locus-tag class description C3B79_0001 PF13580 SIS domain C3B79_0002 PF04972 BON domain C3B79_0003 PF04386 Stringent starvation protein B C3B79_0004 PF02798 Glutathione S-transferase, N-terminal domain C3B79_0004 PF00043 Glutathione S-transferase, C-terminal domain C3B79_0005 PF02167 Cytochrome C1 family C3B79_0006 PF00032 Cytochrome b(C-terminal)/b6/petD C3B79_0006 PF00033 Cytochrome b/b6/petB C3B79_0007 PF00032 Cytochrome b(C-terminal)/b6/petD C3B79_0007 PF00033 Cytochrome b/b6/petB C3B79_0008 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal C3B79_0008 PF00355 Rieske [2Fe-2S] domain C3B79_0010 PF00380 Ribosomal protein S9/S16 C3B79_0011 PF00572 Ribosomal protein L13 C3B79_0013 PF03969 AFG1-like ATPase C3B79_0015 PF00595 PDZ domain C3B79_0015 PF13180 PDZ domain C3B79_0016 PF13180 PDZ domain C3B79_0022 PF01979 Amidohydrolase family C3B79_0023 PF03841 L-seryl-tRNA selenium transferase C3B79_0024 PF07071 KDGP aldolase C3B79_0025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3B79_0025 PF00874 PRD domain C3B79_0025 PF05043 Mga helix-turn-helix domain C3B79_0025 PF08279 HTH domain C3B79_0026 PF00381 PTS HPr component phosphorylation site C3B79_0027 PF03668 P-loop ATPase protein family C3B79_0028 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3B79_0029 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C3B79_0030 PF04552 Sigma-54, DNA binding domain C3B79_0030 PF04963 Sigma-54 factor, core binding domain C3B79_0030 PF00309 Sigma-54 factor, Activator interacting domain (AID) C3B79_0031 PF12399 Branched-chain amino acid ATP-binding cassette transporter C3B79_0031 PF00005 ABC transporter C3B79_0032 PF03968 OstA-like protein C3B79_0033 PF06835 Lipopolysaccharide-assembly, LptC-related C3B79_0035 PF01380 SIS domain C3B79_0035 PF00571 CBS domain C3B79_0036 PF00005 ABC transporter C3B79_0037 PF02405 Permease MlaE C3B79_0038 PF02470 MlaD protein C3B79_0039 PF05494 MlaC protein C3B79_0041 PF01722 BolA-like protein C3B79_0042 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C3B79_0043 PF01523 Putative modulator of DNA gyrase C3B79_0044 PF01523 Putative modulator of DNA gyrase C3B79_0045 PF04751 Protein of unknown function (DUF615) C3B79_0047 PF04363 Protein of unknown function (DUF496) C3B79_0056 PF01381 Helix-turn-helix C3B79_0056 PF07883 Cupin domain C3B79_0057 PF03594 Benzoate membrane transport protein C3B79_0059 PF02219 Methylenetetrahydrofolate reductase C3B79_0063 PF00672 HAMP domain C3B79_0063 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_0064 PF03922 OmpW family C3B79_0066 PF17158 Membrane-associated sensor, integral membrane domain C3B79_0066 PF00990 Diguanylate cyclase, GGDEF domain C3B79_0067 PF17755 UvrA DNA-binding domain C3B79_0067 PF17760 UvrA interaction domain C3B79_0067 PF00005 ABC transporter C3B79_0068 PF00005 ABC transporter C3B79_0068 PF17755 UvrA DNA-binding domain C3B79_0068 PF17760 UvrA interaction domain C3B79_0069 PF00196 Bacterial regulatory proteins, luxR family C3B79_0070 PF00436 Single-strand binding protein family C3B79_0073 PF16916 Dimerisation domain of Zinc Transporter C3B79_0073 PF01545 Cation efflux family C3B79_0075 PF00313 'Cold-shock' DNA-binding domain C3B79_0076 PF00593 TonB dependent receptor C3B79_0076 PF07715 TonB-dependent Receptor Plug Domain C3B79_0077 PF08448 PAS fold C3B79_0077 PF00990 Diguanylate cyclase, GGDEF domain C3B79_0078 PF00672 HAMP domain C3B79_0078 PF00512 His Kinase A (phospho-acceptor) domain C3B79_0078 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_0080 PF00072 Response regulator receiver domain C3B79_0080 PF00486 Transcriptional regulatory protein, C terminal C3B79_0085 PF07694 5TMR of 5TMR-LYT C3B79_0085 PF00990 Diguanylate cyclase, GGDEF domain C3B79_0087 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3B79_0089 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C3B79_0092 PF13538 UvrD-like helicase C-terminal domain C3B79_0093 PF12705 PD-(D/E)XK nuclease superfamily C3B79_0093 PF00580 UvrD/REP helicase N-terminal domain C3B79_0093 PF13361 UvrD-like helicase C-terminal domain C3B79_0094 PF17946 RecC C-terminal domain C3B79_0095 PF07681 DoxX C3B79_0096 PF02678 Pirin C3B79_0096 PF17954 Quercetinase C-terminal cupin domain C3B79_0098 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_0098 PF03466 LysR substrate binding domain C3B79_0100 PF00392 Bacterial regulatory proteins, gntR family C3B79_0100 PF07702 UTRA domain C3B79_0103 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_0105 PF08402 TOBE domain C3B79_0105 PF00005 ABC transporter C3B79_0107 PF17158 Membrane-associated sensor, integral membrane domain C3B79_0107 PF00990 Diguanylate cyclase, GGDEF domain C3B79_0113 PF00583 Acetyltransferase (GNAT) family C3B79_0114 PF06628 Catalase-related immune-responsive C3B79_0114 PF00199 Catalase C3B79_0119 PF00293 NUDIX domain C3B79_0120 PF01594 AI-2E family transporter C3B79_0123 PF04371 Porphyromonas-type peptidyl-arginine deiminase C3B79_0124 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_0124 PF03466 LysR substrate binding domain C3B79_0125 PF00158 Sigma-54 interaction domain C3B79_0125 PF02954 Bacterial regulatory protein, Fis family C3B79_0125 PF00989 PAS fold C3B79_0126 PF00465 Iron-containing alcohol dehydrogenase C3B79_0127 PF03610 PTS system fructose IIA component C3B79_0127 PF00381 PTS HPr component phosphorylation site C3B79_0127 PF00391 PEP-utilising enzyme, mobile domain C3B79_0127 PF05524 PEP-utilising enzyme, N-terminal C3B79_0128 PF02734 DAK2 domain C3B79_0129 PF02733 Dak1 domain C3B79_0130 PF00860 Permease family C3B79_0141 PF03143 Elongation factor Tu C-terminal domain C3B79_0141 PF03144 Elongation factor Tu domain 2 C3B79_0141 PF00009 Elongation factor Tu GTP binding domain C3B79_0142 PF00679 Elongation factor G C-terminus C3B79_0142 PF03764 Elongation factor G, domain IV C3B79_0142 PF00009 Elongation factor Tu GTP binding domain C3B79_0142 PF14492 Elongation Factor G, domain II C3B79_0142 PF03144 Elongation factor Tu domain 2 C3B79_0143 PF00177 Ribosomal protein S7p/S5e C3B79_0144 PF00164 Ribosomal protein S12/S23 C3B79_0145 PF04077 DsrH like protein C3B79_0146 PF02635 DsrE/DsrF-like family C3B79_0147 PF02635 DsrE/DsrF-like family C3B79_0148 PF01042 Endoribonuclease L-PSP C3B79_0149 PF13309 HTH domain C3B79_0149 PF08348 YheO-like PAS domain C3B79_0150 PF04997 RNA polymerase Rpb1, domain 1 C3B79_0150 PF00623 RNA polymerase Rpb1, domain 2 C3B79_0150 PF04983 RNA polymerase Rpb1, domain 3 C3B79_0150 PF05000 RNA polymerase Rpb1, domain 4 C3B79_0150 PF04998 RNA polymerase Rpb1, domain 5 C3B79_0151 PF04563 RNA polymerase beta subunit C3B79_0151 PF04560 RNA polymerase Rpb2, domain 7 C3B79_0151 PF00562 RNA polymerase Rpb2, domain 6 C3B79_0151 PF10385 RNA polymerase beta subunit external 1 domain C3B79_0151 PF04561 RNA polymerase Rpb2, domain 2 C3B79_0151 PF04565 RNA polymerase Rpb2, domain 3 C3B79_0152 PF16320 Ribosomal protein L7/L12 dimerisation domain C3B79_0152 PF00542 Ribosomal protein L7/L12 C-terminal domain C3B79_0153 PF00466 Ribosomal protein L10 C3B79_0154 PF00687 Ribosomal protein L1p/L10e family C3B79_0155 PF03946 Ribosomal protein L11, N-terminal domain C3B79_0155 PF00298 Ribosomal protein L11, RNA binding domain C3B79_0156 PF02357 Transcription termination factor nusG C3B79_0156 PF00467 KOW motif C3B79_0157 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C3B79_0159 PF00009 Elongation factor Tu GTP binding domain C3B79_0159 PF03144 Elongation factor Tu domain 2 C3B79_0159 PF03143 Elongation factor Tu C-terminal domain C3B79_0162 PF00485 Phosphoribulokinase / Uridine kinase family C3B79_0163 PF03099 Biotin/lipoate A/B protein ligase family C3B79_0163 PF02237 Biotin protein ligase C terminal domain C3B79_0163 PF08279 HTH domain C3B79_0164 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C3B79_0164 PF01565 FAD binding domain C3B79_0165 PF02080 TrkA-C domain C3B79_0165 PF02254 TrkA-N domain C3B79_0166 PF02386 Cation transport protein C3B79_0167 PF02386 Cation transport protein C3B79_0168 PF12852 Cupin C3B79_0168 PF12833 Helix-turn-helix domain C3B79_0171 PF01751 Toprim domain C3B79_0171 PF01131 DNA topoisomerase C3B79_0172 PF01131 DNA topoisomerase C3B79_0172 PF01751 Toprim domain C3B79_0173 PF01131 DNA topoisomerase C3B79_0173 PF01751 Toprim domain C3B79_0175 PF03264 NapC/NirT cytochrome c family, N-terminal region C3B79_0176 PF01568 Molydopterin dinucleotide binding domain C3B79_0176 PF18364 Molybdopterin oxidoreductase N-terminal domain C3B79_0176 PF00384 Molybdopterin oxidoreductase C3B79_0178 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_0178 PF08918 PhoQ Sensor C3B79_0179 PF00072 Response regulator receiver domain C3B79_0179 PF00486 Transcriptional regulatory protein, C terminal C3B79_0182 PF01794 Ferric reductase like transmembrane component C3B79_0183 PF00174 Oxidoreductase molybdopterin binding domain C3B79_0184 PF06496 Protein of unknown function (DUF1097) C3B79_0185 PF00072 Response regulator receiver domain C3B79_0185 PF00158 Sigma-54 interaction domain C3B79_0187 PF00512 His Kinase A (phospho-acceptor) domain C3B79_0187 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_0191 PF00478 IMP dehydrogenase / GMP reductase domain C3B79_0191 PF00571 CBS domain C3B79_0192 PF10063 Uncharacterized integral membrane protein (DUF2301) C3B79_0194 PF01037 Lrp/AsnC ligand binding domain C3B79_0195 PF03590 Aspartate-ammonia ligase C3B79_0197 PF00004 ATPase family associated with various cellular activities (AAA) C3B79_0197 PF07724 AAA domain (Cdc48 subfamily) C3B79_0197 PF10431 C-terminal, D2-small domain, of ClpB protein C3B79_0197 PF02861 Clp amino terminal domain, pathogenicity island component C3B79_0197 PF17871 AAA lid domain C3B79_0199 PF00849 RNA pseudouridylate synthase C3B79_0199 PF01479 S4 domain C3B79_0200 PF13525 Outer membrane lipoprotein C3B79_0201 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3B79_0201 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3B79_0202 PF00375 Sodium:dicarboxylate symporter family C3B79_0203 PF03313 Serine dehydratase alpha chain C3B79_0205 PF02233 NAD(P) transhydrogenase beta subunit C3B79_0206 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C3B79_0206 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C3B79_0206 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C3B79_0207 PF00465 Iron-containing alcohol dehydrogenase C3B79_0208 PF12833 Helix-turn-helix domain C3B79_0208 PF06719 AraC-type transcriptional regulator N-terminus C3B79_0209 PF08212 Lipocalin-like domain C3B79_0210 PF00672 HAMP domain C3B79_0210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_0210 PF02743 Cache domain C3B79_0212 PF02666 Phosphatidylserine decarboxylase C3B79_0217 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C3B79_0217 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C3B79_0218 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain C3B79_0218 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain C3B79_0219 PF01316 Arginine repressor, DNA binding domain C3B79_0219 PF02863 Arginine repressor, C-terminal domain C3B79_0220 PF03606 C4-dicarboxylate anaerobic carrier C3B79_0221 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C3B79_0221 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C3B79_0222 PF00696 Amino acid kinase family C3B79_0228 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_0228 PF00672 HAMP domain C3B79_0228 PF02743 Cache domain C3B79_0229 PF02653 Branched-chain amino acid transport system / permease component C3B79_0230 PF00005 ABC transporter C3B79_0231 PF13407 Periplasmic binding protein domain C3B79_0233 PF02837 Glycosyl hydrolases family 2, sugar binding domain C3B79_0233 PF00703 Glycosyl hydrolases family 2 C3B79_0233 PF16353 Domain of unknown function(DUF4981) C3B79_0233 PF02929 Beta galactosidase small chain C3B79_0233 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C3B79_0234 PF00356 Bacterial regulatory proteins, lacI family C3B79_0235 PF16363 GDP-mannose 4,6 dehydratase C3B79_0236 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain C3B79_0236 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain C3B79_0237 PF00288 GHMP kinases N terminal domain C3B79_0237 PF10509 Galactokinase galactose-binding signature C3B79_0237 PF08544 GHMP kinases C terminal C3B79_0238 PF01263 Aldose 1-epimerase C3B79_0239 PF00248 Aldo/keto reductase family C3B79_0240 PF02673 Bacitracin resistance protein BacA C3B79_0241 PF12973 ChrR Cupin-like domain C3B79_0242 PF04545 Sigma-70, region 4 C3B79_0242 PF04542 Sigma-70 region 2 C3B79_0244 PF03485 Arginyl tRNA synthetase N terminal domain C3B79_0244 PF05746 DALR anticodon binding domain C3B79_0244 PF00750 tRNA synthetases class I (R) C3B79_0246 PF00227 Proteasome subunit C3B79_0248 PF00004 ATPase family associated with various cellular activities (AAA) C3B79_0248 PF10431 C-terminal, D2-small domain, of ClpB protein C3B79_0248 PF07724 AAA domain (Cdc48 subfamily) C3B79_0250 PF07690 Major Facilitator Superfamily C3B79_0251 PF03466 LysR substrate binding domain C3B79_0251 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_0253 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C3B79_0253 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C3B79_0253 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3B79_0253 PF18267 Rubredoxin NAD+ reductase C-terminal domain C3B79_0253 PF04324 BFD-like [2Fe-2S] binding domain C3B79_0254 PF13806 Rieske-like [2Fe-2S] domain C3B79_0255 PF13806 Rieske-like [2Fe-2S] domain C3B79_0256 PF01226 Formate/nitrite transporter C3B79_0257 PF14824 Sirohaem biosynthesis protein central C3B79_0257 PF10414 Sirohaem synthase dimerisation region C3B79_0257 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3B79_0258 PF10414 Sirohaem synthase dimerisation region C3B79_0258 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3B79_0258 PF14824 Sirohaem biosynthesis protein central C3B79_0259 PF03448 MgtE intracellular N domain C3B79_0259 PF00571 CBS domain C3B79_0259 PF01769 Divalent cation transporter C3B79_0260 PF03448 MgtE intracellular N domain C3B79_0260 PF01769 Divalent cation transporter C3B79_0260 PF00571 CBS domain C3B79_0261 PF00672 HAMP domain C3B79_0261 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_0262 PF03737 Aldolase/RraA C3B79_0263 PF02592 Putative vitamin uptake transporter C3B79_0265 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C3B79_0266 PF00034 Cytochrome c C3B79_0267 PF00270 DEAD/DEAH box helicase C3B79_0267 PF00570 HRDC domain C3B79_0267 PF16124 RecQ zinc-binding C3B79_0267 PF09382 RQC domain C3B79_0267 PF00271 Helicase conserved C-terminal domain C3B79_0268 PF03061 Thioesterase superfamily C3B79_0271 PF03473 MOSC domain C3B79_0271 PF03475 3-alpha domain C3B79_0272 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_0273 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_0274 PF00005 ABC transporter C3B79_0274 PF08402 TOBE domain C3B79_0275 PF13416 Bacterial extracellular solute-binding protein C3B79_0276 PF13416 Bacterial extracellular solute-binding protein C3B79_0277 PF00202 Aminotransferase class-III C3B79_0279 PF00120 Glutamine synthetase, catalytic domain C3B79_0280 PF01258 Prokaryotic dksA/traR C4-type zinc finger C3B79_0283 PF05981 CreA protein C3B79_0284 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3B79_0284 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3B79_0285 PF00012 Hsp70 protein C3B79_0288 PF02903 Alpha amylase, N-terminal ig-like domain C3B79_0288 PF00128 Alpha amylase, catalytic domain C3B79_0289 PF02719 Polysaccharide biosynthesis protein C3B79_0290 PF02719 Polysaccharide biosynthesis protein C3B79_0291 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C3B79_0300 PF04055 Radical SAM superfamily C3B79_0300 PF02310 B12 binding domain C3B79_0301 PF16363 GDP-mannose 4,6 dehydratase C3B79_0302 PF03275 UDP-galactopyranose mutase C3B79_0303 PF03275 UDP-galactopyranose mutase C3B79_0304 PF00535 Glycosyl transferase family 2 C3B79_0307 PF00501 AMP-binding enzyme C3B79_0307 PF13193 AMP-binding enzyme C-terminal domain C3B79_0311 PF02348 Cytidylyltransferase C3B79_0313 PF08666 SAF domain C3B79_0313 PF03102 NeuB family C3B79_0318 PF16221 winged helix-turn-helix C3B79_0318 PF16254 Domain of unknown function (DUF4910) C3B79_0318 PF09940 Domain of unknown function (DUF2172) C3B79_0326 PF05958 tRNA (Uracil-5-)-methyltransferase C3B79_0327 PF00072 Response regulator receiver domain C3B79_0327 PF00486 Transcriptional regulatory protein, C terminal C3B79_0328 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_0328 PF00672 HAMP domain C3B79_0328 PF00512 His Kinase A (phospho-acceptor) domain C3B79_0330 PF03949 Malic enzyme, NAD binding domain C3B79_0330 PF00390 Malic enzyme, N-terminal domain C3B79_0332 PF11066 Protein of unknown function (DUF2867) C3B79_0332 PF13460 NAD(P)H-binding C3B79_0333 PF01197 Ribosomal protein L31 C3B79_0334 PF00270 DEAD/DEAH box helicase C3B79_0334 PF00271 Helicase conserved C-terminal domain C3B79_0334 PF17764 3′ DNA-binding domain (3′BD) C3B79_0334 PF18074 Primosomal protein N C-terminal domain C3B79_0334 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C3B79_0335 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C3B79_0335 PF18074 Primosomal protein N C-terminal domain C3B79_0335 PF17764 3′ DNA-binding domain (3′BD) C3B79_0335 PF00270 DEAD/DEAH box helicase C3B79_0335 PF00271 Helicase conserved C-terminal domain C3B79_0337 PF01389 OmpA-like transmembrane domain C3B79_0337 PF00691 OmpA family C3B79_0338 PF00291 Pyridoxal-phosphate dependent enzyme C3B79_0338 PF00585 C-terminal regulatory domain of Threonine dehydratase C3B79_0339 PF00291 Pyridoxal-phosphate dependent enzyme C3B79_0339 PF00585 C-terminal regulatory domain of Threonine dehydratase C3B79_0340 PF00920 Dehydratase family C3B79_0341 PF01063 Amino-transferase class IV C3B79_0343 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3B79_0343 PF00205 Thiamine pyrophosphate enzyme, central domain C3B79_0343 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3B79_0345 PF13335 Magnesium chelatase, subunit ChlI C-terminal C3B79_0345 PF01078 Magnesium chelatase, subunit ChlI C3B79_0346 PF01553 Acyltransferase C3B79_0347 PF01553 Acyltransferase C3B79_0349 PF00857 Isochorismatase family C3B79_0350 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C3B79_0350 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C3B79_0351 PF01323 DSBA-like thioredoxin domain C3B79_0352 PF01636 Phosphotransferase enzyme family C3B79_0353 PF13746 4Fe-4S dicluster domain C3B79_0353 PF12801 4Fe-4S binding domain C3B79_0353 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase C3B79_0354 PF06288 Protein of unknown function (DUF1040) C3B79_0355 PF01590 GAF domain C3B79_0355 PF00990 Diguanylate cyclase, GGDEF domain C3B79_0355 PF00360 Phytochrome region C3B79_0355 PF00563 EAL domain C3B79_0356 PF09278 MerR, DNA binding C3B79_0356 PF00376 MerR family regulatory protein C3B79_0357 PF00403 Heavy-metal-associated domain C3B79_0358 PF00156 Phosphoribosyl transferase domain C3B79_0359 PF01138 3' exoribonuclease family, domain 1 C3B79_0359 PF03725 3' exoribonuclease family, domain 2 C3B79_0360 PF08340 Domain of unknown function (DUF1732) C3B79_0360 PF03755 YicC-like family, N-terminal region C3B79_0363 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) C3B79_0367 PF01370 NAD dependent epimerase/dehydratase family C3B79_0368 PF00440 Bacterial regulatory proteins, tetR family C3B79_0368 PF08360 QacR-like protein, C-terminal region C3B79_0369 PF00155 Aminotransferase class I and II C3B79_0370 PF00107 Zinc-binding dehydrogenase C3B79_0370 PF08240 Alcohol dehydrogenase GroES-like domain C3B79_0371 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C3B79_0373 PF03707 Bacterial signalling protein N terminal repeat C3B79_0373 PF00990 Diguanylate cyclase, GGDEF domain C3B79_0373 PF00563 EAL domain C3B79_0374 PF00580 UvrD/REP helicase N-terminal domain C3B79_0374 PF13361 UvrD-like helicase C-terminal domain C3B79_0375 PF00266 Aminotransferase class-V C3B79_0376 PF02657 Fe-S metabolism associated domain C3B79_0377 PF00899 ThiF family C3B79_0385 PF01177 Asp/Glu/Hydantoin racemase C3B79_0386 PF07715 TonB-dependent Receptor Plug Domain C3B79_0386 PF00593 TonB dependent receptor C3B79_0387 PF03466 LysR substrate binding domain C3B79_0387 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_0390 PF00731 AIR carboxylase C3B79_0391 PF02222 ATP-grasp domain C3B79_0391 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C3B79_0392 PF07690 Major Facilitator Superfamily C3B79_0393 PF04397 LytTr DNA-binding domain C3B79_0393 PF00072 Response regulator receiver domain C3B79_0394 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_0394 PF07694 5TMR of 5TMR-LYT C3B79_0394 PF06580 Histidine kinase C3B79_0396 PF00072 Response regulator receiver domain C3B79_0396 PF00512 His Kinase A (phospho-acceptor) domain C3B79_0396 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3B79_0396 PF01627 Hpt domain C3B79_0396 PF00989 PAS fold C3B79_0396 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_0397 PF00072 Response regulator receiver domain C3B79_0397 PF00196 Bacterial regulatory proteins, luxR family C3B79_0398 PF16449 Fimbrillin MatB C3B79_0399 PF18649 EcpB C-terminal domain C3B79_0400 PF16967 E-set like domain C3B79_0400 PF15976 CS1-pili formation C-terminal C3B79_0403 PF01810 LysE type translocator C3B79_0404 PF07690 Major Facilitator Superfamily C3B79_0406 PF00210 Ferritin-like domain C3B79_0407 PF00990 Diguanylate cyclase, GGDEF domain C3B79_0407 PF08448 PAS fold C3B79_0408 PF07055 Enoyl reductase FAD binding domain C3B79_0408 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C3B79_0408 PF12241 Trans-2-enoyl-CoA reductase catalytic region C3B79_0409 PF00582 Universal stress protein family C3B79_0410 PF00579 tRNA synthetases class I (W and Y) C3B79_0411 PF03466 LysR substrate binding domain C3B79_0411 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_0415 PF00892 EamA-like transporter family C3B79_0418 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C3B79_0419 PF00625 Guanylate kinase C3B79_0420 PF01192 RNA polymerase Rpb6 C3B79_0421 PF13291 ACT domain C3B79_0421 PF04607 Region found in RelA / SpoT proteins C3B79_0421 PF02824 TGS domain C3B79_0422 PF12105 SpoU, rRNA methylase, C-terminal C3B79_0422 PF00588 SpoU rRNA Methylase family C3B79_0424 PF00132 Bacterial transferase hexapeptide (six repeats) C3B79_0425 PF12146 Serine aminopeptidase, S33 C3B79_0428 PF14532 Sigma-54 interaction domain C3B79_0428 PF00072 Response regulator receiver domain C3B79_0428 PF02954 Bacterial regulatory protein, Fis family C3B79_0429 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_0429 PF00512 His Kinase A (phospho-acceptor) domain C3B79_0429 PF00672 HAMP domain C3B79_0432 PF07690 Major Facilitator Superfamily C3B79_0433 PF02887 Pyruvate kinase, alpha/beta domain C3B79_0433 PF00224 Pyruvate kinase, barrel domain C3B79_0439 PF00440 Bacterial regulatory proteins, tetR family C3B79_0440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C3B79_0441 PF00873 AcrB/AcrD/AcrF family C3B79_0442 PF00873 AcrB/AcrD/AcrF family C3B79_0443 PF01627 Hpt domain C3B79_0443 PF17149 Periplasmic sensor domain found in signal transduction proteins C3B79_0443 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_0443 PF00072 Response regulator receiver domain C3B79_0443 PF00672 HAMP domain C3B79_0443 PF00512 His Kinase A (phospho-acceptor) domain C3B79_0444 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_0444 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3B79_0444 PF00512 His Kinase A (phospho-acceptor) domain C3B79_0445 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3B79_0445 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3B79_0446 PF03814 Potassium-transporting ATPase A subunit C3B79_0448 PF02669 K+-transporting ATPase, c chain C3B79_0449 PF00512 His Kinase A (phospho-acceptor) domain C3B79_0449 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_0449 PF13492 GAF domain C3B79_0449 PF02702 Osmosensitive K+ channel His kinase sensor domain C3B79_0449 PF13493 Domain of unknown function (DUF4118) C3B79_0450 PF00486 Transcriptional regulatory protein, C terminal C3B79_0450 PF00072 Response regulator receiver domain C3B79_0451 PF07690 Major Facilitator Superfamily C3B79_0453 PF00155 Aminotransferase class I and II C3B79_0454 PF00011 Hsp20/alpha crystallin family C3B79_0455 PF00011 Hsp20/alpha crystallin family C3B79_0456 PF13280 WYL domain C3B79_0456 PF08279 HTH domain C3B79_0458 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_0458 PF01751 Toprim domain C3B79_0458 PF00204 DNA gyrase B C3B79_0458 PF18053 DNA gyrase B subunit insert domain C3B79_0458 PF00986 DNA gyrase B subunit, carboxyl terminus C3B79_0459 PF02463 RecF/RecN/SMC N terminal domain C3B79_0460 PF00712 DNA polymerase III beta subunit, N-terminal domain C3B79_0460 PF02767 DNA polymerase III beta subunit, central domain C3B79_0460 PF02768 DNA polymerase III beta subunit, C-terminal domain C3B79_0461 PF11638 DnaA N-terminal domain C3B79_0461 PF08299 Bacterial dnaA protein helix-turn-helix C3B79_0461 PF00308 Bacterial dnaA protein C3B79_0464 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3B79_0465 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_0467 PF00468 Ribosomal protein L34 C3B79_0468 PF00825 Ribonuclease P C3B79_0469 PF02096 60Kd inner membrane protein C3B79_0469 PF14849 YidC periplasmic domain C3B79_0470 PF01926 50S ribosome-binding GTPase C3B79_0470 PF10396 GTP-binding protein TrmE N-terminus C3B79_0470 PF12631 MnmE helical domain C3B79_0471 PF01032 FecCD transport family C3B79_0473 PF00005 ABC transporter C3B79_0474 PF00005 ABC transporter C3B79_0475 PF00005 ABC transporter C3B79_0476 PF00593 TonB dependent receptor C3B79_0476 PF07715 TonB-dependent Receptor Plug Domain C3B79_0477 PF00258 Flavodoxin C3B79_0478 PF13932 GidA associated domain C3B79_0478 PF01134 Glucose inhibited division protein A C3B79_0479 PF02527 rRNA small subunit methyltransferase G C3B79_0480 PF13614 AAA domain C3B79_0481 PF17762 HTH domain found in ParB protein C3B79_0481 PF02195 ParB-like nuclease domain C3B79_0484 PF00119 ATP synthase A chain C3B79_0485 PF00137 ATP synthase subunit C C3B79_0486 PF00430 ATP synthase B/B' CF(0) C3B79_0487 PF00213 ATP synthase delta (OSCP) subunit C3B79_0488 PF00306 ATP synthase alpha/beta chain, C terminal domain C3B79_0488 PF02874 ATP synthase alpha/beta family, beta-barrel domain C3B79_0488 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3B79_0489 PF00231 ATP synthase C3B79_0490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3B79_0490 PF02874 ATP synthase alpha/beta family, beta-barrel domain C3B79_0491 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C3B79_0491 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C3B79_0492 PF12804 MobA-like NTP transferase domain C3B79_0492 PF14602 Hexapeptide repeat of succinyl-transferase C3B79_0492 PF00132 Bacterial transferase hexapeptide (six repeats) C3B79_0493 PF06123 Inner membrane protein CreD C3B79_0494 PF00905 Penicillin binding protein transpeptidase domain C3B79_0495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_0495 PF00512 His Kinase A (phospho-acceptor) domain C3B79_0495 PF00672 HAMP domain C3B79_0496 PF00512 His Kinase A (phospho-acceptor) domain C3B79_0496 PF00672 HAMP domain C3B79_0496 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_0497 PF00486 Transcriptional regulatory protein, C terminal C3B79_0497 PF00072 Response regulator receiver domain C3B79_0499 PF08220 DeoR-like helix-turn-helix domain C3B79_0499 PF00455 DeoR C terminal sensor domain C3B79_0500 PF01380 SIS domain C3B79_0501 PF03472 Autoinducer binding domain C3B79_0501 PF00196 Bacterial regulatory proteins, luxR family C3B79_0503 PF01618 MotA/TolQ/ExbB proton channel family C3B79_0504 PF01618 MotA/TolQ/ExbB proton channel family C3B79_0505 PF02472 Biopolymer transport protein ExbD/TolR C3B79_0506 PF03544 Gram-negative bacterial TonB protein C-terminal C3B79_0516 PF07969 Amidohydrolase family C3B79_0517 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C3B79_0518 PF01209 ubiE/COQ5 methyltransferase family C3B79_0519 PF02036 SCP-2 sterol transfer family C3B79_0520 PF03109 ABC1 family C3B79_0521 PF02416 mttA/Hcf106 family C3B79_0522 PF02416 mttA/Hcf106 family C3B79_0523 PF00902 Sec-independent protein translocase protein (TatC) C3B79_0524 PF01026 TatD related DNase C3B79_0525 PF00490 Delta-aminolevulinic acid dehydratase C3B79_0526 PF01432 Peptidase family M3 C3B79_0527 PF03707 Bacterial signalling protein N terminal repeat C3B79_0527 PF00563 EAL domain C3B79_0527 PF00990 Diguanylate cyclase, GGDEF domain C3B79_0528 PF04445 Putative SAM-dependent methyltransferase C3B79_0531 PF02541 Ppx/GppA phosphatase family C3B79_0532 PF00271 Helicase conserved C-terminal domain C3B79_0532 PF00270 DEAD/DEAH box helicase C3B79_0533 PF00085 Thioredoxin C3B79_0534 PF07498 Rho termination factor, N-terminal domain C3B79_0534 PF07497 Rho termination factor, RNA-binding domain C3B79_0534 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3B79_0536 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C3B79_0537 PF00175 Oxidoreductase NAD-binding domain C3B79_0538 PF04380 Membrane fusogenic activity C3B79_0539 PF12262 Bacterial virulence factor lipase N-terminal C3B79_0540 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease C3B79_0540 PF01694 Rhomboid family C3B79_0541 PF00581 Rhodanese-like domain C3B79_0544 PF00005 ABC transporter C3B79_0545 PF12399 Branched-chain amino acid ATP-binding cassette transporter C3B79_0545 PF00005 ABC transporter C3B79_0546 PF11862 Domain of unknown function (DUF3382) C3B79_0546 PF02653 Branched-chain amino acid transport system / permease component C3B79_0547 PF02653 Branched-chain amino acid transport system / permease component C3B79_0548 PF13458 Periplasmic binding protein C3B79_0549 PF00356 Bacterial regulatory proteins, lacI family C3B79_0550 PF02056 Family 4 glycosyl hydrolase C3B79_0550 PF11975 Family 4 glycosyl hydrolase C-terminal domain C3B79_0551 PF00367 phosphotransferase system, EIIB C3B79_0551 PF02378 Phosphotransferase system, EIIC C3B79_0553 PF00392 Bacterial regulatory proteins, gntR family C3B79_0553 PF07702 UTRA domain C3B79_0554 PF01590 GAF domain C3B79_0554 PF00158 Sigma-54 interaction domain C3B79_0555 PF00753 Metallo-beta-lactamase superfamily C3B79_0555 PF00301 Rubredoxin C3B79_0555 PF00258 Flavodoxin C3B79_0556 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3B79_0556 PF18113 Rubredoxin binding C-terminal domain C3B79_0558 PF12801 4Fe-4S binding domain C3B79_0559 PF03222 Tryptophan/tyrosine permease family C3B79_0565 PF01202 Shikimate kinase C3B79_0567 PF05746 DALR anticodon binding domain C3B79_0567 PF02092 Glycyl-tRNA synthetase beta subunit C3B79_0568 PF02091 Glycyl-tRNA synthetase alpha subunit C3B79_0569 PF02091 Glycyl-tRNA synthetase alpha subunit C3B79_0570 PF03352 Methyladenine glycosylase C3B79_0571 PF00672 HAMP domain C3B79_0571 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_0571 PF02743 Cache domain C3B79_0572 PF00691 OmpA family C3B79_0572 PF13488 Glycine zipper C3B79_0573 PF01042 Endoribonuclease L-PSP C3B79_0574 PF01206 Sulfurtransferase TusA C3B79_0576 PF01547 Bacterial extracellular solute-binding protein C3B79_0577 PF01547 Bacterial extracellular solute-binding protein C3B79_0578 PF00672 HAMP domain C3B79_0578 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_0578 PF00512 His Kinase A (phospho-acceptor) domain C3B79_0579 PF00486 Transcriptional regulatory protein, C terminal C3B79_0579 PF00072 Response regulator receiver domain C3B79_0580 PF00108 Thiolase, N-terminal domain C3B79_0580 PF02803 Thiolase, C-terminal domain C3B79_0581 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C3B79_0581 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C3B79_0581 PF00378 Enoyl-CoA hydratase/isomerase C3B79_0582 PF13193 AMP-binding enzyme C-terminal domain C3B79_0582 PF00501 AMP-binding enzyme C3B79_0584 PF00557 Metallopeptidase family M24 C3B79_0585 PF09186 Domain of unknown function (DUF1949) C3B79_0585 PF01205 Uncharacterized protein family UPF0029 C3B79_0586 PF02386 Cation transport protein C3B79_0587 PF12724 Flavodoxin domain C3B79_0593 PF13607 Succinyl-CoA ligase like flavodoxin domain C3B79_0593 PF13380 CoA binding domain C3B79_0593 PF00583 Acetyltransferase (GNAT) family C3B79_0596 PF03466 LysR substrate binding domain C3B79_0596 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_0598 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C3B79_0598 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C3B79_0599 PF00342 Phosphoglucose isomerase C3B79_0602 PF05552 Conserved TM helix C3B79_0602 PF00924 Mechanosensitive ion channel C3B79_0604 PF00440 Bacterial regulatory proteins, tetR family C3B79_0605 PF00692 dUTPase C3B79_0606 PF04127 DNA / pantothenate metabolism flavoprotein C3B79_0606 PF02441 Flavoprotein C3B79_0607 PF04002 RadC-like JAB domain C3B79_0608 PF00471 Ribosomal protein L33 C3B79_0610 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C3B79_0610 PF06827 Zinc finger found in FPG and IleRS C3B79_0610 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C3B79_0611 PF04393 Protein of unknown function (DUF535) C3B79_0612 PF01467 Cytidylyltransferase-like C3B79_0613 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C3B79_0614 PF00535 Glycosyl transferase family 2 C3B79_0616 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C3B79_0617 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C3B79_0618 PF03611 PTS system sugar-specific permease component C3B79_0620 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3B79_0621 PF00356 Bacterial regulatory proteins, lacI family C3B79_0621 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C3B79_0622 PF00107 Zinc-binding dehydrogenase C3B79_0622 PF08240 Alcohol dehydrogenase GroES-like domain C3B79_0626 PF03748 Flagellar basal body-associated protein FliL C3B79_0627 PF04345 Chorismate lyase C3B79_0628 PF01040 UbiA prenyltransferase family C3B79_0629 PF01553 Acyltransferase C3B79_0631 PF00717 Peptidase S24-like C3B79_0631 PF01726 LexA DNA binding domain C3B79_0634 PF02630 SCO1/SenC C3B79_0635 PF01554 MatE C3B79_0636 PF00588 SpoU rRNA Methylase family C3B79_0637 PF00512 His Kinase A (phospho-acceptor) domain C3B79_0637 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_0637 PF00672 HAMP domain C3B79_0637 PF16527 Two-component sensor protein CpxA, periplasmic domain C3B79_0638 PF00486 Transcriptional regulatory protein, C terminal C3B79_0638 PF00072 Response regulator receiver domain C3B79_0639 PF16916 Dimerisation domain of Zinc Transporter C3B79_0639 PF01545 Cation efflux family C3B79_0640 PF06426 Serine acetyltransferase, N-terminal C3B79_0640 PF00132 Bacterial transferase hexapeptide (six repeats) C3B79_0642 PF06005 Cell division protein ZapB C3B79_0645 PF01612 3'-5' exonuclease C3B79_0645 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C3B79_0645 PF01367 5'-3' exonuclease, C-terminal SAM fold C3B79_0645 PF00476 DNA polymerase family A C3B79_0646 PF00132 Bacterial transferase hexapeptide (six repeats) C3B79_0657 PF00356 Bacterial regulatory proteins, lacI family C3B79_0658 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C3B79_0658 PF00703 Glycosyl hydrolases family 2 C3B79_0658 PF02837 Glycosyl hydrolases family 2, sugar binding domain C3B79_0658 PF02929 Beta galactosidase small chain C3B79_0658 PF16353 Domain of unknown function(DUF4981) C3B79_0659 PF04074 YhcH/YjgK/YiaL C3B79_0660 PF13520 Amino acid permease C3B79_0661 PF01588 Putative tRNA binding domain C3B79_0662 PF13520 Amino acid permease C3B79_0663 PF13593 SBF-like CPA transporter family (DUF4137) C3B79_0664 PF03781 Sulfatase-modifying factor enzyme 1 C3B79_0664 PF12867 DinB superfamily C3B79_0666 PF00756 Putative esterase C3B79_0667 PF08240 Alcohol dehydrogenase GroES-like domain C3B79_0667 PF00107 Zinc-binding dehydrogenase C3B79_0668 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_0668 PF03466 LysR substrate binding domain C3B79_0674 PF00580 UvrD/REP helicase N-terminal domain C3B79_0674 PF13361 UvrD-like helicase C-terminal domain C3B79_0678 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_0678 PF03466 LysR substrate binding domain C3B79_0686 PF06206 CpeT/CpcT family (DUF1001) C3B79_0688 PF01810 LysE type translocator C3B79_0691 PF04143 Sulphur transport C3B79_0692 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_0692 PF00672 HAMP domain C3B79_0692 PF17200 Single Cache domain 2 C3B79_0694 PF00689 Cation transporting ATPase, C-terminus C3B79_0694 PF00690 Cation transporter/ATPase, N-terminus C3B79_0695 PF01810 LysE type translocator C3B79_0696 PF12833 Helix-turn-helix domain C3B79_0697 PF00892 EamA-like transporter family C3B79_0699 PF00171 Aldehyde dehydrogenase family C3B79_0700 PF07883 Cupin domain C3B79_0700 PF01381 Helix-turn-helix C3B79_0701 PF00202 Aminotransferase class-III C3B79_0702 PF00171 Aldehyde dehydrogenase family C3B79_0703 PF00117 Glutamine amidotransferase class-I C3B79_0703 PF02540 NAD synthase C3B79_0703 PF00958 GMP synthase C terminal domain C3B79_0704 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C3B79_0704 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C3B79_0705 PF00294 pfkB family carbohydrate kinase C3B79_0706 PF02082 Transcriptional regulator C3B79_0709 PF02646 RmuC family C3B79_0710 PF02386 Cation transport protein C3B79_0711 PF02080 TrkA-C domain C3B79_0711 PF02254 TrkA-N domain C3B79_0712 PF01029 NusB family C3B79_0712 PF01189 16S rRNA methyltransferase RsmB/F C3B79_0713 PF02911 Formyl transferase, C-terminal domain C3B79_0713 PF00551 Formyl transferase C3B79_0714 PF01327 Polypeptide deformylase C3B79_0716 PF17782 DprA winged helix domain C3B79_0716 PF02481 DNA recombination-mediator protein A C3B79_0717 PF04361 Protein of unknown function (DUF494) C3B79_0718 PF01396 Topoisomerase DNA binding C4 zinc finger C3B79_0719 PF00731 AIR carboxylase C3B79_0720 PF01300 Telomere recombination C3B79_0721 PF01218 Coproporphyrinogen III oxidase C3B79_0722 PF08501 Shikimate dehydrogenase substrate binding domain C3B79_0722 PF01488 Shikimate / quinate 5-dehydrogenase C3B79_0722 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C3B79_0723 PF07369 Protein of unknown function (DUF1488) C3B79_0726 PF01926 50S ribosome-binding GTPase C3B79_0727 PF00034 Cytochrome c C3B79_0728 PF04220 Der GTPase activator (YihI) C3B79_0729 PF10675 Protein of unknown function (DUF2489) C3B79_0730 PF04055 Radical SAM superfamily C3B79_0730 PF06969 HemN C-terminal domain C3B79_0731 PF00962 Adenosine/AMP deaminase C3B79_0733 PF00072 Response regulator receiver domain C3B79_0733 PF02954 Bacterial regulatory protein, Fis family C3B79_0733 PF00158 Sigma-54 interaction domain C3B79_0734 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_0734 PF00512 His Kinase A (phospho-acceptor) domain C3B79_0734 PF00989 PAS fold C3B79_0736 PF03951 Glutamine synthetase, beta-Grasp domain C3B79_0736 PF00120 Glutamine synthetase, catalytic domain C3B79_0738 PF03631 Virulence factor BrkB C3B79_0739 PF03631 Virulence factor BrkB C3B79_0740 PF02580 D-Tyr-tRNA(Tyr) deacylase C3B79_0741 PF02580 D-Tyr-tRNA(Tyr) deacylase C3B79_0743 PF00583 Acetyltransferase (GNAT) family C3B79_0743 PF09500 Putative thioesterase (yiiD_Cterm) C3B79_0745 PF17191 RecG wedge domain C3B79_0745 PF00270 DEAD/DEAH box helicase C3B79_0745 PF00271 Helicase conserved C-terminal domain C3B79_0746 PF13091 PLD-like domain C3B79_0747 PF02447 GntP family permease C3B79_0748 PF01202 Shikimate kinase C3B79_0749 PF00920 Dehydratase family C3B79_0750 PF01081 KDPG and KHG aldolase C3B79_0751 PF00356 Bacterial regulatory proteins, lacI family C3B79_0751 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C3B79_0754 PF01551 Peptidase family M23 C3B79_0755 PF01676 Metalloenzyme superfamily C3B79_0755 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C3B79_0756 PF00581 Rhodanese-like domain C3B79_0757 PF02556 Preprotein translocase subunit SecB C3B79_0758 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C3B79_0758 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C3B79_0759 PF01521 Iron-sulphur cluster biosynthesis C3B79_0759 PF01106 NifU-like domain C3B79_0760 PF00156 Phosphoribosyl transferase domain C3B79_0761 PF00561 alpha/beta hydrolase fold C3B79_0765 PF16921 Tex protein YqgF-like domain C3B79_0765 PF09371 Tex-like protein N-terminal domain C3B79_0765 PF17674 HHH domain C3B79_0765 PF00575 S1 RNA binding domain C3B79_0766 PF03449 Transcription elongation factor, N-terminal C3B79_0766 PF01272 Transcription elongation factor, GreA/GreB, C-term C3B79_0767 PF00486 Transcriptional regulatory protein, C terminal C3B79_0767 PF00072 Response regulator receiver domain C3B79_0768 PF00512 His Kinase A (phospho-acceptor) domain C3B79_0768 PF00672 HAMP domain C3B79_0768 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_0771 PF00338 Ribosomal protein S10p/S20e C3B79_0773 PF00297 Ribosomal protein L3 C3B79_0774 PF00573 Ribosomal protein L4/L1 family C3B79_0775 PF00276 Ribosomal protein L23 C3B79_0776 PF03947 Ribosomal Proteins L2, C-terminal domain C3B79_0776 PF00181 Ribosomal Proteins L2, RNA binding domain C3B79_0777 PF00203 Ribosomal protein S19 C3B79_0779 PF07650 KH domain C3B79_0779 PF00189 Ribosomal protein S3, C-terminal domain C3B79_0780 PF00252 Ribosomal protein L16p/L10e C3B79_0781 PF00831 Ribosomal L29 protein C3B79_0782 PF00366 Ribosomal protein S17 C3B79_0783 PF00238 Ribosomal protein L14p/L23e C3B79_0784 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C3B79_0784 PF00467 KOW motif C3B79_0785 PF00281 Ribosomal protein L5 C3B79_0785 PF00673 ribosomal L5P family C-terminus C3B79_0786 PF00253 Ribosomal protein S14p/S29e C3B79_0787 PF00410 Ribosomal protein S8 C3B79_0788 PF00347 Ribosomal protein L6 C3B79_0789 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C3B79_0790 PF00333 Ribosomal protein S5, N-terminal domain C3B79_0790 PF03719 Ribosomal protein S5, C-terminal domain C3B79_0791 PF00327 Ribosomal protein L30p/L7e C3B79_0792 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C3B79_0793 PF00344 SecY translocase C3B79_0794 PF00416 Ribosomal protein S13/S18 C3B79_0795 PF01479 S4 domain C3B79_0795 PF00163 Ribosomal protein S4/S9 N-terminal domain C3B79_0796 PF01000 RNA polymerase Rpb3/RpoA insert domain C3B79_0796 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C3B79_0796 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C3B79_0797 PF01196 Ribosomal protein L17 C3B79_0807 PF02254 TrkA-N domain C3B79_0807 PF00999 Sodium/hydrogen exchanger family C3B79_0808 PF02525 Flavodoxin-like fold C3B79_0810 PF00106 short chain dehydrogenase C3B79_0813 PF00326 Prolyl oligopeptidase family C3B79_0813 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C3B79_0817 PF07947 YhhN family C3B79_0818 PF07690 Major Facilitator Superfamily C3B79_0819 PF13533 Biotin-lipoyl like C3B79_0820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_0820 PF03466 LysR substrate binding domain C3B79_0822 PF00375 Sodium:dicarboxylate symporter family C3B79_0823 PF10678 Protein of unknown function (DUF2492) C3B79_0824 PF01914 MarC family integral membrane protein C3B79_0825 PF03466 LysR substrate binding domain C3B79_0825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_0826 PF02416 mttA/Hcf106 family C3B79_0829 PF01464 Transglycosylase SLT domain C3B79_0831 PF13091 PLD-like domain C3B79_0833 PF00440 Bacterial regulatory proteins, tetR family C3B79_0834 PF07226 Protein of unknown function (DUF1422) C3B79_0837 PF02881 SRP54-type protein, helical bundle domain C3B79_0837 PF00448 SRP54-type protein, GTPase domain C3B79_0838 PF00005 ABC transporter C3B79_0839 PF18075 FtsX extracellular domain C3B79_0840 PF04545 Sigma-70, region 4 C3B79_0840 PF04542 Sigma-70 region 2 C3B79_0840 PF00140 Sigma-70 factor, region 1.2 C3B79_0841 PF00484 Carbonic anhydrase C3B79_0842 PF00392 Bacterial regulatory proteins, gntR family C3B79_0842 PF07702 UTRA domain C3B79_0843 PF01979 Amidohydrolase family C3B79_0844 PF00491 Arginase family C3B79_0845 PF17392 Urocanase C-terminal domain C3B79_0845 PF17391 Urocanase N-terminal domain C3B79_0845 PF01175 Urocanase Rossmann-like domain C3B79_0846 PF00221 Aromatic amino acid lyase C3B79_0847 PF01699 Sodium/calcium exchanger protein C3B79_0848 PF01699 Sodium/calcium exchanger protein C3B79_0849 PF12792 CSS motif domain associated with EAL C3B79_0849 PF00563 EAL domain C3B79_0851 PF17157 Gammaproteobacterial periplasmic sensor domain C3B79_0851 PF00563 EAL domain C3B79_0851 PF00990 Diguanylate cyclase, GGDEF domain C3B79_0856 PF03958 Bacterial type II/III secretion system short domain C3B79_0856 PF00263 Bacterial type II and III secretion system protein C3B79_0859 PF00437 Type II/IV secretion system protein C3B79_0859 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C3B79_0860 PF00482 Type II secretion system (T2SS), protein F C3B79_0863 PF07963 Prokaryotic N-terminal methylation motif C3B79_0863 PF08334 Type II secretion system (T2SS), protein G C3B79_0864 PF07963 Prokaryotic N-terminal methylation motif C3B79_0864 PF14245 Type IV pilin PilA C3B79_0870 PF04085 rod shape-determining protein MreC C3B79_0871 PF04093 rod shape-determining protein MreD C3B79_0872 PF02545 Maf-like protein C3B79_0873 PF00575 S1 RNA binding domain C3B79_0873 PF10150 Ribonuclease E/G family C3B79_0875 PF13502 AsmA-like C-terminal region C3B79_0875 PF13116 Protein of unknown function C3B79_0877 PF00795 Carbon-nitrogen hydrolase C3B79_0878 PF01523 Putative modulator of DNA gyrase C3B79_0879 PF01418 Helix-turn-helix domain, rpiR family C3B79_0879 PF01380 SIS domain C3B79_0883 PF00367 phosphotransferase system, EIIB C3B79_0883 PF02378 Phosphotransferase system, EIIC C3B79_0884 PF13580 SIS domain C3B79_0887 PF01914 MarC family integral membrane protein C3B79_0888 PF07690 Major Facilitator Superfamily C3B79_0890 PF00072 Response regulator receiver domain C3B79_0892 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_0892 PF00512 His Kinase A (phospho-acceptor) domain C3B79_0892 PF01627 Hpt domain C3B79_0892 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C3B79_0892 PF00672 HAMP domain C3B79_0892 PF00072 Response regulator receiver domain C3B79_0893 PF13581 Histidine kinase-like ATPase domain C3B79_0894 PF01740 STAS domain C3B79_0894 PF08678 Rsbr N terminal C3B79_0895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_0895 PF08447 PAS fold C3B79_0895 PF13426 PAS domain C3B79_0898 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) C3B79_0899 PF04228 Putative neutral zinc metallopeptidase C3B79_0903 PF08668 HDOD domain C3B79_0906 PF00999 Sodium/hydrogen exchanger family C3B79_0907 PF02607 B12 binding domain C3B79_0907 PF02310 B12 binding domain C3B79_0907 PF02965 Vitamin B12 dependent methionine synthase, activation domain C3B79_0907 PF00809 Pterin binding enzyme C3B79_0907 PF02574 Homocysteine S-methyltransferase C3B79_0908 PF18030 RimK PreATP-grasp domain C3B79_0908 PF08443 RimK-like ATP-grasp domain C3B79_0909 PF05525 Branched-chain amino acid transport protein C3B79_0910 PF05525 Branched-chain amino acid transport protein C3B79_0912 PF00486 Transcriptional regulatory protein, C terminal C3B79_0912 PF00072 Response regulator receiver domain C3B79_0915 PF03440 Aerolysin/Pertussis toxin (APT) domain C3B79_0915 PF01117 Aerolysin toxin C3B79_0916 PF01964 Radical SAM ThiC family C3B79_0916 PF13667 ThiC-associated domain C3B79_0917 PF02581 Thiamine monophosphate synthase C3B79_0918 PF00899 ThiF family C3B79_0920 PF05690 Thiazole biosynthesis protein ThiG C3B79_0921 PF04055 Radical SAM superfamily C3B79_0921 PF06968 Biotin and Thiamin Synthesis associated domain C3B79_0927 PF13036 Peptidoglycan-synthase activator LpoB C3B79_0930 PF00990 Diguanylate cyclase, GGDEF domain C3B79_0930 PF17151 Periplasmic sensor domain C3B79_0933 PF03222 Tryptophan/tyrosine permease family C3B79_0934 PF06055 Exopolysaccharide synthesis, ExoD C3B79_0937 PF08803 Putative mono-oxygenase ydhR C3B79_0938 PF01638 HxlR-like helix-turn-helix C3B79_0943 PF00593 TonB dependent receptor C3B79_0943 PF07715 TonB-dependent Receptor Plug Domain C3B79_0946 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded C3B79_0947 PF03692 Putative zinc- or iron-chelating domain C3B79_0949 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase C3B79_0950 PF02602 Uroporphyrinogen-III synthase HemD C3B79_0951 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C3B79_0951 PF03900 Porphobilinogen deaminase, C-terminal domain C3B79_0953 PF01295 Adenylate cyclase, class-I C3B79_0953 PF12633 Adenylate cyclase NT domain C3B79_0954 PF02230 Phospholipase/Carboxylesterase C3B79_0955 PF01491 Frataxin-like domain C3B79_0956 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C3B79_0956 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C3B79_0957 PF01678 Diaminopimelate epimerase C3B79_0959 PF00589 Phage integrase family C3B79_0959 PF02899 Phage integrase, N-terminal SAM-like domain C3B79_0960 PF13419 Haloacid dehalogenase-like hydrolase C3B79_0962 PF13545 Crp-like helix-turn-helix domain C3B79_0962 PF00027 Cyclic nucleotide-binding domain C3B79_0964 PF07722 Peptidase C26 C3B79_0968 PF00005 ABC transporter C3B79_0971 PF02464 Competence-damaged protein C3B79_0971 PF00994 Probable molybdopterin binding domain C3B79_0972 PF01966 HD domain C3B79_0972 PF12072 Domain of unknown function (DUF3552) C3B79_0972 PF00013 KH domain C3B79_0973 PF04204 Homoserine O-succinyltransferase C3B79_0975 PF01037 Lrp/AsnC ligand binding domain C3B79_0976 PF00884 Sulfatase C3B79_0980 PF00128 Alpha amylase, catalytic domain C3B79_0980 PF16657 Maltogenic Amylase, C-terminal domain C3B79_0980 PF02903 Alpha amylase, N-terminal ig-like domain C3B79_0982 PF02308 MgtC family C3B79_0987 PF00106 short chain dehydrogenase C3B79_0989 PF03577 Peptidase family C69 C3B79_0990 PF03577 Peptidase family C69 C3B79_0993 PF00465 Iron-containing alcohol dehydrogenase C3B79_0994 PF00465 Iron-containing alcohol dehydrogenase C3B79_0997 PF01053 Cys/Met metabolism PLP-dependent enzyme C3B79_0999 PF12793 Sugar transport-related sRNA regulator N-term C3B79_0999 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3B79_1000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3B79_1000 PF12793 Sugar transport-related sRNA regulator N-term C3B79_1003 PF03280 Proteobacterial lipase chaperone protein C3B79_1004 PF00561 alpha/beta hydrolase fold C3B79_1007 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C3B79_1007 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C3B79_1008 PF02698 DUF218 domain C3B79_1009 PF01752 Collagenase C3B79_1009 PF08453 Peptidase family M9 N-terminal C3B79_1012 PF00419 Fimbrial protein C3B79_1014 PF13953 PapC C-terminal domain C3B79_1014 PF13954 PapC N-terminal domain C3B79_1014 PF00577 Outer membrane usher protein C3B79_1015 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain C3B79_1015 PF02753 Pili assembly chaperone PapD, C-terminal domain C3B79_1016 PF00419 Fimbrial protein C3B79_1017 PF00419 Fimbrial protein C3B79_1019 PF00501 AMP-binding enzyme C3B79_1019 PF13193 AMP-binding enzyme C-terminal domain C3B79_1020 PF13378 Enolase C-terminal domain-like C3B79_1021 PF00378 Enoyl-CoA hydratase/isomerase C3B79_1022 PF12697 Alpha/beta hydrolase family C3B79_1023 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3B79_1023 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3B79_1023 PF16582 Middle domain of thiamine pyrophosphate C3B79_1025 PF00425 chorismate binding enzyme C3B79_1027 PF01040 UbiA prenyltransferase family C3B79_1034 PF03880 DbpA RNA binding domain C3B79_1034 PF00270 DEAD/DEAH box helicase C3B79_1034 PF00271 Helicase conserved C-terminal domain C3B79_1035 PF07662 Na+ dependent nucleoside transporter C-terminus C3B79_1035 PF01773 Na+ dependent nucleoside transporter N-terminus C3B79_1035 PF07670 Nucleoside recognition C3B79_1036 PF04307 LexA-binding, inner membrane-associated putative hydrolase C3B79_1039 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C3B79_1040 PF01544 CorA-like Mg2+ transporter protein C3B79_1044 PF00999 Sodium/hydrogen exchanger family C3B79_1044 PF02080 TrkA-C domain C3B79_1044 PF03471 Transporter associated domain C3B79_1045 PF05068 Mannitol repressor C3B79_1046 PF08125 Mannitol dehydrogenase C-terminal domain C3B79_1046 PF01232 Mannitol dehydrogenase Rossmann domain C3B79_1047 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3B79_1047 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3B79_1047 PF02378 Phosphotransferase system, EIIC C3B79_1050 PF00440 Bacterial regulatory proteins, tetR family C3B79_1051 PF08206 Ribonuclease B OB domain C3B79_1051 PF00773 RNB domain C3B79_1051 PF17876 Cold shock domain C3B79_1052 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_1052 PF03466 LysR substrate binding domain C3B79_1053 PF00765 Autoinducer synthase C3B79_1054 PF00196 Bacterial regulatory proteins, luxR family C3B79_1054 PF03472 Autoinducer binding domain C3B79_1055 PF01810 LysE type translocator C3B79_1056 PF00149 Calcineurin-like phosphoesterase C3B79_1056 PF02872 5'-nucleotidase, C-terminal domain C3B79_1057 PF05433 Glycine zipper 2TM domain C3B79_1058 PF00583 Acetyltransferase (GNAT) family C3B79_1059 PF11756 Nitrous oxide-stimulated promoter C3B79_1060 PF01321 Creatinase/Prolidase N-terminal domain C3B79_1060 PF00557 Metallopeptidase family M24 C3B79_1061 PF00392 Bacterial regulatory proteins, gntR family C3B79_1063 PF01430 Hsp33 protein C3B79_1064 PF01479 S4 domain C3B79_1065 PF11356 Type II secretion system protein C C3B79_1066 PF00263 Bacterial type II and III secretion system protein C3B79_1066 PF03958 Bacterial type II/III secretion system short domain C3B79_1067 PF03958 Bacterial type II/III secretion system short domain C3B79_1067 PF00263 Bacterial type II and III secretion system protein C3B79_1068 PF00437 Type II/IV secretion system protein C3B79_1069 PF00482 Type II secretion system (T2SS), protein F C3B79_1070 PF07963 Prokaryotic N-terminal methylation motif C3B79_1070 PF08334 Type II secretion system (T2SS), protein G C3B79_1072 PF12019 Type II transport protein GspH C3B79_1072 PF07963 Prokaryotic N-terminal methylation motif C3B79_1073 PF07963 Prokaryotic N-terminal methylation motif C3B79_1073 PF02501 Type II secretion system (T2SS), protein I C3B79_1074 PF07963 Prokaryotic N-terminal methylation motif C3B79_1074 PF11612 Type II secretion system (T2SS), protein J C3B79_1075 PF11612 Type II secretion system (T2SS), protein J C3B79_1075 PF07963 Prokaryotic N-terminal methylation motif C3B79_1076 PF03934 Type II secretion system (T2SS), protein K C3B79_1077 PF05134 Type II secretion system (T2SS), protein L C3B79_1077 PF12693 GspL periplasmic domain C3B79_1078 PF04612 Type II secretion system (T2SS), protein M C3B79_1079 PF01203 Type II secretion system (T2SS), protein N C3B79_1080 PF00196 Bacterial regulatory proteins, luxR family C3B79_1081 PF00579 tRNA synthetases class I (W and Y) C3B79_1081 PF01479 S4 domain C3B79_1082 PF13419 Haloacid dehalogenase-like hydrolase C3B79_1083 PF00293 NUDIX domain C3B79_1084 PF00459 Inositol monophosphatase family C3B79_1085 PF03222 Tryptophan/tyrosine permease family C3B79_1086 PF01588 Putative tRNA binding domain C3B79_1087 PF12833 Helix-turn-helix domain C3B79_1087 PF06445 GyrI-like small molecule binding domain C3B79_1088 PF01340 Met Apo-repressor, MetJ C3B79_1089 PF01053 Cys/Met metabolism PLP-dependent enzyme C3B79_1090 PF03447 Homoserine dehydrogenase, NAD binding domain C3B79_1090 PF00696 Amino acid kinase family C3B79_1090 PF00742 Homoserine dehydrogenase C3B79_1093 PF13817 IS66 C-terminal element C3B79_1093 PF13005 zinc-finger binding domain of transposase IS66 C3B79_1093 PF03050 Transposase IS66 family C3B79_1093 PF13007 Transposase C of IS166 homeodomain C3B79_1094 PF05717 IS66 Orf2 like protein C3B79_1096 PF01734 Patatin-like phospholipase C3B79_1097 PF00311 Phosphoenolpyruvate carboxylase C3B79_1098 PF07687 Peptidase dimerisation domain C3B79_1098 PF01546 Peptidase family M20/M25/M40 C3B79_1100 PF01118 Semialdehyde dehydrogenase, NAD binding domain C3B79_1100 PF02774 Semialdehyde dehydrogenase, dimerisation domain C3B79_1101 PF00696 Amino acid kinase family C3B79_1102 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C3B79_1102 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C3B79_1103 PF00764 Arginosuccinate synthase C3B79_1104 PF00206 Lyase C3B79_1104 PF14698 Argininosuccinate lyase C-terminal C3B79_1110 PF12464 Maltose acetyltransferase C3B79_1110 PF14602 Hexapeptide repeat of succinyl-transferase C3B79_1111 PF13194 Domain of unknown function (DUF4010) C3B79_1114 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_1115 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_1116 PF12857 TOBE-like domain C3B79_1116 PF00005 ABC transporter C3B79_1117 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_1117 PF03466 LysR substrate binding domain C3B79_1118 PF18416 N-acetylglucosamine binding protein domain 2 C3B79_1118 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading C3B79_1119 PF00672 HAMP domain C3B79_1119 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_1119 PF17200 Single Cache domain 2 C3B79_1128 PF14684 Tricorn protease C1 domain C3B79_1128 PF14685 Tricorn protease PDZ domain C3B79_1128 PF03572 Peptidase family S41 C3B79_1128 PF07676 WD40-like Beta Propeller Repeat C3B79_1132 PF11230 Protein of unknown function (DUF3029) C3B79_1133 PF04055 Radical SAM superfamily C3B79_1135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_1135 PF03466 LysR substrate binding domain C3B79_1136 PF00155 Aminotransferase class I and II C3B79_1137 PF00155 Aminotransferase class I and II C3B79_1138 PF02583 Metal-sensitive transcriptional repressor C3B79_1141 PF17967 Pullulanase N2 domain C3B79_1141 PF18494 Pullulanase Ins domain C3B79_1141 PF03714 Bacterial pullanase-associated domain C3B79_1141 PF11852 Domain of unknown function (DUF3372) C3B79_1141 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C3B79_1142 PF00403 Heavy-metal-associated domain C3B79_1144 PF08534 Redoxin C3B79_1146 PF00270 DEAD/DEAH box helicase C3B79_1146 PF00271 Helicase conserved C-terminal domain C3B79_1149 PF03372 Endonuclease/Exonuclease/phosphatase family C3B79_1150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_1150 PF08447 PAS fold C3B79_1153 PF06062 Uncharacterised protein family (UPF0231) C3B79_1155 PF13556 PucR C-terminal helix-turn-helix domain C3B79_1155 PF17853 GGDEF-like domain C3B79_1155 PF05651 Putative sugar diacid recognition C3B79_1156 PF02447 GntP family permease C3B79_1157 PF02595 Glycerate kinase family C3B79_1159 PF00255 Glutathione peroxidase C3B79_1160 PF03466 LysR substrate binding domain C3B79_1160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_1161 PF01773 Na+ dependent nucleoside transporter N-terminus C3B79_1161 PF07670 Nucleoside recognition C3B79_1161 PF07662 Na+ dependent nucleoside transporter C-terminus C3B79_1162 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C3B79_1162 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C3B79_1163 PF00472 RF-1 domain C3B79_1164 PF00543 Nitrogen regulatory protein P-II C3B79_1165 PF13416 Bacterial extracellular solute-binding protein C3B79_1167 PF08402 TOBE domain C3B79_1167 PF00005 ABC transporter C3B79_1168 PF04261 Dyp-type peroxidase family C3B79_1169 PF01316 Arginine repressor, DNA binding domain C3B79_1169 PF02863 Arginine repressor, C-terminal domain C3B79_1171 PF00005 ABC transporter C3B79_1172 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3B79_1173 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_1174 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_1175 PF00056 lactate/malate dehydrogenase, NAD binding domain C3B79_1175 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C3B79_1176 PF08238 Sel1 repeat C3B79_1177 PF00970 Oxidoreductase FAD-binding domain C3B79_1177 PF00042 Globin C3B79_1177 PF00175 Oxidoreductase NAD-binding domain C3B79_1178 PF02082 Transcriptional regulator C3B79_1179 PF01595 Cyclin M transmembrane N-terminal domain C3B79_1179 PF03471 Transporter associated domain C3B79_1179 PF00571 CBS domain C3B79_1180 PF01578 Cytochrome C assembly protein C3B79_1181 PF02978 Signal peptide binding domain C3B79_1181 PF02881 SRP54-type protein, helical bundle domain C3B79_1181 PF00448 SRP54-type protein, GTPase domain C3B79_1182 PF00886 Ribosomal protein S16 C3B79_1183 PF01782 RimM N-terminal domain C3B79_1183 PF05239 PRC-barrel domain C3B79_1184 PF01746 tRNA (Guanine-1)-methyltransferase C3B79_1185 PF01245 Ribosomal protein L19 C3B79_1187 PF02976 DNA mismatch repair enzyme MutH C3B79_1189 PF00293 NUDIX domain C3B79_1190 PF00391 PEP-utilising enzyme, mobile domain C3B79_1190 PF02896 PEP-utilising enzyme, TIM barrel domain C3B79_1190 PF05524 PEP-utilising enzyme, N-terminal C3B79_1190 PF01590 GAF domain C3B79_1191 PF01790 Prolipoprotein diacylglyceryl transferase C3B79_1192 PF00303 Thymidylate synthase C3B79_1193 PF06965 Na+/H+ antiporter 1 C3B79_1195 PF03466 LysR substrate binding domain C3B79_1195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_1196 PF01022 Bacterial regulatory protein, arsR family C3B79_1197 PF01649 Ribosomal protein S20 C3B79_1198 PF03023 Lipid II flippase MurJ C3B79_1199 PF06574 FAD synthetase C3B79_1199 PF01687 Riboflavin kinase C3B79_1200 PF06827 Zinc finger found in FPG and IleRS C3B79_1200 PF00133 tRNA synthetases class I (I, L, M and V) C3B79_1200 PF08264 Anticodon-binding domain of tRNA C3B79_1201 PF01252 Signal peptidase (SPase) II C3B79_1202 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3B79_1203 PF02401 LytB protein C3B79_1209 PF05567 Neisseria PilC beta-propeller domain C3B79_1216 PF02540 NAD synthase C3B79_1216 PF00795 Carbon-nitrogen hydrolase C3B79_1217 PF00543 Nitrogen regulatory protein P-II C3B79_1219 PF02664 S-Ribosylhomocysteinase (LuxS) C3B79_1220 PF00990 Diguanylate cyclase, GGDEF domain C3B79_1221 PF17876 Cold shock domain C3B79_1221 PF08461 Ribonuclease R winged-helix domain C3B79_1221 PF08206 Ribonuclease B OB domain C3B79_1221 PF00575 S1 RNA binding domain C3B79_1221 PF00773 RNB domain C3B79_1222 PF08032 RNA 2'-O ribose methyltransferase substrate binding C3B79_1222 PF00588 SpoU rRNA Methylase family C3B79_1224 PF13673 Acetyltransferase (GNAT) domain C3B79_1228 PF01566 Natural resistance-associated macrophage protein C3B79_1229 PF01250 Ribosomal protein S6 C3B79_1230 PF01084 Ribosomal protein S18 C3B79_1231 PF03948 Ribosomal protein L9, C-terminal domain C3B79_1231 PF01281 Ribosomal protein L9, N-terminal domain C3B79_1232 PF00970 Oxidoreductase FAD-binding domain C3B79_1232 PF00175 Oxidoreductase NAD-binding domain C3B79_1236 PF08240 Alcohol dehydrogenase GroES-like domain C3B79_1236 PF14765 Polyketide synthase dehydratase C3B79_1236 PF08659 KR domain C3B79_1236 PF02801 Beta-ketoacyl synthase, C-terminal domain C3B79_1236 PF00109 Beta-ketoacyl synthase, N-terminal domain C3B79_1236 PF16197 Ketoacyl-synthetase C-terminal extension C3B79_1236 PF08990 Erythronolide synthase docking C3B79_1236 PF00698 Acyl transferase domain C3B79_1236 PF00550 Phosphopantetheine attachment site C3B79_1237 PF09335 SNARE associated Golgi protein C3B79_1238 PF05193 Peptidase M16 inactive domain C3B79_1238 PF00675 Insulinase (Peptidase family M16) C3B79_1239 PF04262 Glutamate-cysteine ligase C3B79_1242 PF00501 AMP-binding enzyme C3B79_1244 PF00583 Acetyltransferase (GNAT) family C3B79_1246 PF07728 AAA domain (dynein-related subfamily) C3B79_1246 PF17868 AAA lid domain C3B79_1246 PF12592 Protein of unknown function (DUF3763) C3B79_1247 PF05762 VWA domain containing CoxE-like protein C3B79_1248 PF13188 PAS domain C3B79_1248 PF03707 Bacterial signalling protein N terminal repeat C3B79_1248 PF00990 Diguanylate cyclase, GGDEF domain C3B79_1248 PF00563 EAL domain C3B79_1250 PF00072 Response regulator receiver domain C3B79_1250 PF00990 Diguanylate cyclase, GGDEF domain C3B79_1251 PF16658 Class II release factor RF3, C-terminal domain C3B79_1251 PF03144 Elongation factor Tu domain 2 C3B79_1251 PF00009 Elongation factor Tu GTP binding domain C3B79_1255 PF00583 Acetyltransferase (GNAT) family C3B79_1257 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3B79_1259 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_1259 PF03466 LysR substrate binding domain C3B79_1260 PF04371 Porphyromonas-type peptidyl-arginine deiminase C3B79_1261 PF01425 Amidase C3B79_1263 PF00753 Metallo-beta-lactamase superfamily C3B79_1265 PF00270 DEAD/DEAH box helicase C3B79_1265 PF00271 Helicase conserved C-terminal domain C3B79_1266 PF03466 LysR substrate binding domain C3B79_1266 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_1272 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase C3B79_1274 PF00034 Cytochrome c C3B79_1274 PF03150 Di-haem cytochrome c peroxidase C3B79_1277 PF00445 Ribonuclease T2 family C3B79_1279 PF03060 Nitronate monooxygenase C3B79_1286 PF09297 NADH pyrophosphatase zinc ribbon domain C3B79_1286 PF00293 NUDIX domain C3B79_1286 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C3B79_1287 PF00672 HAMP domain C3B79_1287 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_1287 PF00512 His Kinase A (phospho-acceptor) domain C3B79_1287 PF16527 Two-component sensor protein CpxA, periplasmic domain C3B79_1289 PF00072 Response regulator receiver domain C3B79_1289 PF00486 Transcriptional regulatory protein, C terminal C3B79_1290 PF00072 Response regulator receiver domain C3B79_1290 PF00486 Transcriptional regulatory protein, C terminal C3B79_1291 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C3B79_1292 PF12704 MacB-like periplasmic core domain C3B79_1292 PF02687 FtsX-like permease family C3B79_1292 PF00005 ABC transporter C3B79_1293 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3B79_1294 PF00005 ABC transporter C3B79_1295 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_1297 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_1298 PF00291 Pyridoxal-phosphate dependent enzyme C3B79_1299 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C3B79_1299 PF00326 Prolyl oligopeptidase family C3B79_1303 PF03710 Glutamate-ammonia ligase adenylyltransferase C3B79_1303 PF08335 GlnD PII-uridylyltransferase C3B79_1305 PF02743 Cache domain C3B79_1305 PF00672 HAMP domain C3B79_1305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_1306 PF00027 Cyclic nucleotide-binding domain C3B79_1306 PF00520 Ion transport protein C3B79_1307 PF08239 Bacterial SH3 domain C3B79_1309 PF14850 DNA-binding domain of Proline dehydrogenase C3B79_1309 PF00171 Aldehyde dehydrogenase family C3B79_1309 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C3B79_1309 PF01619 Proline dehydrogenase C3B79_1310 PF01619 Proline dehydrogenase C3B79_1310 PF00171 Aldehyde dehydrogenase family C3B79_1310 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C3B79_1310 PF14850 DNA-binding domain of Proline dehydrogenase C3B79_1311 PF09297 NADH pyrophosphatase zinc ribbon domain C3B79_1311 PF00293 NUDIX domain C3B79_1312 PF01208 Uroporphyrinogen decarboxylase (URO-D) C3B79_1313 PF00480 ROK family C3B79_1314 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C3B79_1314 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C3B79_1315 PF00162 Phosphoglycerate kinase C3B79_1316 PF01116 Fructose-bisphosphate aldolase class-II C3B79_1317 PF01266 FAD dependent oxidoreductase C3B79_1319 PF11412 Disulphide bond corrector protein DsbC C3B79_1319 PF02683 Cytochrome C biogenesis protein transmembrane region C3B79_1320 PF02683 Cytochrome C biogenesis protein transmembrane region C3B79_1320 PF11412 Disulphide bond corrector protein DsbC C3B79_1321 PF03091 CutA1 divalent ion tolerance protein C3B79_1324 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_1324 PF03466 LysR substrate binding domain C3B79_1325 PF01571 Aminomethyltransferase folate-binding domain C3B79_1326 PF03937 Flavinator of succinate dehydrogenase C3B79_1328 PF00890 FAD binding domain C3B79_1328 PF02910 Fumarate reductase flavoprotein C-term C3B79_1330 PF08281 Sigma-70, region 4 C3B79_1330 PF04542 Sigma-70 region 2 C3B79_1331 PF03872 Anti sigma-E protein RseA, N-terminal domain C3B79_1331 PF03873 Anti sigma-E protein RseA, C-terminal domain C3B79_1332 PF03888 MucB/RseB N-terminal domain C3B79_1332 PF17188 MucB/RseB C-terminal domain C3B79_1334 PF00009 Elongation factor Tu GTP binding domain C3B79_1334 PF06421 GTP-binding protein LepA C-terminus C3B79_1334 PF00679 Elongation factor G C-terminus C3B79_1334 PF03144 Elongation factor Tu domain 2 C3B79_1335 PF10502 Signal peptidase, peptidase S26 C3B79_1336 PF14622 Ribonuclease-III-like C3B79_1336 PF00035 Double-stranded RNA binding motif C3B79_1337 PF07650 KH domain C3B79_1337 PF01926 50S ribosome-binding GTPase C3B79_1338 PF02565 Recombination protein O C terminal C3B79_1338 PF11967 Recombination protein O N terminal C3B79_1339 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C3B79_1342 PF01116 Fructose-bisphosphate aldolase class-II C3B79_1343 PF01979 Amidohydrolase family C3B79_1344 PF03610 PTS system fructose IIA component C3B79_1345 PF03613 PTS system mannose/fructose/sorbose family IID component C3B79_1346 PF03609 PTS system sorbose-specific iic component C3B79_1347 PF03830 PTS system sorbose subfamily IIB component C3B79_1348 PF01380 SIS domain C3B79_1349 PF08013 Tagatose 6 phosphate kinase C3B79_1350 PF00455 DeoR C terminal sensor domain C3B79_1350 PF08220 DeoR-like helix-turn-helix domain C3B79_1351 PF00455 DeoR C terminal sensor domain C3B79_1351 PF08220 DeoR-like helix-turn-helix domain C3B79_1352 PF01510 N-acetylmuramoyl-L-alanine amidase C3B79_1353 PF07308 Protein of unknown function (DUF1456) C3B79_1354 PF00512 His Kinase A (phospho-acceptor) domain C3B79_1354 PF01627 Hpt domain C3B79_1354 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_1354 PF00672 HAMP domain C3B79_1354 PF00072 Response regulator receiver domain C3B79_1354 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C3B79_1355 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C3B79_1355 PF00072 Response regulator receiver domain C3B79_1355 PF00672 HAMP domain C3B79_1355 PF00512 His Kinase A (phospho-acceptor) domain C3B79_1355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_1355 PF01627 Hpt domain C3B79_1356 PF01938 TRAM domain C3B79_1356 PF05958 tRNA (Uracil-5-)-methyltransferase C3B79_1358 PF04607 Region found in RelA / SpoT proteins C3B79_1358 PF02824 TGS domain C3B79_1358 PF13291 ACT domain C3B79_1359 PF03819 MazG nucleotide pyrophosphohydrolase domain C3B79_1360 PF00117 Glutamine amidotransferase class-I C3B79_1360 PF06418 CTP synthase N-terminus C3B79_1361 PF00113 Enolase, C-terminal TIM barrel domain C3B79_1361 PF03952 Enolase, N-terminal domain C3B79_1363 PF04977 Septum formation initiator C3B79_1364 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C3B79_1365 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C3B79_1366 PF02542 YgbB family C3B79_1367 PF01142 tRNA pseudouridine synthase D (TruD) C3B79_1368 PF01975 Survival protein SurE C3B79_1370 PF09335 SNARE associated Golgi protein C3B79_1371 PF01551 Peptidase family M23 C3B79_1371 PF01476 LysM domain C3B79_1372 PF01551 Peptidase family M23 C3B79_1372 PF01476 LysM domain C3B79_1373 PF00140 Sigma-70 factor, region 1.2 C3B79_1373 PF04542 Sigma-70 region 2 C3B79_1373 PF04539 Sigma-70 region 3 C3B79_1373 PF04545 Sigma-70, region 4 C3B79_1374 PF00814 Glycoprotease family C3B79_1375 PF01165 Ribosomal protein S21 C3B79_1376 PF09424 Yqey-like protein C3B79_1377 PF01807 CHC2 zinc finger C3B79_1377 PF10410 DnaB-helicase binding domain of primase C3B79_1377 PF08275 DNA primase catalytic core, N-terminal domain C3B79_1377 PF08278 DNA primase DnaG DnaB-binding C3B79_1378 PF00140 Sigma-70 factor, region 1.2 C3B79_1378 PF04542 Sigma-70 region 2 C3B79_1378 PF04545 Sigma-70, region 4 C3B79_1378 PF04539 Sigma-70 region 3 C3B79_1378 PF03979 Sigma-70 factor, region 1.1 C3B79_1378 PF04546 Sigma-70, non-essential region C3B79_1384 PF02463 RecF/RecN/SMC N terminal domain C3B79_1387 PF01695 IstB-like ATP binding protein C3B79_1388 PF02796 Helix-turn-helix domain of resolvase C3B79_1388 PF00665 Integrase core domain C3B79_1399 PF02371 Transposase IS116/IS110/IS902 family C3B79_1399 PF01548 Transposase C3B79_1401 PF00128 Alpha amylase, catalytic domain C3B79_1405 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C3B79_1405 PF02843 Phosphoribosylglycinamide synthetase, C domain C3B79_1405 PF02844 Phosphoribosylglycinamide synthetase, N domain C3B79_1406 PF01808 AICARFT/IMPCHase bienzyme C3B79_1406 PF02142 MGS-like domain C3B79_1408 PF13411 MerR HTH family regulatory protein C3B79_1409 PF01872 RibD C-terminal domain C3B79_1410 PF03889 Alternative ribosome-rescue factor A C3B79_1411 PF06969 HemN C-terminal domain C3B79_1411 PF04055 Radical SAM superfamily C3B79_1413 PF01725 Ham1 family C3B79_1414 PF07690 Major Facilitator Superfamily C3B79_1415 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C3B79_1415 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C3B79_1417 PF13302 Acetyltransferase (GNAT) domain C3B79_1418 PF13302 Acetyltransferase (GNAT) domain C3B79_1419 PF02868 Thermolysin metallopeptidase, alpha-helical domain C3B79_1419 PF01447 Thermolysin metallopeptidase, catalytic domain C3B79_1419 PF03413 Peptidase propeptide and YPEB domain C3B79_1419 PF04151 Bacterial pre-peptidase C-terminal domain C3B79_1419 PF07504 Fungalysin/Thermolysin Propeptide Motif C3B79_1420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_1420 PF03466 LysR substrate binding domain C3B79_1422 PF07690 Major Facilitator Superfamily C3B79_1423 PF00267 Gram-negative porin C3B79_1424 PF03605 Anaerobic c4-dicarboxylate membrane transporter C3B79_1425 PF10415 Fumarase C C-terminus C3B79_1425 PF00206 Lyase C3B79_1426 PF04186 FxsA cytoplasmic membrane protein C3B79_1427 PF01554 MatE C3B79_1428 PF00166 Chaperonin 10 Kd subunit C3B79_1429 PF00118 TCP-1/cpn60 chaperonin family C3B79_1431 PF00563 EAL domain C3B79_1431 PF00990 Diguanylate cyclase, GGDEF domain C3B79_1431 PF13188 PAS domain C3B79_1431 PF03707 Bacterial signalling protein N terminal repeat C3B79_1433 PF00849 RNA pseudouridylate synthase C3B79_1434 PF18339 RapA N-terminal Tudor like domain 1 C3B79_1434 PF00176 SNF2 family N-terminal domain C3B79_1434 PF18337 RapA N-terminal Tudor like domain C3B79_1434 PF00271 Helicase conserved C-terminal domain C3B79_1434 PF12137 RNA polymerase recycling family C-terminal C3B79_1435 PF00271 Helicase conserved C-terminal domain C3B79_1435 PF18337 RapA N-terminal Tudor like domain C3B79_1435 PF18339 RapA N-terminal Tudor like domain 1 C3B79_1435 PF12137 RNA polymerase recycling family C-terminal C3B79_1435 PF00176 SNF2 family N-terminal domain C3B79_1443 PF02867 Ribonucleotide reductase, barrel domain C3B79_1443 PF00317 Ribonucleotide reductase, all-alpha domain C3B79_1443 PF08343 Ribonucleotide reductase N-terminal C3B79_1447 PF13638 PIN domain C3B79_1447 PF02562 PhoH-like protein C3B79_1448 PF00005 ABC transporter C3B79_1449 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_1453 PF00694 Aconitase C-terminal domain C3B79_1454 PF00330 Aconitase family (aconitate hydratase) C3B79_1455 PF00180 Isocitrate/isopropylmalate dehydrogenase C3B79_1456 PF08502 LeuA allosteric (dimerisation) domain C3B79_1456 PF00682 HMGL-like C3B79_1462 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3B79_1462 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3B79_1462 PF00205 Thiamine pyrophosphate enzyme, central domain C3B79_1464 PF10369 Small subunit of acetolactate synthase C3B79_1466 PF01515 Phosphate acetyl/butaryl transferase C3B79_1466 PF07085 DRTGG domain C3B79_1467 PF00871 Acetokinase family C3B79_1468 PF04217 Protein of unknown function, DUF412 C3B79_1469 PF03887 YfbU domain C3B79_1470 PF00578 AhpC/TSA family C3B79_1471 PF01842 ACT domain C3B79_1472 PF00701 Dihydrodipicolinate synthetase family C3B79_1473 PF06804 NlpB/DapX lipoprotein C3B79_1474 PF01259 SAICAR synthetase C3B79_1476 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_1476 PF03466 LysR substrate binding domain C3B79_1477 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) C3B79_1482 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_1482 PF00512 His Kinase A (phospho-acceptor) domain C3B79_1482 PF18415 Histidine kinase receptor ArcB trans-membrane domain C3B79_1482 PF01627 Hpt domain C3B79_1482 PF00989 PAS fold C3B79_1482 PF00072 Response regulator receiver domain C3B79_1483 PF13286 Phosphohydrolase-associated domain C3B79_1483 PF01966 HD domain C3B79_1485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_1485 PF09456 RcsC Alpha-Beta-Loop (ABL) C3B79_1485 PF00072 Response regulator receiver domain C3B79_1485 PF00512 His Kinase A (phospho-acceptor) domain C3B79_1486 PF03707 Bacterial signalling protein N terminal repeat C3B79_1486 PF00563 EAL domain C3B79_1486 PF00990 Diguanylate cyclase, GGDEF domain C3B79_1487 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_1487 PF00672 HAMP domain C3B79_1487 PF12729 Four helix bundle sensory module for signal transduction C3B79_1488 PF02357 Transcription termination factor nusG C3B79_1489 PF03180 NLPA lipoprotein C3B79_1490 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_1491 PF09383 NIL domain C3B79_1491 PF00005 ABC transporter C3B79_1493 PF00480 ROK family C3B79_1494 PF08331 Domain of unknown function (DUF1730) C3B79_1495 PF01256 Carbohydrate kinase C3B79_1495 PF03853 YjeF-related protein N-terminus C3B79_1496 PF01256 Carbohydrate kinase C3B79_1496 PF03853 YjeF-related protein N-terminus C3B79_1497 PF03853 YjeF-related protein N-terminus C3B79_1497 PF01256 Carbohydrate kinase C3B79_1498 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C3B79_1499 PF01520 N-acetylmuramoyl-L-alanine amidase C3B79_1503 PF08676 MutL C terminal dimerisation domain C3B79_1503 PF01119 DNA mismatch repair protein, C-terminal domain C3B79_1505 PF17209 Hfq protein C3B79_1506 PF01926 50S ribosome-binding GTPase C3B79_1506 PF13167 GTP-binding GTPase N-terminal C3B79_1506 PF16360 GTP-binding GTPase Middle Region C3B79_1507 PF01145 SPFH domain / Band 7 family C3B79_1507 PF12221 Bacterial membrane protein N terminal C3B79_1508 PF01145 SPFH domain / Band 7 family C3B79_1509 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) C3B79_1510 PF00348 Polyprenyl synthetase C3B79_1511 PF00829 Ribosomal prokaryotic L21 protein C3B79_1512 PF01016 Ribosomal L27 protein C3B79_1513 PF01926 50S ribosome-binding GTPase C3B79_1513 PF01018 GTP1/OBG C3B79_1515 PF13193 AMP-binding enzyme C-terminal domain C3B79_1515 PF00501 AMP-binding enzyme C3B79_1518 PF01966 HD domain C3B79_1520 PF00296 Luciferase-like monooxygenase C3B79_1522 PF00149 Calcineurin-like phosphoesterase C3B79_1523 PF04379 ApaG domain C3B79_1524 PF00398 Ribosomal RNA adenine dimethylase C3B79_1525 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C3B79_1526 PF09312 SurA N-terminal domain C3B79_1526 PF00639 PPIC-type PPIASE domain C3B79_1527 PF03968 OstA-like protein C3B79_1527 PF04453 LPS transport system D C3B79_1528 PF01636 Phosphotransferase enzyme family C3B79_1529 PF00483 Nucleotidyl transferase C3B79_1530 PF05099 Tellurite resistance protein TerB C3B79_1530 PF00226 DnaJ domain C3B79_1531 PF00860 Permease family C3B79_1532 PF00860 Permease family C3B79_1533 PF00860 Permease family C3B79_1535 PF00005 ABC transporter C3B79_1535 PF12848 ABC transporter C3B79_1540 PF01048 Phosphorylase superfamily C3B79_1541 PF01464 Transglycosylase SLT domain C3B79_1544 PF03466 LysR substrate binding domain C3B79_1544 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_1545 PF01048 Phosphorylase superfamily C3B79_1546 PF07670 Nucleoside recognition C3B79_1546 PF07662 Na+ dependent nucleoside transporter C-terminus C3B79_1546 PF01773 Na+ dependent nucleoside transporter N-terminus C3B79_1547 PF07662 Na+ dependent nucleoside transporter C-terminus C3B79_1547 PF01773 Na+ dependent nucleoside transporter N-terminus C3B79_1547 PF07670 Nucleoside recognition C3B79_1548 PF01791 DeoC/LacD family aldolase C3B79_1550 PF01370 NAD dependent epimerase/dehydratase family C3B79_1551 PF01370 NAD dependent epimerase/dehydratase family C3B79_1553 PF00005 ABC transporter C3B79_1554 PF01032 FecCD transport family C3B79_1556 PF06228 Haem utilisation ChuX/HutX C3B79_1557 PF01243 Pyridoxamine 5'-phosphate oxidase C3B79_1561 PF00593 TonB dependent receptor C3B79_1561 PF07715 TonB-dependent Receptor Plug Domain C3B79_1562 PF12832 MFS_1 like family C3B79_1563 PF13443 Cro/C1-type HTH DNA-binding domain C3B79_1567 PF00474 Sodium:solute symporter family C3B79_1568 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_1568 PF00512 His Kinase A (phospho-acceptor) domain C3B79_1568 PF00989 PAS fold C3B79_1570 PF00704 Glycosyl hydrolases family 18 C3B79_1570 PF08329 Chitinase A, N-terminal domain C3B79_1571 PF08329 Chitinase A, N-terminal domain C3B79_1571 PF00704 Glycosyl hydrolases family 18 C3B79_1573 PF12561 ToxR activated gene A lipoprotein domain C3B79_1573 PF17945 Beta/Gamma crystallin C3B79_1574 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading C3B79_1574 PF18416 N-acetylglucosamine binding protein domain 2 C3B79_1575 PF13847 Methyltransferase domain C3B79_1576 PF00027 Cyclic nucleotide-binding domain C3B79_1576 PF13545 Crp-like helix-turn-helix domain C3B79_1577 PF02566 OsmC-like protein C3B79_1580 PF00485 Phosphoribulokinase / Uridine kinase family C3B79_1581 PF00893 Small Multidrug Resistance protein C3B79_1582 PF00892 EamA-like transporter family C3B79_1583 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C3B79_1584 PF01522 Polysaccharide deacetylase C3B79_1585 PF00551 Formyl transferase C3B79_1585 PF01370 NAD dependent epimerase/dehydratase family C3B79_1585 PF02911 Formyl transferase, C-terminal domain C3B79_1586 PF00535 Glycosyl transferase family 2 C3B79_1587 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C3B79_1588 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C3B79_1588 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C3B79_1588 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C3B79_1589 PF06794 Uncharacterised protein family (UPF0270) C3B79_1590 PF00360 Phytochrome region C3B79_1590 PF00563 EAL domain C3B79_1590 PF01590 GAF domain C3B79_1590 PF00990 Diguanylate cyclase, GGDEF domain C3B79_1591 PF00561 alpha/beta hydrolase fold C3B79_1592 PF01584 CheW-like domain C3B79_1592 PF00072 Response regulator receiver domain C3B79_1594 PF09526 Probable metal-binding protein (DUF2387) C3B79_1595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3B79_1596 PF04102 SlyX C3B79_1598 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3B79_1598 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C3B79_1599 PF00072 Response regulator receiver domain C3B79_1599 PF02954 Bacterial regulatory protein, Fis family C3B79_1599 PF00158 Sigma-54 interaction domain C3B79_1603 PF02872 5'-nucleotidase, C-terminal domain C3B79_1603 PF00149 Calcineurin-like phosphoesterase C3B79_1604 PF00563 EAL domain C3B79_1604 PF00196 Bacterial regulatory proteins, luxR family C3B79_1608 PF00772 DnaB-like helicase N terminal domain C3B79_1608 PF03796 DnaB-like helicase C terminal domain C3B79_1609 PF00842 Alanine racemase, C-terminal domain C3B79_1609 PF01168 Alanine racemase, N-terminal domain C3B79_1610 PF00842 Alanine racemase, C-terminal domain C3B79_1610 PF01168 Alanine racemase, N-terminal domain C3B79_1611 PF12838 4Fe-4S dicluster domain C3B79_1613 PF00989 PAS fold C3B79_1613 PF00563 EAL domain C3B79_1613 PF00990 Diguanylate cyclase, GGDEF domain C3B79_1613 PF01590 GAF domain C3B79_1616 PF15976 CS1-pili formation C-terminal C3B79_1616 PF16967 E-set like domain C3B79_1618 PF00072 Response regulator receiver domain C3B79_1618 PF00196 Bacterial regulatory proteins, luxR family C3B79_1619 PF01627 Hpt domain C3B79_1619 PF00512 His Kinase A (phospho-acceptor) domain C3B79_1619 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_1619 PF00672 HAMP domain C3B79_1619 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C3B79_1619 PF00072 Response regulator receiver domain C3B79_1620 PF00512 His Kinase A (phospho-acceptor) domain C3B79_1620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_1620 PF01627 Hpt domain C3B79_1620 PF00989 PAS fold C3B79_1620 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3B79_1620 PF00072 Response regulator receiver domain C3B79_1625 PF00266 Aminotransferase class-V C3B79_1626 PF00072 Response regulator receiver domain C3B79_1626 PF01339 CheB methylesterase C3B79_1627 PF03975 CheD chemotactic sensory transduction C3B79_1628 PF01739 CheR methyltransferase, SAM binding domain C3B79_1628 PF03705 CheR methyltransferase, all-alpha domain C3B79_1629 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_1629 PF02203 Tar ligand binding domain homologue C3B79_1629 PF00672 HAMP domain C3B79_1630 PF01584 CheW-like domain C3B79_1631 PF12729 Four helix bundle sensory module for signal transduction C3B79_1631 PF00672 HAMP domain C3B79_1631 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_1632 PF02895 Signal transducing histidine kinase, homodimeric domain C3B79_1632 PF09078 CheY binding C3B79_1632 PF01627 Hpt domain C3B79_1632 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_1632 PF01584 CheW-like domain C3B79_1634 PF00072 Response regulator receiver domain C3B79_1635 PF02743 Cache domain C3B79_1635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_1635 PF00672 HAMP domain C3B79_1638 PF03466 LysR substrate binding domain C3B79_1638 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_1639 PF01810 LysE type translocator C3B79_1640 PF01136 Peptidase family U32 C3B79_1640 PF12392 Collagenase C3B79_1643 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C3B79_1643 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C3B79_1644 PF06029 AlkA N-terminal domain C3B79_1644 PF12833 Helix-turn-helix domain C3B79_1644 PF00730 HhH-GPD superfamily base excision DNA repair protein C3B79_1644 PF02805 Metal binding domain of Ada C3B79_1645 PF02805 Metal binding domain of Ada C3B79_1645 PF00730 HhH-GPD superfamily base excision DNA repair protein C3B79_1645 PF06029 AlkA N-terminal domain C3B79_1645 PF12833 Helix-turn-helix domain C3B79_1647 PF02074 Carboxypeptidase Taq (M32) metallopeptidase C3B79_1652 PF00106 short chain dehydrogenase C3B79_1653 PF03573 outer membrane porin, OprD family C3B79_1654 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_1656 PF02447 GntP family permease C3B79_1657 PF01370 NAD dependent epimerase/dehydratase family C3B79_1659 PF01370 NAD dependent epimerase/dehydratase family C3B79_1660 PF01261 Xylose isomerase-like TIM barrel C3B79_1661 PF00596 Class II Aldolase and Adducin N-terminal domain C3B79_1662 PF07005 Sugar-binding N-terminal domain C3B79_1662 PF17042 Nucleotide-binding C-terminal domain C3B79_1663 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C3B79_1663 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C3B79_1664 PF08220 DeoR-like helix-turn-helix domain C3B79_1664 PF00455 DeoR C terminal sensor domain C3B79_1665 PF00455 DeoR C terminal sensor domain C3B79_1665 PF08220 DeoR-like helix-turn-helix domain C3B79_1667 PF13195 Protein of unknown function (DUF4011) C3B79_1667 PF13086 AAA domain C3B79_1667 PF13087 AAA domain C3B79_1669 PF11924 Inverse autotransporter, beta-domain C3B79_1670 PF02369 Bacterial Ig-like domain (group 1) C3B79_1670 PF09134 Invasin, domain 3 C3B79_1670 PF11924 Inverse autotransporter, beta-domain C3B79_1675 PF00563 EAL domain C3B79_1675 PF08447 PAS fold C3B79_1675 PF08448 PAS fold C3B79_1675 PF00990 Diguanylate cyclase, GGDEF domain C3B79_1679 PF18500 CadC C-terminal domain 1 C3B79_1679 PF00486 Transcriptional regulatory protein, C terminal C3B79_1687 PF01817 Chorismate mutase type II C3B79_1687 PF00800 Prephenate dehydratase C3B79_1693 PF08349 Protein of unknown function (DUF1722) C3B79_1694 PF13411 MerR HTH family regulatory protein C3B79_1695 PF00875 DNA photolyase C3B79_1695 PF03441 FAD binding domain of DNA photolyase C3B79_1697 PF00106 short chain dehydrogenase C3B79_1706 PF00210 Ferritin-like domain C3B79_1708 PF03063 Prismane/CO dehydrogenase family C3B79_1709 PF00042 Globin C3B79_1709 PF00175 Oxidoreductase NAD-binding domain C3B79_1709 PF00970 Oxidoreductase FAD-binding domain C3B79_1711 PF16363 GDP-mannose 4,6 dehydratase C3B79_1712 PF06965 Na+/H+ antiporter 1 C3B79_1712 PF13462 Thioredoxin C3B79_1714 PF03472 Autoinducer binding domain C3B79_1714 PF00196 Bacterial regulatory proteins, luxR family C3B79_1715 PF05638 Type VI secretion system effector, Hcp C3B79_1716 PF04717 Type VI secretion system, phage-baseplate injector C3B79_1717 PF04717 Type VI secretion system, phage-baseplate injector C3B79_1718 PF04717 Type VI secretion system, phage-baseplate injector C3B79_1718 PF16671 Actin cross-linking domain C3B79_1720 PF02542 YgbB family C3B79_1720 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C3B79_1725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_1725 PF03466 LysR substrate binding domain C3B79_1726 PF03306 Alpha-acetolactate decarboxylase C3B79_1727 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3B79_1727 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3B79_1727 PF00205 Thiamine pyrophosphate enzyme, central domain C3B79_1728 PF01965 DJ-1/PfpI family C3B79_1729 PF02558 Ketopantoate reductase PanE/ApbA C3B79_1729 PF08546 Ketopantoate reductase PanE/ApbA C terminal C3B79_1730 PF04461 Protein of unknown function (DUF520) C3B79_1731 PF03502 Nucleoside-specific channel-forming protein, Tsx C3B79_1732 PF07690 Major Facilitator Superfamily C3B79_1734 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C3B79_1736 PF05175 Methyltransferase small domain C3B79_1737 PF01722 BolA-like protein C3B79_1739 PF11973 NQRA C-terminal domain C3B79_1739 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) C3B79_1740 PF03116 NQR2, RnfD, RnfE family C3B79_1741 PF04205 FMN-binding domain C3B79_1742 PF02508 Rnf-Nqr subunit, membrane protein C3B79_1743 PF02508 Rnf-Nqr subunit, membrane protein C3B79_1744 PF00970 Oxidoreductase FAD-binding domain C3B79_1744 PF00111 2Fe-2S iron-sulfur cluster binding domain C3B79_1744 PF00175 Oxidoreductase NAD-binding domain C3B79_1745 PF02424 ApbE family C3B79_1748 PF11799 impB/mucB/samB family C-terminal domain C3B79_1748 PF00817 impB/mucB/samB family C3B79_1748 PF11798 IMS family HHH motif C3B79_1749 PF00672 HAMP domain C3B79_1749 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_1750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_1750 PF03466 LysR substrate binding domain C3B79_1752 PF04241 Protein of unknown function (DUF423) C3B79_1753 PF01728 FtsJ-like methyltransferase C3B79_1753 PF18125 RlmM ferredoxin-like domain C3B79_1755 PF00180 Isocitrate/isopropylmalate dehydrogenase C3B79_1755 PF18324 Hypothetical protein TT1725 C3B79_1756 PF01367 5'-3' exonuclease, C-terminal SAM fold C3B79_1756 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C3B79_1757 PF11892 Domain of unknown function (DUF3412) C3B79_1757 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases C3B79_1757 PF03641 Possible lysine decarboxylase C3B79_1758 PF00990 Diguanylate cyclase, GGDEF domain C3B79_1758 PF07694 5TMR of 5TMR-LYT C3B79_1762 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C3B79_1762 PF14489 QueF-like protein C3B79_1763 PF07348 Syd protein (SUKH-2) C3B79_1764 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) C3B79_1769 PF04287 tRNA pseudouridine synthase C C3B79_1770 PF00849 RNA pseudouridylate synthase C3B79_1771 PF00849 RNA pseudouridylate synthase C3B79_1772 PF00258 Flavodoxin C3B79_1773 PF02264 LamB porin C3B79_1775 PF07148 Maltose operon periplasmic protein precursor (MalM) C3B79_1776 PF02378 Phosphotransferase system, EIIC C3B79_1776 PF00367 phosphotransferase system, EIIB C3B79_1777 PF11944 Protein of unknown function (DUF3461) C3B79_1778 PF00132 Bacterial transferase hexapeptide (six repeats) C3B79_1778 PF14602 Hexapeptide repeat of succinyl-transferase C3B79_1778 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal C3B79_1779 PF01966 HD domain C3B79_1779 PF08335 GlnD PII-uridylyltransferase C3B79_1779 PF01842 ACT domain C3B79_1779 PF01909 Nucleotidyltransferase domain C3B79_1780 PF00557 Metallopeptidase family M24 C3B79_1781 PF00557 Metallopeptidase family M24 C3B79_1782 PF00318 Ribosomal protein S2 C3B79_1783 PF00889 Elongation factor TS C3B79_1784 PF00696 Amino acid kinase family C3B79_1785 PF01765 Ribosome recycling factor C3B79_1786 PF01255 Putative undecaprenyl diphosphate synthase C3B79_1788 PF13288 DXP reductoisomerase C-terminal domain C3B79_1788 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C3B79_1788 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C3B79_1789 PF02163 Peptidase family M50 C3B79_1789 PF17820 PDZ domain C3B79_1790 PF07244 Surface antigen variable number repeat C3B79_1790 PF01103 Surface antigen C3B79_1791 PF03938 Outer membrane protein (OmpH-like) C3B79_1792 PF00132 Bacterial transferase hexapeptide (six repeats) C3B79_1792 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C3B79_1793 PF07977 FabA-like domain C3B79_1794 PF00132 Bacterial transferase hexapeptide (six repeats) C3B79_1794 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C3B79_1795 PF02684 Lipid-A-disaccharide synthetase C3B79_1796 PF01351 Ribonuclease HII C3B79_1797 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C3B79_1797 PF01336 OB-fold nucleic acid binding domain C3B79_1797 PF02811 PHP domain C3B79_1797 PF14579 Helix-hairpin-helix motif C3B79_1797 PF07733 Bacterial DNA polymerase III alpha NTPase domain C3B79_1798 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C3B79_1799 PF18500 CadC C-terminal domain 1 C3B79_1799 PF00486 Transcriptional regulatory protein, C terminal C3B79_1801 PF13520 Amino acid permease C3B79_1802 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain C3B79_1802 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C3B79_1802 PF01276 Orn/Lys/Arg decarboxylase, major domain C3B79_1803 PF08543 Phosphomethylpyrimidine kinase C3B79_1805 PF03466 LysR substrate binding domain C3B79_1805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_1807 PF12706 Beta-lactamase superfamily domain C3B79_1808 PF03466 LysR substrate binding domain C3B79_1808 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_1809 PF13520 Amino acid permease C3B79_1810 PF13302 Acetyltransferase (GNAT) domain C3B79_1811 PF12848 ABC transporter C3B79_1811 PF16326 ABC transporter C-terminal domain C3B79_1811 PF00005 ABC transporter C3B79_1814 PF05649 Peptidase family M13 C3B79_1814 PF01431 Peptidase family M13 C3B79_1815 PF01171 PP-loop family C3B79_1815 PF11734 TilS substrate C-terminal domain C3B79_1815 PF09179 TilS substrate binding domain C3B79_1816 PF00990 Diguanylate cyclase, GGDEF domain C3B79_1817 PF02254 TrkA-N domain C3B79_1817 PF02080 TrkA-C domain C3B79_1817 PF00999 Sodium/hydrogen exchanger family C3B79_1822 PF00072 Response regulator receiver domain C3B79_1822 PF00196 Bacterial regulatory proteins, luxR family C3B79_1824 PF00128 Alpha amylase, catalytic domain C3B79_1828 PF00535 Glycosyl transferase family 2 C3B79_1833 PF01471 Putative peptidoglycan binding domain C3B79_1833 PF03734 L,D-transpeptidase catalytic domain C3B79_1834 PF05951 Bacterial protein of unknown function (DUF882) C3B79_1836 PF03458 UPF0126 domain C3B79_1838 PF06470 SMC proteins Flexible Hinge Domain C3B79_1838 PF02463 RecF/RecN/SMC N terminal domain C3B79_1839 PF02463 RecF/RecN/SMC N terminal domain C3B79_1840 PF04354 ZipA, C-terminal FtsZ-binding domain C3B79_1841 PF12826 Helix-hairpin-helix motif C3B79_1841 PF00533 BRCA1 C Terminus (BRCT) domain C3B79_1841 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C3B79_1841 PF03120 NAD-dependent DNA ligase OB-fold domain C3B79_1841 PF01653 NAD-dependent DNA ligase adenylation domain C3B79_1842 PF00533 BRCA1 C Terminus (BRCT) domain C3B79_1842 PF12826 Helix-hairpin-helix motif C3B79_1842 PF01653 NAD-dependent DNA ligase adenylation domain C3B79_1842 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C3B79_1842 PF03120 NAD-dependent DNA ligase OB-fold domain C3B79_1844 PF13597 Anaerobic ribonucleoside-triphosphate reductase C3B79_1844 PF03477 ATP cone domain C3B79_1846 PF01679 Proteolipid membrane potential modulator C3B79_1851 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C3B79_1851 PF00529 HlyD membrane-fusion protein of T1SS C3B79_1852 PF01047 MarR family C3B79_1855 PF03390 2-hydroxycarboxylate transporter family C3B79_1856 PF03949 Malic enzyme, NAD binding domain C3B79_1856 PF00390 Malic enzyme, N-terminal domain C3B79_1857 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C3B79_1857 PF00989 PAS fold C3B79_1857 PF17203 Single cache domain 3 C3B79_1857 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_1858 PF00072 Response regulator receiver domain C3B79_1858 PF12431 Transcriptional regulator C3B79_1859 PF00892 EamA-like transporter family C3B79_1861 PF00171 Aldehyde dehydrogenase family C3B79_1863 PF02954 Bacterial regulatory protein, Fis family C3B79_1863 PF00158 Sigma-54 interaction domain C3B79_1863 PF01590 GAF domain C3B79_1864 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3B79_1864 PF02770 Acyl-CoA dehydrogenase, middle domain C3B79_1864 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3B79_1865 PF02515 CoA-transferase family III C3B79_1866 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3B79_1867 PF00486 Transcriptional regulatory protein, C terminal C3B79_1867 PF00072 Response regulator receiver domain C3B79_1868 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_1868 PF00512 His Kinase A (phospho-acceptor) domain C3B79_1868 PF11808 Phosphate regulon sensor protein PhoR C3B79_1868 PF00989 PAS fold C3B79_1869 PF12849 PBP superfamily domain C3B79_1871 PF01435 Peptidase family M48 C3B79_1873 PF00480 ROK family C3B79_1874 PF03932 CutC family C3B79_1876 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C3B79_1876 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3B79_1877 PF00005 ABC transporter C3B79_1881 PF00293 NUDIX domain C3B79_1883 PF08534 Redoxin C3B79_1884 PF01699 Sodium/calcium exchanger protein C3B79_1885 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C3B79_1885 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C3B79_1886 PF01235 Sodium:alanine symporter family C3B79_1888 PF00860 Permease family C3B79_1890 PF00990 Diguanylate cyclase, GGDEF domain C3B79_1890 PF00072 Response regulator receiver domain C3B79_1891 PF10692 Protein of unknown function (DUF2498) C3B79_1892 PF01554 MatE C3B79_1893 PF12833 Helix-turn-helix domain C3B79_1894 PF03949 Malic enzyme, NAD binding domain C3B79_1894 PF00390 Malic enzyme, N-terminal domain C3B79_1895 PF01389 OmpA-like transmembrane domain C3B79_1895 PF00691 OmpA family C3B79_1897 PF00691 OmpA family C3B79_1897 PF01389 OmpA-like transmembrane domain C3B79_1898 PF00691 OmpA family C3B79_1898 PF01389 OmpA-like transmembrane domain C3B79_1902 PF00209 Sodium:neurotransmitter symporter family C3B79_1903 PF01734 Patatin-like phospholipase C3B79_1904 PF00990 Diguanylate cyclase, GGDEF domain C3B79_1905 PF00529 HlyD membrane-fusion protein of T1SS C3B79_1905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C3B79_1906 PF00873 AcrB/AcrD/AcrF family C3B79_1908 PF08497 Radical SAM N-terminal C3B79_1908 PF04055 Radical SAM superfamily C3B79_1908 PF11842 Domain of unknown function (DUF3362) C3B79_1911 PF12833 Helix-turn-helix domain C3B79_1912 PF05656 Protein of unknown function (DUF805) C3B79_1916 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C3B79_1918 PF02075 Crossover junction endodeoxyribonuclease RuvC C3B79_1919 PF00230 Major intrinsic protein C3B79_1920 PF01551 Peptidase family M23 C3B79_1920 PF01464 Transglycosylase SLT domain C3B79_1920 PF10145 Phage-related minor tail protein C3B79_1921 PF00128 Alpha amylase, catalytic domain C3B79_1922 PF00128 Alpha amylase, catalytic domain C3B79_1923 PF01551 Peptidase family M23 C3B79_1928 PF13396 Phospholipase_D-nuclease N-terminal C3B79_1928 PF13091 PLD-like domain C3B79_1930 PF00551 Formyl transferase C3B79_1930 PF01842 ACT domain C3B79_1931 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C3B79_1933 PF00085 Thioredoxin C3B79_1934 PF01648 4'-phosphopantetheinyl transferase superfamily C3B79_1935 PF00877 NlpC/P60 family C3B79_1936 PF05971 RNA methyltransferase C3B79_1937 PF05971 RNA methyltransferase C3B79_1940 PF17969 L,D-transpeptidase C-terminal domain C3B79_1940 PF01476 LysM domain C3B79_1940 PF03734 L,D-transpeptidase catalytic domain C3B79_1943 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3B79_1944 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_1945 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_1945 PF12911 N-terminal TM domain of oligopeptide transport permease C C3B79_1946 PF00005 ABC transporter C3B79_1946 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3B79_1947 PF00465 Iron-containing alcohol dehydrogenase C3B79_1948 PF05025 RbsD / FucU transport protein family C3B79_1950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C3B79_1950 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C3B79_1951 PF02952 L-fucose isomerase, C-terminal domain C3B79_1951 PF07882 L-fucose isomerase, second N-terminal domain C3B79_1951 PF07881 L-fucose isomerase, first N-terminal domain C3B79_1952 PF07690 Major Facilitator Superfamily C3B79_1953 PF08220 DeoR-like helix-turn-helix domain C3B79_1953 PF00455 DeoR C terminal sensor domain C3B79_1954 PF00141 Peroxidase C3B79_1955 PF00701 Dihydrodipicolinate synthetase family C3B79_1956 PF01380 SIS domain C3B79_1956 PF01418 Helix-turn-helix domain, rpiR family C3B79_1957 PF00480 ROK family C3B79_1958 PF00474 Sodium:solute symporter family C3B79_1959 PF00474 Sodium:solute symporter family C3B79_1960 PF04074 YhcH/YjgK/YiaL C3B79_1962 PF13859 BNR repeat-like domain C3B79_1963 PF13088 BNR repeat-like domain C3B79_1963 PF09264 Vibrio cholerae sialidase, lectin insertion C3B79_1966 PF00665 Integrase core domain C3B79_1966 PF02796 Helix-turn-helix domain of resolvase C3B79_1967 PF01695 IstB-like ATP binding protein C3B79_1971 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region C3B79_1971 PF07676 WD40-like Beta Propeller Repeat C3B79_1971 PF00326 Prolyl oligopeptidase family C3B79_1972 PF12146 Serine aminopeptidase, S33 C3B79_1973 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_1973 PF03466 LysR substrate binding domain C3B79_1974 PF00893 Small Multidrug Resistance protein C3B79_1975 PF00893 Small Multidrug Resistance protein C3B79_1977 PF06130 Phosphate propanoyltransferase C3B79_1978 PF00936 BMC domain C3B79_1979 PF13187 4Fe-4S dicluster domain C3B79_1979 PF04055 Radical SAM superfamily C3B79_1980 PF02901 Pyruvate formate lyase-like C3B79_1980 PF01228 Glycine radical C3B79_1981 PF00465 Iron-containing alcohol dehydrogenase C3B79_1981 PF00171 Aldehyde dehydrogenase family C3B79_1983 PF00465 Iron-containing alcohol dehydrogenase C3B79_1983 PF00171 Aldehyde dehydrogenase family C3B79_1984 PF00936 BMC domain C3B79_1985 PF00936 BMC domain C3B79_1986 PF00936 BMC domain C3B79_1991 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_1991 PF03466 LysR substrate binding domain C3B79_1992 PF02634 FdhD/NarQ family C3B79_1993 PF00384 Molybdopterin oxidoreductase C3B79_2002 PF00440 Bacterial regulatory proteins, tetR family C3B79_2003 PF09317 Domain of unknown function (DUF1974) C3B79_2003 PF02770 Acyl-CoA dehydrogenase, middle domain C3B79_2003 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3B79_2003 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3B79_2005 PF00873 AcrB/AcrD/AcrF family C3B79_2006 PF00873 AcrB/AcrD/AcrF family C3B79_2008 PF02887 Pyruvate kinase, alpha/beta domain C3B79_2008 PF00224 Pyruvate kinase, barrel domain C3B79_2009 PF01380 SIS domain C3B79_2009 PF01418 Helix-turn-helix domain, rpiR family C3B79_2010 PF02685 Glucokinase C3B79_2012 PF00072 Response regulator receiver domain C3B79_2012 PF00486 Transcriptional regulatory protein, C terminal C3B79_2013 PF00664 ABC transporter transmembrane region C3B79_2013 PF00005 ABC transporter C3B79_2013 PF03412 Peptidase C39 family C3B79_2015 PF00005 ABC transporter C3B79_2015 PF00664 ABC transporter transmembrane region C3B79_2015 PF03412 Peptidase C39 family C3B79_2016 PF00664 ABC transporter transmembrane region C3B79_2016 PF00005 ABC transporter C3B79_2016 PF03412 Peptidase C39 family C3B79_2018 PF02794 RTX toxin acyltransferase family C3B79_2019 PF07634 RtxA repeat C3B79_2019 PF16671 Actin cross-linking domain C3B79_2019 PF11713 Peptidase C80 family C3B79_2019 PF12146 Serine aminopeptidase, S33 C3B79_2019 PF11647 Membrane Localization Domain C3B79_2020 PF07634 RtxA repeat C3B79_2020 PF11647 Membrane Localization Domain C3B79_2020 PF16671 Actin cross-linking domain C3B79_2020 PF11713 Peptidase C80 family C3B79_2020 PF12146 Serine aminopeptidase, S33 C3B79_2021 PF12146 Serine aminopeptidase, S33 C3B79_2021 PF16671 Actin cross-linking domain C3B79_2021 PF11647 Membrane Localization Domain C3B79_2021 PF07634 RtxA repeat C3B79_2021 PF11713 Peptidase C80 family C3B79_2022 PF16671 Actin cross-linking domain C3B79_2022 PF12146 Serine aminopeptidase, S33 C3B79_2022 PF07634 RtxA repeat C3B79_2022 PF11713 Peptidase C80 family C3B79_2022 PF11647 Membrane Localization Domain C3B79_2023 PF11713 Peptidase C80 family C3B79_2023 PF07634 RtxA repeat C3B79_2023 PF12146 Serine aminopeptidase, S33 C3B79_2023 PF11647 Membrane Localization Domain C3B79_2023 PF16671 Actin cross-linking domain C3B79_2025 PF04055 Radical SAM superfamily C3B79_2025 PF18693 TRAM domain C3B79_2025 PF00919 Uncharacterized protein family UPF0004 C3B79_2026 PF00072 Response regulator receiver domain C3B79_2028 PF02049 Flagellar hook-basal body complex protein FliE C3B79_2029 PF08345 Flagellar M-ring protein C-terminal C3B79_2029 PF01514 Secretory protein of YscJ/FliF family C3B79_2030 PF08345 Flagellar M-ring protein C-terminal C3B79_2030 PF01514 Secretory protein of YscJ/FliF family C3B79_2031 PF14842 FliG N-terminal domain C3B79_2031 PF01706 FliG C-terminal domain C3B79_2031 PF14841 FliG middle domain C3B79_2033 PF18269 T3SS EscN ATPase C-terminal domain C3B79_2033 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3B79_2037 PF02154 Flagellar motor switch protein FliM C3B79_2037 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C3B79_2038 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C3B79_2039 PF04347 Flagellar biosynthesis protein, FliO C3B79_2040 PF00813 FliP family C3B79_2041 PF01313 Bacterial export proteins, family 3 C3B79_2042 PF01311 Bacterial export proteins, family 1 C3B79_2043 PF01312 FlhB HrpN YscU SpaS Family C3B79_2044 PF01312 FlhB HrpN YscU SpaS Family C3B79_2045 PF00771 FHIPEP family C3B79_2046 PF00448 SRP54-type protein, GTPase domain C3B79_2047 PF10609 NUBPL iron-transfer P-loop NTPase C3B79_2048 PF04542 Sigma-70 region 2 C3B79_2048 PF04539 Sigma-70 region 3 C3B79_2048 PF04545 Sigma-70, region 4 C3B79_2049 PF00072 Response regulator receiver domain C3B79_2050 PF04344 Chemotaxis phosphatase, CheZ C3B79_2051 PF07194 P2 response regulator binding domain C3B79_2051 PF01627 Hpt domain C3B79_2051 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_2051 PF02895 Signal transducing histidine kinase, homodimeric domain C3B79_2051 PF01584 CheW-like domain C3B79_2052 PF01339 CheB methylesterase C3B79_2052 PF00072 Response regulator receiver domain C3B79_2053 PF01618 MotA/TolQ/ExbB proton channel family C3B79_2054 PF00691 OmpA family C3B79_2054 PF13677 Membrane MotB of proton-channel complex MotA/MotB C3B79_2055 PF13614 AAA domain C3B79_2057 PF01584 CheW-like domain C3B79_2059 PF00005 ABC transporter C3B79_2060 PF03379 CcmB protein C3B79_2061 PF01578 Cytochrome C assembly protein C3B79_2062 PF04995 Heme exporter protein D (CcmD) C3B79_2063 PF03100 CcmE C3B79_2064 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C3B79_2064 PF01578 Cytochrome C assembly protein C3B79_2065 PF08534 Redoxin C3B79_2066 PF03918 Cytochrome C biogenesis protein C3B79_2067 PF03918 Cytochrome C biogenesis protein C3B79_2070 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C3B79_2070 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C3B79_2071 PF00462 Glutaredoxin C3B79_2072 PF01029 NusB family C3B79_2072 PF01189 16S rRNA methyltransferase RsmB/F C3B79_2075 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C3B79_2075 PF01243 Pyridoxamine 5'-phosphate oxidase C3B79_2076 PF13417 Glutathione S-transferase, N-terminal domain C3B79_2076 PF00043 Glutathione S-transferase, C-terminal domain C3B79_2079 PF13508 Acetyltransferase (GNAT) domain C3B79_2080 PF08007 Cupin superfamily protein C3B79_2081 PF00206 Lyase C3B79_2081 PF08328 Adenylosuccinate lyase C-terminal C3B79_2082 PF04356 Protein of unknown function (DUF489) C3B79_2084 PF00293 NUDIX domain C3B79_2085 PF00849 RNA pseudouridylate synthase C3B79_2087 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3B79_2089 PF07690 Major Facilitator Superfamily C3B79_2090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3B79_2090 PF02378 Phosphotransferase system, EIIC C3B79_2090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3B79_2093 PF00583 Acetyltransferase (GNAT) family C3B79_2096 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C3B79_2096 PF00356 Bacterial regulatory proteins, lacI family C3B79_2098 PF02378 Phosphotransferase system, EIIC C3B79_2098 PF00367 phosphotransferase system, EIIB C3B79_2099 PF02378 Phosphotransferase system, EIIC C3B79_2099 PF00367 phosphotransferase system, EIIB C3B79_2100 PF00155 Aminotransferase class I and II C3B79_2101 PF02796 Helix-turn-helix domain of resolvase C3B79_2101 PF00665 Integrase core domain C3B79_2102 PF01695 IstB-like ATP binding protein C3B79_2108 PF01238 Phosphomannose isomerase type I C3B79_2109 PF12833 Helix-turn-helix domain C3B79_2110 PF12833 Helix-turn-helix domain C3B79_2110 PF02311 AraC-like ligand binding domain C3B79_2111 PF00180 Isocitrate/isopropylmalate dehydrogenase C3B79_2113 PF00291 Pyridoxal-phosphate dependent enzyme C3B79_2114 PF02447 GntP family permease C3B79_2116 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_2116 PF03466 LysR substrate binding domain C3B79_2118 PF04320 Protein with unknown function (DUF469) C3B79_2119 PF01420 Type I restriction modification DNA specificity domain C3B79_2120 PF02384 N-6 DNA Methylase C3B79_2121 PF00271 Helicase conserved C-terminal domain C3B79_2121 PF08463 EcoEI R protein C-terminal C3B79_2121 PF04851 Type III restriction enzyme, res subunit C3B79_2121 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C3B79_2122 PF04471 Restriction endonuclease C3B79_2122 PF14338 Mrr N-terminal domain C3B79_2123 PF00589 Phage integrase family C3B79_2123 PF02899 Phage integrase, N-terminal SAM-like domain C3B79_2135 PF04381 Putative exonuclease, RdgC C3B79_2143 PF12684 PDDEXK-like domain of unknown function (DUF3799) C3B79_2143 PF06630 Enterobacterial exodeoxyribonuclease VIII C3B79_2146 PF09669 Phage regulatory protein Rha (Phage_pRha) C3B79_2146 PF10549 ORF11CD3 domain C3B79_2151 PF03374 Phage antirepressor protein KilAC domain C3B79_2151 PF09669 Phage regulatory protein Rha (Phage_pRha) C3B79_2160 PF05772 NinB protein C3B79_2165 PF13438 Domain of unknown function (DUF4113) C3B79_2165 PF00817 impB/mucB/samB family C3B79_2165 PF11799 impB/mucB/samB family C-terminal domain C3B79_2166 PF13438 Domain of unknown function (DUF4113) C3B79_2166 PF00817 impB/mucB/samB family C3B79_2166 PF11799 impB/mucB/samB family C-terminal domain C3B79_2200 PF00072 Response regulator receiver domain C3B79_2200 PF00196 Bacterial regulatory proteins, luxR family C3B79_2202 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C3B79_2202 PF00270 DEAD/DEAH box helicase C3B79_2202 PF04408 Helicase associated domain (HA2) C3B79_2202 PF11898 Domain of unknown function (DUF3418) C3B79_2202 PF00271 Helicase conserved C-terminal domain C3B79_2204 PF01386 Ribosomal L25p family C3B79_2205 PF00512 His Kinase A (phospho-acceptor) domain C3B79_2205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_2205 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C3B79_2205 PF00672 HAMP domain C3B79_2205 PF00072 Response regulator receiver domain C3B79_2205 PF01627 Hpt domain C3B79_2207 PF00072 Response regulator receiver domain C3B79_2208 PF00753 Metallo-beta-lactamase superfamily C3B79_2210 PF00586 AIR synthase related protein, N-terminal domain C3B79_2210 PF02769 AIR synthase related protein, C-terminal domain C3B79_2213 PF17785 PUA-like domain C3B79_2213 PF10672 S-adenosylmethionine-dependent methyltransferase C3B79_2214 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_2214 PF02743 Cache domain C3B79_2214 PF00672 HAMP domain C3B79_2215 PF00708 Acylphosphatase C3B79_2216 PF02798 Glutathione S-transferase, N-terminal domain C3B79_2216 PF00043 Glutathione S-transferase, C-terminal domain C3B79_2217 PF08264 Anticodon-binding domain of tRNA C3B79_2217 PF01588 Putative tRNA binding domain C3B79_2217 PF09334 tRNA synthetases class I (M) C3B79_2219 PF10609 NUBPL iron-transfer P-loop NTPase C3B79_2220 PF00485 Phosphoribulokinase / Uridine kinase family C3B79_2221 PF00692 dUTPase C3B79_2222 PF01384 Phosphate transporter family C3B79_2223 PF10150 Ribonuclease E/G family C3B79_2223 PF00575 S1 RNA binding domain C3B79_2223 PF12111 Polyribonucleotide phosphorylase C terminal C3B79_2225 PF01479 S4 domain C3B79_2225 PF00849 RNA pseudouridylate synthase C3B79_2226 PF13419 Haloacid dehalogenase-like hydrolase C3B79_2227 PF02545 Maf-like protein C3B79_2228 PF07690 Major Facilitator Superfamily C3B79_2229 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_2229 PF03466 LysR substrate binding domain C3B79_2232 PF02620 Large ribosomal RNA subunit accumulation protein YceD C3B79_2233 PF01783 Ribosomal L32p protein family C3B79_2234 PF02504 Fatty acid synthesis protein C3B79_2235 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C3B79_2235 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C3B79_2236 PF00698 Acyl transferase domain C3B79_2238 PF00550 Phosphopantetheine attachment site C3B79_2239 PF02801 Beta-ketoacyl synthase, C-terminal domain C3B79_2239 PF00109 Beta-ketoacyl synthase, N-terminal domain C3B79_2240 PF01063 Amino-transferase class IV C3B79_2241 PF02618 YceG-like family C3B79_2242 PF02223 Thymidylate kinase C3B79_2243 PF09115 DNA polymerase III, delta subunit, C terminal C3B79_2244 PF01026 TatD related DNase C3B79_2246 PF00589 Phage integrase family C3B79_2248 PF01189 16S rRNA methyltransferase RsmB/F C3B79_2248 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF C3B79_2248 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF C3B79_2249 PF02470 MlaD protein C3B79_2250 PF04403 Paraquat-inducible protein A C3B79_2253 PF00285 Citrate synthase, C-terminal domain C3B79_2255 PF03972 MmgE/PrpD family C3B79_2259 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain C3B79_2259 PF06974 Protein of unknown function (DUF1298) C3B79_2260 PF06974 Protein of unknown function (DUF1298) C3B79_2260 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain C3B79_2265 PF00106 short chain dehydrogenase C3B79_2267 PF07130 YebG protein C3B79_2270 PF13654 AAA domain C3B79_2270 PF05362 Lon protease (S16) C-terminal proteolytic domain C3B79_2271 PF07977 FabA-like domain C3B79_2272 PF04957 Ribosome modulation factor C3B79_2276 PF10672 S-adenosylmethionine-dependent methyltransferase C3B79_2276 PF02926 THUMP domain C3B79_2276 PF01170 Putative RNA methylase family UPF0020 C3B79_2277 PF07126 Cell-division protein ZapC C3B79_2278 PF01180 Dihydroorotate dehydrogenase C3B79_2279 PF05088 Bacterial NAD-glutamate dehydrogenase C3B79_2281 PF11940 Domain of unknown function (DUF3458) Ig-like fold C3B79_2281 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C3B79_2281 PF01433 Peptidase family M1 domain C3B79_2282 PF03572 Peptidase family S41 C3B79_2282 PF00595 PDZ domain C3B79_2282 PF17804 Tail specific protease N-terminal domain C3B79_2282 PF11818 C-terminal domain of tail specific protease (DUF3340) C3B79_2283 PF04352 ProQ/FINO family C3B79_2283 PF17516 ProQ C-terminal domain C3B79_2284 PF13185 GAF domain C3B79_2287 PF00115 Cytochrome C and Quinol oxidase polypeptide I C3B79_2290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C3B79_2290 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C3B79_2292 PF00403 Heavy-metal-associated domain C3B79_2296 PF00027 Cyclic nucleotide-binding domain C3B79_2296 PF13545 Crp-like helix-turn-helix domain C3B79_2297 PF00582 Universal stress protein family C3B79_2298 PF01171 PP-loop family C3B79_2301 PF13417 Glutathione S-transferase, N-terminal domain C3B79_2302 PF05025 RbsD / FucU transport protein family C3B79_2303 PF00005 ABC transporter C3B79_2304 PF02653 Branched-chain amino acid transport system / permease component C3B79_2305 PF13407 Periplasmic binding protein domain C3B79_2306 PF00294 pfkB family carbohydrate kinase C3B79_2307 PF00356 Bacterial regulatory proteins, lacI family C3B79_2308 PF17152 Periplasmic sensor domain C3B79_2308 PF00990 Diguanylate cyclase, GGDEF domain C3B79_2310 PF02146 Sir2 family C3B79_2313 PF00512 His Kinase A (phospho-acceptor) domain C3B79_2313 PF09456 RcsC Alpha-Beta-Loop (ABL) C3B79_2313 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_2313 PF00072 Response regulator receiver domain C3B79_2315 PF00216 Bacterial DNA-binding protein C3B79_2316 PF01588 Putative tRNA binding domain C3B79_2316 PF03147 Ferredoxin-fold anticodon binding domain C3B79_2316 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C3B79_2316 PF03484 tRNA synthetase B5 domain C3B79_2316 PF03483 B3/4 domain C3B79_2317 PF01409 tRNA synthetases class II core domain (F) C3B79_2317 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C3B79_2318 PF00453 Ribosomal protein L20 C3B79_2319 PF01632 Ribosomal protein L35 C3B79_2320 PF05198 Translation initiation factor IF-3, N-terminal domain C3B79_2320 PF00707 Translation initiation factor IF-3, C-terminal domain C3B79_2321 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3B79_2321 PF03129 Anticodon binding domain C3B79_2321 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C3B79_2321 PF02824 TGS domain C3B79_2325 PF04055 Radical SAM superfamily C3B79_2326 PF03989 DNA gyrase C-terminal domain, beta-propeller C3B79_2326 PF00521 DNA gyrase/topoisomerase IV, subunit A C3B79_2328 PF13419 Haloacid dehalogenase-like hydrolase C3B79_2330 PF00317 Ribonucleotide reductase, all-alpha domain C3B79_2330 PF02867 Ribonucleotide reductase, barrel domain C3B79_2330 PF03477 ATP cone domain C3B79_2331 PF00268 Ribonucleotide reductase, small chain C3B79_2332 PF00111 2Fe-2S iron-sulfur cluster binding domain C3B79_2333 PF03562 MltA specific insert domain C3B79_2333 PF06725 3D domain C3B79_2334 PF06945 Protein of unknown function (DUF1289) C3B79_2336 PF03613 PTS system mannose/fructose/sorbose family IID component C3B79_2337 PF03609 PTS system sorbose-specific iic component C3B79_2338 PF03610 PTS system fructose IIA component C3B79_2338 PF03830 PTS system sorbose subfamily IIB component C3B79_2342 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C3B79_2342 PF00356 Bacterial regulatory proteins, lacI family C3B79_2343 PF06560 Glucose-6-phosphate isomerase (GPI) C3B79_2344 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3B79_2344 PF02378 Phosphotransferase system, EIIC C3B79_2345 PF00294 pfkB family carbohydrate kinase C3B79_2346 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3B79_2346 PF00381 PTS HPr component phosphorylation site C3B79_2347 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C3B79_2347 PF00356 Bacterial regulatory proteins, lacI family C3B79_2348 PF03222 Tryptophan/tyrosine permease family C3B79_2351 PF00270 DEAD/DEAH box helicase C3B79_2351 PF00271 Helicase conserved C-terminal domain C3B79_2353 PF01264 Chorismate synthase C3B79_2354 PF05175 Methyltransferase small domain C3B79_2355 PF01713 Smr domain C3B79_2357 PF08448 PAS fold C3B79_2357 PF00990 Diguanylate cyclase, GGDEF domain C3B79_2361 PF08329 Chitinase A, N-terminal domain C3B79_2361 PF00704 Glycosyl hydrolases family 18 C3B79_2364 PF03831 PhnA domain C3B79_2364 PF08274 PhnA Zinc-Ribbon C3B79_2369 PF02567 Phenazine biosynthesis-like protein C3B79_2375 PF01327 Polypeptide deformylase C3B79_2378 PF03330 Lytic transglycolase C3B79_2378 PF05036 Sporulation related domain C3B79_2379 PF16330 MukB hinge domain C3B79_2379 PF04310 MukB N-terminal C3B79_2380 PF04288 MukE-like family C3B79_2381 PF17192 MukF middle domain C3B79_2381 PF17193 MukF C-terminal domain C3B79_2381 PF03882 MukF winged-helix domain C3B79_2383 PF02698 DUF218 domain C3B79_2384 PF00121 Triosephosphate isomerase C3B79_2385 PF00365 Phosphofructokinase C3B79_2387 PF01546 Peptidase family M20/M25/M40 C3B79_2387 PF07687 Peptidase dimerisation domain C3B79_2388 PF13419 Haloacid dehalogenase-like hydrolase C3B79_2389 PF00883 Cytosol aminopeptidase family, catalytic domain C3B79_2389 PF02789 Cytosol aminopeptidase family, N-terminal domain C3B79_2399 PF00128 Alpha amylase, catalytic domain C3B79_2399 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C3B79_2399 PF18390 Glycogen debranching enzyme C-terminal domain C3B79_2400 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C3B79_2400 PF00128 Alpha amylase, catalytic domain C3B79_2402 PF11398 Protein of unknown function (DUF2813) C3B79_2404 PF12833 Helix-turn-helix domain C3B79_2404 PF14525 AraC-binding-like domain C3B79_2406 PF03466 LysR substrate binding domain C3B79_2406 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_2407 PF01925 Sulfite exporter TauE/SafE C3B79_2409 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3B79_2409 PF18029 Glyoxalase-like domain C3B79_2410 PF01820 D-ala D-ala ligase N-terminus C3B79_2410 PF07478 D-ala D-ala ligase C-terminus C3B79_2412 PF00255 Glutathione peroxidase C3B79_2413 PF00271 Helicase conserved C-terminal domain C3B79_2413 PF00270 DEAD/DEAH box helicase C3B79_2414 PF13673 Acetyltransferase (GNAT) domain C3B79_2417 PF01928 CYTH domain C3B79_2419 PF00583 Acetyltransferase (GNAT) family C3B79_2420 PF00465 Iron-containing alcohol dehydrogenase C3B79_2421 PF03992 Antibiotic biosynthesis monooxygenase C3B79_2422 PF08543 Phosphomethylpyrimidine kinase C3B79_2427 PF00561 alpha/beta hydrolase fold C3B79_2427 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus C3B79_2428 PF01575 MaoC like domain C3B79_2431 PF00664 ABC transporter transmembrane region C3B79_2431 PF00005 ABC transporter C3B79_2433 PF00664 ABC transporter transmembrane region C3B79_2433 PF00005 ABC transporter C3B79_2434 PF01627 Hpt domain C3B79_2434 PF00072 Response regulator receiver domain C3B79_2434 PF00512 His Kinase A (phospho-acceptor) domain C3B79_2434 PF00672 HAMP domain C3B79_2434 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_2434 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C3B79_2435 PF00085 Thioredoxin C3B79_2436 PF00939 Sodium:sulfate symporter transmembrane region C3B79_2437 PF00343 Carbohydrate phosphorylase C3B79_2444 PF04715 Anthranilate synthase component I, N terminal region C3B79_2444 PF00425 chorismate binding enzyme C3B79_2445 PF00293 NUDIX domain C3B79_2447 PF03222 Tryptophan/tyrosine permease family C3B79_2448 PF00375 Sodium:dicarboxylate symporter family C3B79_2449 PF16124 RecQ zinc-binding C3B79_2449 PF00270 DEAD/DEAH box helicase C3B79_2449 PF00271 Helicase conserved C-terminal domain C3B79_2449 PF00570 HRDC domain C3B79_2449 PF09382 RQC domain C3B79_2450 PF08298 PrkA AAA domain C3B79_2450 PF06798 PrkA serine protein kinase C-terminal domain C3B79_2451 PF04285 Protein of unknown function (DUF444) C3B79_2452 PF04293 SpoVR like protein C3B79_2453 PF07840 FadR C-terminal domain C3B79_2453 PF00392 Bacterial regulatory proteins, gntR family C3B79_2454 PF06450 Bacterial Na+/H+ antiporter B (NhaB) C3B79_2455 PF02600 Disulfide bond formation protein DsbB C3B79_2456 PF09335 SNARE associated Golgi protein C3B79_2458 PF00271 Helicase conserved C-terminal domain C3B79_2458 PF04851 Type III restriction enzyme, res subunit C3B79_2458 PF02151 UvrB/uvrC motif C3B79_2458 PF12344 Ultra-violet resistance protein B C3B79_2458 PF17757 UvrB interaction domain C3B79_2460 PF02080 TrkA-C domain C3B79_2460 PF06826 Predicted Permease Membrane Region C3B79_2461 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3B79_2461 PF01464 Transglycosylase SLT domain C3B79_2466 PF01970 Tripartite tricarboxylate transporter TctA family C3B79_2467 PF08279 HTH domain C3B79_2467 PF12431 Transcriptional regulator C3B79_2467 PF00072 Response regulator receiver domain C3B79_2468 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C3B79_2468 PF00989 PAS fold C3B79_2468 PF17203 Single cache domain 3 C3B79_2468 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_2469 PF01047 MarR family C3B79_2469 PF00480 ROK family C3B79_2470 PF00672 HAMP domain C3B79_2470 PF17200 Single Cache domain 2 C3B79_2470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_2471 PF02810 SEC-C motif C3B79_2472 PF02810 SEC-C motif C3B79_2473 PF01266 FAD dependent oxidoreductase C3B79_2473 PF04324 BFD-like [2Fe-2S] binding domain C3B79_2474 PF00890 FAD binding domain C3B79_2475 PF02754 Cysteine-rich domain C3B79_2475 PF13183 4Fe-4S dicluster domain C3B79_2481 PF02335 Cytochrome c552 C3B79_2482 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) C3B79_2482 PF13435 Cytochrome c554 and c-prime C3B79_2483 PF13247 4Fe-4S dicluster domain C3B79_2483 PF00037 4Fe-4S binding domain C3B79_2484 PF03916 Polysulphide reductase, NrfD C3B79_2485 PF01578 Cytochrome C assembly protein C3B79_2485 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C3B79_2486 PF08534 Redoxin C3B79_2487 PF03918 Cytochrome C biogenesis protein C3B79_2489 PF00293 NUDIX domain C3B79_2490 PF00768 D-alanyl-D-alanine carboxypeptidase C3B79_2492 PF00501 AMP-binding enzyme C3B79_2492 PF13193 AMP-binding enzyme C-terminal domain C3B79_2492 PF00668 Condensation domain C3B79_2492 PF07993 Male sterility protein C3B79_2492 PF00550 Phosphopantetheine attachment site C3B79_2493 PF00550 Phosphopantetheine attachment site C3B79_2493 PF00668 Condensation domain C3B79_2493 PF13193 AMP-binding enzyme C-terminal domain C3B79_2493 PF00501 AMP-binding enzyme C3B79_2494 PF13193 AMP-binding enzyme C-terminal domain C3B79_2494 PF00550 Phosphopantetheine attachment site C3B79_2494 PF07993 Male sterility protein C3B79_2494 PF00668 Condensation domain C3B79_2494 PF00501 AMP-binding enzyme C3B79_2496 PF00668 Condensation domain C3B79_2496 PF00550 Phosphopantetheine attachment site C3B79_2496 PF00975 Thioesterase domain C3B79_2496 PF13193 AMP-binding enzyme C-terminal domain C3B79_2496 PF00501 AMP-binding enzyme C3B79_2497 PF00975 Thioesterase domain C3B79_2497 PF00550 Phosphopantetheine attachment site C3B79_2497 PF00668 Condensation domain C3B79_2497 PF13193 AMP-binding enzyme C-terminal domain C3B79_2497 PF00501 AMP-binding enzyme C3B79_2498 PF00857 Isochorismatase family C3B79_2498 PF00550 Phosphopantetheine attachment site C3B79_2499 PF00501 AMP-binding enzyme C3B79_2499 PF13193 AMP-binding enzyme C-terminal domain C3B79_2500 PF00425 chorismate binding enzyme C3B79_2501 PF07273 Protein of unknown function (DUF1439) C3B79_2503 PF00483 Nucleotidyl transferase C3B79_2504 PF03707 Bacterial signalling protein N terminal repeat C3B79_2504 PF00563 EAL domain C3B79_2504 PF00990 Diguanylate cyclase, GGDEF domain C3B79_2507 PF00294 pfkB family carbohydrate kinase C3B79_2508 PF00294 pfkB family carbohydrate kinase C3B79_2510 PF00762 Ferrochelatase C3B79_2511 PF05191 Adenylate kinase, active site lid C3B79_2512 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_2512 PF00183 Hsp90 protein C3B79_2513 PF13662 Toprim domain C3B79_2513 PF02132 RecR protein C3B79_2514 PF02634 FdhD/NarQ family C3B79_2515 PF01590 GAF domain C3B79_2515 PF00158 Sigma-54 interaction domain C3B79_2518 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C3B79_2518 PF00384 Molybdopterin oxidoreductase C3B79_2518 PF01568 Molydopterin dinucleotide binding domain C3B79_2519 PF01568 Molydopterin dinucleotide binding domain C3B79_2519 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C3B79_2519 PF00384 Molybdopterin oxidoreductase C3B79_2520 PF13247 4Fe-4S dicluster domain C3B79_2520 PF12800 4Fe-4S binding domain C3B79_2524 PF02705 K+ potassium transporter C3B79_2525 PF00037 4Fe-4S binding domain C3B79_2525 PF12798 4Fe-4S binding domain C3B79_2526 PF00361 Proton-conducting membrane transporter C3B79_2527 PF00146 NADH dehydrogenase C3B79_2528 PF00374 Nickel-dependent hydrogenase C3B79_2528 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C3B79_2528 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C3B79_2529 PF12838 4Fe-4S dicluster domain C3B79_2530 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C3B79_2531 PF07450 Formate hydrogenlyase maturation protein HycH C3B79_2532 PF01750 Hydrogenase maturation protease C3B79_2533 PF01750 Hydrogenase maturation protease C3B79_2538 PF03841 L-seryl-tRNA selenium transferase C3B79_2538 PF12390 Selenocysteine synthase N terminal C3B79_2539 PF09105 Elongation factor SelB, winged helix C3B79_2539 PF09107 Elongation factor SelB, winged helix C3B79_2539 PF03144 Elongation factor Tu domain 2 C3B79_2539 PF00009 Elongation factor Tu GTP binding domain C3B79_2539 PF09106 Elongation factor SelB, winged helix C3B79_2540 PF00708 Acylphosphatase C3B79_2540 PF17788 HypF Kae1-like domain C3B79_2540 PF01300 Telomere recombination C3B79_2540 PF07503 HypF finger C3B79_2541 PF01455 HupF/HypC family C3B79_2542 PF01924 Hydrogenase formation hypA family C3B79_2543 PF00586 AIR synthase related protein, N-terminal domain C3B79_2543 PF02769 AIR synthase related protein, C-terminal domain C3B79_2544 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C3B79_2545 PF02492 CobW/HypB/UreG, nucleotide-binding domain C3B79_2546 PF08402 TOBE domain C3B79_2546 PF00005 ABC transporter C3B79_2547 PF00005 ABC transporter C3B79_2548 PF12911 N-terminal TM domain of oligopeptide transport permease C C3B79_2548 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_2549 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_2552 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE C3B79_2553 PF01750 Hydrogenase maturation protease C3B79_2554 PF00374 Nickel-dependent hydrogenase C3B79_2555 PF03916 Polysulphide reductase, NrfD C3B79_2556 PF13247 4Fe-4S dicluster domain C3B79_2557 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal C3B79_2557 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C3B79_2559 PF00072 Response regulator receiver domain C3B79_2561 PF01584 CheW-like domain C3B79_2561 PF07194 P2 response regulator binding domain C3B79_2561 PF02895 Signal transducing histidine kinase, homodimeric domain C3B79_2561 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_2561 PF01627 Hpt domain C3B79_2562 PF01627 Hpt domain C3B79_2562 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_2562 PF01584 CheW-like domain C3B79_2562 PF07194 P2 response regulator binding domain C3B79_2562 PF02895 Signal transducing histidine kinase, homodimeric domain C3B79_2563 PF00672 HAMP domain C3B79_2563 PF12729 Four helix bundle sensory module for signal transduction C3B79_2563 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_2564 PF01584 CheW-like domain C3B79_2565 PF03705 CheR methyltransferase, all-alpha domain C3B79_2565 PF01739 CheR methyltransferase, SAM binding domain C3B79_2566 PF00072 Response regulator receiver domain C3B79_2566 PF01339 CheB methylesterase C3B79_2567 PF00072 Response regulator receiver domain C3B79_2567 PF01339 CheB methylesterase C3B79_2568 PF03707 Bacterial signalling protein N terminal repeat C3B79_2568 PF00563 EAL domain C3B79_2568 PF00990 Diguanylate cyclase, GGDEF domain C3B79_2569 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_2569 PF00672 HAMP domain C3B79_2569 PF12729 Four helix bundle sensory module for signal transduction C3B79_2570 PF01168 Alanine racemase, N-terminal domain C3B79_2570 PF00842 Alanine racemase, C-terminal domain C3B79_2571 PF00842 Alanine racemase, C-terminal domain C3B79_2571 PF01168 Alanine racemase, N-terminal domain C3B79_2575 PF01740 STAS domain C3B79_2575 PF00916 Sulfate permease family C3B79_2578 PF03350 Uncharacterized protein family, UPF0114 C3B79_2581 PF03239 Iron permease FTR1 family C3B79_2582 PF01593 Flavin containing amine oxidoreductase C3B79_2585 PF07690 Major Facilitator Superfamily C3B79_2587 PF00005 ABC transporter C3B79_2588 PF00005 ABC transporter C3B79_2597 PF01565 FAD binding domain C3B79_2597 PF02913 FAD linked oxidases, C-terminal domain C3B79_2598 PF11870 Domain of unknown function (DUF3390) C3B79_2598 PF02589 LUD domain C3B79_2598 PF13183 4Fe-4S dicluster domain C3B79_2599 PF02754 Cysteine-rich domain C3B79_2601 PF02652 L-lactate permease C3B79_2602 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_2602 PF03466 LysR substrate binding domain C3B79_2604 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3B79_2605 PF00561 alpha/beta hydrolase fold C3B79_2609 PF00816 H-NS histone family C3B79_2641 PF01625 Peptide methionine sulfoxide reductase C3B79_2642 PF00696 Amino acid kinase family C3B79_2642 PF00583 Acetyltransferase (GNAT) family C3B79_2643 PF00696 Amino acid kinase family C3B79_2643 PF01842 ACT domain C3B79_2647 PF00884 Sulfatase C3B79_2648 PF17676 LD-carboxypeptidase C-terminal domain C3B79_2648 PF02016 LD-carboxypeptidase N-terminal domain C3B79_2649 PF01734 Patatin-like phospholipase C3B79_2651 PF17179 4Fe-4S dicluster domain C3B79_2652 PF00175 Oxidoreductase NAD-binding domain C3B79_2652 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B C3B79_2653 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C3B79_2653 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C3B79_2653 PF13187 4Fe-4S dicluster domain C3B79_2654 PF10414 Sirohaem synthase dimerisation region C3B79_2654 PF14824 Sirohaem biosynthesis protein central C3B79_2654 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3B79_2657 PF01906 Putative heavy-metal-binding C3B79_2661 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3B79_2662 PF05728 Uncharacterised protein family (UPF0227) C3B79_2664 PF00860 Permease family C3B79_2665 PF08439 Oligopeptidase F C3B79_2665 PF01432 Peptidase family M3 C3B79_2667 PF01432 Peptidase family M3 C3B79_2667 PF08439 Oligopeptidase F C3B79_2668 PF05661 Protein of unknown function (DUF808) C3B79_2671 PF02355 Protein export membrane protein C3B79_2671 PF07549 SecD/SecF GG Motif C3B79_2672 PF02355 Protein export membrane protein C3B79_2672 PF07549 SecD/SecF GG Motif C3B79_2672 PF13721 SecD export protein N-terminal TM region C3B79_2679 PF01230 HIT domain C3B79_2680 PF00672 HAMP domain C3B79_2680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_2682 PF01979 Amidohydrolase family C3B79_2685 PF00375 Sodium:dicarboxylate symporter family C3B79_2688 PF01168 Alanine racemase, N-terminal domain C3B79_2688 PF00842 Alanine racemase, C-terminal domain C3B79_2689 PF03741 Integral membrane protein TerC family C3B79_2690 PF00005 ABC transporter C3B79_2690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3B79_2692 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3B79_2692 PF00005 ABC transporter C3B79_2693 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_2693 PF12911 N-terminal TM domain of oligopeptide transport permease C C3B79_2694 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_2695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3B79_2696 PF01914 MarC family integral membrane protein C3B79_2698 PF00465 Iron-containing alcohol dehydrogenase C3B79_2698 PF00171 Aldehyde dehydrogenase family C3B79_2699 PF01966 HD domain C3B79_2701 PF07694 5TMR of 5TMR-LYT C3B79_2701 PF06580 Histidine kinase C3B79_2702 PF00072 Response regulator receiver domain C3B79_2702 PF04397 LytTr DNA-binding domain C3B79_2703 PF02554 Carbon starvation protein CstA C3B79_2704 PF11742 Protein of unknown function (DUF3302) C3B79_2705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C3B79_2705 PF00529 HlyD membrane-fusion protein of T1SS C3B79_2707 PF04851 Type III restriction enzyme, res subunit C3B79_2707 PF00271 Helicase conserved C-terminal domain C3B79_2708 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family C3B79_2709 PF00462 Glutaredoxin C3B79_2711 PF00155 Aminotransferase class I and II C3B79_2724 PF01548 Transposase C3B79_2724 PF02371 Transposase IS116/IS110/IS902 family C3B79_2728 PF07411 Domain of unknown function (DUF1508) C3B79_2729 PF03606 C4-dicarboxylate anaerobic carrier C3B79_2730 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C3B79_2730 PF07055 Enoyl reductase FAD binding domain C3B79_2730 PF12241 Trans-2-enoyl-CoA reductase catalytic region C3B79_2731 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_2731 PF13426 PAS domain C3B79_2731 PF08447 PAS fold C3B79_2733 PF00892 EamA-like transporter family C3B79_2734 PF02508 Rnf-Nqr subunit, membrane protein C3B79_2735 PF04060 Putative Fe-S cluster C3B79_2736 PF13375 RnfC Barrel sandwich hybrid domain C3B79_2736 PF12838 4Fe-4S dicluster domain C3B79_2736 PF10531 SLBB domain C3B79_2736 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C3B79_2737 PF13375 RnfC Barrel sandwich hybrid domain C3B79_2737 PF13237 4Fe-4S dicluster domain C3B79_2737 PF10531 SLBB domain C3B79_2737 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C3B79_2738 PF03116 NQR2, RnfD, RnfE family C3B79_2739 PF04205 FMN-binding domain C3B79_2740 PF02508 Rnf-Nqr subunit, membrane protein C3B79_2741 PF00633 Helix-hairpin-helix motif C3B79_2741 PF10576 Iron-sulfur binding domain of endonuclease III C3B79_2741 PF00730 HhH-GPD superfamily base excision DNA repair protein C3B79_2742 PF00730 HhH-GPD superfamily base excision DNA repair protein C3B79_2742 PF00633 Helix-hairpin-helix motif C3B79_2742 PF10576 Iron-sulfur binding domain of endonuclease III C3B79_2743 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3B79_2744 PF00691 OmpA family C3B79_2744 PF18393 MotY N-terminal domain C3B79_2745 PF12729 Four helix bundle sensory module for signal transduction C3B79_2745 PF00672 HAMP domain C3B79_2745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_2746 PF00929 Exonuclease C3B79_2747 PF13726 Na+-H+ antiporter family C3B79_2747 PF03553 Na+/H+ antiporter family C3B79_2748 PF00270 DEAD/DEAH box helicase C3B79_2748 PF03880 DbpA RNA binding domain C3B79_2748 PF00271 Helicase conserved C-terminal domain C3B79_2749 PF03061 Thioesterase superfamily C3B79_2751 PF01565 FAD binding domain C3B79_2751 PF13183 4Fe-4S dicluster domain C3B79_2751 PF02913 FAD linked oxidases, C-terminal domain C3B79_2753 PF03741 Integral membrane protein TerC family C3B79_2753 PF03471 Transporter associated domain C3B79_2754 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3B79_2755 PF00962 Adenosine/AMP deaminase C3B79_2756 PF13344 Haloacid dehalogenase-like hydrolase C3B79_2757 PF02254 TrkA-N domain C3B79_2757 PF00999 Sodium/hydrogen exchanger family C3B79_2759 PF13537 Glutamine amidotransferase domain C3B79_2759 PF00733 Asparagine synthase C3B79_2761 PF00043 Glutathione S-transferase, C-terminal domain C3B79_2761 PF13417 Glutathione S-transferase, N-terminal domain C3B79_2762 PF14497 Glutathione S-transferase, C-terminal domain C3B79_2762 PF02798 Glutathione S-transferase, N-terminal domain C3B79_2764 PF04209 homogentisate 1,2-dioxygenase C3B79_2766 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3B79_2768 PF00849 RNA pseudouridylate synthase C3B79_2769 PF00563 EAL domain C3B79_2769 PF13426 PAS domain C3B79_2769 PF00990 Diguanylate cyclase, GGDEF domain C3B79_2770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_2770 PF00672 HAMP domain C3B79_2771 PF08447 PAS fold C3B79_2771 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_2773 PF09924 Uncharacterised conserved protein (DUF2156) C3B79_2773 PF03706 Lysylphosphatidylglycerol synthase TM region C3B79_2774 PF00884 Sulfatase C3B79_2774 PF08019 Phosphoethanolamine transferase EptA/EptB C3B79_2780 PF01027 Inhibitor of apoptosis-promoting Bax1 C3B79_2781 PF12805 FUSC-like inner membrane protein yccS C3B79_2782 PF04358 DsrC like protein C3B79_2783 PF05036 Sporulation related domain C3B79_2784 PF02875 Mur ligase family, glutamate ligase domain C3B79_2784 PF08245 Mur ligase middle domain C3B79_2785 PF01039 Carboxyl transferase domain C3B79_2785 PF17848 Acetyl-coA carboxylase zinc finger domain C3B79_2786 PF01416 tRNA pseudouridine synthase C3B79_2789 PF02774 Semialdehyde dehydrogenase, dimerisation domain C3B79_2789 PF01118 Semialdehyde dehydrogenase, NAD binding domain C3B79_2790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3B79_2790 PF11890 Domain of unknown function (DUF3410) C3B79_2790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3B79_2791 PF01569 PAP2 superfamily C3B79_2792 PF03180 NLPA lipoprotein C3B79_2794 PF01483 Proprotein convertase P-domain C3B79_2794 PF00082 Subtilase family C3B79_2796 PF01915 Glycosyl hydrolase family 3 C-terminal domain C3B79_2796 PF14310 Fibronectin type III-like domain C3B79_2796 PF00933 Glycosyl hydrolase family 3 N terminal domain C3B79_2798 PF00391 PEP-utilising enzyme, mobile domain C3B79_2798 PF02896 PEP-utilising enzyme, TIM barrel domain C3B79_2798 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C3B79_2799 PF03618 Kinase/pyrophosphorylase C3B79_2801 PF00324 Amino acid permease C3B79_2809 PF00005 ABC transporter C3B79_2810 PF03412 Peptidase C39 family C3B79_2810 PF00664 ABC transporter transmembrane region C3B79_2810 PF00005 ABC transporter C3B79_2811 PF00664 ABC transporter transmembrane region C3B79_2811 PF03412 Peptidase C39 family C3B79_2811 PF00005 ABC transporter C3B79_2812 PF04055 Radical SAM superfamily C3B79_2812 PF16199 Radical_SAM C-terminal domain C3B79_2814 PF00310 Glutamine amidotransferases class-II C3B79_2814 PF01493 GXGXG motif C3B79_2814 PF04898 Glutamate synthase central domain C3B79_2814 PF01645 Conserved region in glutamate synthase C3B79_2815 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3B79_2815 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C3B79_2817 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_2818 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3B79_2821 PF00376 MerR family regulatory protein C3B79_2821 PF09278 MerR, DNA binding C3B79_2824 PF14521 Lysine-specific metallo-endopeptidase C3B79_2826 PF00271 Helicase conserved C-terminal domain C3B79_2826 PF00270 DEAD/DEAH box helicase C3B79_2827 PF13302 Acetyltransferase (GNAT) domain C3B79_2833 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3B79_2834 PF07759 Protein of unknown function (DUF1615) C3B79_2835 PF00682 HMGL-like C3B79_2835 PF08502 LeuA allosteric (dimerisation) domain C3B79_2836 PF00682 HMGL-like C3B79_2836 PF08502 LeuA allosteric (dimerisation) domain C3B79_2837 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3B79_2837 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C3B79_2837 PF02142 MGS-like domain C3B79_2838 PF00117 Glutamine amidotransferase class-I C3B79_2838 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C3B79_2839 PF01113 Dihydrodipicolinate reductase, N-terminus C3B79_2839 PF05173 Dihydrodipicolinate reductase, C-terminus C3B79_2843 PF01812 5-formyltetrahydrofolate cyclo-ligase family C3B79_2844 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C3B79_2845 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C3B79_2846 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3B79_2846 PF01842 ACT domain C3B79_2846 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3B79_2847 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3B79_2847 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3B79_2848 PF01219 Prokaryotic diacylglycerol kinase C3B79_2849 PF00793 DAHP synthetase I family C3B79_2850 PF00583 Acetyltransferase (GNAT) family C3B79_2851 PF00005 ABC transporter C3B79_2852 PF01032 FecCD transport family C3B79_2853 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_2853 PF00072 Response regulator receiver domain C3B79_2853 PF01627 Hpt domain C3B79_2853 PF00512 His Kinase A (phospho-acceptor) domain C3B79_2853 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3B79_2853 PF00989 PAS fold C3B79_2855 PF00437 Type II/IV secretion system protein C3B79_2856 PF00483 Nucleotidyl transferase C3B79_2860 PF07664 Ferrous iron transport protein B C terminus C3B79_2860 PF07670 Nucleoside recognition C3B79_2860 PF02421 Ferrous iron transport protein B C3B79_2862 PF01253 Translation initiation factor SUI1 C3B79_2863 PF01169 Uncharacterized protein family UPF0016 C3B79_2869 PF13185 GAF domain C3B79_2869 PF00990 Diguanylate cyclase, GGDEF domain C3B79_2872 PF06470 SMC proteins Flexible Hinge Domain C3B79_2872 PF02463 RecF/RecN/SMC N terminal domain C3B79_2873 PF01406 tRNA synthetases class I (C) catalytic domain C3B79_2873 PF09190 DALR domain C3B79_2875 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C3B79_2877 PF00149 Calcineurin-like phosphoesterase C3B79_2878 PF03916 Polysulphide reductase, NrfD C3B79_2879 PF00037 4Fe-4S binding domain C3B79_2879 PF13247 4Fe-4S dicluster domain C3B79_2883 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) C3B79_2884 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB C3B79_2885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_2885 PF00672 HAMP domain C3B79_2886 PF13426 PAS domain C3B79_2886 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_2886 PF08447 PAS fold C3B79_2896 PF00589 Phage integrase family C3B79_2896 PF14659 Phage integrase, N-terminal SAM-like domain C3B79_2900 PF01066 CDP-alcohol phosphatidyltransferase C3B79_2901 PF08459 UvrC Helix-hairpin-helix N-terminal C3B79_2901 PF02151 UvrB/uvrC motif C3B79_2901 PF01541 GIY-YIG catalytic domain C3B79_2902 PF00072 Response regulator receiver domain C3B79_2902 PF00196 Bacterial regulatory proteins, luxR family C3B79_2903 PF02348 Cytidylyltransferase C3B79_2904 PF03966 Trm112p-like protein C3B79_2905 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C3B79_2906 PF00664 ABC transporter transmembrane region C3B79_2906 PF00005 ABC transporter C3B79_2907 PF03772 Competence protein C3B79_2907 PF00753 Metallo-beta-lactamase superfamily C3B79_2910 PF05872 Bacterial protein of unknown function (DUF853) C3B79_2911 PF00155 Aminotransferase class I and II C3B79_2913 PF13609 Gram-negative porin C3B79_2914 PF13307 Helicase C-terminal domain C3B79_2914 PF06733 DEAD_2 C3B79_2916 PF00850 Histone deacetylase domain C3B79_2917 PF07690 Major Facilitator Superfamily C3B79_2918 PF01926 50S ribosome-binding GTPase C3B79_2920 PF00245 Alkaline phosphatase C3B79_2921 PF00245 Alkaline phosphatase C3B79_2924 PF01272 Transcription elongation factor, GreA/GreB, C-term C3B79_2924 PF14760 Rnk N-terminus C3B79_2925 PF00072 Response regulator receiver domain C3B79_2925 PF00196 Bacterial regulatory proteins, luxR family C3B79_2926 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_2926 PF05231 MASE1 C3B79_2926 PF07730 Histidine kinase C3B79_2927 PF07690 Major Facilitator Superfamily C3B79_2928 PF00990 Diguanylate cyclase, GGDEF domain C3B79_2928 PF08448 PAS fold C3B79_2929 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3B79_2930 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_2931 PF00005 ABC transporter C3B79_2933 PF04116 Fatty acid hydroxylase superfamily C3B79_2934 PF13520 Amino acid permease C3B79_2935 PF00809 Pterin binding enzyme C3B79_2935 PF02607 B12 binding domain C3B79_2935 PF02574 Homocysteine S-methyltransferase C3B79_2935 PF02965 Vitamin B12 dependent methionine synthase, activation domain C3B79_2935 PF02310 B12 binding domain C3B79_2937 PF03471 Transporter associated domain C3B79_2937 PF01595 Cyclin M transmembrane N-terminal domain C3B79_2937 PF00571 CBS domain C3B79_2938 PF01895 PhoU domain C3B79_2940 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_2941 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_2942 PF14437 MafB19-like deaminase C3B79_2946 PF01274 Malate synthase C3B79_2947 PF00463 Isocitrate lyase family C3B79_2948 PF00308 Bacterial dnaA protein C3B79_2951 PF02769 AIR synthase related protein, C-terminal domain C3B79_2951 PF00586 AIR synthase related protein, N-terminal domain C3B79_2952 PF00551 Formyl transferase C3B79_2953 PF01784 NIF3 (NGG1p interacting factor 3) C3B79_2954 PF02954 Bacterial regulatory protein, Fis family C3B79_2954 PF00158 Sigma-54 interaction domain C3B79_2955 PF00072 Response regulator receiver domain C3B79_2955 PF02954 Bacterial regulatory protein, Fis family C3B79_2955 PF00158 Sigma-54 interaction domain C3B79_2956 PF00989 PAS fold C3B79_2956 PF00512 His Kinase A (phospho-acceptor) domain C3B79_2956 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_2957 PF02954 Bacterial regulatory protein, Fis family C3B79_2957 PF00072 Response regulator receiver domain C3B79_2957 PF00158 Sigma-54 interaction domain C3B79_2959 PF01842 ACT domain C3B79_2960 PF17941 Polyphosphate kinase C-terminal domain 1 C3B79_2960 PF02503 Polyphosphate kinase middle domain C3B79_2960 PF13089 Polyphosphate kinase N-terminal domain C3B79_2960 PF13090 Polyphosphate kinase C-terminal domain 2 C3B79_2961 PF02541 Ppx/GppA phosphatase family C3B79_2962 PF00571 CBS domain C3B79_2962 PF03448 MgtE intracellular N domain C3B79_2962 PF01769 Divalent cation transporter C3B79_2966 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C3B79_2966 PF10135 Rod binding protein C3B79_2967 PF02119 Flagellar P-ring protein C3B79_2968 PF02107 Flagellar L-ring protein C3B79_2969 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C3B79_2969 PF00460 Flagella basal body rod protein C3B79_2970 PF00460 Flagella basal body rod protein C3B79_2970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C3B79_2971 PF00460 Flagella basal body rod protein C3B79_2971 PF07559 Flagellar basal body protein FlaE C3B79_2971 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C3B79_2973 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C3B79_2973 PF00460 Flagella basal body rod protein C3B79_2974 PF00460 Flagella basal body rod protein C3B79_2975 PF01739 CheR methyltransferase, SAM binding domain C3B79_2975 PF03705 CheR methyltransferase, all-alpha domain C3B79_2976 PF00072 Response regulator receiver domain C3B79_2976 PF01584 CheW-like domain C3B79_2977 PF13144 Chaperone for flagella basal body P-ring formation C3B79_2980 PF12850 Calcineurin-like phosphoesterase superfamily domain C3B79_2981 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3B79_2983 PF01479 S4 domain C3B79_2983 PF00849 RNA pseudouridylate synthase C3B79_2984 PF01966 HD domain C3B79_2984 PF11871 Domain of unknown function (DUF3391) C3B79_2986 PF00923 Transaldolase/Fructose-6-phosphate aldolase C3B79_2987 PF04055 Radical SAM superfamily C3B79_2991 PF00455 DeoR C terminal sensor domain C3B79_2991 PF08220 DeoR-like helix-turn-helix domain C3B79_2992 PF00892 EamA-like transporter family C3B79_2994 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3B79_3000 PF00313 'Cold-shock' DNA-binding domain C3B79_3001 PF00364 Biotin-requiring enzyme C3B79_3001 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C3B79_3001 PF02817 e3 binding domain C3B79_3002 PF02780 Transketolase, C-terminal domain C3B79_3002 PF02779 Transketolase, pyrimidine binding domain C3B79_3003 PF00676 Dehydrogenase E1 component C3B79_3004 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family C3B79_3007 PF05472 DNA replication terminus site-binding protein (Ter protein) C3B79_3009 PF00271 Helicase conserved C-terminal domain C3B79_3009 PF04434 SWIM zinc finger C3B79_3009 PF00176 SNF2 family N-terminal domain C3B79_3010 PF04337 Protein of unknown function, DUF480 C3B79_3013 PF06082 Exopolysaccharide biosynthesis protein YbjH C3B79_3014 PF06251 Capsule biosynthesis GfcC C3B79_3015 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF C3B79_3017 PF02706 Chain length determinant protein C3B79_3017 PF13614 AAA domain C3B79_3017 PF13807 G-rich domain on putative tyrosine kinase C3B79_3018 PF01451 Low molecular weight phosphotyrosine protein phosphatase C3B79_3019 PF18412 Outer-membrane lipoprotein Wza C-terminal domain C3B79_3019 PF10531 SLBB domain C3B79_3019 PF02563 Polysaccharide biosynthesis/export protein C3B79_3020 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C3B79_3020 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C3B79_3020 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C3B79_3021 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C3B79_3021 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C3B79_3021 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C3B79_3021 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C3B79_3022 PF00483 Nucleotidyl transferase C3B79_3022 PF01050 Mannose-6-phosphate isomerase C3B79_3023 PF01370 NAD dependent epimerase/dehydratase family C3B79_3024 PF00534 Glycosyl transferases group 1 C3B79_3026 PF13439 Glycosyltransferase Family 4 C3B79_3026 PF00534 Glycosyl transferases group 1 C3B79_3029 PF13737 Transposase DDE domain C3B79_3030 PF00953 Glycosyl transferase family 4 C3B79_3032 PF02719 Polysaccharide biosynthesis protein C3B79_3033 PF00953 Glycosyl transferase family 4 C3B79_3034 PF01370 NAD dependent epimerase/dehydratase family C3B79_3037 PF02080 TrkA-C domain C3B79_3037 PF03600 Citrate transporter C3B79_3038 PF00009 Elongation factor Tu GTP binding domain C3B79_3039 PF01507 Phosphoadenosine phosphosulfate reductase family C3B79_3040 PF01370 NAD dependent epimerase/dehydratase family C3B79_3041 PF01370 NAD dependent epimerase/dehydratase family C3B79_3042 PF13439 Glycosyltransferase Family 4 C3B79_3042 PF00534 Glycosyl transferases group 1 C3B79_3043 PF05045 Rhamnan synthesis protein F C3B79_3043 PF14307 Glycosyltransferase WbsX C3B79_3044 PF00005 ABC transporter C3B79_3046 PF00535 Glycosyl transferase family 2 C3B79_3047 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C3B79_3048 PF00483 Nucleotidyl transferase C3B79_3049 PF04321 RmlD substrate binding domain C3B79_3050 PF16363 GDP-mannose 4,6 dehydratase C3B79_3052 PF02321 Outer membrane efflux protein C3B79_3053 PF00873 AcrB/AcrD/AcrF family C3B79_3054 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C3B79_3054 PF00529 HlyD membrane-fusion protein of T1SS C3B79_3055 PF08361 MAATS-type transcriptional repressor, C-terminal region C3B79_3055 PF00440 Bacterial regulatory proteins, tetR family C3B79_3059 PF00849 RNA pseudouridylate synthase C3B79_3059 PF01479 S4 domain C3B79_3060 PF04079 Segregation and condensation complex subunit ScpB C3B79_3061 PF02616 Segregation and condensation protein ScpA C3B79_3062 PF01300 Telomere recombination C3B79_3063 PF02811 PHP domain C3B79_3064 PF00425 chorismate binding enzyme C3B79_3064 PF04715 Anthranilate synthase component I, N terminal region C3B79_3065 PF00591 Glycosyl transferase family, a/b domain C3B79_3065 PF02885 Glycosyl transferase family, helical bundle domain C3B79_3065 PF00117 Glutamine amidotransferase class-I C3B79_3066 PF00591 Glycosyl transferase family, a/b domain C3B79_3066 PF02885 Glycosyl transferase family, helical bundle domain C3B79_3067 PF02885 Glycosyl transferase family, helical bundle domain C3B79_3067 PF00591 Glycosyl transferase family, a/b domain C3B79_3068 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C3B79_3068 PF00218 Indole-3-glycerol phosphate synthase C3B79_3069 PF00291 Pyridoxal-phosphate dependent enzyme C3B79_3070 PF00290 Tryptophan synthase alpha chain C3B79_3075 PF13592 Winged helix-turn helix C3B79_3075 PF13358 DDE superfamily endonuclease C3B79_3076 PF02108 Flagellar assembly protein FliH C3B79_3077 PF06578 YOP proteins translocation protein K (YscK) C3B79_3078 PF01514 Secretory protein of YscJ/FliF family C3B79_3079 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI C3B79_3080 PF09025 YopR, type III needle-polymerisation regulator C3B79_3081 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) C3B79_3082 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF C3B79_3084 PF16697 Inner membrane component of T3SS, cytoplasmic domain C3B79_3084 PF16693 Inner membrane component of T3SS, periplasmic domain C3B79_3089 PF12833 Helix-turn-helix domain C3B79_3093 PF05932 Tir chaperone protein (CesT) family C3B79_3094 PF05844 YopD protein C3B79_3095 PF04888 Secretion system effector C (SseC) like family C3B79_3096 PF07720 Tetratricopeptide repeat C3B79_3097 PF04792 V antigen (LcrV) protein C3B79_3099 PF07216 LcrG protein C3B79_3100 PF09621 Type III secretion system regulator (LcrR) C3B79_3101 PF00771 FHIPEP family C3B79_3102 PF00771 FHIPEP family C3B79_3104 PF09474 Type III secretion system YscX (type_III_YscX) C3B79_3106 PF09059 TyeA C3B79_3107 PF07201 HrpJ-like domain C3B79_3108 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3B79_3108 PF18269 T3SS EscN ATPase C-terminal domain C3B79_3108 PF02874 ATP synthase alpha/beta family, beta-barrel domain C3B79_3110 PF02120 Flagellar hook-length control protein FliK C3B79_3111 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C3B79_3112 PF00813 FliP family C3B79_3113 PF00813 FliP family C3B79_3114 PF01313 Bacterial export proteins, family 3 C3B79_3115 PF01311 Bacterial export proteins, family 1 C3B79_3116 PF01312 FlhB HrpN YscU SpaS Family C3B79_3117 PF03496 ADP-ribosyltransferase exoenzyme C3B79_3119 PF13276 HTH-like domain C3B79_3119 PF00665 Integrase core domain C3B79_3120 PF01527 Transposase C3B79_3125 PF13737 Transposase DDE domain C3B79_3126 PF00005 ABC transporter C3B79_3127 PF01497 Periplasmic binding protein C3B79_3128 PF07715 TonB-dependent Receptor Plug Domain C3B79_3128 PF00593 TonB dependent receptor C3B79_3128 PF07660 Secretin and TonB N terminus short domain C3B79_3129 PF00593 TonB dependent receptor C3B79_3129 PF07715 TonB-dependent Receptor Plug Domain C3B79_3130 PF02655 ATP-grasp domain C3B79_3130 PF00206 Lyase C3B79_3131 PF04183 IucA / IucC family C3B79_3131 PF06276 Ferric iron reductase FhuF-like transporter C3B79_3133 PF04183 IucA / IucC family C3B79_3133 PF06276 Ferric iron reductase FhuF-like transporter C3B79_3134 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C3B79_3134 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C3B79_3135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_3135 PF00672 HAMP domain C3B79_3135 PF00512 His Kinase A (phospho-acceptor) domain C3B79_3136 PF00486 Transcriptional regulatory protein, C terminal C3B79_3136 PF00072 Response regulator receiver domain C3B79_3138 PF00576 HIUase/Transthyretin family C3B79_3140 PF13737 Transposase DDE domain C3B79_3142 PF02796 Helix-turn-helix domain of resolvase C3B79_3142 PF00665 Integrase core domain C3B79_3143 PF01695 IstB-like ATP binding protein C3B79_3144 PF13276 HTH-like domain C3B79_3144 PF00665 Integrase core domain C3B79_3144 PF13333 Integrase core domain C3B79_3145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_3145 PF03466 LysR substrate binding domain C3B79_3146 PF03466 LysR substrate binding domain C3B79_3146 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_3147 PF12796 Ankyrin repeats (3 copies) C3B79_3148 PF11392 Protein of unknown function (DUF2877) C3B79_3149 PF00549 CoA-ligase C3B79_3149 PF02629 CoA binding domain C3B79_3150 PF00549 CoA-ligase C3B79_3150 PF02629 CoA binding domain C3B79_3151 PF06545 Protein of unknown function (DUF1116) C3B79_3153 PF00696 Amino acid kinase family C3B79_3154 PF07969 Amidohydrolase family C3B79_3155 PF07969 Amidohydrolase family C3B79_3156 PF05598 Transposase domain (DUF772) C3B79_3156 PF01609 Transposase DDE domain C3B79_3160 PF01773 Na+ dependent nucleoside transporter N-terminus C3B79_3160 PF07670 Nucleoside recognition C3B79_3160 PF07662 Na+ dependent nucleoside transporter C-terminus C3B79_3163 PF05930 Prophage CP4-57 regulatory protein (AlpA) C3B79_3165 PF00857 Isochorismatase family C3B79_3166 PF02629 CoA binding domain C3B79_3166 PF00549 CoA-ligase C3B79_3167 PF00549 CoA-ligase C3B79_3167 PF02629 CoA binding domain C3B79_3168 PF06545 Protein of unknown function (DUF1116) C3B79_3169 PF00696 Amino acid kinase family C3B79_3172 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_3172 PF03466 LysR substrate binding domain C3B79_3181 PF04002 RadC-like JAB domain C3B79_3189 PF02613 Nitrate reductase delta subunit C3B79_3190 PF18364 Molybdopterin oxidoreductase N-terminal domain C3B79_3190 PF00384 Molybdopterin oxidoreductase C3B79_3190 PF01568 Molydopterin dinucleotide binding domain C3B79_3191 PF03264 NapC/NirT cytochrome c family, N-terminal region C3B79_3192 PF00072 Response regulator receiver domain C3B79_3192 PF00486 Transcriptional regulatory protein, C terminal C3B79_3194 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C3B79_3195 PF01627 Hpt domain C3B79_3195 PF00072 Response regulator receiver domain C3B79_3195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_3195 PF00672 HAMP domain C3B79_3195 PF00512 His Kinase A (phospho-acceptor) domain C3B79_3196 PF07690 Major Facilitator Superfamily C3B79_3197 PF07690 Major Facilitator Superfamily C3B79_3198 PF01040 UbiA prenyltransferase family C3B79_3199 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C3B79_3200 PF00510 Cytochrome c oxidase subunit III C3B79_3201 PF00115 Cytochrome C and Quinol oxidase polypeptide I C3B79_3202 PF00115 Cytochrome C and Quinol oxidase polypeptide I C3B79_3204 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C3B79_3204 PF06481 COX Aromatic Rich Motif C3B79_3206 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C3B79_3206 PF00034 Cytochrome c C3B79_3208 PF01156 Inosine-uridine preferring nucleoside hydrolase C3B79_3211 PF00127 Copper binding proteins, plastocyanin/azurin family C3B79_3212 PF02424 ApbE family C3B79_3214 PF07690 Major Facilitator Superfamily C3B79_3217 PF03372 Endonuclease/Exonuclease/phosphatase family C3B79_3218 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C3B79_3219 PF00873 AcrB/AcrD/AcrF family C3B79_3221 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C3B79_3221 PF00529 HlyD membrane-fusion protein of T1SS C3B79_3222 PF00873 AcrB/AcrD/AcrF family C3B79_3226 PF03099 Biotin/lipoate A/B protein ligase family C3B79_3226 PF10437 Bacterial lipoate protein ligase C-terminus C3B79_3227 PF03707 Bacterial signalling protein N terminal repeat C3B79_3227 PF00990 Diguanylate cyclase, GGDEF domain C3B79_3227 PF00563 EAL domain C3B79_3228 PF00873 AcrB/AcrD/AcrF family C3B79_3231 PF04143 Sulphur transport C3B79_3232 PF01022 Bacterial regulatory protein, arsR family C3B79_3236 PF02308 MgtC family C3B79_3237 PF00356 Bacterial regulatory proteins, lacI family C3B79_3237 PF13407 Periplasmic binding protein domain C3B79_3238 PF00251 Glycosyl hydrolases family 32 N-terminal domain C3B79_3238 PF08244 Glycosyl hydrolases family 32 C terminal C3B79_3239 PF00251 Glycosyl hydrolases family 32 N-terminal domain C3B79_3239 PF08244 Glycosyl hydrolases family 32 C terminal C3B79_3240 PF00367 phosphotransferase system, EIIB C3B79_3240 PF02378 Phosphotransferase system, EIIC C3B79_3241 PF00294 pfkB family carbohydrate kinase C3B79_3242 PF11471 Maltoporin periplasmic N-terminal extension C3B79_3242 PF02264 LamB porin C3B79_3243 PF00226 DnaJ domain C3B79_3243 PF01556 DnaJ C terminal domain C3B79_3243 PF00684 DnaJ central domain C3B79_3245 PF00012 Hsp70 protein C3B79_3246 PF01025 GrpE C3B79_3247 PF01513 ATP-NAD kinase C3B79_3248 PF02463 RecF/RecN/SMC N terminal domain C3B79_3249 PF02833 DHHA2 domain C3B79_3249 PF01368 DHH family C3B79_3251 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C3B79_3252 PF00005 ABC transporter C3B79_3252 PF12704 MacB-like periplasmic core domain C3B79_3252 PF02687 FtsX-like permease family C3B79_3253 PF12704 MacB-like periplasmic core domain C3B79_3253 PF00005 ABC transporter C3B79_3253 PF02687 FtsX-like permease family C3B79_3254 PF02321 Outer membrane efflux protein C3B79_3255 PF04954 Siderophore-interacting protein C3B79_3255 PF08021 Siderophore-interacting FAD-binding domain C3B79_3256 PF00793 DAHP synthetase I family C3B79_3257 PF00816 H-NS histone family C3B79_3261 PF05656 Protein of unknown function (DUF805) C3B79_3266 PF01266 FAD dependent oxidoreductase C3B79_3267 PF07883 Cupin domain C3B79_3267 PF01381 Helix-turn-helix C3B79_3269 PF00171 Aldehyde dehydrogenase family C3B79_3270 PF00202 Aminotransferase class-III C3B79_3272 PF13520 Amino acid permease C3B79_3273 PF00324 Amino acid permease C3B79_3274 PF13520 Amino acid permease C3B79_3276 PF02690 Na+/Pi-cotransporter C3B79_3277 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C3B79_3277 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3B79_3278 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C3B79_3279 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_3279 PF00512 His Kinase A (phospho-acceptor) domain C3B79_3279 PF01627 Hpt domain C3B79_3279 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3B79_3279 PF00072 Response regulator receiver domain C3B79_3279 PF00989 PAS fold C3B79_3280 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3B79_3280 PF00512 His Kinase A (phospho-acceptor) domain C3B79_3280 PF01627 Hpt domain C3B79_3280 PF00072 Response regulator receiver domain C3B79_3280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_3283 PF01048 Phosphorylase superfamily C3B79_3287 PF12848 ABC transporter C3B79_3287 PF00005 ABC transporter C3B79_3290 PF13474 SnoaL-like domain C3B79_3291 PF00291 Pyridoxal-phosphate dependent enzyme C3B79_3291 PF14821 Threonine synthase N terminus C3B79_3292 PF00288 GHMP kinases N terminal domain C3B79_3292 PF08544 GHMP kinases C terminal C3B79_3293 PF01842 ACT domain C3B79_3293 PF00696 Amino acid kinase family C3B79_3293 PF13840 ACT domain C3B79_3293 PF00742 Homoserine dehydrogenase C3B79_3293 PF03447 Homoserine dehydrogenase, NAD binding domain C3B79_3294 PF00742 Homoserine dehydrogenase C3B79_3294 PF03447 Homoserine dehydrogenase, NAD binding domain C3B79_3294 PF01842 ACT domain C3B79_3294 PF13840 ACT domain C3B79_3294 PF00696 Amino acid kinase family C3B79_3295 PF00588 SpoU rRNA Methylase family C3B79_3296 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) C3B79_3299 PF03737 Aldolase/RraA C3B79_3301 PF00072 Response regulator receiver domain C3B79_3301 PF00486 Transcriptional regulatory protein, C terminal C3B79_3304 PF00664 ABC transporter transmembrane region C3B79_3304 PF00005 ABC transporter C3B79_3305 PF00664 ABC transporter transmembrane region C3B79_3305 PF00005 ABC transporter C3B79_3309 PF18389 TrmO C-terminal domain C3B79_3309 PF01980 tRNA-methyltransferase O C3B79_3310 PF00672 HAMP domain C3B79_3310 PF01966 HD domain C3B79_3311 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C3B79_3311 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C3B79_3313 PF00004 ATPase family associated with various cellular activities (AAA) C3B79_3313 PF02861 Clp amino terminal domain, pathogenicity island component C3B79_3313 PF07724 AAA domain (Cdc48 subfamily) C3B79_3313 PF17871 AAA lid domain C3B79_3313 PF10431 C-terminal, D2-small domain, of ClpB protein C3B79_3314 PF00291 Pyridoxal-phosphate dependent enzyme C3B79_3315 PF00381 PTS HPr component phosphorylation site C3B79_3316 PF05524 PEP-utilising enzyme, N-terminal C3B79_3316 PF02896 PEP-utilising enzyme, TIM barrel domain C3B79_3316 PF00391 PEP-utilising enzyme, mobile domain C3B79_3317 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3B79_3318 PF00072 Response regulator receiver domain C3B79_3318 PF00990 Diguanylate cyclase, GGDEF domain C3B79_3320 PF01292 Prokaryotic cytochrome b561 C3B79_3323 PF00149 Calcineurin-like phosphoesterase C3B79_3323 PF12320 Type 5 capsule protein repressor C-terminal domain C3B79_3326 PF04381 Putative exonuclease, RdgC C3B79_3329 PF00999 Sodium/hydrogen exchanger family C3B79_3329 PF02254 TrkA-N domain C3B79_3330 PF04151 Bacterial pre-peptidase C-terminal domain C3B79_3330 PF04389 Peptidase family M28 C3B79_3332 PF02887 Pyruvate kinase, alpha/beta domain C3B79_3332 PF00224 Pyruvate kinase, barrel domain C3B79_3333 PF12794 Mechanosensitive ion channel inner membrane domain 1 C3B79_3333 PF12795 Mechanosensitive ion channel porin domain C3B79_3333 PF00924 Mechanosensitive ion channel C3B79_3335 PF10282 Lactonase, 7-bladed beta-propeller C3B79_3336 PF00860 Permease family C3B79_3338 PF16998 17 kDa outer membrane surface antigen C3B79_3338 PF05433 Glycine zipper 2TM domain C3B79_3339 PF00390 Malic enzyme, N-terminal domain C3B79_3339 PF03949 Malic enzyme, NAD binding domain C3B79_3341 PF00072 Response regulator receiver domain C3B79_3344 PF13247 4Fe-4S dicluster domain C3B79_3346 PF12838 4Fe-4S dicluster domain C3B79_3346 PF00384 Molybdopterin oxidoreductase C3B79_3346 PF01568 Molydopterin dinucleotide binding domain C3B79_3346 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C3B79_3346 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C3B79_3355 PF02634 FdhD/NarQ family C3B79_3356 PF12728 Helix-turn-helix domain C3B79_3356 PF12727 PBP superfamily domain C3B79_3357 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_3357 PF00512 His Kinase A (phospho-acceptor) domain C3B79_3357 PF00989 PAS fold C3B79_3358 PF02954 Bacterial regulatory protein, Fis family C3B79_3358 PF00072 Response regulator receiver domain C3B79_3358 PF00158 Sigma-54 interaction domain C3B79_3359 PF12849 PBP superfamily domain C3B79_3360 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_3361 PF00005 ABC transporter C3B79_3362 PF12804 MobA-like NTP transferase domain C3B79_3363 PF00994 Probable molybdopterin binding domain C3B79_3363 PF03453 MoeA N-terminal region (domain I and II) C3B79_3363 PF03454 MoeA C-terminal region (domain IV) C3B79_3364 PF04632 Fusaric acid resistance protein family C3B79_3366 PF08447 PAS fold C3B79_3366 PF13426 PAS domain C3B79_3366 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_3370 PF05114 Protein of unknown function (DUF692) C3B79_3372 PF10725 Protein of unknown function (DUF2517) C3B79_3376 PF00512 His Kinase A (phospho-acceptor) domain C3B79_3376 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_3376 PF00672 HAMP domain C3B79_3376 PF01627 Hpt domain C3B79_3376 PF00072 Response regulator receiver domain C3B79_3376 PF17149 Periplasmic sensor domain found in signal transduction proteins C3B79_3377 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_3377 PF00512 His Kinase A (phospho-acceptor) domain C3B79_3378 PF00072 Response regulator receiver domain C3B79_3378 PF00486 Transcriptional regulatory protein, C terminal C3B79_3380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3B79_3381 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_3382 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_3382 PF12911 N-terminal TM domain of oligopeptide transport permease C C3B79_3383 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3B79_3383 PF00005 ABC transporter C3B79_3384 PF00005 ABC transporter C3B79_3384 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3B79_3385 PF01869 BadF/BadG/BcrA/BcrD ATPase family C3B79_3387 PF02838 Glycosyl hydrolase family 20, domain 2 C3B79_3387 PF00728 Glycosyl hydrolase family 20, catalytic domain C3B79_3388 PF02838 Glycosyl hydrolase family 20, domain 2 C3B79_3388 PF00728 Glycosyl hydrolase family 20, catalytic domain C3B79_3389 PF08447 PAS fold C3B79_3389 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_3392 PF01131 DNA topoisomerase C3B79_3392 PF01751 Toprim domain C3B79_3392 PF01396 Topoisomerase DNA binding C4 zinc finger C3B79_3392 PF08272 Topoisomerase I zinc-ribbon-like C3B79_3393 PF04996 Succinylarginine dihydrolase C3B79_3394 PF01343 Peptidase family S49 C3B79_3394 PF08496 Peptidase family S49 N-terminal C3B79_3395 PF00106 short chain dehydrogenase C3B79_3396 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_3396 PF03466 LysR substrate binding domain C3B79_3397 PF07690 Major Facilitator Superfamily C3B79_3398 PF00155 Aminotransferase class I and II C3B79_3401 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_3401 PF03466 LysR substrate binding domain C3B79_3404 PF01161 Phosphatidylethanolamine-binding protein C3B79_3407 PF01204 Trehalase C3B79_3408 PF01204 Trehalase C3B79_3409 PF00579 tRNA synthetases class I (W and Y) C3B79_3410 PF08525 Opacity-associated protein A N-terminal motif C3B79_3410 PF01476 LysM domain C3B79_3410 PF01551 Peptidase family M23 C3B79_3412 PF03702 Anhydro-N-acetylmuramic acid kinase C3B79_3413 PF01965 DJ-1/PfpI family C3B79_3415 PF01042 Endoribonuclease L-PSP C3B79_3417 PF02780 Transketolase, C-terminal domain C3B79_3417 PF02779 Transketolase, pyrimidine binding domain C3B79_3417 PF00456 Transketolase, thiamine diphosphate binding domain C3B79_3418 PF00438 S-adenosylmethionine synthetase, N-terminal domain C3B79_3418 PF02773 S-adenosylmethionine synthetase, C-terminal domain C3B79_3418 PF02772 S-adenosylmethionine synthetase, central domain C3B79_3419 PF17283 SprT-like zinc ribbon domain C3B79_3419 PF10263 SprT-like family C3B79_3420 PF04231 Endonuclease I C3B79_3421 PF04452 RNA methyltransferase C3B79_3422 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C3B79_3422 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C3B79_3423 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C3B79_3423 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C3B79_3424 PF00672 HAMP domain C3B79_3424 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_3426 PF00672 HAMP domain C3B79_3426 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_3426 PF12729 Four helix bundle sensory module for signal transduction C3B79_3427 PF02622 Uncharacterized ACR, COG1678 C3B79_3428 PF03652 Holliday junction resolvase C3B79_3429 PF00854 POT family C3B79_3431 PF00144 Beta-lactamase C3B79_3432 PF17863 AAA lid domain C3B79_3432 PF07726 ATPase family associated with various cellular activities (AAA) C3B79_3434 PF01841 Transglutaminase-like superfamily C3B79_3434 PF13559 Domain of unknown function (DUF4129) C3B79_3434 PF11992 Domain of unknown function (DUF3488) C3B79_3436 PF01235 Sodium:alanine symporter family C3B79_3438 PF00923 Transaldolase/Fructose-6-phosphate aldolase C3B79_3441 PF03167 Uracil DNA glycosylase superfamily C3B79_3443 PF01228 Glycine radical C3B79_3444 PF00375 Sodium:dicarboxylate symporter family C3B79_3445 PF00793 DAHP synthetase I family C3B79_3446 PF13369 Transglutaminase-like superfamily C3B79_3448 PF13847 Methyltransferase domain C3B79_3448 PF17827 PrmC N-terminal domain C3B79_3449 PF00472 RF-1 domain C3B79_3449 PF03462 PCRF domain C3B79_3450 PF01488 Shikimate / quinate 5-dehydrogenase C3B79_3450 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C3B79_3450 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C3B79_3451 PF03550 Outer membrane lipoprotein LolB C3B79_3454 PF14572 Phosphoribosyl synthetase-associated domain C3B79_3454 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C3B79_3455 PF00149 Calcineurin-like phosphoesterase C3B79_3455 PF02872 5'-nucleotidase, C-terminal domain C3B79_3456 PF01195 Peptidyl-tRNA hydrolase C3B79_3457 PF06071 Protein of unknown function (DUF933) C3B79_3457 PF01926 50S ribosome-binding GTPase C3B79_3466 PF02080 TrkA-C domain C3B79_3466 PF03600 Citrate transporter C3B79_3467 PF04973 Nicotinamide mononucleotide transporter C3B79_3468 PF01048 Phosphorylase superfamily C3B79_3473 PF16657 Maltogenic Amylase, C-terminal domain C3B79_3473 PF00128 Alpha amylase, catalytic domain C3B79_3477 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C3B79_3477 PF10371 Domain of unknown function C3B79_3477 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3B79_3477 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C3B79_3477 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C3B79_3478 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C3B79_3478 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C3B79_3478 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3B79_3478 PF10371 Domain of unknown function C3B79_3478 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C3B79_3479 PF07690 Major Facilitator Superfamily C3B79_3480 PF13419 Haloacid dehalogenase-like hydrolase C3B79_3482 PF00171 Aldehyde dehydrogenase family C3B79_3483 PF04958 Arginine N-succinyltransferase beta subunit C3B79_3484 PF00202 Aminotransferase class-III C3B79_3485 PF00117 Glutamine amidotransferase class-I C3B79_3487 PF00579 tRNA synthetases class I (W and Y) C3B79_3488 PF13419 Haloacid dehalogenase-like hydrolase C3B79_3489 PF00834 Ribulose-phosphate 3 epimerase family C3B79_3490 PF02086 D12 class N6 adenine-specific DNA methyltransferase C3B79_3492 PF01761 3-dehydroquinate synthase C3B79_3493 PF01202 Shikimate kinase C3B79_3494 PF11741 AMIN domain C3B79_3494 PF00263 Bacterial type II and III secretion system protein C3B79_3494 PF03958 Bacterial type II/III secretion system short domain C3B79_3494 PF07660 Secretin and TonB N terminus short domain C3B79_3499 PF00912 Transglycosylase C3B79_3499 PF17092 Penicillin-binding protein OB-like domain C3B79_3499 PF00905 Penicillin binding protein transpeptidase domain C3B79_3500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_3500 PF03466 LysR substrate binding domain C3B79_3501 PF02743 Cache domain C3B79_3501 PF00672 HAMP domain C3B79_3501 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_3504 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_3504 PF03466 LysR substrate binding domain C3B79_3507 PF01476 LysM domain C3B79_3507 PF01551 Peptidase family M23 C3B79_3507 PF08525 Opacity-associated protein A N-terminal motif C3B79_3509 PF00924 Mechanosensitive ion channel C3B79_3509 PF12794 Mechanosensitive ion channel inner membrane domain 1 C3B79_3509 PF12795 Mechanosensitive ion channel porin domain C3B79_3510 PF03009 Glycerophosphoryl diester phosphodiesterase family C3B79_3511 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_3511 PF00672 HAMP domain C3B79_3511 PF02743 Cache domain C3B79_3514 PF00890 FAD binding domain C3B79_3514 PF02910 Fumarate reductase flavoprotein C-term C3B79_3515 PF13183 4Fe-4S dicluster domain C3B79_3515 PF13085 2Fe-2S iron-sulfur cluster binding domain C3B79_3516 PF02300 Fumarate reductase subunit C C3B79_3517 PF02313 Fumarate reductase subunit D C3B79_3521 PF06224 Winged helix DNA-binding domain C3B79_3522 PF13649 Methyltransferase domain C3B79_3524 PF00501 AMP-binding enzyme C3B79_3529 PF00072 Response regulator receiver domain C3B79_3529 PF00486 Transcriptional regulatory protein, C terminal C3B79_3530 PF00512 His Kinase A (phospho-acceptor) domain C3B79_3530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_3530 PF08521 Two-component sensor kinase N-terminal C3B79_3534 PF00478 IMP dehydrogenase / GMP reductase domain C3B79_3536 PF09285 Elongation factor P, C-terminal C3B79_3536 PF01132 Elongation factor P (EF-P) OB domain C3B79_3536 PF08207 Elongation factor P (EF-P) KOW-like domain C3B79_3537 PF09997 Predicted membrane protein (DUF2238) C3B79_3539 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3B79_3539 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3B79_3541 PF08448 PAS fold C3B79_3541 PF00990 Diguanylate cyclase, GGDEF domain C3B79_3543 PF13419 Haloacid dehalogenase-like hydrolase C3B79_3546 PF05230 MASE2 domain C3B79_3546 PF00990 Diguanylate cyclase, GGDEF domain C3B79_3547 PF00313 'Cold-shock' DNA-binding domain C3B79_3548 PF00857 Isochorismatase family C3B79_3549 PF01494 FAD binding domain C3B79_3551 PF01938 TRAM domain C3B79_3551 PF00919 Uncharacterized protein family UPF0004 C3B79_3551 PF04055 Radical SAM superfamily C3B79_3552 PF02562 PhoH-like protein C3B79_3553 PF02130 Uncharacterized protein family UPF0054 C3B79_3554 PF00571 CBS domain C3B79_3554 PF03471 Transporter associated domain C3B79_3555 PF00795 Carbon-nitrogen hydrolase C3B79_3556 PF07295 Zinc-ribbon containing domain C3B79_3557 PF08264 Anticodon-binding domain of tRNA C3B79_3557 PF00133 tRNA synthetases class I (I, L, M and V) C3B79_3557 PF13603 Leucyl-tRNA synthetase, Domain 2 C3B79_3561 PF01467 Cytidylyltransferase-like C3B79_3563 PF02590 Predicted SPOUT methyltransferase C3B79_3564 PF03717 Penicillin-binding Protein dimerisation domain C3B79_3564 PF00905 Penicillin binding protein transpeptidase domain C3B79_3565 PF01098 Cell cycle protein C3B79_3566 PF01098 Cell cycle protein C3B79_3567 PF13406 Transglycosylase SLT domain C3B79_3568 PF05036 Sporulation related domain C3B79_3568 PF03330 Lytic transglycolase C3B79_3570 PF07943 Penicillin-binding protein 5, C-terminal domain C3B79_3570 PF00768 D-alanyl-D-alanine carboxypeptidase C3B79_3571 PF04359 Protein of unknown function (DUF493) C3B79_3572 PF03099 Biotin/lipoate A/B protein ligase family C3B79_3573 PF04055 Radical SAM superfamily C3B79_3573 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C3B79_3575 PF06821 Serine hydrolase C3B79_3576 PF02508 Rnf-Nqr subunit, membrane protein C3B79_3580 PF13411 MerR HTH family regulatory protein C3B79_3581 PF01368 DHH family C3B79_3581 PF17768 RecJ OB domain C3B79_3581 PF02272 DHHA1 domain C3B79_3582 PF10411 Disulfide bond isomerase protein N-terminus C3B79_3582 PF13098 Thioredoxin-like domain C3B79_3583 PF01741 Large-conductance mechanosensitive channel, MscL C3B79_3584 PF17158 Membrane-associated sensor, integral membrane domain C3B79_3584 PF00990 Diguanylate cyclase, GGDEF domain C3B79_3585 PF02899 Phage integrase, N-terminal SAM-like domain C3B79_3585 PF00589 Phage integrase family C3B79_3586 PF00258 Flavodoxin C3B79_3587 PF01523 Putative modulator of DNA gyrase C3B79_3588 PF01523 Putative modulator of DNA gyrase C3B79_3590 PF03734 L,D-transpeptidase catalytic domain C3B79_3590 PF17969 L,D-transpeptidase C-terminal domain C3B79_3592 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C3B79_3596 PF00384 Molybdopterin oxidoreductase C3B79_3596 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C3B79_3596 PF01568 Molydopterin dinucleotide binding domain C3B79_3597 PF01568 Molydopterin dinucleotide binding domain C3B79_3597 PF00384 Molybdopterin oxidoreductase C3B79_3597 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C3B79_3598 PF03916 Polysulphide reductase, NrfD C3B79_3599 PF13247 4Fe-4S dicluster domain C3B79_3601 PF00512 His Kinase A (phospho-acceptor) domain C3B79_3601 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_3601 PF00989 PAS fold C3B79_3602 PF02702 Osmosensitive K+ channel His kinase sensor domain C3B79_3602 PF00512 His Kinase A (phospho-acceptor) domain C3B79_3602 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_3602 PF13492 GAF domain C3B79_3602 PF13493 Domain of unknown function (DUF4118) C3B79_3603 PF00072 Response regulator receiver domain C3B79_3603 PF00196 Bacterial regulatory proteins, luxR family C3B79_3604 PF06580 Histidine kinase C3B79_3604 PF07694 5TMR of 5TMR-LYT C3B79_3605 PF04397 LytTr DNA-binding domain C3B79_3605 PF00072 Response regulator receiver domain C3B79_3606 PF02554 Carbon starvation protein CstA C3B79_3606 PF13722 5TM C-terminal transporter carbon starvation CstA C3B79_3607 PF13722 5TM C-terminal transporter carbon starvation CstA C3B79_3607 PF02554 Carbon starvation protein CstA C3B79_3608 PF03575 Peptidase family S51 C3B79_3609 PF10415 Fumarase C C-terminus C3B79_3609 PF00206 Lyase C3B79_3611 PF02635 DsrE/DsrF-like family C3B79_3612 PF03707 Bacterial signalling protein N terminal repeat C3B79_3612 PF00990 Diguanylate cyclase, GGDEF domain C3B79_3612 PF00563 EAL domain C3B79_3613 PF07690 Major Facilitator Superfamily C3B79_3614 PF00013 KH domain C3B79_3614 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C3B79_3614 PF01138 3' exoribonuclease family, domain 1 C3B79_3614 PF03725 3' exoribonuclease family, domain 2 C3B79_3614 PF00575 S1 RNA binding domain C3B79_3615 PF00312 Ribosomal protein S15 C3B79_3616 PF09157 Pseudouridine synthase II TruB, C-terminal C3B79_3616 PF16198 tRNA pseudouridylate synthase B C-terminal domain C3B79_3616 PF01509 TruB family pseudouridylate synthase (N terminal domain) C3B79_3617 PF02033 Ribosome-binding factor A C3B79_3618 PF04760 Translation initiation factor IF-2, N-terminal region C3B79_3618 PF00009 Elongation factor Tu GTP binding domain C3B79_3618 PF11987 Translation-initiation factor 2 C3B79_3618 PF08364 Bacterial translation initiation factor IF-2 associated region C3B79_3619 PF08529 NusA N-terminal domain C3B79_3619 PF13184 NusA-like KH domain C3B79_3619 PF00575 S1 RNA binding domain C3B79_3620 PF17384 RimP C-terminal SH3 domain C3B79_3620 PF02576 RimP N-terminal domain C3B79_3623 PF03840 Preprotein translocase SecG subunit C3B79_3624 PF00121 Triosephosphate isomerase C3B79_3625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C3B79_3625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C3B79_3625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C3B79_3625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C3B79_3626 PF00809 Pterin binding enzyme C3B79_3627 PF06480 FtsH Extracellular C3B79_3627 PF17862 AAA+ lid domain C3B79_3627 PF00004 ATPase family associated with various cellular activities (AAA) C3B79_3627 PF01434 Peptidase family M41 C3B79_3628 PF01728 FtsJ-like methyltransferase C3B79_3629 PF01985 CRS1 / YhbY (CRM) domain C3B79_3631 PF01272 Transcription elongation factor, GreA/GreB, C-term C3B79_3631 PF03449 Transcription elongation factor, N-terminal C3B79_3632 PF13677 Membrane MotB of proton-channel complex MotA/MotB C3B79_3632 PF00691 OmpA family C3B79_3633 PF01618 MotA/TolQ/ExbB proton channel family C3B79_3634 PF01618 MotA/TolQ/ExbB proton channel family C3B79_3635 PF02609 Exonuclease VII small subunit C3B79_3636 PF00348 Polyprenyl synthetase C3B79_3637 PF02779 Transketolase, pyrimidine binding domain C3B79_3637 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C3B79_3637 PF02780 Transketolase, C-terminal domain C3B79_3638 PF12911 N-terminal TM domain of oligopeptide transport permease C C3B79_3638 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_3640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3B79_3641 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3B79_3641 PF00005 ABC transporter C3B79_3642 PF04608 Phosphatidylglycerophosphatase A C3B79_3643 PF00586 AIR synthase related protein, N-terminal domain C3B79_3643 PF02769 AIR synthase related protein, C-terminal domain C3B79_3645 PF01029 NusB family C3B79_3646 PF00885 6,7-dimethyl-8-ribityllumazine synthase C3B79_3648 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C3B79_3648 PF00925 GTP cyclohydrolase II C3B79_3649 PF00677 Lumazine binding domain C3B79_3650 PF01872 RibD C-terminal domain C3B79_3650 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3B79_3651 PF03477 ATP cone domain C3B79_3653 PF00464 Serine hydroxymethyltransferase C3B79_3656 PF02613 Nitrate reductase delta subunit C3B79_3660 PF00990 Diguanylate cyclase, GGDEF domain C3B79_3660 PF13188 PAS domain C3B79_3660 PF00563 EAL domain C3B79_3660 PF03707 Bacterial signalling protein N terminal repeat C3B79_3662 PF16177 Acetyl-coenzyme A synthetase N-terminus C3B79_3662 PF13193 AMP-binding enzyme C-terminal domain C3B79_3662 PF00501 AMP-binding enzyme C3B79_3663 PF13193 AMP-binding enzyme C-terminal domain C3B79_3663 PF16177 Acetyl-coenzyme A synthetase N-terminus C3B79_3663 PF00501 AMP-binding enzyme C3B79_3664 PF01220 Dehydroquinase class II C3B79_3665 PF00364 Biotin-requiring enzyme C3B79_3666 PF00289 Biotin carboxylase, N-terminal domain C3B79_3666 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3B79_3666 PF02785 Biotin carboxylase C-terminal domain C3B79_3668 PF00474 Sodium:solute symporter family C3B79_3669 PF00474 Sodium:solute symporter family C3B79_3671 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3B79_3671 PF00367 phosphotransferase system, EIIB C3B79_3671 PF02378 Phosphotransferase system, EIIC C3B79_3672 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_3672 PF03466 LysR substrate binding domain C3B79_3673 PF00107 Zinc-binding dehydrogenase C3B79_3673 PF08240 Alcohol dehydrogenase GroES-like domain C3B79_3676 PF14602 Hexapeptide repeat of succinyl-transferase C3B79_3676 PF12464 Maltose acetyltransferase C3B79_3677 PF00881 Nitroreductase family C3B79_3678 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3B79_3678 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3B79_3680 PF01343 Peptidase family S49 C3B79_3683 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C3B79_3683 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C3B79_3684 PF07023 Protein of unknown function (DUF1315) C3B79_3685 PF00710 Asparaginase, N-terminal C3B79_3685 PF17763 Glutaminase/Asparaginase C-terminal domain C3B79_3686 PF17763 Glutaminase/Asparaginase C-terminal domain C3B79_3686 PF00710 Asparaginase, N-terminal C3B79_3687 PF03616 Sodium/glutamate symporter C3B79_3688 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_3688 PF02743 Cache domain C3B79_3688 PF00672 HAMP domain C3B79_3689 PF03462 PCRF domain C3B79_3689 PF00472 RF-1 domain C3B79_3690 PF00152 tRNA synthetases class II (D, K and N) C3B79_3690 PF01336 OB-fold nucleic acid binding domain C3B79_3691 PF02567 Phenazine biosynthesis-like protein C3B79_3692 PF00175 Oxidoreductase NAD-binding domain C3B79_3692 PF00258 Flavodoxin C3B79_3692 PF00667 FAD binding domain C3B79_3693 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C3B79_3693 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C3B79_3694 PF01507 Phosphoadenosine phosphosulfate reductase family C3B79_3695 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C3B79_3696 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_3697 PF00571 CBS domain C3B79_3697 PF00005 ABC transporter C3B79_3699 PF00186 Dihydrofolate reductase C3B79_3700 PF06738 Putative threonine/serine exporter C3B79_3702 PF00994 Probable molybdopterin binding domain C3B79_3704 PF02801 Beta-ketoacyl synthase, C-terminal domain C3B79_3704 PF00109 Beta-ketoacyl synthase, N-terminal domain C3B79_3707 PF00109 Beta-ketoacyl synthase, N-terminal domain C3B79_3707 PF02801 Beta-ketoacyl synthase, C-terminal domain C3B79_3712 PF00221 Aromatic amino acid lyase C3B79_3714 PF07977 FabA-like domain C3B79_3715 PF13193 AMP-binding enzyme C-terminal domain C3B79_3715 PF00501 AMP-binding enzyme C3B79_3717 PF00550 Phosphopantetheine attachment site C3B79_3718 PF00550 Phosphopantetheine attachment site C3B79_3727 PF00034 Cytochrome c C3B79_3727 PF03150 Di-haem cytochrome c peroxidase C3B79_3729 PF00194 Eukaryotic-type carbonic anhydrase C3B79_3730 PF04227 Indigoidine synthase A like protein C3B79_3731 PF00294 pfkB family carbohydrate kinase C3B79_3735 PF00582 Universal stress protein family C3B79_3738 PF00171 Aldehyde dehydrogenase family C3B79_3739 PF01472 PUA domain C3B79_3739 PF00696 Amino acid kinase family C3B79_3741 PF07417 Sigma factor-binding transcriptional regulator Crl C3B79_3743 PF00156 Phosphoribosyl transferase domain C3B79_3745 PF01546 Peptidase family M20/M25/M40 C3B79_3745 PF07687 Peptidase dimerisation domain C3B79_3748 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3B79_3748 PF00005 ABC transporter C3B79_3749 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3B79_3749 PF00005 ABC transporter C3B79_3751 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_3751 PF12911 N-terminal TM domain of oligopeptide transport permease C C3B79_3752 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_3753 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_3755 PF00593 TonB dependent receptor C3B79_3755 PF07715 TonB-dependent Receptor Plug Domain C3B79_3757 PF01618 MotA/TolQ/ExbB proton channel family C3B79_3758 PF01618 MotA/TolQ/ExbB proton channel family C3B79_3759 PF02472 Biopolymer transport protein ExbD/TolR C3B79_3763 PF00704 Glycosyl hydrolases family 18 C3B79_3763 PF06483 Chitinase C C3B79_3770 PF00749 tRNA synthetases class I (E and Q), catalytic domain C3B79_3772 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_3772 PF00672 HAMP domain C3B79_3774 PF00313 'Cold-shock' DNA-binding domain C3B79_3782 PF00929 Exonuclease C3B79_3783 PF03193 RsgA GTPase C3B79_3784 PF03193 RsgA GTPase C3B79_3785 PF02666 Phosphatidylserine decarboxylase C3B79_3786 PF09905 DNA-binding protein VF530 C3B79_3789 PF04224 Protein of unknown function, DUF417 C3B79_3790 PF02627 Carboxymuconolactone decarboxylase family C3B79_3792 PF12852 Cupin C3B79_3792 PF12833 Helix-turn-helix domain C3B79_3794 PF00990 Diguanylate cyclase, GGDEF domain C3B79_3794 PF03707 Bacterial signalling protein N terminal repeat C3B79_3794 PF00563 EAL domain C3B79_3795 PF06877 Regulator of ribonuclease activity B C3B79_3797 PF05547 Immune inhibitor A peptidase M6 C3B79_3797 PF00801 PKD domain C3B79_3801 PF00561 alpha/beta hydrolase fold C3B79_3802 PF00005 ABC transporter C3B79_3802 PF00664 ABC transporter transmembrane region C3B79_3803 PF00664 ABC transporter transmembrane region C3B79_3803 PF00005 ABC transporter C3B79_3804 PF06004 Bacterial protein of unknown function (DUF903) C3B79_3806 PF00581 Rhodanese-like domain C3B79_3807 PF04960 Glutaminase C3B79_3808 PF04960 Glutaminase C3B79_3809 PF04320 Protein with unknown function (DUF469) C3B79_3810 PF02390 Putative methyltransferase C3B79_3811 PF04389 Peptidase family M28 C3B79_3811 PF01483 Proprotein convertase P-domain C3B79_3812 PF00155 Aminotransferase class I and II C3B79_3813 PF00563 EAL domain C3B79_3813 PF00196 Bacterial regulatory proteins, luxR family C3B79_3815 PF08338 Domain of unknown function (DUF1731) C3B79_3815 PF01370 NAD dependent epimerase/dehydratase family C3B79_3817 PF00005 ABC transporter C3B79_3818 PF13472 GDSL-like Lipase/Acylhydrolase family C3B79_3819 PF00072 Response regulator receiver domain C3B79_3819 PF01584 CheW-like domain C3B79_3822 PF06826 Predicted Permease Membrane Region C3B79_3822 PF02080 TrkA-C domain C3B79_3823 PF03006 Haemolysin-III related C3B79_3825 PF00282 Pyridoxal-dependent decarboxylase conserved domain C3B79_3826 PF04279 Intracellular septation protein A C3B79_3827 PF03795 YCII-related domain C3B79_3828 PF00459 Inositol monophosphatase family C3B79_3830 PF00483 Nucleotidyl transferase C3B79_3832 PF00854 POT family C3B79_3833 PF00072 Response regulator receiver domain C3B79_3839 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C3B79_3840 PF02321 Outer membrane efflux protein C3B79_3841 PF01207 Dihydrouridine synthase (Dus) C3B79_3842 PF02954 Bacterial regulatory protein, Fis family C3B79_3843 PF01810 LysE type translocator C3B79_3849 PF01521 Iron-sulphur cluster biosynthesis C3B79_3851 PF00654 Voltage gated chloride channel C3B79_3852 PF00654 Voltage gated chloride channel C3B79_3853 PF00202 Aminotransferase class-III C3B79_3856 PF01569 PAP2 superfamily C3B79_3858 PF11849 Domain of unknown function (DUF3369) C3B79_3861 PF00893 Small Multidrug Resistance protein C3B79_3862 PF00893 Small Multidrug Resistance protein C3B79_3863 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3B79_3864 PF00905 Penicillin binding protein transpeptidase domain C3B79_3864 PF14814 Bifunctional transglycosylase second domain C3B79_3864 PF00912 Transglycosylase C3B79_3865 PF00271 Helicase conserved C-terminal domain C3B79_3865 PF04408 Helicase associated domain (HA2) C3B79_3865 PF00270 DEAD/DEAH box helicase C3B79_3865 PF08482 ATP-dependent helicase C-terminal C3B79_3868 PF17746 SfsA N-terminal OB domain C3B79_3868 PF03749 Sugar fermentation stimulation protein RE domain C3B79_3869 PF01258 Prokaryotic dksA/traR C4-type zinc finger C3B79_3870 PF00749 tRNA synthetases class I (E and Q), catalytic domain C3B79_3873 PF01743 Poly A polymerase head domain C3B79_3873 PF12627 Probable RNA and SrmB- binding site of polymerase A C3B79_3873 PF12626 Polymerase A arginine-rich C-terminus C3B79_3874 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C3B79_3875 PF02548 Ketopantoate hydroxymethyltransferase C3B79_3877 PF02569 Pantoate-beta-alanine ligase C3B79_3881 PF01869 BadF/BadG/BcrA/BcrD ATPase family C3B79_3882 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component C3B79_3883 PF01061 ABC-2 type transporter C3B79_3884 PF00005 ABC transporter C3B79_3885 PF00156 Phosphoribosyl transferase domain C3B79_3886 PF00440 Bacterial regulatory proteins, tetR family C3B79_3887 PF02441 Flavoprotein C3B79_3888 PF01225 Mur ligase family, catalytic domain C3B79_3888 PF02875 Mur ligase family, glutamate ligase domain C3B79_3888 PF08245 Mur ligase middle domain C3B79_3890 PF00719 Inorganic pyrophosphatase C3B79_3893 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) C3B79_3896 PF00005 ABC transporter C3B79_3900 PF08447 PAS fold C3B79_3900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_3906 PF03600 Citrate transporter C3B79_3906 PF02080 TrkA-C domain C3B79_3907 PF00009 Elongation factor Tu GTP binding domain C3B79_3908 PF01507 Phosphoadenosine phosphosulfate reductase family C3B79_3909 PF14824 Sirohaem biosynthesis protein central C3B79_3909 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3B79_3909 PF10414 Sirohaem synthase dimerisation region C3B79_3910 PF01145 SPFH domain / Band 7 family C3B79_3910 PF16200 C-terminal region of band_7 C3B79_3911 PF16200 C-terminal region of band_7 C3B79_3911 PF01145 SPFH domain / Band 7 family C3B79_3912 PF01957 NfeD-like C-terminal, partner-binding C3B79_3913 PF00571 CBS domain C3B79_3913 PF01380 SIS domain C3B79_3914 PF12848 ABC transporter C3B79_3914 PF00005 ABC transporter C3B79_3916 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C3B79_3918 PF03466 LysR substrate binding domain C3B79_3918 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_3919 PF02525 Flavodoxin-like fold C3B79_3922 PF10463 Peptidase U49 C3B79_3925 PF13411 MerR HTH family regulatory protein C3B79_3928 PF13007 Transposase C of IS166 homeodomain C3B79_3928 PF13817 IS66 C-terminal element C3B79_3928 PF13005 zinc-finger binding domain of transposase IS66 C3B79_3928 PF03050 Transposase IS66 family C3B79_3929 PF05717 IS66 Orf2 like protein C3B79_3931 PF00474 Sodium:solute symporter family C3B79_3932 PF17969 L,D-transpeptidase C-terminal domain C3B79_3932 PF03734 L,D-transpeptidase catalytic domain C3B79_3934 PF00924 Mechanosensitive ion channel C3B79_3935 PF00871 Acetokinase family C3B79_3937 PF04074 YhcH/YjgK/YiaL C3B79_3939 PF07732 Multicopper oxidase C3B79_3939 PF07731 Multicopper oxidase C3B79_3939 PF00394 Multicopper oxidase C3B79_3940 PF01177 Asp/Glu/Hydantoin racemase C3B79_3941 PF01810 LysE type translocator C3B79_3943 PF00392 Bacterial regulatory proteins, gntR family C3B79_3943 PF00155 Aminotransferase class I and II C3B79_3949 PF00209 Sodium:neurotransmitter symporter family C3B79_3952 PF00209 Sodium:neurotransmitter symporter family C3B79_3956 PF07690 Major Facilitator Superfamily C3B79_3959 PF01037 Lrp/AsnC ligand binding domain C3B79_3962 PF01047 MarR family C3B79_3963 PF02566 OsmC-like protein C3B79_3964 PF16884 N-terminal domain of oxidoreductase C3B79_3964 PF00107 Zinc-binding dehydrogenase C3B79_3966 PF00293 NUDIX domain C3B79_3968 PF01641 SelR domain C3B79_3969 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C3B79_3969 PF00128 Alpha amylase, catalytic domain C3B79_3970 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C3B79_3970 PF00128 Alpha amylase, catalytic domain C3B79_3970 PF02806 Alpha amylase, C-terminal all-beta domain C3B79_3971 PF02446 4-alpha-glucanotransferase C3B79_3973 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C3B79_3973 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C3B79_3974 PF01263 Aldose 1-epimerase C3B79_3975 PF02445 Quinolinate synthetase A protein C3B79_3977 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_3977 PF00672 HAMP domain C3B79_3992 PF16331 TolA binding protein trimerisation C3B79_3992 PF13174 Tetratricopeptide repeat C3B79_3993 PF00691 OmpA family C3B79_3994 PF04052 TolB amino-terminal domain C3B79_3994 PF07676 WD40-like Beta Propeller Repeat C3B79_3996 PF02472 Biopolymer transport protein ExbD/TolR C3B79_3997 PF01618 MotA/TolQ/ExbB proton channel family C3B79_3998 PF03061 Thioesterase superfamily C3B79_3999 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) C3B79_4000 PF08173 Membrane bound YbgT-like protein C3B79_4001 PF02322 Cytochrome bd terminal oxidase subunit II C3B79_4002 PF01654 Cytochrome bd terminal oxidase subunit I C3B79_4004 PF17864 RuvB AAA lid domain C3B79_4004 PF05491 RuvB C-terminal winged helix domain C3B79_4004 PF05496 Holliday junction DNA helicase RuvB P-loop domain C3B79_4005 PF07499 RuvA, C-terminal domain C3B79_4005 PF01330 RuvA N terminal domain C3B79_4006 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_4006 PF00672 HAMP domain C3B79_4007 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3B79_4007 PF04073 Aminoacyl-tRNA editing domain C3B79_4007 PF03129 Anticodon binding domain C3B79_4008 PF00106 short chain dehydrogenase C3B79_4011 PF00378 Enoyl-CoA hydratase/isomerase C3B79_4012 PF10952 Protein of unknown function (DUF2753) C3B79_4014 PF00132 Bacterial transferase hexapeptide (six repeats) C3B79_4016 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3B79_4019 PF02594 Uncharacterised ACR, YggU family COG1872 C3B79_4020 PF02325 YGGT family C3B79_4021 PF03807 NADP oxidoreductase coenzyme F420-dependent C3B79_4021 PF14748 Pyrroline-5-carboxylate reductase dimerisation C3B79_4022 PF14748 Pyrroline-5-carboxylate reductase dimerisation C3B79_4022 PF03807 NADP oxidoreductase coenzyme F420-dependent C3B79_4023 PF01168 Alanine racemase, N-terminal domain C3B79_4024 PF00437 Type II/IV secretion system protein C3B79_4025 PF00437 Type II/IV secretion system protein C3B79_4026 PF03883 Peroxide stress protein YaaA C3B79_4027 PF00271 Helicase conserved C-terminal domain C3B79_4027 PF00270 DEAD/DEAH box helicase C3B79_4028 PF05175 Methyltransferase small domain C3B79_4029 PF05525 Branched-chain amino acid transport protein C3B79_4030 PF05525 Branched-chain amino acid transport protein C3B79_4034 PF01207 Dihydrouridine synthase (Dus) C3B79_4037 PF00216 Bacterial DNA-binding protein C3B79_4039 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ C3B79_4040 PF07238 PilZ domain C3B79_4041 PF18073 Rubredoxin metal binding domain C3B79_4044 PF18429 Domain of unknown function (DUF5609) C3B79_4046 PF00563 EAL domain C3B79_4046 PF00990 Diguanylate cyclase, GGDEF domain C3B79_4046 PF05231 MASE1 C3B79_4046 PF08447 PAS fold C3B79_4046 PF08448 PAS fold C3B79_4046 PF13426 PAS domain C3B79_4047 PF01048 Phosphorylase superfamily C3B79_4048 PF01676 Metalloenzyme superfamily C3B79_4049 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain C3B79_4049 PF02885 Glycosyl transferase family, helical bundle domain C3B79_4049 PF00591 Glycosyl transferase family, a/b domain C3B79_4050 PF01791 DeoC/LacD family aldolase C3B79_4052 PF07662 Na+ dependent nucleoside transporter C-terminus C3B79_4052 PF01773 Na+ dependent nucleoside transporter N-terminus C3B79_4052 PF07670 Nucleoside recognition C3B79_4053 PF01026 TatD related DNase C3B79_4055 PF07963 Prokaryotic N-terminal methylation motif C3B79_4055 PF00114 Pilin (bacterial filament) C3B79_4057 PF01938 TRAM domain C3B79_4057 PF05958 tRNA (Uracil-5-)-methyltransferase C3B79_4058 PF00909 Ammonium Transporter Family C3B79_4061 PF03739 Lipopolysaccharide export system permease LptF/LptG C3B79_4062 PF03739 Lipopolysaccharide export system permease LptF/LptG C3B79_4063 PF02789 Cytosol aminopeptidase family, N-terminal domain C3B79_4063 PF00883 Cytosol aminopeptidase family, catalytic domain C3B79_4064 PF04364 DNA polymerase III chi subunit, HolC C3B79_4065 PF08264 Anticodon-binding domain of tRNA C3B79_4065 PF10458 Valyl tRNA synthetase tRNA binding arm C3B79_4065 PF00133 tRNA synthetases class I (I, L, M and V) C3B79_4066 PF01595 Cyclin M transmembrane N-terminal domain C3B79_4066 PF03471 Transporter associated domain C3B79_4066 PF00571 CBS domain C3B79_4067 PF09335 SNARE associated Golgi protein C3B79_4068 PF00768 D-alanyl-D-alanine carboxypeptidase C3B79_4075 PF02599 Global regulator protein family C3B79_4076 PF13840 ACT domain C3B79_4076 PF01842 ACT domain C3B79_4076 PF00696 Amino acid kinase family C3B79_4077 PF01411 tRNA synthetases class II (A) C3B79_4077 PF02272 DHHA1 domain C3B79_4077 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C3B79_4079 PF02631 RecX family C3B79_4080 PF00154 recA bacterial DNA recombination protein C3B79_4081 PF02464 Competence-damaged protein C3B79_4082 PF00488 MutS domain V C3B79_4082 PF05190 MutS family domain IV C3B79_4082 PF05188 MutS domain II C3B79_4082 PF01624 MutS domain I C3B79_4082 PF05192 MutS domain III C3B79_4083 PF02028 BCCT, betaine/carnitine/choline family transporter C3B79_4086 PF04222 Protein of unknown function (DUF416) C3B79_4087 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3B79_4087 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3B79_4088 PF01476 LysM domain C3B79_4088 PF08525 Opacity-associated protein A N-terminal motif C3B79_4088 PF01551 Peptidase family M23 C3B79_4093 PF01297 Zinc-uptake complex component A periplasmic C3B79_4094 PF00005 ABC transporter C3B79_4095 PF00950 ABC 3 transport family C3B79_4096 PF03466 LysR substrate binding domain C3B79_4096 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_4097 PF00892 EamA-like transporter family C3B79_4098 PF03167 Uracil DNA glycosylase superfamily C3B79_4099 PF00892 EamA-like transporter family C3B79_4101 PF01541 GIY-YIG catalytic domain C3B79_4104 PF04012 PspA/IM30 family C3B79_4105 PF01553 Acyltransferase C3B79_4110 PF00578 AhpC/TSA family C3B79_4111 PF01556 DnaJ C terminal domain C3B79_4111 PF00226 DnaJ domain C3B79_4111 PF00684 DnaJ central domain C3B79_4117 PF13676 TIR domain C3B79_4118 PF03989 DNA gyrase C-terminal domain, beta-propeller C3B79_4118 PF00521 DNA gyrase/topoisomerase IV, subunit A C3B79_4119 PF01751 Toprim domain C3B79_4119 PF00204 DNA gyrase B C3B79_4119 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B79_4119 PF00986 DNA gyrase B subunit, carboxyl terminus C3B79_4121 PF04632 Fusaric acid resistance protein family C3B79_4122 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C3B79_4122 PF00529 HlyD membrane-fusion protein of T1SS C3B79_4123 PF07869 Protein of unknown function (DUF1656) C3B79_4125 PF00293 NUDIX domain C3B79_4126 PF05728 Uncharacterised protein family (UPF0227) C3B79_4127 PF00149 Calcineurin-like phosphoesterase C3B79_4128 PF06853 Protein of unknown function (DUF1249) C3B79_4130 PF00293 NUDIX domain C3B79_4131 PF02321 Outer membrane efflux protein C3B79_4132 PF00294 pfkB family carbohydrate kinase C3B79_4132 PF01467 Cytidylyltransferase-like C3B79_4134 PF03279 Bacterial lipid A biosynthesis acyltransferase C3B79_4138 PF01865 Protein of unknown function DUF47 C3B79_4139 PF01384 Phosphate transporter family C3B79_4140 PF04073 Aminoacyl-tRNA editing domain C3B79_4141 PF07350 Protein of unknown function (DUF1479) C3B79_4146 PF00392 Bacterial regulatory proteins, gntR family C3B79_4146 PF00155 Aminotransferase class I and II C3B79_4147 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_4147 PF03466 LysR substrate binding domain C3B79_4148 PF03788 LrgA family C3B79_4149 PF04172 LrgB-like family C3B79_4152 PF01966 HD domain C3B79_4152 PF12627 Probable RNA and SrmB- binding site of polymerase A C3B79_4152 PF01743 Poly A polymerase head domain C3B79_4153 PF01471 Putative peptidoglycan binding domain C3B79_4153 PF13401 AAA domain C3B79_4154 PF16537 Type II secretion system protein B C3B79_4155 PF10576 Iron-sulfur binding domain of endonuclease III C3B79_4155 PF00633 Helix-hairpin-helix motif C3B79_4155 PF00730 HhH-GPD superfamily base excision DNA repair protein C3B79_4155 PF14815 NUDIX domain C3B79_4156 PF04362 Bacterial Fe(2+) trafficking C3B79_4157 PF01464 Transglycosylase SLT domain C3B79_4157 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain C3B79_4158 PF04076 Bacterial OB fold (BOF) protein C3B79_4159 PF00657 GDSL-like Lipase/Acylhydrolase C3B79_4161 PF01389 OmpA-like transmembrane domain C3B79_4161 PF00691 OmpA family C3B79_4162 PF03886 ABC-type transport auxiliary lipoprotein component C3B79_4163 PF02470 MlaD protein C3B79_4164 PF04403 Paraquat-inducible protein A C3B79_4165 PF17209 Hfq protein C3B79_4166 PF13419 Haloacid dehalogenase-like hydrolase C3B79_4168 PF00360 Phytochrome region C3B79_4168 PF00990 Diguanylate cyclase, GGDEF domain C3B79_4168 PF01590 GAF domain C3B79_4168 PF00563 EAL domain C3B79_4169 PF00701 Dihydrodipicolinate synthetase family C3B79_4171 PF08468 Methyltransferase small domain N-terminal C3B79_4171 PF05175 Methyltransferase small domain C3B79_4172 PF00483 Nucleotidyl transferase C3B79_4174 PF00534 Glycosyl transferases group 1 C3B79_4174 PF08323 Starch synthase catalytic domain C3B79_4182 PF03553 Na+/H+ antiporter family C3B79_4183 PF03466 LysR substrate binding domain C3B79_4183 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_4184 PF13416 Bacterial extracellular solute-binding protein C3B79_4185 PF08402 TOBE domain C3B79_4185 PF00005 ABC transporter C3B79_4186 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_4187 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_4188 PF00528 Binding-protein-dependent transport system inner membrane component C3B79_4189 PF00171 Aldehyde dehydrogenase family C3B79_4191 PF00892 EamA-like transporter family C3B79_4192 PF01037 Lrp/AsnC ligand binding domain C3B79_4193 PF14602 Hexapeptide repeat of succinyl-transferase C3B79_4193 PF12464 Maltose acetyltransferase C3B79_4194 PF00128 Alpha amylase, catalytic domain C3B79_4194 PF11941 Domain of unknown function (DUF3459) C3B79_4195 PF02378 Phosphotransferase system, EIIC C3B79_4195 PF00367 phosphotransferase system, EIIB C3B79_4196 PF00356 Bacterial regulatory proteins, lacI family C3B79_4199 PF00710 Asparaginase, N-terminal C3B79_4199 PF17763 Glutaminase/Asparaginase C-terminal domain C3B79_4202 PF02142 MGS-like domain C3B79_4203 PF02142 MGS-like domain C3B79_4206 PF00210 Ferritin-like domain C3B79_4209 PF17176 tRNA-binding domain C3B79_4209 PF05127 Helicase C3B79_4209 PF08351 Domain of unknown function (DUF1726) C3B79_4209 PF13718 GNAT acetyltransferase 2 C3B79_4211 PF01584 CheW-like domain C3B79_4211 PF00072 Response regulator receiver domain C3B79_4221 PF02660 Glycerol-3-phosphate acyltransferase C3B79_4222 PF02660 Glycerol-3-phosphate acyltransferase C3B79_4223 PF02152 Dihydroneopterin aldolase C3B79_4224 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C3B79_4226 PF07690 Major Facilitator Superfamily C3B79_4227 PF07690 Major Facilitator Superfamily C3B79_4228 PF07683 Cobalamin synthesis protein cobW C-terminal domain C3B79_4228 PF02492 CobW/HypB/UreG, nucleotide-binding domain C3B79_4229 PF04030 D-arabinono-1,4-lactone oxidase C3B79_4229 PF01565 FAD binding domain C3B79_4230 PF01810 LysE type translocator C3B79_4231 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_4231 PF03466 LysR substrate binding domain C3B79_4232 PF00563 EAL domain C3B79_4232 PF05231 MASE1 C3B79_4233 PF12792 CSS motif domain associated with EAL C3B79_4233 PF00563 EAL domain C3B79_4234 PF11791 Aconitate B N-terminal domain C3B79_4234 PF00330 Aconitase family (aconitate hydratase) C3B79_4234 PF06434 Aconitate hydratase 2 N-terminus C3B79_4235 PF01734 Patatin-like phospholipase C3B79_4236 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_4236 PF12729 Four helix bundle sensory module for signal transduction C3B79_4236 PF00672 HAMP domain C3B79_4237 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B79_4237 PF12729 Four helix bundle sensory module for signal transduction C3B79_4237 PF00672 HAMP domain C3B79_4239 PF05230 MASE2 domain C3B79_4239 PF00990 Diguanylate cyclase, GGDEF domain C3B79_4240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3B79_4240 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3B79_4241 PF02817 e3 binding domain C3B79_4241 PF00364 Biotin-requiring enzyme C3B79_4241 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C3B79_4242 PF00456 Transketolase, thiamine diphosphate binding domain C3B79_4242 PF17831 Pyruvate dehydrogenase E1 component middle domain C3B79_4243 PF00392 Bacterial regulatory proteins, gntR family C3B79_4243 PF07729 FCD domain C3B79_4245 PF01510 N-acetylmuramoyl-L-alanine amidase C3B79_4247 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C3B79_4247 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C3B79_4249 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C3B79_4249 PF00437 Type II/IV secretion system protein C3B79_4250 PF00482 Type II secretion system (T2SS), protein F C3B79_4251 PF06750 Bacterial Peptidase A24 N-terminal domain C3B79_4251 PF01478 Type IV leader peptidase family C3B79_4252 PF06750 Bacterial Peptidase A24 N-terminal domain C3B79_4252 PF01478 Type IV leader peptidase family C3B79_4253 PF01121 Dephospho-CoA kinase C3B79_4254 PF07072 Cell division protein C3B79_4255 PF03884 DNA gyrase inhibitor YacG C3B79_4256 PF00293 NUDIX domain C3B79_4258 PF02810 SEC-C motif C3B79_4258 PF07516 SecA Wing and Scaffold domain C3B79_4258 PF07517 SecA DEAD-like domain C3B79_4258 PF01043 SecA preprotein cross-linking domain C3B79_4260 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C3B79_4261 PF00091 Tubulin/FtsZ family, GTPase domain C3B79_4261 PF12327 FtsZ family, C-terminal domain C3B79_4262 PF02491 SHS2 domain inserted in FTSA C3B79_4263 PF03799 Cell division protein FtsQ C3B79_4263 PF08478 POTRA domain, FtsQ-type C3B79_4264 PF08245 Mur ligase middle domain C3B79_4264 PF01225 Mur ligase family, catalytic domain C3B79_4264 PF02875 Mur ligase family, glutamate ligase domain C3B79_4265 PF03033 Glycosyltransferase family 28 N-terminal domain C3B79_4265 PF04101 Glycosyltransferase family 28 C-terminal domain C3B79_4266 PF03033 Glycosyltransferase family 28 N-terminal domain C3B79_4266 PF04101 Glycosyltransferase family 28 C-terminal domain C3B79_4267 PF01098 Cell cycle protein C3B79_4268 PF02875 Mur ligase family, glutamate ligase domain C3B79_4268 PF08245 Mur ligase middle domain C3B79_4269 PF00953 Glycosyl transferase family 4 C3B79_4269 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C3B79_4270 PF01225 Mur ligase family, catalytic domain C3B79_4270 PF02875 Mur ligase family, glutamate ligase domain C3B79_4270 PF08245 Mur ligase middle domain C3B79_4271 PF08245 Mur ligase middle domain C3B79_4271 PF02875 Mur ligase family, glutamate ligase domain C3B79_4271 PF01225 Mur ligase family, catalytic domain C3B79_4272 PF03717 Penicillin-binding Protein dimerisation domain C3B79_4272 PF00905 Penicillin binding protein transpeptidase domain C3B79_4273 PF04999 Cell division protein FtsL C3B79_4274 PF01795 MraW methylase family C3B79_4275 PF02381 MraZ protein, putative antitoxin-like C3B79_4276 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3B79_4277 PF04348 LppC putative lipoprotein C3B79_pla003 PF00111 2Fe-2S iron-sulfur cluster binding domain C3B79_pla013 PF00436 Single-strand binding protein family C3B79_pla016 PF08406 CbbQ/NirQ/NorQ C-terminal C3B79_pla016 PF07728 AAA domain (dynein-related subfamily) C3B79_pla023 PF06834 TraU protein C3B79_pla024 PF08448 PAS fold C3B79_pla024 PF00990 Diguanylate cyclase, GGDEF domain C3B79_pla024 PF08447 PAS fold C3B79_pla024 PF00563 EAL domain C3B79_pla029 PF10411 Disulfide bond isomerase protein N-terminus C3B79_pla029 PF13098 Thioredoxin-like domain C3B79_pla032 PF00893 Small Multidrug Resistance protein C3B79_pla033 PF08212 Lipocalin-like domain C3B79_pla034 PF00144 Beta-lactamase C3B79_pla053 PF01131 DNA topoisomerase C3B79_pla053 PF01751 Toprim domain C3B79_pla059 PF00145 C-5 cytosine-specific DNA methylase C3B79_pla069 PF02195 ParB-like nuclease domain C3B79_pla069 PF06613 KorB C-terminal beta-barrel domain C3B79_pla069 PF08535 KorB domain C3B79_pla070 PF13614 AAA domain C3B79_pla072 PF00809 Pterin binding enzyme C3B79_pla073 PF01636 Phosphotransferase enzyme family C3B79_pla074 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase C3B79_pla076 PF02909 Tetracyclin repressor-like, C-terminal domain C3B79_pla076 PF00440 Bacterial regulatory proteins, tetR family C3B79_pla077 PF07690 Major Facilitator Superfamily C3B79_pla078 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B79_pla078 PF03466 LysR substrate binding domain C3B79_pla079 PF07690 Major Facilitator Superfamily C3B79_pla083 PF02796 Helix-turn-helix domain of resolvase C3B79_pla083 PF00239 Resolvase, N terminal domain C3B79_pla085 PF13610 DDE domain C3B79_pla087 PF13610 DDE domain C3B79_pla099 PF00216 Bacterial DNA-binding protein C3B79_pla100 PF00565 Staphylococcal nuclease homologue C3B79_pla109 PF01343 Peptidase family S49 C3B79_pla133 PF06122 Conjugative relaxosome accessory transposon protein C3B79_pla142 PF02899 Phage integrase, N-terminal SAM-like domain C3B79_pla142 PF00589 Phage integrase family C3B79_pla153 PF01548 Transposase C3B79_pla153 PF02371 Transposase IS116/IS110/IS902 family C3B79_pla154 PF00376 MerR family regulatory protein C3B79_pla154 PF09278 MerR, DNA binding C3B79_pla155 PF02411 MerT mercuric transport protein C3B79_pla156 PF00403 Heavy-metal-associated domain C3B79_pla157 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3B79_pla157 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3B79_pla157 PF00403 Heavy-metal-associated domain C3B79_pla158 PF12324 Helix-turn-helix domain of alkylmercury lyase C3B79_pla158 PF03243 Alkylmercury lyase C3B79_pla159 PF13411 MerR HTH family regulatory protein C3B79_pla160 PF05052 MerE protein C3B79_pla161 PF00990 Diguanylate cyclase, GGDEF domain C3B79_pla161 PF03707 Bacterial signalling protein N terminal repeat C3B79_pla161 PF00563 EAL domain C3B79_pla163 PF13610 DDE domain C3B79_pla164 PF13817 IS66 C-terminal element C3B79_pla164 PF13007 Transposase C of IS166 homeodomain C3B79_pla164 PF13005 zinc-finger binding domain of transposase IS66 C3B79_pla164 PF03050 Transposase IS66 family C3B79_pla165 PF05717 IS66 Orf2 like protein C3B79_pla168 PF01636 Phosphotransferase enzyme family C3B79_pla169 PF13610 DDE domain C3B79_pla170 PF01636 Phosphotransferase enzyme family C3B79_pla173 PF13610 DDE domain C3B79_pla175 PF00186 Dihydrofolate reductase C3B79_pla176 PF01909 Nucleotidyltransferase domain C3B79_pla176 PF13427 Domain of unknown function (DUF4111) C3B79_pla177 PF00905 Penicillin binding protein transpeptidase domain C3B79_pla178 PF07690 Major Facilitator Superfamily C3B79_pla180 PF00893 Small Multidrug Resistance protein C3B79_pla181 PF00589 Phage integrase family C3B79_pla181 PF13495 Phage integrase, N-terminal SAM-like domain C3B79_pla182 PF00239 Resolvase, N terminal domain C3B79_pla182 PF02796 Helix-turn-helix domain of resolvase C3B79_pla183 PF13700 Domain of unknown function (DUF4158) C3B79_pla183 PF01526 Tn3 transposase DDE domain C3B79_pla184 PF01548 Transposase C3B79_pla184 PF02371 Transposase IS116/IS110/IS902 family