locus-tag class description U876_00005 PF00308 Bacterial dnaA protein U876_00005 PF08299 Bacterial dnaA protein helix-turn-helix U876_00005 PF11638 DnaA N-terminal domain U876_00010 PF02767 DNA polymerase III beta subunit, central domain U876_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain U876_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain U876_00015 PF02463 RecF/RecN/SMC N terminal domain U876_00020 PF01751 Toprim domain U876_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_00020 PF00204 DNA gyrase B U876_00020 PF00986 DNA gyrase B subunit, carboxyl terminus U876_00020 PF18053 DNA gyrase B subunit insert domain U876_00030 PF13280 WYL domain U876_00030 PF08279 HTH domain U876_00035 PF00011 Hsp20/alpha crystallin family U876_00040 PF00011 Hsp20/alpha crystallin family U876_00045 PF00155 Aminotransferase class I and II U876_00060 PF07690 Major Facilitator Superfamily U876_00065 PF00072 Response regulator receiver domain U876_00065 PF00486 Transcriptional regulatory protein, C terminal U876_00070 PF13492 GAF domain U876_00070 PF00512 His Kinase A (phospho-acceptor) domain U876_00070 PF02702 Osmosensitive K+ channel His kinase sensor domain U876_00070 PF13493 Domain of unknown function (DUF4118) U876_00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_00075 PF02669 K+-transporting ATPase, c chain U876_00090 PF03814 Potassium-transporting ATPase A subunit U876_00095 PF07992 Pyridine nucleotide-disulphide oxidoreductase U876_00095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain U876_00100 PF00512 His Kinase A (phospho-acceptor) domain U876_00100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_00100 PF00497 Bacterial extracellular solute-binding proteins, family 3 U876_00105 PF00873 AcrB/AcrD/AcrF family U876_00110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion U876_00115 PF00440 Bacterial regulatory proteins, tetR family U876_00145 PF02887 Pyruvate kinase, alpha/beta domain U876_00145 PF00224 Pyruvate kinase, barrel domain U876_00150 PF07690 Major Facilitator Superfamily U876_00160 PF00672 HAMP domain U876_00160 PF00512 His Kinase A (phospho-acceptor) domain U876_00160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_00165 PF14532 Sigma-54 interaction domain U876_00165 PF00072 Response regulator receiver domain U876_00165 PF02954 Bacterial regulatory protein, Fis family U876_00180 PF12146 Serine aminopeptidase, S33 U876_00185 PF00132 Bacterial transferase hexapeptide (six repeats) U876_00195 PF13291 ACT domain U876_00195 PF04607 Region found in RelA / SpoT proteins U876_00195 PF02824 TGS domain U876_00200 PF01192 RNA polymerase Rpb6 U876_00205 PF00625 Guanylate kinase U876_00210 PF01075 Glycosyltransferase family 9 (heptosyltransferase) U876_00225 PF00892 EamA-like transporter family U876_00245 PF03466 LysR substrate binding domain U876_00245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_00250 PF00579 tRNA synthetases class I (W and Y) U876_00255 PF00582 Universal stress protein family U876_00260 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase U876_00260 PF07055 Enoyl reductase FAD binding domain U876_00260 PF12241 Trans-2-enoyl-CoA reductase catalytic region U876_00265 PF00990 Diguanylate cyclase, GGDEF domain U876_00270 PF00210 Ferritin-like domain U876_00280 PF07690 Major Facilitator Superfamily U876_00285 PF01810 LysE type translocator U876_00300 PF15976 CS1-pili formation C-terminal U876_00300 PF16967 E-set like domain U876_00305 PF18649 EcpB C-terminal domain U876_00310 PF16449 Fimbrillin MatB U876_00315 PF00196 Bacterial regulatory proteins, luxR family U876_00315 PF00072 Response regulator receiver domain U876_00320 PF00512 His Kinase A (phospho-acceptor) domain U876_00320 PF01627 Hpt domain U876_00320 PF00497 Bacterial extracellular solute-binding proteins, family 3 U876_00320 PF00989 PAS fold U876_00320 PF00072 Response regulator receiver domain U876_00320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_00330 PF06580 Histidine kinase U876_00330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_00330 PF07694 5TMR of 5TMR-LYT U876_00335 PF00072 Response regulator receiver domain U876_00335 PF04397 LytTr DNA-binding domain U876_00340 PF07690 Major Facilitator Superfamily U876_00345 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain U876_00345 PF02222 ATP-grasp domain U876_00350 PF00731 AIR carboxylase U876_00365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_00365 PF03466 LysR substrate binding domain U876_00370 PF07715 TonB-dependent Receptor Plug Domain U876_00370 PF00593 TonB dependent receptor U876_00375 PF01177 Asp/Glu/Hydantoin racemase U876_00410 PF00899 ThiF family U876_00415 PF02657 Fe-S metabolism associated domain U876_00420 PF00266 Aminotransferase class-V U876_00425 PF00580 UvrD/REP helicase N-terminal domain U876_00425 PF13361 UvrD-like helicase C-terminal domain U876_00430 PF03707 Bacterial signalling protein N terminal repeat U876_00430 PF00990 Diguanylate cyclase, GGDEF domain U876_00430 PF00563 EAL domain U876_00435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III U876_00440 PF00107 Zinc-binding dehydrogenase U876_00440 PF08240 Alcohol dehydrogenase GroES-like domain U876_00445 PF00155 Aminotransferase class I and II U876_00450 PF00440 Bacterial regulatory proteins, tetR family U876_00450 PF08360 QacR-like protein, C-terminal region U876_00455 PF01370 NAD dependent epimerase/dehydratase family U876_00470 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) U876_00490 PF03755 YicC-like family, N-terminal region U876_00490 PF08340 Domain of unknown function (DUF1732) U876_00495 PF03725 3' exoribonuclease family, domain 2 U876_00495 PF01138 3' exoribonuclease family, domain 1 U876_00500 PF00156 Phosphoribosyl transferase domain U876_00510 PF00403 Heavy-metal-associated domain U876_00515 PF09278 MerR, DNA binding U876_00515 PF00376 MerR family regulatory protein U876_00520 PF00360 Phytochrome region U876_00520 PF00990 Diguanylate cyclase, GGDEF domain U876_00520 PF01590 GAF domain U876_00520 PF00563 EAL domain U876_00525 PF06288 Protein of unknown function (DUF1040) U876_00530 PF13746 4Fe-4S dicluster domain U876_00530 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase U876_00530 PF12801 4Fe-4S binding domain U876_00535 PF01636 Phosphotransferase enzyme family U876_00540 PF01323 DSBA-like thioredoxin domain U876_00545 PF00528 Binding-protein-dependent transport system inner membrane component U876_00550 PF00005 ABC transporter U876_00560 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family U876_00560 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain U876_00565 PF00857 Isochorismatase family U876_00575 PF04463 Protein of unknown function (DUF523) U876_00580 PF01553 Acyltransferase U876_00585 PF01553 Acyltransferase U876_00590 PF13335 Magnesium chelatase, subunit ChlI C-terminal U876_00590 PF01078 Magnesium chelatase, subunit ChlI U876_00595 PF00205 Thiamine pyrophosphate enzyme, central domain U876_00595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain U876_00595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain U876_00605 PF01063 Amino-transferase class IV U876_00610 PF00920 Dehydratase family U876_00615 PF00291 Pyridoxal-phosphate dependent enzyme U876_00615 PF00585 C-terminal regulatory domain of Threonine dehydratase U876_00620 PF00691 OmpA family U876_00620 PF01389 OmpA-like transmembrane domain U876_00630 PF17764 3′ DNA-binding domain (3′BD) U876_00630 PF00270 DEAD/DEAH box helicase U876_00630 PF00271 Helicase conserved C-terminal domain U876_00630 PF18319 PriA DNA helicase Cys-rich region (CRR) domain U876_00630 PF18074 Primosomal protein N C-terminal domain U876_00635 PF01197 Ribosomal protein L31 U876_00640 PF13460 NAD(P)H-binding U876_00640 PF11066 Protein of unknown function (DUF2867) U876_00645 PF00390 Malic enzyme, N-terminal domain U876_00645 PF03949 Malic enzyme, NAD binding domain U876_00655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_00655 PF00512 His Kinase A (phospho-acceptor) domain U876_00655 PF00672 HAMP domain U876_00660 PF00486 Transcriptional regulatory protein, C terminal U876_00660 PF00072 Response regulator receiver domain U876_00665 PF05958 tRNA (Uracil-5-)-methyltransferase U876_00680 PF00128 Alpha amylase, catalytic domain U876_00680 PF02903 Alpha amylase, N-terminal ig-like domain U876_00695 PF00012 Hsp70 protein U876_00700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain U876_00700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain U876_00705 PF05981 CreA protein U876_00720 PF01258 Prokaryotic dksA/traR C4-type zinc finger U876_00725 PF00120 Glutamine synthetase, catalytic domain U876_00730 PF00202 Aminotransferase class-III U876_00735 PF13416 Bacterial extracellular solute-binding protein U876_00740 PF13416 Bacterial extracellular solute-binding protein U876_00745 PF00005 ABC transporter U876_00745 PF08402 TOBE domain U876_00750 PF00528 Binding-protein-dependent transport system inner membrane component U876_00755 PF00528 Binding-protein-dependent transport system inner membrane component U876_00760 PF03475 3-alpha domain U876_00760 PF03473 MOSC domain U876_00775 PF03061 Thioesterase superfamily U876_00780 PF00270 DEAD/DEAH box helicase U876_00780 PF00570 HRDC domain U876_00780 PF09382 RQC domain U876_00780 PF16124 RecQ zinc-binding U876_00780 PF00271 Helicase conserved C-terminal domain U876_00785 PF00034 Cytochrome c U876_00790 PF02696 Uncharacterized ACR, YdiU/UPF0061 family U876_00800 PF02592 Putative vitamin uptake transporter U876_00805 PF03737 Aldolase/RraA U876_00810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_00810 PF00672 HAMP domain U876_00815 PF03448 MgtE intracellular N domain U876_00815 PF00571 CBS domain U876_00815 PF01769 Divalent cation transporter U876_00820 PF10414 Sirohaem synthase dimerisation region U876_00820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases U876_00820 PF14824 Sirohaem biosynthesis protein central U876_00825 PF01226 Formate/nitrite transporter U876_00830 PF13806 Rieske-like [2Fe-2S] domain U876_00840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain U876_00840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain U876_00840 PF07992 Pyridine nucleotide-disulphide oxidoreductase U876_00840 PF04324 BFD-like [2Fe-2S] binding domain U876_00840 PF18267 Rubredoxin NAD+ reductase C-terminal domain U876_00845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_00845 PF03466 LysR substrate binding domain U876_00850 PF07690 Major Facilitator Superfamily U876_00855 PF07724 AAA domain (Cdc48 subfamily) U876_00855 PF00004 ATPase family associated with various cellular activities (AAA) U876_00855 PF10431 C-terminal, D2-small domain, of ClpB protein U876_00860 PF00227 Proteasome subunit U876_00870 PF03485 Arginyl tRNA synthetase N terminal domain U876_00870 PF00750 tRNA synthetases class I (R) U876_00870 PF05746 DALR anticodon binding domain U876_00880 PF04545 Sigma-70, region 4 U876_00880 PF04542 Sigma-70 region 2 U876_00885 PF12973 ChrR Cupin-like domain U876_00890 PF02673 Bacitracin resistance protein BacA U876_00895 PF00248 Aldo/keto reductase family U876_00900 PF01263 Aldose 1-epimerase U876_00905 PF00288 GHMP kinases N terminal domain U876_00905 PF08544 GHMP kinases C terminal U876_00905 PF10509 Galactokinase galactose-binding signature U876_00910 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain U876_00910 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain U876_00915 PF16363 GDP-mannose 4,6 dehydratase U876_00920 PF00356 Bacterial regulatory proteins, lacI family U876_00925 PF16353 Domain of unknown function(DUF4981) U876_00925 PF00703 Glycosyl hydrolases family 2 U876_00925 PF02929 Beta galactosidase small chain U876_00925 PF02836 Glycosyl hydrolases family 2, TIM barrel domain U876_00925 PF02837 Glycosyl hydrolases family 2, sugar binding domain U876_00930 PF13407 Periplasmic binding protein domain U876_00935 PF00005 ABC transporter U876_00940 PF02653 Branched-chain amino acid transport system / permease component U876_00945 PF02743 Cache domain U876_00945 PF00672 HAMP domain U876_00945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_00970 PF00696 Amino acid kinase family U876_00975 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain U876_00975 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain U876_00980 PF03606 C4-dicarboxylate anaerobic carrier U876_00985 PF02863 Arginine repressor, C-terminal domain U876_00985 PF01316 Arginine repressor, DNA binding domain U876_00990 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain U876_00990 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain U876_00995 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain U876_00995 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain U876_01010 PF02666 Phosphatidylserine decarboxylase U876_01015 PF02743 Cache domain U876_01015 PF00672 HAMP domain U876_01015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_01020 PF08212 Lipocalin-like domain U876_01030 PF00465 Iron-containing alcohol dehydrogenase U876_01035 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch U876_01035 PF01262 Alanine dehydrogenase/PNT, C-terminal domain U876_01035 PF05222 Alanine dehydrogenase/PNT, N-terminal domain U876_01040 PF02233 NAD(P) transhydrogenase beta subunit U876_01050 PF08348 YheO-like PAS domain U876_01050 PF13309 HTH domain U876_01055 PF03313 Serine dehydratase alpha chain U876_01060 PF00375 Sodium:dicarboxylate symporter family U876_01065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain U876_01065 PF07992 Pyridine nucleotide-disulphide oxidoreductase U876_01070 PF13525 Outer membrane lipoprotein U876_01075 PF00849 RNA pseudouridylate synthase U876_01075 PF01479 S4 domain U876_01085 PF10431 C-terminal, D2-small domain, of ClpB protein U876_01085 PF17871 AAA lid domain U876_01085 PF02861 Clp amino terminal domain, pathogenicity island component U876_01085 PF07724 AAA domain (Cdc48 subfamily) U876_01085 PF00004 ATPase family associated with various cellular activities (AAA) U876_01095 PF03590 Aspartate-ammonia ligase U876_01100 PF01037 Lrp/AsnC ligand binding domain U876_01110 PF10063 Uncharacterized integral membrane protein (DUF2301) U876_01115 PF00571 CBS domain U876_01115 PF00478 IMP dehydrogenase / GMP reductase domain U876_01135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_01135 PF00512 His Kinase A (phospho-acceptor) domain U876_01145 PF00072 Response regulator receiver domain U876_01145 PF00158 Sigma-54 interaction domain U876_01150 PF06496 Protein of unknown function (DUF1097) U876_01160 PF00174 Oxidoreductase molybdopterin binding domain U876_01165 PF01794 Ferric reductase like transmembrane component U876_01180 PF00072 Response regulator receiver domain U876_01180 PF00486 Transcriptional regulatory protein, C terminal U876_01185 PF08918 PhoQ Sensor U876_01185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_01195 PF00384 Molybdopterin oxidoreductase U876_01195 PF18364 Molybdopterin oxidoreductase N-terminal domain U876_01195 PF01568 Molydopterin dinucleotide binding domain U876_01200 PF03264 NapC/NirT cytochrome c family, N-terminal region U876_01205 PF01751 Toprim domain U876_01205 PF01131 DNA topoisomerase U876_01220 PF12852 Cupin U876_01220 PF12833 Helix-turn-helix domain U876_01225 PF02386 Cation transport protein U876_01230 PF02080 TrkA-C domain U876_01230 PF02254 TrkA-N domain U876_01235 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain U876_01235 PF01565 FAD binding domain U876_01240 PF02237 Biotin protein ligase C terminal domain U876_01240 PF03099 Biotin/lipoate A/B protein ligase family U876_01240 PF08279 HTH domain U876_01245 PF00485 Phosphoribulokinase / Uridine kinase family U876_01260 PF03143 Elongation factor Tu C-terminal domain U876_01260 PF03144 Elongation factor Tu domain 2 U876_01260 PF00009 Elongation factor Tu GTP binding domain U876_01270 PF00584 SecE/Sec61-gamma subunits of protein translocation complex U876_01275 PF00467 KOW motif U876_01275 PF02357 Transcription termination factor nusG U876_01280 PF03946 Ribosomal protein L11, N-terminal domain U876_01280 PF00298 Ribosomal protein L11, RNA binding domain U876_01285 PF00687 Ribosomal protein L1p/L10e family U876_01290 PF00466 Ribosomal protein L10 U876_01295 PF00542 Ribosomal protein L7/L12 C-terminal domain U876_01295 PF16320 Ribosomal protein L7/L12 dimerisation domain U876_01300 PF04561 RNA polymerase Rpb2, domain 2 U876_01300 PF04563 RNA polymerase beta subunit U876_01300 PF04560 RNA polymerase Rpb2, domain 7 U876_01300 PF10385 RNA polymerase beta subunit external 1 domain U876_01300 PF00562 RNA polymerase Rpb2, domain 6 U876_01300 PF04565 RNA polymerase Rpb2, domain 3 U876_01305 PF04997 RNA polymerase Rpb1, domain 1 U876_01305 PF00623 RNA polymerase Rpb1, domain 2 U876_01305 PF04998 RNA polymerase Rpb1, domain 5 U876_01305 PF05000 RNA polymerase Rpb1, domain 4 U876_01305 PF04983 RNA polymerase Rpb1, domain 3 U876_01315 PF13309 HTH domain U876_01315 PF08348 YheO-like PAS domain U876_01320 PF01042 Endoribonuclease L-PSP U876_01325 PF02635 DsrE/DsrF-like family U876_01330 PF02635 DsrE/DsrF-like family U876_01335 PF04077 DsrH like protein U876_01340 PF00164 Ribosomal protein S12/S23 U876_01345 PF00177 Ribosomal protein S7p/S5e U876_01350 PF14492 Elongation Factor G, domain II U876_01350 PF03764 Elongation factor G, domain IV U876_01350 PF03144 Elongation factor Tu domain 2 U876_01350 PF00009 Elongation factor Tu GTP binding domain U876_01350 PF00679 Elongation factor G C-terminus U876_01355 PF00009 Elongation factor Tu GTP binding domain U876_01355 PF03144 Elongation factor Tu domain 2 U876_01355 PF03143 Elongation factor Tu C-terminal domain U876_01390 PF00860 Permease family U876_01395 PF02733 Dak1 domain U876_01400 PF02734 DAK2 domain U876_01405 PF00381 PTS HPr component phosphorylation site U876_01405 PF03610 PTS system fructose IIA component U876_01405 PF00391 PEP-utilising enzyme, mobile domain U876_01405 PF05524 PEP-utilising enzyme, N-terminal U876_01410 PF00465 Iron-containing alcohol dehydrogenase U876_01415 PF00158 Sigma-54 interaction domain U876_01415 PF02954 Bacterial regulatory protein, Fis family U876_01415 PF00989 PAS fold U876_01420 PF03466 LysR substrate binding domain U876_01420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_01425 PF04371 Porphyromonas-type peptidyl-arginine deiminase U876_01430 PF00106 short chain dehydrogenase U876_01435 PF01594 AI-2E family transporter U876_01440 PF00293 NUDIX domain U876_01465 PF00199 Catalase U876_01465 PF06628 Catalase-related immune-responsive U876_01470 PF00583 Acetyltransferase (GNAT) family U876_01490 PF17158 Membrane-associated sensor, integral membrane domain U876_01490 PF00990 Diguanylate cyclase, GGDEF domain U876_01500 PF00005 ABC transporter U876_01500 PF08402 TOBE domain U876_01510 PF00528 Binding-protein-dependent transport system inner membrane component U876_01525 PF00392 Bacterial regulatory proteins, gntR family U876_01525 PF07702 UTRA domain U876_01535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_01535 PF03466 LysR substrate binding domain U876_01545 PF17954 Quercetinase C-terminal cupin domain U876_01545 PF02678 Pirin U876_01550 PF07681 DoxX U876_01555 PF17946 RecC C-terminal domain U876_01560 PF12705 PD-(D/E)XK nuclease superfamily U876_01560 PF13361 UvrD-like helicase C-terminal domain U876_01560 PF00580 UvrD/REP helicase N-terminal domain U876_01565 PF13538 UvrD-like helicase C-terminal domain U876_01575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily U876_01585 PF17151 Periplasmic sensor domain U876_01585 PF00990 Diguanylate cyclase, GGDEF domain U876_01605 PF00486 Transcriptional regulatory protein, C terminal U876_01605 PF00072 Response regulator receiver domain U876_01610 PF00512 His Kinase A (phospho-acceptor) domain U876_01610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_01610 PF00672 HAMP domain U876_01615 PF01590 GAF domain U876_01615 PF00563 EAL domain U876_01615 PF00990 Diguanylate cyclase, GGDEF domain U876_01615 PF00360 Phytochrome region U876_01620 PF07715 TonB-dependent Receptor Plug Domain U876_01620 PF00593 TonB dependent receptor U876_01625 PF00313 'Cold-shock' DNA-binding domain U876_01635 PF16916 Dimerisation domain of Zinc Transporter U876_01635 PF01545 Cation efflux family U876_01650 PF00436 Single-strand binding protein family U876_01655 PF00196 Bacterial regulatory proteins, luxR family U876_01660 PF00005 ABC transporter U876_01660 PF17755 UvrA DNA-binding domain U876_01660 PF17760 UvrA interaction domain U876_01675 PF03922 OmpW family U876_01680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_01680 PF00672 HAMP domain U876_01700 PF02219 Methylenetetrahydrofolate reductase U876_01710 PF03594 Benzoate membrane transport protein U876_01715 PF01381 Helix-turn-helix U876_01715 PF07883 Cupin domain U876_01745 PF04363 Protein of unknown function (DUF496) U876_01755 PF04751 Protein of unknown function (DUF615) U876_01760 PF01523 Putative modulator of DNA gyrase U876_01765 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) U876_01770 PF01722 BolA-like protein U876_01780 PF05494 MlaC protein U876_01785 PF02470 MlaD protein U876_01790 PF02405 Permease MlaE U876_01795 PF00005 ABC transporter U876_01800 PF01380 SIS domain U876_01800 PF00571 CBS domain U876_01810 PF06835 Lipopolysaccharide-assembly, LptC-related U876_01815 PF03968 OstA-like protein U876_01820 PF12399 Branched-chain amino acid ATP-binding cassette transporter U876_01820 PF00005 ABC transporter U876_01825 PF00309 Sigma-54 factor, Activator interacting domain (AID) U876_01825 PF04552 Sigma-54, DNA binding domain U876_01825 PF04963 Sigma-54 factor, core binding domain U876_01830 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein U876_01835 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 U876_01840 PF03668 P-loop ATPase protein family U876_01845 PF00381 PTS HPr component phosphorylation site U876_01850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 U876_01850 PF00874 PRD domain U876_01850 PF05043 Mga helix-turn-helix domain U876_01850 PF08279 HTH domain U876_01855 PF07071 KDGP aldolase U876_01860 PF03841 L-seryl-tRNA selenium transferase U876_01865 PF01979 Amidohydrolase family U876_01895 PF13180 PDZ domain U876_01900 PF13180 PDZ domain U876_01900 PF00595 PDZ domain U876_01910 PF03969 AFG1-like ATPase U876_01915 PF00572 Ribosomal protein L13 U876_01920 PF00380 Ribosomal protein S9/S16 U876_01925 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal U876_01925 PF00355 Rieske [2Fe-2S] domain U876_01930 PF00033 Cytochrome b/b6/petB U876_01930 PF00032 Cytochrome b(C-terminal)/b6/petD U876_01935 PF02167 Cytochrome C1 family U876_01940 PF00043 Glutathione S-transferase, C-terminal domain U876_01940 PF02798 Glutathione S-transferase, N-terminal domain U876_01945 PF04386 Stringent starvation protein B U876_01950 PF04972 BON domain U876_01955 PF13580 SIS domain U876_01960 PF02021 Uncharacterised protein family UPF0102 U876_01965 PF04348 LppC putative lipoprotein U876_01970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases U876_01975 PF02381 MraZ protein, putative antitoxin-like U876_01980 PF01795 MraW methylase family U876_01985 PF04999 Cell division protein FtsL U876_01990 PF03717 Penicillin-binding Protein dimerisation domain U876_01990 PF00905 Penicillin binding protein transpeptidase domain U876_01995 PF01225 Mur ligase family, catalytic domain U876_01995 PF02875 Mur ligase family, glutamate ligase domain U876_01995 PF08245 Mur ligase middle domain U876_02000 PF08245 Mur ligase middle domain U876_02000 PF02875 Mur ligase family, glutamate ligase domain U876_02000 PF01225 Mur ligase family, catalytic domain U876_02005 PF00953 Glycosyl transferase family 4 U876_02005 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 U876_02010 PF02875 Mur ligase family, glutamate ligase domain U876_02010 PF08245 Mur ligase middle domain U876_02015 PF01098 Cell cycle protein U876_02020 PF03033 Glycosyltransferase family 28 N-terminal domain U876_02020 PF04101 Glycosyltransferase family 28 C-terminal domain U876_02025 PF08245 Mur ligase middle domain U876_02025 PF02875 Mur ligase family, glutamate ligase domain U876_02025 PF01225 Mur ligase family, catalytic domain U876_02030 PF08478 POTRA domain, FtsQ-type U876_02030 PF03799 Cell division protein FtsQ U876_02035 PF02491 SHS2 domain inserted in FTSA U876_02040 PF00091 Tubulin/FtsZ family, GTPase domain U876_02040 PF12327 FtsZ family, C-terminal domain U876_02045 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase U876_02055 PF02810 SEC-C motif U876_02055 PF07516 SecA Wing and Scaffold domain U876_02055 PF01043 SecA preprotein cross-linking domain U876_02055 PF07517 SecA DEAD-like domain U876_02065 PF00293 NUDIX domain U876_02070 PF03884 DNA gyrase inhibitor YacG U876_02075 PF07072 Cell division protein U876_02080 PF01121 Dephospho-CoA kinase U876_02085 PF06750 Bacterial Peptidase A24 N-terminal domain U876_02085 PF01478 Type IV leader peptidase family U876_02090 PF00482 Type II secretion system (T2SS), protein F U876_02095 PF00437 Type II/IV secretion system protein U876_02095 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain U876_02105 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain U876_02105 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain U876_02115 PF01510 N-acetylmuramoyl-L-alanine amidase U876_02120 PF00392 Bacterial regulatory proteins, gntR family U876_02120 PF07729 FCD domain U876_02125 PF17831 Pyruvate dehydrogenase E1 component middle domain U876_02125 PF00456 Transketolase, thiamine diphosphate binding domain U876_02130 PF02817 e3 binding domain U876_02130 PF00364 Biotin-requiring enzyme U876_02130 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) U876_02135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain U876_02135 PF07992 Pyridine nucleotide-disulphide oxidoreductase U876_02140 PF00563 EAL domain U876_02140 PF00990 Diguanylate cyclase, GGDEF domain U876_02140 PF05231 MASE1 U876_02140 PF08447 PAS fold U876_02140 PF08448 PAS fold U876_02140 PF13426 PAS domain U876_02150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_02150 PF00672 HAMP domain U876_02150 PF12729 Four helix bundle sensory module for signal transduction U876_02155 PF00672 HAMP domain U876_02155 PF12729 Four helix bundle sensory module for signal transduction U876_02155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_02160 PF01734 Patatin-like phospholipase U876_02165 PF00330 Aconitase family (aconitate hydratase) U876_02165 PF11791 Aconitate B N-terminal domain U876_02165 PF06434 Aconitate hydratase 2 N-terminus U876_02175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_02175 PF03466 LysR substrate binding domain U876_02180 PF01810 LysE type translocator U876_02190 PF02492 CobW/HypB/UreG, nucleotide-binding domain U876_02190 PF07683 Cobalamin synthesis protein cobW C-terminal domain U876_02195 PF07690 Major Facilitator Superfamily U876_02205 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) U876_02210 PF02152 Dihydroneopterin aldolase U876_02215 PF02660 Glycerol-3-phosphate acyltransferase U876_02260 PF00072 Response regulator receiver domain U876_02260 PF01584 CheW-like domain U876_02265 PF00106 short chain dehydrogenase U876_02270 PF17176 tRNA-binding domain U876_02270 PF05127 Helicase U876_02270 PF13718 GNAT acetyltransferase 2 U876_02270 PF08351 Domain of unknown function (DUF1726) U876_02285 PF00210 Ferritin-like domain U876_02295 PF02142 MGS-like domain U876_02310 PF17763 Glutaminase/Asparaginase C-terminal domain U876_02310 PF00710 Asparaginase, N-terminal U876_02325 PF00356 Bacterial regulatory proteins, lacI family U876_02330 PF00367 phosphotransferase system, EIIB U876_02330 PF02378 Phosphotransferase system, EIIC U876_02335 PF00128 Alpha amylase, catalytic domain U876_02335 PF11941 Domain of unknown function (DUF3459) U876_02340 PF12464 Maltose acetyltransferase U876_02340 PF14602 Hexapeptide repeat of succinyl-transferase U876_02345 PF01037 Lrp/AsnC ligand binding domain U876_02350 PF00892 EamA-like transporter family U876_02360 PF00171 Aldehyde dehydrogenase family U876_02365 PF00528 Binding-protein-dependent transport system inner membrane component U876_02370 PF00528 Binding-protein-dependent transport system inner membrane component U876_02375 PF00005 ABC transporter U876_02375 PF08402 TOBE domain U876_02380 PF13416 Bacterial extracellular solute-binding protein U876_02385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_02385 PF03466 LysR substrate binding domain U876_02390 PF03553 Na+/H+ antiporter family U876_02430 PF08323 Starch synthase catalytic domain U876_02430 PF00534 Glycosyl transferases group 1 U876_02435 PF00483 Nucleotidyl transferase U876_02440 PF08468 Methyltransferase small domain N-terminal U876_02440 PF05175 Methyltransferase small domain U876_02445 PF00701 Dihydrodipicolinate synthetase family U876_02450 PF01590 GAF domain U876_02450 PF00990 Diguanylate cyclase, GGDEF domain U876_02450 PF00360 Phytochrome region U876_02450 PF00563 EAL domain U876_02460 PF13419 Haloacid dehalogenase-like hydrolase U876_02465 PF17209 Hfq protein U876_02470 PF04403 Paraquat-inducible protein A U876_02475 PF02470 MlaD protein U876_02480 PF03886 ABC-type transport auxiliary lipoprotein component U876_02485 PF01389 OmpA-like transmembrane domain U876_02485 PF00691 OmpA family U876_02495 PF00657 GDSL-like Lipase/Acylhydrolase U876_02500 PF04076 Bacterial OB fold (BOF) protein U876_02505 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain U876_02505 PF01464 Transglycosylase SLT domain U876_02510 PF04362 Bacterial Fe(2+) trafficking U876_02515 PF00730 HhH-GPD superfamily base excision DNA repair protein U876_02515 PF10576 Iron-sulfur binding domain of endonuclease III U876_02515 PF00633 Helix-hairpin-helix motif U876_02515 PF14815 NUDIX domain U876_02520 PF16537 Type II secretion system protein B U876_02525 PF01471 Putative peptidoglycan binding domain U876_02525 PF13401 AAA domain U876_02535 PF12627 Probable RNA and SrmB- binding site of polymerase A U876_02535 PF01966 HD domain U876_02535 PF01743 Poly A polymerase head domain U876_02550 PF04172 LrgB-like family U876_02555 PF03788 LrgA family U876_02560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_02560 PF03466 LysR substrate binding domain U876_02565 PF00155 Aminotransferase class I and II U876_02565 PF00392 Bacterial regulatory proteins, gntR family U876_02585 PF04073 Aminoacyl-tRNA editing domain U876_02590 PF01384 Phosphate transporter family U876_02595 PF01865 Protein of unknown function DUF47 U876_02610 PF03279 Bacterial lipid A biosynthesis acyltransferase U876_02615 PF00294 pfkB family carbohydrate kinase U876_02615 PF01467 Cytidylyltransferase-like U876_02620 PF02321 Outer membrane efflux protein U876_02625 PF00293 NUDIX domain U876_02630 PF06853 Protein of unknown function (DUF1249) U876_02635 PF00149 Calcineurin-like phosphoesterase U876_02640 PF05728 Uncharacterised protein family (UPF0227) U876_02645 PF00293 NUDIX domain U876_02655 PF07869 Protein of unknown function (DUF1656) U876_02660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion U876_02660 PF00529 HlyD membrane-fusion protein of T1SS U876_02665 PF04632 Fusaric acid resistance protein family U876_02670 PF00204 DNA gyrase B U876_02670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_02670 PF00986 DNA gyrase B subunit, carboxyl terminus U876_02670 PF01751 Toprim domain U876_02675 PF03989 DNA gyrase C-terminal domain, beta-propeller U876_02675 PF00521 DNA gyrase/topoisomerase IV, subunit A U876_02710 PF00226 DnaJ domain U876_02710 PF00684 DnaJ central domain U876_02710 PF01556 DnaJ C terminal domain U876_02715 PF00578 AhpC/TSA family U876_02740 PF01553 Acyltransferase U876_02745 PF04012 PspA/IM30 family U876_02760 PF01541 GIY-YIG catalytic domain U876_02770 PF00892 EamA-like transporter family U876_02775 PF03167 Uracil DNA glycosylase superfamily U876_02780 PF00892 EamA-like transporter family U876_02790 PF00950 ABC 3 transport family U876_02795 PF00005 ABC transporter U876_02800 PF01297 Zinc-uptake complex component A periplasmic U876_02820 PF01476 LysM domain U876_02820 PF01551 Peptidase family M23 U876_02820 PF08525 Opacity-associated protein A N-terminal motif U876_02825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain U876_02830 PF04222 Protein of unknown function (DUF416) U876_02845 PF02028 BCCT, betaine/carnitine/choline family transporter U876_02850 PF01624 MutS domain I U876_02850 PF00488 MutS domain V U876_02850 PF05190 MutS family domain IV U876_02850 PF05192 MutS domain III U876_02850 PF05188 MutS domain II U876_02870 PF02464 Competence-damaged protein U876_02875 PF00154 recA bacterial DNA recombination protein U876_02880 PF02631 RecX family U876_02885 PF02272 DHHA1 domain U876_02885 PF01411 tRNA synthetases class II (A) U876_02885 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain U876_02890 PF00696 Amino acid kinase family U876_02890 PF01842 ACT domain U876_02890 PF13840 ACT domain U876_02895 PF02599 Global regulator protein family U876_02930 PF00768 D-alanyl-D-alanine carboxypeptidase U876_02935 PF09335 SNARE associated Golgi protein U876_02940 PF03471 Transporter associated domain U876_02940 PF00571 CBS domain U876_02940 PF01595 Cyclin M transmembrane N-terminal domain U876_02945 PF08264 Anticodon-binding domain of tRNA U876_02945 PF00133 tRNA synthetases class I (I, L, M and V) U876_02945 PF10458 Valyl tRNA synthetase tRNA binding arm U876_02950 PF04364 DNA polymerase III chi subunit, HolC U876_02955 PF00883 Cytosol aminopeptidase family, catalytic domain U876_02955 PF02789 Cytosol aminopeptidase family, N-terminal domain U876_02960 PF03739 Lipopolysaccharide export system permease LptF/LptG U876_02970 PF03739 Lipopolysaccharide export system permease LptF/LptG U876_02985 PF00589 Phage integrase family U876_02985 PF13356 Arm DNA-binding domain U876_03000 PF10548 P22AR C-terminal domain U876_03000 PF08346 AntA/AntB antirepressor U876_03035 PF00909 Ammonium Transporter Family U876_03040 PF05958 tRNA (Uracil-5-)-methyltransferase U876_03040 PF01938 TRAM domain U876_03045 PF00114 Pilin (bacterial filament) U876_03045 PF07963 Prokaryotic N-terminal methylation motif U876_03050 PF01026 TatD related DNase U876_03055 PF07662 Na+ dependent nucleoside transporter C-terminus U876_03055 PF07670 Nucleoside recognition U876_03055 PF01773 Na+ dependent nucleoside transporter N-terminus U876_03065 PF01791 DeoC/LacD family aldolase U876_03070 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain U876_03070 PF02885 Glycosyl transferase family, helical bundle domain U876_03070 PF00591 Glycosyl transferase family, a/b domain U876_03075 PF01676 Metalloenzyme superfamily U876_03080 PF01048 Phosphorylase superfamily U876_03085 PF00563 EAL domain U876_03085 PF00990 Diguanylate cyclase, GGDEF domain U876_03085 PF08448 PAS fold U876_03085 PF08447 PAS fold U876_03085 PF13426 PAS domain U876_03085 PF05231 MASE1 U876_03095 PF18429 Domain of unknown function (DUF5609) U876_03110 PF18073 Rubredoxin metal binding domain U876_03115 PF07238 PilZ domain U876_03120 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ U876_03125 PF00216 Bacterial DNA-binding protein U876_03140 PF01207 Dihydrouridine synthase (Dus) U876_03145 PF01475 Ferric uptake regulator family U876_03160 PF05525 Branched-chain amino acid transport protein U876_03165 PF05525 Branched-chain amino acid transport protein U876_03170 PF05175 Methyltransferase small domain U876_03175 PF00270 DEAD/DEAH box helicase U876_03175 PF00271 Helicase conserved C-terminal domain U876_03180 PF03883 Peroxide stress protein YaaA U876_03185 PF00437 Type II/IV secretion system protein U876_03190 PF00437 Type II/IV secretion system protein U876_03195 PF01168 Alanine racemase, N-terminal domain U876_03200 PF14748 Pyrroline-5-carboxylate reductase dimerisation U876_03200 PF03807 NADP oxidoreductase coenzyme F420-dependent U876_03205 PF02325 YGGT family U876_03210 PF02594 Uncharacterised ACR, YggU family COG1872 U876_03225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle U876_03235 PF00132 Bacterial transferase hexapeptide (six repeats) U876_03240 PF10952 Protein of unknown function (DUF2753) U876_03245 PF00378 Enoyl-CoA hydratase/isomerase U876_03260 PF00106 short chain dehydrogenase U876_03265 PF03129 Anticodon binding domain U876_03265 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) U876_03265 PF04073 Aminoacyl-tRNA editing domain U876_03270 PF00672 HAMP domain U876_03270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_03275 PF01330 RuvA N terminal domain U876_03275 PF07499 RuvA, C-terminal domain U876_03280 PF05496 Holliday junction DNA helicase RuvB P-loop domain U876_03280 PF05491 RuvB C-terminal winged helix domain U876_03280 PF17864 RuvB AAA lid domain U876_03285 PF01654 Cytochrome bd terminal oxidase subunit I U876_03290 PF02322 Cytochrome bd terminal oxidase subunit II U876_03295 PF08173 Membrane bound YbgT-like protein U876_03300 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) U876_03305 PF03061 Thioesterase superfamily U876_03310 PF01618 MotA/TolQ/ExbB proton channel family U876_03315 PF02472 Biopolymer transport protein ExbD/TolR U876_03325 PF07676 WD40-like Beta Propeller Repeat U876_03325 PF04052 TolB amino-terminal domain U876_03330 PF00691 OmpA family U876_03335 PF13174 Tetratricopeptide repeat U876_03335 PF16331 TolA binding protein trimerisation U876_03350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_03350 PF00672 HAMP domain U876_03355 PF02445 Quinolinate synthetase A protein U876_03360 PF01263 Aldose 1-epimerase U876_03365 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain U876_03365 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain U876_03370 PF02446 4-alpha-glucanotransferase U876_03375 PF02806 Alpha amylase, C-terminal all-beta domain U876_03375 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) U876_03375 PF00128 Alpha amylase, catalytic domain U876_03380 PF00128 Alpha amylase, catalytic domain U876_03380 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) U876_03385 PF01641 SelR domain U876_03395 PF00293 NUDIX domain U876_03400 PF00107 Zinc-binding dehydrogenase U876_03400 PF16884 N-terminal domain of oxidoreductase U876_03405 PF02566 OsmC-like protein U876_03410 PF01047 MarR family U876_03425 PF01037 Lrp/AsnC ligand binding domain U876_03435 PF07690 Major Facilitator Superfamily U876_03455 PF00209 Sodium:neurotransmitter symporter family U876_03465 PF00209 Sodium:neurotransmitter symporter family U876_03490 PF00155 Aminotransferase class I and II U876_03490 PF00392 Bacterial regulatory proteins, gntR family U876_03500 PF01810 LysE type translocator U876_03505 PF01177 Asp/Glu/Hydantoin racemase U876_03510 PF07731 Multicopper oxidase U876_03510 PF07732 Multicopper oxidase U876_03510 PF00394 Multicopper oxidase U876_03520 PF04074 YhcH/YjgK/YiaL U876_03525 PF00871 Acetokinase family U876_03530 PF00924 Mechanosensitive ion channel U876_03535 PF03734 L,D-transpeptidase catalytic domain U876_03535 PF17969 L,D-transpeptidase C-terminal domain U876_03540 PF00474 Sodium:solute symporter family U876_03545 PF00561 alpha/beta hydrolase fold U876_03580 PF02525 Flavodoxin-like fold U876_03585 PF03466 LysR substrate binding domain U876_03585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_03590 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ U876_03600 PF12848 ABC transporter U876_03600 PF00005 ABC transporter U876_03605 PF00571 CBS domain U876_03605 PF01380 SIS domain U876_03610 PF01957 NfeD-like C-terminal, partner-binding U876_03615 PF01145 SPFH domain / Band 7 family U876_03615 PF16200 C-terminal region of band_7 U876_03620 PF14824 Sirohaem biosynthesis protein central U876_03620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases U876_03620 PF10414 Sirohaem synthase dimerisation region U876_03625 PF01507 Phosphoadenosine phosphosulfate reductase family U876_03630 PF00009 Elongation factor Tu GTP binding domain U876_03635 PF03600 Citrate transporter U876_03635 PF02080 TrkA-C domain U876_03660 PF08447 PAS fold U876_03660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_03680 PF00005 ABC transporter U876_03695 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) U876_03710 PF00719 Inorganic pyrophosphatase U876_03715 PF08245 Mur ligase middle domain U876_03715 PF01225 Mur ligase family, catalytic domain U876_03715 PF02875 Mur ligase family, glutamate ligase domain U876_03720 PF02441 Flavoprotein U876_03725 PF00440 Bacterial regulatory proteins, tetR family U876_03730 PF00156 Phosphoribosyl transferase domain U876_03735 PF00005 ABC transporter U876_03740 PF01061 ABC-2 type transporter U876_03745 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component U876_03750 PF01869 BadF/BadG/BcrA/BcrD ATPase family U876_03770 PF02569 Pantoate-beta-alanine ligase U876_03775 PF02548 Ketopantoate hydroxymethyltransferase U876_03780 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) U876_03785 PF12626 Polymerase A arginine-rich C-terminus U876_03785 PF01743 Poly A polymerase head domain U876_03785 PF12627 Probable RNA and SrmB- binding site of polymerase A U876_03790 PF00749 tRNA synthetases class I (E and Q), catalytic domain U876_03795 PF01258 Prokaryotic dksA/traR C4-type zinc finger U876_03800 PF17746 SfsA N-terminal OB domain U876_03800 PF03749 Sugar fermentation stimulation protein RE domain U876_03810 PF00271 Helicase conserved C-terminal domain U876_03810 PF00270 DEAD/DEAH box helicase U876_03810 PF04408 Helicase associated domain (HA2) U876_03810 PF08482 ATP-dependent helicase C-terminal U876_03815 PF00905 Penicillin binding protein transpeptidase domain U876_03815 PF00912 Transglycosylase U876_03815 PF14814 Bifunctional transglycosylase second domain U876_03820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily U876_03825 PF00893 Small Multidrug Resistance protein U876_03830 PF00893 Small Multidrug Resistance protein U876_03840 PF11849 Domain of unknown function (DUF3369) U876_03850 PF01569 PAP2 superfamily U876_03865 PF00202 Aminotransferase class-III U876_03870 PF00654 Voltage gated chloride channel U876_03880 PF01521 Iron-sulphur cluster biosynthesis U876_03905 PF01810 LysE type translocator U876_03910 PF02954 Bacterial regulatory protein, Fis family U876_03915 PF01207 Dihydrouridine synthase (Dus) U876_03920 PF02321 Outer membrane efflux protein U876_03925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion U876_03955 PF00072 Response regulator receiver domain U876_03960 PF00854 POT family U876_03965 PF00483 Nucleotidyl transferase U876_03975 PF00459 Inositol monophosphatase family U876_03980 PF03795 YCII-related domain U876_03985 PF04279 Intracellular septation protein A U876_03990 PF00282 Pyridoxal-dependent decarboxylase conserved domain U876_03995 PF03006 Haemolysin-III related U876_04000 PF02080 TrkA-C domain U876_04000 PF06826 Predicted Permease Membrane Region U876_04015 PF00072 Response regulator receiver domain U876_04015 PF01584 CheW-like domain U876_04020 PF13472 GDSL-like Lipase/Acylhydrolase family U876_04025 PF00005 ABC transporter U876_04035 PF08338 Domain of unknown function (DUF1731) U876_04035 PF01370 NAD dependent epimerase/dehydratase family U876_04040 PF00563 EAL domain U876_04040 PF12792 CSS motif domain associated with EAL U876_04045 PF00155 Aminotransferase class I and II U876_04050 PF01483 Proprotein convertase P-domain U876_04050 PF04389 Peptidase family M28 U876_04055 PF02390 Putative methyltransferase U876_04060 PF04320 Protein with unknown function (DUF469) U876_04065 PF04960 Glutaminase U876_04070 PF00581 Rhodanese-like domain U876_04075 PF00082 Subtilase family U876_04075 PF05922 Peptidase inhibitor I9 U876_04080 PF06004 Bacterial protein of unknown function (DUF903) U876_04085 PF00664 ABC transporter transmembrane region U876_04085 PF00005 ABC transporter U876_04090 PF00561 alpha/beta hydrolase fold U876_04110 PF05547 Immune inhibitor A peptidase M6 U876_04110 PF00801 PKD domain U876_04115 PF06877 Regulator of ribonuclease activity B U876_04120 PF03707 Bacterial signalling protein N terminal repeat U876_04120 PF00563 EAL domain U876_04120 PF00990 Diguanylate cyclase, GGDEF domain U876_04140 PF09905 DNA-binding protein VF530 U876_04145 PF02666 Phosphatidylserine decarboxylase U876_04150 PF03193 RsgA GTPase U876_04155 PF00929 Exonuclease U876_04185 PF00313 'Cold-shock' DNA-binding domain U876_04195 PF00672 HAMP domain U876_04195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_04200 PF00749 tRNA synthetases class I (E and Q), catalytic domain U876_04240 PF00704 Glycosyl hydrolases family 18 U876_04240 PF06483 Chitinase C U876_04255 PF02472 Biopolymer transport protein ExbD/TolR U876_04260 PF01618 MotA/TolQ/ExbB proton channel family U876_04265 PF01618 MotA/TolQ/ExbB proton channel family U876_04275 PF00593 TonB dependent receptor U876_04275 PF07715 TonB-dependent Receptor Plug Domain U876_04280 PF00528 Binding-protein-dependent transport system inner membrane component U876_04285 PF12911 N-terminal TM domain of oligopeptide transport permease C U876_04285 PF00528 Binding-protein-dependent transport system inner membrane component U876_04295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region U876_04295 PF00005 ABC transporter U876_04300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region U876_04300 PF00005 ABC transporter U876_04310 PF01546 Peptidase family M20/M25/M40 U876_04310 PF07687 Peptidase dimerisation domain U876_04315 PF00156 Phosphoribosyl transferase domain U876_04325 PF07417 Sigma factor-binding transcriptional regulator Crl U876_04330 PF00696 Amino acid kinase family U876_04330 PF01472 PUA domain U876_04335 PF00171 Aldehyde dehydrogenase family U876_04345 PF00582 Universal stress protein family U876_04360 PF00384 Molybdopterin oxidoreductase U876_04360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain U876_04360 PF04324 BFD-like [2Fe-2S] binding domain U876_04360 PF01568 Molydopterin dinucleotide binding domain U876_04365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases U876_04365 PF14824 Sirohaem biosynthesis protein central U876_04365 PF10414 Sirohaem synthase dimerisation region U876_04375 PF00005 ABC transporter U876_04380 PF00528 Binding-protein-dependent transport system inner membrane component U876_04385 PF00005 ABC transporter U876_04390 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain U876_04390 PF07992 Pyridine nucleotide-disulphide oxidoreductase U876_04390 PF13806 Rieske-like [2Fe-2S] domain U876_04390 PF04324 BFD-like [2Fe-2S] binding domain U876_04390 PF18267 Rubredoxin NAD+ reductase C-terminal domain U876_04390 PF01077 Nitrite and sulphite reductase 4Fe-4S domain U876_04395 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain U876_04395 PF01077 Nitrite and sulphite reductase 4Fe-4S domain U876_04395 PF04324 BFD-like [2Fe-2S] binding domain U876_04395 PF07992 Pyridine nucleotide-disulphide oxidoreductase U876_04395 PF18267 Rubredoxin NAD+ reductase C-terminal domain U876_04395 PF13806 Rieske-like [2Fe-2S] domain U876_04400 PF00294 pfkB family carbohydrate kinase U876_04405 PF04227 Indigoidine synthase A like protein U876_04410 PF00194 Eukaryotic-type carbonic anhydrase U876_04415 PF00034 Cytochrome c U876_04415 PF03150 Di-haem cytochrome c peroxidase U876_04450 PF00550 Phosphopantetheine attachment site U876_04455 PF00550 Phosphopantetheine attachment site U876_04465 PF13193 AMP-binding enzyme C-terminal domain U876_04465 PF00501 AMP-binding enzyme U876_04470 PF07977 FabA-like domain U876_04480 PF00221 Aromatic amino acid lyase U876_04505 PF00109 Beta-ketoacyl synthase, N-terminal domain U876_04505 PF02801 Beta-ketoacyl synthase, C-terminal domain U876_04520 PF02801 Beta-ketoacyl synthase, C-terminal domain U876_04520 PF00109 Beta-ketoacyl synthase, N-terminal domain U876_04530 PF00994 Probable molybdopterin binding domain U876_04540 PF06738 Putative threonine/serine exporter U876_04545 PF12821 Threonine/Serine exporter, ThrE U876_04550 PF00186 Dihydrofolate reductase U876_04555 PF00571 CBS domain U876_04555 PF00005 ABC transporter U876_04560 PF00528 Binding-protein-dependent transport system inner membrane component U876_04565 PF04069 Substrate binding domain of ABC-type glycine betaine transport system U876_04570 PF01507 Phosphoadenosine phosphosulfate reductase family U876_04575 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain U876_04575 PF01077 Nitrite and sulphite reductase 4Fe-4S domain U876_04580 PF00258 Flavodoxin U876_04580 PF00667 FAD binding domain U876_04580 PF00175 Oxidoreductase NAD-binding domain U876_04585 PF02567 Phenazine biosynthesis-like protein U876_04590 PF01336 OB-fold nucleic acid binding domain U876_04590 PF00152 tRNA synthetases class II (D, K and N) U876_04595 PF03462 PCRF domain U876_04595 PF00472 RF-1 domain U876_04600 PF02743 Cache domain U876_04600 PF00672 HAMP domain U876_04600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_04605 PF03616 Sodium/glutamate symporter U876_04610 PF17763 Glutaminase/Asparaginase C-terminal domain U876_04610 PF00710 Asparaginase, N-terminal U876_04615 PF07023 Protein of unknown function (DUF1315) U876_04620 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain U876_04620 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain U876_04635 PF01343 Peptidase family S49 U876_04640 PF07992 Pyridine nucleotide-disulphide oxidoreductase U876_04640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family U876_04645 PF00881 Nitroreductase family U876_04650 PF14602 Hexapeptide repeat of succinyl-transferase U876_04650 PF12464 Maltose acetyltransferase U876_04655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain U876_04655 PF01842 ACT domain U876_04655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain U876_04665 PF00107 Zinc-binding dehydrogenase U876_04665 PF08240 Alcohol dehydrogenase GroES-like domain U876_04670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_04670 PF03466 LysR substrate binding domain U876_04675 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 U876_04675 PF00367 phosphotransferase system, EIIB U876_04675 PF02378 Phosphotransferase system, EIIC U876_04680 PF00474 Sodium:solute symporter family U876_04690 PF02785 Biotin carboxylase C-terminal domain U876_04690 PF00289 Biotin carboxylase, N-terminal domain U876_04690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain U876_04695 PF00364 Biotin-requiring enzyme U876_04700 PF01220 Dehydroquinase class II U876_04710 PF13193 AMP-binding enzyme C-terminal domain U876_04710 PF00501 AMP-binding enzyme U876_04710 PF16177 Acetyl-coenzyme A synthetase N-terminus U876_04720 PF00563 EAL domain U876_04720 PF00990 Diguanylate cyclase, GGDEF domain U876_04720 PF03707 Bacterial signalling protein N terminal repeat U876_04720 PF13188 PAS domain U876_04740 PF02613 Nitrate reductase delta subunit U876_04755 PF00464 Serine hydroxymethyltransferase U876_04770 PF03477 ATP cone domain U876_04775 PF01872 RibD C-terminal domain U876_04775 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region U876_04780 PF00677 Lumazine binding domain U876_04785 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase U876_04785 PF00925 GTP cyclohydrolase II U876_04795 PF00885 6,7-dimethyl-8-ribityllumazine synthase U876_04800 PF01029 NusB family U876_04805 PF02769 AIR synthase related protein, C-terminal domain U876_04805 PF00586 AIR synthase related protein, N-terminal domain U876_04810 PF04608 Phosphatidylglycerophosphatase A U876_04815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region U876_04815 PF00005 ABC transporter U876_04820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle U876_04830 PF12911 N-terminal TM domain of oligopeptide transport permease C U876_04830 PF00528 Binding-protein-dependent transport system inner membrane component U876_04835 PF02780 Transketolase, C-terminal domain U876_04835 PF02779 Transketolase, pyrimidine binding domain U876_04835 PF13292 1-deoxy-D-xylulose-5-phosphate synthase U876_04840 PF00348 Polyprenyl synthetase U876_04845 PF02609 Exonuclease VII small subunit U876_04850 PF01618 MotA/TolQ/ExbB proton channel family U876_04855 PF00691 OmpA family U876_04855 PF13677 Membrane MotB of proton-channel complex MotA/MotB U876_04860 PF01272 Transcription elongation factor, GreA/GreB, C-term U876_04860 PF03449 Transcription elongation factor, N-terminal U876_04870 PF01985 CRS1 / YhbY (CRM) domain U876_04875 PF01728 FtsJ-like methyltransferase U876_04880 PF17862 AAA+ lid domain U876_04880 PF01434 Peptidase family M41 U876_04880 PF00004 ATPase family associated with various cellular activities (AAA) U876_04880 PF06480 FtsH Extracellular U876_04885 PF00809 Pterin binding enzyme U876_04890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III U876_04890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain U876_04890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II U876_04890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I U876_04895 PF00121 Triosephosphate isomerase U876_04900 PF03840 Preprotein translocase SecG subunit U876_04915 PF02576 RimP N-terminal domain U876_04915 PF17384 RimP C-terminal SH3 domain U876_04920 PF00575 S1 RNA binding domain U876_04920 PF08529 NusA N-terminal domain U876_04920 PF13184 NusA-like KH domain U876_04925 PF04760 Translation initiation factor IF-2, N-terminal region U876_04925 PF00009 Elongation factor Tu GTP binding domain U876_04925 PF08364 Bacterial translation initiation factor IF-2 associated region U876_04925 PF11987 Translation-initiation factor 2 U876_04930 PF02033 Ribosome-binding factor A U876_04935 PF01509 TruB family pseudouridylate synthase (N terminal domain) U876_04935 PF16198 tRNA pseudouridylate synthase B C-terminal domain U876_04935 PF09157 Pseudouridine synthase II TruB, C-terminal U876_04940 PF00312 Ribosomal protein S15 U876_04945 PF00575 S1 RNA binding domain U876_04945 PF03725 3' exoribonuclease family, domain 2 U876_04945 PF01138 3' exoribonuclease family, domain 1 U876_04945 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain U876_04945 PF00013 KH domain U876_04955 PF03707 Bacterial signalling protein N terminal repeat U876_04955 PF00990 Diguanylate cyclase, GGDEF domain U876_04955 PF00563 EAL domain U876_04960 PF02635 DsrE/DsrF-like family U876_04970 PF10415 Fumarase C C-terminus U876_04970 PF00206 Lyase U876_04975 PF03575 Peptidase family S51 U876_04980 PF13722 5TM C-terminal transporter carbon starvation CstA U876_04980 PF02554 Carbon starvation protein CstA U876_04985 PF00072 Response regulator receiver domain U876_04985 PF04397 LytTr DNA-binding domain U876_04995 PF00196 Bacterial regulatory proteins, luxR family U876_04995 PF00072 Response regulator receiver domain U876_05000 PF00989 PAS fold U876_05000 PF00512 His Kinase A (phospho-acceptor) domain U876_05000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_05005 PF13247 4Fe-4S dicluster domain U876_05010 PF03916 Polysulphide reductase, NrfD U876_05015 PF04879 Molybdopterin oxidoreductase Fe4S4 domain U876_05015 PF00384 Molybdopterin oxidoreductase U876_05015 PF01568 Molydopterin dinucleotide binding domain U876_05050 PF17969 L,D-transpeptidase C-terminal domain U876_05050 PF03734 L,D-transpeptidase catalytic domain U876_05060 PF01523 Putative modulator of DNA gyrase U876_05065 PF01523 Putative modulator of DNA gyrase U876_05070 PF00258 Flavodoxin U876_05075 PF00589 Phage integrase family U876_05075 PF02899 Phage integrase, N-terminal SAM-like domain U876_05080 PF01741 Large-conductance mechanosensitive channel, MscL U876_05085 PF13098 Thioredoxin-like domain U876_05085 PF10411 Disulfide bond isomerase protein N-terminus U876_05090 PF01368 DHH family U876_05090 PF02272 DHHA1 domain U876_05090 PF17768 RecJ OB domain U876_05095 PF13411 MerR HTH family regulatory protein U876_05110 PF02508 Rnf-Nqr subunit, membrane protein U876_05115 PF06821 Serine hydrolase U876_05125 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family U876_05125 PF04055 Radical SAM superfamily U876_05135 PF03099 Biotin/lipoate A/B protein ligase family U876_05140 PF04359 Protein of unknown function (DUF493) U876_05145 PF07943 Penicillin-binding protein 5, C-terminal domain U876_05145 PF00768 D-alanyl-D-alanine carboxypeptidase U876_05150 PF03330 Lytic transglycolase U876_05150 PF05036 Sporulation related domain U876_05155 PF13406 Transglycosylase SLT domain U876_05165 PF01098 Cell cycle protein U876_05170 PF03717 Penicillin-binding Protein dimerisation domain U876_05170 PF00905 Penicillin binding protein transpeptidase domain U876_05175 PF02590 Predicted SPOUT methyltransferase U876_05185 PF01467 Cytidylyltransferase-like U876_05200 PF08264 Anticodon-binding domain of tRNA U876_05200 PF00133 tRNA synthetases class I (I, L, M and V) U876_05200 PF13603 Leucyl-tRNA synthetase, Domain 2 U876_05205 PF07295 Zinc-ribbon containing domain U876_05210 PF00795 Carbon-nitrogen hydrolase U876_05215 PF00571 CBS domain U876_05215 PF03471 Transporter associated domain U876_05220 PF02130 Uncharacterized protein family UPF0054 U876_05225 PF02562 PhoH-like protein U876_05230 PF00919 Uncharacterized protein family UPF0004 U876_05230 PF01938 TRAM domain U876_05230 PF04055 Radical SAM superfamily U876_05235 PF01494 FAD binding domain U876_05240 PF00857 Isochorismatase family U876_05245 PF00313 'Cold-shock' DNA-binding domain U876_05250 PF05230 MASE2 domain U876_05250 PF00990 Diguanylate cyclase, GGDEF domain U876_05265 PF13419 Haloacid dehalogenase-like hydrolase U876_05275 PF00990 Diguanylate cyclase, GGDEF domain U876_05275 PF08448 PAS fold U876_05285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain U876_05285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain U876_05295 PF09997 Predicted membrane protein (DUF2238) U876_05300 PF08207 Elongation factor P (EF-P) KOW-like domain U876_05300 PF09285 Elongation factor P, C-terminal U876_05300 PF01132 Elongation factor P (EF-P) OB domain U876_05310 PF00478 IMP dehydrogenase / GMP reductase domain U876_05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_05320 PF00512 His Kinase A (phospho-acceptor) domain U876_05320 PF08521 Two-component sensor kinase N-terminal U876_05325 PF00072 Response regulator receiver domain U876_05325 PF00486 Transcriptional regulatory protein, C terminal U876_05345 PF00501 AMP-binding enzyme U876_05360 PF06224 Winged helix DNA-binding domain U876_05380 PF02313 Fumarate reductase subunit D U876_05385 PF02300 Fumarate reductase subunit C U876_05390 PF13085 2Fe-2S iron-sulfur cluster binding domain U876_05390 PF13183 4Fe-4S dicluster domain U876_05395 PF02910 Fumarate reductase flavoprotein C-term U876_05395 PF00890 FAD binding domain U876_05400 PF02743 Cache domain U876_05400 PF00672 HAMP domain U876_05400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_05405 PF03009 Glycerophosphoryl diester phosphodiesterase family U876_05410 PF12795 Mechanosensitive ion channel porin domain U876_05410 PF00924 Mechanosensitive ion channel U876_05410 PF12794 Mechanosensitive ion channel inner membrane domain 1 U876_05420 PF08525 Opacity-associated protein A N-terminal motif U876_05420 PF01476 LysM domain U876_05420 PF01551 Peptidase family M23 U876_05435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_05435 PF03466 LysR substrate binding domain U876_05450 PF02743 Cache domain U876_05450 PF00672 HAMP domain U876_05450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_05455 PF03466 LysR substrate binding domain U876_05455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_05460 PF00905 Penicillin binding protein transpeptidase domain U876_05460 PF00912 Transglycosylase U876_05460 PF17092 Penicillin-binding protein OB-like domain U876_05485 PF00263 Bacterial type II and III secretion system protein U876_05485 PF11741 AMIN domain U876_05485 PF03958 Bacterial type II/III secretion system short domain U876_05485 PF07660 Secretin and TonB N terminus short domain U876_05490 PF01202 Shikimate kinase U876_05495 PF01761 3-dehydroquinate synthase U876_05505 PF02086 D12 class N6 adenine-specific DNA methyltransferase U876_05510 PF00834 Ribulose-phosphate 3 epimerase family U876_05515 PF13419 Haloacid dehalogenase-like hydrolase U876_05520 PF00579 tRNA synthetases class I (W and Y) U876_05530 PF00117 Glutamine amidotransferase class-I U876_05535 PF00202 Aminotransferase class-III U876_05540 PF04958 Arginine N-succinyltransferase beta subunit U876_05545 PF00171 Aldehyde dehydrogenase family U876_05555 PF13419 Haloacid dehalogenase-like hydrolase U876_05560 PF07690 Major Facilitator Superfamily U876_05565 PF10371 Domain of unknown function U876_05565 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg U876_05565 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II U876_05565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain U876_05565 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase U876_05595 PF01048 Phosphorylase superfamily U876_05600 PF04973 Nicotinamide mononucleotide transporter U876_05605 PF03600 Citrate transporter U876_05605 PF02080 TrkA-C domain U876_05650 PF06071 Protein of unknown function (DUF933) U876_05650 PF01926 50S ribosome-binding GTPase U876_05655 PF01195 Peptidyl-tRNA hydrolase U876_05660 PF00149 Calcineurin-like phosphoesterase U876_05660 PF02872 5'-nucleotidase, C-terminal domain U876_05665 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase U876_05665 PF14572 Phosphoribosyl synthetase-associated domain U876_05675 PF00288 GHMP kinases N terminal domain U876_05675 PF08544 GHMP kinases C terminal U876_05680 PF03550 Outer membrane lipoprotein LolB U876_05685 PF01488 Shikimate / quinate 5-dehydrogenase U876_05685 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain U876_05685 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain U876_05690 PF03462 PCRF domain U876_05690 PF00472 RF-1 domain U876_05695 PF17827 PrmC N-terminal domain U876_05695 PF13847 Methyltransferase domain U876_05705 PF13369 Transglutaminase-like superfamily U876_05710 PF00793 DAHP synthetase I family U876_05715 PF00375 Sodium:dicarboxylate symporter family U876_05720 PF01228 Glycine radical U876_05725 PF03167 Uracil DNA glycosylase superfamily U876_05740 PF00923 Transaldolase/Fructose-6-phosphate aldolase U876_05745 PF01235 Sodium:alanine symporter family U876_05750 PF11992 Domain of unknown function (DUF3488) U876_05750 PF13559 Domain of unknown function (DUF4129) U876_05750 PF01841 Transglutaminase-like superfamily U876_05760 PF07726 ATPase family associated with various cellular activities (AAA) U876_05760 PF17863 AAA lid domain U876_05765 PF00144 Beta-lactamase U876_05770 PF00854 POT family U876_05775 PF03652 Holliday junction resolvase U876_05780 PF02622 Uncharacterized ACR, COG1678 U876_05785 PF12729 Four helix bundle sensory module for signal transduction U876_05785 PF00672 HAMP domain U876_05785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_05790 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain U876_05790 PF02951 Prokaryotic glutathione synthetase, N-terminal domain U876_05795 PF04452 RNA methyltransferase U876_05800 PF04231 Endonuclease I U876_05805 PF17283 SprT-like zinc ribbon domain U876_05805 PF10263 SprT-like family U876_05810 PF00438 S-adenosylmethionine synthetase, N-terminal domain U876_05810 PF02773 S-adenosylmethionine synthetase, C-terminal domain U876_05810 PF02772 S-adenosylmethionine synthetase, central domain U876_05815 PF02779 Transketolase, pyrimidine binding domain U876_05815 PF00456 Transketolase, thiamine diphosphate binding domain U876_05815 PF02780 Transketolase, C-terminal domain U876_05840 PF01042 Endoribonuclease L-PSP U876_05845 PF01965 DJ-1/PfpI family U876_05855 PF03702 Anhydro-N-acetylmuramic acid kinase U876_05870 PF01476 LysM domain U876_05870 PF08525 Opacity-associated protein A N-terminal motif U876_05870 PF01551 Peptidase family M23 U876_05875 PF00579 tRNA synthetases class I (W and Y) U876_05880 PF01204 Trehalase U876_05890 PF01161 Phosphatidylethanolamine-binding protein U876_05900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_05900 PF03466 LysR substrate binding domain U876_05910 PF00155 Aminotransferase class I and II U876_05915 PF07690 Major Facilitator Superfamily U876_05920 PF03466 LysR substrate binding domain U876_05920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_05925 PF00106 short chain dehydrogenase U876_05930 PF08496 Peptidase family S49 N-terminal U876_05930 PF01343 Peptidase family S49 U876_05935 PF04996 Succinylarginine dihydrolase U876_05940 PF01131 DNA topoisomerase U876_05940 PF01751 Toprim domain U876_05940 PF08272 Topoisomerase I zinc-ribbon-like U876_05940 PF01396 Topoisomerase DNA binding C4 zinc finger U876_05955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_05955 PF08447 PAS fold U876_05965 PF00728 Glycosyl hydrolase family 20, catalytic domain U876_05965 PF02838 Glycosyl hydrolase family 20, domain 2 U876_05970 PF01869 BadF/BadG/BcrA/BcrD ATPase family U876_05980 PF00005 ABC transporter U876_05980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region U876_05985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region U876_05985 PF00005 ABC transporter U876_05990 PF00528 Binding-protein-dependent transport system inner membrane component U876_05990 PF12911 N-terminal TM domain of oligopeptide transport permease C U876_05995 PF00528 Binding-protein-dependent transport system inner membrane component U876_06000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle U876_06005 PF00512 His Kinase A (phospho-acceptor) domain U876_06005 PF09308 LuxQ, periplasmic U876_06005 PF00072 Response regulator receiver domain U876_06005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_06025 PF10725 Protein of unknown function (DUF2517) U876_06035 PF05114 Protein of unknown function (DUF692) U876_06055 PF13426 PAS domain U876_06055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_06055 PF08447 PAS fold U876_06070 PF04632 Fusaric acid resistance protein family U876_06075 PF03453 MoeA N-terminal region (domain I and II) U876_06075 PF00994 Probable molybdopterin binding domain U876_06075 PF03454 MoeA C-terminal region (domain IV) U876_06080 PF12804 MobA-like NTP transferase domain U876_06085 PF00005 ABC transporter U876_06090 PF00528 Binding-protein-dependent transport system inner membrane component U876_06095 PF12849 PBP superfamily domain U876_06100 PF02954 Bacterial regulatory protein, Fis family U876_06100 PF00072 Response regulator receiver domain U876_06100 PF00158 Sigma-54 interaction domain U876_06105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_06105 PF00512 His Kinase A (phospho-acceptor) domain U876_06105 PF00989 PAS fold U876_06110 PF12727 PBP superfamily domain U876_06110 PF12728 Helix-turn-helix domain U876_06115 PF02634 FdhD/NarQ family U876_06155 PF01568 Molydopterin dinucleotide binding domain U876_06155 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region U876_06155 PF12838 4Fe-4S dicluster domain U876_06155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain U876_06155 PF12838 4Fe-4S dicluster domain U876_06155 PF00384 Molybdopterin oxidoreductase U876_06155 PF01568 Molydopterin dinucleotide binding domain U876_06155 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region U876_06155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain U876_06155 PF00384 Molybdopterin oxidoreductase U876_06160 PF13247 4Fe-4S dicluster domain U876_06170 PF00072 Response regulator receiver domain U876_06175 PF00390 Malic enzyme, N-terminal domain U876_06175 PF03949 Malic enzyme, NAD binding domain U876_06180 PF16998 17 kDa outer membrane surface antigen U876_06180 PF05433 Glycine zipper 2TM domain U876_06190 PF00860 Permease family U876_06195 PF10282 Lactonase, 7-bladed beta-propeller U876_06205 PF12794 Mechanosensitive ion channel inner membrane domain 1 U876_06205 PF00924 Mechanosensitive ion channel U876_06205 PF12795 Mechanosensitive ion channel porin domain U876_06210 PF02887 Pyruvate kinase, alpha/beta domain U876_06210 PF00224 Pyruvate kinase, barrel domain U876_06220 PF04151 Bacterial pre-peptidase C-terminal domain U876_06220 PF04389 Peptidase family M28 U876_06225 PF02254 TrkA-N domain U876_06225 PF00999 Sodium/hydrogen exchanger family U876_06240 PF04381 Putative exonuclease, RdgC U876_06250 PF00149 Calcineurin-like phosphoesterase U876_06250 PF12320 Type 5 capsule protein repressor C-terminal domain U876_06255 PF13476 AAA domain U876_06270 PF01292 Prokaryotic cytochrome b561 U876_06280 PF00990 Diguanylate cyclase, GGDEF domain U876_06280 PF17151 Periplasmic sensor domain U876_06285 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 U876_06290 PF00391 PEP-utilising enzyme, mobile domain U876_06290 PF02896 PEP-utilising enzyme, TIM barrel domain U876_06290 PF05524 PEP-utilising enzyme, N-terminal U876_06295 PF00381 PTS HPr component phosphorylation site U876_06300 PF00291 Pyridoxal-phosphate dependent enzyme U876_06305 PF17871 AAA lid domain U876_06305 PF07724 AAA domain (Cdc48 subfamily) U876_06305 PF00004 ATPase family associated with various cellular activities (AAA) U876_06305 PF02861 Clp amino terminal domain, pathogenicity island component U876_06305 PF10431 C-terminal, D2-small domain, of ClpB protein U876_06315 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III U876_06315 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal U876_06320 PF01980 tRNA-methyltransferase O U876_06320 PF18389 TrmO C-terminal domain U876_06340 PF00005 ABC transporter U876_06340 PF00664 ABC transporter transmembrane region U876_06345 PF00005 ABC transporter U876_06345 PF00664 ABC transporter transmembrane region U876_06360 PF00486 Transcriptional regulatory protein, C terminal U876_06360 PF00072 Response regulator receiver domain U876_06375 PF03737 Aldolase/RraA U876_06395 PF00588 SpoU rRNA Methylase family U876_06400 PF00696 Amino acid kinase family U876_06400 PF01842 ACT domain U876_06400 PF13840 ACT domain U876_06400 PF00742 Homoserine dehydrogenase U876_06400 PF03447 Homoserine dehydrogenase, NAD binding domain U876_06405 PF08544 GHMP kinases C terminal U876_06405 PF00288 GHMP kinases N terminal domain U876_06410 PF00291 Pyridoxal-phosphate dependent enzyme U876_06410 PF14821 Threonine synthase N terminus U876_06415 PF13474 SnoaL-like domain U876_06430 PF12848 ABC transporter U876_06430 PF00005 ABC transporter U876_06450 PF01048 Phosphorylase superfamily U876_06465 PF00512 His Kinase A (phospho-acceptor) domain U876_06465 PF00072 Response regulator receiver domain U876_06465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_06465 PF00989 PAS fold U876_06465 PF01627 Hpt domain U876_06465 PF00497 Bacterial extracellular solute-binding proteins, family 3 U876_06470 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase U876_06480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase U876_06480 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase U876_06485 PF02690 Na+/Pi-cotransporter U876_06495 PF13520 Amino acid permease U876_06505 PF00324 Amino acid permease U876_06515 PF00202 Aminotransferase class-III U876_06520 PF00171 Aldehyde dehydrogenase family U876_06525 PF01381 Helix-turn-helix U876_06525 PF07883 Cupin domain U876_06530 PF01266 FAD dependent oxidoreductase U876_06545 PF00816 H-NS histone family U876_06550 PF00793 DAHP synthetase I family U876_06555 PF04954 Siderophore-interacting protein U876_06555 PF08021 Siderophore-interacting FAD-binding domain U876_06560 PF02321 Outer membrane efflux protein U876_06565 PF02687 FtsX-like permease family U876_06565 PF12704 MacB-like periplasmic core domain U876_06565 PF00005 ABC transporter U876_06570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion U876_06580 PF02833 DHHA2 domain U876_06580 PF01368 DHH family U876_06590 PF02463 RecF/RecN/SMC N terminal domain U876_06595 PF01513 ATP-NAD kinase U876_06600 PF01025 GrpE U876_06605 PF00012 Hsp70 protein U876_06610 PF01556 DnaJ C terminal domain U876_06610 PF00684 DnaJ central domain U876_06610 PF00226 DnaJ domain U876_06615 PF11471 Maltoporin periplasmic N-terminal extension U876_06615 PF02264 LamB porin U876_06620 PF00294 pfkB family carbohydrate kinase U876_06625 PF02378 Phosphotransferase system, EIIC U876_06625 PF00367 phosphotransferase system, EIIB U876_06630 PF08244 Glycosyl hydrolases family 32 C terminal U876_06630 PF00251 Glycosyl hydrolases family 32 N-terminal domain U876_06635 PF00356 Bacterial regulatory proteins, lacI family U876_06635 PF13407 Periplasmic binding protein domain U876_06640 PF02308 MgtC family U876_06655 PF01022 Bacterial regulatory protein, arsR family U876_06660 PF04143 Sulphur transport U876_06675 PF00873 AcrB/AcrD/AcrF family U876_06680 PF03707 Bacterial signalling protein N terminal repeat U876_06680 PF00990 Diguanylate cyclase, GGDEF domain U876_06680 PF00563 EAL domain U876_06685 PF03099 Biotin/lipoate A/B protein ligase family U876_06685 PF10437 Bacterial lipoate protein ligase C-terminus U876_06705 PF00873 AcrB/AcrD/AcrF family U876_06710 PF00529 HlyD membrane-fusion protein of T1SS U876_06710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion U876_06720 PF00873 AcrB/AcrD/AcrF family U876_06725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion U876_06730 PF03372 Endonuclease/Exonuclease/phosphatase family U876_06750 PF02424 ApbE family U876_06755 PF00127 Copper binding proteins, plastocyanin/azurin family U876_06770 PF01156 Inosine-uridine preferring nucleoside hydrolase U876_06780 PF13442 Cytochrome C oxidase, cbb3-type, subunit III U876_06780 PF00034 Cytochrome c U876_06790 PF00116 Cytochrome C oxidase subunit II, periplasmic domain U876_06790 PF06481 COX Aromatic Rich Motif U876_06795 PF00115 Cytochrome C and Quinol oxidase polypeptide I U876_06800 PF00510 Cytochrome c oxidase subunit III U876_06805 PF03626 Prokaryotic Cytochrome C oxidase subunit IV U876_06810 PF01040 UbiA prenyltransferase family U876_06815 PF07690 Major Facilitator Superfamily U876_06825 PF02668 Taurine catabolism dioxygenase TauD, TfdA family U876_06830 PF00528 Binding-protein-dependent transport system inner membrane component U876_06835 PF00005 ABC transporter U876_06840 PF04069 Substrate binding domain of ABC-type glycine betaine transport system U876_06850 PF07670 Nucleoside recognition U876_06850 PF07662 Na+ dependent nucleoside transporter C-terminus U876_06850 PF01773 Na+ dependent nucleoside transporter N-terminus U876_06875 PF04307 LexA-binding, inner membrane-associated putative hydrolase U876_06885 PF00290 Tryptophan synthase alpha chain U876_06890 PF00291 Pyridoxal-phosphate dependent enzyme U876_06895 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase U876_06895 PF00218 Indole-3-glycerol phosphate synthase U876_06900 PF00591 Glycosyl transferase family, a/b domain U876_06900 PF02885 Glycosyl transferase family, helical bundle domain U876_06905 PF00117 Glutamine amidotransferase class-I U876_06905 PF00591 Glycosyl transferase family, a/b domain U876_06905 PF02885 Glycosyl transferase family, helical bundle domain U876_06910 PF04715 Anthranilate synthase component I, N terminal region U876_06910 PF00425 chorismate binding enzyme U876_06915 PF02811 PHP domain U876_06920 PF01300 Telomere recombination U876_06925 PF02616 Segregation and condensation protein ScpA U876_06930 PF04079 Segregation and condensation complex subunit ScpB U876_06935 PF00849 RNA pseudouridylate synthase U876_06935 PF01479 S4 domain U876_06960 PF08361 MAATS-type transcriptional repressor, C-terminal region U876_06960 PF00440 Bacterial regulatory proteins, tetR family U876_06965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion U876_06965 PF00529 HlyD membrane-fusion protein of T1SS U876_06970 PF00873 AcrB/AcrD/AcrF family U876_06975 PF02321 Outer membrane efflux protein U876_06980 PF16363 GDP-mannose 4,6 dehydratase U876_06985 PF04321 RmlD substrate binding domain U876_06990 PF00483 Nucleotidyl transferase U876_06995 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase U876_07020 PF01370 NAD dependent epimerase/dehydratase family U876_07025 PF00953 Glycosyl transferase family 4 U876_07030 PF02719 Polysaccharide biosynthesis protein U876_07035 PF00953 Glycosyl transferase family 4 U876_07045 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain U876_07045 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain U876_07045 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain U876_07055 PF02719 Polysaccharide biosynthesis protein U876_07055 PF08485 Polysaccharide biosynthesis protein C-terminal U876_07060 PF04321 RmlD substrate binding domain U876_07065 PF02350 UDP-N-acetylglucosamine 2-epimerase U876_07075 PF10531 SLBB domain U876_07075 PF18412 Outer-membrane lipoprotein Wza C-terminal domain U876_07075 PF02563 Polysaccharide biosynthesis/export protein U876_07085 PF02706 Chain length determinant protein U876_07085 PF13807 G-rich domain on putative tyrosine kinase U876_07085 PF13614 AAA domain U876_07095 PF06082 Exopolysaccharide biosynthesis protein YbjH U876_07105 PF04337 Protein of unknown function, DUF480 U876_07110 PF00271 Helicase conserved C-terminal domain U876_07110 PF04434 SWIM zinc finger U876_07110 PF00176 SNF2 family N-terminal domain U876_07115 PF05472 DNA replication terminus site-binding protein (Ter protein) U876_07125 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family U876_07130 PF00676 Dehydrogenase E1 component U876_07135 PF02779 Transketolase, pyrimidine binding domain U876_07135 PF02780 Transketolase, C-terminal domain U876_07140 PF02817 e3 binding domain U876_07140 PF00364 Biotin-requiring enzyme U876_07140 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) U876_07145 PF00313 'Cold-shock' DNA-binding domain U876_07170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle U876_07175 PF00892 EamA-like transporter family U876_07180 PF00455 DeoR C terminal sensor domain U876_07180 PF08220 DeoR-like helix-turn-helix domain U876_07190 PF04055 Radical SAM superfamily U876_07195 PF00923 Transaldolase/Fructose-6-phosphate aldolase U876_07205 PF11871 Domain of unknown function (DUF3391) U876_07205 PF01966 HD domain U876_07210 PF00849 RNA pseudouridylate synthase U876_07210 PF01479 S4 domain U876_07220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle U876_07225 PF12850 Calcineurin-like phosphoesterase superfamily domain U876_07240 PF13144 Chaperone for flagella basal body P-ring formation U876_07245 PF00072 Response regulator receiver domain U876_07245 PF01584 CheW-like domain U876_07250 PF01739 CheR methyltransferase, SAM binding domain U876_07250 PF03705 CheR methyltransferase, all-alpha domain U876_07255 PF00460 Flagella basal body rod protein U876_07260 PF00460 Flagella basal body rod protein U876_07260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal U876_07270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal U876_07270 PF00460 Flagella basal body rod protein U876_07270 PF07559 Flagellar basal body protein FlaE U876_07275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal U876_07275 PF00460 Flagella basal body rod protein U876_07280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal U876_07280 PF00460 Flagella basal body rod protein U876_07285 PF02107 Flagellar L-ring protein U876_07290 PF02119 Flagellar P-ring protein U876_07295 PF10135 Rod binding protein U876_07295 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase U876_07300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal U876_07300 PF00460 Flagella basal body rod protein U876_07305 PF00669 Bacterial flagellin N-terminal helical region U876_07310 PF03448 MgtE intracellular N domain U876_07310 PF01769 Divalent cation transporter U876_07310 PF00571 CBS domain U876_07315 PF02541 Ppx/GppA phosphatase family U876_07320 PF02503 Polyphosphate kinase middle domain U876_07320 PF13090 Polyphosphate kinase C-terminal domain 2 U876_07320 PF13089 Polyphosphate kinase N-terminal domain U876_07320 PF17941 Polyphosphate kinase C-terminal domain 1 U876_07325 PF01842 ACT domain U876_07335 PF00072 Response regulator receiver domain U876_07335 PF02954 Bacterial regulatory protein, Fis family U876_07335 PF00158 Sigma-54 interaction domain U876_07340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_07340 PF00512 His Kinase A (phospho-acceptor) domain U876_07340 PF00989 PAS fold U876_07345 PF02954 Bacterial regulatory protein, Fis family U876_07345 PF00158 Sigma-54 interaction domain U876_07350 PF01784 NIF3 (NGG1p interacting factor 3) U876_07355 PF00551 Formyl transferase U876_07360 PF00586 AIR synthase related protein, N-terminal domain U876_07360 PF02769 AIR synthase related protein, C-terminal domain U876_07375 PF00308 Bacterial dnaA protein U876_07380 PF00463 Isocitrate lyase family U876_07385 PF01274 Malate synthase U876_07400 PF14437 MafB19-like deaminase U876_07405 PF00528 Binding-protein-dependent transport system inner membrane component U876_07410 PF00528 Binding-protein-dependent transport system inner membrane component U876_07425 PF01895 PhoU domain U876_07430 PF01595 Cyclin M transmembrane N-terminal domain U876_07430 PF03471 Transporter associated domain U876_07430 PF00571 CBS domain U876_07440 PF02965 Vitamin B12 dependent methionine synthase, activation domain U876_07440 PF02607 B12 binding domain U876_07440 PF02574 Homocysteine S-methyltransferase U876_07440 PF00809 Pterin binding enzyme U876_07440 PF02310 B12 binding domain U876_07445 PF13520 Amino acid permease U876_07450 PF04116 Fatty acid hydroxylase superfamily U876_07460 PF00005 ABC transporter U876_07465 PF00528 Binding-protein-dependent transport system inner membrane component U876_07470 PF00497 Bacterial extracellular solute-binding proteins, family 3 U876_07475 PF08448 PAS fold U876_07475 PF00990 Diguanylate cyclase, GGDEF domain U876_07480 PF07690 Major Facilitator Superfamily U876_07485 PF05231 MASE1 U876_07485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_07485 PF07730 Histidine kinase U876_07490 PF00196 Bacterial regulatory proteins, luxR family U876_07490 PF00072 Response regulator receiver domain U876_07495 PF01272 Transcription elongation factor, GreA/GreB, C-term U876_07495 PF14760 Rnk N-terminus U876_07515 PF00245 Alkaline phosphatase U876_07520 PF00245 Alkaline phosphatase U876_07525 PF01926 50S ribosome-binding GTPase U876_07530 PF07690 Major Facilitator Superfamily U876_07535 PF00850 Histone deacetylase domain U876_07545 PF13307 Helicase C-terminal domain U876_07545 PF06733 DEAD_2 U876_07550 PF13609 Gram-negative porin U876_07560 PF00155 Aminotransferase class I and II U876_07565 PF05872 Bacterial protein of unknown function (DUF853) U876_07670 PF00816 H-NS histone family U876_07710 PF00664 ABC transporter transmembrane region U876_07710 PF00005 ABC transporter U876_07715 PF02606 Tetraacyldisaccharide-1-P 4'-kinase U876_07720 PF03966 Trm112p-like protein U876_07725 PF02348 Cytidylyltransferase U876_07730 PF00196 Bacterial regulatory proteins, luxR family U876_07730 PF00072 Response regulator receiver domain U876_07735 PF01541 GIY-YIG catalytic domain U876_07735 PF02151 UvrB/uvrC motif U876_07735 PF08459 UvrC Helix-hairpin-helix N-terminal U876_07740 PF01066 CDP-alcohol phosphatidyltransferase U876_07760 PF00589 Phage integrase family U876_07760 PF13356 Arm DNA-binding domain U876_07785 PF03050 Transposase IS66 family U876_07785 PF13005 zinc-finger binding domain of transposase IS66 U876_07785 PF13007 Transposase C of IS166 homeodomain U876_07785 PF13817 IS66 C-terminal element U876_07795 PF00171 Aldehyde dehydrogenase family U876_07805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain U876_07805 PF00205 Thiamine pyrophosphate enzyme, central domain U876_07805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain U876_07820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold U876_07820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain U876_07825 PF13407 Periplasmic binding protein domain U876_07830 PF00005 ABC transporter U876_07835 PF02653 Branched-chain amino acid transport system / permease component U876_07840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain U876_07840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold U876_07845 PF00294 pfkB family carbohydrate kinase U876_07850 PF01261 Xylose isomerase-like TIM barrel U876_07855 PF04962 KduI/IolB family U876_07865 PF01527 Transposase U876_07870 PF13276 HTH-like domain U876_07870 PF00665 Integrase core domain U876_07905 PF01757 Acyltransferase family U876_07915 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB U876_07920 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) U876_07940 PF00037 4Fe-4S binding domain U876_07940 PF13247 4Fe-4S dicluster domain U876_07945 PF03916 Polysulphide reductase, NrfD U876_07950 PF00149 Calcineurin-like phosphoesterase U876_07960 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD U876_07965 PF01406 tRNA synthetases class I (C) catalytic domain U876_07965 PF09190 DALR domain U876_07985 PF00990 Diguanylate cyclase, GGDEF domain U876_07985 PF13185 GAF domain U876_08015 PF01169 Uncharacterized protein family UPF0016 U876_08020 PF01253 Translation initiation factor SUI1 U876_08030 PF02421 Ferrous iron transport protein B U876_08030 PF07670 Nucleoside recognition U876_08030 PF07664 Ferrous iron transport protein B C terminus U876_08045 PF00483 Nucleotidyl transferase U876_08050 PF00437 Type II/IV secretion system protein U876_08060 PF00497 Bacterial extracellular solute-binding proteins, family 3 U876_08060 PF00072 Response regulator receiver domain U876_08060 PF01627 Hpt domain U876_08060 PF00989 PAS fold U876_08060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_08060 PF00512 His Kinase A (phospho-acceptor) domain U876_08065 PF01032 FecCD transport family U876_08070 PF00005 ABC transporter U876_08075 PF00583 Acetyltransferase (GNAT) family U876_08080 PF00793 DAHP synthetase I family U876_08085 PF01219 Prokaryotic diacylglycerol kinase U876_08090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain U876_08090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain U876_08090 PF01842 ACT domain U876_08095 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) U876_08100 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) U876_08105 PF01812 5-formyltetrahydrofolate cyclo-ligase family U876_08115 PF05173 Dihydrodipicolinate reductase, C-terminus U876_08115 PF01113 Dihydrodipicolinate reductase, N-terminus U876_08120 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain U876_08120 PF00117 Glutamine amidotransferase class-I U876_08125 PF02142 MGS-like domain U876_08125 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain U876_08125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain U876_08130 PF08502 LeuA allosteric (dimerisation) domain U876_08130 PF00682 HMGL-like U876_08135 PF07759 Protein of unknown function (DUF1615) U876_08160 PF13302 Acetyltransferase (GNAT) domain U876_08165 PF00270 DEAD/DEAH box helicase U876_08165 PF00271 Helicase conserved C-terminal domain U876_08175 PF14521 Lysine-specific metallo-endopeptidase U876_08190 PF00376 MerR family regulatory protein U876_08190 PF09278 MerR, DNA binding U876_08205 PF00497 Bacterial extracellular solute-binding proteins, family 3 U876_08210 PF00528 Binding-protein-dependent transport system inner membrane component U876_08220 PF07992 Pyridine nucleotide-disulphide oxidoreductase U876_08220 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster U876_08225 PF00310 Glutamine amidotransferases class-II U876_08225 PF04898 Glutamate synthase central domain U876_08225 PF01645 Conserved region in glutamate synthase U876_08225 PF01493 GXGXG motif U876_08230 PF16199 Radical_SAM C-terminal domain U876_08230 PF04055 Radical SAM superfamily U876_08235 PF00005 ABC transporter U876_08235 PF00664 ABC transporter transmembrane region U876_08235 PF03412 Peptidase C39 family U876_08280 PF00324 Amino acid permease U876_08290 PF03618 Kinase/pyrophosphorylase U876_08295 PF02896 PEP-utilising enzyme, TIM barrel domain U876_08295 PF00391 PEP-utilising enzyme, mobile domain U876_08295 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain U876_08305 PF00933 Glycosyl hydrolase family 3 N terminal domain U876_08305 PF14310 Fibronectin type III-like domain U876_08305 PF01915 Glycosyl hydrolase family 3 C-terminal domain U876_08315 PF01483 Proprotein convertase P-domain U876_08315 PF00082 Subtilase family U876_08345 PF07969 Amidohydrolase family U876_08350 PF03180 NLPA lipoprotein U876_08355 PF01569 PAP2 superfamily U876_08360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain U876_08360 PF11890 Domain of unknown function (DUF3410) U876_08360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain U876_08365 PF02774 Semialdehyde dehydrogenase, dimerisation domain U876_08365 PF01118 Semialdehyde dehydrogenase, NAD binding domain U876_08375 PF01416 tRNA pseudouridine synthase U876_08380 PF01039 Carboxyl transferase domain U876_08380 PF17848 Acetyl-coA carboxylase zinc finger domain U876_08385 PF02875 Mur ligase family, glutamate ligase domain U876_08385 PF08245 Mur ligase middle domain U876_08390 PF05036 Sporulation related domain U876_08395 PF04358 DsrC like protein U876_08400 PF12805 FUSC-like inner membrane protein yccS U876_08405 PF01027 Inhibitor of apoptosis-promoting Bax1 U876_08425 PF08019 Phosphoethanolamine transferase EptA/EptB U876_08425 PF00884 Sulfatase U876_08435 PF09924 Uncharacterised conserved protein (DUF2156) U876_08435 PF03706 Lysylphosphatidylglycerol synthase TM region U876_08445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_08445 PF08447 PAS fold U876_08450 PF00563 EAL domain U876_08450 PF00990 Diguanylate cyclase, GGDEF domain U876_08450 PF13426 PAS domain U876_08455 PF00849 RNA pseudouridylate synthase U876_08465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily U876_08470 PF04209 homogentisate 1,2-dioxygenase U876_08480 PF02798 Glutathione S-transferase, N-terminal domain U876_08480 PF14497 Glutathione S-transferase, C-terminal domain U876_08485 PF13417 Glutathione S-transferase, N-terminal domain U876_08485 PF00043 Glutathione S-transferase, C-terminal domain U876_08495 PF13537 Glutamine amidotransferase domain U876_08495 PF00733 Asparagine synthase U876_08505 PF00999 Sodium/hydrogen exchanger family U876_08505 PF02254 TrkA-N domain U876_08510 PF13344 Haloacid dehalogenase-like hydrolase U876_08515 PF00962 Adenosine/AMP deaminase U876_08520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family U876_08525 PF03471 Transporter associated domain U876_08525 PF03741 Integral membrane protein TerC family U876_08535 PF13183 4Fe-4S dicluster domain U876_08535 PF02913 FAD linked oxidases, C-terminal domain U876_08535 PF01565 FAD binding domain U876_08545 PF03061 Thioesterase superfamily U876_08550 PF03880 DbpA RNA binding domain U876_08550 PF00271 Helicase conserved C-terminal domain U876_08550 PF00270 DEAD/DEAH box helicase U876_08555 PF13726 Na+-H+ antiporter family U876_08555 PF03553 Na+/H+ antiporter family U876_08560 PF00929 Exonuclease U876_08565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_08565 PF00672 HAMP domain U876_08565 PF12729 Four helix bundle sensory module for signal transduction U876_08570 PF18393 MotY N-terminal domain U876_08570 PF00691 OmpA family U876_08575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily U876_08580 PF00730 HhH-GPD superfamily base excision DNA repair protein U876_08580 PF00633 Helix-hairpin-helix motif U876_08580 PF10576 Iron-sulfur binding domain of endonuclease III U876_08585 PF02508 Rnf-Nqr subunit, membrane protein U876_08590 PF04205 FMN-binding domain U876_08595 PF03116 NQR2, RnfD, RnfE family U876_08600 PF12838 4Fe-4S dicluster domain U876_08600 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit U876_08600 PF13375 RnfC Barrel sandwich hybrid domain U876_08600 PF10531 SLBB domain U876_08605 PF04060 Putative Fe-S cluster U876_08610 PF02508 Rnf-Nqr subunit, membrane protein U876_08615 PF00892 EamA-like transporter family U876_08625 PF08447 PAS fold U876_08625 PF13426 PAS domain U876_08625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_08630 PF12241 Trans-2-enoyl-CoA reductase catalytic region U876_08630 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase U876_08630 PF07055 Enoyl reductase FAD binding domain U876_08635 PF03606 C4-dicarboxylate anaerobic carrier U876_08640 PF00155 Aminotransferase class I and II U876_08650 PF00462 Glutaredoxin U876_08655 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family U876_08660 PF00271 Helicase conserved C-terminal domain U876_08660 PF04851 Type III restriction enzyme, res subunit U876_08665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion U876_08665 PF00529 HlyD membrane-fusion protein of T1SS U876_08675 PF02554 Carbon starvation protein CstA U876_08680 PF04397 LytTr DNA-binding domain U876_08680 PF00072 Response regulator receiver domain U876_08685 PF06580 Histidine kinase U876_08685 PF07694 5TMR of 5TMR-LYT U876_08690 PF01966 HD domain U876_08695 PF00171 Aldehyde dehydrogenase family U876_08695 PF00465 Iron-containing alcohol dehydrogenase U876_08705 PF01914 MarC family integral membrane protein U876_08710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle U876_08715 PF00528 Binding-protein-dependent transport system inner membrane component U876_08720 PF00528 Binding-protein-dependent transport system inner membrane component U876_08720 PF12911 N-terminal TM domain of oligopeptide transport permease C U876_08725 PF00005 ABC transporter U876_08725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region U876_08735 PF00005 ABC transporter U876_08735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region U876_08740 PF03741 Integral membrane protein TerC family U876_08745 PF00842 Alanine racemase, C-terminal domain U876_08745 PF01168 Alanine racemase, N-terminal domain U876_08755 PF00375 Sodium:dicarboxylate symporter family U876_08770 PF01979 Amidohydrolase family U876_08775 PF12167 Arm DNA-binding domain U876_08775 PF00589 Phage integrase family U876_08820 PF04381 Putative exonuclease, RdgC U876_08855 PF06630 Enterobacterial exodeoxyribonuclease VIII U876_08855 PF12684 PDDEXK-like domain of unknown function (DUF3799) U876_08960 PF05772 NinB protein U876_08990 PF11798 IMS family HHH motif U876_08990 PF11799 impB/mucB/samB family C-terminal domain U876_08990 PF13438 Domain of unknown function (DUF4113) U876_08990 PF00817 impB/mucB/samB family U876_08995 PF00717 Peptidase S24-like U876_09180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_09180 PF00672 HAMP domain U876_09185 PF01230 HIT domain U876_09220 PF07549 SecD/SecF GG Motif U876_09220 PF13721 SecD export protein N-terminal TM region U876_09220 PF02355 Protein export membrane protein U876_09225 PF07549 SecD/SecF GG Motif U876_09225 PF02355 Protein export membrane protein U876_09235 PF05661 Protein of unknown function (DUF808) U876_09240 PF08439 Oligopeptidase F U876_09240 PF01432 Peptidase family M3 U876_09245 PF08439 Oligopeptidase F U876_09245 PF01432 Peptidase family M3 U876_09250 PF00860 Permease family U876_09255 PF05728 Uncharacterised protein family (UPF0227) U876_09260 PF07992 Pyridine nucleotide-disulphide oxidoreductase U876_09280 PF01906 Putative heavy-metal-binding U876_09290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases U876_09290 PF14824 Sirohaem biosynthesis protein central U876_09290 PF10414 Sirohaem synthase dimerisation region U876_09295 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain U876_09295 PF01077 Nitrite and sulphite reductase 4Fe-4S domain U876_09295 PF13187 4Fe-4S dicluster domain U876_09300 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B U876_09300 PF00175 Oxidoreductase NAD-binding domain U876_09305 PF17179 4Fe-4S dicluster domain U876_09310 PF01734 Patatin-like phospholipase U876_09315 PF17676 LD-carboxypeptidase C-terminal domain U876_09315 PF02016 LD-carboxypeptidase N-terminal domain U876_09320 PF00884 Sulfatase U876_09330 PF00696 Amino acid kinase family U876_09330 PF01842 ACT domain U876_09335 PF00583 Acetyltransferase (GNAT) family U876_09335 PF00696 Amino acid kinase family U876_09340 PF01625 Peptide methionine sulfoxide reductase U876_09365 PF00561 alpha/beta hydrolase fold U876_09370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily U876_09380 PF03466 LysR substrate binding domain U876_09380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_09385 PF02652 L-lactate permease U876_09390 PF02754 Cysteine-rich domain U876_09395 PF02589 LUD domain U876_09395 PF13183 4Fe-4S dicluster domain U876_09395 PF11870 Domain of unknown function (DUF3390) U876_09400 PF02589 LUD domain U876_09405 PF01565 FAD binding domain U876_09405 PF02913 FAD linked oxidases, C-terminal domain U876_09420 PF00005 ABC transporter U876_09430 PF07690 Major Facilitator Superfamily U876_09445 PF01593 Flavin containing amine oxidoreductase U876_09450 PF03239 Iron permease FTR1 family U876_09465 PF03350 Uncharacterized protein family, UPF0114 U876_09480 PF00916 Sulfate permease family U876_09480 PF01740 STAS domain U876_09535 PF01527 Transposase U876_09545 PF01527 Transposase U876_09550 PF13333 Integrase core domain U876_09550 PF00665 Integrase core domain U876_09550 PF13276 HTH-like domain U876_09565 PF01168 Alanine racemase, N-terminal domain U876_09565 PF00842 Alanine racemase, C-terminal domain U876_09570 PF12729 Four helix bundle sensory module for signal transduction U876_09570 PF00672 HAMP domain U876_09570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_09575 PF03707 Bacterial signalling protein N terminal repeat U876_09575 PF00990 Diguanylate cyclase, GGDEF domain U876_09575 PF00563 EAL domain U876_09580 PF00072 Response regulator receiver domain U876_09580 PF01339 CheB methylesterase U876_09585 PF01739 CheR methyltransferase, SAM binding domain U876_09585 PF03705 CheR methyltransferase, all-alpha domain U876_09590 PF01584 CheW-like domain U876_09595 PF17202 Single cache domain 3 U876_09595 PF00672 HAMP domain U876_09595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_09600 PF02895 Signal transducing histidine kinase, homodimeric domain U876_09600 PF09078 CheY binding U876_09600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_09600 PF01584 CheW-like domain U876_09600 PF01627 Hpt domain U876_09610 PF00072 Response regulator receiver domain U876_09615 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal U876_09615 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit U876_09620 PF13247 4Fe-4S dicluster domain U876_09625 PF03916 Polysulphide reductase, NrfD U876_09630 PF00374 Nickel-dependent hydrogenase U876_09635 PF01750 Hydrogenase maturation protease U876_09640 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE U876_09645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle U876_09650 PF00528 Binding-protein-dependent transport system inner membrane component U876_09655 PF12911 N-terminal TM domain of oligopeptide transport permease C U876_09655 PF00528 Binding-protein-dependent transport system inner membrane component U876_09660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region U876_09660 PF00005 ABC transporter U876_09665 PF00005 ABC transporter U876_09665 PF08402 TOBE domain U876_09670 PF02492 CobW/HypB/UreG, nucleotide-binding domain U876_09675 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA U876_09680 PF02769 AIR synthase related protein, C-terminal domain U876_09680 PF00586 AIR synthase related protein, N-terminal domain U876_09685 PF01924 Hydrogenase formation hypA family U876_09690 PF01455 HupF/HypC family U876_09695 PF01300 Telomere recombination U876_09695 PF17788 HypF Kae1-like domain U876_09695 PF00708 Acylphosphatase U876_09695 PF07503 HypF finger U876_09700 PF03144 Elongation factor Tu domain 2 U876_09700 PF09105 Elongation factor SelB, winged helix U876_09700 PF09107 Elongation factor SelB, winged helix U876_09700 PF00009 Elongation factor Tu GTP binding domain U876_09700 PF09106 Elongation factor SelB, winged helix U876_09705 PF12390 Selenocysteine synthase N terminal U876_09705 PF03841 L-seryl-tRNA selenium transferase U876_09715 PF01750 Hydrogenase maturation protease U876_09720 PF07450 Formate hydrogenlyase maturation protein HycH U876_09725 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit U876_09730 PF12838 4Fe-4S dicluster domain U876_09735 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit U876_09735 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit U876_09735 PF00374 Nickel-dependent hydrogenase U876_09740 PF00146 NADH dehydrogenase U876_09745 PF00361 Proton-conducting membrane transporter U876_09750 PF12798 4Fe-4S binding domain U876_09750 PF00037 4Fe-4S binding domain U876_09755 PF02705 K+ potassium transporter U876_09765 PF12800 4Fe-4S binding domain U876_09765 PF13247 4Fe-4S dicluster domain U876_09770 PF00384 Molybdopterin oxidoreductase U876_09770 PF01568 Molydopterin dinucleotide binding domain U876_09770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain U876_09775 PF00384 Molybdopterin oxidoreductase U876_09775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain U876_09775 PF01568 Molydopterin dinucleotide binding domain U876_09785 PF00158 Sigma-54 interaction domain U876_09785 PF01590 GAF domain U876_09785 PF02954 Bacterial regulatory protein, Fis family U876_09790 PF02634 FdhD/NarQ family U876_09795 PF13662 Toprim domain U876_09795 PF02132 RecR protein U876_09800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_09800 PF00183 Hsp90 protein U876_09805 PF05191 Adenylate kinase, active site lid U876_09810 PF00762 Ferrochelatase U876_09820 PF00294 pfkB family carbohydrate kinase U876_09835 PF00563 EAL domain U876_09835 PF00990 Diguanylate cyclase, GGDEF domain U876_09835 PF03707 Bacterial signalling protein N terminal repeat U876_09840 PF00483 Nucleotidyl transferase U876_09850 PF07273 Protein of unknown function (DUF1439) U876_09855 PF00425 chorismate binding enzyme U876_09860 PF00501 AMP-binding enzyme U876_09860 PF13193 AMP-binding enzyme C-terminal domain U876_09865 PF00857 Isochorismatase family U876_09865 PF00550 Phosphopantetheine attachment site U876_09870 PF00550 Phosphopantetheine attachment site U876_09870 PF00975 Thioesterase domain U876_09870 PF00668 Condensation domain U876_09870 PF13193 AMP-binding enzyme C-terminal domain U876_09870 PF00501 AMP-binding enzyme U876_09880 PF13193 AMP-binding enzyme C-terminal domain U876_09880 PF07993 Male sterility protein U876_09880 PF00501 AMP-binding enzyme U876_09880 PF00550 Phosphopantetheine attachment site U876_09880 PF00668 Condensation domain U876_09885 PF13193 AMP-binding enzyme C-terminal domain U876_09885 PF00501 AMP-binding enzyme U876_09885 PF00668 Condensation domain U876_09885 PF00550 Phosphopantetheine attachment site U876_09885 PF00975 Thioesterase domain U876_09890 PF01497 Periplasmic binding protein U876_09895 PF01648 4'-phosphopantetheinyl transferase superfamily U876_09895 PF17837 4'-phosphopantetheinyl transferase N-terminal domain U876_09900 PF00005 ABC transporter U876_09905 PF01032 FecCD transport family U876_09910 PF01032 FecCD transport family U876_09915 PF00593 TonB dependent receptor U876_09915 PF07715 TonB-dependent Receptor Plug Domain U876_09930 PF11143 Protein of unknown function (DUF2919) U876_09935 PF01544 CorA-like Mg2+ transporter protein U876_09945 PF01012 Electron transfer flavoprotein domain U876_09955 PF00766 Electron transfer flavoprotein FAD-binding domain U876_09955 PF01012 Electron transfer flavoprotein domain U876_09960 PF00266 Aminotransferase class-V U876_09965 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) U876_09970 PF00793 DAHP synthetase I family U876_09975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_09975 PF00672 HAMP domain U876_09980 PF04055 Radical SAM superfamily U876_09985 PF02601 Exonuclease VII, large subunit U876_09985 PF13742 OB-fold nucleic acid binding domain U876_09990 PF00892 EamA-like transporter family U876_09995 PF02472 Biopolymer transport protein ExbD/TolR U876_10000 PF01618 MotA/TolQ/ExbB proton channel family U876_10010 PF02705 K+ potassium transporter U876_10015 PF00571 CBS domain U876_10015 PF00478 IMP dehydrogenase / GMP reductase domain U876_10020 PF00117 Glutamine amidotransferase class-I U876_10020 PF02540 NAD synthase U876_10020 PF00958 GMP synthase C terminal domain U876_10025 PF00589 Phage integrase family U876_10025 PF13356 Arm DNA-binding domain U876_10090 PF02805 Metal binding domain of Ada U876_10090 PF12833 Helix-turn-helix domain U876_10090 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain U876_10090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain U876_10105 PF05724 Thiopurine S-methyltransferase (TPMT) U876_10110 PF00675 Insulinase (Peptidase family M16) U876_10110 PF05193 Peptidase M16 inactive domain U876_10115 PF00300 Histidine phosphatase superfamily (branch 1) U876_10125 PF00892 EamA-like transporter family U876_10130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle U876_10135 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain U876_10140 PF17757 UvrB interaction domain U876_10140 PF00270 DEAD/DEAH box helicase U876_10140 PF00271 Helicase conserved C-terminal domain U876_10140 PF02559 CarD-like/TRCF domain U876_10140 PF03461 TRCF domain U876_10150 PF02687 FtsX-like permease family U876_10150 PF12704 MacB-like periplasmic core domain U876_10155 PF00005 ABC transporter U876_10160 PF02687 FtsX-like permease family U876_10160 PF12704 MacB-like periplasmic core domain U876_10175 PF05697 Bacterial trigger factor protein (TF) U876_10175 PF05698 Bacterial trigger factor protein (TF) C-terminus U876_10175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase U876_10180 PF00574 Clp protease U876_10185 PF06689 ClpX C4-type zinc finger U876_10185 PF10431 C-terminal, D2-small domain, of ClpB protein U876_10185 PF07724 AAA domain (Cdc48 subfamily) U876_10190 PF00004 ATPase family associated with various cellular activities (AAA) U876_10190 PF05362 Lon protease (S16) C-terminal proteolytic domain U876_10190 PF02190 ATP-dependent protease La (LON) substrate-binding domain U876_10195 PF00216 Bacterial DNA-binding protein U876_10200 PF13145 PPIC-type PPIASE domain U876_10205 PF12848 ABC transporter U876_10205 PF00005 ABC transporter U876_10210 PF00474 Sodium:solute symporter family U876_10215 PF04341 Protein of unknown function, DUF485 U876_10230 PF00378 Enoyl-CoA hydratase/isomerase U876_10275 PF01235 Sodium:alanine symporter family U876_10285 PF06167 Glucose-regulated metallo-peptidase M90 U876_10290 PF01184 GPR1/FUN34/yaaH family U876_10310 PF00376 MerR family regulatory protein U876_10310 PF09278 MerR, DNA binding U876_10315 PF00682 HMGL-like U876_10320 PF02785 Biotin carboxylase C-terminal domain U876_10320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain U876_10320 PF00364 Biotin-requiring enzyme U876_10320 PF00289 Biotin carboxylase, N-terminal domain U876_10325 PF00378 Enoyl-CoA hydratase/isomerase U876_10330 PF01039 Carboxyl transferase domain U876_10335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain U876_10335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain U876_10335 PF02770 Acyl-CoA dehydrogenase, middle domain U876_10340 PF00171 Aldehyde dehydrogenase family U876_10345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain U876_10345 PF02770 Acyl-CoA dehydrogenase, middle domain U876_10345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain U876_10350 PF00378 Enoyl-CoA hydratase/isomerase U876_10355 PF00378 Enoyl-CoA hydratase/isomerase U876_10360 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase U876_10360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase U876_10370 PF13520 Amino acid permease U876_10375 PF01925 Sulfite exporter TauE/SafE U876_10400 PF08448 PAS fold U876_10400 PF00990 Diguanylate cyclase, GGDEF domain U876_10400 PF00563 EAL domain U876_10425 PF04002 RadC-like JAB domain U876_10445 PF02796 Helix-turn-helix domain of resolvase U876_10445 PF00239 Resolvase, N terminal domain U876_10455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_10455 PF03466 LysR substrate binding domain U876_10460 PF12146 Serine aminopeptidase, S33 U876_10465 PF00326 Prolyl oligopeptidase family U876_10465 PF07676 WD40-like Beta Propeller Repeat U876_10465 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region U876_10475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_10475 PF03466 LysR substrate binding domain U876_10480 PF00248 Aldo/keto reductase family U876_10490 PF00248 Aldo/keto reductase family U876_10495 PF00990 Diguanylate cyclase, GGDEF domain U876_10495 PF07694 5TMR of 5TMR-LYT U876_10500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_10500 PF03466 LysR substrate binding domain U876_10505 PF00232 Glycosyl hydrolase family 1 U876_10510 PF00990 Diguanylate cyclase, GGDEF domain U876_10510 PF03707 Bacterial signalling protein N terminal repeat U876_10510 PF13188 PAS domain U876_10510 PF00563 EAL domain U876_10525 PF01966 HD domain U876_10535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_10535 PF03466 LysR substrate binding domain U876_10540 PF01261 Xylose isomerase-like TIM barrel U876_10545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain U876_10545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold U876_10550 PF03466 LysR substrate binding domain U876_10550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_10560 PF03279 Bacterial lipid A biosynthesis acyltransferase U876_10565 PF03279 Bacterial lipid A biosynthesis acyltransferase U876_10580 PF17151 Periplasmic sensor domain U876_10580 PF00990 Diguanylate cyclase, GGDEF domain U876_10590 PF03104 DNA polymerase family B, exonuclease domain U876_10590 PF00136 DNA polymerase family B U876_10620 PF01554 MatE U876_10625 PF06786 Uncharacterised protein family (UPF0253) U876_10630 PF00677 Lumazine binding domain U876_10640 PF13419 Haloacid dehalogenase-like hydrolase U876_10645 PF01370 NAD dependent epimerase/dehydratase family U876_10645 PF02222 ATP-grasp domain U876_10650 PF00892 EamA-like transporter family U876_10655 PF02525 Flavodoxin-like fold U876_10680 PF17783 CvfB-like winged helix domain U876_10680 PF13509 S1 domain U876_10690 PF04269 Protein of unknown function, DUF440 U876_10695 PF00912 Transglycosylase U876_10700 PF04269 Protein of unknown function, DUF440 U876_10705 PF03776 Septum formation topological specificity factor MinE U876_10710 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain U876_10715 PF05209 Septum formation inhibitor MinC, N-terminal domain U876_10715 PF03775 Septum formation inhibitor MinC, C-terminal domain U876_10720 PF05166 YcgL domain U876_10725 PF13406 Transglycosylase SLT domain U876_10730 PF03313 Serine dehydratase alpha chain U876_10730 PF03315 Serine dehydratase beta chain U876_10735 PF03313 Serine dehydratase alpha chain U876_10735 PF03315 Serine dehydratase beta chain U876_10740 PF06865 Pyrimidine/purine nucleoside phosphorylase U876_10745 PF00375 Sodium:dicarboxylate symporter family U876_10750 PF00376 MerR family regulatory protein U876_10750 PF09278 MerR, DNA binding U876_10755 PF00108 Thiolase, N-terminal domain U876_10755 PF02803 Thiolase, C-terminal domain U876_10760 PF00563 EAL domain U876_10760 PF08668 HDOD domain U876_10765 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) U876_10770 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) U876_10780 PF04542 Sigma-70 region 2 U876_10780 PF08281 Sigma-70, region 4 U876_10805 PF01882 Protein of unknown function DUF58 U876_10810 PF17863 AAA lid domain U876_10810 PF07726 ATPase family associated with various cellular activities (AAA) U876_10815 PF00108 Thiolase, N-terminal domain U876_10815 PF02803 Thiolase, C-terminal domain U876_10820 PF00378 Enoyl-CoA hydratase/isomerase U876_10820 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain U876_10820 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain U876_10830 PF07152 YaeQ protein U876_10840 PF06074 Protein of unknown function (DUF935) U876_10855 PF10123 Mu-like prophage I protein U876_10865 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain U876_10865 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain U876_10870 PF00291 Pyridoxal-phosphate dependent enzyme U876_10875 PF07687 Peptidase dimerisation domain U876_10875 PF01546 Peptidase family M20/M25/M40 U876_10880 PF01979 Amidohydrolase family U876_10885 PF00696 Amino acid kinase family U876_10895 PF00892 EamA-like transporter family U876_10900 PF13478 XdhC Rossmann domain U876_10900 PF02625 XdhC and CoxI family U876_10910 PF12804 MobA-like NTP transferase domain U876_10920 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster U876_10920 PF07992 Pyridine nucleotide-disulphide oxidoreductase U876_10925 PF01979 Amidohydrolase family U876_10930 PF00941 FAD binding domain in molybdopterin dehydrogenase U876_10935 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain U876_10935 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase U876_10935 PF01799 [2Fe-2S] binding domain U876_10940 PF00860 Permease family U876_10945 PF01979 Amidohydrolase family U876_10950 PF00860 Permease family U876_10955 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase U876_10955 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain U876_10960 PF03450 CO dehydrogenase flavoprotein C-terminal domain U876_10960 PF00941 FAD binding domain in molybdopterin dehydrogenase U876_10965 PF01799 [2Fe-2S] binding domain U876_10965 PF00111 2Fe-2S iron-sulfur cluster binding domain U876_10975 PF05433 Glycine zipper 2TM domain U876_10985 PF03606 C4-dicarboxylate anaerobic carrier U876_10990 PF13193 AMP-binding enzyme C-terminal domain U876_10990 PF00501 AMP-binding enzyme U876_10995 PF01502 Phosphoribosyl-AMP cyclohydrolase U876_10995 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase U876_11000 PF00977 Histidine biosynthesis protein U876_11005 PF00072 Response regulator receiver domain U876_11005 PF01627 Hpt domain U876_11005 PF00512 His Kinase A (phospho-acceptor) domain U876_11005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_11015 PF00072 Response regulator receiver domain U876_11020 PF00977 Histidine biosynthesis protein U876_11025 PF00117 Glutamine amidotransferase class-I U876_11030 PF08645 Polynucleotide kinase 3 phosphatase U876_11030 PF00475 Imidazoleglycerol-phosphate dehydratase U876_11035 PF00155 Aminotransferase class I and II U876_11040 PF00815 Histidinol dehydrogenase U876_11045 PF01634 ATP phosphoribosyltransferase U876_11045 PF08029 HisG, C-terminal domain U876_11055 PF13307 Helicase C-terminal domain U876_11055 PF04851 Type III restriction enzyme, res subunit U876_11060 PF00814 Glycoprotease family U876_11070 PF08241 Methyltransferase domain U876_11070 PF12697 Alpha/beta hydrolase family U876_11075 PF00501 AMP-binding enzyme U876_11075 PF13193 AMP-binding enzyme C-terminal domain U876_11080 PF01612 3'-5' exonuclease U876_11080 PF00570 HRDC domain U876_11085 PF00497 Bacterial extracellular solute-binding proteins, family 3 U876_11205 PF02796 Helix-turn-helix domain of resolvase U876_11205 PF00239 Resolvase, N terminal domain U876_11215 PF13408 Recombinase zinc beta ribbon domain U876_11215 PF07508 Recombinase U876_11215 PF00239 Resolvase, N terminal domain U876_11225 PF01207 Dihydrouridine synthase (Dus) U876_11230 PF04304 Protein of unknown function (DUF454) U876_11235 PF00156 Phosphoribosyl transferase domain U876_11240 PF12170 DNA polymerase III tau subunit V interacting with alpha U876_11240 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding U876_11240 PF12169 DNA polymerase III subunits gamma and tau domain III U876_11245 PF02575 YbaB/EbfC DNA-binding family U876_11250 PF12167 Arm DNA-binding domain U876_11250 PF00589 Phage integrase family U876_11280 PF06630 Enterobacterial exodeoxyribonuclease VIII U876_11280 PF12684 PDDEXK-like domain of unknown function (DUF3799) U876_11385 PF06628 Catalase-related immune-responsive U876_11385 PF00199 Catalase U876_11410 PF09669 Phage regulatory protein Rha (Phage_pRha) U876_11410 PF03374 Phage antirepressor protein KilAC domain U876_11415 PF05772 NinB protein U876_11430 PF01338 Bacillus thuringiensis toxin U876_11435 PF13438 Domain of unknown function (DUF4113) U876_11435 PF00817 impB/mucB/samB family U876_11435 PF11799 impB/mucB/samB family C-terminal domain U876_11435 PF11798 IMS family HHH motif U876_11440 PF00717 Peptidase S24-like U876_11455 PF00816 H-NS histone family U876_11610 PF00196 Bacterial regulatory proteins, luxR family U876_11610 PF00072 Response regulator receiver domain U876_11625 PF11898 Domain of unknown function (DUF3418) U876_11625 PF00271 Helicase conserved C-terminal domain U876_11625 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold U876_11625 PF00270 DEAD/DEAH box helicase U876_11625 PF04408 Helicase associated domain (HA2) U876_11640 PF00512 His Kinase A (phospho-acceptor) domain U876_11640 PF01627 Hpt domain U876_11640 PF00072 Response regulator receiver domain U876_11640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_11640 PF00672 HAMP domain U876_11640 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) U876_11645 PF00072 Response regulator receiver domain U876_11650 PF00753 Metallo-beta-lactamase superfamily U876_11660 PF02769 AIR synthase related protein, C-terminal domain U876_11660 PF00586 AIR synthase related protein, N-terminal domain U876_11685 PF17785 PUA-like domain U876_11685 PF10672 S-adenosylmethionine-dependent methyltransferase U876_11690 PF00672 HAMP domain U876_11690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_11690 PF12729 Four helix bundle sensory module for signal transduction U876_11695 PF00708 Acylphosphatase U876_11700 PF00043 Glutathione S-transferase, C-terminal domain U876_11700 PF02798 Glutathione S-transferase, N-terminal domain U876_11705 PF01588 Putative tRNA binding domain U876_11705 PF09334 tRNA synthetases class I (M) U876_11705 PF08264 Anticodon-binding domain of tRNA U876_11710 PF10609 NUBPL iron-transfer P-loop NTPase U876_11715 PF00485 Phosphoribulokinase / Uridine kinase family U876_11720 PF00692 dUTPase U876_11730 PF01384 Phosphate transporter family U876_11735 PF10150 Ribonuclease E/G family U876_11735 PF00575 S1 RNA binding domain U876_11735 PF12111 Polyribonucleotide phosphorylase C terminal U876_11740 PF00849 RNA pseudouridylate synthase U876_11740 PF01479 S4 domain U876_11750 PF02545 Maf-like protein U876_11755 PF07690 Major Facilitator Superfamily U876_11760 PF03466 LysR substrate binding domain U876_11760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_11770 PF02620 Large ribosomal RNA subunit accumulation protein YceD U876_11775 PF01783 Ribosomal L32p protein family U876_11780 PF02504 Fatty acid synthesis protein U876_11785 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III U876_11785 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal U876_11790 PF00698 Acyl transferase domain U876_11800 PF00550 Phosphopantetheine attachment site U876_11805 PF00109 Beta-ketoacyl synthase, N-terminal domain U876_11805 PF02801 Beta-ketoacyl synthase, C-terminal domain U876_11810 PF01063 Amino-transferase class IV U876_11815 PF02618 YceG-like family U876_11820 PF02223 Thymidylate kinase U876_11825 PF09115 DNA polymerase III, delta subunit, C terminal U876_11830 PF01026 TatD related DNase U876_11835 PF00589 Phage integrase family U876_11845 PF01189 16S rRNA methyltransferase RsmB/F U876_11845 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF U876_11845 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF U876_11850 PF02470 MlaD protein U876_11855 PF04403 Paraquat-inducible protein A U876_11870 PF00285 Citrate synthase, C-terminal domain U876_11875 PF03972 MmgE/PrpD family U876_11890 PF06974 Protein of unknown function (DUF1298) U876_11890 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain U876_11915 PF00106 short chain dehydrogenase U876_11925 PF07130 YebG protein U876_11935 PF05362 Lon protease (S16) C-terminal proteolytic domain U876_11935 PF13654 AAA domain U876_11940 PF07977 FabA-like domain U876_11945 PF04957 Ribosome modulation factor U876_11955 PF00005 ABC transporter U876_11955 PF12848 ABC transporter U876_11955 PF16326 ABC transporter C-terminal domain U876_11965 PF02926 THUMP domain U876_11965 PF10672 S-adenosylmethionine-dependent methyltransferase U876_11965 PF01170 Putative RNA methylase family UPF0020 U876_11970 PF07126 Cell-division protein ZapC U876_11975 PF01180 Dihydroorotate dehydrogenase U876_11980 PF05088 Bacterial NAD-glutamate dehydrogenase U876_11990 PF01433 Peptidase family M1 domain U876_11990 PF11940 Domain of unknown function (DUF3458) Ig-like fold U876_11990 PF17432 Domain of unknown function (DUF3458_C) ARM repeats U876_11995 PF00595 PDZ domain U876_11995 PF11818 C-terminal domain of tail specific protease (DUF3340) U876_11995 PF03572 Peptidase family S41 U876_11995 PF17804 Tail specific protease N-terminal domain U876_12000 PF04352 ProQ/FINO family U876_12000 PF17516 ProQ C-terminal domain U876_12005 PF13185 GAF domain U876_12015 PF00115 Cytochrome C and Quinol oxidase polypeptide I U876_12030 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP U876_12030 PF13442 Cytochrome C oxidase, cbb3-type, subunit III U876_12040 PF00403 Heavy-metal-associated domain U876_12055 PF00027 Cyclic nucleotide-binding domain U876_12055 PF13545 Crp-like helix-turn-helix domain U876_12060 PF00582 Universal stress protein family U876_12065 PF01171 PP-loop family U876_12080 PF14497 Glutathione S-transferase, C-terminal domain U876_12080 PF02798 Glutathione S-transferase, N-terminal domain U876_12085 PF05025 RbsD / FucU transport protein family U876_12090 PF00005 ABC transporter U876_12095 PF02653 Branched-chain amino acid transport system / permease component U876_12100 PF13407 Periplasmic binding protein domain U876_12105 PF00294 pfkB family carbohydrate kinase U876_12110 PF00356 Bacterial regulatory proteins, lacI family U876_12125 PF02146 Sir2 family U876_12140 PF09456 RcsC Alpha-Beta-Loop (ABL) U876_12140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_12140 PF00072 Response regulator receiver domain U876_12140 PF00512 His Kinase A (phospho-acceptor) domain U876_12145 PF00216 Bacterial DNA-binding protein U876_12150 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain U876_12150 PF03483 B3/4 domain U876_12150 PF03484 tRNA synthetase B5 domain U876_12150 PF03147 Ferredoxin-fold anticodon binding domain U876_12150 PF01588 Putative tRNA binding domain U876_12155 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain U876_12155 PF01409 tRNA synthetases class II core domain (F) U876_12160 PF00453 Ribosomal protein L20 U876_12165 PF01632 Ribosomal protein L35 U876_12170 PF05198 Translation initiation factor IF-3, N-terminal domain U876_12170 PF00707 Translation initiation factor IF-3, C-terminal domain U876_12175 PF02824 TGS domain U876_12175 PF03129 Anticodon binding domain U876_12175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain U876_12175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) U876_12185 PF04055 Radical SAM superfamily U876_12195 PF00521 DNA gyrase/topoisomerase IV, subunit A U876_12195 PF03989 DNA gyrase C-terminal domain, beta-propeller U876_12205 PF13419 Haloacid dehalogenase-like hydrolase U876_12210 PF03477 ATP cone domain U876_12210 PF00317 Ribonucleotide reductase, all-alpha domain U876_12210 PF02867 Ribonucleotide reductase, barrel domain U876_12215 PF00268 Ribonucleotide reductase, small chain U876_12220 PF00111 2Fe-2S iron-sulfur cluster binding domain U876_12225 PF06725 3D domain U876_12225 PF03562 MltA specific insert domain U876_12230 PF06945 Protein of unknown function (DUF1289) U876_12240 PF03613 PTS system mannose/fructose/sorbose family IID component U876_12245 PF03609 PTS system sorbose-specific iic component U876_12250 PF03610 PTS system fructose IIA component U876_12250 PF03830 PTS system sorbose subfamily IIB component U876_12265 PF00356 Bacterial regulatory proteins, lacI family U876_12265 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family U876_12270 PF06560 Glucose-6-phosphate isomerase (GPI) U876_12275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit U876_12275 PF02378 Phosphotransferase system, EIIC U876_12280 PF00294 pfkB family carbohydrate kinase U876_12285 PF00381 PTS HPr component phosphorylation site U876_12285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 U876_12290 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family U876_12290 PF00356 Bacterial regulatory proteins, lacI family U876_12295 PF03222 Tryptophan/tyrosine permease family U876_12310 PF00270 DEAD/DEAH box helicase U876_12310 PF00271 Helicase conserved C-terminal domain U876_12320 PF01264 Chorismate synthase U876_12325 PF05175 Methyltransferase small domain U876_12330 PF01713 Smr domain U876_12340 PF00990 Diguanylate cyclase, GGDEF domain U876_12340 PF08448 PAS fold U876_12345 PF00300 Histidine phosphatase superfamily (branch 1) U876_12360 PF00704 Glycosyl hydrolases family 18 U876_12360 PF08329 Chitinase A, N-terminal domain U876_12375 PF03831 PhnA domain U876_12375 PF08274 PhnA Zinc-Ribbon U876_12395 PF02567 Phenazine biosynthesis-like protein U876_12410 PF01327 Polypeptide deformylase U876_12425 PF05036 Sporulation related domain U876_12425 PF03330 Lytic transglycolase U876_12430 PF04310 MukB N-terminal U876_12430 PF16330 MukB hinge domain U876_12435 PF04288 MukE-like family U876_12440 PF03882 MukF winged-helix domain U876_12440 PF17192 MukF middle domain U876_12440 PF17193 MukF C-terminal domain U876_12450 PF02698 DUF218 domain U876_12455 PF00121 Triosephosphate isomerase U876_12460 PF00365 Phosphofructokinase U876_12465 PF07687 Peptidase dimerisation domain U876_12465 PF01546 Peptidase family M20/M25/M40 U876_12470 PF13419 Haloacid dehalogenase-like hydrolase U876_12475 PF02789 Cytosol aminopeptidase family, N-terminal domain U876_12475 PF00883 Cytosol aminopeptidase family, catalytic domain U876_12500 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) U876_12500 PF00128 Alpha amylase, catalytic domain U876_12510 PF11398 Protein of unknown function (DUF2813) U876_12515 PF12833 Helix-turn-helix domain U876_12515 PF14525 AraC-binding-like domain U876_12525 PF03466 LysR substrate binding domain U876_12525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_12530 PF01925 Sulfite exporter TauE/SafE U876_12545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily U876_12545 PF18029 Glyoxalase-like domain U876_12550 PF07478 D-ala D-ala ligase C-terminus U876_12550 PF01820 D-ala D-ala ligase N-terminus U876_12560 PF00255 Glutathione peroxidase U876_12565 PF00270 DEAD/DEAH box helicase U876_12565 PF00271 Helicase conserved C-terminal domain U876_12570 PF13673 Acetyltransferase (GNAT) domain U876_12580 PF02694 Uncharacterised BCR, YnfA/UPF0060 family U876_12590 PF01928 CYTH domain U876_12600 PF00583 Acetyltransferase (GNAT) family U876_12605 PF00465 Iron-containing alcohol dehydrogenase U876_12610 PF03992 Antibiotic biosynthesis monooxygenase U876_12615 PF08543 Phosphomethylpyrimidine kinase U876_12645 PF00561 alpha/beta hydrolase fold U876_12645 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus U876_12650 PF01575 MaoC like domain U876_12670 PF00664 ABC transporter transmembrane region U876_12670 PF00005 ABC transporter U876_12680 PF00005 ABC transporter U876_12680 PF00664 ABC transporter transmembrane region U876_12685 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) U876_12685 PF00672 HAMP domain U876_12685 PF00072 Response regulator receiver domain U876_12685 PF01627 Hpt domain U876_12685 PF00512 His Kinase A (phospho-acceptor) domain U876_12685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_12690 PF00085 Thioredoxin U876_12695 PF00939 Sodium:sulfate symporter transmembrane region U876_12700 PF00343 Carbohydrate phosphorylase U876_12725 PF04715 Anthranilate synthase component I, N terminal region U876_12725 PF00425 chorismate binding enzyme U876_12730 PF00293 NUDIX domain U876_12735 PF03222 Tryptophan/tyrosine permease family U876_12740 PF00375 Sodium:dicarboxylate symporter family U876_12745 PF16124 RecQ zinc-binding U876_12745 PF00570 HRDC domain U876_12745 PF00271 Helicase conserved C-terminal domain U876_12745 PF00270 DEAD/DEAH box helicase U876_12745 PF09382 RQC domain U876_12750 PF06798 PrkA serine protein kinase C-terminal domain U876_12750 PF08298 PrkA AAA domain U876_12755 PF04285 Protein of unknown function (DUF444) U876_12760 PF04293 SpoVR like protein U876_12765 PF07840 FadR C-terminal domain U876_12765 PF00392 Bacterial regulatory proteins, gntR family U876_12770 PF06450 Bacterial Na+/H+ antiporter B (NhaB) U876_12775 PF02600 Disulfide bond formation protein DsbB U876_12780 PF09335 SNARE associated Golgi protein U876_12790 PF12344 Ultra-violet resistance protein B U876_12790 PF17757 UvrB interaction domain U876_12790 PF00271 Helicase conserved C-terminal domain U876_12790 PF04851 Type III restriction enzyme, res subunit U876_12790 PF02151 UvrB/uvrC motif U876_12800 PF06826 Predicted Permease Membrane Region U876_12800 PF02080 TrkA-C domain U876_12805 PF01464 Transglycosylase SLT domain U876_12805 PF00497 Bacterial extracellular solute-binding proteins, family 3 U876_12820 PF01970 Tripartite tricarboxylate transporter TctA family U876_12825 PF08279 HTH domain U876_12825 PF12431 Transcriptional regulator U876_12825 PF00072 Response regulator receiver domain U876_12830 PF00989 PAS fold U876_12830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_12830 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain U876_12830 PF17203 Single cache domain 3 U876_12835 PF00480 ROK family U876_12835 PF01047 MarR family U876_12840 PF00672 HAMP domain U876_12840 PF17200 Single Cache domain 2 U876_12840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_12845 PF02810 SEC-C motif U876_12850 PF01266 FAD dependent oxidoreductase U876_12850 PF04324 BFD-like [2Fe-2S] binding domain U876_12855 PF00890 FAD binding domain U876_12860 PF02754 Cysteine-rich domain U876_12860 PF13183 4Fe-4S dicluster domain U876_12875 PF02335 Cytochrome c552 U876_12880 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) U876_12880 PF13435 Cytochrome c554 and c-prime U876_12885 PF00037 4Fe-4S binding domain U876_12885 PF13247 4Fe-4S dicluster domain U876_12890 PF03916 Polysulphide reductase, NrfD U876_12895 PF01578 Cytochrome C assembly protein U876_12895 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal U876_12900 PF08534 Redoxin U876_12910 PF00293 NUDIX domain U876_12915 PF00768 D-alanyl-D-alanine carboxypeptidase U876_12920 PF01212 Beta-eliminating lyase U876_12925 PF04244 Deoxyribodipyrimidine photo-lyase-related protein U876_12930 PF01266 FAD dependent oxidoreductase U876_12940 PF07969 Amidohydrolase family U876_12945 PF00478 IMP dehydrogenase / GMP reductase domain U876_12945 PF00571 CBS domain U876_12955 PF08267 Cobalamin-independent synthase, N-terminal domain U876_12955 PF01717 Cobalamin-independent synthase, Catalytic domain U876_12960 PF03466 LysR substrate binding domain U876_12960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_12970 PF07715 TonB-dependent Receptor Plug Domain U876_12970 PF00593 TonB dependent receptor U876_12975 PF12833 Helix-turn-helix domain U876_12980 PF00106 short chain dehydrogenase U876_12985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_12985 PF03466 LysR substrate binding domain U876_12990 PF13460 NAD(P)H-binding U876_13000 PF01053 Cys/Met metabolism PLP-dependent enzyme U876_13005 PF00675 Insulinase (Peptidase family M16) U876_13005 PF05193 Peptidase M16 inactive domain U876_13010 PF01118 Semialdehyde dehydrogenase, NAD binding domain U876_13010 PF02774 Semialdehyde dehydrogenase, dimerisation domain U876_13015 PF00893 Small Multidrug Resistance protein U876_13020 PF18381 YcaO cyclodehydratase C-terminal domain U876_13020 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding U876_13025 PF01226 Formate/nitrite transporter U876_13030 PF01228 Glycine radical U876_13030 PF02901 Pyruvate formate lyase-like U876_13040 PF00202 Aminotransferase class-III U876_13045 PF00266 Aminotransferase class-V U876_13050 PF07702 UTRA domain U876_13050 PF00392 Bacterial regulatory proteins, gntR family U876_13060 PF00005 ABC transporter U876_13065 PF00528 Binding-protein-dependent transport system inner membrane component U876_13070 PF01266 FAD dependent oxidoreductase U876_13075 PF03692 Putative zinc- or iron-chelating domain U876_13085 PF00549 CoA-ligase U876_13085 PF02629 CoA binding domain U876_13090 PF00549 CoA-ligase U876_13090 PF08442 ATP-grasp domain U876_13095 PF02817 e3 binding domain U876_13095 PF00364 Biotin-requiring enzyme U876_13095 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) U876_13100 PF16870 2-oxoglutarate dehydrogenase C-terminal U876_13100 PF02779 Transketolase, pyrimidine binding domain U876_13100 PF16078 2-oxoglutarate dehydrogenase N-terminus U876_13100 PF00676 Dehydrogenase E1 component U876_13105 PF13085 2Fe-2S iron-sulfur cluster binding domain U876_13110 PF00890 FAD binding domain U876_13110 PF02910 Fumarate reductase flavoprotein C-term U876_13115 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit U876_13120 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit U876_13125 PF00285 Citrate synthase, C-terminal domain U876_13140 PF00109 Beta-ketoacyl synthase, N-terminal domain U876_13140 PF02801 Beta-ketoacyl synthase, C-terminal domain U876_13145 PF05430 S-adenosyl-L-methionine-dependent methyltransferase U876_13145 PF01266 FAD dependent oxidoreductase U876_13155 PF03606 C4-dicarboxylate anaerobic carrier U876_13170 PF01863 Protein of unknown function DUF45 U876_13185 PF01197 Ribosomal protein L31 U876_13190 PF00444 Ribosomal protein L36 U876_13195 PF05726 Pirin C-terminal cupin domain U876_13195 PF02678 Pirin U876_13200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_13200 PF03466 LysR substrate binding domain U876_13205 PF02311 AraC-like ligand binding domain U876_13205 PF12833 Helix-turn-helix domain U876_13210 PF02653 Branched-chain amino acid transport system / permease component U876_13215 PF00005 ABC transporter U876_13220 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family U876_13225 PF02782 FGGY family of carbohydrate kinases, C-terminal domain U876_13230 PF00596 Class II Aldolase and Adducin N-terminal domain U876_13235 PF02610 L-arabinose isomerase U876_13235 PF11762 L-arabinose isomerase C-terminal domain U876_13240 PF08411 Exonuclease C-terminal U876_13240 PF00929 Exonuclease U876_13255 PF03788 LrgA family U876_13260 PF04172 LrgB-like family U876_13265 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region U876_13265 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region U876_13270 PF00501 AMP-binding enzyme U876_13275 PF08891 YfcL protein U876_13285 PF03741 Integral membrane protein TerC family U876_13290 PF00691 OmpA family U876_13295 PF17152 Periplasmic sensor domain U876_13295 PF00990 Diguanylate cyclase, GGDEF domain U876_13300 PF13689 YfiR/HmsC-like U876_13305 PF00158 Sigma-54 interaction domain U876_13305 PF18024 Helix-turn-helix domain U876_13310 PF01329 Pterin 4 alpha carbinolamine dehydratase U876_13315 PF01329 Pterin 4 alpha carbinolamine dehydratase U876_13320 PF00351 Biopterin-dependent aromatic amino acid hydroxylase U876_13325 PF05128 Domain of unknown function (DUF697) U876_13330 PF04317 YcjX-like family, DUF463 U876_13340 PF06667 Phage shock protein B U876_13345 PF04012 PspA/IM30 family U876_13350 PF00158 Sigma-54 interaction domain U876_13350 PF02954 Bacterial regulatory protein, Fis family U876_13355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle U876_13360 PF00528 Binding-protein-dependent transport system inner membrane component U876_13365 PF00528 Binding-protein-dependent transport system inner membrane component U876_13365 PF12911 N-terminal TM domain of oligopeptide transport permease C U876_13375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region U876_13375 PF00005 ABC transporter U876_13380 PF00005 ABC transporter U876_13385 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) U876_13390 PF00156 Phosphoribosyl transferase domain U876_13395 PF02674 Colicin V production protein U876_13400 PF02403 Seryl-tRNA synthetase N-terminal domain U876_13400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) U876_13405 PF00004 ATPase family associated with various cellular activities (AAA) U876_13405 PF16193 AAA C-terminal domain U876_13405 PF12002 MgsA AAA+ ATPase C terminal U876_13410 PF03548 Outer membrane lipoprotein carrier protein LolA U876_13415 PF13491 4TM region of DNA translocase FtsK/SpoIIIE U876_13415 PF09397 Ftsk gamma domain U876_13415 PF17854 FtsK alpha domain U876_13415 PF01580 FtsK/SpoIIIE family U876_13420 PF01037 Lrp/AsnC ligand binding domain U876_13425 PF07992 Pyridine nucleotide-disulphide oxidoreductase U876_13430 PF17158 Membrane-associated sensor, integral membrane domain U876_13430 PF00990 Diguanylate cyclase, GGDEF domain U876_13435 PF05433 Glycine zipper 2TM domain U876_13440 PF03588 Leucyl/phenylalanyl-tRNA protein transferase U876_13445 PF04377 Arginine-tRNA-protein transferase, C terminus U876_13445 PF04376 Arginine-tRNA-protein transferase, N terminus U876_13450 PF01176 Translation initiation factor 1A / IF-1 U876_13455 PF10431 C-terminal, D2-small domain, of ClpB protein U876_13455 PF07724 AAA domain (Cdc48 subfamily) U876_13455 PF17871 AAA lid domain U876_13455 PF02861 Clp amino terminal domain, pathogenicity island component U876_13455 PF00004 ATPase family associated with various cellular activities (AAA) U876_13460 PF02617 ATP-dependent Clp protease adaptor protein ClpS U876_13465 PF00313 'Cold-shock' DNA-binding domain U876_13470 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain U876_13470 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain U876_13495 PF00182 Chitinase class I U876_13500 PF04717 Type VI secretion system, phage-baseplate injector U876_13530 PF00158 Sigma-54 interaction domain U876_13530 PF06505 Activator of aromatic catabolism U876_13530 PF02830 V4R domain U876_13530 PF02954 Bacterial regulatory protein, Fis family U876_13535 PF00004 ATPase family associated with various cellular activities (AAA) U876_13535 PF17871 AAA lid domain U876_13535 PF07724 AAA domain (Cdc48 subfamily) U876_13535 PF10431 C-terminal, D2-small domain, of ClpB protein U876_13605 PF04717 Type VI secretion system, phage-baseplate injector U876_13610 PF05638 Type VI secretion system effector, Hcp U876_13625 PF10722 Putative bacterial sensory transduction regulator U876_13635 PF00265 Thymidine kinase U876_13640 PF03553 Na+/H+ antiporter family U876_13645 PF00816 H-NS histone family U876_13650 PF01923 Cobalamin adenosyltransferase U876_13655 PF12843 Putative quorum-sensing-regulated virulence factor U876_13660 PF04055 Radical SAM superfamily U876_13665 PF06508 Queuosine biosynthesis protein QueC U876_13680 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family U876_13685 PF18073 Rubredoxin metal binding domain U876_13695 PF00216 Bacterial DNA-binding protein U876_13700 PF00575 S1 RNA binding domain U876_13705 PF02224 Cytidylate kinase U876_13710 PF00925 GTP cyclohydrolase II U876_13715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_13715 PF03466 LysR substrate binding domain U876_13720 PF03466 LysR substrate binding domain U876_13720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_13725 PF07690 Major Facilitator Superfamily U876_13740 PF00881 Nitroreductase family U876_13745 PF03707 Bacterial signalling protein N terminal repeat U876_13745 PF00990 Diguanylate cyclase, GGDEF domain U876_13745 PF13188 PAS domain U876_13745 PF00563 EAL domain U876_13755 PF03466 LysR substrate binding domain U876_13755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_13760 PF00072 Response regulator receiver domain U876_13770 PF01212 Beta-eliminating lyase U876_13785 PF00248 Aldo/keto reductase family U876_13790 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) U876_13800 PF03411 Penicillin-insensitive murein endopeptidase U876_13810 PF04536 TPM domain U876_13825 PF01618 MotA/TolQ/ExbB proton channel family U876_13830 PF00691 OmpA family U876_13830 PF13677 Membrane MotB of proton-channel complex MotA/MotB U876_13835 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 U876_13840 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit U876_13845 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit U876_13845 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit U876_13855 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region U876_13855 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit U876_13860 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region U876_13860 PF00384 Molybdopterin oxidoreductase U876_13860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain U876_13865 PF00146 NADH dehydrogenase U876_13870 PF12838 4Fe-4S dicluster domain U876_13875 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 U876_13880 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L U876_13885 PF00361 Proton-conducting membrane transporter U876_13885 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus U876_13890 PF00361 Proton-conducting membrane transporter U876_13895 PF00361 Proton-conducting membrane transporter U876_13905 PF02769 AIR synthase related protein, C-terminal domain U876_13905 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain U876_13905 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal U876_13910 PF00497 Bacterial extracellular solute-binding proteins, family 3 U876_13910 PF01464 Transglycosylase SLT domain U876_13915 PF07191 zinc-ribbons U876_13920 PF01926 50S ribosome-binding GTPase U876_13920 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal U876_13925 PF13360 PQQ-like domain U876_13930 PF09976 Tetratricopeptide repeat-like domain U876_13935 PF13393 Histidyl-tRNA synthetase U876_13935 PF03129 Anticodon binding domain U876_13940 PF04551 GcpE protein U876_13945 PF13464 Domain of unknown function (DUF4115) U876_13955 PF04055 Radical SAM superfamily U876_13960 PF00334 Nucleoside diphosphate kinase U876_13965 PF12404 Peptidase U876_13965 PF00883 Cytosol aminopeptidase family, catalytic domain U876_13970 PF12404 Peptidase U876_13970 PF00883 Cytosol aminopeptidase family, catalytic domain U876_13975 PF00111 2Fe-2S iron-sulfur cluster binding domain U876_13980 PF00012 Hsp70 protein U876_13985 PF07743 HSCB C-terminal oligomerisation domain U876_13990 PF01521 Iron-sulphur cluster biosynthesis U876_13995 PF01592 NifU-like N terminal domain U876_14000 PF00266 Aminotransferase class-V U876_14005 PF02082 Transcriptional regulator U876_14010 PF00588 SpoU rRNA Methylase family U876_14035 PF07719 Tetratricopeptide repeat U876_14035 PF13181 Tetratricopeptide repeat U876_14045 PF02355 Protein export membrane protein U876_14045 PF07549 SecD/SecF GG Motif U876_14050 PF02355 Protein export membrane protein U876_14050 PF13721 SecD export protein N-terminal TM region U876_14050 PF07549 SecD/SecF GG Motif U876_14055 PF02699 Preprotein translocase subunit U876_14060 PF01702 Queuine tRNA-ribosyltransferase U876_14065 PF02547 Queuosine biosynthesis protein U876_14070 PF00571 CBS domain U876_14075 PF00578 AhpC/TSA family U876_14075 PF10417 C-terminal domain of 1-Cys peroxiredoxin U876_14080 PF13192 Thioredoxin domain U876_14080 PF07992 Pyridine nucleotide-disulphide oxidoreductase U876_14085 PF07690 Major Facilitator Superfamily U876_14095 PF08241 Methyltransferase domain U876_14100 PF03960 ArsC family U876_14105 PF01758 Sodium Bile acid symporter family U876_14110 PF01022 Bacterial regulatory protein, arsR family U876_14115 PF02347 Glycine cleavage system P-protein U876_14120 PF01597 Glycine cleavage H-protein U876_14125 PF08669 Glycine cleavage T-protein C-terminal barrel domain U876_14125 PF01571 Aminomethyltransferase folate-binding domain U876_14130 PF01494 FAD binding domain U876_14135 PF01494 FAD binding domain U876_14140 PF03695 Uncharacterised protein family (UPF0149) U876_14145 PF05164 Cell division protein ZapA U876_14150 PF07690 Major Facilitator Superfamily U876_14155 PF00043 Glutathione S-transferase, C-terminal domain U876_14155 PF02798 Glutathione S-transferase, N-terminal domain U876_14165 PF00459 Inositol monophosphatase family U876_14170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_14170 PF00672 HAMP domain U876_14170 PF12729 Four helix bundle sensory module for signal transduction U876_14175 PF02535 ZIP Zinc transporter U876_14185 PF01048 Phosphorylase superfamily U876_14195 PF01497 Periplasmic binding protein U876_14200 PF02719 Polysaccharide biosynthesis protein U876_14205 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family U876_14220 PF00202 Aminotransferase class-III U876_14230 PF03102 NeuB family U876_14230 PF08666 SAF domain U876_14255 PF02561 Flagellar protein FliS U876_14260 PF02465 Flagellar hook-associated protein 2 N-terminus U876_14260 PF07195 Flagellar hook-associated protein 2 C-terminus U876_14260 PF07196 Flagellin hook IN motif U876_14270 PF07196 Flagellin hook IN motif U876_14270 PF00700 Bacterial flagellin C-terminal helical region U876_14270 PF00669 Bacterial flagellin N-terminal helical region U876_14275 PF01527 Transposase U876_14285 PF00669 Bacterial flagellin N-terminal helical region U876_14285 PF07196 Flagellin hook IN motif U876_14285 PF00700 Bacterial flagellin C-terminal helical region U876_14290 PF00669 Bacterial flagellin N-terminal helical region U876_14290 PF07196 Flagellin hook IN motif U876_14290 PF00700 Bacterial flagellin C-terminal helical region U876_14295 PF03458 UPF0126 domain U876_14305 PF02568 Thiamine biosynthesis protein (ThiI) U876_14305 PF02926 THUMP domain U876_14315 PF06832 Penicillin-Binding Protein C-terminus Family U876_14315 PF00905 Penicillin binding protein transpeptidase domain U876_14315 PF00912 Transglycosylase U876_14320 PF00207 Alpha-2-macroglobulin family U876_14320 PF07703 Alpha-2-macroglobulin bait region domain U876_14320 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain U876_14320 PF11974 Bacterial alpha-2-macroglobulin MG3 domain U876_14320 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain U876_14320 PF17962 Bacterial macroglobulin domain 6 U876_14320 PF01835 MG2 domain U876_14320 PF07678 A-macroglobulin TED domain U876_14320 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain U876_14325 PF07687 Peptidase dimerisation domain U876_14325 PF01546 Peptidase family M20/M25/M40 U876_14330 PF01594 AI-2E family transporter U876_14335 PF02321 Outer membrane efflux protein U876_14340 PF00529 HlyD membrane-fusion protein of T1SS U876_14340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion U876_14355 PF07992 Pyridine nucleotide-disulphide oxidoreductase U876_14355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain U876_14360 PF00563 EAL domain U876_14360 PF00990 Diguanylate cyclase, GGDEF domain U876_14360 PF03707 Bacterial signalling protein N terminal repeat U876_14365 PF04055 Radical SAM superfamily U876_14375 PF00528 Binding-protein-dependent transport system inner membrane component U876_14380 PF00528 Binding-protein-dependent transport system inner membrane component U876_14385 PF00497 Bacterial extracellular solute-binding proteins, family 3 U876_14390 PF00005 ABC transporter U876_14395 PF03956 Lysine exporter LysO U876_14400 PF01979 Amidohydrolase family U876_14405 PF04336 Acyl carrier protein phosphodiesterase U876_14425 PF03960 ArsC family U876_14430 PF00578 AhpC/TSA family U876_14435 PF01435 Peptidase family M48 U876_14435 PF13181 Tetratricopeptide repeat U876_14445 PF01594 AI-2E family transporter U876_14455 PF00561 alpha/beta hydrolase fold U876_14460 PF03976 Polyphosphate kinase 2 (PPK2) U876_14465 PF00005 ABC transporter U876_14465 PF08402 TOBE domain U876_14470 PF00528 Binding-protein-dependent transport system inner membrane component U876_14475 PF00528 Binding-protein-dependent transport system inner membrane component U876_14475 PF14785 Maltose transport system permease protein MalF P2 domain U876_14480 PF01547 Bacterial extracellular solute-binding protein U876_14485 PF04245 37-kD nucleoid-associated bacterial protein U876_14490 PF07208 Protein of unknown function (DUF1414) U876_14495 PF00884 Sulfatase U876_14495 PF11893 Domain of unknown function (DUF3413) U876_14500 PF07715 TonB-dependent Receptor Plug Domain U876_14500 PF00593 TonB dependent receptor U876_14505 PF00326 Prolyl oligopeptidase family U876_14505 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain U876_14525 PF03974 Ecotin U876_14530 PF04219 Protein of unknown function, DUF U876_14535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_14535 PF03466 LysR substrate binding domain U876_14540 PF02153 Prephenate dehydrogenase U876_14540 PF01817 Chorismate mutase type II U876_14545 PF00793 DAHP synthetase I family U876_14550 PF03009 Glycerophosphoryl diester phosphodiesterase family U876_14555 PF16901 C-terminal domain of alpha-glycerophosphate oxidase U876_14555 PF01266 FAD dependent oxidoreductase U876_14560 PF08220 DeoR-like helix-turn-helix domain U876_14560 PF00455 DeoR C terminal sensor domain U876_14565 PF07690 Major Facilitator Superfamily U876_14570 PF00230 Major intrinsic protein U876_14575 PF00370 FGGY family of carbohydrate kinases, N-terminal domain U876_14575 PF02782 FGGY family of carbohydrate kinases, C-terminal domain U876_14580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_14580 PF03466 LysR substrate binding domain U876_14600 PF00248 Aldo/keto reductase family U876_14605 PF07690 Major Facilitator Superfamily U876_14615 PF02322 Cytochrome bd terminal oxidase subunit II U876_14620 PF01654 Cytochrome bd terminal oxidase subunit I U876_14625 PF00155 Aminotransferase class I and II U876_14625 PF00392 Bacterial regulatory proteins, gntR family U876_14635 PF04391 Protein of unknown function (DUF533) U876_14660 PF07690 Major Facilitator Superfamily U876_14665 PF03466 LysR substrate binding domain U876_14665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_14675 PF07690 Major Facilitator Superfamily U876_14680 PF01479 S4 domain U876_14680 PF00849 RNA pseudouridylate synthase U876_14690 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase U876_14690 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain U876_14710 PF04851 Type III restriction enzyme, res subunit U876_14710 PF00271 Helicase conserved C-terminal domain U876_14715 PF00300 Histidine phosphatase superfamily (branch 1) U876_14720 PF08348 YheO-like PAS domain U876_14720 PF13309 HTH domain U876_14725 PF03313 Serine dehydratase alpha chain U876_14730 PF01042 Endoribonuclease L-PSP U876_14740 PF00672 HAMP domain U876_14740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_14755 PF17810 Arginine decarboxylase helical bundle domain U876_14755 PF17944 Arginine decarboxylase C-terminal helical extension U876_14755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain U876_14760 PF07687 Peptidase dimerisation domain U876_14760 PF01546 Peptidase family M20/M25/M40 U876_14785 PF04264 YceI-like domain U876_14790 PF03466 LysR substrate binding domain U876_14790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_14800 PF01268 Formate--tetrahydrofolate ligase U876_14805 PF00672 HAMP domain U876_14805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_14805 PF17200 Single Cache domain 2 U876_14810 PF01227 GTP cyclohydrolase I U876_14815 PF03453 MoeA N-terminal region (domain I and II) U876_14815 PF03454 MoeA C-terminal region (domain IV) U876_14815 PF00994 Probable molybdopterin binding domain U876_14820 PF00899 ThiF family U876_14825 PF00561 alpha/beta hydrolase fold U876_14830 PF00005 ABC transporter U876_14830 PF03459 TOBE domain U876_14835 PF00528 Binding-protein-dependent transport system inner membrane component U876_14845 PF02391 MoaE protein U876_14850 PF02597 ThiS family U876_14855 PF01967 MoaC family U876_14860 PF00994 Probable molybdopterin binding domain U876_14865 PF03264 NapC/NirT cytochrome c family, N-terminal region U876_14870 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) U876_14875 PF12801 4Fe-4S binding domain U876_14875 PF13237 4Fe-4S dicluster domain U876_14880 PF12838 4Fe-4S dicluster domain U876_14880 PF12800 4Fe-4S binding domain U876_14885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain U876_14885 PF01568 Molydopterin dinucleotide binding domain U876_14885 PF00384 Molybdopterin oxidoreductase U876_14885 PF10518 TAT (twin-arginine translocation) pathway signal sequence U876_14900 PF13187 4Fe-4S dicluster domain U876_14900 PF12800 4Fe-4S binding domain U876_14900 PF00037 4Fe-4S binding domain U876_14905 PF04055 Radical SAM superfamily U876_14905 PF06463 Molybdenum Cofactor Synthesis C U876_14910 PF00672 HAMP domain U876_14910 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term U876_14910 PF07730 Histidine kinase U876_14910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_14915 PF00196 Bacterial regulatory proteins, luxR family U876_14915 PF00072 Response regulator receiver domain U876_14925 PF17149 Periplasmic sensor domain found in signal transduction proteins U876_14925 PF00512 His Kinase A (phospho-acceptor) domain U876_14925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_14925 PF01627 Hpt domain U876_14925 PF00072 Response regulator receiver domain U876_14925 PF00672 HAMP domain U876_14935 PF01933 Uncharacterised protein family UPF0052 U876_14945 PF13230 Glutamine amidotransferases class-II U876_14950 PF13580 SIS domain U876_14960 PF09317 Domain of unknown function (DUF1974) U876_14960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain U876_14960 PF02770 Acyl-CoA dehydrogenase, middle domain U876_14960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain U876_14970 PF11849 Domain of unknown function (DUF3369) U876_14980 PF00929 Exonuclease U876_14985 PF00075 RNase H U876_14990 PF08241 Methyltransferase domain U876_14995 PF00753 Metallo-beta-lactamase superfamily U876_14995 PF16123 Hydroxyacylglutathione hydrolase C-terminus U876_15000 PF01464 Transglycosylase SLT domain U876_15000 PF01476 LysM domain U876_15005 PF03372 Endonuclease/Exonuclease/phosphatase family U876_15015 PF03061 Thioesterase superfamily U876_15025 PF00356 Bacterial regulatory proteins, lacI family U876_15030 PF01464 Transglycosylase SLT domain U876_15030 PF14718 Soluble lytic murein transglycosylase L domain U876_15035 PF00990 Diguanylate cyclase, GGDEF domain U876_15035 PF00563 EAL domain U876_15035 PF03707 Bacterial signalling protein N terminal repeat U876_15040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein U876_15060 PF04357 TamB, inner membrane protein subunit of TAM complex U876_15065 PF01103 Surface antigen U876_15065 PF07244 Surface antigen variable number repeat U876_15065 PF17243 POTRA domain TamA domain 1 U876_15080 PF01625 Peptide methionine sulfoxide reductase U876_15090 PF02627 Carboxymuconolactone decarboxylase family U876_15095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain U876_15095 PF00403 Heavy-metal-associated domain U876_15095 PF07992 Pyridine nucleotide-disulphide oxidoreductase U876_15100 PF13416 Bacterial extracellular solute-binding protein U876_15110 PF00005 ABC transporter U876_15115 PF01066 CDP-alcohol phosphatidyltransferase U876_15120 PF13406 Transglycosylase SLT domain U876_15125 PF01047 MarR family U876_15135 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain U876_15135 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II U876_15135 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III U876_15135 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I U876_15140 PF03925 SeqA protein C-terminal domain U876_15140 PF17206 SeqA protein N-terminal domain U876_15145 PF12697 Alpha/beta hydrolase family U876_15155 PF01402 Ribbon-helix-helix protein, copG family U876_15160 PF00258 Flavodoxin U876_15170 PF01475 Ferric uptake regulator family U876_15175 PF00749 tRNA synthetases class I (E and Q), catalytic domain U876_15175 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain U876_15180 PF03173 Putative carbohydrate binding domain U876_15180 PF00728 Glycosyl hydrolase family 20, catalytic domain U876_15180 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain U876_15180 PF02838 Glycosyl hydrolase family 20, domain 2 U876_15185 PF02378 Phosphotransferase system, EIIC U876_15185 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 U876_15185 PF00367 phosphotransferase system, EIIB U876_15190 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase U876_15195 PF01979 Amidohydrolase family U876_15200 PF01047 MarR family U876_15200 PF00480 ROK family U876_15210 PF00884 Sulfatase U876_15210 PF08019 Phosphoethanolamine transferase EptA/EptB U876_15215 PF01709 Transcriptional regulator U876_15220 PF01336 OB-fold nucleic acid binding domain U876_15220 PF00152 tRNA synthetases class II (D, K and N) U876_15220 PF02938 GAD domain U876_15225 PF01904 Protein of unknown function DUF72 U876_15230 PF13649 Methyltransferase domain U876_15235 PF08003 Protein of unknown function (DUF1698) U876_15255 PF10417 C-terminal domain of 1-Cys peroxiredoxin U876_15255 PF00578 AhpC/TSA family U876_15260 PF03466 LysR substrate binding domain U876_15260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_15265 PF07968 Leukocidin/Hemolysin toxin family U876_15265 PF12563 Hemolytic toxin N terminal U876_15270 PF00877 NlpC/P60 family U876_15280 PF00171 Aldehyde dehydrogenase family U876_15285 PF00440 Bacterial regulatory proteins, tetR family U876_15285 PF08359 YsiA-like protein, C-terminal region U876_15295 PF00465 Iron-containing alcohol dehydrogenase U876_15305 PF00291 Pyridoxal-phosphate dependent enzyme U876_15325 PF01554 MatE U876_15345 PF01804 Penicillin amidase U876_15350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain U876_15350 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg U876_15350 PF10371 Domain of unknown function U876_15350 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase U876_15350 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II U876_15355 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region U876_15355 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster U876_15355 PF07992 Pyridine nucleotide-disulphide oxidoreductase U876_15360 PF00111 2Fe-2S iron-sulfur cluster binding domain U876_15360 PF03473 MOSC domain U876_15360 PF03476 MOSC N-terminal beta barrel domain U876_15360 PF03473 MOSC domain U876_15360 PF00111 2Fe-2S iron-sulfur cluster binding domain U876_15360 PF03476 MOSC N-terminal beta barrel domain U876_15365 PF13426 PAS domain U876_15365 PF08447 PAS fold U876_15365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_15370 PF01435 Peptidase family M48 U876_15380 PF08241 Methyltransferase domain U876_15380 PF12697 Alpha/beta hydrolase family U876_15385 PF00155 Aminotransferase class I and II U876_15390 PF04055 Radical SAM superfamily U876_15390 PF06968 Biotin and Thiamin Synthesis associated domain U876_15410 PF01336 OB-fold nucleic acid binding domain U876_15410 PF00152 tRNA synthetases class II (D, K and N) U876_15415 PF03605 Anaerobic c4-dicarboxylate membrane transporter U876_15425 PF01546 Peptidase family M20/M25/M40 U876_15425 PF07687 Peptidase dimerisation domain U876_15430 PF03606 C4-dicarboxylate anaerobic carrier U876_15440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_15440 PF03466 LysR substrate binding domain U876_15445 PF03960 ArsC family U876_15450 PF01546 Peptidase family M20/M25/M40 U876_15450 PF07687 Peptidase dimerisation domain U876_15455 PF02557 D-alanyl-D-alanine carboxypeptidase U876_15465 PF02080 TrkA-C domain U876_15465 PF03471 Transporter associated domain U876_15465 PF00999 Sodium/hydrogen exchanger family U876_15475 PF02080 TrkA-C domain U876_15475 PF00999 Sodium/hydrogen exchanger family U876_15475 PF03471 Transporter associated domain U876_15485 PF01810 LysE type translocator U876_15490 PF00672 HAMP domain U876_15490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_15495 PF07509 Protein of unknown function (DUF1523) U876_15510 PF01156 Inosine-uridine preferring nucleoside hydrolase U876_15515 PF00849 RNA pseudouridylate synthase U876_15520 PF01048 Phosphorylase superfamily U876_15525 PF00465 Iron-containing alcohol dehydrogenase U876_15560 PF00437 Type II/IV secretion system protein U876_15575 PF00263 Bacterial type II and III secretion system protein U876_15575 PF04972 BON domain U876_15575 PF13629 Pilus formation protein N terminal region U876_15605 PF04355 SmpA / OmlA family U876_15610 PF13460 NAD(P)H-binding U876_15620 PF03364 Polyketide cyclase / dehydrase and lipid transport U876_15625 PF01668 SmpB protein U876_15700 PF10124 Mu-like prophage major head subunit gpT U876_15705 PF10123 Mu-like prophage I protein U876_15725 PF06074 Protein of unknown function (DUF935) U876_15730 PF03237 Terminase-like family U876_15735 PF11985 Protein of unknown function (DUF3486) U876_15740 PF08461 Ribonuclease R winged-helix domain U876_15780 PF08765 Mor transcription activator family U876_15850 PF08463 EcoEI R protein C-terminal U876_15850 PF00271 Helicase conserved C-terminal domain U876_15850 PF04851 Type III restriction enzyme, res subunit U876_15850 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) U876_15855 PF12161 HsdM N-terminal domain U876_15855 PF02384 N-6 DNA Methylase U876_15860 PF01420 Type I restriction modification DNA specificity domain U876_15885 PF03466 LysR substrate binding domain U876_15885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_15890 PF02447 GntP family permease U876_15895 PF00291 Pyridoxal-phosphate dependent enzyme U876_15905 PF00180 Isocitrate/isopropylmalate dehydrogenase U876_15910 PF12833 Helix-turn-helix domain U876_15915 PF01238 Phosphomannose isomerase type I U876_15940 PF00155 Aminotransferase class I and II U876_15945 PF00367 phosphotransferase system, EIIB U876_15945 PF02378 Phosphotransferase system, EIIC U876_15950 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family U876_15950 PF00356 Bacterial regulatory proteins, lacI family U876_15965 PF00583 Acetyltransferase (GNAT) family U876_15985 PF02378 Phosphotransferase system, EIIC U876_15985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 U876_15985 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit U876_15990 PF07690 Major Facilitator Superfamily U876_15995 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit U876_16005 PF00849 RNA pseudouridylate synthase U876_16010 PF00293 NUDIX domain U876_16020 PF04356 Protein of unknown function (DUF489) U876_16025 PF00206 Lyase U876_16025 PF08328 Adenylosuccinate lyase C-terminal U876_16030 PF08007 Cupin superfamily protein U876_16040 PF13508 Acetyltransferase (GNAT) domain U876_16050 PF02798 Glutathione S-transferase, N-terminal domain U876_16055 PF01243 Pyridoxamine 5'-phosphate oxidase U876_16055 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region U876_16070 PF01189 16S rRNA methyltransferase RsmB/F U876_16070 PF01029 NusB family U876_16075 PF00462 Glutaredoxin U876_16080 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain U876_16080 PF02777 Iron/manganese superoxide dismutases, C-terminal domain U876_16085 PF04333 MlaA lipoprotein U876_16090 PF03918 Cytochrome C biogenesis protein U876_16095 PF03918 Cytochrome C biogenesis protein U876_16100 PF08534 Redoxin U876_16105 PF01578 Cytochrome C assembly protein U876_16105 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal U876_16110 PF03100 CcmE U876_16115 PF04995 Heme exporter protein D (CcmD) U876_16120 PF01578 Cytochrome C assembly protein U876_16125 PF03379 CcmB protein U876_16130 PF00005 ABC transporter U876_16140 PF01584 CheW-like domain U876_16150 PF13614 AAA domain U876_16155 PF13677 Membrane MotB of proton-channel complex MotA/MotB U876_16155 PF00691 OmpA family U876_16160 PF01618 MotA/TolQ/ExbB proton channel family U876_16165 PF00072 Response regulator receiver domain U876_16165 PF01339 CheB methylesterase U876_16170 PF01627 Hpt domain U876_16170 PF07194 P2 response regulator binding domain U876_16170 PF01584 CheW-like domain U876_16170 PF02895 Signal transducing histidine kinase, homodimeric domain U876_16170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_16175 PF04344 Chemotaxis phosphatase, CheZ U876_16180 PF00072 Response regulator receiver domain U876_16185 PF04542 Sigma-70 region 2 U876_16185 PF04545 Sigma-70, region 4 U876_16185 PF04539 Sigma-70 region 3 U876_16190 PF10609 NUBPL iron-transfer P-loop NTPase U876_16195 PF00448 SRP54-type protein, GTPase domain U876_16200 PF00771 FHIPEP family U876_16205 PF01312 FlhB HrpN YscU SpaS Family U876_16210 PF01311 Bacterial export proteins, family 1 U876_16215 PF01313 Bacterial export proteins, family 3 U876_16220 PF00813 FliP family U876_16225 PF04347 Flagellar biosynthesis protein, FliO U876_16230 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term U876_16235 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term U876_16235 PF02154 Flagellar motor switch protein FliM U876_16255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain U876_16255 PF18269 T3SS EscN ATPase C-terminal domain U876_16265 PF14842 FliG N-terminal domain U876_16265 PF14841 FliG middle domain U876_16265 PF01706 FliG C-terminal domain U876_16270 PF01514 Secretory protein of YscJ/FliF family U876_16270 PF08345 Flagellar M-ring protein C-terminal U876_16275 PF02049 Flagellar hook-basal body complex protein FliE U876_16285 PF00072 Response regulator receiver domain U876_16290 PF18693 TRAM domain U876_16290 PF00919 Uncharacterized protein family UPF0004 U876_16290 PF04055 Radical SAM superfamily U876_16300 PF07634 RtxA repeat U876_16300 PF11713 Peptidase C80 family U876_16300 PF11647 Membrane Localization Domain U876_16300 PF16671 Actin cross-linking domain U876_16300 PF12146 Serine aminopeptidase, S33 U876_16315 PF00664 ABC transporter transmembrane region U876_16315 PF00005 ABC transporter U876_16315 PF03412 Peptidase C39 family U876_16325 PF03412 Peptidase C39 family U876_16325 PF00005 ABC transporter U876_16325 PF00664 ABC transporter transmembrane region U876_16330 PF00486 Transcriptional regulatory protein, C terminal U876_16330 PF00072 Response regulator receiver domain U876_16340 PF02685 Glucokinase U876_16345 PF01418 Helix-turn-helix domain, rpiR family U876_16345 PF01380 SIS domain U876_16350 PF02887 Pyruvate kinase, alpha/beta domain U876_16350 PF00224 Pyruvate kinase, barrel domain U876_16360 PF00873 AcrB/AcrD/AcrF family U876_16365 PF09317 Domain of unknown function (DUF1974) U876_16365 PF02770 Acyl-CoA dehydrogenase, middle domain U876_16365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain U876_16365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain U876_16370 PF00440 Bacterial regulatory proteins, tetR family U876_16385 PF00384 Molybdopterin oxidoreductase U876_16390 PF02634 FdhD/NarQ family U876_16395 PF03466 LysR substrate binding domain U876_16395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_16415 PF00936 BMC domain U876_16420 PF00936 BMC domain U876_16425 PF00936 BMC domain U876_16430 PF00465 Iron-containing alcohol dehydrogenase U876_16430 PF00171 Aldehyde dehydrogenase family U876_16440 PF00465 Iron-containing alcohol dehydrogenase U876_16440 PF00171 Aldehyde dehydrogenase family U876_16445 PF02901 Pyruvate formate lyase-like U876_16445 PF01228 Glycine radical U876_16450 PF13187 4Fe-4S dicluster domain U876_16450 PF04055 Radical SAM superfamily U876_16455 PF00936 BMC domain U876_16460 PF06130 Phosphate propanoyltransferase U876_16470 PF00893 Small Multidrug Resistance protein U876_16475 PF00893 Small Multidrug Resistance protein U876_16505 PF04074 YhcH/YjgK/YiaL U876_16510 PF13936 Helix-turn-helix domain U876_16510 PF00665 Integrase core domain U876_16515 PF00474 Sodium:solute symporter family U876_16520 PF00480 ROK family U876_16525 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase U876_16530 PF01418 Helix-turn-helix domain, rpiR family U876_16530 PF01380 SIS domain U876_16535 PF00701 Dihydrodipicolinate synthetase family U876_16540 PF00141 Peroxidase U876_16545 PF08220 DeoR-like helix-turn-helix domain U876_16545 PF00455 DeoR C terminal sensor domain U876_16550 PF07690 Major Facilitator Superfamily U876_16555 PF07882 L-fucose isomerase, second N-terminal domain U876_16555 PF02952 L-fucose isomerase, C-terminal domain U876_16555 PF07881 L-fucose isomerase, first N-terminal domain U876_16560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain U876_16560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain U876_16570 PF05025 RbsD / FucU transport protein family U876_16575 PF00465 Iron-containing alcohol dehydrogenase U876_16580 PF00005 ABC transporter U876_16580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region U876_16585 PF00528 Binding-protein-dependent transport system inner membrane component U876_16585 PF12911 N-terminal TM domain of oligopeptide transport permease C U876_16590 PF00528 Binding-protein-dependent transport system inner membrane component U876_16595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle U876_16605 PF03734 L,D-transpeptidase catalytic domain U876_16605 PF17969 L,D-transpeptidase C-terminal domain U876_16605 PF01476 LysM domain U876_16620 PF05971 RNA methyltransferase U876_16625 PF00877 NlpC/P60 family U876_16630 PF01648 4'-phosphopantetheinyl transferase superfamily U876_16635 PF00085 Thioredoxin U876_16645 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase U876_16650 PF01842 ACT domain U876_16650 PF00551 Formyl transferase U876_16660 PF13396 Phospholipase_D-nuclease N-terminal U876_16660 PF13091 PLD-like domain U876_16675 PF01551 Peptidase family M23 U876_16680 PF00128 Alpha amylase, catalytic domain U876_16685 PF01551 Peptidase family M23 U876_16685 PF01464 Transglycosylase SLT domain U876_16685 PF10145 Phage-related minor tail protein U876_16690 PF00230 Major intrinsic protein U876_16695 PF02075 Crossover junction endodeoxyribonuclease RuvC U876_16705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold U876_16725 PF11842 Domain of unknown function (DUF3362) U876_16725 PF08497 Radical SAM N-terminal U876_16725 PF04055 Radical SAM superfamily U876_16735 PF00873 AcrB/AcrD/AcrF family U876_16740 PF00529 HlyD membrane-fusion protein of T1SS U876_16740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion U876_16745 PF00990 Diguanylate cyclase, GGDEF domain U876_16750 PF01734 Patatin-like phospholipase U876_16755 PF00209 Sodium:neurotransmitter symporter family U876_16770 PF00691 OmpA family U876_16770 PF01389 OmpA-like transmembrane domain U876_16775 PF00691 OmpA family U876_16775 PF01389 OmpA-like transmembrane domain U876_16780 PF00691 OmpA family U876_16780 PF01389 OmpA-like transmembrane domain U876_16785 PF00390 Malic enzyme, N-terminal domain U876_16785 PF03949 Malic enzyme, NAD binding domain U876_16790 PF12833 Helix-turn-helix domain U876_16795 PF01554 MatE U876_16800 PF10692 Protein of unknown function (DUF2498) U876_16805 PF00990 Diguanylate cyclase, GGDEF domain U876_16805 PF00072 Response regulator receiver domain U876_16810 PF00860 Permease family U876_16820 PF01235 Sodium:alanine symporter family U876_16825 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain U876_16825 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain U876_16830 PF01699 Sodium/calcium exchanger protein U876_16835 PF08534 Redoxin U876_16845 PF00293 NUDIX domain U876_16865 PF00005 ABC transporter U876_16870 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase U876_16870 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase U876_16875 PF03932 CutC family U876_16880 PF00480 ROK family U876_16890 PF01435 Peptidase family M48 U876_16895 PF12849 PBP superfamily domain U876_16900 PF11808 Phosphate regulon sensor protein PhoR U876_16900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_16900 PF00512 His Kinase A (phospho-acceptor) domain U876_16900 PF00989 PAS fold U876_16905 PF00486 Transcriptional regulatory protein, C terminal U876_16905 PF00072 Response regulator receiver domain U876_16910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily U876_16915 PF02515 CoA-transferase family III U876_16920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain U876_16920 PF02770 Acyl-CoA dehydrogenase, middle domain U876_16920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain U876_16925 PF01590 GAF domain U876_16925 PF02954 Bacterial regulatory protein, Fis family U876_16925 PF00158 Sigma-54 interaction domain U876_16930 PF00171 Aldehyde dehydrogenase family U876_16940 PF00892 EamA-like transporter family U876_16945 PF00072 Response regulator receiver domain U876_16945 PF12431 Transcriptional regulator U876_16950 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain U876_16950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_16950 PF00989 PAS fold U876_16950 PF17203 Single cache domain 3 U876_16955 PF00390 Malic enzyme, N-terminal domain U876_16955 PF03949 Malic enzyme, NAD binding domain U876_16960 PF03390 2-hydroxycarboxylate transporter family U876_16970 PF01047 MarR family U876_16975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion U876_16975 PF00529 HlyD membrane-fusion protein of T1SS U876_17000 PF01679 Proteolipid membrane potential modulator U876_17010 PF03477 ATP cone domain U876_17010 PF13597 Anaerobic ribonucleoside-triphosphate reductase U876_17020 PF03120 NAD-dependent DNA ligase OB-fold domain U876_17020 PF12826 Helix-hairpin-helix motif U876_17020 PF03119 NAD-dependent DNA ligase C4 zinc finger domain U876_17020 PF01653 NAD-dependent DNA ligase adenylation domain U876_17020 PF00533 BRCA1 C Terminus (BRCT) domain U876_17025 PF04354 ZipA, C-terminal FtsZ-binding domain U876_17030 PF06470 SMC proteins Flexible Hinge Domain U876_17030 PF02463 RecF/RecN/SMC N terminal domain U876_17040 PF03458 UPF0126 domain U876_17050 PF05951 Bacterial protein of unknown function (DUF882) U876_17055 PF01471 Putative peptidoglycan binding domain U876_17055 PF03734 L,D-transpeptidase catalytic domain U876_17070 PF00535 Glycosyl transferase family 2 U876_17085 PF00128 Alpha amylase, catalytic domain U876_17095 PF00072 Response regulator receiver domain U876_17095 PF00196 Bacterial regulatory proteins, luxR family U876_17115 PF00999 Sodium/hydrogen exchanger family U876_17115 PF02080 TrkA-C domain U876_17115 PF02254 TrkA-N domain U876_17120 PF00990 Diguanylate cyclase, GGDEF domain U876_17125 PF09179 TilS substrate binding domain U876_17125 PF01171 PP-loop family U876_17125 PF11734 TilS substrate C-terminal domain U876_17130 PF05649 Peptidase family M13 U876_17130 PF01431 Peptidase family M13 U876_17140 PF12848 ABC transporter U876_17140 PF16326 ABC transporter C-terminal domain U876_17140 PF00005 ABC transporter U876_17145 PF13302 Acetyltransferase (GNAT) domain U876_17150 PF13520 Amino acid permease U876_17155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_17155 PF03466 LysR substrate binding domain U876_17160 PF12706 Beta-lactamase superfamily domain U876_17170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_17170 PF03466 LysR substrate binding domain U876_17180 PF08543 Phosphomethylpyrimidine kinase U876_17185 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain U876_17185 PF01276 Orn/Lys/Arg decarboxylase, major domain U876_17185 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain U876_17190 PF13520 Amino acid permease U876_17195 PF00486 Transcriptional regulatory protein, C terminal U876_17195 PF18500 CadC C-terminal domain 1 U876_17200 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit U876_17205 PF07733 Bacterial DNA polymerase III alpha NTPase domain U876_17205 PF17657 Bacterial DNA polymerase III alpha subunit finger domain U876_17205 PF14579 Helix-hairpin-helix motif U876_17205 PF02811 PHP domain U876_17205 PF01336 OB-fold nucleic acid binding domain U876_17210 PF01351 Ribonuclease HII U876_17215 PF02684 Lipid-A-disaccharide synthetase U876_17220 PF00132 Bacterial transferase hexapeptide (six repeats) U876_17220 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 U876_17225 PF07977 FabA-like domain U876_17230 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD U876_17230 PF00132 Bacterial transferase hexapeptide (six repeats) U876_17235 PF03938 Outer membrane protein (OmpH-like) U876_17240 PF07244 Surface antigen variable number repeat U876_17240 PF01103 Surface antigen U876_17245 PF02163 Peptidase family M50 U876_17245 PF17820 PDZ domain U876_17255 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain U876_17255 PF13288 DXP reductoisomerase C-terminal domain U876_17255 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase U876_17265 PF01255 Putative undecaprenyl diphosphate synthase U876_17270 PF01765 Ribosome recycling factor U876_17275 PF00696 Amino acid kinase family U876_17280 PF00889 Elongation factor TS U876_17285 PF00318 Ribosomal protein S2 U876_17290 PF00557 Metallopeptidase family M24 U876_17295 PF01842 ACT domain U876_17295 PF08335 GlnD PII-uridylyltransferase U876_17295 PF01966 HD domain U876_17295 PF01909 Nucleotidyltransferase domain U876_17300 PF14602 Hexapeptide repeat of succinyl-transferase U876_17300 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal U876_17300 PF00132 Bacterial transferase hexapeptide (six repeats) U876_17305 PF11944 Protein of unknown function (DUF3461) U876_17310 PF00367 phosphotransferase system, EIIB U876_17310 PF02378 Phosphotransferase system, EIIC U876_17315 PF07148 Maltose operon periplasmic protein precursor (MalM) U876_17320 PF02264 LamB porin U876_17325 PF00258 Flavodoxin U876_17330 PF00849 RNA pseudouridylate synthase U876_17335 PF04287 tRNA pseudouridine synthase C U876_17360 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) U876_17365 PF07348 Syd protein (SUKH-2) U876_17370 PF14489 QueF-like protein U876_17370 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term U876_17380 PF00990 Diguanylate cyclase, GGDEF domain U876_17380 PF07694 5TMR of 5TMR-LYT U876_17385 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases U876_17385 PF11892 Domain of unknown function (DUF3412) U876_17385 PF03641 Possible lysine decarboxylase U876_17390 PF01367 5'-3' exonuclease, C-terminal SAM fold U876_17390 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain U876_17395 PF00180 Isocitrate/isopropylmalate dehydrogenase U876_17395 PF18324 Hypothetical protein TT1725 U876_17405 PF01728 FtsJ-like methyltransferase U876_17405 PF18125 RlmM ferredoxin-like domain U876_17410 PF04241 Protein of unknown function (DUF423) U876_17420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_17420 PF03466 LysR substrate binding domain U876_17425 PF00672 HAMP domain U876_17425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_17430 PF00817 impB/mucB/samB family U876_17430 PF11799 impB/mucB/samB family C-terminal domain U876_17430 PF11798 IMS family HHH motif U876_17445 PF02424 ApbE family U876_17450 PF00175 Oxidoreductase NAD-binding domain U876_17450 PF00970 Oxidoreductase FAD-binding domain U876_17450 PF00111 2Fe-2S iron-sulfur cluster binding domain U876_17455 PF02508 Rnf-Nqr subunit, membrane protein U876_17460 PF02508 Rnf-Nqr subunit, membrane protein U876_17465 PF04205 FMN-binding domain U876_17470 PF03116 NQR2, RnfD, RnfE family U876_17475 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) U876_17475 PF11973 NQRA C-terminal domain U876_17480 PF01722 BolA-like protein U876_17485 PF05175 Methyltransferase small domain U876_17495 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD U876_17505 PF07690 Major Facilitator Superfamily U876_17510 PF03502 Nucleoside-specific channel-forming protein, Tsx U876_17515 PF04461 Protein of unknown function (DUF520) U876_17520 PF02558 Ketopantoate reductase PanE/ApbA U876_17520 PF08546 Ketopantoate reductase PanE/ApbA C terminal U876_17525 PF01965 DJ-1/PfpI family U876_17530 PF00205 Thiamine pyrophosphate enzyme, central domain U876_17530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain U876_17530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain U876_17535 PF03306 Alpha-acetolactate decarboxylase U876_17540 PF03466 LysR substrate binding domain U876_17540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_17560 PF04717 Type VI secretion system, phage-baseplate injector U876_17565 PF05638 Type VI secretion system effector, Hcp U876_17570 PF00196 Bacterial regulatory proteins, luxR family U876_17570 PF03472 Autoinducer binding domain U876_17580 PF13462 Thioredoxin U876_17580 PF06965 Na+/H+ antiporter 1 U876_17585 PF16363 GDP-mannose 4,6 dehydratase U876_17590 PF00042 Globin U876_17590 PF00175 Oxidoreductase NAD-binding domain U876_17590 PF00970 Oxidoreductase FAD-binding domain U876_17595 PF03063 Prismane/CO dehydrogenase family U876_17600 PF00210 Ferritin-like domain U876_17640 PF00106 short chain dehydrogenase U876_17650 PF03441 FAD binding domain of DNA photolyase U876_17650 PF00875 DNA photolyase U876_17655 PF13411 MerR HTH family regulatory protein U876_17660 PF08349 Protein of unknown function (DUF1722) U876_17690 PF01817 Chorismate mutase type II U876_17690 PF00800 Prephenate dehydratase U876_17740 PF04717 Type VI secretion system, phage-baseplate injector U876_17750 PF05638 Type VI secretion system effector, Hcp U876_17835 PF04002 RadC-like JAB domain U876_17885 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A U876_17915 PF00665 Integrase core domain U876_17920 PF13936 Helix-turn-helix domain U876_17920 PF00665 Integrase core domain U876_17940 PF09588 YqaJ-like viral recombinase domain U876_17985 PF04002 RadC-like JAB domain U876_17995 PF04055 Radical SAM superfamily U876_18000 PF06508 Queuosine biosynthesis protein QueC U876_18020 PF09382 RQC domain U876_18020 PF16124 RecQ zinc-binding U876_18020 PF00570 HRDC domain U876_18020 PF00271 Helicase conserved C-terminal domain U876_18020 PF00270 DEAD/DEAH box helicase U876_18040 PF00570 HRDC domain U876_18040 PF00271 Helicase conserved C-terminal domain U876_18040 PF16124 RecQ zinc-binding U876_18040 PF09382 RQC domain U876_18040 PF00270 DEAD/DEAH box helicase U876_18045 PF00176 SNF2 family N-terminal domain U876_18045 PF18339 RapA N-terminal Tudor like domain 1 U876_18045 PF18337 RapA N-terminal Tudor like domain U876_18045 PF00271 Helicase conserved C-terminal domain U876_18045 PF12137 RNA polymerase recycling family C-terminal U876_18070 PF00593 TonB dependent receptor U876_18070 PF07715 TonB-dependent Receptor Plug Domain U876_18090 PF00005 ABC transporter U876_18095 PF01590 GAF domain U876_18095 PF00158 Sigma-54 interaction domain U876_18130 PF13649 Methyltransferase domain U876_18135 PF00872 Transposase, Mutator family U876_18155 PF03976 Polyphosphate kinase 2 (PPK2) U876_18160 PF01740 STAS domain U876_18160 PF00916 Sulfate permease family U876_18165 PF07995 Glucose / Sorbosone dehydrogenase U876_18175 PF02743 Cache domain U876_18175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_18175 PF00672 HAMP domain U876_18180 PF03573 outer membrane porin, OprD family U876_18185 PF00106 short chain dehydrogenase U876_18210 PF02074 Carboxypeptidase Taq (M32) metallopeptidase U876_18220 PF06029 AlkA N-terminal domain U876_18220 PF12833 Helix-turn-helix domain U876_18220 PF00730 HhH-GPD superfamily base excision DNA repair protein U876_18220 PF02805 Metal binding domain of Ada U876_18225 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain U876_18225 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain U876_18230 PF01136 Peptidase family U32 U876_18230 PF12392 Collagenase U876_18235 PF01810 LysE type translocator U876_18240 PF03466 LysR substrate binding domain U876_18240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_18250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_18250 PF00672 HAMP domain U876_18250 PF02743 Cache domain U876_18255 PF00072 Response regulator receiver domain U876_18265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_18265 PF01584 CheW-like domain U876_18265 PF07194 P2 response regulator binding domain U876_18265 PF01627 Hpt domain U876_18265 PF02895 Signal transducing histidine kinase, homodimeric domain U876_18270 PF00672 HAMP domain U876_18270 PF12729 Four helix bundle sensory module for signal transduction U876_18270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_18275 PF01584 CheW-like domain U876_18280 PF00672 HAMP domain U876_18280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_18280 PF02203 Tar ligand binding domain homologue U876_18285 PF01739 CheR methyltransferase, SAM binding domain U876_18285 PF03705 CheR methyltransferase, all-alpha domain U876_18290 PF03975 CheD chemotactic sensory transduction U876_18295 PF00072 Response regulator receiver domain U876_18295 PF01339 CheB methylesterase U876_18300 PF00266 Aminotransferase class-V U876_18330 PF00990 Diguanylate cyclase, GGDEF domain U876_18330 PF00989 PAS fold U876_18330 PF00563 EAL domain U876_18330 PF01590 GAF domain U876_18340 PF12838 4Fe-4S dicluster domain U876_18350 PF01168 Alanine racemase, N-terminal domain U876_18350 PF00842 Alanine racemase, C-terminal domain U876_18355 PF00772 DnaB-like helicase N terminal domain U876_18355 PF03796 DnaB-like helicase C terminal domain U876_18370 PF12792 CSS motif domain associated with EAL U876_18370 PF00563 EAL domain U876_18375 PF02872 5'-nucleotidase, C-terminal domain U876_18375 PF00149 Calcineurin-like phosphoesterase U876_18395 PF00158 Sigma-54 interaction domain U876_18395 PF00072 Response regulator receiver domain U876_18395 PF02954 Bacterial regulatory protein, Fis family U876_18400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase U876_18400 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase U876_18410 PF04102 SlyX U876_18415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase U876_18420 PF09526 Probable metal-binding protein (DUF2387) U876_18430 PF00072 Response regulator receiver domain U876_18430 PF01584 CheW-like domain U876_18435 PF00561 alpha/beta hydrolase fold U876_18440 PF00990 Diguanylate cyclase, GGDEF domain U876_18440 PF01590 GAF domain U876_18440 PF00563 EAL domain U876_18440 PF00360 Phytochrome region U876_18445 PF06794 Uncharacterised protein family (UPF0270) U876_18450 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain U876_18450 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain U876_18450 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain U876_18455 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family U876_18460 PF00535 Glycosyl transferase family 2 U876_18465 PF01370 NAD dependent epimerase/dehydratase family U876_18465 PF02911 Formyl transferase, C-terminal domain U876_18465 PF00551 Formyl transferase U876_18470 PF01522 Polysaccharide deacetylase U876_18475 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase U876_18480 PF00892 EamA-like transporter family U876_18485 PF00893 Small Multidrug Resistance protein U876_18490 PF00485 Phosphoribulokinase / Uridine kinase family U876_18505 PF02566 OsmC-like protein U876_18510 PF13545 Crp-like helix-turn-helix domain U876_18510 PF00027 Cyclic nucleotide-binding domain U876_18515 PF13847 Methyltransferase domain U876_18520 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading U876_18520 PF18416 N-acetylglucosamine binding protein domain 2 U876_18525 PF12561 ToxR activated gene A lipoprotein domain U876_18525 PF17945 Beta/Gamma crystallin U876_18530 PF08329 Chitinase A, N-terminal domain U876_18530 PF00704 Glycosyl hydrolases family 18 U876_18535 PF00512 His Kinase A (phospho-acceptor) domain U876_18535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_18535 PF00989 PAS fold U876_18545 PF13443 Cro/C1-type HTH DNA-binding domain U876_18550 PF12832 MFS_1 like family U876_18555 PF07715 TonB-dependent Receptor Plug Domain U876_18555 PF00593 TonB dependent receptor U876_18575 PF01243 Pyridoxamine 5'-phosphate oxidase U876_18580 PF06228 Haem utilisation ChuX/HutX U876_18590 PF01032 FecCD transport family U876_18595 PF00005 ABC transporter U876_18605 PF01370 NAD dependent epimerase/dehydratase family U876_18615 PF01791 DeoC/LacD family aldolase U876_18620 PF01773 Na+ dependent nucleoside transporter N-terminus U876_18620 PF07662 Na+ dependent nucleoside transporter C-terminus U876_18620 PF07670 Nucleoside recognition U876_18625 PF01048 Phosphorylase superfamily U876_18630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_18630 PF03466 LysR substrate binding domain U876_18645 PF01464 Transglycosylase SLT domain U876_18650 PF01048 Phosphorylase superfamily U876_18750 PF01343 Peptidase family S49 U876_18765 PF03354 Phage Terminase U876_18805 PF00004 ATPase family associated with various cellular activities (AAA) U876_18810 PF01555 DNA methylase U876_18895 PF01381 Helix-turn-helix U876_18895 PF00717 Peptidase S24-like U876_18940 PF12167 Arm DNA-binding domain U876_18940 PF00589 Phage integrase family U876_18945 PF00005 ABC transporter U876_18945 PF12848 ABC transporter U876_18955 PF00860 Permease family U876_18960 PF05099 Tellurite resistance protein TerB U876_18960 PF00226 DnaJ domain U876_18965 PF00483 Nucleotidyl transferase U876_18970 PF01636 Phosphotransferase enzyme family U876_18975 PF03968 OstA-like protein U876_18975 PF04453 LPS transport system D U876_18980 PF00639 PPIC-type PPIASE domain U876_18980 PF09312 SurA N-terminal domain U876_18985 PF04166 Pyridoxal phosphate biosynthetic protein PdxA U876_18990 PF00398 Ribosomal RNA adenine dimethylase U876_18995 PF04379 ApaG domain U876_19000 PF00149 Calcineurin-like phosphoesterase U876_19010 PF00296 Luciferase-like monooxygenase U876_19030 PF00501 AMP-binding enzyme U876_19030 PF13193 AMP-binding enzyme C-terminal domain U876_19040 PF01926 50S ribosome-binding GTPase U876_19040 PF01018 GTP1/OBG U876_19045 PF01016 Ribosomal L27 protein U876_19050 PF00829 Ribosomal prokaryotic L21 protein U876_19055 PF00348 Polyprenyl synthetase U876_19060 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) U876_19065 PF01145 SPFH domain / Band 7 family U876_19070 PF12221 Bacterial membrane protein N terminal U876_19070 PF01145 SPFH domain / Band 7 family U876_19075 PF01926 50S ribosome-binding GTPase U876_19075 PF13167 GTP-binding GTPase N-terminal U876_19075 PF16360 GTP-binding GTPase Middle Region U876_19080 PF17209 Hfq protein U876_19090 PF01119 DNA mismatch repair protein, C-terminal domain U876_19090 PF08676 MutL C terminal dimerisation domain U876_19100 PF01520 N-acetylmuramoyl-L-alanine amidase U876_19105 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE U876_19110 PF03853 YjeF-related protein N-terminus U876_19110 PF01256 Carbohydrate kinase U876_19115 PF08331 Domain of unknown function (DUF1730) U876_19120 PF00480 ROK family U876_19130 PF09383 NIL domain U876_19130 PF00005 ABC transporter U876_19135 PF00528 Binding-protein-dependent transport system inner membrane component U876_19140 PF03180 NLPA lipoprotein U876_19145 PF02357 Transcription termination factor nusG U876_19150 PF00672 HAMP domain U876_19150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_19150 PF12729 Four helix bundle sensory module for signal transduction U876_19155 PF00990 Diguanylate cyclase, GGDEF domain U876_19155 PF00563 EAL domain U876_19155 PF03707 Bacterial signalling protein N terminal repeat U876_19160 PF00072 Response regulator receiver domain U876_19160 PF09456 RcsC Alpha-Beta-Loop (ABL) U876_19160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_19160 PF00512 His Kinase A (phospho-acceptor) domain U876_19170 PF01966 HD domain U876_19170 PF13286 Phosphohydrolase-associated domain U876_19175 PF00989 PAS fold U876_19175 PF00072 Response regulator receiver domain U876_19175 PF18415 Histidine kinase receptor ArcB trans-membrane domain U876_19175 PF00512 His Kinase A (phospho-acceptor) domain U876_19175 PF01627 Hpt domain U876_19175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_19195 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) U876_19200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_19200 PF03466 LysR substrate binding domain U876_19210 PF01259 SAICAR synthetase U876_19215 PF06804 NlpB/DapX lipoprotein U876_19220 PF00701 Dihydrodipicolinate synthetase family U876_19225 PF01842 ACT domain U876_19230 PF00578 AhpC/TSA family U876_19235 PF03887 YfbU domain U876_19240 PF04217 Protein of unknown function, DUF412 U876_19245 PF00871 Acetokinase family U876_19250 PF01515 Phosphate acetyl/butaryl transferase U876_19250 PF07085 DRTGG domain U876_19255 PF10369 Small subunit of acetolactate synthase U876_19260 PF00205 Thiamine pyrophosphate enzyme, central domain U876_19260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain U876_19260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain U876_19275 PF01569 PAP2 superfamily U876_19285 PF08502 LeuA allosteric (dimerisation) domain U876_19285 PF00682 HMGL-like U876_19290 PF00180 Isocitrate/isopropylmalate dehydrogenase U876_19295 PF00330 Aconitase family (aconitate hydratase) U876_19300 PF00694 Aconitase C-terminal domain U876_19320 PF00528 Binding-protein-dependent transport system inner membrane component U876_19325 PF00005 ABC transporter U876_19330 PF13638 PIN domain U876_19330 PF02562 PhoH-like protein U876_19340 PF08343 Ribonucleotide reductase N-terminal U876_19340 PF00317 Ribonucleotide reductase, all-alpha domain U876_19340 PF02867 Ribonucleotide reductase, barrel domain U876_19370 PF18337 RapA N-terminal Tudor like domain U876_19370 PF00271 Helicase conserved C-terminal domain U876_19370 PF18339 RapA N-terminal Tudor like domain 1 U876_19370 PF12137 RNA polymerase recycling family C-terminal U876_19370 PF00176 SNF2 family N-terminal domain U876_19375 PF00849 RNA pseudouridylate synthase U876_19385 PF13188 PAS domain U876_19385 PF00563 EAL domain U876_19385 PF03707 Bacterial signalling protein N terminal repeat U876_19385 PF00990 Diguanylate cyclase, GGDEF domain U876_19395 PF00118 TCP-1/cpn60 chaperonin family U876_19400 PF00166 Chaperonin 10 Kd subunit U876_19405 PF01554 MatE U876_19410 PF04186 FxsA cytoplasmic membrane protein U876_19415 PF00206 Lyase U876_19415 PF10415 Fumarase C C-terminus U876_19420 PF03605 Anaerobic c4-dicarboxylate membrane transporter U876_19425 PF00267 Gram-negative porin U876_19430 PF07690 Major Facilitator Superfamily U876_19435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_19435 PF03466 LysR substrate binding domain U876_19440 PF01447 Thermolysin metallopeptidase, catalytic domain U876_19440 PF02868 Thermolysin metallopeptidase, alpha-helical domain U876_19440 PF04151 Bacterial pre-peptidase C-terminal domain U876_19440 PF07504 Fungalysin/Thermolysin Propeptide Motif U876_19440 PF03413 Peptidase propeptide and YPEB domain U876_19455 PF13302 Acetyltransferase (GNAT) domain U876_19465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold U876_19465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain U876_19470 PF07690 Major Facilitator Superfamily U876_19475 PF01725 Ham1 family U876_19480 PF06969 HemN C-terminal domain U876_19480 PF04055 Radical SAM superfamily U876_19485 PF03889 Alternative ribosome-rescue factor A U876_19490 PF01872 RibD C-terminal domain U876_19495 PF13411 MerR HTH family regulatory protein U876_19500 PF02142 MGS-like domain U876_19500 PF01808 AICARFT/IMPCHase bienzyme U876_19505 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain U876_19505 PF02843 Phosphoribosylglycinamide synthetase, C domain U876_19505 PF02844 Phosphoribosylglycinamide synthetase, N domain U876_19520 PF00128 Alpha amylase, catalytic domain U876_19535 PF03979 Sigma-70 factor, region 1.1 U876_19535 PF04546 Sigma-70, non-essential region U876_19535 PF00140 Sigma-70 factor, region 1.2 U876_19535 PF04545 Sigma-70, region 4 U876_19535 PF04542 Sigma-70 region 2 U876_19535 PF04539 Sigma-70 region 3 U876_19540 PF08278 DNA primase DnaG DnaB-binding U876_19540 PF10410 DnaB-helicase binding domain of primase U876_19540 PF01807 CHC2 zinc finger U876_19540 PF08275 DNA primase catalytic core, N-terminal domain U876_19545 PF09424 Yqey-like protein U876_19550 PF01165 Ribosomal protein S21 U876_19555 PF00814 Glycoprotease family U876_19560 PF00140 Sigma-70 factor, region 1.2 U876_19560 PF04539 Sigma-70 region 3 U876_19560 PF04542 Sigma-70 region 2 U876_19560 PF04545 Sigma-70, region 4 U876_19570 PF09335 SNARE associated Golgi protein U876_19580 PF01975 Survival protein SurE U876_19585 PF01142 tRNA pseudouridine synthase D (TruD) U876_19590 PF02542 YgbB family U876_19595 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase U876_19600 PF04977 Septum formation initiator U876_19605 PF00113 Enolase, C-terminal TIM barrel domain U876_19605 PF03952 Enolase, N-terminal domain U876_19610 PF00117 Glutamine amidotransferase class-I U876_19610 PF06418 CTP synthase N-terminus U876_19615 PF03819 MazG nucleotide pyrophosphohydrolase domain U876_19620 PF04607 Region found in RelA / SpoT proteins U876_19620 PF13291 ACT domain U876_19620 PF02824 TGS domain U876_19625 PF05958 tRNA (Uracil-5-)-methyltransferase U876_19625 PF01938 TRAM domain U876_19630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_19630 PF00512 His Kinase A (phospho-acceptor) domain U876_19630 PF00672 HAMP domain U876_19630 PF01627 Hpt domain U876_19630 PF00072 Response regulator receiver domain U876_19630 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) U876_19635 PF07308 Protein of unknown function (DUF1456) U876_19640 PF01510 N-acetylmuramoyl-L-alanine amidase U876_19645 PF00455 DeoR C terminal sensor domain U876_19645 PF08220 DeoR-like helix-turn-helix domain U876_19650 PF08013 Tagatose 6 phosphate kinase U876_19655 PF01380 SIS domain U876_19660 PF03830 PTS system sorbose subfamily IIB component U876_19665 PF03609 PTS system sorbose-specific iic component U876_19670 PF03613 PTS system mannose/fructose/sorbose family IID component U876_19675 PF03610 PTS system fructose IIA component U876_19680 PF01979 Amidohydrolase family U876_19685 PF01116 Fructose-bisphosphate aldolase class-II U876_19695 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ U876_19700 PF11967 Recombination protein O N terminal U876_19700 PF02565 Recombination protein O C terminal U876_19705 PF07650 KH domain U876_19705 PF01926 50S ribosome-binding GTPase U876_19710 PF00035 Double-stranded RNA binding motif U876_19710 PF14622 Ribonuclease-III-like U876_19715 PF10502 Signal peptidase, peptidase S26 U876_19720 PF03144 Elongation factor Tu domain 2 U876_19720 PF00009 Elongation factor Tu GTP binding domain U876_19720 PF06421 GTP-binding protein LepA C-terminus U876_19720 PF00679 Elongation factor G C-terminus U876_19730 PF03888 MucB/RseB N-terminal domain U876_19730 PF17188 MucB/RseB C-terminal domain U876_19735 PF03873 Anti sigma-E protein RseA, C-terminal domain U876_19735 PF03872 Anti sigma-E protein RseA, N-terminal domain U876_19740 PF08281 Sigma-70, region 4 U876_19740 PF04542 Sigma-70 region 2 U876_19745 PF02910 Fumarate reductase flavoprotein C-term U876_19745 PF00890 FAD binding domain U876_19755 PF03937 Flavinator of succinate dehydrogenase U876_19760 PF01571 Aminomethyltransferase folate-binding domain U876_19765 PF03466 LysR substrate binding domain U876_19765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_19780 PF03091 CutA1 divalent ion tolerance protein U876_19785 PF02683 Cytochrome C biogenesis protein transmembrane region U876_19785 PF11412 Disulphide bond corrector protein DsbC U876_19795 PF01266 FAD dependent oxidoreductase U876_19800 PF01116 Fructose-bisphosphate aldolase class-II U876_19805 PF00162 Phosphoglycerate kinase U876_19810 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain U876_19810 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain U876_19815 PF00480 ROK family U876_19820 PF01208 Uroporphyrinogen decarboxylase (URO-D) U876_19825 PF09297 NADH pyrophosphatase zinc ribbon domain U876_19825 PF00293 NUDIX domain U876_19830 PF18327 Proline utilization A proline dehydrogenase N-terminal domain U876_19830 PF14850 DNA-binding domain of Proline dehydrogenase U876_19830 PF01619 Proline dehydrogenase U876_19830 PF00171 Aldehyde dehydrogenase family U876_19835 PF08239 Bacterial SH3 domain U876_19840 PF00520 Ion transport protein U876_19840 PF00027 Cyclic nucleotide-binding domain U876_19845 PF02743 Cache domain U876_19845 PF00672 HAMP domain U876_19845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_19855 PF08335 GlnD PII-uridylyltransferase U876_19855 PF03710 Glutamate-ammonia ligase adenylyltransferase U876_19875 PF00326 Prolyl oligopeptidase family U876_19875 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain U876_19880 PF00291 Pyridoxal-phosphate dependent enzyme U876_19885 PF00528 Binding-protein-dependent transport system inner membrane component U876_19890 PF00528 Binding-protein-dependent transport system inner membrane component U876_19895 PF00005 ABC transporter U876_19900 PF00497 Bacterial extracellular solute-binding proteins, family 3 U876_19905 PF00005 ABC transporter U876_19905 PF02687 FtsX-like permease family U876_19905 PF12704 MacB-like periplasmic core domain U876_19910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion U876_19915 PF00072 Response regulator receiver domain U876_19915 PF00486 Transcriptional regulatory protein, C terminal U876_19920 PF16527 Two-component sensor protein CpxA, periplasmic domain U876_19920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_19920 PF00512 His Kinase A (phospho-acceptor) domain U876_19920 PF00672 HAMP domain U876_19925 PF00293 NUDIX domain U876_19925 PF09297 NADH pyrophosphatase zinc ribbon domain U876_19925 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain U876_19955 PF03060 Nitronate monooxygenase U876_19965 PF00445 Ribonuclease T2 family U876_19980 PF03150 Di-haem cytochrome c peroxidase U876_19980 PF00034 Cytochrome c U876_19985 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase U876_20000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_20000 PF03466 LysR substrate binding domain U876_20005 PF00271 Helicase conserved C-terminal domain U876_20005 PF00270 DEAD/DEAH box helicase U876_20015 PF00753 Metallo-beta-lactamase superfamily U876_20035 PF01425 Amidase U876_20040 PF04371 Porphyromonas-type peptidyl-arginine deiminase U876_20045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_20045 PF03466 LysR substrate binding domain U876_20055 PF00724 NADH:flavin oxidoreductase / NADH oxidase family U876_20060 PF00583 Acetyltransferase (GNAT) family U876_20080 PF16658 Class II release factor RF3, C-terminal domain U876_20080 PF03144 Elongation factor Tu domain 2 U876_20080 PF00009 Elongation factor Tu GTP binding domain U876_20085 PF00990 Diguanylate cyclase, GGDEF domain U876_20085 PF00072 Response regulator receiver domain U876_20090 PF00563 EAL domain U876_20090 PF00990 Diguanylate cyclase, GGDEF domain U876_20090 PF13426 PAS domain U876_20095 PF05762 VWA domain containing CoxE-like protein U876_20100 PF12592 Protein of unknown function (DUF3763) U876_20100 PF17868 AAA lid domain U876_20100 PF07728 AAA domain (dynein-related subfamily) U876_20110 PF00583 Acetyltransferase (GNAT) family U876_20120 PF00501 AMP-binding enzyme U876_20130 PF04262 Glutamate-cysteine ligase U876_20135 PF05193 Peptidase M16 inactive domain U876_20135 PF00675 Insulinase (Peptidase family M16) U876_20140 PF09335 SNARE associated Golgi protein U876_20145 PF08240 Alcohol dehydrogenase GroES-like domain U876_20145 PF00698 Acyl transferase domain U876_20145 PF00550 Phosphopantetheine attachment site U876_20145 PF14765 Polyketide synthase dehydratase U876_20145 PF16197 Ketoacyl-synthetase C-terminal extension U876_20145 PF00109 Beta-ketoacyl synthase, N-terminal domain U876_20145 PF08990 Erythronolide synthase docking U876_20145 PF02801 Beta-ketoacyl synthase, C-terminal domain U876_20145 PF08659 KR domain U876_20165 PF00970 Oxidoreductase FAD-binding domain U876_20165 PF00175 Oxidoreductase NAD-binding domain U876_20170 PF03948 Ribosomal protein L9, C-terminal domain U876_20170 PF01281 Ribosomal protein L9, N-terminal domain U876_20175 PF01084 Ribosomal protein S18 U876_20180 PF01250 Ribosomal protein S6 U876_20185 PF01566 Natural resistance-associated macrophage protein U876_20205 PF13673 Acetyltransferase (GNAT) domain U876_20215 PF08032 RNA 2'-O ribose methyltransferase substrate binding U876_20215 PF00588 SpoU rRNA Methylase family U876_20220 PF17876 Cold shock domain U876_20220 PF08206 Ribonuclease B OB domain U876_20220 PF00575 S1 RNA binding domain U876_20220 PF00773 RNB domain U876_20220 PF08461 Ribonuclease R winged-helix domain U876_20225 PF00990 Diguanylate cyclase, GGDEF domain U876_20230 PF02664 S-Ribosylhomocysteinase (LuxS) U876_20240 PF00543 Nitrogen regulatory protein P-II U876_20245 PF02540 NAD synthase U876_20245 PF00795 Carbon-nitrogen hydrolase U876_20280 PF05567 Neisseria PilC beta-propeller domain U876_20305 PF02401 LytB protein U876_20310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase U876_20315 PF01252 Signal peptidase (SPase) II U876_20320 PF08264 Anticodon-binding domain of tRNA U876_20320 PF00133 tRNA synthetases class I (I, L, M and V) U876_20320 PF06827 Zinc finger found in FPG and IleRS U876_20325 PF01687 Riboflavin kinase U876_20325 PF06574 FAD synthetase U876_20330 PF03023 Lipid II flippase MurJ U876_20335 PF01649 Ribosomal protein S20 U876_20340 PF01022 Bacterial regulatory protein, arsR family U876_20345 PF03466 LysR substrate binding domain U876_20345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_20355 PF06965 Na+/H+ antiporter 1 U876_20360 PF00303 Thymidylate synthase U876_20365 PF01790 Prolipoprotein diacylglyceryl transferase U876_20370 PF01590 GAF domain U876_20370 PF02896 PEP-utilising enzyme, TIM barrel domain U876_20370 PF00391 PEP-utilising enzyme, mobile domain U876_20370 PF05524 PEP-utilising enzyme, N-terminal U876_20375 PF00293 NUDIX domain U876_20380 PF02976 DNA mismatch repair enzyme MutH U876_20390 PF01245 Ribosomal protein L19 U876_20395 PF01746 tRNA (Guanine-1)-methyltransferase U876_20400 PF01782 RimM N-terminal domain U876_20400 PF05239 PRC-barrel domain U876_20405 PF00886 Ribosomal protein S16 U876_20410 PF02881 SRP54-type protein, helical bundle domain U876_20410 PF00448 SRP54-type protein, GTPase domain U876_20410 PF02978 Signal peptide binding domain U876_20415 PF01578 Cytochrome C assembly protein U876_20420 PF01595 Cyclin M transmembrane N-terminal domain U876_20420 PF03471 Transporter associated domain U876_20420 PF00571 CBS domain U876_20425 PF02082 Transcriptional regulator U876_20430 PF00970 Oxidoreductase FAD-binding domain U876_20430 PF00042 Globin U876_20430 PF00175 Oxidoreductase NAD-binding domain U876_20435 PF08238 Sel1 repeat U876_20440 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain U876_20440 PF00056 lactate/malate dehydrogenase, NAD binding domain U876_20445 PF00528 Binding-protein-dependent transport system inner membrane component U876_20450 PF00528 Binding-protein-dependent transport system inner membrane component U876_20455 PF00497 Bacterial extracellular solute-binding proteins, family 3 U876_20460 PF00005 ABC transporter U876_20465 PF01316 Arginine repressor, DNA binding domain U876_20465 PF02863 Arginine repressor, C-terminal domain U876_20470 PF04261 Dyp-type peroxidase family U876_20475 PF00005 ABC transporter U876_20475 PF08402 TOBE domain U876_20485 PF13416 Bacterial extracellular solute-binding protein U876_20490 PF00543 Nitrogen regulatory protein P-II U876_20495 PF00472 RF-1 domain U876_20500 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain U876_20500 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain U876_20505 PF01773 Na+ dependent nucleoside transporter N-terminus U876_20505 PF07670 Nucleoside recognition U876_20505 PF07662 Na+ dependent nucleoside transporter C-terminus U876_20510 PF03466 LysR substrate binding domain U876_20510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_20515 PF00255 Glutathione peroxidase U876_20525 PF02595 Glycerate kinase family U876_20530 PF02447 GntP family permease U876_20535 PF13556 PucR C-terminal helix-turn-helix domain U876_20535 PF17853 GGDEF-like domain U876_20535 PF05651 Putative sugar diacid recognition U876_20545 PF06062 Uncharacterised protein family (UPF0231) U876_20560 PF08447 PAS fold U876_20560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_20565 PF03372 Endonuclease/Exonuclease/phosphatase family U876_20580 PF00271 Helicase conserved C-terminal domain U876_20580 PF00270 DEAD/DEAH box helicase U876_20590 PF08534 Redoxin U876_20595 PF00403 Heavy-metal-associated domain U876_20600 PF18494 Pullulanase Ins domain U876_20600 PF17967 Pullulanase N2 domain U876_20600 PF11852 Domain of unknown function (DUF3372) U876_20600 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) U876_20600 PF03714 Bacterial pullanase-associated domain U876_20615 PF02583 Metal-sensitive transcriptional repressor U876_20620 PF00155 Aminotransferase class I and II U876_20625 PF03466 LysR substrate binding domain U876_20625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_20635 PF04055 Radical SAM superfamily U876_20640 PF11230 Protein of unknown function (DUF3029) U876_20660 PF14685 Tricorn protease PDZ domain U876_20660 PF07676 WD40-like Beta Propeller Repeat U876_20660 PF03572 Peptidase family S41 U876_20660 PF14684 Tricorn protease C1 domain U876_20690 PF00672 HAMP domain U876_20690 PF12729 Four helix bundle sensory module for signal transduction U876_20690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_20695 PF18416 N-acetylglucosamine binding protein domain 2 U876_20695 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading U876_20700 PF03466 LysR substrate binding domain U876_20700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_20710 PF00005 ABC transporter U876_20710 PF12857 TOBE-like domain U876_20715 PF00528 Binding-protein-dependent transport system inner membrane component U876_20720 PF00528 Binding-protein-dependent transport system inner membrane component U876_20735 PF13194 Domain of unknown function (DUF4010) U876_20740 PF14602 Hexapeptide repeat of succinyl-transferase U876_20740 PF12464 Maltose acetyltransferase U876_20765 PF00206 Lyase U876_20765 PF14698 Argininosuccinate lyase C-terminal U876_20770 PF00764 Arginosuccinate synthase U876_20775 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain U876_20775 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain U876_20780 PF00696 Amino acid kinase family U876_20785 PF01118 Semialdehyde dehydrogenase, NAD binding domain U876_20785 PF02774 Semialdehyde dehydrogenase, dimerisation domain U876_20790 PF01546 Peptidase family M20/M25/M40 U876_20790 PF07687 Peptidase dimerisation domain U876_20795 PF00311 Phosphoenolpyruvate carboxylase U876_20805 PF00742 Homoserine dehydrogenase U876_20805 PF00696 Amino acid kinase family U876_20805 PF03447 Homoserine dehydrogenase, NAD binding domain U876_20810 PF01053 Cys/Met metabolism PLP-dependent enzyme U876_20815 PF01340 Met Apo-repressor, MetJ U876_20820 PF12833 Helix-turn-helix domain U876_20820 PF06445 GyrI-like small molecule binding domain U876_20825 PF01588 Putative tRNA binding domain U876_20830 PF03222 Tryptophan/tyrosine permease family U876_20835 PF00459 Inositol monophosphatase family U876_20840 PF00293 NUDIX domain U876_20845 PF13419 Haloacid dehalogenase-like hydrolase U876_20850 PF00579 tRNA synthetases class I (W and Y) U876_20850 PF01479 S4 domain U876_20855 PF00196 Bacterial regulatory proteins, luxR family U876_20860 PF01203 Type II secretion system (T2SS), protein N U876_20865 PF04612 Type II secretion system (T2SS), protein M U876_20870 PF05134 Type II secretion system (T2SS), protein L U876_20870 PF12693 GspL periplasmic domain U876_20875 PF03934 Type II secretion system (T2SS), protein K U876_20880 PF11612 Type II secretion system (T2SS), protein J U876_20880 PF07963 Prokaryotic N-terminal methylation motif U876_20885 PF07963 Prokaryotic N-terminal methylation motif U876_20885 PF02501 Type II secretion system (T2SS), protein I U876_20890 PF12019 Type II transport protein GspH U876_20890 PF07963 Prokaryotic N-terminal methylation motif U876_20900 PF07963 Prokaryotic N-terminal methylation motif U876_20900 PF08334 Type II secretion system (T2SS), protein G U876_20905 PF00482 Type II secretion system (T2SS), protein F U876_20910 PF00437 Type II/IV secretion system protein U876_20915 PF03958 Bacterial type II/III secretion system short domain U876_20915 PF00263 Bacterial type II and III secretion system protein U876_20920 PF11356 Type II secretion system protein C U876_20925 PF01479 S4 domain U876_20930 PF01430 Hsp33 protein U876_20940 PF00392 Bacterial regulatory proteins, gntR family U876_20945 PF01321 Creatinase/Prolidase N-terminal domain U876_20945 PF00557 Metallopeptidase family M24 U876_20950 PF11756 Nitrous oxide-stimulated promoter U876_20955 PF00583 Acetyltransferase (GNAT) family U876_20960 PF05433 Glycine zipper 2TM domain U876_20965 PF02872 5'-nucleotidase, C-terminal domain U876_20965 PF00149 Calcineurin-like phosphoesterase U876_20970 PF01810 LysE type translocator U876_20975 PF03472 Autoinducer binding domain U876_20975 PF00196 Bacterial regulatory proteins, luxR family U876_20980 PF00765 Autoinducer synthase U876_20985 PF03466 LysR substrate binding domain U876_20985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_20990 PF08206 Ribonuclease B OB domain U876_20990 PF00773 RNB domain U876_20990 PF17876 Cold shock domain U876_20995 PF00440 Bacterial regulatory proteins, tetR family U876_21010 PF02378 Phosphotransferase system, EIIC U876_21010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit U876_21010 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 U876_21015 PF01232 Mannitol dehydrogenase Rossmann domain U876_21015 PF08125 Mannitol dehydrogenase C-terminal domain U876_21020 PF05068 Mannitol repressor U876_21025 PF02080 TrkA-C domain U876_21025 PF00999 Sodium/hydrogen exchanger family U876_21025 PF03471 Transporter associated domain U876_21045 PF01544 CorA-like Mg2+ transporter protein U876_21050 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 U876_21065 PF04307 LexA-binding, inner membrane-associated putative hydrolase U876_21070 PF01773 Na+ dependent nucleoside transporter N-terminus U876_21070 PF07670 Nucleoside recognition U876_21070 PF07662 Na+ dependent nucleoside transporter C-terminus U876_21075 PF00271 Helicase conserved C-terminal domain U876_21075 PF03880 DbpA RNA binding domain U876_21075 PF00270 DEAD/DEAH box helicase U876_21100 PF01040 UbiA prenyltransferase family U876_21105 PF00425 chorismate binding enzyme U876_21110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain U876_21110 PF16582 Middle domain of thiamine pyrophosphate U876_21110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain U876_21115 PF12697 Alpha/beta hydrolase family U876_21120 PF00378 Enoyl-CoA hydratase/isomerase U876_21125 PF13378 Enolase C-terminal domain-like U876_21130 PF00501 AMP-binding enzyme U876_21140 PF00419 Fimbrial protein U876_21145 PF00419 Fimbrial protein U876_21150 PF02753 Pili assembly chaperone PapD, C-terminal domain U876_21150 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain U876_21155 PF00577 Outer membrane usher protein U876_21155 PF13953 PapC C-terminal domain U876_21155 PF13954 PapC N-terminal domain U876_21165 PF00419 Fimbrial protein U876_21175 PF01752 Collagenase U876_21175 PF08453 Peptidase family M9 N-terminal U876_21180 PF02698 DUF218 domain U876_21185 PF02777 Iron/manganese superoxide dismutases, C-terminal domain U876_21185 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain U876_21195 PF00561 alpha/beta hydrolase fold U876_21200 PF03280 Proteobacterial lipase chaperone protein U876_21215 PF12793 Sugar transport-related sRNA regulator N-term U876_21215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle U876_21225 PF01053 Cys/Met metabolism PLP-dependent enzyme U876_21235 PF00465 Iron-containing alcohol dehydrogenase U876_21250 PF03577 Peptidase family C69 U876_21255 PF00106 short chain dehydrogenase U876_21275 PF02308 MgtC family U876_21280 PF16657 Maltogenic Amylase, C-terminal domain U876_21280 PF00128 Alpha amylase, catalytic domain U876_21280 PF02903 Alpha amylase, N-terminal ig-like domain U876_21295 PF00884 Sulfatase U876_21300 PF01037 Lrp/AsnC ligand binding domain U876_21310 PF04204 Homoserine O-succinyltransferase U876_21315 PF01966 HD domain U876_21315 PF00013 KH domain U876_21315 PF12072 Domain of unknown function (DUF3552) U876_21320 PF02464 Competence-damaged protein U876_21320 PF00994 Probable molybdopterin binding domain U876_21335 PF00005 ABC transporter U876_21355 PF07722 Peptidase C26 U876_21365 PF13545 Crp-like helix-turn-helix domain U876_21365 PF00027 Cyclic nucleotide-binding domain U876_21375 PF13419 Haloacid dehalogenase-like hydrolase U876_21380 PF02899 Phage integrase, N-terminal SAM-like domain U876_21380 PF00589 Phage integrase family U876_21390 PF01678 Diaminopimelate epimerase U876_21395 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain U876_21395 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain U876_21400 PF01491 Frataxin-like domain U876_21405 PF02230 Phospholipase/Carboxylesterase U876_21410 PF01295 Adenylate cyclase, class-I U876_21410 PF12633 Adenylate cyclase NT domain U876_21415 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain U876_21415 PF03900 Porphobilinogen deaminase, C-terminal domain U876_21420 PF02602 Uroporphyrinogen-III synthase HemD U876_21425 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase U876_21435 PF03692 Putative zinc- or iron-chelating domain U876_21440 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded U876_21455 PF00593 TonB dependent receptor U876_21455 PF07715 TonB-dependent Receptor Plug Domain U876_21480 PF01638 HxlR-like helix-turn-helix U876_21485 PF08803 Putative mono-oxygenase ydhR U876_21500 PF06055 Exopolysaccharide synthesis, ExoD U876_21510 PF17151 Periplasmic sensor domain U876_21510 PF00990 Diguanylate cyclase, GGDEF domain U876_21525 PF13036 Peptidoglycan-synthase activator LpoB U876_21540 PF06968 Biotin and Thiamin Synthesis associated domain U876_21540 PF04055 Radical SAM superfamily U876_21545 PF05690 Thiazole biosynthesis protein ThiG U876_21555 PF00899 ThiF family U876_21560 PF02581 Thiamine monophosphate synthase U876_21565 PF13667 ThiC-associated domain U876_21565 PF01964 Radical SAM ThiC family U876_21570 PF01117 Aerolysin toxin U876_21570 PF03440 Aerolysin/Pertussis toxin (APT) domain U876_21585 PF00486 Transcriptional regulatory protein, C terminal U876_21585 PF00072 Response regulator receiver domain U876_21595 PF05525 Branched-chain amino acid transport protein U876_21600 PF08443 RimK-like ATP-grasp domain U876_21600 PF18030 RimK PreATP-grasp domain U876_21605 PF02310 B12 binding domain U876_21605 PF02607 B12 binding domain U876_21605 PF00809 Pterin binding enzyme U876_21605 PF02965 Vitamin B12 dependent methionine synthase, activation domain U876_21605 PF02574 Homocysteine S-methyltransferase U876_21610 PF00999 Sodium/hydrogen exchanger family U876_21645 PF04320 Protein with unknown function (DUF469) U876_21650 PF00419 Fimbrial protein U876_21655 PF01389 OmpA-like transmembrane domain U876_21655 PF00691 OmpA family U876_21660 PF13953 PapC C-terminal domain U876_21660 PF00577 Outer membrane usher protein U876_21660 PF13954 PapC N-terminal domain U876_21665 PF02753 Pili assembly chaperone PapD, C-terminal domain U876_21665 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain U876_21685 PF00419 Fimbrial protein U876_21715 PF08668 HDOD domain U876_21725 PF04228 Putative neutral zinc metallopeptidase U876_21730 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) U876_21745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain U876_21745 PF08447 PAS fold U876_21745 PF13426 PAS domain U876_21750 PF08678 Rsbr N terminal U876_21750 PF01740 STAS domain U876_21755 PF13581 Histidine kinase-like ATPase domain U876_21760 PF01627 Hpt domain U876_21760 PF00512 His Kinase A (phospho-acceptor) domain U876_21760 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) U876_21760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_21760 PF00072 Response regulator receiver domain U876_21760 PF00672 HAMP domain U876_21765 PF00072 Response regulator receiver domain U876_21775 PF07690 Major Facilitator Superfamily U876_21780 PF01914 MarC family integral membrane protein U876_21790 PF13580 SIS domain U876_21795 PF02378 Phosphotransferase system, EIIC U876_21795 PF00367 phosphotransferase system, EIIB U876_21810 PF01380 SIS domain U876_21810 PF01418 Helix-turn-helix domain, rpiR family U876_21815 PF01523 Putative modulator of DNA gyrase U876_21820 PF00795 Carbon-nitrogen hydrolase U876_21830 PF13502 AsmA-like C-terminal region U876_21830 PF13116 Protein of unknown function U876_21835 PF10150 Ribonuclease E/G family U876_21835 PF00575 S1 RNA binding domain U876_21840 PF02545 Maf-like protein U876_21845 PF04093 rod shape-determining protein MreD U876_21850 PF04085 rod shape-determining protein MreC U876_21880 PF07963 Prokaryotic N-terminal methylation motif U876_21880 PF14245 Type IV pilin PilA U876_21885 PF07963 Prokaryotic N-terminal methylation motif U876_21885 PF00114 Pilin (bacterial filament) U876_21900 PF00482 Type II secretion system (T2SS), protein F U876_21905 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain U876_21905 PF00437 Type II/IV secretion system protein U876_21915 PF13401 AAA domain U876_21915 PF09077 Mu B transposition protein, C terminal U876_21920 PF00263 Bacterial type II and III secretion system protein U876_21920 PF03958 Bacterial type II/III secretion system short domain U876_21950 PF00990 Diguanylate cyclase, GGDEF domain U876_21950 PF17157 Gammaproteobacterial periplasmic sensor domain U876_21950 PF00563 EAL domain U876_21955 PF12792 CSS motif domain associated with EAL U876_21955 PF00563 EAL domain U876_21960 PF01699 Sodium/calcium exchanger protein U876_21965 PF00221 Aromatic amino acid lyase U876_21970 PF17392 Urocanase C-terminal domain U876_21970 PF01175 Urocanase Rossmann-like domain U876_21970 PF17391 Urocanase N-terminal domain U876_21975 PF00491 Arginase family U876_21980 PF01979 Amidohydrolase family U876_21985 PF07702 UTRA domain U876_21985 PF00392 Bacterial regulatory proteins, gntR family U876_21990 PF00484 Carbonic anhydrase U876_21995 PF04545 Sigma-70, region 4 U876_21995 PF04542 Sigma-70 region 2 U876_21995 PF00140 Sigma-70 factor, region 1.2 U876_22000 PF18075 FtsX extracellular domain U876_22005 PF00005 ABC transporter U876_22010 PF00448 SRP54-type protein, GTPase domain U876_22010 PF02881 SRP54-type protein, helical bundle domain U876_22030 PF00440 Bacterial regulatory proteins, tetR family U876_22040 PF13091 PLD-like domain U876_22050 PF01464 Transglycosylase SLT domain U876_22065 PF02416 mttA/Hcf106 family U876_22070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_22070 PF03466 LysR substrate binding domain U876_22075 PF01914 MarC family integral membrane protein U876_22080 PF10678 Protein of unknown function (DUF2492) U876_22085 PF00375 Sodium:dicarboxylate symporter family U876_22095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_22095 PF03466 LysR substrate binding domain U876_22100 PF13533 Biotin-lipoyl like U876_22105 PF07690 Major Facilitator Superfamily U876_22110 PF07947 YhhN family U876_22135 PF00326 Prolyl oligopeptidase family U876_22135 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain U876_22150 PF00106 short chain dehydrogenase U876_22155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_22155 PF03466 LysR substrate binding domain U876_22160 PF02525 Flavodoxin-like fold U876_22165 PF00999 Sodium/hydrogen exchanger family U876_22165 PF02254 TrkA-N domain U876_22210 PF01196 Ribosomal protein L17 U876_22215 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain U876_22215 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain U876_22215 PF01000 RNA polymerase Rpb3/RpoA insert domain U876_22220 PF00163 Ribosomal protein S4/S9 N-terminal domain U876_22220 PF01479 S4 domain U876_22225 PF00411 Ribosomal protein S11 U876_22230 PF00416 Ribosomal protein S13/S18 U876_22235 PF00344 SecY translocase U876_22240 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A U876_22245 PF00327 Ribosomal protein L30p/L7e U876_22250 PF03719 Ribosomal protein S5, C-terminal domain U876_22250 PF00333 Ribosomal protein S5, N-terminal domain U876_22255 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast U876_22260 PF00347 Ribosomal protein L6 U876_22265 PF00410 Ribosomal protein S8 U876_22270 PF00253 Ribosomal protein S14p/S29e U876_22275 PF00281 Ribosomal protein L5 U876_22275 PF00673 ribosomal L5P family C-terminus U876_22280 PF00467 KOW motif U876_22280 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 U876_22285 PF00238 Ribosomal protein L14p/L23e U876_22290 PF00366 Ribosomal protein S17 U876_22295 PF00831 Ribosomal L29 protein U876_22300 PF00252 Ribosomal protein L16p/L10e U876_22305 PF00189 Ribosomal protein S3, C-terminal domain U876_22305 PF07650 KH domain U876_22310 PF00237 Ribosomal protein L22p/L17e U876_22315 PF00203 Ribosomal protein S19 U876_22320 PF00181 Ribosomal Proteins L2, RNA binding domain U876_22320 PF03947 Ribosomal Proteins L2, C-terminal domain U876_22325 PF00276 Ribosomal protein L23 U876_22330 PF00573 Ribosomal protein L4/L1 family U876_22335 PF00297 Ribosomal protein L3 U876_22340 PF00338 Ribosomal protein S10p/S20e U876_22350 PF00512 His Kinase A (phospho-acceptor) domain U876_22350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_22350 PF00672 HAMP domain U876_22355 PF00486 Transcriptional regulatory protein, C terminal U876_22355 PF00072 Response regulator receiver domain U876_22360 PF01272 Transcription elongation factor, GreA/GreB, C-term U876_22360 PF03449 Transcription elongation factor, N-terminal U876_22365 PF09371 Tex-like protein N-terminal domain U876_22365 PF17674 HHH domain U876_22365 PF16921 Tex protein YqgF-like domain U876_22365 PF00575 S1 RNA binding domain U876_22385 PF00561 alpha/beta hydrolase fold U876_22390 PF00156 Phosphoribosyl transferase domain U876_22395 PF01106 NifU-like domain U876_22395 PF01521 Iron-sulphur cluster biosynthesis U876_22400 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus U876_22400 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus U876_22405 PF02556 Preprotein translocase subunit SecB U876_22410 PF00581 Rhodanese-like domain U876_22415 PF06415 BPG-independent PGAM N-terminus (iPGM_N) U876_22415 PF01676 Metalloenzyme superfamily U876_22420 PF01551 Peptidase family M23 U876_22430 PF00356 Bacterial regulatory proteins, lacI family U876_22430 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family U876_22435 PF01081 KDPG and KHG aldolase U876_22440 PF00920 Dehydratase family U876_22445 PF01202 Shikimate kinase U876_22450 PF02447 GntP family permease U876_22455 PF13091 PLD-like domain U876_22460 PF00270 DEAD/DEAH box helicase U876_22460 PF00271 Helicase conserved C-terminal domain U876_22460 PF17191 RecG wedge domain U876_22470 PF00583 Acetyltransferase (GNAT) family U876_22470 PF09500 Putative thioesterase (yiiD_Cterm) U876_22480 PF02580 D-Tyr-tRNA(Tyr) deacylase U876_22485 PF03631 Virulence factor BrkB U876_22495 PF03951 Glutamine synthetase, beta-Grasp domain U876_22495 PF00120 Glutamine synthetase, catalytic domain U876_22505 PF00989 PAS fold U876_22505 PF00512 His Kinase A (phospho-acceptor) domain U876_22505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_22510 PF02954 Bacterial regulatory protein, Fis family U876_22510 PF00072 Response regulator receiver domain U876_22510 PF00158 Sigma-54 interaction domain U876_22515 PF00962 Adenosine/AMP deaminase U876_22520 PF06969 HemN C-terminal domain U876_22520 PF04055 Radical SAM superfamily U876_22525 PF10675 Protein of unknown function (DUF2489) U876_22530 PF04220 Der GTPase activator (YihI) U876_22540 PF00034 Cytochrome c U876_22545 PF01926 50S ribosome-binding GTPase U876_22550 PF07369 Protein of unknown function (DUF1488) U876_22555 PF01488 Shikimate / quinate 5-dehydrogenase U876_22555 PF08501 Shikimate dehydrogenase substrate binding domain U876_22555 PF18317 Shikimate 5'-dehydrogenase C-terminal domain U876_22560 PF01218 Coproporphyrinogen III oxidase U876_22565 PF01300 Telomere recombination U876_22570 PF00731 AIR carboxylase U876_22575 PF01396 Topoisomerase DNA binding C4 zinc finger U876_22580 PF04361 Protein of unknown function (DUF494) U876_22585 PF02481 DNA recombination-mediator protein A U876_22585 PF17782 DprA winged helix domain U876_22595 PF01327 Polypeptide deformylase U876_22600 PF02911 Formyl transferase, C-terminal domain U876_22600 PF00551 Formyl transferase U876_22605 PF01189 16S rRNA methyltransferase RsmB/F U876_22605 PF01029 NusB family U876_22610 PF02254 TrkA-N domain U876_22610 PF02080 TrkA-C domain U876_22615 PF02386 Cation transport protein U876_22635 PF02082 Transcriptional regulator U876_22640 PF00294 pfkB family carbohydrate kinase U876_22645 PF05222 Alanine dehydrogenase/PNT, N-terminal domain U876_22645 PF01262 Alanine dehydrogenase/PNT, C-terminal domain U876_22650 PF00117 Glutamine amidotransferase class-I U876_22650 PF02540 NAD synthase U876_22650 PF00958 GMP synthase C terminal domain U876_22655 PF00171 Aldehyde dehydrogenase family U876_22660 PF00202 Aminotransferase class-III U876_22665 PF01381 Helix-turn-helix U876_22665 PF07883 Cupin domain U876_22670 PF00171 Aldehyde dehydrogenase family U876_22680 PF00892 EamA-like transporter family U876_22685 PF12833 Helix-turn-helix domain U876_22690 PF01810 LysE type translocator U876_22695 PF00689 Cation transporting ATPase, C-terminus U876_22695 PF00690 Cation transporter/ATPase, N-terminus U876_22700 PF04143 Sulphur transport U876_22705 PF01810 LysE type translocator U876_22715 PF06206 CpeT/CpcT family (DUF1001) U876_22740 PF14001 YdfZ protein U876_22750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_22750 PF03466 LysR substrate binding domain U876_22765 PF13361 UvrD-like helicase C-terminal domain U876_22765 PF00580 UvrD/REP helicase N-terminal domain U876_22795 PF03466 LysR substrate binding domain U876_22795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_22800 PF00107 Zinc-binding dehydrogenase U876_22800 PF08240 Alcohol dehydrogenase GroES-like domain U876_22805 PF00756 Putative esterase U876_22815 PF03781 Sulfatase-modifying factor enzyme 1 U876_22815 PF12867 DinB superfamily U876_22820 PF13593 SBF-like CPA transporter family (DUF4137) U876_22825 PF13520 Amino acid permease U876_22830 PF01588 Putative tRNA binding domain U876_22835 PF13520 Amino acid permease U876_22840 PF04074 YhcH/YjgK/YiaL U876_22845 PF02929 Beta galactosidase small chain U876_22845 PF02837 Glycosyl hydrolases family 2, sugar binding domain U876_22845 PF02836 Glycosyl hydrolases family 2, TIM barrel domain U876_22845 PF16353 Domain of unknown function(DUF4981) U876_22845 PF00703 Glycosyl hydrolases family 2 U876_22850 PF00356 Bacterial regulatory proteins, lacI family U876_22885 PF00132 Bacterial transferase hexapeptide (six repeats) U876_22890 PF01612 3'-5' exonuclease U876_22890 PF01367 5'-3' exonuclease, C-terminal SAM fold U876_22890 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain U876_22890 PF00476 DNA polymerase family A U876_22900 PF06005 Cell division protein ZapB U876_22910 PF06426 Serine acetyltransferase, N-terminal U876_22910 PF00132 Bacterial transferase hexapeptide (six repeats) U876_22915 PF01545 Cation efflux family U876_22915 PF16916 Dimerisation domain of Zinc Transporter U876_22920 PF00072 Response regulator receiver domain U876_22920 PF00486 Transcriptional regulatory protein, C terminal U876_22925 PF00512 His Kinase A (phospho-acceptor) domain U876_22925 PF16527 Two-component sensor protein CpxA, periplasmic domain U876_22925 PF00672 HAMP domain U876_22925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_22930 PF00588 SpoU rRNA Methylase family U876_22935 PF01554 MatE U876_22940 PF02630 SCO1/SenC U876_22950 PF00717 Peptidase S24-like U876_22950 PF01726 LexA DNA binding domain U876_22955 PF01553 Acyltransferase U876_22960 PF01040 UbiA prenyltransferase family U876_22965 PF04345 Chorismate lyase U876_22970 PF03748 Flagellar basal body-associated protein FliL U876_22990 PF00107 Zinc-binding dehydrogenase U876_22990 PF08240 Alcohol dehydrogenase GroES-like domain U876_22995 PF00356 Bacterial regulatory proteins, lacI family U876_22995 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family U876_23000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 U876_23010 PF03611 PTS system sugar-specific permease component U876_23015 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) U876_23020 PF01075 Glycosyltransferase family 9 (heptosyltransferase) U876_23025 PF00535 Glycosyl transferase family 2 U876_23030 PF01075 Glycosyltransferase family 9 (heptosyltransferase) U876_23035 PF01467 Cytidylyltransferase-like U876_23040 PF04393 Protein of unknown function (DUF535) U876_23045 PF06827 Zinc finger found in FPG and IleRS U876_23045 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain U876_23045 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain U876_23055 PF00471 Ribosomal protein L33 U876_23060 PF00830 Ribosomal L28 family U876_23065 PF04002 RadC-like JAB domain U876_23070 PF02441 Flavoprotein U876_23070 PF04127 DNA / pantothenate metabolism flavoprotein U876_23075 PF00692 dUTPase U876_23080 PF00440 Bacterial regulatory proteins, tetR family U876_23085 PF00924 Mechanosensitive ion channel U876_23085 PF05552 Conserved TM helix U876_23095 PF00342 Phosphoglucose isomerase U876_23100 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain U876_23100 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain U876_23105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family U876_23105 PF03466 LysR substrate binding domain U876_23120 PF00583 Acetyltransferase (GNAT) family U876_23120 PF13380 CoA binding domain U876_23120 PF13607 Succinyl-CoA ligase like flavodoxin domain U876_23145 PF12724 Flavodoxin domain U876_23150 PF02386 Cation transport protein U876_23155 PF09186 Domain of unknown function (DUF1949) U876_23155 PF01205 Uncharacterized protein family UPF0029 U876_23160 PF00557 Metallopeptidase family M24 U876_23165 PF13193 AMP-binding enzyme C-terminal domain U876_23165 PF00501 AMP-binding enzyme U876_23170 PF00378 Enoyl-CoA hydratase/isomerase U876_23170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain U876_23170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain U876_23175 PF02803 Thiolase, C-terminal domain U876_23175 PF00108 Thiolase, N-terminal domain U876_23180 PF00486 Transcriptional regulatory protein, C terminal U876_23180 PF00072 Response regulator receiver domain U876_23185 PF00512 His Kinase A (phospho-acceptor) domain U876_23185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_23185 PF00672 HAMP domain U876_23190 PF01547 Bacterial extracellular solute-binding protein U876_23200 PF01206 Sulfurtransferase TusA U876_23205 PF01042 Endoribonuclease L-PSP U876_23210 PF00691 OmpA family U876_23210 PF13488 Glycine zipper U876_23215 PF00857 Isochorismatase family U876_23220 PF03352 Methyladenine glycosylase U876_23225 PF02091 Glycyl-tRNA synthetase alpha subunit U876_23230 PF02092 Glycyl-tRNA synthetase beta subunit U876_23230 PF05746 DALR anticodon binding domain U876_23245 PF01747 ATP-sulfurylase U876_23245 PF14306 PUA-like domain U876_23265 PF03222 Tryptophan/tyrosine permease family U876_23270 PF12801 4Fe-4S binding domain U876_23280 PF07992 Pyridine nucleotide-disulphide oxidoreductase U876_23280 PF18113 Rubredoxin binding C-terminal domain U876_23285 PF00301 Rubredoxin U876_23285 PF00753 Metallo-beta-lactamase superfamily U876_23285 PF00258 Flavodoxin U876_23290 PF01590 GAF domain U876_23290 PF00158 Sigma-54 interaction domain U876_23295 PF00392 Bacterial regulatory proteins, gntR family U876_23295 PF07702 UTRA domain U876_23300 PF02378 Phosphotransferase system, EIIC U876_23300 PF00367 phosphotransferase system, EIIB U876_23305 PF02056 Family 4 glycosyl hydrolase U876_23305 PF11975 Family 4 glycosyl hydrolase C-terminal domain U876_23310 PF00356 Bacterial regulatory proteins, lacI family U876_23315 PF13458 Periplasmic binding protein U876_23320 PF02653 Branched-chain amino acid transport system / permease component U876_23325 PF11862 Domain of unknown function (DUF3382) U876_23325 PF02653 Branched-chain amino acid transport system / permease component U876_23330 PF00005 ABC transporter U876_23330 PF12399 Branched-chain amino acid ATP-binding cassette transporter U876_23335 PF00005 ABC transporter U876_23350 PF00581 Rhodanese-like domain U876_23355 PF01694 Rhomboid family U876_23355 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease U876_23360 PF12262 Bacterial virulence factor lipase N-terminal U876_23365 PF04380 Membrane fusogenic activity U876_23370 PF00175 Oxidoreductase NAD-binding domain U876_23375 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase U876_23385 PF07497 Rho termination factor, RNA-binding domain U876_23385 PF07498 Rho termination factor, N-terminal domain U876_23385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain U876_23390 PF00085 Thioredoxin U876_23395 PF00271 Helicase conserved C-terminal domain U876_23395 PF00270 DEAD/DEAH box helicase U876_23400 PF02541 Ppx/GppA phosphatase family U876_23415 PF04445 Putative SAM-dependent methyltransferase U876_23420 PF03707 Bacterial signalling protein N terminal repeat U876_23420 PF00990 Diguanylate cyclase, GGDEF domain U876_23420 PF00563 EAL domain U876_23425 PF01432 Peptidase family M3 U876_23430 PF00490 Delta-aminolevulinic acid dehydratase U876_23435 PF01026 TatD related DNase U876_23440 PF00902 Sec-independent protein translocase protein (TatC) U876_23445 PF02416 mttA/Hcf106 family U876_23450 PF02416 mttA/Hcf106 family U876_23455 PF03109 ABC1 family U876_23460 PF02036 SCP-2 sterol transfer family U876_23465 PF01209 ubiE/COQ5 methyltransferase family U876_23470 PF02537 CrcB-like protein, Camphor Resistance (CrcB) U876_23475 PF07969 Amidohydrolase family U876_23515 PF03544 Gram-negative bacterial TonB protein C-terminal U876_23520 PF02472 Biopolymer transport protein ExbD/TolR U876_23525 PF01618 MotA/TolQ/ExbB proton channel family U876_23530 PF01618 MotA/TolQ/ExbB proton channel family U876_23540 PF00196 Bacterial regulatory proteins, luxR family U876_23540 PF03472 Autoinducer binding domain U876_23545 PF13808 DDE_Tnp_1-associated U876_23545 PF01609 Transposase DDE domain U876_23555 PF00665 Integrase core domain U876_23565 PF07715 TonB-dependent Receptor Plug Domain U876_23565 PF00593 TonB dependent receptor U876_23570 PF00005 ABC transporter U876_23575 PF00005 ABC transporter U876_23580 PF06007 Phosphonate metabolism protein PhnJ U876_23585 PF05861 Bacterial phosphonate metabolism protein (PhnI) U876_23650 PF13401 AAA domain U876_23650 PF11426 Tn7 transposition regulator TnsC U876_23655 PF00665 Integrase core domain U876_23660 PF08721 TnsA endonuclease C terminal U876_23660 PF08722 TnsA endonuclease N terminal U876_23750 PF01131 DNA topoisomerase U876_23750 PF01751 Toprim domain U876_23790 PF02195 ParB-like nuclease domain U876_23790 PF06613 KorB C-terminal beta-barrel domain U876_23790 PF08535 KorB domain U876_23795 PF13614 AAA domain U876_23850 PF00004 ATPase family associated with various cellular activities (AAA) U876_23850 PF17862 AAA+ lid domain U876_23850 PF01434 Peptidase family M41 U876_23865 PF00216 Bacterial DNA-binding protein U876_23875 PF00565 Staphylococcal nuclease homologue U876_23930 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin U876_24030 PF06122 Conjugative relaxosome accessory transposon protein U876_24070 PF08774 VRR-NUC domain U876_24070 PF04851 Type III restriction enzyme, res subunit U876_24085 PF01555 DNA methylase U876_24085 PF18273 Type III R-M EcoP15I C-terminal domain U876_24095 PF00005 ABC transporter U876_24120 PF07804 HipA-like C-terminal domain U876_24120 PF13657 HipA N-terminal domain U876_24125 PF01381 Helix-turn-helix U876_24130 PF02899 Phage integrase, N-terminal SAM-like domain U876_24130 PF00589 Phage integrase family U876_24170 PF01527 Transposase U876_24175 PF00665 Integrase core domain U876_24175 PF13276 HTH-like domain U876_24220 PF01609 Transposase DDE domain U876_24220 PF13808 DDE_Tnp_1-associated U876_24230 PF00665 Integrase core domain U876_24240 PF07715 TonB-dependent Receptor Plug Domain U876_24240 PF00593 TonB dependent receptor U876_24245 PF00005 ABC transporter U876_24250 PF00005 ABC transporter U876_24255 PF06007 Phosphonate metabolism protein PhnJ U876_24260 PF05861 Bacterial phosphonate metabolism protein (PhnI) U876_24325 PF13401 AAA domain U876_24325 PF11426 Tn7 transposition regulator TnsC U876_24330 PF00665 Integrase core domain U876_24335 PF08721 TnsA endonuclease C terminal U876_24335 PF08722 TnsA endonuclease N terminal U876_24340 PF01380 SIS domain U876_24345 PF00455 DeoR C terminal sensor domain U876_24345 PF08220 DeoR-like helix-turn-helix domain U876_24350 PF00486 Transcriptional regulatory protein, C terminal U876_24350 PF00072 Response regulator receiver domain U876_24355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase U876_24355 PF00672 HAMP domain U876_24355 PF00512 His Kinase A (phospho-acceptor) domain U876_24360 PF00905 Penicillin binding protein transpeptidase domain U876_24365 PF06123 Inner membrane protein CreD U876_24370 PF14602 Hexapeptide repeat of succinyl-transferase U876_24370 PF00132 Bacterial transferase hexapeptide (six repeats) U876_24370 PF12804 MobA-like NTP transferase domain U876_24375 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain U876_24375 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain U876_24380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain U876_24380 PF02874 ATP synthase alpha/beta family, beta-barrel domain U876_24385 PF00231 ATP synthase U876_24390 PF00306 ATP synthase alpha/beta chain, C terminal domain U876_24390 PF02874 ATP synthase alpha/beta family, beta-barrel domain U876_24390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain U876_24395 PF00213 ATP synthase delta (OSCP) subunit U876_24400 PF00430 ATP synthase B/B' CF(0) U876_24405 PF00137 ATP synthase subunit C U876_24410 PF00119 ATP synthase A chain U876_24420 PF02195 ParB-like nuclease domain U876_24420 PF17762 HTH domain found in ParB protein U876_24425 PF13614 AAA domain U876_24430 PF02527 rRNA small subunit methyltransferase G U876_24435 PF01134 Glucose inhibited division protein A U876_24435 PF13932 GidA associated domain U876_24440 PF00258 Flavodoxin U876_24445 PF07715 TonB-dependent Receptor Plug Domain U876_24445 PF00593 TonB dependent receptor U876_24450 PF00005 ABC transporter U876_24455 PF00005 ABC transporter U876_24465 PF01032 FecCD transport family U876_24470 PF10396 GTP-binding protein TrmE N-terminus U876_24470 PF12631 MnmE helical domain U876_24470 PF01926 50S ribosome-binding GTPase U876_24475 PF14849 YidC periplasmic domain U876_24475 PF02096 60Kd inner membrane protein U876_24480 PF00825 Ribonuclease P U876_24485 PF00468 Ribosomal protein L34 U876_24495 PF00528 Binding-protein-dependent transport system inner membrane component U876_24500 PF00497 Bacterial extracellular solute-binding proteins, family 3