locus-tag class description AI20_00015 PF08351 Domain of unknown function (DUF1726) AI20_00015 PF17176 tRNA-binding domain AI20_00015 PF05127 Helicase AI20_00015 PF13718 GNAT acetyltransferase 2 AI20_00030 PF00210 Ferritin-like domain AI20_00040 PF02142 MGS-like domain AI20_00055 PF00710 Asparaginase, N-terminal AI20_00055 PF17763 Glutaminase/Asparaginase C-terminal domain AI20_00075 PF00356 Bacterial regulatory proteins, lacI family AI20_00080 PF00367 phosphotransferase system, EIIB AI20_00080 PF02378 Phosphotransferase system, EIIC AI20_00085 PF11941 Domain of unknown function (DUF3459) AI20_00085 PF00128 Alpha amylase, catalytic domain AI20_00090 PF12464 Maltose acetyltransferase AI20_00090 PF14602 Hexapeptide repeat of succinyl-transferase AI20_00115 PF00171 Aldehyde dehydrogenase family AI20_00120 PF00528 Binding-protein-dependent transport system inner membrane component AI20_00130 PF00528 Binding-protein-dependent transport system inner membrane component AI20_00135 PF08402 TOBE domain AI20_00135 PF00005 ABC transporter AI20_00145 PF03553 Na+/H+ antiporter family AI20_00185 PF00534 Glycosyl transferases group 1 AI20_00185 PF08323 Starch synthase catalytic domain AI20_00190 PF00483 Nucleotidyl transferase AI20_00195 PF05175 Methyltransferase small domain AI20_00195 PF08468 Methyltransferase small domain N-terminal AI20_00200 PF00701 Dihydrodipicolinate synthetase family AI20_00205 PF01590 GAF domain AI20_00205 PF00563 EAL domain AI20_00205 PF00990 Diguanylate cyclase, GGDEF domain AI20_00205 PF00360 Phytochrome region AI20_00215 PF13419 Haloacid dehalogenase-like hydrolase AI20_00220 PF17209 Hfq protein AI20_00225 PF04403 Paraquat-inducible protein A AI20_00230 PF02470 MlaD protein AI20_00235 PF03886 ABC-type transport auxiliary lipoprotein component AI20_00240 PF00691 OmpA family AI20_00240 PF01389 OmpA-like transmembrane domain AI20_00250 PF00657 GDSL-like Lipase/Acylhydrolase AI20_00255 PF04076 Bacterial OB fold (BOF) protein AI20_00260 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AI20_00260 PF01464 Transglycosylase SLT domain AI20_00265 PF04362 Bacterial Fe(2+) trafficking AI20_00270 PF10576 Iron-sulfur binding domain of endonuclease III AI20_00270 PF14815 NUDIX domain AI20_00270 PF00730 HhH-GPD superfamily base excision DNA repair protein AI20_00270 PF00633 Helix-hairpin-helix motif AI20_00275 PF16537 Type II secretion system protein B AI20_00280 PF01471 Putative peptidoglycan binding domain AI20_00280 PF13401 AAA domain AI20_00285 PF12627 Probable RNA and SrmB- binding site of polymerase A AI20_00285 PF01743 Poly A polymerase head domain AI20_00285 PF01966 HD domain AI20_00300 PF04172 LrgB-like family AI20_00305 PF03788 LrgA family AI20_00310 PF03466 LysR substrate binding domain AI20_00310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_00320 PF00155 Aminotransferase class I and II AI20_00320 PF00392 Bacterial regulatory proteins, gntR family AI20_00340 PF04073 Aminoacyl-tRNA editing domain AI20_00345 PF01384 Phosphate transporter family AI20_00350 PF01865 Protein of unknown function DUF47 AI20_00365 PF03279 Bacterial lipid A biosynthesis acyltransferase AI20_00370 PF01467 Cytidylyltransferase-like AI20_00370 PF00294 pfkB family carbohydrate kinase AI20_00375 PF02321 Outer membrane efflux protein AI20_00380 PF00293 NUDIX domain AI20_00385 PF06853 Protein of unknown function (DUF1249) AI20_00390 PF00149 Calcineurin-like phosphoesterase AI20_00395 PF05728 Uncharacterised protein family (UPF0227) AI20_00400 PF00293 NUDIX domain AI20_00410 PF07869 Protein of unknown function (DUF1656) AI20_00415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AI20_00415 PF00529 HlyD membrane-fusion protein of T1SS AI20_00420 PF04632 Fusaric acid resistance protein family AI20_00425 PF00204 DNA gyrase B AI20_00425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_00425 PF00986 DNA gyrase B subunit, carboxyl terminus AI20_00425 PF01751 Toprim domain AI20_00430 PF03989 DNA gyrase C-terminal domain, beta-propeller AI20_00430 PF00521 DNA gyrase/topoisomerase IV, subunit A AI20_00435 PF03466 LysR substrate binding domain AI20_00435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_00440 PF07690 Major Facilitator Superfamily AI20_00445 PF02600 Disulfide bond formation protein DsbB AI20_00485 PF00684 DnaJ central domain AI20_00485 PF00226 DnaJ domain AI20_00485 PF01556 DnaJ C terminal domain AI20_00495 PF00578 AhpC/TSA family AI20_00515 PF01553 Acyltransferase AI20_00520 PF04012 PspA/IM30 family AI20_00535 PF01541 GIY-YIG catalytic domain AI20_00545 PF00892 EamA-like transporter family AI20_00550 PF03167 Uracil DNA glycosylase superfamily AI20_00555 PF00892 EamA-like transporter family AI20_00560 PF03466 LysR substrate binding domain AI20_00560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_00565 PF00950 ABC 3 transport family AI20_00570 PF00005 ABC transporter AI20_00575 PF01297 Zinc-uptake complex component A periplasmic AI20_00595 PF01551 Peptidase family M23 AI20_00595 PF08525 Opacity-associated protein A N-terminal motif AI20_00595 PF01476 LysM domain AI20_00600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AI20_00605 PF04222 Protein of unknown function (DUF416) AI20_00620 PF02028 BCCT, betaine/carnitine/choline family transporter AI20_00625 PF01624 MutS domain I AI20_00625 PF05188 MutS domain II AI20_00625 PF05190 MutS family domain IV AI20_00625 PF00488 MutS domain V AI20_00625 PF05192 MutS domain III AI20_00645 PF02661 Fic/DOC family AI20_00645 PF13784 Fic/DOC family N-terminal AI20_00650 PF11798 IMS family HHH motif AI20_00650 PF11799 impB/mucB/samB family C-terminal domain AI20_00650 PF13438 Domain of unknown function (DUF4113) AI20_00650 PF00817 impB/mucB/samB family AI20_00655 PF00717 Peptidase S24-like AI20_00670 PF12161 HsdM N-terminal domain AI20_00670 PF02384 N-6 DNA Methylase AI20_00690 PF11867 Domain of unknown function (DUF3387) AI20_00690 PF18766 SWI2/SNF2 ATPase AI20_00690 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AI20_00715 PF12419 SNF2 Helicase protein AI20_00715 PF00176 SNF2 family N-terminal domain AI20_00715 PF00271 Helicase conserved C-terminal domain AI20_00720 PF04002 RadC-like JAB domain AI20_00755 PF09588 YqaJ-like viral recombinase domain AI20_00765 PF02464 Competence-damaged protein AI20_00770 PF00154 recA bacterial DNA recombination protein AI20_00775 PF02631 RecX family AI20_00780 PF02272 DHHA1 domain AI20_00780 PF01411 tRNA synthetases class II (A) AI20_00780 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AI20_00785 PF01842 ACT domain AI20_00785 PF00696 Amino acid kinase family AI20_00785 PF13840 ACT domain AI20_00790 PF02599 Global regulator protein family AI20_00825 PF00768 D-alanyl-D-alanine carboxypeptidase AI20_00830 PF09335 SNARE associated Golgi protein AI20_00835 PF00571 CBS domain AI20_00835 PF03471 Transporter associated domain AI20_00835 PF01595 Cyclin M transmembrane N-terminal domain AI20_00840 PF08264 Anticodon-binding domain of tRNA AI20_00840 PF00133 tRNA synthetases class I (I, L, M and V) AI20_00840 PF10458 Valyl tRNA synthetase tRNA binding arm AI20_00845 PF04364 DNA polymerase III chi subunit, HolC AI20_00850 PF02789 Cytosol aminopeptidase family, N-terminal domain AI20_00850 PF00883 Cytosol aminopeptidase family, catalytic domain AI20_00855 PF03739 Lipopolysaccharide export system permease LptF/LptG AI20_00865 PF03739 Lipopolysaccharide export system permease LptF/LptG AI20_00880 PF00909 Ammonium Transporter Family AI20_00885 PF01938 TRAM domain AI20_00885 PF05958 tRNA (Uracil-5-)-methyltransferase AI20_00890 PF00583 Acetyltransferase (GNAT) family AI20_00900 PF01026 TatD related DNase AI20_00905 PF07670 Nucleoside recognition AI20_00905 PF01773 Na+ dependent nucleoside transporter N-terminus AI20_00905 PF07662 Na+ dependent nucleoside transporter C-terminus AI20_00915 PF01791 DeoC/LacD family aldolase AI20_00920 PF02885 Glycosyl transferase family, helical bundle domain AI20_00920 PF00591 Glycosyl transferase family, a/b domain AI20_00920 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AI20_00925 PF01676 Metalloenzyme superfamily AI20_00930 PF01048 Phosphorylase superfamily AI20_00935 PF13426 PAS domain AI20_00935 PF08448 PAS fold AI20_00935 PF00563 EAL domain AI20_00935 PF08447 PAS fold AI20_00935 PF00990 Diguanylate cyclase, GGDEF domain AI20_00935 PF05231 MASE1 AI20_00945 PF18429 Domain of unknown function (DUF5609) AI20_00960 PF18073 Rubredoxin metal binding domain AI20_00965 PF07238 PilZ domain AI20_00970 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AI20_00975 PF00216 Bacterial DNA-binding protein AI20_00990 PF01207 Dihydrouridine synthase (Dus) AI20_01010 PF05525 Branched-chain amino acid transport protein AI20_01015 PF05525 Branched-chain amino acid transport protein AI20_01020 PF05175 Methyltransferase small domain AI20_01025 PF00271 Helicase conserved C-terminal domain AI20_01025 PF00270 DEAD/DEAH box helicase AI20_01030 PF03883 Peroxide stress protein YaaA AI20_01035 PF00437 Type II/IV secretion system protein AI20_01040 PF00437 Type II/IV secretion system protein AI20_01045 PF01168 Alanine racemase, N-terminal domain AI20_01050 PF14748 Pyrroline-5-carboxylate reductase dimerisation AI20_01050 PF03807 NADP oxidoreductase coenzyme F420-dependent AI20_01055 PF02325 YGGT family AI20_01060 PF02594 Uncharacterised ACR, YggU family COG1872 AI20_01075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AI20_01085 PF00132 Bacterial transferase hexapeptide (six repeats) AI20_01090 PF10952 Protein of unknown function (DUF2753) AI20_01095 PF00378 Enoyl-CoA hydratase/isomerase AI20_01110 PF00106 short chain dehydrogenase AI20_01115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AI20_01115 PF04073 Aminoacyl-tRNA editing domain AI20_01115 PF03129 Anticodon binding domain AI20_01120 PF00672 HAMP domain AI20_01120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_01125 PF07499 RuvA, C-terminal domain AI20_01125 PF01330 RuvA N terminal domain AI20_01130 PF17864 RuvB AAA lid domain AI20_01130 PF05496 Holliday junction DNA helicase RuvB P-loop domain AI20_01130 PF05491 RuvB C-terminal winged helix domain AI20_01135 PF01654 Cytochrome bd terminal oxidase subunit I AI20_01140 PF02322 Cytochrome bd terminal oxidase subunit II AI20_01145 PF08173 Membrane bound YbgT-like protein AI20_01150 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) AI20_01155 PF03061 Thioesterase superfamily AI20_01160 PF01618 MotA/TolQ/ExbB proton channel family AI20_01165 PF02472 Biopolymer transport protein ExbD/TolR AI20_01175 PF07676 WD40-like Beta Propeller Repeat AI20_01175 PF04052 TolB amino-terminal domain AI20_01180 PF00691 OmpA family AI20_01185 PF13174 Tetratricopeptide repeat AI20_01185 PF16331 TolA binding protein trimerisation AI20_01260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_01260 PF00672 HAMP domain AI20_01265 PF02445 Quinolinate synthetase A protein AI20_01270 PF01263 Aldose 1-epimerase AI20_01275 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AI20_01275 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AI20_01280 PF02446 4-alpha-glucanotransferase AI20_01285 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AI20_01285 PF02806 Alpha amylase, C-terminal all-beta domain AI20_01285 PF00128 Alpha amylase, catalytic domain AI20_01290 PF00128 Alpha amylase, catalytic domain AI20_01290 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AI20_01295 PF01641 SelR domain AI20_01300 PF02417 Chromate transporter AI20_01305 PF00293 NUDIX domain AI20_01310 PF00107 Zinc-binding dehydrogenase AI20_01310 PF16884 N-terminal domain of oxidoreductase AI20_01315 PF01047 MarR family AI20_01330 PF01037 Lrp/AsnC ligand binding domain AI20_01340 PF07690 Major Facilitator Superfamily AI20_01360 PF00209 Sodium:neurotransmitter symporter family AI20_01370 PF00209 Sodium:neurotransmitter symporter family AI20_01395 PF00155 Aminotransferase class I and II AI20_01395 PF00392 Bacterial regulatory proteins, gntR family AI20_01405 PF01810 LysE type translocator AI20_01410 PF01177 Asp/Glu/Hydantoin racemase AI20_01415 PF07732 Multicopper oxidase AI20_01415 PF07731 Multicopper oxidase AI20_01415 PF00394 Multicopper oxidase AI20_01425 PF04074 YhcH/YjgK/YiaL AI20_01430 PF00871 Acetokinase family AI20_01435 PF00924 Mechanosensitive ion channel AI20_01440 PF03734 L,D-transpeptidase catalytic domain AI20_01440 PF17969 L,D-transpeptidase C-terminal domain AI20_01445 PF00474 Sodium:solute symporter family AI20_01450 PF00561 alpha/beta hydrolase fold AI20_01485 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AI20_01495 PF12848 ABC transporter AI20_01495 PF00005 ABC transporter AI20_01500 PF01380 SIS domain AI20_01500 PF00571 CBS domain AI20_01505 PF01957 NfeD-like C-terminal, partner-binding AI20_01510 PF01145 SPFH domain / Band 7 family AI20_01510 PF16200 C-terminal region of band_7 AI20_01515 PF14824 Sirohaem biosynthesis protein central AI20_01515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AI20_01515 PF10414 Sirohaem synthase dimerisation region AI20_01520 PF01507 Phosphoadenosine phosphosulfate reductase family AI20_01525 PF00009 Elongation factor Tu GTP binding domain AI20_01530 PF02080 TrkA-C domain AI20_01530 PF03600 Citrate transporter AI20_01555 PF08447 PAS fold AI20_01555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_01575 PF00005 ABC transporter AI20_01590 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AI20_01605 PF00719 Inorganic pyrophosphatase AI20_01610 PF08245 Mur ligase middle domain AI20_01610 PF01225 Mur ligase family, catalytic domain AI20_01610 PF02875 Mur ligase family, glutamate ligase domain AI20_01615 PF02441 Flavoprotein AI20_01620 PF00440 Bacterial regulatory proteins, tetR family AI20_01625 PF00156 Phosphoribosyl transferase domain AI20_01630 PF00005 ABC transporter AI20_01635 PF01061 ABC-2 type transporter AI20_01640 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component AI20_01645 PF01869 BadF/BadG/BcrA/BcrD ATPase family AI20_01665 PF02569 Pantoate-beta-alanine ligase AI20_01670 PF02548 Ketopantoate hydroxymethyltransferase AI20_01675 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AI20_01680 PF12626 Polymerase A arginine-rich C-terminus AI20_01680 PF01743 Poly A polymerase head domain AI20_01680 PF12627 Probable RNA and SrmB- binding site of polymerase A AI20_01685 PF00749 tRNA synthetases class I (E and Q), catalytic domain AI20_01690 PF01258 Prokaryotic dksA/traR C4-type zinc finger AI20_01695 PF17746 SfsA N-terminal OB domain AI20_01695 PF03749 Sugar fermentation stimulation protein RE domain AI20_01705 PF04408 Helicase associated domain (HA2) AI20_01705 PF00271 Helicase conserved C-terminal domain AI20_01705 PF08482 ATP-dependent helicase C-terminal AI20_01705 PF00270 DEAD/DEAH box helicase AI20_01710 PF00912 Transglycosylase AI20_01710 PF14814 Bifunctional transglycosylase second domain AI20_01710 PF00905 Penicillin binding protein transpeptidase domain AI20_01715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AI20_01720 PF00893 Small Multidrug Resistance protein AI20_01725 PF00893 Small Multidrug Resistance protein AI20_01735 PF11849 Domain of unknown function (DUF3369) AI20_01745 PF01569 PAP2 superfamily AI20_01760 PF00202 Aminotransferase class-III AI20_01765 PF00654 Voltage gated chloride channel AI20_01775 PF01521 Iron-sulphur cluster biosynthesis AI20_01805 PF02954 Bacterial regulatory protein, Fis family AI20_01810 PF01207 Dihydrouridine synthase (Dus) AI20_01820 PF02321 Outer membrane efflux protein AI20_01825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AI20_01855 PF00072 Response regulator receiver domain AI20_01860 PF00854 POT family AI20_01865 PF00483 Nucleotidyl transferase AI20_01875 PF00459 Inositol monophosphatase family AI20_01880 PF03795 YCII-related domain AI20_01885 PF04279 Intracellular septation protein A AI20_01890 PF00282 Pyridoxal-dependent decarboxylase conserved domain AI20_01895 PF03006 Haemolysin-III related AI20_01900 PF06826 Predicted Permease Membrane Region AI20_01900 PF02080 TrkA-C domain AI20_01920 PF01584 CheW-like domain AI20_01920 PF00072 Response regulator receiver domain AI20_01925 PF13472 GDSL-like Lipase/Acylhydrolase family AI20_01930 PF00005 ABC transporter AI20_01940 PF08338 Domain of unknown function (DUF1731) AI20_01940 PF01370 NAD dependent epimerase/dehydratase family AI20_01945 PF00563 EAL domain AI20_01945 PF12792 CSS motif domain associated with EAL AI20_01950 PF00155 Aminotransferase class I and II AI20_01955 PF04389 Peptidase family M28 AI20_01955 PF01483 Proprotein convertase P-domain AI20_01960 PF02390 Putative methyltransferase AI20_01965 PF04320 Protein with unknown function (DUF469) AI20_01970 PF04960 Glutaminase AI20_01975 PF00581 Rhodanese-like domain AI20_01980 PF05922 Peptidase inhibitor I9 AI20_01980 PF00082 Subtilase family AI20_01985 PF06004 Bacterial protein of unknown function (DUF903) AI20_01990 PF00005 ABC transporter AI20_01990 PF00664 ABC transporter transmembrane region AI20_01995 PF00561 alpha/beta hydrolase fold AI20_02015 PF05547 Immune inhibitor A peptidase M6 AI20_02015 PF00801 PKD domain AI20_02025 PF06877 Regulator of ribonuclease activity B AI20_02030 PF00563 EAL domain AI20_02030 PF00990 Diguanylate cyclase, GGDEF domain AI20_02030 PF03707 Bacterial signalling protein N terminal repeat AI20_02055 PF09905 DNA-binding protein VF530 AI20_02060 PF02666 Phosphatidylserine decarboxylase AI20_02065 PF03193 RsgA GTPase AI20_02070 PF00929 Exonuclease AI20_02105 PF00313 'Cold-shock' DNA-binding domain AI20_02115 PF00672 HAMP domain AI20_02115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_02120 PF00749 tRNA synthetases class I (E and Q), catalytic domain AI20_02165 PF00704 Glycosyl hydrolases family 18 AI20_02165 PF06483 Chitinase C AI20_02180 PF02472 Biopolymer transport protein ExbD/TolR AI20_02185 PF01618 MotA/TolQ/ExbB proton channel family AI20_02190 PF01618 MotA/TolQ/ExbB proton channel family AI20_02200 PF00593 TonB dependent receptor AI20_02200 PF07715 TonB-dependent Receptor Plug Domain AI20_02205 PF00528 Binding-protein-dependent transport system inner membrane component AI20_02210 PF12911 N-terminal TM domain of oligopeptide transport permease C AI20_02210 PF00528 Binding-protein-dependent transport system inner membrane component AI20_02220 PF00005 ABC transporter AI20_02220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AI20_02225 PF00005 ABC transporter AI20_02225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AI20_02235 PF07687 Peptidase dimerisation domain AI20_02235 PF01546 Peptidase family M20/M25/M40 AI20_02240 PF00156 Phosphoribosyl transferase domain AI20_02250 PF07417 Sigma factor-binding transcriptional regulator Crl AI20_02255 PF00696 Amino acid kinase family AI20_02255 PF01472 PUA domain AI20_02260 PF00171 Aldehyde dehydrogenase family AI20_02270 PF00582 Universal stress protein family AI20_02290 PF00294 pfkB family carbohydrate kinase AI20_02295 PF04227 Indigoidine synthase A like protein AI20_02300 PF00194 Eukaryotic-type carbonic anhydrase AI20_02305 PF00034 Cytochrome c AI20_02305 PF03150 Di-haem cytochrome c peroxidase AI20_02340 PF00550 Phosphopantetheine attachment site AI20_02345 PF00550 Phosphopantetheine attachment site AI20_02355 PF00501 AMP-binding enzyme AI20_02355 PF13193 AMP-binding enzyme C-terminal domain AI20_02360 PF07977 FabA-like domain AI20_02370 PF00221 Aromatic amino acid lyase AI20_02400 PF02801 Beta-ketoacyl synthase, C-terminal domain AI20_02400 PF00109 Beta-ketoacyl synthase, N-terminal domain AI20_02415 PF00109 Beta-ketoacyl synthase, N-terminal domain AI20_02415 PF02801 Beta-ketoacyl synthase, C-terminal domain AI20_02425 PF00994 Probable molybdopterin binding domain AI20_02435 PF06738 Putative threonine/serine exporter AI20_02440 PF12821 Threonine/Serine exporter, ThrE AI20_02445 PF00186 Dihydrofolate reductase AI20_02460 PF00571 CBS domain AI20_02460 PF00005 ABC transporter AI20_02465 PF00528 Binding-protein-dependent transport system inner membrane component AI20_02470 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AI20_02475 PF01507 Phosphoadenosine phosphosulfate reductase family AI20_02480 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AI20_02480 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AI20_02485 PF00175 Oxidoreductase NAD-binding domain AI20_02485 PF00667 FAD binding domain AI20_02485 PF00258 Flavodoxin AI20_02490 PF02567 Phenazine biosynthesis-like protein AI20_02495 PF00152 tRNA synthetases class II (D, K and N) AI20_02495 PF01336 OB-fold nucleic acid binding domain AI20_02500 PF00472 RF-1 domain AI20_02500 PF03462 PCRF domain AI20_02505 PF00672 HAMP domain AI20_02505 PF02743 Cache domain AI20_02505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_02510 PF03616 Sodium/glutamate symporter AI20_02515 PF00710 Asparaginase, N-terminal AI20_02515 PF17763 Glutaminase/Asparaginase C-terminal domain AI20_02520 PF07023 Protein of unknown function (DUF1315) AI20_02525 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AI20_02525 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AI20_02540 PF01343 Peptidase family S49 AI20_02545 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AI20_02545 PF07992 Pyridine nucleotide-disulphide oxidoreductase AI20_02560 PF00881 Nitroreductase family AI20_02565 PF12464 Maltose acetyltransferase AI20_02565 PF14602 Hexapeptide repeat of succinyl-transferase AI20_02570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AI20_02570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AI20_02580 PF00107 Zinc-binding dehydrogenase AI20_02580 PF08240 Alcohol dehydrogenase GroES-like domain AI20_02585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_02585 PF03466 LysR substrate binding domain AI20_02590 PF00367 phosphotransferase system, EIIB AI20_02590 PF02378 Phosphotransferase system, EIIC AI20_02590 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AI20_02595 PF00474 Sodium:solute symporter family AI20_02600 PF06196 Protein of unknown function (DUF997) AI20_02605 PF00289 Biotin carboxylase, N-terminal domain AI20_02605 PF02785 Biotin carboxylase C-terminal domain AI20_02605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AI20_02610 PF00364 Biotin-requiring enzyme AI20_02615 PF01220 Dehydroquinase class II AI20_02620 PF00501 AMP-binding enzyme AI20_02620 PF16177 Acetyl-coenzyme A synthetase N-terminus AI20_02620 PF13193 AMP-binding enzyme C-terminal domain AI20_02630 PF13188 PAS domain AI20_02630 PF03707 Bacterial signalling protein N terminal repeat AI20_02630 PF00563 EAL domain AI20_02630 PF00990 Diguanylate cyclase, GGDEF domain AI20_02650 PF02613 Nitrate reductase delta subunit AI20_02655 PF01568 Molydopterin dinucleotide binding domain AI20_02655 PF18364 Molybdopterin oxidoreductase N-terminal domain AI20_02655 PF00384 Molybdopterin oxidoreductase AI20_02660 PF03264 NapC/NirT cytochrome c family, N-terminal region AI20_02665 PF00072 Response regulator receiver domain AI20_02665 PF00486 Transcriptional regulatory protein, C terminal AI20_02675 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AI20_02680 PF00672 HAMP domain AI20_02680 PF01627 Hpt domain AI20_02680 PF00512 His Kinase A (phospho-acceptor) domain AI20_02680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_02680 PF00072 Response regulator receiver domain AI20_02690 PF00464 Serine hydroxymethyltransferase AI20_02705 PF03477 ATP cone domain AI20_02710 PF01872 RibD C-terminal domain AI20_02710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AI20_02715 PF00677 Lumazine binding domain AI20_02720 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AI20_02720 PF00925 GTP cyclohydrolase II AI20_02725 PF00885 6,7-dimethyl-8-ribityllumazine synthase AI20_02730 PF01029 NusB family AI20_02735 PF00586 AIR synthase related protein, N-terminal domain AI20_02735 PF02769 AIR synthase related protein, C-terminal domain AI20_02740 PF04608 Phosphatidylglycerophosphatase A AI20_02745 PF00005 ABC transporter AI20_02745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AI20_02750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AI20_02765 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AI20_02765 PF02780 Transketolase, C-terminal domain AI20_02765 PF02779 Transketolase, pyrimidine binding domain AI20_02770 PF00348 Polyprenyl synthetase AI20_02775 PF02609 Exonuclease VII small subunit AI20_02780 PF01618 MotA/TolQ/ExbB proton channel family AI20_02785 PF13677 Membrane MotB of proton-channel complex MotA/MotB AI20_02785 PF00691 OmpA family AI20_02790 PF01272 Transcription elongation factor, GreA/GreB, C-term AI20_02790 PF03449 Transcription elongation factor, N-terminal AI20_02800 PF01985 CRS1 / YhbY (CRM) domain AI20_02805 PF01728 FtsJ-like methyltransferase AI20_02810 PF01434 Peptidase family M41 AI20_02810 PF00004 ATPase family associated with various cellular activities (AAA) AI20_02810 PF06480 FtsH Extracellular AI20_02810 PF17862 AAA+ lid domain AI20_02815 PF00809 Pterin binding enzyme AI20_02820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AI20_02820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AI20_02820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AI20_02820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AI20_02825 PF00121 Triosephosphate isomerase AI20_02830 PF03840 Preprotein translocase SecG subunit AI20_02845 PF17384 RimP C-terminal SH3 domain AI20_02845 PF02576 RimP N-terminal domain AI20_02850 PF13184 NusA-like KH domain AI20_02850 PF00575 S1 RNA binding domain AI20_02850 PF08529 NusA N-terminal domain AI20_02855 PF08364 Bacterial translation initiation factor IF-2 associated region AI20_02855 PF00009 Elongation factor Tu GTP binding domain AI20_02855 PF11987 Translation-initiation factor 2 AI20_02855 PF04760 Translation initiation factor IF-2, N-terminal region AI20_02860 PF02033 Ribosome-binding factor A AI20_02865 PF16198 tRNA pseudouridylate synthase B C-terminal domain AI20_02865 PF01509 TruB family pseudouridylate synthase (N terminal domain) AI20_02865 PF09157 Pseudouridine synthase II TruB, C-terminal AI20_02870 PF00312 Ribosomal protein S15 AI20_02875 PF00013 KH domain AI20_02875 PF00575 S1 RNA binding domain AI20_02875 PF03725 3' exoribonuclease family, domain 2 AI20_02875 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AI20_02875 PF01138 3' exoribonuclease family, domain 1 AI20_02885 PF00563 EAL domain AI20_02885 PF00990 Diguanylate cyclase, GGDEF domain AI20_02885 PF03707 Bacterial signalling protein N terminal repeat AI20_02890 PF02635 DsrE/DsrF-like family AI20_02900 PF10415 Fumarase C C-terminus AI20_02900 PF00206 Lyase AI20_02905 PF03575 Peptidase family S51 AI20_02910 PF00072 Response regulator receiver domain AI20_02910 PF00196 Bacterial regulatory proteins, luxR family AI20_02915 PF00989 PAS fold AI20_02915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_02915 PF00512 His Kinase A (phospho-acceptor) domain AI20_02920 PF13247 4Fe-4S dicluster domain AI20_02925 PF03916 Polysulphide reductase, NrfD AI20_02930 PF01568 Molydopterin dinucleotide binding domain AI20_02930 PF00384 Molybdopterin oxidoreductase AI20_02930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AI20_02950 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AI20_02960 PF17969 L,D-transpeptidase C-terminal domain AI20_02960 PF03734 L,D-transpeptidase catalytic domain AI20_02970 PF01523 Putative modulator of DNA gyrase AI20_02980 PF01523 Putative modulator of DNA gyrase AI20_02985 PF00258 Flavodoxin AI20_02990 PF00589 Phage integrase family AI20_02990 PF02899 Phage integrase, N-terminal SAM-like domain AI20_02995 PF00990 Diguanylate cyclase, GGDEF domain AI20_03000 PF01741 Large-conductance mechanosensitive channel, MscL AI20_03010 PF01368 DHH family AI20_03010 PF02272 DHHA1 domain AI20_03010 PF17768 RecJ OB domain AI20_03015 PF13411 MerR HTH family regulatory protein AI20_03030 PF02508 Rnf-Nqr subunit, membrane protein AI20_03035 PF06821 Serine hydrolase AI20_03040 PF04055 Radical SAM superfamily AI20_03040 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AI20_03045 PF03099 Biotin/lipoate A/B protein ligase family AI20_03050 PF04359 Protein of unknown function (DUF493) AI20_03055 PF00768 D-alanyl-D-alanine carboxypeptidase AI20_03055 PF07943 Penicillin-binding protein 5, C-terminal domain AI20_03060 PF03330 Lytic transglycolase AI20_03060 PF05036 Sporulation related domain AI20_03065 PF13406 Transglycosylase SLT domain AI20_03070 PF01098 Cell cycle protein AI20_03075 PF03717 Penicillin-binding Protein dimerisation domain AI20_03075 PF00905 Penicillin binding protein transpeptidase domain AI20_03080 PF02590 Predicted SPOUT methyltransferase AI20_03090 PF01467 Cytidylyltransferase-like AI20_03105 PF00133 tRNA synthetases class I (I, L, M and V) AI20_03105 PF13603 Leucyl-tRNA synthetase, Domain 2 AI20_03105 PF08264 Anticodon-binding domain of tRNA AI20_03110 PF07295 Zinc-ribbon containing domain AI20_03115 PF00795 Carbon-nitrogen hydrolase AI20_03120 PF03471 Transporter associated domain AI20_03120 PF00571 CBS domain AI20_03125 PF02130 Uncharacterized protein family UPF0054 AI20_03130 PF02562 PhoH-like protein AI20_03135 PF04055 Radical SAM superfamily AI20_03135 PF00919 Uncharacterized protein family UPF0004 AI20_03135 PF01938 TRAM domain AI20_03140 PF01494 FAD binding domain AI20_03145 PF00857 Isochorismatase family AI20_03155 PF05230 MASE2 domain AI20_03155 PF00990 Diguanylate cyclase, GGDEF domain AI20_03170 PF13419 Haloacid dehalogenase-like hydrolase AI20_03180 PF07694 5TMR of 5TMR-LYT AI20_03180 PF00990 Diguanylate cyclase, GGDEF domain AI20_03190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AI20_03190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AI20_03200 PF09997 Predicted membrane protein (DUF2238) AI20_03205 PF09285 Elongation factor P, C-terminal AI20_03205 PF01132 Elongation factor P (EF-P) OB domain AI20_03205 PF08207 Elongation factor P (EF-P) KOW-like domain AI20_03215 PF00478 IMP dehydrogenase / GMP reductase domain AI20_03225 PF00512 His Kinase A (phospho-acceptor) domain AI20_03225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_03225 PF08521 Two-component sensor kinase N-terminal AI20_03230 PF00486 Transcriptional regulatory protein, C terminal AI20_03230 PF00072 Response regulator receiver domain AI20_03250 PF00501 AMP-binding enzyme AI20_03265 PF06224 Winged helix DNA-binding domain AI20_03285 PF02313 Fumarate reductase subunit D AI20_03290 PF02300 Fumarate reductase subunit C AI20_03295 PF13183 4Fe-4S dicluster domain AI20_03295 PF13085 2Fe-2S iron-sulfur cluster binding domain AI20_03300 PF00890 FAD binding domain AI20_03300 PF02910 Fumarate reductase flavoprotein C-term AI20_03305 PF02743 Cache domain AI20_03305 PF00672 HAMP domain AI20_03305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_03310 PF03009 Glycerophosphoryl diester phosphodiesterase family AI20_03315 PF12794 Mechanosensitive ion channel inner membrane domain 1 AI20_03315 PF00924 Mechanosensitive ion channel AI20_03315 PF12795 Mechanosensitive ion channel porin domain AI20_03325 PF01476 LysM domain AI20_03325 PF08525 Opacity-associated protein A N-terminal motif AI20_03325 PF01551 Peptidase family M23 AI20_03340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_03340 PF03466 LysR substrate binding domain AI20_03355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_03355 PF00672 HAMP domain AI20_03360 PF03466 LysR substrate binding domain AI20_03360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_03365 PF00905 Penicillin binding protein transpeptidase domain AI20_03365 PF17092 Penicillin-binding protein OB-like domain AI20_03365 PF00912 Transglycosylase AI20_03390 PF07660 Secretin and TonB N terminus short domain AI20_03390 PF03958 Bacterial type II/III secretion system short domain AI20_03390 PF00263 Bacterial type II and III secretion system protein AI20_03390 PF11741 AMIN domain AI20_03395 PF01202 Shikimate kinase AI20_03400 PF01761 3-dehydroquinate synthase AI20_03410 PF02086 D12 class N6 adenine-specific DNA methyltransferase AI20_03415 PF00834 Ribulose-phosphate 3 epimerase family AI20_03420 PF13419 Haloacid dehalogenase-like hydrolase AI20_03425 PF00579 tRNA synthetases class I (W and Y) AI20_03435 PF00117 Glutamine amidotransferase class-I AI20_03440 PF00202 Aminotransferase class-III AI20_03445 PF04958 Arginine N-succinyltransferase beta subunit AI20_03450 PF00171 Aldehyde dehydrogenase family AI20_03460 PF13419 Haloacid dehalogenase-like hydrolase AI20_03465 PF07690 Major Facilitator Superfamily AI20_03470 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AI20_03470 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AI20_03470 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AI20_03470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AI20_03470 PF10371 Domain of unknown function AI20_03490 PF00155 Aminotransferase class I and II AI20_03490 PF00392 Bacterial regulatory proteins, gntR family AI20_03500 PF12848 ABC transporter AI20_03500 PF00005 ABC transporter AI20_03515 PF00128 Alpha amylase, catalytic domain AI20_03515 PF16657 Maltogenic Amylase, C-terminal domain AI20_03535 PF01048 Phosphorylase superfamily AI20_03540 PF04973 Nicotinamide mononucleotide transporter AI20_03545 PF02080 TrkA-C domain AI20_03545 PF03600 Citrate transporter AI20_03590 PF01926 50S ribosome-binding GTPase AI20_03590 PF06071 Protein of unknown function (DUF933) AI20_03595 PF01195 Peptidyl-tRNA hydrolase AI20_03600 PF02872 5'-nucleotidase, C-terminal domain AI20_03600 PF00149 Calcineurin-like phosphoesterase AI20_03605 PF14572 Phosphoribosyl synthetase-associated domain AI20_03605 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AI20_03620 PF03550 Outer membrane lipoprotein LolB AI20_03625 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AI20_03625 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AI20_03625 PF01488 Shikimate / quinate 5-dehydrogenase AI20_03630 PF03462 PCRF domain AI20_03630 PF00472 RF-1 domain AI20_03635 PF13847 Methyltransferase domain AI20_03635 PF17827 PrmC N-terminal domain AI20_03645 PF13369 Transglutaminase-like superfamily AI20_03650 PF00793 DAHP synthetase I family AI20_03655 PF00375 Sodium:dicarboxylate symporter family AI20_03660 PF01228 Glycine radical AI20_03665 PF03167 Uracil DNA glycosylase superfamily AI20_03680 PF00923 Transaldolase/Fructose-6-phosphate aldolase AI20_03685 PF01235 Sodium:alanine symporter family AI20_03690 PF11992 Domain of unknown function (DUF3488) AI20_03690 PF01841 Transglutaminase-like superfamily AI20_03690 PF13559 Domain of unknown function (DUF4129) AI20_03700 PF17863 AAA lid domain AI20_03700 PF07726 ATPase family associated with various cellular activities (AAA) AI20_03705 PF00144 Beta-lactamase AI20_03710 PF00854 POT family AI20_03715 PF03652 Holliday junction resolvase AI20_03720 PF02622 Uncharacterized ACR, COG1678 AI20_03725 PF00672 HAMP domain AI20_03725 PF12729 Four helix bundle sensory module for signal transduction AI20_03725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_03730 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AI20_03730 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AI20_03735 PF04452 RNA methyltransferase AI20_03740 PF04231 Endonuclease I AI20_03745 PF10263 SprT-like family AI20_03750 PF00438 S-adenosylmethionine synthetase, N-terminal domain AI20_03750 PF02773 S-adenosylmethionine synthetase, C-terminal domain AI20_03750 PF02772 S-adenosylmethionine synthetase, central domain AI20_03755 PF00456 Transketolase, thiamine diphosphate binding domain AI20_03755 PF02779 Transketolase, pyrimidine binding domain AI20_03755 PF02780 Transketolase, C-terminal domain AI20_03770 PF01042 Endoribonuclease L-PSP AI20_03775 PF03702 Anhydro-N-acetylmuramic acid kinase AI20_03785 PF01551 Peptidase family M23 AI20_03785 PF01476 LysM domain AI20_03785 PF08525 Opacity-associated protein A N-terminal motif AI20_03790 PF00579 tRNA synthetases class I (W and Y) AI20_03795 PF01204 Trehalase AI20_03805 PF01161 Phosphatidylethanolamine-binding protein AI20_03815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_03815 PF03466 LysR substrate binding domain AI20_03825 PF00155 Aminotransferase class I and II AI20_03830 PF07690 Major Facilitator Superfamily AI20_03835 PF03466 LysR substrate binding domain AI20_03835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_03840 PF00106 short chain dehydrogenase AI20_03845 PF01343 Peptidase family S49 AI20_03845 PF08496 Peptidase family S49 N-terminal AI20_03850 PF04996 Succinylarginine dihydrolase AI20_03855 PF01131 DNA topoisomerase AI20_03855 PF01396 Topoisomerase DNA binding C4 zinc finger AI20_03855 PF01751 Toprim domain AI20_03855 PF08272 Topoisomerase I zinc-ribbon-like AI20_03870 PF08447 PAS fold AI20_03870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_03875 PF02838 Glycosyl hydrolase family 20, domain 2 AI20_03875 PF00728 Glycosyl hydrolase family 20, catalytic domain AI20_03880 PF01869 BadF/BadG/BcrA/BcrD ATPase family AI20_03890 PF00005 ABC transporter AI20_03890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AI20_03895 PF00005 ABC transporter AI20_03895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AI20_03900 PF12911 N-terminal TM domain of oligopeptide transport permease C AI20_03900 PF00528 Binding-protein-dependent transport system inner membrane component AI20_03905 PF00528 Binding-protein-dependent transport system inner membrane component AI20_03910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AI20_03915 PF00512 His Kinase A (phospho-acceptor) domain AI20_03915 PF09308 LuxQ, periplasmic AI20_03915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_03915 PF00072 Response regulator receiver domain AI20_03935 PF10725 Protein of unknown function (DUF2517) AI20_03955 PF05114 Protein of unknown function (DUF692) AI20_03975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_03975 PF13426 PAS domain AI20_03975 PF08447 PAS fold AI20_03990 PF04632 Fusaric acid resistance protein family AI20_03995 PF03453 MoeA N-terminal region (domain I and II) AI20_03995 PF00994 Probable molybdopterin binding domain AI20_03995 PF03454 MoeA C-terminal region (domain IV) AI20_04000 PF12804 MobA-like NTP transferase domain AI20_04005 PF00005 ABC transporter AI20_04010 PF00528 Binding-protein-dependent transport system inner membrane component AI20_04015 PF12849 PBP superfamily domain AI20_04020 PF02954 Bacterial regulatory protein, Fis family AI20_04020 PF00072 Response regulator receiver domain AI20_04020 PF00158 Sigma-54 interaction domain AI20_04025 PF00512 His Kinase A (phospho-acceptor) domain AI20_04025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_04025 PF00989 PAS fold AI20_04030 PF12727 PBP superfamily domain AI20_04030 PF12728 Helix-turn-helix domain AI20_04035 PF02634 FdhD/NarQ family AI20_04065 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AI20_04065 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AI20_04065 PF12838 4Fe-4S dicluster domain AI20_04065 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AI20_04065 PF00384 Molybdopterin oxidoreductase AI20_04065 PF01568 Molydopterin dinucleotide binding domain AI20_04065 PF01568 Molydopterin dinucleotide binding domain AI20_04065 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AI20_04065 PF12838 4Fe-4S dicluster domain AI20_04065 PF00384 Molybdopterin oxidoreductase AI20_04070 PF13247 4Fe-4S dicluster domain AI20_04080 PF03949 Malic enzyme, NAD binding domain AI20_04080 PF00390 Malic enzyme, N-terminal domain AI20_04095 PF00860 Permease family AI20_04100 PF00497 Bacterial extracellular solute-binding proteins, family 3 AI20_04105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_04105 PF00672 HAMP domain AI20_04115 PF10282 Lactonase, 7-bladed beta-propeller AI20_04125 PF12795 Mechanosensitive ion channel porin domain AI20_04125 PF00924 Mechanosensitive ion channel AI20_04125 PF12794 Mechanosensitive ion channel inner membrane domain 1 AI20_04130 PF00224 Pyruvate kinase, barrel domain AI20_04130 PF02887 Pyruvate kinase, alpha/beta domain AI20_04140 PF04151 Bacterial pre-peptidase C-terminal domain AI20_04140 PF04389 Peptidase family M28 AI20_04145 PF00999 Sodium/hydrogen exchanger family AI20_04145 PF02254 TrkA-N domain AI20_04155 PF04381 Putative exonuclease, RdgC AI20_04165 PF12320 Type 5 capsule protein repressor C-terminal domain AI20_04165 PF00149 Calcineurin-like phosphoesterase AI20_04170 PF13476 AAA domain AI20_04180 PF01292 Prokaryotic cytochrome b561 AI20_04185 PF00990 Diguanylate cyclase, GGDEF domain AI20_04185 PF00072 Response regulator receiver domain AI20_04190 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AI20_04195 PF02896 PEP-utilising enzyme, TIM barrel domain AI20_04195 PF00391 PEP-utilising enzyme, mobile domain AI20_04195 PF05524 PEP-utilising enzyme, N-terminal AI20_04200 PF00381 PTS HPr component phosphorylation site AI20_04205 PF00291 Pyridoxal-phosphate dependent enzyme AI20_04210 PF10431 C-terminal, D2-small domain, of ClpB protein AI20_04210 PF02861 Clp amino terminal domain, pathogenicity island component AI20_04210 PF17871 AAA lid domain AI20_04210 PF07724 AAA domain (Cdc48 subfamily) AI20_04210 PF00004 ATPase family associated with various cellular activities (AAA) AI20_04220 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AI20_04220 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AI20_04225 PF00672 HAMP domain AI20_04225 PF01966 HD domain AI20_04230 PF01980 tRNA-methyltransferase O AI20_04230 PF18389 TrmO C-terminal domain AI20_04250 PF00664 ABC transporter transmembrane region AI20_04250 PF00005 ABC transporter AI20_04255 PF00664 ABC transporter transmembrane region AI20_04255 PF00005 ABC transporter AI20_04270 PF00486 Transcriptional regulatory protein, C terminal AI20_04270 PF00072 Response regulator receiver domain AI20_04280 PF03737 Aldolase/RraA AI20_04295 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AI20_04300 PF00588 SpoU rRNA Methylase family AI20_04305 PF00742 Homoserine dehydrogenase AI20_04305 PF01842 ACT domain AI20_04305 PF00696 Amino acid kinase family AI20_04305 PF13840 ACT domain AI20_04305 PF03447 Homoserine dehydrogenase, NAD binding domain AI20_04310 PF00288 GHMP kinases N terminal domain AI20_04310 PF08544 GHMP kinases C terminal AI20_04315 PF14821 Threonine synthase N terminus AI20_04315 PF00291 Pyridoxal-phosphate dependent enzyme AI20_04320 PF13474 SnoaL-like domain AI20_04335 PF00005 ABC transporter AI20_04335 PF12848 ABC transporter AI20_04350 PF01048 Phosphorylase superfamily AI20_04365 PF01627 Hpt domain AI20_04365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_04365 PF00497 Bacterial extracellular solute-binding proteins, family 3 AI20_04365 PF00072 Response regulator receiver domain AI20_04365 PF00989 PAS fold AI20_04365 PF00512 His Kinase A (phospho-acceptor) domain AI20_04370 PF00563 EAL domain AI20_04370 PF01590 GAF domain AI20_04370 PF00360 Phytochrome region AI20_04370 PF00990 Diguanylate cyclase, GGDEF domain AI20_04375 PF00512 His Kinase A (phospho-acceptor) domain AI20_04375 PF00672 HAMP domain AI20_04375 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AI20_04375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_04375 PF01627 Hpt domain AI20_04375 PF00072 Response regulator receiver domain AI20_04380 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AI20_04385 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AI20_04385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AI20_04390 PF02690 Na+/Pi-cotransporter AI20_04400 PF13520 Amino acid permease AI20_04410 PF00324 Amino acid permease AI20_04420 PF00202 Aminotransferase class-III AI20_04425 PF00171 Aldehyde dehydrogenase family AI20_04430 PF01381 Helix-turn-helix AI20_04430 PF07883 Cupin domain AI20_04435 PF01266 FAD dependent oxidoreductase AI20_04450 PF00816 H-NS histone family AI20_04455 PF00793 DAHP synthetase I family AI20_04460 PF08021 Siderophore-interacting FAD-binding domain AI20_04460 PF04954 Siderophore-interacting protein AI20_04465 PF02321 Outer membrane efflux protein AI20_04470 PF00005 ABC transporter AI20_04470 PF02687 FtsX-like permease family AI20_04470 PF12704 MacB-like periplasmic core domain AI20_04475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AI20_04485 PF02833 DHHA2 domain AI20_04485 PF01368 DHH family AI20_04490 PF02463 RecF/RecN/SMC N terminal domain AI20_04495 PF01513 ATP-NAD kinase AI20_04500 PF01025 GrpE AI20_04505 PF00012 Hsp70 protein AI20_04510 PF00684 DnaJ central domain AI20_04510 PF00226 DnaJ domain AI20_04510 PF01556 DnaJ C terminal domain AI20_04515 PF02264 LamB porin AI20_04515 PF11471 Maltoporin periplasmic N-terminal extension AI20_04520 PF00294 pfkB family carbohydrate kinase AI20_04525 PF02378 Phosphotransferase system, EIIC AI20_04525 PF00367 phosphotransferase system, EIIB AI20_04530 PF00251 Glycosyl hydrolases family 32 N-terminal domain AI20_04530 PF08244 Glycosyl hydrolases family 32 C terminal AI20_04535 PF00356 Bacterial regulatory proteins, lacI family AI20_04535 PF13407 Periplasmic binding protein domain AI20_04540 PF02308 MgtC family AI20_04555 PF01022 Bacterial regulatory protein, arsR family AI20_04560 PF04143 Sulphur transport AI20_04575 PF00873 AcrB/AcrD/AcrF family AI20_04580 PF00990 Diguanylate cyclase, GGDEF domain AI20_04580 PF03707 Bacterial signalling protein N terminal repeat AI20_04580 PF00563 EAL domain AI20_04585 PF10437 Bacterial lipoate protein ligase C-terminus AI20_04585 PF03099 Biotin/lipoate A/B protein ligase family AI20_04600 PF00873 AcrB/AcrD/AcrF family AI20_04605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AI20_04605 PF00529 HlyD membrane-fusion protein of T1SS AI20_04620 PF00873 AcrB/AcrD/AcrF family AI20_04625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AI20_04630 PF03372 Endonuclease/Exonuclease/phosphatase family AI20_04645 PF00011 Hsp20/alpha crystallin family AI20_04650 PF07690 Major Facilitator Superfamily AI20_04655 PF02424 ApbE family AI20_04660 PF00127 Copper binding proteins, plastocyanin/azurin family AI20_04675 PF01156 Inosine-uridine preferring nucleoside hydrolase AI20_04685 PF00034 Cytochrome c AI20_04685 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AI20_04695 PF06481 COX Aromatic Rich Motif AI20_04695 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AI20_04700 PF00115 Cytochrome C and Quinol oxidase polypeptide I AI20_04705 PF00510 Cytochrome c oxidase subunit III AI20_04710 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AI20_04715 PF01040 UbiA prenyltransferase family AI20_04720 PF07690 Major Facilitator Superfamily AI20_04730 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AI20_04735 PF00528 Binding-protein-dependent transport system inner membrane component AI20_04740 PF00005 ABC transporter AI20_04745 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AI20_04755 PF07670 Nucleoside recognition AI20_04755 PF07662 Na+ dependent nucleoside transporter C-terminus AI20_04755 PF01773 Na+ dependent nucleoside transporter N-terminus AI20_04775 PF04307 LexA-binding, inner membrane-associated putative hydrolase AI20_04810 PF00290 Tryptophan synthase alpha chain AI20_04815 PF00291 Pyridoxal-phosphate dependent enzyme AI20_04820 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AI20_04820 PF00218 Indole-3-glycerol phosphate synthase AI20_04825 PF02885 Glycosyl transferase family, helical bundle domain AI20_04825 PF00591 Glycosyl transferase family, a/b domain AI20_04830 PF02885 Glycosyl transferase family, helical bundle domain AI20_04830 PF00117 Glutamine amidotransferase class-I AI20_04830 PF00591 Glycosyl transferase family, a/b domain AI20_04835 PF00425 chorismate binding enzyme AI20_04835 PF04715 Anthranilate synthase component I, N terminal region AI20_04840 PF02811 PHP domain AI20_04845 PF01300 Telomere recombination AI20_04850 PF02616 Segregation and condensation protein ScpA AI20_04855 PF04079 Segregation and condensation complex subunit ScpB AI20_04860 PF01479 S4 domain AI20_04860 PF00849 RNA pseudouridylate synthase AI20_04880 PF08361 MAATS-type transcriptional repressor, C-terminal region AI20_04880 PF00440 Bacterial regulatory proteins, tetR family AI20_04885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AI20_04885 PF00529 HlyD membrane-fusion protein of T1SS AI20_04890 PF00873 AcrB/AcrD/AcrF family AI20_04895 PF02321 Outer membrane efflux protein AI20_04900 PF16363 GDP-mannose 4,6 dehydratase AI20_04905 PF00483 Nucleotidyl transferase AI20_04910 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AI20_04950 PF01050 Mannose-6-phosphate isomerase AI20_04950 PF00483 Nucleotidyl transferase AI20_04955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AI20_04955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AI20_04955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AI20_04955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AI20_04960 PF02397 Bacterial sugar transferase AI20_04965 PF04321 RmlD substrate binding domain AI20_04970 PF02706 Chain length determinant protein AI20_04980 PF04337 Protein of unknown function, DUF480 AI20_04985 PF00176 SNF2 family N-terminal domain AI20_04985 PF00271 Helicase conserved C-terminal domain AI20_04985 PF04434 SWIM zinc finger AI20_04990 PF05472 DNA replication terminus site-binding protein (Ter protein) AI20_05000 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AI20_05005 PF00676 Dehydrogenase E1 component AI20_05010 PF02780 Transketolase, C-terminal domain AI20_05010 PF02779 Transketolase, pyrimidine binding domain AI20_05015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AI20_05015 PF02817 e3 binding domain AI20_05015 PF00364 Biotin-requiring enzyme AI20_05020 PF00313 'Cold-shock' DNA-binding domain AI20_05045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AI20_05050 PF00892 EamA-like transporter family AI20_05055 PF08220 DeoR-like helix-turn-helix domain AI20_05055 PF00455 DeoR C terminal sensor domain AI20_05065 PF04055 Radical SAM superfamily AI20_05070 PF00923 Transaldolase/Fructose-6-phosphate aldolase AI20_05080 PF01966 HD domain AI20_05080 PF11871 Domain of unknown function (DUF3391) AI20_05085 PF00849 RNA pseudouridylate synthase AI20_05085 PF01479 S4 domain AI20_05095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AI20_05100 PF12850 Calcineurin-like phosphoesterase superfamily domain AI20_05115 PF13144 Chaperone for flagella basal body P-ring formation AI20_05120 PF00072 Response regulator receiver domain AI20_05120 PF01584 CheW-like domain AI20_05125 PF01739 CheR methyltransferase, SAM binding domain AI20_05125 PF03705 CheR methyltransferase, all-alpha domain AI20_05130 PF00460 Flagella basal body rod protein AI20_05135 PF00460 Flagella basal body rod protein AI20_05135 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AI20_05145 PF00460 Flagella basal body rod protein AI20_05145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AI20_05145 PF07559 Flagellar basal body protein FlaE AI20_05150 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AI20_05150 PF00460 Flagella basal body rod protein AI20_05155 PF00460 Flagella basal body rod protein AI20_05155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AI20_05160 PF02107 Flagellar L-ring protein AI20_05165 PF02119 Flagellar P-ring protein AI20_05170 PF10135 Rod binding protein AI20_05170 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AI20_05175 PF00460 Flagella basal body rod protein AI20_05175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AI20_05180 PF00669 Bacterial flagellin N-terminal helical region AI20_05185 PF03448 MgtE intracellular N domain AI20_05185 PF01769 Divalent cation transporter AI20_05185 PF00571 CBS domain AI20_05190 PF02541 Ppx/GppA phosphatase family AI20_05195 PF13089 Polyphosphate kinase N-terminal domain AI20_05195 PF17941 Polyphosphate kinase C-terminal domain 1 AI20_05195 PF13090 Polyphosphate kinase C-terminal domain 2 AI20_05195 PF02503 Polyphosphate kinase middle domain AI20_05200 PF01842 ACT domain AI20_05210 PF02954 Bacterial regulatory protein, Fis family AI20_05210 PF00158 Sigma-54 interaction domain AI20_05210 PF00072 Response regulator receiver domain AI20_05215 PF00512 His Kinase A (phospho-acceptor) domain AI20_05215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_05215 PF00989 PAS fold AI20_05220 PF00158 Sigma-54 interaction domain AI20_05220 PF02954 Bacterial regulatory protein, Fis family AI20_05225 PF01784 NIF3 (NGG1p interacting factor 3) AI20_05230 PF00551 Formyl transferase AI20_05235 PF02769 AIR synthase related protein, C-terminal domain AI20_05235 PF00586 AIR synthase related protein, N-terminal domain AI20_05250 PF00308 Bacterial dnaA protein AI20_05255 PF00463 Isocitrate lyase family AI20_05260 PF01274 Malate synthase AI20_05280 PF14437 MafB19-like deaminase AI20_05285 PF00528 Binding-protein-dependent transport system inner membrane component AI20_05290 PF00528 Binding-protein-dependent transport system inner membrane component AI20_05300 PF01895 PhoU domain AI20_05320 PF00571 CBS domain AI20_05320 PF03471 Transporter associated domain AI20_05320 PF01595 Cyclin M transmembrane N-terminal domain AI20_05335 PF13520 Amino acid permease AI20_05340 PF04116 Fatty acid hydroxylase superfamily AI20_05355 PF00005 ABC transporter AI20_05360 PF00528 Binding-protein-dependent transport system inner membrane component AI20_05365 PF00497 Bacterial extracellular solute-binding proteins, family 3 AI20_05370 PF07690 Major Facilitator Superfamily AI20_05375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_05375 PF07730 Histidine kinase AI20_05375 PF05231 MASE1 AI20_05380 PF00196 Bacterial regulatory proteins, luxR family AI20_05380 PF00072 Response regulator receiver domain AI20_05385 PF01272 Transcription elongation factor, GreA/GreB, C-term AI20_05385 PF14760 Rnk N-terminus AI20_05405 PF00245 Alkaline phosphatase AI20_05410 PF00245 Alkaline phosphatase AI20_05415 PF01926 50S ribosome-binding GTPase AI20_05420 PF07690 Major Facilitator Superfamily AI20_05425 PF00850 Histone deacetylase domain AI20_05435 PF06733 DEAD_2 AI20_05435 PF13307 Helicase C-terminal domain AI20_05440 PF13609 Gram-negative porin AI20_05450 PF00155 Aminotransferase class I and II AI20_05455 PF05872 Bacterial protein of unknown function (DUF853) AI20_05470 PF03772 Competence protein AI20_05470 PF00753 Metallo-beta-lactamase superfamily AI20_05475 PF00664 ABC transporter transmembrane region AI20_05475 PF00005 ABC transporter AI20_05480 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AI20_05485 PF03966 Trm112p-like protein AI20_05490 PF02348 Cytidylyltransferase AI20_05495 PF00072 Response regulator receiver domain AI20_05495 PF00196 Bacterial regulatory proteins, luxR family AI20_05500 PF02151 UvrB/uvrC motif AI20_05500 PF08459 UvrC Helix-hairpin-helix N-terminal AI20_05500 PF01541 GIY-YIG catalytic domain AI20_05505 PF01066 CDP-alcohol phosphatidyltransferase AI20_05525 PF02899 Phage integrase, N-terminal SAM-like domain AI20_05525 PF00589 Phage integrase family AI20_05565 PF00176 SNF2 family N-terminal domain AI20_05565 PF00271 Helicase conserved C-terminal domain AI20_05585 PF00589 Phage integrase family AI20_05585 PF02899 Phage integrase, N-terminal SAM-like domain AI20_05610 PF02661 Fic/DOC family AI20_05610 PF13784 Fic/DOC family N-terminal AI20_05620 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB AI20_05625 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) AI20_05645 PF13247 4Fe-4S dicluster domain AI20_05645 PF00037 4Fe-4S binding domain AI20_05650 PF03916 Polysulphide reductase, NrfD AI20_05655 PF00149 Calcineurin-like phosphoesterase AI20_05665 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AI20_05670 PF09190 DALR domain AI20_05670 PF01406 tRNA synthetases class I (C) catalytic domain AI20_05685 PF13185 GAF domain AI20_05685 PF00990 Diguanylate cyclase, GGDEF domain AI20_05715 PF01169 Uncharacterized protein family UPF0016 AI20_05720 PF01253 Translation initiation factor SUI1 AI20_05730 PF07670 Nucleoside recognition AI20_05730 PF02421 Ferrous iron transport protein B AI20_05730 PF07664 Ferrous iron transport protein B C terminus AI20_05745 PF00483 Nucleotidyl transferase AI20_05750 PF00437 Type II/IV secretion system protein AI20_05760 PF00072 Response regulator receiver domain AI20_05760 PF00497 Bacterial extracellular solute-binding proteins, family 3 AI20_05760 PF00512 His Kinase A (phospho-acceptor) domain AI20_05760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_05760 PF01627 Hpt domain AI20_05760 PF00989 PAS fold AI20_05765 PF01032 FecCD transport family AI20_05770 PF00005 ABC transporter AI20_05775 PF00793 DAHP synthetase I family AI20_05780 PF01219 Prokaryotic diacylglycerol kinase AI20_05785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AI20_05785 PF01842 ACT domain AI20_05785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AI20_05790 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AI20_05795 PF01812 5-formyltetrahydrofolate cyclo-ligase family AI20_05805 PF01113 Dihydrodipicolinate reductase, N-terminus AI20_05805 PF05173 Dihydrodipicolinate reductase, C-terminus AI20_05810 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AI20_05810 PF00117 Glutamine amidotransferase class-I AI20_05815 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AI20_05815 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AI20_05815 PF02142 MGS-like domain AI20_05820 PF08502 LeuA allosteric (dimerisation) domain AI20_05820 PF00682 HMGL-like AI20_05835 PF07759 Protein of unknown function (DUF1615) AI20_05860 PF13302 Acetyltransferase (GNAT) domain AI20_05865 PF00271 Helicase conserved C-terminal domain AI20_05865 PF00270 DEAD/DEAH box helicase AI20_05875 PF14521 Lysine-specific metallo-endopeptidase AI20_05890 PF09278 MerR, DNA binding AI20_05890 PF00376 MerR family regulatory protein AI20_05905 PF07992 Pyridine nucleotide-disulphide oxidoreductase AI20_05905 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AI20_05910 PF01645 Conserved region in glutamate synthase AI20_05910 PF04898 Glutamate synthase central domain AI20_05910 PF00310 Glutamine amidotransferases class-II AI20_05910 PF01493 GXGXG motif AI20_05915 PF04055 Radical SAM superfamily AI20_05915 PF16199 Radical_SAM C-terminal domain AI20_05920 PF00005 ABC transporter AI20_05920 PF00664 ABC transporter transmembrane region AI20_05920 PF03412 Peptidase C39 family AI20_05970 PF00324 Amino acid permease AI20_05980 PF03618 Kinase/pyrophosphorylase AI20_05985 PF02896 PEP-utilising enzyme, TIM barrel domain AI20_05985 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AI20_05985 PF00391 PEP-utilising enzyme, mobile domain AI20_06005 PF01483 Proprotein convertase P-domain AI20_06005 PF00082 Subtilase family AI20_06030 PF03180 NLPA lipoprotein AI20_06035 PF01569 PAP2 superfamily AI20_06040 PF11890 Domain of unknown function (DUF3410) AI20_06040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AI20_06040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AI20_06045 PF02774 Semialdehyde dehydrogenase, dimerisation domain AI20_06045 PF01118 Semialdehyde dehydrogenase, NAD binding domain AI20_06055 PF01416 tRNA pseudouridine synthase AI20_06060 PF01039 Carboxyl transferase domain AI20_06060 PF17848 Acetyl-coA carboxylase zinc finger domain AI20_06065 PF08245 Mur ligase middle domain AI20_06065 PF02875 Mur ligase family, glutamate ligase domain AI20_06070 PF05036 Sporulation related domain AI20_06075 PF04358 DsrC like protein AI20_06080 PF12805 FUSC-like inner membrane protein yccS AI20_06085 PF01027 Inhibitor of apoptosis-promoting Bax1 AI20_06105 PF00884 Sulfatase AI20_06105 PF08019 Phosphoethanolamine transferase EptA/EptB AI20_06110 PF03706 Lysylphosphatidylglycerol synthase TM region AI20_06110 PF09924 Uncharacterised conserved protein (DUF2156) AI20_06120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_06120 PF08447 PAS fold AI20_06125 PF00563 EAL domain AI20_06125 PF00990 Diguanylate cyclase, GGDEF domain AI20_06125 PF13426 PAS domain AI20_06130 PF00849 RNA pseudouridylate synthase AI20_06140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AI20_06145 PF04209 homogentisate 1,2-dioxygenase AI20_06155 PF02798 Glutathione S-transferase, N-terminal domain AI20_06155 PF14497 Glutathione S-transferase, C-terminal domain AI20_06165 PF00733 Asparagine synthase AI20_06165 PF13537 Glutamine amidotransferase domain AI20_06175 PF02254 TrkA-N domain AI20_06175 PF00999 Sodium/hydrogen exchanger family AI20_06180 PF13344 Haloacid dehalogenase-like hydrolase AI20_06185 PF00962 Adenosine/AMP deaminase AI20_06190 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AI20_06195 PF03741 Integral membrane protein TerC family AI20_06195 PF03471 Transporter associated domain AI20_06205 PF02913 FAD linked oxidases, C-terminal domain AI20_06205 PF13183 4Fe-4S dicluster domain AI20_06205 PF01565 FAD binding domain AI20_06215 PF03061 Thioesterase superfamily AI20_06220 PF00271 Helicase conserved C-terminal domain AI20_06220 PF00270 DEAD/DEAH box helicase AI20_06220 PF03880 DbpA RNA binding domain AI20_06230 PF03553 Na+/H+ antiporter family AI20_06230 PF13726 Na+-H+ antiporter family AI20_06235 PF00929 Exonuclease AI20_06240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_06240 PF00672 HAMP domain AI20_06240 PF12729 Four helix bundle sensory module for signal transduction AI20_06245 PF18393 MotY N-terminal domain AI20_06245 PF00691 OmpA family AI20_06250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AI20_06255 PF10576 Iron-sulfur binding domain of endonuclease III AI20_06255 PF00633 Helix-hairpin-helix motif AI20_06255 PF00730 HhH-GPD superfamily base excision DNA repair protein AI20_06260 PF02508 Rnf-Nqr subunit, membrane protein AI20_06265 PF04205 FMN-binding domain AI20_06270 PF03116 NQR2, RnfD, RnfE family AI20_06275 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AI20_06275 PF12838 4Fe-4S dicluster domain AI20_06275 PF10531 SLBB domain AI20_06275 PF13375 RnfC Barrel sandwich hybrid domain AI20_06280 PF04060 Putative Fe-S cluster AI20_06285 PF02508 Rnf-Nqr subunit, membrane protein AI20_06290 PF00892 EamA-like transporter family AI20_06295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_06295 PF13426 PAS domain AI20_06295 PF08447 PAS fold AI20_06305 PF12241 Trans-2-enoyl-CoA reductase catalytic region AI20_06305 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AI20_06305 PF07055 Enoyl reductase FAD binding domain AI20_06310 PF03606 C4-dicarboxylate anaerobic carrier AI20_06315 PF12794 Mechanosensitive ion channel inner membrane domain 1 AI20_06315 PF12795 Mechanosensitive ion channel porin domain AI20_06315 PF00924 Mechanosensitive ion channel AI20_06320 PF00155 Aminotransferase class I and II AI20_06330 PF00462 Glutaredoxin AI20_06335 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AI20_06340 PF00271 Helicase conserved C-terminal domain AI20_06340 PF04851 Type III restriction enzyme, res subunit AI20_06345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AI20_06345 PF00529 HlyD membrane-fusion protein of T1SS AI20_06350 PF11742 Protein of unknown function (DUF3302) AI20_06355 PF02554 Carbon starvation protein CstA AI20_06360 PF00072 Response regulator receiver domain AI20_06360 PF04397 LytTr DNA-binding domain AI20_06365 PF06580 Histidine kinase AI20_06365 PF07694 5TMR of 5TMR-LYT AI20_06370 PF01966 HD domain AI20_06375 PF00171 Aldehyde dehydrogenase family AI20_06375 PF00465 Iron-containing alcohol dehydrogenase AI20_06385 PF01914 MarC family integral membrane protein AI20_06390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AI20_06395 PF00528 Binding-protein-dependent transport system inner membrane component AI20_06400 PF12911 N-terminal TM domain of oligopeptide transport permease C AI20_06400 PF00528 Binding-protein-dependent transport system inner membrane component AI20_06405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AI20_06405 PF00005 ABC transporter AI20_06410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AI20_06410 PF00005 ABC transporter AI20_06415 PF03741 Integral membrane protein TerC family AI20_06420 PF01168 Alanine racemase, N-terminal domain AI20_06420 PF00842 Alanine racemase, C-terminal domain AI20_06430 PF00375 Sodium:dicarboxylate symporter family AI20_06445 PF01979 Amidohydrolase family AI20_06455 PF00672 HAMP domain AI20_06455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_06460 PF01230 HIT domain AI20_06495 PF13721 SecD export protein N-terminal TM region AI20_06495 PF07549 SecD/SecF GG Motif AI20_06495 PF02355 Protein export membrane protein AI20_06500 PF07549 SecD/SecF GG Motif AI20_06500 PF02355 Protein export membrane protein AI20_06505 PF13426 PAS domain AI20_06505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_06505 PF08447 PAS fold AI20_06515 PF05661 Protein of unknown function (DUF808) AI20_06520 PF08439 Oligopeptidase F AI20_06520 PF01432 Peptidase family M3 AI20_06525 PF08439 Oligopeptidase F AI20_06525 PF01432 Peptidase family M3 AI20_06530 PF00860 Permease family AI20_06535 PF05728 Uncharacterised protein family (UPF0227) AI20_06540 PF07992 Pyridine nucleotide-disulphide oxidoreductase AI20_06565 PF01906 Putative heavy-metal-binding AI20_06575 PF02016 LD-carboxypeptidase N-terminal domain AI20_06575 PF17676 LD-carboxypeptidase C-terminal domain AI20_06580 PF00884 Sulfatase AI20_06590 PF00696 Amino acid kinase family AI20_06590 PF01842 ACT domain AI20_06595 PF00583 Acetyltransferase (GNAT) family AI20_06595 PF00696 Amino acid kinase family AI20_06600 PF01625 Peptide methionine sulfoxide reductase AI20_06620 PF00561 alpha/beta hydrolase fold AI20_06625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_06625 PF03466 LysR substrate binding domain AI20_06630 PF02652 L-lactate permease AI20_06635 PF02754 Cysteine-rich domain AI20_06640 PF11870 Domain of unknown function (DUF3390) AI20_06640 PF13183 4Fe-4S dicluster domain AI20_06640 PF02589 LUD domain AI20_06645 PF02589 LUD domain AI20_06650 PF01565 FAD binding domain AI20_06650 PF02913 FAD linked oxidases, C-terminal domain AI20_06665 PF00005 ABC transporter AI20_06675 PF03600 Citrate transporter AI20_06685 PF07690 Major Facilitator Superfamily AI20_06705 PF01593 Flavin containing amine oxidoreductase AI20_06710 PF03239 Iron permease FTR1 family AI20_06735 PF13533 Biotin-lipoyl like AI20_06750 PF01740 STAS domain AI20_06750 PF00916 Sulfate permease family AI20_06770 PF01168 Alanine racemase, N-terminal domain AI20_06770 PF00842 Alanine racemase, C-terminal domain AI20_06775 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AI20_06775 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AI20_06780 PF13247 4Fe-4S dicluster domain AI20_06785 PF03916 Polysulphide reductase, NrfD AI20_06790 PF00374 Nickel-dependent hydrogenase AI20_06795 PF01750 Hydrogenase maturation protease AI20_06800 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE AI20_06805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AI20_06810 PF00528 Binding-protein-dependent transport system inner membrane component AI20_06815 PF12911 N-terminal TM domain of oligopeptide transport permease C AI20_06815 PF00528 Binding-protein-dependent transport system inner membrane component AI20_06820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AI20_06820 PF00005 ABC transporter AI20_06825 PF00005 ABC transporter AI20_06825 PF08402 TOBE domain AI20_06830 PF02492 CobW/HypB/UreG, nucleotide-binding domain AI20_06840 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AI20_06845 PF02769 AIR synthase related protein, C-terminal domain AI20_06845 PF00586 AIR synthase related protein, N-terminal domain AI20_06850 PF01924 Hydrogenase formation hypA family AI20_06855 PF01455 HupF/HypC family AI20_06860 PF07503 HypF finger AI20_06860 PF01300 Telomere recombination AI20_06860 PF00708 Acylphosphatase AI20_06860 PF17788 HypF Kae1-like domain AI20_06865 PF00009 Elongation factor Tu GTP binding domain AI20_06865 PF03144 Elongation factor Tu domain 2 AI20_06865 PF09107 Elongation factor SelB, winged helix AI20_06865 PF09105 Elongation factor SelB, winged helix AI20_06865 PF09106 Elongation factor SelB, winged helix AI20_06870 PF12390 Selenocysteine synthase N terminal AI20_06870 PF03841 L-seryl-tRNA selenium transferase AI20_06875 PF01750 Hydrogenase maturation protease AI20_06880 PF07450 Formate hydrogenlyase maturation protein HycH AI20_06885 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AI20_06890 PF12838 4Fe-4S dicluster domain AI20_06895 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AI20_06895 PF00374 Nickel-dependent hydrogenase AI20_06895 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AI20_06900 PF00146 NADH dehydrogenase AI20_06905 PF00361 Proton-conducting membrane transporter AI20_06910 PF12798 4Fe-4S binding domain AI20_06910 PF00037 4Fe-4S binding domain AI20_06915 PF02705 K+ potassium transporter AI20_06925 PF12800 4Fe-4S binding domain AI20_06925 PF13247 4Fe-4S dicluster domain AI20_06930 PF00384 Molybdopterin oxidoreductase AI20_06930 PF01568 Molydopterin dinucleotide binding domain AI20_06930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AI20_06935 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AI20_06935 PF00384 Molybdopterin oxidoreductase AI20_06935 PF01568 Molydopterin dinucleotide binding domain AI20_06945 PF02954 Bacterial regulatory protein, Fis family AI20_06945 PF00158 Sigma-54 interaction domain AI20_06945 PF01590 GAF domain AI20_06950 PF02634 FdhD/NarQ family AI20_06955 PF13662 Toprim domain AI20_06955 PF02132 RecR protein AI20_06960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_06960 PF00183 Hsp90 protein AI20_06965 PF05191 Adenylate kinase, active site lid AI20_06970 PF00762 Ferrochelatase AI20_06975 PF01124 MAPEG family AI20_06980 PF00294 pfkB family carbohydrate kinase AI20_06995 PF00990 Diguanylate cyclase, GGDEF domain AI20_06995 PF03707 Bacterial signalling protein N terminal repeat AI20_06995 PF00563 EAL domain AI20_07000 PF00483 Nucleotidyl transferase AI20_07010 PF07273 Protein of unknown function (DUF1439) AI20_07015 PF00425 chorismate binding enzyme AI20_07020 PF13193 AMP-binding enzyme C-terminal domain AI20_07020 PF00501 AMP-binding enzyme AI20_07025 PF00857 Isochorismatase family AI20_07025 PF00550 Phosphopantetheine attachment site AI20_07030 PF00668 Condensation domain AI20_07030 PF00550 Phosphopantetheine attachment site AI20_07030 PF13193 AMP-binding enzyme C-terminal domain AI20_07030 PF00975 Thioesterase domain AI20_07030 PF00501 AMP-binding enzyme AI20_07040 PF13193 AMP-binding enzyme C-terminal domain AI20_07040 PF07993 Male sterility protein AI20_07040 PF00501 AMP-binding enzyme AI20_07040 PF00668 Condensation domain AI20_07040 PF00550 Phosphopantetheine attachment site AI20_07045 PF00975 Thioesterase domain AI20_07045 PF00668 Condensation domain AI20_07045 PF13193 AMP-binding enzyme C-terminal domain AI20_07045 PF00550 Phosphopantetheine attachment site AI20_07045 PF00501 AMP-binding enzyme AI20_07050 PF01497 Periplasmic binding protein AI20_07055 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AI20_07055 PF01648 4'-phosphopantetheinyl transferase superfamily AI20_07060 PF00005 ABC transporter AI20_07065 PF01032 FecCD transport family AI20_07070 PF01032 FecCD transport family AI20_07075 PF07715 TonB-dependent Receptor Plug Domain AI20_07075 PF00593 TonB dependent receptor AI20_07090 PF11143 Protein of unknown function (DUF2919) AI20_07095 PF01544 CorA-like Mg2+ transporter protein AI20_07105 PF01012 Electron transfer flavoprotein domain AI20_07115 PF01012 Electron transfer flavoprotein domain AI20_07115 PF00766 Electron transfer flavoprotein FAD-binding domain AI20_07120 PF00266 Aminotransferase class-V AI20_07125 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AI20_07130 PF00793 DAHP synthetase I family AI20_07135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_07135 PF00672 HAMP domain AI20_07140 PF04055 Radical SAM superfamily AI20_07145 PF13742 OB-fold nucleic acid binding domain AI20_07145 PF02601 Exonuclease VII, large subunit AI20_07150 PF00892 EamA-like transporter family AI20_07155 PF02472 Biopolymer transport protein ExbD/TolR AI20_07160 PF01618 MotA/TolQ/ExbB proton channel family AI20_07170 PF02705 K+ potassium transporter AI20_07175 PF00478 IMP dehydrogenase / GMP reductase domain AI20_07175 PF00571 CBS domain AI20_07180 PF02540 NAD synthase AI20_07180 PF00958 GMP synthase C terminal domain AI20_07180 PF00117 Glutamine amidotransferase class-I AI20_07195 PF02805 Metal binding domain of Ada AI20_07195 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AI20_07195 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AI20_07195 PF12833 Helix-turn-helix domain AI20_07210 PF05724 Thiopurine S-methyltransferase (TPMT) AI20_07215 PF00675 Insulinase (Peptidase family M16) AI20_07215 PF05193 Peptidase M16 inactive domain AI20_07220 PF00300 Histidine phosphatase superfamily (branch 1) AI20_07230 PF00892 EamA-like transporter family AI20_07235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AI20_07240 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AI20_07245 PF17757 UvrB interaction domain AI20_07245 PF03461 TRCF domain AI20_07245 PF02559 CarD-like/TRCF domain AI20_07245 PF00271 Helicase conserved C-terminal domain AI20_07245 PF00270 DEAD/DEAH box helicase AI20_07255 PF02687 FtsX-like permease family AI20_07255 PF12704 MacB-like periplasmic core domain AI20_07260 PF00005 ABC transporter AI20_07265 PF12704 MacB-like periplasmic core domain AI20_07265 PF02687 FtsX-like permease family AI20_07285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AI20_07285 PF05697 Bacterial trigger factor protein (TF) AI20_07285 PF05698 Bacterial trigger factor protein (TF) C-terminus AI20_07290 PF00574 Clp protease AI20_07295 PF06689 ClpX C4-type zinc finger AI20_07295 PF07724 AAA domain (Cdc48 subfamily) AI20_07295 PF10431 C-terminal, D2-small domain, of ClpB protein AI20_07300 PF02190 ATP-dependent protease La (LON) substrate-binding domain AI20_07300 PF00004 ATPase family associated with various cellular activities (AAA) AI20_07300 PF05362 Lon protease (S16) C-terminal proteolytic domain AI20_07305 PF00216 Bacterial DNA-binding protein AI20_07315 PF00005 ABC transporter AI20_07315 PF12848 ABC transporter AI20_07320 PF00474 Sodium:solute symporter family AI20_07325 PF04341 Protein of unknown function, DUF485 AI20_07340 PF00378 Enoyl-CoA hydratase/isomerase AI20_07345 PF01235 Sodium:alanine symporter family AI20_07355 PF06167 Glucose-regulated metallo-peptidase M90 AI20_07360 PF01184 GPR1/FUN34/yaaH family AI20_07375 PF00376 MerR family regulatory protein AI20_07375 PF09278 MerR, DNA binding AI20_07380 PF00682 HMGL-like AI20_07385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AI20_07385 PF02785 Biotin carboxylase C-terminal domain AI20_07385 PF00289 Biotin carboxylase, N-terminal domain AI20_07385 PF00364 Biotin-requiring enzyme AI20_07390 PF00378 Enoyl-CoA hydratase/isomerase AI20_07395 PF01039 Carboxyl transferase domain AI20_07400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AI20_07400 PF02770 Acyl-CoA dehydrogenase, middle domain AI20_07400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AI20_07405 PF00171 Aldehyde dehydrogenase family AI20_07410 PF02770 Acyl-CoA dehydrogenase, middle domain AI20_07410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AI20_07410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AI20_07415 PF00378 Enoyl-CoA hydratase/isomerase AI20_07420 PF00378 Enoyl-CoA hydratase/isomerase AI20_07425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AI20_07425 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AI20_07435 PF13520 Amino acid permease AI20_07440 PF01925 Sulfite exporter TauE/SafE AI20_07445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_07445 PF03466 LysR substrate binding domain AI20_07450 PF12146 Serine aminopeptidase, S33 AI20_07455 PF01738 Dienelactone hydrolase family AI20_07465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_07465 PF03466 LysR substrate binding domain AI20_07470 PF00248 Aldo/keto reductase family AI20_07475 PF12706 Beta-lactamase superfamily domain AI20_07480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_07480 PF00672 HAMP domain AI20_07480 PF00072 Response regulator receiver domain AI20_07480 PF17149 Periplasmic sensor domain found in signal transduction proteins AI20_07480 PF00512 His Kinase A (phospho-acceptor) domain AI20_07480 PF01627 Hpt domain AI20_07490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_07490 PF03466 LysR substrate binding domain AI20_07495 PF00232 Glycosyl hydrolase family 1 AI20_07500 PF01966 HD domain AI20_07510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_07510 PF03466 LysR substrate binding domain AI20_07515 PF01261 Xylose isomerase-like TIM barrel AI20_07520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AI20_07520 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AI20_07525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_07525 PF03466 LysR substrate binding domain AI20_07535 PF03279 Bacterial lipid A biosynthesis acyltransferase AI20_07540 PF03279 Bacterial lipid A biosynthesis acyltransferase AI20_07555 PF00990 Diguanylate cyclase, GGDEF domain AI20_07565 PF03104 DNA polymerase family B, exonuclease domain AI20_07565 PF00136 DNA polymerase family B AI20_07595 PF01554 MatE AI20_07600 PF06786 Uncharacterised protein family (UPF0253) AI20_07605 PF00677 Lumazine binding domain AI20_07620 PF13419 Haloacid dehalogenase-like hydrolase AI20_07625 PF01370 NAD dependent epimerase/dehydratase family AI20_07625 PF02222 ATP-grasp domain AI20_07630 PF00892 EamA-like transporter family AI20_07635 PF02525 Flavodoxin-like fold AI20_07665 PF17783 CvfB-like winged helix domain AI20_07665 PF13509 S1 domain AI20_07675 PF04269 Protein of unknown function, DUF440 AI20_07685 PF00912 Transglycosylase AI20_07690 PF04269 Protein of unknown function, DUF440 AI20_07695 PF03776 Septum formation topological specificity factor MinE AI20_07700 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AI20_07705 PF03775 Septum formation inhibitor MinC, C-terminal domain AI20_07705 PF05209 Septum formation inhibitor MinC, N-terminal domain AI20_07710 PF05166 YcgL domain AI20_07715 PF13406 Transglycosylase SLT domain AI20_07720 PF03313 Serine dehydratase alpha chain AI20_07720 PF03315 Serine dehydratase beta chain AI20_07725 PF03315 Serine dehydratase beta chain AI20_07725 PF03313 Serine dehydratase alpha chain AI20_07730 PF06865 Pyrimidine/purine nucleoside phosphorylase AI20_07735 PF00375 Sodium:dicarboxylate symporter family AI20_07740 PF00376 MerR family regulatory protein AI20_07740 PF09278 MerR, DNA binding AI20_07745 PF02803 Thiolase, C-terminal domain AI20_07745 PF00108 Thiolase, N-terminal domain AI20_07750 PF08668 HDOD domain AI20_07750 PF00563 EAL domain AI20_07755 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AI20_07760 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AI20_07770 PF08281 Sigma-70, region 4 AI20_07770 PF04542 Sigma-70 region 2 AI20_07795 PF01882 Protein of unknown function DUF58 AI20_07800 PF07726 ATPase family associated with various cellular activities (AAA) AI20_07800 PF17863 AAA lid domain AI20_07805 PF02803 Thiolase, C-terminal domain AI20_07805 PF00108 Thiolase, N-terminal domain AI20_07810 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AI20_07810 PF00378 Enoyl-CoA hydratase/isomerase AI20_07810 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AI20_07820 PF07152 YaeQ protein AI20_07840 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AI20_07840 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AI20_07845 PF00291 Pyridoxal-phosphate dependent enzyme AI20_07850 PF01546 Peptidase family M20/M25/M40 AI20_07850 PF07687 Peptidase dimerisation domain AI20_07855 PF01979 Amidohydrolase family AI20_07860 PF00696 Amino acid kinase family AI20_07865 PF00892 EamA-like transporter family AI20_07870 PF02625 XdhC and CoxI family AI20_07870 PF13478 XdhC Rossmann domain AI20_07880 PF12804 MobA-like NTP transferase domain AI20_07885 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AI20_07885 PF07992 Pyridine nucleotide-disulphide oxidoreductase AI20_07890 PF01979 Amidohydrolase family AI20_07895 PF00941 FAD binding domain in molybdopterin dehydrogenase AI20_07900 PF01799 [2Fe-2S] binding domain AI20_07900 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AI20_07900 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AI20_07905 PF00860 Permease family AI20_07910 PF01979 Amidohydrolase family AI20_07915 PF00860 Permease family AI20_07920 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AI20_07920 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AI20_07925 PF00941 FAD binding domain in molybdopterin dehydrogenase AI20_07925 PF03450 CO dehydrogenase flavoprotein C-terminal domain AI20_07930 PF00111 2Fe-2S iron-sulfur cluster binding domain AI20_07930 PF01799 [2Fe-2S] binding domain AI20_07940 PF05433 Glycine zipper 2TM domain AI20_07950 PF03606 C4-dicarboxylate anaerobic carrier AI20_07955 PF13193 AMP-binding enzyme C-terminal domain AI20_07955 PF00501 AMP-binding enzyme AI20_07960 PF08279 HTH domain AI20_07960 PF13280 WYL domain AI20_07970 PF01502 Phosphoribosyl-AMP cyclohydrolase AI20_07970 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AI20_07975 PF00977 Histidine biosynthesis protein AI20_07980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_07980 PF00072 Response regulator receiver domain AI20_07980 PF01627 Hpt domain AI20_07980 PF00512 His Kinase A (phospho-acceptor) domain AI20_07990 PF00072 Response regulator receiver domain AI20_07995 PF00977 Histidine biosynthesis protein AI20_08000 PF00117 Glutamine amidotransferase class-I AI20_08005 PF00475 Imidazoleglycerol-phosphate dehydratase AI20_08005 PF08645 Polynucleotide kinase 3 phosphatase AI20_08010 PF00155 Aminotransferase class I and II AI20_08015 PF00815 Histidinol dehydrogenase AI20_08020 PF08029 HisG, C-terminal domain AI20_08020 PF01634 ATP phosphoribosyltransferase AI20_08030 PF13307 Helicase C-terminal domain AI20_08030 PF04851 Type III restriction enzyme, res subunit AI20_08035 PF00814 Glycoprotease family AI20_08045 PF12697 Alpha/beta hydrolase family AI20_08045 PF08241 Methyltransferase domain AI20_08050 PF00501 AMP-binding enzyme AI20_08050 PF13193 AMP-binding enzyme C-terminal domain AI20_08055 PF01612 3'-5' exonuclease AI20_08055 PF00570 HRDC domain AI20_08060 PF00497 Bacterial extracellular solute-binding proteins, family 3 AI20_08070 PF01207 Dihydrouridine synthase (Dus) AI20_08075 PF04304 Protein of unknown function (DUF454) AI20_08080 PF00156 Phosphoribosyl transferase domain AI20_08085 PF12170 DNA polymerase III tau subunit V interacting with alpha AI20_08085 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AI20_08085 PF12169 DNA polymerase III subunits gamma and tau domain III AI20_08090 PF02575 YbaB/EbfC DNA-binding family AI20_08095 PF00141 Peroxidase AI20_08110 PF00072 Response regulator receiver domain AI20_08110 PF00196 Bacterial regulatory proteins, luxR family AI20_08120 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AI20_08120 PF04408 Helicase associated domain (HA2) AI20_08120 PF11898 Domain of unknown function (DUF3418) AI20_08120 PF00270 DEAD/DEAH box helicase AI20_08120 PF00271 Helicase conserved C-terminal domain AI20_08135 PF00512 His Kinase A (phospho-acceptor) domain AI20_08135 PF01627 Hpt domain AI20_08135 PF00672 HAMP domain AI20_08135 PF00072 Response regulator receiver domain AI20_08135 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AI20_08135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_08140 PF00072 Response regulator receiver domain AI20_08145 PF00753 Metallo-beta-lactamase superfamily AI20_08155 PF00586 AIR synthase related protein, N-terminal domain AI20_08155 PF02769 AIR synthase related protein, C-terminal domain AI20_08170 PF17785 PUA-like domain AI20_08170 PF10672 S-adenosylmethionine-dependent methyltransferase AI20_08175 PF00669 Bacterial flagellin N-terminal helical region AI20_08175 PF00700 Bacterial flagellin C-terminal helical region AI20_08175 PF07196 Flagellin hook IN motif AI20_08180 PF12729 Four helix bundle sensory module for signal transduction AI20_08180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_08180 PF00672 HAMP domain AI20_08185 PF00708 Acylphosphatase AI20_08190 PF02798 Glutathione S-transferase, N-terminal domain AI20_08190 PF00043 Glutathione S-transferase, C-terminal domain AI20_08195 PF09334 tRNA synthetases class I (M) AI20_08195 PF01588 Putative tRNA binding domain AI20_08195 PF08264 Anticodon-binding domain of tRNA AI20_08200 PF10609 NUBPL iron-transfer P-loop NTPase AI20_08205 PF00485 Phosphoribulokinase / Uridine kinase family AI20_08210 PF00692 dUTPase AI20_08215 PF01384 Phosphate transporter family AI20_08220 PF12111 Polyribonucleotide phosphorylase C terminal AI20_08220 PF10150 Ribonuclease E/G family AI20_08220 PF00575 S1 RNA binding domain AI20_08225 PF01479 S4 domain AI20_08225 PF00849 RNA pseudouridylate synthase AI20_08230 PF13419 Haloacid dehalogenase-like hydrolase AI20_08235 PF02545 Maf-like protein AI20_08245 PF02620 Large ribosomal RNA subunit accumulation protein YceD AI20_08255 PF02504 Fatty acid synthesis protein AI20_08260 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AI20_08260 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AI20_08265 PF00698 Acyl transferase domain AI20_08275 PF00550 Phosphopantetheine attachment site AI20_08280 PF02801 Beta-ketoacyl synthase, C-terminal domain AI20_08280 PF00109 Beta-ketoacyl synthase, N-terminal domain AI20_08285 PF01063 Amino-transferase class IV AI20_08290 PF02618 YceG-like family AI20_08295 PF02223 Thymidylate kinase AI20_08300 PF09115 DNA polymerase III, delta subunit, C terminal AI20_08305 PF01026 TatD related DNase AI20_08310 PF00589 Phage integrase family AI20_08320 PF01189 16S rRNA methyltransferase RsmB/F AI20_08320 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AI20_08320 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AI20_08325 PF02470 MlaD protein AI20_08330 PF04403 Paraquat-inducible protein A AI20_08345 PF00285 Citrate synthase, C-terminal domain AI20_08350 PF03972 MmgE/PrpD family AI20_08365 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AI20_08365 PF06974 Protein of unknown function (DUF1298) AI20_08390 PF00106 short chain dehydrogenase AI20_08400 PF07130 YebG protein AI20_08410 PF05362 Lon protease (S16) C-terminal proteolytic domain AI20_08410 PF13654 AAA domain AI20_08415 PF07977 FabA-like domain AI20_08430 PF16326 ABC transporter C-terminal domain AI20_08430 PF12848 ABC transporter AI20_08430 PF00005 ABC transporter AI20_08440 PF01170 Putative RNA methylase family UPF0020 AI20_08440 PF10672 S-adenosylmethionine-dependent methyltransferase AI20_08440 PF02926 THUMP domain AI20_08450 PF07126 Cell-division protein ZapC AI20_08455 PF01180 Dihydroorotate dehydrogenase AI20_08460 PF05088 Bacterial NAD-glutamate dehydrogenase AI20_08470 PF11940 Domain of unknown function (DUF3458) Ig-like fold AI20_08470 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AI20_08470 PF01433 Peptidase family M1 domain AI20_08475 PF11818 C-terminal domain of tail specific protease (DUF3340) AI20_08475 PF00595 PDZ domain AI20_08475 PF03572 Peptidase family S41 AI20_08475 PF17804 Tail specific protease N-terminal domain AI20_08480 PF17516 ProQ C-terminal domain AI20_08480 PF04352 ProQ/FINO family AI20_08485 PF13185 GAF domain AI20_08495 PF00115 Cytochrome C and Quinol oxidase polypeptide I AI20_08510 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AI20_08510 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AI20_08520 PF00403 Heavy-metal-associated domain AI20_08535 PF13545 Crp-like helix-turn-helix domain AI20_08535 PF00027 Cyclic nucleotide-binding domain AI20_08540 PF00582 Universal stress protein family AI20_08545 PF01171 PP-loop family AI20_08560 PF13417 Glutathione S-transferase, N-terminal domain AI20_08565 PF05025 RbsD / FucU transport protein family AI20_08570 PF00005 ABC transporter AI20_08575 PF02653 Branched-chain amino acid transport system / permease component AI20_08580 PF13407 Periplasmic binding protein domain AI20_08585 PF00294 pfkB family carbohydrate kinase AI20_08590 PF00356 Bacterial regulatory proteins, lacI family AI20_08595 PF03707 Bacterial signalling protein N terminal repeat AI20_08595 PF00563 EAL domain AI20_08595 PF00990 Diguanylate cyclase, GGDEF domain AI20_08605 PF02146 Sir2 family AI20_08620 PF00512 His Kinase A (phospho-acceptor) domain AI20_08620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_08620 PF00072 Response regulator receiver domain AI20_08620 PF09456 RcsC Alpha-Beta-Loop (ABL) AI20_08625 PF00216 Bacterial DNA-binding protein AI20_08630 PF01588 Putative tRNA binding domain AI20_08630 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AI20_08630 PF03147 Ferredoxin-fold anticodon binding domain AI20_08630 PF03483 B3/4 domain AI20_08630 PF03484 tRNA synthetase B5 domain AI20_08635 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AI20_08635 PF01409 tRNA synthetases class II core domain (F) AI20_08640 PF00453 Ribosomal protein L20 AI20_08645 PF01632 Ribosomal protein L35 AI20_08650 PF05198 Translation initiation factor IF-3, N-terminal domain AI20_08650 PF00707 Translation initiation factor IF-3, C-terminal domain AI20_08655 PF02824 TGS domain AI20_08655 PF03129 Anticodon binding domain AI20_08655 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AI20_08655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AI20_08665 PF04055 Radical SAM superfamily AI20_08675 PF03989 DNA gyrase C-terminal domain, beta-propeller AI20_08675 PF00521 DNA gyrase/topoisomerase IV, subunit A AI20_08685 PF13419 Haloacid dehalogenase-like hydrolase AI20_08690 PF02867 Ribonucleotide reductase, barrel domain AI20_08690 PF00317 Ribonucleotide reductase, all-alpha domain AI20_08690 PF03477 ATP cone domain AI20_08695 PF00268 Ribonucleotide reductase, small chain AI20_08700 PF00111 2Fe-2S iron-sulfur cluster binding domain AI20_08705 PF03562 MltA specific insert domain AI20_08705 PF06725 3D domain AI20_08710 PF06945 Protein of unknown function (DUF1289) AI20_08715 PF02378 Phosphotransferase system, EIIC AI20_08715 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AI20_08720 PF00294 pfkB family carbohydrate kinase AI20_08725 PF00381 PTS HPr component phosphorylation site AI20_08725 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AI20_08730 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AI20_08730 PF00356 Bacterial regulatory proteins, lacI family AI20_08735 PF03222 Tryptophan/tyrosine permease family AI20_08745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_08745 PF03466 LysR substrate binding domain AI20_08750 PF00270 DEAD/DEAH box helicase AI20_08750 PF00271 Helicase conserved C-terminal domain AI20_08760 PF01264 Chorismate synthase AI20_08765 PF05175 Methyltransferase small domain AI20_08770 PF01713 Smr domain AI20_08780 PF08448 PAS fold AI20_08780 PF00990 Diguanylate cyclase, GGDEF domain AI20_08810 PF03831 PhnA domain AI20_08810 PF08274 PhnA Zinc-Ribbon AI20_08830 PF02567 Phenazine biosynthesis-like protein AI20_08855 PF01327 Polypeptide deformylase AI20_08870 PF03330 Lytic transglycolase AI20_08875 PF16330 MukB hinge domain AI20_08875 PF04310 MukB N-terminal AI20_08880 PF04288 MukE-like family AI20_08885 PF03882 MukF winged-helix domain AI20_08885 PF17192 MukF middle domain AI20_08885 PF17193 MukF C-terminal domain AI20_08895 PF02698 DUF218 domain AI20_08900 PF00121 Triosephosphate isomerase AI20_08905 PF00365 Phosphofructokinase AI20_08910 PF01546 Peptidase family M20/M25/M40 AI20_08910 PF07687 Peptidase dimerisation domain AI20_08915 PF13419 Haloacid dehalogenase-like hydrolase AI20_08920 PF02789 Cytosol aminopeptidase family, N-terminal domain AI20_08920 PF00883 Cytosol aminopeptidase family, catalytic domain AI20_08965 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AI20_08965 PF00128 Alpha amylase, catalytic domain AI20_08975 PF11398 Protein of unknown function (DUF2813) AI20_08980 PF14525 AraC-binding-like domain AI20_08980 PF12833 Helix-turn-helix domain AI20_08990 PF03466 LysR substrate binding domain AI20_08990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_08995 PF01925 Sulfite exporter TauE/SafE AI20_09005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AI20_09005 PF18029 Glyoxalase-like domain AI20_09010 PF07478 D-ala D-ala ligase C-terminus AI20_09010 PF01820 D-ala D-ala ligase N-terminus AI20_09025 PF00255 Glutathione peroxidase AI20_09030 PF00271 Helicase conserved C-terminal domain AI20_09030 PF00270 DEAD/DEAH box helicase AI20_09035 PF13673 Acetyltransferase (GNAT) domain AI20_09050 PF01928 CYTH domain AI20_09060 PF00583 Acetyltransferase (GNAT) family AI20_09065 PF00465 Iron-containing alcohol dehydrogenase AI20_09070 PF03992 Antibiotic biosynthesis monooxygenase AI20_09075 PF08543 Phosphomethylpyrimidine kinase AI20_09100 PF00561 alpha/beta hydrolase fold AI20_09100 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AI20_09105 PF01575 MaoC like domain AI20_09120 PF00664 ABC transporter transmembrane region AI20_09120 PF00005 ABC transporter AI20_09125 PF00005 ABC transporter AI20_09125 PF00664 ABC transporter transmembrane region AI20_09130 PF01627 Hpt domain AI20_09130 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AI20_09130 PF00072 Response regulator receiver domain AI20_09130 PF00512 His Kinase A (phospho-acceptor) domain AI20_09130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_09130 PF00672 HAMP domain AI20_09135 PF00085 Thioredoxin AI20_09140 PF00939 Sodium:sulfate symporter transmembrane region AI20_09145 PF00343 Carbohydrate phosphorylase AI20_09165 PF00425 chorismate binding enzyme AI20_09165 PF04715 Anthranilate synthase component I, N terminal region AI20_09170 PF00293 NUDIX domain AI20_09175 PF03222 Tryptophan/tyrosine permease family AI20_09180 PF00375 Sodium:dicarboxylate symporter family AI20_09185 PF00570 HRDC domain AI20_09185 PF16124 RecQ zinc-binding AI20_09185 PF09382 RQC domain AI20_09185 PF00270 DEAD/DEAH box helicase AI20_09185 PF00271 Helicase conserved C-terminal domain AI20_09190 PF08298 PrkA AAA domain AI20_09190 PF06798 PrkA serine protein kinase C-terminal domain AI20_09195 PF04285 Protein of unknown function (DUF444) AI20_09200 PF04293 SpoVR like protein AI20_09205 PF07840 FadR C-terminal domain AI20_09205 PF00392 Bacterial regulatory proteins, gntR family AI20_09210 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AI20_09215 PF02600 Disulfide bond formation protein DsbB AI20_09220 PF09335 SNARE associated Golgi protein AI20_09230 PF02151 UvrB/uvrC motif AI20_09230 PF17757 UvrB interaction domain AI20_09230 PF12344 Ultra-violet resistance protein B AI20_09230 PF00271 Helicase conserved C-terminal domain AI20_09230 PF04851 Type III restriction enzyme, res subunit AI20_09240 PF06826 Predicted Permease Membrane Region AI20_09240 PF02080 TrkA-C domain AI20_09245 PF01464 Transglycosylase SLT domain AI20_09245 PF01551 Peptidase family M23 AI20_09245 PF10145 Phage-related minor tail protein AI20_09260 PF01970 Tripartite tricarboxylate transporter TctA family AI20_09265 PF12431 Transcriptional regulator AI20_09265 PF00072 Response regulator receiver domain AI20_09265 PF08279 HTH domain AI20_09270 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AI20_09270 PF17203 Single cache domain 3 AI20_09270 PF00989 PAS fold AI20_09270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_09275 PF01047 MarR family AI20_09275 PF00480 ROK family AI20_09280 PF17200 Single Cache domain 2 AI20_09280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_09280 PF00672 HAMP domain AI20_09285 PF02810 SEC-C motif AI20_09290 PF04324 BFD-like [2Fe-2S] binding domain AI20_09290 PF01266 FAD dependent oxidoreductase AI20_09295 PF00890 FAD binding domain AI20_09300 PF13183 4Fe-4S dicluster domain AI20_09300 PF02754 Cysteine-rich domain AI20_09310 PF02335 Cytochrome c552 AI20_09315 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) AI20_09315 PF13435 Cytochrome c554 and c-prime AI20_09320 PF00037 4Fe-4S binding domain AI20_09320 PF13247 4Fe-4S dicluster domain AI20_09325 PF03916 Polysulphide reductase, NrfD AI20_09330 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AI20_09330 PF01578 Cytochrome C assembly protein AI20_09335 PF08534 Redoxin AI20_09350 PF00768 D-alanyl-D-alanine carboxypeptidase AI20_09355 PF01212 Beta-eliminating lyase AI20_09360 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AI20_09365 PF01266 FAD dependent oxidoreductase AI20_09370 PF00571 CBS domain AI20_09370 PF00478 IMP dehydrogenase / GMP reductase domain AI20_09385 PF08267 Cobalamin-independent synthase, N-terminal domain AI20_09385 PF01717 Cobalamin-independent synthase, Catalytic domain AI20_09390 PF03466 LysR substrate binding domain AI20_09390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_09400 PF07715 TonB-dependent Receptor Plug Domain AI20_09400 PF00593 TonB dependent receptor AI20_09405 PF12833 Helix-turn-helix domain AI20_09410 PF00106 short chain dehydrogenase AI20_09415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_09415 PF03466 LysR substrate binding domain AI20_09420 PF13460 NAD(P)H-binding AI20_09430 PF01053 Cys/Met metabolism PLP-dependent enzyme AI20_09435 PF00675 Insulinase (Peptidase family M16) AI20_09435 PF05193 Peptidase M16 inactive domain AI20_09440 PF01118 Semialdehyde dehydrogenase, NAD binding domain AI20_09440 PF02774 Semialdehyde dehydrogenase, dimerisation domain AI20_09445 PF00893 Small Multidrug Resistance protein AI20_09450 PF18381 YcaO cyclodehydratase C-terminal domain AI20_09450 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AI20_09455 PF01226 Formate/nitrite transporter AI20_09460 PF01228 Glycine radical AI20_09460 PF02901 Pyruvate formate lyase-like AI20_09470 PF00202 Aminotransferase class-III AI20_09475 PF00266 Aminotransferase class-V AI20_09480 PF00392 Bacterial regulatory proteins, gntR family AI20_09480 PF07702 UTRA domain AI20_09490 PF00005 ABC transporter AI20_09495 PF00528 Binding-protein-dependent transport system inner membrane component AI20_09500 PF01266 FAD dependent oxidoreductase AI20_09505 PF03692 Putative zinc- or iron-chelating domain AI20_09520 PF00549 CoA-ligase AI20_09520 PF02629 CoA binding domain AI20_09525 PF08442 ATP-grasp domain AI20_09525 PF00549 CoA-ligase AI20_09530 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AI20_09530 PF00364 Biotin-requiring enzyme AI20_09530 PF02817 e3 binding domain AI20_09535 PF00676 Dehydrogenase E1 component AI20_09535 PF16078 2-oxoglutarate dehydrogenase N-terminus AI20_09535 PF02779 Transketolase, pyrimidine binding domain AI20_09535 PF16870 2-oxoglutarate dehydrogenase C-terminal AI20_09540 PF13085 2Fe-2S iron-sulfur cluster binding domain AI20_09545 PF00890 FAD binding domain AI20_09545 PF02910 Fumarate reductase flavoprotein C-term AI20_09550 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AI20_09555 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AI20_09560 PF00285 Citrate synthase, C-terminal domain AI20_09575 PF02801 Beta-ketoacyl synthase, C-terminal domain AI20_09575 PF00109 Beta-ketoacyl synthase, N-terminal domain AI20_09580 PF01266 FAD dependent oxidoreductase AI20_09580 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AI20_09590 PF03606 C4-dicarboxylate anaerobic carrier AI20_09605 PF01863 Protein of unknown function DUF45 AI20_09620 PF01197 Ribosomal protein L31 AI20_09625 PF00444 Ribosomal protein L36 AI20_09630 PF02678 Pirin AI20_09630 PF05726 Pirin C-terminal cupin domain AI20_09635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_09635 PF03466 LysR substrate binding domain AI20_09640 PF00929 Exonuclease AI20_09640 PF08411 Exonuclease C-terminal AI20_09655 PF03788 LrgA family AI20_09660 PF04172 LrgB-like family AI20_09665 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AI20_09665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AI20_09670 PF00501 AMP-binding enzyme AI20_09675 PF08891 YfcL protein AI20_09685 PF03741 Integral membrane protein TerC family AI20_09690 PF00691 OmpA family AI20_09695 PF00990 Diguanylate cyclase, GGDEF domain AI20_09695 PF00563 EAL domain AI20_09695 PF03707 Bacterial signalling protein N terminal repeat AI20_09700 PF13689 YfiR/HmsC-like AI20_09705 PF00158 Sigma-54 interaction domain AI20_09705 PF18024 Helix-turn-helix domain AI20_09710 PF01329 Pterin 4 alpha carbinolamine dehydratase AI20_09715 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AI20_09720 PF05128 Domain of unknown function (DUF697) AI20_09725 PF04317 YcjX-like family, DUF463 AI20_09735 PF06667 Phage shock protein B AI20_09740 PF04012 PspA/IM30 family AI20_09745 PF02954 Bacterial regulatory protein, Fis family AI20_09745 PF00158 Sigma-54 interaction domain AI20_09750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AI20_09755 PF00528 Binding-protein-dependent transport system inner membrane component AI20_09760 PF00528 Binding-protein-dependent transport system inner membrane component AI20_09760 PF12911 N-terminal TM domain of oligopeptide transport permease C AI20_09765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AI20_09765 PF00005 ABC transporter AI20_09770 PF00005 ABC transporter AI20_09775 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AI20_09780 PF00156 Phosphoribosyl transferase domain AI20_09785 PF02674 Colicin V production protein AI20_09790 PF02403 Seryl-tRNA synthetase N-terminal domain AI20_09790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AI20_09795 PF00004 ATPase family associated with various cellular activities (AAA) AI20_09795 PF16193 AAA C-terminal domain AI20_09795 PF12002 MgsA AAA+ ATPase C terminal AI20_09800 PF03548 Outer membrane lipoprotein carrier protein LolA AI20_09805 PF01580 FtsK/SpoIIIE family AI20_09805 PF09397 Ftsk gamma domain AI20_09805 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AI20_09805 PF17854 FtsK alpha domain AI20_09810 PF01037 Lrp/AsnC ligand binding domain AI20_09815 PF07992 Pyridine nucleotide-disulphide oxidoreductase AI20_09820 PF17158 Membrane-associated sensor, integral membrane domain AI20_09820 PF00990 Diguanylate cyclase, GGDEF domain AI20_09825 PF05433 Glycine zipper 2TM domain AI20_09830 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AI20_09835 PF04377 Arginine-tRNA-protein transferase, C terminus AI20_09835 PF04376 Arginine-tRNA-protein transferase, N terminus AI20_09840 PF01176 Translation initiation factor 1A / IF-1 AI20_09845 PF17871 AAA lid domain AI20_09845 PF00004 ATPase family associated with various cellular activities (AAA) AI20_09845 PF07724 AAA domain (Cdc48 subfamily) AI20_09845 PF02861 Clp amino terminal domain, pathogenicity island component AI20_09845 PF10431 C-terminal, D2-small domain, of ClpB protein AI20_09850 PF02617 ATP-dependent Clp protease adaptor protein ClpS AI20_09855 PF00313 'Cold-shock' DNA-binding domain AI20_09860 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AI20_09860 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AI20_09890 PF04717 Type VI secretion system, phage-baseplate injector AI20_09895 PF05638 Type VI secretion system effector, Hcp AI20_09900 PF00239 Resolvase, N terminal domain AI20_09900 PF02796 Helix-turn-helix domain of resolvase AI20_09925 PF10722 Putative bacterial sensory transduction regulator AI20_09935 PF00265 Thymidine kinase AI20_09940 PF03553 Na+/H+ antiporter family AI20_09945 PF00816 H-NS histone family AI20_09950 PF01923 Cobalamin adenosyltransferase AI20_09955 PF12843 Putative quorum-sensing-regulated virulence factor AI20_09960 PF04055 Radical SAM superfamily AI20_09965 PF06508 Queuosine biosynthesis protein QueC AI20_09980 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AI20_09985 PF18073 Rubredoxin metal binding domain AI20_09995 PF00216 Bacterial DNA-binding protein AI20_10000 PF00575 S1 RNA binding domain AI20_10005 PF02224 Cytidylate kinase AI20_10010 PF00925 GTP cyclohydrolase II AI20_10015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_10015 PF03466 LysR substrate binding domain AI20_10020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_10020 PF03466 LysR substrate binding domain AI20_10025 PF07690 Major Facilitator Superfamily AI20_10040 PF00881 Nitroreductase family AI20_10045 PF00563 EAL domain AI20_10045 PF13188 PAS domain AI20_10045 PF03707 Bacterial signalling protein N terminal repeat AI20_10045 PF00990 Diguanylate cyclase, GGDEF domain AI20_10055 PF03466 LysR substrate binding domain AI20_10055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_10060 PF00072 Response regulator receiver domain AI20_10070 PF01212 Beta-eliminating lyase AI20_10085 PF00248 Aldo/keto reductase family AI20_10090 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AI20_10100 PF03411 Penicillin-insensitive murein endopeptidase AI20_10110 PF04536 TPM domain AI20_10125 PF01618 MotA/TolQ/ExbB proton channel family AI20_10130 PF13677 Membrane MotB of proton-channel complex MotA/MotB AI20_10130 PF00691 OmpA family AI20_10135 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AI20_10140 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AI20_10145 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AI20_10145 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AI20_10155 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AI20_10155 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AI20_10160 PF00384 Molybdopterin oxidoreductase AI20_10160 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AI20_10160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AI20_10165 PF00146 NADH dehydrogenase AI20_10170 PF12838 4Fe-4S dicluster domain AI20_10175 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AI20_10180 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AI20_10185 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AI20_10185 PF00361 Proton-conducting membrane transporter AI20_10190 PF00361 Proton-conducting membrane transporter AI20_10195 PF00361 Proton-conducting membrane transporter AI20_10205 PF00072 Response regulator receiver domain AI20_10210 PF01966 HD domain AI20_10215 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AI20_10215 PF02769 AIR synthase related protein, C-terminal domain AI20_10215 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AI20_10220 PF00497 Bacterial extracellular solute-binding proteins, family 3 AI20_10220 PF01464 Transglycosylase SLT domain AI20_10230 PF07191 zinc-ribbons AI20_10235 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AI20_10235 PF01926 50S ribosome-binding GTPase AI20_10240 PF13360 PQQ-like domain AI20_10245 PF09976 Tetratricopeptide repeat-like domain AI20_10250 PF03129 Anticodon binding domain AI20_10250 PF13393 Histidyl-tRNA synthetase AI20_10255 PF04551 GcpE protein AI20_10260 PF13464 Domain of unknown function (DUF4115) AI20_10270 PF04055 Radical SAM superfamily AI20_10275 PF00334 Nucleoside diphosphate kinase AI20_10280 PF00883 Cytosol aminopeptidase family, catalytic domain AI20_10280 PF12404 Peptidase AI20_10285 PF12404 Peptidase AI20_10285 PF00883 Cytosol aminopeptidase family, catalytic domain AI20_10290 PF00111 2Fe-2S iron-sulfur cluster binding domain AI20_10295 PF00012 Hsp70 protein AI20_10300 PF07743 HSCB C-terminal oligomerisation domain AI20_10305 PF01521 Iron-sulphur cluster biosynthesis AI20_10310 PF01592 NifU-like N terminal domain AI20_10315 PF00266 Aminotransferase class-V AI20_10320 PF02082 Transcriptional regulator AI20_10325 PF00588 SpoU rRNA Methylase family AI20_10350 PF07719 Tetratricopeptide repeat AI20_10350 PF13181 Tetratricopeptide repeat AI20_10360 PF02355 Protein export membrane protein AI20_10360 PF07549 SecD/SecF GG Motif AI20_10365 PF13721 SecD export protein N-terminal TM region AI20_10365 PF02355 Protein export membrane protein AI20_10365 PF07549 SecD/SecF GG Motif AI20_10370 PF02699 Preprotein translocase subunit AI20_10375 PF01702 Queuine tRNA-ribosyltransferase AI20_10380 PF02547 Queuosine biosynthesis protein AI20_10385 PF00571 CBS domain AI20_10390 PF10417 C-terminal domain of 1-Cys peroxiredoxin AI20_10390 PF00578 AhpC/TSA family AI20_10395 PF13192 Thioredoxin domain AI20_10395 PF07992 Pyridine nucleotide-disulphide oxidoreductase AI20_10400 PF07690 Major Facilitator Superfamily AI20_10405 PF00989 PAS fold AI20_10405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_10405 PF00512 His Kinase A (phospho-acceptor) domain AI20_10415 PF08241 Methyltransferase domain AI20_10420 PF00884 Sulfatase AI20_10425 PF04055 Radical SAM superfamily AI20_10425 PF13186 Iron-sulfur cluster-binding domain AI20_10430 PF02347 Glycine cleavage system P-protein AI20_10435 PF01597 Glycine cleavage H-protein AI20_10440 PF08669 Glycine cleavage T-protein C-terminal barrel domain AI20_10440 PF01571 Aminomethyltransferase folate-binding domain AI20_10445 PF01494 FAD binding domain AI20_10450 PF01494 FAD binding domain AI20_10455 PF03695 Uncharacterised protein family (UPF0149) AI20_10460 PF05164 Cell division protein ZapA AI20_10470 PF07690 Major Facilitator Superfamily AI20_10475 PF00043 Glutathione S-transferase, C-terminal domain AI20_10475 PF02798 Glutathione S-transferase, N-terminal domain AI20_10485 PF00459 Inositol monophosphatase family AI20_10490 PF12729 Four helix bundle sensory module for signal transduction AI20_10490 PF00672 HAMP domain AI20_10490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_10495 PF02535 ZIP Zinc transporter AI20_10505 PF01048 Phosphorylase superfamily AI20_10515 PF01497 Periplasmic binding protein AI20_10530 PF02561 Flagellar protein FliS AI20_10535 PF02465 Flagellar hook-associated protein 2 N-terminus AI20_10535 PF07196 Flagellin hook IN motif AI20_10535 PF07195 Flagellar hook-associated protein 2 C-terminus AI20_10545 PF00700 Bacterial flagellin C-terminal helical region AI20_10545 PF07196 Flagellin hook IN motif AI20_10545 PF00669 Bacterial flagellin N-terminal helical region AI20_10550 PF00700 Bacterial flagellin C-terminal helical region AI20_10550 PF07196 Flagellin hook IN motif AI20_10550 PF00669 Bacterial flagellin N-terminal helical region AI20_10555 PF03458 UPF0126 domain AI20_10565 PF02568 Thiamine biosynthesis protein (ThiI) AI20_10565 PF02926 THUMP domain AI20_10575 PF00905 Penicillin binding protein transpeptidase domain AI20_10575 PF06832 Penicillin-Binding Protein C-terminus Family AI20_10575 PF00912 Transglycosylase AI20_10580 PF07678 A-macroglobulin TED domain AI20_10580 PF01835 MG2 domain AI20_10580 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AI20_10580 PF07703 Alpha-2-macroglobulin bait region domain AI20_10580 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AI20_10580 PF00207 Alpha-2-macroglobulin family AI20_10580 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AI20_10580 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AI20_10580 PF17962 Bacterial macroglobulin domain 6 AI20_10585 PF07992 Pyridine nucleotide-disulphide oxidoreductase AI20_10585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AI20_10590 PF03707 Bacterial signalling protein N terminal repeat AI20_10590 PF00563 EAL domain AI20_10590 PF00990 Diguanylate cyclase, GGDEF domain AI20_10595 PF04055 Radical SAM superfamily AI20_10615 PF02563 Polysaccharide biosynthesis/export protein AI20_10615 PF10531 SLBB domain AI20_10625 PF02350 UDP-N-acetylglucosamine 2-epimerase AI20_10630 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AI20_10630 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AI20_10630 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AI20_10640 PF00535 Glycosyl transferase family 2 AI20_10640 PF02709 N-terminal domain of galactosyltransferase AI20_10645 PF05159 Capsule polysaccharide biosynthesis protein AI20_10650 PF05159 Capsule polysaccharide biosynthesis protein AI20_10655 PF00528 Binding-protein-dependent transport system inner membrane component AI20_10660 PF00528 Binding-protein-dependent transport system inner membrane component AI20_10665 PF00497 Bacterial extracellular solute-binding proteins, family 3 AI20_10670 PF00005 ABC transporter AI20_10675 PF03956 Lysine exporter LysO AI20_10680 PF01979 Amidohydrolase family AI20_10685 PF04336 Acyl carrier protein phosphodiesterase AI20_10700 PF03960 ArsC family AI20_10705 PF00578 AhpC/TSA family AI20_10710 PF01435 Peptidase family M48 AI20_10710 PF13181 Tetratricopeptide repeat AI20_10715 PF01206 Sulfurtransferase TusA AI20_10720 PF01594 AI-2E family transporter AI20_10730 PF00561 alpha/beta hydrolase fold AI20_10735 PF03976 Polyphosphate kinase 2 (PPK2) AI20_10740 PF08402 TOBE domain AI20_10740 PF00005 ABC transporter AI20_10745 PF00528 Binding-protein-dependent transport system inner membrane component AI20_10750 PF14785 Maltose transport system permease protein MalF P2 domain AI20_10750 PF00528 Binding-protein-dependent transport system inner membrane component AI20_10755 PF01547 Bacterial extracellular solute-binding protein AI20_10760 PF04245 37-kD nucleoid-associated bacterial protein AI20_10765 PF07208 Protein of unknown function (DUF1414) AI20_10770 PF11893 Domain of unknown function (DUF3413) AI20_10770 PF00884 Sulfatase AI20_10775 PF00593 TonB dependent receptor AI20_10775 PF07715 TonB-dependent Receptor Plug Domain AI20_10780 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AI20_10780 PF00326 Prolyl oligopeptidase family AI20_10800 PF03974 Ecotin AI20_10805 PF04219 Protein of unknown function, DUF AI20_10810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_10810 PF03466 LysR substrate binding domain AI20_10815 PF01817 Chorismate mutase type II AI20_10815 PF02153 Prephenate dehydrogenase AI20_10820 PF00793 DAHP synthetase I family AI20_10825 PF03009 Glycerophosphoryl diester phosphodiesterase family AI20_10830 PF01266 FAD dependent oxidoreductase AI20_10830 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AI20_10840 PF08220 DeoR-like helix-turn-helix domain AI20_10840 PF00455 DeoR C terminal sensor domain AI20_10845 PF07690 Major Facilitator Superfamily AI20_10850 PF00230 Major intrinsic protein AI20_10855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AI20_10855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AI20_10860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_10860 PF00672 HAMP domain AI20_10860 PF02743 Cache domain AI20_10870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_10870 PF03466 LysR substrate binding domain AI20_10895 PF00248 Aldo/keto reductase family AI20_10900 PF07690 Major Facilitator Superfamily AI20_10915 PF05114 Protein of unknown function (DUF692) AI20_10935 PF02322 Cytochrome bd terminal oxidase subunit II AI20_10940 PF01654 Cytochrome bd terminal oxidase subunit I AI20_10945 PF00392 Bacterial regulatory proteins, gntR family AI20_10945 PF00155 Aminotransferase class I and II AI20_10955 PF04391 Protein of unknown function (DUF533) AI20_10960 PF00892 EamA-like transporter family AI20_10985 PF07690 Major Facilitator Superfamily AI20_10990 PF03466 LysR substrate binding domain AI20_10990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_11000 PF07690 Major Facilitator Superfamily AI20_11005 PF09009 Exotoxin A catalytic AI20_11005 PF09102 Exotoxin A, targeting AI20_11005 PF09101 Exotoxin A binding AI20_11010 PF00849 RNA pseudouridylate synthase AI20_11010 PF01479 S4 domain AI20_11035 PF01844 HNH endonuclease AI20_11040 PF00300 Histidine phosphatase superfamily (branch 1) AI20_11045 PF13309 HTH domain AI20_11045 PF08348 YheO-like PAS domain AI20_11050 PF03313 Serine dehydratase alpha chain AI20_11055 PF01042 Endoribonuclease L-PSP AI20_11065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_11065 PF12729 Four helix bundle sensory module for signal transduction AI20_11065 PF00672 HAMP domain AI20_11080 PF03466 LysR substrate binding domain AI20_11080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_11085 PF00753 Metallo-beta-lactamase superfamily AI20_11085 PF14863 Alkyl sulfatase dimerisation AI20_11085 PF14864 Alkyl sulfatase C-terminal AI20_11095 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AI20_11095 PF17944 Arginine decarboxylase C-terminal helical extension AI20_11095 PF17810 Arginine decarboxylase helical bundle domain AI20_11105 PF07687 Peptidase dimerisation domain AI20_11105 PF01546 Peptidase family M20/M25/M40 AI20_11130 PF04264 YceI-like domain AI20_11135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_11135 PF03466 LysR substrate binding domain AI20_11145 PF01268 Formate--tetrahydrofolate ligase AI20_11155 PF00672 HAMP domain AI20_11155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_11155 PF17200 Single Cache domain 2 AI20_11160 PF01227 GTP cyclohydrolase I AI20_11165 PF00994 Probable molybdopterin binding domain AI20_11165 PF03454 MoeA C-terminal region (domain IV) AI20_11165 PF03453 MoeA N-terminal region (domain I and II) AI20_11170 PF00899 ThiF family AI20_11175 PF12697 Alpha/beta hydrolase family AI20_11180 PF03459 TOBE domain AI20_11180 PF00005 ABC transporter AI20_11185 PF00528 Binding-protein-dependent transport system inner membrane component AI20_11195 PF02391 MoaE protein AI20_11200 PF02597 ThiS family AI20_11205 PF01967 MoaC family AI20_11210 PF00994 Probable molybdopterin binding domain AI20_11215 PF03264 NapC/NirT cytochrome c family, N-terminal region AI20_11220 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AI20_11225 PF13237 4Fe-4S dicluster domain AI20_11225 PF12801 4Fe-4S binding domain AI20_11230 PF12838 4Fe-4S dicluster domain AI20_11230 PF12800 4Fe-4S binding domain AI20_11235 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AI20_11235 PF10518 TAT (twin-arginine translocation) pathway signal sequence AI20_11235 PF01568 Molydopterin dinucleotide binding domain AI20_11235 PF00384 Molybdopterin oxidoreductase AI20_11245 PF00037 4Fe-4S binding domain AI20_11245 PF12800 4Fe-4S binding domain AI20_11245 PF13187 4Fe-4S dicluster domain AI20_11250 PF06463 Molybdenum Cofactor Synthesis C AI20_11250 PF04055 Radical SAM superfamily AI20_11255 PF07730 Histidine kinase AI20_11255 PF00672 HAMP domain AI20_11255 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AI20_11255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_11260 PF00072 Response regulator receiver domain AI20_11260 PF00196 Bacterial regulatory proteins, luxR family AI20_11270 PF00072 Response regulator receiver domain AI20_11270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_11270 PF09456 RcsC Alpha-Beta-Loop (ABL) AI20_11270 PF00512 His Kinase A (phospho-acceptor) domain AI20_11280 PF01933 Uncharacterised protein family UPF0052 AI20_11290 PF13230 Glutamine amidotransferases class-II AI20_11295 PF13580 SIS domain AI20_11300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AI20_11300 PF02770 Acyl-CoA dehydrogenase, middle domain AI20_11300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AI20_11300 PF09317 Domain of unknown function (DUF1974) AI20_11310 PF11849 Domain of unknown function (DUF3369) AI20_11320 PF00929 Exonuclease AI20_11325 PF00075 RNase H AI20_11330 PF08241 Methyltransferase domain AI20_11335 PF16123 Hydroxyacylglutathione hydrolase C-terminus AI20_11335 PF00753 Metallo-beta-lactamase superfamily AI20_11340 PF01464 Transglycosylase SLT domain AI20_11340 PF01476 LysM domain AI20_11345 PF03372 Endonuclease/Exonuclease/phosphatase family AI20_11355 PF03061 Thioesterase superfamily AI20_11365 PF00356 Bacterial regulatory proteins, lacI family AI20_11370 PF14718 Soluble lytic murein transglycosylase L domain AI20_11370 PF01464 Transglycosylase SLT domain AI20_11375 PF00990 Diguanylate cyclase, GGDEF domain AI20_11375 PF03707 Bacterial signalling protein N terminal repeat AI20_11375 PF00563 EAL domain AI20_11380 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AI20_11400 PF04357 TamB, inner membrane protein subunit of TAM complex AI20_11405 PF17243 POTRA domain TamA domain 1 AI20_11405 PF07244 Surface antigen variable number repeat AI20_11405 PF01103 Surface antigen AI20_11420 PF01625 Peptide methionine sulfoxide reductase AI20_11430 PF02627 Carboxymuconolactone decarboxylase family AI20_11435 PF07992 Pyridine nucleotide-disulphide oxidoreductase AI20_11435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AI20_11435 PF00403 Heavy-metal-associated domain AI20_11440 PF13416 Bacterial extracellular solute-binding protein AI20_11450 PF00005 ABC transporter AI20_11455 PF01066 CDP-alcohol phosphatidyltransferase AI20_11460 PF13406 Transglycosylase SLT domain AI20_11475 PF01047 MarR family AI20_11485 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AI20_11485 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AI20_11485 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AI20_11485 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AI20_11490 PF03925 SeqA protein C-terminal domain AI20_11490 PF17206 SeqA protein N-terminal domain AI20_11495 PF12697 Alpha/beta hydrolase family AI20_11505 PF01402 Ribbon-helix-helix protein, copG family AI20_11510 PF00258 Flavodoxin AI20_11520 PF01475 Ferric uptake regulator family AI20_11525 PF00749 tRNA synthetases class I (E and Q), catalytic domain AI20_11525 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AI20_11530 PF03173 Putative carbohydrate binding domain AI20_11530 PF02838 Glycosyl hydrolase family 20, domain 2 AI20_11530 PF00728 Glycosyl hydrolase family 20, catalytic domain AI20_11530 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain AI20_11535 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AI20_11535 PF02378 Phosphotransferase system, EIIC AI20_11535 PF00367 phosphotransferase system, EIIB AI20_11540 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AI20_11545 PF01979 Amidohydrolase family AI20_11550 PF01047 MarR family AI20_11550 PF00480 ROK family AI20_11555 PF08019 Phosphoethanolamine transferase EptA/EptB AI20_11555 PF00884 Sulfatase AI20_11560 PF01709 Transcriptional regulator AI20_11565 PF01336 OB-fold nucleic acid binding domain AI20_11565 PF00152 tRNA synthetases class II (D, K and N) AI20_11565 PF02938 GAD domain AI20_11575 PF13649 Methyltransferase domain AI20_11580 PF08003 Protein of unknown function (DUF1698) AI20_11600 PF10417 C-terminal domain of 1-Cys peroxiredoxin AI20_11600 PF00578 AhpC/TSA family AI20_11605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_11605 PF03466 LysR substrate binding domain AI20_11610 PF07968 Leukocidin/Hemolysin toxin family AI20_11610 PF12563 Hemolytic toxin N terminal AI20_11620 PF00877 NlpC/P60 family AI20_11630 PF00171 Aldehyde dehydrogenase family AI20_11635 PF08359 YsiA-like protein, C-terminal region AI20_11635 PF00440 Bacterial regulatory proteins, tetR family AI20_11645 PF00465 Iron-containing alcohol dehydrogenase AI20_11655 PF00291 Pyridoxal-phosphate dependent enzyme AI20_11675 PF01554 MatE AI20_11685 PF04325 Protein of unknown function (DUF465) AI20_11690 PF12833 Helix-turn-helix domain AI20_11690 PF02311 AraC-like ligand binding domain AI20_11695 PF01804 Penicillin amidase AI20_11700 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AI20_11700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AI20_11700 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AI20_11700 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AI20_11700 PF10371 Domain of unknown function AI20_11705 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AI20_11705 PF07992 Pyridine nucleotide-disulphide oxidoreductase AI20_11705 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AI20_11710 PF03476 MOSC N-terminal beta barrel domain AI20_11710 PF03473 MOSC domain AI20_11710 PF00111 2Fe-2S iron-sulfur cluster binding domain AI20_11710 PF03476 MOSC N-terminal beta barrel domain AI20_11710 PF00111 2Fe-2S iron-sulfur cluster binding domain AI20_11710 PF03473 MOSC domain AI20_11715 PF08447 PAS fold AI20_11715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_11715 PF13426 PAS domain AI20_11720 PF01435 Peptidase family M48 AI20_11730 PF08241 Methyltransferase domain AI20_11730 PF12697 Alpha/beta hydrolase family AI20_11735 PF00155 Aminotransferase class I and II AI20_11740 PF04055 Radical SAM superfamily AI20_11740 PF06968 Biotin and Thiamin Synthesis associated domain AI20_11760 PF01336 OB-fold nucleic acid binding domain AI20_11760 PF00152 tRNA synthetases class II (D, K and N) AI20_11765 PF03605 Anaerobic c4-dicarboxylate membrane transporter AI20_11775 PF01546 Peptidase family M20/M25/M40 AI20_11775 PF07687 Peptidase dimerisation domain AI20_11780 PF03606 C4-dicarboxylate anaerobic carrier AI20_11790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_11790 PF03466 LysR substrate binding domain AI20_11795 PF03960 ArsC family AI20_11800 PF07687 Peptidase dimerisation domain AI20_11800 PF01546 Peptidase family M20/M25/M40 AI20_11805 PF02557 D-alanyl-D-alanine carboxypeptidase AI20_11815 PF02080 TrkA-C domain AI20_11815 PF03471 Transporter associated domain AI20_11815 PF00999 Sodium/hydrogen exchanger family AI20_11825 PF02080 TrkA-C domain AI20_11825 PF00999 Sodium/hydrogen exchanger family AI20_11825 PF03471 Transporter associated domain AI20_11835 PF01810 LysE type translocator AI20_11840 PF00672 HAMP domain AI20_11840 PF12729 Four helix bundle sensory module for signal transduction AI20_11840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_11845 PF07509 Protein of unknown function (DUF1523) AI20_11860 PF01156 Inosine-uridine preferring nucleoside hydrolase AI20_11865 PF00849 RNA pseudouridylate synthase AI20_11870 PF01048 Phosphorylase superfamily AI20_11875 PF00465 Iron-containing alcohol dehydrogenase AI20_11880 PF04355 SmpA / OmlA family AI20_11885 PF13460 NAD(P)H-binding AI20_11890 PF03658 RnfH family Ubiquitin AI20_11895 PF03364 Polyketide cyclase / dehydrase and lipid transport AI20_11900 PF01668 SmpB protein AI20_11905 PF08463 EcoEI R protein C-terminal AI20_11905 PF04851 Type III restriction enzyme, res subunit AI20_11905 PF00271 Helicase conserved C-terminal domain AI20_11905 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AI20_11910 PF12161 HsdM N-terminal domain AI20_11910 PF02384 N-6 DNA Methylase AI20_11915 PF01420 Type I restriction modification DNA specificity domain AI20_11940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_11940 PF03466 LysR substrate binding domain AI20_11945 PF00291 Pyridoxal-phosphate dependent enzyme AI20_11955 PF01740 STAS domain AI20_11955 PF00916 Sulfate permease family AI20_11960 PF00180 Isocitrate/isopropylmalate dehydrogenase AI20_11965 PF12833 Helix-turn-helix domain AI20_11970 PF01238 Phosphomannose isomerase type I AI20_11995 PF00155 Aminotransferase class I and II AI20_12000 PF00367 phosphotransferase system, EIIB AI20_12000 PF02378 Phosphotransferase system, EIIC AI20_12005 PF00356 Bacterial regulatory proteins, lacI family AI20_12005 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AI20_12015 PF00583 Acetyltransferase (GNAT) family AI20_12025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AI20_12025 PF02378 Phosphotransferase system, EIIC AI20_12025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AI20_12030 PF07690 Major Facilitator Superfamily AI20_12035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AI20_12045 PF00849 RNA pseudouridylate synthase AI20_12050 PF00293 NUDIX domain AI20_12060 PF04356 Protein of unknown function (DUF489) AI20_12065 PF08328 Adenylosuccinate lyase C-terminal AI20_12065 PF00206 Lyase AI20_12070 PF08007 Cupin superfamily protein AI20_12080 PF13508 Acetyltransferase (GNAT) domain AI20_12090 PF13417 Glutathione S-transferase, N-terminal domain AI20_12090 PF00043 Glutathione S-transferase, C-terminal domain AI20_12095 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AI20_12095 PF01243 Pyridoxamine 5'-phosphate oxidase AI20_12110 PF01029 NusB family AI20_12110 PF01189 16S rRNA methyltransferase RsmB/F AI20_12115 PF00462 Glutaredoxin AI20_12120 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AI20_12120 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AI20_12125 PF04333 MlaA lipoprotein AI20_12135 PF03918 Cytochrome C biogenesis protein AI20_12140 PF08534 Redoxin AI20_12145 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AI20_12145 PF01578 Cytochrome C assembly protein AI20_12150 PF03100 CcmE AI20_12155 PF04995 Heme exporter protein D (CcmD) AI20_12160 PF01578 Cytochrome C assembly protein AI20_12165 PF03379 CcmB protein AI20_12170 PF00005 ABC transporter AI20_12180 PF01584 CheW-like domain AI20_12190 PF13614 AAA domain AI20_12195 PF00691 OmpA family AI20_12195 PF13677 Membrane MotB of proton-channel complex MotA/MotB AI20_12200 PF01618 MotA/TolQ/ExbB proton channel family AI20_12205 PF00072 Response regulator receiver domain AI20_12205 PF01339 CheB methylesterase AI20_12210 PF01584 CheW-like domain AI20_12210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_12210 PF01627 Hpt domain AI20_12210 PF07194 P2 response regulator binding domain AI20_12210 PF02895 Signal transducing histidine kinase, homodimeric domain AI20_12215 PF04344 Chemotaxis phosphatase, CheZ AI20_12220 PF00072 Response regulator receiver domain AI20_12225 PF04545 Sigma-70, region 4 AI20_12225 PF04542 Sigma-70 region 2 AI20_12225 PF04539 Sigma-70 region 3 AI20_12230 PF10609 NUBPL iron-transfer P-loop NTPase AI20_12235 PF00448 SRP54-type protein, GTPase domain AI20_12240 PF00771 FHIPEP family AI20_12245 PF01312 FlhB HrpN YscU SpaS Family AI20_12250 PF01311 Bacterial export proteins, family 1 AI20_12255 PF01313 Bacterial export proteins, family 3 AI20_12260 PF00813 FliP family AI20_12265 PF04347 Flagellar biosynthesis protein, FliO AI20_12270 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AI20_12275 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AI20_12275 PF02154 Flagellar motor switch protein FliM AI20_12295 PF18269 T3SS EscN ATPase C-terminal domain AI20_12295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AI20_12305 PF14842 FliG N-terminal domain AI20_12305 PF14841 FliG middle domain AI20_12305 PF01706 FliG C-terminal domain AI20_12310 PF01514 Secretory protein of YscJ/FliF family AI20_12310 PF08345 Flagellar M-ring protein C-terminal AI20_12315 PF02049 Flagellar hook-basal body complex protein FliE AI20_12330 PF03960 ArsC family AI20_12335 PF01758 Sodium Bile acid symporter family AI20_12340 PF02374 Anion-transporting ATPase AI20_12345 PF06953 Arsenical resistance operon trans-acting repressor ArsD AI20_12350 PF01022 Bacterial regulatory protein, arsR family AI20_12355 PF02001 Protein of unknown function DUF134 AI20_12365 PF00072 Response regulator receiver domain AI20_12370 PF04055 Radical SAM superfamily AI20_12370 PF18693 TRAM domain AI20_12370 PF00919 Uncharacterized protein family UPF0004 AI20_12375 PF11647 Membrane Localization Domain AI20_12375 PF07634 RtxA repeat AI20_12375 PF12146 Serine aminopeptidase, S33 AI20_12375 PF16671 Actin cross-linking domain AI20_12375 PF11713 Peptidase C80 family AI20_12390 PF00005 ABC transporter AI20_12390 PF03412 Peptidase C39 family AI20_12390 PF00664 ABC transporter transmembrane region AI20_12400 PF00664 ABC transporter transmembrane region AI20_12400 PF00005 ABC transporter AI20_12400 PF03412 Peptidase C39 family AI20_12405 PF00072 Response regulator receiver domain AI20_12405 PF00486 Transcriptional regulatory protein, C terminal AI20_12415 PF02685 Glucokinase AI20_12420 PF01380 SIS domain AI20_12420 PF01418 Helix-turn-helix domain, rpiR family AI20_12425 PF02887 Pyruvate kinase, alpha/beta domain AI20_12425 PF00224 Pyruvate kinase, barrel domain AI20_12435 PF00873 AcrB/AcrD/AcrF family AI20_12440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AI20_12440 PF02770 Acyl-CoA dehydrogenase, middle domain AI20_12440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AI20_12440 PF09317 Domain of unknown function (DUF1974) AI20_12445 PF00440 Bacterial regulatory proteins, tetR family AI20_12460 PF00384 Molybdopterin oxidoreductase AI20_12465 PF02634 FdhD/NarQ family AI20_12470 PF03466 LysR substrate binding domain AI20_12470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_12490 PF00936 BMC domain AI20_12495 PF00936 BMC domain AI20_12500 PF00936 BMC domain AI20_12505 PF00465 Iron-containing alcohol dehydrogenase AI20_12505 PF00171 Aldehyde dehydrogenase family AI20_12515 PF00465 Iron-containing alcohol dehydrogenase AI20_12515 PF00171 Aldehyde dehydrogenase family AI20_12520 PF02901 Pyruvate formate lyase-like AI20_12520 PF01228 Glycine radical AI20_12525 PF04055 Radical SAM superfamily AI20_12525 PF13187 4Fe-4S dicluster domain AI20_12530 PF00936 BMC domain AI20_12535 PF06130 Phosphate propanoyltransferase AI20_12545 PF00893 Small Multidrug Resistance protein AI20_12550 PF00893 Small Multidrug Resistance protein AI20_12555 PF13426 PAS domain AI20_12555 PF00512 His Kinase A (phospho-acceptor) domain AI20_12555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_12555 PF00672 HAMP domain AI20_12560 PF00486 Transcriptional regulatory protein, C terminal AI20_12560 PF00072 Response regulator receiver domain AI20_12565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AI20_12565 PF00529 HlyD membrane-fusion protein of T1SS AI20_12570 PF00873 AcrB/AcrD/AcrF family AI20_12595 PF03734 L,D-transpeptidase catalytic domain AI20_12595 PF01476 LysM domain AI20_12595 PF17969 L,D-transpeptidase C-terminal domain AI20_12610 PF05971 RNA methyltransferase AI20_12615 PF00877 NlpC/P60 family AI20_12620 PF01648 4'-phosphopantetheinyl transferase superfamily AI20_12625 PF00085 Thioredoxin AI20_12635 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AI20_12645 PF01842 ACT domain AI20_12645 PF00551 Formyl transferase AI20_12655 PF13396 Phospholipase_D-nuclease N-terminal AI20_12655 PF13091 PLD-like domain AI20_12670 PF01551 Peptidase family M23 AI20_12680 PF00128 Alpha amylase, catalytic domain AI20_12690 PF00230 Major intrinsic protein AI20_12695 PF02075 Crossover junction endodeoxyribonuclease RuvC AI20_12700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AI20_12735 PF08497 Radical SAM N-terminal AI20_12735 PF04055 Radical SAM superfamily AI20_12735 PF11842 Domain of unknown function (DUF3362) AI20_12750 PF00171 Aldehyde dehydrogenase family AI20_12760 PF01810 LysE type translocator AI20_12770 PF04055 Radical SAM superfamily AI20_12770 PF08497 Radical SAM N-terminal AI20_12770 PF11842 Domain of unknown function (DUF3362) AI20_12780 PF00873 AcrB/AcrD/AcrF family AI20_12785 PF00529 HlyD membrane-fusion protein of T1SS AI20_12785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AI20_12790 PF00990 Diguanylate cyclase, GGDEF domain AI20_12795 PF01734 Patatin-like phospholipase AI20_12800 PF00209 Sodium:neurotransmitter symporter family AI20_12815 PF01389 OmpA-like transmembrane domain AI20_12815 PF00691 OmpA family AI20_12820 PF01389 OmpA-like transmembrane domain AI20_12820 PF00691 OmpA family AI20_12825 PF00691 OmpA family AI20_12825 PF01389 OmpA-like transmembrane domain AI20_12830 PF00390 Malic enzyme, N-terminal domain AI20_12830 PF03949 Malic enzyme, NAD binding domain AI20_12835 PF06719 AraC-type transcriptional regulator N-terminus AI20_12835 PF12833 Helix-turn-helix domain AI20_12840 PF01554 MatE AI20_12845 PF10692 Protein of unknown function (DUF2498) AI20_12850 PF00072 Response regulator receiver domain AI20_12850 PF00990 Diguanylate cyclase, GGDEF domain AI20_12855 PF00860 Permease family AI20_12865 PF01235 Sodium:alanine symporter family AI20_12870 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AI20_12870 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AI20_12875 PF01699 Sodium/calcium exchanger protein AI20_12880 PF00462 Glutaredoxin AI20_12880 PF08534 Redoxin AI20_12890 PF00293 NUDIX domain AI20_12900 PF00005 ABC transporter AI20_12905 PF00528 Binding-protein-dependent transport system inner membrane component AI20_12910 PF00528 Binding-protein-dependent transport system inner membrane component AI20_12915 PF00497 Bacterial extracellular solute-binding proteins, family 3 AI20_12930 PF00005 ABC transporter AI20_12935 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AI20_12935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AI20_12945 PF03932 CutC family AI20_12950 PF00480 ROK family AI20_12960 PF01435 Peptidase family M48 AI20_12965 PF12849 PBP superfamily domain AI20_12970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_12970 PF00512 His Kinase A (phospho-acceptor) domain AI20_12970 PF11808 Phosphate regulon sensor protein PhoR AI20_12970 PF00989 PAS fold AI20_12975 PF00072 Response regulator receiver domain AI20_12975 PF00486 Transcriptional regulatory protein, C terminal AI20_12980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AI20_12985 PF02515 CoA-transferase family III AI20_12990 PF02770 Acyl-CoA dehydrogenase, middle domain AI20_12990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AI20_12990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AI20_12995 PF02954 Bacterial regulatory protein, Fis family AI20_12995 PF01590 GAF domain AI20_12995 PF00158 Sigma-54 interaction domain AI20_13000 PF00171 Aldehyde dehydrogenase family AI20_13010 PF00892 EamA-like transporter family AI20_13015 PF12431 Transcriptional regulator AI20_13015 PF00072 Response regulator receiver domain AI20_13020 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AI20_13020 PF00989 PAS fold AI20_13020 PF17203 Single cache domain 3 AI20_13020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_13025 PF03949 Malic enzyme, NAD binding domain AI20_13025 PF00390 Malic enzyme, N-terminal domain AI20_13030 PF03390 2-hydroxycarboxylate transporter family AI20_13040 PF01047 MarR family AI20_13045 PF00529 HlyD membrane-fusion protein of T1SS AI20_13045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AI20_13080 PF13597 Anaerobic ribonucleoside-triphosphate reductase AI20_13080 PF03477 ATP cone domain AI20_13090 PF01653 NAD-dependent DNA ligase adenylation domain AI20_13090 PF03120 NAD-dependent DNA ligase OB-fold domain AI20_13090 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AI20_13090 PF12826 Helix-hairpin-helix motif AI20_13090 PF00533 BRCA1 C Terminus (BRCT) domain AI20_13095 PF04354 ZipA, C-terminal FtsZ-binding domain AI20_13100 PF06470 SMC proteins Flexible Hinge Domain AI20_13100 PF02463 RecF/RecN/SMC N terminal domain AI20_13110 PF03458 UPF0126 domain AI20_13120 PF05951 Bacterial protein of unknown function (DUF882) AI20_13125 PF03734 L,D-transpeptidase catalytic domain AI20_13125 PF01471 Putative peptidoglycan binding domain AI20_13140 PF00535 Glycosyl transferase family 2 AI20_13155 PF00128 Alpha amylase, catalytic domain AI20_13165 PF00196 Bacterial regulatory proteins, luxR family AI20_13165 PF00072 Response regulator receiver domain AI20_13190 PF00999 Sodium/hydrogen exchanger family AI20_13190 PF02080 TrkA-C domain AI20_13190 PF02254 TrkA-N domain AI20_13195 PF00990 Diguanylate cyclase, GGDEF domain AI20_13200 PF01171 PP-loop family AI20_13200 PF11734 TilS substrate C-terminal domain AI20_13200 PF09179 TilS substrate binding domain AI20_13205 PF05649 Peptidase family M13 AI20_13205 PF01431 Peptidase family M13 AI20_13215 PF00005 ABC transporter AI20_13215 PF12848 ABC transporter AI20_13215 PF16326 ABC transporter C-terminal domain AI20_13220 PF13302 Acetyltransferase (GNAT) domain AI20_13225 PF13520 Amino acid permease AI20_13235 PF03466 LysR substrate binding domain AI20_13235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_13245 PF08543 Phosphomethylpyrimidine kinase AI20_13250 PF01276 Orn/Lys/Arg decarboxylase, major domain AI20_13250 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AI20_13250 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AI20_13255 PF13520 Amino acid permease AI20_13260 PF00486 Transcriptional regulatory protein, C terminal AI20_13260 PF18500 CadC C-terminal domain 1 AI20_13265 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AI20_13270 PF07733 Bacterial DNA polymerase III alpha NTPase domain AI20_13270 PF02811 PHP domain AI20_13270 PF14579 Helix-hairpin-helix motif AI20_13270 PF01336 OB-fold nucleic acid binding domain AI20_13270 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AI20_13275 PF01351 Ribonuclease HII AI20_13280 PF02684 Lipid-A-disaccharide synthetase AI20_13285 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AI20_13285 PF00132 Bacterial transferase hexapeptide (six repeats) AI20_13290 PF07977 FabA-like domain AI20_13295 PF00132 Bacterial transferase hexapeptide (six repeats) AI20_13295 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AI20_13300 PF03938 Outer membrane protein (OmpH-like) AI20_13305 PF01103 Surface antigen AI20_13305 PF07244 Surface antigen variable number repeat AI20_13310 PF02163 Peptidase family M50 AI20_13310 PF17820 PDZ domain AI20_13315 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AI20_13315 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AI20_13315 PF13288 DXP reductoisomerase C-terminal domain AI20_13325 PF01255 Putative undecaprenyl diphosphate synthase AI20_13330 PF01765 Ribosome recycling factor AI20_13335 PF00696 Amino acid kinase family AI20_13340 PF00889 Elongation factor TS AI20_13345 PF00318 Ribosomal protein S2 AI20_13350 PF00557 Metallopeptidase family M24 AI20_13355 PF01842 ACT domain AI20_13355 PF08335 GlnD PII-uridylyltransferase AI20_13355 PF01966 HD domain AI20_13355 PF01909 Nucleotidyltransferase domain AI20_13360 PF14602 Hexapeptide repeat of succinyl-transferase AI20_13360 PF00132 Bacterial transferase hexapeptide (six repeats) AI20_13360 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AI20_13365 PF11944 Protein of unknown function (DUF3461) AI20_13370 PF00367 phosphotransferase system, EIIB AI20_13370 PF02378 Phosphotransferase system, EIIC AI20_13375 PF07148 Maltose operon periplasmic protein precursor (MalM) AI20_13380 PF02264 LamB porin AI20_13385 PF00258 Flavodoxin AI20_13390 PF00849 RNA pseudouridylate synthase AI20_13395 PF04287 tRNA pseudouridine synthase C AI20_13420 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) AI20_13425 PF07348 Syd protein (SUKH-2) AI20_13430 PF14489 QueF-like protein AI20_13430 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AI20_13440 PF00990 Diguanylate cyclase, GGDEF domain AI20_13445 PF11892 Domain of unknown function (DUF3412) AI20_13445 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AI20_13445 PF03641 Possible lysine decarboxylase AI20_13450 PF01367 5'-3' exonuclease, C-terminal SAM fold AI20_13450 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AI20_13455 PF18324 Hypothetical protein TT1725 AI20_13455 PF00180 Isocitrate/isopropylmalate dehydrogenase AI20_13465 PF01728 FtsJ-like methyltransferase AI20_13465 PF18125 RlmM ferredoxin-like domain AI20_13470 PF04241 Protein of unknown function (DUF423) AI20_13480 PF03466 LysR substrate binding domain AI20_13480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_13485 PF00672 HAMP domain AI20_13485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_13490 PF11798 IMS family HHH motif AI20_13490 PF11799 impB/mucB/samB family C-terminal domain AI20_13490 PF00817 impB/mucB/samB family AI20_13505 PF02424 ApbE family AI20_13510 PF00111 2Fe-2S iron-sulfur cluster binding domain AI20_13510 PF00970 Oxidoreductase FAD-binding domain AI20_13510 PF00175 Oxidoreductase NAD-binding domain AI20_13515 PF02508 Rnf-Nqr subunit, membrane protein AI20_13520 PF02508 Rnf-Nqr subunit, membrane protein AI20_13525 PF04205 FMN-binding domain AI20_13530 PF03116 NQR2, RnfD, RnfE family AI20_13535 PF11973 NQRA C-terminal domain AI20_13535 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AI20_13540 PF01722 BolA-like protein AI20_13545 PF05175 Methyltransferase small domain AI20_13555 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AI20_13565 PF07690 Major Facilitator Superfamily AI20_13570 PF03502 Nucleoside-specific channel-forming protein, Tsx AI20_13575 PF04461 Protein of unknown function (DUF520) AI20_13580 PF02558 Ketopantoate reductase PanE/ApbA AI20_13580 PF08546 Ketopantoate reductase PanE/ApbA C terminal AI20_13585 PF01965 DJ-1/PfpI family AI20_13590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AI20_13590 PF00205 Thiamine pyrophosphate enzyme, central domain AI20_13590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AI20_13595 PF03306 Alpha-acetolactate decarboxylase AI20_13600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_13600 PF03466 LysR substrate binding domain AI20_13635 PF05638 Type VI secretion system effector, Hcp AI20_13640 PF03472 Autoinducer binding domain AI20_13640 PF00196 Bacterial regulatory proteins, luxR family AI20_13655 PF06965 Na+/H+ antiporter 1 AI20_13655 PF13462 Thioredoxin AI20_13660 PF16363 GDP-mannose 4,6 dehydratase AI20_13665 PF00175 Oxidoreductase NAD-binding domain AI20_13665 PF00042 Globin AI20_13665 PF00970 Oxidoreductase FAD-binding domain AI20_13670 PF03063 Prismane/CO dehydrogenase family AI20_13675 PF00210 Ferritin-like domain AI20_13715 PF00106 short chain dehydrogenase AI20_13725 PF00875 DNA photolyase AI20_13725 PF03441 FAD binding domain of DNA photolyase AI20_13730 PF13411 MerR HTH family regulatory protein AI20_13735 PF08349 Protein of unknown function (DUF1722) AI20_13765 PF01817 Chorismate mutase type II AI20_13765 PF00800 Prephenate dehydratase AI20_13790 PF01527 Transposase AI20_13800 PF17862 AAA+ lid domain AI20_13800 PF01434 Peptidase family M41 AI20_13800 PF00004 ATPase family associated with various cellular activities (AAA) AI20_13850 PF09588 YqaJ-like viral recombinase domain AI20_13895 PF04002 RadC-like JAB domain AI20_13940 PF00176 SNF2 family N-terminal domain AI20_13940 PF12137 RNA polymerase recycling family C-terminal AI20_13940 PF00271 Helicase conserved C-terminal domain AI20_13940 PF18339 RapA N-terminal Tudor like domain 1 AI20_13940 PF18337 RapA N-terminal Tudor like domain AI20_13945 PF00145 C-5 cytosine-specific DNA methylase AI20_13955 PF13438 Domain of unknown function (DUF4113) AI20_13955 PF00817 impB/mucB/samB family AI20_13955 PF11799 impB/mucB/samB family C-terminal domain AI20_13980 PF00455 DeoR C terminal sensor domain AI20_13980 PF08220 DeoR-like helix-turn-helix domain AI20_13985 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AI20_13985 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AI20_13990 PF07005 Sugar-binding N-terminal domain AI20_13990 PF17042 Nucleotide-binding C-terminal domain AI20_13995 PF00596 Class II Aldolase and Adducin N-terminal domain AI20_14000 PF01261 Xylose isomerase-like TIM barrel AI20_14005 PF01370 NAD dependent epimerase/dehydratase family AI20_14010 PF02447 GntP family permease AI20_14020 PF02743 Cache domain AI20_14020 PF00672 HAMP domain AI20_14020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_14025 PF03573 outer membrane porin, OprD family AI20_14030 PF00106 short chain dehydrogenase AI20_14055 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AI20_14065 PF00730 HhH-GPD superfamily base excision DNA repair protein AI20_14065 PF12833 Helix-turn-helix domain AI20_14065 PF02805 Metal binding domain of Ada AI20_14065 PF06029 AlkA N-terminal domain AI20_14070 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AI20_14070 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AI20_14085 PF12392 Collagenase AI20_14085 PF01136 Peptidase family U32 AI20_14090 PF01810 LysE type translocator AI20_14095 PF03466 LysR substrate binding domain AI20_14095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_14105 PF00672 HAMP domain AI20_14105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_14120 PF01584 CheW-like domain AI20_14120 PF09078 CheY binding AI20_14120 PF01627 Hpt domain AI20_14120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_14120 PF02895 Signal transducing histidine kinase, homodimeric domain AI20_14125 PF00672 HAMP domain AI20_14125 PF12729 Four helix bundle sensory module for signal transduction AI20_14125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_14130 PF01584 CheW-like domain AI20_14135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_14135 PF00672 HAMP domain AI20_14140 PF01739 CheR methyltransferase, SAM binding domain AI20_14140 PF03705 CheR methyltransferase, all-alpha domain AI20_14145 PF03975 CheD chemotactic sensory transduction AI20_14150 PF00072 Response regulator receiver domain AI20_14150 PF01339 CheB methylesterase AI20_14155 PF00266 Aminotransferase class-V AI20_14190 PF12838 4Fe-4S dicluster domain AI20_14200 PF00842 Alanine racemase, C-terminal domain AI20_14200 PF01168 Alanine racemase, N-terminal domain AI20_14205 PF00772 DnaB-like helicase N terminal domain AI20_14205 PF03796 DnaB-like helicase C terminal domain AI20_14220 PF00563 EAL domain AI20_14220 PF12792 CSS motif domain associated with EAL AI20_14225 PF02872 5'-nucleotidase, C-terminal domain AI20_14225 PF00149 Calcineurin-like phosphoesterase AI20_14245 PF00072 Response regulator receiver domain AI20_14245 PF02954 Bacterial regulatory protein, Fis family AI20_14245 PF00158 Sigma-54 interaction domain AI20_14250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AI20_14250 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AI20_14260 PF04102 SlyX AI20_14265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AI20_14270 PF09526 Probable metal-binding protein (DUF2387) AI20_14280 PF01584 CheW-like domain AI20_14280 PF00072 Response regulator receiver domain AI20_14285 PF00561 alpha/beta hydrolase fold AI20_14290 PF06794 Uncharacterised protein family (UPF0270) AI20_14295 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AI20_14295 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AI20_14295 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AI20_14300 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AI20_14305 PF00535 Glycosyl transferase family 2 AI20_14310 PF01370 NAD dependent epimerase/dehydratase family AI20_14310 PF00551 Formyl transferase AI20_14310 PF02911 Formyl transferase, C-terminal domain AI20_14315 PF01522 Polysaccharide deacetylase AI20_14320 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AI20_14325 PF00892 EamA-like transporter family AI20_14330 PF00893 Small Multidrug Resistance protein AI20_14335 PF00485 Phosphoribulokinase / Uridine kinase family AI20_14350 PF02566 OsmC-like protein AI20_14355 PF00027 Cyclic nucleotide-binding domain AI20_14355 PF13545 Crp-like helix-turn-helix domain AI20_14360 PF08241 Methyltransferase domain AI20_14365 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AI20_14365 PF18416 N-acetylglucosamine binding protein domain 2 AI20_14370 PF12561 ToxR activated gene A lipoprotein domain AI20_14370 PF17945 Beta/Gamma crystallin AI20_14375 PF00704 Glycosyl hydrolases family 18 AI20_14375 PF08329 Chitinase A, N-terminal domain AI20_14380 PF00512 His Kinase A (phospho-acceptor) domain AI20_14380 PF00989 PAS fold AI20_14380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_14390 PF13443 Cro/C1-type HTH DNA-binding domain AI20_14400 PF12832 MFS_1 like family AI20_14405 PF07715 TonB-dependent Receptor Plug Domain AI20_14405 PF00593 TonB dependent receptor AI20_14425 PF01243 Pyridoxamine 5'-phosphate oxidase AI20_14430 PF06228 Haem utilisation ChuX/HutX AI20_14440 PF01032 FecCD transport family AI20_14445 PF00005 ABC transporter AI20_14460 PF01370 NAD dependent epimerase/dehydratase family AI20_14470 PF01464 Transglycosylase SLT domain AI20_14475 PF01048 Phosphorylase superfamily AI20_14490 PF12848 ABC transporter AI20_14490 PF00005 ABC transporter AI20_14500 PF00860 Permease family AI20_14505 PF00226 DnaJ domain AI20_14505 PF05099 Tellurite resistance protein TerB AI20_14510 PF00483 Nucleotidyl transferase AI20_14515 PF01636 Phosphotransferase enzyme family AI20_14520 PF04453 LPS transport system D AI20_14520 PF03968 OstA-like protein AI20_14525 PF00639 PPIC-type PPIASE domain AI20_14525 PF09312 SurA N-terminal domain AI20_14530 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AI20_14535 PF00398 Ribosomal RNA adenine dimethylase AI20_14540 PF04379 ApaG domain AI20_14545 PF00149 Calcineurin-like phosphoesterase AI20_14555 PF00296 Luciferase-like monooxygenase AI20_14575 PF13193 AMP-binding enzyme C-terminal domain AI20_14575 PF00501 AMP-binding enzyme AI20_14585 PF01018 GTP1/OBG AI20_14585 PF01926 50S ribosome-binding GTPase AI20_14590 PF01016 Ribosomal L27 protein AI20_14600 PF00348 Polyprenyl synthetase AI20_14605 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AI20_14610 PF01145 SPFH domain / Band 7 family AI20_14615 PF12221 Bacterial membrane protein N terminal AI20_14615 PF01145 SPFH domain / Band 7 family AI20_14620 PF16360 GTP-binding GTPase Middle Region AI20_14620 PF01926 50S ribosome-binding GTPase AI20_14620 PF13167 GTP-binding GTPase N-terminal AI20_14625 PF17209 Hfq protein AI20_14635 PF08676 MutL C terminal dimerisation domain AI20_14635 PF01119 DNA mismatch repair protein, C-terminal domain AI20_14645 PF01520 N-acetylmuramoyl-L-alanine amidase AI20_14650 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AI20_14655 PF03853 YjeF-related protein N-terminus AI20_14655 PF01256 Carbohydrate kinase AI20_14660 PF08331 Domain of unknown function (DUF1730) AI20_14665 PF00480 ROK family AI20_14680 PF00005 ABC transporter AI20_14680 PF09383 NIL domain AI20_14685 PF00528 Binding-protein-dependent transport system inner membrane component AI20_14690 PF03180 NLPA lipoprotein AI20_14695 PF02357 Transcription termination factor nusG AI20_14700 PF12729 Four helix bundle sensory module for signal transduction AI20_14700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_14700 PF00672 HAMP domain AI20_14705 PF00990 Diguanylate cyclase, GGDEF domain AI20_14705 PF00563 EAL domain AI20_14705 PF03707 Bacterial signalling protein N terminal repeat AI20_14710 PF09456 RcsC Alpha-Beta-Loop (ABL) AI20_14710 PF00512 His Kinase A (phospho-acceptor) domain AI20_14710 PF00072 Response regulator receiver domain AI20_14710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_14720 PF13286 Phosphohydrolase-associated domain AI20_14720 PF01966 HD domain AI20_14725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_14725 PF00072 Response regulator receiver domain AI20_14725 PF00989 PAS fold AI20_14725 PF00512 His Kinase A (phospho-acceptor) domain AI20_14725 PF18415 Histidine kinase receptor ArcB trans-membrane domain AI20_14725 PF01627 Hpt domain AI20_14745 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AI20_14750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_14750 PF03466 LysR substrate binding domain AI20_14760 PF01259 SAICAR synthetase AI20_14765 PF06804 NlpB/DapX lipoprotein AI20_14770 PF00701 Dihydrodipicolinate synthetase family AI20_14775 PF01842 ACT domain AI20_14780 PF00578 AhpC/TSA family AI20_14785 PF03887 YfbU domain AI20_14790 PF04217 Protein of unknown function, DUF412 AI20_14795 PF00871 Acetokinase family AI20_14800 PF01515 Phosphate acetyl/butaryl transferase AI20_14800 PF07085 DRTGG domain AI20_14805 PF10369 Small subunit of acetolactate synthase AI20_14810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AI20_14810 PF00205 Thiamine pyrophosphate enzyme, central domain AI20_14810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AI20_14825 PF01569 PAP2 superfamily AI20_14835 PF00682 HMGL-like AI20_14835 PF08502 LeuA allosteric (dimerisation) domain AI20_14840 PF00180 Isocitrate/isopropylmalate dehydrogenase AI20_14845 PF00330 Aconitase family (aconitate hydratase) AI20_14850 PF00694 Aconitase C-terminal domain AI20_14870 PF00528 Binding-protein-dependent transport system inner membrane component AI20_14875 PF00005 ABC transporter AI20_14880 PF13638 PIN domain AI20_14880 PF02562 PhoH-like protein AI20_14890 PF08343 Ribonucleotide reductase N-terminal AI20_14890 PF00317 Ribonucleotide reductase, all-alpha domain AI20_14890 PF02867 Ribonucleotide reductase, barrel domain AI20_14925 PF18337 RapA N-terminal Tudor like domain AI20_14925 PF00176 SNF2 family N-terminal domain AI20_14925 PF12137 RNA polymerase recycling family C-terminal AI20_14925 PF00271 Helicase conserved C-terminal domain AI20_14925 PF18339 RapA N-terminal Tudor like domain 1 AI20_14930 PF00849 RNA pseudouridylate synthase AI20_14935 PF03707 Bacterial signalling protein N terminal repeat AI20_14935 PF13188 PAS domain AI20_14935 PF00990 Diguanylate cyclase, GGDEF domain AI20_14935 PF00563 EAL domain AI20_14945 PF00118 TCP-1/cpn60 chaperonin family AI20_14950 PF00166 Chaperonin 10 Kd subunit AI20_14960 PF04186 FxsA cytoplasmic membrane protein AI20_14965 PF00206 Lyase AI20_14965 PF10415 Fumarase C C-terminus AI20_14970 PF03605 Anaerobic c4-dicarboxylate membrane transporter AI20_14975 PF00267 Gram-negative porin AI20_14980 PF07690 Major Facilitator Superfamily AI20_14985 PF03466 LysR substrate binding domain AI20_14985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_14990 PF02868 Thermolysin metallopeptidase, alpha-helical domain AI20_14990 PF04151 Bacterial pre-peptidase C-terminal domain AI20_14990 PF03413 Peptidase propeptide and YPEB domain AI20_14990 PF01447 Thermolysin metallopeptidase, catalytic domain AI20_14990 PF07504 Fungalysin/Thermolysin Propeptide Motif AI20_14995 PF13302 Acetyltransferase (GNAT) domain AI20_15000 PF13302 Acetyltransferase (GNAT) domain AI20_15010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AI20_15010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AI20_15015 PF07690 Major Facilitator Superfamily AI20_15020 PF01725 Ham1 family AI20_15025 PF06969 HemN C-terminal domain AI20_15025 PF04055 Radical SAM superfamily AI20_15030 PF03889 Alternative ribosome-rescue factor A AI20_15040 PF13411 MerR HTH family regulatory protein AI20_15045 PF01808 AICARFT/IMPCHase bienzyme AI20_15045 PF02142 MGS-like domain AI20_15050 PF02844 Phosphoribosylglycinamide synthetase, N domain AI20_15050 PF02843 Phosphoribosylglycinamide synthetase, C domain AI20_15050 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AI20_15070 PF04546 Sigma-70, non-essential region AI20_15070 PF03979 Sigma-70 factor, region 1.1 AI20_15070 PF04545 Sigma-70, region 4 AI20_15070 PF04539 Sigma-70 region 3 AI20_15070 PF04542 Sigma-70 region 2 AI20_15070 PF00140 Sigma-70 factor, region 1.2 AI20_15075 PF08275 DNA primase catalytic core, N-terminal domain AI20_15075 PF01807 CHC2 zinc finger AI20_15075 PF10410 DnaB-helicase binding domain of primase AI20_15075 PF08278 DNA primase DnaG DnaB-binding AI20_15080 PF09424 Yqey-like protein AI20_15090 PF00814 Glycoprotease family AI20_15095 PF04539 Sigma-70 region 3 AI20_15095 PF04545 Sigma-70, region 4 AI20_15095 PF04542 Sigma-70 region 2 AI20_15095 PF00140 Sigma-70 factor, region 1.2 AI20_15100 PF01551 Peptidase family M23 AI20_15100 PF01476 LysM domain AI20_15105 PF09335 SNARE associated Golgi protein AI20_15115 PF01975 Survival protein SurE AI20_15120 PF01142 tRNA pseudouridine synthase D (TruD) AI20_15125 PF02542 YgbB family AI20_15130 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AI20_15135 PF04977 Septum formation initiator AI20_15140 PF00113 Enolase, C-terminal TIM barrel domain AI20_15140 PF03952 Enolase, N-terminal domain AI20_15145 PF06418 CTP synthase N-terminus AI20_15145 PF00117 Glutamine amidotransferase class-I AI20_15150 PF03819 MazG nucleotide pyrophosphohydrolase domain AI20_15155 PF13291 ACT domain AI20_15155 PF02824 TGS domain AI20_15155 PF04607 Region found in RelA / SpoT proteins AI20_15160 PF05958 tRNA (Uracil-5-)-methyltransferase AI20_15160 PF01938 TRAM domain AI20_15165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_15165 PF00672 HAMP domain AI20_15165 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AI20_15165 PF00512 His Kinase A (phospho-acceptor) domain AI20_15165 PF01627 Hpt domain AI20_15165 PF00072 Response regulator receiver domain AI20_15170 PF07308 Protein of unknown function (DUF1456) AI20_15175 PF01510 N-acetylmuramoyl-L-alanine amidase AI20_15180 PF08220 DeoR-like helix-turn-helix domain AI20_15180 PF00455 DeoR C terminal sensor domain AI20_15185 PF08013 Tagatose 6 phosphate kinase AI20_15190 PF01380 SIS domain AI20_15195 PF03830 PTS system sorbose subfamily IIB component AI20_15200 PF03609 PTS system sorbose-specific iic component AI20_15205 PF03613 PTS system mannose/fructose/sorbose family IID component AI20_15210 PF03610 PTS system fructose IIA component AI20_15215 PF01979 Amidohydrolase family AI20_15220 PF01116 Fructose-bisphosphate aldolase class-II AI20_15225 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AI20_15230 PF11967 Recombination protein O N terminal AI20_15230 PF02565 Recombination protein O C terminal AI20_15235 PF01926 50S ribosome-binding GTPase AI20_15235 PF07650 KH domain AI20_15240 PF00035 Double-stranded RNA binding motif AI20_15240 PF14622 Ribonuclease-III-like AI20_15245 PF10502 Signal peptidase, peptidase S26 AI20_15250 PF00679 Elongation factor G C-terminus AI20_15250 PF00009 Elongation factor Tu GTP binding domain AI20_15250 PF03144 Elongation factor Tu domain 2 AI20_15250 PF06421 GTP-binding protein LepA C-terminus AI20_15260 PF17188 MucB/RseB C-terminal domain AI20_15260 PF03888 MucB/RseB N-terminal domain AI20_15265 PF03872 Anti sigma-E protein RseA, N-terminal domain AI20_15265 PF03873 Anti sigma-E protein RseA, C-terminal domain AI20_15270 PF08281 Sigma-70, region 4 AI20_15270 PF04542 Sigma-70 region 2 AI20_15275 PF00890 FAD binding domain AI20_15275 PF02910 Fumarate reductase flavoprotein C-term AI20_15285 PF03937 Flavinator of succinate dehydrogenase AI20_15290 PF01571 Aminomethyltransferase folate-binding domain AI20_15295 PF03466 LysR substrate binding domain AI20_15295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_15310 PF03091 CutA1 divalent ion tolerance protein AI20_15315 PF02683 Cytochrome C biogenesis protein transmembrane region AI20_15315 PF11412 Disulphide bond corrector protein DsbC AI20_15335 PF01266 FAD dependent oxidoreductase AI20_15340 PF01116 Fructose-bisphosphate aldolase class-II AI20_15345 PF00162 Phosphoglycerate kinase AI20_15350 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AI20_15350 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AI20_15355 PF00480 ROK family AI20_15360 PF01208 Uroporphyrinogen decarboxylase (URO-D) AI20_15365 PF00293 NUDIX domain AI20_15365 PF09297 NADH pyrophosphatase zinc ribbon domain AI20_15370 PF00171 Aldehyde dehydrogenase family AI20_15370 PF01619 Proline dehydrogenase AI20_15370 PF14850 DNA-binding domain of Proline dehydrogenase AI20_15370 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AI20_15375 PF08239 Bacterial SH3 domain AI20_15380 PF00027 Cyclic nucleotide-binding domain AI20_15380 PF00520 Ion transport protein AI20_15385 PF00672 HAMP domain AI20_15385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_15385 PF02743 Cache domain AI20_15395 PF08335 GlnD PII-uridylyltransferase AI20_15395 PF03710 Glutamate-ammonia ligase adenylyltransferase AI20_15410 PF05170 AsmA family AI20_15415 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AI20_15415 PF00326 Prolyl oligopeptidase family AI20_15420 PF00291 Pyridoxal-phosphate dependent enzyme AI20_15425 PF00528 Binding-protein-dependent transport system inner membrane component AI20_15430 PF00528 Binding-protein-dependent transport system inner membrane component AI20_15435 PF00005 ABC transporter AI20_15440 PF00497 Bacterial extracellular solute-binding proteins, family 3 AI20_15445 PF00005 ABC transporter AI20_15445 PF02687 FtsX-like permease family AI20_15445 PF12704 MacB-like periplasmic core domain AI20_15450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AI20_15455 PF00486 Transcriptional regulatory protein, C terminal AI20_15455 PF00072 Response regulator receiver domain AI20_15460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_15460 PF00512 His Kinase A (phospho-acceptor) domain AI20_15460 PF16527 Two-component sensor protein CpxA, periplasmic domain AI20_15460 PF00672 HAMP domain AI20_15465 PF09297 NADH pyrophosphatase zinc ribbon domain AI20_15465 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AI20_15465 PF00293 NUDIX domain AI20_15495 PF03060 Nitronate monooxygenase AI20_15505 PF00445 Ribonuclease T2 family AI20_15520 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase AI20_15535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_15535 PF03466 LysR substrate binding domain AI20_15540 PF00270 DEAD/DEAH box helicase AI20_15540 PF00271 Helicase conserved C-terminal domain AI20_15550 PF02525 Flavodoxin-like fold AI20_15555 PF02627 Carboxymuconolactone decarboxylase family AI20_15570 PF01425 Amidase AI20_15575 PF04371 Porphyromonas-type peptidyl-arginine deiminase AI20_15580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_15580 PF03466 LysR substrate binding domain AI20_15585 PF04480 Protein of unknown function (DUF559) AI20_15595 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AI20_15610 PF03144 Elongation factor Tu domain 2 AI20_15610 PF16658 Class II release factor RF3, C-terminal domain AI20_15610 PF00009 Elongation factor Tu GTP binding domain AI20_15615 PF00990 Diguanylate cyclase, GGDEF domain AI20_15615 PF00072 Response regulator receiver domain AI20_15620 PF00990 Diguanylate cyclase, GGDEF domain AI20_15620 PF13426 PAS domain AI20_15620 PF00563 EAL domain AI20_15625 PF01037 Lrp/AsnC ligand binding domain AI20_15635 PF05762 VWA domain containing CoxE-like protein AI20_15640 PF12592 Protein of unknown function (DUF3763) AI20_15640 PF17868 AAA lid domain AI20_15640 PF07728 AAA domain (dynein-related subfamily) AI20_15650 PF00583 Acetyltransferase (GNAT) family AI20_15660 PF00501 AMP-binding enzyme AI20_15665 PF04262 Glutamate-cysteine ligase AI20_15670 PF00675 Insulinase (Peptidase family M16) AI20_15670 PF05193 Peptidase M16 inactive domain AI20_15675 PF09335 SNARE associated Golgi protein AI20_15680 PF08240 Alcohol dehydrogenase GroES-like domain AI20_15680 PF00107 Zinc-binding dehydrogenase AI20_15715 PF00175 Oxidoreductase NAD-binding domain AI20_15715 PF00970 Oxidoreductase FAD-binding domain AI20_15720 PF03948 Ribosomal protein L9, C-terminal domain AI20_15720 PF01281 Ribosomal protein L9, N-terminal domain AI20_15725 PF01084 Ribosomal protein S18 AI20_15730 PF01250 Ribosomal protein S6 AI20_15735 PF01566 Natural resistance-associated macrophage protein AI20_15745 PF03466 LysR substrate binding domain AI20_15745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_15760 PF07690 Major Facilitator Superfamily AI20_15780 PF00892 EamA-like transporter family AI20_15785 PF13673 Acetyltransferase (GNAT) domain AI20_15795 PF00588 SpoU rRNA Methylase family AI20_15795 PF08032 RNA 2'-O ribose methyltransferase substrate binding AI20_15820 PF08206 Ribonuclease B OB domain AI20_15820 PF00575 S1 RNA binding domain AI20_15820 PF00773 RNB domain AI20_15820 PF17876 Cold shock domain AI20_15820 PF08461 Ribonuclease R winged-helix domain AI20_15825 PF00990 Diguanylate cyclase, GGDEF domain AI20_15830 PF02664 S-Ribosylhomocysteinase (LuxS) AI20_15840 PF00543 Nitrogen regulatory protein P-II AI20_15845 PF02540 NAD synthase AI20_15845 PF00795 Carbon-nitrogen hydrolase AI20_15875 PF07963 Prokaryotic N-terminal methylation motif AI20_15875 PF00114 Pilin (bacterial filament) AI20_15880 PF05567 Neisseria PilC beta-propeller domain AI20_15905 PF02401 LytB protein AI20_15910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AI20_15915 PF01252 Signal peptidase (SPase) II AI20_15920 PF06827 Zinc finger found in FPG and IleRS AI20_15920 PF00133 tRNA synthetases class I (I, L, M and V) AI20_15920 PF08264 Anticodon-binding domain of tRNA AI20_15925 PF01687 Riboflavin kinase AI20_15925 PF06574 FAD synthetase AI20_15930 PF03023 Lipid II flippase MurJ AI20_15935 PF01649 Ribosomal protein S20 AI20_15940 PF01022 Bacterial regulatory protein, arsR family AI20_15945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_15945 PF03466 LysR substrate binding domain AI20_15955 PF06965 Na+/H+ antiporter 1 AI20_15960 PF00303 Thymidylate synthase AI20_15965 PF01790 Prolipoprotein diacylglyceryl transferase AI20_15970 PF02896 PEP-utilising enzyme, TIM barrel domain AI20_15970 PF01590 GAF domain AI20_15970 PF00391 PEP-utilising enzyme, mobile domain AI20_15970 PF05524 PEP-utilising enzyme, N-terminal AI20_15975 PF00293 NUDIX domain AI20_15980 PF02976 DNA mismatch repair enzyme MutH AI20_15990 PF01245 Ribosomal protein L19 AI20_15995 PF01746 tRNA (Guanine-1)-methyltransferase AI20_16000 PF05239 PRC-barrel domain AI20_16000 PF01782 RimM N-terminal domain AI20_16005 PF00886 Ribosomal protein S16 AI20_16010 PF00448 SRP54-type protein, GTPase domain AI20_16010 PF02978 Signal peptide binding domain AI20_16010 PF02881 SRP54-type protein, helical bundle domain AI20_16015 PF01578 Cytochrome C assembly protein AI20_16020 PF01595 Cyclin M transmembrane N-terminal domain AI20_16020 PF03471 Transporter associated domain AI20_16020 PF00571 CBS domain AI20_16025 PF02082 Transcriptional regulator AI20_16030 PF00175 Oxidoreductase NAD-binding domain AI20_16030 PF00042 Globin AI20_16030 PF00970 Oxidoreductase FAD-binding domain AI20_16035 PF08238 Sel1 repeat AI20_16040 PF00056 lactate/malate dehydrogenase, NAD binding domain AI20_16040 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AI20_16045 PF00528 Binding-protein-dependent transport system inner membrane component AI20_16050 PF00528 Binding-protein-dependent transport system inner membrane component AI20_16055 PF00497 Bacterial extracellular solute-binding proteins, family 3 AI20_16060 PF00005 ABC transporter AI20_16065 PF01316 Arginine repressor, DNA binding domain AI20_16065 PF02863 Arginine repressor, C-terminal domain AI20_16070 PF04261 Dyp-type peroxidase family AI20_16075 PF00005 ABC transporter AI20_16075 PF08402 TOBE domain AI20_16085 PF13416 Bacterial extracellular solute-binding protein AI20_16090 PF00543 Nitrogen regulatory protein P-II AI20_16095 PF00472 RF-1 domain AI20_16100 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AI20_16100 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AI20_16105 PF07670 Nucleoside recognition AI20_16105 PF07662 Na+ dependent nucleoside transporter C-terminus AI20_16105 PF01773 Na+ dependent nucleoside transporter N-terminus AI20_16110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_16110 PF03466 LysR substrate binding domain AI20_16115 PF00255 Glutathione peroxidase AI20_16125 PF02595 Glycerate kinase family AI20_16130 PF02447 GntP family permease AI20_16135 PF13556 PucR C-terminal helix-turn-helix domain AI20_16135 PF17853 GGDEF-like domain AI20_16135 PF05651 Putative sugar diacid recognition AI20_16140 PF06062 Uncharacterised protein family (UPF0231) AI20_16155 PF03372 Endonuclease/Exonuclease/phosphatase family AI20_16170 PF00271 Helicase conserved C-terminal domain AI20_16170 PF00270 DEAD/DEAH box helicase AI20_16180 PF08534 Redoxin AI20_16185 PF00403 Heavy-metal-associated domain AI20_16190 PF03714 Bacterial pullanase-associated domain AI20_16190 PF18494 Pullulanase Ins domain AI20_16190 PF17967 Pullulanase N2 domain AI20_16190 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AI20_16190 PF11852 Domain of unknown function (DUF3372) AI20_16205 PF02583 Metal-sensitive transcriptional repressor AI20_16210 PF00155 Aminotransferase class I and II AI20_16215 PF03466 LysR substrate binding domain AI20_16215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_16225 PF04055 Radical SAM superfamily AI20_16230 PF11230 Protein of unknown function (DUF3029) AI20_16250 PF07676 WD40-like Beta Propeller Repeat AI20_16250 PF03572 Peptidase family S41 AI20_16250 PF14684 Tricorn protease C1 domain AI20_16250 PF14685 Tricorn protease PDZ domain AI20_16280 PF00672 HAMP domain AI20_16280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_16280 PF17200 Single Cache domain 2 AI20_16285 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AI20_16285 PF18416 N-acetylglucosamine binding protein domain 2 AI20_16290 PF03466 LysR substrate binding domain AI20_16290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_16300 PF12857 TOBE-like domain AI20_16300 PF00005 ABC transporter AI20_16305 PF00528 Binding-protein-dependent transport system inner membrane component AI20_16310 PF00528 Binding-protein-dependent transport system inner membrane component AI20_16325 PF13194 Domain of unknown function (DUF4010) AI20_16330 PF12464 Maltose acetyltransferase AI20_16330 PF14602 Hexapeptide repeat of succinyl-transferase AI20_16355 PF14698 Argininosuccinate lyase C-terminal AI20_16355 PF00206 Lyase AI20_16360 PF00764 Arginosuccinate synthase AI20_16365 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AI20_16365 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AI20_16370 PF00696 Amino acid kinase family AI20_16375 PF02774 Semialdehyde dehydrogenase, dimerisation domain AI20_16375 PF01118 Semialdehyde dehydrogenase, NAD binding domain AI20_16380 PF07687 Peptidase dimerisation domain AI20_16380 PF01546 Peptidase family M20/M25/M40 AI20_16385 PF00311 Phosphoenolpyruvate carboxylase AI20_16405 PF01810 LysE type translocator AI20_16415 PF03447 Homoserine dehydrogenase, NAD binding domain AI20_16415 PF00696 Amino acid kinase family AI20_16415 PF00742 Homoserine dehydrogenase AI20_16420 PF01053 Cys/Met metabolism PLP-dependent enzyme AI20_16425 PF01340 Met Apo-repressor, MetJ AI20_16430 PF06445 GyrI-like small molecule binding domain AI20_16430 PF12833 Helix-turn-helix domain AI20_16435 PF01588 Putative tRNA binding domain AI20_16440 PF03222 Tryptophan/tyrosine permease family AI20_16445 PF00459 Inositol monophosphatase family AI20_16450 PF00293 NUDIX domain AI20_16455 PF13419 Haloacid dehalogenase-like hydrolase AI20_16460 PF07992 Pyridine nucleotide-disulphide oxidoreductase AI20_16460 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AI20_16465 PF03466 LysR substrate binding domain AI20_16465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_16470 PF00579 tRNA synthetases class I (W and Y) AI20_16470 PF01479 S4 domain AI20_16475 PF00196 Bacterial regulatory proteins, luxR family AI20_16480 PF01203 Type II secretion system (T2SS), protein N AI20_16485 PF04612 Type II secretion system (T2SS), protein M AI20_16490 PF05134 Type II secretion system (T2SS), protein L AI20_16490 PF12693 GspL periplasmic domain AI20_16495 PF03934 Type II secretion system (T2SS), protein K AI20_16500 PF11612 Type II secretion system (T2SS), protein J AI20_16500 PF07963 Prokaryotic N-terminal methylation motif AI20_16505 PF02501 Type II secretion system (T2SS), protein I AI20_16505 PF07963 Prokaryotic N-terminal methylation motif AI20_16510 PF07963 Prokaryotic N-terminal methylation motif AI20_16510 PF12019 Type II transport protein GspH AI20_16515 PF07963 Prokaryotic N-terminal methylation motif AI20_16515 PF08334 Type II secretion system (T2SS), protein G AI20_16520 PF00482 Type II secretion system (T2SS), protein F AI20_16525 PF00437 Type II/IV secretion system protein AI20_16530 PF03958 Bacterial type II/III secretion system short domain AI20_16530 PF00263 Bacterial type II and III secretion system protein AI20_16535 PF11356 Type II secretion system protein C AI20_16540 PF01479 S4 domain AI20_16545 PF01430 Hsp33 protein AI20_16555 PF00392 Bacterial regulatory proteins, gntR family AI20_16560 PF01321 Creatinase/Prolidase N-terminal domain AI20_16560 PF00557 Metallopeptidase family M24 AI20_16570 PF00583 Acetyltransferase (GNAT) family AI20_16575 PF05433 Glycine zipper 2TM domain AI20_16580 PF02872 5'-nucleotidase, C-terminal domain AI20_16580 PF00149 Calcineurin-like phosphoesterase AI20_16585 PF01810 LysE type translocator AI20_16590 PF03472 Autoinducer binding domain AI20_16590 PF00196 Bacterial regulatory proteins, luxR family AI20_16595 PF00765 Autoinducer synthase AI20_16600 PF03466 LysR substrate binding domain AI20_16600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_16605 PF08206 Ribonuclease B OB domain AI20_16605 PF17876 Cold shock domain AI20_16605 PF00773 RNB domain AI20_16610 PF00440 Bacterial regulatory proteins, tetR family AI20_16625 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AI20_16625 PF02378 Phosphotransferase system, EIIC AI20_16625 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AI20_16630 PF08125 Mannitol dehydrogenase C-terminal domain AI20_16630 PF01232 Mannitol dehydrogenase Rossmann domain AI20_16635 PF05068 Mannitol repressor AI20_16640 PF00999 Sodium/hydrogen exchanger family AI20_16640 PF03471 Transporter associated domain AI20_16640 PF02080 TrkA-C domain AI20_16660 PF01544 CorA-like Mg2+ transporter protein AI20_16665 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AI20_16680 PF04307 LexA-binding, inner membrane-associated putative hydrolase AI20_16685 PF01773 Na+ dependent nucleoside transporter N-terminus AI20_16685 PF07670 Nucleoside recognition AI20_16685 PF07662 Na+ dependent nucleoside transporter C-terminus AI20_16690 PF03880 DbpA RNA binding domain AI20_16690 PF00270 DEAD/DEAH box helicase AI20_16690 PF00271 Helicase conserved C-terminal domain AI20_16725 PF01040 UbiA prenyltransferase family AI20_16730 PF00425 chorismate binding enzyme AI20_16735 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AI20_16735 PF16582 Middle domain of thiamine pyrophosphate AI20_16735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AI20_16740 PF12697 Alpha/beta hydrolase family AI20_16745 PF00378 Enoyl-CoA hydratase/isomerase AI20_16750 PF13378 Enolase C-terminal domain-like AI20_16755 PF00501 AMP-binding enzyme AI20_16765 PF00419 Fimbrial protein AI20_16770 PF00419 Fimbrial protein AI20_16775 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AI20_16775 PF02753 Pili assembly chaperone PapD, C-terminal domain AI20_16780 PF13954 PapC N-terminal domain AI20_16780 PF13953 PapC C-terminal domain AI20_16780 PF00577 Outer membrane usher protein AI20_16790 PF00419 Fimbrial protein AI20_16805 PF08453 Peptidase family M9 N-terminal AI20_16805 PF01752 Collagenase AI20_16810 PF02698 DUF218 domain AI20_16815 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AI20_16815 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AI20_16825 PF00561 alpha/beta hydrolase fold AI20_16830 PF03280 Proteobacterial lipase chaperone protein AI20_16845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AI20_16845 PF12793 Sugar transport-related sRNA regulator N-term AI20_16855 PF01053 Cys/Met metabolism PLP-dependent enzyme AI20_16865 PF00465 Iron-containing alcohol dehydrogenase AI20_16875 PF03577 Peptidase family C69 AI20_16880 PF00106 short chain dehydrogenase AI20_16900 PF02308 MgtC family AI20_16905 PF00128 Alpha amylase, catalytic domain AI20_16905 PF02903 Alpha amylase, N-terminal ig-like domain AI20_16905 PF16657 Maltogenic Amylase, C-terminal domain AI20_16920 PF00884 Sulfatase AI20_16925 PF01037 Lrp/AsnC ligand binding domain AI20_16935 PF04204 Homoserine O-succinyltransferase AI20_16940 PF00013 KH domain AI20_16940 PF12072 Domain of unknown function (DUF3552) AI20_16940 PF01966 HD domain AI20_16945 PF00994 Probable molybdopterin binding domain AI20_16945 PF02464 Competence-damaged protein AI20_16955 PF00005 ABC transporter AI20_16980 PF07722 Peptidase C26 AI20_16990 PF13545 Crp-like helix-turn-helix domain AI20_16990 PF00027 Cyclic nucleotide-binding domain AI20_17000 PF13419 Haloacid dehalogenase-like hydrolase AI20_17005 PF02899 Phage integrase, N-terminal SAM-like domain AI20_17005 PF00589 Phage integrase family AI20_17015 PF01678 Diaminopimelate epimerase AI20_17020 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AI20_17020 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AI20_17025 PF01491 Frataxin-like domain AI20_17030 PF02230 Phospholipase/Carboxylesterase AI20_17035 PF12633 Adenylate cyclase NT domain AI20_17035 PF01295 Adenylate cyclase, class-I AI20_17040 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AI20_17040 PF03900 Porphobilinogen deaminase, C-terminal domain AI20_17045 PF02602 Uroporphyrinogen-III synthase HemD AI20_17050 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AI20_17060 PF03692 Putative zinc- or iron-chelating domain AI20_17065 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AI20_17080 PF07715 TonB-dependent Receptor Plug Domain AI20_17080 PF00593 TonB dependent receptor AI20_17100 PF13508 Acetyltransferase (GNAT) domain AI20_17100 PF00583 Acetyltransferase (GNAT) family AI20_17105 PF01638 HxlR-like helix-turn-helix AI20_17110 PF08803 Putative mono-oxygenase ydhR AI20_17125 PF06055 Exopolysaccharide synthesis, ExoD AI20_17135 PF17151 Periplasmic sensor domain AI20_17135 PF00990 Diguanylate cyclase, GGDEF domain AI20_17150 PF13036 Peptidoglycan-synthase activator LpoB AI20_17165 PF06968 Biotin and Thiamin Synthesis associated domain AI20_17165 PF04055 Radical SAM superfamily AI20_17170 PF05690 Thiazole biosynthesis protein ThiG AI20_17180 PF00899 ThiF family AI20_17185 PF02581 Thiamine monophosphate synthase AI20_17190 PF01964 Radical SAM ThiC family AI20_17190 PF13667 ThiC-associated domain AI20_17195 PF17425 Arylsulfotransferase Ig-like domain AI20_17195 PF05935 Arylsulfotransferase (ASST) AI20_17200 PF03440 Aerolysin/Pertussis toxin (APT) domain AI20_17200 PF01117 Aerolysin toxin AI20_17215 PF00486 Transcriptional regulatory protein, C terminal AI20_17215 PF00072 Response regulator receiver domain AI20_17225 PF08443 RimK-like ATP-grasp domain AI20_17225 PF18030 RimK PreATP-grasp domain AI20_17230 PF00809 Pterin binding enzyme AI20_17230 PF02965 Vitamin B12 dependent methionine synthase, activation domain AI20_17230 PF02607 B12 binding domain AI20_17230 PF02310 B12 binding domain AI20_17230 PF02574 Homocysteine S-methyltransferase AI20_17235 PF00999 Sodium/hydrogen exchanger family AI20_17245 PF14659 Phage integrase, N-terminal SAM-like domain AI20_17245 PF00589 Phage integrase family AI20_17245 PF13356 Arm DNA-binding domain AI20_17265 PF14338 Mrr N-terminal domain AI20_17265 PF04471 Restriction endonuclease AI20_17275 PF02384 N-6 DNA Methylase AI20_17275 PF12161 HsdM N-terminal domain AI20_17310 PF08668 HDOD domain AI20_17320 PF04228 Putative neutral zinc metallopeptidase AI20_17325 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AI20_17340 PF08447 PAS fold AI20_17340 PF13426 PAS domain AI20_17340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_17345 PF08678 Rsbr N terminal AI20_17345 PF01740 STAS domain AI20_17355 PF00072 Response regulator receiver domain AI20_17355 PF00672 HAMP domain AI20_17355 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AI20_17355 PF00512 His Kinase A (phospho-acceptor) domain AI20_17355 PF01627 Hpt domain AI20_17355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_17360 PF00072 Response regulator receiver domain AI20_17370 PF07690 Major Facilitator Superfamily AI20_17375 PF01914 MarC family integral membrane protein AI20_17385 PF01523 Putative modulator of DNA gyrase AI20_17390 PF00795 Carbon-nitrogen hydrolase AI20_17405 PF13116 Protein of unknown function AI20_17405 PF13502 AsmA-like C-terminal region AI20_17410 PF00575 S1 RNA binding domain AI20_17410 PF10150 Ribonuclease E/G family AI20_17415 PF02545 Maf-like protein AI20_17420 PF04093 rod shape-determining protein MreD AI20_17425 PF04085 rod shape-determining protein MreC AI20_17455 PF07963 Prokaryotic N-terminal methylation motif AI20_17455 PF00114 Pilin (bacterial filament) AI20_17460 PF07963 Prokaryotic N-terminal methylation motif AI20_17460 PF00114 Pilin (bacterial filament) AI20_17475 PF00482 Type II secretion system (T2SS), protein F AI20_17480 PF00437 Type II/IV secretion system protein AI20_17480 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AI20_17495 PF03958 Bacterial type II/III secretion system short domain AI20_17495 PF00263 Bacterial type II and III secretion system protein AI20_17530 PF17157 Gammaproteobacterial periplasmic sensor domain AI20_17530 PF00990 Diguanylate cyclase, GGDEF domain AI20_17530 PF00563 EAL domain AI20_17535 PF00563 EAL domain AI20_17535 PF12792 CSS motif domain associated with EAL AI20_17540 PF01699 Sodium/calcium exchanger protein AI20_17545 PF00221 Aromatic amino acid lyase AI20_17550 PF17391 Urocanase N-terminal domain AI20_17550 PF17392 Urocanase C-terminal domain AI20_17550 PF01175 Urocanase Rossmann-like domain AI20_17555 PF00491 Arginase family AI20_17560 PF01979 Amidohydrolase family AI20_17565 PF07702 UTRA domain AI20_17565 PF00392 Bacterial regulatory proteins, gntR family AI20_17570 PF00484 Carbonic anhydrase AI20_17575 PF04545 Sigma-70, region 4 AI20_17575 PF04542 Sigma-70 region 2 AI20_17575 PF00140 Sigma-70 factor, region 1.2 AI20_17580 PF18075 FtsX extracellular domain AI20_17585 PF00005 ABC transporter AI20_17590 PF00448 SRP54-type protein, GTPase domain AI20_17590 PF02881 SRP54-type protein, helical bundle domain AI20_17610 PF00440 Bacterial regulatory proteins, tetR family AI20_17620 PF13091 PLD-like domain AI20_17630 PF01464 Transglycosylase SLT domain AI20_17645 PF02416 mttA/Hcf106 family AI20_17650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_17650 PF03466 LysR substrate binding domain AI20_17655 PF01914 MarC family integral membrane protein AI20_17660 PF10678 Protein of unknown function (DUF2492) AI20_17670 PF00375 Sodium:dicarboxylate symporter family AI20_17680 PF03466 LysR substrate binding domain AI20_17680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_17685 PF13533 Biotin-lipoyl like AI20_17690 PF07690 Major Facilitator Superfamily AI20_17695 PF07947 YhhN family AI20_17715 PF16868 NMT1-like family AI20_17720 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AI20_17720 PF00326 Prolyl oligopeptidase family AI20_17735 PF00106 short chain dehydrogenase AI20_17740 PF03466 LysR substrate binding domain AI20_17740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_17745 PF02525 Flavodoxin-like fold AI20_17750 PF00999 Sodium/hydrogen exchanger family AI20_17750 PF02254 TrkA-N domain AI20_17800 PF00163 Ribosomal protein S4/S9 N-terminal domain AI20_17800 PF01479 S4 domain AI20_17805 PF00411 Ribosomal protein S11 AI20_17810 PF00416 Ribosomal protein S13/S18 AI20_17815 PF00344 SecY translocase AI20_17820 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AI20_17830 PF00333 Ribosomal protein S5, N-terminal domain AI20_17830 PF03719 Ribosomal protein S5, C-terminal domain AI20_17835 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AI20_17840 PF00347 Ribosomal protein L6 AI20_17845 PF00410 Ribosomal protein S8 AI20_17850 PF00253 Ribosomal protein S14p/S29e AI20_17855 PF00673 ribosomal L5P family C-terminus AI20_17855 PF00281 Ribosomal protein L5 AI20_17860 PF00467 KOW motif AI20_17860 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AI20_17865 PF00238 Ribosomal protein L14p/L23e AI20_17870 PF00366 Ribosomal protein S17 AI20_17875 PF00831 Ribosomal L29 protein AI20_17880 PF00252 Ribosomal protein L16p/L10e AI20_17885 PF00189 Ribosomal protein S3, C-terminal domain AI20_17885 PF07650 KH domain AI20_17890 PF00237 Ribosomal protein L22p/L17e AI20_17895 PF00203 Ribosomal protein S19 AI20_17900 PF03947 Ribosomal Proteins L2, C-terminal domain AI20_17900 PF00181 Ribosomal Proteins L2, RNA binding domain AI20_17905 PF00276 Ribosomal protein L23 AI20_17910 PF00573 Ribosomal protein L4/L1 family AI20_17915 PF00297 Ribosomal protein L3 AI20_17920 PF00338 Ribosomal protein S10p/S20e AI20_17930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_17930 PF00512 His Kinase A (phospho-acceptor) domain AI20_17930 PF00672 HAMP domain AI20_17935 PF00072 Response regulator receiver domain AI20_17935 PF00486 Transcriptional regulatory protein, C terminal AI20_17940 PF01272 Transcription elongation factor, GreA/GreB, C-term AI20_17940 PF03449 Transcription elongation factor, N-terminal AI20_17945 PF16921 Tex protein YqgF-like domain AI20_17945 PF17674 HHH domain AI20_17945 PF09371 Tex-like protein N-terminal domain AI20_17945 PF00575 S1 RNA binding domain AI20_17965 PF00561 alpha/beta hydrolase fold AI20_17970 PF00156 Phosphoribosyl transferase domain AI20_17975 PF01106 NifU-like domain AI20_17975 PF01521 Iron-sulphur cluster biosynthesis AI20_17980 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AI20_17980 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AI20_17985 PF02556 Preprotein translocase subunit SecB AI20_17990 PF00581 Rhodanese-like domain AI20_17995 PF01676 Metalloenzyme superfamily AI20_17995 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AI20_18000 PF01551 Peptidase family M23 AI20_18010 PF00356 Bacterial regulatory proteins, lacI family AI20_18010 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AI20_18015 PF01081 KDPG and KHG aldolase AI20_18020 PF00920 Dehydratase family AI20_18025 PF01202 Shikimate kinase AI20_18030 PF02447 GntP family permease AI20_18035 PF13091 PLD-like domain AI20_18040 PF00270 DEAD/DEAH box helicase AI20_18040 PF17191 RecG wedge domain AI20_18040 PF00271 Helicase conserved C-terminal domain AI20_18050 PF09500 Putative thioesterase (yiiD_Cterm) AI20_18050 PF00583 Acetyltransferase (GNAT) family AI20_18070 PF02580 D-Tyr-tRNA(Tyr) deacylase AI20_18075 PF03631 Virulence factor BrkB AI20_18085 PF03951 Glutamine synthetase, beta-Grasp domain AI20_18085 PF00120 Glutamine synthetase, catalytic domain AI20_18095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_18095 PF00989 PAS fold AI20_18095 PF00512 His Kinase A (phospho-acceptor) domain AI20_18100 PF00158 Sigma-54 interaction domain AI20_18100 PF00072 Response regulator receiver domain AI20_18100 PF02954 Bacterial regulatory protein, Fis family AI20_18105 PF00962 Adenosine/AMP deaminase AI20_18110 PF04055 Radical SAM superfamily AI20_18110 PF06969 HemN C-terminal domain AI20_18115 PF10675 Protein of unknown function (DUF2489) AI20_18120 PF04220 Der GTPase activator (YihI) AI20_18130 PF00034 Cytochrome c AI20_18135 PF01926 50S ribosome-binding GTPase AI20_18140 PF07369 Protein of unknown function (DUF1488) AI20_18145 PF08501 Shikimate dehydrogenase substrate binding domain AI20_18145 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AI20_18145 PF01488 Shikimate / quinate 5-dehydrogenase AI20_18155 PF01300 Telomere recombination AI20_18160 PF00731 AIR carboxylase AI20_18165 PF01396 Topoisomerase DNA binding C4 zinc finger AI20_18170 PF04361 Protein of unknown function (DUF494) AI20_18175 PF02481 DNA recombination-mediator protein A AI20_18175 PF17782 DprA winged helix domain AI20_18185 PF01327 Polypeptide deformylase AI20_18190 PF02911 Formyl transferase, C-terminal domain AI20_18190 PF00551 Formyl transferase AI20_18195 PF01029 NusB family AI20_18195 PF01189 16S rRNA methyltransferase RsmB/F AI20_18200 PF02080 TrkA-C domain AI20_18200 PF02254 TrkA-N domain AI20_18205 PF02386 Cation transport protein AI20_18210 PF02646 RmuC family AI20_18225 PF02082 Transcriptional regulator AI20_18230 PF00294 pfkB family carbohydrate kinase AI20_18235 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AI20_18235 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AI20_18240 PF00117 Glutamine amidotransferase class-I AI20_18240 PF00958 GMP synthase C terminal domain AI20_18240 PF02540 NAD synthase AI20_18245 PF00171 Aldehyde dehydrogenase family AI20_18250 PF00202 Aminotransferase class-III AI20_18255 PF01381 Helix-turn-helix AI20_18255 PF07883 Cupin domain AI20_18260 PF00171 Aldehyde dehydrogenase family AI20_18270 PF00892 EamA-like transporter family AI20_18275 PF12833 Helix-turn-helix domain AI20_18280 PF01810 LysE type translocator AI20_18285 PF00690 Cation transporter/ATPase, N-terminus AI20_18285 PF00689 Cation transporting ATPase, C-terminus AI20_18290 PF04143 Sulphur transport AI20_18300 PF01810 LysE type translocator AI20_18310 PF06206 CpeT/CpcT family (DUF1001) AI20_18345 PF14001 YdfZ protein AI20_18365 PF03466 LysR substrate binding domain AI20_18365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_18395 PF13361 UvrD-like helicase C-terminal domain AI20_18395 PF00580 UvrD/REP helicase N-terminal domain AI20_18425 PF03466 LysR substrate binding domain AI20_18425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_18430 PF00107 Zinc-binding dehydrogenase AI20_18430 PF08240 Alcohol dehydrogenase GroES-like domain AI20_18435 PF00756 Putative esterase AI20_18445 PF03781 Sulfatase-modifying factor enzyme 1 AI20_18445 PF12867 DinB superfamily AI20_18450 PF13593 SBF-like CPA transporter family (DUF4137) AI20_18455 PF13520 Amino acid permease AI20_18460 PF01588 Putative tRNA binding domain AI20_18465 PF13520 Amino acid permease AI20_18470 PF04074 YhcH/YjgK/YiaL AI20_18475 PF02929 Beta galactosidase small chain AI20_18475 PF16353 Domain of unknown function(DUF4981) AI20_18475 PF00703 Glycosyl hydrolases family 2 AI20_18475 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AI20_18475 PF02837 Glycosyl hydrolases family 2, sugar binding domain AI20_18480 PF00356 Bacterial regulatory proteins, lacI family AI20_18520 PF00132 Bacterial transferase hexapeptide (six repeats) AI20_18525 PF01612 3'-5' exonuclease AI20_18525 PF01367 5'-3' exonuclease, C-terminal SAM fold AI20_18525 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AI20_18525 PF00476 DNA polymerase family A AI20_18535 PF06005 Cell division protein ZapB AI20_18545 PF06426 Serine acetyltransferase, N-terminal AI20_18545 PF00132 Bacterial transferase hexapeptide (six repeats) AI20_18550 PF16916 Dimerisation domain of Zinc Transporter AI20_18550 PF01545 Cation efflux family AI20_18555 PF00072 Response regulator receiver domain AI20_18555 PF00486 Transcriptional regulatory protein, C terminal AI20_18560 PF00672 HAMP domain AI20_18560 PF16527 Two-component sensor protein CpxA, periplasmic domain AI20_18560 PF00512 His Kinase A (phospho-acceptor) domain AI20_18560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_18565 PF00588 SpoU rRNA Methylase family AI20_18570 PF01554 MatE AI20_18575 PF02630 SCO1/SenC AI20_18590 PF01726 LexA DNA binding domain AI20_18590 PF00717 Peptidase S24-like AI20_18595 PF01553 Acyltransferase AI20_18600 PF01040 UbiA prenyltransferase family AI20_18605 PF04345 Chorismate lyase AI20_18610 PF03748 Flagellar basal body-associated protein FliL AI20_18630 PF08240 Alcohol dehydrogenase GroES-like domain AI20_18630 PF00107 Zinc-binding dehydrogenase AI20_18635 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AI20_18635 PF00356 Bacterial regulatory proteins, lacI family AI20_18640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AI20_18650 PF03611 PTS system sugar-specific permease component AI20_18655 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AI20_18660 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AI20_18665 PF00535 Glycosyl transferase family 2 AI20_18670 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AI20_18675 PF01467 Cytidylyltransferase-like AI20_18680 PF04393 Protein of unknown function (DUF535) AI20_18685 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AI20_18685 PF06827 Zinc finger found in FPG and IleRS AI20_18685 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AI20_18695 PF00471 Ribosomal protein L33 AI20_18705 PF04002 RadC-like JAB domain AI20_18710 PF02441 Flavoprotein AI20_18710 PF04127 DNA / pantothenate metabolism flavoprotein AI20_18715 PF00692 dUTPase AI20_18720 PF00440 Bacterial regulatory proteins, tetR family AI20_18725 PF00924 Mechanosensitive ion channel AI20_18725 PF05552 Conserved TM helix AI20_18735 PF00342 Phosphoglucose isomerase AI20_18740 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AI20_18740 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AI20_18745 PF03466 LysR substrate binding domain AI20_18745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_18760 PF13380 CoA binding domain AI20_18760 PF00583 Acetyltransferase (GNAT) family AI20_18760 PF13607 Succinyl-CoA ligase like flavodoxin domain AI20_18785 PF12724 Flavodoxin domain AI20_18790 PF02386 Cation transport protein AI20_18795 PF01205 Uncharacterized protein family UPF0029 AI20_18795 PF09186 Domain of unknown function (DUF1949) AI20_18800 PF00557 Metallopeptidase family M24 AI20_18805 PF00501 AMP-binding enzyme AI20_18805 PF13193 AMP-binding enzyme C-terminal domain AI20_18810 PF00378 Enoyl-CoA hydratase/isomerase AI20_18810 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AI20_18810 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AI20_18815 PF02803 Thiolase, C-terminal domain AI20_18815 PF00108 Thiolase, N-terminal domain AI20_18820 PF00486 Transcriptional regulatory protein, C terminal AI20_18820 PF00072 Response regulator receiver domain AI20_18825 PF00672 HAMP domain AI20_18825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_18825 PF00512 His Kinase A (phospho-acceptor) domain AI20_18830 PF01547 Bacterial extracellular solute-binding protein AI20_18840 PF01206 Sulfurtransferase TusA AI20_18845 PF01042 Endoribonuclease L-PSP AI20_18855 PF00691 OmpA family AI20_18855 PF13488 Glycine zipper AI20_18860 PF00857 Isochorismatase family AI20_18865 PF03352 Methyladenine glycosylase AI20_18870 PF02091 Glycyl-tRNA synthetase alpha subunit AI20_18875 PF02092 Glycyl-tRNA synthetase beta subunit AI20_18875 PF05746 DALR anticodon binding domain AI20_18880 PF01202 Shikimate kinase AI20_18910 PF03222 Tryptophan/tyrosine permease family AI20_18915 PF12801 4Fe-4S binding domain AI20_18925 PF07992 Pyridine nucleotide-disulphide oxidoreductase AI20_18925 PF18113 Rubredoxin binding C-terminal domain AI20_18930 PF00301 Rubredoxin AI20_18930 PF00753 Metallo-beta-lactamase superfamily AI20_18930 PF00258 Flavodoxin AI20_18935 PF00158 Sigma-54 interaction domain AI20_18935 PF01590 GAF domain AI20_18940 PF00392 Bacterial regulatory proteins, gntR family AI20_18940 PF07702 UTRA domain AI20_18945 PF00367 phosphotransferase system, EIIB AI20_18945 PF02378 Phosphotransferase system, EIIC AI20_18950 PF11975 Family 4 glycosyl hydrolase C-terminal domain AI20_18950 PF02056 Family 4 glycosyl hydrolase AI20_18955 PF00356 Bacterial regulatory proteins, lacI family AI20_18960 PF13458 Periplasmic binding protein AI20_18965 PF02653 Branched-chain amino acid transport system / permease component AI20_18970 PF11862 Domain of unknown function (DUF3382) AI20_18970 PF02653 Branched-chain amino acid transport system / permease component AI20_18980 PF00005 ABC transporter AI20_18980 PF12399 Branched-chain amino acid ATP-binding cassette transporter AI20_18985 PF00005 ABC transporter AI20_19000 PF00581 Rhodanese-like domain AI20_19005 PF01694 Rhomboid family AI20_19005 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AI20_19010 PF12262 Bacterial virulence factor lipase N-terminal AI20_19015 PF04380 Membrane fusogenic activity AI20_19020 PF00175 Oxidoreductase NAD-binding domain AI20_19025 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AI20_19035 PF07498 Rho termination factor, N-terminal domain AI20_19035 PF07497 Rho termination factor, RNA-binding domain AI20_19035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AI20_19040 PF00085 Thioredoxin AI20_19045 PF00271 Helicase conserved C-terminal domain AI20_19045 PF00270 DEAD/DEAH box helicase AI20_19050 PF02541 Ppx/GppA phosphatase family AI20_19065 PF04445 Putative SAM-dependent methyltransferase AI20_19070 PF00497 Bacterial extracellular solute-binding proteins, family 3 AI20_19075 PF03707 Bacterial signalling protein N terminal repeat AI20_19075 PF00563 EAL domain AI20_19075 PF00990 Diguanylate cyclase, GGDEF domain AI20_19080 PF01432 Peptidase family M3 AI20_19085 PF00490 Delta-aminolevulinic acid dehydratase AI20_19090 PF01026 TatD related DNase AI20_19095 PF00902 Sec-independent protein translocase protein (TatC) AI20_19100 PF02416 mttA/Hcf106 family AI20_19105 PF02416 mttA/Hcf106 family AI20_19110 PF03109 ABC1 family AI20_19115 PF02036 SCP-2 sterol transfer family AI20_19120 PF01209 ubiE/COQ5 methyltransferase family AI20_19125 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AI20_19130 PF07969 Amidohydrolase family AI20_19170 PF03544 Gram-negative bacterial TonB protein C-terminal AI20_19175 PF02472 Biopolymer transport protein ExbD/TolR AI20_19180 PF01618 MotA/TolQ/ExbB proton channel family AI20_19185 PF01618 MotA/TolQ/ExbB proton channel family AI20_19195 PF03472 Autoinducer binding domain AI20_19195 PF00196 Bacterial regulatory proteins, luxR family AI20_19200 PF01380 SIS domain AI20_19205 PF08220 DeoR-like helix-turn-helix domain AI20_19205 PF00455 DeoR C terminal sensor domain AI20_19210 PF00072 Response regulator receiver domain AI20_19210 PF00486 Transcriptional regulatory protein, C terminal AI20_19215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_19215 PF00672 HAMP domain AI20_19215 PF00512 His Kinase A (phospho-acceptor) domain AI20_19220 PF00905 Penicillin binding protein transpeptidase domain AI20_19225 PF06123 Inner membrane protein CreD AI20_19230 PF14602 Hexapeptide repeat of succinyl-transferase AI20_19230 PF12804 MobA-like NTP transferase domain AI20_19230 PF00132 Bacterial transferase hexapeptide (six repeats) AI20_19235 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AI20_19235 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AI20_19240 PF02874 ATP synthase alpha/beta family, beta-barrel domain AI20_19240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AI20_19245 PF00231 ATP synthase AI20_19250 PF00306 ATP synthase alpha/beta chain, C terminal domain AI20_19250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AI20_19250 PF02874 ATP synthase alpha/beta family, beta-barrel domain AI20_19255 PF00213 ATP synthase delta (OSCP) subunit AI20_19260 PF00430 ATP synthase B/B' CF(0) AI20_19265 PF00137 ATP synthase subunit C AI20_19270 PF00119 ATP synthase A chain AI20_19280 PF02195 ParB-like nuclease domain AI20_19280 PF17762 HTH domain found in ParB protein AI20_19285 PF13614 AAA domain AI20_19290 PF02527 rRNA small subunit methyltransferase G AI20_19295 PF01134 Glucose inhibited division protein A AI20_19295 PF13932 GidA associated domain AI20_19300 PF00258 Flavodoxin AI20_19305 PF07715 TonB-dependent Receptor Plug Domain AI20_19305 PF00593 TonB dependent receptor AI20_19310 PF00005 ABC transporter AI20_19315 PF00005 ABC transporter AI20_19325 PF01032 FecCD transport family AI20_19330 PF10396 GTP-binding protein TrmE N-terminus AI20_19330 PF12631 MnmE helical domain AI20_19330 PF01926 50S ribosome-binding GTPase AI20_19335 PF14849 YidC periplasmic domain AI20_19335 PF02096 60Kd inner membrane protein AI20_19340 PF00825 Ribonuclease P AI20_19350 PF00005 ABC transporter AI20_19355 PF00528 Binding-protein-dependent transport system inner membrane component AI20_19360 PF00497 Bacterial extracellular solute-binding proteins, family 3 AI20_19365 PF08299 Bacterial dnaA protein helix-turn-helix AI20_19365 PF11638 DnaA N-terminal domain AI20_19365 PF00308 Bacterial dnaA protein AI20_19370 PF02768 DNA polymerase III beta subunit, C-terminal domain AI20_19370 PF02767 DNA polymerase III beta subunit, central domain AI20_19370 PF00712 DNA polymerase III beta subunit, N-terminal domain AI20_19375 PF02463 RecF/RecN/SMC N terminal domain AI20_19380 PF00986 DNA gyrase B subunit, carboxyl terminus AI20_19380 PF01751 Toprim domain AI20_19380 PF18053 DNA gyrase B subunit insert domain AI20_19380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_19380 PF00204 DNA gyrase B AI20_19390 PF13280 WYL domain AI20_19390 PF08279 HTH domain AI20_19395 PF00011 Hsp20/alpha crystallin family AI20_19400 PF00011 Hsp20/alpha crystallin family AI20_19405 PF00155 Aminotransferase class I and II AI20_19420 PF07690 Major Facilitator Superfamily AI20_19425 PF00486 Transcriptional regulatory protein, C terminal AI20_19425 PF00072 Response regulator receiver domain AI20_19430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_19430 PF02702 Osmosensitive K+ channel His kinase sensor domain AI20_19430 PF00512 His Kinase A (phospho-acceptor) domain AI20_19430 PF13492 GAF domain AI20_19430 PF13493 Domain of unknown function (DUF4118) AI20_19435 PF02669 K+-transporting ATPase, c chain AI20_19450 PF03814 Potassium-transporting ATPase A subunit AI20_19455 PF07992 Pyridine nucleotide-disulphide oxidoreductase AI20_19455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AI20_19460 PF00497 Bacterial extracellular solute-binding proteins, family 3 AI20_19460 PF00512 His Kinase A (phospho-acceptor) domain AI20_19460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_19465 PF00873 AcrB/AcrD/AcrF family AI20_19470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AI20_19475 PF00440 Bacterial regulatory proteins, tetR family AI20_19510 PF07690 Major Facilitator Superfamily AI20_19520 PF00672 HAMP domain AI20_19520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_19520 PF00512 His Kinase A (phospho-acceptor) domain AI20_19525 PF00072 Response regulator receiver domain AI20_19525 PF02954 Bacterial regulatory protein, Fis family AI20_19525 PF14532 Sigma-54 interaction domain AI20_19535 PF12146 Serine aminopeptidase, S33 AI20_19540 PF00132 Bacterial transferase hexapeptide (six repeats) AI20_19545 PF12105 SpoU, rRNA methylase, C-terminal AI20_19545 PF00588 SpoU rRNA Methylase family AI20_19550 PF13291 ACT domain AI20_19550 PF02824 TGS domain AI20_19550 PF04607 Region found in RelA / SpoT proteins AI20_19555 PF01192 RNA polymerase Rpb6 AI20_19560 PF00625 Guanylate kinase AI20_19565 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AI20_19580 PF00892 EamA-like transporter family AI20_19600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_19600 PF03466 LysR substrate binding domain AI20_19605 PF00579 tRNA synthetases class I (W and Y) AI20_19610 PF00582 Universal stress protein family AI20_19615 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AI20_19615 PF12241 Trans-2-enoyl-CoA reductase catalytic region AI20_19615 PF07055 Enoyl reductase FAD binding domain AI20_19620 PF00990 Diguanylate cyclase, GGDEF domain AI20_19625 PF00210 Ferritin-like domain AI20_19635 PF07690 Major Facilitator Superfamily AI20_19640 PF01810 LysE type translocator AI20_19655 PF16967 E-set like domain AI20_19655 PF15976 CS1-pili formation C-terminal AI20_19660 PF18649 EcpB C-terminal domain AI20_19665 PF16449 Fimbrillin MatB AI20_19670 PF00196 Bacterial regulatory proteins, luxR family AI20_19670 PF00072 Response regulator receiver domain AI20_19675 PF01627 Hpt domain AI20_19675 PF00989 PAS fold AI20_19675 PF00072 Response regulator receiver domain AI20_19675 PF00512 His Kinase A (phospho-acceptor) domain AI20_19675 PF00497 Bacterial extracellular solute-binding proteins, family 3 AI20_19675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_19685 PF06580 Histidine kinase AI20_19685 PF07694 5TMR of 5TMR-LYT AI20_19685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_19690 PF00072 Response regulator receiver domain AI20_19690 PF04397 LytTr DNA-binding domain AI20_19695 PF07690 Major Facilitator Superfamily AI20_19700 PF02222 ATP-grasp domain AI20_19700 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AI20_19705 PF00731 AIR carboxylase AI20_19720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_19720 PF03466 LysR substrate binding domain AI20_19725 PF07715 TonB-dependent Receptor Plug Domain AI20_19725 PF00593 TonB dependent receptor AI20_19730 PF01177 Asp/Glu/Hydantoin racemase AI20_19770 PF00899 ThiF family AI20_19775 PF02657 Fe-S metabolism associated domain AI20_19780 PF00266 Aminotransferase class-V AI20_19785 PF00580 UvrD/REP helicase N-terminal domain AI20_19785 PF13361 UvrD-like helicase C-terminal domain AI20_19790 PF00563 EAL domain AI20_19790 PF00990 Diguanylate cyclase, GGDEF domain AI20_19790 PF03707 Bacterial signalling protein N terminal repeat AI20_19790 PF13188 PAS domain AI20_19795 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AI20_19800 PF00107 Zinc-binding dehydrogenase AI20_19800 PF08240 Alcohol dehydrogenase GroES-like domain AI20_19805 PF00155 Aminotransferase class I and II AI20_19810 PF00440 Bacterial regulatory proteins, tetR family AI20_19810 PF08360 QacR-like protein, C-terminal region AI20_19815 PF01370 NAD dependent epimerase/dehydratase family AI20_19830 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) AI20_19850 PF07715 TonB-dependent Receptor Plug Domain AI20_19850 PF00593 TonB dependent receptor AI20_19855 PF01497 Periplasmic binding protein AI20_19860 PF00005 ABC transporter AI20_19865 PF01032 FecCD transport family AI20_19870 PF01032 FecCD transport family AI20_19875 PF00005 ABC transporter AI20_19880 PF00005 ABC transporter AI20_19880 PF04954 Siderophore-interacting protein AI20_19880 PF08021 Siderophore-interacting FAD-binding domain AI20_19880 PF00664 ABC transporter transmembrane region AI20_19895 PF00501 AMP-binding enzyme AI20_19895 PF00550 Phosphopantetheine attachment site AI20_19895 PF00975 Thioesterase domain AI20_19895 PF00668 Condensation domain AI20_19895 PF13193 AMP-binding enzyme C-terminal domain AI20_19900 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AI20_19905 PF00501 AMP-binding enzyme AI20_19905 PF00550 Phosphopantetheine attachment site AI20_19905 PF08242 Methyltransferase domain AI20_19905 PF00668 Condensation domain AI20_19915 PF00282 Pyridoxal-dependent decarboxylase conserved domain AI20_19920 PF03755 YicC-like family, N-terminal region AI20_19920 PF08340 Domain of unknown function (DUF1732) AI20_19925 PF01138 3' exoribonuclease family, domain 1 AI20_19925 PF03725 3' exoribonuclease family, domain 2 AI20_19930 PF00156 Phosphoribosyl transferase domain AI20_19935 PF00403 Heavy-metal-associated domain AI20_19940 PF00376 MerR family regulatory protein AI20_19940 PF09278 MerR, DNA binding AI20_19945 PF01590 GAF domain AI20_19945 PF00563 EAL domain AI20_19945 PF00990 Diguanylate cyclase, GGDEF domain AI20_19945 PF00360 Phytochrome region AI20_19950 PF06288 Protein of unknown function (DUF1040) AI20_19955 PF12801 4Fe-4S binding domain AI20_19955 PF13746 4Fe-4S dicluster domain AI20_19955 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AI20_19960 PF01636 Phosphotransferase enzyme family AI20_19965 PF01323 DSBA-like thioredoxin domain AI20_19970 PF00528 Binding-protein-dependent transport system inner membrane component AI20_19975 PF00005 ABC transporter AI20_19985 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AI20_19985 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AI20_19990 PF00857 Isochorismatase family AI20_20000 PF04463 Protein of unknown function (DUF523) AI20_20005 PF01553 Acyltransferase AI20_20010 PF01553 Acyltransferase AI20_20015 PF01078 Magnesium chelatase, subunit ChlI AI20_20015 PF13335 Magnesium chelatase, subunit ChlI C-terminal AI20_20020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AI20_20020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AI20_20020 PF00205 Thiamine pyrophosphate enzyme, central domain AI20_20030 PF01063 Amino-transferase class IV AI20_20035 PF00920 Dehydratase family AI20_20040 PF00291 Pyridoxal-phosphate dependent enzyme AI20_20040 PF00585 C-terminal regulatory domain of Threonine dehydratase AI20_20045 PF00691 OmpA family AI20_20045 PF01389 OmpA-like transmembrane domain AI20_20055 PF00440 Bacterial regulatory proteins, tetR family AI20_20065 PF00270 DEAD/DEAH box helicase AI20_20065 PF00271 Helicase conserved C-terminal domain AI20_20065 PF17764 3′ DNA-binding domain (3′BD) AI20_20065 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AI20_20065 PF18074 Primosomal protein N C-terminal domain AI20_20070 PF01197 Ribosomal protein L31 AI20_20075 PF13460 NAD(P)H-binding AI20_20075 PF11066 Protein of unknown function (DUF2867) AI20_20080 PF00390 Malic enzyme, N-terminal domain AI20_20080 PF03949 Malic enzyme, NAD binding domain AI20_20090 PF00512 His Kinase A (phospho-acceptor) domain AI20_20090 PF00672 HAMP domain AI20_20090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_20095 PF00072 Response regulator receiver domain AI20_20095 PF00486 Transcriptional regulatory protein, C terminal AI20_20100 PF05958 tRNA (Uracil-5-)-methyltransferase AI20_20135 PF16221 winged helix-turn-helix AI20_20135 PF09940 Domain of unknown function (DUF2172) AI20_20135 PF16254 Domain of unknown function (DUF4910) AI20_20155 PF03102 NeuB family AI20_20155 PF08666 SAF domain AI20_20165 PF02348 Cytidylyltransferase AI20_20185 PF13193 AMP-binding enzyme C-terminal domain AI20_20185 PF00501 AMP-binding enzyme AI20_20200 PF00535 Glycosyl transferase family 2 AI20_20205 PF03275 UDP-galactopyranose mutase AI20_20260 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AI20_20270 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AI20_20275 PF02719 Polysaccharide biosynthesis protein AI20_20280 PF00128 Alpha amylase, catalytic domain AI20_20280 PF02903 Alpha amylase, N-terminal ig-like domain AI20_20290 PF03724 META domain AI20_20295 PF00012 Hsp70 protein AI20_20300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AI20_20300 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AI20_20305 PF05981 CreA protein AI20_20320 PF01258 Prokaryotic dksA/traR C4-type zinc finger AI20_20325 PF00120 Glutamine synthetase, catalytic domain AI20_20330 PF00202 Aminotransferase class-III AI20_20335 PF13416 Bacterial extracellular solute-binding protein AI20_20340 PF13416 Bacterial extracellular solute-binding protein AI20_20345 PF08402 TOBE domain AI20_20345 PF00005 ABC transporter AI20_20350 PF00528 Binding-protein-dependent transport system inner membrane component AI20_20355 PF00528 Binding-protein-dependent transport system inner membrane component AI20_20360 PF03475 3-alpha domain AI20_20360 PF03473 MOSC domain AI20_20375 PF03061 Thioesterase superfamily AI20_20380 PF09382 RQC domain AI20_20380 PF00270 DEAD/DEAH box helicase AI20_20380 PF16124 RecQ zinc-binding AI20_20380 PF00570 HRDC domain AI20_20380 PF00271 Helicase conserved C-terminal domain AI20_20390 PF00034 Cytochrome c AI20_20395 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AI20_20405 PF02592 Putative vitamin uptake transporter AI20_20410 PF03737 Aldolase/RraA AI20_20415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_20415 PF00672 HAMP domain AI20_20420 PF03448 MgtE intracellular N domain AI20_20420 PF01769 Divalent cation transporter AI20_20420 PF00571 CBS domain AI20_20425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AI20_20425 PF14824 Sirohaem biosynthesis protein central AI20_20425 PF10414 Sirohaem synthase dimerisation region AI20_20430 PF01226 Formate/nitrite transporter AI20_20435 PF13806 Rieske-like [2Fe-2S] domain AI20_20440 PF04324 BFD-like [2Fe-2S] binding domain AI20_20440 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AI20_20440 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AI20_20440 PF18267 Rubredoxin NAD+ reductase C-terminal domain AI20_20440 PF07992 Pyridine nucleotide-disulphide oxidoreductase AI20_20445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_20445 PF03466 LysR substrate binding domain AI20_20450 PF07690 Major Facilitator Superfamily AI20_20455 PF07724 AAA domain (Cdc48 subfamily) AI20_20455 PF10431 C-terminal, D2-small domain, of ClpB protein AI20_20455 PF00004 ATPase family associated with various cellular activities (AAA) AI20_20460 PF00227 Proteasome subunit AI20_20470 PF03485 Arginyl tRNA synthetase N terminal domain AI20_20470 PF05746 DALR anticodon binding domain AI20_20470 PF00750 tRNA synthetases class I (R) AI20_20480 PF04542 Sigma-70 region 2 AI20_20480 PF04545 Sigma-70, region 4 AI20_20485 PF12973 ChrR Cupin-like domain AI20_20490 PF02673 Bacitracin resistance protein BacA AI20_20495 PF00248 Aldo/keto reductase family AI20_20500 PF01263 Aldose 1-epimerase AI20_20505 PF00288 GHMP kinases N terminal domain AI20_20505 PF08544 GHMP kinases C terminal AI20_20505 PF10509 Galactokinase galactose-binding signature AI20_20510 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AI20_20510 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AI20_20515 PF16363 GDP-mannose 4,6 dehydratase AI20_20520 PF00356 Bacterial regulatory proteins, lacI family AI20_20525 PF02929 Beta galactosidase small chain AI20_20525 PF16353 Domain of unknown function(DUF4981) AI20_20525 PF00703 Glycosyl hydrolases family 2 AI20_20525 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AI20_20525 PF02837 Glycosyl hydrolases family 2, sugar binding domain AI20_20530 PF13407 Periplasmic binding protein domain AI20_20535 PF00005 ABC transporter AI20_20540 PF02653 Branched-chain amino acid transport system / permease component AI20_20545 PF02743 Cache domain AI20_20545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_20545 PF00672 HAMP domain AI20_20570 PF00696 Amino acid kinase family AI20_20575 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AI20_20575 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AI20_20580 PF03606 C4-dicarboxylate anaerobic carrier AI20_20585 PF02863 Arginine repressor, C-terminal domain AI20_20585 PF01316 Arginine repressor, DNA binding domain AI20_20590 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AI20_20590 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AI20_20595 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AI20_20595 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AI20_20610 PF02666 Phosphatidylserine decarboxylase AI20_20620 PF02743 Cache domain AI20_20620 PF00672 HAMP domain AI20_20620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_20625 PF08212 Lipocalin-like domain AI20_20630 PF06719 AraC-type transcriptional regulator N-terminus AI20_20630 PF12833 Helix-turn-helix domain AI20_20635 PF00465 Iron-containing alcohol dehydrogenase AI20_20640 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AI20_20640 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AI20_20640 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AI20_20645 PF02233 NAD(P) transhydrogenase beta subunit AI20_20650 PF08348 YheO-like PAS domain AI20_20650 PF13309 HTH domain AI20_20655 PF03313 Serine dehydratase alpha chain AI20_20660 PF00375 Sodium:dicarboxylate symporter family AI20_20665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AI20_20665 PF07992 Pyridine nucleotide-disulphide oxidoreductase AI20_20670 PF13525 Outer membrane lipoprotein AI20_20675 PF00849 RNA pseudouridylate synthase AI20_20675 PF01479 S4 domain AI20_20685 PF10431 C-terminal, D2-small domain, of ClpB protein AI20_20685 PF02861 Clp amino terminal domain, pathogenicity island component AI20_20685 PF17871 AAA lid domain AI20_20685 PF07724 AAA domain (Cdc48 subfamily) AI20_20685 PF00004 ATPase family associated with various cellular activities (AAA) AI20_20695 PF03590 Aspartate-ammonia ligase AI20_20700 PF01037 Lrp/AsnC ligand binding domain AI20_20710 PF10063 Uncharacterized integral membrane protein (DUF2301) AI20_20715 PF00478 IMP dehydrogenase / GMP reductase domain AI20_20715 PF00571 CBS domain AI20_20735 PF00512 His Kinase A (phospho-acceptor) domain AI20_20735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_20745 PF00158 Sigma-54 interaction domain AI20_20745 PF00072 Response regulator receiver domain AI20_20750 PF06496 Protein of unknown function (DUF1097) AI20_20760 PF00174 Oxidoreductase molybdopterin binding domain AI20_20765 PF01794 Ferric reductase like transmembrane component AI20_20780 PF00072 Response regulator receiver domain AI20_20780 PF00486 Transcriptional regulatory protein, C terminal AI20_20785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_20785 PF08918 PhoQ Sensor AI20_20795 PF01568 Molydopterin dinucleotide binding domain AI20_20795 PF18364 Molybdopterin oxidoreductase N-terminal domain AI20_20795 PF00384 Molybdopterin oxidoreductase AI20_20800 PF03264 NapC/NirT cytochrome c family, N-terminal region AI20_20805 PF01751 Toprim domain AI20_20805 PF01131 DNA topoisomerase AI20_20820 PF12852 Cupin AI20_20820 PF12833 Helix-turn-helix domain AI20_20825 PF02386 Cation transport protein AI20_20830 PF02254 TrkA-N domain AI20_20830 PF02080 TrkA-C domain AI20_20835 PF01565 FAD binding domain AI20_20835 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AI20_20840 PF08279 HTH domain AI20_20840 PF03099 Biotin/lipoate A/B protein ligase family AI20_20840 PF02237 Biotin protein ligase C terminal domain AI20_20845 PF00485 Phosphoribulokinase / Uridine kinase family AI20_20860 PF00009 Elongation factor Tu GTP binding domain AI20_20860 PF03143 Elongation factor Tu C-terminal domain AI20_20860 PF03144 Elongation factor Tu domain 2 AI20_20870 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AI20_20875 PF00467 KOW motif AI20_20875 PF02357 Transcription termination factor nusG AI20_20880 PF03946 Ribosomal protein L11, N-terminal domain AI20_20880 PF00298 Ribosomal protein L11, RNA binding domain AI20_20885 PF00687 Ribosomal protein L1p/L10e family AI20_20890 PF00466 Ribosomal protein L10 AI20_20895 PF00542 Ribosomal protein L7/L12 C-terminal domain AI20_20895 PF16320 Ribosomal protein L7/L12 dimerisation domain AI20_20900 PF04560 RNA polymerase Rpb2, domain 7 AI20_20900 PF10385 RNA polymerase beta subunit external 1 domain AI20_20900 PF04565 RNA polymerase Rpb2, domain 3 AI20_20900 PF04561 RNA polymerase Rpb2, domain 2 AI20_20900 PF00562 RNA polymerase Rpb2, domain 6 AI20_20900 PF04563 RNA polymerase beta subunit AI20_20905 PF00623 RNA polymerase Rpb1, domain 2 AI20_20905 PF04983 RNA polymerase Rpb1, domain 3 AI20_20905 PF05000 RNA polymerase Rpb1, domain 4 AI20_20905 PF04998 RNA polymerase Rpb1, domain 5 AI20_20905 PF04997 RNA polymerase Rpb1, domain 1 AI20_20910 PF13309 HTH domain AI20_20910 PF08348 YheO-like PAS domain AI20_20915 PF01042 Endoribonuclease L-PSP AI20_20920 PF02635 DsrE/DsrF-like family AI20_20925 PF02635 DsrE/DsrF-like family AI20_20930 PF04077 DsrH like protein AI20_20940 PF00177 Ribosomal protein S7p/S5e AI20_20945 PF14492 Elongation Factor G, domain II AI20_20945 PF00679 Elongation factor G C-terminus AI20_20945 PF03764 Elongation factor G, domain IV AI20_20945 PF03144 Elongation factor Tu domain 2 AI20_20945 PF00009 Elongation factor Tu GTP binding domain AI20_20950 PF03144 Elongation factor Tu domain 2 AI20_20950 PF03143 Elongation factor Tu C-terminal domain AI20_20950 PF00009 Elongation factor Tu GTP binding domain AI20_20990 PF00860 Permease family AI20_20995 PF02733 Dak1 domain AI20_21000 PF02734 DAK2 domain AI20_21005 PF00381 PTS HPr component phosphorylation site AI20_21005 PF03610 PTS system fructose IIA component AI20_21005 PF00391 PEP-utilising enzyme, mobile domain AI20_21005 PF05524 PEP-utilising enzyme, N-terminal AI20_21010 PF00465 Iron-containing alcohol dehydrogenase AI20_21015 PF02954 Bacterial regulatory protein, Fis family AI20_21015 PF00989 PAS fold AI20_21015 PF00158 Sigma-54 interaction domain AI20_21020 PF03466 LysR substrate binding domain AI20_21020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_21025 PF04371 Porphyromonas-type peptidyl-arginine deiminase AI20_21030 PF00106 short chain dehydrogenase AI20_21035 PF01594 AI-2E family transporter AI20_21065 PF00583 Acetyltransferase (GNAT) family AI20_21085 PF00990 Diguanylate cyclase, GGDEF domain AI20_21095 PF08402 TOBE domain AI20_21095 PF00005 ABC transporter AI20_21105 PF00528 Binding-protein-dependent transport system inner membrane component AI20_21120 PF07702 UTRA domain AI20_21120 PF00392 Bacterial regulatory proteins, gntR family AI20_21130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_21130 PF03466 LysR substrate binding domain AI20_21140 PF02678 Pirin AI20_21140 PF17954 Quercetinase C-terminal cupin domain AI20_21145 PF07681 DoxX AI20_21150 PF17946 RecC C-terminal domain AI20_21155 PF13361 UvrD-like helicase C-terminal domain AI20_21155 PF00580 UvrD/REP helicase N-terminal domain AI20_21155 PF12705 PD-(D/E)XK nuclease superfamily AI20_21160 PF13538 UvrD-like helicase C-terminal domain AI20_21165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_21165 PF03466 LysR substrate binding domain AI20_21175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AI20_21185 PF00990 Diguanylate cyclase, GGDEF domain AI20_21185 PF00072 Response regulator receiver domain AI20_21210 PF00072 Response regulator receiver domain AI20_21210 PF00486 Transcriptional regulatory protein, C terminal AI20_21215 PF00512 His Kinase A (phospho-acceptor) domain AI20_21215 PF00672 HAMP domain AI20_21215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AI20_21220 PF00563 EAL domain AI20_21220 PF01590 GAF domain AI20_21220 PF00990 Diguanylate cyclase, GGDEF domain AI20_21220 PF00360 Phytochrome region AI20_21225 PF00593 TonB dependent receptor AI20_21225 PF07715 TonB-dependent Receptor Plug Domain AI20_21230 PF00313 'Cold-shock' DNA-binding domain AI20_21240 PF16916 Dimerisation domain of Zinc Transporter AI20_21240 PF01545 Cation efflux family AI20_21255 PF00817 impB/mucB/samB family AI20_21255 PF13438 Domain of unknown function (DUF4113) AI20_21255 PF11799 impB/mucB/samB family C-terminal domain AI20_21270 PF02909 Tetracyclin repressor-like, C-terminal domain AI20_21270 PF00440 Bacterial regulatory proteins, tetR family AI20_21275 PF07690 Major Facilitator Superfamily AI20_21285 PF14490 Helix-hairpin-helix containing domain AI20_21285 PF13538 UvrD-like helicase C-terminal domain AI20_21285 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AI20_21300 PF00436 Single-strand binding protein family AI20_21305 PF00196 Bacterial regulatory proteins, luxR family AI20_21310 PF00005 ABC transporter AI20_21310 PF17755 UvrA DNA-binding domain AI20_21310 PF17760 UvrA interaction domain AI20_21315 PF00990 Diguanylate cyclase, GGDEF domain AI20_21315 PF07694 5TMR of 5TMR-LYT AI20_21325 PF03922 OmpW family AI20_21330 PF00672 HAMP domain AI20_21330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_21350 PF02219 Methylenetetrahydrofolate reductase AI20_21360 PF03594 Benzoate membrane transport protein AI20_21365 PF07883 Cupin domain AI20_21365 PF01381 Helix-turn-helix AI20_21395 PF04363 Protein of unknown function (DUF496) AI20_21405 PF04751 Protein of unknown function (DUF615) AI20_21410 PF01523 Putative modulator of DNA gyrase AI20_21415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AI20_21420 PF01722 BolA-like protein AI20_21430 PF05494 MlaC protein AI20_21435 PF02470 MlaD protein AI20_21440 PF02405 Permease MlaE AI20_21445 PF00005 ABC transporter AI20_21450 PF00571 CBS domain AI20_21450 PF01380 SIS domain AI20_21460 PF06835 Lipopolysaccharide-assembly, LptC-related AI20_21465 PF03968 OstA-like protein AI20_21470 PF12399 Branched-chain amino acid ATP-binding cassette transporter AI20_21470 PF00005 ABC transporter AI20_21475 PF04963 Sigma-54 factor, core binding domain AI20_21475 PF04552 Sigma-54, DNA binding domain AI20_21475 PF00309 Sigma-54 factor, Activator interacting domain (AID) AI20_21480 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AI20_21485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AI20_21490 PF03668 P-loop ATPase protein family AI20_21495 PF00381 PTS HPr component phosphorylation site AI20_21500 PF08279 HTH domain AI20_21500 PF05043 Mga helix-turn-helix domain AI20_21500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AI20_21500 PF00874 PRD domain AI20_21505 PF07071 KDGP aldolase AI20_21510 PF03841 L-seryl-tRNA selenium transferase AI20_21515 PF01979 Amidohydrolase family AI20_21545 PF13180 PDZ domain AI20_21550 PF13180 PDZ domain AI20_21550 PF00595 PDZ domain AI20_21560 PF03969 AFG1-like ATPase AI20_21565 PF00572 Ribosomal protein L13 AI20_21570 PF00380 Ribosomal protein S9/S16 AI20_21575 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AI20_21575 PF00355 Rieske [2Fe-2S] domain AI20_21580 PF00032 Cytochrome b(C-terminal)/b6/petD AI20_21580 PF00033 Cytochrome b/b6/petB AI20_21585 PF02167 Cytochrome C1 family AI20_21590 PF00043 Glutathione S-transferase, C-terminal domain AI20_21590 PF02798 Glutathione S-transferase, N-terminal domain AI20_21595 PF04386 Stringent starvation protein B AI20_21600 PF04972 BON domain AI20_21605 PF13580 SIS domain AI20_21610 PF02021 Uncharacterised protein family UPF0102 AI20_21615 PF04348 LppC putative lipoprotein AI20_21620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AI20_21625 PF02381 MraZ protein, putative antitoxin-like AI20_21630 PF01795 MraW methylase family AI20_21635 PF04999 Cell division protein FtsL AI20_21640 PF03717 Penicillin-binding Protein dimerisation domain AI20_21640 PF00905 Penicillin binding protein transpeptidase domain AI20_21645 PF02875 Mur ligase family, glutamate ligase domain AI20_21645 PF01225 Mur ligase family, catalytic domain AI20_21645 PF08245 Mur ligase middle domain AI20_21650 PF08245 Mur ligase middle domain AI20_21650 PF02875 Mur ligase family, glutamate ligase domain AI20_21650 PF01225 Mur ligase family, catalytic domain AI20_21660 PF08245 Mur ligase middle domain AI20_21660 PF02875 Mur ligase family, glutamate ligase domain AI20_21665 PF01098 Cell cycle protein AI20_21670 PF04101 Glycosyltransferase family 28 C-terminal domain AI20_21670 PF03033 Glycosyltransferase family 28 N-terminal domain AI20_21675 PF01225 Mur ligase family, catalytic domain AI20_21675 PF08245 Mur ligase middle domain AI20_21675 PF02875 Mur ligase family, glutamate ligase domain AI20_21680 PF03799 Cell division protein FtsQ AI20_21680 PF08478 POTRA domain, FtsQ-type AI20_21685 PF02491 SHS2 domain inserted in FTSA AI20_21690 PF12327 FtsZ family, C-terminal domain AI20_21690 PF00091 Tubulin/FtsZ family, GTPase domain AI20_21695 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AI20_21705 PF07516 SecA Wing and Scaffold domain AI20_21705 PF01043 SecA preprotein cross-linking domain AI20_21705 PF07517 SecA DEAD-like domain AI20_21705 PF02810 SEC-C motif AI20_21715 PF00293 NUDIX domain AI20_21720 PF03884 DNA gyrase inhibitor YacG AI20_21725 PF07072 Cell division protein AI20_21730 PF01121 Dephospho-CoA kinase AI20_21735 PF01478 Type IV leader peptidase family AI20_21735 PF06750 Bacterial Peptidase A24 N-terminal domain AI20_21740 PF00482 Type II secretion system (T2SS), protein F AI20_21745 PF00437 Type II/IV secretion system protein AI20_21745 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AI20_21755 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AI20_21755 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AI20_21765 PF01510 N-acetylmuramoyl-L-alanine amidase AI20_21770 PF00392 Bacterial regulatory proteins, gntR family AI20_21770 PF07729 FCD domain AI20_21775 PF17831 Pyruvate dehydrogenase E1 component middle domain AI20_21775 PF00456 Transketolase, thiamine diphosphate binding domain AI20_21780 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AI20_21780 PF00364 Biotin-requiring enzyme AI20_21780 PF02817 e3 binding domain AI20_21785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AI20_21785 PF07992 Pyridine nucleotide-disulphide oxidoreductase AI20_21795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_21795 PF00672 HAMP domain AI20_21795 PF12729 Four helix bundle sensory module for signal transduction AI20_21800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AI20_21800 PF00672 HAMP domain AI20_21800 PF12729 Four helix bundle sensory module for signal transduction AI20_21805 PF01734 Patatin-like phospholipase AI20_21810 PF11791 Aconitate B N-terminal domain AI20_21810 PF00330 Aconitase family (aconitate hydratase) AI20_21810 PF06434 Aconitate hydratase 2 N-terminus AI20_21815 PF12792 CSS motif domain associated with EAL AI20_21815 PF00563 EAL domain AI20_21820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AI20_21820 PF03466 LysR substrate binding domain AI20_21825 PF01810 LysE type translocator AI20_21830 PF01565 FAD binding domain AI20_21830 PF04030 D-arabinono-1,4-lactone oxidase AI20_21835 PF02492 CobW/HypB/UreG, nucleotide-binding domain AI20_21835 PF07683 Cobalamin synthesis protein cobW C-terminal domain AI20_21840 PF07690 Major Facilitator Superfamily AI20_21850 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AI20_21855 PF02152 Dihydroneopterin aldolase AI20_21860 PF02660 Glycerol-3-phosphate acyltransferase AI20_21950 PF00749 tRNA synthetases class I (E and Q), catalytic domain AI20_22030 PF01584 CheW-like domain AI20_22030 PF00072 Response regulator receiver domain AI20_22090 PF00583 Acetyltransferase (GNAT) family AI20_22095 PF00753 Metallo-beta-lactamase superfamily AI20_22100 PF00753 Metallo-beta-lactamase superfamily AI20_22135 PF00182 Chitinase class I AI20_22140 PF03918 Cytochrome C biogenesis protein