BFW97_00005 SM00382 ATPases associated with a variety of cellular activities BFW97_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain BFW97_00010 SM00480 DNA polymerase III beta subunit BFW97_00020 SM00387 Histidine kinase-like ATPases BFW97_00020 SM00433 TopoisomeraseII BFW97_00055 SM00342 helix_turn_helix, arabinose operon control protein BFW97_00065 SM00448 cheY-homologous receiver domain BFW97_00065 SM00862 Transcriptional regulatory protein, C terminal BFW97_00070 SM00387 Histidine kinase-like ATPases BFW97_00070 SM00388 His Kinase A (phosphoacceptor) domain BFW97_00095 SM00530 Helix-turn-helix XRE-family like proteins BFW97_00130 SM00091 PAS domain BFW97_00130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_00130 SM00387 Histidine kinase-like ATPases BFW97_00170 SM00458 Ricin-type beta-trefoil BFW97_00190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_00190 SM00387 Histidine kinase-like ATPases BFW97_00190 SM00388 His Kinase A (phosphoacceptor) domain BFW97_00195 SM00448 cheY-homologous receiver domain BFW97_00225 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW97_00225 SM00954 Region found in RelA / SpoT proteins BFW97_00230 SM01409 BFW97_00230 BFW97_00235 SM00072 Guanylate kinase homologues. BFW97_00250 SM00267 diguanylate cyclase BFW97_00290 SM00267 diguanylate cyclase BFW97_00340 SM00421 helix_turn_helix, Lux Regulon BFW97_00340 SM00448 cheY-homologous receiver domain BFW97_00345 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_00345 SM00387 Histidine kinase-like ATPases BFW97_00345 SM00388 His Kinase A (phosphoacceptor) domain BFW97_00345 SM00448 cheY-homologous receiver domain BFW97_00355 SM00387 Histidine kinase-like ATPases BFW97_00360 SM00448 cheY-homologous receiver domain BFW97_00360 SM00850 LytTr DNA-binding domain BFW97_00375 SM01001 AIR carboxylase BFW97_00405 SM00360 RNA recognition motif BFW97_00455 SM00052 Putative diguanylate phosphodiesterase BFW97_00455 SM00267 diguanylate cyclase BFW97_00465 SM00829 Enoylreductase BFW97_00535 SM00422 helix_turn_helix, mercury resistance BFW97_00540 SM00267 diguanylate cyclase BFW97_00570 SM00382 ATPases associated with a variety of cellular activities BFW97_00575 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_00600 SM00563 Phosphate acyltransferases BFW97_00605 SM00563 Phosphate acyltransferases BFW97_00610 SM00382 ATPases associated with a variety of cellular activities BFW97_00650 SM00487 DEAD-like helicases superfamily BFW97_00650 SM00490 helicase superfamily c-terminal domain BFW97_00665 SM00919 Malic enzyme, NAD binding domain BFW97_00665 SM01274 BFW97_00665 BFW97_00675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_00675 SM00387 Histidine kinase-like ATPases BFW97_00675 SM00388 His Kinase A (phosphoacceptor) domain BFW97_00680 SM00448 cheY-homologous receiver domain BFW97_00680 SM00862 Transcriptional regulatory protein, C terminal BFW97_00700 SM00642 Alpha-amylase domain BFW97_00745 SM01230 BFW97_00745 BFW97_00765 SM00382 ATPases associated with a variety of cellular activities BFW97_00800 SM00341 Helicase and RNase D C-terminal BFW97_00800 SM00487 DEAD-like helicases superfamily BFW97_00800 SM00490 helicase superfamily c-terminal domain BFW97_00800 SM00956 BFW97_00800 BFW97_00830 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_00830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_00830 SM01358 BFW97_00830 BFW97_00835 SM00924 MgtE intracellular N domain BFW97_00870 SM00382 ATPases associated with a variety of cellular activities BFW97_00870 SM01086 C-terminal, D2-small domain, of ClpB protein BFW97_00885 SM00836 DALR anticodon binding domain BFW97_00885 SM01016 Arginyl tRNA synthetase N terminal dom BFW97_00890 SM00464 Found in ATP-dependent protease La (LON) BFW97_00935 SM00354 helix_turn _helix lactose operon repressor BFW97_00940 SM01038 Beta galactosidase small chain BFW97_00950 SM00382 ATPases associated with a variety of cellular activities BFW97_00960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_00960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_01025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_01025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_01035 SM00342 helix_turn_helix, arabinose operon control protein BFW97_01045 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BFW97_01045 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BFW97_01085 SM00363 S4 RNA-binding domain BFW97_01095 SM00382 ATPases associated with a variety of cellular activities BFW97_01095 SM01086 C-terminal, D2-small domain, of ClpB protein BFW97_01100 SM00849 Metallo-beta-lactamase superfamily BFW97_01110 SM00344 helix_turn_helix ASNC type BFW97_01115 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_01125 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW97_01140 SM00387 Histidine kinase-like ATPases BFW97_01140 SM00388 His Kinase A (phosphoacceptor) domain BFW97_01150 SM00382 ATPases associated with a variety of cellular activities BFW97_01150 SM00448 cheY-homologous receiver domain BFW97_01180 SM00448 cheY-homologous receiver domain BFW97_01180 SM00862 Transcriptional regulatory protein, C terminal BFW97_01185 SM00387 Histidine kinase-like ATPases BFW97_01205 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BFW97_01205 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BFW97_01205 SM00493 BFW97_01205 BFW97_01220 SM00342 helix_turn_helix, arabinose operon control protein BFW97_01275 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BFW97_01275 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BFW97_01280 SM00649 Ribosomal protein L11/L12 BFW97_01305 SM00663 RNA polymerase I subunit A N-terminus BFW97_01310 SM01126 BFW97_01310 BFW97_01350 SM00838 Elongation factor G C-terminus BFW97_01350 SM00889 Elongation factor G, domain IV BFW97_01410 SM01120 BFW97_01410 BFW97_01425 SM00091 PAS domain BFW97_01440 SM00822 BFW97_01440 BFW97_01450 SM00014 Acid phosphatase homologues BFW97_01475 SM01060 BFW97_01475 BFW97_01485 SM00342 helix_turn_helix, arabinose operon control protein BFW97_01485 SM00871 Bacterial transcription activator, effector binding domain BFW97_01500 SM00267 diguanylate cyclase BFW97_01510 SM00382 ATPases associated with a variety of cellular activities BFW97_01535 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW97_01535 SM00866 BFW97_01535 BFW97_01540 SM00530 Helix-turn-helix XRE-family like proteins BFW97_01595 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW97_01595 SM00091 PAS domain BFW97_01595 SM00267 diguanylate cyclase BFW97_01620 SM00448 cheY-homologous receiver domain BFW97_01620 SM00862 Transcriptional regulatory protein, C terminal BFW97_01625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_01625 SM00387 Histidine kinase-like ATPases BFW97_01625 SM00388 His Kinase A (phosphoacceptor) domain BFW97_01630 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_01630 SM00267 diguanylate cyclase BFW97_01640 SM00357 Cold shock protein domain BFW97_01655 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_01665 SM00421 helix_turn_helix, Lux Regulon BFW97_01685 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_01685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_01715 SM00530 Helix-turn-helix XRE-family like proteins BFW97_01800 SM00382 ATPases associated with a variety of cellular activities BFW97_01805 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW97_01825 SM00382 ATPases associated with a variety of cellular activities BFW97_01900 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BFW97_01905 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BFW97_01955 SM00749 bacterial OsmY and nodulation domain BFW97_02045 SM00842 Cell division protein FtsA BFW97_02050 SM00864 Tubulin/FtsZ family, GTPase domain BFW97_02050 SM00865 Tubulin/FtsZ family, C-terminal domain BFW97_02065 SM00957 SecA DEAD-like domain BFW97_02065 SM00958 SecA preprotein cross-linking domain BFW97_02130 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW97_02130 SM00895 BFW97_02130 BFW97_02150 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BFW97_02150 SM00267 diguanylate cyclase BFW97_02160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_02165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_02165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_02200 SM00833 Cobalamin synthesis protein cobW C-terminal domain BFW97_02220 SM00905 Dihydroneopterin aldolase BFW97_02225 SM01207 BFW97_02225 BFW97_02270 SM00260 Two component signalling adaptor domain BFW97_02270 SM00448 cheY-homologous receiver domain BFW97_02305 SM00851 MGS-like domain BFW97_02320 SM00870 BFW97_02320 BFW97_02335 SM00354 helix_turn _helix lactose operon repressor BFW97_02345 SM00642 Alpha-amylase domain BFW97_02350 SM01266 BFW97_02350 BFW97_02355 SM00344 helix_turn_helix ASNC type BFW97_02385 SM00382 ATPases associated with a variety of cellular activities BFW97_02455 SM01130 BFW97_02455 BFW97_02460 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BFW97_02460 SM00267 diguanylate cyclase BFW97_02500 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_02525 SM00478 endonuclease III BFW97_02525 SM00525 BFW97_02525 BFW97_02535 SM00382 ATPases associated with a variety of cellular activities BFW97_02545 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW97_02575 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW97_02585 SM00450 Rhodanese Homology Domain BFW97_02610 SM01118 BFW97_02610 BFW97_02680 SM00387 Histidine kinase-like ATPases BFW97_02680 SM00433 TopoisomeraseII BFW97_02685 SM00434 DNA Topoisomerase IV BFW97_02720 SM00271 DnaJ molecular chaperone homology domain BFW97_02750 SM00563 Phosphate acyltransferases BFW97_02785 SM00986 Uracil DNA glycosylase superfamily BFW97_02785 SM00987 UreE urease accessory protein, C-terminal domain BFW97_02805 SM00382 ATPases associated with a variety of cellular activities BFW97_02845 SM00347 helix_turn_helix multiple antibiotic resistance protein BFW97_02860 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BFW97_02860 SM00534 ATPase domain of DNA mismatch repair MUTS family BFW97_02890 SM00382 ATPases associated with a variety of cellular activities BFW97_02900 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BFW97_02955 SM01091 Transporter associated domain BFW97_03170 SM00530 Helix-turn-helix XRE-family like proteins BFW97_03275 SM01133 BFW97_03275 BFW97_03280 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BFW97_03295 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BFW97_03295 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW97_03295 SM00091 PAS domain BFW97_03295 SM00267 diguanylate cyclase BFW97_03320 SM00382 ATPases associated with a variety of cellular activities BFW97_03335 SM00411 bacterial (prokaryotic) histone like domain BFW97_03380 SM00487 DEAD-like helicases superfamily BFW97_03380 SM00490 helicase superfamily c-terminal domain BFW97_03395 SM00382 ATPases associated with a variety of cellular activities BFW97_03415 SM01152 BFW97_03415 BFW97_03475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_03475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_03480 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BFW97_03485 SM00382 ATPases associated with a variety of cellular activities BFW97_03615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_03615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_03630 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BFW97_03640 SM00642 Alpha-amylase domain BFW97_03645 SM00642 Alpha-amylase domain BFW97_03665 SM00829 Enoylreductase BFW97_03675 SM00347 helix_turn_helix multiple antibiotic resistance protein BFW97_03690 SM00344 helix_turn_helix ASNC type BFW97_03755 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW97_03855 SM00382 ATPases associated with a variety of cellular activities BFW97_03860 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW97_03870 SM00244 prohibitin homologues BFW97_03915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_03935 SM00382 ATPases associated with a variety of cellular activities BFW97_03990 SM00382 ATPases associated with a variety of cellular activities BFW97_04020 SM00450 Rhodanese Homology Domain BFW97_04065 SM00487 DEAD-like helicases superfamily BFW97_04065 SM00490 helicase superfamily c-terminal domain BFW97_04065 SM00847 Helicase associated domain (HA2) Add an annotation BFW97_04095 SM00448 cheY-homologous receiver domain BFW97_04095 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW97_04105 SM00014 Acid phosphatase homologues BFW97_04200 SM00382 ATPases associated with a variety of cellular activities BFW97_04210 SM00448 cheY-homologous receiver domain BFW97_04225 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BFW97_04265 SM00327 von Willebrand factor (vWF) type A domain BFW97_04270 SM00260 Two component signalling adaptor domain BFW97_04270 SM00448 cheY-homologous receiver domain BFW97_04280 SM00382 ATPases associated with a variety of cellular activities BFW97_04295 SM00052 Putative diguanylate phosphodiesterase BFW97_04325 SM00450 Rhodanese Homology Domain BFW97_04340 SM00382 ATPases associated with a variety of cellular activities BFW97_04370 SM00052 Putative diguanylate phosphodiesterase BFW97_04370 SM00091 PAS domain BFW97_04370 SM00267 diguanylate cyclase BFW97_04405 SM00479 BFW97_04405 BFW97_04445 SM00357 Cold shock protein domain BFW97_04455 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_04455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_04500 SM00495 Chitin-binding domain type 3 BFW97_04500 SM00636 BFW97_04500 BFW97_04505 SM00028 Tetratricopeptide repeats BFW97_04555 SM00382 ATPases associated with a variety of cellular activities BFW97_04560 SM00382 ATPases associated with a variety of cellular activities BFW97_04585 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BFW97_04615 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BFW97_04625 SM01012 BFW97_04625 BFW97_04640 SM00382 ATPases associated with a variety of cellular activities BFW97_04665 SM01057 Eukaryotic-type carbonic anhydrase BFW97_04675 SM00477 DNA/RNA non-specific endonuclease BFW97_04675 SM00892 DNA/RNA non-specific endonuclease BFW97_04700 SM00563 Phosphate acyltransferases BFW97_04760 SM00825 Beta-ketoacyl synthase BFW97_04770 SM00822 BFW97_04770 BFW97_04775 SM00825 Beta-ketoacyl synthase BFW97_04785 SM00852 Probable molybdopterin binding domain BFW97_04810 SM00382 ATPases associated with a variety of cellular activities BFW97_04850 SM00937 BFW97_04850 BFW97_04855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_04855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_04865 SM00870 BFW97_04865 BFW97_04875 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BFW97_04905 SM01266 BFW97_04905 BFW97_04920 SM00829 Enoylreductase BFW97_04945 SM00878 Biotin carboxylase C-terminal domain BFW97_04970 SM00052 Putative diguanylate phosphodiesterase BFW97_04970 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW97_04970 SM00091 PAS domain BFW97_04970 SM00267 diguanylate cyclase BFW97_05040 SM00020 Trypsin-like serine protease BFW97_05065 SM00382 ATPases associated with a variety of cellular activities BFW97_05085 SM00861 Transketolase, pyrimidine binding domain BFW97_05120 SM01103 BFW97_05120 BFW97_05130 SM00382 ATPases associated with a variety of cellular activities BFW97_05170 SM00316 Ribosomal protein S1-like RNA-binding domain BFW97_05190 SM01387 BFW97_05190 BFW97_05195 SM00316 Ribosomal protein S1-like RNA-binding domain BFW97_05195 SM00322 K homology RNA-binding domain BFW97_05205 SM00267 diguanylate cyclase BFW97_05235 SM00448 cheY-homologous receiver domain BFW97_05235 SM00850 LytTr DNA-binding domain BFW97_05245 SM00421 helix_turn_helix, Lux Regulon BFW97_05245 SM00448 cheY-homologous receiver domain BFW97_05250 SM00387 Histidine kinase-like ATPases BFW97_05250 SM00388 His Kinase A (phosphoacceptor) domain BFW97_05265 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BFW97_05340 SM00422 helix_turn_helix, mercury resistance BFW97_05370 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW97_05385 SM00936 Penicillin-binding protein 5, C-terminal domain BFW97_05450 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW97_05450 SM01091 Transporter associated domain BFW97_05465 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW97_05480 SM00357 Cold shock protein domain BFW97_05485 SM00267 diguanylate cyclase BFW97_05510 SM00267 diguanylate cyclase BFW97_05535 SM00841 Elongation factor P, C-terminal BFW97_05535 SM01185 BFW97_05535 BFW97_05545 SM01240 BFW97_05545 BFW97_05555 SM00387 Histidine kinase-like ATPases BFW97_05555 SM00388 His Kinase A (phosphoacceptor) domain BFW97_05560 SM00448 cheY-homologous receiver domain BFW97_05560 SM00862 Transcriptional regulatory protein, C terminal BFW97_05570 SM00822 BFW97_05570 BFW97_05575 SM01236 BFW97_05575 BFW97_05635 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_05635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_05675 SM00849 Metallo-beta-lactamase superfamily BFW97_05685 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_05685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_05700 SM00842 Cell division protein FtsA BFW97_05720 SM00965 Secretin and TonB N terminus short domain BFW97_05785 SM01150 BFW97_05785 BFW97_05800 SM00890 Domain of unknown function BFW97_05810 SM00642 Alpha-amylase domain BFW97_05820 SM01022 BFW97_05820 BFW97_05825 SM00100 Cyclic nucleotide-monophosphate binding domain BFW97_05900 SM01400 BFW97_05900 BFW97_05925 SM00937 BFW97_05925 BFW97_05960 SM00986 Uracil DNA glycosylase superfamily BFW97_05960 SM00987 UreE urease accessory protein, C-terminal domain BFW97_05985 SM00460 Transglutaminase/protease-like homologues BFW97_06010 SM00732 Likely ribonuclease with RNase H fold. BFW97_06020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_06040 SM00731 SprT homologues. BFW97_06050 SM00861 Transketolase, pyrimidine binding domain BFW97_06060 SM00052 Putative diguanylate phosphodiesterase BFW97_06095 SM00363 S4 RNA-binding domain BFW97_06105 SM00342 helix_turn_helix, arabinose operon control protein BFW97_06115 SM00788 Adenylosuccinate synthetase BFW97_06160 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BFW97_06160 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BFW97_06160 SM00493 BFW97_06160 BFW97_06175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_06195 SM00382 ATPases associated with a variety of cellular activities BFW97_06200 SM00382 ATPases associated with a variety of cellular activities BFW97_06220 SM00091 PAS domain BFW97_06220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_06220 SM00387 Histidine kinase-like ATPases BFW97_06220 SM00388 His Kinase A (phosphoacceptor) domain BFW97_06220 SM00448 cheY-homologous receiver domain BFW97_06270 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW97_06270 SM00091 PAS domain BFW97_06270 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_06280 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW97_06290 SM00852 Probable molybdopterin binding domain BFW97_06300 SM00382 ATPases associated with a variety of cellular activities BFW97_06315 SM00382 ATPases associated with a variety of cellular activities BFW97_06315 SM00448 cheY-homologous receiver domain BFW97_06320 SM00387 Histidine kinase-like ATPases BFW97_06320 SM00388 His Kinase A (phosphoacceptor) domain BFW97_06365 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BFW97_06380 SM00387 Histidine kinase-like ATPases BFW97_06380 SM00448 cheY-homologous receiver domain BFW97_06385 SM00919 Malic enzyme, NAD binding domain BFW97_06385 SM01274 BFW97_06385 BFW97_06485 SM00267 diguanylate cyclase BFW97_06510 SM00382 ATPases associated with a variety of cellular activities BFW97_06545 SM00382 ATPases associated with a variety of cellular activities BFW97_06550 SM00382 ATPases associated with a variety of cellular activities BFW97_06565 SM00448 cheY-homologous receiver domain BFW97_06565 SM00862 Transcriptional regulatory protein, C terminal BFW97_06630 SM00382 ATPases associated with a variety of cellular activities BFW97_06655 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_06655 SM00387 Histidine kinase-like ATPases BFW97_06655 SM00388 His Kinase A (phosphoacceptor) domain BFW97_06655 SM00448 cheY-homologous receiver domain BFW97_06655 SM00918 Ligated ion channel L-glutamate- and glycine-binding site BFW97_06705 SM00530 Helix-turn-helix XRE-family like proteins BFW97_06725 SM00528 Domain in histone-like proteins of HNS family BFW97_06750 SM00382 ATPases associated with a variety of cellular activities BFW97_06765 SM01131 BFW97_06765 BFW97_06795 SM00271 DnaJ molecular chaperone homology domain BFW97_06815 SM00640 Glycosyl hydrolases family 32 BFW97_06820 SM00354 helix_turn _helix lactose operon repressor BFW97_06840 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BFW97_06865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW97_06865 SM00091 PAS domain BFW97_06865 SM00267 diguanylate cyclase BFW97_06925 SM00028 Tetratricopeptide repeats BFW97_06925 SM00448 cheY-homologous receiver domain BFW97_07010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_07010 SM00387 Histidine kinase-like ATPases BFW97_07010 SM00388 His Kinase A (phosphoacceptor) domain BFW97_07010 SM00448 cheY-homologous receiver domain BFW97_07025 SM00448 cheY-homologous receiver domain BFW97_07025 SM00862 Transcriptional regulatory protein, C terminal BFW97_07115 SM00530 Helix-turn-helix XRE-family like proteins BFW97_07195 SM00247 Beta/gamma crystallins BFW97_07245 SM00481 DNA polymerase alpha chain like domain BFW97_07265 SM00363 S4 RNA-binding domain BFW97_07400 SM00487 DEAD-like helicases superfamily BFW97_07400 SM00490 helicase superfamily c-terminal domain BFW97_07425 SM00861 Transketolase, pyrimidine binding domain BFW97_07435 SM00357 Cold shock protein domain BFW97_07470 SM00420 helix_turn_helix, Deoxyribose operon repressor BFW97_07470 SM01134 BFW97_07470 BFW97_07495 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW97_07500 SM00363 S4 RNA-binding domain BFW97_07530 SM00858 BFW97_07530 BFW97_07535 SM00260 Two component signalling adaptor domain BFW97_07535 SM00448 cheY-homologous receiver domain BFW97_07540 SM00138 Methyltransferase, chemotaxis proteins BFW97_07585 SM00047 Lysozyme subfamily 2 BFW97_07600 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW97_07600 SM00924 MgtE intracellular N domain BFW97_07625 SM00382 ATPases associated with a variety of cellular activities BFW97_07630 SM00091 PAS domain BFW97_07630 SM00387 Histidine kinase-like ATPases BFW97_07630 SM00388 His Kinase A (phosphoacceptor) domain BFW97_07635 SM00382 ATPases associated with a variety of cellular activities BFW97_07635 SM00448 cheY-homologous receiver domain BFW97_07700 SM00382 ATPases associated with a variety of cellular activities BFW97_07710 SM01091 Transporter associated domain BFW97_07740 SM00382 ATPases associated with a variety of cellular activities BFW97_07750 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_07750 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BFW97_07755 SM00267 diguanylate cyclase BFW97_07765 SM00387 Histidine kinase-like ATPases BFW97_07770 SM00421 helix_turn_helix, Lux Regulon BFW97_07770 SM00448 cheY-homologous receiver domain BFW97_07795 SM00098 Alkaline phosphatase homologues BFW97_07800 SM00098 Alkaline phosphatase homologues BFW97_07825 SM00491 BFW97_07825 BFW97_07905 SM00873 B3/4 domain BFW97_07910 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW97_07915 SM01130 BFW97_07915 BFW97_07925 SM00344 helix_turn_helix ASNC type BFW97_07955 SM00528 Domain in histone-like proteins of HNS family BFW97_07990 SM00382 ATPases associated with a variety of cellular activities BFW97_08010 SM00421 helix_turn_helix, Lux Regulon BFW97_08010 SM00448 cheY-homologous receiver domain BFW97_08015 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BFW97_08015 SM00465 GIY-YIG type nucleases (URI domain) BFW97_08095 SM00382 ATPases associated with a variety of cellular activities BFW97_08230 SM00840 BFW97_08230 BFW97_08245 SM00267 diguanylate cyclase BFW97_08250 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_08255 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_08285 SM00899 BFW97_08285 BFW97_08310 SM00382 ATPases associated with a variety of cellular activities BFW97_08320 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_08330 SM00382 ATPases associated with a variety of cellular activities BFW97_08375 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BFW97_08380 SM00851 MGS-like domain BFW97_08380 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BFW97_08385 SM00917 LeuA allosteric (dimerisation) domain BFW97_08405 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BFW97_08420 SM00487 DEAD-like helicases superfamily BFW97_08420 SM00490 helicase superfamily c-terminal domain BFW97_08430 SM01351 BFW97_08430 BFW97_08445 SM00422 helix_turn_helix, mercury resistance BFW97_08460 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_08470 SM00382 ATPases associated with a variety of cellular activities BFW97_08485 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW97_08490 SM00382 ATPases associated with a variety of cellular activities BFW97_08510 SM00052 Putative diguanylate phosphodiesterase BFW97_08510 SM00267 diguanylate cyclase BFW97_08530 SM00327 von Willebrand factor (vWF) type A domain BFW97_08565 SM00342 helix_turn_helix, arabinose operon control protein BFW97_08570 SM01217 BFW97_08570 BFW97_08595 SM00342 helix_turn_helix, arabinose operon control protein BFW97_08595 SM00871 Bacterial transcription activator, effector binding domain BFW97_08610 SM00014 Acid phosphatase homologues BFW97_08620 SM00859 Semialdehyde dehydrogenase, NAD binding domain BFW97_08700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_08705 SM00267 diguanylate cyclase BFW97_08780 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW97_08780 SM01091 Transporter associated domain BFW97_08805 SM00487 DEAD-like helicases superfamily BFW97_08805 SM00490 helicase superfamily c-terminal domain BFW97_08815 SM00479 BFW97_08815 BFW97_08820 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_08835 SM00478 endonuclease III BFW97_08835 SM00525 BFW97_08835 BFW97_08845 SM00900 BFW97_08845 BFW97_08880 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW97_08880 SM00091 PAS domain BFW97_08880 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_08915 SM00487 DEAD-like helicases superfamily BFW97_08915 SM00490 helicase superfamily c-terminal domain BFW97_08935 SM00448 cheY-homologous receiver domain BFW97_08935 SM00850 LytTr DNA-binding domain BFW97_08940 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BFW97_08945 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW97_08980 SM00382 ATPases associated with a variety of cellular activities BFW97_08990 SM00382 ATPases associated with a variety of cellular activities BFW97_09000 SM01005 Alanine racemase, C-terminal domain BFW97_09035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_09035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_09275 SM00382 ATPases associated with a variety of cellular activities BFW97_09395 SM00530 Helix-turn-helix XRE-family like proteins BFW97_09400 SM00873 B3/4 domain BFW97_09405 SM01005 Alanine racemase, C-terminal domain BFW97_09410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_09410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_09415 SM00052 Putative diguanylate phosphodiesterase BFW97_09415 SM00448 cheY-homologous receiver domain BFW97_09420 SM00448 cheY-homologous receiver domain BFW97_09425 SM00138 Methyltransferase, chemotaxis proteins BFW97_09430 SM00260 Two component signalling adaptor domain BFW97_09435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_09440 SM00073 Histidine Phosphotransfer domain BFW97_09440 SM00260 Two component signalling adaptor domain BFW97_09440 SM00387 Histidine kinase-like ATPases BFW97_09440 SM01231 BFW97_09440 BFW97_09450 SM00448 cheY-homologous receiver domain BFW97_09500 SM00382 ATPases associated with a variety of cellular activities BFW97_09505 SM00382 ATPases associated with a variety of cellular activities BFW97_09600 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BFW97_09615 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BFW97_09615 SM00382 ATPases associated with a variety of cellular activities BFW97_09625 SM00493 BFW97_09625 BFW97_09630 SM00387 Histidine kinase-like ATPases BFW97_09700 SM00823 Phosphopantetheine attachment site BFW97_09705 SM00822 BFW97_09705 BFW97_09710 SM00823 Phosphopantetheine attachment site BFW97_09730 SM00382 ATPases associated with a variety of cellular activities BFW97_09775 SM00893 Electron transfer flavoprotein domain BFW97_09780 SM00893 Electron transfer flavoprotein domain BFW97_09800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_09800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_09805 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW97_09840 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW97_09840 SM01240 BFW97_09840 BFW97_09890 SM00342 helix_turn_helix, arabinose operon control protein BFW97_09900 SM00369 Leucine-rich repeats, typical (most populated) subfamily BFW97_09915 SM00855 Phosphoglycerate mutase family BFW97_09940 SM00487 DEAD-like helicases superfamily BFW97_09940 SM00490 helicase superfamily c-terminal domain BFW97_09940 SM00982 BFW97_09940 BFW97_09940 SM01058 CarD-like/TRCF domain BFW97_09955 SM00382 ATPases associated with a variety of cellular activities BFW97_09965 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW97_09985 SM00382 ATPases associated with a variety of cellular activities BFW97_09985 SM00994 ClpX C4-type zinc finger BFW97_09985 SM01086 C-terminal, D2-small domain, of ClpB protein BFW97_09990 SM00382 ATPases associated with a variety of cellular activities BFW97_09990 SM00464 Found in ATP-dependent protease La (LON) BFW97_10005 SM00382 ATPases associated with a variety of cellular activities BFW97_10020 SM00479 BFW97_10020 BFW97_10025 SM00100 Cyclic nucleotide-monophosphate binding domain BFW97_10025 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW97_10090 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_10095 SM00422 helix_turn_helix, mercury resistance BFW97_10105 SM00878 Biotin carboxylase C-terminal domain BFW97_10105 SM01209 BFW97_10105 BFW97_10150 SM00822 BFW97_10150 BFW97_10175 SM00885 D5 N terminal like BFW97_10185 SM00052 Putative diguanylate phosphodiesterase BFW97_10185 SM00448 cheY-homologous receiver domain BFW97_10190 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_10190 SM00073 Histidine Phosphotransfer domain BFW97_10190 SM00387 Histidine kinase-like ATPases BFW97_10190 SM00388 His Kinase A (phosphoacceptor) domain BFW97_10190 SM00448 cheY-homologous receiver domain BFW97_10205 SM00857 Resolvase, N terminal domain BFW97_10260 SM00267 diguanylate cyclase BFW97_10275 SM00052 Putative diguanylate phosphodiesterase BFW97_10275 SM00267 diguanylate cyclase BFW97_10285 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW97_10290 SM00822 BFW97_10290 BFW97_10300 SM00518 AP endonuclease family 2 BFW97_10330 SM00090 RIO-like kinase BFW97_10340 SM00267 diguanylate cyclase BFW97_10350 SM00486 DNA polymerase type-B family BFW97_10430 SM00347 helix_turn_helix multiple antibiotic resistance protein BFW97_10510 SM00422 helix_turn_helix, mercury resistance BFW97_10520 SM00052 Putative diguanylate phosphodiesterase BFW97_10550 SM00028 Tetratricopeptide repeats BFW97_10555 SM00327 von Willebrand factor (vWF) type A domain BFW97_10590 SM01322 BFW97_10590 BFW97_10615 SM00382 ATPases associated with a variety of cellular activities BFW97_10675 SM01092 CO dehydrogenase flavoprotein C-terminal domain BFW97_10680 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BFW97_10700 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BFW97_10705 SM01092 CO dehydrogenase flavoprotein C-terminal domain BFW97_10715 SM00237 Domains in Na-Ca exchangers and integrin-beta4 BFW97_10750 SM00073 Histidine Phosphotransfer domain BFW97_10750 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW97_10750 SM00091 PAS domain BFW97_10750 SM00387 Histidine kinase-like ATPases BFW97_10750 SM00388 His Kinase A (phosphoacceptor) domain BFW97_10750 SM00448 cheY-homologous receiver domain BFW97_10755 SM00091 PAS domain BFW97_10760 SM00448 cheY-homologous receiver domain BFW97_10760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW97_10800 SM00491 BFW97_10800 BFW97_10825 SM00341 Helicase and RNase D C-terminal BFW97_10825 SM00474 3'-5' exonuclease BFW97_10830 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_10925 SM00857 Resolvase, N terminal domain BFW97_10960 SM00382 ATPases associated with a variety of cellular activities BFW97_11020 SM00530 Helix-turn-helix XRE-family like proteins BFW97_11090 SM01060 BFW97_11090 BFW97_11095 SM00248 ankyrin repeats BFW97_11160 SM00528 Domain in histone-like proteins of HNS family BFW97_11310 SM00421 helix_turn_helix, Lux Regulon BFW97_11315 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW97_11320 SM00382 ATPases associated with a variety of cellular activities BFW97_11320 SM00487 DEAD-like helicases superfamily BFW97_11320 SM00490 helicase superfamily c-terminal domain BFW97_11320 SM00847 Helicase associated domain (HA2) Add an annotation BFW97_11335 SM00387 Histidine kinase-like ATPases BFW97_11335 SM00388 His Kinase A (phosphoacceptor) domain BFW97_11335 SM00448 cheY-homologous receiver domain BFW97_11340 SM00448 cheY-homologous receiver domain BFW97_11340 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW97_11345 SM00849 Metallo-beta-lactamase superfamily BFW97_11350 SM00450 Rhodanese Homology Domain BFW97_11375 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BFW97_11380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_11380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_11420 SM00316 Ribosomal protein S1-like RNA-binding domain BFW97_11425 SM00363 S4 RNA-binding domain BFW97_11475 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BFW97_11480 SM00822 BFW97_11480 BFW97_11490 SM00825 Beta-ketoacyl synthase BFW97_11510 SM00382 ATPases associated with a variety of cellular activities BFW97_11600 SM00822 BFW97_11600 BFW97_11635 SM00382 ATPases associated with a variety of cellular activities BFW97_11645 SM00981 BFW97_11645 BFW97_11675 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BFW97_11675 SM00245 tail specific protease BFW97_11680 SM00945 ProQ/FINO family BFW97_11735 SM00100 Cyclic nucleotide-monophosphate binding domain BFW97_11735 SM00419 helix_turn_helix, cAMP Regulatory protein BFW97_11770 SM00382 ATPases associated with a variety of cellular activities BFW97_11790 SM00354 helix_turn _helix lactose operon repressor BFW97_11820 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_11820 SM00387 Histidine kinase-like ATPases BFW97_11820 SM00388 His Kinase A (phosphoacceptor) domain BFW97_11820 SM00448 cheY-homologous receiver domain BFW97_11825 SM00411 bacterial (prokaryotic) histone like domain BFW97_11830 SM00873 B3/4 domain BFW97_11830 SM00874 tRNA synthetase B5 domain BFW97_11830 SM00896 Ferredoxin-fold anticodon binding domain BFW97_11855 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BFW97_11860 SM00671 Sel1-like repeats. BFW97_11870 SM00434 DNA Topoisomerase IV BFW97_11900 SM00925 MltA specific insert domain BFW97_11940 SM00354 helix_turn _helix lactose operon repressor BFW97_11965 SM00354 helix_turn _helix lactose operon repressor BFW97_11980 SM00953 BFW97_11980 BFW97_11985 SM00487 DEAD-like helicases superfamily BFW97_11985 SM00490 helicase superfamily c-terminal domain BFW97_11990 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_12005 SM00463 Small MutS-related domain BFW97_12015 SM00091 PAS domain BFW97_12015 SM00267 diguanylate cyclase BFW97_12020 SM00855 Phosphoglycerate mutase family BFW97_12045 SM00782 PhnA Zinc-Ribbon BFW97_12180 SM00642 Alpha-amylase domain BFW97_12195 SM00342 helix_turn_helix, arabinose operon control protein BFW97_12215 SM01144 BFW97_12215 BFW97_12230 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BFW97_12240 SM00487 DEAD-like helicases superfamily BFW97_12240 SM00490 helicase superfamily c-terminal domain BFW97_12265 SM01118 BFW97_12265 BFW97_12330 SM00382 ATPases associated with a variety of cellular activities BFW97_12335 SM00382 ATPases associated with a variety of cellular activities BFW97_12340 SM00387 Histidine kinase-like ATPases BFW97_12340 SM00388 His Kinase A (phosphoacceptor) domain BFW97_12340 SM00448 cheY-homologous receiver domain BFW97_12400 SM00487 DEAD-like helicases superfamily BFW97_12400 SM00490 helicase superfamily c-terminal domain BFW97_12405 SM00763 PrkA AAA domain BFW97_12420 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW97_12445 SM00487 DEAD-like helicases superfamily BFW97_12445 SM00490 helicase superfamily c-terminal domain BFW97_12460 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_12535 SM00528 Domain in histone-like proteins of HNS family BFW97_12580 SM00448 cheY-homologous receiver domain BFW97_12585 SM00091 PAS domain BFW97_12585 SM00387 Histidine kinase-like ATPases BFW97_12595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_12595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_12595 SM01049 BFW97_12595 BFW97_12700 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW97_12730 SM00342 helix_turn_helix, arabinose operon control protein BFW97_12730 SM00871 Bacterial transcription activator, effector binding domain BFW97_12735 SM00822 BFW97_12735 BFW97_12765 SM00859 Semialdehyde dehydrogenase, NAD binding domain BFW97_12805 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW97_12805 SM00866 BFW97_12805 BFW97_12815 SM00382 ATPases associated with a variety of cellular activities BFW97_12840 SM00881 CoA binding domain BFW97_12855 SM00861 Transketolase, pyrimidine binding domain BFW97_12895 SM00825 Beta-ketoacyl synthase BFW97_12960 SM00342 helix_turn_helix, arabinose operon control protein BFW97_12970 SM00382 ATPases associated with a variety of cellular activities BFW97_12985 SM01007 Class II Aldolase and Adducin N-terminal domain BFW97_13050 SM00267 diguanylate cyclase BFW97_13050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_13060 SM00091 PAS domain BFW97_13060 SM00382 ATPases associated with a variety of cellular activities BFW97_13105 SM00382 ATPases associated with a variety of cellular activities BFW97_13125 SM00382 ATPases associated with a variety of cellular activities BFW97_13130 SM00382 ATPases associated with a variety of cellular activities BFW97_13160 SM00382 ATPases associated with a variety of cellular activities BFW97_13170 SM00843 BFW97_13170 BFW97_13175 SM00344 helix_turn_helix ASNC type BFW97_13185 SM00267 diguanylate cyclase BFW97_13185 SM00448 cheY-homologous receiver domain BFW97_13205 SM00316 Ribosomal protein S1-like RNA-binding domain BFW97_13210 SM00382 ATPases associated with a variety of cellular activities BFW97_13210 SM01086 C-terminal, D2-small domain, of ClpB protein BFW97_13220 SM00357 Cold shock protein domain BFW97_13285 SM00382 ATPases associated with a variety of cellular activities BFW97_13290 SM00382 ATPases associated with a variety of cellular activities BFW97_13290 SM01086 C-terminal, D2-small domain, of ClpB protein BFW97_13340 SM00671 Sel1-like repeats. BFW97_13385 SM01154 BFW97_13385 BFW97_13400 SM00528 Domain in histone-like proteins of HNS family BFW97_13425 SM01144 BFW97_13425 BFW97_13435 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BFW97_13440 SM00028 Tetratricopeptide repeats BFW97_13450 SM00411 bacterial (prokaryotic) histone like domain BFW97_13455 SM00316 Ribosomal protein S1-like RNA-binding domain BFW97_13500 SM00052 Putative diguanylate phosphodiesterase BFW97_13500 SM00267 diguanylate cyclase BFW97_13515 SM00448 cheY-homologous receiver domain BFW97_13520 SM00091 PAS domain BFW97_13545 SM00360 RNA recognition motif BFW97_13610 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BFW97_13615 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BFW97_13615 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BFW97_13655 SM01126 BFW97_13655 BFW97_13660 SM01211 BFW97_13660 BFW97_13665 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_13680 SM00564 beta-propeller repeat BFW97_13700 SM00530 Helix-turn-helix XRE-family like proteins BFW97_13705 SM00028 Tetratricopeptide repeats BFW97_13715 SM00562 BFW97_13715 BFW97_13740 SM00271 DnaJ molecular chaperone homology domain BFW97_13790 SM00028 Tetratricopeptide repeats BFW97_13795 SM00450 Rhodanese Homology Domain BFW97_13810 SM01323 BFW97_13810 BFW97_13825 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW97_13865 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BFW97_13930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_13930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_13990 SM00858 BFW97_13990 BFW97_14060 SM00981 BFW97_14060 BFW97_14075 SM01359 BFW97_14075 BFW97_14075 SM01360 BFW97_14075 BFW97_14110 SM00450 Rhodanese Homology Domain BFW97_14115 SM00052 Putative diguanylate phosphodiesterase BFW97_14115 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW97_14115 SM00091 PAS domain BFW97_14115 SM00267 diguanylate cyclase BFW97_14140 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_14140 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BFW97_14145 SM00382 ATPases associated with a variety of cellular activities BFW97_14215 SM00382 ATPases associated with a variety of cellular activities BFW97_14290 SM00830 Chorismate mutase type II BFW97_14310 SM00420 helix_turn_helix, Deoxyribose operon repressor BFW97_14310 SM01134 BFW97_14310 BFW97_14375 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW97_14405 SM00871 Bacterial transcription activator, effector binding domain BFW97_14430 SM00363 S4 RNA-binding domain BFW97_14435 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BFW97_14455 SM00487 DEAD-like helicases superfamily BFW97_14455 SM00490 helicase superfamily c-terminal domain BFW97_14460 SM00855 Phosphoglycerate mutase family BFW97_14485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_14485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_14510 SM00563 Phosphate acyltransferases BFW97_14520 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BFW97_14530 SM00867 YceI-like domain BFW97_14550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_14550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_14560 SM00852 Probable molybdopterin binding domain BFW97_14575 SM00382 ATPases associated with a variety of cellular activities BFW97_14605 SM00852 Probable molybdopterin binding domain BFW97_14630 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BFW97_14645 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW97_14650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_14650 SM00387 Histidine kinase-like ATPases BFW97_14655 SM00421 helix_turn_helix, Lux Regulon BFW97_14655 SM00448 cheY-homologous receiver domain BFW97_14660 SM00464 Found in ATP-dependent protease La (LON) BFW97_14665 SM00387 Histidine kinase-like ATPases BFW97_14665 SM00388 His Kinase A (phosphoacceptor) domain BFW97_14665 SM00448 cheY-homologous receiver domain BFW97_14670 SM00897 FIST N domain BFW97_14670 SM01204 BFW97_14670 BFW97_14680 SM00073 Histidine Phosphotransfer domain BFW97_14700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW97_14710 SM00479 BFW97_14710 BFW97_14725 SM00849 Metallo-beta-lactamase superfamily BFW97_14730 SM00257 Lysin motif BFW97_14755 SM00354 helix_turn _helix lactose operon repressor BFW97_14765 SM00052 Putative diguanylate phosphodiesterase BFW97_14765 SM00267 diguanylate cyclase BFW97_14840 SM00382 ATPases associated with a variety of cellular activities BFW97_14855 SM00347 helix_turn_helix multiple antibiotic resistance protein BFW97_14910 SM01081 Putative carbohydrate binding domain BFW97_14990 SM00458 Ricin-type beta-trefoil BFW97_15065 SM00342 helix_turn_helix, arabinose operon control protein BFW97_15075 SM00890 Domain of unknown function BFW97_15090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_15115 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW97_15115 SM00876 Biotin and Thiamin Synthesis associated domain BFW97_15125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_15185 SM01091 Transporter associated domain BFW97_15210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_15210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_15280 SM00382 ATPases associated with a variety of cellular activities BFW97_15300 SM00858 BFW97_15300 BFW97_15330 SM00859 Semialdehyde dehydrogenase, NAD binding domain BFW97_15425 SM00959 Rho termination factor, N-terminal domain BFW97_15575 SM00487 DEAD-like helicases superfamily BFW97_15630 SM01329 BFW97_15630 BFW97_15635 SM00342 helix_turn_helix, arabinose operon control protein BFW97_15670 SM00354 helix_turn _helix lactose operon repressor BFW97_15750 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BFW97_15850 SM00382 ATPases associated with a variety of cellular activities BFW97_15860 SM00260 Two component signalling adaptor domain BFW97_15865 SM00260 Two component signalling adaptor domain BFW97_15885 SM00448 cheY-homologous receiver domain BFW97_15890 SM00073 Histidine Phosphotransfer domain BFW97_15890 SM00260 Two component signalling adaptor domain BFW97_15890 SM00387 Histidine kinase-like ATPases BFW97_15890 SM01231 BFW97_15890 BFW97_15900 SM00448 cheY-homologous receiver domain BFW97_15915 SM00382 ATPases associated with a variety of cellular activities BFW97_15915 SM00962 SRP54-type protein, GTPase domain BFW97_15975 SM00382 ATPases associated with a variety of cellular activities BFW97_16005 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW97_16010 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW97_16035 SM00382 ATPases associated with a variety of cellular activities BFW97_16045 SM00382 ATPases associated with a variety of cellular activities BFW97_16050 SM00448 cheY-homologous receiver domain BFW97_16050 SM00862 Transcriptional regulatory protein, C terminal BFW97_16055 SM00387 Histidine kinase-like ATPases BFW97_16095 SM00481 DNA polymerase alpha chain like domain BFW97_16125 SM00862 Transcriptional regulatory protein, C terminal BFW97_16135 SM00877 BFW97_16135 BFW97_16140 SM00877 BFW97_16140 BFW97_16145 SM00877 BFW97_16145 BFW97_16175 SM00877 BFW97_16175 BFW97_16250 SM01130 BFW97_16250 BFW97_16260 SM01134 BFW97_16260 BFW97_16280 SM01007 Class II Aldolase and Adducin N-terminal domain BFW97_16295 SM00382 ATPases associated with a variety of cellular activities BFW97_16375 SM00155 Phospholipase D. Active site motifs. BFW97_16395 SM00642 Alpha-amylase domain BFW97_16440 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW97_16460 SM00267 diguanylate cyclase BFW97_16475 SM00530 Helix-turn-helix XRE-family like proteins BFW97_16500 SM00919 Malic enzyme, NAD binding domain BFW97_16500 SM01274 BFW97_16500 BFW97_16505 SM00342 helix_turn_helix, arabinose operon control protein BFW97_16520 SM00267 diguanylate cyclase BFW97_16580 SM00382 ATPases associated with a variety of cellular activities BFW97_16615 SM00387 Histidine kinase-like ATPases BFW97_16615 SM00388 His Kinase A (phosphoacceptor) domain BFW97_16620 SM00448 cheY-homologous receiver domain BFW97_16620 SM00862 Transcriptional regulatory protein, C terminal BFW97_16640 SM00382 ATPases associated with a variety of cellular activities BFW97_16650 SM00342 helix_turn_helix, arabinose operon control protein BFW97_16660 SM00448 cheY-homologous receiver domain BFW97_16665 SM00387 Histidine kinase-like ATPases BFW97_16670 SM00919 Malic enzyme, NAD binding domain BFW97_16670 SM01274 BFW97_16670 BFW97_16680 SM00347 helix_turn_helix multiple antibiotic resistance protein BFW97_16695 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_16730 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BFW97_16730 SM00292 breast cancer carboxy-terminal domain BFW97_16730 SM00532 Ligase N family BFW97_16735 SM00771 ZipA, C-terminal domain (FtsZ-binding) BFW97_16770 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_16795 SM00642 Alpha-amylase domain BFW97_16805 SM00421 helix_turn_helix, Lux Regulon BFW97_16805 SM00448 cheY-homologous receiver domain BFW97_16830 SM00267 diguanylate cyclase BFW97_16835 SM00977 TilS substrate C-terminal domain BFW97_16850 SM00382 ATPases associated with a variety of cellular activities BFW97_16870 SM00849 Metallo-beta-lactamase superfamily BFW97_16905 SM00862 Transcriptional regulatory protein, C terminal BFW97_16915 SM00481 DNA polymerase alpha chain like domain BFW97_16945 SM00935 Outer membrane protein (OmpH-like) BFW97_16955 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BFW97_17000 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW97_17080 SM00028 Tetratricopeptide repeats BFW97_17085 SM00267 diguanylate cyclase BFW97_17095 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BFW97_17095 SM00475 5'-3' exonuclease BFW97_17100 SM01329 BFW97_17100 BFW97_17130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_17130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_17170 SM00900 BFW97_17170 BFW97_17275 SM00421 helix_turn_helix, Lux Regulon BFW97_17360 SM00422 helix_turn_helix, mercury resistance BFW97_17395 SM00830 Chorismate mutase type II BFW97_17435 SM00530 Helix-turn-helix XRE-family like proteins BFW97_17510 SM00487 DEAD-like helicases superfamily BFW97_17510 SM00490 helicase superfamily c-terminal domain BFW97_17530 SM00487 DEAD-like helicases superfamily BFW97_17530 SM00490 helicase superfamily c-terminal domain BFW97_17535 SM00487 DEAD-like helicases superfamily BFW97_17555 SM00342 helix_turn_helix, arabinose operon control protein BFW97_17595 SM00100 Cyclic nucleotide-monophosphate binding domain BFW97_17595 SM00419 helix_turn_helix, cAMP Regulatory protein BFW97_17610 SM00382 ATPases associated with a variety of cellular activities BFW97_17640 SM00100 Cyclic nucleotide-monophosphate binding domain BFW97_17640 SM00419 helix_turn_helix, cAMP Regulatory protein BFW97_17655 SM00382 ATPases associated with a variety of cellular activities BFW97_17705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_17705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_17735 SM00463 Small MutS-related domain BFW97_17780 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_17785 SM00448 cheY-homologous receiver domain BFW97_17795 SM00073 Histidine Phosphotransfer domain BFW97_17795 SM00260 Two component signalling adaptor domain BFW97_17795 SM00387 Histidine kinase-like ATPases BFW97_17795 SM01231 BFW97_17795 BFW97_17800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_17800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_17805 SM00260 Two component signalling adaptor domain BFW97_17810 SM00091 PAS domain BFW97_17810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_17810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_17815 SM00138 Methyltransferase, chemotaxis proteins BFW97_17825 SM00448 cheY-homologous receiver domain BFW97_17860 SM00052 Putative diguanylate phosphodiesterase BFW97_17875 SM01005 Alanine racemase, C-terminal domain BFW97_17880 SM00382 ATPases associated with a variety of cellular activities BFW97_17885 SM00978 BFW97_17885 BFW97_17890 SM00052 Putative diguanylate phosphodiesterase BFW97_17915 SM00382 ATPases associated with a variety of cellular activities BFW97_17915 SM00448 cheY-homologous receiver domain BFW97_17925 SM00320 WD40 repeats BFW97_17950 SM00260 Two component signalling adaptor domain BFW97_17950 SM00448 cheY-homologous receiver domain BFW97_17960 SM00267 diguanylate cyclase BFW97_17970 SM00984 UDP binding domain BFW97_18030 SM00100 Cyclic nucleotide-monophosphate binding domain BFW97_18030 SM00419 helix_turn_helix, cAMP Regulatory protein BFW97_18040 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BFW97_18040 SM00495 Chitin-binding domain type 3 BFW97_18050 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BFW97_18050 SM00495 Chitin-binding domain type 3 BFW97_18050 SM00636 BFW97_18050 BFW97_18055 SM00387 Histidine kinase-like ATPases BFW97_18055 SM00388 His Kinase A (phosphoacceptor) domain BFW97_18055 SM00448 cheY-homologous receiver domain BFW97_18065 SM00530 Helix-turn-helix XRE-family like proteins BFW97_18115 SM00382 ATPases associated with a variety of cellular activities BFW97_18135 SM01133 BFW97_18135 BFW97_18290 SM00507 HNH nucleases BFW97_18320 SM00382 ATPases associated with a variety of cellular activities BFW97_18330 SM00382 ATPases associated with a variety of cellular activities BFW97_18450 SM00382 ATPases associated with a variety of cellular activities BFW97_18465 SM00271 DnaJ molecular chaperone homology domain BFW97_18495 SM00650 Ribosomal RNA adenine dimethylases BFW97_18510 SM00530 Helix-turn-helix XRE-family like proteins BFW97_18520 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW97_18570 SM00244 prohibitin homologues BFW97_18575 SM00244 prohibitin homologues BFW97_18595 SM00853 MutL C terminal dimerisation domain BFW97_18595 SM01340 BFW97_18595 BFW97_18600 SM00257 Lysin motif BFW97_18600 SM00646 BFW97_18600 BFW97_18635 SM00382 ATPases associated with a variety of cellular activities BFW97_18635 SM00930 BFW97_18635 BFW97_18650 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BFW97_18655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_18655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_18660 SM00052 Putative diguanylate phosphodiesterase BFW97_18660 SM00448 cheY-homologous receiver domain BFW97_18665 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_18665 SM00073 Histidine Phosphotransfer domain BFW97_18665 SM00091 PAS domain BFW97_18665 SM00387 Histidine kinase-like ATPases BFW97_18665 SM00388 His Kinase A (phosphoacceptor) domain BFW97_18665 SM00448 cheY-homologous receiver domain BFW97_18675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW97_18680 SM00073 Histidine Phosphotransfer domain BFW97_18680 SM00091 PAS domain BFW97_18680 SM00387 Histidine kinase-like ATPases BFW97_18680 SM00388 His Kinase A (phosphoacceptor) domain BFW97_18680 SM00448 cheY-homologous receiver domain BFW97_18725 SM01130 BFW97_18725 BFW97_18775 SM00014 Acid phosphatase homologues BFW97_18785 SM00917 LeuA allosteric (dimerisation) domain BFW97_18790 SM01329 BFW97_18790 BFW97_18825 SM00382 ATPases associated with a variety of cellular activities BFW97_18830 SM00670 Large family of predicted nucleotide-binding domains BFW97_18870 SM00487 DEAD-like helicases superfamily BFW97_18870 SM00490 helicase superfamily c-terminal domain BFW97_18885 SM00052 Putative diguanylate phosphodiesterase BFW97_18885 SM00267 diguanylate cyclase BFW97_18900 SM00883 Chaperonin 10 Kd subunit BFW97_18975 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW97_18990 SM00422 helix_turn_helix, mercury resistance BFW97_18995 SM00798 AICARFT/IMPCHase bienzyme BFW97_18995 SM00851 MGS-like domain BFW97_19000 SM01209 BFW97_19000 BFW97_19000 SM01210 BFW97_19000 BFW97_19015 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BFW97_19015 SM00632 BFW97_19015 BFW97_19015 SM00642 Alpha-amylase domain BFW97_19020 SM01126 BFW97_19020 BFW97_19035 SM00400 zinc finger BFW97_19035 SM00493 BFW97_19035 BFW97_19035 SM00766 DNA primase DnaG DnaB-binding BFW97_19055 SM00257 Lysin motif BFW97_19095 SM01192 BFW97_19095 BFW97_19095 SM01193 BFW97_19095 BFW97_19110 SM00954 Region found in RelA / SpoT proteins BFW97_19120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_19120 SM00387 Histidine kinase-like ATPases BFW97_19120 SM00388 His Kinase A (phosphoacceptor) domain BFW97_19120 SM00448 cheY-homologous receiver domain BFW97_19130 SM00644 BFW97_19130 BFW97_19135 SM00420 helix_turn_helix, Deoxyribose operon repressor BFW97_19135 SM01134 BFW97_19135 BFW97_19200 SM00358 Double-stranded RNA binding motif BFW97_19200 SM00535 Ribonuclease III family BFW97_19300 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BFW97_19325 SM00287 Bacterial SH3 domain homologues BFW97_19335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_19335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_19385 SM00382 ATPases associated with a variety of cellular activities BFW97_19390 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_19395 SM00382 ATPases associated with a variety of cellular activities BFW97_19405 SM00448 cheY-homologous receiver domain BFW97_19405 SM00862 Transcriptional regulatory protein, C terminal BFW97_19410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_19410 SM00387 Histidine kinase-like ATPases BFW97_19410 SM00388 His Kinase A (phosphoacceptor) domain BFW97_19500 SM00487 DEAD-like helicases superfamily BFW97_19500 SM00490 helicase superfamily c-terminal domain BFW97_19510 SM00849 Metallo-beta-lactamase superfamily BFW97_19540 SM00347 helix_turn_helix multiple antibiotic resistance protein BFW97_19550 SM00347 helix_turn_helix multiple antibiotic resistance protein BFW97_19565 SM00028 Tetratricopeptide repeats BFW97_19565 SM00267 diguanylate cyclase BFW97_19570 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW97_19570 SM00091 PAS domain BFW97_19570 SM00267 diguanylate cyclase BFW97_19575 SM00327 von Willebrand factor (vWF) type A domain BFW97_19580 SM00382 ATPases associated with a variety of cellular activities BFW97_19625 SM00829 Enoylreductase BFW97_19690 SM00967 RNA 2'-O ribose methyltransferase substrate binding BFW97_19695 SM00316 Ribosomal protein S1-like RNA-binding domain BFW97_19695 SM00357 Cold shock protein domain BFW97_19695 SM00955 BFW97_19695 BFW97_19700 SM00267 diguanylate cyclase BFW97_19715 SM00938 Nitrogen regulatory protein P-II BFW97_19800 SM00904 Riboflavin kinase BFW97_19815 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BFW97_19845 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BFW97_19855 SM00927 DNA mismatch repair enzyme MutH BFW97_19885 SM00382 ATPases associated with a variety of cellular activities BFW97_19885 SM00962 SRP54-type protein, GTPase domain BFW97_19885 SM00963 SRP54-type protein, helical bundle domain BFW97_19895 SM01091 Transporter associated domain BFW97_19910 SM00671 Sel1-like repeats. BFW97_19930 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_19930 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BFW97_19935 SM00382 ATPases associated with a variety of cellular activities BFW97_19950 SM00382 ATPases associated with a variety of cellular activities BFW97_19965 SM00938 Nitrogen regulatory protein P-II BFW97_20030 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_20050 SM00487 DEAD-like helicases superfamily BFW97_20050 SM00490 helicase superfamily c-terminal domain BFW97_20130 SM00245 tail specific protease BFW97_20160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW97_20160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_20160 SM01049 BFW97_20160 BFW97_20175 SM00382 ATPases associated with a variety of cellular activities BFW97_20205 SM01266 BFW97_20205 BFW97_20250 SM00859 Semialdehyde dehydrogenase, NAD binding domain BFW97_20285 SM00342 helix_turn_helix, arabinose operon control protein BFW97_20320 SM00421 helix_turn_helix, Lux Regulon BFW97_20370 SM00382 ATPases associated with a variety of cellular activities BFW97_20385 SM00363 S4 RNA-binding domain BFW97_20400 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW97_20400 SM00895 BFW97_20400 BFW97_20435 SM00421 helix_turn_helix, Lux Regulon BFW97_20450 SM00357 Cold shock protein domain BFW97_20450 SM00955 BFW97_20450 BFW97_20530 SM00487 DEAD-like helicases superfamily BFW97_20530 SM00490 helicase superfamily c-terminal domain BFW97_20580 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BFW97_20590 SM00862 Transcriptional regulatory protein, C terminal BFW97_20730 SM00642 Alpha-amylase domain BFW97_20750 SM00344 helix_turn_helix ASNC type BFW97_20770 SM00852 Probable molybdopterin binding domain BFW97_20780 SM00382 ATPases associated with a variety of cellular activities BFW97_20810 SM00100 Cyclic nucleotide-monophosphate binding domain BFW97_20845 SM01219 BFW97_20845 BFW97_20955 SM00267 diguanylate cyclase BFW97_20980 SM00876 Biotin and Thiamin Synthesis associated domain BFW97_21010 SM00999 Aerolysin toxin BFW97_21025 SM00448 cheY-homologous receiver domain BFW97_21025 SM00862 Transcriptional regulatory protein, C terminal BFW97_21030 SM00388 His Kinase A (phosphoacceptor) domain BFW97_21045 SM01018 B12 binding domain BFW97_21120 SM00862 Transcriptional regulatory protein, C terminal BFW97_21165 SM00342 helix_turn_helix, arabinose operon control protein BFW97_21170 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW97_21170 SM00091 PAS domain BFW97_21180 SM00331 Sigma factor PP2C-like phosphatases BFW97_21180 SM00387 Histidine kinase-like ATPases BFW97_21185 SM00387 Histidine kinase-like ATPases BFW97_21185 SM00388 His Kinase A (phosphoacceptor) domain BFW97_21185 SM00448 cheY-homologous receiver domain BFW97_21190 SM00448 cheY-homologous receiver domain BFW97_21190 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW97_21250 SM00886 Stress responsive A/B Barrel Domain BFW97_21260 SM00316 Ribosomal protein S1-like RNA-binding domain BFW97_21330 SM00382 ATPases associated with a variety of cellular activities BFW97_21345 SM00965 Secretin and TonB N terminus short domain BFW97_21375 SM00052 Putative diguanylate phosphodiesterase BFW97_21375 SM00267 diguanylate cyclase BFW97_21380 SM00052 Putative diguanylate phosphodiesterase BFW97_21410 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW97_21410 SM00866 BFW97_21410 BFW97_21415 SM00947 Carbonic anhydrase BFW97_21430 SM00382 ATPases associated with a variety of cellular activities BFW97_21435 SM00382 ATPases associated with a variety of cellular activities BFW97_21435 SM00962 SRP54-type protein, GTPase domain BFW97_21435 SM00963 SRP54-type protein, helical bundle domain BFW97_21465 SM00155 Phospholipase D. Active site motifs. BFW97_21470 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_21555 SM00822 BFW97_21555 BFW97_21615 SM00662 RNA polymerases D BFW97_21620 SM00363 S4 RNA-binding domain BFW97_21620 SM01390 BFW97_21620 BFW97_21680 SM01374 BFW97_21680 BFW97_21700 SM00322 K homology RNA-binding domain BFW97_21715 SM01382 BFW97_21715 BFW97_21715 SM01383 BFW97_21715 BFW97_21735 SM01403 BFW97_21735 BFW97_21745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_21745 SM00387 Histidine kinase-like ATPases BFW97_21745 SM00388 His Kinase A (phosphoacceptor) domain BFW97_21750 SM00448 cheY-homologous receiver domain BFW97_21750 SM00862 Transcriptional regulatory protein, C terminal BFW97_21760 SM00316 Ribosomal protein S1-like RNA-binding domain BFW97_21760 SM00732 Likely ribonuclease with RNase H fold. BFW97_21805 SM00450 Rhodanese Homology Domain BFW97_21825 SM00354 helix_turn _helix lactose operon repressor BFW97_21850 SM00155 Phospholipase D. Active site motifs. BFW97_21855 SM00487 DEAD-like helicases superfamily BFW97_21855 SM00490 helicase superfamily c-terminal domain BFW97_21890 SM01230 BFW97_21890 BFW97_21900 SM00091 PAS domain BFW97_21900 SM00387 Histidine kinase-like ATPases BFW97_21900 SM00388 His Kinase A (phosphoacceptor) domain BFW97_21905 SM00382 ATPases associated with a variety of cellular activities BFW97_21905 SM00448 cheY-homologous receiver domain BFW97_21915 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW97_21965 SM01001 AIR carboxylase BFW97_21985 SM00257 Lysin motif BFW97_22040 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BFW97_22040 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BFW97_22060 SM00530 Helix-turn-helix XRE-family like proteins BFW97_22080 SM00342 helix_turn_helix, arabinose operon control protein BFW97_22090 SM00831 Cation transporter/ATPase, N-terminus BFW97_22150 SM01321 BFW97_22150 BFW97_22165 SM00382 ATPases associated with a variety of cellular activities BFW97_22185 SM00829 Enoylreductase BFW97_22230 SM01038 Beta galactosidase small chain BFW97_22235 SM00354 helix_turn _helix lactose operon repressor BFW97_22280 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BFW97_22280 SM00474 3'-5' exonuclease BFW97_22280 SM00475 5'-3' exonuclease BFW97_22280 SM00482 DNA polymerase A domain BFW97_22300 SM00971 Serine acetyltransferase, N-terminal BFW97_22310 SM00448 cheY-homologous receiver domain BFW97_22310 SM00862 Transcriptional regulatory protein, C terminal BFW97_22315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_22315 SM00387 Histidine kinase-like ATPases BFW97_22315 SM00388 His Kinase A (phosphoacceptor) domain BFW97_22345 SM00563 Phosphate acyltransferases BFW97_22370 SM00829 Enoylreductase BFW97_22375 SM00354 helix_turn _helix lactose operon repressor BFW97_22425 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BFW97_22425 SM01232 BFW97_22425 BFW97_22500 SM00881 CoA binding domain BFW97_22560 SM00448 cheY-homologous receiver domain BFW97_22560 SM00862 Transcriptional regulatory protein, C terminal BFW97_22565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW97_22565 SM00387 Histidine kinase-like ATPases BFW97_22565 SM00388 His Kinase A (phosphoacceptor) domain BFW97_22610 SM00836 DALR anticodon binding domain BFW97_22665 SM00849 Metallo-beta-lactamase superfamily BFW97_22670 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BFW97_22670 SM00382 ATPases associated with a variety of cellular activities BFW97_22675 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW97_22675 SM00866 BFW97_22675 BFW97_22690 SM00354 helix_turn _helix lactose operon repressor BFW97_22710 SM00382 ATPases associated with a variety of cellular activities BFW97_22715 SM00382 ATPases associated with a variety of cellular activities BFW97_22720 SM00342 helix_turn_helix, arabinose operon control protein BFW97_22730 SM00450 Rhodanese Homology Domain BFW97_22765 SM00357 Cold shock protein domain BFW97_22765 SM00382 ATPases associated with a variety of cellular activities BFW97_22765 SM00959 Rho termination factor, N-terminal domain BFW97_22775 SM00487 DEAD-like helicases superfamily BFW97_22775 SM00490 helicase superfamily c-terminal domain BFW97_22800 SM00052 Putative diguanylate phosphodiesterase BFW97_22800 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW97_22800 SM00091 PAS domain BFW97_22800 SM00267 diguanylate cyclase BFW97_22810 SM01004 Delta-aminolevulinic acid dehydratase BFW97_22920 SM00421 helix_turn_helix, Lux Regulon BFW97_22930 SM00420 helix_turn_helix, Deoxyribose operon repressor BFW97_22930 SM01134 BFW97_22930 BFW97_22935 SM00448 cheY-homologous receiver domain BFW97_22935 SM00862 Transcriptional regulatory protein, C terminal BFW97_22940 SM00387 Histidine kinase-like ATPases BFW97_22940 SM00388 His Kinase A (phosphoacceptor) domain BFW97_22965 SM00382 ATPases associated with a variety of cellular activities BFW97_23005 SM00470 ParB-like nuclease domain BFW97_23020 SM01228 BFW97_23020 BFW97_23035 SM00382 ATPases associated with a variety of cellular activities BFW97_23040 SM00382 ATPases associated with a variety of cellular activities BFW97_23075 SM00382 ATPases associated with a variety of cellular activities BFW97_23085 SM00062 Bacterial periplasmic substrate-binding proteins BFW97_23085 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins.