locus-tag class description E4625_00005 PF11638 DnaA N-terminal domain E4625_00005 PF08299 Bacterial dnaA protein helix-turn-helix E4625_00005 PF00308 Bacterial dnaA protein E4625_00010 PF02767 DNA polymerase III beta subunit, central domain E4625_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain E4625_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain E4625_00015 PF02463 RecF/RecN/SMC N terminal domain E4625_00020 PF01751 Toprim domain E4625_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_00020 PF18053 DNA gyrase B subunit insert domain E4625_00020 PF00986 DNA gyrase B subunit, carboxyl terminus E4625_00020 PF00204 DNA gyrase B E4625_00030 PF13280 WYL domain E4625_00030 PF08279 HTH domain E4625_00035 PF00011 Hsp20/alpha crystallin family E4625_00040 PF00011 Hsp20/alpha crystallin family E4625_00045 PF00155 Aminotransferase class I and II E4625_00060 PF07690 Major Facilitator Superfamily E4625_00065 PF00486 Transcriptional regulatory protein, C terminal E4625_00065 PF00072 Response regulator receiver domain E4625_00070 PF02702 Osmosensitive K+ channel His kinase sensor domain E4625_00070 PF13493 Domain of unknown function (DUF4118) E4625_00070 PF13492 GAF domain E4625_00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_00070 PF00512 His Kinase A (phospho-acceptor) domain E4625_00075 PF02669 K+-transporting ATPase, c chain E4625_00085 PF03814 Potassium-transporting ATPase A subunit E4625_00095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4625_00095 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4625_00100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_00100 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4625_00100 PF00512 His Kinase A (phospho-acceptor) domain E4625_00105 PF00873 AcrB/AcrD/AcrF family E4625_00110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4625_00115 PF00440 Bacterial regulatory proteins, tetR family E4625_00145 PF00224 Pyruvate kinase, barrel domain E4625_00145 PF02887 Pyruvate kinase, alpha/beta domain E4625_00150 PF07690 Major Facilitator Superfamily E4625_00160 PF00512 His Kinase A (phospho-acceptor) domain E4625_00160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_00160 PF00672 HAMP domain E4625_00165 PF02954 Bacterial regulatory protein, Fis family E4625_00165 PF00072 Response regulator receiver domain E4625_00165 PF14532 Sigma-54 interaction domain E4625_00180 PF12146 Serine aminopeptidase, S33 E4625_00190 PF12105 SpoU, rRNA methylase, C-terminal E4625_00190 PF00588 SpoU rRNA Methylase family E4625_00195 PF02824 TGS domain E4625_00195 PF04607 Region found in RelA / SpoT proteins E4625_00195 PF13291 ACT domain E4625_00200 PF01192 RNA polymerase Rpb6 E4625_00205 PF00625 Guanylate kinase E4625_00210 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E4625_00225 PF00892 EamA-like transporter family E4625_00245 PF03466 LysR substrate binding domain E4625_00245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_00250 PF00579 tRNA synthetases class I (W and Y) E4625_00255 PF00582 Universal stress protein family E4625_00260 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase E4625_00260 PF12241 Trans-2-enoyl-CoA reductase catalytic region E4625_00260 PF07055 Enoyl reductase FAD binding domain E4625_00265 PF00990 Diguanylate cyclase, GGDEF domain E4625_00265 PF08448 PAS fold E4625_00270 PF00210 Ferritin-like domain E4625_00280 PF07690 Major Facilitator Superfamily E4625_00285 PF01810 LysE type translocator E4625_00300 PF15976 CS1-pili formation C-terminal E4625_00300 PF16967 E-set like domain E4625_00305 PF18649 EcpB C-terminal domain E4625_00310 PF16449 Fimbrillin MatB E4625_00315 PF00072 Response regulator receiver domain E4625_00315 PF00196 Bacterial regulatory proteins, luxR family E4625_00320 PF00989 PAS fold E4625_00320 PF01627 Hpt domain E4625_00320 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4625_00320 PF00512 His Kinase A (phospho-acceptor) domain E4625_00320 PF00072 Response regulator receiver domain E4625_00320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_00330 PF07694 5TMR of 5TMR-LYT E4625_00330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_00330 PF06580 Histidine kinase E4625_00335 PF04397 LytTr DNA-binding domain E4625_00335 PF00072 Response regulator receiver domain E4625_00340 PF07690 Major Facilitator Superfamily E4625_00345 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain E4625_00345 PF02222 ATP-grasp domain E4625_00350 PF00731 AIR carboxylase E4625_00365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_00365 PF03466 LysR substrate binding domain E4625_00370 PF00593 TonB dependent receptor E4625_00370 PF07715 TonB-dependent Receptor Plug Domain E4625_00375 PF01177 Asp/Glu/Hydantoin racemase E4625_00410 PF00899 ThiF family E4625_00415 PF02657 Fe-S metabolism associated domain E4625_00420 PF00266 Aminotransferase class-V E4625_00425 PF00580 UvrD/REP helicase N-terminal domain E4625_00425 PF13361 UvrD-like helicase C-terminal domain E4625_00430 PF00563 EAL domain E4625_00430 PF03707 Bacterial signalling protein N terminal repeat E4625_00430 PF00990 Diguanylate cyclase, GGDEF domain E4625_00435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E4625_00440 PF00107 Zinc-binding dehydrogenase E4625_00440 PF08240 Alcohol dehydrogenase GroES-like domain E4625_00445 PF00155 Aminotransferase class I and II E4625_00450 PF08360 QacR-like protein, C-terminal region E4625_00450 PF00440 Bacterial regulatory proteins, tetR family E4625_00455 PF01370 NAD dependent epimerase/dehydratase family E4625_00470 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) E4625_00490 PF08340 Domain of unknown function (DUF1732) E4625_00490 PF03755 YicC-like family, N-terminal region E4625_00495 PF01138 3' exoribonuclease family, domain 1 E4625_00495 PF03725 3' exoribonuclease family, domain 2 E4625_00500 PF00156 Phosphoribosyl transferase domain E4625_00505 PF00403 Heavy-metal-associated domain E4625_00510 PF09278 MerR, DNA binding E4625_00510 PF00376 MerR family regulatory protein E4625_00515 PF01590 GAF domain E4625_00515 PF00990 Diguanylate cyclase, GGDEF domain E4625_00515 PF00563 EAL domain E4625_00515 PF00360 Phytochrome region E4625_00520 PF06288 Protein of unknown function (DUF1040) E4625_00525 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase E4625_00525 PF12801 4Fe-4S binding domain E4625_00525 PF13746 4Fe-4S dicluster domain E4625_00530 PF01636 Phosphotransferase enzyme family E4625_00535 PF01323 DSBA-like thioredoxin domain E4625_00540 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain E4625_00540 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family E4625_00545 PF00857 Isochorismatase family E4625_00555 PF04463 Protein of unknown function (DUF523) E4625_00560 PF01553 Acyltransferase E4625_00565 PF01553 Acyltransferase E4625_00570 PF13335 Magnesium chelatase, subunit ChlI C-terminal E4625_00570 PF01078 Magnesium chelatase, subunit ChlI E4625_00580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4625_00580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E4625_00580 PF00205 Thiamine pyrophosphate enzyme, central domain E4625_00590 PF01063 Amino-transferase class IV E4625_00595 PF00920 Dehydratase family E4625_00600 PF00291 Pyridoxal-phosphate dependent enzyme E4625_00600 PF00585 C-terminal regulatory domain of Threonine dehydratase E4625_00605 PF01389 OmpA-like transmembrane domain E4625_00605 PF00691 OmpA family E4625_00615 PF18074 Primosomal protein N C-terminal domain E4625_00615 PF18319 PriA DNA helicase Cys-rich region (CRR) domain E4625_00615 PF17764 3′ DNA-binding domain (3′BD) E4625_00615 PF00271 Helicase conserved C-terminal domain E4625_00615 PF00270 DEAD/DEAH box helicase E4625_00620 PF01197 Ribosomal protein L31 E4625_00625 PF11066 Protein of unknown function (DUF2867) E4625_00625 PF13460 NAD(P)H-binding E4625_00630 PF03949 Malic enzyme, NAD binding domain E4625_00630 PF00390 Malic enzyme, N-terminal domain E4625_00640 PF00672 HAMP domain E4625_00640 PF00512 His Kinase A (phospho-acceptor) domain E4625_00640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_00645 PF00072 Response regulator receiver domain E4625_00645 PF00486 Transcriptional regulatory protein, C terminal E4625_00650 PF05958 tRNA (Uracil-5-)-methyltransferase E4625_00685 PF16254 Domain of unknown function (DUF4910) E4625_00685 PF16221 winged helix-turn-helix E4625_00685 PF09940 Domain of unknown function (DUF2172) E4625_00705 PF08666 SAF domain E4625_00705 PF03102 NeuB family E4625_00715 PF02348 Cytidylyltransferase E4625_00735 PF00501 AMP-binding enzyme E4625_00735 PF13193 AMP-binding enzyme C-terminal domain E4625_00750 PF00535 Glycosyl transferase family 2 E4625_00755 PF03275 UDP-galactopyranose mutase E4625_00760 PF16363 GDP-mannose 4,6 dehydratase E4625_00765 PF02310 B12 binding domain E4625_00765 PF04055 Radical SAM superfamily E4625_00805 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4625_00810 PF02719 Polysaccharide biosynthesis protein E4625_00815 PF00128 Alpha amylase, catalytic domain E4625_00815 PF02903 Alpha amylase, N-terminal ig-like domain E4625_00830 PF00012 Hsp70 protein E4625_00835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4625_00835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4625_00840 PF05981 CreA protein E4625_00855 PF01258 Prokaryotic dksA/traR C4-type zinc finger E4625_00860 PF00120 Glutamine synthetase, catalytic domain E4625_00865 PF00202 Aminotransferase class-III E4625_00870 PF13416 Bacterial extracellular solute-binding protein E4625_00875 PF13416 Bacterial extracellular solute-binding protein E4625_00880 PF08402 TOBE domain E4625_00880 PF00005 ABC transporter E4625_00885 PF00528 Binding-protein-dependent transport system inner membrane component E4625_00890 PF00528 Binding-protein-dependent transport system inner membrane component E4625_00895 PF03473 MOSC domain E4625_00895 PF03475 3-alpha domain E4625_00915 PF03061 Thioesterase superfamily E4625_00920 PF00270 DEAD/DEAH box helicase E4625_00920 PF00271 Helicase conserved C-terminal domain E4625_00920 PF00570 HRDC domain E4625_00920 PF16124 RecQ zinc-binding E4625_00920 PF09382 RQC domain E4625_00925 PF00034 Cytochrome c E4625_00930 PF02696 Uncharacterized ACR, YdiU/UPF0061 family E4625_00940 PF02592 Putative vitamin uptake transporter E4625_00945 PF03737 Aldolase/RraA E4625_00950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_00950 PF00672 HAMP domain E4625_00955 PF00571 CBS domain E4625_00955 PF01769 Divalent cation transporter E4625_00955 PF03448 MgtE intracellular N domain E4625_00960 PF14824 Sirohaem biosynthesis protein central E4625_00960 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4625_00960 PF10414 Sirohaem synthase dimerisation region E4625_00965 PF01226 Formate/nitrite transporter E4625_00970 PF13806 Rieske-like [2Fe-2S] domain E4625_00975 PF18267 Rubredoxin NAD+ reductase C-terminal domain E4625_00975 PF04324 BFD-like [2Fe-2S] binding domain E4625_00975 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E4625_00975 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E4625_00975 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4625_00980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_00980 PF03466 LysR substrate binding domain E4625_00985 PF07690 Major Facilitator Superfamily E4625_00990 PF07724 AAA domain (Cdc48 subfamily) E4625_00990 PF00004 ATPase family associated with various cellular activities (AAA) E4625_00990 PF10431 C-terminal, D2-small domain, of ClpB protein E4625_00995 PF00227 Proteasome subunit E4625_01005 PF05746 DALR anticodon binding domain E4625_01005 PF00750 tRNA synthetases class I (R) E4625_01005 PF03485 Arginyl tRNA synthetase N terminal domain E4625_01015 PF04545 Sigma-70, region 4 E4625_01015 PF04542 Sigma-70 region 2 E4625_01020 PF12973 ChrR Cupin-like domain E4625_01025 PF02673 Bacitracin resistance protein BacA E4625_01030 PF00248 Aldo/keto reductase family E4625_01035 PF01263 Aldose 1-epimerase E4625_01040 PF00288 GHMP kinases N terminal domain E4625_01040 PF10509 Galactokinase galactose-binding signature E4625_01040 PF08544 GHMP kinases C terminal E4625_01045 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain E4625_01045 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain E4625_01050 PF16363 GDP-mannose 4,6 dehydratase E4625_01055 PF00356 Bacterial regulatory proteins, lacI family E4625_01060 PF00703 Glycosyl hydrolases family 2 E4625_01060 PF16353 Domain of unknown function(DUF4981) E4625_01060 PF02929 Beta galactosidase small chain E4625_01060 PF02837 Glycosyl hydrolases family 2, sugar binding domain E4625_01060 PF02836 Glycosyl hydrolases family 2, TIM barrel domain E4625_01065 PF13407 Periplasmic binding protein domain E4625_01070 PF00005 ABC transporter E4625_01075 PF02653 Branched-chain amino acid transport system / permease component E4625_01080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_01080 PF02743 Cache domain E4625_01080 PF00672 HAMP domain E4625_01105 PF00696 Amino acid kinase family E4625_01110 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4625_01110 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4625_01115 PF03606 C4-dicarboxylate anaerobic carrier E4625_01120 PF01316 Arginine repressor, DNA binding domain E4625_01120 PF02863 Arginine repressor, C-terminal domain E4625_01125 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain E4625_01125 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain E4625_01130 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4625_01130 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4625_01150 PF02666 Phosphatidylserine decarboxylase E4625_01160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_01160 PF02743 Cache domain E4625_01160 PF00672 HAMP domain E4625_01165 PF08212 Lipocalin-like domain E4625_01170 PF06719 AraC-type transcriptional regulator N-terminus E4625_01170 PF12833 Helix-turn-helix domain E4625_01175 PF00465 Iron-containing alcohol dehydrogenase E4625_01180 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E4625_01180 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E4625_01180 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch E4625_01185 PF02233 NAD(P) transhydrogenase beta subunit E4625_01195 PF03313 Serine dehydratase alpha chain E4625_01200 PF00375 Sodium:dicarboxylate symporter family E4625_01205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4625_01205 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4625_01210 PF13525 Outer membrane lipoprotein E4625_01215 PF00849 RNA pseudouridylate synthase E4625_01215 PF01479 S4 domain E4625_01230 PF07724 AAA domain (Cdc48 subfamily) E4625_01230 PF10431 C-terminal, D2-small domain, of ClpB protein E4625_01230 PF00004 ATPase family associated with various cellular activities (AAA) E4625_01230 PF17871 AAA lid domain E4625_01230 PF02861 Clp amino terminal domain, pathogenicity island component E4625_01245 PF03590 Aspartate-ammonia ligase E4625_01250 PF01037 Lrp/AsnC ligand binding domain E4625_01260 PF10063 Uncharacterized integral membrane protein (DUF2301) E4625_01265 PF00571 CBS domain E4625_01265 PF00478 IMP dehydrogenase / GMP reductase domain E4625_01285 PF00512 His Kinase A (phospho-acceptor) domain E4625_01285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_01295 PF00072 Response regulator receiver domain E4625_01295 PF00158 Sigma-54 interaction domain E4625_01300 PF06496 Protein of unknown function (DUF1097) E4625_01310 PF00174 Oxidoreductase molybdopterin binding domain E4625_01315 PF01794 Ferric reductase like transmembrane component E4625_01330 PF00486 Transcriptional regulatory protein, C terminal E4625_01330 PF00072 Response regulator receiver domain E4625_01335 PF08918 PhoQ Sensor E4625_01335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_01345 PF18364 Molybdopterin oxidoreductase N-terminal domain E4625_01345 PF00384 Molybdopterin oxidoreductase E4625_01345 PF01568 Molydopterin dinucleotide binding domain E4625_01350 PF03264 NapC/NirT cytochrome c family, N-terminal region E4625_01355 PF01131 DNA topoisomerase E4625_01355 PF01751 Toprim domain E4625_01370 PF12852 Cupin E4625_01370 PF12833 Helix-turn-helix domain E4625_01375 PF02386 Cation transport protein E4625_01380 PF02254 TrkA-N domain E4625_01380 PF02080 TrkA-C domain E4625_01385 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain E4625_01385 PF01565 FAD binding domain E4625_01390 PF08279 HTH domain E4625_01390 PF02237 Biotin protein ligase C terminal domain E4625_01390 PF03099 Biotin/lipoate A/B protein ligase family E4625_01395 PF00485 Phosphoribulokinase / Uridine kinase family E4625_01410 PF03144 Elongation factor Tu domain 2 E4625_01410 PF03143 Elongation factor Tu C-terminal domain E4625_01410 PF00009 Elongation factor Tu GTP binding domain E4625_01420 PF00584 SecE/Sec61-gamma subunits of protein translocation complex E4625_01425 PF00467 KOW motif E4625_01425 PF02357 Transcription termination factor nusG E4625_01430 PF03946 Ribosomal protein L11, N-terminal domain E4625_01430 PF00298 Ribosomal protein L11, RNA binding domain E4625_01435 PF00687 Ribosomal protein L1p/L10e family E4625_01440 PF00466 Ribosomal protein L10 E4625_01445 PF00542 Ribosomal protein L7/L12 C-terminal domain E4625_01445 PF16320 Ribosomal protein L7/L12 dimerisation domain E4625_01450 PF04561 RNA polymerase Rpb2, domain 2 E4625_01450 PF10385 RNA polymerase beta subunit external 1 domain E4625_01450 PF04565 RNA polymerase Rpb2, domain 3 E4625_01450 PF04560 RNA polymerase Rpb2, domain 7 E4625_01450 PF04563 RNA polymerase beta subunit E4625_01450 PF00562 RNA polymerase Rpb2, domain 6 E4625_01455 PF04983 RNA polymerase Rpb1, domain 3 E4625_01455 PF04998 RNA polymerase Rpb1, domain 5 E4625_01455 PF04997 RNA polymerase Rpb1, domain 1 E4625_01455 PF00623 RNA polymerase Rpb1, domain 2 E4625_01455 PF05000 RNA polymerase Rpb1, domain 4 E4625_01460 PF13309 HTH domain E4625_01460 PF08348 YheO-like PAS domain E4625_01465 PF01042 Endoribonuclease L-PSP E4625_01470 PF02635 DsrE/DsrF-like family E4625_01475 PF02635 DsrE/DsrF-like family E4625_01480 PF04077 DsrH like protein E4625_01485 PF00164 Ribosomal protein S12/S23 E4625_01490 PF00177 Ribosomal protein S7p/S5e E4625_01495 PF00009 Elongation factor Tu GTP binding domain E4625_01495 PF03144 Elongation factor Tu domain 2 E4625_01495 PF00679 Elongation factor G C-terminus E4625_01495 PF14492 Elongation Factor G, domain II E4625_01495 PF03764 Elongation factor G, domain IV E4625_01500 PF00009 Elongation factor Tu GTP binding domain E4625_01500 PF03144 Elongation factor Tu domain 2 E4625_01500 PF03143 Elongation factor Tu C-terminal domain E4625_01545 PF00860 Permease family E4625_01550 PF02733 Dak1 domain E4625_01555 PF02734 DAK2 domain E4625_01560 PF00381 PTS HPr component phosphorylation site E4625_01560 PF00391 PEP-utilising enzyme, mobile domain E4625_01560 PF05524 PEP-utilising enzyme, N-terminal E4625_01560 PF03610 PTS system fructose IIA component E4625_01565 PF00465 Iron-containing alcohol dehydrogenase E4625_01570 PF02954 Bacterial regulatory protein, Fis family E4625_01570 PF00989 PAS fold E4625_01570 PF00158 Sigma-54 interaction domain E4625_01575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_01575 PF03466 LysR substrate binding domain E4625_01580 PF04371 Porphyromonas-type peptidyl-arginine deiminase E4625_01590 PF01594 AI-2E family transporter E4625_01595 PF00293 NUDIX domain E4625_01620 PF06628 Catalase-related immune-responsive E4625_01620 PF00199 Catalase E4625_01625 PF00583 Acetyltransferase (GNAT) family E4625_01645 PF00990 Diguanylate cyclase, GGDEF domain E4625_01645 PF17158 Membrane-associated sensor, integral membrane domain E4625_01655 PF08402 TOBE domain E4625_01655 PF00005 ABC transporter E4625_01665 PF00528 Binding-protein-dependent transport system inner membrane component E4625_01680 PF07702 UTRA domain E4625_01680 PF00392 Bacterial regulatory proteins, gntR family E4625_01695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_01695 PF03466 LysR substrate binding domain E4625_01705 PF02678 Pirin E4625_01705 PF17954 Quercetinase C-terminal cupin domain E4625_01710 PF07681 DoxX E4625_01715 PF17946 RecC C-terminal domain E4625_01720 PF12705 PD-(D/E)XK nuclease superfamily E4625_01720 PF00580 UvrD/REP helicase N-terminal domain E4625_01720 PF13361 UvrD-like helicase C-terminal domain E4625_01725 PF13538 UvrD-like helicase C-terminal domain E4625_01735 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) E4625_01745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4625_01755 PF07694 5TMR of 5TMR-LYT E4625_01755 PF00990 Diguanylate cyclase, GGDEF domain E4625_01780 PF00486 Transcriptional regulatory protein, C terminal E4625_01780 PF00072 Response regulator receiver domain E4625_01785 PF00512 His Kinase A (phospho-acceptor) domain E4625_01785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_01785 PF00672 HAMP domain E4625_01790 PF00990 Diguanylate cyclase, GGDEF domain E4625_01790 PF08448 PAS fold E4625_01795 PF07715 TonB-dependent Receptor Plug Domain E4625_01795 PF00593 TonB dependent receptor E4625_01800 PF00313 'Cold-shock' DNA-binding domain E4625_01810 PF01545 Cation efflux family E4625_01810 PF16916 Dimerisation domain of Zinc Transporter E4625_01825 PF00436 Single-strand binding protein family E4625_01830 PF00196 Bacterial regulatory proteins, luxR family E4625_01835 PF00005 ABC transporter E4625_01835 PF17760 UvrA interaction domain E4625_01835 PF17755 UvrA DNA-binding domain E4625_01840 PF00990 Diguanylate cyclase, GGDEF domain E4625_01840 PF17158 Membrane-associated sensor, integral membrane domain E4625_01845 PF03922 OmpW family E4625_01850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_01850 PF00672 HAMP domain E4625_01865 PF02219 Methylenetetrahydrofolate reductase E4625_01875 PF03594 Benzoate membrane transport protein E4625_01880 PF07883 Cupin domain E4625_01880 PF01381 Helix-turn-helix E4625_01915 PF04363 Protein of unknown function (DUF496) E4625_01925 PF04751 Protein of unknown function (DUF615) E4625_01930 PF01523 Putative modulator of DNA gyrase E4625_01935 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4625_01940 PF01722 BolA-like protein E4625_01950 PF05494 MlaC protein E4625_01955 PF02470 MlaD protein E4625_01960 PF02405 Permease MlaE E4625_01965 PF00005 ABC transporter E4625_01970 PF01380 SIS domain E4625_01970 PF00571 CBS domain E4625_01980 PF06835 Lipopolysaccharide-assembly, LptC-related E4625_01985 PF03968 OstA-like protein E4625_01990 PF00005 ABC transporter E4625_01990 PF12399 Branched-chain amino acid ATP-binding cassette transporter E4625_01995 PF04552 Sigma-54, DNA binding domain E4625_01995 PF00309 Sigma-54 factor, Activator interacting domain (AID) E4625_01995 PF04963 Sigma-54 factor, core binding domain E4625_02000 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein E4625_02005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4625_02010 PF03668 P-loop ATPase protein family E4625_02015 PF00381 PTS HPr component phosphorylation site E4625_02020 PF00874 PRD domain E4625_02020 PF08279 HTH domain E4625_02020 PF05043 Mga helix-turn-helix domain E4625_02020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4625_02025 PF07071 KDGP aldolase E4625_02030 PF03841 L-seryl-tRNA selenium transferase E4625_02035 PF01979 Amidohydrolase family E4625_02065 PF13180 PDZ domain E4625_02070 PF00595 PDZ domain E4625_02070 PF13180 PDZ domain E4625_02080 PF03969 AFG1-like ATPase E4625_02085 PF00572 Ribosomal protein L13 E4625_02090 PF00380 Ribosomal protein S9/S16 E4625_02095 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal E4625_02095 PF00355 Rieske [2Fe-2S] domain E4625_02100 PF00032 Cytochrome b(C-terminal)/b6/petD E4625_02100 PF00033 Cytochrome b/b6/petB E4625_02105 PF02167 Cytochrome C1 family E4625_02110 PF02798 Glutathione S-transferase, N-terminal domain E4625_02110 PF00043 Glutathione S-transferase, C-terminal domain E4625_02115 PF04386 Stringent starvation protein B E4625_02120 PF04972 BON domain E4625_02125 PF13580 SIS domain E4625_02130 PF02021 Uncharacterised protein family UPF0102 E4625_02135 PF04348 LppC putative lipoprotein E4625_02140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4625_02150 PF02381 MraZ protein, putative antitoxin-like E4625_02155 PF01795 MraW methylase family E4625_02160 PF04999 Cell division protein FtsL E4625_02165 PF03717 Penicillin-binding Protein dimerisation domain E4625_02165 PF00905 Penicillin binding protein transpeptidase domain E4625_02170 PF08245 Mur ligase middle domain E4625_02170 PF01225 Mur ligase family, catalytic domain E4625_02170 PF02875 Mur ligase family, glutamate ligase domain E4625_02175 PF02875 Mur ligase family, glutamate ligase domain E4625_02175 PF08245 Mur ligase middle domain E4625_02175 PF01225 Mur ligase family, catalytic domain E4625_02180 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 E4625_02180 PF00953 Glycosyl transferase family 4 E4625_02185 PF08245 Mur ligase middle domain E4625_02185 PF02875 Mur ligase family, glutamate ligase domain E4625_02190 PF01098 Cell cycle protein E4625_02195 PF03033 Glycosyltransferase family 28 N-terminal domain E4625_02195 PF04101 Glycosyltransferase family 28 C-terminal domain E4625_02200 PF08245 Mur ligase middle domain E4625_02200 PF02875 Mur ligase family, glutamate ligase domain E4625_02200 PF01225 Mur ligase family, catalytic domain E4625_02205 PF03799 Cell division protein FtsQ E4625_02205 PF08478 POTRA domain, FtsQ-type E4625_02210 PF02491 SHS2 domain inserted in FTSA E4625_02215 PF12327 FtsZ family, C-terminal domain E4625_02215 PF00091 Tubulin/FtsZ family, GTPase domain E4625_02220 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase E4625_02230 PF01043 SecA preprotein cross-linking domain E4625_02230 PF07516 SecA Wing and Scaffold domain E4625_02230 PF07517 SecA DEAD-like domain E4625_02230 PF02810 SEC-C motif E4625_02240 PF00293 NUDIX domain E4625_02245 PF03884 DNA gyrase inhibitor YacG E4625_02250 PF07072 Cell division protein E4625_02255 PF01121 Dephospho-CoA kinase E4625_02260 PF06750 Bacterial Peptidase A24 N-terminal domain E4625_02260 PF01478 Type IV leader peptidase family E4625_02265 PF00482 Type II secretion system (T2SS), protein F E4625_02270 PF00437 Type II/IV secretion system protein E4625_02270 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain E4625_02285 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain E4625_02285 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain E4625_02295 PF01510 N-acetylmuramoyl-L-alanine amidase E4625_02300 PF00392 Bacterial regulatory proteins, gntR family E4625_02300 PF07729 FCD domain E4625_02305 PF17831 Pyruvate dehydrogenase E1 component middle domain E4625_02305 PF00456 Transketolase, thiamine diphosphate binding domain E4625_02310 PF00364 Biotin-requiring enzyme E4625_02310 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E4625_02310 PF02817 e3 binding domain E4625_02315 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4625_02315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4625_02320 PF00990 Diguanylate cyclase, GGDEF domain E4625_02320 PF05230 MASE2 domain E4625_02330 PF12729 Four helix bundle sensory module for signal transduction E4625_02330 PF00672 HAMP domain E4625_02330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_02335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_02335 PF00672 HAMP domain E4625_02335 PF12729 Four helix bundle sensory module for signal transduction E4625_02340 PF01734 Patatin-like phospholipase E4625_02345 PF11791 Aconitate B N-terminal domain E4625_02345 PF06434 Aconitate hydratase 2 N-terminus E4625_02345 PF00330 Aconitase family (aconitate hydratase) E4625_02350 PF00563 EAL domain E4625_02350 PF12792 CSS motif domain associated with EAL E4625_02355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_02355 PF03466 LysR substrate binding domain E4625_02360 PF01810 LysE type translocator E4625_02365 PF04030 D-arabinono-1,4-lactone oxidase E4625_02365 PF01565 FAD binding domain E4625_02370 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4625_02370 PF07683 Cobalamin synthesis protein cobW C-terminal domain E4625_02375 PF07690 Major Facilitator Superfamily E4625_02385 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) E4625_02390 PF02152 Dihydroneopterin aldolase E4625_02395 PF02660 Glycerol-3-phosphate acyltransferase E4625_02440 PF01584 CheW-like domain E4625_02440 PF00072 Response regulator receiver domain E4625_02450 PF05127 Helicase E4625_02450 PF08351 Domain of unknown function (DUF1726) E4625_02450 PF13718 GNAT acetyltransferase 2 E4625_02450 PF17176 tRNA-binding domain E4625_02465 PF00210 Ferritin-like domain E4625_02475 PF02142 MGS-like domain E4625_02490 PF17763 Glutaminase/Asparaginase C-terminal domain E4625_02490 PF00710 Asparaginase, N-terminal E4625_02505 PF00356 Bacterial regulatory proteins, lacI family E4625_02510 PF02378 Phosphotransferase system, EIIC E4625_02510 PF00367 phosphotransferase system, EIIB E4625_02515 PF00128 Alpha amylase, catalytic domain E4625_02515 PF11941 Domain of unknown function (DUF3459) E4625_02520 PF14602 Hexapeptide repeat of succinyl-transferase E4625_02520 PF12464 Maltose acetyltransferase E4625_02525 PF01037 Lrp/AsnC ligand binding domain E4625_02530 PF00892 EamA-like transporter family E4625_02540 PF00171 Aldehyde dehydrogenase family E4625_02545 PF00528 Binding-protein-dependent transport system inner membrane component E4625_02550 PF00528 Binding-protein-dependent transport system inner membrane component E4625_02555 PF08402 TOBE domain E4625_02555 PF00005 ABC transporter E4625_02560 PF13416 Bacterial extracellular solute-binding protein E4625_02565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_02565 PF03466 LysR substrate binding domain E4625_02570 PF03553 Na+/H+ antiporter family E4625_02610 PF00534 Glycosyl transferases group 1 E4625_02610 PF08323 Starch synthase catalytic domain E4625_02615 PF00483 Nucleotidyl transferase E4625_02620 PF05175 Methyltransferase small domain E4625_02620 PF08468 Methyltransferase small domain N-terminal E4625_02625 PF00701 Dihydrodipicolinate synthetase family E4625_02630 PF00360 Phytochrome region E4625_02630 PF00563 EAL domain E4625_02630 PF00990 Diguanylate cyclase, GGDEF domain E4625_02630 PF01590 GAF domain E4625_02640 PF13419 Haloacid dehalogenase-like hydrolase E4625_02645 PF17209 Hfq protein E4625_02650 PF04403 Paraquat-inducible protein A E4625_02655 PF02470 MlaD protein E4625_02660 PF03886 ABC-type transport auxiliary lipoprotein component E4625_02665 PF01389 OmpA-like transmembrane domain E4625_02665 PF00691 OmpA family E4625_02675 PF00657 GDSL-like Lipase/Acylhydrolase E4625_02680 PF04076 Bacterial OB fold (BOF) protein E4625_02685 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain E4625_02685 PF01464 Transglycosylase SLT domain E4625_02690 PF04362 Bacterial Fe(2+) trafficking E4625_02695 PF10576 Iron-sulfur binding domain of endonuclease III E4625_02695 PF00633 Helix-hairpin-helix motif E4625_02695 PF00730 HhH-GPD superfamily base excision DNA repair protein E4625_02695 PF14815 NUDIX domain E4625_02700 PF16537 Type II secretion system protein B E4625_02705 PF01471 Putative peptidoglycan binding domain E4625_02705 PF13401 AAA domain E4625_02710 PF01966 HD domain E4625_02710 PF01743 Poly A polymerase head domain E4625_02710 PF12627 Probable RNA and SrmB- binding site of polymerase A E4625_02725 PF04172 LrgB-like family E4625_02730 PF03788 LrgA family E4625_02735 PF03466 LysR substrate binding domain E4625_02735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_02740 PF00392 Bacterial regulatory proteins, gntR family E4625_02740 PF00155 Aminotransferase class I and II E4625_02760 PF07350 Protein of unknown function (DUF1479) E4625_02765 PF04073 Aminoacyl-tRNA editing domain E4625_02770 PF01384 Phosphate transporter family E4625_02775 PF01865 Protein of unknown function DUF47 E4625_02790 PF03279 Bacterial lipid A biosynthesis acyltransferase E4625_02795 PF01467 Cytidylyltransferase-like E4625_02795 PF00294 pfkB family carbohydrate kinase E4625_02800 PF02321 Outer membrane efflux protein E4625_02805 PF00293 NUDIX domain E4625_02810 PF06853 Protein of unknown function (DUF1249) E4625_02815 PF00149 Calcineurin-like phosphoesterase E4625_02820 PF05728 Uncharacterised protein family (UPF0227) E4625_02825 PF00293 NUDIX domain E4625_02835 PF07869 Protein of unknown function (DUF1656) E4625_02840 PF00529 HlyD membrane-fusion protein of T1SS E4625_02840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4625_02845 PF04632 Fusaric acid resistance protein family E4625_02850 PF00204 DNA gyrase B E4625_02850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_02850 PF00986 DNA gyrase B subunit, carboxyl terminus E4625_02850 PF01751 Toprim domain E4625_02855 PF00521 DNA gyrase/topoisomerase IV, subunit A E4625_02855 PF03989 DNA gyrase C-terminal domain, beta-propeller E4625_02860 PF13676 TIR domain E4625_02890 PF00226 DnaJ domain E4625_02890 PF01556 DnaJ C terminal domain E4625_02890 PF00684 DnaJ central domain E4625_02895 PF00578 AhpC/TSA family E4625_02915 PF01553 Acyltransferase E4625_02920 PF04012 PspA/IM30 family E4625_02935 PF01541 GIY-YIG catalytic domain E4625_02945 PF00892 EamA-like transporter family E4625_02950 PF03167 Uracil DNA glycosylase superfamily E4625_02955 PF00892 EamA-like transporter family E4625_02960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_02960 PF03466 LysR substrate binding domain E4625_02965 PF00950 ABC 3 transport family E4625_02970 PF00005 ABC transporter E4625_02975 PF01297 Zinc-uptake complex component A periplasmic E4625_02995 PF08525 Opacity-associated protein A N-terminal motif E4625_02995 PF01551 Peptidase family M23 E4625_02995 PF01476 LysM domain E4625_03000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4625_03000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4625_03005 PF04222 Protein of unknown function (DUF416) E4625_03020 PF02028 BCCT, betaine/carnitine/choline family transporter E4625_03025 PF05190 MutS family domain IV E4625_03025 PF05192 MutS domain III E4625_03025 PF00488 MutS domain V E4625_03025 PF05188 MutS domain II E4625_03025 PF01624 MutS domain I E4625_03030 PF02464 Competence-damaged protein E4625_03035 PF00154 recA bacterial DNA recombination protein E4625_03040 PF02631 RecX family E4625_03045 PF02272 DHHA1 domain E4625_03045 PF01411 tRNA synthetases class II (A) E4625_03045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4625_03050 PF00696 Amino acid kinase family E4625_03050 PF01842 ACT domain E4625_03050 PF13840 ACT domain E4625_03055 PF02599 Global regulator protein family E4625_03090 PF00768 D-alanyl-D-alanine carboxypeptidase E4625_03095 PF09335 SNARE associated Golgi protein E4625_03100 PF03471 Transporter associated domain E4625_03100 PF00571 CBS domain E4625_03100 PF01595 Cyclin M transmembrane N-terminal domain E4625_03105 PF08264 Anticodon-binding domain of tRNA E4625_03105 PF00133 tRNA synthetases class I (I, L, M and V) E4625_03105 PF10458 Valyl tRNA synthetase tRNA binding arm E4625_03110 PF04364 DNA polymerase III chi subunit, HolC E4625_03115 PF02789 Cytosol aminopeptidase family, N-terminal domain E4625_03115 PF00883 Cytosol aminopeptidase family, catalytic domain E4625_03120 PF03739 Lipopolysaccharide export system permease LptF/LptG E4625_03125 PF03739 Lipopolysaccharide export system permease LptF/LptG E4625_03140 PF00909 Ammonium Transporter Family E4625_03145 PF05958 tRNA (Uracil-5-)-methyltransferase E4625_03145 PF01938 TRAM domain E4625_03155 PF07963 Prokaryotic N-terminal methylation motif E4625_03155 PF00114 Pilin (bacterial filament) E4625_03160 PF01026 TatD related DNase E4625_03165 PF01773 Na+ dependent nucleoside transporter N-terminus E4625_03165 PF07662 Na+ dependent nucleoside transporter C-terminus E4625_03165 PF07670 Nucleoside recognition E4625_03175 PF01791 DeoC/LacD family aldolase E4625_03180 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain E4625_03180 PF00591 Glycosyl transferase family, a/b domain E4625_03180 PF02885 Glycosyl transferase family, helical bundle domain E4625_03185 PF01676 Metalloenzyme superfamily E4625_03190 PF01048 Phosphorylase superfamily E4625_03195 PF05231 MASE1 E4625_03195 PF00990 Diguanylate cyclase, GGDEF domain E4625_03195 PF00563 EAL domain E4625_03195 PF08448 PAS fold E4625_03195 PF13426 PAS domain E4625_03195 PF08447 PAS fold E4625_03205 PF18429 Domain of unknown function (DUF5609) E4625_03220 PF18073 Rubredoxin metal binding domain E4625_03225 PF07238 PilZ domain E4625_03230 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ E4625_03240 PF00216 Bacterial DNA-binding protein E4625_03255 PF01207 Dihydrouridine synthase (Dus) E4625_03260 PF01475 Ferric uptake regulator family E4625_03275 PF05525 Branched-chain amino acid transport protein E4625_03280 PF05525 Branched-chain amino acid transport protein E4625_03285 PF05175 Methyltransferase small domain E4625_03290 PF00270 DEAD/DEAH box helicase E4625_03290 PF00271 Helicase conserved C-terminal domain E4625_03295 PF03883 Peroxide stress protein YaaA E4625_03300 PF00437 Type II/IV secretion system protein E4625_03305 PF00437 Type II/IV secretion system protein E4625_03310 PF01168 Alanine racemase, N-terminal domain E4625_03315 PF03807 NADP oxidoreductase coenzyme F420-dependent E4625_03315 PF14748 Pyrroline-5-carboxylate reductase dimerisation E4625_03320 PF02325 YGGT family E4625_03325 PF02594 Uncharacterised ACR, YggU family COG1872 E4625_03340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4625_03350 PF00132 Bacterial transferase hexapeptide (six repeats) E4625_03355 PF10952 Protein of unknown function (DUF2753) E4625_03360 PF00378 Enoyl-CoA hydratase/isomerase E4625_03375 PF00106 short chain dehydrogenase E4625_03380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4625_03380 PF04073 Aminoacyl-tRNA editing domain E4625_03380 PF03129 Anticodon binding domain E4625_03385 PF00672 HAMP domain E4625_03385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_03390 PF01330 RuvA N terminal domain E4625_03390 PF07499 RuvA, C-terminal domain E4625_03395 PF17864 RuvB AAA lid domain E4625_03395 PF05496 Holliday junction DNA helicase RuvB P-loop domain E4625_03395 PF05491 RuvB C-terminal winged helix domain E4625_03400 PF01654 Cytochrome bd terminal oxidase subunit I E4625_03405 PF02322 Cytochrome bd terminal oxidase subunit II E4625_03410 PF08173 Membrane bound YbgT-like protein E4625_03415 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) E4625_03420 PF03061 Thioesterase superfamily E4625_03425 PF01618 MotA/TolQ/ExbB proton channel family E4625_03430 PF02472 Biopolymer transport protein ExbD/TolR E4625_03440 PF04052 TolB amino-terminal domain E4625_03440 PF07676 WD40-like Beta Propeller Repeat E4625_03445 PF00691 OmpA family E4625_03450 PF13174 Tetratricopeptide repeat E4625_03450 PF16331 TolA binding protein trimerisation E4625_03530 PF00672 HAMP domain E4625_03530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_03535 PF02445 Quinolinate synthetase A protein E4625_03540 PF01263 Aldose 1-epimerase E4625_03545 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E4625_03545 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E4625_03550 PF02446 4-alpha-glucanotransferase E4625_03555 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E4625_03555 PF02806 Alpha amylase, C-terminal all-beta domain E4625_03555 PF00128 Alpha amylase, catalytic domain E4625_03560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E4625_03560 PF00128 Alpha amylase, catalytic domain E4625_03565 PF01641 SelR domain E4625_03575 PF00293 NUDIX domain E4625_03580 PF16884 N-terminal domain of oxidoreductase E4625_03580 PF00107 Zinc-binding dehydrogenase E4625_03585 PF02566 OsmC-like protein E4625_03590 PF01047 MarR family E4625_03605 PF01037 Lrp/AsnC ligand binding domain E4625_03620 PF07690 Major Facilitator Superfamily E4625_03640 PF00209 Sodium:neurotransmitter symporter family E4625_03650 PF00209 Sodium:neurotransmitter symporter family E4625_03675 PF00392 Bacterial regulatory proteins, gntR family E4625_03675 PF00155 Aminotransferase class I and II E4625_03680 PF01810 LysE type translocator E4625_03685 PF01177 Asp/Glu/Hydantoin racemase E4625_03690 PF07732 Multicopper oxidase E4625_03690 PF07731 Multicopper oxidase E4625_03690 PF00394 Multicopper oxidase E4625_03700 PF04074 YhcH/YjgK/YiaL E4625_03705 PF00871 Acetokinase family E4625_03710 PF00924 Mechanosensitive ion channel E4625_03715 PF03734 L,D-transpeptidase catalytic domain E4625_03715 PF17969 L,D-transpeptidase C-terminal domain E4625_03720 PF00474 Sodium:solute symporter family E4625_03730 PF05717 IS66 Orf2 like protein E4625_03735 PF03050 Transposase IS66 family E4625_03735 PF13817 IS66 C-terminal element E4625_03735 PF13007 Transposase C of IS166 homeodomain E4625_03735 PF13005 zinc-finger binding domain of transposase IS66 E4625_03745 PF13411 MerR HTH family regulatory protein E4625_03760 PF10463 Peptidase U49 E4625_03780 PF02525 Flavodoxin-like fold E4625_03785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_03785 PF03466 LysR substrate binding domain E4625_03790 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ E4625_03800 PF00005 ABC transporter E4625_03800 PF12848 ABC transporter E4625_03805 PF00571 CBS domain E4625_03805 PF01380 SIS domain E4625_03810 PF01957 NfeD-like C-terminal, partner-binding E4625_03815 PF01145 SPFH domain / Band 7 family E4625_03815 PF16200 C-terminal region of band_7 E4625_03820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4625_03820 PF14824 Sirohaem biosynthesis protein central E4625_03820 PF10414 Sirohaem synthase dimerisation region E4625_03825 PF01507 Phosphoadenosine phosphosulfate reductase family E4625_03830 PF00009 Elongation factor Tu GTP binding domain E4625_03835 PF02080 TrkA-C domain E4625_03835 PF03600 Citrate transporter E4625_03870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_03870 PF08447 PAS fold E4625_03890 PF00005 ABC transporter E4625_03905 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) E4625_03925 PF00719 Inorganic pyrophosphatase E4625_03930 PF08245 Mur ligase middle domain E4625_03930 PF01225 Mur ligase family, catalytic domain E4625_03930 PF02875 Mur ligase family, glutamate ligase domain E4625_03935 PF02441 Flavoprotein E4625_03940 PF00440 Bacterial regulatory proteins, tetR family E4625_03945 PF00156 Phosphoribosyl transferase domain E4625_03950 PF00005 ABC transporter E4625_03955 PF01061 ABC-2 type transporter E4625_03960 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component E4625_03965 PF01869 BadF/BadG/BcrA/BcrD ATPase family E4625_03985 PF02569 Pantoate-beta-alanine ligase E4625_03990 PF02548 Ketopantoate hydroxymethyltransferase E4625_03995 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) E4625_04000 PF01743 Poly A polymerase head domain E4625_04000 PF12626 Polymerase A arginine-rich C-terminus E4625_04000 PF12627 Probable RNA and SrmB- binding site of polymerase A E4625_04005 PF00749 tRNA synthetases class I (E and Q), catalytic domain E4625_04010 PF01258 Prokaryotic dksA/traR C4-type zinc finger E4625_04015 PF03749 Sugar fermentation stimulation protein RE domain E4625_04015 PF17746 SfsA N-terminal OB domain E4625_04025 PF08482 ATP-dependent helicase C-terminal E4625_04025 PF04408 Helicase associated domain (HA2) E4625_04025 PF00271 Helicase conserved C-terminal domain E4625_04025 PF00270 DEAD/DEAH box helicase E4625_04030 PF00912 Transglycosylase E4625_04030 PF00905 Penicillin binding protein transpeptidase domain E4625_04030 PF14814 Bifunctional transglycosylase second domain E4625_04035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4625_04040 PF00893 Small Multidrug Resistance protein E4625_04045 PF00893 Small Multidrug Resistance protein E4625_04055 PF11849 Domain of unknown function (DUF3369) E4625_04065 PF01569 PAP2 superfamily E4625_04085 PF00202 Aminotransferase class-III E4625_04090 PF00654 Voltage gated chloride channel E4625_04100 PF01521 Iron-sulphur cluster biosynthesis E4625_04125 PF01810 LysE type translocator E4625_04130 PF02954 Bacterial regulatory protein, Fis family E4625_04135 PF01207 Dihydrouridine synthase (Dus) E4625_04140 PF02321 Outer membrane efflux protein E4625_04145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4625_04175 PF00072 Response regulator receiver domain E4625_04180 PF00854 POT family E4625_04185 PF00483 Nucleotidyl transferase E4625_04195 PF00459 Inositol monophosphatase family E4625_04200 PF03795 YCII-related domain E4625_04205 PF04279 Intracellular septation protein A E4625_04210 PF00282 Pyridoxal-dependent decarboxylase conserved domain E4625_04215 PF03006 Haemolysin-III related E4625_04220 PF06826 Predicted Permease Membrane Region E4625_04220 PF02080 TrkA-C domain E4625_04320 PF00072 Response regulator receiver domain E4625_04320 PF01584 CheW-like domain E4625_04325 PF13472 GDSL-like Lipase/Acylhydrolase family E4625_04330 PF00005 ABC transporter E4625_04340 PF01370 NAD dependent epimerase/dehydratase family E4625_04340 PF08338 Domain of unknown function (DUF1731) E4625_04350 PF00155 Aminotransferase class I and II E4625_04355 PF01483 Proprotein convertase P-domain E4625_04355 PF04389 Peptidase family M28 E4625_04360 PF02390 Putative methyltransferase E4625_04365 PF04320 Protein with unknown function (DUF469) E4625_04370 PF04960 Glutaminase E4625_04375 PF00581 Rhodanese-like domain E4625_04385 PF06004 Bacterial protein of unknown function (DUF903) E4625_04390 PF00005 ABC transporter E4625_04390 PF00664 ABC transporter transmembrane region E4625_04395 PF00561 alpha/beta hydrolase fold E4625_04415 PF00801 PKD domain E4625_04415 PF05547 Immune inhibitor A peptidase M6 E4625_04425 PF06877 Regulator of ribonuclease activity B E4625_04430 PF03707 Bacterial signalling protein N terminal repeat E4625_04430 PF00990 Diguanylate cyclase, GGDEF domain E4625_04430 PF00563 EAL domain E4625_04440 PF12852 Cupin E4625_04440 PF12833 Helix-turn-helix domain E4625_04445 PF02627 Carboxymuconolactone decarboxylase family E4625_04450 PF04224 Protein of unknown function, DUF417 E4625_04465 PF09905 DNA-binding protein VF530 E4625_04470 PF02666 Phosphatidylserine decarboxylase E4625_04475 PF03193 RsgA GTPase E4625_04480 PF00929 Exonuclease E4625_04520 PF00313 'Cold-shock' DNA-binding domain E4625_04530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_04530 PF00672 HAMP domain E4625_04535 PF00749 tRNA synthetases class I (E and Q), catalytic domain E4625_04570 PF06483 Chitinase C E4625_04570 PF00704 Glycosyl hydrolases family 18 E4625_04585 PF02472 Biopolymer transport protein ExbD/TolR E4625_04590 PF01618 MotA/TolQ/ExbB proton channel family E4625_04595 PF01618 MotA/TolQ/ExbB proton channel family E4625_04605 PF00593 TonB dependent receptor E4625_04605 PF07715 TonB-dependent Receptor Plug Domain E4625_04610 PF00528 Binding-protein-dependent transport system inner membrane component E4625_04615 PF00528 Binding-protein-dependent transport system inner membrane component E4625_04615 PF12911 N-terminal TM domain of oligopeptide transport permease C E4625_04625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4625_04625 PF00005 ABC transporter E4625_04630 PF00005 ABC transporter E4625_04630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4625_04640 PF07687 Peptidase dimerisation domain E4625_04640 PF01546 Peptidase family M20/M25/M40 E4625_04655 PF00156 Phosphoribosyl transferase domain E4625_04665 PF07417 Sigma factor-binding transcriptional regulator Crl E4625_04670 PF01472 PUA domain E4625_04670 PF00696 Amino acid kinase family E4625_04675 PF00171 Aldehyde dehydrogenase family E4625_04685 PF00582 Universal stress protein family E4625_04705 PF00294 pfkB family carbohydrate kinase E4625_04710 PF04227 Indigoidine synthase A like protein E4625_04715 PF00194 Eukaryotic-type carbonic anhydrase E4625_04720 PF00034 Cytochrome c E4625_04720 PF03150 Di-haem cytochrome c peroxidase E4625_04755 PF00550 Phosphopantetheine attachment site E4625_04760 PF00550 Phosphopantetheine attachment site E4625_04770 PF00501 AMP-binding enzyme E4625_04770 PF13193 AMP-binding enzyme C-terminal domain E4625_04775 PF07977 FabA-like domain E4625_04785 PF00221 Aromatic amino acid lyase E4625_04810 PF02801 Beta-ketoacyl synthase, C-terminal domain E4625_04810 PF00109 Beta-ketoacyl synthase, N-terminal domain E4625_04825 PF02801 Beta-ketoacyl synthase, C-terminal domain E4625_04825 PF00109 Beta-ketoacyl synthase, N-terminal domain E4625_04835 PF00994 Probable molybdopterin binding domain E4625_04845 PF06738 Putative threonine/serine exporter E4625_04850 PF12821 Threonine/Serine exporter, ThrE E4625_04855 PF00186 Dihydrofolate reductase E4625_04860 PF00005 ABC transporter E4625_04860 PF00571 CBS domain E4625_04865 PF00528 Binding-protein-dependent transport system inner membrane component E4625_04870 PF04069 Substrate binding domain of ABC-type glycine betaine transport system E4625_04875 PF01507 Phosphoadenosine phosphosulfate reductase family E4625_04880 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E4625_04880 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E4625_04885 PF00258 Flavodoxin E4625_04885 PF00667 FAD binding domain E4625_04885 PF00175 Oxidoreductase NAD-binding domain E4625_04890 PF02567 Phenazine biosynthesis-like protein E4625_04895 PF00152 tRNA synthetases class II (D, K and N) E4625_04895 PF01336 OB-fold nucleic acid binding domain E4625_04905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_04905 PF02743 Cache domain E4625_04905 PF00672 HAMP domain E4625_04910 PF03616 Sodium/glutamate symporter E4625_04915 PF17763 Glutaminase/Asparaginase C-terminal domain E4625_04915 PF00710 Asparaginase, N-terminal E4625_04920 PF07023 Protein of unknown function (DUF1315) E4625_04925 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E4625_04925 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E4625_04940 PF01343 Peptidase family S49 E4625_04945 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4625_04945 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4625_04950 PF00881 Nitroreductase family E4625_04955 PF14602 Hexapeptide repeat of succinyl-transferase E4625_04955 PF12464 Maltose acetyltransferase E4625_04970 PF08240 Alcohol dehydrogenase GroES-like domain E4625_04970 PF00107 Zinc-binding dehydrogenase E4625_04975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_04975 PF03466 LysR substrate binding domain E4625_04980 PF02378 Phosphotransferase system, EIIC E4625_04980 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E4625_04980 PF00367 phosphotransferase system, EIIB E4625_04985 PF00474 Sodium:solute symporter family E4625_04995 PF02785 Biotin carboxylase C-terminal domain E4625_04995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E4625_04995 PF00289 Biotin carboxylase, N-terminal domain E4625_05000 PF00364 Biotin-requiring enzyme E4625_05005 PF01220 Dehydroquinase class II E4625_05010 PF13193 AMP-binding enzyme C-terminal domain E4625_05010 PF16177 Acetyl-coenzyme A synthetase N-terminus E4625_05010 PF00501 AMP-binding enzyme E4625_05020 PF00563 EAL domain E4625_05020 PF03707 Bacterial signalling protein N terminal repeat E4625_05020 PF13188 PAS domain E4625_05020 PF00990 Diguanylate cyclase, GGDEF domain E4625_05040 PF02613 Nitrate reductase delta subunit E4625_05050 PF00464 Serine hydroxymethyltransferase E4625_05060 PF03477 ATP cone domain E4625_05065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E4625_05065 PF01872 RibD C-terminal domain E4625_05070 PF00677 Lumazine binding domain E4625_05075 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase E4625_05075 PF00925 GTP cyclohydrolase II E4625_05085 PF00885 6,7-dimethyl-8-ribityllumazine synthase E4625_05090 PF01029 NusB family E4625_05095 PF02769 AIR synthase related protein, C-terminal domain E4625_05095 PF00586 AIR synthase related protein, N-terminal domain E4625_05100 PF04608 Phosphatidylglycerophosphatase A E4625_05105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4625_05105 PF00005 ABC transporter E4625_05110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4625_05120 PF12911 N-terminal TM domain of oligopeptide transport permease C E4625_05120 PF00528 Binding-protein-dependent transport system inner membrane component E4625_05125 PF02780 Transketolase, C-terminal domain E4625_05125 PF02779 Transketolase, pyrimidine binding domain E4625_05125 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E4625_05130 PF00348 Polyprenyl synthetase E4625_05135 PF02609 Exonuclease VII small subunit E4625_05140 PF01618 MotA/TolQ/ExbB proton channel family E4625_05145 PF00691 OmpA family E4625_05145 PF13677 Membrane MotB of proton-channel complex MotA/MotB E4625_05150 PF03449 Transcription elongation factor, N-terminal E4625_05150 PF01272 Transcription elongation factor, GreA/GreB, C-term E4625_05160 PF01985 CRS1 / YhbY (CRM) domain E4625_05165 PF01728 FtsJ-like methyltransferase E4625_05170 PF00004 ATPase family associated with various cellular activities (AAA) E4625_05170 PF17862 AAA+ lid domain E4625_05170 PF01434 Peptidase family M41 E4625_05170 PF06480 FtsH Extracellular E4625_05175 PF00809 Pterin binding enzyme E4625_05180 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4625_05180 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4625_05180 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4625_05180 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4625_05185 PF00121 Triosephosphate isomerase E4625_05190 PF03840 Preprotein translocase SecG subunit E4625_05205 PF02576 RimP N-terminal domain E4625_05205 PF17384 RimP C-terminal SH3 domain E4625_05210 PF08529 NusA N-terminal domain E4625_05210 PF00575 S1 RNA binding domain E4625_05210 PF13184 NusA-like KH domain E4625_05215 PF11987 Translation-initiation factor 2 E4625_05215 PF08364 Bacterial translation initiation factor IF-2 associated region E4625_05215 PF04760 Translation initiation factor IF-2, N-terminal region E4625_05215 PF00009 Elongation factor Tu GTP binding domain E4625_05220 PF02033 Ribosome-binding factor A E4625_05225 PF01509 TruB family pseudouridylate synthase (N terminal domain) E4625_05225 PF16198 tRNA pseudouridylate synthase B C-terminal domain E4625_05225 PF09157 Pseudouridine synthase II TruB, C-terminal E4625_05230 PF00312 Ribosomal protein S15 E4625_05235 PF03725 3' exoribonuclease family, domain 2 E4625_05235 PF00013 KH domain E4625_05235 PF00575 S1 RNA binding domain E4625_05235 PF01138 3' exoribonuclease family, domain 1 E4625_05235 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain E4625_05240 PF07690 Major Facilitator Superfamily E4625_05245 PF03707 Bacterial signalling protein N terminal repeat E4625_05245 PF00563 EAL domain E4625_05245 PF00990 Diguanylate cyclase, GGDEF domain E4625_05250 PF02635 DsrE/DsrF-like family E4625_05260 PF00206 Lyase E4625_05260 PF10415 Fumarase C C-terminus E4625_05265 PF03575 Peptidase family S51 E4625_05270 PF02554 Carbon starvation protein CstA E4625_05270 PF13722 5TM C-terminal transporter carbon starvation CstA E4625_05275 PF00072 Response regulator receiver domain E4625_05275 PF04397 LytTr DNA-binding domain E4625_05280 PF07694 5TMR of 5TMR-LYT E4625_05280 PF06580 Histidine kinase E4625_05285 PF00072 Response regulator receiver domain E4625_05285 PF00196 Bacterial regulatory proteins, luxR family E4625_05290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_05290 PF00512 His Kinase A (phospho-acceptor) domain E4625_05290 PF00989 PAS fold E4625_05295 PF13247 4Fe-4S dicluster domain E4625_05300 PF03916 Polysulphide reductase, NrfD E4625_05305 PF00384 Molybdopterin oxidoreductase E4625_05305 PF01568 Molydopterin dinucleotide binding domain E4625_05305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E4625_05325 PF02668 Taurine catabolism dioxygenase TauD, TfdA family E4625_05335 PF03734 L,D-transpeptidase catalytic domain E4625_05335 PF17969 L,D-transpeptidase C-terminal domain E4625_05345 PF01523 Putative modulator of DNA gyrase E4625_05350 PF01523 Putative modulator of DNA gyrase E4625_05355 PF00258 Flavodoxin E4625_05360 PF00589 Phage integrase family E4625_05360 PF02899 Phage integrase, N-terminal SAM-like domain E4625_05365 PF17158 Membrane-associated sensor, integral membrane domain E4625_05365 PF00990 Diguanylate cyclase, GGDEF domain E4625_05370 PF01741 Large-conductance mechanosensitive channel, MscL E4625_05375 PF13098 Thioredoxin-like domain E4625_05375 PF10411 Disulfide bond isomerase protein N-terminus E4625_05380 PF02272 DHHA1 domain E4625_05380 PF17768 RecJ OB domain E4625_05380 PF01368 DHH family E4625_05385 PF13411 MerR HTH family regulatory protein E4625_05400 PF02508 Rnf-Nqr subunit, membrane protein E4625_05405 PF06821 Serine hydrolase E4625_05415 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family E4625_05415 PF04055 Radical SAM superfamily E4625_05425 PF03099 Biotin/lipoate A/B protein ligase family E4625_05430 PF04359 Protein of unknown function (DUF493) E4625_05435 PF07943 Penicillin-binding protein 5, C-terminal domain E4625_05435 PF00768 D-alanyl-D-alanine carboxypeptidase E4625_05440 PF05036 Sporulation related domain E4625_05440 PF03330 Lytic transglycolase E4625_05445 PF13406 Transglycosylase SLT domain E4625_05450 PF01098 Cell cycle protein E4625_05455 PF01098 Cell cycle protein E4625_05460 PF00905 Penicillin binding protein transpeptidase domain E4625_05460 PF03717 Penicillin-binding Protein dimerisation domain E4625_05465 PF02590 Predicted SPOUT methyltransferase E4625_05475 PF01467 Cytidylyltransferase-like E4625_05495 PF00133 tRNA synthetases class I (I, L, M and V) E4625_05495 PF08264 Anticodon-binding domain of tRNA E4625_05495 PF13603 Leucyl-tRNA synthetase, Domain 2 E4625_05500 PF07295 Zinc-ribbon containing domain E4625_05505 PF00795 Carbon-nitrogen hydrolase E4625_05510 PF00571 CBS domain E4625_05510 PF03471 Transporter associated domain E4625_05515 PF02130 Uncharacterized protein family UPF0054 E4625_05520 PF02562 PhoH-like protein E4625_05525 PF00919 Uncharacterized protein family UPF0004 E4625_05525 PF04055 Radical SAM superfamily E4625_05525 PF01938 TRAM domain E4625_05530 PF01494 FAD binding domain E4625_05535 PF00857 Isochorismatase family E4625_05540 PF00313 'Cold-shock' DNA-binding domain E4625_05545 PF05230 MASE2 domain E4625_05545 PF00990 Diguanylate cyclase, GGDEF domain E4625_05560 PF13419 Haloacid dehalogenase-like hydrolase E4625_05570 PF00990 Diguanylate cyclase, GGDEF domain E4625_05570 PF08448 PAS fold E4625_05580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4625_05580 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4625_05590 PF09997 Predicted membrane protein (DUF2238) E4625_05595 PF09285 Elongation factor P, C-terminal E4625_05595 PF01132 Elongation factor P (EF-P) OB domain E4625_05595 PF08207 Elongation factor P (EF-P) KOW-like domain E4625_05605 PF00478 IMP dehydrogenase / GMP reductase domain E4625_05625 PF08521 Two-component sensor kinase N-terminal E4625_05625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_05625 PF00512 His Kinase A (phospho-acceptor) domain E4625_05630 PF00486 Transcriptional regulatory protein, C terminal E4625_05630 PF00072 Response regulator receiver domain E4625_05650 PF00501 AMP-binding enzyme E4625_05660 PF13649 Methyltransferase domain E4625_05665 PF06224 Winged helix DNA-binding domain E4625_05685 PF02313 Fumarate reductase subunit D E4625_05690 PF02300 Fumarate reductase subunit C E4625_05695 PF13085 2Fe-2S iron-sulfur cluster binding domain E4625_05695 PF13183 4Fe-4S dicluster domain E4625_05700 PF00890 FAD binding domain E4625_05700 PF02910 Fumarate reductase flavoprotein C-term E4625_05705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_05705 PF02743 Cache domain E4625_05705 PF00672 HAMP domain E4625_05710 PF03009 Glycerophosphoryl diester phosphodiesterase family E4625_05715 PF12794 Mechanosensitive ion channel inner membrane domain 1 E4625_05715 PF12795 Mechanosensitive ion channel porin domain E4625_05715 PF00924 Mechanosensitive ion channel E4625_05725 PF08525 Opacity-associated protein A N-terminal motif E4625_05725 PF01551 Peptidase family M23 E4625_05725 PF01476 LysM domain E4625_05740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_05740 PF03466 LysR substrate binding domain E4625_05755 PF00672 HAMP domain E4625_05755 PF02743 Cache domain E4625_05755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_05760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_05760 PF03466 LysR substrate binding domain E4625_05765 PF00905 Penicillin binding protein transpeptidase domain E4625_05765 PF00912 Transglycosylase E4625_05765 PF17092 Penicillin-binding protein OB-like domain E4625_05790 PF00263 Bacterial type II and III secretion system protein E4625_05790 PF03958 Bacterial type II/III secretion system short domain E4625_05790 PF07660 Secretin and TonB N terminus short domain E4625_05790 PF11741 AMIN domain E4625_05795 PF01202 Shikimate kinase E4625_05800 PF01761 3-dehydroquinate synthase E4625_05810 PF02086 D12 class N6 adenine-specific DNA methyltransferase E4625_05825 PF00834 Ribulose-phosphate 3 epimerase family E4625_05830 PF13419 Haloacid dehalogenase-like hydrolase E4625_05835 PF00579 tRNA synthetases class I (W and Y) E4625_05845 PF00117 Glutamine amidotransferase class-I E4625_05850 PF00202 Aminotransferase class-III E4625_05855 PF04958 Arginine N-succinyltransferase beta subunit E4625_05860 PF00171 Aldehyde dehydrogenase family E4625_05870 PF13419 Haloacid dehalogenase-like hydrolase E4625_05875 PF07690 Major Facilitator Superfamily E4625_05880 PF10371 Domain of unknown function E4625_05880 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E4625_05880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4625_05880 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E4625_05880 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E4625_05890 PF16657 Maltogenic Amylase, C-terminal domain E4625_05890 PF00128 Alpha amylase, catalytic domain E4625_05910 PF01048 Phosphorylase superfamily E4625_05915 PF04973 Nicotinamide mononucleotide transporter E4625_05920 PF02080 TrkA-C domain E4625_05920 PF03600 Citrate transporter E4625_05965 PF06071 Protein of unknown function (DUF933) E4625_05965 PF01926 50S ribosome-binding GTPase E4625_05970 PF01195 Peptidyl-tRNA hydrolase E4625_05975 PF02872 5'-nucleotidase, C-terminal domain E4625_05975 PF00149 Calcineurin-like phosphoesterase E4625_05980 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase E4625_05980 PF14572 Phosphoribosyl synthetase-associated domain E4625_05990 PF08544 GHMP kinases C terminal E4625_05990 PF00288 GHMP kinases N terminal domain E4625_05995 PF03550 Outer membrane lipoprotein LolB E4625_06000 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain E4625_06000 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain E4625_06000 PF01488 Shikimate / quinate 5-dehydrogenase E4625_06005 PF03462 PCRF domain E4625_06005 PF00472 RF-1 domain E4625_06010 PF13847 Methyltransferase domain E4625_06010 PF17827 PrmC N-terminal domain E4625_06020 PF13369 Transglutaminase-like superfamily E4625_06025 PF00793 DAHP synthetase I family E4625_06030 PF00375 Sodium:dicarboxylate symporter family E4625_06035 PF01228 Glycine radical E4625_06040 PF03167 Uracil DNA glycosylase superfamily E4625_06055 PF00923 Transaldolase/Fructose-6-phosphate aldolase E4625_06060 PF01235 Sodium:alanine symporter family E4625_06065 PF11992 Domain of unknown function (DUF3488) E4625_06065 PF01841 Transglutaminase-like superfamily E4625_06065 PF13559 Domain of unknown function (DUF4129) E4625_06075 PF17863 AAA lid domain E4625_06075 PF07726 ATPase family associated with various cellular activities (AAA) E4625_06080 PF00144 Beta-lactamase E4625_06085 PF00854 POT family E4625_06090 PF03652 Holliday junction resolvase E4625_06095 PF02622 Uncharacterized ACR, COG1678 E4625_06100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_06100 PF00672 HAMP domain E4625_06100 PF12729 Four helix bundle sensory module for signal transduction E4625_06105 PF02951 Prokaryotic glutathione synthetase, N-terminal domain E4625_06105 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain E4625_06110 PF04452 RNA methyltransferase E4625_06115 PF04231 Endonuclease I E4625_06120 PF17283 SprT-like zinc ribbon domain E4625_06120 PF10263 SprT-like family E4625_06125 PF02773 S-adenosylmethionine synthetase, C-terminal domain E4625_06125 PF02772 S-adenosylmethionine synthetase, central domain E4625_06125 PF00438 S-adenosylmethionine synthetase, N-terminal domain E4625_06130 PF02780 Transketolase, C-terminal domain E4625_06130 PF02779 Transketolase, pyrimidine binding domain E4625_06130 PF00456 Transketolase, thiamine diphosphate binding domain E4625_06140 PF01042 Endoribonuclease L-PSP E4625_06150 PF01965 DJ-1/PfpI family E4625_06155 PF03702 Anhydro-N-acetylmuramic acid kinase E4625_06160 PF01551 Peptidase family M23 E4625_06160 PF08525 Opacity-associated protein A N-terminal motif E4625_06160 PF01476 LysM domain E4625_06165 PF00579 tRNA synthetases class I (W and Y) E4625_06170 PF01204 Trehalase E4625_06180 PF01161 Phosphatidylethanolamine-binding protein E4625_06190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_06190 PF03466 LysR substrate binding domain E4625_06200 PF00155 Aminotransferase class I and II E4625_06205 PF07690 Major Facilitator Superfamily E4625_06210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_06210 PF03466 LysR substrate binding domain E4625_06215 PF00106 short chain dehydrogenase E4625_06220 PF01343 Peptidase family S49 E4625_06220 PF08496 Peptidase family S49 N-terminal E4625_06225 PF04996 Succinylarginine dihydrolase E4625_06230 PF08272 Topoisomerase I zinc-ribbon-like E4625_06230 PF01131 DNA topoisomerase E4625_06230 PF01751 Toprim domain E4625_06230 PF01396 Topoisomerase DNA binding C4 zinc finger E4625_06245 PF08447 PAS fold E4625_06245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_06250 PF00728 Glycosyl hydrolase family 20, catalytic domain E4625_06250 PF02838 Glycosyl hydrolase family 20, domain 2 E4625_06255 PF01869 BadF/BadG/BcrA/BcrD ATPase family E4625_06265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4625_06265 PF00005 ABC transporter E4625_06270 PF00005 ABC transporter E4625_06270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4625_06275 PF00528 Binding-protein-dependent transport system inner membrane component E4625_06275 PF12911 N-terminal TM domain of oligopeptide transport permease C E4625_06280 PF00528 Binding-protein-dependent transport system inner membrane component E4625_06285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4625_06290 PF09308 LuxQ, periplasmic E4625_06290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_06290 PF00072 Response regulator receiver domain E4625_06290 PF00512 His Kinase A (phospho-acceptor) domain E4625_06310 PF10725 Protein of unknown function (DUF2517) E4625_06320 PF05114 Protein of unknown function (DUF692) E4625_06340 PF08447 PAS fold E4625_06340 PF13426 PAS domain E4625_06340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_06350 PF04632 Fusaric acid resistance protein family E4625_06355 PF03453 MoeA N-terminal region (domain I and II) E4625_06355 PF03454 MoeA C-terminal region (domain IV) E4625_06355 PF00994 Probable molybdopterin binding domain E4625_06360 PF12804 MobA-like NTP transferase domain E4625_06365 PF00005 ABC transporter E4625_06370 PF00528 Binding-protein-dependent transport system inner membrane component E4625_06375 PF12849 PBP superfamily domain E4625_06380 PF00158 Sigma-54 interaction domain E4625_06380 PF00072 Response regulator receiver domain E4625_06380 PF02954 Bacterial regulatory protein, Fis family E4625_06385 PF00512 His Kinase A (phospho-acceptor) domain E4625_06385 PF00989 PAS fold E4625_06385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_06390 PF12727 PBP superfamily domain E4625_06390 PF12728 Helix-turn-helix domain E4625_06395 PF02634 FdhD/NarQ family E4625_06435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E4625_06435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E4625_06435 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E4625_06435 PF00384 Molybdopterin oxidoreductase E4625_06435 PF01568 Molydopterin dinucleotide binding domain E4625_06435 PF00384 Molybdopterin oxidoreductase E4625_06435 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E4625_06435 PF12838 4Fe-4S dicluster domain E4625_06435 PF01568 Molydopterin dinucleotide binding domain E4625_06435 PF12838 4Fe-4S dicluster domain E4625_06440 PF13247 4Fe-4S dicluster domain E4625_06450 PF00072 Response regulator receiver domain E4625_06455 PF03949 Malic enzyme, NAD binding domain E4625_06455 PF00390 Malic enzyme, N-terminal domain E4625_06460 PF05433 Glycine zipper 2TM domain E4625_06460 PF16998 17 kDa outer membrane surface antigen E4625_06470 PF00860 Permease family E4625_06475 PF10282 Lactonase, 7-bladed beta-propeller E4625_06485 PF12794 Mechanosensitive ion channel inner membrane domain 1 E4625_06485 PF12795 Mechanosensitive ion channel porin domain E4625_06485 PF00924 Mechanosensitive ion channel E4625_06490 PF02887 Pyruvate kinase, alpha/beta domain E4625_06490 PF00224 Pyruvate kinase, barrel domain E4625_06500 PF04151 Bacterial pre-peptidase C-terminal domain E4625_06500 PF04389 Peptidase family M28 E4625_06505 PF02254 TrkA-N domain E4625_06505 PF00999 Sodium/hydrogen exchanger family E4625_06515 PF04381 Putative exonuclease, RdgC E4625_06525 PF12320 Type 5 capsule protein repressor C-terminal domain E4625_06525 PF00149 Calcineurin-like phosphoesterase E4625_06535 PF01292 Prokaryotic cytochrome b561 E4625_06545 PF00072 Response regulator receiver domain E4625_06545 PF00990 Diguanylate cyclase, GGDEF domain E4625_06550 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E4625_06555 PF05524 PEP-utilising enzyme, N-terminal E4625_06555 PF00391 PEP-utilising enzyme, mobile domain E4625_06555 PF02896 PEP-utilising enzyme, TIM barrel domain E4625_06560 PF00381 PTS HPr component phosphorylation site E4625_06565 PF00291 Pyridoxal-phosphate dependent enzyme E4625_06570 PF17871 AAA lid domain E4625_06570 PF07724 AAA domain (Cdc48 subfamily) E4625_06570 PF00004 ATPase family associated with various cellular activities (AAA) E4625_06570 PF10431 C-terminal, D2-small domain, of ClpB protein E4625_06570 PF02861 Clp amino terminal domain, pathogenicity island component E4625_06580 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4625_06580 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E4625_06585 PF01966 HD domain E4625_06585 PF00672 HAMP domain E4625_06590 PF18389 TrmO C-terminal domain E4625_06590 PF01980 tRNA-methyltransferase O E4625_06610 PF00005 ABC transporter E4625_06610 PF00664 ABC transporter transmembrane region E4625_06615 PF00664 ABC transporter transmembrane region E4625_06615 PF00005 ABC transporter E4625_06630 PF00486 Transcriptional regulatory protein, C terminal E4625_06630 PF00072 Response regulator receiver domain E4625_06640 PF03737 Aldolase/RraA E4625_06655 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) E4625_06660 PF00588 SpoU rRNA Methylase family E4625_06670 PF00696 Amino acid kinase family E4625_06670 PF01842 ACT domain E4625_06670 PF13840 ACT domain E4625_06670 PF00742 Homoserine dehydrogenase E4625_06670 PF03447 Homoserine dehydrogenase, NAD binding domain E4625_06675 PF08544 GHMP kinases C terminal E4625_06675 PF00288 GHMP kinases N terminal domain E4625_06680 PF14821 Threonine synthase N terminus E4625_06680 PF00291 Pyridoxal-phosphate dependent enzyme E4625_06685 PF13474 SnoaL-like domain E4625_06700 PF00005 ABC transporter E4625_06700 PF12848 ABC transporter E4625_06715 PF01048 Phosphorylase superfamily E4625_06730 PF01627 Hpt domain E4625_06730 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4625_06730 PF00072 Response regulator receiver domain E4625_06730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_06730 PF00512 His Kinase A (phospho-acceptor) domain E4625_06730 PF00989 PAS fold E4625_06735 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E4625_06740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4625_06740 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E4625_06745 PF02690 Na+/Pi-cotransporter E4625_06755 PF13520 Amino acid permease E4625_06760 PF00324 Amino acid permease E4625_06765 PF00202 Aminotransferase class-III E4625_06770 PF00171 Aldehyde dehydrogenase family E4625_06775 PF01381 Helix-turn-helix E4625_06775 PF07883 Cupin domain E4625_06780 PF01266 FAD dependent oxidoreductase E4625_06795 PF05656 Protein of unknown function (DUF805) E4625_06810 PF00816 H-NS histone family E4625_06815 PF00793 DAHP synthetase I family E4625_06820 PF08021 Siderophore-interacting FAD-binding domain E4625_06820 PF04954 Siderophore-interacting protein E4625_06825 PF02321 Outer membrane efflux protein E4625_06830 PF02687 FtsX-like permease family E4625_06830 PF00005 ABC transporter E4625_06830 PF12704 MacB-like periplasmic core domain E4625_06835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4625_06845 PF01368 DHH family E4625_06845 PF02833 DHHA2 domain E4625_06850 PF02463 RecF/RecN/SMC N terminal domain E4625_06855 PF01513 ATP-NAD kinase E4625_06860 PF01025 GrpE E4625_06865 PF00012 Hsp70 protein E4625_06870 PF01556 DnaJ C terminal domain E4625_06870 PF00226 DnaJ domain E4625_06870 PF00684 DnaJ central domain E4625_06875 PF02264 LamB porin E4625_06875 PF11471 Maltoporin periplasmic N-terminal extension E4625_06880 PF00294 pfkB family carbohydrate kinase E4625_06885 PF00367 phosphotransferase system, EIIB E4625_06885 PF02378 Phosphotransferase system, EIIC E4625_06890 PF08244 Glycosyl hydrolases family 32 C terminal E4625_06890 PF00251 Glycosyl hydrolases family 32 N-terminal domain E4625_06895 PF13407 Periplasmic binding protein domain E4625_06895 PF00356 Bacterial regulatory proteins, lacI family E4625_06900 PF02308 MgtC family E4625_06915 PF01022 Bacterial regulatory protein, arsR family E4625_06920 PF04143 Sulphur transport E4625_06935 PF00873 AcrB/AcrD/AcrF family E4625_06940 PF00563 EAL domain E4625_06940 PF00990 Diguanylate cyclase, GGDEF domain E4625_06940 PF03707 Bacterial signalling protein N terminal repeat E4625_06945 PF03099 Biotin/lipoate A/B protein ligase family E4625_06945 PF10437 Bacterial lipoate protein ligase C-terminus E4625_06965 PF00873 AcrB/AcrD/AcrF family E4625_06970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4625_06970 PF00529 HlyD membrane-fusion protein of T1SS E4625_06980 PF00873 AcrB/AcrD/AcrF family E4625_06985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4625_06990 PF03372 Endonuclease/Exonuclease/phosphatase family E4625_07010 PF02424 ApbE family E4625_07015 PF00127 Copper binding proteins, plastocyanin/azurin family E4625_07030 PF01156 Inosine-uridine preferring nucleoside hydrolase E4625_07040 PF00034 Cytochrome c E4625_07040 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E4625_07050 PF00116 Cytochrome C oxidase subunit II, periplasmic domain E4625_07050 PF06481 COX Aromatic Rich Motif E4625_07055 PF00115 Cytochrome C and Quinol oxidase polypeptide I E4625_07060 PF00510 Cytochrome c oxidase subunit III E4625_07065 PF03626 Prokaryotic Cytochrome C oxidase subunit IV E4625_07070 PF01040 UbiA prenyltransferase family E4625_07075 PF07690 Major Facilitator Superfamily E4625_07085 PF00672 HAMP domain E4625_07085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_07085 PF00512 His Kinase A (phospho-acceptor) domain E4625_07085 PF01627 Hpt domain E4625_07085 PF00072 Response regulator receiver domain E4625_07090 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E4625_07100 PF00486 Transcriptional regulatory protein, C terminal E4625_07100 PF00072 Response regulator receiver domain E4625_07105 PF03264 NapC/NirT cytochrome c family, N-terminal region E4625_07110 PF18364 Molybdopterin oxidoreductase N-terminal domain E4625_07110 PF01568 Molydopterin dinucleotide binding domain E4625_07110 PF00384 Molybdopterin oxidoreductase E4625_07115 PF02613 Nitrate reductase delta subunit E4625_07155 PF04002 RadC-like JAB domain E4625_07195 PF03466 LysR substrate binding domain E4625_07195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_07210 PF00696 Amino acid kinase family E4625_07215 PF06545 Protein of unknown function (DUF1116) E4625_07220 PF00549 CoA-ligase E4625_07220 PF02629 CoA binding domain E4625_07225 PF00857 Isochorismatase family E4625_07240 PF05930 Prophage CP4-57 regulatory protein (AlpA) E4625_07265 PF01773 Na+ dependent nucleoside transporter N-terminus E4625_07265 PF07662 Na+ dependent nucleoside transporter C-terminus E4625_07265 PF07670 Nucleoside recognition E4625_07295 PF00696 Amino acid kinase family E4625_07305 PF06545 Protein of unknown function (DUF1116) E4625_07310 PF00549 CoA-ligase E4625_07310 PF02629 CoA binding domain E4625_07315 PF11392 Protein of unknown function (DUF2877) E4625_07320 PF12796 Ankyrin repeats (3 copies) E4625_07325 PF03466 LysR substrate binding domain E4625_07325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_07345 PF00665 Integrase core domain E4625_07345 PF02796 Helix-turn-helix domain of resolvase E4625_07365 PF00576 HIUase/Transthyretin family E4625_07375 PF00072 Response regulator receiver domain E4625_07375 PF00486 Transcriptional regulatory protein, C terminal E4625_07380 PF00672 HAMP domain E4625_07380 PF00512 His Kinase A (phospho-acceptor) domain E4625_07380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_07390 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E4625_07390 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E4625_07395 PF06276 Ferric iron reductase FhuF-like transporter E4625_07395 PF04183 IucA / IucC family E4625_07405 PF06276 Ferric iron reductase FhuF-like transporter E4625_07405 PF04183 IucA / IucC family E4625_07410 PF00206 Lyase E4625_07410 PF02655 ATP-grasp domain E4625_07415 PF00593 TonB dependent receptor E4625_07415 PF07715 TonB-dependent Receptor Plug Domain E4625_07420 PF07660 Secretin and TonB N terminus short domain E4625_07420 PF07715 TonB-dependent Receptor Plug Domain E4625_07420 PF00593 TonB dependent receptor E4625_07425 PF01497 Periplasmic binding protein E4625_07430 PF01032 FecCD transport family E4625_07435 PF01032 FecCD transport family E4625_07440 PF00005 ABC transporter E4625_07450 PF13737 Transposase DDE domain E4625_07485 PF01312 FlhB HrpN YscU SpaS Family E4625_07490 PF01311 Bacterial export proteins, family 1 E4625_07495 PF01313 Bacterial export proteins, family 3 E4625_07500 PF00813 FliP family E4625_07505 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4625_07525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4625_07525 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4625_07525 PF18269 T3SS EscN ATPase C-terminal domain E4625_07530 PF07201 HrpJ-like domain E4625_07535 PF09059 TyeA E4625_07545 PF09474 Type III secretion system YscX (type_III_YscX) E4625_07555 PF00771 FHIPEP family E4625_07560 PF09621 Type III secretion system regulator (LcrR) E4625_07565 PF07216 LcrG protein E4625_07570 PF04792 V antigen (LcrV) protein E4625_07575 PF07720 Tetratricopeptide repeat E4625_07580 PF04888 Secretion system effector C (SseC) like family E4625_07585 PF05844 YopD protein E4625_07590 PF05932 Tir chaperone protein (CesT) family E4625_07605 PF12833 Helix-turn-helix domain E4625_07625 PF16697 Inner membrane component of T3SS, cytoplasmic domain E4625_07625 PF16693 Inner membrane component of T3SS, periplasmic domain E4625_07635 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF E4625_07640 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) E4625_07645 PF09025 YopR, type III needle-polymerisation regulator E4625_07650 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI E4625_07655 PF01514 Secretory protein of YscJ/FliF family E4625_07660 PF06578 YOP proteins translocation protein K (YscK) E4625_07665 PF02108 Flagellar assembly protein FliH E4625_07695 PF05717 IS66 Orf2 like protein E4625_07705 PF00290 Tryptophan synthase alpha chain E4625_07710 PF00291 Pyridoxal-phosphate dependent enzyme E4625_07715 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase E4625_07715 PF00218 Indole-3-glycerol phosphate synthase E4625_07720 PF02885 Glycosyl transferase family, helical bundle domain E4625_07720 PF00591 Glycosyl transferase family, a/b domain E4625_07725 PF00117 Glutamine amidotransferase class-I E4625_07725 PF00591 Glycosyl transferase family, a/b domain E4625_07725 PF02885 Glycosyl transferase family, helical bundle domain E4625_07730 PF04715 Anthranilate synthase component I, N terminal region E4625_07730 PF00425 chorismate binding enzyme E4625_07735 PF02811 PHP domain E4625_07740 PF01300 Telomere recombination E4625_07745 PF02616 Segregation and condensation protein ScpA E4625_07750 PF04079 Segregation and condensation complex subunit ScpB E4625_07755 PF00849 RNA pseudouridylate synthase E4625_07755 PF01479 S4 domain E4625_07775 PF00440 Bacterial regulatory proteins, tetR family E4625_07775 PF08361 MAATS-type transcriptional repressor, C-terminal region E4625_07780 PF00529 HlyD membrane-fusion protein of T1SS E4625_07780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4625_07785 PF00873 AcrB/AcrD/AcrF family E4625_07790 PF02321 Outer membrane efflux protein E4625_07795 PF16363 GDP-mannose 4,6 dehydratase E4625_07800 PF04321 RmlD substrate binding domain E4625_07805 PF00483 Nucleotidyl transferase E4625_07810 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase E4625_07815 PF00535 Glycosyl transferase family 2 E4625_07825 PF00005 ABC transporter E4625_07830 PF14307 Glycosyltransferase WbsX E4625_07830 PF05045 Rhamnan synthesis protein F E4625_07835 PF00535 Glycosyl transferase family 2 E4625_07840 PF01370 NAD dependent epimerase/dehydratase family E4625_07845 PF01507 Phosphoadenosine phosphosulfate reductase family E4625_07850 PF00009 Elongation factor Tu GTP binding domain E4625_07855 PF03600 Citrate transporter E4625_07855 PF02080 TrkA-C domain E4625_07870 PF01370 NAD dependent epimerase/dehydratase family E4625_07875 PF00953 Glycosyl transferase family 4 E4625_07880 PF02719 Polysaccharide biosynthesis protein E4625_07885 PF00953 Glycosyl transferase family 4 E4625_07890 PF13737 Transposase DDE domain E4625_07905 PF00534 Glycosyl transferases group 1 E4625_07905 PF13439 Glycosyltransferase Family 4 E4625_07915 PF00534 Glycosyl transferases group 1 E4625_07920 PF01370 NAD dependent epimerase/dehydratase family E4625_07925 PF01050 Mannose-6-phosphate isomerase E4625_07925 PF00483 Nucleotidyl transferase E4625_07930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4625_07930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4625_07930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4625_07930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4625_07935 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E4625_07935 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E4625_07935 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E4625_07940 PF10531 SLBB domain E4625_07940 PF02563 Polysaccharide biosynthesis/export protein E4625_07940 PF18412 Outer-membrane lipoprotein Wza C-terminal domain E4625_07945 PF01451 Low molecular weight phosphotyrosine protein phosphatase E4625_07950 PF13807 G-rich domain on putative tyrosine kinase E4625_07950 PF13614 AAA domain E4625_07950 PF02706 Chain length determinant protein E4625_07960 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF E4625_07965 PF06251 Capsule biosynthesis GfcC E4625_07970 PF06082 Exopolysaccharide biosynthesis protein YbjH E4625_07980 PF04337 Protein of unknown function, DUF480 E4625_07985 PF00271 Helicase conserved C-terminal domain E4625_07985 PF00176 SNF2 family N-terminal domain E4625_07985 PF04434 SWIM zinc finger E4625_07990 PF05472 DNA replication terminus site-binding protein (Ter protein) E4625_08000 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family E4625_08005 PF00676 Dehydrogenase E1 component E4625_08010 PF02780 Transketolase, C-terminal domain E4625_08010 PF02779 Transketolase, pyrimidine binding domain E4625_08015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E4625_08015 PF00364 Biotin-requiring enzyme E4625_08015 PF02817 e3 binding domain E4625_08020 PF00313 'Cold-shock' DNA-binding domain E4625_08045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4625_08050 PF00892 EamA-like transporter family E4625_08055 PF00455 DeoR C terminal sensor domain E4625_08055 PF08220 DeoR-like helix-turn-helix domain E4625_08065 PF04055 Radical SAM superfamily E4625_08070 PF00923 Transaldolase/Fructose-6-phosphate aldolase E4625_08080 PF11871 Domain of unknown function (DUF3391) E4625_08080 PF01966 HD domain E4625_08085 PF00849 RNA pseudouridylate synthase E4625_08085 PF01479 S4 domain E4625_08095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4625_08100 PF12850 Calcineurin-like phosphoesterase superfamily domain E4625_08115 PF13144 Chaperone for flagella basal body P-ring formation E4625_08120 PF00072 Response regulator receiver domain E4625_08120 PF01584 CheW-like domain E4625_08125 PF03705 CheR methyltransferase, all-alpha domain E4625_08125 PF01739 CheR methyltransferase, SAM binding domain E4625_08130 PF00460 Flagella basal body rod protein E4625_08135 PF00460 Flagella basal body rod protein E4625_08135 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4625_08145 PF00460 Flagella basal body rod protein E4625_08145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4625_08145 PF07559 Flagellar basal body protein FlaE E4625_08150 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4625_08150 PF00460 Flagella basal body rod protein E4625_08155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4625_08155 PF00460 Flagella basal body rod protein E4625_08160 PF02107 Flagellar L-ring protein E4625_08165 PF02119 Flagellar P-ring protein E4625_08170 PF10135 Rod binding protein E4625_08170 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E4625_08185 PF03448 MgtE intracellular N domain E4625_08185 PF00571 CBS domain E4625_08185 PF01769 Divalent cation transporter E4625_08190 PF02541 Ppx/GppA phosphatase family E4625_08195 PF17941 Polyphosphate kinase C-terminal domain 1 E4625_08195 PF13090 Polyphosphate kinase C-terminal domain 2 E4625_08195 PF13089 Polyphosphate kinase N-terminal domain E4625_08195 PF02503 Polyphosphate kinase middle domain E4625_08200 PF01842 ACT domain E4625_08210 PF02954 Bacterial regulatory protein, Fis family E4625_08210 PF00072 Response regulator receiver domain E4625_08210 PF00158 Sigma-54 interaction domain E4625_08215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_08215 PF00512 His Kinase A (phospho-acceptor) domain E4625_08215 PF00989 PAS fold E4625_08220 PF02954 Bacterial regulatory protein, Fis family E4625_08220 PF00158 Sigma-54 interaction domain E4625_08225 PF01784 NIF3 (NGG1p interacting factor 3) E4625_08230 PF00551 Formyl transferase E4625_08235 PF02769 AIR synthase related protein, C-terminal domain E4625_08235 PF00586 AIR synthase related protein, N-terminal domain E4625_08250 PF00308 Bacterial dnaA protein E4625_08255 PF00463 Isocitrate lyase family E4625_08260 PF01274 Malate synthase E4625_08270 PF14437 MafB19-like deaminase E4625_08275 PF00528 Binding-protein-dependent transport system inner membrane component E4625_08280 PF00528 Binding-protein-dependent transport system inner membrane component E4625_08290 PF01895 PhoU domain E4625_08295 PF01595 Cyclin M transmembrane N-terminal domain E4625_08295 PF03471 Transporter associated domain E4625_08295 PF00571 CBS domain E4625_08305 PF00809 Pterin binding enzyme E4625_08305 PF02310 B12 binding domain E4625_08305 PF02607 B12 binding domain E4625_08305 PF02574 Homocysteine S-methyltransferase E4625_08305 PF02965 Vitamin B12 dependent methionine synthase, activation domain E4625_08310 PF13520 Amino acid permease E4625_08315 PF04116 Fatty acid hydroxylase superfamily E4625_08325 PF00005 ABC transporter E4625_08330 PF00528 Binding-protein-dependent transport system inner membrane component E4625_08335 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4625_08340 PF00990 Diguanylate cyclase, GGDEF domain E4625_08340 PF08448 PAS fold E4625_08345 PF07690 Major Facilitator Superfamily E4625_08350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_08350 PF05231 MASE1 E4625_08350 PF07730 Histidine kinase E4625_08355 PF00196 Bacterial regulatory proteins, luxR family E4625_08355 PF00072 Response regulator receiver domain E4625_08360 PF14760 Rnk N-terminus E4625_08360 PF01272 Transcription elongation factor, GreA/GreB, C-term E4625_08375 PF00245 Alkaline phosphatase E4625_08380 PF00245 Alkaline phosphatase E4625_08385 PF01926 50S ribosome-binding GTPase E4625_08390 PF07690 Major Facilitator Superfamily E4625_08395 PF00850 Histone deacetylase domain E4625_08405 PF13307 Helicase C-terminal domain E4625_08405 PF06733 DEAD_2 E4625_08410 PF13609 Gram-negative porin E4625_08420 PF00155 Aminotransferase class I and II E4625_08425 PF05872 Bacterial protein of unknown function (DUF853) E4625_08440 PF00753 Metallo-beta-lactamase superfamily E4625_08440 PF03772 Competence protein E4625_08445 PF00664 ABC transporter transmembrane region E4625_08445 PF00005 ABC transporter E4625_08450 PF02606 Tetraacyldisaccharide-1-P 4'-kinase E4625_08455 PF03966 Trm112p-like protein E4625_08460 PF02348 Cytidylyltransferase E4625_08465 PF00072 Response regulator receiver domain E4625_08465 PF00196 Bacterial regulatory proteins, luxR family E4625_08470 PF02151 UvrB/uvrC motif E4625_08470 PF01541 GIY-YIG catalytic domain E4625_08470 PF08459 UvrC Helix-hairpin-helix N-terminal E4625_08475 PF01066 CDP-alcohol phosphatidyltransferase E4625_08495 PF14659 Phage integrase, N-terminal SAM-like domain E4625_08495 PF00589 Phage integrase family E4625_08545 PF13426 PAS domain E4625_08545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_08545 PF08447 PAS fold E4625_08555 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB E4625_08560 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) E4625_08580 PF13247 4Fe-4S dicluster domain E4625_08580 PF00037 4Fe-4S binding domain E4625_08585 PF03916 Polysulphide reductase, NrfD E4625_08590 PF00149 Calcineurin-like phosphoesterase E4625_08600 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E4625_08605 PF09190 DALR domain E4625_08605 PF01406 tRNA synthetases class I (C) catalytic domain E4625_08610 PF02463 RecF/RecN/SMC N terminal domain E4625_08610 PF06470 SMC proteins Flexible Hinge Domain E4625_08620 PF00990 Diguanylate cyclase, GGDEF domain E4625_08620 PF13185 GAF domain E4625_08650 PF01169 Uncharacterized protein family UPF0016 E4625_08655 PF01253 Translation initiation factor SUI1 E4625_08665 PF02421 Ferrous iron transport protein B E4625_08665 PF07664 Ferrous iron transport protein B C terminus E4625_08665 PF07670 Nucleoside recognition E4625_08680 PF00483 Nucleotidyl transferase E4625_08685 PF00437 Type II/IV secretion system protein E4625_08695 PF00989 PAS fold E4625_08695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_08695 PF00512 His Kinase A (phospho-acceptor) domain E4625_08695 PF01627 Hpt domain E4625_08695 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4625_08695 PF00072 Response regulator receiver domain E4625_08700 PF01032 FecCD transport family E4625_08705 PF00005 ABC transporter E4625_08710 PF00583 Acetyltransferase (GNAT) family E4625_08715 PF00793 DAHP synthetase I family E4625_08720 PF01219 Prokaryotic diacylglycerol kinase E4625_08725 PF01842 ACT domain E4625_08725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4625_08725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4625_08730 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) E4625_08735 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) E4625_08740 PF01812 5-formyltetrahydrofolate cyclo-ligase family E4625_08750 PF01113 Dihydrodipicolinate reductase, N-terminus E4625_08750 PF05173 Dihydrodipicolinate reductase, C-terminus E4625_08755 PF00117 Glutamine amidotransferase class-I E4625_08755 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain E4625_08760 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain E4625_08760 PF02142 MGS-like domain E4625_08760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E4625_08765 PF08502 LeuA allosteric (dimerisation) domain E4625_08765 PF00682 HMGL-like E4625_08770 PF07759 Protein of unknown function (DUF1615) E4625_08775 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E4625_08795 PF13302 Acetyltransferase (GNAT) domain E4625_08800 PF00270 DEAD/DEAH box helicase E4625_08800 PF00271 Helicase conserved C-terminal domain E4625_08810 PF14521 Lysine-specific metallo-endopeptidase E4625_08825 PF09278 MerR, DNA binding E4625_08825 PF00376 MerR family regulatory protein E4625_08840 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4625_08845 PF00528 Binding-protein-dependent transport system inner membrane component E4625_08855 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4625_08855 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4625_08860 PF04898 Glutamate synthase central domain E4625_08860 PF01645 Conserved region in glutamate synthase E4625_08860 PF00310 Glutamine amidotransferases class-II E4625_08860 PF01493 GXGXG motif E4625_08865 PF16199 Radical_SAM C-terminal domain E4625_08865 PF04055 Radical SAM superfamily E4625_08870 PF00664 ABC transporter transmembrane region E4625_08870 PF00005 ABC transporter E4625_08870 PF03412 Peptidase C39 family E4625_08910 PF00324 Amino acid permease E4625_08920 PF03618 Kinase/pyrophosphorylase E4625_08925 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E4625_08925 PF00391 PEP-utilising enzyme, mobile domain E4625_08925 PF02896 PEP-utilising enzyme, TIM barrel domain E4625_08935 PF00933 Glycosyl hydrolase family 3 N terminal domain E4625_08935 PF01915 Glycosyl hydrolase family 3 C-terminal domain E4625_08935 PF14310 Fibronectin type III-like domain E4625_08945 PF01483 Proprotein convertase P-domain E4625_08945 PF00082 Subtilase family E4625_08955 PF03180 NLPA lipoprotein E4625_08960 PF01569 PAP2 superfamily E4625_08965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4625_08965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4625_08965 PF11890 Domain of unknown function (DUF3410) E4625_08970 PF02774 Semialdehyde dehydrogenase, dimerisation domain E4625_08970 PF01118 Semialdehyde dehydrogenase, NAD binding domain E4625_08980 PF01416 tRNA pseudouridine synthase E4625_08985 PF17848 Acetyl-coA carboxylase zinc finger domain E4625_08985 PF01039 Carboxyl transferase domain E4625_08990 PF02875 Mur ligase family, glutamate ligase domain E4625_08990 PF08245 Mur ligase middle domain E4625_08995 PF05036 Sporulation related domain E4625_09000 PF04358 DsrC like protein E4625_09005 PF12805 FUSC-like inner membrane protein yccS E4625_09010 PF01027 Inhibitor of apoptosis-promoting Bax1 E4625_09030 PF00884 Sulfatase E4625_09030 PF08019 Phosphoethanolamine transferase EptA/EptB E4625_09040 PF03706 Lysylphosphatidylglycerol synthase TM region E4625_09040 PF09924 Uncharacterised conserved protein (DUF2156) E4625_09050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_09050 PF08447 PAS fold E4625_09055 PF00563 EAL domain E4625_09055 PF00990 Diguanylate cyclase, GGDEF domain E4625_09055 PF13426 PAS domain E4625_09060 PF00849 RNA pseudouridylate synthase E4625_09070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4625_09075 PF04209 homogentisate 1,2-dioxygenase E4625_09085 PF14497 Glutathione S-transferase, C-terminal domain E4625_09085 PF02798 Glutathione S-transferase, N-terminal domain E4625_09090 PF13417 Glutathione S-transferase, N-terminal domain E4625_09090 PF00043 Glutathione S-transferase, C-terminal domain E4625_09100 PF13537 Glutamine amidotransferase domain E4625_09100 PF00733 Asparagine synthase E4625_09110 PF02254 TrkA-N domain E4625_09110 PF00999 Sodium/hydrogen exchanger family E4625_09115 PF13344 Haloacid dehalogenase-like hydrolase E4625_09120 PF00962 Adenosine/AMP deaminase E4625_09125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4625_09130 PF03471 Transporter associated domain E4625_09130 PF03741 Integral membrane protein TerC family E4625_09140 PF13183 4Fe-4S dicluster domain E4625_09140 PF01565 FAD binding domain E4625_09140 PF02913 FAD linked oxidases, C-terminal domain E4625_09150 PF03061 Thioesterase superfamily E4625_09155 PF00271 Helicase conserved C-terminal domain E4625_09155 PF03880 DbpA RNA binding domain E4625_09155 PF00270 DEAD/DEAH box helicase E4625_09160 PF13726 Na+-H+ antiporter family E4625_09160 PF03553 Na+/H+ antiporter family E4625_09165 PF00929 Exonuclease E4625_09170 PF00672 HAMP domain E4625_09170 PF12729 Four helix bundle sensory module for signal transduction E4625_09170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_09175 PF00691 OmpA family E4625_09175 PF18393 MotY N-terminal domain E4625_09180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4625_09185 PF00730 HhH-GPD superfamily base excision DNA repair protein E4625_09185 PF10576 Iron-sulfur binding domain of endonuclease III E4625_09185 PF00633 Helix-hairpin-helix motif E4625_09190 PF02508 Rnf-Nqr subunit, membrane protein E4625_09195 PF04205 FMN-binding domain E4625_09200 PF03116 NQR2, RnfD, RnfE family E4625_09205 PF13375 RnfC Barrel sandwich hybrid domain E4625_09205 PF12838 4Fe-4S dicluster domain E4625_09205 PF10531 SLBB domain E4625_09205 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4625_09210 PF04060 Putative Fe-S cluster E4625_09215 PF02508 Rnf-Nqr subunit, membrane protein E4625_09220 PF00892 EamA-like transporter family E4625_09230 PF13426 PAS domain E4625_09230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_09230 PF08447 PAS fold E4625_09240 PF07055 Enoyl reductase FAD binding domain E4625_09240 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase E4625_09240 PF12241 Trans-2-enoyl-CoA reductase catalytic region E4625_09245 PF03606 C4-dicarboxylate anaerobic carrier E4625_09250 PF07411 Domain of unknown function (DUF1508) E4625_09255 PF00816 H-NS histone family E4625_09325 PF02899 Phage integrase, N-terminal SAM-like domain E4625_09325 PF00589 Phage integrase family E4625_09330 PF00155 Aminotransferase class I and II E4625_09340 PF00462 Glutaredoxin E4625_09345 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family E4625_09350 PF00271 Helicase conserved C-terminal domain E4625_09350 PF04851 Type III restriction enzyme, res subunit E4625_09355 PF00529 HlyD membrane-fusion protein of T1SS E4625_09355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4625_09360 PF11742 Protein of unknown function (DUF3302) E4625_09365 PF02554 Carbon starvation protein CstA E4625_09370 PF00072 Response regulator receiver domain E4625_09370 PF04397 LytTr DNA-binding domain E4625_09375 PF06580 Histidine kinase E4625_09375 PF07694 5TMR of 5TMR-LYT E4625_09380 PF01966 HD domain E4625_09385 PF00465 Iron-containing alcohol dehydrogenase E4625_09385 PF00171 Aldehyde dehydrogenase family E4625_09395 PF01914 MarC family integral membrane protein E4625_09400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4625_09405 PF00528 Binding-protein-dependent transport system inner membrane component E4625_09410 PF12911 N-terminal TM domain of oligopeptide transport permease C E4625_09410 PF00528 Binding-protein-dependent transport system inner membrane component E4625_09415 PF00005 ABC transporter E4625_09415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4625_09425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4625_09425 PF00005 ABC transporter E4625_09430 PF03741 Integral membrane protein TerC family E4625_09435 PF01168 Alanine racemase, N-terminal domain E4625_09435 PF00842 Alanine racemase, C-terminal domain E4625_09445 PF00375 Sodium:dicarboxylate symporter family E4625_09465 PF01979 Amidohydrolase family E4625_09475 PF00672 HAMP domain E4625_09475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_09480 PF01230 HIT domain E4625_09515 PF07549 SecD/SecF GG Motif E4625_09515 PF13721 SecD export protein N-terminal TM region E4625_09515 PF02355 Protein export membrane protein E4625_09520 PF02355 Protein export membrane protein E4625_09520 PF07549 SecD/SecF GG Motif E4625_09530 PF05661 Protein of unknown function (DUF808) E4625_09535 PF01432 Peptidase family M3 E4625_09535 PF08439 Oligopeptidase F E4625_09540 PF01432 Peptidase family M3 E4625_09540 PF08439 Oligopeptidase F E4625_09545 PF00860 Permease family E4625_09550 PF05728 Uncharacterised protein family (UPF0227) E4625_09555 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4625_09575 PF01906 Putative heavy-metal-binding E4625_09585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4625_09585 PF14824 Sirohaem biosynthesis protein central E4625_09585 PF10414 Sirohaem synthase dimerisation region E4625_09590 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E4625_09590 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E4625_09590 PF13187 4Fe-4S dicluster domain E4625_09595 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B E4625_09595 PF00175 Oxidoreductase NAD-binding domain E4625_09600 PF17179 4Fe-4S dicluster domain E4625_09605 PF01734 Patatin-like phospholipase E4625_09610 PF02016 LD-carboxypeptidase N-terminal domain E4625_09610 PF17676 LD-carboxypeptidase C-terminal domain E4625_09615 PF00884 Sulfatase E4625_09625 PF01842 ACT domain E4625_09625 PF00696 Amino acid kinase family E4625_09630 PF00583 Acetyltransferase (GNAT) family E4625_09630 PF00696 Amino acid kinase family E4625_09635 PF01625 Peptide methionine sulfoxide reductase E4625_09790 PF00816 H-NS histone family E4625_09805 PF00561 alpha/beta hydrolase fold E4625_09810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4625_09820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_09820 PF03466 LysR substrate binding domain E4625_09825 PF02652 L-lactate permease E4625_09830 PF02754 Cysteine-rich domain E4625_09835 PF02589 LUD domain E4625_09835 PF13183 4Fe-4S dicluster domain E4625_09835 PF11870 Domain of unknown function (DUF3390) E4625_09840 PF02589 LUD domain E4625_09845 PF01565 FAD binding domain E4625_09845 PF02913 FAD linked oxidases, C-terminal domain E4625_09880 PF00005 ABC transporter E4625_09890 PF07690 Major Facilitator Superfamily E4625_09905 PF01593 Flavin containing amine oxidoreductase E4625_09910 PF03239 Iron permease FTR1 family E4625_09925 PF03350 Uncharacterized protein family, UPF0114 E4625_09940 PF01740 STAS domain E4625_09940 PF00916 Sulfate permease family E4625_09965 PF01168 Alanine racemase, N-terminal domain E4625_09965 PF00842 Alanine racemase, C-terminal domain E4625_09970 PF12729 Four helix bundle sensory module for signal transduction E4625_09970 PF00672 HAMP domain E4625_09970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_09975 PF03707 Bacterial signalling protein N terminal repeat E4625_09975 PF00990 Diguanylate cyclase, GGDEF domain E4625_09975 PF00563 EAL domain E4625_09980 PF01339 CheB methylesterase E4625_09980 PF00072 Response regulator receiver domain E4625_09985 PF03705 CheR methyltransferase, all-alpha domain E4625_09985 PF01739 CheR methyltransferase, SAM binding domain E4625_09990 PF01584 CheW-like domain E4625_09995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_09995 PF00672 HAMP domain E4625_09995 PF17202 Single cache domain 3 E4625_10000 PF09078 CheY binding E4625_10000 PF02895 Signal transducing histidine kinase, homodimeric domain E4625_10000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_10000 PF01584 CheW-like domain E4625_10000 PF01627 Hpt domain E4625_10010 PF00072 Response regulator receiver domain E4625_10015 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E4625_10015 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal E4625_10020 PF13247 4Fe-4S dicluster domain E4625_10025 PF03916 Polysulphide reductase, NrfD E4625_10030 PF00374 Nickel-dependent hydrogenase E4625_10035 PF01750 Hydrogenase maturation protease E4625_10040 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE E4625_10045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4625_10050 PF00528 Binding-protein-dependent transport system inner membrane component E4625_10055 PF12911 N-terminal TM domain of oligopeptide transport permease C E4625_10055 PF00528 Binding-protein-dependent transport system inner membrane component E4625_10060 PF00005 ABC transporter E4625_10065 PF00005 ABC transporter E4625_10065 PF08402 TOBE domain E4625_10070 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4625_10075 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA E4625_10080 PF02769 AIR synthase related protein, C-terminal domain E4625_10080 PF00586 AIR synthase related protein, N-terminal domain E4625_10085 PF01924 Hydrogenase formation hypA family E4625_10090 PF01455 HupF/HypC family E4625_10095 PF00708 Acylphosphatase E4625_10095 PF01300 Telomere recombination E4625_10095 PF07503 HypF finger E4625_10095 PF17788 HypF Kae1-like domain E4625_10100 PF03144 Elongation factor Tu domain 2 E4625_10100 PF09107 Elongation factor SelB, winged helix E4625_10100 PF09106 Elongation factor SelB, winged helix E4625_10100 PF09105 Elongation factor SelB, winged helix E4625_10100 PF00009 Elongation factor Tu GTP binding domain E4625_10105 PF12390 Selenocysteine synthase N terminal E4625_10105 PF03841 L-seryl-tRNA selenium transferase E4625_10110 PF01750 Hydrogenase maturation protease E4625_10115 PF07450 Formate hydrogenlyase maturation protein HycH E4625_10120 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E4625_10125 PF12838 4Fe-4S dicluster domain E4625_10130 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit E4625_10130 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit E4625_10130 PF00374 Nickel-dependent hydrogenase E4625_10135 PF00146 NADH dehydrogenase E4625_10140 PF00361 Proton-conducting membrane transporter E4625_10145 PF00037 4Fe-4S binding domain E4625_10145 PF12798 4Fe-4S binding domain E4625_10150 PF02705 K+ potassium transporter E4625_10160 PF12800 4Fe-4S binding domain E4625_10160 PF13247 4Fe-4S dicluster domain E4625_10175 PF01590 GAF domain E4625_10175 PF00158 Sigma-54 interaction domain E4625_10175 PF02954 Bacterial regulatory protein, Fis family E4625_10180 PF02634 FdhD/NarQ family E4625_10185 PF13662 Toprim domain E4625_10185 PF02132 RecR protein E4625_10195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_10195 PF00183 Hsp90 protein E4625_10205 PF05191 Adenylate kinase, active site lid E4625_10210 PF00762 Ferrochelatase E4625_10220 PF00294 pfkB family carbohydrate kinase E4625_10235 PF03707 Bacterial signalling protein N terminal repeat E4625_10235 PF00990 Diguanylate cyclase, GGDEF domain E4625_10235 PF00563 EAL domain E4625_10240 PF00483 Nucleotidyl transferase E4625_10250 PF07273 Protein of unknown function (DUF1439) E4625_10255 PF00425 chorismate binding enzyme E4625_10260 PF13193 AMP-binding enzyme C-terminal domain E4625_10260 PF00501 AMP-binding enzyme E4625_10265 PF00550 Phosphopantetheine attachment site E4625_10265 PF00857 Isochorismatase family E4625_10270 PF00501 AMP-binding enzyme E4625_10270 PF00550 Phosphopantetheine attachment site E4625_10270 PF00975 Thioesterase domain E4625_10270 PF13193 AMP-binding enzyme C-terminal domain E4625_10270 PF00668 Condensation domain E4625_10280 PF00550 Phosphopantetheine attachment site E4625_10280 PF07993 Male sterility protein E4625_10280 PF00668 Condensation domain E4625_10280 PF13193 AMP-binding enzyme C-terminal domain E4625_10280 PF00501 AMP-binding enzyme E4625_10285 PF13193 AMP-binding enzyme C-terminal domain E4625_10285 PF00668 Condensation domain E4625_10285 PF00501 AMP-binding enzyme E4625_10285 PF00550 Phosphopantetheine attachment site E4625_10285 PF00975 Thioesterase domain E4625_10290 PF00768 D-alanyl-D-alanine carboxypeptidase E4625_10295 PF00293 NUDIX domain E4625_10300 PF03918 Cytochrome C biogenesis protein E4625_10305 PF08534 Redoxin E4625_10310 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal E4625_10310 PF01578 Cytochrome C assembly protein E4625_10315 PF03916 Polysulphide reductase, NrfD E4625_10320 PF13247 4Fe-4S dicluster domain E4625_10320 PF00037 4Fe-4S binding domain E4625_10325 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) E4625_10325 PF13435 Cytochrome c554 and c-prime E4625_10330 PF02335 Cytochrome c552 E4625_10340 PF13183 4Fe-4S dicluster domain E4625_10340 PF02754 Cysteine-rich domain E4625_10345 PF00890 FAD binding domain E4625_10350 PF01266 FAD dependent oxidoreductase E4625_10350 PF04324 BFD-like [2Fe-2S] binding domain E4625_10355 PF02810 SEC-C motif E4625_10360 PF17200 Single Cache domain 2 E4625_10360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_10360 PF00672 HAMP domain E4625_10365 PF01047 MarR family E4625_10365 PF00480 ROK family E4625_10370 PF17203 Single cache domain 3 E4625_10370 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain E4625_10370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_10370 PF00989 PAS fold E4625_10375 PF12431 Transcriptional regulator E4625_10375 PF08279 HTH domain E4625_10375 PF00072 Response regulator receiver domain E4625_10380 PF01970 Tripartite tricarboxylate transporter TctA family E4625_10395 PF01464 Transglycosylase SLT domain E4625_10395 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4625_10400 PF06826 Predicted Permease Membrane Region E4625_10400 PF02080 TrkA-C domain E4625_10415 PF04851 Type III restriction enzyme, res subunit E4625_10415 PF02151 UvrB/uvrC motif E4625_10415 PF12344 Ultra-violet resistance protein B E4625_10415 PF17757 UvrB interaction domain E4625_10415 PF00271 Helicase conserved C-terminal domain E4625_10425 PF09335 SNARE associated Golgi protein E4625_10430 PF02600 Disulfide bond formation protein DsbB E4625_10435 PF06450 Bacterial Na+/H+ antiporter B (NhaB) E4625_10440 PF00392 Bacterial regulatory proteins, gntR family E4625_10440 PF07840 FadR C-terminal domain E4625_10445 PF04293 SpoVR like protein E4625_10450 PF04285 Protein of unknown function (DUF444) E4625_10455 PF06798 PrkA serine protein kinase C-terminal domain E4625_10455 PF08298 PrkA AAA domain E4625_10460 PF00570 HRDC domain E4625_10460 PF00271 Helicase conserved C-terminal domain E4625_10460 PF09382 RQC domain E4625_10460 PF16124 RecQ zinc-binding E4625_10460 PF00270 DEAD/DEAH box helicase E4625_10465 PF00375 Sodium:dicarboxylate symporter family E4625_10470 PF03222 Tryptophan/tyrosine permease family E4625_10475 PF00293 NUDIX domain E4625_10480 PF00425 chorismate binding enzyme E4625_10480 PF04715 Anthranilate synthase component I, N terminal region E4625_10505 PF00343 Carbohydrate phosphorylase E4625_10510 PF00939 Sodium:sulfate symporter transmembrane region E4625_10515 PF00085 Thioredoxin E4625_10520 PF00672 HAMP domain E4625_10520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_10520 PF00512 His Kinase A (phospho-acceptor) domain E4625_10520 PF01627 Hpt domain E4625_10520 PF00072 Response regulator receiver domain E4625_10520 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E4625_10525 PF00005 ABC transporter E4625_10525 PF00664 ABC transporter transmembrane region E4625_10535 PF00664 ABC transporter transmembrane region E4625_10535 PF00005 ABC transporter E4625_10555 PF01575 MaoC like domain E4625_10560 PF00561 alpha/beta hydrolase fold E4625_10560 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus E4625_10585 PF08543 Phosphomethylpyrimidine kinase E4625_10590 PF03992 Antibiotic biosynthesis monooxygenase E4625_10595 PF00465 Iron-containing alcohol dehydrogenase E4625_10600 PF00583 Acetyltransferase (GNAT) family E4625_10610 PF01928 CYTH domain E4625_10625 PF13673 Acetyltransferase (GNAT) domain E4625_10630 PF00271 Helicase conserved C-terminal domain E4625_10630 PF00270 DEAD/DEAH box helicase E4625_10635 PF00255 Glutathione peroxidase E4625_10650 PF01820 D-ala D-ala ligase N-terminus E4625_10650 PF07478 D-ala D-ala ligase C-terminus E4625_10655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4625_10655 PF18029 Glyoxalase-like domain E4625_10665 PF01925 Sulfite exporter TauE/SafE E4625_10670 PF03466 LysR substrate binding domain E4625_10670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_10680 PF14525 AraC-binding-like domain E4625_10680 PF12833 Helix-turn-helix domain E4625_10685 PF11398 Protein of unknown function (DUF2813) E4625_10695 PF00128 Alpha amylase, catalytic domain E4625_10695 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E4625_10740 PF00883 Cytosol aminopeptidase family, catalytic domain E4625_10740 PF02789 Cytosol aminopeptidase family, N-terminal domain E4625_10745 PF13419 Haloacid dehalogenase-like hydrolase E4625_10750 PF07687 Peptidase dimerisation domain E4625_10750 PF01546 Peptidase family M20/M25/M40 E4625_10755 PF00365 Phosphofructokinase E4625_10760 PF00121 Triosephosphate isomerase E4625_10765 PF02698 DUF218 domain E4625_10775 PF03882 MukF winged-helix domain E4625_10775 PF17193 MukF C-terminal domain E4625_10775 PF17192 MukF middle domain E4625_10780 PF04288 MukE-like family E4625_10785 PF16330 MukB hinge domain E4625_10785 PF04310 MukB N-terminal E4625_10790 PF03330 Lytic transglycolase E4625_10790 PF05036 Sporulation related domain E4625_10805 PF01327 Polypeptide deformylase E4625_10835 PF02567 Phenazine biosynthesis-like protein E4625_10855 PF03831 PhnA domain E4625_10855 PF08274 PhnA Zinc-Ribbon E4625_10865 PF00704 Glycosyl hydrolases family 18 E4625_10865 PF08329 Chitinase A, N-terminal domain E4625_10885 PF08448 PAS fold E4625_10885 PF00990 Diguanylate cyclase, GGDEF domain E4625_10895 PF01713 Smr domain E4625_10900 PF05175 Methyltransferase small domain E4625_10905 PF01264 Chorismate synthase E4625_10915 PF00271 Helicase conserved C-terminal domain E4625_10915 PF00270 DEAD/DEAH box helicase E4625_10930 PF03222 Tryptophan/tyrosine permease family E4625_10935 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E4625_10935 PF00356 Bacterial regulatory proteins, lacI family E4625_10940 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4625_10940 PF00381 PTS HPr component phosphorylation site E4625_10945 PF00294 pfkB family carbohydrate kinase E4625_10950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E4625_10950 PF02378 Phosphotransferase system, EIIC E4625_10955 PF06560 Glucose-6-phosphate isomerase (GPI) E4625_10960 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E4625_10960 PF00356 Bacterial regulatory proteins, lacI family E4625_10975 PF03610 PTS system fructose IIA component E4625_10975 PF03830 PTS system sorbose subfamily IIB component E4625_10980 PF03609 PTS system sorbose-specific iic component E4625_10985 PF03613 PTS system mannose/fructose/sorbose family IID component E4625_10995 PF06945 Protein of unknown function (DUF1289) E4625_11000 PF06725 3D domain E4625_11000 PF03562 MltA specific insert domain E4625_11005 PF00111 2Fe-2S iron-sulfur cluster binding domain E4625_11010 PF00268 Ribonucleotide reductase, small chain E4625_11015 PF00317 Ribonucleotide reductase, all-alpha domain E4625_11015 PF03477 ATP cone domain E4625_11015 PF02867 Ribonucleotide reductase, barrel domain E4625_11020 PF13419 Haloacid dehalogenase-like hydrolase E4625_11030 PF03989 DNA gyrase C-terminal domain, beta-propeller E4625_11030 PF00521 DNA gyrase/topoisomerase IV, subunit A E4625_11035 PF04055 Radical SAM superfamily E4625_11045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4625_11045 PF03129 Anticodon binding domain E4625_11045 PF02824 TGS domain E4625_11045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4625_11050 PF00707 Translation initiation factor IF-3, C-terminal domain E4625_11050 PF05198 Translation initiation factor IF-3, N-terminal domain E4625_11055 PF01632 Ribosomal protein L35 E4625_11060 PF00453 Ribosomal protein L20 E4625_11065 PF01409 tRNA synthetases class II core domain (F) E4625_11065 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain E4625_11070 PF03484 tRNA synthetase B5 domain E4625_11070 PF03483 B3/4 domain E4625_11070 PF03147 Ferredoxin-fold anticodon binding domain E4625_11070 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain E4625_11070 PF01588 Putative tRNA binding domain E4625_11075 PF00216 Bacterial DNA-binding protein E4625_11080 PF09456 RcsC Alpha-Beta-Loop (ABL) E4625_11080 PF00072 Response regulator receiver domain E4625_11080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_11080 PF00512 His Kinase A (phospho-acceptor) domain E4625_11095 PF02146 Sir2 family E4625_11105 PF00990 Diguanylate cyclase, GGDEF domain E4625_11105 PF17152 Periplasmic sensor domain E4625_11110 PF00356 Bacterial regulatory proteins, lacI family E4625_11115 PF00294 pfkB family carbohydrate kinase E4625_11120 PF13407 Periplasmic binding protein domain E4625_11125 PF02653 Branched-chain amino acid transport system / permease component E4625_11130 PF00005 ABC transporter E4625_11135 PF05025 RbsD / FucU transport protein family E4625_11140 PF13417 Glutathione S-transferase, N-terminal domain E4625_11155 PF01171 PP-loop family E4625_11160 PF00582 Universal stress protein family E4625_11165 PF13545 Crp-like helix-turn-helix domain E4625_11165 PF00027 Cyclic nucleotide-binding domain E4625_11180 PF00403 Heavy-metal-associated domain E4625_11190 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E4625_11190 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP E4625_11205 PF00115 Cytochrome C and Quinol oxidase polypeptide I E4625_11215 PF13185 GAF domain E4625_11220 PF04352 ProQ/FINO family E4625_11220 PF17516 ProQ C-terminal domain E4625_11225 PF11818 C-terminal domain of tail specific protease (DUF3340) E4625_11225 PF17804 Tail specific protease N-terminal domain E4625_11225 PF03572 Peptidase family S41 E4625_11225 PF00595 PDZ domain E4625_11230 PF17432 Domain of unknown function (DUF3458_C) ARM repeats E4625_11230 PF01433 Peptidase family M1 domain E4625_11230 PF11940 Domain of unknown function (DUF3458) Ig-like fold E4625_11240 PF05088 Bacterial NAD-glutamate dehydrogenase E4625_11245 PF01180 Dihydroorotate dehydrogenase E4625_11250 PF07126 Cell-division protein ZapC E4625_11255 PF01170 Putative RNA methylase family UPF0020 E4625_11255 PF02926 THUMP domain E4625_11255 PF10672 S-adenosylmethionine-dependent methyltransferase E4625_11275 PF04957 Ribosome modulation factor E4625_11280 PF07977 FabA-like domain E4625_11285 PF05362 Lon protease (S16) C-terminal proteolytic domain E4625_11285 PF13654 AAA domain E4625_11295 PF07130 YebG protein E4625_11305 PF00106 short chain dehydrogenase E4625_11330 PF06974 Protein of unknown function (DUF1298) E4625_11330 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain E4625_11345 PF03972 MmgE/PrpD family E4625_11350 PF00285 Citrate synthase, C-terminal domain E4625_11365 PF04403 Paraquat-inducible protein A E4625_11370 PF02470 MlaD protein E4625_11375 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF E4625_11375 PF01189 16S rRNA methyltransferase RsmB/F E4625_11375 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF E4625_11385 PF00589 Phage integrase family E4625_11390 PF01026 TatD related DNase E4625_11395 PF09115 DNA polymerase III, delta subunit, C terminal E4625_11400 PF02223 Thymidylate kinase E4625_11405 PF02618 YceG-like family E4625_11410 PF01063 Amino-transferase class IV E4625_11415 PF02801 Beta-ketoacyl synthase, C-terminal domain E4625_11415 PF00109 Beta-ketoacyl synthase, N-terminal domain E4625_11420 PF00550 Phosphopantetheine attachment site E4625_11430 PF00698 Acyl transferase domain E4625_11435 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E4625_11435 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4625_11440 PF02504 Fatty acid synthesis protein E4625_11445 PF01783 Ribosomal L32p protein family E4625_11450 PF02620 Large ribosomal RNA subunit accumulation protein YceD E4625_11460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_11460 PF03466 LysR substrate binding domain E4625_11465 PF07690 Major Facilitator Superfamily E4625_11470 PF02545 Maf-like protein E4625_11475 PF13419 Haloacid dehalogenase-like hydrolase E4625_11480 PF01479 S4 domain E4625_11480 PF00849 RNA pseudouridylate synthase E4625_11485 PF12111 Polyribonucleotide phosphorylase C terminal E4625_11485 PF10150 Ribonuclease E/G family E4625_11485 PF00575 S1 RNA binding domain E4625_11490 PF01384 Phosphate transporter family E4625_11495 PF00692 dUTPase E4625_11500 PF00485 Phosphoribulokinase / Uridine kinase family E4625_11505 PF10609 NUBPL iron-transfer P-loop NTPase E4625_11510 PF01588 Putative tRNA binding domain E4625_11510 PF09334 tRNA synthetases class I (M) E4625_11510 PF08264 Anticodon-binding domain of tRNA E4625_11515 PF02798 Glutathione S-transferase, N-terminal domain E4625_11515 PF00043 Glutathione S-transferase, C-terminal domain E4625_11520 PF00708 Acylphosphatase E4625_11525 PF02743 Cache domain E4625_11525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_11525 PF00672 HAMP domain E4625_11530 PF17785 PUA-like domain E4625_11530 PF10672 S-adenosylmethionine-dependent methyltransferase E4625_11545 PF00586 AIR synthase related protein, N-terminal domain E4625_11545 PF02769 AIR synthase related protein, C-terminal domain E4625_11555 PF00753 Metallo-beta-lactamase superfamily E4625_11560 PF00072 Response regulator receiver domain E4625_11565 PF01627 Hpt domain E4625_11565 PF00512 His Kinase A (phospho-acceptor) domain E4625_11565 PF00072 Response regulator receiver domain E4625_11565 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E4625_11565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_11565 PF00672 HAMP domain E4625_11570 PF01386 Ribosomal L25p family E4625_11580 PF00270 DEAD/DEAH box helicase E4625_11580 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold E4625_11580 PF04408 Helicase associated domain (HA2) E4625_11580 PF00271 Helicase conserved C-terminal domain E4625_11580 PF11898 Domain of unknown function (DUF3418) E4625_11590 PF00072 Response regulator receiver domain E4625_11590 PF00196 Bacterial regulatory proteins, luxR family E4625_11735 PF00717 Peptidase S24-like E4625_11740 PF00817 impB/mucB/samB family E4625_11740 PF11799 impB/mucB/samB family C-terminal domain E4625_11740 PF11798 IMS family HHH motif E4625_11740 PF13438 Domain of unknown function (DUF4113) E4625_11765 PF05772 NinB protein E4625_11885 PF06630 Enterobacterial exodeoxyribonuclease VIII E4625_11885 PF12684 PDDEXK-like domain of unknown function (DUF3799) E4625_11910 PF12167 Arm DNA-binding domain E4625_11910 PF00589 Phage integrase family E4625_11915 PF02575 YbaB/EbfC DNA-binding family E4625_11920 PF12169 DNA polymerase III subunits gamma and tau domain III E4625_11920 PF12170 DNA polymerase III tau subunit V interacting with alpha E4625_11920 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding E4625_11925 PF00156 Phosphoribosyl transferase domain E4625_11930 PF04304 Protein of unknown function (DUF454) E4625_11935 PF01207 Dihydrouridine synthase (Dus) E4625_11945 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4625_11950 PF01612 3'-5' exonuclease E4625_11950 PF00570 HRDC domain E4625_11955 PF13193 AMP-binding enzyme C-terminal domain E4625_11955 PF00501 AMP-binding enzyme E4625_11960 PF12697 Alpha/beta hydrolase family E4625_11960 PF08241 Methyltransferase domain E4625_11970 PF00814 Glycoprotease family E4625_11980 PF04851 Type III restriction enzyme, res subunit E4625_11980 PF13307 Helicase C-terminal domain E4625_11990 PF08029 HisG, C-terminal domain E4625_11990 PF01634 ATP phosphoribosyltransferase E4625_11995 PF00815 Histidinol dehydrogenase E4625_12000 PF00155 Aminotransferase class I and II E4625_12005 PF00475 Imidazoleglycerol-phosphate dehydratase E4625_12005 PF08645 Polynucleotide kinase 3 phosphatase E4625_12010 PF00117 Glutamine amidotransferase class-I E4625_12015 PF00977 Histidine biosynthesis protein E4625_12020 PF00072 Response regulator receiver domain E4625_12030 PF00512 His Kinase A (phospho-acceptor) domain E4625_12030 PF01627 Hpt domain E4625_12030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_12030 PF00072 Response regulator receiver domain E4625_12035 PF00977 Histidine biosynthesis protein E4625_12040 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase E4625_12040 PF01502 Phosphoribosyl-AMP cyclohydrolase E4625_12050 PF13193 AMP-binding enzyme C-terminal domain E4625_12050 PF00501 AMP-binding enzyme E4625_12055 PF03606 C4-dicarboxylate anaerobic carrier E4625_12065 PF05433 Glycine zipper 2TM domain E4625_12075 PF00111 2Fe-2S iron-sulfur cluster binding domain E4625_12075 PF01799 [2Fe-2S] binding domain E4625_12080 PF00941 FAD binding domain in molybdopterin dehydrogenase E4625_12080 PF03450 CO dehydrogenase flavoprotein C-terminal domain E4625_12085 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain E4625_12085 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase E4625_12090 PF00860 Permease family E4625_12095 PF01979 Amidohydrolase family E4625_12100 PF00860 Permease family E4625_12105 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain E4625_12105 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase E4625_12105 PF01799 [2Fe-2S] binding domain E4625_12110 PF00941 FAD binding domain in molybdopterin dehydrogenase E4625_12115 PF01979 Amidohydrolase family E4625_12120 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4625_12120 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4625_12125 PF12804 MobA-like NTP transferase domain E4625_12135 PF02625 XdhC and CoxI family E4625_12135 PF13478 XdhC Rossmann domain E4625_12140 PF00892 EamA-like transporter family E4625_12145 PF00696 Amino acid kinase family E4625_12150 PF01979 Amidohydrolase family E4625_12155 PF07687 Peptidase dimerisation domain E4625_12155 PF01546 Peptidase family M20/M25/M40 E4625_12160 PF00291 Pyridoxal-phosphate dependent enzyme E4625_12165 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4625_12165 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4625_12180 PF07152 YaeQ protein E4625_12190 PF00378 Enoyl-CoA hydratase/isomerase E4625_12190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E4625_12190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E4625_12195 PF00108 Thiolase, N-terminal domain E4625_12195 PF02803 Thiolase, C-terminal domain E4625_12200 PF07726 ATPase family associated with various cellular activities (AAA) E4625_12200 PF17863 AAA lid domain E4625_12205 PF01882 Protein of unknown function DUF58 E4625_12230 PF08281 Sigma-70, region 4 E4625_12230 PF04542 Sigma-70 region 2 E4625_12240 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) E4625_12245 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) E4625_12250 PF00563 EAL domain E4625_12250 PF08668 HDOD domain E4625_12255 PF00108 Thiolase, N-terminal domain E4625_12255 PF02803 Thiolase, C-terminal domain E4625_12260 PF09278 MerR, DNA binding E4625_12260 PF00376 MerR family regulatory protein E4625_12455 PF06865 Pyrimidine/purine nucleoside phosphorylase E4625_12460 PF03313 Serine dehydratase alpha chain E4625_12460 PF03315 Serine dehydratase beta chain E4625_12470 PF03315 Serine dehydratase beta chain E4625_12470 PF03313 Serine dehydratase alpha chain E4625_12475 PF13406 Transglycosylase SLT domain E4625_12480 PF05166 YcgL domain E4625_12485 PF05209 Septum formation inhibitor MinC, N-terminal domain E4625_12485 PF03775 Septum formation inhibitor MinC, C-terminal domain E4625_12490 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain E4625_12495 PF03776 Septum formation topological specificity factor MinE E4625_12500 PF04269 Protein of unknown function, DUF440 E4625_12505 PF00912 Transglycosylase E4625_12510 PF04269 Protein of unknown function, DUF440 E4625_12520 PF17783 CvfB-like winged helix domain E4625_12520 PF13509 S1 domain E4625_12545 PF02525 Flavodoxin-like fold E4625_12550 PF00892 EamA-like transporter family E4625_12555 PF02222 ATP-grasp domain E4625_12555 PF01370 NAD dependent epimerase/dehydratase family E4625_12560 PF13419 Haloacid dehalogenase-like hydrolase E4625_12570 PF00677 Lumazine binding domain E4625_12575 PF06786 Uncharacterised protein family (UPF0253) E4625_12580 PF01554 MatE E4625_12610 PF00136 DNA polymerase family B E4625_12610 PF03104 DNA polymerase family B, exonuclease domain E4625_12620 PF17151 Periplasmic sensor domain E4625_12620 PF00990 Diguanylate cyclase, GGDEF domain E4625_12635 PF03279 Bacterial lipid A biosynthesis acyltransferase E4625_12640 PF03279 Bacterial lipid A biosynthesis acyltransferase E4625_12650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_12650 PF03466 LysR substrate binding domain E4625_12655 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E4625_12655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E4625_12660 PF01261 Xylose isomerase-like TIM barrel E4625_12665 PF03466 LysR substrate binding domain E4625_12665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_12675 PF01966 HD domain E4625_12685 PF00563 EAL domain E4625_12685 PF13188 PAS domain E4625_12685 PF00990 Diguanylate cyclase, GGDEF domain E4625_12685 PF03707 Bacterial signalling protein N terminal repeat E4625_12690 PF00232 Glycosyl hydrolase family 1 E4625_12695 PF03466 LysR substrate binding domain E4625_12695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_12700 PF13188 PAS domain E4625_12700 PF00990 Diguanylate cyclase, GGDEF domain E4625_12700 PF00563 EAL domain E4625_12700 PF03707 Bacterial signalling protein N terminal repeat E4625_12740 PF02796 Helix-turn-helix domain of resolvase E4625_12740 PF00239 Resolvase, N terminal domain E4625_12750 PF04002 RadC-like JAB domain E4625_12785 PF01925 Sulfite exporter TauE/SafE E4625_12790 PF13520 Amino acid permease E4625_12800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E4625_12800 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E4625_12805 PF00378 Enoyl-CoA hydratase/isomerase E4625_12810 PF00378 Enoyl-CoA hydratase/isomerase E4625_12815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E4625_12815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E4625_12815 PF02770 Acyl-CoA dehydrogenase, middle domain E4625_12820 PF00171 Aldehyde dehydrogenase family E4625_12825 PF02770 Acyl-CoA dehydrogenase, middle domain E4625_12825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E4625_12825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E4625_12830 PF01039 Carboxyl transferase domain E4625_12835 PF00378 Enoyl-CoA hydratase/isomerase E4625_12840 PF00289 Biotin carboxylase, N-terminal domain E4625_12840 PF02785 Biotin carboxylase C-terminal domain E4625_12840 PF00364 Biotin-requiring enzyme E4625_12840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E4625_12845 PF00682 HMGL-like E4625_12850 PF09278 MerR, DNA binding E4625_12850 PF00376 MerR family regulatory protein E4625_12865 PF01184 GPR1/FUN34/yaaH family E4625_12870 PF06167 Glucose-regulated metallo-peptidase M90 E4625_12880 PF01235 Sodium:alanine symporter family E4625_12915 PF00378 Enoyl-CoA hydratase/isomerase E4625_12930 PF04341 Protein of unknown function, DUF485 E4625_12935 PF00474 Sodium:solute symporter family E4625_12940 PF00005 ABC transporter E4625_12940 PF12848 ABC transporter E4625_12945 PF13145 PPIC-type PPIASE domain E4625_12950 PF00216 Bacterial DNA-binding protein E4625_12955 PF00004 ATPase family associated with various cellular activities (AAA) E4625_12955 PF02190 ATP-dependent protease La (LON) substrate-binding domain E4625_12955 PF05362 Lon protease (S16) C-terminal proteolytic domain E4625_12960 PF07724 AAA domain (Cdc48 subfamily) E4625_12960 PF10431 C-terminal, D2-small domain, of ClpB protein E4625_12960 PF06689 ClpX C4-type zinc finger E4625_12965 PF00574 Clp protease E4625_12970 PF05698 Bacterial trigger factor protein (TF) C-terminus E4625_12970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4625_12970 PF05697 Bacterial trigger factor protein (TF) E4625_12990 PF12704 MacB-like periplasmic core domain E4625_12990 PF02687 FtsX-like permease family E4625_12995 PF00005 ABC transporter E4625_13000 PF12704 MacB-like periplasmic core domain E4625_13000 PF02687 FtsX-like permease family E4625_13010 PF03461 TRCF domain E4625_13010 PF17757 UvrB interaction domain E4625_13010 PF00271 Helicase conserved C-terminal domain E4625_13010 PF00270 DEAD/DEAH box helicase E4625_13010 PF02559 CarD-like/TRCF domain E4625_13015 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain E4625_13020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4625_13025 PF00892 EamA-like transporter family E4625_13035 PF00300 Histidine phosphatase superfamily (branch 1) E4625_13040 PF05193 Peptidase M16 inactive domain E4625_13040 PF00675 Insulinase (Peptidase family M16) E4625_13045 PF05724 Thiopurine S-methyltransferase (TPMT) E4625_13060 PF02805 Metal binding domain of Ada E4625_13060 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E4625_13060 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E4625_13060 PF12833 Helix-turn-helix domain E4625_13075 PF00117 Glutamine amidotransferase class-I E4625_13075 PF02540 NAD synthase E4625_13075 PF00958 GMP synthase C terminal domain E4625_13080 PF00571 CBS domain E4625_13080 PF00478 IMP dehydrogenase / GMP reductase domain E4625_13090 PF02705 K+ potassium transporter E4625_13100 PF01618 MotA/TolQ/ExbB proton channel family E4625_13105 PF02472 Biopolymer transport protein ExbD/TolR E4625_13110 PF00892 EamA-like transporter family E4625_13115 PF13742 OB-fold nucleic acid binding domain E4625_13115 PF02601 Exonuclease VII, large subunit E4625_13120 PF04055 Radical SAM superfamily E4625_13125 PF00672 HAMP domain E4625_13125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_13130 PF00793 DAHP synthetase I family E4625_13135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4625_13140 PF00266 Aminotransferase class-V E4625_13145 PF01012 Electron transfer flavoprotein domain E4625_13145 PF00766 Electron transfer flavoprotein FAD-binding domain E4625_13150 PF01012 Electron transfer flavoprotein domain E4625_13160 PF01544 CorA-like Mg2+ transporter protein E4625_13165 PF11143 Protein of unknown function (DUF2919) E4625_13180 PF07715 TonB-dependent Receptor Plug Domain E4625_13180 PF00593 TonB dependent receptor E4625_13185 PF01032 FecCD transport family E4625_13190 PF01032 FecCD transport family E4625_13195 PF00005 ABC transporter E4625_13200 PF01648 4'-phosphopantetheinyl transferase superfamily E4625_13200 PF17837 4'-phosphopantetheinyl transferase N-terminal domain E4625_13205 PF01497 Periplasmic binding protein E4625_13210 PF01212 Beta-eliminating lyase E4625_13220 PF04244 Deoxyribodipyrimidine photo-lyase-related protein E4625_13225 PF01266 FAD dependent oxidoreductase E4625_13235 PF07969 Amidohydrolase family E4625_13240 PF00571 CBS domain E4625_13240 PF00478 IMP dehydrogenase / GMP reductase domain E4625_13250 PF08267 Cobalamin-independent synthase, N-terminal domain E4625_13250 PF01717 Cobalamin-independent synthase, Catalytic domain E4625_13255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_13255 PF03466 LysR substrate binding domain E4625_13260 PF03466 LysR substrate binding domain E4625_13260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_13265 PF00857 Isochorismatase family E4625_13270 PF05726 Pirin C-terminal cupin domain E4625_13270 PF02678 Pirin E4625_13285 PF07715 TonB-dependent Receptor Plug Domain E4625_13285 PF00593 TonB dependent receptor E4625_13290 PF12833 Helix-turn-helix domain E4625_13295 PF00106 short chain dehydrogenase E4625_13300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_13300 PF03466 LysR substrate binding domain E4625_13305 PF13460 NAD(P)H-binding E4625_13315 PF01053 Cys/Met metabolism PLP-dependent enzyme E4625_13320 PF05193 Peptidase M16 inactive domain E4625_13320 PF00675 Insulinase (Peptidase family M16) E4625_13325 PF01118 Semialdehyde dehydrogenase, NAD binding domain E4625_13325 PF02774 Semialdehyde dehydrogenase, dimerisation domain E4625_13330 PF00893 Small Multidrug Resistance protein E4625_13335 PF18381 YcaO cyclodehydratase C-terminal domain E4625_13335 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding E4625_13340 PF01226 Formate/nitrite transporter E4625_13345 PF01228 Glycine radical E4625_13345 PF02901 Pyruvate formate lyase-like E4625_13360 PF00266 Aminotransferase class-V E4625_13365 PF00392 Bacterial regulatory proteins, gntR family E4625_13365 PF07702 UTRA domain E4625_13375 PF00005 ABC transporter E4625_13380 PF00528 Binding-protein-dependent transport system inner membrane component E4625_13385 PF01266 FAD dependent oxidoreductase E4625_13390 PF03692 Putative zinc- or iron-chelating domain E4625_13400 PF02629 CoA binding domain E4625_13400 PF00549 CoA-ligase E4625_13405 PF00549 CoA-ligase E4625_13405 PF08442 ATP-grasp domain E4625_13410 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E4625_13410 PF00364 Biotin-requiring enzyme E4625_13410 PF02817 e3 binding domain E4625_13415 PF16078 2-oxoglutarate dehydrogenase N-terminus E4625_13415 PF00676 Dehydrogenase E1 component E4625_13415 PF02779 Transketolase, pyrimidine binding domain E4625_13415 PF16870 2-oxoglutarate dehydrogenase C-terminal E4625_13420 PF13085 2Fe-2S iron-sulfur cluster binding domain E4625_13425 PF02910 Fumarate reductase flavoprotein C-term E4625_13425 PF00890 FAD binding domain E4625_13430 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E4625_13435 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E4625_13440 PF00285 Citrate synthase, C-terminal domain E4625_13455 PF00109 Beta-ketoacyl synthase, N-terminal domain E4625_13455 PF02801 Beta-ketoacyl synthase, C-terminal domain E4625_13460 PF01266 FAD dependent oxidoreductase E4625_13460 PF05430 S-adenosyl-L-methionine-dependent methyltransferase E4625_13470 PF03606 C4-dicarboxylate anaerobic carrier E4625_13485 PF01863 Protein of unknown function DUF45 E4625_13500 PF01197 Ribosomal protein L31 E4625_13505 PF00444 Ribosomal protein L36 E4625_13510 PF02678 Pirin E4625_13510 PF05726 Pirin C-terminal cupin domain E4625_13515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_13515 PF03466 LysR substrate binding domain E4625_13520 PF12833 Helix-turn-helix domain E4625_13520 PF02311 AraC-like ligand binding domain E4625_13525 PF02653 Branched-chain amino acid transport system / permease component E4625_13530 PF00005 ABC transporter E4625_13535 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E4625_13540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4625_13545 PF00596 Class II Aldolase and Adducin N-terminal domain E4625_13550 PF11762 L-arabinose isomerase C-terminal domain E4625_13550 PF02610 L-arabinose isomerase E4625_13585 PF00816 H-NS histone family E4625_13595 PF00717 Peptidase S24-like E4625_13600 PF11799 impB/mucB/samB family C-terminal domain E4625_13600 PF00817 impB/mucB/samB family E4625_13600 PF13438 Domain of unknown function (DUF4113) E4625_13620 PF00080 Copper/zinc superoxide dismutase (SODC) E4625_13630 PF06628 Catalase-related immune-responsive E4625_13630 PF00199 Catalase E4625_13685 PF08411 Exonuclease C-terminal E4625_13685 PF00929 Exonuclease E4625_13700 PF03788 LrgA family E4625_13705 PF04172 LrgB-like family E4625_13710 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region E4625_13710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E4625_13715 PF00501 AMP-binding enzyme E4625_13720 PF08891 YfcL protein E4625_13730 PF03741 Integral membrane protein TerC family E4625_13735 PF00691 OmpA family E4625_13740 PF17152 Periplasmic sensor domain E4625_13740 PF00990 Diguanylate cyclase, GGDEF domain E4625_13745 PF13689 YfiR/HmsC-like E4625_13750 PF00158 Sigma-54 interaction domain E4625_13750 PF18024 Helix-turn-helix domain E4625_13760 PF01329 Pterin 4 alpha carbinolamine dehydratase E4625_13765 PF00351 Biopterin-dependent aromatic amino acid hydroxylase E4625_13770 PF05128 Domain of unknown function (DUF697) E4625_13775 PF04317 YcjX-like family, DUF463 E4625_13785 PF06667 Phage shock protein B E4625_13790 PF04012 PspA/IM30 family E4625_13795 PF00158 Sigma-54 interaction domain E4625_13795 PF02954 Bacterial regulatory protein, Fis family E4625_13800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4625_13805 PF00528 Binding-protein-dependent transport system inner membrane component E4625_13810 PF12911 N-terminal TM domain of oligopeptide transport permease C E4625_13810 PF00528 Binding-protein-dependent transport system inner membrane component E4625_13815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4625_13815 PF00005 ABC transporter E4625_13820 PF00005 ABC transporter E4625_13825 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) E4625_13830 PF00156 Phosphoribosyl transferase domain E4625_13835 PF02674 Colicin V production protein E4625_13840 PF02403 Seryl-tRNA synthetase N-terminal domain E4625_13840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4625_13845 PF16193 AAA C-terminal domain E4625_13845 PF12002 MgsA AAA+ ATPase C terminal E4625_13845 PF00004 ATPase family associated with various cellular activities (AAA) E4625_13850 PF03548 Outer membrane lipoprotein carrier protein LolA E4625_13855 PF01580 FtsK/SpoIIIE family E4625_13855 PF09397 Ftsk gamma domain E4625_13855 PF13491 4TM region of DNA translocase FtsK/SpoIIIE E4625_13855 PF17854 FtsK alpha domain E4625_13860 PF01037 Lrp/AsnC ligand binding domain E4625_13865 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E4625_13865 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E4625_13870 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4625_13875 PF17158 Membrane-associated sensor, integral membrane domain E4625_13875 PF00990 Diguanylate cyclase, GGDEF domain E4625_13880 PF05433 Glycine zipper 2TM domain E4625_13885 PF03588 Leucyl/phenylalanyl-tRNA protein transferase E4625_13890 PF04377 Arginine-tRNA-protein transferase, C terminus E4625_13890 PF04376 Arginine-tRNA-protein transferase, N terminus E4625_13895 PF01176 Translation initiation factor 1A / IF-1 E4625_13900 PF17871 AAA lid domain E4625_13900 PF02861 Clp amino terminal domain, pathogenicity island component E4625_13900 PF00004 ATPase family associated with various cellular activities (AAA) E4625_13900 PF07724 AAA domain (Cdc48 subfamily) E4625_13900 PF10431 C-terminal, D2-small domain, of ClpB protein E4625_13905 PF02617 ATP-dependent Clp protease adaptor protein ClpS E4625_13910 PF00313 'Cold-shock' DNA-binding domain E4625_13915 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E4625_13915 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E4625_13955 PF04717 Type VI secretion system, phage-baseplate injector E4625_13985 PF00158 Sigma-54 interaction domain E4625_13985 PF06505 Activator of aromatic catabolism E4625_13985 PF02830 V4R domain E4625_13985 PF02954 Bacterial regulatory protein, Fis family E4625_13990 PF17871 AAA lid domain E4625_13990 PF10431 C-terminal, D2-small domain, of ClpB protein E4625_13990 PF00004 ATPase family associated with various cellular activities (AAA) E4625_13990 PF07724 AAA domain (Cdc48 subfamily) E4625_14060 PF04717 Type VI secretion system, phage-baseplate injector E4625_14065 PF05638 Type VI secretion system effector, Hcp E4625_14075 PF00589 Phage integrase family E4625_14075 PF13356 Arm DNA-binding domain E4625_14080 PF04962 KduI/IolB family E4625_14085 PF01261 Xylose isomerase-like TIM barrel E4625_14090 PF00294 pfkB family carbohydrate kinase E4625_14095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E4625_14095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E4625_14100 PF07733 Bacterial DNA polymerase III alpha NTPase domain E4625_14100 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E4625_14100 PF14579 Helix-hairpin-helix motif E4625_14100 PF02811 PHP domain E4625_14100 PF00929 Exonuclease E4625_14110 PF00474 Sodium:solute symporter family E4625_14115 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E4625_14115 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E4625_14120 PF00205 Thiamine pyrophosphate enzyme, central domain E4625_14120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4625_14120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E4625_14130 PF00171 Aldehyde dehydrogenase family E4625_14160 PF04717 Type VI secretion system, phage-baseplate injector E4625_14170 PF05638 Type VI secretion system effector, Hcp E4625_14185 PF13086 AAA domain E4625_14185 PF13087 AAA domain E4625_14185 PF13195 Protein of unknown function (DUF4011) E4625_14195 PF01695 IstB-like ATP binding protein E4625_14200 PF00665 Integrase core domain E4625_14200 PF02796 Helix-turn-helix domain of resolvase E4625_14220 PF01483 Proprotein convertase P-domain E4625_14220 PF00082 Subtilase family E4625_14245 PF13737 Transposase DDE domain E4625_14255 PF13148 Protein of unknown function (DUF3987) E4625_14275 PF02796 Helix-turn-helix domain of resolvase E4625_14275 PF00239 Resolvase, N terminal domain E4625_14305 PF04002 RadC-like JAB domain E4625_14345 PF07702 UTRA domain E4625_14345 PF00392 Bacterial regulatory proteins, gntR family E4625_14350 PF03747 ADP-ribosylglycohydrolase E4625_14360 PF00294 pfkB family carbohydrate kinase E4625_14365 PF05958 tRNA (Uracil-5-)-methyltransferase E4625_14370 PF01695 IstB-like ATP binding protein E4625_14375 PF02954 Bacterial regulatory protein, Fis family E4625_14375 PF13426 PAS domain E4625_14375 PF00158 Sigma-54 interaction domain E4625_14385 PF13520 Amino acid permease E4625_14395 PF10722 Putative bacterial sensory transduction regulator E4625_14405 PF00265 Thymidine kinase E4625_14410 PF03553 Na+/H+ antiporter family E4625_14415 PF00816 H-NS histone family E4625_14420 PF01923 Cobalamin adenosyltransferase E4625_14425 PF12843 Putative quorum-sensing-regulated virulence factor E4625_14430 PF04055 Radical SAM superfamily E4625_14435 PF06508 Queuosine biosynthesis protein QueC E4625_14450 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E4625_14455 PF18073 Rubredoxin metal binding domain E4625_14465 PF00216 Bacterial DNA-binding protein E4625_14470 PF00575 S1 RNA binding domain E4625_14475 PF02224 Cytidylate kinase E4625_14480 PF00925 GTP cyclohydrolase II E4625_14485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_14485 PF03466 LysR substrate binding domain E4625_14490 PF03466 LysR substrate binding domain E4625_14490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_14495 PF07690 Major Facilitator Superfamily E4625_14510 PF00881 Nitroreductase family E4625_14515 PF03707 Bacterial signalling protein N terminal repeat E4625_14515 PF00990 Diguanylate cyclase, GGDEF domain E4625_14515 PF00563 EAL domain E4625_14515 PF13188 PAS domain E4625_14525 PF03466 LysR substrate binding domain E4625_14525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_14530 PF00072 Response regulator receiver domain E4625_14540 PF01212 Beta-eliminating lyase E4625_14555 PF00248 Aldo/keto reductase family E4625_14560 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) E4625_14570 PF03411 Penicillin-insensitive murein endopeptidase E4625_14580 PF04536 TPM domain E4625_14605 PF02796 Helix-turn-helix domain of resolvase E4625_14605 PF00239 Resolvase, N terminal domain E4625_14610 PF13614 AAA domain E4625_14620 PF01618 MotA/TolQ/ExbB proton channel family E4625_14625 PF13677 Membrane MotB of proton-channel complex MotA/MotB E4625_14625 PF00691 OmpA family E4625_14630 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 E4625_14635 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E4625_14640 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit E4625_14640 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit E4625_14650 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E4625_14650 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4625_14655 PF00384 Molybdopterin oxidoreductase E4625_14655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E4625_14655 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E4625_14660 PF00146 NADH dehydrogenase E4625_14665 PF12838 4Fe-4S dicluster domain E4625_14670 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 E4625_14675 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L E4625_14680 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus E4625_14680 PF00361 Proton-conducting membrane transporter E4625_14685 PF00361 Proton-conducting membrane transporter E4625_14690 PF00361 Proton-conducting membrane transporter E4625_14705 PF01966 HD domain E4625_14710 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal E4625_14710 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain E4625_14710 PF02769 AIR synthase related protein, C-terminal domain E4625_14715 PF01464 Transglycosylase SLT domain E4625_14715 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4625_14725 PF07191 zinc-ribbons E4625_14730 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E4625_14730 PF01926 50S ribosome-binding GTPase E4625_14735 PF13360 PQQ-like domain E4625_14740 PF09976 Tetratricopeptide repeat-like domain E4625_14745 PF03129 Anticodon binding domain E4625_14745 PF13393 Histidyl-tRNA synthetase E4625_14750 PF04551 GcpE protein E4625_14755 PF13464 Domain of unknown function (DUF4115) E4625_14765 PF04055 Radical SAM superfamily E4625_14770 PF00334 Nucleoside diphosphate kinase E4625_14775 PF12404 Peptidase E4625_14775 PF00883 Cytosol aminopeptidase family, catalytic domain E4625_14780 PF00883 Cytosol aminopeptidase family, catalytic domain E4625_14780 PF12404 Peptidase E4625_14785 PF00111 2Fe-2S iron-sulfur cluster binding domain E4625_14790 PF00012 Hsp70 protein E4625_14795 PF07743 HSCB C-terminal oligomerisation domain E4625_14800 PF01521 Iron-sulphur cluster biosynthesis E4625_14805 PF01592 NifU-like N terminal domain E4625_14810 PF00266 Aminotransferase class-V E4625_14815 PF02082 Transcriptional regulator E4625_14820 PF00588 SpoU rRNA Methylase family E4625_14845 PF07719 Tetratricopeptide repeat E4625_14845 PF13181 Tetratricopeptide repeat E4625_14855 PF07549 SecD/SecF GG Motif E4625_14855 PF02355 Protein export membrane protein E4625_14860 PF02355 Protein export membrane protein E4625_14860 PF13721 SecD export protein N-terminal TM region E4625_14860 PF07549 SecD/SecF GG Motif E4625_14865 PF02699 Preprotein translocase subunit E4625_14870 PF01702 Queuine tRNA-ribosyltransferase E4625_14875 PF02547 Queuosine biosynthesis protein E4625_14880 PF00571 CBS domain E4625_14885 PF10417 C-terminal domain of 1-Cys peroxiredoxin E4625_14885 PF00578 AhpC/TSA family E4625_14890 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4625_14890 PF13192 Thioredoxin domain E4625_14900 PF00975 Thioesterase domain E4625_14900 PF00501 AMP-binding enzyme E4625_14900 PF13193 AMP-binding enzyme C-terminal domain E4625_14900 PF00668 Condensation domain E4625_14900 PF00391 PEP-utilising enzyme, mobile domain E4625_14900 PF08241 Methyltransferase domain E4625_14900 PF00550 Phosphopantetheine attachment site E4625_14905 PF03960 ArsC family E4625_14910 PF01758 Sodium Bile acid symporter family E4625_14915 PF01022 Bacterial regulatory protein, arsR family E4625_14920 PF02347 Glycine cleavage system P-protein E4625_14925 PF01597 Glycine cleavage H-protein E4625_14930 PF08669 Glycine cleavage T-protein C-terminal barrel domain E4625_14930 PF01571 Aminomethyltransferase folate-binding domain E4625_14935 PF01494 FAD binding domain E4625_14940 PF01494 FAD binding domain E4625_14945 PF03695 Uncharacterised protein family (UPF0149) E4625_14950 PF05164 Cell division protein ZapA E4625_14960 PF07690 Major Facilitator Superfamily E4625_14965 PF02798 Glutathione S-transferase, N-terminal domain E4625_14965 PF00043 Glutathione S-transferase, C-terminal domain E4625_14975 PF00459 Inositol monophosphatase family E4625_14980 PF00672 HAMP domain E4625_14980 PF12729 Four helix bundle sensory module for signal transduction E4625_14980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_14985 PF02535 ZIP Zinc transporter E4625_14995 PF01048 Phosphorylase superfamily E4625_15005 PF01497 Periplasmic binding protein E4625_15020 PF02561 Flagellar protein FliS E4625_15025 PF02465 Flagellar hook-associated protein 2 N-terminus E4625_15025 PF07196 Flagellin hook IN motif E4625_15025 PF07195 Flagellar hook-associated protein 2 C-terminus E4625_15035 PF00669 Bacterial flagellin N-terminal helical region E4625_15035 PF00700 Bacterial flagellin C-terminal helical region E4625_15040 PF00669 Bacterial flagellin N-terminal helical region E4625_15040 PF00700 Bacterial flagellin C-terminal helical region E4625_15050 PF03458 UPF0126 domain E4625_15060 PF02568 Thiamine biosynthesis protein (ThiI) E4625_15060 PF02926 THUMP domain E4625_15070 PF06832 Penicillin-Binding Protein C-terminus Family E4625_15070 PF00912 Transglycosylase E4625_15070 PF00905 Penicillin binding protein transpeptidase domain E4625_15075 PF01835 MG2 domain E4625_15075 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain E4625_15075 PF07703 Alpha-2-macroglobulin bait region domain E4625_15075 PF00207 Alpha-2-macroglobulin family E4625_15075 PF11974 Bacterial alpha-2-macroglobulin MG3 domain E4625_15075 PF17962 Bacterial macroglobulin domain 6 E4625_15075 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain E4625_15075 PF07678 A-macroglobulin TED domain E4625_15075 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain E4625_15080 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4625_15080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4625_15085 PF00563 EAL domain E4625_15085 PF00990 Diguanylate cyclase, GGDEF domain E4625_15085 PF03707 Bacterial signalling protein N terminal repeat E4625_15090 PF04055 Radical SAM superfamily E4625_15100 PF00528 Binding-protein-dependent transport system inner membrane component E4625_15105 PF00528 Binding-protein-dependent transport system inner membrane component E4625_15110 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4625_15115 PF00005 ABC transporter E4625_15120 PF03956 Lysine exporter LysO E4625_15125 PF01979 Amidohydrolase family E4625_15130 PF04336 Acyl carrier protein phosphodiesterase E4625_15145 PF03960 ArsC family E4625_15150 PF00578 AhpC/TSA family E4625_15155 PF01435 Peptidase family M48 E4625_15155 PF13181 Tetratricopeptide repeat E4625_15160 PF01206 Sulfurtransferase TusA E4625_15165 PF01594 AI-2E family transporter E4625_15175 PF00561 alpha/beta hydrolase fold E4625_15180 PF03976 Polyphosphate kinase 2 (PPK2) E4625_15185 PF00005 ABC transporter E4625_15185 PF08402 TOBE domain E4625_15190 PF00528 Binding-protein-dependent transport system inner membrane component E4625_15195 PF00528 Binding-protein-dependent transport system inner membrane component E4625_15195 PF14785 Maltose transport system permease protein MalF P2 domain E4625_15200 PF01547 Bacterial extracellular solute-binding protein E4625_15205 PF04245 37-kD nucleoid-associated bacterial protein E4625_15210 PF07208 Protein of unknown function (DUF1414) E4625_15215 PF11893 Domain of unknown function (DUF3413) E4625_15215 PF00884 Sulfatase E4625_15220 PF00593 TonB dependent receptor E4625_15220 PF07715 TonB-dependent Receptor Plug Domain E4625_15225 PF00326 Prolyl oligopeptidase family E4625_15225 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4625_15245 PF03974 Ecotin E4625_15250 PF04219 Protein of unknown function, DUF E4625_15255 PF03466 LysR substrate binding domain E4625_15255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_15260 PF01817 Chorismate mutase type II E4625_15260 PF02153 Prephenate dehydrogenase E4625_15265 PF00793 DAHP synthetase I family E4625_15270 PF03009 Glycerophosphoryl diester phosphodiesterase family E4625_15275 PF01266 FAD dependent oxidoreductase E4625_15275 PF16901 C-terminal domain of alpha-glycerophosphate oxidase E4625_15280 PF08220 DeoR-like helix-turn-helix domain E4625_15280 PF00455 DeoR C terminal sensor domain E4625_15285 PF07690 Major Facilitator Superfamily E4625_15290 PF00230 Major intrinsic protein E4625_15295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4625_15295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4625_15300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_15300 PF03466 LysR substrate binding domain E4625_15330 PF00248 Aldo/keto reductase family E4625_15335 PF07690 Major Facilitator Superfamily E4625_15345 PF02322 Cytochrome bd terminal oxidase subunit II E4625_15350 PF01654 Cytochrome bd terminal oxidase subunit I E4625_15355 PF00155 Aminotransferase class I and II E4625_15355 PF00392 Bacterial regulatory proteins, gntR family E4625_15365 PF04391 Protein of unknown function (DUF533) E4625_15380 PF10689 Protein of unknown function (DUF2496) E4625_15390 PF07690 Major Facilitator Superfamily E4625_15395 PF03466 LysR substrate binding domain E4625_15395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_15405 PF07690 Major Facilitator Superfamily E4625_15410 PF01479 S4 domain E4625_15410 PF00849 RNA pseudouridylate synthase E4625_15420 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E4625_15420 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E4625_15430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4625_15440 PF04851 Type III restriction enzyme, res subunit E4625_15440 PF00271 Helicase conserved C-terminal domain E4625_15445 PF00300 Histidine phosphatase superfamily (branch 1) E4625_15450 PF08348 YheO-like PAS domain E4625_15450 PF13309 HTH domain E4625_15455 PF03313 Serine dehydratase alpha chain E4625_15460 PF01042 Endoribonuclease L-PSP E4625_15470 PF00672 HAMP domain E4625_15470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_15485 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E4625_15485 PF17810 Arginine decarboxylase helical bundle domain E4625_15485 PF17944 Arginine decarboxylase C-terminal helical extension E4625_15505 PF01546 Peptidase family M20/M25/M40 E4625_15505 PF07687 Peptidase dimerisation domain E4625_15530 PF04264 YceI-like domain E4625_15535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_15535 PF03466 LysR substrate binding domain E4625_15545 PF01268 Formate--tetrahydrofolate ligase E4625_15555 PF17200 Single Cache domain 2 E4625_15555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_15555 PF00672 HAMP domain E4625_15560 PF01227 GTP cyclohydrolase I E4625_15565 PF03453 MoeA N-terminal region (domain I and II) E4625_15565 PF03454 MoeA C-terminal region (domain IV) E4625_15565 PF00994 Probable molybdopterin binding domain E4625_15570 PF00899 ThiF family E4625_15575 PF00561 alpha/beta hydrolase fold E4625_15580 PF03459 TOBE domain E4625_15580 PF00005 ABC transporter E4625_15585 PF00528 Binding-protein-dependent transport system inner membrane component E4625_15595 PF02391 MoaE protein E4625_15600 PF02597 ThiS family E4625_15605 PF01967 MoaC family E4625_15610 PF00994 Probable molybdopterin binding domain E4625_15615 PF03264 NapC/NirT cytochrome c family, N-terminal region E4625_15620 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) E4625_15625 PF12801 4Fe-4S binding domain E4625_15625 PF13237 4Fe-4S dicluster domain E4625_15630 PF12800 4Fe-4S binding domain E4625_15630 PF12838 4Fe-4S dicluster domain E4625_15635 PF00384 Molybdopterin oxidoreductase E4625_15635 PF01568 Molydopterin dinucleotide binding domain E4625_15635 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E4625_15635 PF10518 TAT (twin-arginine translocation) pathway signal sequence E4625_15645 PF12800 4Fe-4S binding domain E4625_15645 PF13187 4Fe-4S dicluster domain E4625_15645 PF00037 4Fe-4S binding domain E4625_15650 PF06463 Molybdenum Cofactor Synthesis C E4625_15650 PF04055 Radical SAM superfamily E4625_15655 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term E4625_15655 PF00672 HAMP domain E4625_15655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_15655 PF07730 Histidine kinase E4625_15660 PF00196 Bacterial regulatory proteins, luxR family E4625_15660 PF00072 Response regulator receiver domain E4625_15670 PF00512 His Kinase A (phospho-acceptor) domain E4625_15670 PF00072 Response regulator receiver domain E4625_15670 PF09456 RcsC Alpha-Beta-Loop (ABL) E4625_15670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_15680 PF01933 Uncharacterised protein family UPF0052 E4625_15690 PF13230 Glutamine amidotransferases class-II E4625_15695 PF13580 SIS domain E4625_15700 PF09317 Domain of unknown function (DUF1974) E4625_15700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E4625_15700 PF02770 Acyl-CoA dehydrogenase, middle domain E4625_15700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E4625_15705 PF11849 Domain of unknown function (DUF3369) E4625_15715 PF00929 Exonuclease E4625_15720 PF00075 RNase H E4625_15725 PF08241 Methyltransferase domain E4625_15730 PF16123 Hydroxyacylglutathione hydrolase C-terminus E4625_15730 PF00753 Metallo-beta-lactamase superfamily E4625_15735 PF01476 LysM domain E4625_15735 PF01464 Transglycosylase SLT domain E4625_15740 PF03372 Endonuclease/Exonuclease/phosphatase family E4625_15750 PF03061 Thioesterase superfamily E4625_15760 PF00356 Bacterial regulatory proteins, lacI family E4625_15765 PF14718 Soluble lytic murein transglycosylase L domain E4625_15765 PF01464 Transglycosylase SLT domain E4625_15770 PF03707 Bacterial signalling protein N terminal repeat E4625_15770 PF00990 Diguanylate cyclase, GGDEF domain E4625_15770 PF00563 EAL domain E4625_15775 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein E4625_15795 PF04357 TamB, inner membrane protein subunit of TAM complex E4625_15800 PF07244 Surface antigen variable number repeat E4625_15800 PF01103 Surface antigen E4625_15800 PF17243 POTRA domain TamA domain 1 E4625_15815 PF01625 Peptide methionine sulfoxide reductase E4625_15825 PF02627 Carboxymuconolactone decarboxylase family E4625_15830 PF00403 Heavy-metal-associated domain E4625_15830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4625_15830 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4625_15835 PF13416 Bacterial extracellular solute-binding protein E4625_15845 PF00005 ABC transporter E4625_15850 PF01066 CDP-alcohol phosphatidyltransferase E4625_15855 PF13406 Transglycosylase SLT domain E4625_15870 PF01047 MarR family E4625_15880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4625_15880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4625_15880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4625_15880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4625_15885 PF03925 SeqA protein C-terminal domain E4625_15885 PF17206 SeqA protein N-terminal domain E4625_15890 PF12697 Alpha/beta hydrolase family E4625_15900 PF01402 Ribbon-helix-helix protein, copG family E4625_15905 PF00258 Flavodoxin E4625_15915 PF01475 Ferric uptake regulator family E4625_15920 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain E4625_15920 PF00749 tRNA synthetases class I (E and Q), catalytic domain E4625_15925 PF02838 Glycosyl hydrolase family 20, domain 2 E4625_15925 PF00728 Glycosyl hydrolase family 20, catalytic domain E4625_15925 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain E4625_15925 PF03173 Putative carbohydrate binding domain E4625_15930 PF00367 phosphotransferase system, EIIB E4625_15930 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E4625_15930 PF02378 Phosphotransferase system, EIIC E4625_15935 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase E4625_15940 PF01979 Amidohydrolase family E4625_15945 PF01047 MarR family E4625_15945 PF00480 ROK family E4625_15950 PF00884 Sulfatase E4625_15950 PF08019 Phosphoethanolamine transferase EptA/EptB E4625_15955 PF01709 Transcriptional regulator E4625_15960 PF02938 GAD domain E4625_15960 PF00152 tRNA synthetases class II (D, K and N) E4625_15960 PF01336 OB-fold nucleic acid binding domain E4625_15965 PF01904 Protein of unknown function DUF72 E4625_15970 PF13649 Methyltransferase domain E4625_15975 PF08003 Protein of unknown function (DUF1698) E4625_15995 PF00578 AhpC/TSA family E4625_15995 PF10417 C-terminal domain of 1-Cys peroxiredoxin E4625_16000 PF03466 LysR substrate binding domain E4625_16000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_16005 PF07968 Leukocidin/Hemolysin toxin family E4625_16005 PF12563 Hemolytic toxin N terminal E4625_16010 PF00877 NlpC/P60 family E4625_16020 PF00171 Aldehyde dehydrogenase family E4625_16025 PF08359 YsiA-like protein, C-terminal region E4625_16025 PF00440 Bacterial regulatory proteins, tetR family E4625_16035 PF00465 Iron-containing alcohol dehydrogenase E4625_16045 PF00291 Pyridoxal-phosphate dependent enzyme E4625_16065 PF01554 MatE E4625_16085 PF10371 Domain of unknown function E4625_16085 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E4625_16085 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E4625_16085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4625_16085 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E4625_16090 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4625_16090 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E4625_16090 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4625_16095 PF00111 2Fe-2S iron-sulfur cluster binding domain E4625_16095 PF03473 MOSC domain E4625_16095 PF03473 MOSC domain E4625_16095 PF03476 MOSC N-terminal beta barrel domain E4625_16095 PF00111 2Fe-2S iron-sulfur cluster binding domain E4625_16095 PF03476 MOSC N-terminal beta barrel domain E4625_16100 PF13426 PAS domain E4625_16100 PF08447 PAS fold E4625_16100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_16105 PF01435 Peptidase family M48 E4625_16115 PF08241 Methyltransferase domain E4625_16115 PF12697 Alpha/beta hydrolase family E4625_16120 PF00155 Aminotransferase class I and II E4625_16125 PF04055 Radical SAM superfamily E4625_16125 PF06968 Biotin and Thiamin Synthesis associated domain E4625_16145 PF00152 tRNA synthetases class II (D, K and N) E4625_16145 PF01336 OB-fold nucleic acid binding domain E4625_16150 PF03605 Anaerobic c4-dicarboxylate membrane transporter E4625_16160 PF01546 Peptidase family M20/M25/M40 E4625_16160 PF07687 Peptidase dimerisation domain E4625_16165 PF03606 C4-dicarboxylate anaerobic carrier E4625_16175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_16175 PF03466 LysR substrate binding domain E4625_16180 PF03960 ArsC family E4625_16185 PF01546 Peptidase family M20/M25/M40 E4625_16185 PF07687 Peptidase dimerisation domain E4625_16190 PF02557 D-alanyl-D-alanine carboxypeptidase E4625_16200 PF02080 TrkA-C domain E4625_16200 PF03471 Transporter associated domain E4625_16200 PF00999 Sodium/hydrogen exchanger family E4625_16210 PF03471 Transporter associated domain E4625_16210 PF02080 TrkA-C domain E4625_16210 PF00999 Sodium/hydrogen exchanger family E4625_16225 PF01810 LysE type translocator E4625_16230 PF00672 HAMP domain E4625_16230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_16235 PF07509 Protein of unknown function (DUF1523) E4625_16250 PF01156 Inosine-uridine preferring nucleoside hydrolase E4625_16255 PF00849 RNA pseudouridylate synthase E4625_16260 PF01048 Phosphorylase superfamily E4625_16265 PF00465 Iron-containing alcohol dehydrogenase E4625_16270 PF04355 SmpA / OmlA family E4625_16275 PF13460 NAD(P)H-binding E4625_16285 PF03364 Polyketide cyclase / dehydrase and lipid transport E4625_16290 PF01668 SmpB protein E4625_16300 PF08346 AntA/AntB antirepressor E4625_16300 PF10548 P22AR C-terminal domain E4625_16310 PF12561 ToxR activated gene A lipoprotein domain E4625_16310 PF17945 Beta/Gamma crystallin E4625_16495 PF05772 NinB protein E4625_16540 PF09669 Phage regulatory protein Rha (Phage_pRha) E4625_16540 PF03374 Phage antirepressor protein KilAC domain E4625_16565 PF09669 Phage regulatory protein Rha (Phage_pRha) E4625_16565 PF10549 ORF11CD3 domain E4625_16580 PF06630 Enterobacterial exodeoxyribonuclease VIII E4625_16580 PF12684 PDDEXK-like domain of unknown function (DUF3799) E4625_16620 PF04381 Putative exonuclease, RdgC E4625_16675 PF00589 Phage integrase family E4625_16675 PF02899 Phage integrase, N-terminal SAM-like domain E4625_16680 PF14338 Mrr N-terminal domain E4625_16680 PF04471 Restriction endonuclease E4625_16685 PF00271 Helicase conserved C-terminal domain E4625_16685 PF04851 Type III restriction enzyme, res subunit E4625_16685 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) E4625_16685 PF08463 EcoEI R protein C-terminal E4625_16690 PF02384 N-6 DNA Methylase E4625_16700 PF04320 Protein with unknown function (DUF469) E4625_16710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_16710 PF03466 LysR substrate binding domain E4625_16715 PF02447 GntP family permease E4625_16720 PF00291 Pyridoxal-phosphate dependent enzyme E4625_16730 PF00180 Isocitrate/isopropylmalate dehydrogenase E4625_16735 PF12833 Helix-turn-helix domain E4625_16740 PF01238 Phosphomannose isomerase type I E4625_16765 PF01695 IstB-like ATP binding protein E4625_16770 PF00665 Integrase core domain E4625_16770 PF02796 Helix-turn-helix domain of resolvase E4625_16780 PF00155 Aminotransferase class I and II E4625_16785 PF00367 phosphotransferase system, EIIB E4625_16785 PF02378 Phosphotransferase system, EIIC E4625_16790 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E4625_16790 PF00356 Bacterial regulatory proteins, lacI family E4625_16805 PF00583 Acetyltransferase (GNAT) family E4625_16825 PF02378 Phosphotransferase system, EIIC E4625_16825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4625_16825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E4625_16830 PF07690 Major Facilitator Superfamily E4625_16835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E4625_16845 PF00849 RNA pseudouridylate synthase E4625_16850 PF00293 NUDIX domain E4625_16860 PF04356 Protein of unknown function (DUF489) E4625_16865 PF00206 Lyase E4625_16865 PF08328 Adenylosuccinate lyase C-terminal E4625_16870 PF08007 Cupin superfamily protein E4625_16875 PF13508 Acetyltransferase (GNAT) domain E4625_16885 PF13417 Glutathione S-transferase, N-terminal domain E4625_16885 PF00043 Glutathione S-transferase, C-terminal domain E4625_16890 PF01243 Pyridoxamine 5'-phosphate oxidase E4625_16890 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region E4625_16905 PF01189 16S rRNA methyltransferase RsmB/F E4625_16905 PF01029 NusB family E4625_16910 PF00462 Glutaredoxin E4625_16915 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E4625_16915 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E4625_16920 PF04333 MlaA lipoprotein E4625_16925 PF03918 Cytochrome C biogenesis protein E4625_16930 PF03918 Cytochrome C biogenesis protein E4625_16935 PF08534 Redoxin E4625_16940 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal E4625_16940 PF01578 Cytochrome C assembly protein E4625_16945 PF03100 CcmE E4625_16950 PF04995 Heme exporter protein D (CcmD) E4625_16955 PF01578 Cytochrome C assembly protein E4625_16960 PF03379 CcmB protein E4625_16965 PF00005 ABC transporter E4625_16975 PF01584 CheW-like domain E4625_16985 PF13614 AAA domain E4625_16990 PF13677 Membrane MotB of proton-channel complex MotA/MotB E4625_16990 PF00691 OmpA family E4625_16995 PF01618 MotA/TolQ/ExbB proton channel family E4625_17000 PF01339 CheB methylesterase E4625_17000 PF00072 Response regulator receiver domain E4625_17005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_17005 PF01627 Hpt domain E4625_17005 PF01584 CheW-like domain E4625_17005 PF02895 Signal transducing histidine kinase, homodimeric domain E4625_17005 PF07194 P2 response regulator binding domain E4625_17010 PF04344 Chemotaxis phosphatase, CheZ E4625_17015 PF00072 Response regulator receiver domain E4625_17020 PF04545 Sigma-70, region 4 E4625_17020 PF04539 Sigma-70 region 3 E4625_17020 PF04542 Sigma-70 region 2 E4625_17025 PF10609 NUBPL iron-transfer P-loop NTPase E4625_17030 PF00448 SRP54-type protein, GTPase domain E4625_17035 PF00771 FHIPEP family E4625_17040 PF01312 FlhB HrpN YscU SpaS Family E4625_17045 PF01311 Bacterial export proteins, family 1 E4625_17050 PF01313 Bacterial export proteins, family 3 E4625_17055 PF00813 FliP family E4625_17060 PF04347 Flagellar biosynthesis protein, FliO E4625_17065 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4625_17070 PF02154 Flagellar motor switch protein FliM E4625_17070 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4625_17090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4625_17090 PF18269 T3SS EscN ATPase C-terminal domain E4625_17100 PF14842 FliG N-terminal domain E4625_17100 PF01706 FliG C-terminal domain E4625_17100 PF14841 FliG middle domain E4625_17105 PF08345 Flagellar M-ring protein C-terminal E4625_17105 PF01514 Secretory protein of YscJ/FliF family E4625_17110 PF02049 Flagellar hook-basal body complex protein FliE E4625_17120 PF00072 Response regulator receiver domain E4625_17125 PF18693 TRAM domain E4625_17125 PF04055 Radical SAM superfamily E4625_17125 PF00919 Uncharacterized protein family UPF0004 E4625_17140 PF02794 RTX toxin acyltransferase family E4625_17150 PF03412 Peptidase C39 family E4625_17150 PF00664 ABC transporter transmembrane region E4625_17150 PF00005 ABC transporter E4625_17160 PF00664 ABC transporter transmembrane region E4625_17160 PF00005 ABC transporter E4625_17160 PF03412 Peptidase C39 family E4625_17165 PF00486 Transcriptional regulatory protein, C terminal E4625_17165 PF00072 Response regulator receiver domain E4625_17175 PF02685 Glucokinase E4625_17180 PF01418 Helix-turn-helix domain, rpiR family E4625_17180 PF01380 SIS domain E4625_17185 PF00224 Pyruvate kinase, barrel domain E4625_17185 PF02887 Pyruvate kinase, alpha/beta domain E4625_17195 PF00873 AcrB/AcrD/AcrF family E4625_17200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E4625_17200 PF02770 Acyl-CoA dehydrogenase, middle domain E4625_17200 PF09317 Domain of unknown function (DUF1974) E4625_17200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E4625_17205 PF00440 Bacterial regulatory proteins, tetR family E4625_17260 PF00384 Molybdopterin oxidoreductase E4625_17265 PF02634 FdhD/NarQ family E4625_17270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_17270 PF03466 LysR substrate binding domain E4625_17290 PF00936 BMC domain E4625_17295 PF00936 BMC domain E4625_17300 PF00936 BMC domain E4625_17305 PF00465 Iron-containing alcohol dehydrogenase E4625_17305 PF00171 Aldehyde dehydrogenase family E4625_17315 PF00465 Iron-containing alcohol dehydrogenase E4625_17315 PF00171 Aldehyde dehydrogenase family E4625_17320 PF01228 Glycine radical E4625_17320 PF02901 Pyruvate formate lyase-like E4625_17325 PF04055 Radical SAM superfamily E4625_17325 PF13187 4Fe-4S dicluster domain E4625_17330 PF00936 BMC domain E4625_17335 PF06130 Phosphate propanoyltransferase E4625_17345 PF00893 Small Multidrug Resistance protein E4625_17350 PF00893 Small Multidrug Resistance protein E4625_17355 PF03466 LysR substrate binding domain E4625_17355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_17360 PF12146 Serine aminopeptidase, S33 E4625_17365 PF00326 Prolyl oligopeptidase family E4625_17365 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region E4625_17365 PF07676 WD40-like Beta Propeller Repeat E4625_17395 PF00665 Integrase core domain E4625_17395 PF02796 Helix-turn-helix domain of resolvase E4625_17415 PF09264 Vibrio cholerae sialidase, lectin insertion E4625_17415 PF13088 BNR repeat-like domain E4625_17420 PF04074 YhcH/YjgK/YiaL E4625_17425 PF00474 Sodium:solute symporter family E4625_17430 PF00480 ROK family E4625_17435 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase E4625_17440 PF01418 Helix-turn-helix domain, rpiR family E4625_17440 PF01380 SIS domain E4625_17445 PF00701 Dihydrodipicolinate synthetase family E4625_17450 PF00141 Peroxidase E4625_17455 PF08220 DeoR-like helix-turn-helix domain E4625_17455 PF00455 DeoR C terminal sensor domain E4625_17460 PF07690 Major Facilitator Superfamily E4625_17465 PF07881 L-fucose isomerase, first N-terminal domain E4625_17465 PF07882 L-fucose isomerase, second N-terminal domain E4625_17465 PF02952 L-fucose isomerase, C-terminal domain E4625_17470 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4625_17470 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4625_17480 PF05025 RbsD / FucU transport protein family E4625_17485 PF00465 Iron-containing alcohol dehydrogenase E4625_17490 PF00005 ABC transporter E4625_17490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4625_17495 PF12911 N-terminal TM domain of oligopeptide transport permease C E4625_17495 PF00528 Binding-protein-dependent transport system inner membrane component E4625_17500 PF00528 Binding-protein-dependent transport system inner membrane component E4625_17505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4625_17525 PF01476 LysM domain E4625_17525 PF17969 L,D-transpeptidase C-terminal domain E4625_17525 PF03734 L,D-transpeptidase catalytic domain E4625_17540 PF05971 RNA methyltransferase E4625_17545 PF00877 NlpC/P60 family E4625_17550 PF01648 4'-phosphopantetheinyl transferase superfamily E4625_17555 PF00085 Thioredoxin E4625_17565 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase E4625_17570 PF00551 Formyl transferase E4625_17570 PF01842 ACT domain E4625_17580 PF13396 Phospholipase_D-nuclease N-terminal E4625_17580 PF13091 PLD-like domain E4625_17595 PF01551 Peptidase family M23 E4625_17600 PF00128 Alpha amylase, catalytic domain E4625_17605 PF01551 Peptidase family M23 E4625_17605 PF10145 Phage-related minor tail protein E4625_17605 PF01464 Transglycosylase SLT domain E4625_17610 PF00230 Major intrinsic protein E4625_17615 PF02075 Crossover junction endodeoxyribonuclease RuvC E4625_17625 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E4625_17645 PF05656 Protein of unknown function (DUF805) E4625_17650 PF12833 Helix-turn-helix domain E4625_17665 PF08497 Radical SAM N-terminal E4625_17665 PF04055 Radical SAM superfamily E4625_17665 PF11842 Domain of unknown function (DUF3362) E4625_17675 PF00873 AcrB/AcrD/AcrF family E4625_17680 PF00529 HlyD membrane-fusion protein of T1SS E4625_17680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4625_17685 PF00990 Diguanylate cyclase, GGDEF domain E4625_17690 PF01734 Patatin-like phospholipase E4625_17695 PF00209 Sodium:neurotransmitter symporter family E4625_17710 PF00691 OmpA family E4625_17710 PF01389 OmpA-like transmembrane domain E4625_17715 PF01389 OmpA-like transmembrane domain E4625_17715 PF00691 OmpA family E4625_17720 PF01389 OmpA-like transmembrane domain E4625_17720 PF00691 OmpA family E4625_17725 PF03949 Malic enzyme, NAD binding domain E4625_17725 PF00390 Malic enzyme, N-terminal domain E4625_17730 PF12833 Helix-turn-helix domain E4625_17735 PF01554 MatE E4625_17740 PF10692 Protein of unknown function (DUF2498) E4625_17745 PF00072 Response regulator receiver domain E4625_17745 PF00990 Diguanylate cyclase, GGDEF domain E4625_17750 PF00860 Permease family E4625_17760 PF01235 Sodium:alanine symporter family E4625_17765 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E4625_17765 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E4625_17770 PF01699 Sodium/calcium exchanger protein E4625_17775 PF08534 Redoxin E4625_17785 PF00293 NUDIX domain E4625_17805 PF00005 ABC transporter E4625_17810 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4625_17810 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E4625_17820 PF03932 CutC family E4625_17825 PF00480 ROK family E4625_17835 PF01435 Peptidase family M48 E4625_17840 PF12849 PBP superfamily domain E4625_17845 PF00989 PAS fold E4625_17845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_17845 PF00512 His Kinase A (phospho-acceptor) domain E4625_17845 PF11808 Phosphate regulon sensor protein PhoR E4625_17850 PF00072 Response regulator receiver domain E4625_17850 PF00486 Transcriptional regulatory protein, C terminal E4625_17855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4625_17860 PF02515 CoA-transferase family III E4625_17865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E4625_17865 PF02770 Acyl-CoA dehydrogenase, middle domain E4625_17865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E4625_17870 PF00158 Sigma-54 interaction domain E4625_17870 PF01590 GAF domain E4625_17870 PF02954 Bacterial regulatory protein, Fis family E4625_17875 PF00171 Aldehyde dehydrogenase family E4625_17885 PF00892 EamA-like transporter family E4625_17890 PF00072 Response regulator receiver domain E4625_17890 PF12431 Transcriptional regulator E4625_17895 PF00989 PAS fold E4625_17895 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain E4625_17895 PF17203 Single cache domain 3 E4625_17895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_17900 PF03949 Malic enzyme, NAD binding domain E4625_17900 PF00390 Malic enzyme, N-terminal domain E4625_17915 PF01047 MarR family E4625_17920 PF00529 HlyD membrane-fusion protein of T1SS E4625_17920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4625_17945 PF01679 Proteolipid membrane potential modulator E4625_17955 PF13597 Anaerobic ribonucleoside-triphosphate reductase E4625_17955 PF03477 ATP cone domain E4625_17965 PF03120 NAD-dependent DNA ligase OB-fold domain E4625_17965 PF00533 BRCA1 C Terminus (BRCT) domain E4625_17965 PF12826 Helix-hairpin-helix motif E4625_17965 PF03119 NAD-dependent DNA ligase C4 zinc finger domain E4625_17965 PF01653 NAD-dependent DNA ligase adenylation domain E4625_17970 PF04354 ZipA, C-terminal FtsZ-binding domain E4625_17975 PF06470 SMC proteins Flexible Hinge Domain E4625_17975 PF02463 RecF/RecN/SMC N terminal domain E4625_17985 PF03458 UPF0126 domain E4625_17995 PF05951 Bacterial protein of unknown function (DUF882) E4625_18000 PF03734 L,D-transpeptidase catalytic domain E4625_18000 PF01471 Putative peptidoglycan binding domain E4625_18015 PF00535 Glycosyl transferase family 2 E4625_18030 PF00128 Alpha amylase, catalytic domain E4625_18040 PF00196 Bacterial regulatory proteins, luxR family E4625_18040 PF00072 Response regulator receiver domain E4625_18065 PF02080 TrkA-C domain E4625_18065 PF02254 TrkA-N domain E4625_18065 PF00999 Sodium/hydrogen exchanger family E4625_18070 PF00990 Diguanylate cyclase, GGDEF domain E4625_18075 PF11734 TilS substrate C-terminal domain E4625_18075 PF01171 PP-loop family E4625_18075 PF09179 TilS substrate binding domain E4625_18080 PF05649 Peptidase family M13 E4625_18080 PF01431 Peptidase family M13 E4625_18090 PF00005 ABC transporter E4625_18090 PF12848 ABC transporter E4625_18090 PF16326 ABC transporter C-terminal domain E4625_18095 PF13302 Acetyltransferase (GNAT) domain E4625_18100 PF13520 Amino acid permease E4625_18105 PF03466 LysR substrate binding domain E4625_18105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_18110 PF12706 Beta-lactamase superfamily domain E4625_18120 PF03466 LysR substrate binding domain E4625_18120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_18130 PF08543 Phosphomethylpyrimidine kinase E4625_18135 PF01276 Orn/Lys/Arg decarboxylase, major domain E4625_18135 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain E4625_18135 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain E4625_18140 PF13520 Amino acid permease E4625_18150 PF00486 Transcriptional regulatory protein, C terminal E4625_18150 PF18500 CadC C-terminal domain 1 E4625_18160 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit E4625_18165 PF07733 Bacterial DNA polymerase III alpha NTPase domain E4625_18165 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E4625_18165 PF14579 Helix-hairpin-helix motif E4625_18165 PF02811 PHP domain E4625_18165 PF01336 OB-fold nucleic acid binding domain E4625_18170 PF01351 Ribonuclease HII E4625_18175 PF02684 Lipid-A-disaccharide synthetase E4625_18180 PF00132 Bacterial transferase hexapeptide (six repeats) E4625_18180 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 E4625_18185 PF07977 FabA-like domain E4625_18190 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD E4625_18190 PF00132 Bacterial transferase hexapeptide (six repeats) E4625_18195 PF03938 Outer membrane protein (OmpH-like) E4625_18200 PF01103 Surface antigen E4625_18200 PF07244 Surface antigen variable number repeat E4625_18205 PF17820 PDZ domain E4625_18205 PF02163 Peptidase family M50 E4625_18210 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain E4625_18210 PF13288 DXP reductoisomerase C-terminal domain E4625_18210 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase E4625_18220 PF01255 Putative undecaprenyl diphosphate synthase E4625_18225 PF01765 Ribosome recycling factor E4625_18230 PF00696 Amino acid kinase family E4625_18235 PF00889 Elongation factor TS E4625_18240 PF00318 Ribosomal protein S2 E4625_18245 PF00557 Metallopeptidase family M24 E4625_18250 PF01966 HD domain E4625_18250 PF08335 GlnD PII-uridylyltransferase E4625_18250 PF01842 ACT domain E4625_18250 PF01909 Nucleotidyltransferase domain E4625_18255 PF00132 Bacterial transferase hexapeptide (six repeats) E4625_18255 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal E4625_18255 PF14602 Hexapeptide repeat of succinyl-transferase E4625_18260 PF11944 Protein of unknown function (DUF3461) E4625_18265 PF02378 Phosphotransferase system, EIIC E4625_18265 PF00367 phosphotransferase system, EIIB E4625_18270 PF07148 Maltose operon periplasmic protein precursor (MalM) E4625_18275 PF02264 LamB porin E4625_18280 PF00258 Flavodoxin E4625_18285 PF00849 RNA pseudouridylate synthase E4625_18290 PF04287 tRNA pseudouridine synthase C E4625_18315 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) E4625_18320 PF07348 Syd protein (SUKH-2) E4625_18325 PF14489 QueF-like protein E4625_18325 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term E4625_18335 PF00990 Diguanylate cyclase, GGDEF domain E4625_18335 PF07694 5TMR of 5TMR-LYT E4625_18340 PF11892 Domain of unknown function (DUF3412) E4625_18340 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases E4625_18340 PF03641 Possible lysine decarboxylase E4625_18345 PF01367 5'-3' exonuclease, C-terminal SAM fold E4625_18345 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E4625_18350 PF00180 Isocitrate/isopropylmalate dehydrogenase E4625_18350 PF18324 Hypothetical protein TT1725 E4625_18360 PF01728 FtsJ-like methyltransferase E4625_18360 PF18125 RlmM ferredoxin-like domain E4625_18365 PF04241 Protein of unknown function (DUF423) E4625_18375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_18375 PF03466 LysR substrate binding domain E4625_18380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_18380 PF00672 HAMP domain E4625_18385 PF00817 impB/mucB/samB family E4625_18385 PF11799 impB/mucB/samB family C-terminal domain E4625_18385 PF11798 IMS family HHH motif E4625_18400 PF02424 ApbE family E4625_18405 PF00175 Oxidoreductase NAD-binding domain E4625_18405 PF00111 2Fe-2S iron-sulfur cluster binding domain E4625_18405 PF00970 Oxidoreductase FAD-binding domain E4625_18410 PF02508 Rnf-Nqr subunit, membrane protein E4625_18415 PF02508 Rnf-Nqr subunit, membrane protein E4625_18420 PF04205 FMN-binding domain E4625_18425 PF03116 NQR2, RnfD, RnfE family E4625_18430 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) E4625_18430 PF11973 NQRA C-terminal domain E4625_18435 PF01722 BolA-like protein E4625_18440 PF05175 Methyltransferase small domain E4625_18450 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E4625_18460 PF07690 Major Facilitator Superfamily E4625_18465 PF03502 Nucleoside-specific channel-forming protein, Tsx E4625_18470 PF04461 Protein of unknown function (DUF520) E4625_18475 PF08546 Ketopantoate reductase PanE/ApbA C terminal E4625_18475 PF02558 Ketopantoate reductase PanE/ApbA E4625_18480 PF01965 DJ-1/PfpI family E4625_18485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4625_18485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E4625_18485 PF00205 Thiamine pyrophosphate enzyme, central domain E4625_18490 PF03306 Alpha-acetolactate decarboxylase E4625_18495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_18495 PF03466 LysR substrate binding domain E4625_18520 PF04717 Type VI secretion system, phage-baseplate injector E4625_18530 PF05638 Type VI secretion system effector, Hcp E4625_18535 PF00196 Bacterial regulatory proteins, luxR family E4625_18535 PF03472 Autoinducer binding domain E4625_18555 PF13462 Thioredoxin E4625_18555 PF06965 Na+/H+ antiporter 1 E4625_18560 PF16363 GDP-mannose 4,6 dehydratase E4625_18565 PF00970 Oxidoreductase FAD-binding domain E4625_18565 PF00042 Globin E4625_18565 PF00175 Oxidoreductase NAD-binding domain E4625_18570 PF03063 Prismane/CO dehydrogenase family E4625_18575 PF00210 Ferritin-like domain E4625_18615 PF00106 short chain dehydrogenase E4625_18625 PF00875 DNA photolyase E4625_18625 PF03441 FAD binding domain of DNA photolyase E4625_18630 PF13411 MerR HTH family regulatory protein E4625_18635 PF08349 Protein of unknown function (DUF1722) E4625_18665 PF01817 Chorismate mutase type II E4625_18665 PF00800 Prephenate dehydratase E4625_18695 PF18500 CadC C-terminal domain 1 E4625_18695 PF00486 Transcriptional regulatory protein, C terminal E4625_18710 PF00563 EAL domain E4625_18710 PF08447 PAS fold E4625_18710 PF08448 PAS fold E4625_18710 PF00990 Diguanylate cyclase, GGDEF domain E4625_18730 PF09134 Invasin, domain 3 E4625_18730 PF11924 Inverse autotransporter, beta-domain E4625_18730 PF02369 Bacterial Ig-like domain (group 1) E4625_18735 PF13195 Protein of unknown function (DUF4011) E4625_18735 PF13086 AAA domain E4625_18735 PF13087 AAA domain E4625_18740 PF08220 DeoR-like helix-turn-helix domain E4625_18740 PF00455 DeoR C terminal sensor domain E4625_18745 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E4625_18745 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E4625_18750 PF17042 Nucleotide-binding C-terminal domain E4625_18750 PF07005 Sugar-binding N-terminal domain E4625_18755 PF00596 Class II Aldolase and Adducin N-terminal domain E4625_18760 PF01261 Xylose isomerase-like TIM barrel E4625_18765 PF01370 NAD dependent epimerase/dehydratase family E4625_18770 PF02447 GntP family permease E4625_18780 PF02743 Cache domain E4625_18780 PF00672 HAMP domain E4625_18780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_18785 PF03573 outer membrane porin, OprD family E4625_18790 PF00106 short chain dehydrogenase E4625_18815 PF02074 Carboxypeptidase Taq (M32) metallopeptidase E4625_18825 PF12833 Helix-turn-helix domain E4625_18825 PF00730 HhH-GPD superfamily base excision DNA repair protein E4625_18825 PF06029 AlkA N-terminal domain E4625_18825 PF02805 Metal binding domain of Ada E4625_18830 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E4625_18830 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E4625_18840 PF01136 Peptidase family U32 E4625_18840 PF12392 Collagenase E4625_18845 PF01810 LysE type translocator E4625_18850 PF03466 LysR substrate binding domain E4625_18850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_18860 PF02743 Cache domain E4625_18860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_18860 PF00672 HAMP domain E4625_18865 PF00072 Response regulator receiver domain E4625_18875 PF09078 CheY binding E4625_18875 PF02895 Signal transducing histidine kinase, homodimeric domain E4625_18875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_18875 PF01584 CheW-like domain E4625_18875 PF01627 Hpt domain E4625_18880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_18880 PF00672 HAMP domain E4625_18880 PF12729 Four helix bundle sensory module for signal transduction E4625_18885 PF01584 CheW-like domain E4625_18890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_18890 PF02203 Tar ligand binding domain homologue E4625_18890 PF00672 HAMP domain E4625_18895 PF03705 CheR methyltransferase, all-alpha domain E4625_18895 PF01739 CheR methyltransferase, SAM binding domain E4625_18900 PF03975 CheD chemotactic sensory transduction E4625_18905 PF01339 CheB methylesterase E4625_18905 PF00072 Response regulator receiver domain E4625_18910 PF00266 Aminotransferase class-V E4625_18935 PF00072 Response regulator receiver domain E4625_18935 PF01627 Hpt domain E4625_18935 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E4625_18935 PF00512 His Kinase A (phospho-acceptor) domain E4625_18935 PF00672 HAMP domain E4625_18935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_18940 PF00196 Bacterial regulatory proteins, luxR family E4625_18940 PF00072 Response regulator receiver domain E4625_18950 PF16967 E-set like domain E4625_18950 PF15976 CS1-pili formation C-terminal E4625_18965 PF00989 PAS fold E4625_18965 PF00563 EAL domain E4625_18965 PF01590 GAF domain E4625_18965 PF00990 Diguanylate cyclase, GGDEF domain E4625_18975 PF12838 4Fe-4S dicluster domain E4625_18985 PF01168 Alanine racemase, N-terminal domain E4625_18985 PF00842 Alanine racemase, C-terminal domain E4625_18990 PF03796 DnaB-like helicase C terminal domain E4625_18990 PF00772 DnaB-like helicase N terminal domain E4625_19005 PF12792 CSS motif domain associated with EAL E4625_19005 PF00563 EAL domain E4625_19010 PF02872 5'-nucleotidase, C-terminal domain E4625_19010 PF00149 Calcineurin-like phosphoesterase E4625_19030 PF00158 Sigma-54 interaction domain E4625_19030 PF00072 Response regulator receiver domain E4625_19030 PF02954 Bacterial regulatory protein, Fis family E4625_19035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4625_19035 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E4625_19045 PF04102 SlyX E4625_19050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4625_19055 PF09526 Probable metal-binding protein (DUF2387) E4625_19065 PF01584 CheW-like domain E4625_19065 PF00072 Response regulator receiver domain E4625_19070 PF00561 alpha/beta hydrolase fold E4625_19075 PF00990 Diguanylate cyclase, GGDEF domain E4625_19075 PF00360 Phytochrome region E4625_19075 PF01590 GAF domain E4625_19075 PF00563 EAL domain E4625_19080 PF06794 Uncharacterised protein family (UPF0270) E4625_19085 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E4625_19085 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E4625_19085 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E4625_19090 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4625_19095 PF00535 Glycosyl transferase family 2 E4625_19100 PF00551 Formyl transferase E4625_19100 PF01370 NAD dependent epimerase/dehydratase family E4625_19100 PF02911 Formyl transferase, C-terminal domain E4625_19105 PF01522 Polysaccharide deacetylase E4625_19110 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase E4625_19115 PF00892 EamA-like transporter family E4625_19120 PF00893 Small Multidrug Resistance protein E4625_19125 PF00485 Phosphoribulokinase / Uridine kinase family E4625_19140 PF02566 OsmC-like protein E4625_19145 PF00027 Cyclic nucleotide-binding domain E4625_19145 PF13545 Crp-like helix-turn-helix domain E4625_19150 PF13847 Methyltransferase domain E4625_19160 PF18416 N-acetylglucosamine binding protein domain 2 E4625_19160 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading E4625_19165 PF17945 Beta/Gamma crystallin E4625_19165 PF12561 ToxR activated gene A lipoprotein domain E4625_19170 PF00704 Glycosyl hydrolases family 18 E4625_19170 PF08329 Chitinase A, N-terminal domain E4625_19175 PF00512 His Kinase A (phospho-acceptor) domain E4625_19175 PF00989 PAS fold E4625_19175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_19185 PF13443 Cro/C1-type HTH DNA-binding domain E4625_19190 PF12832 MFS_1 like family E4625_19200 PF00593 TonB dependent receptor E4625_19200 PF07715 TonB-dependent Receptor Plug Domain E4625_19220 PF01243 Pyridoxamine 5'-phosphate oxidase E4625_19225 PF06228 Haem utilisation ChuX/HutX E4625_19235 PF01032 FecCD transport family E4625_19240 PF00005 ABC transporter E4625_19250 PF01370 NAD dependent epimerase/dehydratase family E4625_19260 PF01791 DeoC/LacD family aldolase E4625_19265 PF07662 Na+ dependent nucleoside transporter C-terminus E4625_19265 PF07670 Nucleoside recognition E4625_19265 PF01773 Na+ dependent nucleoside transporter N-terminus E4625_19270 PF01048 Phosphorylase superfamily E4625_19275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_19275 PF03466 LysR substrate binding domain E4625_19290 PF01464 Transglycosylase SLT domain E4625_19295 PF01048 Phosphorylase superfamily E4625_19310 PF12848 ABC transporter E4625_19310 PF00005 ABC transporter E4625_19320 PF00860 Permease family E4625_19325 PF00226 DnaJ domain E4625_19325 PF05099 Tellurite resistance protein TerB E4625_19330 PF00483 Nucleotidyl transferase E4625_19335 PF01636 Phosphotransferase enzyme family E4625_19340 PF03968 OstA-like protein E4625_19340 PF04453 LPS transport system D E4625_19345 PF00639 PPIC-type PPIASE domain E4625_19345 PF09312 SurA N-terminal domain E4625_19350 PF04166 Pyridoxal phosphate biosynthetic protein PdxA E4625_19355 PF00398 Ribosomal RNA adenine dimethylase E4625_19360 PF04379 ApaG domain E4625_19365 PF00149 Calcineurin-like phosphoesterase E4625_19375 PF00296 Luciferase-like monooxygenase E4625_19395 PF00501 AMP-binding enzyme E4625_19395 PF13193 AMP-binding enzyme C-terminal domain E4625_19405 PF01926 50S ribosome-binding GTPase E4625_19405 PF01018 GTP1/OBG E4625_19410 PF01016 Ribosomal L27 protein E4625_19415 PF00829 Ribosomal prokaryotic L21 protein E4625_19420 PF00348 Polyprenyl synthetase E4625_19425 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) E4625_19430 PF01145 SPFH domain / Band 7 family E4625_19435 PF12221 Bacterial membrane protein N terminal E4625_19435 PF01145 SPFH domain / Band 7 family E4625_19440 PF13167 GTP-binding GTPase N-terminal E4625_19440 PF16360 GTP-binding GTPase Middle Region E4625_19440 PF01926 50S ribosome-binding GTPase E4625_19445 PF17209 Hfq protein E4625_19455 PF01119 DNA mismatch repair protein, C-terminal domain E4625_19455 PF08676 MutL C terminal dimerisation domain E4625_19460 PF01520 N-acetylmuramoyl-L-alanine amidase E4625_19465 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE E4625_19470 PF03853 YjeF-related protein N-terminus E4625_19470 PF01256 Carbohydrate kinase E4625_19475 PF08331 Domain of unknown function (DUF1730) E4625_19480 PF00480 ROK family E4625_19490 PF00005 ABC transporter E4625_19490 PF09383 NIL domain E4625_19495 PF00528 Binding-protein-dependent transport system inner membrane component E4625_19500 PF03180 NLPA lipoprotein E4625_19505 PF02357 Transcription termination factor nusG E4625_19510 PF12729 Four helix bundle sensory module for signal transduction E4625_19510 PF00672 HAMP domain E4625_19510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_19515 PF03707 Bacterial signalling protein N terminal repeat E4625_19515 PF00563 EAL domain E4625_19515 PF00990 Diguanylate cyclase, GGDEF domain E4625_19520 PF09456 RcsC Alpha-Beta-Loop (ABL) E4625_19520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_19520 PF00512 His Kinase A (phospho-acceptor) domain E4625_19520 PF00072 Response regulator receiver domain E4625_19530 PF13286 Phosphohydrolase-associated domain E4625_19530 PF01966 HD domain E4625_19535 PF18415 Histidine kinase receptor ArcB trans-membrane domain E4625_19535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_19535 PF01627 Hpt domain E4625_19535 PF00512 His Kinase A (phospho-acceptor) domain E4625_19535 PF00072 Response regulator receiver domain E4625_19535 PF00989 PAS fold E4625_19555 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) E4625_19560 PF03466 LysR substrate binding domain E4625_19560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_19570 PF01259 SAICAR synthetase E4625_19575 PF06804 NlpB/DapX lipoprotein E4625_19580 PF00701 Dihydrodipicolinate synthetase family E4625_19585 PF01842 ACT domain E4625_19590 PF00578 AhpC/TSA family E4625_19595 PF03887 YfbU domain E4625_19600 PF04217 Protein of unknown function, DUF412 E4625_19605 PF00871 Acetokinase family E4625_19610 PF01515 Phosphate acetyl/butaryl transferase E4625_19610 PF07085 DRTGG domain E4625_19615 PF10369 Small subunit of acetolactate synthase E4625_19625 PF00205 Thiamine pyrophosphate enzyme, central domain E4625_19625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4625_19625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E4625_19640 PF01569 PAP2 superfamily E4625_19650 PF00682 HMGL-like E4625_19650 PF08502 LeuA allosteric (dimerisation) domain E4625_19655 PF00180 Isocitrate/isopropylmalate dehydrogenase E4625_19660 PF00330 Aconitase family (aconitate hydratase) E4625_19665 PF00694 Aconitase C-terminal domain E4625_19685 PF00528 Binding-protein-dependent transport system inner membrane component E4625_19690 PF00005 ABC transporter E4625_19695 PF02562 PhoH-like protein E4625_19695 PF13638 PIN domain E4625_19705 PF08343 Ribonucleotide reductase N-terminal E4625_19705 PF00317 Ribonucleotide reductase, all-alpha domain E4625_19705 PF02867 Ribonucleotide reductase, barrel domain E4625_19735 PF00271 Helicase conserved C-terminal domain E4625_19735 PF12137 RNA polymerase recycling family C-terminal E4625_19735 PF00176 SNF2 family N-terminal domain E4625_19735 PF18337 RapA N-terminal Tudor like domain E4625_19735 PF18339 RapA N-terminal Tudor like domain 1 E4625_19740 PF00849 RNA pseudouridylate synthase E4625_19750 PF00563 EAL domain E4625_19750 PF00990 Diguanylate cyclase, GGDEF domain E4625_19750 PF03707 Bacterial signalling protein N terminal repeat E4625_19750 PF13188 PAS domain E4625_19760 PF00118 TCP-1/cpn60 chaperonin family E4625_19765 PF00166 Chaperonin 10 Kd subunit E4625_19770 PF01554 MatE E4625_19775 PF04186 FxsA cytoplasmic membrane protein E4625_19780 PF10415 Fumarase C C-terminus E4625_19780 PF00206 Lyase E4625_19785 PF03605 Anaerobic c4-dicarboxylate membrane transporter E4625_19790 PF00267 Gram-negative porin E4625_19795 PF07690 Major Facilitator Superfamily E4625_19800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_19800 PF03466 LysR substrate binding domain E4625_19805 PF01447 Thermolysin metallopeptidase, catalytic domain E4625_19805 PF02868 Thermolysin metallopeptidase, alpha-helical domain E4625_19805 PF04151 Bacterial pre-peptidase C-terminal domain E4625_19805 PF03413 Peptidase propeptide and YPEB domain E4625_19805 PF07504 Fungalysin/Thermolysin Propeptide Motif E4625_19810 PF13302 Acetyltransferase (GNAT) domain E4625_19815 PF13302 Acetyltransferase (GNAT) domain E4625_19825 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E4625_19825 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E4625_19830 PF07690 Major Facilitator Superfamily E4625_19835 PF01725 Ham1 family E4625_19840 PF06969 HemN C-terminal domain E4625_19840 PF04055 Radical SAM superfamily E4625_19845 PF03889 Alternative ribosome-rescue factor A E4625_19850 PF01872 RibD C-terminal domain E4625_19855 PF13411 MerR HTH family regulatory protein E4625_19860 PF02142 MGS-like domain E4625_19860 PF01808 AICARFT/IMPCHase bienzyme E4625_19865 PF02843 Phosphoribosylglycinamide synthetase, C domain E4625_19865 PF02844 Phosphoribosylglycinamide synthetase, N domain E4625_19865 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E4625_19880 PF00128 Alpha amylase, catalytic domain E4625_19890 PF01548 Transposase E4625_19890 PF02371 Transposase IS116/IS110/IS902 family E4625_19945 PF00665 Integrase core domain E4625_19945 PF02796 Helix-turn-helix domain of resolvase E4625_19950 PF01695 IstB-like ATP binding protein E4625_19965 PF02463 RecF/RecN/SMC N terminal domain E4625_19985 PF04539 Sigma-70 region 3 E4625_19985 PF00140 Sigma-70 factor, region 1.2 E4625_19985 PF04545 Sigma-70, region 4 E4625_19985 PF03979 Sigma-70 factor, region 1.1 E4625_19985 PF04542 Sigma-70 region 2 E4625_19985 PF04546 Sigma-70, non-essential region E4625_19990 PF08275 DNA primase catalytic core, N-terminal domain E4625_19990 PF10410 DnaB-helicase binding domain of primase E4625_19990 PF08278 DNA primase DnaG DnaB-binding E4625_19990 PF01807 CHC2 zinc finger E4625_19995 PF09424 Yqey-like protein E4625_20000 PF01165 Ribosomal protein S21 E4625_20005 PF00814 Glycoprotease family E4625_20010 PF00140 Sigma-70 factor, region 1.2 E4625_20010 PF04542 Sigma-70 region 2 E4625_20010 PF04539 Sigma-70 region 3 E4625_20010 PF04545 Sigma-70, region 4 E4625_20015 PF01551 Peptidase family M23 E4625_20015 PF01476 LysM domain E4625_20020 PF09335 SNARE associated Golgi protein E4625_20030 PF01975 Survival protein SurE E4625_20035 PF01142 tRNA pseudouridine synthase D (TruD) E4625_20040 PF02542 YgbB family E4625_20045 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E4625_20050 PF04977 Septum formation initiator E4625_20055 PF00113 Enolase, C-terminal TIM barrel domain E4625_20055 PF03952 Enolase, N-terminal domain E4625_20060 PF00117 Glutamine amidotransferase class-I E4625_20060 PF06418 CTP synthase N-terminus E4625_20065 PF03819 MazG nucleotide pyrophosphohydrolase domain E4625_20070 PF02824 TGS domain E4625_20070 PF13291 ACT domain E4625_20070 PF04607 Region found in RelA / SpoT proteins E4625_20075 PF05958 tRNA (Uracil-5-)-methyltransferase E4625_20075 PF01938 TRAM domain E4625_20080 PF00072 Response regulator receiver domain E4625_20080 PF01627 Hpt domain E4625_20080 PF00512 His Kinase A (phospho-acceptor) domain E4625_20080 PF00672 HAMP domain E4625_20080 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E4625_20080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_20085 PF07308 Protein of unknown function (DUF1456) E4625_20090 PF01510 N-acetylmuramoyl-L-alanine amidase E4625_20095 PF08220 DeoR-like helix-turn-helix domain E4625_20095 PF00455 DeoR C terminal sensor domain E4625_20100 PF08013 Tagatose 6 phosphate kinase E4625_20105 PF01380 SIS domain E4625_20110 PF03830 PTS system sorbose subfamily IIB component E4625_20115 PF03609 PTS system sorbose-specific iic component E4625_20120 PF03613 PTS system mannose/fructose/sorbose family IID component E4625_20125 PF03610 PTS system fructose IIA component E4625_20130 PF01979 Amidohydrolase family E4625_20135 PF01116 Fructose-bisphosphate aldolase class-II E4625_20145 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ E4625_20150 PF11967 Recombination protein O N terminal E4625_20150 PF02565 Recombination protein O C terminal E4625_20155 PF01926 50S ribosome-binding GTPase E4625_20155 PF07650 KH domain E4625_20160 PF00035 Double-stranded RNA binding motif E4625_20160 PF14622 Ribonuclease-III-like E4625_20165 PF10502 Signal peptidase, peptidase S26 E4625_20170 PF03144 Elongation factor Tu domain 2 E4625_20170 PF00009 Elongation factor Tu GTP binding domain E4625_20170 PF00679 Elongation factor G C-terminus E4625_20170 PF06421 GTP-binding protein LepA C-terminus E4625_20180 PF17188 MucB/RseB C-terminal domain E4625_20180 PF03888 MucB/RseB N-terminal domain E4625_20185 PF03872 Anti sigma-E protein RseA, N-terminal domain E4625_20185 PF03873 Anti sigma-E protein RseA, C-terminal domain E4625_20190 PF08281 Sigma-70, region 4 E4625_20190 PF04542 Sigma-70 region 2 E4625_20195 PF02910 Fumarate reductase flavoprotein C-term E4625_20195 PF00890 FAD binding domain E4625_20205 PF03937 Flavinator of succinate dehydrogenase E4625_20210 PF01571 Aminomethyltransferase folate-binding domain E4625_20215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_20215 PF03466 LysR substrate binding domain E4625_20230 PF03091 CutA1 divalent ion tolerance protein E4625_20235 PF11412 Disulphide bond corrector protein DsbC E4625_20235 PF02683 Cytochrome C biogenesis protein transmembrane region E4625_20245 PF01266 FAD dependent oxidoreductase E4625_20250 PF01116 Fructose-bisphosphate aldolase class-II E4625_20255 PF00162 Phosphoglycerate kinase E4625_20260 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E4625_20260 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E4625_20265 PF00480 ROK family E4625_20270 PF01208 Uroporphyrinogen decarboxylase (URO-D) E4625_20275 PF09297 NADH pyrophosphatase zinc ribbon domain E4625_20275 PF00293 NUDIX domain E4625_20280 PF18327 Proline utilization A proline dehydrogenase N-terminal domain E4625_20280 PF14850 DNA-binding domain of Proline dehydrogenase E4625_20280 PF01619 Proline dehydrogenase E4625_20280 PF00171 Aldehyde dehydrogenase family E4625_20285 PF08239 Bacterial SH3 domain E4625_20290 PF00520 Ion transport protein E4625_20290 PF00027 Cyclic nucleotide-binding domain E4625_20295 PF02743 Cache domain E4625_20295 PF00672 HAMP domain E4625_20295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_20305 PF03710 Glutamate-ammonia ligase adenylyltransferase E4625_20305 PF08335 GlnD PII-uridylyltransferase E4625_20330 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4625_20330 PF00326 Prolyl oligopeptidase family E4625_20335 PF00291 Pyridoxal-phosphate dependent enzyme E4625_20340 PF00528 Binding-protein-dependent transport system inner membrane component E4625_20345 PF00528 Binding-protein-dependent transport system inner membrane component E4625_20350 PF00005 ABC transporter E4625_20355 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4625_20360 PF00005 ABC transporter E4625_20360 PF02687 FtsX-like permease family E4625_20360 PF12704 MacB-like periplasmic core domain E4625_20365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4625_20370 PF00486 Transcriptional regulatory protein, C terminal E4625_20370 PF00072 Response regulator receiver domain E4625_20375 PF16527 Two-component sensor protein CpxA, periplasmic domain E4625_20375 PF00512 His Kinase A (phospho-acceptor) domain E4625_20375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_20375 PF00672 HAMP domain E4625_20380 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain E4625_20380 PF09297 NADH pyrophosphatase zinc ribbon domain E4625_20380 PF00293 NUDIX domain E4625_20415 PF03060 Nitronate monooxygenase E4625_20425 PF00445 Ribonuclease T2 family E4625_20440 PF00034 Cytochrome c E4625_20440 PF03150 Di-haem cytochrome c peroxidase E4625_20445 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase E4625_20460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_20460 PF03466 LysR substrate binding domain E4625_20465 PF00270 DEAD/DEAH box helicase E4625_20465 PF00271 Helicase conserved C-terminal domain E4625_20475 PF00753 Metallo-beta-lactamase superfamily E4625_20485 PF01425 Amidase E4625_20490 PF04371 Porphyromonas-type peptidyl-arginine deiminase E4625_20495 PF03466 LysR substrate binding domain E4625_20495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_20505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4625_20510 PF00583 Acetyltransferase (GNAT) family E4625_20530 PF00009 Elongation factor Tu GTP binding domain E4625_20530 PF03144 Elongation factor Tu domain 2 E4625_20530 PF16658 Class II release factor RF3, C-terminal domain E4625_20535 PF00072 Response regulator receiver domain E4625_20535 PF00990 Diguanylate cyclase, GGDEF domain E4625_20545 PF00563 EAL domain E4625_20545 PF00990 Diguanylate cyclase, GGDEF domain E4625_20545 PF03707 Bacterial signalling protein N terminal repeat E4625_20545 PF13188 PAS domain E4625_20550 PF05762 VWA domain containing CoxE-like protein E4625_20555 PF17868 AAA lid domain E4625_20555 PF07728 AAA domain (dynein-related subfamily) E4625_20555 PF12592 Protein of unknown function (DUF3763) E4625_20565 PF00583 Acetyltransferase (GNAT) family E4625_20575 PF00501 AMP-binding enzyme E4625_20585 PF04262 Glutamate-cysteine ligase E4625_20590 PF05193 Peptidase M16 inactive domain E4625_20590 PF00675 Insulinase (Peptidase family M16) E4625_20595 PF09335 SNARE associated Golgi protein E4625_20600 PF00698 Acyl transferase domain E4625_20600 PF08240 Alcohol dehydrogenase GroES-like domain E4625_20600 PF08990 Erythronolide synthase docking E4625_20600 PF02801 Beta-ketoacyl synthase, C-terminal domain E4625_20600 PF16197 Ketoacyl-synthetase C-terminal extension E4625_20600 PF08659 KR domain E4625_20600 PF00550 Phosphopantetheine attachment site E4625_20600 PF00109 Beta-ketoacyl synthase, N-terminal domain E4625_20600 PF14765 Polyketide synthase dehydratase E4625_20620 PF00175 Oxidoreductase NAD-binding domain E4625_20620 PF00970 Oxidoreductase FAD-binding domain E4625_20625 PF03948 Ribosomal protein L9, C-terminal domain E4625_20625 PF01281 Ribosomal protein L9, N-terminal domain E4625_20630 PF01084 Ribosomal protein S18 E4625_20635 PF01250 Ribosomal protein S6 E4625_20640 PF01566 Natural resistance-associated macrophage protein E4625_20660 PF13673 Acetyltransferase (GNAT) domain E4625_20670 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4625_20670 PF00588 SpoU rRNA Methylase family E4625_20675 PF08461 Ribonuclease R winged-helix domain E4625_20675 PF17876 Cold shock domain E4625_20675 PF00773 RNB domain E4625_20675 PF00575 S1 RNA binding domain E4625_20675 PF08206 Ribonuclease B OB domain E4625_20680 PF00990 Diguanylate cyclase, GGDEF domain E4625_20685 PF02664 S-Ribosylhomocysteinase (LuxS) E4625_20695 PF00543 Nitrogen regulatory protein P-II E4625_20700 PF00795 Carbon-nitrogen hydrolase E4625_20700 PF02540 NAD synthase E4625_20730 PF00114 Pilin (bacterial filament) E4625_20730 PF07963 Prokaryotic N-terminal methylation motif E4625_20735 PF05567 Neisseria PilC beta-propeller domain E4625_20760 PF02401 LytB protein E4625_20765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4625_20770 PF01252 Signal peptidase (SPase) II E4625_20775 PF06827 Zinc finger found in FPG and IleRS E4625_20775 PF08264 Anticodon-binding domain of tRNA E4625_20775 PF00133 tRNA synthetases class I (I, L, M and V) E4625_20780 PF01687 Riboflavin kinase E4625_20780 PF06574 FAD synthetase E4625_20785 PF03023 Lipid II flippase MurJ E4625_20790 PF01649 Ribosomal protein S20 E4625_20795 PF01022 Bacterial regulatory protein, arsR family E4625_20800 PF03466 LysR substrate binding domain E4625_20800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_20810 PF06965 Na+/H+ antiporter 1 E4625_20815 PF00303 Thymidylate synthase E4625_20820 PF01790 Prolipoprotein diacylglyceryl transferase E4625_20825 PF02896 PEP-utilising enzyme, TIM barrel domain E4625_20825 PF00391 PEP-utilising enzyme, mobile domain E4625_20825 PF05524 PEP-utilising enzyme, N-terminal E4625_20825 PF01590 GAF domain E4625_20830 PF00293 NUDIX domain E4625_20835 PF02976 DNA mismatch repair enzyme MutH E4625_20845 PF01245 Ribosomal protein L19 E4625_20850 PF01746 tRNA (Guanine-1)-methyltransferase E4625_20855 PF05239 PRC-barrel domain E4625_20855 PF01782 RimM N-terminal domain E4625_20860 PF00886 Ribosomal protein S16 E4625_20865 PF02978 Signal peptide binding domain E4625_20865 PF02881 SRP54-type protein, helical bundle domain E4625_20865 PF00448 SRP54-type protein, GTPase domain E4625_20870 PF01578 Cytochrome C assembly protein E4625_20875 PF00571 CBS domain E4625_20875 PF03471 Transporter associated domain E4625_20875 PF01595 Cyclin M transmembrane N-terminal domain E4625_20880 PF02082 Transcriptional regulator E4625_20885 PF00970 Oxidoreductase FAD-binding domain E4625_20885 PF00175 Oxidoreductase NAD-binding domain E4625_20885 PF00042 Globin E4625_20890 PF08238 Sel1 repeat E4625_20895 PF00056 lactate/malate dehydrogenase, NAD binding domain E4625_20895 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain E4625_20900 PF00528 Binding-protein-dependent transport system inner membrane component E4625_20905 PF00528 Binding-protein-dependent transport system inner membrane component E4625_20910 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4625_20915 PF00005 ABC transporter E4625_20920 PF01316 Arginine repressor, DNA binding domain E4625_20920 PF02863 Arginine repressor, C-terminal domain E4625_20925 PF04261 Dyp-type peroxidase family E4625_20930 PF08402 TOBE domain E4625_20930 PF00005 ABC transporter E4625_20940 PF13416 Bacterial extracellular solute-binding protein E4625_20945 PF00543 Nitrogen regulatory protein P-II E4625_20950 PF00472 RF-1 domain E4625_20955 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E4625_20955 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E4625_20960 PF07670 Nucleoside recognition E4625_20960 PF01773 Na+ dependent nucleoside transporter N-terminus E4625_20960 PF07662 Na+ dependent nucleoside transporter C-terminus E4625_20965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_20965 PF03466 LysR substrate binding domain E4625_20970 PF00255 Glutathione peroxidase E4625_20980 PF02595 Glycerate kinase family E4625_20985 PF02447 GntP family permease E4625_20990 PF13556 PucR C-terminal helix-turn-helix domain E4625_20990 PF17853 GGDEF-like domain E4625_20990 PF05651 Putative sugar diacid recognition E4625_21000 PF06062 Uncharacterised protein family (UPF0231) E4625_21015 PF08447 PAS fold E4625_21015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_21020 PF03372 Endonuclease/Exonuclease/phosphatase family E4625_21035 PF00270 DEAD/DEAH box helicase E4625_21035 PF00271 Helicase conserved C-terminal domain E4625_21045 PF08534 Redoxin E4625_21050 PF00403 Heavy-metal-associated domain E4625_21055 PF17967 Pullulanase N2 domain E4625_21055 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E4625_21055 PF18494 Pullulanase Ins domain E4625_21055 PF11852 Domain of unknown function (DUF3372) E4625_21055 PF03714 Bacterial pullanase-associated domain E4625_21070 PF02583 Metal-sensitive transcriptional repressor E4625_21075 PF00155 Aminotransferase class I and II E4625_21080 PF03466 LysR substrate binding domain E4625_21080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_21090 PF04055 Radical SAM superfamily E4625_21095 PF11230 Protein of unknown function (DUF3029) E4625_21115 PF03572 Peptidase family S41 E4625_21115 PF14685 Tricorn protease PDZ domain E4625_21115 PF14684 Tricorn protease C1 domain E4625_21115 PF07676 WD40-like Beta Propeller Repeat E4625_21145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_21145 PF00672 HAMP domain E4625_21145 PF12729 Four helix bundle sensory module for signal transduction E4625_21150 PF18416 N-acetylglucosamine binding protein domain 2 E4625_21150 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading E4625_21155 PF03466 LysR substrate binding domain E4625_21155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_21160 PF12857 TOBE-like domain E4625_21160 PF00005 ABC transporter E4625_21165 PF00528 Binding-protein-dependent transport system inner membrane component E4625_21170 PF00528 Binding-protein-dependent transport system inner membrane component E4625_21185 PF13194 Domain of unknown function (DUF4010) E4625_21190 PF12464 Maltose acetyltransferase E4625_21190 PF14602 Hexapeptide repeat of succinyl-transferase E4625_21215 PF14698 Argininosuccinate lyase C-terminal E4625_21215 PF00206 Lyase E4625_21220 PF00764 Arginosuccinate synthase E4625_21225 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4625_21225 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4625_21230 PF00696 Amino acid kinase family E4625_21235 PF01118 Semialdehyde dehydrogenase, NAD binding domain E4625_21235 PF02774 Semialdehyde dehydrogenase, dimerisation domain E4625_21240 PF01546 Peptidase family M20/M25/M40 E4625_21240 PF07687 Peptidase dimerisation domain E4625_21245 PF00311 Phosphoenolpyruvate carboxylase E4625_21250 PF01734 Patatin-like phospholipase E4625_21260 PF05717 IS66 Orf2 like protein E4625_21265 PF13007 Transposase C of IS166 homeodomain E4625_21265 PF03050 Transposase IS66 family E4625_21265 PF13817 IS66 C-terminal element E4625_21265 PF13005 zinc-finger binding domain of transposase IS66 E4625_21280 PF00742 Homoserine dehydrogenase E4625_21280 PF03447 Homoserine dehydrogenase, NAD binding domain E4625_21280 PF00696 Amino acid kinase family E4625_21285 PF01053 Cys/Met metabolism PLP-dependent enzyme E4625_21290 PF01340 Met Apo-repressor, MetJ E4625_21295 PF06445 GyrI-like small molecule binding domain E4625_21295 PF12833 Helix-turn-helix domain E4625_21300 PF01588 Putative tRNA binding domain E4625_21305 PF03222 Tryptophan/tyrosine permease family E4625_21310 PF00459 Inositol monophosphatase family E4625_21315 PF00293 NUDIX domain E4625_21320 PF13419 Haloacid dehalogenase-like hydrolase E4625_21325 PF01479 S4 domain E4625_21325 PF00579 tRNA synthetases class I (W and Y) E4625_21330 PF00196 Bacterial regulatory proteins, luxR family E4625_21335 PF01203 Type II secretion system (T2SS), protein N E4625_21340 PF04612 Type II secretion system (T2SS), protein M E4625_21345 PF12693 GspL periplasmic domain E4625_21345 PF05134 Type II secretion system (T2SS), protein L E4625_21350 PF03934 Type II secretion system (T2SS), protein K E4625_21360 PF07963 Prokaryotic N-terminal methylation motif E4625_21360 PF11612 Type II secretion system (T2SS), protein J E4625_21365 PF02501 Type II secretion system (T2SS), protein I E4625_21365 PF07963 Prokaryotic N-terminal methylation motif E4625_21370 PF12019 Type II transport protein GspH E4625_21370 PF07963 Prokaryotic N-terminal methylation motif E4625_21380 PF07963 Prokaryotic N-terminal methylation motif E4625_21380 PF08334 Type II secretion system (T2SS), protein G E4625_21385 PF00482 Type II secretion system (T2SS), protein F E4625_21390 PF00437 Type II/IV secretion system protein E4625_21395 PF03958 Bacterial type II/III secretion system short domain E4625_21395 PF00263 Bacterial type II and III secretion system protein E4625_21400 PF11356 Type II secretion system protein C E4625_21405 PF01479 S4 domain E4625_21410 PF01430 Hsp33 protein E4625_21420 PF00392 Bacterial regulatory proteins, gntR family E4625_21425 PF00557 Metallopeptidase family M24 E4625_21425 PF01321 Creatinase/Prolidase N-terminal domain E4625_21430 PF11756 Nitrous oxide-stimulated promoter E4625_21435 PF00583 Acetyltransferase (GNAT) family E4625_21440 PF05433 Glycine zipper 2TM domain E4625_21445 PF00149 Calcineurin-like phosphoesterase E4625_21445 PF02872 5'-nucleotidase, C-terminal domain E4625_21450 PF01810 LysE type translocator E4625_21455 PF00196 Bacterial regulatory proteins, luxR family E4625_21455 PF03472 Autoinducer binding domain E4625_21460 PF00765 Autoinducer synthase E4625_21465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_21465 PF03466 LysR substrate binding domain E4625_21470 PF17876 Cold shock domain E4625_21470 PF08206 Ribonuclease B OB domain E4625_21470 PF00773 RNB domain E4625_21475 PF00440 Bacterial regulatory proteins, tetR family E4625_21485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E4625_21485 PF02378 Phosphotransferase system, EIIC E4625_21485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4625_21490 PF08125 Mannitol dehydrogenase C-terminal domain E4625_21490 PF01232 Mannitol dehydrogenase Rossmann domain E4625_21495 PF05068 Mannitol repressor E4625_21500 PF03471 Transporter associated domain E4625_21500 PF00999 Sodium/hydrogen exchanger family E4625_21500 PF02080 TrkA-C domain E4625_21520 PF01544 CorA-like Mg2+ transporter protein E4625_21525 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 E4625_21540 PF04307 LexA-binding, inner membrane-associated putative hydrolase E4625_21545 PF01773 Na+ dependent nucleoside transporter N-terminus E4625_21545 PF07662 Na+ dependent nucleoside transporter C-terminus E4625_21545 PF07670 Nucleoside recognition E4625_21550 PF00271 Helicase conserved C-terminal domain E4625_21550 PF00270 DEAD/DEAH box helicase E4625_21550 PF03880 DbpA RNA binding domain E4625_21575 PF01040 UbiA prenyltransferase family E4625_21580 PF00425 chorismate binding enzyme E4625_21585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4625_21585 PF16582 Middle domain of thiamine pyrophosphate E4625_21585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E4625_21590 PF12697 Alpha/beta hydrolase family E4625_21595 PF00378 Enoyl-CoA hydratase/isomerase E4625_21600 PF13378 Enolase C-terminal domain-like E4625_21615 PF00419 Fimbrial protein E4625_21620 PF00419 Fimbrial protein E4625_21625 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E4625_21625 PF02753 Pili assembly chaperone PapD, C-terminal domain E4625_21630 PF13953 PapC C-terminal domain E4625_21630 PF00577 Outer membrane usher protein E4625_21630 PF13954 PapC N-terminal domain E4625_21640 PF00419 Fimbrial protein E4625_21655 PF08453 Peptidase family M9 N-terminal E4625_21655 PF01752 Collagenase E4625_21660 PF02698 DUF218 domain E4625_21665 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E4625_21665 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E4625_21680 PF00561 alpha/beta hydrolase fold E4625_21685 PF03280 Proteobacterial lipase chaperone protein E4625_21700 PF12793 Sugar transport-related sRNA regulator N-term E4625_21700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4625_21710 PF01053 Cys/Met metabolism PLP-dependent enzyme E4625_21720 PF00465 Iron-containing alcohol dehydrogenase E4625_21735 PF03577 Peptidase family C69 E4625_21740 PF00106 short chain dehydrogenase E4625_21760 PF02308 MgtC family E4625_21765 PF02903 Alpha amylase, N-terminal ig-like domain E4625_21765 PF16657 Maltogenic Amylase, C-terminal domain E4625_21765 PF00128 Alpha amylase, catalytic domain E4625_21780 PF00884 Sulfatase E4625_21785 PF01037 Lrp/AsnC ligand binding domain E4625_21795 PF04204 Homoserine O-succinyltransferase E4625_21800 PF00013 KH domain E4625_21800 PF01966 HD domain E4625_21800 PF12072 Domain of unknown function (DUF3552) E4625_21805 PF00994 Probable molybdopterin binding domain E4625_21805 PF02464 Competence-damaged protein E4625_21815 PF00005 ABC transporter E4625_21835 PF07722 Peptidase C26 E4625_21845 PF13545 Crp-like helix-turn-helix domain E4625_21845 PF00027 Cyclic nucleotide-binding domain E4625_21855 PF13419 Haloacid dehalogenase-like hydrolase E4625_21860 PF02899 Phage integrase, N-terminal SAM-like domain E4625_21860 PF00589 Phage integrase family E4625_21870 PF01678 Diaminopimelate epimerase E4625_21875 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E4625_21875 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E4625_21885 PF01491 Frataxin-like domain E4625_21890 PF02230 Phospholipase/Carboxylesterase E4625_21895 PF12633 Adenylate cyclase NT domain E4625_21895 PF01295 Adenylate cyclase, class-I E4625_21900 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain E4625_21900 PF03900 Porphobilinogen deaminase, C-terminal domain E4625_21905 PF02602 Uroporphyrinogen-III synthase HemD E4625_21910 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase E4625_21920 PF03692 Putative zinc- or iron-chelating domain E4625_21925 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded E4625_21940 PF00593 TonB dependent receptor E4625_21940 PF07715 TonB-dependent Receptor Plug Domain E4625_21965 PF01638 HxlR-like helix-turn-helix E4625_21970 PF08803 Putative mono-oxygenase ydhR E4625_21985 PF06055 Exopolysaccharide synthesis, ExoD E4625_21995 PF00990 Diguanylate cyclase, GGDEF domain E4625_21995 PF17151 Periplasmic sensor domain E4625_22010 PF13036 Peptidoglycan-synthase activator LpoB E4625_22045 PF06968 Biotin and Thiamin Synthesis associated domain E4625_22045 PF04055 Radical SAM superfamily E4625_22050 PF05690 Thiazole biosynthesis protein ThiG E4625_22060 PF00899 ThiF family E4625_22065 PF02581 Thiamine monophosphate synthase E4625_22070 PF13667 ThiC-associated domain E4625_22070 PF01964 Radical SAM ThiC family E4625_22075 PF01117 Aerolysin toxin E4625_22075 PF03440 Aerolysin/Pertussis toxin (APT) domain E4625_22090 PF00072 Response regulator receiver domain E4625_22090 PF00486 Transcriptional regulatory protein, C terminal E4625_22100 PF05525 Branched-chain amino acid transport protein E4625_22105 PF18030 RimK PreATP-grasp domain E4625_22105 PF08443 RimK-like ATP-grasp domain E4625_22110 PF02574 Homocysteine S-methyltransferase E4625_22110 PF02965 Vitamin B12 dependent methionine synthase, activation domain E4625_22110 PF02607 B12 binding domain E4625_22110 PF02310 B12 binding domain E4625_22110 PF00809 Pterin binding enzyme E4625_22115 PF00999 Sodium/hydrogen exchanger family E4625_22130 PF08668 HDOD domain E4625_22140 PF04228 Putative neutral zinc metallopeptidase E4625_22145 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) E4625_22160 PF08447 PAS fold E4625_22160 PF13426 PAS domain E4625_22160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_22165 PF01740 STAS domain E4625_22165 PF08678 Rsbr N terminal E4625_22170 PF13581 Histidine kinase-like ATPase domain E4625_22175 PF00672 HAMP domain E4625_22175 PF00512 His Kinase A (phospho-acceptor) domain E4625_22175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_22175 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E4625_22175 PF00072 Response regulator receiver domain E4625_22175 PF01627 Hpt domain E4625_22180 PF00072 Response regulator receiver domain E4625_22190 PF07690 Major Facilitator Superfamily E4625_22195 PF01914 MarC family integral membrane protein E4625_22210 PF13580 SIS domain E4625_22215 PF00367 phosphotransferase system, EIIB E4625_22215 PF02378 Phosphotransferase system, EIIC E4625_22235 PF01380 SIS domain E4625_22235 PF01418 Helix-turn-helix domain, rpiR family E4625_22240 PF01523 Putative modulator of DNA gyrase E4625_22245 PF00795 Carbon-nitrogen hydrolase E4625_22255 PF13116 Protein of unknown function E4625_22255 PF13502 AsmA-like C-terminal region E4625_22260 PF00575 S1 RNA binding domain E4625_22260 PF10150 Ribonuclease E/G family E4625_22265 PF02545 Maf-like protein E4625_22270 PF04093 rod shape-determining protein MreD E4625_22275 PF04085 rod shape-determining protein MreC E4625_22305 PF14245 Type IV pilin PilA E4625_22305 PF07963 Prokaryotic N-terminal methylation motif E4625_22310 PF08334 Type II secretion system (T2SS), protein G E4625_22310 PF07963 Prokaryotic N-terminal methylation motif E4625_22325 PF00482 Type II secretion system (T2SS), protein F E4625_22330 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain E4625_22330 PF00437 Type II/IV secretion system protein E4625_22345 PF03958 Bacterial type II/III secretion system short domain E4625_22345 PF00263 Bacterial type II and III secretion system protein E4625_22375 PF17157 Gammaproteobacterial periplasmic sensor domain E4625_22375 PF00990 Diguanylate cyclase, GGDEF domain E4625_22375 PF00563 EAL domain E4625_22380 PF00563 EAL domain E4625_22380 PF12792 CSS motif domain associated with EAL E4625_22385 PF01699 Sodium/calcium exchanger protein E4625_22390 PF00221 Aromatic amino acid lyase E4625_22395 PF17391 Urocanase N-terminal domain E4625_22395 PF01175 Urocanase Rossmann-like domain E4625_22395 PF17392 Urocanase C-terminal domain E4625_22400 PF00491 Arginase family E4625_22405 PF01979 Amidohydrolase family E4625_22410 PF07702 UTRA domain E4625_22410 PF00392 Bacterial regulatory proteins, gntR family E4625_22415 PF00484 Carbonic anhydrase E4625_22420 PF04542 Sigma-70 region 2 E4625_22420 PF00140 Sigma-70 factor, region 1.2 E4625_22420 PF04545 Sigma-70, region 4 E4625_22425 PF18075 FtsX extracellular domain E4625_22430 PF00005 ABC transporter E4625_22435 PF02881 SRP54-type protein, helical bundle domain E4625_22435 PF00448 SRP54-type protein, GTPase domain E4625_22450 PF07226 Protein of unknown function (DUF1422) E4625_22455 PF00440 Bacterial regulatory proteins, tetR family E4625_22465 PF13091 PLD-like domain E4625_22470 PF01464 Transglycosylase SLT domain E4625_22480 PF02416 mttA/Hcf106 family E4625_22485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_22485 PF03466 LysR substrate binding domain E4625_22490 PF01914 MarC family integral membrane protein E4625_22495 PF10678 Protein of unknown function (DUF2492) E4625_22500 PF00375 Sodium:dicarboxylate symporter family E4625_22510 PF03466 LysR substrate binding domain E4625_22510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_22515 PF13533 Biotin-lipoyl like E4625_22520 PF07690 Major Facilitator Superfamily E4625_22525 PF07947 YhhN family E4625_22550 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4625_22550 PF00326 Prolyl oligopeptidase family E4625_22565 PF00106 short chain dehydrogenase E4625_22570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_22570 PF03466 LysR substrate binding domain E4625_22575 PF02525 Flavodoxin-like fold E4625_22580 PF00999 Sodium/hydrogen exchanger family E4625_22580 PF02254 TrkA-N domain E4625_22630 PF01196 Ribosomal protein L17 E4625_22635 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain E4625_22635 PF01000 RNA polymerase Rpb3/RpoA insert domain E4625_22635 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain E4625_22640 PF00163 Ribosomal protein S4/S9 N-terminal domain E4625_22640 PF01479 S4 domain E4625_22645 PF00411 Ribosomal protein S11 E4625_22650 PF00416 Ribosomal protein S13/S18 E4625_22655 PF00444 Ribosomal protein L36 E4625_22660 PF00344 SecY translocase E4625_22665 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A E4625_22670 PF00327 Ribosomal protein L30p/L7e E4625_22675 PF03719 Ribosomal protein S5, C-terminal domain E4625_22675 PF00333 Ribosomal protein S5, N-terminal domain E4625_22680 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast E4625_22685 PF00347 Ribosomal protein L6 E4625_22690 PF00410 Ribosomal protein S8 E4625_22695 PF00253 Ribosomal protein S14p/S29e E4625_22700 PF00673 ribosomal L5P family C-terminus E4625_22700 PF00281 Ribosomal protein L5 E4625_22705 PF00467 KOW motif E4625_22705 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 E4625_22710 PF00238 Ribosomal protein L14p/L23e E4625_22715 PF00366 Ribosomal protein S17 E4625_22720 PF00831 Ribosomal L29 protein E4625_22725 PF00252 Ribosomal protein L16p/L10e E4625_22730 PF07650 KH domain E4625_22730 PF00189 Ribosomal protein S3, C-terminal domain E4625_22735 PF00237 Ribosomal protein L22p/L17e E4625_22740 PF00203 Ribosomal protein S19 E4625_22745 PF00181 Ribosomal Proteins L2, RNA binding domain E4625_22745 PF03947 Ribosomal Proteins L2, C-terminal domain E4625_22750 PF00276 Ribosomal protein L23 E4625_22755 PF00573 Ribosomal protein L4/L1 family E4625_22760 PF00297 Ribosomal protein L3 E4625_22765 PF00338 Ribosomal protein S10p/S20e E4625_22775 PF00672 HAMP domain E4625_22775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_22775 PF00512 His Kinase A (phospho-acceptor) domain E4625_22780 PF00072 Response regulator receiver domain E4625_22780 PF00486 Transcriptional regulatory protein, C terminal E4625_22785 PF01272 Transcription elongation factor, GreA/GreB, C-term E4625_22785 PF03449 Transcription elongation factor, N-terminal E4625_22790 PF17674 HHH domain E4625_22790 PF09371 Tex-like protein N-terminal domain E4625_22790 PF00575 S1 RNA binding domain E4625_22790 PF16921 Tex protein YqgF-like domain E4625_22810 PF00561 alpha/beta hydrolase fold E4625_22815 PF00156 Phosphoribosyl transferase domain E4625_22820 PF01106 NifU-like domain E4625_22820 PF01521 Iron-sulphur cluster biosynthesis E4625_22825 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus E4625_22825 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus E4625_22830 PF02556 Preprotein translocase subunit SecB E4625_22835 PF00581 Rhodanese-like domain E4625_22840 PF06415 BPG-independent PGAM N-terminus (iPGM_N) E4625_22840 PF01676 Metalloenzyme superfamily E4625_22845 PF01551 Peptidase family M23 E4625_22855 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E4625_22855 PF00356 Bacterial regulatory proteins, lacI family E4625_22860 PF01081 KDPG and KHG aldolase E4625_22865 PF00920 Dehydratase family E4625_22870 PF01202 Shikimate kinase E4625_22875 PF02447 GntP family permease E4625_22880 PF13091 PLD-like domain E4625_22885 PF00270 DEAD/DEAH box helicase E4625_22885 PF00271 Helicase conserved C-terminal domain E4625_22885 PF17191 RecG wedge domain E4625_22895 PF09500 Putative thioesterase (yiiD_Cterm) E4625_22895 PF00583 Acetyltransferase (GNAT) family E4625_22905 PF02580 D-Tyr-tRNA(Tyr) deacylase E4625_22910 PF03631 Virulence factor BrkB E4625_22915 PF03631 Virulence factor BrkB E4625_22925 PF00120 Glutamine synthetase, catalytic domain E4625_22925 PF03951 Glutamine synthetase, beta-Grasp domain E4625_22935 PF00512 His Kinase A (phospho-acceptor) domain E4625_22935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_22935 PF00989 PAS fold E4625_22940 PF00072 Response regulator receiver domain E4625_22940 PF02954 Bacterial regulatory protein, Fis family E4625_22940 PF00158 Sigma-54 interaction domain E4625_22945 PF00962 Adenosine/AMP deaminase E4625_22950 PF04055 Radical SAM superfamily E4625_22950 PF06969 HemN C-terminal domain E4625_22955 PF10675 Protein of unknown function (DUF2489) E4625_22960 PF04220 Der GTPase activator (YihI) E4625_22970 PF00034 Cytochrome c E4625_22975 PF01926 50S ribosome-binding GTPase E4625_22980 PF07369 Protein of unknown function (DUF1488) E4625_22985 PF01488 Shikimate / quinate 5-dehydrogenase E4625_22985 PF08501 Shikimate dehydrogenase substrate binding domain E4625_22985 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E4625_22990 PF01218 Coproporphyrinogen III oxidase E4625_22995 PF01300 Telomere recombination E4625_23000 PF00731 AIR carboxylase E4625_23005 PF01396 Topoisomerase DNA binding C4 zinc finger E4625_23010 PF04361 Protein of unknown function (DUF494) E4625_23015 PF02481 DNA recombination-mediator protein A E4625_23015 PF17782 DprA winged helix domain E4625_23025 PF01327 Polypeptide deformylase E4625_23030 PF00551 Formyl transferase E4625_23030 PF02911 Formyl transferase, C-terminal domain E4625_23035 PF01029 NusB family E4625_23035 PF01189 16S rRNA methyltransferase RsmB/F E4625_23040 PF02080 TrkA-C domain E4625_23040 PF02254 TrkA-N domain E4625_23045 PF02386 Cation transport protein E4625_23050 PF02646 RmuC family E4625_23065 PF02082 Transcriptional regulator E4625_23070 PF00294 pfkB family carbohydrate kinase E4625_23075 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E4625_23075 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E4625_23080 PF02540 NAD synthase E4625_23080 PF00958 GMP synthase C terminal domain E4625_23080 PF00117 Glutamine amidotransferase class-I E4625_23085 PF00171 Aldehyde dehydrogenase family E4625_23090 PF00202 Aminotransferase class-III E4625_23095 PF01381 Helix-turn-helix E4625_23095 PF07883 Cupin domain E4625_23100 PF00171 Aldehyde dehydrogenase family E4625_23110 PF00892 EamA-like transporter family E4625_23115 PF12833 Helix-turn-helix domain E4625_23120 PF01810 LysE type translocator E4625_23125 PF00689 Cation transporting ATPase, C-terminus E4625_23125 PF00690 Cation transporter/ATPase, N-terminus E4625_23135 PF04143 Sulphur transport E4625_23145 PF01810 LysE type translocator E4625_23155 PF06206 CpeT/CpcT family (DUF1001) E4625_23195 PF03466 LysR substrate binding domain E4625_23195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_23215 PF00580 UvrD/REP helicase N-terminal domain E4625_23215 PF13361 UvrD-like helicase C-terminal domain E4625_23240 PF03466 LysR substrate binding domain E4625_23240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_23245 PF00107 Zinc-binding dehydrogenase E4625_23245 PF08240 Alcohol dehydrogenase GroES-like domain E4625_23250 PF00756 Putative esterase E4625_23260 PF12867 DinB superfamily E4625_23260 PF03781 Sulfatase-modifying factor enzyme 1 E4625_23265 PF13593 SBF-like CPA transporter family (DUF4137) E4625_23270 PF13520 Amino acid permease E4625_23275 PF01588 Putative tRNA binding domain E4625_23280 PF13520 Amino acid permease E4625_23285 PF04074 YhcH/YjgK/YiaL E4625_23290 PF02837 Glycosyl hydrolases family 2, sugar binding domain E4625_23290 PF02836 Glycosyl hydrolases family 2, TIM barrel domain E4625_23290 PF00703 Glycosyl hydrolases family 2 E4625_23290 PF02929 Beta galactosidase small chain E4625_23290 PF16353 Domain of unknown function(DUF4981) E4625_23295 PF00356 Bacterial regulatory proteins, lacI family E4625_23335 PF00132 Bacterial transferase hexapeptide (six repeats) E4625_23340 PF01367 5'-3' exonuclease, C-terminal SAM fold E4625_23340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E4625_23340 PF00476 DNA polymerase family A E4625_23340 PF01612 3'-5' exonuclease E4625_23355 PF06005 Cell division protein ZapB E4625_23365 PF00132 Bacterial transferase hexapeptide (six repeats) E4625_23365 PF06426 Serine acetyltransferase, N-terminal E4625_23370 PF01545 Cation efflux family E4625_23370 PF16916 Dimerisation domain of Zinc Transporter E4625_23375 PF00072 Response regulator receiver domain E4625_23375 PF00486 Transcriptional regulatory protein, C terminal E4625_23380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_23380 PF00672 HAMP domain E4625_23380 PF16527 Two-component sensor protein CpxA, periplasmic domain E4625_23380 PF00512 His Kinase A (phospho-acceptor) domain E4625_23385 PF00588 SpoU rRNA Methylase family E4625_23390 PF01554 MatE E4625_23395 PF02630 SCO1/SenC E4625_23415 PF01726 LexA DNA binding domain E4625_23415 PF00717 Peptidase S24-like E4625_23420 PF01553 Acyltransferase E4625_23425 PF01040 UbiA prenyltransferase family E4625_23430 PF04345 Chorismate lyase E4625_23435 PF03748 Flagellar basal body-associated protein FliL E4625_23455 PF00107 Zinc-binding dehydrogenase E4625_23455 PF08240 Alcohol dehydrogenase GroES-like domain E4625_23460 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E4625_23460 PF00356 Bacterial regulatory proteins, lacI family E4625_23465 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4625_23475 PF03611 PTS system sugar-specific permease component E4625_23480 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) E4625_23485 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E4625_23490 PF00535 Glycosyl transferase family 2 E4625_23495 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E4625_23500 PF01467 Cytidylyltransferase-like E4625_23505 PF04393 Protein of unknown function (DUF535) E4625_23510 PF06827 Zinc finger found in FPG and IleRS E4625_23510 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain E4625_23510 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain E4625_23520 PF00471 Ribosomal protein L33 E4625_23525 PF00830 Ribosomal L28 family E4625_23530 PF04002 RadC-like JAB domain E4625_23535 PF04127 DNA / pantothenate metabolism flavoprotein E4625_23535 PF02441 Flavoprotein E4625_23540 PF00692 dUTPase E4625_23545 PF00440 Bacterial regulatory proteins, tetR family E4625_23550 PF00924 Mechanosensitive ion channel E4625_23550 PF05552 Conserved TM helix E4625_23565 PF00342 Phosphoglucose isomerase E4625_23570 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain E4625_23570 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain E4625_23575 PF03466 LysR substrate binding domain E4625_23575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_23590 PF13607 Succinyl-CoA ligase like flavodoxin domain E4625_23590 PF13380 CoA binding domain E4625_23590 PF00583 Acetyltransferase (GNAT) family E4625_23615 PF12724 Flavodoxin domain E4625_23620 PF02386 Cation transport protein E4625_23625 PF01205 Uncharacterized protein family UPF0029 E4625_23625 PF09186 Domain of unknown function (DUF1949) E4625_23630 PF00557 Metallopeptidase family M24 E4625_23635 PF13193 AMP-binding enzyme C-terminal domain E4625_23635 PF00501 AMP-binding enzyme E4625_23640 PF00378 Enoyl-CoA hydratase/isomerase E4625_23640 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E4625_23640 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E4625_23645 PF02803 Thiolase, C-terminal domain E4625_23645 PF00108 Thiolase, N-terminal domain E4625_23650 PF00072 Response regulator receiver domain E4625_23650 PF00486 Transcriptional regulatory protein, C terminal E4625_23655 PF00672 HAMP domain E4625_23655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_23655 PF00512 His Kinase A (phospho-acceptor) domain E4625_23660 PF01547 Bacterial extracellular solute-binding protein E4625_23670 PF01206 Sulfurtransferase TusA E4625_23675 PF01042 Endoribonuclease L-PSP E4625_23685 PF00691 OmpA family E4625_23685 PF13488 Glycine zipper E4625_23690 PF02743 Cache domain E4625_23690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4625_23690 PF00672 HAMP domain E4625_23695 PF03352 Methyladenine glycosylase E4625_23700 PF02091 Glycyl-tRNA synthetase alpha subunit E4625_23705 PF05746 DALR anticodon binding domain E4625_23705 PF02092 Glycyl-tRNA synthetase beta subunit E4625_23715 PF01202 Shikimate kinase E4625_23735 PF03222 Tryptophan/tyrosine permease family E4625_23740 PF12801 4Fe-4S binding domain E4625_23750 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4625_23750 PF18113 Rubredoxin binding C-terminal domain E4625_23755 PF00301 Rubredoxin E4625_23755 PF00258 Flavodoxin E4625_23755 PF00753 Metallo-beta-lactamase superfamily E4625_23760 PF00158 Sigma-54 interaction domain E4625_23760 PF01590 GAF domain E4625_23765 PF00392 Bacterial regulatory proteins, gntR family E4625_23765 PF07702 UTRA domain E4625_23770 PF02378 Phosphotransferase system, EIIC E4625_23770 PF00367 phosphotransferase system, EIIB E4625_23775 PF11975 Family 4 glycosyl hydrolase C-terminal domain E4625_23775 PF02056 Family 4 glycosyl hydrolase E4625_23780 PF00356 Bacterial regulatory proteins, lacI family E4625_23785 PF13458 Periplasmic binding protein E4625_23790 PF02653 Branched-chain amino acid transport system / permease component E4625_23795 PF02653 Branched-chain amino acid transport system / permease component E4625_23795 PF11862 Domain of unknown function (DUF3382) E4625_23800 PF00005 ABC transporter E4625_23800 PF12399 Branched-chain amino acid ATP-binding cassette transporter E4625_23805 PF00005 ABC transporter E4625_23820 PF00581 Rhodanese-like domain E4625_23825 PF01694 Rhomboid family E4625_23825 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease E4625_23830 PF12262 Bacterial virulence factor lipase N-terminal E4625_23835 PF04380 Membrane fusogenic activity E4625_23840 PF00175 Oxidoreductase NAD-binding domain E4625_23845 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase E4625_23855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4625_23855 PF07498 Rho termination factor, N-terminal domain E4625_23855 PF07497 Rho termination factor, RNA-binding domain E4625_23860 PF00085 Thioredoxin E4625_23865 PF00271 Helicase conserved C-terminal domain E4625_23865 PF00270 DEAD/DEAH box helicase E4625_23870 PF02541 Ppx/GppA phosphatase family E4625_23885 PF04445 Putative SAM-dependent methyltransferase E4625_23890 PF00563 EAL domain E4625_23890 PF00990 Diguanylate cyclase, GGDEF domain E4625_23890 PF03707 Bacterial signalling protein N terminal repeat E4625_23895 PF01432 Peptidase family M3 E4625_23900 PF00490 Delta-aminolevulinic acid dehydratase E4625_23905 PF01026 TatD related DNase E4625_23910 PF00902 Sec-independent protein translocase protein (TatC) E4625_23915 PF02416 mttA/Hcf106 family E4625_23920 PF02416 mttA/Hcf106 family E4625_23925 PF03109 ABC1 family E4625_23930 PF02036 SCP-2 sterol transfer family E4625_23935 PF01209 ubiE/COQ5 methyltransferase family E4625_23940 PF02537 CrcB-like protein, Camphor Resistance (CrcB) E4625_23945 PF07969 Amidohydrolase family E4625_23985 PF03544 Gram-negative bacterial TonB protein C-terminal E4625_23990 PF02472 Biopolymer transport protein ExbD/TolR E4625_23995 PF01618 MotA/TolQ/ExbB proton channel family E4625_24000 PF01618 MotA/TolQ/ExbB proton channel family E4625_24010 PF00196 Bacterial regulatory proteins, luxR family E4625_24010 PF03472 Autoinducer binding domain E4625_24015 PF01380 SIS domain E4625_24020 PF08220 DeoR-like helix-turn-helix domain E4625_24020 PF00455 DeoR C terminal sensor domain E4625_24025 PF00486 Transcriptional regulatory protein, C terminal E4625_24025 PF00072 Response regulator receiver domain E4625_24030 PF00512 His Kinase A (phospho-acceptor) domain E4625_24030 PF00672 HAMP domain E4625_24030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4625_24035 PF00905 Penicillin binding protein transpeptidase domain E4625_24040 PF06123 Inner membrane protein CreD E4625_24045 PF00132 Bacterial transferase hexapeptide (six repeats) E4625_24045 PF12804 MobA-like NTP transferase domain E4625_24045 PF14602 Hexapeptide repeat of succinyl-transferase E4625_24050 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain E4625_24050 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain E4625_24055 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4625_24055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4625_24060 PF00231 ATP synthase E4625_24065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4625_24065 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4625_24065 PF00306 ATP synthase alpha/beta chain, C terminal domain E4625_24070 PF00213 ATP synthase delta (OSCP) subunit E4625_24075 PF00430 ATP synthase B/B' CF(0) E4625_24080 PF00137 ATP synthase subunit C E4625_24085 PF00119 ATP synthase A chain E4625_24095 PF02195 ParB-like nuclease domain E4625_24095 PF17762 HTH domain found in ParB protein E4625_24100 PF13614 AAA domain E4625_24105 PF02527 rRNA small subunit methyltransferase G E4625_24110 PF13932 GidA associated domain E4625_24110 PF01134 Glucose inhibited division protein A E4625_24115 PF00258 Flavodoxin E4625_24120 PF07715 TonB-dependent Receptor Plug Domain E4625_24120 PF00593 TonB dependent receptor E4625_24125 PF00005 ABC transporter E4625_24130 PF00005 ABC transporter E4625_24140 PF01032 FecCD transport family E4625_24145 PF01926 50S ribosome-binding GTPase E4625_24145 PF12631 MnmE helical domain E4625_24145 PF10396 GTP-binding protein TrmE N-terminus E4625_24150 PF02096 60Kd inner membrane protein E4625_24150 PF14849 YidC periplasmic domain E4625_24155 PF01809 Putative membrane protein insertion efficiency factor E4625_24160 PF00825 Ribonuclease P E4625_24165 PF00468 Ribosomal protein L34 E4625_24175 PF00528 Binding-protein-dependent transport system inner membrane component E4625_24180 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4625_24190 PF08447 PAS fold E4625_24190 PF08448 PAS fold E4625_24190 PF00563 EAL domain E4625_24190 PF00990 Diguanylate cyclase, GGDEF domain E4625_24195 PF06834 TraU protein E4625_24225 PF07728 AAA domain (dynein-related subfamily) E4625_24225 PF08406 CbbQ/NirQ/NorQ C-terminal E4625_24235 PF00436 Single-strand binding protein family E4625_24285 PF00111 2Fe-2S iron-sulfur cluster binding domain E4625_24400 PF01548 Transposase E4625_24400 PF02371 Transposase IS116/IS110/IS902 family E4625_24405 PF01526 Tn3 transposase DDE domain E4625_24405 PF13700 Domain of unknown function (DUF4158) E4625_24410 PF00239 Resolvase, N terminal domain E4625_24410 PF02796 Helix-turn-helix domain of resolvase E4625_24420 PF13495 Phage integrase, N-terminal SAM-like domain E4625_24420 PF00589 Phage integrase family E4625_24425 PF13599 Pentapeptide repeats (9 copies) E4625_24435 PF00893 Small Multidrug Resistance protein E4625_24445 PF07690 Major Facilitator Superfamily E4625_24450 PF00905 Penicillin binding protein transpeptidase domain E4625_24455 PF13427 Domain of unknown function (DUF4111) E4625_24455 PF01909 Nucleotidyltransferase domain E4625_24460 PF00186 Dihydrofolate reductase E4625_24475 PF13610 DDE domain E4625_24500 PF01636 Phosphotransferase enzyme family E4625_24510 PF13610 DDE domain E4625_24515 PF01636 Phosphotransferase enzyme family E4625_24530 PF05717 IS66 Orf2 like protein E4625_24535 PF03050 Transposase IS66 family E4625_24535 PF13817 IS66 C-terminal element E4625_24535 PF13005 zinc-finger binding domain of transposase IS66 E4625_24535 PF13007 Transposase C of IS166 homeodomain E4625_24555 PF03707 Bacterial signalling protein N terminal repeat E4625_24555 PF00990 Diguanylate cyclase, GGDEF domain E4625_24555 PF00563 EAL domain E4625_24560 PF05052 MerE protein E4625_24565 PF13411 MerR HTH family regulatory protein E4625_24570 PF12324 Helix-turn-helix domain of alkylmercury lyase E4625_24570 PF03243 Alkylmercury lyase E4625_24575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4625_24575 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4625_24575 PF00403 Heavy-metal-associated domain E4625_24580 PF00403 Heavy-metal-associated domain E4625_24585 PF02411 MerT mercuric transport protein E4625_24590 PF00376 MerR family regulatory protein E4625_24590 PF09278 MerR, DNA binding E4625_24595 PF01548 Transposase E4625_24595 PF02371 Transposase IS116/IS110/IS902 family E4625_24655 PF02899 Phage integrase, N-terminal SAM-like domain E4625_24655 PF00589 Phage integrase family E4625_24695 PF06122 Conjugative relaxosome accessory transposon protein E4625_24810 PF01343 Peptidase family S49 E4625_24855 PF00565 Staphylococcal nuclease homologue E4625_24860 PF00216 Bacterial DNA-binding protein E4625_24925 PF13610 DDE domain E4625_24935 PF13610 DDE domain E4625_24945 PF02796 Helix-turn-helix domain of resolvase E4625_24945 PF00239 Resolvase, N terminal domain E4625_24965 PF07690 Major Facilitator Superfamily E4625_24970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4625_24970 PF03466 LysR substrate binding domain E4625_24980 PF07690 Major Facilitator Superfamily E4625_24985 PF02909 Tetracyclin repressor-like, C-terminal domain E4625_24985 PF00440 Bacterial regulatory proteins, tetR family E4625_25000 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase E4625_25005 PF01636 Phosphotransferase enzyme family E4625_25010 PF00809 Pterin binding enzyme E4625_25025 PF13614 AAA domain E4625_25030 PF02195 ParB-like nuclease domain E4625_25030 PF08535 KorB domain E4625_25030 PF06613 KorB C-terminal beta-barrel domain E4625_25075 PF00145 C-5 cytosine-specific DNA methylase E4625_25105 PF01131 DNA topoisomerase E4625_25105 PF01751 Toprim domain E4625_25195 PF00144 Beta-lactamase E4625_25200 PF08212 Lipocalin-like domain E4625_25205 PF00893 Small Multidrug Resistance protein E4625_25210 PF00196 Bacterial regulatory proteins, luxR family E4625_25220 PF13098 Thioredoxin-like domain E4625_25220 PF10411 Disulfide bond isomerase protein N-terminus