BFW41_00005 SM00382 ATPases associated with a variety of cellular activities BFW41_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain BFW41_00010 SM00480 DNA polymerase III beta subunit BFW41_00020 SM00387 Histidine kinase-like ATPases BFW41_00020 SM00433 TopoisomeraseII BFW41_00055 SM00342 helix_turn_helix, arabinose operon control protein BFW41_00065 SM00448 cheY-homologous receiver domain BFW41_00065 SM00862 Transcriptional regulatory protein, C terminal BFW41_00070 SM00387 Histidine kinase-like ATPases BFW41_00070 SM00388 His Kinase A (phosphoacceptor) domain BFW41_00095 SM00091 PAS domain BFW41_00095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_00095 SM00387 Histidine kinase-like ATPases BFW41_00135 SM00458 Ricin-type beta-trefoil BFW41_00155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_00155 SM00387 Histidine kinase-like ATPases BFW41_00155 SM00388 His Kinase A (phosphoacceptor) domain BFW41_00160 SM00448 cheY-homologous receiver domain BFW41_00185 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW41_00185 SM00954 Region found in RelA / SpoT proteins BFW41_00190 SM01409 BFW41_00190 BFW41_00195 SM00072 Guanylate kinase homologues. BFW41_00210 SM00267 diguanylate cyclase BFW41_00250 SM00028 Tetratricopeptide repeats BFW41_00250 SM00267 diguanylate cyclase BFW41_00300 SM00421 helix_turn_helix, Lux Regulon BFW41_00300 SM00448 cheY-homologous receiver domain BFW41_00330 SM00387 Histidine kinase-like ATPases BFW41_00335 SM00448 cheY-homologous receiver domain BFW41_00335 SM00850 LytTr DNA-binding domain BFW41_00350 SM01001 AIR carboxylase BFW41_00380 SM00360 RNA recognition motif BFW41_00430 SM00052 Putative diguanylate phosphodiesterase BFW41_00430 SM00267 diguanylate cyclase BFW41_00440 SM00829 Enoylreductase BFW41_00510 SM00422 helix_turn_helix, mercury resistance BFW41_00515 SM00267 diguanylate cyclase BFW41_00545 SM00382 ATPases associated with a variety of cellular activities BFW41_00550 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_00575 SM00563 Phosphate acyltransferases BFW41_00580 SM00563 Phosphate acyltransferases BFW41_00585 SM00382 ATPases associated with a variety of cellular activities BFW41_00625 SM00487 DEAD-like helicases superfamily BFW41_00625 SM00490 helicase superfamily c-terminal domain BFW41_00640 SM00919 Malic enzyme, NAD binding domain BFW41_00640 SM01274 BFW41_00640 BFW41_00650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_00650 SM00387 Histidine kinase-like ATPases BFW41_00650 SM00388 His Kinase A (phosphoacceptor) domain BFW41_00655 SM00448 cheY-homologous receiver domain BFW41_00655 SM00862 Transcriptional regulatory protein, C terminal BFW41_00715 SM00858 BFW41_00715 BFW41_00740 SM00822 BFW41_00740 BFW41_00800 SM00642 Alpha-amylase domain BFW41_00845 SM01230 BFW41_00845 BFW41_00865 SM00382 ATPases associated with a variety of cellular activities BFW41_00900 SM00341 Helicase and RNase D C-terminal BFW41_00900 SM00487 DEAD-like helicases superfamily BFW41_00900 SM00490 helicase superfamily c-terminal domain BFW41_00900 SM00956 BFW41_00900 BFW41_00930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_00930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_00930 SM01358 BFW41_00930 BFW41_00935 SM00924 MgtE intracellular N domain BFW41_00970 SM00382 ATPases associated with a variety of cellular activities BFW41_00970 SM01086 C-terminal, D2-small domain, of ClpB protein BFW41_00985 SM00836 DALR anticodon binding domain BFW41_00985 SM01016 Arginyl tRNA synthetase N terminal dom BFW41_00990 SM00464 Found in ATP-dependent protease La (LON) BFW41_01035 SM00354 helix_turn _helix lactose operon repressor BFW41_01040 SM01038 Beta galactosidase small chain BFW41_01050 SM00382 ATPases associated with a variety of cellular activities BFW41_01060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_01060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_01125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_01125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_01135 SM00342 helix_turn_helix, arabinose operon control protein BFW41_01145 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BFW41_01145 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BFW41_01180 SM00363 S4 RNA-binding domain BFW41_01190 SM00382 ATPases associated with a variety of cellular activities BFW41_01190 SM01086 C-terminal, D2-small domain, of ClpB protein BFW41_01195 SM00849 Metallo-beta-lactamase superfamily BFW41_01205 SM00344 helix_turn_helix ASNC type BFW41_01210 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_01220 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW41_01235 SM00387 Histidine kinase-like ATPases BFW41_01235 SM00388 His Kinase A (phosphoacceptor) domain BFW41_01245 SM00382 ATPases associated with a variety of cellular activities BFW41_01245 SM00448 cheY-homologous receiver domain BFW41_01275 SM00448 cheY-homologous receiver domain BFW41_01275 SM00862 Transcriptional regulatory protein, C terminal BFW41_01280 SM00387 Histidine kinase-like ATPases BFW41_01300 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BFW41_01300 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BFW41_01300 SM00493 BFW41_01300 BFW41_01315 SM00342 helix_turn_helix, arabinose operon control protein BFW41_01370 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BFW41_01370 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BFW41_01375 SM00649 Ribosomal protein L11/L12 BFW41_01400 SM00663 RNA polymerase I subunit A N-terminus BFW41_01440 SM00838 Elongation factor G C-terminus BFW41_01440 SM00889 Elongation factor G, domain IV BFW41_01495 SM01120 BFW41_01495 BFW41_01510 SM00091 PAS domain BFW41_01525 SM00822 BFW41_01525 BFW41_01535 SM00014 Acid phosphatase homologues BFW41_01545 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_01560 SM01060 BFW41_01560 BFW41_01570 SM00342 helix_turn_helix, arabinose operon control protein BFW41_01570 SM00871 Bacterial transcription activator, effector binding domain BFW41_01585 SM00267 diguanylate cyclase BFW41_01595 SM00382 ATPases associated with a variety of cellular activities BFW41_01620 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW41_01620 SM00866 BFW41_01620 BFW41_01625 SM00530 Helix-turn-helix XRE-family like proteins BFW41_01675 SM00342 helix_turn_helix, arabinose operon control protein BFW41_01680 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW41_01680 SM00091 PAS domain BFW41_01680 SM00267 diguanylate cyclase BFW41_01705 SM00448 cheY-homologous receiver domain BFW41_01705 SM00862 Transcriptional regulatory protein, C terminal BFW41_01710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_01710 SM00387 Histidine kinase-like ATPases BFW41_01710 SM00388 His Kinase A (phosphoacceptor) domain BFW41_01715 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_01715 SM00267 diguanylate cyclase BFW41_01730 SM00357 Cold shock protein domain BFW41_01745 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_01755 SM00421 helix_turn_helix, Lux Regulon BFW41_01765 SM00267 diguanylate cyclase BFW41_01775 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_01775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_01805 SM00530 Helix-turn-helix XRE-family like proteins BFW41_01885 SM00382 ATPases associated with a variety of cellular activities BFW41_01890 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW41_01910 SM00382 ATPases associated with a variety of cellular activities BFW41_01985 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BFW41_01990 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BFW41_02040 SM00749 bacterial OsmY and nodulation domain BFW41_02130 SM00842 Cell division protein FtsA BFW41_02135 SM00864 Tubulin/FtsZ family, GTPase domain BFW41_02135 SM00865 Tubulin/FtsZ family, C-terminal domain BFW41_02150 SM00957 SecA DEAD-like domain BFW41_02150 SM00958 SecA preprotein cross-linking domain BFW41_02205 SM00644 BFW41_02205 BFW41_02210 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW41_02210 SM00895 BFW41_02210 BFW41_02235 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_02240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_02240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_02255 SM00052 Putative diguanylate phosphodiesterase BFW41_02275 SM00833 Cobalamin synthesis protein cobW C-terminal domain BFW41_02295 SM00905 Dihydroneopterin aldolase BFW41_02300 SM01207 BFW41_02300 BFW41_02345 SM00260 Two component signalling adaptor domain BFW41_02345 SM00448 cheY-homologous receiver domain BFW41_02380 SM00851 MGS-like domain BFW41_02395 SM00870 BFW41_02395 BFW41_02410 SM00354 helix_turn _helix lactose operon repressor BFW41_02420 SM00642 Alpha-amylase domain BFW41_02425 SM01266 BFW41_02425 BFW41_02430 SM00344 helix_turn_helix ASNC type BFW41_02460 SM00382 ATPases associated with a variety of cellular activities BFW41_02530 SM01130 BFW41_02530 BFW41_02535 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BFW41_02535 SM00267 diguanylate cyclase BFW41_02575 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_02600 SM00478 endonuclease III BFW41_02600 SM00525 BFW41_02600 BFW41_02610 SM00382 ATPases associated with a variety of cellular activities BFW41_02615 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW41_02645 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW41_02655 SM00450 Rhodanese Homology Domain BFW41_02685 SM01118 BFW41_02685 BFW41_02755 SM00387 Histidine kinase-like ATPases BFW41_02755 SM00433 TopoisomeraseII BFW41_02760 SM00434 DNA Topoisomerase IV BFW41_02800 SM00271 DnaJ molecular chaperone homology domain BFW41_02825 SM00563 Phosphate acyltransferases BFW41_02860 SM00986 Uracil DNA glycosylase superfamily BFW41_02860 SM00987 UreE urease accessory protein, C-terminal domain BFW41_02880 SM00382 ATPases associated with a variety of cellular activities BFW41_02920 SM00347 helix_turn_helix multiple antibiotic resistance protein BFW41_02935 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BFW41_02935 SM00534 ATPase domain of DNA mismatch repair MUTS family BFW41_02945 SM00382 ATPases associated with a variety of cellular activities BFW41_02955 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BFW41_03010 SM01091 Transporter associated domain BFW41_03080 SM01133 BFW41_03080 BFW41_03085 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BFW41_03100 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BFW41_03100 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW41_03100 SM00091 PAS domain BFW41_03100 SM00267 diguanylate cyclase BFW41_03125 SM00382 ATPases associated with a variety of cellular activities BFW41_03140 SM00411 bacterial (prokaryotic) histone like domain BFW41_03185 SM00487 DEAD-like helicases superfamily BFW41_03185 SM00490 helicase superfamily c-terminal domain BFW41_03200 SM00382 ATPases associated with a variety of cellular activities BFW41_03220 SM01152 BFW41_03220 BFW41_03280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_03280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_03285 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BFW41_03290 SM00382 ATPases associated with a variety of cellular activities BFW41_03420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_03420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_03435 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BFW41_03445 SM00642 Alpha-amylase domain BFW41_03450 SM00642 Alpha-amylase domain BFW41_03470 SM00829 Enoylreductase BFW41_03480 SM00347 helix_turn_helix multiple antibiotic resistance protein BFW41_03495 SM00344 helix_turn_helix ASNC type BFW41_03560 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW41_03660 SM00382 ATPases associated with a variety of cellular activities BFW41_03665 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW41_03675 SM00244 prohibitin homologues BFW41_03710 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_03730 SM00382 ATPases associated with a variety of cellular activities BFW41_03785 SM00382 ATPases associated with a variety of cellular activities BFW41_03815 SM00450 Rhodanese Homology Domain BFW41_03860 SM00487 DEAD-like helicases superfamily BFW41_03860 SM00490 helicase superfamily c-terminal domain BFW41_03860 SM00847 Helicase associated domain (HA2) Add an annotation BFW41_03890 SM00448 cheY-homologous receiver domain BFW41_03890 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW41_03900 SM00014 Acid phosphatase homologues BFW41_03995 SM00382 ATPases associated with a variety of cellular activities BFW41_04005 SM00448 cheY-homologous receiver domain BFW41_04020 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BFW41_04105 SM00327 von Willebrand factor (vWF) type A domain BFW41_04110 SM00260 Two component signalling adaptor domain BFW41_04110 SM00448 cheY-homologous receiver domain BFW41_04120 SM00382 ATPases associated with a variety of cellular activities BFW41_04135 SM00052 Putative diguanylate phosphodiesterase BFW41_04165 SM00450 Rhodanese Homology Domain BFW41_04175 SM00382 ATPases associated with a variety of cellular activities BFW41_04205 SM00052 Putative diguanylate phosphodiesterase BFW41_04205 SM00091 PAS domain BFW41_04205 SM00267 diguanylate cyclase BFW41_04215 SM00342 helix_turn_helix, arabinose operon control protein BFW41_04255 SM00479 BFW41_04255 BFW41_04295 SM00357 Cold shock protein domain BFW41_04305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_04305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_04345 SM00495 Chitin-binding domain type 3 BFW41_04345 SM00636 BFW41_04345 BFW41_04350 SM00028 Tetratricopeptide repeats BFW41_04400 SM00382 ATPases associated with a variety of cellular activities BFW41_04405 SM00382 ATPases associated with a variety of cellular activities BFW41_04435 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BFW41_04470 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BFW41_04480 SM01012 BFW41_04480 BFW41_04495 SM00382 ATPases associated with a variety of cellular activities BFW41_04520 SM01057 Eukaryotic-type carbonic anhydrase BFW41_04530 SM00477 DNA/RNA non-specific endonuclease BFW41_04530 SM00892 DNA/RNA non-specific endonuclease BFW41_04555 SM00563 Phosphate acyltransferases BFW41_04615 SM00825 Beta-ketoacyl synthase BFW41_04625 SM00822 BFW41_04625 BFW41_04630 SM00825 Beta-ketoacyl synthase BFW41_04640 SM00852 Probable molybdopterin binding domain BFW41_04675 SM00382 ATPases associated with a variety of cellular activities BFW41_04715 SM00937 BFW41_04715 BFW41_04720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_04720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_04730 SM00870 BFW41_04730 BFW41_04740 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BFW41_04775 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_04780 SM01266 BFW41_04780 BFW41_04790 SM00829 Enoylreductase BFW41_04815 SM00878 Biotin carboxylase C-terminal domain BFW41_04840 SM00052 Putative diguanylate phosphodiesterase BFW41_04840 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW41_04840 SM00091 PAS domain BFW41_04840 SM00267 diguanylate cyclase BFW41_04905 SM00020 Trypsin-like serine protease BFW41_04930 SM00382 ATPases associated with a variety of cellular activities BFW41_04950 SM00861 Transketolase, pyrimidine binding domain BFW41_04985 SM01103 BFW41_04985 BFW41_04995 SM00382 ATPases associated with a variety of cellular activities BFW41_05035 SM00316 Ribosomal protein S1-like RNA-binding domain BFW41_05055 SM01387 BFW41_05055 BFW41_05060 SM00316 Ribosomal protein S1-like RNA-binding domain BFW41_05060 SM00322 K homology RNA-binding domain BFW41_05070 SM00267 diguanylate cyclase BFW41_05100 SM00448 cheY-homologous receiver domain BFW41_05100 SM00850 LytTr DNA-binding domain BFW41_05105 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BFW41_05110 SM00421 helix_turn_helix, Lux Regulon BFW41_05110 SM00448 cheY-homologous receiver domain BFW41_05115 SM00387 Histidine kinase-like ATPases BFW41_05115 SM00388 His Kinase A (phosphoacceptor) domain BFW41_05130 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BFW41_05190 SM00267 diguanylate cyclase BFW41_05210 SM00422 helix_turn_helix, mercury resistance BFW41_05240 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW41_05255 SM00936 Penicillin-binding protein 5, C-terminal domain BFW41_05325 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW41_05325 SM01091 Transporter associated domain BFW41_05340 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW41_05355 SM00357 Cold shock protein domain BFW41_05360 SM00267 diguanylate cyclase BFW41_05385 SM00267 diguanylate cyclase BFW41_05410 SM00841 Elongation factor P, C-terminal BFW41_05410 SM01185 BFW41_05410 BFW41_05420 SM01240 BFW41_05420 BFW41_05430 SM00387 Histidine kinase-like ATPases BFW41_05430 SM00388 His Kinase A (phosphoacceptor) domain BFW41_05435 SM00448 cheY-homologous receiver domain BFW41_05435 SM00862 Transcriptional regulatory protein, C terminal BFW41_05445 SM00822 BFW41_05445 BFW41_05450 SM01236 BFW41_05450 BFW41_05510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_05510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_05550 SM00849 Metallo-beta-lactamase superfamily BFW41_05560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_05560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_05575 SM00842 Cell division protein FtsA BFW41_05595 SM00965 Secretin and TonB N terminus short domain BFW41_05660 SM01150 BFW41_05660 BFW41_05685 SM00890 Domain of unknown function BFW41_05695 SM00642 Alpha-amylase domain BFW41_05705 SM01022 BFW41_05705 BFW41_05710 SM00100 Cyclic nucleotide-monophosphate binding domain BFW41_05785 SM01400 BFW41_05785 BFW41_05810 SM00937 BFW41_05810 BFW41_05845 SM00986 Uracil DNA glycosylase superfamily BFW41_05845 SM00987 UreE urease accessory protein, C-terminal domain BFW41_05870 SM00460 Transglutaminase/protease-like homologues BFW41_05910 SM00732 Likely ribonuclease with RNase H fold. BFW41_05920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_05940 SM00731 SprT homologues. BFW41_05950 SM00861 Transketolase, pyrimidine binding domain BFW41_05980 SM00363 S4 RNA-binding domain BFW41_05990 SM00342 helix_turn_helix, arabinose operon control protein BFW41_06000 SM00788 Adenylosuccinate synthetase BFW41_06045 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BFW41_06045 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BFW41_06045 SM00493 BFW41_06045 BFW41_06055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_06075 SM00382 ATPases associated with a variety of cellular activities BFW41_06080 SM00382 ATPases associated with a variety of cellular activities BFW41_06100 SM00091 PAS domain BFW41_06100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_06100 SM00387 Histidine kinase-like ATPases BFW41_06100 SM00388 His Kinase A (phosphoacceptor) domain BFW41_06100 SM00448 cheY-homologous receiver domain BFW41_06150 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW41_06150 SM00091 PAS domain BFW41_06150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_06160 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW41_06170 SM00852 Probable molybdopterin binding domain BFW41_06180 SM00382 ATPases associated with a variety of cellular activities BFW41_06195 SM00382 ATPases associated with a variety of cellular activities BFW41_06195 SM00448 cheY-homologous receiver domain BFW41_06200 SM00387 Histidine kinase-like ATPases BFW41_06200 SM00388 His Kinase A (phosphoacceptor) domain BFW41_06245 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BFW41_06260 SM00387 Histidine kinase-like ATPases BFW41_06260 SM00448 cheY-homologous receiver domain BFW41_06265 SM00919 Malic enzyme, NAD binding domain BFW41_06265 SM01274 BFW41_06265 BFW41_06350 SM00267 diguanylate cyclase BFW41_06375 SM00382 ATPases associated with a variety of cellular activities BFW41_06410 SM00382 ATPases associated with a variety of cellular activities BFW41_06415 SM00382 ATPases associated with a variety of cellular activities BFW41_06430 SM00448 cheY-homologous receiver domain BFW41_06430 SM00862 Transcriptional regulatory protein, C terminal BFW41_06495 SM00382 ATPases associated with a variety of cellular activities BFW41_06520 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_06520 SM00387 Histidine kinase-like ATPases BFW41_06520 SM00388 His Kinase A (phosphoacceptor) domain BFW41_06520 SM00448 cheY-homologous receiver domain BFW41_06520 SM00918 Ligated ion channel L-glutamate- and glycine-binding site BFW41_06570 SM00530 Helix-turn-helix XRE-family like proteins BFW41_06585 SM00862 Transcriptional regulatory protein, C terminal BFW41_06605 SM00528 Domain in histone-like proteins of HNS family BFW41_06625 SM00382 ATPases associated with a variety of cellular activities BFW41_06640 SM01131 BFW41_06640 BFW41_06665 SM00271 DnaJ molecular chaperone homology domain BFW41_06685 SM00640 Glycosyl hydrolases family 32 BFW41_06690 SM00354 helix_turn _helix lactose operon repressor BFW41_06710 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BFW41_06735 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW41_06735 SM00091 PAS domain BFW41_06735 SM00267 diguanylate cyclase BFW41_06775 SM01126 BFW41_06775 BFW41_06800 SM00028 Tetratricopeptide repeats BFW41_06800 SM00448 cheY-homologous receiver domain BFW41_06895 SM00382 ATPases associated with a variety of cellular activities BFW41_06900 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_06920 SM00247 Beta/gamma crystallins BFW41_07010 SM00481 DNA polymerase alpha chain like domain BFW41_07030 SM00363 S4 RNA-binding domain BFW41_07150 SM00487 DEAD-like helicases superfamily BFW41_07150 SM00490 helicase superfamily c-terminal domain BFW41_07175 SM00861 Transketolase, pyrimidine binding domain BFW41_07185 SM00357 Cold shock protein domain BFW41_07220 SM00420 helix_turn_helix, Deoxyribose operon repressor BFW41_07220 SM01134 BFW41_07220 BFW41_07245 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW41_07250 SM00363 S4 RNA-binding domain BFW41_07280 SM00858 BFW41_07280 BFW41_07285 SM00260 Two component signalling adaptor domain BFW41_07285 SM00448 cheY-homologous receiver domain BFW41_07290 SM00138 Methyltransferase, chemotaxis proteins BFW41_07335 SM00047 Lysozyme subfamily 2 BFW41_07350 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW41_07350 SM00924 MgtE intracellular N domain BFW41_07375 SM00382 ATPases associated with a variety of cellular activities BFW41_07380 SM00091 PAS domain BFW41_07380 SM00387 Histidine kinase-like ATPases BFW41_07380 SM00388 His Kinase A (phosphoacceptor) domain BFW41_07385 SM00382 ATPases associated with a variety of cellular activities BFW41_07385 SM00448 cheY-homologous receiver domain BFW41_07450 SM00382 ATPases associated with a variety of cellular activities BFW41_07460 SM01091 Transporter associated domain BFW41_07490 SM00382 ATPases associated with a variety of cellular activities BFW41_07500 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_07500 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BFW41_07505 SM00267 diguanylate cyclase BFW41_07515 SM00387 Histidine kinase-like ATPases BFW41_07520 SM00421 helix_turn_helix, Lux Regulon BFW41_07520 SM00448 cheY-homologous receiver domain BFW41_07545 SM00098 Alkaline phosphatase homologues BFW41_07550 SM00098 Alkaline phosphatase homologues BFW41_07575 SM00491 BFW41_07575 BFW41_07610 SM00849 Metallo-beta-lactamase superfamily BFW41_07615 SM00382 ATPases associated with a variety of cellular activities BFW41_07635 SM00421 helix_turn_helix, Lux Regulon BFW41_07635 SM00448 cheY-homologous receiver domain BFW41_07640 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BFW41_07640 SM00465 GIY-YIG type nucleases (URI domain) BFW41_07695 SM00487 DEAD-like helicases superfamily BFW41_07695 SM00490 helicase superfamily c-terminal domain BFW41_07795 SM00840 BFW41_07795 BFW41_07810 SM00267 diguanylate cyclase BFW41_07815 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_07820 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_07850 SM00899 BFW41_07850 BFW41_07875 SM00382 ATPases associated with a variety of cellular activities BFW41_07885 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_07895 SM00382 ATPases associated with a variety of cellular activities BFW41_07940 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BFW41_07945 SM00851 MGS-like domain BFW41_07945 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BFW41_07950 SM00917 LeuA allosteric (dimerisation) domain BFW41_07975 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BFW41_07990 SM00487 DEAD-like helicases superfamily BFW41_07990 SM00490 helicase superfamily c-terminal domain BFW41_08000 SM01351 BFW41_08000 BFW41_08015 SM00422 helix_turn_helix, mercury resistance BFW41_08030 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_08040 SM00382 ATPases associated with a variety of cellular activities BFW41_08060 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW41_08065 SM00382 ATPases associated with a variety of cellular activities BFW41_08085 SM00052 Putative diguanylate phosphodiesterase BFW41_08085 SM00267 diguanylate cyclase BFW41_08095 SM00327 von Willebrand factor (vWF) type A domain BFW41_08130 SM00342 helix_turn_helix, arabinose operon control protein BFW41_08135 SM01217 BFW41_08135 BFW41_08175 SM00014 Acid phosphatase homologues BFW41_08185 SM00859 Semialdehyde dehydrogenase, NAD binding domain BFW41_08265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_08270 SM00267 diguanylate cyclase BFW41_08345 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW41_08345 SM01091 Transporter associated domain BFW41_08370 SM00487 DEAD-like helicases superfamily BFW41_08370 SM00490 helicase superfamily c-terminal domain BFW41_08380 SM00479 BFW41_08380 BFW41_08385 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_08400 SM00478 endonuclease III BFW41_08400 SM00525 BFW41_08400 BFW41_08410 SM00900 BFW41_08410 BFW41_08445 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW41_08445 SM00091 PAS domain BFW41_08445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_08480 SM00487 DEAD-like helicases superfamily BFW41_08480 SM00490 helicase superfamily c-terminal domain BFW41_08500 SM00448 cheY-homologous receiver domain BFW41_08500 SM00850 LytTr DNA-binding domain BFW41_08505 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BFW41_08510 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW41_08545 SM00382 ATPases associated with a variety of cellular activities BFW41_08550 SM00382 ATPases associated with a variety of cellular activities BFW41_08560 SM01005 Alanine racemase, C-terminal domain BFW41_08690 SM00530 Helix-turn-helix XRE-family like proteins BFW41_08915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_08915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_09165 SM00382 ATPases associated with a variety of cellular activities BFW41_09235 SM00530 Helix-turn-helix XRE-family like proteins BFW41_09240 SM00873 B3/4 domain BFW41_09245 SM01005 Alanine racemase, C-terminal domain BFW41_09250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_09250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_09255 SM00052 Putative diguanylate phosphodiesterase BFW41_09255 SM00448 cheY-homologous receiver domain BFW41_09260 SM00448 cheY-homologous receiver domain BFW41_09265 SM00138 Methyltransferase, chemotaxis proteins BFW41_09270 SM00260 Two component signalling adaptor domain BFW41_09275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_09280 SM00073 Histidine Phosphotransfer domain BFW41_09280 SM00260 Two component signalling adaptor domain BFW41_09280 SM00387 Histidine kinase-like ATPases BFW41_09280 SM01231 BFW41_09280 BFW41_09290 SM00448 cheY-homologous receiver domain BFW41_09340 SM00382 ATPases associated with a variety of cellular activities BFW41_09345 SM00382 ATPases associated with a variety of cellular activities BFW41_09440 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BFW41_09455 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BFW41_09455 SM00382 ATPases associated with a variety of cellular activities BFW41_09465 SM00493 BFW41_09465 BFW41_09470 SM00387 Histidine kinase-like ATPases BFW41_09505 SM00052 Putative diguanylate phosphodiesterase BFW41_09505 SM00267 diguanylate cyclase BFW41_09540 SM00823 Phosphopantetheine attachment site BFW41_09545 SM00822 BFW41_09545 BFW41_09550 SM00823 Phosphopantetheine attachment site BFW41_09570 SM00382 ATPases associated with a variety of cellular activities BFW41_09615 SM00893 Electron transfer flavoprotein domain BFW41_09620 SM00893 Electron transfer flavoprotein domain BFW41_09640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_09640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_09645 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW41_09680 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW41_09680 SM01240 BFW41_09680 BFW41_09775 SM00422 helix_turn_helix, mercury resistance BFW41_09800 SM00422 helix_turn_helix, mercury resistance BFW41_09825 SM00857 Resolvase, N terminal domain BFW41_09855 SM00342 helix_turn_helix, arabinose operon control protein BFW41_09865 SM00364 Leucine-rich repeats, bacterial type BFW41_09865 SM00369 Leucine-rich repeats, typical (most populated) subfamily BFW41_09880 SM00855 Phosphoglycerate mutase family BFW41_09905 SM00487 DEAD-like helicases superfamily BFW41_09905 SM00490 helicase superfamily c-terminal domain BFW41_09905 SM00982 BFW41_09905 BFW41_09905 SM01058 CarD-like/TRCF domain BFW41_09920 SM00382 ATPases associated with a variety of cellular activities BFW41_09930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW41_09955 SM00382 ATPases associated with a variety of cellular activities BFW41_09955 SM00994 ClpX C4-type zinc finger BFW41_09955 SM01086 C-terminal, D2-small domain, of ClpB protein BFW41_09960 SM00382 ATPases associated with a variety of cellular activities BFW41_09960 SM00464 Found in ATP-dependent protease La (LON) BFW41_09975 SM00382 ATPases associated with a variety of cellular activities BFW41_09990 SM00479 BFW41_09990 BFW41_09995 SM00100 Cyclic nucleotide-monophosphate binding domain BFW41_09995 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW41_10045 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_10050 SM00422 helix_turn_helix, mercury resistance BFW41_10060 SM00878 Biotin carboxylase C-terminal domain BFW41_10060 SM01209 BFW41_10060 BFW41_10105 SM00822 BFW41_10105 BFW41_10135 SM00052 Putative diguanylate phosphodiesterase BFW41_10150 SM00052 Putative diguanylate phosphodiesterase BFW41_10150 SM00267 diguanylate cyclase BFW41_10160 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW41_10165 SM00822 BFW41_10165 BFW41_10175 SM00518 AP endonuclease family 2 BFW41_10205 SM00090 RIO-like kinase BFW41_10215 SM00267 diguanylate cyclase BFW41_10225 SM00486 DNA polymerase type-B family BFW41_10305 SM00347 helix_turn_helix multiple antibiotic resistance protein BFW41_10385 SM00422 helix_turn_helix, mercury resistance BFW41_10395 SM00052 Putative diguanylate phosphodiesterase BFW41_10425 SM00028 Tetratricopeptide repeats BFW41_10430 SM00327 von Willebrand factor (vWF) type A domain BFW41_10465 SM01322 BFW41_10465 BFW41_10475 SM00382 ATPases associated with a variety of cellular activities BFW41_10535 SM01092 CO dehydrogenase flavoprotein C-terminal domain BFW41_10540 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BFW41_10560 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BFW41_10565 SM01092 CO dehydrogenase flavoprotein C-terminal domain BFW41_10575 SM00237 Domains in Na-Ca exchangers and integrin-beta4 BFW41_10615 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW41_10615 SM00091 PAS domain BFW41_10615 SM00387 Histidine kinase-like ATPases BFW41_10615 SM00388 His Kinase A (phosphoacceptor) domain BFW41_10615 SM00448 cheY-homologous receiver domain BFW41_10620 SM00091 PAS domain BFW41_10625 SM00448 cheY-homologous receiver domain BFW41_10625 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW41_10665 SM00491 BFW41_10665 BFW41_10690 SM00341 Helicase and RNase D C-terminal BFW41_10690 SM00474 3'-5' exonuclease BFW41_10695 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_10720 SM00382 ATPases associated with a variety of cellular activities BFW41_10735 SM00421 helix_turn_helix, Lux Regulon BFW41_10740 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW41_10745 SM00382 ATPases associated with a variety of cellular activities BFW41_10745 SM00487 DEAD-like helicases superfamily BFW41_10745 SM00490 helicase superfamily c-terminal domain BFW41_10745 SM00847 Helicase associated domain (HA2) Add an annotation BFW41_10760 SM00387 Histidine kinase-like ATPases BFW41_10760 SM00388 His Kinase A (phosphoacceptor) domain BFW41_10760 SM00448 cheY-homologous receiver domain BFW41_10765 SM00448 cheY-homologous receiver domain BFW41_10765 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW41_10770 SM00849 Metallo-beta-lactamase superfamily BFW41_10775 SM00450 Rhodanese Homology Domain BFW41_10795 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BFW41_10805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_10845 SM00316 Ribosomal protein S1-like RNA-binding domain BFW41_10850 SM00363 S4 RNA-binding domain BFW41_10900 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BFW41_10905 SM00822 BFW41_10905 BFW41_10915 SM00825 Beta-ketoacyl synthase BFW41_10935 SM00382 ATPases associated with a variety of cellular activities BFW41_11025 SM00822 BFW41_11025 BFW41_11060 SM00382 ATPases associated with a variety of cellular activities BFW41_11070 SM00981 BFW41_11070 BFW41_11105 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BFW41_11105 SM00245 tail specific protease BFW41_11110 SM00945 ProQ/FINO family BFW41_11165 SM00100 Cyclic nucleotide-monophosphate binding domain BFW41_11165 SM00419 helix_turn_helix, cAMP Regulatory protein BFW41_11200 SM00382 ATPases associated with a variety of cellular activities BFW41_11220 SM00354 helix_turn _helix lactose operon repressor BFW41_11225 SM00267 diguanylate cyclase BFW41_11250 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_11250 SM00387 Histidine kinase-like ATPases BFW41_11250 SM00388 His Kinase A (phosphoacceptor) domain BFW41_11250 SM00448 cheY-homologous receiver domain BFW41_11255 SM00411 bacterial (prokaryotic) histone like domain BFW41_11260 SM00873 B3/4 domain BFW41_11260 SM00874 tRNA synthetase B5 domain BFW41_11260 SM00896 Ferredoxin-fold anticodon binding domain BFW41_11285 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BFW41_11290 SM00671 Sel1-like repeats. BFW41_11300 SM00434 DNA Topoisomerase IV BFW41_11330 SM00925 MltA specific insert domain BFW41_11370 SM00354 helix_turn _helix lactose operon repressor BFW41_11395 SM00354 helix_turn _helix lactose operon repressor BFW41_11410 SM00953 BFW41_11410 BFW41_11415 SM00487 DEAD-like helicases superfamily BFW41_11415 SM00490 helicase superfamily c-terminal domain BFW41_11435 SM00463 Small MutS-related domain BFW41_11445 SM00091 PAS domain BFW41_11445 SM00267 diguanylate cyclase BFW41_11450 SM00855 Phosphoglycerate mutase family BFW41_11475 SM00782 PhnA Zinc-Ribbon BFW41_11625 SM00642 Alpha-amylase domain BFW41_11640 SM00342 helix_turn_helix, arabinose operon control protein BFW41_11660 SM01144 BFW41_11660 BFW41_11675 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BFW41_11685 SM00487 DEAD-like helicases superfamily BFW41_11685 SM00490 helicase superfamily c-terminal domain BFW41_11710 SM01118 BFW41_11710 BFW41_11775 SM00382 ATPases associated with a variety of cellular activities BFW41_11780 SM00382 ATPases associated with a variety of cellular activities BFW41_11785 SM00387 Histidine kinase-like ATPases BFW41_11785 SM00388 His Kinase A (phosphoacceptor) domain BFW41_11785 SM00448 cheY-homologous receiver domain BFW41_11850 SM00487 DEAD-like helicases superfamily BFW41_11850 SM00490 helicase superfamily c-terminal domain BFW41_11855 SM00763 PrkA AAA domain BFW41_11870 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW41_11895 SM00487 DEAD-like helicases superfamily BFW41_11895 SM00490 helicase superfamily c-terminal domain BFW41_11910 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_11930 SM00448 cheY-homologous receiver domain BFW41_11935 SM00091 PAS domain BFW41_11935 SM00387 Histidine kinase-like ATPases BFW41_11945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_11945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_11945 SM01049 BFW41_11945 BFW41_12045 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW41_12055 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_12080 SM00342 helix_turn_helix, arabinose operon control protein BFW41_12080 SM00871 Bacterial transcription activator, effector binding domain BFW41_12085 SM00822 BFW41_12085 BFW41_12115 SM00859 Semialdehyde dehydrogenase, NAD binding domain BFW41_12155 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW41_12155 SM00866 BFW41_12155 BFW41_12165 SM00382 ATPases associated with a variety of cellular activities BFW41_12190 SM00881 CoA binding domain BFW41_12205 SM00861 Transketolase, pyrimidine binding domain BFW41_12245 SM00825 Beta-ketoacyl synthase BFW41_12310 SM00342 helix_turn_helix, arabinose operon control protein BFW41_12320 SM00382 ATPases associated with a variety of cellular activities BFW41_12335 SM01007 Class II Aldolase and Adducin N-terminal domain BFW41_12385 SM00382 ATPases associated with a variety of cellular activities BFW41_12390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_12390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_12410 SM00354 helix_turn _helix lactose operon repressor BFW41_12445 SM00487 DEAD-like helicases superfamily BFW41_12450 SM00506 Appr-1"-p processing enzyme BFW41_12545 SM00267 diguanylate cyclase BFW41_12545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_12555 SM00091 PAS domain BFW41_12555 SM00382 ATPases associated with a variety of cellular activities BFW41_12600 SM00382 ATPases associated with a variety of cellular activities BFW41_12620 SM00382 ATPases associated with a variety of cellular activities BFW41_12625 SM00382 ATPases associated with a variety of cellular activities BFW41_12655 SM00382 ATPases associated with a variety of cellular activities BFW41_12665 SM00843 BFW41_12665 BFW41_12670 SM00344 helix_turn_helix ASNC type BFW41_12680 SM00267 diguanylate cyclase BFW41_12680 SM00448 cheY-homologous receiver domain BFW41_12700 SM00316 Ribosomal protein S1-like RNA-binding domain BFW41_12705 SM00382 ATPases associated with a variety of cellular activities BFW41_12705 SM01086 C-terminal, D2-small domain, of ClpB protein BFW41_12715 SM00357 Cold shock protein domain BFW41_12740 SM00047 Lysozyme subfamily 2 BFW41_12775 SM00382 ATPases associated with a variety of cellular activities BFW41_12780 SM00382 ATPases associated with a variety of cellular activities BFW41_12780 SM01086 C-terminal, D2-small domain, of ClpB protein BFW41_12830 SM00671 Sel1-like repeats. BFW41_12870 SM01154 BFW41_12870 BFW41_12885 SM00528 Domain in histone-like proteins of HNS family BFW41_12910 SM01144 BFW41_12910 BFW41_12920 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BFW41_12925 SM00028 Tetratricopeptide repeats BFW41_12935 SM00411 bacterial (prokaryotic) histone like domain BFW41_12940 SM00316 Ribosomal protein S1-like RNA-binding domain BFW41_12990 SM00052 Putative diguanylate phosphodiesterase BFW41_12990 SM00267 diguanylate cyclase BFW41_13005 SM00448 cheY-homologous receiver domain BFW41_13010 SM00091 PAS domain BFW41_13035 SM00360 RNA recognition motif BFW41_13100 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BFW41_13105 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BFW41_13105 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BFW41_13145 SM00897 FIST N domain BFW41_13145 SM01204 BFW41_13145 BFW41_13150 SM00091 PAS domain BFW41_13150 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW41_13155 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW41_13160 SM01211 BFW41_13160 BFW41_13165 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_13170 SM01126 BFW41_13170 BFW41_13185 SM00564 beta-propeller repeat BFW41_13205 SM00530 Helix-turn-helix XRE-family like proteins BFW41_13210 SM00028 Tetratricopeptide repeats BFW41_13220 SM00562 BFW41_13220 BFW41_13245 SM00271 DnaJ molecular chaperone homology domain BFW41_13295 SM00028 Tetratricopeptide repeats BFW41_13300 SM00450 Rhodanese Homology Domain BFW41_13315 SM01323 BFW41_13315 BFW41_13330 SM00116 Domain in cystathionine beta-synthase and other proteins. BFW41_13370 SM00382 ATPases associated with a variety of cellular activities BFW41_13380 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BFW41_13385 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BFW41_13430 SM00382 ATPases associated with a variety of cellular activities BFW41_13530 SM01126 BFW41_13530 BFW41_13535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_13535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_13610 SM00981 BFW41_13610 BFW41_13625 SM01359 BFW41_13625 BFW41_13625 SM01360 BFW41_13625 BFW41_13630 SM00450 Rhodanese Homology Domain BFW41_13635 SM00052 Putative diguanylate phosphodiesterase BFW41_13635 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW41_13635 SM00091 PAS domain BFW41_13635 SM00267 diguanylate cyclase BFW41_13675 SM00984 UDP binding domain BFW41_13710 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_13710 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BFW41_13715 SM00382 ATPases associated with a variety of cellular activities BFW41_13785 SM00382 ATPases associated with a variety of cellular activities BFW41_13865 SM00830 Chorismate mutase type II BFW41_13885 SM00420 helix_turn_helix, Deoxyribose operon repressor BFW41_13885 SM01134 BFW41_13885 BFW41_13955 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW41_13990 SM00871 Bacterial transcription activator, effector binding domain BFW41_14020 SM00363 S4 RNA-binding domain BFW41_14025 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BFW41_14045 SM00507 HNH nucleases BFW41_14050 SM00855 Phosphoglycerate mutase family BFW41_14075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_14075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_14105 SM00563 Phosphate acyltransferases BFW41_14115 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BFW41_14125 SM00867 YceI-like domain BFW41_14145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_14145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_14155 SM00852 Probable molybdopterin binding domain BFW41_14170 SM00382 ATPases associated with a variety of cellular activities BFW41_14200 SM00852 Probable molybdopterin binding domain BFW41_14225 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BFW41_14240 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW41_14245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_14245 SM00387 Histidine kinase-like ATPases BFW41_14250 SM00421 helix_turn_helix, Lux Regulon BFW41_14250 SM00448 cheY-homologous receiver domain BFW41_14255 SM00464 Found in ATP-dependent protease La (LON) BFW41_14260 SM00387 Histidine kinase-like ATPases BFW41_14260 SM00388 His Kinase A (phosphoacceptor) domain BFW41_14260 SM00448 cheY-homologous receiver domain BFW41_14265 SM00897 FIST N domain BFW41_14265 SM01204 BFW41_14265 BFW41_14275 SM00073 Histidine Phosphotransfer domain BFW41_14295 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW41_14305 SM00479 BFW41_14305 BFW41_14320 SM00849 Metallo-beta-lactamase superfamily BFW41_14325 SM00257 Lysin motif BFW41_14350 SM00354 helix_turn _helix lactose operon repressor BFW41_14360 SM00052 Putative diguanylate phosphodiesterase BFW41_14360 SM00267 diguanylate cyclase BFW41_14435 SM00382 ATPases associated with a variety of cellular activities BFW41_14460 SM00347 helix_turn_helix multiple antibiotic resistance protein BFW41_14515 SM01081 Putative carbohydrate binding domain BFW41_14595 SM00458 Ricin-type beta-trefoil BFW41_14670 SM00890 Domain of unknown function BFW41_14685 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_14710 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW41_14710 SM00876 Biotin and Thiamin Synthesis associated domain BFW41_14720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_14780 SM01091 Transporter associated domain BFW41_14805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_14805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_14900 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW41_14900 SM00091 PAS domain BFW41_14900 SM00267 diguanylate cyclase BFW41_14900 SM01079 BFW41_14900 BFW41_14975 SM00487 DEAD-like helicases superfamily BFW41_14975 SM00490 helicase superfamily c-terminal domain BFW41_15010 SM00028 Tetratricopeptide repeats BFW41_15030 SM01126 BFW41_15030 BFW41_15035 SM01329 BFW41_15035 BFW41_15040 SM00342 helix_turn_helix, arabinose operon control protein BFW41_15080 SM00354 helix_turn _helix lactose operon repressor BFW41_15090 SM00422 helix_turn_helix, mercury resistance BFW41_15155 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BFW41_15255 SM00382 ATPases associated with a variety of cellular activities BFW41_15265 SM00260 Two component signalling adaptor domain BFW41_15270 SM00260 Two component signalling adaptor domain BFW41_15290 SM00448 cheY-homologous receiver domain BFW41_15295 SM00073 Histidine Phosphotransfer domain BFW41_15295 SM00260 Two component signalling adaptor domain BFW41_15295 SM00387 Histidine kinase-like ATPases BFW41_15295 SM01231 BFW41_15295 BFW41_15305 SM00448 cheY-homologous receiver domain BFW41_15320 SM00382 ATPases associated with a variety of cellular activities BFW41_15320 SM00962 SRP54-type protein, GTPase domain BFW41_15380 SM00382 ATPases associated with a variety of cellular activities BFW41_15415 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW41_15420 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW41_15445 SM00382 ATPases associated with a variety of cellular activities BFW41_15455 SM00382 ATPases associated with a variety of cellular activities BFW41_15460 SM00448 cheY-homologous receiver domain BFW41_15460 SM00862 Transcriptional regulatory protein, C terminal BFW41_15465 SM00387 Histidine kinase-like ATPases BFW41_15505 SM00481 DNA polymerase alpha chain like domain BFW41_15535 SM00862 Transcriptional regulatory protein, C terminal BFW41_15545 SM00877 BFW41_15545 BFW41_15550 SM00877 BFW41_15550 BFW41_15555 SM00877 BFW41_15555 BFW41_15585 SM00877 BFW41_15585 BFW41_15615 SM00528 Domain in histone-like proteins of HNS family BFW41_15630 SM00530 Helix-turn-helix XRE-family like proteins BFW41_15770 SM00857 Resolvase, N terminal domain BFW41_15850 SM00857 Resolvase, N terminal domain BFW41_15895 SM01126 BFW41_15895 BFW41_15940 SM00155 Phospholipase D. Active site motifs. BFW41_15960 SM00642 Alpha-amylase domain BFW41_16005 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW41_16025 SM00267 diguanylate cyclase BFW41_16040 SM00530 Helix-turn-helix XRE-family like proteins BFW41_16065 SM00919 Malic enzyme, NAD binding domain BFW41_16065 SM01274 BFW41_16065 BFW41_16070 SM00342 helix_turn_helix, arabinose operon control protein BFW41_16085 SM00267 diguanylate cyclase BFW41_16145 SM00382 ATPases associated with a variety of cellular activities BFW41_16180 SM00387 Histidine kinase-like ATPases BFW41_16180 SM00388 His Kinase A (phosphoacceptor) domain BFW41_16185 SM00448 cheY-homologous receiver domain BFW41_16185 SM00862 Transcriptional regulatory protein, C terminal BFW41_16205 SM00382 ATPases associated with a variety of cellular activities BFW41_16215 SM00342 helix_turn_helix, arabinose operon control protein BFW41_16225 SM00448 cheY-homologous receiver domain BFW41_16230 SM00387 Histidine kinase-like ATPases BFW41_16245 SM00347 helix_turn_helix multiple antibiotic resistance protein BFW41_16260 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_16295 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BFW41_16295 SM00292 breast cancer carboxy-terminal domain BFW41_16295 SM00532 Ligase N family BFW41_16300 SM00771 ZipA, C-terminal domain (FtsZ-binding) BFW41_16335 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_16360 SM00642 Alpha-amylase domain BFW41_16370 SM00421 helix_turn_helix, Lux Regulon BFW41_16370 SM00448 cheY-homologous receiver domain BFW41_16395 SM00267 diguanylate cyclase BFW41_16400 SM00977 TilS substrate C-terminal domain BFW41_16415 SM00382 ATPases associated with a variety of cellular activities BFW41_16450 SM00849 Metallo-beta-lactamase superfamily BFW41_16490 SM00862 Transcriptional regulatory protein, C terminal BFW41_16500 SM00481 DNA polymerase alpha chain like domain BFW41_16530 SM00935 Outer membrane protein (OmpH-like) BFW41_16540 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BFW41_16585 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW41_16665 SM00028 Tetratricopeptide repeats BFW41_16670 SM00267 diguanylate cyclase BFW41_16680 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BFW41_16680 SM00475 5'-3' exonuclease BFW41_16685 SM01329 BFW41_16685 BFW41_16715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_16715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_16755 SM00900 BFW41_16755 BFW41_16860 SM00421 helix_turn_helix, Lux Regulon BFW41_16945 SM00422 helix_turn_helix, mercury resistance BFW41_16980 SM00830 Chorismate mutase type II BFW41_17040 SM01007 Class II Aldolase and Adducin N-terminal domain BFW41_17050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_17050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_17080 SM00463 Small MutS-related domain BFW41_17095 SM00342 helix_turn_helix, arabinose operon control protein BFW41_17095 SM00478 endonuclease III BFW41_17095 SM01009 AlkA N-terminal domain BFW41_17130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_17135 SM00448 cheY-homologous receiver domain BFW41_17145 SM00073 Histidine Phosphotransfer domain BFW41_17145 SM00260 Two component signalling adaptor domain BFW41_17145 SM00387 Histidine kinase-like ATPases BFW41_17145 SM01231 BFW41_17145 BFW41_17150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_17150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_17155 SM00260 Two component signalling adaptor domain BFW41_17160 SM00091 PAS domain BFW41_17160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_17160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_17165 SM00138 Methyltransferase, chemotaxis proteins BFW41_17175 SM00448 cheY-homologous receiver domain BFW41_17205 SM00052 Putative diguanylate phosphodiesterase BFW41_17220 SM01005 Alanine racemase, C-terminal domain BFW41_17225 SM00382 ATPases associated with a variety of cellular activities BFW41_17230 SM00978 BFW41_17230 BFW41_17235 SM00052 Putative diguanylate phosphodiesterase BFW41_17260 SM00382 ATPases associated with a variety of cellular activities BFW41_17260 SM00448 cheY-homologous receiver domain BFW41_17270 SM00320 WD40 repeats BFW41_17295 SM00260 Two component signalling adaptor domain BFW41_17295 SM00448 cheY-homologous receiver domain BFW41_17305 SM00267 diguanylate cyclase BFW41_17315 SM00984 UDP binding domain BFW41_17375 SM00100 Cyclic nucleotide-monophosphate binding domain BFW41_17375 SM00419 helix_turn_helix, cAMP Regulatory protein BFW41_17385 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BFW41_17385 SM00495 Chitin-binding domain type 3 BFW41_17395 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BFW41_17395 SM00495 Chitin-binding domain type 3 BFW41_17395 SM00636 BFW41_17395 BFW41_17400 SM00387 Histidine kinase-like ATPases BFW41_17400 SM00388 His Kinase A (phosphoacceptor) domain BFW41_17400 SM00448 cheY-homologous receiver domain BFW41_17410 SM00530 Helix-turn-helix XRE-family like proteins BFW41_17460 SM00382 ATPases associated with a variety of cellular activities BFW41_17480 SM01133 BFW41_17480 BFW41_17530 SM00382 ATPases associated with a variety of cellular activities BFW41_17545 SM00271 DnaJ molecular chaperone homology domain BFW41_17575 SM00650 Ribosomal RNA adenine dimethylases BFW41_17590 SM00530 Helix-turn-helix XRE-family like proteins BFW41_17600 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW41_17620 SM01126 BFW41_17620 BFW41_17655 SM00244 prohibitin homologues BFW41_17660 SM00244 prohibitin homologues BFW41_17680 SM00853 MutL C terminal dimerisation domain BFW41_17680 SM01340 BFW41_17680 BFW41_17685 SM00257 Lysin motif BFW41_17685 SM00646 BFW41_17685 BFW41_17720 SM00382 ATPases associated with a variety of cellular activities BFW41_17720 SM00930 BFW41_17720 BFW41_17735 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BFW41_17740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_17740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_17745 SM00052 Putative diguanylate phosphodiesterase BFW41_17745 SM00448 cheY-homologous receiver domain BFW41_17750 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_17750 SM00073 Histidine Phosphotransfer domain BFW41_17750 SM00091 PAS domain BFW41_17750 SM00387 Histidine kinase-like ATPases BFW41_17750 SM00388 His Kinase A (phosphoacceptor) domain BFW41_17750 SM00448 cheY-homologous receiver domain BFW41_17760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW41_17765 SM00073 Histidine Phosphotransfer domain BFW41_17765 SM00091 PAS domain BFW41_17765 SM00387 Histidine kinase-like ATPases BFW41_17765 SM00388 His Kinase A (phosphoacceptor) domain BFW41_17765 SM00448 cheY-homologous receiver domain BFW41_17810 SM01130 BFW41_17810 BFW41_17860 SM00014 Acid phosphatase homologues BFW41_17870 SM00917 LeuA allosteric (dimerisation) domain BFW41_17875 SM01329 BFW41_17875 BFW41_17910 SM00382 ATPases associated with a variety of cellular activities BFW41_17915 SM00670 Large family of predicted nucleotide-binding domains BFW41_17955 SM00487 DEAD-like helicases superfamily BFW41_17955 SM00490 helicase superfamily c-terminal domain BFW41_17965 SM00052 Putative diguanylate phosphodiesterase BFW41_17965 SM00267 diguanylate cyclase BFW41_17980 SM00883 Chaperonin 10 Kd subunit BFW41_18055 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW41_18070 SM00422 helix_turn_helix, mercury resistance BFW41_18075 SM00798 AICARFT/IMPCHase bienzyme BFW41_18075 SM00851 MGS-like domain BFW41_18080 SM01209 BFW41_18080 BFW41_18080 SM01210 BFW41_18080 BFW41_18095 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BFW41_18095 SM00632 BFW41_18095 BFW41_18095 SM00642 Alpha-amylase domain BFW41_18110 SM00400 zinc finger BFW41_18110 SM00493 BFW41_18110 BFW41_18110 SM00766 DNA primase DnaG DnaB-binding BFW41_18130 SM00257 Lysin motif BFW41_18170 SM01192 BFW41_18170 BFW41_18170 SM01193 BFW41_18170 BFW41_18185 SM00954 Region found in RelA / SpoT proteins BFW41_18195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_18195 SM00387 Histidine kinase-like ATPases BFW41_18195 SM00388 His Kinase A (phosphoacceptor) domain BFW41_18195 SM00448 cheY-homologous receiver domain BFW41_18205 SM00644 BFW41_18205 BFW41_18210 SM00420 helix_turn_helix, Deoxyribose operon repressor BFW41_18210 SM01134 BFW41_18210 BFW41_18275 SM00358 Double-stranded RNA binding motif BFW41_18275 SM00535 Ribonuclease III family BFW41_18375 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BFW41_18400 SM00287 Bacterial SH3 domain homologues BFW41_18410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_18410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_18465 SM00382 ATPases associated with a variety of cellular activities BFW41_18470 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_18475 SM00382 ATPases associated with a variety of cellular activities BFW41_18485 SM00448 cheY-homologous receiver domain BFW41_18485 SM00862 Transcriptional regulatory protein, C terminal BFW41_18490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_18490 SM00387 Histidine kinase-like ATPases BFW41_18490 SM00388 His Kinase A (phosphoacceptor) domain BFW41_18585 SM00487 DEAD-like helicases superfamily BFW41_18585 SM00490 helicase superfamily c-terminal domain BFW41_18595 SM00849 Metallo-beta-lactamase superfamily BFW41_18630 SM00347 helix_turn_helix multiple antibiotic resistance protein BFW41_18640 SM00347 helix_turn_helix multiple antibiotic resistance protein BFW41_18655 SM00028 Tetratricopeptide repeats BFW41_18655 SM00267 diguanylate cyclase BFW41_18660 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW41_18660 SM00091 PAS domain BFW41_18660 SM00267 diguanylate cyclase BFW41_18665 SM00327 von Willebrand factor (vWF) type A domain BFW41_18670 SM00382 ATPases associated with a variety of cellular activities BFW41_18710 SM00829 Enoylreductase BFW41_18775 SM00967 RNA 2'-O ribose methyltransferase substrate binding BFW41_18780 SM00316 Ribosomal protein S1-like RNA-binding domain BFW41_18780 SM00357 Cold shock protein domain BFW41_18780 SM00955 BFW41_18780 BFW41_18785 SM00267 diguanylate cyclase BFW41_18800 SM00938 Nitrogen regulatory protein P-II BFW41_18885 SM00904 Riboflavin kinase BFW41_18900 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BFW41_18930 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BFW41_18945 SM00927 DNA mismatch repair enzyme MutH BFW41_18975 SM00382 ATPases associated with a variety of cellular activities BFW41_18975 SM00962 SRP54-type protein, GTPase domain BFW41_18975 SM00963 SRP54-type protein, helical bundle domain BFW41_18985 SM01091 Transporter associated domain BFW41_19000 SM00671 Sel1-like repeats. BFW41_19025 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_19025 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BFW41_19030 SM00382 ATPases associated with a variety of cellular activities BFW41_19045 SM00382 ATPases associated with a variety of cellular activities BFW41_19060 SM00938 Nitrogen regulatory protein P-II BFW41_19125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_19145 SM00487 DEAD-like helicases superfamily BFW41_19145 SM00490 helicase superfamily c-terminal domain BFW41_19225 SM00245 tail specific protease BFW41_19265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_19265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_19265 SM01049 BFW41_19265 BFW41_19280 SM00382 ATPases associated with a variety of cellular activities BFW41_19310 SM01266 BFW41_19310 BFW41_19355 SM00859 Semialdehyde dehydrogenase, NAD binding domain BFW41_19425 SM00421 helix_turn_helix, Lux Regulon BFW41_19475 SM00382 ATPases associated with a variety of cellular activities BFW41_19490 SM00363 S4 RNA-binding domain BFW41_19505 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW41_19505 SM00895 BFW41_19505 BFW41_19540 SM00421 helix_turn_helix, Lux Regulon BFW41_19555 SM00357 Cold shock protein domain BFW41_19555 SM00955 BFW41_19555 BFW41_19590 SM00271 DnaJ molecular chaperone homology domain BFW41_19635 SM00487 DEAD-like helicases superfamily BFW41_19635 SM00490 helicase superfamily c-terminal domain BFW41_19685 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BFW41_19695 SM00862 Transcriptional regulatory protein, C terminal BFW41_19835 SM00642 Alpha-amylase domain BFW41_19855 SM00344 helix_turn_helix ASNC type BFW41_19875 SM00852 Probable molybdopterin binding domain BFW41_19885 SM00382 ATPases associated with a variety of cellular activities BFW41_19915 SM00100 Cyclic nucleotide-monophosphate binding domain BFW41_19950 SM01219 BFW41_19950 BFW41_20060 SM00267 diguanylate cyclase BFW41_20085 SM00876 Biotin and Thiamin Synthesis associated domain BFW41_20130 SM00448 cheY-homologous receiver domain BFW41_20130 SM00862 Transcriptional regulatory protein, C terminal BFW41_20135 SM00388 His Kinase A (phosphoacceptor) domain BFW41_20150 SM01018 B12 binding domain BFW41_20190 SM00342 helix_turn_helix, arabinose operon control protein BFW41_20195 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW41_20195 SM00091 PAS domain BFW41_20205 SM00331 Sigma factor PP2C-like phosphatases BFW41_20205 SM00387 Histidine kinase-like ATPases BFW41_20210 SM00387 Histidine kinase-like ATPases BFW41_20210 SM00388 His Kinase A (phosphoacceptor) domain BFW41_20210 SM00448 cheY-homologous receiver domain BFW41_20215 SM00448 cheY-homologous receiver domain BFW41_20215 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BFW41_20275 SM00886 Stress responsive A/B Barrel Domain BFW41_20285 SM00316 Ribosomal protein S1-like RNA-binding domain BFW41_20355 SM00382 ATPases associated with a variety of cellular activities BFW41_20370 SM00965 Secretin and TonB N terminus short domain BFW41_20400 SM00052 Putative diguanylate phosphodiesterase BFW41_20400 SM00267 diguanylate cyclase BFW41_20405 SM00052 Putative diguanylate phosphodiesterase BFW41_20435 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW41_20435 SM00866 BFW41_20435 BFW41_20440 SM00947 Carbonic anhydrase BFW41_20455 SM00382 ATPases associated with a variety of cellular activities BFW41_20490 SM00155 Phospholipase D. Active site motifs. BFW41_20495 SM00062 Bacterial periplasmic substrate-binding proteins BFW41_20580 SM00822 BFW41_20580 BFW41_20645 SM00662 RNA polymerases D BFW41_20650 SM00363 S4 RNA-binding domain BFW41_20650 SM01390 BFW41_20650 BFW41_20710 SM01374 BFW41_20710 BFW41_20730 SM00322 K homology RNA-binding domain BFW41_20745 SM01382 BFW41_20745 BFW41_20745 SM01383 BFW41_20745 BFW41_20765 SM01403 BFW41_20765 BFW41_20775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_20775 SM00387 Histidine kinase-like ATPases BFW41_20775 SM00388 His Kinase A (phosphoacceptor) domain BFW41_20780 SM00448 cheY-homologous receiver domain BFW41_20780 SM00862 Transcriptional regulatory protein, C terminal BFW41_20790 SM00316 Ribosomal protein S1-like RNA-binding domain BFW41_20790 SM00732 Likely ribonuclease with RNase H fold. BFW41_20835 SM00450 Rhodanese Homology Domain BFW41_20855 SM00354 helix_turn _helix lactose operon repressor BFW41_20880 SM00155 Phospholipase D. Active site motifs. BFW41_20885 SM00487 DEAD-like helicases superfamily BFW41_20885 SM00490 helicase superfamily c-terminal domain BFW41_20925 SM01230 BFW41_20925 BFW41_20935 SM00091 PAS domain BFW41_20935 SM00387 Histidine kinase-like ATPases BFW41_20935 SM00388 His Kinase A (phosphoacceptor) domain BFW41_20940 SM00382 ATPases associated with a variety of cellular activities BFW41_20940 SM00448 cheY-homologous receiver domain BFW41_20950 SM00729 Elongator protein 3, MiaB family, Radical SAM BFW41_20995 SM01001 AIR carboxylase BFW41_21015 SM00257 Lysin motif BFW41_21070 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BFW41_21070 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BFW41_21090 SM00530 Helix-turn-helix XRE-family like proteins BFW41_21110 SM00342 helix_turn_helix, arabinose operon control protein BFW41_21120 SM00831 Cation transporter/ATPase, N-terminus BFW41_21125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BFW41_21125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_21185 SM00326 Src homology 3 domains BFW41_21200 SM01321 BFW41_21200 BFW41_21215 SM00382 ATPases associated with a variety of cellular activities BFW41_21235 SM00829 Enoylreductase BFW41_21280 SM01038 Beta galactosidase small chain BFW41_21285 SM00354 helix_turn _helix lactose operon repressor BFW41_21325 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BFW41_21325 SM00474 3'-5' exonuclease BFW41_21325 SM00475 5'-3' exonuclease BFW41_21325 SM00482 DNA polymerase A domain BFW41_21345 SM00971 Serine acetyltransferase, N-terminal BFW41_21355 SM00448 cheY-homologous receiver domain BFW41_21355 SM00862 Transcriptional regulatory protein, C terminal BFW41_21360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_21360 SM00387 Histidine kinase-like ATPases BFW41_21360 SM00388 His Kinase A (phosphoacceptor) domain BFW41_21390 SM00563 Phosphate acyltransferases BFW41_21415 SM00829 Enoylreductase BFW41_21420 SM00354 helix_turn _helix lactose operon repressor BFW41_21470 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BFW41_21470 SM01232 BFW41_21470 BFW41_21540 SM00881 CoA binding domain BFW41_21600 SM00448 cheY-homologous receiver domain BFW41_21600 SM00862 Transcriptional regulatory protein, C terminal BFW41_21605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BFW41_21605 SM00387 Histidine kinase-like ATPases BFW41_21605 SM00388 His Kinase A (phosphoacceptor) domain BFW41_21650 SM00836 DALR anticodon binding domain BFW41_21710 SM00849 Metallo-beta-lactamase superfamily BFW41_21715 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BFW41_21715 SM00382 ATPases associated with a variety of cellular activities BFW41_21720 SM00345 helix_turn_helix gluconate operon transcriptional repressor BFW41_21720 SM00866 BFW41_21720 BFW41_21735 SM00354 helix_turn _helix lactose operon repressor BFW41_21755 SM00382 ATPases associated with a variety of cellular activities BFW41_21760 SM00382 ATPases associated with a variety of cellular activities BFW41_21765 SM00342 helix_turn_helix, arabinose operon control protein BFW41_21775 SM00450 Rhodanese Homology Domain BFW41_21810 SM00357 Cold shock protein domain BFW41_21810 SM00382 ATPases associated with a variety of cellular activities BFW41_21810 SM00959 Rho termination factor, N-terminal domain BFW41_21820 SM00487 DEAD-like helicases superfamily BFW41_21820 SM00490 helicase superfamily c-terminal domain BFW41_21845 SM00052 Putative diguanylate phosphodiesterase BFW41_21845 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BFW41_21845 SM00091 PAS domain BFW41_21845 SM00267 diguanylate cyclase BFW41_21855 SM01004 Delta-aminolevulinic acid dehydratase BFW41_21970 SM00421 helix_turn_helix, Lux Regulon BFW41_21980 SM00420 helix_turn_helix, Deoxyribose operon repressor BFW41_21980 SM01134 BFW41_21980 BFW41_21985 SM00448 cheY-homologous receiver domain BFW41_21985 SM00862 Transcriptional regulatory protein, C terminal BFW41_21990 SM00387 Histidine kinase-like ATPases BFW41_21990 SM00388 His Kinase A (phosphoacceptor) domain BFW41_22015 SM00382 ATPases associated with a variety of cellular activities BFW41_22055 SM00470 ParB-like nuclease domain BFW41_22070 SM01228 BFW41_22070 BFW41_22085 SM00382 ATPases associated with a variety of cellular activities BFW41_22090 SM00382 ATPases associated with a variety of cellular activities BFW41_22110 SM00530 Helix-turn-helix XRE-family like proteins BFW41_22125 SM00857 Resolvase, N terminal domain BFW41_22130 SM00422 helix_turn_helix, mercury resistance BFW41_22155 SM00422 helix_turn_helix, mercury resistance BFW41_22165 SM00052 Putative diguanylate phosphodiesterase BFW41_22265 SM00857 Resolvase, N terminal domain BFW41_22275 SM00487 DEAD-like helicases superfamily BFW41_22350 SM00382 ATPases associated with a variety of cellular activities BFW41_22360 SM00062 Bacterial periplasmic substrate-binding proteins