V429_00005 SM00382 ATPases associated with a variety of cellular activities V429_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain V429_00010 SM00480 DNA polymerase III beta subunit V429_00020 SM00387 Histidine kinase-like ATPases V429_00020 SM00433 TopoisomeraseII V429_00055 SM00342 helix_turn_helix, arabinose operon control protein V429_00065 SM00448 cheY-homologous receiver domain V429_00065 SM00862 Transcriptional regulatory protein, C terminal V429_00070 SM00387 Histidine kinase-like ATPases V429_00070 SM00388 His Kinase A (phosphoacceptor) domain V429_00100 SM00091 PAS domain V429_00100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_00100 SM00387 Histidine kinase-like ATPases V429_00140 SM00458 Ricin-type beta-trefoil V429_00160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_00160 SM00387 Histidine kinase-like ATPases V429_00160 SM00388 His Kinase A (phosphoacceptor) domain V429_00165 SM00448 cheY-homologous receiver domain V429_00195 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V429_00195 SM00954 Region found in RelA / SpoT proteins V429_00200 SM01409 V429_00200 V429_00205 SM00072 Guanylate kinase homologues. V429_00220 SM00267 diguanylate cyclase V429_00265 SM00267 diguanylate cyclase V429_00305 SM00487 DEAD-like helicases superfamily V429_00390 SM00421 helix_turn_helix, Lux Regulon V429_00390 SM00448 cheY-homologous receiver domain V429_00395 SM00062 Bacterial periplasmic substrate-binding proteins V429_00395 SM00387 Histidine kinase-like ATPases V429_00395 SM00388 His Kinase A (phosphoacceptor) domain V429_00395 SM00448 cheY-homologous receiver domain V429_00405 SM00387 Histidine kinase-like ATPases V429_00410 SM00448 cheY-homologous receiver domain V429_00410 SM00850 LytTr DNA-binding domain V429_00425 SM01001 AIR carboxylase V429_00455 SM00360 RNA recognition motif V429_00535 SM01004 Delta-aminolevulinic acid dehydratase V429_00545 SM00052 Putative diguanylate phosphodiesterase V429_00545 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V429_00545 SM00091 PAS domain V429_00545 SM00267 diguanylate cyclase V429_00570 SM00487 DEAD-like helicases superfamily V429_00570 SM00490 helicase superfamily c-terminal domain V429_00580 SM00357 Cold shock protein domain V429_00580 SM00382 ATPases associated with a variety of cellular activities V429_00580 SM00959 Rho termination factor, N-terminal domain V429_00615 SM00450 Rhodanese Homology Domain V429_00625 SM00342 helix_turn_helix, arabinose operon control protein V429_00630 SM00382 ATPases associated with a variety of cellular activities V429_00635 SM00382 ATPases associated with a variety of cellular activities V429_00655 SM00354 helix_turn _helix lactose operon repressor V429_00670 SM00345 helix_turn_helix gluconate operon transcriptional repressor V429_00670 SM00866 V429_00670 V429_00675 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V429_00675 SM00382 ATPases associated with a variety of cellular activities V429_00680 SM00849 Metallo-beta-lactamase superfamily V429_00735 SM00836 DALR anticodon binding domain V429_00780 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_00780 SM00387 Histidine kinase-like ATPases V429_00780 SM00388 His Kinase A (phosphoacceptor) domain V429_00785 SM00448 cheY-homologous receiver domain V429_00785 SM00862 Transcriptional regulatory protein, C terminal V429_00845 SM00881 CoA binding domain V429_00920 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain V429_00920 SM01232 V429_00920 V429_00970 SM00354 helix_turn _helix lactose operon repressor V429_00975 SM00829 Enoylreductase V429_01010 SM00563 Phosphate acyltransferases V429_01040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_01040 SM00387 Histidine kinase-like ATPases V429_01040 SM00388 His Kinase A (phosphoacceptor) domain V429_01045 SM00448 cheY-homologous receiver domain V429_01045 SM00862 Transcriptional regulatory protein, C terminal V429_01055 SM00971 Serine acetyltransferase, N-terminal V429_01075 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs V429_01075 SM00474 3'-5' exonuclease V429_01075 SM00475 5'-3' exonuclease V429_01075 SM00482 DNA polymerase A domain V429_01120 SM00354 helix_turn _helix lactose operon repressor V429_01125 SM01038 Beta galactosidase small chain V429_01170 SM00829 Enoylreductase V429_01195 SM00382 ATPases associated with a variety of cellular activities V429_01215 SM01321 V429_01215 V429_01275 SM00831 Cation transporter/ATPase, N-terminus V429_01285 SM00342 helix_turn_helix, arabinose operon control protein V429_01305 SM00530 Helix-turn-helix XRE-family like proteins V429_01325 SM01002 Alanine dehydrogenase/PNT, C-terminal domain V429_01325 SM01003 Alanine dehydrogenase/PNT, N-terminal domain V429_01380 SM00257 Lysin motif V429_01400 SM01001 AIR carboxylase V429_01450 SM00729 Elongator protein 3, MiaB family, Radical SAM V429_01460 SM00382 ATPases associated with a variety of cellular activities V429_01460 SM00448 cheY-homologous receiver domain V429_01465 SM00091 PAS domain V429_01465 SM00387 Histidine kinase-like ATPases V429_01465 SM00388 His Kinase A (phosphoacceptor) domain V429_01475 SM01230 V429_01475 V429_01510 SM00487 DEAD-like helicases superfamily V429_01510 SM00490 helicase superfamily c-terminal domain V429_01515 SM00155 Phospholipase D. Active site motifs. V429_01540 SM00354 helix_turn _helix lactose operon repressor V429_01560 SM00450 Rhodanese Homology Domain V429_01605 SM00316 Ribosomal protein S1-like RNA-binding domain V429_01605 SM00732 Likely ribonuclease with RNase H fold. V429_01615 SM00448 cheY-homologous receiver domain V429_01615 SM00862 Transcriptional regulatory protein, C terminal V429_01620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_01620 SM00387 Histidine kinase-like ATPases V429_01620 SM00388 His Kinase A (phosphoacceptor) domain V429_01630 SM01403 V429_01630 V429_01650 SM01382 V429_01650 V429_01650 SM01383 V429_01650 V429_01665 SM00322 K homology RNA-binding domain V429_01685 SM01374 V429_01685 V429_01750 SM00363 S4 RNA-binding domain V429_01750 SM01390 V429_01750 V429_01755 SM00662 RNA polymerases D V429_01825 SM00822 V429_01825 V429_01920 SM00062 Bacterial periplasmic substrate-binding proteins V429_01930 SM00155 Phospholipase D. Active site motifs. V429_01965 SM00382 ATPases associated with a variety of cellular activities V429_01985 SM00947 Carbonic anhydrase V429_01990 SM00345 helix_turn_helix gluconate operon transcriptional repressor V429_01990 SM00866 V429_01990 V429_02020 SM00052 Putative diguanylate phosphodiesterase V429_02025 SM00052 Putative diguanylate phosphodiesterase V429_02025 SM00267 diguanylate cyclase V429_02055 SM00965 Secretin and TonB N terminus short domain V429_02070 SM00382 ATPases associated with a variety of cellular activities V429_02140 SM00316 Ribosomal protein S1-like RNA-binding domain V429_02150 SM00886 Stress responsive A/B Barrel Domain V429_02210 SM00448 cheY-homologous receiver domain V429_02210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V429_02215 SM00387 Histidine kinase-like ATPases V429_02215 SM00388 His Kinase A (phosphoacceptor) domain V429_02215 SM00448 cheY-homologous receiver domain V429_02220 SM00331 Sigma factor PP2C-like phosphatases V429_02220 SM00387 Histidine kinase-like ATPases V429_02230 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V429_02230 SM00091 PAS domain V429_02235 SM00342 helix_turn_helix, arabinose operon control protein V429_02280 SM00862 Transcriptional regulatory protein, C terminal V429_02370 SM01018 B12 binding domain V429_02385 SM00388 His Kinase A (phosphoacceptor) domain V429_02390 SM00448 cheY-homologous receiver domain V429_02390 SM00862 Transcriptional regulatory protein, C terminal V429_02405 SM00999 Aerolysin toxin V429_02435 SM00876 Biotin and Thiamin Synthesis associated domain V429_02465 SM00267 diguanylate cyclase V429_02575 SM01219 V429_02575 V429_02610 SM00100 Cyclic nucleotide-monophosphate binding domain V429_02640 SM00382 ATPases associated with a variety of cellular activities V429_02655 SM00852 Probable molybdopterin binding domain V429_02675 SM00344 helix_turn_helix ASNC type V429_02695 SM00642 Alpha-amylase domain V429_02840 SM00862 Transcriptional regulatory protein, C