U876_00005 SM00382 ATPases associated with a variety of cellular activities U876_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain U876_00010 SM00480 DNA polymerase III beta subunit U876_00020 SM00387 Histidine kinase-like ATPases U876_00020 SM00433 TopoisomeraseII U876_00055 SM00342 helix_turn_helix, arabinose operon control protein U876_00065 SM00448 cheY-homologous receiver domain U876_00065 SM00862 Transcriptional regulatory protein, C terminal U876_00070 SM00387 Histidine kinase-like ATPases U876_00070 SM00388 His Kinase A (phosphoacceptor) domain U876_00100 SM00091 PAS domain U876_00100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_00100 SM00387 Histidine kinase-like ATPases U876_00140 SM00458 Ricin-type beta-trefoil U876_00160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_00160 SM00387 Histidine kinase-like ATPases U876_00160 SM00388 His Kinase A (phosphoacceptor) domain U876_00165 SM00448 cheY-homologous receiver domain U876_00195 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U876_00195 SM00954 Region found in RelA / SpoT proteins U876_00200 SM01409 U876_00200 U876_00205 SM00072 Guanylate kinase homologues. U876_00220 SM00267 diguanylate cyclase U876_00265 SM00267 diguanylate cyclase U876_00315 SM00421 helix_turn_helix, Lux Regulon U876_00315 SM00448 cheY-homologous receiver domain U876_00320 SM00062 Bacterial periplasmic substrate-binding proteins U876_00320 SM00387 Histidine kinase-like ATPases U876_00320 SM00388 His Kinase A (phosphoacceptor) domain U876_00320 SM00448 cheY-homologous receiver domain U876_00330 SM00387 Histidine kinase-like ATPases U876_00335 SM00448 cheY-homologous receiver domain U876_00335 SM00850 LytTr DNA-binding domain U876_00350 SM01001 AIR carboxylase U876_00380 SM00360 RNA recognition motif U876_00430 SM00052 Putative diguanylate phosphodiesterase U876_00430 SM00267 diguanylate cyclase U876_00440 SM00829 Enoylreductase U876_00515 SM00422 helix_turn_helix, mercury resistance U876_00520 SM00267 diguanylate cyclase U876_00550 SM00382 ATPases associated with a variety of cellular activities U876_00555 SM00062 Bacterial periplasmic substrate-binding proteins U876_00580 SM00563 Phosphate acyltransferases U876_00585 SM00563 Phosphate acyltransferases U876_00590 SM00382 ATPases associated with a variety of cellular activities U876_00630 SM00487 DEAD-like helicases superfamily U876_00630 SM00490 helicase superfamily c-terminal domain U876_00645 SM00919 Malic enzyme, NAD binding domain U876_00645 SM01274 U876_00645 U876_00655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_00655 SM00387 Histidine kinase-like ATPases U876_00655 SM00388 His Kinase A (phosphoacceptor) domain U876_00660 SM00448 cheY-homologous receiver domain U876_00660 SM00862 Transcriptional regulatory protein, C terminal U876_00680 SM00642 Alpha-amylase domain U876_00725 SM01230 U876_00725 U876_00745 SM00382 ATPases associated with a variety of cellular activities U876_00780 SM00341 Helicase and RNase D C-terminal U876_00780 SM00487 DEAD-like helicases superfamily U876_00780 SM00490 helicase superfamily c-terminal domain U876_00780 SM00956 U876_00780 U876_00810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_00810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_00810 SM01358 U876_00810 U876_00815 SM00924 MgtE intracellular N domain U876_00855 SM00382 ATPases associated with a variety of cellular activities U876_00855 SM01086 C-terminal, D2-small domain, of ClpB protein U876_00870 SM00836 DALR anticodon binding domain U876_00870 SM01016 Arginyl tRNA synthetase N terminal dom U876_00875 SM00464 Found in ATP-dependent protease La (LON) U876_00920 SM00354 helix_turn _helix lactose operon repressor U876_00925 SM01038 Beta galactosidase small chain U876_00935 SM00382 ATPases associated with a variety of cellular activities U876_00945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_00945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_01015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_01015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_01035 SM01002 Alanine dehydrogenase/PNT, C-terminal domain U876_01035 SM01003 Alanine dehydrogenase/PNT, N-terminal domain U876_01075 SM00363 S4 RNA-binding domain U876_01085 SM00382 ATPases associated with a variety of cellular activities U876_01085 SM01086 C-terminal, D2-small domain, of ClpB protein U876_01090 SM00849 Metallo-beta-lactamase superfamily U876_01100 SM00344 helix_turn_helix ASNC type U876_01105 SM00062 Bacterial periplasmic substrate-binding proteins U876_01115 SM00116 Domain in cystathionine beta-synthase and other proteins. U876_01135 SM00387 Histidine kinase-like ATPases U876_01135 SM00388 His Kinase A (phosphoacceptor) domain U876_01145 SM00382 ATPases associated with a variety of cellular activities U876_01145 SM00448 cheY-homologous receiver domain U876_01180 SM00448 cheY-homologous receiver domain U876_01180 SM00862 Transcriptional regulatory protein, C terminal U876_01185 SM00387 Histidine kinase-like ATPases U876_01205 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain U876_01205 SM00437 Bacterial DNA topoisomerase I DNA-binding domain U876_01205 SM00493 U876_01205 U876_01220 SM00342 helix_turn_helix, arabinose operon control protein U876_01275 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. U876_01275 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. U876_01280 SM00649 Ribosomal protein L11/L12 U876_01305 SM00663 RNA polymerase I subunit A N-terminus U876_01310 SM01126 U876_01310 U876_01350 SM00838 Elongation factor G C-terminus U876_01350 SM00889 Elongation factor G, domain IV U876_01400 SM01120 U876_01400 U876_01415 SM00091 PAS domain U876_01430 SM00822 U876_01430 U876_01440 SM00014 Acid phosphatase homologues U876_01465 SM01060 U876_01465 U876_01475 SM00342 helix_turn_helix, arabinose operon control protein U876_01475 SM00871 Bacterial transcription activator, effector binding domain U876_01490 SM00267 diguanylate cyclase U876_01500 SM00382 ATPases associated with a variety of cellular activities U876_01525 SM00345 helix_turn_helix gluconate operon transcriptional repressor U876_01525 SM00866 U876_01525 U876_01530 SM00530 Helix-turn-helix XRE-family like proteins U876_01585 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) U876_01585 SM00091 PAS domain U876_01585 SM00267 diguanylate cyclase U876_01605 SM00448 cheY-homologous receiver domain U876_01605 SM00862 Transcriptional regulatory protein, C terminal U876_01610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_01610 SM00387 Histidine kinase-like ATPases U876_01610 SM00388 His Kinase A (phosphoacceptor) domain U876_01615 SM00062 Bacterial periplasmic substrate-binding proteins U876_01615 SM00267 diguanylate cyclase U876_01625 SM00357 Cold shock protein domain U876_01645 SM00062 Bacterial periplasmic substrate-binding proteins U876_01655 SM00421 helix_turn_helix, Lux Regulon U876_01680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_01680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_01715 SM00530 Helix-turn-helix XRE-family like proteins U876_01795 SM00382 ATPases associated with a variety of cellular activities U876_01800 SM00116 Domain in cystathionine beta-synthase and other proteins. U876_01820 SM00382 ATPases associated with a variety of cellular activities U876_01895 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. U876_01900 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. U876_01950 SM00749 bacterial OsmY and nodulation domain U876_02035 SM00842 Cell division protein FtsA U876_02040 SM00864 Tubulin/FtsZ family, GTPase domain U876_02040 SM00865 Tubulin/FtsZ family, C-terminal domain U876_02055 SM00957 SecA DEAD-like domain U876_02055 SM00958 SecA preprotein cross-linking domain U876_02115 SM00644 U876_02115 U876_02120 SM00345 helix_turn_helix gluconate operon transcriptional repressor U876_02120 SM00895 U876_02120 U876_02140 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. U876_02140 SM00267 diguanylate cyclase U876_02150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_02155 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_02155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_02190 SM00833 Cobalamin synthesis protein cobW C-terminal domain U876_02210 SM00905 Dihydroneopterin aldolase U876_02215 SM01207 U876_02215 U876_02260 SM00260 Two component signalling adaptor domain U876_02260 SM00448 cheY-homologous receiver domain U876_02295 SM00851 MGS-like domain U876_02310 SM00870 U876_02310 U876_02325 SM00354 helix_turn _helix lactose operon repressor U876_02335 SM00642 Alpha-amylase domain U876_02340 SM01266 U876_02340 U876_02345 SM00344 helix_turn_helix ASNC type U876_02375 SM00382 ATPases associated with a variety of cellular activities U876_02445 SM01130 U876_02445 U876_02450 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. U876_02450 SM00267 diguanylate cyclase U876_02490 SM00062 Bacterial periplasmic substrate-binding proteins U876_02515 SM00478 endonuclease III U876_02515 SM00525 U876_02515 U876_02525 SM00382 ATPases associated with a variety of cellular activities U876_02535 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U876_02565 SM00345 helix_turn_helix gluconate operon transcriptional repressor U876_02575 SM00450 Rhodanese Homology Domain U876_02600 SM01118 U876_02600 U876_02670 SM00387 Histidine kinase-like ATPases U876_02670 SM00433 TopoisomeraseII U876_02675 SM00434 DNA Topoisomerase IV U876_02710 SM00271 DnaJ molecular chaperone homology domain U876_02740 SM00563 Phosphate acyltransferases U876_02775 SM00986 Uracil DNA glycosylase superfamily U876_02775 SM00987 UreE urease accessory protein, C-terminal domain U876_02795 SM00382 ATPases associated with a variety of cellular activities U876_02835 SM00347 helix_turn_helix multiple antibiotic resistance protein U876_02850 SM00533 DNA-binding domain of DNA mismatch repair MUTS family U876_02850 SM00534 ATPase domain of DNA mismatch repair MUTS family U876_02875 SM00382 ATPases associated with a variety of cellular activities U876_02885 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain U876_02940 SM01091 Transporter associated domain U876_03065 SM01133 U876_03065 U876_03070 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain U876_03085 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. U876_03085 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) U876_03085 SM00091 PAS domain U876_03085 SM00267 diguanylate cyclase U876_03110 SM00382 ATPases associated with a variety of cellular activities U876_03125 SM00411 bacterial (prokaryotic) histone like domain U876_03175 SM00487 DEAD-like helicases superfamily U876_03175 SM00490 helicase superfamily c-terminal domain U876_03190 SM00382 ATPases associated with a variety of cellular activities U876_03210 SM01152 U876_03210 U876_03270 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_03270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_03275 SM00278 Helix-hairpin-helix DNA-binding motif class 1 U876_03280 SM00382 ATPases associated with a variety of cellular activities U876_03350 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_03350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_03365 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain U876_03375 SM00642 Alpha-amylase domain U876_03380 SM00642 Alpha-amylase domain U876_03400 SM00829 Enoylreductase U876_03410 SM00347 helix_turn_helix multiple antibiotic resistance protein U876_03425 SM00344 helix_turn_helix ASNC type U876_03490 SM00345 helix_turn_helix gluconate operon transcriptional repressor U876_03600 SM00382 ATPases associated with a variety of cellular activities U876_03605 SM00116 Domain in cystathionine beta-synthase and other proteins. U876_03615 SM00244 prohibitin homologues U876_03660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_03680 SM00382 ATPases associated with a variety of cellular activities U876_03735 SM00382 ATPases associated with a variety of cellular activities U876_03765 SM00450 Rhodanese Homology Domain U876_03810 SM00487 DEAD-like helicases superfamily U876_03810 SM00490 helicase superfamily c-terminal domain U876_03810 SM00847 Helicase associated domain (HA2) Add an annotation U876_03840 SM00448 cheY-homologous receiver domain U876_03840 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U876_03850 SM00014 Acid phosphatase homologues U876_03945 SM00382 ATPases associated with a variety of cellular activities U876_03955 SM00448 cheY-homologous receiver domain U876_03970 SM00278 Helix-hairpin-helix DNA-binding motif class 1 U876_04005 SM00327 von Willebrand factor (vWF) type A domain U876_04015 SM00260 Two component signalling adaptor domain U876_04015 SM00448 cheY-homologous receiver domain U876_04025 SM00382 ATPases associated with a variety of cellular activities U876_04040 SM00052 Putative diguanylate phosphodiesterase U876_04070 SM00450 Rhodanese Homology Domain U876_04085 SM00382 ATPases associated with a variety of cellular activities U876_04120 SM00052 Putative diguanylate phosphodiesterase U876_04120 SM00091 PAS domain U876_04120 SM00267 diguanylate cyclase U876_04155 SM00479 U876_04155 U876_04185 SM00357 Cold shock protein domain U876_04195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_04195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_04240 SM00495 Chitin-binding domain type 3 U876_04240 SM00636 U876_04240 U876_04245 SM00028 Tetratricopeptide repeats U876_04295 SM00382 ATPases associated with a variety of cellular activities U876_04300 SM00382 ATPases associated with a variety of cellular activities U876_04330 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase U876_04360 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U876_04370 SM01012 U876_04370 U876_04385 SM00382 ATPases associated with a variety of cellular activities U876_04410 SM01057 Eukaryotic-type carbonic anhydrase U876_04420 SM00477 DNA/RNA non-specific endonuclease U876_04420 SM00892 DNA/RNA non-specific endonuclease U876_04445 SM00563 Phosphate acyltransferases U876_04505 SM00825 Beta-ketoacyl synthase U876_04515 SM00822 U876_04515 U876_04520 SM00825 Beta-ketoacyl synthase U876_04530 SM00852 Probable molybdopterin binding domain U876_04555 SM00382 ATPases associated with a variety of cellular activities U876_04595 SM00937 U876_04595 U876_04600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_04600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_04610 SM00870 U876_04610 U876_04620 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain U876_04650 SM01266 U876_04650 U876_04665 SM00829 Enoylreductase U876_04690 SM00878 Biotin carboxylase C-terminal domain U876_04720 SM00052 Putative diguanylate phosphodiesterase U876_04720 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) U876_04720 SM00091 PAS domain U876_04720 SM00267 diguanylate cyclase U876_04790 SM00020 Trypsin-like serine protease U876_04815 SM00382 ATPases associated with a variety of cellular activities U876_04835 SM00861 Transketolase, pyrimidine binding domain U876_04870 SM01103 U876_04870 U876_04880 SM00382 ATPases associated with a variety of cellular activities U876_04920 SM00316 Ribosomal protein S1-like RNA-binding domain U876_04940 SM01387 U876_04940 U876_04945 SM00316 Ribosomal protein S1-like RNA-binding domain U876_04945 SM00322 K homology RNA-binding domain U876_04955 SM00267 diguanylate cyclase U876_04985 SM00448 cheY-homologous receiver domain U876_04985 SM00850 LytTr DNA-binding domain U876_04995 SM00421 helix_turn_helix, Lux Regulon U876_04995 SM00448 cheY-homologous receiver domain U876_05000 SM00387 Histidine kinase-like ATPases U876_05000 SM00388 His Kinase A (phosphoacceptor) domain U876_05015 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U876_05095 SM00422 helix_turn_helix, mercury resistance U876_05125 SM00729 Elongator protein 3, MiaB family, Radical SAM U876_05145 SM00936 Penicillin-binding protein 5, C-terminal domain U876_05215 SM00116 Domain in cystathionine beta-synthase and other proteins. U876_05215 SM01091 Transporter associated domain U876_05230 SM00729 Elongator protein 3, MiaB family, Radical SAM U876_05245 SM00357 Cold shock protein domain U876_05250 SM00267 diguanylate cyclase U876_05275 SM00267 diguanylate cyclase U876_05300 SM00841 Elongation factor P, C-terminal U876_05300 SM01185 U876_05300 U876_05310 SM01240 U876_05310 U876_05320 SM00387 Histidine kinase-like ATPases U876_05320 SM00388 His Kinase A (phosphoacceptor) domain U876_05325 SM00448 cheY-homologous receiver domain U876_05325 SM00862 Transcriptional regulatory protein, C terminal U876_05335 SM00822 U876_05335 U876_05340 SM01236 U876_05340 U876_05400 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_05400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_05440 SM00849 Metallo-beta-lactamase superfamily U876_05450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_05450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_05465 SM00842 Cell division protein FtsA U876_05485 SM00965 Secretin and TonB N terminus short domain U876_05550 SM01150 U876_05550 U876_05565 SM00890 Domain of unknown function U876_05585 SM01022 U876_05585 U876_05590 SM00100 Cyclic nucleotide-monophosphate binding domain U876_05665 SM01400 U876_05665 U876_05690 SM00937 U876_05690 U876_05725 SM00986 Uracil DNA glycosylase superfamily U876_05725 SM00987 UreE urease accessory protein, C-terminal domain U876_05750 SM00460 Transglutaminase/protease-like homologues U876_05775 SM00732 Likely ribonuclease with RNase H fold. U876_05785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_05805 SM00731 SprT homologues. U876_05815 SM00861 Transketolase, pyrimidine binding domain U876_05875 SM00363 S4 RNA-binding domain U876_05885 SM00342 helix_turn_helix, arabinose operon control protein U876_05895 SM00788 Adenylosuccinate synthetase U876_05940 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain U876_05940 SM00437 Bacterial DNA topoisomerase I DNA-binding domain U876_05940 SM00493 U876_05940 U876_05955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_05980 SM00382 ATPases associated with a variety of cellular activities U876_05985 SM00382 ATPases associated with a variety of cellular activities U876_06005 SM00091 PAS domain U876_06005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_06005 SM00387 Histidine kinase-like ATPases U876_06005 SM00388 His Kinase A (phosphoacceptor) domain U876_06005 SM00448 cheY-homologous receiver domain U876_06055 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) U876_06055 SM00091 PAS domain U876_06055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_06065 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U876_06075 SM00852 Probable molybdopterin binding domain U876_06085 SM00382 ATPases associated with a variety of cellular activities U876_06100 SM00382 ATPases associated with a variety of cellular activities U876_06100 SM00448 cheY-homologous receiver domain U876_06105 SM00387 Histidine kinase-like ATPases U876_06105 SM00388 His Kinase A (phosphoacceptor) domain U876_06155 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U876_06170 SM00387 Histidine kinase-like ATPases U876_06170 SM00448 cheY-homologous receiver domain U876_06175 SM00919 Malic enzyme, NAD binding domain U876_06175 SM01274 U876_06175 U876_06280 SM00267 diguanylate cyclase U876_06305 SM00382 ATPases associated with a variety of cellular activities U876_06340 SM00382 ATPases associated with a variety of cellular activities U876_06345 SM00382 ATPases associated with a variety of cellular activities U876_06360 SM00448 cheY-homologous receiver domain U876_06360 SM00862 Transcriptional regulatory protein, C terminal U876_06430 SM00382 ATPases associated with a variety of cellular activities U876_06465 SM00062 Bacterial periplasmic substrate-binding proteins U876_06465 SM00387 Histidine kinase-like ATPases U876_06465 SM00388 His Kinase A (phosphoacceptor) domain U876_06465 SM00448 cheY-homologous receiver domain U876_06465 SM00918 Ligated ion channel L-glutamate- and glycine-binding site U876_06525 SM00530 Helix-turn-helix XRE-family like proteins U876_06545 SM00528 Domain in histone-like proteins of HNS family U876_06565 SM00382 ATPases associated with a variety of cellular activities U876_06580 SM01131 U876_06580 U876_06610 SM00271 DnaJ molecular chaperone homology domain U876_06630 SM00640 Glycosyl hydrolases family 32 U876_06635 SM00354 helix_turn _helix lactose operon repressor U876_06655 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor U876_06680 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) U876_06680 SM00091 PAS domain U876_06680 SM00267 diguanylate cyclase U876_06740 SM00028 Tetratricopeptide repeats U876_06740 SM00448 cheY-homologous receiver domain U876_06835 SM00382 ATPases associated with a variety of cellular activities U876_06840 SM00062 Bacterial periplasmic substrate-binding proteins U876_06860 SM00247 Beta/gamma crystallins U876_06915 SM00481 DNA polymerase alpha chain like domain U876_06935 SM00363 S4 RNA-binding domain U876_07045 SM00984 UDP binding domain U876_07110 SM00487 DEAD-like helicases superfamily U876_07110 SM00490 helicase superfamily c-terminal domain U876_07135 SM00861 Transketolase, pyrimidine binding domain U876_07145 SM00357 Cold shock protein domain U876_07180 SM00420 helix_turn_helix, Deoxyribose operon repressor U876_07180 SM01134 U876_07180 U876_07205 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U876_07210 SM00363 S4 RNA-binding domain U876_07240 SM00858 U876_07240 U876_07245 SM00260 Two component signalling adaptor domain U876_07245 SM00448 cheY-homologous receiver domain U876_07250 SM00138 Methyltransferase, chemotaxis proteins U876_07295 SM00047 Lysozyme subfamily 2 U876_07310 SM00116 Domain in cystathionine beta-synthase and other proteins. U876_07310 SM00924 MgtE intracellular N domain U876_07335 SM00382 ATPases associated with a variety of cellular activities U876_07340 SM00091 PAS domain U876_07340 SM00387 Histidine kinase-like ATPases U876_07340 SM00388 His Kinase A (phosphoacceptor) domain U876_07345 SM00382 ATPases associated with a variety of cellular activities U876_07345 SM00448 cheY-homologous receiver domain U876_07415 SM00382 ATPases associated with a variety of cellular activities U876_07430 SM01091 Transporter associated domain U876_07460 SM00382 ATPases associated with a variety of cellular activities U876_07470 SM00062 Bacterial periplasmic substrate-binding proteins U876_07470 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. U876_07475 SM00267 diguanylate cyclase U876_07485 SM00387 Histidine kinase-like ATPases U876_07490 SM00421 helix_turn_helix, Lux Regulon U876_07490 SM00448 cheY-homologous receiver domain U876_07515 SM00098 Alkaline phosphatase homologues U876_07520 SM00098 Alkaline phosphatase homologues U876_07545 SM00491 U876_07545 U876_07670 SM00528 Domain in histone-like proteins of HNS family U876_07710 SM00382 ATPases associated with a variety of cellular activities U876_07730 SM00421 helix_turn_helix, Lux Regulon U876_07730 SM00448 cheY-homologous receiver domain U876_07735 SM00278 Helix-hairpin-helix DNA-binding motif class 1 U876_07735 SM00465 GIY-YIG type nucleases (URI domain) U876_07830 SM00382 ATPases associated with a variety of cellular activities U876_07965 SM00840 U876_07965 U876_07985 SM00267 diguanylate cyclase U876_07990 SM00062 Bacterial periplasmic substrate-binding proteins U876_07995 SM00062 Bacterial periplasmic substrate-binding proteins U876_08025 SM00899 U876_08025 U876_08050 SM00382 ATPases associated with a variety of cellular activities U876_08060 SM00062 Bacterial periplasmic substrate-binding proteins U876_08070 SM00382 ATPases associated with a variety of cellular activities U876_08120 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain U876_08125 SM00851 MGS-like domain U876_08125 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain U876_08130 SM00917 LeuA allosteric (dimerisation) domain U876_08150 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. U876_08165 SM00487 DEAD-like helicases superfamily U876_08165 SM00490 helicase superfamily c-terminal domain U876_08175 SM01351 U876_08175 U876_08190 SM00422 helix_turn_helix, mercury resistance U876_08205 SM00062 Bacterial periplasmic substrate-binding proteins U876_08215 SM00382 ATPases associated with a variety of cellular activities U876_08230 SM00729 Elongator protein 3, MiaB family, Radical SAM U876_08235 SM00382 ATPases associated with a variety of cellular activities U876_08255 SM00052 Putative diguanylate phosphodiesterase U876_08255 SM00267 diguanylate cyclase U876_08265 SM00327 von Willebrand factor (vWF) type A domain U876_08300 SM00342 helix_turn_helix, arabinose operon control protein U876_08305 SM01217 U876_08305 U876_08340 SM00342 helix_turn_helix, arabinose operon control protein U876_08340 SM00871 Bacterial transcription activator, effector binding domain U876_08355 SM00014 Acid phosphatase homologues U876_08365 SM00859 Semialdehyde dehydrogenase, NAD binding domain U876_08445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_08450 SM00267 diguanylate cyclase U876_08525 SM00116 Domain in cystathionine beta-synthase and other proteins. U876_08525 SM01091 Transporter associated domain U876_08550 SM00487 DEAD-like helicases superfamily U876_08550 SM00490 helicase superfamily c-terminal domain U876_08560 SM00479 U876_08560 U876_08565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_08580 SM00478 endonuclease III U876_08580 SM00525 U876_08580 U876_08590 SM00900 U876_08590 U876_08625 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) U876_08625 SM00091 PAS domain U876_08625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_08660 SM00487 DEAD-like helicases superfamily U876_08660 SM00490 helicase superfamily c-terminal domain U876_08680 SM00448 cheY-homologous receiver domain U876_08680 SM00850 LytTr DNA-binding domain U876_08685 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. U876_08690 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U876_08725 SM00382 ATPases associated with a variety of cellular activities U876_08735 SM00382 ATPases associated with a variety of cellular activities U876_08745 SM01005 Alanine racemase, C-terminal domain U876_08880 SM01252 U876_08880 U876_08900 SM00530 Helix-turn-helix XRE-family like proteins U876_09180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_09180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_09420 SM00382 ATPases associated with a variety of cellular activities U876_09555 SM00530 Helix-turn-helix XRE-family like proteins U876_09560 SM00873 B3/4 domain U876_09565 SM01005 Alanine racemase, C-terminal domain U876_09570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_09570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_09575 SM00052 Putative diguanylate phosphodiesterase U876_09575 SM00448 cheY-homologous receiver domain U876_09580 SM00448 cheY-homologous receiver domain U876_09585 SM00138 Methyltransferase, chemotaxis proteins U876_09590 SM00260 Two component signalling adaptor domain U876_09595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_09600 SM00073 Histidine Phosphotransfer domain U876_09600 SM00260 Two component signalling adaptor domain U876_09600 SM00387 Histidine kinase-like ATPases U876_09600 SM01231 U876_09600 U876_09610 SM00448 cheY-homologous receiver domain U876_09660 SM00382 ATPases associated with a variety of cellular activities U876_09665 SM00382 ATPases associated with a variety of cellular activities U876_09770 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U876_09785 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. U876_09785 SM00382 ATPases associated with a variety of cellular activities U876_09795 SM00493 U876_09795 U876_09800 SM00387 Histidine kinase-like ATPases U876_09835 SM00052 Putative diguanylate phosphodiesterase U876_09835 SM00267 diguanylate cyclase U876_09870 SM00823 Phosphopantetheine attachment site U876_09875 SM00822 U876_09875 U876_09880 SM00823 Phosphopantetheine attachment site U876_09900 SM00382 ATPases associated with a variety of cellular activities U876_09945 SM00893 Electron transfer flavoprotein domain U876_09955 SM00893 Electron transfer flavoprotein domain U876_09975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_09975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_09980 SM00729 Elongator protein 3, MiaB family, Radical SAM U876_10015 SM00116 Domain in cystathionine beta-synthase and other proteins. U876_10015 SM01240 U876_10015 U876_10090 SM00342 helix_turn_helix, arabinose operon control protein U876_10100 SM00369 Leucine-rich repeats, typical (most populated) subfamily U876_10115 SM00855 Phosphoglycerate mutase family U876_10140 SM00487 DEAD-like helicases superfamily U876_10140 SM00490 helicase superfamily c-terminal domain U876_10140 SM00982 U876_10140 U876_10140 SM01058 CarD-like/TRCF domain U876_10155 SM00382 ATPases associated with a variety of cellular activities U876_10165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U876_10185 SM00382 ATPases associated with a variety of cellular activities U876_10185 SM00994 ClpX C4-type zinc finger U876_10185 SM01086 C-terminal, D2-small domain, of ClpB protein U876_10190 SM00382 ATPases associated with a variety of cellular activities U876_10190 SM00464 Found in ATP-dependent protease La (LON) U876_10195 SM00411 bacterial (prokaryotic) histone like domain U876_10205 SM00382 ATPases associated with a variety of cellular activities U876_10220 SM00479 U876_10220 U876_10225 SM00100 Cyclic nucleotide-monophosphate binding domain U876_10225 SM00116 Domain in cystathionine beta-synthase and other proteins. U876_10305 SM00062 Bacterial periplasmic substrate-binding proteins U876_10310 SM00422 helix_turn_helix, mercury resistance U876_10320 SM00878 Biotin carboxylase C-terminal domain U876_10320 SM01209 U876_10320 U876_10365 SM00822 U876_10365 U876_10385 SM00885 D5 N terminal like U876_10400 SM00052 Putative diguanylate phosphodiesterase U876_10400 SM00448 cheY-homologous receiver domain U876_10445 SM00857 Resolvase, N terminal domain U876_10495 SM00267 diguanylate cyclase U876_10510 SM00052 Putative diguanylate phosphodiesterase U876_10510 SM00267 diguanylate cyclase U876_10525 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U876_10530 SM00822 U876_10530 U876_10540 SM00518 AP endonuclease family 2 U876_10570 SM00090 RIO-like kinase U876_10580 SM00267 diguanylate cyclase U876_10590 SM00486 DNA polymerase type-B family U876_10670 SM00347 helix_turn_helix multiple antibiotic resistance protein U876_10750 SM00422 helix_turn_helix, mercury resistance U876_10760 SM00052 Putative diguanylate phosphodiesterase U876_10790 SM00028 Tetratricopeptide repeats U876_10795 SM00327 von Willebrand factor (vWF) type A domain U876_10830 SM01322 U876_10830 U876_10860 SM00382 ATPases associated with a variety of cellular activities U876_10930 SM01092 CO dehydrogenase flavoprotein C-terminal domain U876_10935 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain U876_10955 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain U876_10960 SM01092 CO dehydrogenase flavoprotein C-terminal domain U876_10970 SM00237 Domains in Na-Ca exchangers and integrin-beta4 U876_11005 SM00073 Histidine Phosphotransfer domain U876_11005 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) U876_11005 SM00091 PAS domain U876_11005 SM00387 Histidine kinase-like ATPases U876_11005 SM00388 His Kinase A (phosphoacceptor) domain U876_11005 SM00448 cheY-homologous receiver domain U876_11010 SM00091 PAS domain U876_11015 SM00448 cheY-homologous receiver domain U876_11015 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U876_11055 SM00491 U876_11055 U876_11080 SM00341 Helicase and RNase D C-terminal U876_11080 SM00474 3'-5' exonuclease U876_11085 SM00062 Bacterial periplasmic substrate-binding proteins U876_11205 SM00857 Resolvase, N terminal domain U876_11240 SM00382 ATPases associated with a variety of cellular activities U876_11300 SM00530 Helix-turn-helix XRE-family like proteins U876_11385 SM01060 U876_11385 U876_11390 SM00248 ankyrin repeats U876_11455 SM00528 Domain in histone-like proteins of HNS family U876_11610 SM00421 helix_turn_helix, Lux Regulon U876_11615 SM00116 Domain in cystathionine beta-synthase and other proteins. U876_11625 SM00382 ATPases associated with a variety of cellular activities U876_11625 SM00487 DEAD-like helicases superfamily U876_11625 SM00490 helicase superfamily c-terminal domain U876_11625 SM00847 Helicase associated domain (HA2) Add an annotation U876_11640 SM00387 Histidine kinase-like ATPases U876_11640 SM00388 His Kinase A (phosphoacceptor) domain U876_11640 SM00448 cheY-homologous receiver domain U876_11645 SM00448 cheY-homologous receiver domain U876_11645 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U876_11650 SM00849 Metallo-beta-lactamase superfamily U876_11655 SM00450 Rhodanese Homology Domain U876_11685 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase U876_11690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_11735 SM00316 Ribosomal protein S1-like RNA-binding domain U876_11740 SM00363 S4 RNA-binding domain U876_11790 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. U876_11795 SM00822 U876_11795 U876_11805 SM00825 Beta-ketoacyl synthase U876_11825 SM00382 ATPases associated with a variety of cellular activities U876_11915 SM00822 U876_11915 U876_11955 SM00382 ATPases associated with a variety of cellular activities U876_11965 SM00981 U876_11965 U876_11995 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. U876_11995 SM00245 tail specific protease U876_12000 SM00945 ProQ/FINO family U876_12055 SM00100 Cyclic nucleotide-monophosphate binding domain U876_12055 SM00419 helix_turn_helix, cAMP Regulatory protein U876_12090 SM00382 ATPases associated with a variety of cellular activities U876_12110 SM00354 helix_turn _helix lactose operon repressor U876_12140 SM00062 Bacterial periplasmic substrate-binding proteins U876_12140 SM00387 Histidine kinase-like ATPases U876_12140 SM00388 His Kinase A (phosphoacceptor) domain U876_12140 SM00448 cheY-homologous receiver domain U876_12145 SM00411 bacterial (prokaryotic) histone like domain U876_12150 SM00873 B3/4 domain U876_12150 SM00874 tRNA synthetase B5 domain U876_12150 SM00896 Ferredoxin-fold anticodon binding domain U876_12175 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain U876_12180 SM00671 Sel1-like repeats. U876_12195 SM00434 DNA Topoisomerase IV U876_12225 SM00925 MltA specific insert domain U876_12265 SM00354 helix_turn _helix lactose operon repressor U876_12290 SM00354 helix_turn _helix lactose operon repressor U876_12305 SM00953 U876_12305 U876_12310 SM00487 DEAD-like helicases superfamily U876_12310 SM00490 helicase superfamily c-terminal domain U876_12315 SM00062 Bacterial periplasmic substrate-binding proteins U876_12330 SM00463 Small MutS-related domain U876_12340 SM00091 PAS domain U876_12340 SM00267 diguanylate cyclase U876_12345 SM00855 Phosphoglycerate mutase family U876_12360 SM00495 Chitin-binding domain type 3 U876_12375 SM00782 PhnA Zinc-Ribbon U876_12500 SM00642 Alpha-amylase domain U876_12515 SM00342 helix_turn_helix, arabinose operon control protein U876_12540 SM01144 U876_12540 U876_12555 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. U876_12565 SM00487 DEAD-like helicases superfamily U876_12565 SM00490 helicase superfamily c-terminal domain U876_12590 SM01118 U876_12590 U876_12670 SM00382 ATPases associated with a variety of cellular activities U876_12680 SM00382 ATPases associated with a variety of cellular activities U876_12685 SM00387 Histidine kinase-like ATPases U876_12685 SM00388 His Kinase A (phosphoacceptor) domain U876_12685 SM00448 cheY-homologous receiver domain U876_12745 SM00487 DEAD-like helicases superfamily U876_12745 SM00490 helicase superfamily c-terminal domain U876_12750 SM00763 PrkA AAA domain U876_12765 SM00345 helix_turn_helix gluconate operon transcriptional repressor U876_12790 SM00487 DEAD-like helicases superfamily U876_12790 SM00490 helicase superfamily c-terminal domain U876_12805 SM00062 Bacterial periplasmic substrate-binding proteins U876_12825 SM00448 cheY-homologous receiver domain U876_12830 SM00091 PAS domain U876_12830 SM00387 Histidine kinase-like ATPases U876_12840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_12840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_12840 SM01049 U876_12840 U876_12945 SM00116 Domain in cystathionine beta-synthase and other proteins. U876_12975 SM00342 helix_turn_helix, arabinose operon control protein U876_12975 SM00871 Bacterial transcription activator, effector binding domain U876_12980 SM00822 U876_12980 U876_13010 SM00859 Semialdehyde dehydrogenase, NAD binding domain U876_13050 SM00345 helix_turn_helix gluconate operon transcriptional repressor U876_13050 SM00866 U876_13050 U876_13060 SM00382 ATPases associated with a variety of cellular activities U876_13085 SM00881 CoA binding domain U876_13100 SM00861 Transketolase, pyrimidine binding domain U876_13140 SM00825 Beta-ketoacyl synthase U876_13205 SM00342 helix_turn_helix, arabinose operon control protein U876_13215 SM00382 ATPases associated with a variety of cellular activities U876_13230 SM01007 Class II Aldolase and Adducin N-terminal domain U876_13295 SM00267 diguanylate cyclase U876_13295 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_13305 SM00091 PAS domain U876_13305 SM00382 ATPases associated with a variety of cellular activities U876_13350 SM00382 ATPases associated with a variety of cellular activities U876_13375 SM00382 ATPases associated with a variety of cellular activities U876_13380 SM00382 ATPases associated with a variety of cellular activities U876_13405 SM00382 ATPases associated with a variety of cellular activities U876_13415 SM00843 U876_13415 U876_13420 SM00344 helix_turn_helix ASNC type U876_13430 SM00267 diguanylate cyclase U876_13430 SM00448 cheY-homologous receiver domain U876_13450 SM00316 Ribosomal protein S1-like RNA-binding domain U876_13455 SM00382 ATPases associated with a variety of cellular activities U876_13455 SM01086 C-terminal, D2-small domain, of ClpB protein U876_13465 SM00357 Cold shock protein domain U876_13530 SM00382 ATPases associated with a variety of cellular activities U876_13535 SM00382 ATPases associated with a variety of cellular activities U876_13535 SM01086 C-terminal, D2-small domain, of ClpB protein U876_13630 SM01154 U876_13630 U876_13645 SM00528 Domain in histone-like proteins of HNS family U876_13670 SM01144 U876_13670 U876_13680 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family U876_13685 SM00028 Tetratricopeptide repeats U876_13695 SM00411 bacterial (prokaryotic) histone like domain U876_13700 SM00316 Ribosomal protein S1-like RNA-binding domain U876_13745 SM00052 Putative diguanylate phosphodiesterase U876_13745 SM00267 diguanylate cyclase U876_13760 SM00448 cheY-homologous receiver domain U876_13765 SM00091 PAS domain U876_13790 SM00360 RNA recognition motif U876_13855 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region U876_13860 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U876_13860 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region U876_13900 SM01126 U876_13900 U876_13905 SM01211 U876_13905 U876_13910 SM00062 Bacterial periplasmic substrate-binding proteins U876_13925 SM00564 beta-propeller repeat U876_13945 SM00530 Helix-turn-helix XRE-family like proteins U876_13950 SM00028 Tetratricopeptide repeats U876_13960 SM00562 U876_13960 U876_13985 SM00271 DnaJ molecular chaperone homology domain U876_14035 SM00028 Tetratricopeptide repeats U876_14040 SM00450 Rhodanese Homology Domain U876_14055 SM01323 U876_14055 U876_14070 SM00116 Domain in cystathionine beta-synthase and other proteins. U876_14110 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor U876_14170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_14170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_14230 SM00858 U876_14230 U876_14305 SM00981 U876_14305 U876_14320 SM01359 U876_14320 U876_14320 SM01360 U876_14320 U876_14355 SM00450 Rhodanese Homology Domain U876_14360 SM00052 Putative diguanylate phosphodiesterase U876_14360 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) U876_14360 SM00091 PAS domain U876_14360 SM00267 diguanylate cyclase U876_14385 SM00062 Bacterial periplasmic substrate-binding proteins U876_14385 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. U876_14390 SM00382 ATPases associated with a variety of cellular activities U876_14465 SM00382 ATPases associated with a variety of cellular activities U876_14540 SM00830 Chorismate mutase type II U876_14560 SM00420 helix_turn_helix, Deoxyribose operon repressor U876_14560 SM01134 U876_14560 U876_14625 SM00345 helix_turn_helix gluconate operon transcriptional repressor U876_14655 SM00871 Bacterial transcription activator, effector binding domain U876_14680 SM00363 S4 RNA-binding domain U876_14690 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase U876_14710 SM00487 DEAD-like helicases superfamily U876_14710 SM00490 helicase superfamily c-terminal domain U876_14715 SM00855 Phosphoglycerate mutase family U876_14740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_14740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_14765 SM00563 Phosphate acyltransferases U876_14775 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain U876_14785 SM00867 YceI-like domain U876_14805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_14805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_14815 SM00852 Probable molybdopterin binding domain U876_14830 SM00382 ATPases associated with a variety of cellular activities U876_14860 SM00852 Probable molybdopterin binding domain U876_14885 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U876_14905 SM00729 Elongator protein 3, MiaB family, Radical SAM U876_14910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_14910 SM00387 Histidine kinase-like ATPases U876_14915 SM00421 helix_turn_helix, Lux Regulon U876_14915 SM00448 cheY-homologous receiver domain U876_14920 SM00464 Found in ATP-dependent protease La (LON) U876_14925 SM00387 Histidine kinase-like ATPases U876_14925 SM00388 His Kinase A (phosphoacceptor) domain U876_14925 SM00448 cheY-homologous receiver domain U876_14930 SM00897 FIST N domain U876_14930 SM01204 U876_14930 U876_14940 SM00073 Histidine Phosphotransfer domain U876_14970 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U876_14980 SM00479 U876_14980 U876_14995 SM00849 Metallo-beta-lactamase superfamily U876_15000 SM00257 Lysin motif U876_15025 SM00354 helix_turn _helix lactose operon repressor U876_15035 SM00052 Putative diguanylate phosphodiesterase U876_15035 SM00267 diguanylate cyclase U876_15110 SM00382 ATPases associated with a variety of cellular activities U876_15125 SM00347 helix_turn_helix multiple antibiotic resistance protein U876_15180 SM01081 Putative carbohydrate binding domain U876_15265 SM00458 Ricin-type beta-trefoil U876_15340 SM00342 helix_turn_helix, arabinose operon control protein U876_15350 SM00890 Domain of unknown function U876_15365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_15390 SM00729 Elongator protein 3, MiaB family, Radical SAM U876_15390 SM00876 Biotin and Thiamin Synthesis associated domain U876_15400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_15465 SM01091 Transporter associated domain U876_15490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_15490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_15560 SM00382 ATPases associated with a variety of cellular activities U876_15580 SM00858 U876_15580 U876_15610 SM00859 Semialdehyde dehydrogenase, NAD binding domain U876_15695 SM00959 Rho termination factor, N-terminal domain U876_15850 SM00487 DEAD-like helicases superfamily U876_15905 SM01329 U876_15905 U876_15910 SM00342 helix_turn_helix, arabinose operon control protein U876_15950 SM00354 helix_turn _helix lactose operon repressor U876_16030 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. U876_16130 SM00382 ATPases associated with a variety of cellular activities U876_16140 SM00260 Two component signalling adaptor domain U876_16145 SM00260 Two component signalling adaptor domain U876_16165 SM00448 cheY-homologous receiver domain U876_16170 SM00073 Histidine Phosphotransfer domain U876_16170 SM00260 Two component signalling adaptor domain U876_16170 SM00387 Histidine kinase-like ATPases U876_16170 SM01231 U876_16170 U876_16180 SM00448 cheY-homologous receiver domain U876_16195 SM00382 ATPases associated with a variety of cellular activities U876_16195 SM00962 SRP54-type protein, GTPase domain U876_16255 SM00382 ATPases associated with a variety of cellular activities U876_16285 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U876_16290 SM00729 Elongator protein 3, MiaB family, Radical SAM U876_16315 SM00382 ATPases associated with a variety of cellular activities U876_16325 SM00382 ATPases associated with a variety of cellular activities U876_16330 SM00448 cheY-homologous receiver domain U876_16330 SM00862 Transcriptional regulatory protein, C terminal U876_16335 SM00387 Histidine kinase-like ATPases U876_16375 SM00481 DNA polymerase alpha chain like domain U876_16415 SM00877 U876_16415 U876_16420 SM00877 U876_16420 U876_16425 SM00877 U876_16425 U876_16455 SM00877 U876_16455 U876_16535 SM01130 U876_16535 U876_16545 SM00420 helix_turn_helix, Deoxyribose operon repressor U876_16545 SM01134 U876_16545 U876_16565 SM01007 Class II Aldolase and Adducin N-terminal domain U876_16580 SM00382 ATPases associated with a variety of cellular activities U876_16660 SM00155 Phospholipase D. Active site motifs. U876_16680 SM00642 Alpha-amylase domain U876_16725 SM00729 Elongator protein 3, MiaB family, Radical SAM U876_16745 SM00267 diguanylate cyclase U876_16760 SM00530 Helix-turn-helix XRE-family like proteins U876_16785 SM00919 Malic enzyme, NAD binding domain U876_16785 SM01274 U876_16785 U876_16790 SM00342 helix_turn_helix, arabinose operon control protein U876_16805 SM00267 diguanylate cyclase U876_16865 SM00382 ATPases associated with a variety of cellular activities U876_16900 SM00387 Histidine kinase-like ATPases U876_16900 SM00388 His Kinase A (phosphoacceptor) domain U876_16905 SM00448 cheY-homologous receiver domain U876_16905 SM00862 Transcriptional regulatory protein, C terminal U876_16925 SM00382 ATPases associated with a variety of cellular activities U876_16935 SM00342 helix_turn_helix, arabinose operon control protein U876_16945 SM00448 cheY-homologous receiver domain U876_16950 SM00387 Histidine kinase-like ATPases U876_16955 SM00919 Malic enzyme, NAD binding domain U876_16955 SM01274 U876_16955 U876_16970 SM00347 helix_turn_helix multiple antibiotic resistance protein U876_16985 SM00062 Bacterial periplasmic substrate-binding proteins U876_17020 SM00278 Helix-hairpin-helix DNA-binding motif class 1 U876_17020 SM00292 breast cancer carboxy-terminal domain U876_17020 SM00532 Ligase N family U876_17025 SM00771 ZipA, C-terminal domain (FtsZ-binding) U876_17060 SM00062 Bacterial periplasmic substrate-binding proteins U876_17085 SM00642 Alpha-amylase domain U876_17095 SM00421 helix_turn_helix, Lux Regulon U876_17095 SM00448 cheY-homologous receiver domain U876_17120 SM00267 diguanylate cyclase U876_17125 SM00977 TilS substrate C-terminal domain U876_17140 SM00382 ATPases associated with a variety of cellular activities U876_17160 SM00849 Metallo-beta-lactamase superfamily U876_17195 SM00862 Transcriptional regulatory protein, C terminal U876_17205 SM00481 DNA polymerase alpha chain like domain U876_17235 SM00935 Outer membrane protein (OmpH-like) U876_17245 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. U876_17295 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U876_17375 SM00028 Tetratricopeptide repeats U876_17380 SM00267 diguanylate cyclase U876_17390 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs U876_17390 SM00475 5'-3' exonuclease U876_17395 SM01329 U876_17395 U876_17425 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_17425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_17465 SM00900 U876_17465 U876_17570 SM00421 helix_turn_helix, Lux Regulon U876_17655 SM00422 helix_turn_helix, mercury resistance U876_17690 SM00830 Chorismate mutase type II U876_17810 SM00530 Helix-turn-helix XRE-family like proteins U876_17950 SM00530 Helix-turn-helix XRE-family like proteins U876_18020 SM00487 DEAD-like helicases superfamily U876_18020 SM00490 helicase superfamily c-terminal domain U876_18040 SM00487 DEAD-like helicases superfamily U876_18040 SM00490 helicase superfamily c-terminal domain U876_18045 SM00487 DEAD-like helicases superfamily U876_18090 SM00382 ATPases associated with a variety of cellular activities U876_18105 SM00100 Cyclic nucleotide-monophosphate binding domain U876_18105 SM00419 helix_turn_helix, cAMP Regulatory protein U876_18120 SM00382 ATPases associated with a variety of cellular activities U876_18175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_18175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_18205 SM00463 Small MutS-related domain U876_18220 SM00342 helix_turn_helix, arabinose operon control protein U876_18220 SM00478 endonuclease III U876_18220 SM01009 AlkA N-terminal domain U876_18250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_18255 SM00448 cheY-homologous receiver domain U876_18265 SM00073 Histidine Phosphotransfer domain U876_18265 SM00260 Two component signalling adaptor domain U876_18265 SM00387 Histidine kinase-like ATPases U876_18265 SM01231 U876_18265 U876_18270 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_18270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_18275 SM00260 Two component signalling adaptor domain U876_18280 SM00091 PAS domain U876_18280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_18280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_18285 SM00138 Methyltransferase, chemotaxis proteins U876_18295 SM00448 cheY-homologous receiver domain U876_18330 SM00052 Putative diguanylate phosphodiesterase U876_18350 SM01005 Alanine racemase, C-terminal domain U876_18355 SM00382 ATPases associated with a variety of cellular activities U876_18365 SM00978 U876_18365 U876_18370 SM00052 Putative diguanylate phosphodiesterase U876_18395 SM00382 ATPases associated with a variety of cellular activities U876_18395 SM00448 cheY-homologous receiver domain U876_18405 SM00320 WD40 repeats U876_18430 SM00260 Two component signalling adaptor domain U876_18430 SM00448 cheY-homologous receiver domain U876_18440 SM00267 diguanylate cyclase U876_18450 SM00984 UDP binding domain U876_18510 SM00100 Cyclic nucleotide-monophosphate binding domain U876_18510 SM00419 helix_turn_helix, cAMP Regulatory protein U876_18520 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins U876_18520 SM00495 Chitin-binding domain type 3 U876_18530 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins U876_18530 SM00495 Chitin-binding domain type 3 U876_18530 SM00636 U876_18530 U876_18535 SM00387 Histidine kinase-like ATPases U876_18535 SM00388 His Kinase A (phosphoacceptor) domain U876_18535 SM00448 cheY-homologous receiver domain U876_18545 SM00530 Helix-turn-helix XRE-family like proteins U876_18595 SM00382 ATPases associated with a variety of cellular activities U876_18615 SM01133 U876_18615 U876_18775 SM00507 HNH nucleases U876_18805 SM00382 ATPases associated with a variety of cellular activities U876_18815 SM00382 ATPases associated with a variety of cellular activities U876_18945 SM00382 ATPases associated with a variety of cellular activities U876_18960 SM00271 DnaJ molecular chaperone homology domain U876_18990 SM00650 Ribosomal RNA adenine dimethylases U876_19005 SM00530 Helix-turn-helix XRE-family like proteins U876_19015 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U876_19065 SM00244 prohibitin homologues U876_19070 SM00244 prohibitin homologues U876_19090 SM00853 MutL C terminal dimerisation domain U876_19090 SM01340 U876_19090 U876_19100 SM00257 Lysin motif U876_19100 SM00646 U876_19100 U876_19130 SM00382 ATPases associated with a variety of cellular activities U876_19130 SM00930 U876_19130 U876_19145 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. U876_19150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_19150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_19155 SM00052 Putative diguanylate phosphodiesterase U876_19155 SM00448 cheY-homologous receiver domain U876_19160 SM00062 Bacterial periplasmic substrate-binding proteins U876_19160 SM00073 Histidine Phosphotransfer domain U876_19160 SM00091 PAS domain U876_19160 SM00387 Histidine kinase-like ATPases U876_19160 SM00388 His Kinase A (phosphoacceptor) domain U876_19160 SM00448 cheY-homologous receiver domain U876_19170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U876_19175 SM00073 Histidine Phosphotransfer domain U876_19175 SM00091 PAS domain U876_19175 SM00387 Histidine kinase-like ATPases U876_19175 SM00388 His Kinase A (phosphoacceptor) domain U876_19175 SM00448 cheY-homologous receiver domain U876_19220 SM01130 U876_19220 U876_19275 SM00014 Acid phosphatase homologues U876_19285 SM00917 LeuA allosteric (dimerisation) domain U876_19290 SM01329 U876_19290 U876_19325 SM00382 ATPases associated with a variety of cellular activities U876_19330 SM00670 Large family of predicted nucleotide-binding domains U876_19370 SM00487 DEAD-like helicases superfamily U876_19370 SM00490 helicase superfamily c-terminal domain U876_19385 SM00052 Putative diguanylate phosphodiesterase U876_19385 SM00267 diguanylate cyclase U876_19400 SM00883 Chaperonin 10 Kd subunit U876_19480 SM00729 Elongator protein 3, MiaB family, Radical SAM U876_19495 SM00422 helix_turn_helix, mercury resistance U876_19500 SM00798 AICARFT/IMPCHase bienzyme U876_19500 SM00851 MGS-like domain U876_19505 SM01209 U876_19505 U876_19505 SM01210 U876_19505 U876_19520 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins U876_19520 SM00632 U876_19520 U876_19520 SM00642 Alpha-amylase domain U876_19525 SM01126 U876_19525 U876_19540 SM00400 zinc finger U876_19540 SM00493 U876_19540 U876_19540 SM00766 DNA primase DnaG DnaB-binding U876_19605 SM01192 U876_19605 U876_19605 SM01193 U876_19605 U876_19620 SM00954 Region found in RelA / SpoT proteins U876_19630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_19630 SM00387 Histidine kinase-like ATPases U876_19630 SM00388 His Kinase A (phosphoacceptor) domain U876_19630 SM00448 cheY-homologous receiver domain U876_19640 SM00644 U876_19640 U876_19645 SM00420 helix_turn_helix, Deoxyribose operon repressor U876_19645 SM01134 U876_19645 U876_19710 SM00358 Double-stranded RNA binding motif U876_19710 SM00535 Ribonuclease III family U876_19810 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain U876_19835 SM00287 Bacterial SH3 domain homologues U876_19845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_19845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_19895 SM00382 ATPases associated with a variety of cellular activities U876_19900 SM00062 Bacterial periplasmic substrate-binding proteins U876_19905 SM00382 ATPases associated with a variety of cellular activities U876_19915 SM00448 cheY-homologous receiver domain U876_19915 SM00862 Transcriptional regulatory protein, C terminal U876_19920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_19920 SM00387 Histidine kinase-like ATPases U876_19920 SM00388 His Kinase A (phosphoacceptor) domain U876_20005 SM00487 DEAD-like helicases superfamily U876_20005 SM00490 helicase superfamily c-terminal domain U876_20015 SM00849 Metallo-beta-lactamase superfamily U876_20060 SM00347 helix_turn_helix multiple antibiotic resistance protein U876_20070 SM00347 helix_turn_helix multiple antibiotic resistance protein U876_20085 SM00028 Tetratricopeptide repeats U876_20085 SM00267 diguanylate cyclase U876_20090 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) U876_20090 SM00091 PAS domain U876_20090 SM00267 diguanylate cyclase U876_20095 SM00327 von Willebrand factor (vWF) type A domain U876_20100 SM00382 ATPases associated with a variety of cellular activities U876_20145 SM00829 Enoylreductase U876_20215 SM00967 RNA 2'-O ribose methyltransferase substrate binding U876_20220 SM00316 Ribosomal protein S1-like RNA-binding domain U876_20220 SM00357 Cold shock protein domain U876_20220 SM00955 U876_20220 U876_20225 SM00267 diguanylate cyclase U876_20240 SM00938 Nitrogen regulatory protein P-II U876_20325 SM00904 Riboflavin kinase U876_20340 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor U876_20370 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. U876_20380 SM00927 DNA mismatch repair enzyme MutH U876_20410 SM00382 ATPases associated with a variety of cellular activities U876_20410 SM00962 SRP54-type protein, GTPase domain U876_20410 SM00963 SRP54-type protein, helical bundle domain U876_20420 SM01091 Transporter associated domain U876_20435 SM00671 Sel1-like repeats. U876_20455 SM00062 Bacterial periplasmic substrate-binding proteins U876_20455 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. U876_20460 SM00382 ATPases associated with a variety of cellular activities U876_20475 SM00382 ATPases associated with a variety of cellular activities U876_20490 SM00938 Nitrogen regulatory protein P-II U876_20560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_20580 SM00487 DEAD-like helicases superfamily U876_20580 SM00490 helicase superfamily c-terminal domain U876_20660 SM00245 tail specific protease U876_20690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U876_20690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_20690 SM01049 U876_20690 U876_20710 SM00382 ATPases associated with a variety of cellular activities U876_20740 SM01266 U876_20740 U876_20785 SM00859 Semialdehyde dehydrogenase, NAD binding domain U876_20820 SM00342 helix_turn_helix, arabinose operon control protein U876_20855 SM00421 helix_turn_helix, Lux Regulon U876_20910 SM00382 ATPases associated with a variety of cellular activities U876_20925 SM00363 S4 RNA-binding domain U876_20940 SM00345 helix_turn_helix gluconate operon transcriptional repressor U876_20940 SM00895 U876_20940 U876_20975 SM00421 helix_turn_helix, Lux Regulon U876_20990 SM00357 Cold shock protein domain U876_20990 SM00955 U876_20990 U876_21075 SM00487 DEAD-like helicases superfamily U876_21075 SM00490 helicase superfamily c-terminal domain U876_21125 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain U876_21135 SM00862 Transcriptional regulatory protein, C terminal U876_21280 SM00642 Alpha-amylase domain U876_21300 SM00344 helix_turn_helix ASNC type U876_21320 SM00852 Probable molybdopterin binding domain U876_21335 SM00382 ATPases associated with a variety of cellular activities U876_21365 SM00100 Cyclic nucleotide-monophosphate binding domain U876_21400 SM01219 U876_21400 U876_21510 SM00267 diguanylate cyclase U876_21540 SM00876 Biotin and Thiamin Synthesis associated domain U876_21570 SM00999 Aerolysin toxin U876_21585 SM00448 cheY-homologous receiver domain U876_21585 SM00862 Transcriptional regulatory protein, C terminal U876_21590 SM00388 His Kinase A (phosphoacceptor) domain U876_21605 SM01018 B12 binding domain U876_21740 SM00342 helix_turn_helix, arabinose operon control protein U876_21745 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) U876_21745 SM00091 PAS domain U876_21755 SM00331 Sigma factor PP2C-like phosphatases U876_21755 SM00387 Histidine kinase-like ATPases U876_21760 SM00387 Histidine kinase-like ATPases U876_21760 SM00388 His Kinase A (phosphoacceptor) domain U876_21760 SM00448 cheY-homologous receiver domain U876_21765 SM00448 cheY-homologous receiver domain U876_21765 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U876_21825 SM00886 Stress responsive A/B Barrel Domain U876_21835 SM00316 Ribosomal protein S1-like RNA-binding domain U876_21905 SM00382 ATPases associated with a variety of cellular activities U876_21920 SM00965 Secretin and TonB N terminus short domain U876_21950 SM00052 Putative diguanylate phosphodiesterase U876_21950 SM00267 diguanylate cyclase U876_21955 SM00052 Putative diguanylate phosphodiesterase U876_21985 SM00345 helix_turn_helix gluconate operon transcriptional repressor U876_21985 SM00866 U876_21985 U876_21990 SM00947 Carbonic anhydrase U876_22005 SM00382 ATPases associated with a variety of cellular activities U876_22010 SM00382 ATPases associated with a variety of cellular activities U876_22010 SM00962 SRP54-type protein, GTPase domain U876_22010 SM00963 SRP54-type protein, helical bundle domain U876_22040 SM00155 Phospholipase D. Active site motifs. U876_22050 SM00062 Bacterial periplasmic substrate-binding proteins U876_22150 SM00822 U876_22150 U876_22215 SM00662 RNA polymerases D U876_22220 SM00363 S4 RNA-binding domain U876_22220 SM01390 U876_22220 U876_22285 SM01374 U876_22285 U876_22305 SM00322 K homology RNA-binding domain U876_22320 SM01382 U876_22320 U876_22320 SM01383 U876_22320 U876_22340 SM01403 U876_22340 U876_22350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_22350 SM00387 Histidine kinase-like ATPases U876_22350 SM00388 His Kinase A (phosphoacceptor) domain U876_22355 SM00448 cheY-homologous receiver domain U876_22355 SM00862 Transcriptional regulatory protein, C terminal U876_22365 SM00316 Ribosomal protein S1-like RNA-binding domain U876_22365 SM00732 Likely ribonuclease with RNase H fold. U876_22410 SM00450 Rhodanese Homology Domain U876_22430 SM00354 helix_turn _helix lactose operon repressor U876_22455 SM00155 Phospholipase D. Active site motifs. U876_22460 SM00487 DEAD-like helicases superfamily U876_22460 SM00490 helicase superfamily c-terminal domain U876_22495 SM01230 U876_22495 U876_22505 SM00091 PAS domain U876_22505 SM00387 Histidine kinase-like ATPases U876_22505 SM00388 His Kinase A (phosphoacceptor) domain U876_22510 SM00382 ATPases associated with a variety of cellular activities U876_22510 SM00448 cheY-homologous receiver domain U876_22520 SM00729 Elongator protein 3, MiaB family, Radical SAM U876_22570 SM01001 AIR carboxylase U876_22590 SM00257 Lysin motif U876_22645 SM01002 Alanine dehydrogenase/PNT, C-terminal domain U876_22645 SM01003 Alanine dehydrogenase/PNT, N-terminal domain U876_22665 SM00530 Helix-turn-helix XRE-family like proteins U876_22685 SM00342 helix_turn_helix, arabinose operon control protein U876_22695 SM00831 Cation transporter/ATPase, N-terminus U876_22755 SM01321 U876_22755 U876_22775 SM00382 ATPases associated with a variety of cellular activities U876_22800 SM00829 Enoylreductase U876_22845 SM01038 Beta galactosidase small chain U876_22850 SM00354 helix_turn _helix lactose operon repressor U876_22890 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs U876_22890 SM00474 3'-5' exonuclease U876_22890 SM00475 5'-3' exonuclease U876_22890 SM00482 DNA polymerase A domain U876_22910 SM00971 Serine acetyltransferase, N-terminal U876_22920 SM00448 cheY-homologous receiver domain U876_22920 SM00862 Transcriptional regulatory protein, C terminal U876_22925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_22925 SM00387 Histidine kinase-like ATPases U876_22925 SM00388 His Kinase A (phosphoacceptor) domain U876_22955 SM00563 Phosphate acyltransferases U876_22990 SM00829 Enoylreductase U876_22995 SM00354 helix_turn _helix lactose operon repressor U876_23045 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain U876_23045 SM01232 U876_23045 U876_23120 SM00881 CoA binding domain U876_23180 SM00448 cheY-homologous receiver domain U876_23180 SM00862 Transcriptional regulatory protein, C terminal U876_23185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U876_23185 SM00387 Histidine kinase-like ATPases U876_23185 SM00388 His Kinase A (phosphoacceptor) domain U876_23230 SM00836 DALR anticodon binding domain U876_23285 SM00849 Metallo-beta-lactamase superfamily U876_23290 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. U876_23290 SM00382 ATPases associated with a variety of cellular activities U876_23295 SM00345 helix_turn_helix gluconate operon transcriptional repressor U876_23295 SM00866 U876_23295 U876_23310 SM00354 helix_turn _helix lactose operon repressor U876_23330 SM00382 ATPases associated with a variety of cellular activities U876_23335 SM00382 ATPases associated with a variety of cellular activities U876_23340 SM00342 helix_turn_helix, arabinose operon control protein U876_23350 SM00450 Rhodanese Homology Domain U876_23385 SM00357 Cold shock protein domain U876_23385 SM00382 ATPases associated with a variety of cellular activities U876_23385 SM00959 Rho termination factor, N-terminal domain U876_23395 SM00487 DEAD-like helicases superfamily U876_23395 SM00490 helicase superfamily c-terminal domain U876_23420 SM00052 Putative diguanylate phosphodiesterase U876_23420 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) U876_23420 SM00091 PAS domain U876_23420 SM00267 diguanylate cyclase U876_23430 SM01004 Delta-aminolevulinic acid dehydratase U876_23540 SM00421 helix_turn_helix, Lux Regulon U876_23575 SM00382 ATPases associated with a variety of cellular activities U876_23605 SM00382 ATPases associated with a variety of cellular activities U876_23640 SM00530 Helix-turn-helix XRE-family like proteins U876_23650 SM00382 ATPases associated with a variety of cellular activities U876_23750 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain U876_23750 SM00437 Bacterial DNA topoisomerase I DNA-binding domain U876_23750 SM00493 U876_23750 U876_23755 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains U876_23790 SM00470 ParB-like nuclease domain U876_23850 SM00382 ATPases associated with a variety of cellular activities U876_23865 SM00411 bacterial (prokaryotic) histone like domain U876_23875 SM00318 Staphylococcal nuclease homologues U876_23930 SM00966 SpoVT / AbrB like domain U876_24125 SM00530 Helix-turn-helix XRE-family like proteins U876_24190 SM00778 Zinc-binding domain of primase-helicase U876_24250 SM00382 ATPases associated with a variety of cellular activities U876_24280 SM00382 ATPases associated with a variety of cellular activities U876_24315 SM00530 Helix-turn-helix XRE-family like proteins U876_24325 SM00382 ATPases associated with a variety of cellular activities U876_24345 SM00420 helix_turn_helix, Deoxyribose operon repressor U876_24345 SM01134 U876_24345 U876_24350 SM00448 cheY-homologous receiver domain U876_24350 SM00862 Transcriptional regulatory protein, C terminal U876_24355 SM00387 Histidine kinase-like ATPases U876_24355 SM00388 His Kinase A (phosphoacceptor) domain U876_24380 SM00382 ATPases associated with a variety of cellular activities U876_24420 SM00470 ParB-like nuclease domain U876_24435 SM01228 U876_24435 U876_24450 SM00382 ATPases associated with a variety of cellular activities U876_24455 SM00382 ATPases associated with a variety of cellular activities U876_24490 SM00382 ATPases associated with a variety of cellular activities U876_24500 SM00062 Bacterial periplasmic substrate-binding proteins U876_24500 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins.