 Protein of unknown function (DUF535) MKW86_22310 PF06827 Zinc finger found in FPG and IleRS MKW86_22310 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MKW86_22310 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MKW86_22320 PF00471 Ribosomal protein L33 MKW86_22325 PF00830 Ribosomal L28 family MKW86_22330 PF04002 RadC-like JAB domain MKW86_22335 PF04127 DNA / pantothenate metabolism flavoprotein MKW86_22335 PF02441 Flavoprotein MKW86_22340 PF00692 dUTPase MKW86_22345 PF00440 Bacterial regulatory proteins, tetR family MKW86_22350 PF00924 Mechanosensitive ion channel MKW86_22350 PF05552 Conserved TM helix MKW86_22360 PF00342 Phosphoglucose isomerase MKW86_22365 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MKW86_22365 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MKW86_22370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKW86_22370 PF03466 LysR substrate binding domain MKW86_22385 PF13607 Succinyl-CoA ligase like flavodoxin domain MKW86_22385 PF13380 CoA binding domain MKW86_22385 PF00583 Acetyltransferase (GNAT) family MKW86_22415 PF12724 Flavodoxin domain MKW86_22420 PF02386 Cation transport protein MKW86_22425 PF01205 Uncharacterized protein family UPF0029 MKW86_22425 PF09186 Domain of unknown function (DUF1949) MKW86_22430 PF00557 Metallopeptidase family M24 MKW86_22435 PF13193 AMP-binding enzyme C-terminal domain MKW86_22435 PF00501 AMP-binding enzyme MKW86_22440 PF00378 Enoyl-CoA hydratase/isomerase MKW86_22440 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MKW86_22440 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MKW86_22445 PF00108 Thiolase, N-terminal domain MKW86_22445 PF02803 Thiolase, C-terminal domain MKW86_22450 PF00486 Transcriptional regulatory protein, C terminal MKW86_22450 PF00072 Response regulator receiver domain MKW86_22455 PF00512 His Kinase A (phospho-acceptor) domain MKW86_22455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_22455 PF00672 HAMP domain MKW86_22460 PF01547 Bacterial extracellular solute-binding protein MKW86_22470 PF01206 Sulfurtransferase TusA MKW86_22475 PF01042 Endoribonuclease L-PSP MKW86_22480 PF00691 OmpA family MKW86_22480 PF13488 Glycine zipper MKW86_22485 PF02743 Cache domain MKW86_22485 PF00672 HAMP domain MKW86_22485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKW86_22490 PF03352 Methyladenine glycosylase MKW86_22495 PF02091 Glycyl-tRNA synthetase alpha subunit MKW86_22500 PF05746 DALR anticodon binding domain MKW86_22500 PF02092 Glycyl-tRNA synthetase beta subunit MKW86_22510 PF01202 Shikimate kinase MKW86_22530 PF12801 4Fe-4S binding domain MKW86_22540 PF18113 Rubredoxin binding C-terminal domain MKW86_22540 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKW86_22545 PF00258 Flavodoxin MKW86_22545 PF00753 Metallo-beta-lactamase superfamily MKW86_22545 PF00301 Rubredoxin MKW86_22550 PF00158 Sigma-54 interaction domain MKW86_22550 PF01590 GAF domain MKW86_22555 PF00392 Bacterial regulatory proteins, gntR family MKW86_22555 PF07702 UTRA domain MKW86_22560 PF00367 phosphotransferase system, EIIB MKW86_22560 PF02378 Phosphotransferase system, EIIC MKW86_22565 PF11975 Family 4 glycosyl hydrolase C-terminal domain MKW86_22565 PF02056 Family 4 glycosyl hydrolase MKW86_22570 PF00356 Bacterial regulatory proteins, lacI family MKW86_22575 PF13458 Periplasmic binding protein MKW86_22580 PF02653 Branched-chain amino acid transport system / permease component MKW86_22585 PF11862 Domain of unknown function (DUF3382) MKW86_22585 PF02653 Branched-chain amino acid transport system / permease component MKW86_22590 PF12399 Branched-chain amino acid ATP-binding cassette transporter MKW86_22590 PF00005 ABC transporter MKW86_22595 PF00005 ABC transporter MKW86_22610 PF00581 Rhodanese-like domain MKW86_22615 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease MKW86_22615 PF01694 Rhomboid family MKW86_22620 PF12262 Bacterial virulence factor lipase N-terminal MKW86_22625 PF04380 Membrane fusogenic activity MKW86_22630 PF00175 Oxidoreductase NAD-binding domain MKW86_22635 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase MKW86_22645 PF07497 Rho termination factor, RNA-binding domain MKW86_22645 PF07498 Rho termination factor, N-terminal domain MKW86_22645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MKW86_22650 PF00085 Thioredoxin MKW86_22655 PF00271 Helicase conserved C-terminal domain MKW86_22655 PF00270 DEAD/DEAH box helicase MKW86_22660 PF02541 Ppx/GppA phosphatase family MKW86_22675 PF04445 Putative SAM-dependent methyltransferase MKW86_22680 PF00563 EAL domain MKW86_22680 PF00990 Diguanylate cyclase, GGDEF domain MKW86_22680 PF03707 Bacterial signalling protein N terminal repeat MKW86_22685 PF01432 Peptidase family M3 MKW86_22690 PF00490 Delta-aminolevulinic acid dehydratase MKW86_22695 PF01026 TatD related DNase MKW86_22700 PF00902 Sec-independent protein translocase protein (TatC) MKW86_22705 PF02416 mttA/Hcf106 family MKW86_22710 PF02416 mttA/Hcf106 family MKW86_22715 PF03109 ABC1 family MKW86_22720 PF02036 SCP-2 sterol transfer family MKW86_22725 PF01209 ubiE/COQ5 methyltransferase family MKW86_22730 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MKW86_22735 PF07969 Amidohydrolase family MKW86_22775 PF03544 Gram-negative bacterial TonB protein C-terminal MKW86_22780 PF02472 Biopolymer transport protein ExbD/TolR MKW86_22785 PF01618 MotA/TolQ/ExbB proton channel family MKW86_22790 PF01618 MotA/TolQ/ExbB proton channel family MKW86_22800 PF00196 Bacterial regulatory proteins, luxR family MKW86_22800 PF03472 Autoinducer binding domain MKW86_22805 PF01380 SIS domain MKW86_22810 PF00455 DeoR C terminal sensor domain MKW86_22810 PF08220 DeoR-like helix-turn-helix domain MKW86_22815 PF00072 Response regulator receiver domain MKW86_22815 PF00486 Transcriptional regulatory protein, C terminal MKW86_22820 PF00512 His Kinase A (phospho-acceptor) domain MKW86_22820 PF00672 HAMP domain MKW86_22820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKW86_22825 PF00905 Penicillin binding protein transpeptidase domain MKW86_22830 PF06123 Inner membrane protein CreD MKW86_22835 PF00132 Bacterial transferase hexapeptide (six repeats) MKW86_22835 PF14602 Hexapeptide repeat of succinyl-transferase MKW86_22835 PF12804 MobA-like NTP transferase domain MKW86_22840 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain MKW86_22840 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MKW86_22845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MKW86_22845 PF02874 ATP synthase alpha/beta family, beta-barrel domain MKW86_22850 PF00231 ATP synthase MKW86_22855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MKW86_22855 PF02874 ATP synthase alpha/beta family, beta-barrel domain MKW86_22855 PF00306 ATP synthase alpha/beta chain, C terminal domain MKW86_22860 PF00213 ATP synthase delta (OSCP) subunit MKW86_22865 PF00430 ATP synthase B/B' CF(0) MKW86_22870 PF00137 ATP synthase subunit C MKW86_22875 PF00119 ATP synthase A chain MKW86_22885 PF17762 HTH domain found in ParB protein MKW86_22885 PF02195 ParB-like nuclease domain MKW86_22890 PF13614 AAA domain MKW86_22895 PF02527 rRNA small subunit methyltransferase G MKW86_22900 PF01134 Glucose inhibited division protein A MKW86_22900 PF13932 GidA associated domain MKW86_22905 PF00258 Flavodoxin MKW86_22910 PF00593 TonB dependent receptor MKW86_22910 PF07715 TonB-dependent Receptor Plug Domain MKW86_22915 PF00005 ABC transporter MKW86_22920 PF00005 ABC transporter MKW86_22930 PF01032 FecCD transport family MKW86_22935 PF01926 50S ribosome-binding GTPase MKW86_22935 PF12631 MnmE helical domain MKW86_22935 PF10396 GTP-binding protein TrmE N-terminus MKW86_22940 PF02096 60Kd inner membrane protein MKW86_22940 PF14849 YidC periplasmic domain MKW86_22945 PF01809 Putative membrane protein insertion efficiency factor MKW86_22950 PF00825 Ribonuclease P MKW86_22955 PF00468 Ribosomal protein L34 MKW86_22960 PF00005 ABC transporter MKW86_22965 PF00528 Binding-protein-dependent transport system inner membrane component MKW86_22970 PF00497 Bacterial extracellular solute-binding proteins, family 3