terminal V429_02850 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain V429_02900 SM00487 DEAD-like helicases superfamily V429_02900 SM00490 helicase superfamily c-terminal domain V429_02985 SM00357 Cold shock protein domain V429_02985 SM00955 V429_02985 V429_03000 SM00421 helix_turn_helix, Lux Regulon V429_03035 SM00345 helix_turn_helix gluconate operon transcriptional repressor V429_03035 SM00895 V429_03035 V429_03050 SM00363 S4 RNA-binding domain V429_03065 SM00382 ATPases associated with a variety of cellular activities V429_03120 SM00421 helix_turn_helix, Lux Regulon V429_03155 SM00342 helix_turn_helix, arabinose operon control protein V429_03190 SM00859 Semialdehyde dehydrogenase, NAD binding domain V429_03235 SM01266 V429_03235 V429_03265 SM00382 ATPases associated with a variety of cellular activities V429_03285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_03285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_03285 SM01049 V429_03285 V429_03315 SM00245 tail specific protease V429_03395 SM00487 DEAD-like helicases superfamily V429_03395 SM00490 helicase superfamily c-terminal domain V429_03415 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_03485 SM00938 Nitrogen regulatory protein P-II V429_03500 SM00382 ATPases associated with a variety of cellular activities V429_03515 SM00382 ATPases associated with a variety of cellular activities V429_03520 SM00062 Bacterial periplasmic substrate-binding proteins V429_03520 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. V429_03540 SM00671 Sel1-like repeats. V429_03555 SM01091 Transporter associated domain V429_03565 SM00382 ATPases associated with a variety of cellular activities V429_03565 SM00962 SRP54-type protein, GTPase domain V429_03565 SM00963 SRP54-type protein, helical bundle domain V429_03595 SM00927 DNA mismatch repair enzyme MutH V429_03605 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V429_03635 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor V429_03650 SM00904 Riboflavin kinase V429_03735 SM00938 Nitrogen regulatory protein P-II V429_03750 SM00267 diguanylate cyclase V429_03755 SM00316 Ribosomal protein S1-like RNA-binding domain V429_03755 SM00357 Cold shock protein domain V429_03755 SM00955 V429_03755 V429_03760 SM00967 RNA 2'-O ribose methyltransferase substrate binding V429_03830 SM00829 Enoylreductase V429_03875 SM00382 ATPases associated with a variety of cellular activities V429_03880 SM00327 von Willebrand factor (vWF) type A domain V429_03885 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V429_03885 SM00091 PAS domain V429_03885 SM00267 diguanylate cyclase V429_03890 SM00028 Tetratricopeptide repeats V429_03890 SM00267 diguanylate cyclase V429_03905 SM00347 helix_turn_helix multiple antibiotic resistance protein V429_03915 SM00347 helix_turn_helix multiple antibiotic resistance protein V429_03960 SM00849 Metallo-beta-lactamase superfamily V429_03970 SM00487 DEAD-like helicases superfamily V429_03970 SM00490 helicase superfamily c-terminal domain V429_04055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_04055 SM00387 Histidine kinase-like ATPases V429_04055 SM00388 His Kinase A (phosphoacceptor) domain V429_04060 SM00448 cheY-homologous receiver domain V429_04060 SM00862 Transcriptional regulatory protein, C terminal V429_04070 SM00382 ATPases associated with a variety of cellular activities V429_04075 SM00062 Bacterial periplasmic substrate-binding proteins V429_04080 SM00382 ATPases associated with a variety of cellular activities V429_04130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_04130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_04140 SM00287 Bacterial SH3 domain homologues V429_04165 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain V429_04265 SM00358 Double-stranded RNA binding motif V429_04265 SM00535 Ribonuclease III family V429_04330 SM00420 helix_turn_helix, Deoxyribose operon repressor V429_04330 SM01134 V429_04330 V429_04335 SM00644 V429_04335 V429_04345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_04345 SM00387 Histidine kinase-like ATPases V429_04345 SM00388 His Kinase A (phosphoacceptor) domain V429_04345 SM00448 cheY-homologous receiver domain V429_04355 SM00954 Region found in RelA / SpoT proteins V429_04370 SM01192 V429_04370 V429_04370 SM01193 V429_04370 V429_04410 SM00257 Lysin motif V429_04435 SM00400 zinc finger V429_04435 SM00493 V429_04435 V429_04435 SM00766 DNA primase DnaG DnaB-binding V429_04455 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins V429_04455 SM00632 V429_04455 V429_04455 SM00642 Alpha-amylase domain V429_04470 SM01209 V429_04470 V429_04470 SM01210 V429_04470 V429_04475 SM00798 AICARFT/IMPCHase bienzyme V429_04475 SM00851 MGS-like domain V429_04480 SM00422 helix_turn_helix, mercury resistance V429_04495 SM00729 Elongator protein 3, MiaB family, Radical SAM V429_04575 SM00883 Chaperonin 10 Kd subunit V429_04590 SM00052 Putative diguanylate phosphodiesterase V429_04590 SM00267 diguanylate cyclase V429_04605 SM00487 DEAD-like helicases superfamily V429_04605 SM00490 helicase superfamily c-terminal domain V429_04645 SM00670 Large family of predicted nucleotide-binding domains V429_04650 SM00382 ATPases associated with a variety of cellular activities V429_04685 SM01329 V429_04685 V429_04690 SM00917 LeuA allosteric (dimerisation) domain V429_04700 SM00014 Acid phosphatase homologues V429_04755 SM01130 V429_04755 V429_04800 SM00073 Histidine Phosphotransfer domain V429_04800 SM00091 PAS domain V429_04800 SM00387 Histidine kinase-like ATPases V429_04800 SM00388 His Kinase A (phosphoacceptor) domain V429_04800 SM00448 cheY-homologous receiver domain V429_04805 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V429_04815 SM00062 Bacterial periplasmic substrate-binding proteins V429_04815 SM00073 Histidine Phosphotransfer domain V429_04815 SM00091 PAS domain V429_04815 SM00387 Histidine kinase-like ATPases V429_04815 SM00388 His Kinase A (phosphoacceptor) domain V429_04815 SM00448 cheY-homologous receiver domain V429_04820 SM00052 Putative diguanylate phosphodiesterase V429_04820 SM00448 cheY-homologous receiver domain V429_04825 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_04825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_04830 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. V429_04845 SM00382 ATPases associated with a variety of cellular activities V429_04845 SM00930 V429_04845 V429_04875 SM00257 Lysin motif V429_04875 SM00646 V429_04875 V429_04885 SM00853 MutL C terminal dimerisation domain V429_04885 SM01340 V429_04885 V429_04905 SM00244 prohibitin homologues V429_04910 SM00244 prohibitin homologues V429_04960 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V429_04970 SM00530 Helix-turn-helix XRE-family like proteins V429_04985 SM00650 Ribosomal RNA adenine dimethylases V429_05015 SM00271 DnaJ molecular chaperone homology domain V429_05030 SM00382 ATPases associated with a variety of cellular activities V429_05160 SM00382 ATPases associated with a variety of cellular activities V429_05170 SM00382 ATPases associated with a variety of cellular activities V429_05200 SM00507 HNH nucleases V429_05365 SM01133 V429_05365 V429_05385 SM00382 ATPases associated with a variety of cellular activities V429_05435 SM00530 Helix-turn-helix XRE-family like proteins V429_05445 SM00387 Histidine kinase-like ATPases V429_05445 SM00388 His Kinase A (phosphoacceptor) domain V429_05445 SM00448 cheY-homologous receiver domain V429_05450 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins V429_05450 SM00495 Chitin-binding domain type 3 V429_05450 SM00636 V429_05450 V429_05460 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins V429_05460 SM00495 Chitin-binding domain type 3 V429_05470 SM00100 Cyclic nucleotide-monophosphate binding domain V429_05470 SM00419 helix_turn_helix, cAMP Regulatory protein V429_05530 SM00984 UDP binding domain V429_05540 SM00267 diguanylate cyclase V429_05550 SM00260 Two component signalling adaptor domain V429_05550 SM00448 cheY-homologous receiver domain V429_05575 SM00320 WD40 repeats V429_05585 SM00382 ATPases associated with a variety of cellular activities V429_05585 SM00448 cheY-homologous receiver domain V429_05610 SM00052 Putative diguanylate phosphodiesterase V429_05615 SM00978 V429_05615 V429_05625 SM00382 ATPases associated with a variety of cellular activities V429_05630 SM01005 Alanine racemase, C-terminal domain V429_05650 SM00052 Putative diguanylate phosphodiesterase V429_05680 SM00448 cheY-homologous receiver domain V429_05690 SM00138 Methyltransferase, chemotaxis proteins V429_05695 SM00091 PAS domain V429_05695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_05695 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_05700 SM00260 Two component signalling adaptor domain V429_05705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_05705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_05710 SM00073 Histidine Phosphotransfer domain V429_05710 SM00260 Two component signalling adaptor domain V429_05710 SM00387 Histidine kinase-like ATPases V429_05710 SM01231 V429_05710 V429_05720 SM00448 cheY-homologous receiver domain V429_05725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_05755 SM00342 helix_turn_helix, arabinose operon control protein V429_05755 SM00478 endonuclease III V429_05755 SM01009 AlkA N-terminal domain V429_05770 SM00463 Small MutS-related domain V429_05800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_05800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_05850 SM00382 ATPases associated with a variety of cellular activities V429_05865 SM00100 Cyclic nucleotide-monophosphate binding domain V429_05865 SM00419 helix_turn_helix, cAMP Regulatory protein V429_05880 SM00382 ATPases associated with a variety of cellular activities V429_05905 SM00342 helix_turn_helix, arabinose operon control protein V429_05925 SM00487 DEAD-like helicases superfamily V429_05930 SM00487 DEAD-like helicases superfamily V429_05930 SM00490 helicase superfamily c-terminal domain V429_05950 SM00487 DEAD-like helicases superfamily V429_05950 SM00490 helicase superfamily c-terminal domain V429_06020 SM00530 Helix-turn-helix XRE-family like proteins V429_06060 SM00830 Chorismate mutase type II V429_06095 SM00422 helix_turn_helix, mercury resistance V429_06185 SM00421 helix_turn_helix, Lux Regulon V429_06290 SM00900 V429_06290 V429_06330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_06330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_06360 SM01329 V429_06360 V429_06365 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs V429_06365 SM00475 5'-3' exonuclease V429_06375 SM00267 diguanylate cyclase V429_06380 SM00028 Tetratricopeptide repeats V429_06460 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V429_06510 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. V429_06520 SM00935 Outer membrane protein (OmpH-like) V429_06550 SM00481 DNA polymerase alpha chain like domain V429_06560 SM00862 Transcriptional regulatory protein, C terminal V429_06595 SM00849 Metallo-beta-lactamase superfamily V429_06615 SM00382 ATPases associated with a variety of cellular activities V429_06630 SM00977 TilS substrate C-terminal domain V429_06635 SM00267 diguanylate cyclase V429_06660 SM00421 helix_turn_helix, Lux Regulon V429_06660 SM00448 cheY-homologous receiver domain V429_06670 SM00642 Alpha-amylase domain V429_06695 SM00062 Bacterial periplasmic substrate-binding proteins V429_06730 SM00771 ZipA, C-terminal domain (FtsZ-binding) V429_06735 SM00278 Helix-hairpin-helix DNA-binding motif class 1 V429_06735 SM00292 breast cancer carboxy-terminal domain V429_06735 SM00532 Ligase N family V429_06770 SM00062 Bacterial periplasmic substrate-binding proteins V429_06785 SM00347 helix_turn_helix multiple antibiotic resistance protein V429_06800 SM00919 Malic enzyme, NAD binding domain V429_06800 SM01274 V429_06800 V429_06805 SM00387 Histidine kinase-like ATPases V429_06810 SM00448 cheY-homologous receiver domain V429_06820 SM00342 helix_turn_helix, arabinose operon control protein V429_06830 SM00382 ATPases associated with a variety of cellular activities V429_06850 SM00448 cheY-homologous receiver domain V429_06850 SM00862 Transcriptional regulatory protein, C terminal V429_06855 SM00387 Histidine kinase-like ATPases V429_06855 SM00388 His Kinase A (phosphoacceptor) domain V429_06890 SM00382 ATPases associated with a variety of cellular activities V429_06950 SM00267 diguanylate cyclase V429_06965 SM00342 helix_turn_helix, arabinose operon control protein V429_06970 SM00919 Malic enzyme, NAD binding domain V429_06970 SM01274 V429_06970 V429_06995 SM00530 Helix-turn-helix XRE-family like proteins V429_07010 SM00267 diguanylate cyclase V429_07030 SM00729 Elongator protein 3, MiaB family, Radical SAM V429_07080 SM00642 Alpha-amylase domain V429_07100 SM00155 Phospholipase D. Active site motifs. V429_07165 SM00487 DEAD-like helicases superfamily V429_07165 SM00490 helicase superfamily c-terminal domain V429_07255 SM00530 Helix-turn-helix XRE-family like proteins V429_07325 SM00382 ATPases associated with a variety of cellular activities V429_07340 SM01007 Class II Aldolase and Adducin N-terminal domain V429_07360 SM00420 helix_turn_helix, Deoxyribose operon repressor V429_07360 SM01134 V429_07360 V429_07370 SM01130 V429_07370 V429_07445 SM00877 V429_07445 V429_07475 SM00877 V429_07475 V429_07480 SM00877 V429_07480 V429_07485 SM00877 V429_07485 V429_07495 SM00862 Transcriptional regulatory protein, C terminal V429_07525 SM00481 DNA polymerase alpha chain like domain V429_07565 SM00387 Histidine kinase-like ATPases V429_07570 SM00448 cheY-homologous receiver domain V429_07570 SM00862 Transcriptional regulatory protein, C terminal V429_07575 SM00382 ATPases associated with a variety of cellular activities V429_07585 SM00382 ATPases associated with a variety of cellular activities V429_07610 SM00729 Elongator protein 3, MiaB family, Radical SAM V429_07615 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V429_07645 SM00382 ATPases associated with a variety of cellular activities V429_07705 SM00382 ATPases associated with a variety of cellular activities V429_07705 SM00962 SRP54-type protein, GTPase domain V429_07720 SM00448 cheY-homologous receiver domain V429_07730 SM00073 Histidine Phosphotransfer domain V429_07730 SM00260 Two component signalling adaptor domain V429_07730 SM00387 Histidine kinase-like ATPases V429_07730 SM01231 V429_07730 V429_07735 SM00448 cheY-homologous receiver domain V429_07755 SM00260 Two component signalling adaptor domain V429_07760 SM00260 Two component signalling adaptor domain V429_07770 SM00382 ATPases associated with a variety of cellular activities V429_07870 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. V429_07950 SM00354 helix_turn _helix lactose operon repressor V429_07990 SM00342 helix_turn_helix, arabinose operon control protein V429_07995 SM01329 V429_07995 V429_08050 SM00487 DEAD-like helicases superfamily V429_08200 SM00959 Rho termination factor, N-terminal domain V429_08290 SM00859 Semialdehyde dehydrogenase, NAD binding domain V429_08320 SM00858 V429_08320 V429_08340 SM00382 ATPases associated with a variety of cellular activities V429_08410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_08410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_08435 SM01091 Transporter associated domain V429_08500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_08510 SM00729 Elongator protein 3, MiaB family, Radical SAM V429_08510 SM00876 Biotin and Thiamin Synthesis associated domain V429_08535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_08550 SM00890 Domain of unknown function V429_08560 SM00342 helix_turn_helix, arabinose operon control protein V429_08635 SM00458 Ricin-type beta-trefoil V429_08720 SM01081 Putative carbohydrate binding domain V429_08775 SM00347 helix_turn_helix multiple antibiotic resistance protein V429_08790 SM00382 ATPases associated with a variety of cellular activities V429_08865 SM00052 Putative diguanylate phosphodiesterase V429_08865 SM00267 diguanylate cyclase V429_08875 SM00354 helix_turn _helix lactose operon repressor V429_08900 SM00257 Lysin motif V429_08905 SM00849 Metallo-beta-lactamase superfamily V429_08920 SM00479 V429_08920 V429_08930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V429_08955 SM00073 Histidine Phosphotransfer domain V429_08965 SM00897 FIST N domain V429_08965 SM01204 V429_08965 V429_08970 SM00387 Histidine kinase-like ATPases V429_08970 SM00388 His Kinase A (phosphoacceptor) domain V429_08970 SM00448 cheY-homologous receiver domain V429_08975 SM00464 Found in ATP-dependent protease La (LON) V429_08980 SM00421 helix_turn_helix, Lux Regulon V429_08980 SM00448 cheY-homologous receiver domain V429_08985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_08985 SM00387 Histidine kinase-like ATPases V429_08990 SM00729 Elongator protein 3, MiaB family, Radical SAM V429_09010 SM00926 Molybdopterin oxidoreductase Fe4S4 domain V429_09035 SM00852 Probable molybdopterin binding domain V429_09065 SM00382 ATPases associated with a variety of cellular activities V429_09080 SM00852 Probable molybdopterin binding domain V429_09090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_09090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_09110 SM00867 YceI-like domain V429_09120 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain V429_09130 SM00563 Phosphate acyltransferases V429_09155 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_09155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_09180 SM00855 Phosphoglycerate mutase family V429_09185 SM00487 DEAD-like helicases superfamily V429_09185 SM00490 helicase superfamily c-terminal domain V429_09205 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase V429_09215 SM00363 S4 RNA-binding domain V429_09240 SM00871 Bacterial transcription activator, effector binding domain V429_09270 SM00345 helix_turn_helix gluconate operon transcriptional repressor V429_09335 SM00420 helix_turn_helix, Deoxyribose operon repressor V429_09335 SM01134 V429_09335 V429_09360 SM00830 Chorismate mutase type II V429_09435 SM00382 ATPases associated with a variety of cellular activities V429_09510 SM00382 ATPases associated with a variety of cellular activities V429_09515 SM00062 Bacterial periplasmic substrate-binding proteins V429_09515 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. V429_09540 SM00052 Putative diguanylate phosphodiesterase V429_09540 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V429_09540 SM00091 PAS domain V429_09540 SM00267 diguanylate cyclase V429_09545 SM00450 Rhodanese Homology Domain V429_09580 SM01359 V429_09580 V429_09580 SM01360 V429_09580 V429_09595 SM00981 V429_09595 V429_09675 SM00858 V429_09675 V429_09735 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_09735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_09795 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor V429_09835 SM00116 Domain in cystathionine beta-synthase and other proteins. V429_09850 SM01323 V429_09850 V429_09865 SM00450 Rhodanese Homology Domain V429_09870 SM00028 Tetratricopeptide repeats V429_09920 SM00271 DnaJ molecular chaperone homology domain V429_09945 SM00562 V429_09945 V429_09955 SM00028 Tetratricopeptide repeats V429_09960 SM00530 Helix-turn-helix XRE-family like proteins V429_09980 SM00564 beta-propeller repeat V429_09995 SM00062 Bacterial periplasmic substrate-binding proteins V429_10000 SM01211 V429_10000 V429_10005 SM01126 V429_10005 V429_10045 SM00926 Molybdopterin oxidoreductase Fe4S4 domain V429_10045 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region V429_10050 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region V429_10115 SM00360 RNA recognition motif V429_10140 SM00091 PAS domain V429_10145 SM00448 cheY-homologous receiver domain V429_10165 SM00052 Putative diguanylate phosphodiesterase V429_10165 SM00267 diguanylate cyclase V429_10210 SM00316 Ribosomal protein S1-like RNA-binding domain V429_10215 SM00411 bacterial (prokaryotic) histone like domain V429_10225 SM00028 Tetratricopeptide repeats V429_10230 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family V429_10240 SM01144 V429_10240 V429_10265 SM00528 Domain in histone-like proteins of HNS family V429_10280 SM01154 V429_10280 V429_10345 SM00357 Cold shock protein domain V429_10355 SM00382 ATPases associated with a variety of cellular activities V429_10355 SM01086 C-terminal, D2-small domain, of ClpB protein V429_10360 SM00316 Ribosomal protein S1-like RNA-binding domain V429_10380 SM00267 diguanylate cyclase V429_10380 SM00448 cheY-homologous receiver domain V429_10390 SM00344 helix_turn_helix ASNC type V429_10395 SM00843 V429_10395 V429_10405 SM00382 ATPases associated with a variety of cellular activities V429_10435 SM00382 ATPases associated with a variety of cellular activities V429_10440 SM00382 ATPases associated with a variety of cellular activities V429_10465 SM00382 ATPases associated with a variety of cellular activities V429_10510 SM00091 PAS domain V429_10510 SM00382 ATPases associated with a variety of cellular activities V429_10520 SM00267 diguanylate cyclase V429_10520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_10585 SM01007 Class II Aldolase and Adducin N-terminal domain V429_10600 SM00382 ATPases associated with a variety of cellular activities V429_10610 SM00342 helix_turn_helix, arabinose operon control protein V429_10675 SM00825 Beta-ketoacyl synthase V429_10715 SM00861 Transketolase, pyrimidine binding domain V429_10730 SM00881 CoA binding domain V429_10755 SM00382 ATPases associated with a variety of cellular activities V429_10765 SM00345 helix_turn_helix gluconate operon transcriptional repressor V429_10765 SM00866 V429_10765 V429_10805 SM00859 Semialdehyde dehydrogenase, NAD binding domain V429_10835 SM00822 V429_10835 V429_10840 SM00342 helix_turn_helix, arabinose operon control protein V429_10840 SM00871 Bacterial transcription activator, effector binding domain V429_10870 SM00116 Domain in cystathionine beta-synthase and other proteins. V429_10980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_10980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_10980 SM01049 V429_10980 V429_10990 SM00091 PAS domain V429_10990 SM00387 Histidine kinase-like ATPases V429_10995 SM00448 cheY-homologous receiver domain V429_11015 SM00062 Bacterial periplasmic substrate-binding proteins V429_11030 SM00487 DEAD-like helicases superfamily V429_11030 SM00490 helicase superfamily c-terminal domain V429_11055 SM00345 helix_turn_helix gluconate operon transcriptional repressor V429_11070 SM00763 PrkA AAA domain V429_11075 SM00487 DEAD-like helicases superfamily V429_11075 SM00490 helicase superfamily c-terminal domain V429_11135 SM00387 Histidine kinase-like ATPases V429_11135 SM00388 His Kinase A (phosphoacceptor) domain V429_11135 SM00448 cheY-homologous receiver domain V429_11140 SM00382 ATPases associated with a variety of cellular activities V429_11150 SM00382 ATPases associated with a variety of cellular activities V429_11235 SM01118 V429_11235 V429_11260 SM00487 DEAD-like helicases superfamily V429_11260 SM00490 helicase superfamily c-terminal domain V429_11270 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. V429_11285 SM01144 V429_11285 V429_11310 SM00342 helix_turn_helix, arabinose operon control protein V429_11325 SM00642 Alpha-amylase domain V429_11465 SM00782 PhnA Zinc-Ribbon V429_11480 SM00495 Chitin-binding domain type 3 V429_11495 SM00855 Phosphoglycerate mutase family V429_11500 SM00091 PAS domain V429_11500 SM00267 diguanylate cyclase V429_11510 SM00463 Small MutS-related domain V429_11525 SM00062 Bacterial periplasmic substrate-binding proteins V429_11530 SM00487 DEAD-like helicases superfamily V429_11530 SM00490 helicase superfamily c-terminal domain V429_11535 SM00953 V429_11535 V429_11550 SM00354 helix_turn _helix lactose operon repressor V429_11575 SM00354 helix_turn _helix lactose operon repressor V429_11615 SM00925 MltA specific insert domain V429_11645 SM00434 DNA Topoisomerase IV V429_11660 SM00671 Sel1-like repeats. V429_11665 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain V429_11690 SM00873 B3/4 domain V429_11690 SM00874 tRNA synthetase B5 domain V429_11690 SM00896 Ferredoxin-fold anticodon binding domain V429_11695 SM00411 bacterial (prokaryotic) histone like domain V429_11700 SM00062 Bacterial periplasmic substrate-binding proteins V429_11700 SM00387 Histidine kinase-like ATPases V429_11700 SM00388 His Kinase A (phosphoacceptor) domain V429_11700 SM00448 cheY-homologous receiver domain V429_11730 SM00354 helix_turn _helix lactose operon repressor V429_11750 SM00382 ATPases associated with a variety of cellular activities V429_11785 SM00100 Cyclic nucleotide-monophosphate binding domain V429_11785 SM00419 helix_turn_helix, cAMP Regulatory protein V429_11840 SM00945 ProQ/FINO family V429_11845 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. V429_11845 SM00245 tail specific protease V429_11875 SM00981 V429_11875 V429_11885 SM00382 ATPases associated with a variety of cellular activities V429_11925 SM00822 V429_11925 V429_12015 SM00382 ATPases associated with a variety of cellular activities V429_12035 SM00825 Beta-ketoacyl synthase V429_12045 SM00822 V429_12045 V429_12050 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. V429_12100 SM00363 S4 RNA-binding domain V429_12105 SM00316 Ribosomal protein S1-like RNA-binding domain V429_12145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_12150 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase V429_12180 SM00450 Rhodanese Homology Domain V429_12185 SM00849 Metallo-beta-lactamase superfamily V429_12190 SM00448 cheY-homologous receiver domain V429_12190 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V429_12195 SM00387 Histidine kinase-like ATPases V429_12195 SM00388 His Kinase A (phosphoacceptor) domain V429_12195 SM00448 cheY-homologous receiver domain V429_12210 SM00382 ATPases associated with a variety of cellular activities V429_12210 SM00487 DEAD-like helicases superfamily V429_12210 SM00490 helicase superfamily c-terminal domain V429_12210 SM00847 Helicase associated domain (HA2) Add an annotation V429_12220 SM00116 Domain in cystathionine beta-synthase and other proteins. V429_12225 SM00421 helix_turn_helix, Lux Regulon V429_12245 SM00382 ATPases associated with a variety of cellular activities V429_12280 SM00857 Resolvase, N terminal domain V429_12395 SM00062 Bacterial periplasmic substrate-binding proteins V429_12400 SM00341 Helicase and RNase D C-terminal V429_12400 SM00474 3'-5' exonuclease V429_12425 SM00491 V429_12425 V429_12465 SM00448 cheY-homologous receiver domain V429_12465 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V429_12470 SM00091 PAS domain V429_12475 SM00073 Histidine Phosphotransfer domain V429_12475 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V429_12475 SM00091 PAS domain V429_12475 SM00387 Histidine kinase-like ATPases V429_12475 SM00388 His Kinase A (phosphoacceptor) domain V429_12475 SM00448 cheY-homologous receiver domain V429_12510 SM00237 Domains in Na-Ca exchangers and integrin-beta4 V429_12520 SM01092 CO dehydrogenase flavoprotein C-terminal domain V429_12525 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain V429_12545 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain V429_12550 SM01092 CO dehydrogenase flavoprotein C-terminal domain V429_12625 SM00382 ATPases associated with a variety of cellular activities V429_12660 SM01322 V429_12660 V429_12695 SM00327 von Willebrand factor (vWF) type A domain V429_12700 SM00028 Tetratricopeptide repeats V429_12730 SM00052 Putative diguanylate phosphodiesterase V429_12740 SM00422 helix_turn_helix, mercury resistance V429_12820 SM00347 helix_turn_helix multiple antibiotic resistance protein V429_12890 SM00486 DNA polymerase type-B family V429_12900 SM00267 diguanylate cyclase V429_12910 SM00090 RIO-like kinase V429_12940 SM00518 AP endonuclease family 2 V429_12950 SM00822 V429_12950 V429_12955 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V429_12970 SM00052 Putative diguanylate phosphodiesterase V429_12970 SM00267 diguanylate cyclase V429_12985 SM00267 diguanylate cyclase V429_13035 SM00857 Resolvase, N terminal domain V429_13080 SM00052 Putative diguanylate phosphodiesterase V429_13080 SM00448 cheY-homologous receiver domain V429_13095 SM00885 D5 N terminal like V429_13115 SM00822 V429_13115 V429_13160 SM00878 Biotin carboxylase C-terminal domain V429_13160 SM01209 V429_13160 V429_13170 SM00422 helix_turn_helix, mercury resistance V429_13175 SM00062 Bacterial periplasmic substrate-binding proteins V429_13255 SM00100 Cyclic nucleotide-monophosphate binding domain V429_13255 SM00116 Domain in cystathionine beta-synthase and other proteins. V429_13260 SM00479 V429_13260 V429_13275 SM00382 ATPases associated with a variety of cellular activities V429_13285 SM00411 bacterial (prokaryotic) histone like domain V429_13290 SM00382 ATPases associated with a variety of cellular activities V429_13290 SM00464 Found in ATP-dependent protease La (LON) V429_13295 SM00382 ATPases associated with a variety of cellular activities V429_13295 SM00994 ClpX C4-type zinc finger V429_13295 SM01086 C-terminal, D2-small domain, of ClpB protein V429_13315 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V429_13325 SM00382 ATPases associated with a variety of cellular activities V429_13340 SM00487 DEAD-like helicases superfamily V429_13340 SM00490 helicase superfamily c-terminal domain V429_13340 SM00982 V429_13340 V429_13340 SM01058 CarD-like/TRCF domain V429_13365 SM00855 Phosphoglycerate mutase family V429_13380 SM00369 Leucine-rich repeats, typical (most populated) subfamily V429_13390 SM00342 helix_turn_helix, arabinose operon control protein V429_13475 SM00116 Domain in cystathionine beta-synthase and other proteins. V429_13475 SM01240 V429_13475 V429_13510 SM00729 Elongator protein 3, MiaB family, Radical SAM V429_13515 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_13515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_13535 SM00893 Electron transfer flavoprotein domain V429_13545 SM00893 Electron transfer flavoprotein domain V429_13590 SM00382 ATPases associated with a variety of cellular activities V429_13610 SM00823 Phosphopantetheine attachment site V429_13615 SM00822 V429_13615 V429_13620 SM00823 Phosphopantetheine attachment site V429_13690 SM00387 Histidine kinase-like ATPases V429_13695 SM00493 V429_13695 V429_13705 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V429_13705 SM00382 ATPases associated with a variety of cellular activities V429_13720 SM00926 Molybdopterin oxidoreductase Fe4S4 domain V429_13825 SM00382 ATPases associated with a variety of cellular activities V429_13830 SM00382 ATPases associated with a variety of cellular activities V429_13880 SM00448 cheY-homologous receiver domain V429_13890 SM00073 Histidine Phosphotransfer domain V429_13890 SM00260 Two component signalling adaptor domain V429_13890 SM00387 Histidine kinase-like ATPases V429_13890 SM01231 V429_13890 V429_13895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_13900 SM00260 Two component signalling adaptor domain V429_13905 SM00138 Methyltransferase, chemotaxis proteins V429_13910 SM00448 cheY-homologous receiver domain V429_13915 SM00052 Putative diguanylate phosphodiesterase V429_13915 SM00448 cheY-homologous receiver domain V429_13920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_13920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_13925 SM01005 Alanine racemase, C-terminal domain V429_13930 SM00873 B3/4 domain V429_13935 SM00530 Helix-turn-helix XRE-family like proteins V429_14075 SM00382 ATPases associated with a variety of cellular activities V429_14315 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_14315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_14350 SM01005 Alanine racemase, C-terminal domain V429_14360 SM00382 ATPases associated with a variety of cellular activities V429_14370 SM00382 ATPases associated with a variety of cellular activities V429_14405 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V429_14410 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V429_14415 SM00448 cheY-homologous receiver domain V429_14415 SM00850 LytTr DNA-binding domain V429_14435 SM00487 DEAD-like helicases superfamily V429_14435 SM00490 helicase superfamily c-terminal domain V429_14470 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V429_14470 SM00091 PAS domain V429_14470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_14505 SM00900 V429_14505 V429_14515 SM00478 endonuclease III V429_14515 SM00525 V429_14515 V429_14530 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_14535 SM00479 V429_14535 V429_14545 SM00487 DEAD-like helicases superfamily V429_14545 SM00490 helicase superfamily c-terminal domain V429_14570 SM00116 Domain in cystathionine beta-synthase and other proteins. V429_14570 SM01091 Transporter associated domain V429_14645 SM00267 diguanylate cyclase V429_14650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_14730 SM00859 Semialdehyde dehydrogenase, NAD binding domain V429_14740 SM00014 Acid phosphatase homologues V429_14755 SM00342 helix_turn_helix, arabinose operon control protein V429_14755 SM00871 Bacterial transcription activator, effector binding domain V429_14790 SM01217 V429_14790 V429_14795 SM00342 helix_turn_helix, arabinose operon control protein V429_14855 SM00052 Putative diguanylate phosphodiesterase V429_14855 SM00267 diguanylate cyclase V429_14875 SM00382 ATPases associated with a variety of cellular activities V429_14880 SM00729 Elongator protein 3, MiaB family, Radical SAM V429_14900 SM00382 ATPases associated with a variety of cellular activities V429_14910 SM00062 Bacterial periplasmic substrate-binding proteins V429_14925 SM00422 helix_turn_helix, mercury resistance V429_14940 SM01351 V429_14940 V429_14950 SM00487 DEAD-like helicases superfamily V429_14950 SM00490 helicase superfamily c-terminal domain V429_14965 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V429_14985 SM00917 LeuA allosteric (dimerisation) domain V429_14990 SM00851 MGS-like domain V429_14990 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain V429_14995 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain V429_15045 SM00382 ATPases associated with a variety of cellular activities V429_15055 SM00062 Bacterial periplasmic substrate-binding proteins V429_15065 SM00382 ATPases associated with a variety of cellular activities V429_15090 SM00899 V429_15090 V429_15120 SM00062 Bacterial periplasmic substrate-binding proteins V429_15125 SM00062 Bacterial periplasmic substrate-binding proteins V429_15130 SM00267 diguanylate cyclase V429_15150 SM00840 V429_15150 V429_15285 SM00382 ATPases associated with a variety of cellular activities V429_15380 SM00278 Helix-hairpin-helix DNA-binding motif class 1 V429_15380 SM00465 GIY-YIG type nucleases (URI domain) V429_15385 SM00421 helix_turn_helix, Lux Regulon V429_15385 SM00448 cheY-homologous receiver domain V429_15405 SM00382 ATPases associated with a variety of cellular activities V429_15440 SM00528 Domain in histone-like proteins of HNS family V429_15580 SM00491 V429_15580 V429_15605 SM00098 Alkaline phosphatase homologues V429_15610 SM00098 Alkaline phosphatase homologues V429_15630 SM00421 helix_turn_helix, Lux Regulon V429_15630 SM00448 cheY-homologous receiver domain V429_15635 SM00387 Histidine kinase-like ATPases V429_15645 SM00267 diguanylate cyclase V429_15650 SM00062 Bacterial periplasmic substrate-binding proteins V429_15650 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. V429_15660 SM00382 ATPases associated with a variety of cellular activities V429_15690 SM01091 Transporter associated domain V429_15705 SM00382 ATPases associated with a variety of cellular activities V429_15775 SM00382 ATPases associated with a variety of cellular activities V429_15775 SM00448 cheY-homologous receiver domain V429_15780 SM00091 PAS domain V429_15780 SM00387 Histidine kinase-like ATPases V429_15780 SM00388 His Kinase A (phosphoacceptor) domain V429_15785 SM00382 ATPases associated with a variety of cellular activities V429_15810 SM00116 Domain in cystathionine beta-synthase and other proteins. V429_15810 SM00924 MgtE intracellular N domain V429_15825 SM00047 Lysozyme subfamily 2 V429_15870 SM00138 Methyltransferase, chemotaxis proteins V429_15875 SM00260 Two component signalling adaptor domain V429_15875 SM00448 cheY-homologous receiver domain V429_15880 SM00858 V429_15880 V429_15910 SM00363 S4 RNA-binding domain V429_15915 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V429_15940 SM00420 helix_turn_helix, Deoxyribose operon repressor V429_15940 SM01134 V429_15940 V429_15975 SM00357 Cold shock protein domain V429_15985 SM00861 Transketolase, pyrimidine binding domain V429_16010 SM00487 DEAD-like helicases superfamily V429_16010 SM00490 helicase superfamily c-terminal domain V429_16170 SM00363 S4 RNA-binding domain V429_16190 SM00481 DNA polymerase alpha chain like domain V429_16250 SM00247 Beta/gamma crystallins V429_16340 SM00530 Helix-turn-helix XRE-family like proteins V429_16440 SM00448 cheY-homologous receiver domain V429_16440 SM00862 Transcriptional regulatory protein, C terminal V429_16455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_16455 SM00387 Histidine kinase-like ATPases V429_16455 SM00388 His Kinase A (phosphoacceptor) domain V429_16455 SM00448 cheY-homologous receiver domain V429_16535 SM00028 Tetratricopeptide repeats V429_16535 SM00448 cheY-homologous receiver domain V429_16595 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V429_16595 SM00091 PAS domain V429_16595 SM00267 diguanylate cyclase V429_16620 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor V429_16640 SM00354 helix_turn _helix lactose operon repressor V429_16645 SM00640 Glycosyl hydrolases family 32 V429_16665 SM00271 DnaJ molecular chaperone homology domain V429_16695 SM01131 V429_16695 V429_16710 SM00382 ATPases associated with a variety of cellular activities V429_16730 SM00528 Domain in histone-like proteins of HNS family V429_16750 SM00530 Helix-turn-helix XRE-family like proteins V429_16810 SM00062 Bacterial periplasmic substrate-binding proteins V429_16810 SM00387 Histidine kinase-like ATPases V429_16810 SM00388 His Kinase A (phosphoacceptor) domain V429_16810 SM00448 cheY-homologous receiver domain V429_16810 SM00918 Ligated ion channel L-glutamate- and glycine-binding site V429_16845 SM00382 ATPases associated with a variety of cellular activities V429_16915 SM00448 cheY-homologous receiver domain V429_16915 SM00862 Transcriptional regulatory protein, C terminal V429_16930 SM00382 ATPases associated with a variety of cellular activities V429_16935 SM00382 ATPases associated with a variety of cellular activities V429_16970 SM00382 ATPases associated with a variety of cellular activities V429_16995 SM00267 diguanylate cyclase V429_17100 SM00919 Malic enzyme, NAD binding domain V429_17100 SM01274 V429_17100 V429_17105 SM00387 Histidine kinase-like ATPases V429_17105 SM00448 cheY-homologous receiver domain V429_17120 SM00926 Molybdopterin oxidoreductase Fe4S4 domain V429_17170 SM00387 Histidine kinase-like ATPases V429_17170 SM00388 His Kinase A (phosphoacceptor) domain V429_17175 SM00382 ATPases associated with a variety of cellular activities V429_17175 SM00448 cheY-homologous receiver domain V429_17190 SM00382 ATPases associated with a variety of cellular activities V429_17200 SM00852 Probable molybdopterin binding domain V429_17210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V429_17220 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V429_17220 SM00091 PAS domain V429_17220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_17270 SM00091 PAS domain V429_17270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_17270 SM00387 Histidine kinase-like ATPases V429_17270 SM00388 His Kinase A (phosphoacceptor) domain V429_17270 SM00448 cheY-homologous receiver domain V429_17290 SM00382 ATPases associated with a variety of cellular activities V429_17295 SM00382 ATPases associated with a variety of cellular activities V429_17335 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain V429_17335 SM00437 Bacterial DNA topoisomerase I DNA-binding domain V429_17335 SM00493 V429_17335 V429_17380 SM00788 Adenylosuccinate synthetase V429_17390 SM00342 helix_turn_helix, arabinose operon control protein V429_17400 SM00363 S4 RNA-binding domain V429_17460 SM00861 Transketolase, pyrimidine binding domain V429_17470 SM00731 SprT homologues. V429_17490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_17500 SM00732 Likely ribonuclease with RNase H fold. V429_17525 SM00460 Transglutaminase/protease-like homologues V429_17550 SM00986 Uracil DNA glycosylase superfamily V429_17550 SM00987 UreE urease accessory protein, C-terminal domain V429_17585 SM00937 V429_17585 V429_17610 SM01400 V429_17610 V429_17685 SM00100 Cyclic nucleotide-monophosphate binding domain V429_17690 SM01022 V429_17690 V429_17700 SM00642 Alpha-amylase domain V429_17710 SM00890 Domain of unknown function V429_17725 SM01150 V429_17725 V429_17790 SM00965 Secretin and TonB N terminus short domain V429_17810 SM00842 Cell division protein FtsA V429_17825 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_17825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_17835 SM00849 Metallo-beta-lactamase superfamily V429_17875 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_17875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_17935 SM01236 V429_17935 V429_17940 SM00822 V429_17940 V429_17950 SM00448 cheY-homologous receiver domain V429_17950 SM00862 Transcriptional regulatory protein, C terminal V429_17955 SM00387 Histidine kinase-like ATPases V429_17955 SM00388 His Kinase A (phosphoacceptor) domain V429_17965 SM01240 V429_17965 V429_17975 SM00841 Elongation factor P, C-terminal V429_17975 SM01185 V429_17975 V429_18000 SM00267 diguanylate cyclase V429_18025 SM00267 diguanylate cyclase V429_18030 SM00357 Cold shock protein domain V429_18045 SM00729 Elongator protein 3, MiaB family, Radical SAM V429_18060 SM00116 Domain in cystathionine beta-synthase and other proteins. V429_18060 SM01091 Transporter associated domain V429_18130 SM00936 Penicillin-binding protein 5, C-terminal domain V429_18150 SM00729 Elongator protein 3, MiaB family, Radical SAM V429_18180 SM00422 helix_turn_helix, mercury resistance V429_18260 SM00926 Molybdopterin oxidoreductase Fe4S4 domain V429_18275 SM00387 Histidine kinase-like ATPases V429_18275 SM00388 His Kinase A (phosphoacceptor) domain V429_18280 SM00421 helix_turn_helix, Lux Regulon V429_18280 SM00448 cheY-homologous receiver domain V429_18290 SM00448 cheY-homologous receiver domain V429_18290 SM00850 LytTr DNA-binding domain V429_18320 SM00267 diguanylate cyclase V429_18330 SM00316 Ribosomal protein S1-like RNA-binding domain V429_18330 SM00322 K homology RNA-binding domain V429_18335 SM01387 V429_18335 V429_18355 SM00316 Ribosomal protein S1-like RNA-binding domain V429_18395 SM00382 ATPases associated with a variety of cellular activities V429_18405 SM01103 V429_18405 V429_18440 SM00861 Transketolase, pyrimidine binding domain V429_18460 SM00382 ATPases associated with a variety of cellular activities V429_18555 SM00052 Putative diguanylate phosphodiesterase V429_18555 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V429_18555 SM00091 PAS domain V429_18555 SM00267 diguanylate cyclase V429_18585 SM00878 Biotin carboxylase C-terminal domain V429_18610 SM00829 Enoylreductase V429_18625 SM01266 V429_18625 V429_18655 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain V429_18665 SM00870 V429_18665 V429_18675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_18675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_18680 SM00937 V429_18680 V429_18720 SM00382 ATPases associated with a variety of cellular activities V429_18745 SM00852 Probable molybdopterin binding domain V429_18755 SM00825 Beta-ketoacyl synthase V429_18760 SM00822 V429_18760 V429_18770 SM00825 Beta-ketoacyl synthase V429_18830 SM00563 Phosphate acyltransferases V429_18855 SM00477 DNA/RNA non-specific endonuclease V429_18855 SM00892 DNA/RNA non-specific endonuclease V429_18865 SM01057 Eukaryotic-type carbonic anhydrase V429_18890 SM00382 ATPases associated with a variety of cellular activities V429_18905 SM01012 V429_18905 V429_18915 SM00926 Molybdopterin oxidoreductase Fe4S4 domain V429_18945 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase V429_18975 SM00382 ATPases associated with a variety of cellular activities V429_18980 SM00382 ATPases associated with a variety of cellular activities V429_19030 SM00028 Tetratricopeptide repeats V429_19035 SM00495 Chitin-binding domain type 3 V429_19035 SM00636 V429_19035 V429_19080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_19080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_19090 SM00357 Cold shock protein domain V429_19120 SM00479 V429_19120 V429_19155 SM00052 Putative diguanylate phosphodiesterase V429_19155 SM00091 PAS domain V429_19155 SM00267 diguanylate cyclase V429_19190 SM00382 ATPases associated with a variety of cellular activities V429_19205 SM00450 Rhodanese Homology Domain V429_19235 SM00052 Putative diguanylate phosphodiesterase V429_19250 SM00382 ATPases associated with a variety of cellular activities V429_19260 SM00260 Two component signalling adaptor domain V429_19260 SM00448 cheY-homologous receiver domain V429_19300 SM00278 Helix-hairpin-helix DNA-binding motif class 1 V429_19315 SM00448 cheY-homologous receiver domain V429_19325 SM00382 ATPases associated with a variety of cellular activities V429_19425 SM00014 Acid phosphatase homologues V429_19435 SM00448 cheY-homologous receiver domain V429_19435 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V429_19465 SM00487 DEAD-like helicases superfamily V429_19465 SM00490 helicase superfamily c-terminal domain V429_19465 SM00847 Helicase associated domain (HA2) Add an annotation V429_19510 SM00450 Rhodanese Homology Domain V429_19540 SM00382 ATPases associated with a variety of cellular activities V429_19595 SM00382 ATPases associated with a variety of cellular activities V429_19615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_19660 SM00244 prohibitin homologues V429_19670 SM00116 Domain in cystathionine beta-synthase and other proteins. V429_19675 SM00382 ATPases associated with a variety of cellular activities V429_19785 SM00345 helix_turn_helix gluconate operon transcriptional repressor V429_19850 SM00344 helix_turn_helix ASNC type V429_19865 SM00347 helix_turn_helix multiple antibiotic resistance protein V429_19875 SM00829 Enoylreductase V429_19895 SM00642 Alpha-amylase domain V429_19900 SM00642 Alpha-amylase domain V429_19910 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain V429_19925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_19925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_20025 SM00382 ATPases associated with a variety of cellular activities V429_20030 SM00278 Helix-hairpin-helix DNA-binding motif class 1 V429_20035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_20035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_20100 SM01152 V429_20100 V429_20120 SM00382 ATPases associated with a variety of cellular activities V429_20135 SM00487 DEAD-like helicases superfamily V429_20135 SM00490 helicase superfamily c-terminal domain V429_20185 SM00411 bacterial (prokaryotic) histone like domain V429_20200 SM00382 ATPases associated with a variety of cellular activities V429_20225 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V429_20225 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V429_20225 SM00091 PAS domain V429_20225 SM00267 diguanylate cyclase V429_20240 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain V429_20245 SM01133 V429_20245 V429_20315 SM00530 Helix-turn-helix XRE-family like proteins V429_20560 SM01091 Transporter associated domain V429_20615 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain V429_20625 SM00382 ATPases associated with a variety of cellular activities V429_20650 SM00533 DNA-binding domain of DNA mismatch repair MUTS family V429_20650 SM00534 ATPase domain of DNA mismatch repair MUTS family V429_20665 SM00347 helix_turn_helix multiple antibiotic resistance protein V429_20705 SM00382 ATPases associated with a variety of cellular activities V429_20725 SM00986 Uracil DNA glycosylase superfamily V429_20725 SM00987 UreE urease accessory protein, C-terminal domain V429_20760 SM00563 Phosphate acyltransferases V429_20790 SM00271 DnaJ molecular chaperone homology domain V429_20825 SM00434 DNA Topoisomerase IV V429_20830 SM00387 Histidine kinase-like ATPases V429_20830 SM00433 TopoisomeraseII V429_20900 SM01118 V429_20900 V429_20925 SM00450 Rhodanese Homology Domain V429_20935 SM00345 helix_turn_helix gluconate operon transcriptional repressor V429_20965 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. V429_20975 SM00382 ATPases associated with a variety of cellular activities V429_20985 SM00478 endonuclease III V429_20985 SM00525 V429_20985 V429_21010 SM00062 Bacterial periplasmic substrate-binding proteins V429_21050 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V429_21050 SM00267 diguanylate cyclase V429_21055 SM01130 V429_21055 V429_21125 SM00382 ATPases associated with a variety of cellular activities V429_21155 SM00344 helix_turn_helix ASNC type V429_21160 SM01266 V429_21160 V429_21165 SM00642 Alpha-amylase domain V429_21175 SM00354 helix_turn _helix lactose operon repressor V429_21190 SM00870 V429_21190 V429_21205 SM00851 MGS-like domain V429_21240 SM00260 Two component signalling adaptor domain V429_21240 SM00448 cheY-homologous receiver domain V429_21285 SM01207 V429_21285 V429_21290 SM00905 Dihydroneopterin aldolase V429_21310 SM00833 Cobalamin synthesis protein cobW C-terminal domain V429_21345 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_21345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_21350 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_21360 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. V429_21360 SM00267 diguanylate cyclase V429_21380 SM00345 helix_turn_helix gluconate operon transcriptional repressor V429_21380 SM00895 V429_21380 V429_21385 SM00644 V429_21385 V429_21445 SM00957 SecA DEAD-like domain V429_21445 SM00958 SecA preprotein cross-linking domain V429_21460 SM00864 Tubulin/FtsZ family, GTPase domain V429_21460 SM00865 Tubulin/FtsZ family, C-terminal domain V429_21465 SM00842 Cell division protein FtsA V429_21550 SM00749 bacterial OsmY and nodulation domain V429_21600 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. V429_21605 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. V429_21680 SM00382 ATPases associated with a variety of cellular activities V429_21700 SM00116 Domain in cystathionine beta-synthase and other proteins. V429_21705 SM00382 ATPases associated with a variety of cellular activities V429_21790 SM00530 Helix-turn-helix XRE-family like proteins V429_21825 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_21825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_21850 SM00421 helix_turn_helix, Lux Regulon V429_21860 SM00062 Bacterial periplasmic substrate-binding proteins V429_21880 SM00357 Cold shock protein domain V429_21890 SM00062 Bacterial periplasmic substrate-binding proteins V429_21890 SM00267 diguanylate cyclase V429_21895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_21895 SM00387 Histidine kinase-like ATPases V429_21895 SM00388 His Kinase A (phosphoacceptor) domain V429_21900 SM00448 cheY-homologous receiver domain V429_21900 SM00862 Transcriptional regulatory protein, C terminal V429_21925 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) V429_21925 SM00091 PAS domain V429_21925 SM00267 diguanylate cyclase V429_21980 SM00530 Helix-turn-helix XRE-family like proteins V429_21985 SM00345 helix_turn_helix gluconate operon transcriptional repressor V429_21985 SM00866 V429_21985 V429_22010 SM00382 ATPases associated with a variety of cellular activities V429_22020 SM00267 diguanylate cyclase V429_22035 SM00342 helix_turn_helix, arabinose operon control protein V429_22035 SM00871 Bacterial transcription activator, effector binding domain V429_22045 SM01060 V429_22045 V429_22070 SM00014 Acid phosphatase homologues V429_22080 SM00822 V429_22080 V429_22095 SM00091 PAS domain V429_22110 SM01120 V429_22110 V429_22170 SM00838 Elongation factor G C-terminus V429_22170 SM00889 Elongation factor G, domain IV V429_22210 SM01126 V429_22210 V429_22215 SM00663 RNA polymerase I subunit A N-terminus V429_22240 SM00649 Ribosomal protein L11/L12 V429_22245 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. V429_22245 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. V429_22300 SM00342 helix_turn_helix, arabinose operon control protein V429_22315 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain V429_22315 SM00437 Bacterial DNA topoisomerase I DNA-binding domain V429_22315 SM00493 V429_22315 V429_22335 SM00387 Histidine kinase-like ATPases V429_22340 SM00448 cheY-homologous receiver domain V429_22340 SM00862 Transcriptional regulatory protein, C terminal V429_22375 SM00382 ATPases associated with a variety of cellular activities V429_22375 SM00448 cheY-homologous receiver domain V429_22385 SM00387 Histidine kinase-like ATPases V429_22385 SM00388 His Kinase A (phosphoacceptor) domain V429_22405 SM00116 Domain in cystathionine beta-synthase and other proteins. V429_22415 SM00062 Bacterial periplasmic substrate-binding proteins V429_22420 SM00344 helix_turn_helix ASNC type V429_22430 SM00849 Metallo-beta-lactamase superfamily V429_22435 SM00382 ATPases associated with a variety of cellular activities V429_22435 SM01086 C-terminal, D2-small domain, of ClpB protein V429_22445 SM00363 S4 RNA-binding domain V429_22485 SM01002 Alanine dehydrogenase/PNT, C-terminal domain V429_22485 SM01003 Alanine dehydrogenase/PNT, N-terminal domain V429_22495 SM00342 helix_turn_helix, arabinose operon control protein V429_22505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_22505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_22575 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_22575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_22585 SM00382 ATPases associated with a variety of cellular activities V429_22595 SM01038 Beta galactosidase small chain V429_22600 SM00354 helix_turn _helix lactose operon repressor V429_22645 SM00464 Found in ATP-dependent protease La (LON) V429_22650 SM00836 DALR anticodon binding domain V429_22650 SM01016 Arginyl tRNA synthetase N terminal dom V429_22665 SM00382 ATPases associated with a variety of cellular activities V429_22665 SM01086 C-terminal, D2-small domain, of ClpB protein V429_22705 SM00924 MgtE intracellular N domain V429_22710 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). V429_22710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_22710 SM01358 V429_22710 V429_22745 SM00341 Helicase and RNase D C-terminal V429_22745 SM00487 DEAD-like helicases superfamily V429_22745 SM00490 helicase superfamily c-terminal domain V429_22745 SM00956 V429_22745 V429_22780 SM00382 ATPases associated with a variety of cellular activities V429_22800 SM01230 V429_22800 V429_22845 SM00642 Alpha-amylase domain V429_22865 SM00448 cheY-homologous receiver domain V429_22865 SM00862 Transcriptional regulatory protein, C terminal V429_22870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain V429_22870 SM00387 Histidine kinase-like ATPases V429_22870 SM00388 His Kinase A (phosphoacceptor) domain V429_22880 SM00919 Malic enzyme, NAD binding domain V429_22880 SM01274 V429_22880 V429_22895 SM00487 DEAD-like helicases superfamily V429_22895 SM00490 helicase superfamily c-terminal domain V429_22935 SM00382 ATPases associated with a variety of cellular activities V429_22940 SM00563 Phosphate acyltransferases V429_22945 SM00563 Phosphate acyltransferases V429_22970 SM00062 Bacterial periplasmic substrate-binding proteins V429_22975 SM00382 ATPases associated with a variety of cellular activities V429_23005 SM00267 diguanylate cyclase V429_23010 SM00422 helix_turn_helix, mercury resistance V429_23080 SM00829 Enoylreductase V429_23090 SM00052 Putative diguanylate phosphodiesterase V429_23090 SM00267 diguanylate cyclase V429_23170 SM00421 helix_turn_helix, Lux Regulon V429_23180 SM00420 helix_turn_helix, Deoxyribose operon repressor V429_23180 SM01134 V429_23180 V429_23185 SM00448 cheY-homologous receiver domain V429_23185 SM00862 Transcriptional regulatory protein, C terminal V429_23190 SM00387 Histidine kinase-like ATPases V429_23190 SM00388 His Kinase A (phosphoacceptor) domain V429_23215 SM00382 ATPases associated with a variety of cellular activities V429_23255 SM00470 ParB-like nuclease domain V429_23270 SM01228 V429_23270 V429_23285 SM00382 ATPases associated with a variety of cellular activities V429_23290 SM00382 ATPases associated with a variety of cellular activities V429_23325 SM00382 ATPases associated with a variety of cellular activities V429_23335 SM00062 Bacterial periplasmic substrate-binding proteins V429_23335 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins.