AHML_00005 SM00382 ATPases associated with a variety of cellular activities AHML_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AHML_00010 SM00480 DNA polymerase III beta subunit AHML_00020 SM00387 Histidine kinase-like ATPases AHML_00020 SM00433 TopoisomeraseII AHML_00055 SM00342 helix_turn_helix, arabinose operon control protein AHML_00065 SM00448 cheY-homologous receiver domain AHML_00065 SM00862 Transcriptional regulatory protein, C terminal AHML_00070 SM00387 Histidine kinase-like ATPases AHML_00070 SM00388 His Kinase A (phosphoacceptor) domain AHML_00100 SM00091 PAS domain AHML_00100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_00100 SM00387 Histidine kinase-like ATPases AHML_00120 SM00458 Ricin-type beta-trefoil AHML_00140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_00140 SM00387 Histidine kinase-like ATPases AHML_00140 SM00388 His Kinase A (phosphoacceptor) domain AHML_00145 SM00448 cheY-homologous receiver domain AHML_00175 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AHML_00175 SM00954 Region found in RelA / SpoT proteins AHML_00180 SM01409 AHML_00180 AHML_00185 SM00072 Guanylate kinase homologues. AHML_00200 SM00267 diguanylate cyclase AHML_00245 SM00267 diguanylate cyclase AHML_00275 SM00530 Helix-turn-helix XRE-family like proteins AHML_00290 SM00487 DEAD-like helicases superfamily AHML_00360 SM00421 helix_turn_helix, Lux Regulon AHML_00360 SM00448 cheY-homologous receiver domain AHML_00365 SM00062 Bacterial periplasmic substrate-binding proteins AHML_00365 SM00387 Histidine kinase-like ATPases AHML_00365 SM00388 His Kinase A (phosphoacceptor) domain AHML_00365 SM00448 cheY-homologous receiver domain AHML_00375 SM00387 Histidine kinase-like ATPases AHML_00380 SM00448 cheY-homologous receiver domain AHML_00380 SM00850 LytTr DNA-binding domain AHML_00395 SM01001 AIR carboxylase AHML_00425 SM00360 RNA recognition motif AHML_00480 SM01004 Delta-aminolevulinic acid dehydratase AHML_00490 SM00052 Putative diguanylate phosphodiesterase AHML_00490 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AHML_00490 SM00091 PAS domain AHML_00490 SM00267 diguanylate cyclase AHML_00515 SM00487 DEAD-like helicases superfamily AHML_00515 SM00490 helicase superfamily c-terminal domain AHML_00525 SM00357 Cold shock protein domain AHML_00525 SM00382 ATPases associated with a variety of cellular activities AHML_00525 SM00959 Rho termination factor, N-terminal domain AHML_00560 SM00450 Rhodanese Homology Domain AHML_00570 SM00342 helix_turn_helix, arabinose operon control protein AHML_00575 SM00382 ATPases associated with a variety of cellular activities AHML_00580 SM00382 ATPases associated with a variety of cellular activities AHML_00600 SM00354 helix_turn _helix lactose operon repressor AHML_00615 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHML_00615 SM00866 AHML_00615 AHML_00620 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AHML_00620 SM00382 ATPases associated with a variety of cellular activities AHML_00625 SM00849 Metallo-beta-lactamase superfamily AHML_00680 SM00836 DALR anticodon binding domain AHML_00725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_00725 SM00387 Histidine kinase-like ATPases AHML_00725 SM00388 His Kinase A (phosphoacceptor) domain AHML_00730 SM00448 cheY-homologous receiver domain AHML_00730 SM00862 Transcriptional regulatory protein, C terminal AHML_00770 SM00881 CoA binding domain AHML_00850 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AHML_00850 SM01232 AHML_00850 AHML_00900 SM00354 helix_turn _helix lactose operon repressor AHML_00905 SM00829 Enoylreductase AHML_00940 SM00563 Phosphate acyltransferases AHML_00975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_00975 SM00387 Histidine kinase-like ATPases AHML_00975 SM00388 His Kinase A (phosphoacceptor) domain AHML_00980 SM00448 cheY-homologous receiver domain AHML_00980 SM00862 Transcriptional regulatory protein, C terminal AHML_00990 SM00971 Serine acetyltransferase, N-terminal AHML_01010 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AHML_01010 SM00474 3'-5' exonuclease AHML_01010 SM00475 5'-3' exonuclease AHML_01010 SM00482 DNA polymerase A domain AHML_01020 SM00354 helix_turn _helix lactose operon repressor AHML_01025 SM01038 Beta galactosidase small chain AHML_01070 SM00829 Enoylreductase AHML_01090 SM00382 ATPases associated with a variety of cellular activities AHML_01105 SM01321 AHML_01105 AHML_01165 SM00831 Cation transporter/ATPase, N-terminus AHML_01175 SM00342 helix_turn_helix, arabinose operon control protein AHML_01195 SM00530 Helix-turn-helix XRE-family like proteins AHML_01215 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AHML_01215 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AHML_01270 SM00257 Lysin motif AHML_01290 SM01001 AIR carboxylase AHML_01340 SM00729 Elongator protein 3, MiaB family, Radical SAM AHML_01350 SM00382 ATPases associated with a variety of cellular activities AHML_01350 SM00448 cheY-homologous receiver domain AHML_01355 SM00091 PAS domain AHML_01355 SM00387 Histidine kinase-like ATPases AHML_01355 SM00388 His Kinase A (phosphoacceptor) domain AHML_01365 SM01230 AHML_01365 AHML_01400 SM00487 DEAD-like helicases superfamily AHML_01400 SM00490 helicase superfamily c-terminal domain AHML_01405 SM00155 Phospholipase D. Active site motifs. AHML_01430 SM00354 helix_turn _helix lactose operon repressor AHML_01450 SM00450 Rhodanese Homology Domain AHML_01495 SM00316 Ribosomal protein S1-like RNA-binding domain AHML_01495 SM00732 Likely ribonuclease with RNase H fold. AHML_01505 SM00448 cheY-homologous receiver domain AHML_01505 SM00862 Transcriptional regulatory protein, C terminal AHML_01510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_01510 SM00387 Histidine kinase-like ATPases AHML_01510 SM00388 His Kinase A (phosphoacceptor) domain AHML_01520 SM01403 AHML_01520 AHML_01540 SM01382 AHML_01540 AHML_01540 SM01383 AHML_01540 AHML_01555 SM00322 K homology RNA-binding domain AHML_01575 SM01374 AHML_01575 AHML_01645 SM00363 S4 RNA-binding domain AHML_01645 SM01390 AHML_01645 AHML_01650 SM00662 RNA polymerases D AHML_01690 SM00822 AHML_01690 AHML_01785 SM00062 Bacterial periplasmic substrate-binding proteins AHML_01790 SM00155 Phospholipase D. Active site motifs. AHML_01830 SM00382 ATPases associated with a variety of cellular activities AHML_01830 SM00962 SRP54-type protein, GTPase domain AHML_01830 SM00963 SRP54-type protein, helical bundle domain AHML_01835 SM00382 ATPases associated with a variety of cellular activities AHML_01850 SM00947 Carbonic anhydrase AHML_01855 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHML_01855 SM00866 AHML_01855 AHML_01885 SM00052 Putative diguanylate phosphodiesterase AHML_01890 SM00052 Putative diguanylate phosphodiesterase AHML_01890 SM00267 diguanylate cyclase AHML_01920 SM00965 Secretin and TonB N terminus short domain AHML_01935 SM00382 ATPases associated with a variety of cellular activities AHML_02005 SM00316 Ribosomal protein S1-like RNA-binding domain AHML_02015 SM00886 Stress responsive A/B Barrel Domain AHML_02075 SM00448 cheY-homologous receiver domain AHML_02075 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AHML_02080 SM00387 Histidine kinase-like ATPases AHML_02080 SM00388 His Kinase A (phosphoacceptor) domain AHML_02080 SM00448 cheY-homologous receiver domain AHML_02085 SM00331 Sigma factor PP2C-like phosphatases AHML_02085 SM00387 Histidine kinase-like ATPases AHML_02095 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AHML_02095 SM00091 PAS domain AHML_02100 SM00342 helix_turn_helix, arabinose operon control protein AHML_02145 SM00862 Transcriptional regulatory protein, C terminal AHML_02230 SM01018 B12 binding domain AHML_02245 SM00388 His Kinase A (phosphoacceptor) domain AHML_02250 SM00448 cheY-homologous receiver domain AHML_02250 SM00862 Transcriptional regulatory protein, C terminal AHML_02265 SM00999 Aerolysin toxin AHML_02295 SM00876 Biotin and Thiamin Synthesis associated domain AHML_02320 SM00267 diguanylate cyclase AHML_02430 SM01219 AHML_02430 AHML_02465 SM00100 Cyclic nucleotide-monophosphate binding domain AHML_02495 SM00382 ATPases associated with a variety of cellular activities AHML_02510 SM00852 Probable molybdopterin binding domain AHML_02530 SM00344 helix_turn_helix ASNC type AHML_02550 SM00642 Alpha-amylase domain AHML_02695 SM00862 Transcriptional regulatory protein, C terminal AHML_02705 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AHML_02755 SM00487 DEAD-like helicases superfamily AHML_02755 SM00490 helicase superfamily c-terminal domain AHML_02835 SM00357 Cold shock protein domain AHML_02835 SM00955 AHML_02835 AHML_02850 SM00421 helix_turn_helix, Lux Regulon AHML_02885 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHML_02885 SM00895 AHML_02885 AHML_02900 SM00363 S4 RNA-binding domain AHML_02915 SM00382 ATPases associated with a variety of cellular activities AHML_02970 SM00421 helix_turn_helix, Lux Regulon AHML_03005 SM00342 helix_turn_helix, arabinose operon control protein AHML_03040 SM00859 Semialdehyde dehydrogenase, NAD binding domain AHML_03085 SM01266 AHML_03085 AHML_03115 SM00382 ATPases associated with a variety of cellular activities AHML_03130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_03130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_03130 SM01049 AHML_03130 AHML_03160 SM00245 tail specific protease AHML_03250 SM00487 DEAD-like helicases superfamily AHML_03250 SM00490 helicase superfamily c-terminal domain AHML_03270 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_03335 SM00938 Nitrogen regulatory protein P-II AHML_03350 SM00382 ATPases associated with a variety of cellular activities AHML_03365 SM00382 ATPases associated with a variety of cellular activities AHML_03370 SM00062 Bacterial periplasmic substrate-binding proteins AHML_03370 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AHML_03390 SM00671 Sel1-like repeats. AHML_03405 SM01091 Transporter associated domain AHML_03415 SM00382 ATPases associated with a variety of cellular activities AHML_03415 SM00962 SRP54-type protein, GTPase domain AHML_03415 SM00963 SRP54-type protein, helical bundle domain AHML_03445 SM00927 DNA mismatch repair enzyme MutH AHML_03455 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AHML_03485 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AHML_03500 SM00904 Riboflavin kinase AHML_03585 SM00938 Nitrogen regulatory protein P-II AHML_03600 SM00267 diguanylate cyclase AHML_03605 SM00316 Ribosomal protein S1-like RNA-binding domain AHML_03605 SM00357 Cold shock protein domain AHML_03605 SM00955 AHML_03605 AHML_03610 SM00967 RNA 2'-O ribose methyltransferase substrate binding AHML_03680 SM00829 Enoylreductase AHML_03725 SM00382 ATPases associated with a variety of cellular activities AHML_03730 SM00327 von Willebrand factor (vWF) type A domain AHML_03735 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AHML_03735 SM00091 PAS domain AHML_03735 SM00267 diguanylate cyclase AHML_03740 SM00028 Tetratricopeptide repeats AHML_03740 SM00267 diguanylate cyclase AHML_03755 SM00347 helix_turn_helix multiple antibiotic resistance protein AHML_03765 SM00347 helix_turn_helix multiple antibiotic resistance protein AHML_03800 SM00849 Metallo-beta-lactamase superfamily AHML_03810 SM00487 DEAD-like helicases superfamily AHML_03810 SM00490 helicase superfamily c-terminal domain AHML_03870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_03870 SM00387 Histidine kinase-like ATPases AHML_03870 SM00388 His Kinase A (phosphoacceptor) domain AHML_03875 SM00448 cheY-homologous receiver domain AHML_03875 SM00862 Transcriptional regulatory protein, C terminal AHML_03885 SM00382 ATPases associated with a variety of cellular activities AHML_03890 SM00062 Bacterial periplasmic substrate-binding proteins AHML_03895 SM00382 ATPases associated with a variety of cellular activities AHML_03945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_03945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_03955 SM00287 Bacterial SH3 domain homologues AHML_03980 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AHML_04080 SM00358 Double-stranded RNA binding motif AHML_04080 SM00535 Ribonuclease III family AHML_04145 SM00420 helix_turn_helix, Deoxyribose operon repressor AHML_04145 SM01134 AHML_04145 AHML_04150 SM00644 AHML_04150 AHML_04160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_04160 SM00387 Histidine kinase-like ATPases AHML_04160 SM00388 His Kinase A (phosphoacceptor) domain AHML_04160 SM00448 cheY-homologous receiver domain AHML_04170 SM00954 Region found in RelA / SpoT proteins AHML_04185 SM01192 AHML_04185 AHML_04185 SM01193 AHML_04185 AHML_04225 SM00257 Lysin motif AHML_04250 SM00400 zinc finger AHML_04250 SM00493 AHML_04250 AHML_04250 SM00766 DNA primase DnaG DnaB-binding AHML_04260 SM01126 AHML_04260 AHML_04265 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AHML_04265 SM00632 AHML_04265 AHML_04265 SM00642 Alpha-amylase domain AHML_04280 SM01209 AHML_04280 AHML_04280 SM01210 AHML_04280 AHML_04285 SM00798 AICARFT/IMPCHase bienzyme AHML_04285 SM00851 MGS-like domain AHML_04290 SM00422 helix_turn_helix, mercury resistance AHML_04305 SM00729 Elongator protein 3, MiaB family, Radical SAM AHML_04380 SM00883 Chaperonin 10 Kd subunit AHML_04395 SM00052 Putative diguanylate phosphodiesterase AHML_04395 SM00267 diguanylate cyclase AHML_04400 SM01126 AHML_04400 AHML_04410 SM00487 DEAD-like helicases superfamily AHML_04410 SM00490 helicase superfamily c-terminal domain AHML_04430 SM00670 Large family of predicted nucleotide-binding domains AHML_04435 SM00382 ATPases associated with a variety of cellular activities AHML_04470 SM01329 AHML_04470 AHML_04475 SM00917 LeuA allosteric (dimerisation) domain AHML_04485 SM00014 Acid phosphatase homologues AHML_04540 SM01130 AHML_04540 AHML_04585 SM00073 Histidine Phosphotransfer domain AHML_04585 SM00091 PAS domain AHML_04585 SM00387 Histidine kinase-like ATPases AHML_04585 SM00388 His Kinase A (phosphoacceptor) domain AHML_04585 SM00448 cheY-homologous receiver domain AHML_04590 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AHML_04600 SM00062 Bacterial periplasmic substrate-binding proteins AHML_04600 SM00073 Histidine Phosphotransfer domain AHML_04600 SM00091 PAS domain AHML_04600 SM00387 Histidine kinase-like ATPases AHML_04600 SM00388 His Kinase A (phosphoacceptor) domain AHML_04600 SM00448 cheY-homologous receiver domain AHML_04605 SM00052 Putative diguanylate phosphodiesterase AHML_04605 SM00448 cheY-homologous receiver domain AHML_04610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_04610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_04615 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AHML_04630 SM00382 ATPases associated with a variety of cellular activities AHML_04630 SM00930 AHML_04630 AHML_04660 SM00257 Lysin motif AHML_04660 SM00646 AHML_04660 AHML_04665 SM00853 MutL C terminal dimerisation domain AHML_04665 SM01340 AHML_04665 AHML_04685 SM00244 prohibitin homologues AHML_04690 SM00244 prohibitin homologues AHML_04740 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AHML_04750 SM00530 Helix-turn-helix XRE-family like proteins AHML_04765 SM00650 Ribosomal RNA adenine dimethylases AHML_04795 SM00271 DnaJ molecular chaperone homology domain AHML_04810 SM00382 ATPases associated with a variety of cellular activities AHML_04865 SM00530 Helix-turn-helix XRE-family like proteins AHML_04940 SM00382 ATPases associated with a variety of cellular activities AHML_04950 SM00382 ATPases associated with a variety of cellular activities AHML_04990 SM00507 HNH nucleases AHML_05140 SM01133 AHML_05140 AHML_05160 SM00382 ATPases associated with a variety of cellular activities AHML_05210 SM00530 Helix-turn-helix XRE-family like proteins AHML_05220 SM00387 Histidine kinase-like ATPases AHML_05220 SM00388 His Kinase A (phosphoacceptor) domain AHML_05220 SM00448 cheY-homologous receiver domain AHML_05225 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AHML_05225 SM00495 Chitin-binding domain type 3 AHML_05225 SM00636 AHML_05225 AHML_05235 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AHML_05235 SM00495 Chitin-binding domain type 3 AHML_05245 SM00100 Cyclic nucleotide-monophosphate binding domain AHML_05245 SM00419 helix_turn_helix, cAMP Regulatory protein AHML_05305 SM00984 UDP binding domain AHML_05315 SM00267 diguanylate cyclase AHML_05325 SM00260 Two component signalling adaptor domain AHML_05325 SM00448 cheY-homologous receiver domain AHML_05350 SM00320 WD40 repeats AHML_05360 SM00382 ATPases associated with a variety of cellular activities AHML_05360 SM00448 cheY-homologous receiver domain AHML_05385 SM00052 Putative diguanylate phosphodiesterase AHML_05390 SM00978 AHML_05390 AHML_05400 SM00382 ATPases associated with a variety of cellular activities AHML_05410 SM01005 Alanine racemase, C-terminal domain AHML_05425 SM00052 Putative diguanylate phosphodiesterase AHML_05445 SM00448 cheY-homologous receiver domain AHML_05455 SM00138 Methyltransferase, chemotaxis proteins AHML_05460 SM00091 PAS domain AHML_05460 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_05460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_05465 SM00260 Two component signalling adaptor domain AHML_05470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_05470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_05475 SM00073 Histidine Phosphotransfer domain AHML_05475 SM00260 Two component signalling adaptor domain AHML_05475 SM00387 Histidine kinase-like ATPases AHML_05475 SM01231 AHML_05475 AHML_05485 SM00448 cheY-homologous receiver domain AHML_05490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_05525 SM00342 helix_turn_helix, arabinose operon control protein AHML_05525 SM00478 endonuclease III AHML_05525 SM01009 AlkA N-terminal domain AHML_05540 SM00463 Small MutS-related domain AHML_05570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_05570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_05625 SM00382 ATPases associated with a variety of cellular activities AHML_05640 SM00100 Cyclic nucleotide-monophosphate binding domain AHML_05640 SM00419 helix_turn_helix, cAMP Regulatory protein AHML_05680 SM00342 helix_turn_helix, arabinose operon control protein AHML_05710 SM00487 DEAD-like helicases superfamily AHML_05710 SM00490 helicase superfamily c-terminal domain AHML_05730 SM00487 DEAD-like helicases superfamily AHML_05730 SM00490 helicase superfamily c-terminal domain AHML_05815 SM00530 Helix-turn-helix XRE-family like proteins AHML_05850 SM00830 Chorismate mutase type II AHML_05885 SM00422 helix_turn_helix, mercury resistance AHML_05965 SM00421 helix_turn_helix, Lux Regulon AHML_06070 SM00900 AHML_06070 AHML_06110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_06110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_06140 SM01329 AHML_06140 AHML_06145 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AHML_06145 SM00475 5'-3' exonuclease AHML_06155 SM00267 diguanylate cyclase AHML_06160 SM00028 Tetratricopeptide repeats AHML_06240 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AHML_06285 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AHML_06295 SM00935 Outer membrane protein (OmpH-like) AHML_06325 SM00481 DNA polymerase alpha chain like domain AHML_06335 SM00862 Transcriptional regulatory protein, C terminal AHML_06370 SM00849 Metallo-beta-lactamase superfamily AHML_06390 SM00382 ATPases associated with a variety of cellular activities AHML_06405 SM00977 TilS substrate C-terminal domain AHML_06410 SM00267 diguanylate cyclase AHML_06435 SM00421 helix_turn_helix, Lux Regulon AHML_06435 SM00448 cheY-homologous receiver domain AHML_06445 SM00642 Alpha-amylase domain AHML_06470 SM00062 Bacterial periplasmic substrate-binding proteins AHML_06505 SM00771 ZipA, C-terminal domain (FtsZ-binding) AHML_06510 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AHML_06510 SM00292 breast cancer carboxy-terminal domain AHML_06510 SM00532 Ligase N family AHML_06545 SM00062 Bacterial periplasmic substrate-binding proteins AHML_06560 SM00347 helix_turn_helix multiple antibiotic resistance protein AHML_06570 SM00919 Malic enzyme, NAD binding domain AHML_06570 SM01274 AHML_06570 AHML_06575 SM00387 Histidine kinase-like ATPases AHML_06580 SM00448 cheY-homologous receiver domain AHML_06590 SM00342 helix_turn_helix, arabinose operon control protein AHML_06600 SM00382 ATPases associated with a variety of cellular activities AHML_06620 SM00448 cheY-homologous receiver domain AHML_06620 SM00862 Transcriptional regulatory protein, C terminal AHML_06625 SM00387 Histidine kinase-like ATPases AHML_06625 SM00388 His Kinase A (phosphoacceptor) domain AHML_06660 SM00382 ATPases associated with a variety of cellular activities AHML_06720 SM00267 diguanylate cyclase AHML_06735 SM00342 helix_turn_helix, arabinose operon control protein AHML_06740 SM00919 Malic enzyme, NAD binding domain AHML_06740 SM01274 AHML_06740 AHML_06770 SM00530 Helix-turn-helix XRE-family like proteins AHML_06785 SM00267 diguanylate cyclase AHML_06805 SM00729 Elongator protein 3, MiaB family, Radical SAM AHML_06850 SM00642 Alpha-amylase domain AHML_06870 SM00155 Phospholipase D. Active site motifs. AHML_06930 SM00487 DEAD-like helicases superfamily AHML_06930 SM00490 helicase superfamily c-terminal domain AHML_07025 SM00530 Helix-turn-helix XRE-family like proteins AHML_07100 SM00382 ATPases associated with a variety of cellular activities AHML_07115 SM01007 Class II Aldolase and Adducin N-terminal domain AHML_07135 SM01134 AHML_07135 AHML_07145 SM01130 AHML_07145 AHML_07220 SM00877 AHML_07220 AHML_07250 SM00877 AHML_07250 AHML_07255 SM00877 AHML_07255 AHML_07260 SM00877 AHML_07260 AHML_07270 SM00862 Transcriptional regulatory protein, C terminal AHML_07295 SM00481 DNA polymerase alpha chain like domain AHML_07335 SM00387 Histidine kinase-like ATPases AHML_07340 SM00448 cheY-homologous receiver domain AHML_07340 SM00862 Transcriptional regulatory protein, C terminal AHML_07345 SM00382 ATPases associated with a variety of cellular activities AHML_07355 SM00382 ATPases associated with a variety of cellular activities AHML_07380 SM00729 Elongator protein 3, MiaB family, Radical SAM AHML_07385 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AHML_07415 SM00382 ATPases associated with a variety of cellular activities AHML_07475 SM00382 ATPases associated with a variety of cellular activities AHML_07475 SM00962 SRP54-type protein, GTPase domain AHML_07490 SM00448 cheY-homologous receiver domain AHML_07500 SM00073 Histidine Phosphotransfer domain AHML_07500 SM00260 Two component signalling adaptor domain AHML_07500 SM00387 Histidine kinase-like ATPases AHML_07500 SM01231 AHML_07500 AHML_07505 SM00448 cheY-homologous receiver domain AHML_07525 SM00260 Two component signalling adaptor domain AHML_07530 SM00260 Two component signalling adaptor domain AHML_07540 SM00382 ATPases associated with a variety of cellular activities AHML_07640 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AHML_07720 SM00354 helix_turn _helix lactose operon repressor AHML_07760 SM00342 helix_turn_helix, arabinose operon control protein AHML_07765 SM01329 AHML_07765 AHML_07820 SM00487 DEAD-like helicases superfamily AHML_07965 SM00959 Rho termination factor, N-terminal domain AHML_08055 SM00859 Semialdehyde dehydrogenase, NAD binding domain AHML_08085 SM00858 AHML_08085 AHML_08105 SM00382 ATPases associated with a variety of cellular activities AHML_08175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_08175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_08200 SM01091 Transporter associated domain AHML_08265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_08275 SM00729 Elongator protein 3, MiaB family, Radical SAM AHML_08275 SM00876 Biotin and Thiamin Synthesis associated domain AHML_08300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_08315 SM00890 Domain of unknown function AHML_08325 SM00342 helix_turn_helix, arabinose operon control protein AHML_08400 SM00458 Ricin-type beta-trefoil AHML_08485 SM01081 Putative carbohydrate binding domain AHML_08540 SM00347 helix_turn_helix multiple antibiotic resistance protein AHML_08555 SM00382 ATPases associated with a variety of cellular activities AHML_08620 SM00052 Putative diguanylate phosphodiesterase AHML_08620 SM00267 diguanylate cyclase AHML_08655 SM00257 Lysin motif AHML_08660 SM00849 Metallo-beta-lactamase superfamily AHML_08675 SM00479 AHML_08675 AHML_08685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AHML_08705 SM00073 Histidine Phosphotransfer domain AHML_08715 SM00897 FIST N domain AHML_08715 SM01204 AHML_08715 AHML_08720 SM00387 Histidine kinase-like ATPases AHML_08720 SM00388 His Kinase A (phosphoacceptor) domain AHML_08720 SM00448 cheY-homologous receiver domain AHML_08725 SM00464 Found in ATP-dependent protease La (LON) AHML_08730 SM00421 helix_turn_helix, Lux Regulon AHML_08730 SM00448 cheY-homologous receiver domain AHML_08735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_08735 SM00387 Histidine kinase-like ATPases AHML_08740 SM00729 Elongator protein 3, MiaB family, Radical SAM AHML_08755 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AHML_08780 SM00852 Probable molybdopterin binding domain AHML_08810 SM00382 ATPases associated with a variety of cellular activities AHML_08825 SM00852 Probable molybdopterin binding domain AHML_08835 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_08835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_08855 SM00867 YceI-like domain AHML_08865 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AHML_08875 SM00563 Phosphate acyltransferases AHML_08895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_08895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_08920 SM00855 Phosphoglycerate mutase family AHML_08925 SM00487 DEAD-like helicases superfamily AHML_08925 SM00490 helicase superfamily c-terminal domain AHML_08945 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AHML_08955 SM00363 S4 RNA-binding domain AHML_08980 SM00871 Bacterial transcription activator, effector binding domain AHML_09010 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHML_09075 SM00420 helix_turn_helix, Deoxyribose operon repressor AHML_09075 SM01134 AHML_09075 AHML_09095 SM00830 Chorismate mutase type II AHML_09170 SM00382 ATPases associated with a variety of cellular activities AHML_09245 SM00382 ATPases associated with a variety of cellular activities AHML_09250 SM00062 Bacterial periplasmic substrate-binding proteins AHML_09250 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AHML_09275 SM00052 Putative diguanylate phosphodiesterase AHML_09275 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AHML_09275 SM00091 PAS domain AHML_09275 SM00267 diguanylate cyclase AHML_09280 SM00450 Rhodanese Homology Domain AHML_09315 SM01359 AHML_09315 AHML_09315 SM01360 AHML_09315 AHML_09330 SM00981 AHML_09330 AHML_09410 SM00858 AHML_09410 AHML_09470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_09470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_09530 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AHML_09570 SM00116 Domain in cystathionine beta-synthase and other proteins. AHML_09585 SM01323 AHML_09585 AHML_09600 SM00450 Rhodanese Homology Domain AHML_09605 SM00028 Tetratricopeptide repeats AHML_09660 SM00271 DnaJ molecular chaperone homology domain AHML_09685 SM00562 AHML_09685 AHML_09695 SM00028 Tetratricopeptide repeats AHML_09700 SM00530 Helix-turn-helix XRE-family like proteins AHML_09720 SM00564 beta-propeller repeat AHML_09735 SM00062 Bacterial periplasmic substrate-binding proteins AHML_09740 SM01211 AHML_09740 AHML_09745 SM01126 AHML_09745 AHML_09785 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AHML_09785 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AHML_09790 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AHML_09850 SM00360 RNA recognition motif AHML_09875 SM00091 PAS domain AHML_09900 SM00052 Putative diguanylate phosphodiesterase AHML_09900 SM00267 diguanylate cyclase AHML_09945 SM00316 Ribosomal protein S1-like RNA-binding domain AHML_09950 SM00411 bacterial (prokaryotic) histone like domain AHML_09960 SM00028 Tetratricopeptide repeats AHML_09965 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AHML_09975 SM01144 AHML_09975 AHML_10000 SM00528 Domain in histone-like proteins of HNS family AHML_10015 SM01154 AHML_10015 AHML_10050 SM00357 Cold shock protein domain AHML_10060 SM00382 ATPases associated with a variety of cellular activities AHML_10060 SM01086 C-terminal, D2-small domain, of ClpB protein AHML_10065 SM00316 Ribosomal protein S1-like RNA-binding domain AHML_10085 SM00267 diguanylate cyclase AHML_10085 SM00448 cheY-homologous receiver domain AHML_10095 SM00344 helix_turn_helix ASNC type AHML_10100 SM00843 AHML_10100 AHML_10110 SM00382 ATPases associated with a variety of cellular activities AHML_10135 SM00382 ATPases associated with a variety of cellular activities AHML_10140 SM00382 ATPases associated with a variety of cellular activities AHML_10160 SM00382 ATPases associated with a variety of cellular activities AHML_10205 SM00091 PAS domain AHML_10205 SM00382 ATPases associated with a variety of cellular activities AHML_10215 SM00267 diguanylate cyclase AHML_10215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_10280 SM01007 Class II Aldolase and Adducin N-terminal domain AHML_10295 SM00382 ATPases associated with a variety of cellular activities AHML_10305 SM00342 helix_turn_helix, arabinose operon control protein AHML_10370 SM00825 Beta-ketoacyl synthase AHML_10415 SM00861 Transketolase, pyrimidine binding domain AHML_10430 SM00881 CoA binding domain AHML_10455 SM00382 ATPases associated with a variety of cellular activities AHML_10465 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHML_10465 SM00866 AHML_10465 AHML_10505 SM00859 Semialdehyde dehydrogenase, NAD binding domain AHML_10535 SM00822 AHML_10535 AHML_10540 SM00342 helix_turn_helix, arabinose operon control protein AHML_10540 SM00871 Bacterial transcription activator, effector binding domain AHML_10570 SM00116 Domain in cystathionine beta-synthase and other proteins. AHML_10680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_10680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_10680 SM01049 AHML_10680 AHML_10690 SM00091 PAS domain AHML_10690 SM00387 Histidine kinase-like ATPases AHML_10695 SM00448 cheY-homologous receiver domain AHML_10715 SM00062 Bacterial periplasmic substrate-binding proteins AHML_10725 SM00487 DEAD-like helicases superfamily AHML_10725 SM00490 helicase superfamily c-terminal domain AHML_10750 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHML_10765 SM00763 PrkA AAA domain AHML_10770 SM00487 DEAD-like helicases superfamily AHML_10770 SM00490 helicase superfamily c-terminal domain AHML_10825 SM00387 Histidine kinase-like ATPases AHML_10825 SM00388 His Kinase A (phosphoacceptor) domain AHML_10825 SM00448 cheY-homologous receiver domain AHML_10830 SM00382 ATPases associated with a variety of cellular activities AHML_10840 SM00382 ATPases associated with a variety of cellular activities AHML_10905 SM01118 AHML_10905 AHML_10930 SM00487 DEAD-like helicases superfamily AHML_10930 SM00490 helicase superfamily c-terminal domain AHML_10940 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AHML_10955 SM01144 AHML_10955 AHML_10980 SM00342 helix_turn_helix, arabinose operon control protein AHML_10995 SM00642 Alpha-amylase domain AHML_11100 SM00782 PhnA Zinc-Ribbon AHML_11110 SM00495 Chitin-binding domain type 3 AHML_11125 SM00855 Phosphoglycerate mutase family AHML_11130 SM00091 PAS domain AHML_11130 SM00267 diguanylate cyclase AHML_11140 SM00463 Small MutS-related domain AHML_11155 SM00062 Bacterial periplasmic substrate-binding proteins AHML_11160 SM00487 DEAD-like helicases superfamily AHML_11160 SM00490 helicase superfamily c-terminal domain AHML_11170 SM00953 AHML_11170 AHML_11185 SM00354 helix_turn _helix lactose operon repressor AHML_11210 SM00354 helix_turn _helix lactose operon repressor AHML_11250 SM00925 MltA specific insert domain AHML_11280 SM00434 DNA Topoisomerase IV AHML_11295 SM00671 Sel1-like repeats. AHML_11300 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AHML_11325 SM00873 B3/4 domain AHML_11325 SM00874 tRNA synthetase B5 domain AHML_11325 SM00896 Ferredoxin-fold anticodon binding domain AHML_11330 SM00411 bacterial (prokaryotic) histone like domain AHML_11335 SM00062 Bacterial periplasmic substrate-binding proteins AHML_11335 SM00387 Histidine kinase-like ATPases AHML_11335 SM00388 His Kinase A (phosphoacceptor) domain AHML_11335 SM00448 cheY-homologous receiver domain AHML_11360 SM00267 diguanylate cyclase AHML_11365 SM00354 helix_turn _helix lactose operon repressor AHML_11385 SM00382 ATPases associated with a variety of cellular activities AHML_11420 SM00100 Cyclic nucleotide-monophosphate binding domain AHML_11420 SM00419 helix_turn_helix, cAMP Regulatory protein AHML_11475 SM00945 ProQ/FINO family AHML_11480 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AHML_11480 SM00245 tail specific protease AHML_11510 SM00981 AHML_11510 AHML_11520 SM00382 ATPases associated with a variety of cellular activities AHML_11560 SM00822 AHML_11560 AHML_11650 SM00382 ATPases associated with a variety of cellular activities AHML_11670 SM00825 Beta-ketoacyl synthase AHML_11680 SM00822 AHML_11680 AHML_11685 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AHML_11740 SM00363 S4 RNA-binding domain AHML_11745 SM00316 Ribosomal protein S1-like RNA-binding domain AHML_11785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_11790 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AHML_11815 SM00450 Rhodanese Homology Domain AHML_11820 SM00849 Metallo-beta-lactamase superfamily AHML_11825 SM00448 cheY-homologous receiver domain AHML_11825 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AHML_11830 SM00387 Histidine kinase-like ATPases AHML_11830 SM00388 His Kinase A (phosphoacceptor) domain AHML_11830 SM00448 cheY-homologous receiver domain AHML_11845 SM00382 ATPases associated with a variety of cellular activities AHML_11845 SM00487 DEAD-like helicases superfamily AHML_11845 SM00490 helicase superfamily c-terminal domain AHML_11845 SM00847 Helicase associated domain (HA2) Add an annotation AHML_11850 SM00116 Domain in cystathionine beta-synthase and other proteins. AHML_11855 SM00421 helix_turn_helix, Lux Regulon AHML_11870 SM00382 ATPases associated with a variety of cellular activities AHML_11905 SM00857 Resolvase, N terminal domain AHML_12005 SM00062 Bacterial periplasmic substrate-binding proteins AHML_12010 SM00341 Helicase and RNase D C-terminal AHML_12010 SM00474 3'-5' exonuclease AHML_12035 SM00491 AHML_12035 AHML_12075 SM00448 cheY-homologous receiver domain AHML_12075 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AHML_12080 SM00091 PAS domain AHML_12085 SM00073 Histidine Phosphotransfer domain AHML_12085 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AHML_12085 SM00091 PAS domain AHML_12085 SM00387 Histidine kinase-like ATPases AHML_12085 SM00388 His Kinase A (phosphoacceptor) domain AHML_12085 SM00448 cheY-homologous receiver domain AHML_12120 SM00237 Domains in Na-Ca exchangers and integrin-beta4 AHML_12130 SM01092 CO dehydrogenase flavoprotein C-terminal domain AHML_12135 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AHML_12155 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AHML_12160 SM01092 CO dehydrogenase flavoprotein C-terminal domain AHML_12220 SM00382 ATPases associated with a variety of cellular activities AHML_12250 SM01322 AHML_12250 AHML_12285 SM00327 von Willebrand factor (vWF) type A domain AHML_12290 SM00028 Tetratricopeptide repeats AHML_12325 SM00052 Putative diguanylate phosphodiesterase AHML_12335 SM00422 helix_turn_helix, mercury resistance AHML_12415 SM00347 helix_turn_helix multiple antibiotic resistance protein AHML_12470 SM00486 DNA polymerase type-B family AHML_12480 SM00267 diguanylate cyclase AHML_12490 SM00090 RIO-like kinase AHML_12520 SM00518 AP endonuclease family 2 AHML_12530 SM00822 AHML_12530 AHML_12535 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AHML_12545 SM00052 Putative diguanylate phosphodiesterase AHML_12545 SM00267 diguanylate cyclase AHML_12560 SM00267 diguanylate cyclase AHML_12610 SM00857 Resolvase, N terminal domain AHML_12630 SM00073 Histidine Phosphotransfer domain AHML_12630 SM00387 Histidine kinase-like ATPases AHML_12630 SM00388 His Kinase A (phosphoacceptor) domain AHML_12630 SM00448 cheY-homologous receiver domain AHML_12635 SM00052 Putative diguanylate phosphodiesterase AHML_12635 SM00448 cheY-homologous receiver domain AHML_12650 SM00885 D5 N terminal like AHML_12670 SM00822 AHML_12670 AHML_12715 SM00878 Biotin carboxylase C-terminal domain AHML_12715 SM01209 AHML_12715 AHML_12725 SM00422 helix_turn_helix, mercury resistance AHML_12730 SM00062 Bacterial periplasmic substrate-binding proteins AHML_12805 SM00100 Cyclic nucleotide-monophosphate binding domain AHML_12805 SM00116 Domain in cystathionine beta-synthase and other proteins. AHML_12810 SM00479 AHML_12810 AHML_12825 SM00382 ATPases associated with a variety of cellular activities AHML_12835 SM00411 bacterial (prokaryotic) histone like domain AHML_12840 SM00382 ATPases associated with a variety of cellular activities AHML_12840 SM00464 Found in ATP-dependent protease La (LON) AHML_12845 SM00382 ATPases associated with a variety of cellular activities AHML_12845 SM00994 ClpX C4-type zinc finger AHML_12845 SM01086 C-terminal, D2-small domain, of ClpB protein AHML_12865 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AHML_12875 SM00382 ATPases associated with a variety of cellular activities AHML_12890 SM00487 DEAD-like helicases superfamily AHML_12890 SM00490 helicase superfamily c-terminal domain AHML_12890 SM00982 AHML_12890 AHML_12890 SM01058 CarD-like/TRCF domain AHML_12915 SM00855 Phosphoglycerate mutase family AHML_12930 SM00369 Leucine-rich repeats, typical (most populated) subfamily AHML_12940 SM00342 helix_turn_helix, arabinose operon control protein AHML_13000 SM00116 Domain in cystathionine beta-synthase and other proteins. AHML_13000 SM01240 AHML_13000 AHML_13035 SM00729 Elongator protein 3, MiaB family, Radical SAM AHML_13040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_13040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_13060 SM00893 Electron transfer flavoprotein domain AHML_13065 SM00893 Electron transfer flavoprotein domain AHML_13110 SM00382 ATPases associated with a variety of cellular activities AHML_13130 SM00823 Phosphopantetheine attachment site AHML_13135 SM00822 AHML_13135 AHML_13140 SM00823 Phosphopantetheine attachment site AHML_13215 SM00387 Histidine kinase-like ATPases AHML_13220 SM00493 AHML_13220 AHML_13230 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AHML_13230 SM00382 ATPases associated with a variety of cellular activities AHML_13245 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AHML_13355 SM00382 ATPases associated with a variety of cellular activities AHML_13405 SM00448 cheY-homologous receiver domain AHML_13415 SM00073 Histidine Phosphotransfer domain AHML_13415 SM00260 Two component signalling adaptor domain AHML_13415 SM00387 Histidine kinase-like ATPases AHML_13415 SM01231 AHML_13415 AHML_13420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_13425 SM00260 Two component signalling adaptor domain AHML_13430 SM00138 Methyltransferase, chemotaxis proteins AHML_13435 SM00448 cheY-homologous receiver domain AHML_13440 SM00052 Putative diguanylate phosphodiesterase AHML_13440 SM00448 cheY-homologous receiver domain AHML_13445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_13445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_13450 SM01005 Alanine racemase, C-terminal domain AHML_13455 SM00873 B3/4 domain AHML_13460 SM00530 Helix-turn-helix XRE-family like proteins AHML_13570 SM00382 ATPases associated with a variety of cellular activities AHML_13810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_13810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_13840 SM01005 Alanine racemase, C-terminal domain AHML_13850 SM00382 ATPases associated with a variety of cellular activities AHML_13860 SM00382 ATPases associated with a variety of cellular activities AHML_13895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AHML_13900 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AHML_13905 SM00448 cheY-homologous receiver domain AHML_13905 SM00850 LytTr DNA-binding domain AHML_13925 SM00487 DEAD-like helicases superfamily AHML_13925 SM00490 helicase superfamily c-terminal domain AHML_13960 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AHML_13960 SM00091 PAS domain AHML_13960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_13995 SM00900 AHML_13995 AHML_14005 SM00478 endonuclease III AHML_14005 SM00525 AHML_14005 AHML_14020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_14025 SM00479 AHML_14025 AHML_14035 SM00487 DEAD-like helicases superfamily AHML_14035 SM00490 helicase superfamily c-terminal domain AHML_14060 SM00116 Domain in cystathionine beta-synthase and other proteins. AHML_14060 SM01091 Transporter associated domain AHML_14135 SM00267 diguanylate cyclase AHML_14140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_14215 SM00859 Semialdehyde dehydrogenase, NAD binding domain AHML_14225 SM00014 Acid phosphatase homologues AHML_14240 SM00342 helix_turn_helix, arabinose operon control protein AHML_14240 SM00871 Bacterial transcription activator, effector binding domain AHML_14270 SM01217 AHML_14270 AHML_14275 SM00342 helix_turn_helix, arabinose operon control protein AHML_14325 SM00052 Putative diguanylate phosphodiesterase AHML_14325 SM00267 diguanylate cyclase AHML_14345 SM00382 ATPases associated with a variety of cellular activities AHML_14350 SM00729 Elongator protein 3, MiaB family, Radical SAM AHML_14365 SM00382 ATPases associated with a variety of cellular activities AHML_14375 SM00062 Bacterial periplasmic substrate-binding proteins AHML_14390 SM00422 helix_turn_helix, mercury resistance AHML_14405 SM01351 AHML_14405 AHML_14415 SM00487 DEAD-like helicases superfamily AHML_14415 SM00490 helicase superfamily c-terminal domain AHML_14430 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AHML_14450 SM00917 LeuA allosteric (dimerisation) domain AHML_14455 SM00851 MGS-like domain AHML_14455 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AHML_14460 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AHML_14510 SM00382 ATPases associated with a variety of cellular activities AHML_14520 SM00062 Bacterial periplasmic substrate-binding proteins AHML_14530 SM00382 ATPases associated with a variety of cellular activities AHML_14555 SM00899 AHML_14555 AHML_14585 SM00062 Bacterial periplasmic substrate-binding proteins AHML_14590 SM00062 Bacterial periplasmic substrate-binding proteins AHML_14595 SM00267 diguanylate cyclase AHML_14610 SM00840 AHML_14610 AHML_14755 SM00382 ATPases associated with a variety of cellular activities AHML_14835 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AHML_14835 SM00465 GIY-YIG type nucleases (URI domain) AHML_14840 SM00421 helix_turn_helix, Lux Regulon AHML_14840 SM00448 cheY-homologous receiver domain AHML_14860 SM00382 ATPases associated with a variety of cellular activities AHML_14865 SM00849 Metallo-beta-lactamase superfamily AHML_14875 SM00530 Helix-turn-helix XRE-family like proteins AHML_14900 SM00528 Domain in histone-like proteins of HNS family AHML_14935 SM00344 helix_turn_helix ASNC type AHML_14945 SM01130 AHML_14945 AHML_14950 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHML_15030 SM00491 AHML_15030 AHML_15055 SM00098 Alkaline phosphatase homologues AHML_15060 SM00098 Alkaline phosphatase homologues AHML_15085 SM00421 helix_turn_helix, Lux Regulon AHML_15085 SM00448 cheY-homologous receiver domain AHML_15090 SM00387 Histidine kinase-like ATPases AHML_15100 SM00267 diguanylate cyclase AHML_15105 SM00062 Bacterial periplasmic substrate-binding proteins AHML_15105 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AHML_15115 SM00382 ATPases associated with a variety of cellular activities AHML_15145 SM01091 Transporter associated domain AHML_15155 SM00382 ATPases associated with a variety of cellular activities AHML_15215 SM00382 ATPases associated with a variety of cellular activities AHML_15215 SM00448 cheY-homologous receiver domain AHML_15220 SM00091 PAS domain AHML_15220 SM00387 Histidine kinase-like ATPases AHML_15220 SM00388 His Kinase A (phosphoacceptor) domain AHML_15225 SM00382 ATPases associated with a variety of cellular activities AHML_15250 SM00116 Domain in cystathionine beta-synthase and other proteins. AHML_15250 SM00924 MgtE intracellular N domain AHML_15265 SM00047 Lysozyme subfamily 2 AHML_15310 SM00138 Methyltransferase, chemotaxis proteins AHML_15315 SM00260 Two component signalling adaptor domain AHML_15315 SM00448 cheY-homologous receiver domain AHML_15320 SM00858 AHML_15320 AHML_15350 SM00363 S4 RNA-binding domain AHML_15355 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AHML_15380 SM00420 helix_turn_helix, Deoxyribose operon repressor AHML_15380 SM01134 AHML_15380 AHML_15415 SM00357 Cold shock protein domain AHML_15425 SM00861 Transketolase, pyrimidine binding domain AHML_15450 SM00487 DEAD-like helicases superfamily AHML_15450 SM00490 helicase superfamily c-terminal domain AHML_15630 SM00363 S4 RNA-binding domain AHML_15650 SM00481 DNA polymerase alpha chain like domain AHML_15705 SM00247 Beta/gamma crystallins AHML_15785 SM00530 Helix-turn-helix XRE-family like proteins AHML_15870 SM00448 cheY-homologous receiver domain AHML_15870 SM00862 Transcriptional regulatory protein, C terminal AHML_15885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_15885 SM00387 Histidine kinase-like ATPases AHML_15885 SM00388 His Kinase A (phosphoacceptor) domain AHML_15885 SM00448 cheY-homologous receiver domain AHML_15965 SM00028 Tetratricopeptide repeats AHML_15965 SM00448 cheY-homologous receiver domain AHML_16025 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AHML_16025 SM00091 PAS domain AHML_16025 SM00267 diguanylate cyclase AHML_16050 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AHML_16070 SM00354 helix_turn _helix lactose operon repressor AHML_16075 SM00640 Glycosyl hydrolases family 32 AHML_16095 SM00271 DnaJ molecular chaperone homology domain AHML_16125 SM01131 AHML_16125 AHML_16140 SM00382 ATPases associated with a variety of cellular activities AHML_16160 SM00528 Domain in histone-like proteins of HNS family AHML_16180 SM00530 Helix-turn-helix XRE-family like proteins AHML_16230 SM00062 Bacterial periplasmic substrate-binding proteins AHML_16230 SM00387 Histidine kinase-like ATPases AHML_16230 SM00388 His Kinase A (phosphoacceptor) domain AHML_16230 SM00448 cheY-homologous receiver domain AHML_16230 SM00918 Ligated ion channel L-glutamate- and glycine-binding site AHML_16260 SM00382 ATPases associated with a variety of cellular activities AHML_16325 SM00448 cheY-homologous receiver domain AHML_16325 SM00862 Transcriptional regulatory protein, C terminal AHML_16330 SM00382 ATPases associated with a variety of cellular activities AHML_16335 SM00382 ATPases associated with a variety of cellular activities AHML_16370 SM00382 ATPases associated with a variety of cellular activities AHML_16395 SM00267 diguanylate cyclase AHML_16495 SM00919 Malic enzyme, NAD binding domain AHML_16495 SM01274 AHML_16495 AHML_16500 SM00387 Histidine kinase-like ATPases AHML_16500 SM00448 cheY-homologous receiver domain AHML_16515 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AHML_16560 SM00387 Histidine kinase-like ATPases AHML_16560 SM00388 His Kinase A (phosphoacceptor) domain AHML_16565 SM00382 ATPases associated with a variety of cellular activities AHML_16565 SM00448 cheY-homologous receiver domain AHML_16580 SM00382 ATPases associated with a variety of cellular activities AHML_16590 SM00852 Probable molybdopterin binding domain AHML_16600 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AHML_16610 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AHML_16610 SM00091 PAS domain AHML_16610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_16650 SM00091 PAS domain AHML_16650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_16650 SM00387 Histidine kinase-like ATPases AHML_16650 SM00388 His Kinase A (phosphoacceptor) domain AHML_16650 SM00448 cheY-homologous receiver domain AHML_16670 SM00382 ATPases associated with a variety of cellular activities AHML_16675 SM00382 ATPases associated with a variety of cellular activities AHML_16710 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AHML_16710 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AHML_16710 SM00493 AHML_16710 AHML_16755 SM00788 Adenylosuccinate synthetase AHML_16765 SM00342 helix_turn_helix, arabinose operon control protein AHML_16775 SM00363 S4 RNA-binding domain AHML_16805 SM00052 Putative diguanylate phosphodiesterase AHML_16810 SM00862 Transcriptional regulatory protein, C terminal AHML_16815 SM00861 Transketolase, pyrimidine binding domain AHML_16825 SM00731 SprT homologues. AHML_16845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_16855 SM00732 Likely ribonuclease with RNase H fold. AHML_16880 SM00460 Transglutaminase/protease-like homologues AHML_16905 SM00986 Uracil DNA glycosylase superfamily AHML_16905 SM00987 UreE urease accessory protein, C-terminal domain AHML_16940 SM00937 AHML_16940 AHML_16960 SM01400 AHML_16960 AHML_16995 SM00100 Cyclic nucleotide-monophosphate binding domain AHML_17000 SM01022 AHML_17000 AHML_17010 SM00642 Alpha-amylase domain AHML_17020 SM00890 Domain of unknown function AHML_17035 SM01150 AHML_17035 AHML_17100 SM00965 Secretin and TonB N terminus short domain AHML_17120 SM00842 Cell division protein FtsA AHML_17135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_17135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_17145 SM00849 Metallo-beta-lactamase superfamily AHML_17185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_17185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_17245 SM01236 AHML_17245 AHML_17250 SM00822 AHML_17250 AHML_17260 SM00448 cheY-homologous receiver domain AHML_17260 SM00862 Transcriptional regulatory protein, C terminal AHML_17265 SM00387 Histidine kinase-like ATPases AHML_17265 SM00388 His Kinase A (phosphoacceptor) domain AHML_17275 SM01240 AHML_17275 AHML_17285 SM00841 Elongation factor P, C-terminal AHML_17285 SM01185 AHML_17285 AHML_17310 SM00267 diguanylate cyclase AHML_17335 SM00267 diguanylate cyclase AHML_17340 SM00357 Cold shock protein domain AHML_17355 SM00729 Elongator protein 3, MiaB family, Radical SAM AHML_17370 SM00116 Domain in cystathionine beta-synthase and other proteins. AHML_17370 SM01091 Transporter associated domain AHML_17440 SM00936 Penicillin-binding protein 5, C-terminal domain AHML_17455 SM00729 Elongator protein 3, MiaB family, Radical SAM AHML_17490 SM00422 helix_turn_helix, mercury resistance AHML_17565 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AHML_17580 SM00387 Histidine kinase-like ATPases AHML_17580 SM00388 His Kinase A (phosphoacceptor) domain AHML_17585 SM00421 helix_turn_helix, Lux Regulon AHML_17585 SM00448 cheY-homologous receiver domain AHML_17590 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AHML_17595 SM00448 cheY-homologous receiver domain AHML_17595 SM00850 LytTr DNA-binding domain AHML_17625 SM00267 diguanylate cyclase AHML_17640 SM00316 Ribosomal protein S1-like RNA-binding domain AHML_17640 SM00322 K homology RNA-binding domain AHML_17645 SM01387 AHML_17645 AHML_17665 SM00316 Ribosomal protein S1-like RNA-binding domain AHML_17695 SM00382 ATPases associated with a variety of cellular activities AHML_17705 SM01103 AHML_17705 AHML_17740 SM00861 Transketolase, pyrimidine binding domain AHML_17760 SM00382 ATPases associated with a variety of cellular activities AHML_17785 SM00020 Trypsin-like serine protease AHML_17860 SM00052 Putative diguanylate phosphodiesterase AHML_17860 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AHML_17860 SM00091 PAS domain AHML_17860 SM00267 diguanylate cyclase AHML_17890 SM00878 Biotin carboxylase C-terminal domain AHML_17915 SM00829 Enoylreductase AHML_17930 SM01266 AHML_17930 AHML_17960 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AHML_17970 SM00870 AHML_17970 AHML_17980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_17980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_17985 SM00937 AHML_17985 AHML_18025 SM00382 ATPases associated with a variety of cellular activities AHML_18050 SM00852 Probable molybdopterin binding domain AHML_18060 SM00825 Beta-ketoacyl synthase AHML_18065 SM00822 AHML_18065 AHML_18075 SM00825 Beta-ketoacyl synthase AHML_18135 SM00563 Phosphate acyltransferases AHML_18160 SM00477 DNA/RNA non-specific endonuclease AHML_18160 SM00892 DNA/RNA non-specific endonuclease AHML_18170 SM01057 Eukaryotic-type carbonic anhydrase AHML_18195 SM00382 ATPases associated with a variety of cellular activities AHML_18210 SM01012 AHML_18210 AHML_18220 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AHML_18250 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AHML_18280 SM00382 ATPases associated with a variety of cellular activities AHML_18285 SM00382 ATPases associated with a variety of cellular activities AHML_18335 SM00028 Tetratricopeptide repeats AHML_18340 SM00495 Chitin-binding domain type 3 AHML_18340 SM00636 AHML_18340 AHML_18365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_18365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_18375 SM00357 Cold shock protein domain AHML_18385 SM00479 AHML_18385 AHML_18420 SM00052 Putative diguanylate phosphodiesterase AHML_18420 SM00091 PAS domain AHML_18420 SM00267 diguanylate cyclase AHML_18445 SM00382 ATPases associated with a variety of cellular activities AHML_18460 SM00450 Rhodanese Homology Domain AHML_18490 SM00052 Putative diguanylate phosphodiesterase AHML_18505 SM00382 ATPases associated with a variety of cellular activities AHML_18515 SM00260 Two component signalling adaptor domain AHML_18515 SM00448 cheY-homologous receiver domain AHML_18520 SM00327 von Willebrand factor (vWF) type A domain AHML_18555 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AHML_18570 SM00448 cheY-homologous receiver domain AHML_18580 SM00382 ATPases associated with a variety of cellular activities AHML_18655 SM00014 Acid phosphatase homologues AHML_18665 SM00448 cheY-homologous receiver domain AHML_18665 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AHML_18695 SM00487 DEAD-like helicases superfamily AHML_18695 SM00490 helicase superfamily c-terminal domain AHML_18695 SM00847 Helicase associated domain (HA2) Add an annotation AHML_18740 SM00450 Rhodanese Homology Domain AHML_18770 SM00382 ATPases associated with a variety of cellular activities AHML_18825 SM00382 ATPases associated with a variety of cellular activities AHML_18845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_18890 SM00244 prohibitin homologues AHML_18900 SM00116 Domain in cystathionine beta-synthase and other proteins. AHML_18905 SM00382 ATPases associated with a variety of cellular activities AHML_19005 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHML_19070 SM00344 helix_turn_helix ASNC type AHML_19085 SM00347 helix_turn_helix multiple antibiotic resistance protein AHML_19095 SM00829 Enoylreductase AHML_19115 SM00642 Alpha-amylase domain AHML_19120 SM00642 Alpha-amylase domain AHML_19130 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AHML_19145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_19145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_19205 SM00382 ATPases associated with a variety of cellular activities AHML_19210 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AHML_19215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_19215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_19275 SM01152 AHML_19275 AHML_19295 SM00382 ATPases associated with a variety of cellular activities AHML_19310 SM00487 DEAD-like helicases superfamily AHML_19310 SM00490 helicase superfamily c-terminal domain AHML_19360 SM00411 bacterial (prokaryotic) histone like domain AHML_19375 SM00382 ATPases associated with a variety of cellular activities AHML_19400 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AHML_19400 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AHML_19400 SM00091 PAS domain AHML_19400 SM00267 diguanylate cyclase AHML_19415 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AHML_19420 SM01133 AHML_19420 AHML_19490 SM00530 Helix-turn-helix XRE-family like proteins AHML_19705 SM01091 Transporter associated domain AHML_19730 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AHML_19740 SM00382 ATPases associated with a variety of cellular activities AHML_19770 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AHML_19770 SM00534 ATPase domain of DNA mismatch repair MUTS family AHML_19785 SM00347 helix_turn_helix multiple antibiotic resistance protein AHML_19825 SM00382 ATPases associated with a variety of cellular activities AHML_19850 SM00986 Uracil DNA glycosylase superfamily AHML_19850 SM00987 UreE urease accessory protein, C-terminal domain AHML_19885 SM00563 Phosphate acyltransferases AHML_19915 SM00271 DnaJ molecular chaperone homology domain AHML_19950 SM00434 DNA Topoisomerase IV AHML_19955 SM00387 Histidine kinase-like ATPases AHML_19955 SM00433 TopoisomeraseII AHML_20055 SM00450 Rhodanese Homology Domain AHML_20065 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHML_20095 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AHML_20105 SM00382 ATPases associated with a variety of cellular activities AHML_20115 SM00478 endonuclease III AHML_20115 SM00525 AHML_20115 AHML_20140 SM00062 Bacterial periplasmic substrate-binding proteins AHML_20180 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AHML_20180 SM00267 diguanylate cyclase AHML_20185 SM01130 AHML_20185 AHML_20230 SM00382 ATPases associated with a variety of cellular activities AHML_20260 SM00344 helix_turn_helix ASNC type AHML_20265 SM01266 AHML_20265 AHML_20270 SM00642 Alpha-amylase domain AHML_20280 SM00354 helix_turn _helix lactose operon repressor AHML_20295 SM00870 AHML_20295 AHML_20310 SM00851 MGS-like domain AHML_20345 SM00260 Two component signalling adaptor domain AHML_20345 SM00448 cheY-homologous receiver domain AHML_20370 SM01207 AHML_20370 AHML_20375 SM00905 Dihydroneopterin aldolase AHML_20395 SM00833 Cobalamin synthesis protein cobW C-terminal domain AHML_20440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_20440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_20445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_20455 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AHML_20455 SM00267 diguanylate cyclase AHML_20475 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHML_20475 SM00895 AHML_20475 AHML_20480 SM00644 AHML_20480 AHML_20545 SM00957 SecA DEAD-like domain AHML_20545 SM00958 SecA preprotein cross-linking domain AHML_20560 SM00864 Tubulin/FtsZ family, GTPase domain AHML_20560 SM00865 Tubulin/FtsZ family, C-terminal domain AHML_20565 SM00842 Cell division protein FtsA AHML_20650 SM00749 bacterial OsmY and nodulation domain AHML_20705 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AHML_20710 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AHML_20785 SM00382 ATPases associated with a variety of cellular activities AHML_20805 SM00116 Domain in cystathionine beta-synthase and other proteins. AHML_20810 SM00382 ATPases associated with a variety of cellular activities AHML_20870 SM00530 Helix-turn-helix XRE-family like proteins AHML_20900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_20900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_20925 SM00421 helix_turn_helix, Lux Regulon AHML_20935 SM00062 Bacterial periplasmic substrate-binding proteins AHML_20955 SM00357 Cold shock protein domain AHML_20965 SM00062 Bacterial periplasmic substrate-binding proteins AHML_20965 SM00267 diguanylate cyclase AHML_20970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_20970 SM00387 Histidine kinase-like ATPases AHML_20970 SM00388 His Kinase A (phosphoacceptor) domain AHML_20975 SM00448 cheY-homologous receiver domain AHML_20975 SM00862 Transcriptional regulatory protein, C terminal AHML_20995 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AHML_20995 SM00091 PAS domain AHML_20995 SM00267 diguanylate cyclase AHML_21000 SM00342 helix_turn_helix, arabinose operon control protein AHML_21050 SM00530 Helix-turn-helix XRE-family like proteins AHML_21055 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHML_21055 SM00866 AHML_21055 AHML_21080 SM00382 ATPases associated with a variety of cellular activities AHML_21090 SM00267 diguanylate cyclase AHML_21105 SM00342 helix_turn_helix, arabinose operon control protein AHML_21105 SM00871 Bacterial transcription activator, effector binding domain AHML_21115 SM01060 AHML_21115 AHML_21140 SM00014 Acid phosphatase homologues AHML_21150 SM00822 AHML_21150 AHML_21165 SM00091 PAS domain AHML_21180 SM01120 AHML_21180 AHML_21210 SM00838 Elongation factor G C-terminus AHML_21210 SM00889 Elongation factor G, domain IV AHML_21250 SM01126 AHML_21250 AHML_21255 SM00663 RNA polymerase I subunit A N-terminus AHML_21280 SM00649 Ribosomal protein L11/L12 AHML_21285 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AHML_21285 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AHML_21325 SM00342 helix_turn_helix, arabinose operon control protein AHML_21340 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AHML_21340 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AHML_21340 SM00493 AHML_21340 AHML_21360 SM00387 Histidine kinase-like ATPases AHML_21365 SM00448 cheY-homologous receiver domain AHML_21365 SM00862 Transcriptional regulatory protein, C terminal AHML_21395 SM00382 ATPases associated with a variety of cellular activities AHML_21395 SM00448 cheY-homologous receiver domain AHML_21405 SM00387 Histidine kinase-like ATPases AHML_21405 SM00388 His Kinase A (phosphoacceptor) domain AHML_21420 SM00116 Domain in cystathionine beta-synthase and other proteins. AHML_21430 SM00062 Bacterial periplasmic substrate-binding proteins AHML_21435 SM00344 helix_turn_helix ASNC type AHML_21445 SM00849 Metallo-beta-lactamase superfamily AHML_21450 SM00382 ATPases associated with a variety of cellular activities AHML_21450 SM01086 C-terminal, D2-small domain, of ClpB protein AHML_21460 SM00363 S4 RNA-binding domain AHML_21500 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AHML_21500 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AHML_21510 SM00342 helix_turn_helix, arabinose operon control protein AHML_21520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_21520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_21585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_21585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_21595 SM00382 ATPases associated with a variety of cellular activities AHML_21605 SM01038 Beta galactosidase small chain AHML_21610 SM00354 helix_turn _helix lactose operon repressor AHML_21655 SM00464 Found in ATP-dependent protease La (LON) AHML_21660 SM00836 DALR anticodon binding domain AHML_21660 SM01016 Arginyl tRNA synthetase N terminal dom AHML_21675 SM00382 ATPases associated with a variety of cellular activities AHML_21675 SM01086 C-terminal, D2-small domain, of ClpB protein AHML_21715 SM00924 MgtE intracellular N domain AHML_21720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHML_21720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_21720 SM01358 AHML_21720 AHML_21750 SM00341 Helicase and RNase D C-terminal AHML_21750 SM00487 DEAD-like helicases superfamily AHML_21750 SM00490 helicase superfamily c-terminal domain AHML_21750 SM00956 AHML_21750 AHML_21780 SM00382 ATPases associated with a variety of cellular activities AHML_21800 SM01230 AHML_21800 AHML_21845 SM00642 Alpha-amylase domain AHML_21865 SM00448 cheY-homologous receiver domain AHML_21865 SM00862 Transcriptional regulatory protein, C terminal AHML_21870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHML_21870 SM00387 Histidine kinase-like ATPases AHML_21870 SM00388 His Kinase A (phosphoacceptor) domain AHML_21880 SM00919 Malic enzyme, NAD binding domain AHML_21880 SM01274 AHML_21880 AHML_21895 SM00487 DEAD-like helicases superfamily AHML_21895 SM00490 helicase superfamily c-terminal domain AHML_21935 SM00382 ATPases associated with a variety of cellular activities AHML_21940 SM00563 Phosphate acyltransferases AHML_21945 SM00563 Phosphate acyltransferases AHML_21970 SM00062 Bacterial periplasmic substrate-binding proteins AHML_21975 SM00382 ATPases associated with a variety of cellular activities AHML_22005 SM00267 diguanylate cyclase AHML_22010 SM00422 helix_turn_helix, mercury resistance AHML_22080 SM00829 Enoylreductase AHML_22090 SM00052 Putative diguanylate phosphodiesterase AHML_22090 SM00267 diguanylate cyclase AHML_22145 SM00421 helix_turn_helix, Lux Regulon AHML_22155 SM00420 helix_turn_helix, Deoxyribose operon repressor AHML_22155 SM01134 AHML_22155 AHML_22160 SM00448 cheY-homologous receiver domain AHML_22160 SM00862 Transcriptional regulatory protein, C terminal AHML_22165 SM00387 Histidine kinase-like ATPases AHML_22165 SM00388 His Kinase A (phosphoacceptor) domain AHML_22190 SM00382 ATPases associated with a variety of cellular activities AHML_22230 SM00470 ParB-like nuclease domain AHML_22245 SM01228 AHML_22245 AHML_22260 SM00382 ATPases associated with a variety of cellular activities AHML_22265 SM00382 ATPases associated with a variety of cellular activities AHML_22290 SM01234 AHML_22290 AHML_22305 SM00382 ATPases associated with a variety of cellular activities AHML_22315 SM00062 Bacterial periplasmic substrate-binding proteins AHML_22315 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins.