locus-tag	class	description
AHOnP31_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AHOnP31_00010	COG0592	DNA-directed DNA polymerase activity
AHOnP31_00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AHOnP31_00030	COG2378	regulation of single-species biofilm formation
AHOnP31_00035	COG0071	Belongs to the small heat shock protein (HSP20) family
AHOnP31_00040	COG0071	Belongs to the small heat shock protein (HSP20) family
AHOnP31_00045	COG3977	Valine--pyruvate aminotransferase
AHOnP31_00060	COG2814	Major facilitator Superfamily
AHOnP31_00065	COG0745	RESPONSE REGULATOR receiver
AHOnP31_00070	COG2205	protein histidine kinase activity
AHOnP31_00090	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AHOnP31_00095	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHOnP31_00095	COG4191	Histidine kinase
AHOnP31_00100	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AHOnP31_00105	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHOnP31_00110	COG1309	transcriptional regulator
AHOnP31_00140	COG0561	phosphatase activity
AHOnP31_00145	COG2267	carboxylic ester hydrolase activity
AHOnP31_00150	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AHOnP31_00155	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AHOnP31_00160	COG1758	RNA polymerase activity
AHOnP31_00175	COG0859	PFAM glycosyl transferase family 9
AHOnP31_00180	COG3642	lipopolysaccharide core region biosynthetic process
AHOnP31_00220	COG0589	response to stress
AHOnP31_00225	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AHOnP31_00235	COG1528	Iron-storage protein
AHOnP31_00240	COG2081	HI0933 family
AHOnP31_00245	COG2223	nitrite transmembrane transporter activity
AHOnP31_00265	COG3188	usher protein
AHOnP31_00285	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHOnP31_00285	COG2205	protein histidine kinase activity
AHOnP31_00295	COG3275	phosphorelay sensor kinase activity
AHOnP31_00300	COG3279	Response regulator of the LytR AlgR family
AHOnP31_00305	COG2223	nitrite transmembrane transporter activity
AHOnP31_00310	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AHOnP31_00315	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AHOnP31_00330	COG0583	DNA-binding transcription factor activity
AHOnP31_00335	COG4206	TonB-dependent receptor
AHOnP31_00340	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AHOnP31_00380	COG0402	S-adenosylhomocysteine deaminase activity
AHOnP31_00385	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AHOnP31_00395	COG3165	ubiquinone biosynthetic process from chorismate
AHOnP31_00400	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AHOnP31_00410	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AHOnP31_00415	COG0805	protein transport
AHOnP31_00420	COG0084	hydrolase, TatD family'
AHOnP31_00440	COG0742	ribosomal rna small subunit methyltransferase
AHOnP31_00455	COG0248	Ppx GppA phosphatase
AHOnP31_00460	COG0513	Belongs to the DEAD box helicase family
AHOnP31_00465	COG3118	belongs to the thioredoxin family
AHOnP31_00480	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AHOnP31_00505	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AHOnP31_00545	COG1609	Transcriptional regulator
AHOnP31_00560	COG2188	Transcriptional regulator
AHOnP31_00565	COG3604	Transcriptional regulator
AHOnP31_00570	COG0426	domain, Protein
AHOnP31_00570	COG1773	rubredoxin
AHOnP31_00575	COG0446	pyridine nucleotide-disulphide oxidoreductase
AHOnP31_00585	COG0348	domain, Protein
AHOnP31_00590	COG0814	amino acid
AHOnP31_00605	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AHOnP31_00625	COG0751	glycine-tRNA ligase activity
AHOnP31_00630	COG0752	glycyl-tRNA synthetase alpha subunit
AHOnP31_00635	COG2818	Glycosylase
AHOnP31_00645	COG2885	chlorophyll binding
AHOnP31_00655	COG0251	oxidation-reduction process
AHOnP31_00660	COG0425	Belongs to the sulfur carrier protein TusA family
AHOnP31_00685	COG0183	Belongs to the thiolase family
AHOnP31_00690	COG1024	Enoyl-CoA hydratase
AHOnP31_00690	COG1250	3-hydroxyacyl-CoA dehydrogenase
AHOnP31_00695	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AHOnP31_00700	COG0006	proline dipeptidase activity
AHOnP31_00705	COG1739	Uncharacterized protein family UPF0029
AHOnP31_00710	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AHOnP31_00715	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
AHOnP31_00755	COG0583	DNA-binding transcription factor activity
AHOnP31_00760	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
AHOnP31_00765	COG0166	Belongs to the GPI family
AHOnP31_00775	COG0668	transmembrane transport
AHOnP31_00780	COG1309	transcriptional regulator
AHOnP31_00785	COG0756	dUTP diphosphatase activity
AHOnP31_00790	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AHOnP31_00795	COG2003	Belongs to the UPF0758 family
AHOnP31_00800	COG0227	Belongs to the bacterial ribosomal protein bL28 family
AHOnP31_00805	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AHOnP31_00815	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AHOnP31_00820	COG2990	Protein conserved in bacteria
AHOnP31_00825	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AHOnP31_00830	COG0859	PFAM glycosyl transferase family 9
AHOnP31_00835	COG0463	Glycosyl transferase, family 2
AHOnP31_00840	COG0859	PFAM glycosyl transferase family 9
AHOnP31_00845	COG1519	Transferase
AHOnP31_00865	COG1609	Transcriptional regulator
AHOnP31_00870	COG0604	alcohol dehydrogenase
AHOnP31_00885	COG1580	Controls the rotational direction of flagella during chemotaxis
AHOnP31_00890	COG3161	chorismate lyase activity
AHOnP31_00895	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
AHOnP31_00900	COG2937	Belongs to the GPAT DAPAT family
AHOnP31_00905	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AHOnP31_00920	COG0534	Mate efflux family protein
AHOnP31_00925	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AHOnP31_00930	COG2205	protein histidine kinase activity
AHOnP31_00935	COG0745	RESPONSE REGULATOR receiver
AHOnP31_00945	COG1045	serine acetyltransferase
AHOnP31_00955	COG3074	FtsZ-dependent cytokinesis
AHOnP31_00960	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
AHOnP31_00965	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AHOnP31_00965	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AHOnP31_00970	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AHOnP31_01010	COG1609	Transcriptional regulator
AHOnP31_01015	COG3250	beta-galactosidase activity
AHOnP31_01020	COG2731	YhcH YjgK YiaL family protein
AHOnP31_01025	COG0531	amino acid
AHOnP31_01030	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AHOnP31_01035	COG0531	amino acid
AHOnP31_01040	COG0385	Bile acid
AHOnP31_01045	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AHOnP31_01065	COG0583	DNA-binding transcription factor activity
AHOnP31_01070	COG1079	Belongs to the binding-protein-dependent transport system permease family
AHOnP31_01075	COG4603	Belongs to the binding-protein-dependent transport system permease family
AHOnP31_01080	COG3845	ABC transporter
AHOnP31_01085	COG1744	ABC transporter substrate-binding protein PnrA-like
AHOnP31_01090	COG0210	DNA helicase
AHOnP31_01155	COG1280	lysine exporter protein (LysE YggA)
AHOnP31_01160	COG2391	methyltransferase activity
AHOnP31_01165	COG0840	transmembrane signaling receptor activity
AHOnP31_01175	COG1280	lysine exporter protein (LysE YggA)
AHOnP31_01185	COG2962	Rard protein
AHOnP31_01195	COG1012	belongs to the aldehyde dehydrogenase family
AHOnP31_01200	COG1396	sequence-specific DNA binding
AHOnP31_01205	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AHOnP31_01215	COG0519	Catalyzes the synthesis of GMP from XMP
AHOnP31_01215	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AHOnP31_01220	COG0686	Belongs to the AlaDH PNT family
AHOnP31_01225	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AHOnP31_01245	COG1322	Protein conserved in bacteria
AHOnP31_01250	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AHOnP31_01255	COG0569	domain protein
AHOnP31_01260	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AHOnP31_01260	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AHOnP31_01265	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AHOnP31_01270	COG0242	peptide deformylase activity
AHOnP31_01280	COG0758	DNA mediated transformation
AHOnP31_01285	COG2922	Belongs to the Smg family
AHOnP31_01290	COG0551	DNA topoisomerase type I activity
AHOnP31_01300	COG0009	L-threonylcarbamoyladenylate synthase
AHOnP31_01305	COG0408	coproporphyrinogen oxidase activity
AHOnP31_01310	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AHOnP31_01320	COG0218	Necessary for normal cell division and for the maintenance of normal septation
AHOnP31_01330	COG3078	GTPase activator activity
AHOnP31_01340	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AHOnP31_01345	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AHOnP31_01350	COG2204	response regulator
AHOnP31_01355	COG3852	Histidine kinase
AHOnP31_01365	COG0174	glutamine synthetase
AHOnP31_01370	COG1217	gtp-binding protein TYPA
AHOnP31_01375	COG1295	ribonuclease BN
AHOnP31_01380	COG1295	ribonuclease BN
AHOnP31_01385	COG1490	D-aminoacyl-tRNA deacylase activity
AHOnP31_01395	COG0456	acetyltransferase
AHOnP31_01405	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AHOnP31_01410	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AHOnP31_01415	COG2610	gluconate transmembrane transporter activity
AHOnP31_01420	COG3265	gluconokinase activity
AHOnP31_01425	COG0129	dihydroxy-acid dehydratase activity
AHOnP31_01430	COG0800	Aldolase
AHOnP31_01435	COG1609	Transcriptional regulator
AHOnP31_01445	COG4942	peptidase
AHOnP31_01450	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AHOnP31_01455	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AHOnP31_01460	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
AHOnP31_01465	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AHOnP31_01470	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
AHOnP31_01470	COG0316	Belongs to the HesB IscA family
AHOnP31_01475	COG1040	competence protein
AHOnP31_01480	COG0596	Alpha beta hydrolase
AHOnP31_01500	COG2183	response to ionizing radiation
AHOnP31_01505	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AHOnP31_01525	COG0051	transcription antitermination factor activity, RNA binding
AHOnP31_01530	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AHOnP31_01535	COG0088	Forms part of the polypeptide exit tunnel
AHOnP31_01540	COG0089	rRNA binding
AHOnP31_01545	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AHOnP31_01550	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AHOnP31_01555	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AHOnP31_01560	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AHOnP31_01565	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AHOnP31_01570	COG0255	Belongs to the universal ribosomal protein uL29 family
AHOnP31_01575	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AHOnP31_01580	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AHOnP31_01585	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AHOnP31_01590	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AHOnP31_01595	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AHOnP31_01600	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AHOnP31_01605	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AHOnP31_01610	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AHOnP31_01615	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AHOnP31_01620	COG1841	ribosomal large subunit assembly
AHOnP31_01625	COG0200	Binds to the 23S rRNA
AHOnP31_01630	COG0201	protein transport
AHOnP31_01635	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AHOnP31_01640	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AHOnP31_01645	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AHOnP31_01650	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AHOnP31_01655	COG0202	RNA polymerase activity
AHOnP31_01660	COG0203	ribosomal protein L17
AHOnP31_01710	COG2249	NAD(P)H dehydrogenase (quinone) activity
AHOnP31_01715	COG0583	DNA-binding transcription factor activity
AHOnP31_01720	COG4221	oxidoreductase activity
AHOnP31_01735	COG1770	oligopeptidase
AHOnP31_01755	COG3714	YhhN family
AHOnP31_01780	COG1301	dicarboxylic acid transport
AHOnP31_01790	COG2095	MarC family integral membrane protein
AHOnP31_01800	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AHOnP31_01810	COG0741	lytic transglycosylase activity
AHOnP31_01820	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AHOnP31_01845	COG0742	ribosomal rna small subunit methyltransferase
AHOnP31_01850	COG0552	protein localization to endoplasmic reticulum
AHOnP31_01855	COG2884	Cell division ATP-binding protein ftsE
AHOnP31_01860	COG2177	Part of the ABC transporter FtsEX involved in
AHOnP31_01870	COG0288	reversible hydration of carbon dioxide
AHOnP31_01875	COG2188	Transcriptional regulator
AHOnP31_01880	COG1228	amidohydrolase
AHOnP31_01885	COG0010	Belongs to the arginase family
AHOnP31_01890	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
AHOnP31_01895	COG2986	histidine ammonia-lyase
AHOnP31_01900	COG0387	Pfam Sodium calcium exchanger
AHOnP31_01905	COG2200	EAL domain
AHOnP31_01910	COG2199	diguanylate cyclase activity
AHOnP31_01910	COG2200	EAL domain
AHOnP31_01955	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AHOnP31_01960	COG1459	type II secretion system
AHOnP31_01970	COG2165	general secretion pathway protein
AHOnP31_01980	COG4968	Prepilin-type N-terminal cleavage methylation domain
AHOnP31_02005	COG1077	Cell shape determining protein MreB Mrl
AHOnP31_02010	COG1792	Involved in formation and maintenance of cell shape
AHOnP31_02015	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
AHOnP31_02020	COG0424	maF-like protein
AHOnP31_02025	COG1530	ribonuclease E activity
AHOnP31_02030	COG3164	Protein of unknown function
AHOnP31_02045	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AHOnP31_02050	COG0312	modulator of DNA gyrase
AHOnP31_02070	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHOnP31_02070	COG1263	PTS System
AHOnP31_02075	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
AHOnP31_02090	COG0477	Major facilitator Superfamily
AHOnP31_02100	COG3437	response regulator, receiver
AHOnP31_02105	COG5002	protein histidine kinase activity
AHOnP31_02105	COG2205	protein histidine kinase activity
AHOnP31_02105	COG0784	Response regulator, receiver
AHOnP31_02110	COG2172	sigma factor antagonist activity
AHOnP31_02115	COG1366	Belongs to the anti-sigma-factor antagonist family
AHOnP31_02135	COG3700	Belongs to the class B bacterial acid phosphatase family
AHOnP31_02140	COG2321	neutral zinc metallopeptidase
AHOnP31_02150	COG1639	'signal transduction protein
AHOnP31_02175	COG0189	ligase activity
AHOnP31_02185	COG0642	Histidine kinase
AHOnP31_02190	COG0745	RESPONSE REGULATOR receiver
AHOnP31_02210	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
AHOnP31_02215	COG0352	thiamine-phosphate diphosphorylase activity
AHOnP31_02220	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AHOnP31_02230	COG2022	thiamine diphosphate biosynthetic process
AHOnP31_02235	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
AHOnP31_02240	COG1943	Transposase
AHOnP31_02250	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AHOnP31_02255	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
AHOnP31_02275	COG0814	amino acid
AHOnP31_02280	COG3932	Exopolysaccharide synthesis, ExoD
AHOnP31_02300	COG1733	regulation of RNA biosynthetic process
AHOnP31_02340	COG1494	fructose-1,6-bisphosphatase
AHOnP31_02355	COG2959	enzyme of heme biosynthesis
AHOnP31_02365	COG0181	hydroxymethylbilane synthase activity
AHOnP31_02370	COG3072	Adenylate cyclase
AHOnP31_02375	COG0400	carboxylic ester hydrolase activity
AHOnP31_02380	COG1965	Belongs to the frataxin family
AHOnP31_02390	COG0019	diaminopimelate decarboxylase activity
AHOnP31_02395	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AHOnP31_02410	COG1011	Hydrolase
AHOnP31_02430	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AHOnP31_02435	COG0561	phosphatase activity
AHOnP31_02450	COG1129	ABC transporter
AHOnP31_02450	COG0842	Transport permease protein
AHOnP31_02460	COG1546	Belongs to the CinA family
AHOnP31_02460	COG1058	Belongs to the CinA family
AHOnP31_02465	COG1418	mRNA catabolic process
AHOnP31_02470	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
AHOnP31_02480	COG1522	sequence-specific DNA binding
AHOnP31_02485	COG1368	sulfuric ester hydrolase activity
AHOnP31_02505	COG1285	pathogenesis
AHOnP31_02525	COG4221	oxidoreductase activity
AHOnP31_02545	COG1979	alcohol dehydrogenase
AHOnP31_02555	COG2873	o-acetylhomoserine
AHOnP31_02565	COG4533	DNA binding
AHOnP31_02580	COG5380	lipid catabolic process
AHOnP31_02585	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
AHOnP31_02595	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AHOnP31_02600	COG2949	membrane
AHOnP31_02605	COG3291	Pkd domain containing protein
AHOnP31_02615	COG3539	Fimbrial protein
AHOnP31_02625	COG3188	usher protein
AHOnP31_02630	COG3121	Chaperone
AHOnP31_02635	COG3539	Fimbrial protein
AHOnP31_02650	COG0318	PFAM AMP-dependent synthetase and ligase
AHOnP31_02655	COG1441	menaquinone biosynthetic process
AHOnP31_02660	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
AHOnP31_02665	COG0596	Alpha beta hydrolase
AHOnP31_02670	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
AHOnP31_02675	COG1169	isochorismate synthase
AHOnP31_02680	COG1575	Belongs to the MenA family. Type 1 subfamily
AHOnP31_02705	COG0513	Belongs to the DEAD box helicase family
AHOnP31_02710	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AHOnP31_02715	COG1988	membrane-bound metal-dependent
AHOnP31_02730	COG1671	Belongs to the UPF0178 family
AHOnP31_02755	COG3263	regulation of cellular component size
AHOnP31_02760	COG3722	fumarate hydratase activity
AHOnP31_02765	COG0246	Mannitol dehydrogenase
AHOnP31_02770	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHOnP31_02770	COG2213	PTS system mannitol-specific
AHOnP31_02780	COG1309	transcriptional regulator
AHOnP31_02785	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
AHOnP31_02795	COG3916	Acyl-homoserine-lactone synthase
AHOnP31_02800	COG2771	luxR family
AHOnP31_02815	COG3133	Outer membrane lipoprotein
AHOnP31_02820	COG0456	acetyltransferase
AHOnP31_02840	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
AHOnP31_02845	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AHOnP31_02855	COG3031	protein transport across the cell outer membrane
AHOnP31_02865	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AHOnP31_02870	COG1459	type II secretion system
AHOnP31_02875	COG2165	general secretion pathway protein
AHOnP31_02890	COG2165	general secretion pathway protein
AHOnP31_02895	COG4795	General secretion pathway protein
AHOnP31_02905	COG3156	type II secretion system protein K
AHOnP31_02915	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
AHOnP31_02930	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AHOnP31_02935	COG1011	Hydrolase
AHOnP31_02940	COG0494	nUDIX hydrolase
AHOnP31_02945	COG1218	3'(2'),5'-bisphosphate nucleotidase
AHOnP31_02950	COG0814	amino acid
AHOnP31_02955	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AHOnP31_02960	COG2207	Transcriptional regulator
AHOnP31_02960	COG3708	Transcriptional regulator
AHOnP31_02970	COG0626	cystathionine gamma-synthase activity
AHOnP31_02975	COG0460	homoserine dehydrogenase
AHOnP31_02975	COG0527	aspartate kinase activity
AHOnP31_02990	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
AHOnP31_03000	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AHOnP31_03005	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AHOnP31_03015	COG0137	argininosuccinate synthase activity
AHOnP31_03020	COG0165	Argininosuccinate lyase
AHOnP31_03045	COG0110	maltose O-acetyltransferase activity
AHOnP31_03050	COG3174	membrane
AHOnP31_03055	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
AHOnP31_03065	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
AHOnP31_03070	COG4208	sulfate ABC transporter
AHOnP31_03075	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
AHOnP31_03080	COG0583	DNA-binding transcription factor activity
AHOnP31_03085	COG3397	chitin binding
AHOnP31_03120	COG4946	Tricorn protease homolog
AHOnP31_03120	COG0793	Belongs to the peptidase S41A family
AHOnP31_03140	COG1328	CTP reductase activity
AHOnP31_03145	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AHOnP31_03160	COG1448	Aminotransferase
AHOnP31_03200	COG0513	Belongs to the DEAD box helicase family
AHOnP31_03220	COG0840	transmembrane signaling receptor activity
AHOnP31_03235	COG3112	Uncharacterised protein family (UPF0231)
AHOnP31_03240	COG3835	regulator
AHOnP31_03245	COG2610	gluconate transmembrane transporter activity
AHOnP31_03250	COG1929	Belongs to the glycerate kinase type-1 family
AHOnP31_03265	COG0583	DNA-binding transcription factor activity
AHOnP31_03270	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AHOnP31_03285	COG0347	Belongs to the P(II) protein family
AHOnP31_03290	COG1840	ABC-type Fe3 transport system, periplasmic component
AHOnP31_03300	COG3842	ATPase activity
AHOnP31_03305	COG2837	iron assimilation
AHOnP31_03310	COG1438	arginine binding
AHOnP31_03315	COG1126	abc transporter atp-binding protein
AHOnP31_03320	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHOnP31_03325	COG4215	(ABC) transporter
AHOnP31_03330	COG4160	amino acid transport
AHOnP31_03335	COG0039	L-malate dehydrogenase activity
AHOnP31_03340	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
AHOnP31_03345	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AHOnP31_03345	COG1017	nitric oxide dioxygenase activity
AHOnP31_03355	COG4536	flavin adenine dinucleotide binding
AHOnP31_03360	COG4137	Cytochrome C assembly protein
AHOnP31_03365	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AHOnP31_03370	COG0228	four-way junction DNA binding
AHOnP31_03375	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AHOnP31_03380	COG0336	Belongs to the RNA methyltransferase TrmD family
AHOnP31_03385	COG0335	large ribosomal subunit rRNA binding
AHOnP31_03395	COG3066	DNA modification
AHOnP31_03400	COG1051	belongs to the nudix hydrolase family
AHOnP31_03410	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AHOnP31_03415	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AHOnP31_03420	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AHOnP31_03430	COG0583	DNA-binding transcription factor activity
AHOnP31_03435	COG0640	Transcriptional regulator
AHOnP31_03440	COG0268	Binds directly to 16S ribosomal RNA
AHOnP31_03445	COG0728	peptidoglycan biosynthetic process
AHOnP31_03450	COG0196	riboflavin kinase activity
AHOnP31_03455	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AHOnP31_03460	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AHOnP31_03465	COG1047	Peptidyl-prolyl cis-trans
AHOnP31_03470	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
AHOnP31_03475	COG4970	Tfp pilus assembly protein FimT
AHOnP31_03530	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AHOnP31_03530	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AHOnP31_03545	COG1854	S-ribosylhomocysteine lyase activity
AHOnP31_03550	COG3706	GGDEF domain
AHOnP31_03555	COG0557	exoribonuclease II activity
AHOnP31_03560	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AHOnP31_03570	COG2153	protein acetylation
AHOnP31_03585	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AHOnP31_03590	COG1914	H( )-stimulated, divalent metal cation uptake system
AHOnP31_03595	COG0360	Binds together with S18 to 16S ribosomal RNA
AHOnP31_03600	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AHOnP31_03605	COG0359	binds to the 23S rRNA
AHOnP31_03635	COG1238	metal cluster binding
AHOnP31_03640	COG0612	Peptidase, M16
AHOnP31_03645	COG2918	glutathione biosynthetic process
AHOnP31_03655	COG1022	Amp-dependent synthetase and ligase
AHOnP31_03665	COG0456	acetyltransferase
AHOnP31_03675	COG0714	Associated with various cellular activities
AHOnP31_03685	COG3300	MHYT domain
AHOnP31_03685	COG5001	Diguanylate cyclase
AHOnP31_03720	COG1902	pentaerythritol trinitrate reductase activity
AHOnP31_03735	COG2957	Belongs to the agmatine deiminase family
AHOnP31_03740	COG0154	amidase activity
AHOnP31_03765	COG0513	Belongs to the DEAD box helicase family
AHOnP31_03785	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
AHOnP31_03815	COG2070	2-Nitropropane dioxygenase
AHOnP31_03850	COG2816	NAD+ diphosphatase activity
AHOnP31_03855	COG2205	protein histidine kinase activity
AHOnP31_03860	COG0745	RESPONSE REGULATOR receiver
AHOnP31_03865	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHOnP31_03870	COG1136	(ABC) transporter
AHOnP31_03870	COG0577	efflux transmembrane transporter activity
AHOnP31_03875	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHOnP31_03880	COG1126	abc transporter atp-binding protein
AHOnP31_03885	COG0765	amino acid transport
AHOnP31_03890	COG0765	amino acid transport
AHOnP31_03895	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AHOnP31_03900	COG1505	serine-type exopeptidase activity
AHOnP31_03915	COG1028	Short-chain dehydrogenase reductase Sdr
AHOnP31_03920	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
AHOnP31_03935	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AHOnP31_03940	COG4991	sh3 domain protein
AHOnP31_03955	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
AHOnP31_03960	COG1940	carbohydrate kinase activity
AHOnP31_03965	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AHOnP31_03970	COG0126	phosphoglycerate kinase activity
AHOnP31_03980	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AHOnP31_04020	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
AHOnP31_04030	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AHOnP31_04035	COG1595	DNA-templated transcription, initiation
AHOnP31_04040	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
AHOnP31_04055	COG0481	GTPase activity
AHOnP31_04060	COG0681	Belongs to the peptidase S26 family
AHOnP31_04065	COG0571	ribonuclease III activity
AHOnP31_04075	COG1381	Involved in DNA repair and RecF pathway recombination
AHOnP31_04080	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AHOnP31_04095	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AHOnP31_04100	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHOnP31_04105	COG3716	PTS system mannose fructose sorbose family IID component
AHOnP31_04115	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHOnP31_04120	COG2222	sugar isomerase
AHOnP31_04130	COG1349	DNA-binding transcription factor activity
AHOnP31_04135	COG3023	N-Acetylmuramoyl-L-alanine amidase
AHOnP31_04140	COG4807	Protein conserved in bacteria
AHOnP31_04150	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AHOnP31_04155	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AHOnP31_04160	COG3956	TIGRFAM MazG family protein
AHOnP31_04165	COG0504	CTP synthase activity
AHOnP31_04170	COG0148	phosphopyruvate hydratase activity
AHOnP31_04175	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
AHOnP31_04180	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
AHOnP31_04190	COG0585	pseudouridine synthase activity
AHOnP31_04195	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
AHOnP31_04200	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AHOnP31_04205	COG1238	metal cluster binding
AHOnP31_04220	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AHOnP31_04225	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AHOnP31_04230	COG1610	YqeY-like protein
AHOnP31_04235	COG0358	DNA primase activity
AHOnP31_04240	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AHOnP31_04265	COG0151	Belongs to the GarS family
AHOnP31_04270	COG0138	bifunctional purine biosynthesis protein purh
AHOnP31_04280	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AHOnP31_04285	COG3036	rescue of stalled ribosome
AHOnP31_04290	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AHOnP31_04295	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AHOnP31_04305	COG0673	inositol 2-dehydrogenase activity
AHOnP31_04315	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AHOnP31_04320	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AHOnP31_04335	COG0477	Major facilitator Superfamily
AHOnP31_04345	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AHOnP31_04350	COG1027	Aspartate ammonia-lyase
AHOnP31_04355	COG3030	protein affecting phage T7 exclusion by the F plasmid
AHOnP31_04360	COG0534	Mate efflux family protein
AHOnP31_04365	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AHOnP31_04370	COG0459	protein refolding
AHOnP31_04380	COG3300	MHYT domain
AHOnP31_04380	COG5001	Diguanylate cyclase
AHOnP31_04390	COG0564	pseudouridine synthase activity
AHOnP31_04395	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AHOnP31_04435	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
AHOnP31_04440	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
AHOnP31_04445	COG1178	ABC-type Fe3 transport system permease component
AHOnP31_04465	COG0066	3-isopropylmalate dehydratase activity
AHOnP31_04470	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
AHOnP31_04475	COG0473	3-isopropylmalate dehydrogenase activity
AHOnP31_04480	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AHOnP31_04490	COG0671	phosphoesterase, PA-phosphatase related
AHOnP31_04495	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AHOnP31_04505	COG0028	Belongs to the TPP enzyme family
AHOnP31_04515	COG0857	belongs to the CobB CobQ family
AHOnP31_04515	COG0280	phosphate acetyltransferase
AHOnP31_04520	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AHOnP31_04530	COG3013	Belongs to the UPF0304 family
AHOnP31_04535	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AHOnP31_04540	COG2716	regulation of RNA biosynthetic process
AHOnP31_04550	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
AHOnP31_04555	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AHOnP31_04570	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
AHOnP31_04590	COG2198	Histidine kinase
AHOnP31_04590	COG0784	Response regulator, receiver
AHOnP31_04590	COG5002	protein histidine kinase activity
AHOnP31_04615	COG0840	transmembrane signaling receptor activity
AHOnP31_04630	COG1464	Belongs to the NlpA lipoprotein family
AHOnP31_04635	COG2011	ABC-type metal ion transport system permease component
AHOnP31_04640	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AHOnP31_04665	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AHOnP31_04665	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AHOnP31_04670	COG0802	atpase or kinase
AHOnP31_04680	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AHOnP31_04685	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AHOnP31_04690	COG1923	regulation of RNA biosynthetic process
AHOnP31_04695	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AHOnP31_04700	COG0330	HflC and HflK could
AHOnP31_04705	COG0330	HflC and HflK could
AHOnP31_04710	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
AHOnP31_04715	COG0142	geranyltranstransferase activity
AHOnP31_04720	COG0261	This protein binds to 23S rRNA in the presence of protein L20
AHOnP31_04725	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AHOnP31_04730	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AHOnP31_04735	COG3314	Sporulation integral membrane protein YlbJ
AHOnP31_04740	COG0318	PFAM AMP-dependent synthetase and ligase
AHOnP31_04755	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
AHOnP31_04760	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AHOnP31_04770	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AHOnP31_04775	COG2967	ApaG domain
AHOnP31_04780	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AHOnP31_04785	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AHOnP31_04795	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AHOnP31_04800	COG3178	'Phosphotransferase
AHOnP31_04805	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AHOnP31_04810	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AHOnP31_04815	COG2252	PERMEase
AHOnP31_04825	COG0488	(ABC) transporter
AHOnP31_04840	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AHOnP31_04845	COG0741	lytic transglycosylase activity
AHOnP31_04865	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
AHOnP31_04870	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AHOnP31_04875	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AHOnP31_04900	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AHOnP31_04910	COG3721	Heme iron utilization protein
AHOnP31_04915	COG0748	coenzyme F420 binding
AHOnP31_04935	COG4771	TonB-dependent receptor
AHOnP31_04940	COG2814	Major facilitator Superfamily
AHOnP31_04945	COG3655	Transcriptional regulator
AHOnP31_04955	COG2202	Pas domain
AHOnP31_04955	COG2205	protein histidine kinase activity
AHOnP31_04970	COG3397	chitin binding
AHOnP31_04975	COG2226	methyltransferase
AHOnP31_04985	COG1765	OsmC-like protein
AHOnP31_05000	COG3954	Phosphoribulokinase
AHOnP31_05005	COG2076	Multidrug Resistance protein
AHOnP31_05010	COG2076	Multidrug Resistance protein
AHOnP31_05015	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AHOnP31_05020	COG0726	polysaccharide deacetylase
AHOnP31_05025	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AHOnP31_05025	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AHOnP31_05030	COG0463	Glycosyl transferase, family 2
AHOnP31_05035	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AHOnP31_05045	COG3089	Belongs to the UPF0270 family
AHOnP31_05050	COG2203	Gaf domain
AHOnP31_05050	COG3706	GGDEF domain
AHOnP31_05050	COG4251	negative regulation of phosphorylation
AHOnP31_05050	COG5001	Diguanylate cyclase
AHOnP31_05055	COG0429	hydrolase of the alpha beta-hydrolase fold
AHOnP31_05060	COG0784	Response regulator, receiver
AHOnP31_05060	COG0835	chemotaxis
AHOnP31_05070	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
AHOnP31_05075	COG1047	Peptidyl-prolyl cis-trans
AHOnP31_05090	COG0545	Peptidyl-prolyl cis-trans isomerase
AHOnP31_05095	COG2204	response regulator
AHOnP31_05115	COG0737	Belongs to the 5'-nucleotidase family
AHOnP31_05120	COG2200	EAL domain
AHOnP31_05130	COG0305	Participates in initiation and elongation during chromosome replication
AHOnP31_05135	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AHOnP31_05145	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AHOnP31_05150	COG0826	peptidase U32
AHOnP31_05155	COG2199	diguanylate cyclase activity
AHOnP31_05155	COG2203	Gaf domain
AHOnP31_05155	COG2200	EAL domain
AHOnP31_05170	COG3188	usher protein
AHOnP31_05180	COG2197	response regulator
AHOnP31_05210	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AHOnP31_05215	COG2201	protein-glutamate methylesterase activity
AHOnP31_05220	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
AHOnP31_05230	COG0840	transmembrane signaling receptor activity
AHOnP31_05235	COG0835	chemotaxis
AHOnP31_05245	COG0643	Histidine kinase
AHOnP31_05245	COG2198	Histidine kinase
AHOnP31_05260	COG0840	transmembrane signaling receptor activity
AHOnP31_05265	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AHOnP31_05275	COG1280	lysine exporter protein (LysE YggA)
AHOnP31_05280	COG0826	peptidase U32
AHOnP31_05310	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
AHOnP31_05335	COG0300	oxidoreductase activity
AHOnP31_05345	COG0840	transmembrane signaling receptor activity
AHOnP31_05355	COG0235	Class ii aldolase
AHOnP31_05360	COG1454	alcohol dehydrogenase
AHOnP31_05365	COG4977	sequence-specific DNA binding
AHOnP31_05370	COG1070	Carbohydrate kinase
AHOnP31_05375	COG4806	L-rhamnose isomerase
AHOnP31_05385	COG3254	rhamnose metabolic process
AHOnP31_05410	COG0077	Prephenate dehydratase
AHOnP31_05410	COG1605	Chorismate mutase
AHOnP31_05440	COG3272	Protein of unknown function (DUF1722)
AHOnP31_05445	COG0789	Transcriptional regulator
AHOnP31_05450	COG0415	Belongs to the DNA photolyase family
AHOnP31_05460	COG4221	oxidoreductase activity
AHOnP31_05475	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AHOnP31_05500	COG0783	Belongs to the Dps family
AHOnP31_05505	COG1151	hydroxylamine reductase activity
AHOnP31_05515	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AHOnP31_05520	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AHOnP31_05520	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AHOnP31_05530	COG2771	luxR family
AHOnP31_05545	COG3501	Rhs element vgr protein
AHOnP31_05580	COG0693	protein deglycase activity
AHOnP31_05585	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AHOnP31_05590	COG1666	GTP binding
AHOnP31_05595	COG3248	Nucleoside-binding outer membrane protein
AHOnP31_05600	COG2211	Major facilitator Superfamily
AHOnP31_05610	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AHOnP31_05620	COG2813	Specifically methylates the guanine in position
AHOnP31_05625	COG0271	Belongs to the BolA IbaG family
AHOnP31_05630	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AHOnP31_05635	COG1805	sodium ion transport
AHOnP31_05640	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AHOnP31_05645	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AHOnP31_05650	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AHOnP31_05655	COG2871	sodium ion transport
AHOnP31_05660	COG1477	protein flavinylation
AHOnP31_05675	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AHOnP31_05680	COG0840	transmembrane signaling receptor activity
AHOnP31_05685	COG0583	DNA-binding transcription factor activity
AHOnP31_05695	COG2363	Small membrane protein
AHOnP31_05700	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
AHOnP31_05710	COG0473	3-isopropylmalate dehydrogenase activity
AHOnP31_05715	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AHOnP31_05720	COG1611	Belongs to the LOG family
AHOnP31_05735	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
AHOnP31_05735	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
AHOnP31_05745	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
AHOnP31_05770	COG3098	single-species biofilm formation
AHOnP31_05775	COG0564	pseudouridine synthase activity
AHOnP31_05785	COG4580	involved in the transport of maltose and maltodextrins
AHOnP31_05795	COG1263	PTS System
AHOnP31_05795	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHOnP31_05805	COG2171	N-acyltransferase activity
AHOnP31_05810	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
AHOnP31_05815	COG0024	Methionine aminopeptidase
AHOnP31_05820	COG0052	Belongs to the universal ribosomal protein uS2 family
AHOnP31_05825	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AHOnP31_05830	COG0528	UMP kinase activity
AHOnP31_05835	COG0233	cytoplasmic translational termination
AHOnP31_05840	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AHOnP31_05845	COG0575	Belongs to the CDS family
AHOnP31_05850	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
AHOnP31_05855	COG0750	zinc metalloprotease
AHOnP31_05870	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AHOnP31_05875	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AHOnP31_05880	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AHOnP31_05885	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AHOnP31_05890	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AHOnP31_05900	COG0825	malonyl-CoA metabolic process
AHOnP31_05905	COG3710	Transcriptional regulator
AHOnP31_05910	COG0531	amino acid
AHOnP31_05915	COG1982	Orn Lys Arg decarboxylase major
AHOnP31_05920	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
AHOnP31_05935	COG0814	amino acid
AHOnP31_05940	COG1234	tRNA 3'-trailer cleavage
AHOnP31_05950	COG1073	alpha beta
AHOnP31_05955	COG1073	alpha beta
AHOnP31_05965	COG0531	amino acid
AHOnP31_05975	COG0488	(ABC) transporter
AHOnP31_05985	COG3590	peptidase
AHOnP31_05995	COG3706	GGDEF domain
AHOnP31_06030	COG0366	Alpha amylase catalytic
AHOnP31_06045	COG0463	Glycosyl transferase, family 2
AHOnP31_06060	COG2989	Protein conserved in bacteria
AHOnP31_06065	COG3108	Peptidase M15
AHOnP31_06075	COG2860	membrane
AHOnP31_06085	COG1196	nuclear chromosome segregation
AHOnP31_06090	COG3115	cell septum assembly
AHOnP31_06095	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AHOnP31_06110	COG0602	queuosine metabolic process
AHOnP31_06140	COG1566	PFAM secretion protein HlyD family protein
AHOnP31_06145	COG1846	Transcriptional regulator
AHOnP31_06165	COG0281	malic enzyme
AHOnP31_06170	COG3290	protein histidine kinase activity
AHOnP31_06175	COG4565	transcriptional regulatory protein
AHOnP31_06180	COG0697	spore germination
AHOnP31_06195	COG3284	Transcriptional regulator
AHOnP31_06200	COG1960	acyl-CoA dehydrogenase activity
AHOnP31_06205	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AHOnP31_06210	COG0346	lactoylglutathione lyase activity
AHOnP31_06215	COG0745	RESPONSE REGULATOR receiver
AHOnP31_06220	COG5002	protein histidine kinase activity
AHOnP31_06245	COG3142	Participates in the control of copper homeostasis
AHOnP31_06250	COG0545	Peptidyl-prolyl cis-trans isomerase
AHOnP31_06255	COG1131	(ABC) transporter
AHOnP31_06275	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
AHOnP31_06285	COG0678	peroxiredoxin activity
AHOnP31_06295	COG0019	diaminopimelate decarboxylase activity
AHOnP31_06300	COG1115	amino acid carrier protein
AHOnP31_06305	COG0095	Lipoate-protein ligase
AHOnP31_06310	COG2233	PERMEase
AHOnP31_06325	COG0534	Mate efflux family protein
AHOnP31_06335	COG0281	malic enzyme
AHOnP31_06365	COG0733	neurotransmitter:sodium symporter activity
AHOnP31_06370	COG1752	Esterase of the alpha-beta hydrolase superfamily
AHOnP31_06375	COG2203	Gaf domain
AHOnP31_06375	COG2199	diguanylate cyclase activity
AHOnP31_06380	COG1566	PFAM secretion protein HlyD family protein
AHOnP31_06385	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AHOnP31_06395	COG1032	radical SAM domain protein
AHOnP31_06430	COG0673	inositol 2-dehydrogenase activity
AHOnP31_06440	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
AHOnP31_06445	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AHOnP31_06450	COG0739	heme binding
AHOnP31_06450	COG0741	lytic transglycosylase activity
AHOnP31_06450	COG1196	nuclear chromosome segregation
AHOnP31_06455	COG0366	Alpha amylase catalytic
AHOnP31_06475	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AHOnP31_06485	COG0788	formyltetrahydrofolate deformylase activity
AHOnP31_06490	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AHOnP31_06500	COG3118	belongs to the thioredoxin family
AHOnP31_06505	COG2091	lysine biosynthetic process via aminoadipic acid
AHOnP31_06510	COG0791	NLP P60 protein
AHOnP31_06515	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
AHOnP31_06530	COG1388	LysM domain
AHOnP31_06530	COG1376	ErfK ybiS ycfS ynhG family protein
AHOnP31_06545	COG0747	negative chemotaxis
AHOnP31_06555	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AHOnP31_06560	COG4172	Belongs to the ABC transporter superfamily
AHOnP31_06580	COG1070	Carbohydrate kinase
AHOnP31_06590	COG0738	Major facilitator superfamily
AHOnP31_06595	COG1349	DNA-binding transcription factor activity
AHOnP31_06600	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
AHOnP31_06605	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AHOnP31_06610	COG1737	Transcriptional regulator
AHOnP31_06615	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
AHOnP31_06625	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AHOnP31_06630	COG2731	YhcH YjgK YiaL family protein
AHOnP31_06635	COG4409	exo-alpha-(2->6)-sialidase activity
AHOnP31_06675	COG4869	propanediol catabolic process
AHOnP31_06685	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AHOnP31_06690	COG1882	Formate acetyltransferase
AHOnP31_06695	COG1454	alcohol dehydrogenase
AHOnP31_06695	COG1012	belongs to the aldehyde dehydrogenase family
AHOnP31_06705	COG1012	belongs to the aldehyde dehydrogenase family
AHOnP31_06705	COG1454	alcohol dehydrogenase
AHOnP31_06740	COG0583	DNA-binding transcription factor activity
AHOnP31_06745	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AHOnP31_06750	COG0243	molybdopterin cofactor binding
AHOnP31_06785	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AHOnP31_06795	COG1960	acyl-CoA dehydrogenase activity
AHOnP31_06800	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AHOnP31_06810	COG0469	pyruvate kinase activity
AHOnP31_06815	COG1737	Transcriptional regulator
AHOnP31_06835	COG2274	protein secretion by the type I secretion system
AHOnP31_06845	COG2274	protein secretion by the type I secretion system
AHOnP31_06855	COG2994	toxin metabolic process
AHOnP31_06860	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
AHOnP31_06860	COG3064	Membrane
AHOnP31_06860	COG1073	alpha beta
AHOnP31_06870	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AHOnP31_06885	COG1677	Flagellar hook-basal body complex protein FliE
AHOnP31_06895	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AHOnP31_06950	COG1684	flagellar biosynthetic protein fliR
AHOnP31_06960	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AHOnP31_06985	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
AHOnP31_06990	COG2198	Histidine kinase
AHOnP31_06990	COG0643	Histidine kinase
AHOnP31_06990	COG0784	Response regulator, receiver
AHOnP31_06995	COG2201	protein-glutamate methylesterase activity
AHOnP31_07000	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AHOnP31_07005	COG1360	Flagellar Motor Protein
AHOnP31_07010	COG1192	Involved in chromosome partitioning
AHOnP31_07020	COG0835	chemotaxis
AHOnP31_07035	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AHOnP31_07040	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AHOnP31_07045	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AHOnP31_07050	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
AHOnP31_07055	COG1138	Cytochrome C-type biogenesis protein
AHOnP31_07060	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AHOnP31_07065	COG3088	subunit of a heme lyase
AHOnP31_07065	COG4235	cytochrome complex assembly
AHOnP31_07070	COG4235	cytochrome complex assembly
AHOnP31_07070	COG3088	subunit of a heme lyase
AHOnP31_07085	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
AHOnP31_07090	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AHOnP31_07090	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AHOnP31_07105	COG0259	pyridoxamine-phosphate oxidase activity
AHOnP31_07110	COG0625	glutathione transferase activity
AHOnP31_07120	COG3153	acetyltransferase
AHOnP31_07130	COG2850	peptidyl-arginine hydroxylation
AHOnP31_07135	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AHOnP31_07140	COG2915	High frequency lysogenization protein hflD homolog
AHOnP31_07145	COG0482	sulfurtransferase activity
AHOnP31_07155	COG1187	pseudouridine synthase activity
AHOnP31_07165	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AHOnP31_07165	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AHOnP31_07165	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHOnP31_07175	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AHOnP31_07175	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHOnP31_07175	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AHOnP31_07185	COG0456	acetyltransferase
AHOnP31_07195	COG0789	Transcriptional regulator
AHOnP31_07200	COG1902	pentaerythritol trinitrate reductase activity
AHOnP31_07200	COG0446	pyridine nucleotide-disulphide oxidoreductase
AHOnP31_07205	COG1609	Transcriptional regulator
AHOnP31_07210	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHOnP31_07210	COG1263	PTS System
AHOnP31_07215	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AHOnP31_07230	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AHOnP31_07245	COG1482	cell wall glycoprotein biosynthetic process
AHOnP31_07250	COG2207	Transcriptional regulator
AHOnP31_07255	COG0538	isocitrate dehydrogenase activity
AHOnP31_07265	COG3048	D-serine ammonia-lyase activity
AHOnP31_07275	COG0583	DNA-binding transcription factor activity
AHOnP31_07300	COG0732	type I restriction modification DNA specificity domain
AHOnP31_07320	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
AHOnP31_07325	COG2867	negative regulation of translational initiation
AHOnP31_07330	COG2914	Belongs to the UPF0125 (RnfH) family
AHOnP31_07335	COG0702	epimerase
AHOnP31_07340	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AHOnP31_07345	COG1454	alcohol dehydrogenase
AHOnP31_07385	COG1280	lysine exporter protein (LysE YggA)
AHOnP31_07405	COG3263	regulation of cellular component size
AHOnP31_07415	COG1876	peptidase activity
AHOnP31_07420	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AHOnP31_07425	COG1393	Belongs to the ArsC family
AHOnP31_07430	COG0583	DNA-binding transcription factor activity
AHOnP31_07440	COG3069	C4-dicarboxylate transmembrane transporter activity
AHOnP31_07455	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AHOnP31_07460	COG0017	Asparaginyl-tRNA synthetase
AHOnP31_07480	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
AHOnP31_07485	COG0156	8-amino-7-oxononanoate synthase activity
AHOnP31_07490	COG2226	methyltransferase
AHOnP31_07490	COG1073	alpha beta
AHOnP31_07495	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AHOnP31_07500	COG0501	Belongs to the peptidase M48B family
AHOnP31_07510	COG0633	Ferredoxin
AHOnP31_07510	COG0633	Ferredoxin
AHOnP31_07510	COG3217	Mosc domain protein beta barrel domain protein
AHOnP31_07510	COG3217	Mosc domain protein beta barrel domain protein
AHOnP31_07520	COG0674	pyruvate-flavodoxin oxidoreductase activity
AHOnP31_07520	COG1013	pyruvate-flavodoxin oxidoreductase activity
AHOnP31_07520	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AHOnP31_07520	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
AHOnP31_07540	COG0534	Mate efflux family protein
AHOnP31_07580	COG1309	transcriptional regulator
AHOnP31_07595	COG0791	NLP P60 protein
AHOnP31_07605	COG0583	DNA-binding transcription factor activity
AHOnP31_07610	COG0450	alkyl hydroperoxide reductase
AHOnP31_07630	COG0500	methyltransferase
AHOnP31_07635	COG4106	trans-aconitate 2-methyltransferase activity
AHOnP31_07640	COG1801	Protein of unknown function DUF72
AHOnP31_07650	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AHOnP31_07655	COG0217	transcriptional regulatory protein
AHOnP31_07660	COG2194	sulfuric ester hydrolase activity
AHOnP31_07665	COG1846	Transcriptional regulator
AHOnP31_07665	COG1940	carbohydrate kinase activity
AHOnP31_07670	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AHOnP31_07675	COG0363	glucosamine-6-phosphate deaminase activity
AHOnP31_07680	COG1263	PTS System
AHOnP31_07680	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHOnP31_07680	COG2190	(PTS) system
AHOnP31_07690	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AHOnP31_07695	COG0735	belongs to the Fur family
AHOnP31_07705	COG0716	FMN binding
AHOnP31_07720	COG0596	Alpha beta hydrolase
AHOnP31_07725	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
AHOnP31_07730	COG0033	Phosphoglucomutase
AHOnP31_07740	COG1846	Transcriptional regulator
AHOnP31_07755	COG2951	lytic endotransglycosylase activity
AHOnP31_07760	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AHOnP31_07765	COG4136	ATPase activity
AHOnP31_07775	COG4134	Bacterial extracellular solute-binding protein
AHOnP31_07785	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AHOnP31_07795	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AHOnP31_07800	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AHOnP31_07810	COG0729	surface antigen
AHOnP31_07835	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AHOnP31_07845	COG0741	lytic transglycosylase activity
AHOnP31_07860	COG1607	acyl-coa hydrolase
AHOnP31_07870	COG3021	interspecies interaction between organisms
AHOnP31_07875	COG0741	lytic transglycosylase activity
AHOnP31_07875	COG1388	LysM domain
AHOnP31_07880	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AHOnP31_07885	COG2226	methyltransferase
AHOnP31_07890	COG0328	RNA-DNA hybrid ribonuclease activity
AHOnP31_07905	COG3437	response regulator, receiver
AHOnP31_07905	COG0784	Response regulator, receiver
AHOnP31_07910	COG1960	acyl-CoA dehydrogenase activity
AHOnP31_07915	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
AHOnP31_07920	COG0121	glutamine amidotransferase
AHOnP31_07950	COG2197	response regulator
AHOnP31_07955	COG3850	Histidine kinase
AHOnP31_07960	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AHOnP31_07965	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
AHOnP31_07965	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AHOnP31_07975	COG0243	molybdopterin cofactor binding
AHOnP31_07980	COG0437	4 iron, 4 sulfur cluster binding
AHOnP31_07985	COG0348	domain, Protein
AHOnP31_07995	COG3005	denitrification pathway
AHOnP31_08000	COG0521	Mo-molybdopterin cofactor biosynthetic process
AHOnP31_08005	COG0315	cyclic pyranopterin monophosphate synthase activity
AHOnP31_08010	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
AHOnP31_08015	COG0314	molybdopterin synthase activity
AHOnP31_08030	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
AHOnP31_08035	COG2267	carboxylic ester hydrolase activity
AHOnP31_08040	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AHOnP31_08050	COG0302	gtp cyclohydrolase
AHOnP31_08055	COG0840	transmembrane signaling receptor activity
AHOnP31_08060	COG2759	Belongs to the formate--tetrahydrofolate ligase family
AHOnP31_08070	COG0583	DNA-binding transcription factor activity
AHOnP31_08100	COG2195	Cleaves the N-terminal amino acid of tripeptides
AHOnP31_08110	COG1166	arginine decarboxylase activity
AHOnP31_08130	COG0814	amino acid
AHOnP31_08140	COG3681	Belongs to the UPF0597 family
AHOnP31_08145	COG2964	Protein conserved in bacteria
AHOnP31_08155	COG1403	HNH endonuclease
AHOnP31_08165	COG0346	lactoylglutathione lyase activity
AHOnP31_08180	COG1187	pseudouridine synthase activity
AHOnP31_08190	COG2807	transmembrane transport
AHOnP31_08205	COG2271	Major facilitator Superfamily
AHOnP31_08230	COG2979	Protein of unknown function (DUF533)
AHOnP31_08235	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AHOnP31_08245	COG1294	oxidase, subunit
AHOnP31_08255	COG2814	Major facilitator Superfamily
AHOnP31_08260	COG0656	L-ascorbic acid biosynthetic process
AHOnP31_08285	COG0583	DNA-binding transcription factor activity
AHOnP31_08290	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AHOnP31_08295	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AHOnP31_08300	COG2271	Major facilitator Superfamily
AHOnP31_08305	COG1349	DNA-binding transcription factor activity
AHOnP31_08315	COG0584	glycerophosphoryl diester phosphodiesterase
AHOnP31_08320	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AHOnP31_08325	COG0287	Prephenate dehydrogenase
AHOnP31_08325	COG1605	Chorismate mutase
AHOnP31_08330	COG0583	DNA-binding transcription factor activity
AHOnP31_08335	COG3085	chromosome segregation
AHOnP31_08340	COG4574	serine-type endopeptidase inhibitor activity
AHOnP31_08360	COG1770	oligopeptidase
AHOnP31_08365	COG4771	TonB-dependent receptor
AHOnP31_08370	COG3083	sulfuric ester hydrolase activity
AHOnP31_08375	COG3082	Protein of unknown function (DUF1414)
AHOnP31_08380	COG3081	Nucleoid-associated protein
AHOnP31_08390	COG1175	transmembrane transport
AHOnP31_08395	COG3833	ABC-type maltose transport systems, permease component
AHOnP31_08400	COG3842	ATPase activity
AHOnP31_08405	COG2326	polyphosphate kinase activity
AHOnP31_08420	COG0425	Belongs to the sulfur carrier protein TusA family
AHOnP31_08425	COG4783	chaperone-mediated protein folding
AHOnP31_08435	COG1393	Belongs to the ArsC family
AHOnP31_08450	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
AHOnP31_08455	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AHOnP31_08460	COG2431	L-lysine efflux transmembrane transporter activity
AHOnP31_08470	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHOnP31_08495	COG1216	Glycosyl transferase, family 2
AHOnP31_08515	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
AHOnP31_08560	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AHOnP31_08570	COG0446	pyridine nucleotide-disulphide oxidoreductase
AHOnP31_08575	COG2373	Large extracellular alpha-helical protein
AHOnP31_08580	COG4953	penicillin-binding protein 1C
AHOnP31_08590	COG0301	tRNA thio-modification
AHOnP31_08590	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AHOnP31_08605	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AHOnP31_08650	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AHOnP31_08670	COG0483	inositol monophosphate 1-phosphatase activity
AHOnP31_08680	COG0625	glutathione transferase activity
AHOnP31_08685	COG2814	Major facilitator Superfamily
AHOnP31_08705	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AHOnP31_08710	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AHOnP31_08715	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AHOnP31_08720	COG0509	glycine decarboxylation via glycine cleavage system
AHOnP31_08725	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AHOnP31_08725	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AHOnP31_08755	COG0798	PFAM Bile acid sodium symporter
AHOnP31_08760	COG1393	Belongs to the ArsC family
AHOnP31_08780	COG3634	alkyl hydroperoxide reductase activity
AHOnP31_08790	COG0517	IMP dehydrogenase activity
AHOnP31_08795	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
AHOnP31_08800	COG0343	queuine tRNA-ribosyltransferase activity
AHOnP31_08805	COG1862	Preprotein translocase
AHOnP31_08810	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AHOnP31_08815	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AHOnP31_08830	COG0826	peptidase U32
AHOnP31_08835	COG0826	peptidase U32
AHOnP31_08840	COG3154	lipid carrier protein
AHOnP31_08860	COG1104	cysteine desulfurase activity
AHOnP31_08865	COG0822	iron-sulfur transferase activity
AHOnP31_08875	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AHOnP31_08880	COG0443	Heat shock 70 kDa protein
AHOnP31_08885	COG0633	Ferredoxin
AHOnP31_08895	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AHOnP31_08900	COG0105	UTP biosynthetic process
AHOnP31_08905	COG0820	rRNA (adenine-C2-)-methyltransferase activity
AHOnP31_08915	COG1426	Protein conserved in bacteria
AHOnP31_08920	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
AHOnP31_08925	COG0124	histidyl-tRNA synthetase
AHOnP31_08930	COG2976	Protein conserved in bacteria
AHOnP31_08935	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AHOnP31_08940	COG1160	GTP binding
AHOnP31_08945	COG1645	bacterial-type flagellum-dependent swarming motility
AHOnP31_08950	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
AHOnP31_08955	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AHOnP31_08955	COG0047	phosphoribosylformylglycinamidine synthase activity
AHOnP31_08960	COG2199	diguanylate cyclase activity
AHOnP31_08960	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
AHOnP31_08975	COG1007	ATP synthesis coupled electron transport
AHOnP31_08980	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHOnP31_08990	COG0713	ATP synthesis coupled electron transport
AHOnP31_08995	COG0839	Belongs to the complex I subunit 6 family
AHOnP31_09000	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHOnP31_09005	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
AHOnP31_09010	COG1034	ATP synthesis coupled electron transport
AHOnP31_09025	COG0649	NAD binding
AHOnP31_09025	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHOnP31_09030	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHOnP31_09035	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHOnP31_09040	COG1360	Flagellar Motor Protein
AHOnP31_09045	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AHOnP31_09060	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
AHOnP31_09080	COG0724	RNA recognition motif
AHOnP31_09085	COG4989	oxidoreductase activity
AHOnP31_09110	COG3437	response regulator, receiver
AHOnP31_09115	COG0583	DNA-binding transcription factor activity
AHOnP31_09125	COG3300	MHYT domain
AHOnP31_09125	COG5001	Diguanylate cyclase
AHOnP31_09130	COG0778	Nitroreductase
AHOnP31_09150	COG0583	DNA-binding transcription factor activity
AHOnP31_09160	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AHOnP31_09165	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
AHOnP31_09170	COG0539	negative regulation of cytoplasmic translation
AHOnP31_09175	COG0776	regulation of translation
AHOnP31_09185	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
AHOnP31_09205	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
AHOnP31_09210	COG0602	queuosine metabolic process
AHOnP31_09215	COG3530	Putative quorum-sensing-regulated virulence factor
AHOnP31_09220	COG2096	Adenosyltransferase
AHOnP31_09225	COG2916	Histone family protein nucleoid-structuring protein H-NS
AHOnP31_09230	COG1757	Na H antiporter
AHOnP31_09235	COG1435	thymidine kinase activity
AHOnP31_09265	COG3501	Rhs element vgr protein
AHOnP31_09340	COG3829	transcription factor binding
AHOnP31_09420	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AHOnP31_09425	COG1278	Cold shock
AHOnP31_09430	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
AHOnP31_09435	COG0542	response to heat
AHOnP31_09440	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AHOnP31_09445	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
AHOnP31_09450	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
AHOnP31_09455	COG3134	Outer membrane lipoprotein
AHOnP31_09460	COG3706	GGDEF domain
AHOnP31_09465	COG0492	ferredoxin-NADP+ reductase activity
AHOnP31_09470	COG0686	Belongs to the AlaDH PNT family
AHOnP31_09480	COG0531	amino acid
AHOnP31_09480	COG1674	ftsk spoiiie
AHOnP31_09485	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
AHOnP31_09490	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AHOnP31_09495	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AHOnP31_09500	COG1286	toxin biosynthetic process
AHOnP31_09505	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AHOnP31_09515	COG4172	Belongs to the ABC transporter superfamily
AHOnP31_09525	COG4171	peptide transport system, permease
AHOnP31_09530	COG4168	peptide transport system, permease
AHOnP31_09540	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AHOnP31_09545	COG1842	Phage shock protein A
AHOnP31_09560	COG3106	COG3106 Predicted ATPase
AHOnP31_09565	COG3768	UPF0283 membrane protein
AHOnP31_09575	COG2154	pterin-4-alpha-carbinolamine dehydratase
AHOnP31_09595	COG2199	diguanylate cyclase activity
AHOnP31_09600	COG2885	chlorophyll binding
AHOnP31_09605	COG0861	Integral membrane protein TerC family
AHOnP31_09620	COG1022	Amp-dependent synthetase and ligase
AHOnP31_09625	COG0295	cytidine deaminase activity
AHOnP31_09630	COG1346	cytolysis
AHOnP31_09635	COG1380	Effector of murein hydrolase LrgA
AHOnP31_09640	COG3345	alpha-galactosidase
AHOnP31_09650	COG2925	Exonuclease
AHOnP31_09655	COG2160	L-arabinose isomerase activity
AHOnP31_09665	COG1069	ribulokinase activity
AHOnP31_09670	COG1879	ABC-type sugar transport system periplasmic component
AHOnP31_09680	COG1172	Belongs to the binding-protein-dependent transport system permease family
AHOnP31_09690	COG0583	DNA-binding transcription factor activity
AHOnP31_09700	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AHOnP31_09705	COG0254	rRNA binding
AHOnP31_09720	COG1451	nucleotide metabolic process
AHOnP31_09735	COG3069	C4-dicarboxylate transmembrane transporter activity
AHOnP31_09745	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AHOnP31_09745	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
AHOnP31_09750	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AHOnP31_09775	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
AHOnP31_09780	COG1053	succinate dehydrogenase
AHOnP31_09790	COG0567	Dehydrogenase, E1 component
AHOnP31_09795	COG0508	dehydrogenase complex catalyzes the overall conversion of
AHOnP31_09800	COG0045	succinate-CoA ligase (ADP-forming) activity
AHOnP31_09805	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AHOnP31_09815	COG2983	Belongs to the UPF0260 family
AHOnP31_09820	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AHOnP31_09830	COG3842	ATPase activity
AHOnP31_09835	COG1840	ABC-type Fe3 transport system, periplasmic component
AHOnP31_09845	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AHOnP31_09855	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AHOnP31_09860	COG1882	Formate acetyltransferase
AHOnP31_09865	COG2116	formate transmembrane transporter activity
AHOnP31_09870	COG1944	ATP diphosphatase activity
AHOnP31_09880	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AHOnP31_09885	COG0612	Peptidase, M16
AHOnP31_09900	COG2910	NAD(P)H-binding
AHOnP31_09905	COG0583	DNA-binding transcription factor activity
AHOnP31_09915	COG4977	sequence-specific DNA binding
AHOnP31_09920	COG4774	siderophore transport
AHOnP31_09935	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AHOnP31_09945	COG0516	GMP reductase activity
AHOnP31_09945	COG0517	IMP dehydrogenase activity
AHOnP31_09975	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AHOnP31_09980	COG3046	protein related to deoxyribodipyrimidine photolyase
AHOnP31_09990	COG3033	Beta-eliminating lyase
AHOnP31_10000	COG1051	belongs to the nudix hydrolase family
AHOnP31_10005	COG3088	subunit of a heme lyase
AHOnP31_10005	COG4235	cytochrome complex assembly
AHOnP31_10010	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AHOnP31_10020	COG3301	Polysulphide reductase, NrfD
AHOnP31_10025	COG0437	4 iron, 4 sulfur cluster binding
AHOnP31_10030	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
AHOnP31_10050	COG0247	lactate metabolic process
AHOnP31_10055	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
AHOnP31_10060	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AHOnP31_10065	COG3012	SEC-C Motif Domain Protein
AHOnP31_10070	COG0840	transmembrane signaling receptor activity
AHOnP31_10075	COG1940	carbohydrate kinase activity
AHOnP31_10075	COG1846	Transcriptional regulator
AHOnP31_10080	COG3290	protein histidine kinase activity
AHOnP31_10085	COG4565	transcriptional regulatory protein
AHOnP31_10105	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
AHOnP31_10110	COG0569	domain protein
AHOnP31_10110	COG2985	domain, Protein
AHOnP31_10120	COG0556	nucleotide-excision repair
AHOnP31_10130	COG0586	Pfam SNARE associated Golgi protein
AHOnP31_10135	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
AHOnP31_10140	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AHOnP31_10145	COG2186	Transcriptional regulator
AHOnP31_10150	COG2719	SpoVR family
AHOnP31_10160	COG2766	serine protein kinase
AHOnP31_10165	COG0514	ATP-dependent DNA helicase (RecQ)
AHOnP31_10170	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
AHOnP31_10175	COG0814	amino acid
AHOnP31_10205	COG0058	SHG alpha-glucan phosphorylase activity
AHOnP31_10210	COG0471	metal ion transport
AHOnP31_10215	COG3118	belongs to the thioredoxin family
AHOnP31_10225	COG1132	(ABC) transporter
AHOnP31_10230	COG1132	(ABC) transporter
AHOnP31_10245	COG2501	S4 domain
AHOnP31_10255	COG3243	poly(R)-hydroxyalkanoic acid synthase
AHOnP31_10275	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
AHOnP31_10280	COG2329	Antibiotic biosynthesis monooxygenase
AHOnP31_10310	COG1742	UPF0060 membrane protein
AHOnP31_10320	COG0456	acetyltransferase
AHOnP31_10325	COG0513	Belongs to the DEAD box helicase family
AHOnP31_10330	COG0386	Belongs to the glutathione peroxidase family
AHOnP31_10340	COG1181	Belongs to the D-alanine--D-alanine ligase family
AHOnP31_10350	COG3148	PFAM DTW domain containing protein
AHOnP31_10355	COG0730	response to heat
AHOnP31_10360	COG0583	DNA-binding transcription factor activity
AHOnP31_10375	COG3593	DNA synthesis involved in DNA repair
AHOnP31_10410	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AHOnP31_10415	COG1011	Hydrolase
AHOnP31_10420	COG1473	amidohydrolase
AHOnP31_10425	COG0205	6-phosphofructokinase activity
AHOnP31_10435	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AHOnP31_10440	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AHOnP31_10450	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
AHOnP31_10455	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
AHOnP31_10475	COG0242	peptide deformylase activity
AHOnP31_10505	COG0384	phenazine biosynthesis protein PhzF
AHOnP31_10515	COG2824	Alkylphosphonate utilization operon protein PhnA
AHOnP31_10545	COG3706	GGDEF domain
AHOnP31_10555	COG2840	Smr protein MutS2
AHOnP31_10560	COG2890	protein-(glutamine-N5) methyltransferase activity
AHOnP31_10565	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
AHOnP31_10575	COG0513	Belongs to the DEAD box helicase family
AHOnP31_10580	COG5654	RES domain protein
AHOnP31_10590	COG0814	amino acid
AHOnP31_10595	COG1609	Transcriptional regulator
AHOnP31_10600	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHOnP31_10600	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHOnP31_10605	COG1105	Belongs to the carbohydrate kinase PfkB family
AHOnP31_10610	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AHOnP31_10610	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AHOnP31_10610	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
AHOnP31_10615	COG2140	Oxalate decarboxylase
AHOnP31_10620	COG1609	Transcriptional regulator
AHOnP31_10635	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHOnP31_10635	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHOnP31_10640	COG3715	PTS system
AHOnP31_10645	COG3716	PTS system mannose fructose sorbose family IID component
AHOnP31_10650	COG2942	2-epimerase
AHOnP31_10655	COG3313	Fe-S protein
AHOnP31_10660	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
AHOnP31_10665	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AHOnP31_10670	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AHOnP31_10675	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AHOnP31_10685	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AHOnP31_10710	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AHOnP31_10715	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AHOnP31_10720	COG0291	Belongs to the bacterial ribosomal protein bL35 family
AHOnP31_10725	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AHOnP31_10730	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AHOnP31_10735	COG0072	phenylalanine-tRNA ligase activity
AHOnP31_10735	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AHOnP31_10740	COG0776	regulation of translation
AHOnP31_10745	COG0784	Response regulator, receiver
AHOnP31_10745	COG2205	protein histidine kinase activity
AHOnP31_10770	COG2199	diguanylate cyclase activity
AHOnP31_10775	COG1609	Transcriptional regulator
AHOnP31_10780	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AHOnP31_10785	COG1879	ABC-type sugar transport system periplasmic component
AHOnP31_10790	COG1172	Belongs to the binding-protein-dependent transport system permease family
AHOnP31_10795	COG1129	ABC transporter
AHOnP31_10800	COG1869	D-ribose catabolic process
AHOnP31_10820	COG0037	tRNA processing
AHOnP31_10825	COG0589	response to stress
AHOnP31_10830	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AHOnP31_10855	COG2010	Cytochrome c
AHOnP31_10870	COG3278	Belongs to the heme-copper respiratory oxidase family
AHOnP31_10880	COG1956	GAF domain-containing protein
AHOnP31_10885	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
AHOnP31_10895	COG0308	aminopeptidase N
AHOnP31_10905	COG2902	Dehydrogenase
AHOnP31_10910	COG0167	dihydroorotate dehydrogenase activity
AHOnP31_10925	COG0116	Belongs to the methyltransferase superfamily
AHOnP31_10925	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
AHOnP31_10935	COG0488	(ABC) transporter
AHOnP31_10950	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AHOnP31_10955	COG1067	ATP-dependent peptidase activity
AHOnP31_10965	COG3141	response to X-ray
AHOnP31_10975	COG4221	oxidoreductase activity
AHOnP31_11020	COG0372	Belongs to the citrate synthase family
AHOnP31_11025	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
AHOnP31_11035	COG2995	paraquat-inducible protein a
AHOnP31_11040	COG3008	intermembrane lipid transfer
AHOnP31_11045	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
AHOnP31_11045	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AHOnP31_11060	COG0084	hydrolase, TatD family'
AHOnP31_11065	COG0470	DNA polymerase III
AHOnP31_11070	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AHOnP31_11075	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AHOnP31_11080	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AHOnP31_11085	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AHOnP31_11090	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AHOnP31_11095	COG1028	Short-chain dehydrogenase reductase Sdr
AHOnP31_11105	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AHOnP31_11110	COG0416	fatty acid biosynthetic process
AHOnP31_11115	COG0333	Belongs to the bacterial ribosomal protein bL32 family
AHOnP31_11120	COG1399	metal-binding, possibly nucleic acid-binding protein
AHOnP31_11135	COG2814	Major facilitator Superfamily
AHOnP31_11140	COG0424	maF-like protein
AHOnP31_11145	COG0546	phosphoglycolate phosphatase activity
AHOnP31_11150	COG0564	pseudouridine synthase activity
AHOnP31_11155	COG1530	ribonuclease E activity
AHOnP31_11160	COG0306	phosphate transporter
AHOnP31_11165	COG0717	Belongs to the dCTP deaminase family
AHOnP31_11170	COG0572	uridine kinase
AHOnP31_11175	COG0489	protein tyrosine kinase activity
AHOnP31_11180	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AHOnP31_11180	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AHOnP31_11185	COG0625	glutathione transferase activity
AHOnP31_11190	COG1254	Belongs to the acylphosphatase family
AHOnP31_11195	COG0840	transmembrane signaling receptor activity
AHOnP31_11200	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
AHOnP31_11215	COG0709	Synthesizes selenophosphate from selenide and ATP
AHOnP31_11220	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
AHOnP31_11225	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AHOnP31_11230	COG3437	response regulator, receiver
AHOnP31_11240	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
AHOnP31_11250	COG1643	Atp-dependent helicase
AHOnP31_11255	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
AHOnP31_11255	COG0617	tRNA 3'-terminal CCA addition
AHOnP31_11255	COG0517	IMP dehydrogenase activity
AHOnP31_11410	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AHOnP31_11415	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AHOnP31_11475	COG0753	catalase activity
AHOnP31_11580	COG0582	viral genome integration into host DNA
AHOnP31_11585	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AHOnP31_11595	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AHOnP31_11600	COG2832	Protein of unknown function (DUF454)
AHOnP31_11605	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AHOnP31_11620	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
AHOnP31_11625	COG0318	PFAM AMP-dependent synthetase and ligase
AHOnP31_11630	COG2226	methyltransferase
AHOnP31_11630	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AHOnP31_11630	COG0596	Alpha beta hydrolase
AHOnP31_11640	COG1214	PFAM Peptidase M22, glycoprotease
AHOnP31_11645	COG1199	ATP-dependent helicase activity
AHOnP31_11655	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
AHOnP31_11660	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AHOnP31_11665	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AHOnP31_11670	COG0131	Imidazoleglycerol-phosphate dehydratase
AHOnP31_11670	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AHOnP31_11675	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AHOnP31_11680	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
AHOnP31_11685	COG3437	response regulator, receiver
AHOnP31_11690	COG2199	diguanylate cyclase activity
AHOnP31_11695	COG0784	Response regulator, receiver
AHOnP31_11695	COG2198	Histidine kinase
AHOnP31_11695	COG2205	protein histidine kinase activity
AHOnP31_11700	COG0107	imidazoleglycerol-phosphate synthase activity
AHOnP31_11705	COG0140	phosphoribosyl-ATP diphosphatase activity
AHOnP31_11705	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AHOnP31_11720	COG0318	PFAM AMP-dependent synthetase and ligase
AHOnP31_11735	COG3134	Outer membrane lipoprotein
AHOnP31_11745	COG2080	2 iron, 2 sulfur cluster binding
AHOnP31_11750	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AHOnP31_11755	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AHOnP31_11760	COG2252	PERMEase
AHOnP31_11765	COG0402	S-adenosylhomocysteine deaminase activity
AHOnP31_11770	COG2233	PERMEase
AHOnP31_11775	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AHOnP31_11775	COG2080	2 iron, 2 sulfur cluster binding
AHOnP31_11780	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AHOnP31_11785	COG0402	S-adenosylhomocysteine deaminase activity
AHOnP31_11790	COG0493	'glutamate synthase
AHOnP31_11790	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AHOnP31_11795	COG2068	MobA-Related Protein
AHOnP31_11800	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AHOnP31_11805	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
AHOnP31_11805	COG3608	succinylglutamate desuccinylase aspartoacylase
AHOnP31_11810	COG0697	spore germination
AHOnP31_11815	COG0549	Belongs to the carbamate kinase family
AHOnP31_11825	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AHOnP31_11830	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AHOnP31_11835	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AHOnP31_11840	COG3829	transcription factor binding
AHOnP31_11860	COG1250	3-hydroxyacyl-CoA dehydrogenase
AHOnP31_11860	COG1024	Enoyl-CoA hydratase
AHOnP31_11865	COG0183	Belongs to the thiolase family
AHOnP31_11870	COG0714	Associated with various cellular activities
AHOnP31_11900	COG1595	DNA-templated transcription, initiation
AHOnP31_11915	COG2067	long-chain fatty acid transport protein
AHOnP31_11920	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
AHOnP31_11940	COG3123	guanosine phosphorylase activity
AHOnP31_11945	COG1760	l-serine dehydratase
AHOnP31_11950	COG1760	l-serine dehydratase
AHOnP31_11955	COG2951	lytic endotransglycosylase activity
AHOnP31_11960	COG3100	YcgL domain-containing protein
AHOnP31_11965	COG0850	regulation of cytokinetic process
AHOnP31_11970	COG2894	cell division
AHOnP31_11975	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
AHOnP31_11980	COG3099	Belongs to the UPF0263 family
AHOnP31_11985	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AHOnP31_12025	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AHOnP31_12030	COG0697	spore germination
AHOnP31_12035	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
AHOnP31_12040	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AHOnP31_12050	COG0307	riboflavin synthase, alpha
AHOnP31_12060	COG0534	Mate efflux family protein
AHOnP31_12090	COG0417	DNA replication proofreading
AHOnP31_12115	COG1560	Kdo2-lipid A biosynthetic process
AHOnP31_12120	COG1560	Kdo2-lipid A biosynthetic process
AHOnP31_12130	COG0583	DNA-binding transcription factor activity
AHOnP31_12135	COG0673	inositol 2-dehydrogenase activity
AHOnP31_12140	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
AHOnP31_12145	COG0583	DNA-binding transcription factor activity
AHOnP31_12155	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
AHOnP31_12165	COG3300	MHYT domain
AHOnP31_12165	COG5001	Diguanylate cyclase
AHOnP31_12170	COG2723	6-phospho-beta-galactosidase activity
AHOnP31_12175	COG0583	DNA-binding transcription factor activity
AHOnP31_12180	COG3300	MHYT domain
AHOnP31_12180	COG5001	Diguanylate cyclase
AHOnP31_12225	COG3621	Patatin-like phospholipase
AHOnP31_12245	COG1902	pentaerythritol trinitrate reductase activity
AHOnP31_12250	COG0583	DNA-binding transcription factor activity
AHOnP31_12255	COG1073	alpha beta
AHOnP31_12275	COG2135	peptidase activity
AHOnP31_12280	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AHOnP31_12285	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AHOnP31_12310	COG1598	PFAM Uncharacterised protein family UPF0150
AHOnP31_12365	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AHOnP31_12385	COG0730	response to heat
AHOnP31_12395	COG1028	Short-chain dehydrogenase reductase Sdr
AHOnP31_12405	COG1024	Enoyl-CoA hydratase
AHOnP31_12410	COG1024	Enoyl-CoA hydratase
AHOnP31_12415	COG1960	acyl-CoA dehydrogenase activity
AHOnP31_12425	COG1960	acyl-CoA dehydrogenase activity
AHOnP31_12430	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AHOnP31_12465	COG1584	GPR1 FUN34 yaaH family protein
AHOnP31_12480	COG1115	amino acid carrier protein
AHOnP31_12485	COG1024	Enoyl-CoA hydratase
AHOnP31_12500	COG3162	membrane
AHOnP31_12505	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AHOnP31_12510	COG0488	(ABC) transporter
AHOnP31_12515	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AHOnP31_12520	COG0776	regulation of translation
AHOnP31_12525	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AHOnP31_12530	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AHOnP31_12535	COG0740	serine-type endopeptidase activity
AHOnP31_12540	COG0544	peptidyl-prolyl cis-trans isomerase activity
AHOnP31_12550	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
AHOnP31_12555	COG4591	ABC-type transport system involved in lipoprotein release permease component
AHOnP31_12560	COG1136	(ABC) transporter
AHOnP31_12565	COG4591	ABC-type transport system involved in lipoprotein release permease component
AHOnP31_12575	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AHOnP31_12580	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
AHOnP31_12585	COG4166	transmembrane transport
AHOnP31_12590	COG0697	spore germination
AHOnP31_12600	COG2062	phosphohistidine phosphatase, SixA
AHOnP31_12640	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AHOnP31_12640	COG0519	Catalyzes the synthesis of GMP from XMP
AHOnP31_12645	COG0516	GMP reductase activity
AHOnP31_12645	COG0517	IMP dehydrogenase activity
AHOnP31_12650	COG3158	transport of potassium into the cell
AHOnP31_12670	COG0697	spore germination
AHOnP31_12675	COG1570	exodeoxyribonuclease VII activity
AHOnP31_12690	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AHOnP31_12695	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AHOnP31_12700	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
AHOnP31_12740	COG4771	TonB-dependent receptor
AHOnP31_12745	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AHOnP31_12750	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AHOnP31_12755	COG1120	ATPase activity
AHOnP31_12765	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AHOnP31_12770	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AHOnP31_12780	COG1028	Short-chain dehydrogenase reductase Sdr
AHOnP31_12785	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AHOnP31_12790	COG1535	isochorismatase
AHOnP31_12790	COG3433	isochorismatase activity
AHOnP31_12795	COG1021	2,3-dihydroxybenzoate-AMP ligase
AHOnP31_12815	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AHOnP31_12820	COG3300	MHYT domain
AHOnP31_12820	COG5001	Diguanylate cyclase
AHOnP31_12835	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AHOnP31_12840	COG3788	relative of glutathione S-transferase, MAPEG superfamily
AHOnP31_12845	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
AHOnP31_12850	COG0563	adenylate kinase activity
AHOnP31_12855	COG0326	Molecular chaperone. Has ATPase activity
AHOnP31_12860	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AHOnP31_12885	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AHOnP31_12900	COG3158	transport of potassium into the cell
AHOnP31_12905	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AHOnP31_12910	COG0651	ATP synthesis coupled electron transport
AHOnP31_12915	COG0650	Formate hydrogenlyase subunit 4
AHOnP31_12920	COG3261	NADH dehydrogenase
AHOnP31_12920	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
AHOnP31_12925	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHOnP31_12930	COG3260	NADH ubiquinone oxidoreductase 20
AHOnP31_12940	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AHOnP31_12950	COG1921	L-seryl-tRNASec selenium transferase activity
AHOnP31_12960	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
AHOnP31_12965	COG0298	carbon dioxide binding
AHOnP31_12975	COG0309	Hydrogenase expression formation protein (HypE)
AHOnP31_12980	COG0375	protein maturation
AHOnP31_12985	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
AHOnP31_12990	COG3842	ATPase activity
AHOnP31_13000	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AHOnP31_13005	COG0601	transmembrane transport
AHOnP31_13015	COG1773	rubredoxin
AHOnP31_13020	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AHOnP31_13025	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
AHOnP31_13030	COG5557	Pfam Polysulphide reductase, NrfD
AHOnP31_13035	COG0437	4 iron, 4 sulfur cluster binding
AHOnP31_13040	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
AHOnP31_13055	COG0643	Histidine kinase
AHOnP31_13055	COG2198	Histidine kinase
AHOnP31_13060	COG0840	transmembrane signaling receptor activity
AHOnP31_13060	COG3290	protein histidine kinase activity
AHOnP31_13065	COG0835	chemotaxis
AHOnP31_13075	COG2201	protein-glutamate methylesterase activity
AHOnP31_13085	COG0840	transmembrane signaling receptor activity
AHOnP31_13090	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AHOnP31_13110	COG0659	secondary active sulfate transmembrane transporter activity
AHOnP31_13140	COG0672	)-iron permease
AHOnP31_13160	COG2814	Major facilitator Superfamily
AHOnP31_13170	COG1136	(ABC) transporter
AHOnP31_13175	COG0577	efflux transmembrane transporter activity
AHOnP31_13205	COG1139	Iron-sulfur cluster binding protein
AHOnP31_13215	COG1620	l-lactate permease
AHOnP31_13220	COG0583	DNA-binding transcription factor activity
AHOnP31_13230	COG0346	lactoylglutathione lyase activity
AHOnP31_13235	COG0596	Alpha beta hydrolase
AHOnP31_13255	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AHOnP31_13260	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AHOnP31_13260	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AHOnP31_13265	COG0527	aspartate kinase activity
AHOnP31_13275	COG1368	sulfuric ester hydrolase activity
AHOnP31_13280	COG1619	proteins homologs of microcin C7 resistance protein MccF
AHOnP31_13285	COG4667	esterase of the alpha-beta hydrolase superfamily
AHOnP31_13305	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AHOnP31_13305	COG1648	precorrin-2 dehydrogenase activity
AHOnP31_13315	COG0393	Putative heavy-metal-binding
AHOnP31_13335	COG1252	NADH dehydrogenase
AHOnP31_13340	COG3150	esterase
AHOnP31_13345	COG2233	PERMEase
AHOnP31_13350	COG1164	Oligoendopeptidase f
AHOnP31_13360	COG2354	Protein conserved in bacteria
AHOnP31_13370	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AHOnP31_13375	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AHOnP31_13410	COG0537	adenosine 5'-monophosphoramidase activity
AHOnP31_13425	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AHOnP31_13440	COG1301	dicarboxylic acid transport
AHOnP31_13450	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AHOnP31_13455	COG0861	Integral membrane protein TerC family
AHOnP31_13470	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AHOnP31_13475	COG0601	transmembrane transport
AHOnP31_13485	COG2095	MarC family integral membrane protein
AHOnP31_13495	COG1454	alcohol dehydrogenase
AHOnP31_13495	COG1012	belongs to the aldehyde dehydrogenase family
AHOnP31_13500	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
AHOnP31_13500	COG2199	diguanylate cyclase activity
AHOnP31_13505	COG3275	phosphorelay sensor kinase activity
AHOnP31_13510	COG3279	Response regulator of the LytR AlgR family
AHOnP31_13515	COG1966	Carbon starvation protein
AHOnP31_13525	COG1566	PFAM secretion protein HlyD family protein
AHOnP31_13530	COG1061	Type III restriction enzyme res subunit
AHOnP31_13535	COG2027	D-alanyl-D-alanine carboxypeptidase
AHOnP31_13540	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AHOnP31_13550	COG0436	Aminotransferase
AHOnP31_13555	COG1288	antiporter activity
AHOnP31_13560	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AHOnP31_13575	COG0697	spore germination
AHOnP31_13580	COG4657	Part of a membrane complex involved in electron transport
AHOnP31_13585	COG2878	Part of a membrane complex involved in electron transport
AHOnP31_13595	COG4658	electron transport chain
AHOnP31_13600	COG4659	FMN binding
AHOnP31_13605	COG4660	Part of a membrane complex involved in electron transport
AHOnP31_13610	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AHOnP31_13615	COG0346	lactoylglutathione lyase activity
AHOnP31_13630	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AHOnP31_13635	COG2056	Na+-H+ antiporter family
AHOnP31_13645	COG2050	protein possibly involved in aromatic compounds catabolism
AHOnP31_13655	COG0277	FAD linked oxidase domain protein
AHOnP31_13655	COG0247	lactate metabolic process
AHOnP31_13665	COG1253	flavin adenine dinucleotide binding
AHOnP31_13670	COG1902	pentaerythritol trinitrate reductase activity
AHOnP31_13675	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AHOnP31_13680	COG0647	UMP catabolic process
AHOnP31_13685	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AHOnP31_13685	COG4651	solute:proton antiporter activity
AHOnP31_13695	COG0367	asparagine synthase
AHOnP31_13705	COG0625	glutathione transferase activity
AHOnP31_13710	COG0625	glutathione transferase activity
AHOnP31_13720	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
AHOnP31_13735	COG0564	pseudouridine synthase activity
AHOnP31_13740	COG2203	Gaf domain
AHOnP31_13740	COG2199	diguanylate cyclase activity
AHOnP31_13745	COG0840	transmembrane signaling receptor activity
AHOnP31_13755	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AHOnP31_13755	COG0392	lysyltransferase activity
AHOnP31_13760	COG2194	sulfuric ester hydrolase activity
AHOnP31_13780	COG0670	Belongs to the BI1 family
AHOnP31_13785	COG1289	transmembrane transporter activity
AHOnP31_13790	COG2920	part of a sulfur-relay system
AHOnP31_13795	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
AHOnP31_13800	COG0285	dihydrofolate synthase activity
AHOnP31_13805	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AHOnP31_13810	COG0101	tRNA pseudouridine synthase activity
AHOnP31_13820	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AHOnP31_13825	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AHOnP31_13830	COG0671	phosphoesterase, PA-phosphatase related
AHOnP31_13835	COG1464	Belongs to the NlpA lipoprotein family
AHOnP31_13875	COG0574	Belongs to the PEP-utilizing enzyme family
AHOnP31_13875	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AHOnP31_13880	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
AHOnP31_13940	COG1242	4 iron, 4 sulfur cluster binding
AHOnP31_13945	COG0067	glutamate synthase
AHOnP31_13945	COG0069	glutamate synthase activity
AHOnP31_13945	COG0070	glutamate synthase
AHOnP31_13950	COG0493	'glutamate synthase
AHOnP31_13955	COG1126	abc transporter atp-binding protein
AHOnP31_13960	COG0765	amino acid transport
AHOnP31_13965	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHOnP31_13980	COG0789	Transcriptional regulator
AHOnP31_13995	COG4104	PAAR repeat-containing protein
AHOnP31_14005	COG0513	Belongs to the DEAD box helicase family
AHOnP31_14010	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AHOnP31_14045	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AHOnP31_14050	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AHOnP31_14055	COG0505	Belongs to the CarA family
AHOnP31_14065	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AHOnP31_14075	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AHOnP31_14080	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AHOnP31_14085	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AHOnP31_14090	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AHOnP31_14095	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AHOnP31_14100	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AHOnP31_14110	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
AHOnP31_14120	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHOnP31_14120	COG2205	protein histidine kinase activity
AHOnP31_14135	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AHOnP31_14160	COG0023	Translation Initiation Factor
AHOnP31_14165	COG2119	membrane
AHOnP31_14195	COG2199	diguanylate cyclase activity
AHOnP31_14195	COG2203	Gaf domain
AHOnP31_14230	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AHOnP31_14240	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AHOnP31_14245	COG3301	Polysulphide reductase, NrfD
AHOnP31_14250	COG0437	4 iron, 4 sulfur cluster binding
AHOnP31_14255	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
AHOnP31_14310	COG0322	excinuclease ABC activity
AHOnP31_14315	COG2197	response regulator
AHOnP31_14320	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
AHOnP31_14325	COG2835	tetraacyldisaccharide 4'-kinase activity
AHOnP31_14330	COG1663	tetraacyldisaccharide 4'-kinase activity
AHOnP31_14340	COG0658	competence protein
AHOnP31_14340	COG2333	competence protein COMEC
AHOnP31_14355	COG0433	COG0433 Predicted ATPase
AHOnP31_14360	COG1448	Aminotransferase
AHOnP31_14375	COG1199	ATP-dependent helicase activity
AHOnP31_14385	COG0123	including yeast histone deacetylase and acetoin utilization protein
AHOnP31_14390	COG0477	Major facilitator Superfamily
AHOnP31_14395	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AHOnP31_14420	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AHOnP31_14435	COG2271	Major facilitator Superfamily
AHOnP31_14445	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHOnP31_14450	COG0765	amino acid transport
AHOnP31_14455	COG1126	abc transporter atp-binding protein
AHOnP31_14475	COG0531	amino acid
AHOnP31_14490	COG1253	flavin adenine dinucleotide binding
AHOnP31_14495	COG0704	Plays a role in the regulation of phosphate uptake
AHOnP31_14500	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AHOnP31_14505	COG0581	inorganic phosphate transmembrane transporter activity
AHOnP31_14510	COG0573	inorganic phosphate transmembrane transporter activity
AHOnP31_14515	COG0590	tRNA wobble adenosine to inosine editing
AHOnP31_14530	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AHOnP31_14550	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AHOnP31_14555	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
AHOnP31_14560	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AHOnP31_14565	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AHOnP31_14590	COG2716	regulation of RNA biosynthetic process
AHOnP31_14595	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AHOnP31_14605	COG2239	Acts as a magnesium transporter
AHOnP31_14615	COG1256	bacterial-type flagellum assembly
AHOnP31_14620	COG1705	Flagellar rod assembly protein muramidase FlgJ
AHOnP31_14620	COG3951	Flagellar rod assembly protein muramidase FlgJ
AHOnP31_14625	COG1706	bacterial-type flagellum-dependent cell motility
AHOnP31_14630	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
AHOnP31_14640	COG4787	bacterial-type flagellum-dependent cell motility
AHOnP31_14660	COG1815	bacterial-type flagellum-dependent cell motility
AHOnP31_14665	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AHOnP31_14670	COG0784	Response regulator, receiver
AHOnP31_14670	COG0835	chemotaxis
AHOnP31_14675	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
AHOnP31_14690	COG0622	Phosphoesterase
AHOnP31_14695	COG4166	transmembrane transport
AHOnP31_14720	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AHOnP31_14725	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AHOnP31_14730	COG1882	Formate acetyltransferase
AHOnP31_14735	COG1349	DNA-binding transcription factor activity
AHOnP31_14770	COG1278	Cold shock
AHOnP31_14810	COG3132	Protein of unknown function, DUF480
AHOnP31_14830	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AHOnP31_14850	COG0110	maltose O-acetyltransferase activity
AHOnP31_14870	COG0110	maltose O-acetyltransferase activity
AHOnP31_14875	COG0110	maltose O-acetyltransferase activity
AHOnP31_14895	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AHOnP31_14910	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AHOnP31_14915	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHOnP31_14920	COG1309	transcriptional regulator
AHOnP31_14940	COG1946	Acyl-CoA thioesterase
AHOnP31_14950	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AHOnP31_14960	COG0009	L-threonylcarbamoyladenylate synthase
AHOnP31_14970	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AHOnP31_14975	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AHOnP31_14975	COG0512	Glutamine amidotransferase of anthranilate synthase
AHOnP31_14980	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AHOnP31_14985	COG0135	phosphoribosylanthranilate isomerase activity
AHOnP31_14985	COG0134	indole-3-glycerol-phosphate synthase activity
AHOnP31_14990	COG0133	tryptophan synthase activity
AHOnP31_14995	COG0159	tryptophan synthase activity
AHOnP31_15080	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AHOnP31_15090	COG4521	taurine ABC transporter
AHOnP31_15095	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
AHOnP31_15100	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AHOnP31_15105	COG2175	clavaminate synthase activity
AHOnP31_15115	COG2814	Major facilitator Superfamily
AHOnP31_15120	COG0109	protoheme IX farnesyltransferase activity
AHOnP31_15125	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AHOnP31_15130	COG1845	cytochrome c oxidase, subunit III
AHOnP31_15135	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AHOnP31_15140	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AHOnP31_15185	COG2211	Major facilitator Superfamily
AHOnP31_15200	COG0708	Exodeoxyribonuclease III
AHOnP31_15220	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHOnP31_15225	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AHOnP31_15245	COG0095	Lipoate-protein ligase
AHOnP31_15275	COG0640	Transcriptional regulator
AHOnP31_15290	COG1285	pathogenesis
AHOnP31_15320	COG0484	heat shock protein binding
AHOnP31_15325	COG0443	Heat shock 70 kDa protein
AHOnP31_15330	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AHOnP31_15335	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AHOnP31_15340	COG0497	DNA recombination
AHOnP31_15345	COG1227	inorganic diphosphatase activity
AHOnP31_15355	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHOnP31_15360	COG0577	efflux transmembrane transporter activity
AHOnP31_15360	COG1136	(ABC) transporter
AHOnP31_15370	COG2375	cellular response to nickel ion
AHOnP31_15375	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AHOnP31_15400	COG3152	Membrane
AHOnP31_15415	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AHOnP31_15420	COG1396	sequence-specific DNA binding
AHOnP31_15420	COG1917	Cupin 2, conserved barrel domain protein
AHOnP31_15435	COG0531	amino acid
AHOnP31_15445	COG0531	amino acid
AHOnP31_15455	COG1283	sodium-dependent phosphate transmembrane transporter activity
AHOnP31_15465	COG3384	dioxygenase
AHOnP31_15470	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AHOnP31_15470	COG2205	protein histidine kinase activity
AHOnP31_15485	COG0813	purine-nucleoside phosphorylase activity
AHOnP31_15500	COG0488	(ABC) transporter
AHOnP31_15515	COG4319	ketosteroid isomerase
AHOnP31_15520	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AHOnP31_15525	COG0083	homoserine kinase activity
AHOnP31_15535	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
AHOnP31_15540	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
AHOnP31_15555	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AHOnP31_15565	COG0745	RESPONSE REGULATOR receiver
AHOnP31_15580	COG4988	ABC transporter
AHOnP31_15585	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AHOnP31_15605	COG1720	tRNA m6t6A37 methyltransferase activity
AHOnP31_15620	COG0542	response to heat
AHOnP31_15625	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AHOnP31_15630	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHOnP31_15640	COG2190	(PTS) system
AHOnP31_15645	COG3706	GGDEF domain
AHOnP31_15655	COG3038	cytochrome b561
AHOnP31_15665	COG0419	ATPase involved in DNA repair
AHOnP31_15670	COG0420	3'-5' exonuclease activity
AHOnP31_15680	COG2974	May be involved in recombination
AHOnP31_15690	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AHOnP31_15690	COG4651	solute:proton antiporter activity
AHOnP31_15705	COG0469	pyruvate kinase activity
AHOnP31_15710	COG1196	nuclear chromosome segregation
AHOnP31_15710	COG3264	Mechanosensitive ion channel
AHOnP31_15720	COG2706	6-phosphogluconolactonase activity
AHOnP31_15740	COG0281	malic enzyme
AHOnP31_15755	COG0437	4 iron, 4 sulfur cluster binding
AHOnP31_15760	COG3383	formate dehydrogenase (NAD+) activity
AHOnP31_15760	COG3383	formate dehydrogenase (NAD+) activity
AHOnP31_15795	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AHOnP31_15800	COG1910	domain protein
AHOnP31_15805	COG3852	Histidine kinase
AHOnP31_15810	COG2204	response regulator
AHOnP31_15820	COG4662	Binding-protein-dependent transport system inner membrane component
AHOnP31_15830	COG0746	molybdenum cofactor guanylyltransferase activity
AHOnP31_15840	COG1289	transmembrane transporter activity
AHOnP31_15870	COG3220	belongs to the UPF0276 family
AHOnP31_15900	COG0784	Response regulator, receiver
AHOnP31_15900	COG2205	protein histidine kinase activity
AHOnP31_15905	COG4166	transmembrane transport
AHOnP31_15910	COG0601	transmembrane transport
AHOnP31_15915	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AHOnP31_15920	COG0444	Belongs to the ABC transporter superfamily
AHOnP31_15925	COG4608	Belongs to the ABC transporter superfamily
AHOnP31_15935	COG2971	BadF BadG BcrA BcrD
AHOnP31_15945	COG0840	transmembrane signaling receptor activity
AHOnP31_15965	COG3724	N-succinylarginine dihydrolase activity
AHOnP31_15970	COG0616	signal peptide processing
AHOnP31_15975	COG1028	Short-chain dehydrogenase reductase Sdr
AHOnP31_15980	COG0583	DNA-binding transcription factor activity
AHOnP31_15990	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AHOnP31_16000	COG0583	DNA-binding transcription factor activity
AHOnP31_16005	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AHOnP31_16010	COG1881	PFAM PEBP family protein
AHOnP31_16020	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
AHOnP31_16020	COG3408	Glycogen debranching enzyme
AHOnP31_16025	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AHOnP31_16030	COG0739	heme binding
AHOnP31_16035	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
AHOnP31_16055	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AHOnP31_16065	COG3091	SprT-like family
AHOnP31_16075	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AHOnP31_16080	COG0189	ligase activity
AHOnP31_16090	COG1678	Uncharacterized ACR, COG1678
AHOnP31_16095	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AHOnP31_16100	COG3104	oligopeptide transport
AHOnP31_16125	COG0714	Associated with various cellular activities
AHOnP31_16140	COG1115	amino acid carrier protein
AHOnP31_16145	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AHOnP31_16160	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AHOnP31_16170	COG1301	dicarboxylic acid transport
AHOnP31_16175	COG2877	3-deoxy-8-phosphooctulonate synthase activity
AHOnP31_16180	COG2912	Transglutaminase-like superfamily
AHOnP31_16190	COG2890	protein-(glutamine-N5) methyltransferase activity
AHOnP31_16195	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AHOnP31_16200	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
AHOnP31_16205	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
AHOnP31_16210	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
AHOnP31_16220	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AHOnP31_16225	COG0737	Belongs to the 5'-nucleotidase family
AHOnP31_16230	COG0193	aminoacyl-tRNA hydrolase activity
AHOnP31_16235	COG0012	GTP binding
AHOnP31_16280	COG0471	metal ion transport
AHOnP31_16280	COG0490	domain, Protein
AHOnP31_16300	COG3097	Belongs to the UPF0267 family
AHOnP31_16310	COG0366	Alpha amylase catalytic
AHOnP31_16320	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AHOnP31_16320	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AHOnP31_16320	COG0674	pyruvate-flavodoxin oxidoreductase activity
AHOnP31_16320	COG1013	pyruvate-flavodoxin oxidoreductase activity
AHOnP31_16330	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AHOnP31_16370	COG1012	belongs to the aldehyde dehydrogenase family
AHOnP31_16380	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AHOnP31_16395	COG0180	Tryptophanyl-tRNA synthetase
AHOnP31_16405	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AHOnP31_16415	COG0338	D12 class N6 adenine-specific DNA methyltransferase
AHOnP31_16425	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AHOnP31_16430	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AHOnP31_16460	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AHOnP31_16465	COG0583	DNA-binding transcription factor activity
AHOnP31_16485	COG0583	DNA-binding transcription factor activity
AHOnP31_16500	COG0739	heme binding
AHOnP31_16510	COG1511	domain protein
AHOnP31_16510	COG3264	Mechanosensitive ion channel
AHOnP31_16515	COG0584	glycerophosphoryl diester phosphodiesterase
AHOnP31_16525	COG1053	succinate dehydrogenase
AHOnP31_16530	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AHOnP31_16535	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
AHOnP31_16560	COG3214	Protein conserved in bacteria
AHOnP31_16600	COG0642	Histidine kinase
AHOnP31_16620	COG0516	GMP reductase activity
AHOnP31_16630	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AHOnP31_16635	COG3647	Membrane
AHOnP31_16645	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AHOnP31_16665	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AHOnP31_16680	COG3706	GGDEF domain
AHOnP31_16690	COG1335	isochorismatase
AHOnP31_16695	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AHOnP31_16700	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AHOnP31_16705	COG1702	phosphate starvation-inducible protein PhoH
AHOnP31_16710	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AHOnP31_16715	COG4535	Mg2 and Co2 transporter CorC
AHOnP31_16720	COG0815	Transfers the fatty acyl group on membrane lipoproteins
AHOnP31_16725	COG2888	peptidyl-tyrosine sulfation
AHOnP31_16730	COG0495	leucyl-tRNA aminoacylation
AHOnP31_16750	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AHOnP31_16755	COG0799	negative regulation of ribosome biogenesis
AHOnP31_16760	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AHOnP31_16765	COG0768	penicillin binding
AHOnP31_16770	COG0772	Belongs to the SEDS family
AHOnP31_16775	COG2951	lytic endotransglycosylase activity
AHOnP31_16780	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AHOnP31_16785	COG1686	Belongs to the peptidase S11 family
AHOnP31_16790	COG2921	Belongs to the UPF0250 family
AHOnP31_16795	COG0321	lipoyl(octanoyl) transferase activity
AHOnP31_16800	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AHOnP31_16810	COG3545	Serine hydrolase
AHOnP31_16815	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AHOnP31_16830	COG0789	Transcriptional regulator
AHOnP31_16840	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AHOnP31_16845	COG1970	mechanosensitive ion channel activity
AHOnP31_16850	COG4974	Belongs to the 'phage' integrase family
AHOnP31_16860	COG0312	modulator of DNA gyrase
AHOnP31_16865	COG0312	modulator of DNA gyrase
AHOnP31_16930	COG3275	phosphorelay sensor kinase activity
AHOnP31_16935	COG3279	Response regulator of the LytR AlgR family
AHOnP31_16940	COG1966	Carbon starvation protein
AHOnP31_16950	COG0114	fumarate hydratase activity
AHOnP31_16960	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
AHOnP31_16970	COG2211	Major facilitator Superfamily
AHOnP31_16975	COG1185	polyribonucleotide nucleotidyltransferase activity
AHOnP31_16980	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AHOnP31_16985	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AHOnP31_16990	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AHOnP31_16995	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AHOnP31_17000	COG0195	Participates in both transcription termination and antitermination
AHOnP31_17005	COG0779	Required for maturation of 30S ribosomal subunits
AHOnP31_17020	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AHOnP31_17025	COG0149	triose-phosphate isomerase activity
AHOnP31_17030	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AHOnP31_17035	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AHOnP31_17045	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
AHOnP31_17050	COG1534	Rna-binding protein
AHOnP31_17065	COG1360	Flagellar Motor Protein
AHOnP31_17070	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AHOnP31_17075	COG1722	exodeoxyribonuclease VII activity
AHOnP31_17080	COG0142	geranyltranstransferase activity
AHOnP31_17085	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AHOnP31_17095	COG0601	transmembrane transport
AHOnP31_17105	COG4172	Belongs to the ABC transporter superfamily
AHOnP31_17110	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AHOnP31_17115	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AHOnP31_17120	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AHOnP31_17125	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
AHOnP31_17145	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AHOnP31_17145	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AHOnP31_17150	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AHOnP31_17160	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AHOnP31_17175	COG3381	protein complex oligomerization
AHOnP31_17195	COG5001	Diguanylate cyclase
AHOnP31_17195	COG3300	MHYT domain
AHOnP31_17205	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AHOnP31_17210	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
AHOnP31_17215	COG0511	ligase activity, forming carbon-carbon bonds
AHOnP31_17220	COG0439	Biotin carboxylase
AHOnP31_17230	COG4145	pantothenate transmembrane transporter activity
AHOnP31_17235	COG1263	PTS System
AHOnP31_17235	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHOnP31_17235	COG2190	(PTS) system
AHOnP31_17240	COG0583	DNA-binding transcription factor activity
AHOnP31_17245	COG0604	alcohol dehydrogenase
AHOnP31_17250	COG2264	protein methyltransferase activity
AHOnP31_17260	COG0778	Nitroreductase
AHOnP31_17265	COG0446	pyridine nucleotide-disulphide oxidoreductase
AHOnP31_17265	COG1902	pentaerythritol trinitrate reductase activity
AHOnP31_17270	COG0616	signal peptide processing
AHOnP31_17290	COG3139	Protein of unknown function (DUF1315)
AHOnP31_17295	COG0252	asparaginase activity
AHOnP31_17300	COG0786	glutamate:sodium symporter activity
AHOnP31_17315	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AHOnP31_17320	COG0384	phenazine biosynthesis protein PhzF
AHOnP31_17325	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AHOnP31_17330	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AHOnP31_17335	COG0175	sulfate reduction
AHOnP31_17340	COG2113	Glycine betaine
AHOnP31_17345	COG4176	ABC-type proline glycine betaine transport system permease component
AHOnP31_17350	COG4175	Glycine betaine
AHOnP31_17370	COG3610	response to peptide
AHOnP31_17375	COG2966	Psort location CytoplasmicMembrane, score
AHOnP31_17385	COG0521	Mo-molybdopterin cofactor biosynthetic process
AHOnP31_17395	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AHOnP31_17400	COG1028	Short-chain dehydrogenase reductase Sdr
AHOnP31_17410	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AHOnP31_17435	COG2986	histidine ammonia-lyase
AHOnP31_17460	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AHOnP31_17465	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AHOnP31_17500	COG1858	cytochrome C peroxidase
AHOnP31_17510	COG2313	pseudouridylate synthase activity
AHOnP31_17515	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AHOnP31_17520	COG2146	nitrite reductase [NAD(P)H] activity
AHOnP31_17520	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AHOnP31_17525	COG2146	nitrite reductase [NAD(P)H] activity
AHOnP31_17525	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AHOnP31_17530	COG1116	anion transmembrane transporter activity
AHOnP31_17535	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AHOnP31_17540	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AHOnP31_17540	COG1116	anion transmembrane transporter activity
AHOnP31_17555	COG0243	molybdopterin cofactor binding
AHOnP31_17580	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AHOnP31_17595	COG1073	alpha beta
AHOnP31_17600	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
AHOnP31_17605	COG2195	Cleaves the N-terminal amino acid of tripeptides
AHOnP31_17610	COG4608	Belongs to the ABC transporter superfamily
AHOnP31_17615	COG0444	Belongs to the ABC transporter superfamily
AHOnP31_17625	COG4239	(ABC) transporter, permease
AHOnP31_17630	COG4174	ABC transporter (Permease)
AHOnP31_17635	COG4206	TonB-dependent receptor
AHOnP31_17645	COG0811	peptide transport
AHOnP31_17650	COG0811	peptide transport
AHOnP31_17655	COG0848	biopolymer transport protein
AHOnP31_17705	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AHOnP31_17710	COG0840	transmembrane signaling receptor activity
AHOnP31_17720	COG1278	Cold shock
AHOnP31_17750	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
AHOnP31_17755	COG1162	GTPase activity
AHOnP31_17760	COG0688	phosphatidylethanolamine metabolic process
AHOnP31_17765	COG4628	conserved protein (DUF2132)
AHOnP31_17780	COG3059	membrane
AHOnP31_17785	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AHOnP31_17790	COG2207	Transcriptional regulator
AHOnP31_17800	COG5001	Diguanylate cyclase
AHOnP31_17800	COG3300	MHYT domain
AHOnP31_17805	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
AHOnP31_17830	COG1132	(ABC) transporter
AHOnP31_17840	COG1404	Belongs to the peptidase S8 family
AHOnP31_17845	COG2897	thiosulfate sulfurtransferase activity
AHOnP31_17850	COG2066	Belongs to the glutaminase family
AHOnP31_17855	COG3171	Protein conserved in bacteria
AHOnP31_17860	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AHOnP31_17865	COG4935	Belongs to the peptidase S8 family
AHOnP31_17865	COG2234	aminopeptidase activity
AHOnP31_17870	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AHOnP31_17875	COG2200	EAL domain
AHOnP31_17880	COG1090	epimerase
AHOnP31_17885	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
AHOnP31_17890	COG4181	ATPase activity
AHOnP31_17895	COG2755	lipolytic protein G-D-S-L family
AHOnP31_17900	COG0835	chemotaxis
AHOnP31_17900	COG0784	Response regulator, receiver
AHOnP31_17910	COG0569	domain protein
AHOnP31_17910	COG2985	domain, Protein
AHOnP31_17915	COG1272	protein, Hemolysin III
AHOnP31_17920	COG0076	glutamate decarboxylase activity
AHOnP31_17925	COG2917	probably involved in intracellular septation
AHOnP31_17930	COG2350	Protein conserved in bacteria
AHOnP31_17940	COG1555	photosystem II stabilization
AHOnP31_17945	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AHOnP31_17950	COG3104	oligopeptide transport
AHOnP31_17955	COG0745	RESPONSE REGULATOR receiver
AHOnP31_17985	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AHOnP31_18000	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
AHOnP31_18005	COG1280	lysine exporter protein (LysE YggA)
AHOnP31_18030	COG0316	Belongs to the HesB IscA family
AHOnP31_18040	COG0038	chloride channel
AHOnP31_18045	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AHOnP31_18060	COG0671	phosphoesterase, PA-phosphatase related
AHOnP31_18070	COG3437	response regulator, receiver
AHOnP31_18070	COG0784	Response regulator, receiver
AHOnP31_18080	COG2076	Multidrug Resistance protein
AHOnP31_18090	COG0346	lactoylglutathione lyase activity
AHOnP31_18095	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AHOnP31_18100	COG1643	Atp-dependent helicase
AHOnP31_18110	COG1489	DNA binding
AHOnP31_18115	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AHOnP31_18120	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AHOnP31_18135	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
AHOnP31_18140	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
AHOnP31_18160	COG1924	4 iron, 4 sulfur cluster binding
AHOnP31_18165	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
AHOnP31_18170	COG0842	Transport permease protein
AHOnP31_18175	COG1131	(ABC) transporter
AHOnP31_18190	COG0163	prenyltransferase activity
AHOnP31_18195	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AHOnP31_18200	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AHOnP31_18215	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
AHOnP31_18230	COG1136	(ABC) transporter
AHOnP31_18280	COG0529	Catalyzes the synthesis of activated sulfate
AHOnP31_18285	COG0471	metal ion transport
AHOnP31_18285	COG3273	potassium ion transport
AHOnP31_18290	COG2895	sulfate adenylyltransferase (ATP) activity
AHOnP31_18295	COG0175	sulfate reduction
AHOnP31_18300	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AHOnP31_18300	COG1648	precorrin-2 dehydrogenase activity
AHOnP31_18305	COG0330	HflC and HflK could
AHOnP31_18310	COG1585	Membrane protein implicated in regulation of membrane protease activity
AHOnP31_18315	COG0517	IMP dehydrogenase activity
AHOnP31_18315	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AHOnP31_18320	COG0488	(ABC) transporter
AHOnP31_18330	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
AHOnP31_18335	COG0583	DNA-binding transcription factor activity
AHOnP31_18375	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AHOnP31_18380	COG1376	ErfK ybiS ycfS ynhG family protein
AHOnP31_18385	COG0668	transmembrane transport
AHOnP31_18395	COG2731	YhcH YjgK YiaL family protein
AHOnP31_18410	COG1794	racemase activity, acting on amino acids and derivatives
AHOnP31_18425	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AHOnP31_18450	COG0733	neurotransmitter:sodium symporter activity
AHOnP31_18460	COG0733	neurotransmitter:sodium symporter activity
AHOnP31_18475	COG0561	phosphatase activity
AHOnP31_18510	COG1846	Transcriptional regulator
AHOnP31_18515	COG1764	response to oxidative stress
AHOnP31_18520	COG2130	NADP-dependent
AHOnP31_18525	COG1051	belongs to the nudix hydrolase family
AHOnP31_18545	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AHOnP31_18550	COG1640	4-alpha-glucanotransferase
AHOnP31_18555	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AHOnP31_18560	COG0676	glucose-6-phosphate 1-epimerase activity
AHOnP31_18565	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AHOnP31_18570	COG0840	transmembrane signaling receptor activity
AHOnP31_18615	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
AHOnP31_18620	COG2885	chlorophyll binding
AHOnP31_18625	COG0823	Involved in the tonB-independent uptake of proteins
AHOnP31_18640	COG0811	peptide transport
AHOnP31_18645	COG0824	Thioesterase
AHOnP31_18650	COG3790	cyd operon protein YbgE
AHOnP31_18655	COG4890	Cyd operon protein YbgT
AHOnP31_18660	COG1294	oxidase, subunit
AHOnP31_18665	COG1271	oxidase subunit
AHOnP31_18670	COG2255	four-way junction helicase activity
AHOnP31_18675	COG0632	four-way junction helicase activity
AHOnP31_18680	COG0840	transmembrane signaling receptor activity
AHOnP31_18685	COG0442	prolyl-tRNA aminoacylation
AHOnP31_18690	COG4221	oxidoreductase activity
AHOnP31_18705	COG1024	Enoyl-CoA hydratase
AHOnP31_18725	COG4166	transmembrane transport
AHOnP31_18740	COG1872	DUF167
AHOnP31_18745	COG0762	integral membrane protein
AHOnP31_18750	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AHOnP31_18755	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AHOnP31_18770	COG3022	response to hydroperoxide
AHOnP31_18775	COG0513	Belongs to the DEAD box helicase family
AHOnP31_18780	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
AHOnP31_18805	COG0735	belongs to the Fur family
AHOnP31_18810	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AHOnP31_18825	COG0776	regulation of translation
AHOnP31_18835	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
AHOnP31_18860	COG0560	Phosphoserine phosphatase
AHOnP31_18870	COG5002	protein histidine kinase activity
AHOnP31_18870	COG5001	Diguanylate cyclase
AHOnP31_18870	COG3447	MASE1 domain protein
AHOnP31_18875	COG0813	purine-nucleoside phosphorylase activity
AHOnP31_18880	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AHOnP31_18885	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
AHOnP31_18890	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AHOnP31_18900	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AHOnP31_18905	COG0084	hydrolase, TatD family'
AHOnP31_18910	COG2165	general secretion pathway protein
AHOnP31_18920	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AHOnP31_18925	COG0004	ammonium transporteR
AHOnP31_18940	COG0795	lipopolysaccharide-transporting ATPase activity
AHOnP31_18945	COG0795	lipopolysaccharide-transporting ATPase activity
AHOnP31_18950	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AHOnP31_18955	COG2927	DNA polymerase III (CHI subunit)
AHOnP31_18960	COG0525	valine-tRNA ligase activity
AHOnP31_18965	COG1253	flavin adenine dinucleotide binding
AHOnP31_18970	COG0586	Pfam SNARE associated Golgi protein
AHOnP31_18975	COG1686	Belongs to the peptidase S11 family
AHOnP31_19010	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
AHOnP31_19015	COG0527	aspartate kinase activity
AHOnP31_19020	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AHOnP31_19030	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AHOnP31_19035	COG1546	Belongs to the CinA family
AHOnP31_19040	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AHOnP31_19060	COG3068	Protein conserved in bacteria
AHOnP31_19070	COG0739	heme binding
AHOnP31_19090	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
AHOnP31_19095	COG1121	(ABC) transporter
AHOnP31_19100	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AHOnP31_19105	COG0583	DNA-binding transcription factor activity
AHOnP31_19110	COG0697	spore germination
AHOnP31_19115	COG1573	uracil-dna glycosylase
AHOnP31_19120	COG2962	Rard protein
AHOnP31_19130	COG2827	Endonuclease containing a URI domain
AHOnP31_19145	COG1842	Phage shock protein A
AHOnP31_19150	COG0204	Acyl-transferase
AHOnP31_19170	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AHOnP31_19220	COG1289	transmembrane transporter activity
AHOnP31_19225	COG1566	PFAM secretion protein HlyD family protein
AHOnP31_19240	COG1051	belongs to the nudix hydrolase family
AHOnP31_19245	COG3150	esterase
AHOnP31_19255	COG3151	Protein conserved in bacteria
AHOnP31_19260	COG0494	nUDIX hydrolase
AHOnP31_19265	COG1538	Outer membrane efflux protein
AHOnP31_19270	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AHOnP31_19270	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
AHOnP31_19275	COG1560	Kdo2-lipid A biosynthetic process
AHOnP31_19290	COG1392	Phosphate transport regulator
AHOnP31_19295	COG0306	phosphate transporter
AHOnP31_19300	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AHOnP31_19330	COG0583	DNA-binding transcription factor activity
AHOnP31_19335	COG1380	Effector of murein hydrolase LrgA
AHOnP31_19340	COG1346	cytolysis
AHOnP31_19355	COG0617	tRNA 3'-terminal CCA addition
AHOnP31_19360	COG3409	Peptidoglycan-binding domain 1 protein
AHOnP31_19360	COG3267	Type II secretory pathway component ExeA
AHOnP31_19370	COG1194	a g-specific adenine glycosylase
AHOnP31_19375	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
AHOnP31_19385	COG3111	PFAM Bacterial OB fold (BOF) protein
AHOnP31_19390	COG3240	lipase activity
AHOnP31_19400	COG2885	chlorophyll binding
AHOnP31_19400	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AHOnP31_19405	COG3009	Protein conserved in bacteria
AHOnP31_19410	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AHOnP31_19410	COG3008	intermembrane lipid transfer
AHOnP31_19415	COG2995	paraquat-inducible protein a
AHOnP31_19425	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AHOnP31_19435	COG2203	Gaf domain
AHOnP31_19435	COG3706	GGDEF domain
AHOnP31_19435	COG4251	negative regulation of phosphorylation
AHOnP31_19435	COG5001	Diguanylate cyclase
AHOnP31_19440	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AHOnP31_19445	COG2813	Specifically methylates the guanine in position
AHOnP31_19450	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AHOnP31_19455	COG0297	glycogen (starch) synthase activity
AHOnP31_19495	COG1757	Na H antiporter
AHOnP31_19500	COG0583	DNA-binding transcription factor activity
AHOnP31_19505	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AHOnP31_19510	COG3842	ATPase activity
AHOnP31_19515	COG1176	ABC-type spermidine putrescine transport system, permease component I
AHOnP31_19520	COG1177	transmembrane transport
AHOnP31_19525	COG1012	belongs to the aldehyde dehydrogenase family
AHOnP31_19535	COG5006	permease, DMT superfamily
AHOnP31_19540	COG1522	sequence-specific DNA binding
AHOnP31_19545	COG0110	maltose O-acetyltransferase activity
AHOnP31_19550	COG0366	Alpha amylase catalytic
AHOnP31_19555	COG1263	PTS System
AHOnP31_19555	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AHOnP31_19575	COG0252	asparaginase activity
AHOnP31_19590	COG1803	Methylglyoxal synthase
AHOnP31_19615	COG1444	tRNA N-acetyltransferase activity
AHOnP31_19620	COG1028	Short-chain dehydrogenase reductase Sdr
AHOnP31_19625	COG0784	Response regulator, receiver
AHOnP31_19625	COG0835	chemotaxis
AHOnP31_19630	COG3314	Sporulation integral membrane protein YlbJ
AHOnP31_19670	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
AHOnP31_19675	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AHOnP31_19690	COG0477	Major facilitator Superfamily
AHOnP31_19695	COG0523	cobalamin synthesis protein
AHOnP31_19705	COG1280	lysine exporter protein (LysE YggA)
AHOnP31_19715	COG1049	propionate catabolic process, 2-methylcitrate cycle
AHOnP31_19720	COG1752	Esterase of the alpha-beta hydrolase superfamily
AHOnP31_19725	COG0840	transmembrane signaling receptor activity
AHOnP31_19730	COG0840	transmembrane signaling receptor activity
AHOnP31_19740	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AHOnP31_19745	COG0508	dehydrogenase complex catalyzes the overall conversion of
AHOnP31_19750	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
AHOnP31_19755	COG2186	Transcriptional regulator
AHOnP31_19780	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AHOnP31_19785	COG1459	type II secretion system
AHOnP31_19800	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
AHOnP31_19805	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
AHOnP31_19810	COG0494	nUDIX hydrolase
AHOnP31_19820	COG0653	protein targeting
AHOnP31_19830	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
AHOnP31_19835	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AHOnP31_19840	COG0849	cell division
AHOnP31_19845	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AHOnP31_19850	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AHOnP31_19855	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AHOnP31_19860	COG0772	Belongs to the SEDS family
AHOnP31_19865	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AHOnP31_19870	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AHOnP31_19875	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AHOnP31_19885	COG0768	penicillin binding
AHOnP31_19890	COG3116	cell division
AHOnP31_19895	COG0275	rRNA processing
AHOnP31_19900	COG2001	Belongs to the MraZ family
AHOnP31_19910	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AHOnP31_19915	COG3107	peptidoglycan biosynthetic process
AHOnP31_19920	COG0792	nuclease activity
AHOnP31_19925	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
AHOnP31_19930	COG2823	Periplasmic or secreted lipoprotein
AHOnP31_19935	COG2969	positive regulation of protein catabolic process
AHOnP31_19940	COG0625	glutathione transferase activity
AHOnP31_19945	COG2857	Cytochrome c1
AHOnP31_19950	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AHOnP31_19955	COG0723	plastoquinol--plastocyanin reductase activity
AHOnP31_19960	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AHOnP31_19965	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AHOnP31_19970	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AHOnP31_19980	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AHOnP31_19985	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AHOnP31_20015	COG3964	amidohydrolase
AHOnP31_20030	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHOnP31_20030	COG3711	transcriptional antiterminator
AHOnP31_20035	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHOnP31_20040	COG1660	Displays ATPase and GTPase activities
AHOnP31_20045	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AHOnP31_20055	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
AHOnP31_20060	COG1137	ATPase activity
AHOnP31_20065	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
AHOnP31_20070	COG3117	lipopolysaccharide transmembrane transporter activity
AHOnP31_20075	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
AHOnP31_20080	COG0517	IMP dehydrogenase activity
AHOnP31_20080	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AHOnP31_20085	COG1127	ABC transporter
AHOnP31_20090	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AHOnP31_20095	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AHOnP31_20100	COG2854	intermembrane phospholipid transfer
AHOnP31_20110	COG5007	Belongs to the BolA IbaG family
AHOnP31_20115	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AHOnP31_20120	COG0312	modulator of DNA gyrase
AHOnP31_20125	COG3028	Belongs to the UPF0307 family
AHOnP31_20135	COG2926	Belongs to the UPF0265 family
AHOnP31_20170	COG1396	sequence-specific DNA binding
AHOnP31_20175	COG3135	benzoate transporter
AHOnP31_20200	COG0840	transmembrane signaling receptor activity
AHOnP31_20205	COG3047	cAMP biosynthetic process
AHOnP31_20215	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AHOnP31_20220	COG2197	response regulator
AHOnP31_20225	COG0629	single-stranded DNA binding
AHOnP31_20245	COG1278	Cold shock
AHOnP31_20250	COG4771	TonB-dependent receptor
AHOnP31_20255	COG5001	Diguanylate cyclase
AHOnP31_20255	COG4251	negative regulation of phosphorylation
AHOnP31_20255	COG3706	GGDEF domain
AHOnP31_20255	COG2203	Gaf domain
AHOnP31_20300	COG0346	lactoylglutathione lyase activity
AHOnP31_20310	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AHOnP31_20315	COG1074	ATP-dependent DNA helicase activity
AHOnP31_20320	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
AHOnP31_20325	COG2259	Doxx family
AHOnP31_20330	COG1741	Belongs to the pirin family
AHOnP31_20340	COG0583	DNA-binding transcription factor activity
AHOnP31_20365	COG1175	transmembrane transport
AHOnP31_20375	COG3842	ATPase activity
AHOnP31_20385	COG2199	diguanylate cyclase activity
AHOnP31_20385	COG2203	Gaf domain
AHOnP31_20405	COG1247	-acetyltransferase
AHOnP31_20410	COG0753	catalase activity
AHOnP31_20435	COG0494	nUDIX hydrolase
AHOnP31_20440	COG0628	permease
AHOnP31_20445	COG4221	oxidoreductase activity
AHOnP31_20450	COG2957	Belongs to the agmatine deiminase family
AHOnP31_20460	COG3284	Transcriptional regulator
AHOnP31_20475	COG1461	Dihydroxyacetone kinase
AHOnP31_20480	COG2376	Dihydroxyacetone kinase
AHOnP31_20485	COG2252	PERMEase
AHOnP31_20520	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AHOnP31_20525	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AHOnP31_20530	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AHOnP31_20535	COG0049	tRNA binding
AHOnP31_20540	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AHOnP31_20545	COG2168	tRNA wobble position uridine thiolation
AHOnP31_20550	COG2923	Belongs to the DsrF TusC family
AHOnP31_20560	COG0251	oxidation-reduction process
AHOnP31_20565	COG2964	Protein conserved in bacteria
AHOnP31_20570	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AHOnP31_20575	COG0085	RNA polymerase activity
AHOnP31_20580	COG0222	ribosome binding
AHOnP31_20585	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AHOnP31_20590	COG0081	regulation of translation
AHOnP31_20595	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AHOnP31_20600	COG0250	Participates in transcription elongation, termination and antitermination
AHOnP31_20615	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AHOnP31_20640	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AHOnP31_20645	COG0569	domain protein
AHOnP31_20650	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AHOnP31_20670	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AHOnP31_20675	COG3005	denitrification pathway
AHOnP31_20680	COG0243	molybdopterin cofactor binding
AHOnP31_20710	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
AHOnP31_20725	COG2204	response regulator
AHOnP31_20735	COG2205	protein histidine kinase activity
AHOnP31_20760	COG5413	integral membrane protein
AHOnP31_20770	COG1522	sequence-specific DNA binding
AHOnP31_20775	COG2502	aspartate--ammonia ligase
AHOnP31_20780	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AHOnP31_20785	COG0542	response to heat
AHOnP31_20795	COG0564	pseudouridine synthase activity
AHOnP31_20800	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AHOnP31_20805	COG0446	pyridine nucleotide-disulphide oxidoreductase
AHOnP31_20815	COG3681	Belongs to the UPF0597 family
AHOnP31_20825	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AHOnP31_20830	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AHOnP31_20835	COG1979	alcohol dehydrogenase
AHOnP31_20840	COG2207	Transcriptional regulator
AHOnP31_20845	COG3040	lipid binding
AHOnP31_20860	COG0583	DNA-binding transcription factor activity
AHOnP31_20870	COG0688	phosphatidylethanolamine metabolic process
AHOnP31_20890	COG0540	Belongs to the ATCase OTCase family
AHOnP31_20895	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
AHOnP31_20900	COG1438	arginine binding
AHOnP31_20905	COG1288	antiporter activity
AHOnP31_20910	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AHOnP31_20960	COG3250	beta-galactosidase activity
AHOnP31_20965	COG1609	Transcriptional regulator
AHOnP31_20970	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AHOnP31_20980	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AHOnP31_20985	COG2017	converts alpha-aldose to the beta-anomer
AHOnP31_20990	COG0667	Aldo Keto reductase
AHOnP31_20995	COG1968	undecaprenyl-diphosphatase activity
AHOnP31_21000	COG3806	Anti-sigma factor
AHOnP31_21005	COG1595	DNA-templated transcription, initiation
AHOnP31_21025	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AHOnP31_21030	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
AHOnP31_21040	COG0477	Major facilitator Superfamily
AHOnP31_21050	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AHOnP31_21060	COG2116	formate transmembrane transporter activity
AHOnP31_21065	COG1648	precorrin-2 dehydrogenase activity
AHOnP31_21065	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AHOnP31_21070	COG2239	Acts as a magnesium transporter
AHOnP31_21080	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AHOnP31_21085	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
AHOnP31_21095	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
AHOnP31_21105	COG0514	ATP-dependent DNA helicase (RecQ)
AHOnP31_21110	COG2050	protein possibly involved in aromatic compounds catabolism
AHOnP31_21125	COG2258	MOSC domain
AHOnP31_21130	COG1177	transmembrane transport
AHOnP31_21135	COG1176	ABC-type spermidine putrescine transport system, permease component I
AHOnP31_21140	COG3842	ATPase activity
AHOnP31_21160	COG0174	glutamine synthetase
AHOnP31_21180	COG3045	CreA protein
AHOnP31_21185	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AHOnP31_21190	COG0443	Heat shock 70 kDa protein
AHOnP31_21205	COG0366	Alpha amylase catalytic
AHOnP31_21210	COG1086	Polysaccharide biosynthesis protein
AHOnP31_21215	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AHOnP31_21220	COG4750	Nucleotidyl transferase
AHOnP31_21225	COG0519	Catalyzes the synthesis of GMP from XMP
AHOnP31_21230	COG0574	Belongs to the PEP-utilizing enzyme family
AHOnP31_21230	COG3848	Pyruvate phosphate dikinase
AHOnP31_21240	COG0529	Catalyzes the synthesis of activated sulfate
AHOnP31_21280	COG1215	transferase activity, transferring glycosyl groups
AHOnP31_21295	COG0318	PFAM AMP-dependent synthetase and ligase
AHOnP31_21300	COG1028	Short-chain dehydrogenase reductase Sdr
AHOnP31_21315	COG1083	cytidylyl-transferase
AHOnP31_21325	COG2089	acid synthase
AHOnP31_21345	COG4310	Domain of unknown function (DUF2172)
AHOnP31_21380	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AHOnP31_21385	COG0745	RESPONSE REGULATOR receiver
AHOnP31_21390	COG2205	protein histidine kinase activity
AHOnP31_21400	COG0281	malic enzyme
AHOnP31_21405	COG0702	epimerase
AHOnP31_21410	COG0254	rRNA binding
AHOnP31_21415	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AHOnP31_21435	COG0129	dihydroxy-acid dehydratase activity
AHOnP31_21445	COG3978	acetolactate synthase activity
AHOnP31_21455	COG0606	chelatase, subunit chli
AHOnP31_21460	COG0204	Acyl-transferase
AHOnP31_21465	COG0204	Acyl-transferase
AHOnP31_21470	COG1683	Conserved Protein
AHOnP31_21480	COG1335	isochorismatase
AHOnP31_21490	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AHOnP31_21495	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AHOnP31_21505	COG3084	Protein conserved in bacteria
AHOnP31_21510	COG5001	Diguanylate cyclase
AHOnP31_21510	COG2203	Gaf domain
AHOnP31_21510	COG3706	GGDEF domain
AHOnP31_21510	COG4251	negative regulation of phosphorylation
AHOnP31_21515	COG0789	Transcriptional regulator
AHOnP31_21525	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AHOnP31_21530	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
AHOnP31_21535	COG1561	YicC-like family, N-terminal region
AHOnP31_21555	COG3306	glycosyltransferase involved in LPS biosynthesis
AHOnP31_21570	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AHOnP31_21580	COG0156	8-amino-7-oxononanoate synthase activity
AHOnP31_21585	COG1063	alcohol dehydrogenase
AHOnP31_21590	COG3245	cytochrome
AHOnP31_21600	COG0210	DNA helicase
AHOnP31_21605	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AHOnP31_21610	COG2166	iron-sulfur cluster assembly
AHOnP31_21615	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AHOnP31_21655	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
AHOnP31_21660	COG0848	biopolymer transport protein
AHOnP31_21665	COG0811	peptide transport
AHOnP31_21670	COG0811	peptide transport
AHOnP31_21680	COG2771	luxR family
AHOnP31_21685	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AHOnP31_21690	COG1349	DNA-binding transcription factor activity
AHOnP31_21695	COG0745	RESPONSE REGULATOR receiver
AHOnP31_21700	COG2205	protein histidine kinase activity
AHOnP31_21710	COG4452	Inner membrane protein CreD
AHOnP31_21715	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AHOnP31_21720	COG0355	proton-transporting ATP synthase activity, rotational mechanism
AHOnP31_21725	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AHOnP31_21730	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AHOnP31_21735	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AHOnP31_21740	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AHOnP31_21745	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AHOnP31_21755	COG0356	it plays a direct role in the translocation of protons across the membrane
AHOnP31_21765	COG1475	DNA binding
AHOnP31_21770	COG1192	Involved in chromosome partitioning
AHOnP31_21775	COG0357	Ribosomal RNA small subunit methyltransferase G
AHOnP31_21780	COG0445	tRNA wobble uridine modification
AHOnP31_21785	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AHOnP31_21790	COG4774	siderophore transport
AHOnP31_21795	COG4615	Cyclic peptide transporter
AHOnP31_21800	COG1120	ATPase activity
AHOnP31_21815	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AHOnP31_21820	COG0706	membrane insertase activity
AHOnP31_21825	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AHOnP31_21830	COG0594	ribonuclease P activity
AHOnP31_21835	COG0230	Belongs to the bacterial ribosomal protein bL34 family
AHOnP31_21840	COG1126	abc transporter atp-binding protein