locus-tag class description JUNP479_0005 PF00717 Peptidase S24-like JUNP479_0006 PF13438 Domain of unknown function (DUF4113) JUNP479_0006 PF11799 impB/mucB/samB family C-terminal domain JUNP479_0006 PF00817 impB/mucB/samB family JUNP479_0008 PF08450 SMP-30/Gluconolactonase/LRE-like region JUNP479_0008 PF00069 Protein kinase domain JUNP479_0008 PF01436 NHL repeat JUNP479_0016 PF06892 Phage regulatory protein CII (CP76) JUNP479_0019 PF00717 Peptidase S24-like JUNP479_0022 PF00589 Phage integrase family JUNP479_0022 PF02899 Phage integrase, N-terminal SAM-like domain JUNP479_0024 PF01970 Tripartite tricarboxylate transporter TctA family JUNP479_0027 PF00486 Transcriptional regulatory protein, C terminal JUNP479_0027 PF00072 Response regulator receiver domain JUNP479_0028 PF08521 Two-component sensor kinase N-terminal JUNP479_0028 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_0028 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_0029 PF04226 Transglycosylase associated protein JUNP479_0030 PF00672 HAMP domain JUNP479_0030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_0031 PF00149 Calcineurin-like phosphoesterase JUNP479_0032 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JUNP479_0033 PF09190 DALR domain JUNP479_0033 PF01406 tRNA synthetases class I (C) catalytic domain JUNP479_0037 PF01979 Amidohydrolase family JUNP479_0044 PF01169 Uncharacterized protein family UPF0016 JUNP479_0045 PF01253 Translation initiation factor SUI1 JUNP479_0047 PF07664 Ferrous iron transport protein B C terminus JUNP479_0047 PF07670 Nucleoside recognition JUNP479_0047 PF02421 Ferrous iron transport protein B JUNP479_0047 PF17910 FeoB cytosolic helical domain JUNP479_0050 PF00271 Helicase conserved C-terminal domain JUNP479_0050 PF00270 DEAD/DEAH box helicase JUNP479_0053 PF00497 Bacterial extracellular solute-binding proteins, family 3 JUNP479_0054 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_0055 PF00005 ABC transporter JUNP479_0056 PF07992 Pyridine nucleotide-disulphide oxidoreductase JUNP479_0056 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JUNP479_0057 PF00310 Glutamine amidotransferases class-II JUNP479_0057 PF04898 Glutamate synthase central domain JUNP479_0057 PF01493 GXGXG motif JUNP479_0057 PF01645 Conserved region in glutamate synthase JUNP479_0058 PF16199 Radical_SAM C-terminal domain JUNP479_0058 PF04055 Radical SAM superfamily JUNP479_0059 PF00664 ABC transporter transmembrane region JUNP479_0059 PF00005 ABC transporter JUNP479_0059 PF03412 Peptidase C39 family JUNP479_0067 PF07992 Pyridine nucleotide-disulphide oxidoreductase JUNP479_0067 PF13192 Thioredoxin domain JUNP479_0068 PF00578 AhpC/TSA family JUNP479_0068 PF10417 C-terminal domain of 1-Cys peroxiredoxin JUNP479_0069 PF00005 ABC transporter JUNP479_0069 PF00571 CBS domain JUNP479_0070 PF02547 Queuosine biosynthesis protein JUNP479_0071 PF01702 Queuine tRNA-ribosyltransferase JUNP479_0072 PF02699 Preprotein translocase subunit JUNP479_0073 PF02355 Protein export membrane protein JUNP479_0073 PF13721 SecD export protein N-terminal TM region JUNP479_0073 PF07549 SecD/SecF GG Motif JUNP479_0074 PF07549 SecD/SecF GG Motif JUNP479_0074 PF02355 Protein export membrane protein JUNP479_0076 PF07719 Tetratricopeptide repeat JUNP479_0076 PF13181 Tetratricopeptide repeat JUNP479_0077 PF01136 Peptidase family U32 JUNP479_0078 PF01136 Peptidase family U32 JUNP479_0079 PF02036 SCP-2 sterol transfer family JUNP479_0081 PF00588 SpoU rRNA Methylase family JUNP479_0082 PF02082 Transcriptional regulator JUNP479_0083 PF00266 Aminotransferase class-V JUNP479_0084 PF01592 NifU-like N terminal domain JUNP479_0085 PF01521 Iron-sulphur cluster biosynthesis JUNP479_0086 PF07743 HSCB C-terminal oligomerisation domain JUNP479_0087 PF00012 Hsp70 protein JUNP479_0088 PF00111 2Fe-2S iron-sulfur cluster binding domain JUNP479_0089 PF00883 Cytosol aminopeptidase family, catalytic domain JUNP479_0089 PF12404 Peptidase JUNP479_0090 PF00883 Cytosol aminopeptidase family, catalytic domain JUNP479_0090 PF12404 Peptidase JUNP479_0091 PF00334 Nucleoside diphosphate kinase JUNP479_0092 PF04055 Radical SAM superfamily JUNP479_0094 PF13464 Domain of unknown function (DUF4115) JUNP479_0095 PF04551 GcpE protein JUNP479_0096 PF03129 Anticodon binding domain JUNP479_0096 PF13393 Histidyl-tRNA synthetase JUNP479_0097 PF09976 Tetratricopeptide repeat-like domain JUNP479_0098 PF13360 PQQ-like domain JUNP479_0099 PF01926 50S ribosome-binding GTPase JUNP479_0099 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JUNP479_0100 PF07191 zinc-ribbons JUNP479_0101 PF00497 Bacterial extracellular solute-binding proteins, family 3 JUNP479_0101 PF01464 Transglycosylase SLT domain JUNP479_0102 PF02769 AIR synthase related protein, C-terminal domain JUNP479_0102 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JUNP479_0102 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JUNP479_0103 PF00361 Proton-conducting membrane transporter JUNP479_0104 PF00361 Proton-conducting membrane transporter JUNP479_0105 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JUNP479_0105 PF00361 Proton-conducting membrane transporter JUNP479_0106 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JUNP479_0107 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JUNP479_0108 PF12838 4Fe-4S dicluster domain JUNP479_0109 PF00146 NADH dehydrogenase JUNP479_0110 PF00384 Molybdopterin oxidoreductase JUNP479_0110 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JUNP479_0110 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JUNP479_0111 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JUNP479_0111 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JUNP479_0113 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JUNP479_0113 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JUNP479_0114 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JUNP479_0115 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JUNP479_0116 PF00691 OmpA family JUNP479_0116 PF13677 Membrane MotB of proton-channel complex MotA/MotB JUNP479_0117 PF01618 MotA/TolQ/ExbB proton channel family JUNP479_0120 PF04536 TPM domain JUNP479_0122 PF03411 Penicillin-insensitive murein endopeptidase JUNP479_0123 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_0124 PF00497 Bacterial extracellular solute-binding proteins, family 3 JUNP479_0125 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_0126 PF00005 ABC transporter JUNP479_0128 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JUNP479_0129 PF00248 Aldo/keto reductase family JUNP479_0131 PF00106 short chain dehydrogenase JUNP479_0132 PF01212 Beta-eliminating lyase JUNP479_0134 PF00072 Response regulator receiver domain JUNP479_0135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_0135 PF03466 LysR substrate binding domain JUNP479_0136 PF13188 PAS domain JUNP479_0136 PF03707 Bacterial signalling protein N terminal repeat JUNP479_0136 PF00563 EAL domain JUNP479_0136 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_0137 PF03806 AbgT putative transporter family JUNP479_0138 PF00881 Nitroreductase family JUNP479_0141 PF07690 Major Facilitator Superfamily JUNP479_0142 PF03466 LysR substrate binding domain JUNP479_0142 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_0143 PF03466 LysR substrate binding domain JUNP479_0143 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_0144 PF00925 GTP cyclohydrolase II JUNP479_0145 PF02224 Cytidylate kinase JUNP479_0146 PF00575 S1 RNA binding domain JUNP479_0147 PF00216 Bacterial DNA-binding protein JUNP479_0149 PF18073 Rubredoxin metal binding domain JUNP479_0150 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JUNP479_0153 PF06508 Queuosine biosynthesis protein QueC JUNP479_0154 PF04055 Radical SAM superfamily JUNP479_0155 PF12843 Putative quorum-sensing-regulated virulence factor JUNP479_0156 PF01923 Cobalamin adenosyltransferase JUNP479_0157 PF00816 H-NS histone family JUNP479_0158 PF03553 Na+/H+ antiporter family JUNP479_0159 PF00265 Thymidine kinase JUNP479_0162 PF10722 Putative bacterial sensory transduction regulator JUNP479_0164 PF05638 Type VI secretion system effector, Hcp JUNP479_0165 PF04717 Type VI secretion system, phage-baseplate injector JUNP479_0168 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JUNP479_0170 PF05947 Type VI secretion system, TssF JUNP479_0174 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE JUNP479_0176 PF07724 AAA domain (Cdc48 subfamily) JUNP479_0176 PF00004 ATPase family associated with various cellular activities (AAA) JUNP479_0176 PF10431 C-terminal, D2-small domain, of ClpB protein JUNP479_0176 PF17871 AAA lid domain JUNP479_0177 PF00158 Sigma-54 interaction domain JUNP479_0177 PF02954 Bacterial regulatory protein, Fis family JUNP479_0180 PF06761 Intracellular multiplication and human macrophage-killing JUNP479_0180 PF14331 ImcF-related N-terminal domain JUNP479_0180 PF06744 Type VI secretion protein IcmF C-terminal JUNP479_0183 PF04717 Type VI secretion system, phage-baseplate injector JUNP479_0184 PF13503 Domain of unknown function (DUF4123) JUNP479_0188 PF13662 Toprim domain JUNP479_0188 PF02132 RecR protein JUNP479_0189 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_0189 PF00183 Hsp90 protein JUNP479_0190 PF00005 ABC transporter JUNP479_0191 PF00005 ABC transporter JUNP479_0191 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JUNP479_0192 PF12911 N-terminal TM domain of oligopeptide transport permease C JUNP479_0192 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_0193 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_0194 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JUNP479_0195 PF00158 Sigma-54 interaction domain JUNP479_0195 PF02954 Bacterial regulatory protein, Fis family JUNP479_0196 PF04012 PspA/IM30 family JUNP479_0197 PF06667 Phage shock protein B JUNP479_0199 PF04317 YcjX-like family, DUF463 JUNP479_0200 PF05128 Domain of unknown function (DUF697) JUNP479_0201 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JUNP479_0202 PF01329 Pterin 4 alpha carbinolamine dehydratase JUNP479_0203 PF18024 Helix-turn-helix domain JUNP479_0203 PF00158 Sigma-54 interaction domain JUNP479_0205 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_0205 PF17152 Periplasmic sensor domain JUNP479_0206 PF00691 OmpA family JUNP479_0207 PF03741 Integral membrane protein TerC family JUNP479_0209 PF08891 YfcL protein JUNP479_0210 PF00501 AMP-binding enzyme JUNP479_0211 PF01053 Cys/Met metabolism PLP-dependent enzyme JUNP479_0213 PF13460 NAD(P)H-binding JUNP479_0214 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_0214 PF03466 LysR substrate binding domain JUNP479_0216 PF02678 Pirin JUNP479_0216 PF05726 Pirin C-terminal cupin domain JUNP479_0217 PF00857 Isochorismatase family JUNP479_0218 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_0218 PF03466 LysR substrate binding domain JUNP479_0219 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_0219 PF03466 LysR substrate binding domain JUNP479_0220 PF01717 Cobalamin-independent synthase, Catalytic domain JUNP479_0220 PF08267 Cobalamin-independent synthase, N-terminal domain JUNP479_0224 PF03466 LysR substrate binding domain JUNP479_0224 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_0225 PF00232 Glycosyl hydrolase family 1 JUNP479_0226 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding JUNP479_0226 PF18381 YcaO cyclodehydratase C-terminal domain JUNP479_0228 PF01226 Formate/nitrite transporter JUNP479_0229 PF01228 Glycine radical JUNP479_0229 PF02901 Pyruvate formate lyase-like JUNP479_0231 PF03692 Putative zinc- or iron-chelating domain JUNP479_0234 PF00343 Carbohydrate phosphorylase JUNP479_0235 PF00939 Sodium:sulfate symporter transmembrane region JUNP479_0236 PF00085 Thioredoxin JUNP479_0237 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JUNP479_0237 PF01627 Hpt domain JUNP479_0237 PF00672 HAMP domain JUNP479_0237 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_0237 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_0237 PF00072 Response regulator receiver domain JUNP479_0238 PF00664 ABC transporter transmembrane region JUNP479_0238 PF00005 ABC transporter JUNP479_0239 PF00664 ABC transporter transmembrane region JUNP479_0239 PF00005 ABC transporter JUNP479_0244 PF08543 Phosphomethylpyrimidine kinase JUNP479_0245 PF00465 Iron-containing alcohol dehydrogenase JUNP479_0246 PF13673 Acetyltransferase (GNAT) domain JUNP479_0248 PF01928 CYTH domain JUNP479_0251 PF13673 Acetyltransferase (GNAT) domain JUNP479_0253 PF00285 Citrate synthase, C-terminal domain JUNP479_0255 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JUNP479_0256 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JUNP479_0257 PF00890 FAD binding domain JUNP479_0257 PF02910 Fumarate reductase flavoprotein C-term JUNP479_0258 PF13085 2Fe-2S iron-sulfur cluster binding domain JUNP479_0259 PF16078 2-oxoglutarate dehydrogenase N-terminus JUNP479_0259 PF02779 Transketolase, pyrimidine binding domain JUNP479_0259 PF00676 Dehydrogenase E1 component JUNP479_0259 PF16870 2-oxoglutarate dehydrogenase C-terminal JUNP479_0260 PF02817 e3 binding domain JUNP479_0260 PF00364 Biotin-requiring enzyme JUNP479_0260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JUNP479_0261 PF00549 CoA-ligase JUNP479_0261 PF08442 ATP-grasp domain JUNP479_0262 PF02629 CoA binding domain JUNP479_0262 PF00549 CoA-ligase JUNP479_0264 PF00106 short chain dehydrogenase JUNP479_0265 PF07969 Amidohydrolase family JUNP479_0267 PF01266 FAD dependent oxidoreductase JUNP479_0268 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_0269 PF00005 ABC transporter JUNP479_0272 PF07702 UTRA domain JUNP479_0272 PF00392 Bacterial regulatory proteins, gntR family JUNP479_0273 PF00266 Aminotransferase class-V JUNP479_0274 PF00202 Aminotransferase class-III JUNP479_0276 PF03918 Cytochrome C biogenesis protein JUNP479_0277 PF08534 Redoxin JUNP479_0278 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JUNP479_0278 PF01578 Cytochrome C assembly protein JUNP479_0279 PF03916 Polysulphide reductase, NrfD JUNP479_0280 PF13247 4Fe-4S dicluster domain JUNP479_0280 PF00037 4Fe-4S binding domain JUNP479_0281 PF13435 Cytochrome c554 and c-prime JUNP479_0281 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) JUNP479_0282 PF02335 Cytochrome c552 JUNP479_0285 PF02754 Cysteine-rich domain JUNP479_0285 PF13183 4Fe-4S dicluster domain JUNP479_0286 PF00890 FAD binding domain JUNP479_0287 PF04324 BFD-like [2Fe-2S] binding domain JUNP479_0287 PF01266 FAD dependent oxidoreductase JUNP479_0289 PF02810 SEC-C motif JUNP479_0290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_0290 PF00672 HAMP domain JUNP479_0290 PF17200 Single Cache domain 2 JUNP479_0291 PF00480 ROK family JUNP479_0291 PF01047 MarR family JUNP479_0292 PF03942 DTW domain JUNP479_0293 PF01925 Sulfite exporter TauE/SafE JUNP479_0294 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_0294 PF03466 LysR substrate binding domain JUNP479_0296 PF14525 AraC-binding-like domain JUNP479_0296 PF12833 Helix-turn-helix domain JUNP479_0298 PF11398 Protein of unknown function (DUF2813) JUNP479_0300 PF00128 Alpha amylase, catalytic domain JUNP479_0300 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JUNP479_0308 PF02789 Cytosol aminopeptidase family, N-terminal domain JUNP479_0308 PF00883 Cytosol aminopeptidase family, catalytic domain JUNP479_0309 PF13419 Haloacid dehalogenase-like hydrolase JUNP479_0312 PF01207 Dihydrouridine synthase (Dus) JUNP479_0313 PF04304 Protein of unknown function (DUF454) JUNP479_0314 PF00156 Phosphoribosyl transferase domain JUNP479_0315 PF12169 DNA polymerase III subunits gamma and tau domain III JUNP479_0315 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JUNP479_0315 PF12170 DNA polymerase III tau subunit V interacting with alpha JUNP479_0316 PF02575 YbaB/EbfC DNA-binding family JUNP479_0321 PF01261 Xylose isomerase-like TIM barrel JUNP479_0322 PF03466 LysR substrate binding domain JUNP479_0322 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_0324 PF03279 Bacterial lipid A biosynthesis acyltransferase JUNP479_0325 PF03279 Bacterial lipid A biosynthesis acyltransferase JUNP479_0329 PF00136 DNA polymerase family B JUNP479_0329 PF03104 DNA polymerase family B, exonuclease domain JUNP479_0332 PF01863 Protein of unknown function DUF45 JUNP479_0335 PF03606 C4-dicarboxylate anaerobic carrier JUNP479_0338 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JUNP479_0338 PF01266 FAD dependent oxidoreductase JUNP479_0339 PF00109 Beta-ketoacyl synthase, N-terminal domain JUNP479_0339 PF02801 Beta-ketoacyl synthase, C-terminal domain JUNP479_0340 PF06826 Predicted Permease Membrane Region JUNP479_0340 PF02080 TrkA-C domain JUNP479_0342 PF12344 Ultra-violet resistance protein B JUNP479_0342 PF17757 UvrB interaction domain JUNP479_0342 PF00271 Helicase conserved C-terminal domain JUNP479_0342 PF04851 Type III restriction enzyme, res subunit JUNP479_0342 PF02151 UvrB/uvrC motif JUNP479_0344 PF09335 SNARE associated Golgi protein JUNP479_0345 PF02600 Disulfide bond formation protein DsbB JUNP479_0346 PF06450 Bacterial Na+/H+ antiporter B (NhaB) JUNP479_0347 PF00392 Bacterial regulatory proteins, gntR family JUNP479_0347 PF07840 FadR C-terminal domain JUNP479_0349 PF07152 YaeQ protein JUNP479_0351 PF02954 Bacterial regulatory protein, Fis family JUNP479_0351 PF00158 Sigma-54 interaction domain JUNP479_0351 PF13188 PAS domain JUNP479_0357 PF01554 MatE JUNP479_0358 PF06786 Uncharacterised protein family (UPF0253) JUNP479_0360 PF00677 Lumazine binding domain JUNP479_0363 PF13419 Haloacid dehalogenase-like hydrolase JUNP479_0364 PF01370 NAD dependent epimerase/dehydratase family JUNP479_0364 PF02222 ATP-grasp domain JUNP479_0365 PF00892 EamA-like transporter family JUNP479_0366 PF02525 Flavodoxin-like fold JUNP479_0371 PF17783 CvfB-like winged helix domain JUNP479_0371 PF13509 S1 domain JUNP479_0373 PF04269 Protein of unknown function, DUF440 JUNP479_0374 PF00912 Transglycosylase JUNP479_0375 PF04269 Protein of unknown function, DUF440 JUNP479_0376 PF03776 Septum formation topological specificity factor MinE JUNP479_0377 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JUNP479_0378 PF03775 Septum formation inhibitor MinC, C-terminal domain JUNP479_0378 PF05209 Septum formation inhibitor MinC, N-terminal domain JUNP479_0379 PF05209 Septum formation inhibitor MinC, N-terminal domain JUNP479_0379 PF03775 Septum formation inhibitor MinC, C-terminal domain JUNP479_0380 PF05166 YcgL domain JUNP479_0381 PF08274 PhnA Zinc-Ribbon JUNP479_0381 PF03831 PhnA domain JUNP479_0383 PF00704 Glycosyl hydrolases family 18 JUNP479_0383 PF08329 Chitinase A, N-terminal domain JUNP479_0384 PF04828 Glutathione-dependent formaldehyde-activating enzyme JUNP479_0385 PF00300 Histidine phosphatase superfamily (branch 1) JUNP479_0388 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_0388 PF08448 PAS fold JUNP479_0389 PF01713 Smr domain JUNP479_0390 PF05175 Methyltransferase small domain JUNP479_0391 PF01264 Chorismate synthase JUNP479_0393 PF00271 Helicase conserved C-terminal domain JUNP479_0393 PF00270 DEAD/DEAH box helicase JUNP479_0394 PF01124 MAPEG family JUNP479_0397 PF03222 Tryptophan/tyrosine permease family JUNP479_0398 PF00356 Bacterial regulatory proteins, lacI family JUNP479_0398 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JUNP479_0399 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JUNP479_0399 PF00381 PTS HPr component phosphorylation site JUNP479_0400 PF00294 pfkB family carbohydrate kinase JUNP479_0401 PF02378 Phosphotransferase system, EIIC JUNP479_0401 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JUNP479_0402 PF06560 Glucose-6-phosphate isomerase (GPI) JUNP479_0403 PF00356 Bacterial regulatory proteins, lacI family JUNP479_0403 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JUNP479_0406 PF03830 PTS system sorbose subfamily IIB component JUNP479_0406 PF03610 PTS system fructose IIA component JUNP479_0407 PF03609 PTS system sorbose-specific iic component JUNP479_0408 PF03613 PTS system mannose/fructose/sorbose family IID component JUNP479_0410 PF06945 Protein of unknown function (DUF1289) JUNP479_0411 PF03562 MltA specific insert domain JUNP479_0411 PF06725 3D domain JUNP479_0412 PF00111 2Fe-2S iron-sulfur cluster binding domain JUNP479_0413 PF00268 Ribonucleotide reductase, small chain JUNP479_0414 PF03477 ATP cone domain JUNP479_0414 PF02867 Ribonucleotide reductase, barrel domain JUNP479_0414 PF00317 Ribonucleotide reductase, all-alpha domain JUNP479_0415 PF13419 Haloacid dehalogenase-like hydrolase JUNP479_0417 PF00521 DNA gyrase/topoisomerase IV, subunit A JUNP479_0417 PF03989 DNA gyrase C-terminal domain, beta-propeller JUNP479_0418 PF00128 Alpha amylase, catalytic domain JUNP479_0420 PF04055 Radical SAM superfamily JUNP479_0422 PF03129 Anticodon binding domain JUNP479_0422 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JUNP479_0422 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JUNP479_0422 PF02824 TGS domain JUNP479_0423 PF05198 Translation initiation factor IF-3, N-terminal domain JUNP479_0423 PF00707 Translation initiation factor IF-3, C-terminal domain JUNP479_0424 PF01632 Ribosomal protein L35 JUNP479_0425 PF00453 Ribosomal protein L20 JUNP479_0427 PF01323 DSBA-like thioredoxin domain JUNP479_0428 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JUNP479_0428 PF01409 tRNA synthetases class II core domain (F) JUNP479_0429 PF03483 B3/4 domain JUNP479_0429 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JUNP479_0429 PF01588 Putative tRNA binding domain JUNP479_0429 PF03147 Ferredoxin-fold anticodon binding domain JUNP479_0429 PF03484 tRNA synthetase B5 domain JUNP479_0430 PF00216 Bacterial DNA-binding protein JUNP479_0431 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_0431 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_0431 PF00072 Response regulator receiver domain JUNP479_0431 PF09456 RcsC Alpha-Beta-Loop (ABL) JUNP479_0434 PF02146 Sir2 family JUNP479_0435 PF00356 Bacterial regulatory proteins, lacI family JUNP479_0436 PF00294 pfkB family carbohydrate kinase JUNP479_0437 PF13407 Periplasmic binding protein domain JUNP479_0438 PF02653 Branched-chain amino acid transport system / permease component JUNP479_0439 PF00005 ABC transporter JUNP479_0440 PF05025 RbsD / FucU transport protein family JUNP479_0441 PF02798 Glutathione S-transferase, N-terminal domain JUNP479_0441 PF00043 Glutathione S-transferase, C-terminal domain JUNP479_0443 PF13416 Bacterial extracellular solute-binding protein JUNP479_0444 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_0445 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_0446 PF00005 ABC transporter JUNP479_0446 PF08402 TOBE domain JUNP479_0449 PF01171 PP-loop family JUNP479_0450 PF00582 Universal stress protein family JUNP479_0451 PF13545 Crp-like helix-turn-helix domain JUNP479_0451 PF00027 Cyclic nucleotide-binding domain JUNP479_0454 PF00403 Heavy-metal-associated domain JUNP479_0456 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JUNP479_0456 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP JUNP479_0459 PF00115 Cytochrome C and Quinol oxidase polypeptide I JUNP479_0461 PF13185 GAF domain JUNP479_0462 PF17516 ProQ C-terminal domain JUNP479_0462 PF04352 ProQ/FINO family JUNP479_0463 PF00595 PDZ domain JUNP479_0463 PF03572 Peptidase family S41 JUNP479_0463 PF17804 Tail specific protease N-terminal domain JUNP479_0463 PF11818 C-terminal domain of tail specific protease (DUF3340) JUNP479_0464 PF01433 Peptidase family M1 domain JUNP479_0464 PF11940 Domain of unknown function (DUF3458) Ig-like fold JUNP479_0464 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JUNP479_0466 PF05088 Bacterial NAD-glutamate dehydrogenase JUNP479_0467 PF01180 Dihydroorotate dehydrogenase JUNP479_0468 PF07126 Cell-division protein ZapC JUNP479_0469 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_0469 PF00672 HAMP domain JUNP479_0470 PF00360 Phytochrome region JUNP479_0470 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_0470 PF00563 EAL domain JUNP479_0470 PF01590 GAF domain JUNP479_0471 PF00072 Response regulator receiver domain JUNP479_0471 PF01339 CheB methylesterase JUNP479_0472 PF01739 CheR methyltransferase, SAM binding domain JUNP479_0472 PF03705 CheR methyltransferase, all-alpha domain JUNP479_0473 PF01584 CheW-like domain JUNP479_0474 PF17202 Single cache domain 3 JUNP479_0474 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_0474 PF00672 HAMP domain JUNP479_0475 PF01627 Hpt domain JUNP479_0475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_0475 PF02895 Signal transducing histidine kinase, homodimeric domain JUNP479_0475 PF09078 CheY binding JUNP479_0475 PF01584 CheW-like domain JUNP479_0477 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_0477 PF01627 Hpt domain JUNP479_0477 PF01584 CheW-like domain JUNP479_0477 PF00072 Response regulator receiver domain JUNP479_0479 PF02926 THUMP domain JUNP479_0479 PF01170 Putative RNA methylase family UPF0020 JUNP479_0479 PF10672 S-adenosylmethionine-dependent methyltransferase JUNP479_0481 PF00005 ABC transporter JUNP479_0481 PF12848 ABC transporter JUNP479_0481 PF16326 ABC transporter C-terminal domain JUNP479_0482 PF04957 Ribosome modulation factor JUNP479_0483 PF07977 FabA-like domain JUNP479_0484 PF13654 AAA domain JUNP479_0484 PF05362 Lon protease (S16) C-terminal proteolytic domain JUNP479_0488 PF07130 YebG protein JUNP479_0490 PF00106 short chain dehydrogenase JUNP479_0493 PF08361 MAATS-type transcriptional repressor, C-terminal region JUNP479_0493 PF00440 Bacterial regulatory proteins, tetR family JUNP479_0495 PF06974 Protein of unknown function (DUF1298) JUNP479_0495 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain JUNP479_0499 PF03972 MmgE/PrpD family JUNP479_0500 PF00285 Citrate synthase, C-terminal domain JUNP479_0503 PF04403 Paraquat-inducible protein A JUNP479_0504 PF02470 MlaD protein JUNP479_0505 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JUNP479_0505 PF01189 16S rRNA methyltransferase RsmB/F JUNP479_0505 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF JUNP479_0507 PF00589 Phage integrase family JUNP479_0508 PF01026 TatD related DNase JUNP479_0509 PF09115 DNA polymerase III, delta subunit, C terminal JUNP479_0510 PF02223 Thymidylate kinase JUNP479_0511 PF02618 YceG-like family JUNP479_0512 PF01063 Amino-transferase class IV JUNP479_0513 PF02801 Beta-ketoacyl synthase, C-terminal domain JUNP479_0513 PF00109 Beta-ketoacyl synthase, N-terminal domain JUNP479_0514 PF00550 Phosphopantetheine attachment site JUNP479_0516 PF00698 Acyl transferase domain JUNP479_0517 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JUNP479_0517 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JUNP479_0518 PF02504 Fatty acid synthesis protein JUNP479_0519 PF01783 Ribosomal L32p protein family JUNP479_0520 PF02620 Large ribosomal RNA subunit accumulation protein YceD JUNP479_0521 PF02545 Maf-like protein JUNP479_0522 PF13419 Haloacid dehalogenase-like hydrolase JUNP479_0523 PF00849 RNA pseudouridylate synthase JUNP479_0523 PF01479 S4 domain JUNP479_0524 PF00575 S1 RNA binding domain JUNP479_0524 PF10150 Ribonuclease E/G family JUNP479_0524 PF12111 Polyribonucleotide phosphorylase C terminal JUNP479_0525 PF01384 Phosphate transporter family JUNP479_0526 PF00692 dUTPase JUNP479_0527 PF00485 Phosphoribulokinase / Uridine kinase family JUNP479_0528 PF10609 NUBPL iron-transfer P-loop NTPase JUNP479_0529 PF01588 Putative tRNA binding domain JUNP479_0529 PF09334 tRNA synthetases class I (M) JUNP479_0529 PF08264 Anticodon-binding domain of tRNA JUNP479_0531 PF00708 Acylphosphatase JUNP479_0532 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_0532 PF00672 HAMP domain JUNP479_0532 PF12729 Four helix bundle sensory module for signal transduction JUNP479_0533 PF17785 PUA-like domain JUNP479_0533 PF10672 S-adenosylmethionine-dependent methyltransferase JUNP479_0535 PF02769 AIR synthase related protein, C-terminal domain JUNP479_0535 PF00586 AIR synthase related protein, N-terminal domain JUNP479_0537 PF00753 Metallo-beta-lactamase superfamily JUNP479_0538 PF00570 HRDC domain JUNP479_0538 PF01612 3'-5' exonuclease JUNP479_0539 PF00501 AMP-binding enzyme JUNP479_0539 PF13193 AMP-binding enzyme C-terminal domain JUNP479_0540 PF12697 Alpha/beta hydrolase family JUNP479_0540 PF08241 Methyltransferase domain JUNP479_0542 PF00814 Glycoprotease family JUNP479_0543 PF13307 Helicase C-terminal domain JUNP479_0543 PF04851 Type III restriction enzyme, res subunit JUNP479_0545 PF01634 ATP phosphoribosyltransferase JUNP479_0545 PF08029 HisG, C-terminal domain JUNP479_0546 PF00815 Histidinol dehydrogenase JUNP479_0547 PF00155 Aminotransferase class I and II JUNP479_0548 PF08645 Polynucleotide kinase 3 phosphatase JUNP479_0548 PF00475 Imidazoleglycerol-phosphate dehydratase JUNP479_0549 PF00117 Glutamine amidotransferase class-I JUNP479_0550 PF00977 Histidine biosynthesis protein JUNP479_0551 PF00977 Histidine biosynthesis protein JUNP479_0552 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JUNP479_0552 PF01502 Phosphoribosyl-AMP cyclohydrolase JUNP479_0553 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_0553 PF08448 PAS fold JUNP479_0554 PF00501 AMP-binding enzyme JUNP479_0554 PF13193 AMP-binding enzyme C-terminal domain JUNP479_0555 PF03606 C4-dicarboxylate anaerobic carrier JUNP479_0557 PF05433 Glycine zipper 2TM domain JUNP479_0558 PF00111 2Fe-2S iron-sulfur cluster binding domain JUNP479_0558 PF01799 [2Fe-2S] binding domain JUNP479_0559 PF03450 CO dehydrogenase flavoprotein C-terminal domain JUNP479_0559 PF00941 FAD binding domain in molybdopterin dehydrogenase JUNP479_0560 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JUNP479_0560 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JUNP479_0561 PF00860 Permease family JUNP479_0562 PF01979 Amidohydrolase family JUNP479_0563 PF00860 Permease family JUNP479_0564 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JUNP479_0564 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JUNP479_0564 PF01799 [2Fe-2S] binding domain JUNP479_0565 PF00941 FAD binding domain in molybdopterin dehydrogenase JUNP479_0566 PF01979 Amidohydrolase family JUNP479_0567 PF07992 Pyridine nucleotide-disulphide oxidoreductase JUNP479_0567 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JUNP479_0569 PF12804 MobA-like NTP transferase domain JUNP479_0571 PF13478 XdhC Rossmann domain JUNP479_0571 PF02625 XdhC and CoxI family JUNP479_0572 PF00892 EamA-like transporter family JUNP479_0573 PF00696 Amino acid kinase family JUNP479_0574 PF01979 Amidohydrolase family JUNP479_0575 PF07687 Peptidase dimerisation domain JUNP479_0575 PF01546 Peptidase family M20/M25/M40 JUNP479_0576 PF00291 Pyridoxal-phosphate dependent enzyme JUNP479_0577 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JUNP479_0577 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JUNP479_0581 PF01327 Polypeptide deformylase JUNP479_0583 PF01965 DJ-1/PfpI family JUNP479_0586 PF03330 Lytic transglycolase JUNP479_0587 PF16330 MukB hinge domain JUNP479_0587 PF04310 MukB N-terminal JUNP479_0588 PF04288 MukE-like family JUNP479_0589 PF03882 MukF winged-helix domain JUNP479_0589 PF17193 MukF C-terminal domain JUNP479_0589 PF17192 MukF middle domain JUNP479_0590 PF13847 Methyltransferase domain JUNP479_0591 PF02698 DUF218 domain JUNP479_0592 PF00121 Triosephosphate isomerase JUNP479_0593 PF00365 Phosphofructokinase JUNP479_0594 PF00375 Sodium:dicarboxylate symporter family JUNP479_0595 PF06865 Pyrimidine/purine nucleoside phosphorylase JUNP479_0596 PF03315 Serine dehydratase beta chain JUNP479_0596 PF03313 Serine dehydratase alpha chain JUNP479_0597 PF03313 Serine dehydratase alpha chain JUNP479_0597 PF03315 Serine dehydratase beta chain JUNP479_0599 PF00425 chorismate binding enzyme JUNP479_0599 PF04715 Anthranilate synthase component I, N terminal region JUNP479_0600 PF00293 NUDIX domain JUNP479_0601 PF03222 Tryptophan/tyrosine permease family JUNP479_0602 PF00375 Sodium:dicarboxylate symporter family JUNP479_0603 PF00270 DEAD/DEAH box helicase JUNP479_0603 PF00570 HRDC domain JUNP479_0603 PF16124 RecQ zinc-binding JUNP479_0603 PF00271 Helicase conserved C-terminal domain JUNP479_0603 PF09382 RQC domain JUNP479_0604 PF08298 PrkA AAA domain JUNP479_0604 PF06798 PrkA serine protein kinase C-terminal domain JUNP479_0605 PF04285 Protein of unknown function (DUF444) JUNP479_0606 PF04293 SpoVR like protein JUNP479_0607 PF00378 Enoyl-CoA hydratase/isomerase JUNP479_0607 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JUNP479_0607 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JUNP479_0608 PF00108 Thiolase, N-terminal domain JUNP479_0608 PF02803 Thiolase, C-terminal domain JUNP479_0609 PF17863 AAA lid domain JUNP479_0609 PF07726 ATPase family associated with various cellular activities (AAA) JUNP479_0610 PF01882 Protein of unknown function DUF58 JUNP479_0613 PF13519 von Willebrand factor type A domain JUNP479_0615 PF08281 Sigma-70, region 4 JUNP479_0615 PF04542 Sigma-70 region 2 JUNP479_0617 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JUNP479_0618 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JUNP479_0619 PF08668 HDOD domain JUNP479_0619 PF00563 EAL domain JUNP479_0620 PF02803 Thiolase, C-terminal domain JUNP479_0620 PF00108 Thiolase, N-terminal domain JUNP479_0621 PF00376 MerR family regulatory protein JUNP479_0621 PF09278 MerR, DNA binding JUNP479_0622 PF01386 Ribosomal L25p family JUNP479_0624 PF00270 DEAD/DEAH box helicase JUNP479_0624 PF11898 Domain of unknown function (DUF3418) JUNP479_0624 PF04408 Helicase associated domain (HA2) JUNP479_0624 PF00271 Helicase conserved C-terminal domain JUNP479_0624 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JUNP479_0625 PF00571 CBS domain JUNP479_0625 PF01368 DHH family JUNP479_0625 PF02272 DHHA1 domain JUNP479_0625 PF01743 Poly A polymerase head domain JUNP479_0626 PF01966 HD domain JUNP479_0628 PF00534 Glycosyl transferases group 1 JUNP479_0628 PF00862 Sucrose synthase JUNP479_0629 PF00534 Glycosyl transferases group 1 JUNP479_0629 PF13439 Glycosyltransferase Family 4 JUNP479_0632 PF12464 Maltose acetyltransferase JUNP479_0632 PF00132 Bacterial transferase hexapeptide (six repeats) JUNP479_0643 PF13439 Glycosyltransferase Family 4 JUNP479_0643 PF00534 Glycosyl transferases group 1 JUNP479_0644 PF07238 PilZ domain JUNP479_0644 PF03552 Cellulose synthase JUNP479_0644 PF00535 Glycosyl transferase family 2 JUNP479_0645 PF02397 Bacterial sugar transferase JUNP479_0646 PF00534 Glycosyl transferases group 1 JUNP479_0647 PF00072 Response regulator receiver domain JUNP479_0647 PF00211 Adenylate and Guanylate cyclase catalytic domain JUNP479_0653 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_0653 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_0653 PF09308 LuxQ, periplasmic JUNP479_0653 PF00072 Response regulator receiver domain JUNP479_0654 PF08411 Exonuclease C-terminal JUNP479_0654 PF00929 Exonuclease JUNP479_0657 PF03788 LrgA family JUNP479_0658 PF04172 LrgB-like family JUNP479_0659 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region JUNP479_0659 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JUNP479_0660 PF01212 Beta-eliminating lyase JUNP479_0661 PF04244 Deoxyribodipyrimidine photo-lyase-related protein JUNP479_0662 PF01266 FAD dependent oxidoreductase JUNP479_0663 PF01266 FAD dependent oxidoreductase JUNP479_0664 PF01118 Semialdehyde dehydrogenase, NAD binding domain JUNP479_0664 PF02774 Semialdehyde dehydrogenase, dimerisation domain JUNP479_0665 PF02634 FdhD/NarQ family JUNP479_0666 PF00158 Sigma-54 interaction domain JUNP479_0666 PF01590 GAF domain JUNP479_0666 PF02954 Bacterial regulatory protein, Fis family JUNP479_0669 PF12800 4Fe-4S binding domain JUNP479_0669 PF13247 4Fe-4S dicluster domain JUNP479_0670 PF13426 PAS domain JUNP479_0670 PF00989 PAS fold JUNP479_0670 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_0670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_0670 PF13493 Domain of unknown function (DUF4118) JUNP479_0670 PF08447 PAS fold JUNP479_0672 PF02705 K+ potassium transporter JUNP479_0673 PF12798 4Fe-4S binding domain JUNP479_0673 PF00037 4Fe-4S binding domain JUNP479_0674 PF00361 Proton-conducting membrane transporter JUNP479_0675 PF00146 NADH dehydrogenase JUNP479_0676 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JUNP479_0676 PF00374 Nickel-dependent hydrogenase JUNP479_0676 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JUNP479_0677 PF12838 4Fe-4S dicluster domain JUNP479_0678 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JUNP479_0679 PF07450 Formate hydrogenlyase maturation protein HycH JUNP479_0680 PF01750 Hydrogenase maturation protease JUNP479_0682 PF12390 Selenocysteine synthase N terminal JUNP479_0682 PF03841 L-seryl-tRNA selenium transferase JUNP479_0683 PF00009 Elongation factor Tu GTP binding domain JUNP479_0683 PF03144 Elongation factor Tu domain 2 JUNP479_0683 PF09105 Elongation factor SelB, winged helix JUNP479_0683 PF09106 Elongation factor SelB, winged helix JUNP479_0683 PF09107 Elongation factor SelB, winged helix JUNP479_0684 PF01300 Telomere recombination JUNP479_0684 PF00708 Acylphosphatase JUNP479_0684 PF17788 HypF Kae1-like domain JUNP479_0684 PF07503 HypF finger JUNP479_0685 PF01455 HupF/HypC family JUNP479_0686 PF01924 Hydrogenase formation hypA family JUNP479_0687 PF00586 AIR synthase related protein, N-terminal domain JUNP479_0687 PF02769 AIR synthase related protein, C-terminal domain JUNP479_0688 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA JUNP479_0690 PF02492 CobW/HypB/UreG, nucleotide-binding domain JUNP479_0692 PF00005 ABC transporter JUNP479_0693 PF00005 ABC transporter JUNP479_0694 PF12911 N-terminal TM domain of oligopeptide transport permease C JUNP479_0694 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_0695 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_0696 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JUNP479_0697 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE JUNP479_0698 PF01750 Hydrogenase maturation protease JUNP479_0699 PF00374 Nickel-dependent hydrogenase JUNP479_0700 PF03916 Polysulphide reductase, NrfD JUNP479_0701 PF13247 4Fe-4S dicluster domain JUNP479_0702 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JUNP479_0702 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal JUNP479_0705 PF01925 Sulfite exporter TauE/SafE JUNP479_0706 PF13520 Amino acid permease JUNP479_0708 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JUNP479_0708 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JUNP479_0709 PF00378 Enoyl-CoA hydratase/isomerase JUNP479_0710 PF00378 Enoyl-CoA hydratase/isomerase JUNP479_0711 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JUNP479_0711 PF02770 Acyl-CoA dehydrogenase, middle domain JUNP479_0711 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JUNP479_0712 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JUNP479_0712 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JUNP479_0712 PF02770 Acyl-CoA dehydrogenase, middle domain JUNP479_0713 PF01039 Carboxyl transferase domain JUNP479_0714 PF00378 Enoyl-CoA hydratase/isomerase JUNP479_0715 PF00364 Biotin-requiring enzyme JUNP479_0715 PF00289 Biotin carboxylase, N-terminal domain JUNP479_0715 PF02785 Biotin carboxylase C-terminal domain JUNP479_0715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JUNP479_0716 PF00682 HMGL-like JUNP479_0717 PF00376 MerR family regulatory protein JUNP479_0717 PF09278 MerR, DNA binding JUNP479_0720 PF01184 GPR1/FUN34/yaaH family JUNP479_0721 PF06167 Glucose-regulated metallo-peptidase M90 JUNP479_0722 PF00583 Acetyltransferase (GNAT) family JUNP479_0723 PF01235 Sodium:alanine symporter family JUNP479_0724 PF00378 Enoyl-CoA hydratase/isomerase JUNP479_0727 PF04341 Protein of unknown function, DUF485 JUNP479_0728 PF00474 Sodium:solute symporter family JUNP479_0729 PF00005 ABC transporter JUNP479_0729 PF12848 ABC transporter JUNP479_0730 PF13145 PPIC-type PPIASE domain JUNP479_0731 PF00216 Bacterial DNA-binding protein JUNP479_0732 PF05362 Lon protease (S16) C-terminal proteolytic domain JUNP479_0732 PF02190 ATP-dependent protease La (LON) substrate-binding domain JUNP479_0732 PF00004 ATPase family associated with various cellular activities (AAA) JUNP479_0733 PF06689 ClpX C4-type zinc finger JUNP479_0733 PF07724 AAA domain (Cdc48 subfamily) JUNP479_0733 PF10431 C-terminal, D2-small domain, of ClpB protein JUNP479_0734 PF00574 Clp protease JUNP479_0735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JUNP479_0735 PF05697 Bacterial trigger factor protein (TF) JUNP479_0735 PF05698 Bacterial trigger factor protein (TF) C-terminus JUNP479_0738 PF02687 FtsX-like permease family JUNP479_0738 PF12704 MacB-like periplasmic core domain JUNP479_0739 PF00005 ABC transporter JUNP479_0740 PF12704 MacB-like periplasmic core domain JUNP479_0740 PF02687 FtsX-like permease family JUNP479_0742 PF00270 DEAD/DEAH box helicase JUNP479_0742 PF02559 CarD-like/TRCF domain JUNP479_0742 PF00271 Helicase conserved C-terminal domain JUNP479_0742 PF17757 UvrB interaction domain JUNP479_0742 PF03461 TRCF domain JUNP479_0743 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JUNP479_0744 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JUNP479_0745 PF00892 EamA-like transporter family JUNP479_0747 PF00300 Histidine phosphatase superfamily (branch 1) JUNP479_0748 PF00675 Insulinase (Peptidase family M16) JUNP479_0748 PF05193 Peptidase M16 inactive domain JUNP479_0749 PF05724 Thiopurine S-methyltransferase (TPMT) JUNP479_0756 PF00117 Glutamine amidotransferase class-I JUNP479_0756 PF00958 GMP synthase C terminal domain JUNP479_0756 PF02540 NAD synthase JUNP479_0757 PF00478 IMP dehydrogenase / GMP reductase domain JUNP479_0757 PF00571 CBS domain JUNP479_0758 PF02705 K+ potassium transporter JUNP479_0760 PF01618 MotA/TolQ/ExbB proton channel family JUNP479_0761 PF02472 Biopolymer transport protein ExbD/TolR JUNP479_0762 PF13742 OB-fold nucleic acid binding domain JUNP479_0762 PF02601 Exonuclease VII, large subunit JUNP479_0763 PF07702 UTRA domain JUNP479_0763 PF00392 Bacterial regulatory proteins, gntR family JUNP479_0764 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JUNP479_0764 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JUNP479_0764 PF02378 Phosphotransferase system, EIIC JUNP479_0765 PF01074 Glycosyl hydrolases family 38 N-terminal domain JUNP479_0765 PF09261 Alpha mannosidase middle domain JUNP479_0765 PF07748 Glycosyl hydrolases family 38 C-terminal domain JUNP479_0766 PF07478 D-ala D-ala ligase C-terminus JUNP479_0766 PF01820 D-ala D-ala ligase N-terminus JUNP479_0768 PF00255 Glutathione peroxidase JUNP479_0769 PF00270 DEAD/DEAH box helicase JUNP479_0769 PF00271 Helicase conserved C-terminal domain JUNP479_0770 PF04055 Radical SAM superfamily JUNP479_0771 PF00672 HAMP domain JUNP479_0771 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_0772 PF00793 DAHP synthetase I family JUNP479_0773 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JUNP479_0774 PF00266 Aminotransferase class-V JUNP479_0775 PF00766 Electron transfer flavoprotein FAD-binding domain JUNP479_0775 PF01012 Electron transfer flavoprotein domain JUNP479_0776 PF01012 Electron transfer flavoprotein domain JUNP479_0778 PF01544 CorA-like Mg2+ transporter protein JUNP479_0779 PF11143 Protein of unknown function (DUF2919) JUNP479_0781 PF07273 Protein of unknown function (DUF1439) JUNP479_0783 PF00483 Nucleotidyl transferase JUNP479_0784 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_0784 PF03707 Bacterial signalling protein N terminal repeat JUNP479_0784 PF00563 EAL domain JUNP479_0787 PF00294 pfkB family carbohydrate kinase JUNP479_0789 PF00762 Ferrochelatase JUNP479_0791 PF05191 Adenylate kinase, active site lid JUNP479_0792 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) JUNP479_0793 PF00156 Phosphoribosyl transferase domain JUNP479_0794 PF02674 Colicin V production protein JUNP479_0795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JUNP479_0795 PF02403 Seryl-tRNA synthetase N-terminal domain JUNP479_0796 PF00004 ATPase family associated with various cellular activities (AAA) JUNP479_0796 PF12002 MgsA AAA+ ATPase C terminal JUNP479_0796 PF16193 AAA C-terminal domain JUNP479_0797 PF03548 Outer membrane lipoprotein carrier protein LolA JUNP479_0798 PF01580 FtsK/SpoIIIE family JUNP479_0798 PF09397 Ftsk gamma domain JUNP479_0798 PF17854 FtsK alpha domain JUNP479_0798 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JUNP479_0799 PF01037 Lrp/AsnC ligand binding domain JUNP479_0800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JUNP479_0800 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JUNP479_0801 PF07992 Pyridine nucleotide-disulphide oxidoreductase JUNP479_0802 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_0803 PF05433 Glycine zipper 2TM domain JUNP479_0804 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JUNP479_0805 PF04376 Arginine-tRNA-protein transferase, N terminus JUNP479_0805 PF04377 Arginine-tRNA-protein transferase, C terminus JUNP479_0806 PF01176 Translation initiation factor 1A / IF-1 JUNP479_0807 PF00004 ATPase family associated with various cellular activities (AAA) JUNP479_0807 PF07724 AAA domain (Cdc48 subfamily) JUNP479_0807 PF02861 Clp amino terminal domain, pathogenicity island component JUNP479_0807 PF17871 AAA lid domain JUNP479_0807 PF10431 C-terminal, D2-small domain, of ClpB protein JUNP479_0808 PF02617 ATP-dependent Clp protease adaptor protein ClpS JUNP479_0809 PF00313 'Cold-shock' DNA-binding domain JUNP479_0810 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JUNP479_0810 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JUNP479_0814 PF00072 Response regulator receiver domain JUNP479_0814 PF00486 Transcriptional regulatory protein, C terminal JUNP479_0815 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_0815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_0815 PF00672 HAMP domain JUNP479_0817 PF09924 Uncharacterised conserved protein (DUF2156) JUNP479_0817 PF03706 Lysylphosphatidylglycerol synthase TM region JUNP479_0819 PF01219 Prokaryotic diacylglycerol kinase JUNP479_0820 PF08019 Phosphoethanolamine transferase EptA/EptB JUNP479_0820 PF00884 Sulfatase JUNP479_0823 PF01740 STAS domain JUNP479_0823 PF00916 Sulfate permease family JUNP479_0829 PF03239 Iron permease FTR1 family JUNP479_0830 PF01593 Flavin containing amine oxidoreductase JUNP479_0833 PF07690 Major Facilitator Superfamily JUNP479_0837 PF00561 alpha/beta hydrolase fold JUNP479_0841 PF01625 Peptide methionine sulfoxide reductase JUNP479_0842 PF00696 Amino acid kinase family JUNP479_0842 PF00583 Acetyltransferase (GNAT) family JUNP479_0843 PF00696 Amino acid kinase family JUNP479_0843 PF01842 ACT domain JUNP479_0845 PF00884 Sulfatase JUNP479_0846 PF17676 LD-carboxypeptidase C-terminal domain JUNP479_0846 PF02016 LD-carboxypeptidase N-terminal domain JUNP479_0847 PF01734 Patatin-like phospholipase JUNP479_0848 PF17179 4Fe-4S dicluster domain JUNP479_0849 PF00175 Oxidoreductase NAD-binding domain JUNP479_0849 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JUNP479_0850 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JUNP479_0850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JUNP479_0850 PF13187 4Fe-4S dicluster domain JUNP479_0851 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JUNP479_0851 PF14824 Sirohaem biosynthesis protein central JUNP479_0851 PF10414 Sirohaem synthase dimerisation region JUNP479_0853 PF01906 Putative heavy-metal-binding JUNP479_0854 PF05036 Sporulation related domain JUNP479_0855 PF08245 Mur ligase middle domain JUNP479_0855 PF02875 Mur ligase family, glutamate ligase domain JUNP479_0856 PF01039 Carboxyl transferase domain JUNP479_0856 PF17848 Acetyl-coA carboxylase zinc finger domain JUNP479_0857 PF01416 tRNA pseudouridine synthase JUNP479_0859 PF01118 Semialdehyde dehydrogenase, NAD binding domain JUNP479_0859 PF02774 Semialdehyde dehydrogenase, dimerisation domain JUNP479_0860 PF11890 Domain of unknown function (DUF3410) JUNP479_0860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JUNP479_0860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JUNP479_0861 PF01569 PAP2 superfamily JUNP479_0862 PF00929 Exonuclease JUNP479_0863 PF13726 Na+-H+ antiporter family JUNP479_0863 PF03553 Na+/H+ antiporter family JUNP479_0864 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_0864 PF00563 EAL domain JUNP479_0864 PF13188 PAS domain JUNP479_0864 PF03707 Bacterial signalling protein N terminal repeat JUNP479_0866 PF00270 DEAD/DEAH box helicase JUNP479_0866 PF03880 DbpA RNA binding domain JUNP479_0866 PF00271 Helicase conserved C-terminal domain JUNP479_0867 PF03061 Thioesterase superfamily JUNP479_0869 PF13183 4Fe-4S dicluster domain JUNP479_0869 PF01565 FAD binding domain JUNP479_0869 PF02913 FAD linked oxidases, C-terminal domain JUNP479_0871 PF03741 Integral membrane protein TerC family JUNP479_0871 PF03471 Transporter associated domain JUNP479_0872 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JUNP479_0873 PF00107 Zinc-binding dehydrogenase JUNP479_0873 PF08240 Alcohol dehydrogenase GroES-like domain JUNP479_0874 PF00962 Adenosine/AMP deaminase JUNP479_0875 PF13344 Haloacid dehalogenase-like hydrolase JUNP479_0876 PF02254 TrkA-N domain JUNP479_0876 PF00999 Sodium/hydrogen exchanger family JUNP479_0878 PF00733 Asparagine synthase JUNP479_0878 PF13537 Glutamine amidotransferase domain JUNP479_0880 PF14497 Glutathione S-transferase, C-terminal domain JUNP479_0880 PF02798 Glutathione S-transferase, N-terminal domain JUNP479_0882 PF04209 homogentisate 1,2-dioxygenase JUNP479_0883 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JUNP479_0885 PF00849 RNA pseudouridylate synthase JUNP479_0886 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_0887 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_0888 PF00497 Bacterial extracellular solute-binding proteins, family 3 JUNP479_0889 PF00005 ABC transporter JUNP479_0890 PF03956 Lysine exporter LysO JUNP479_0891 PF01979 Amidohydrolase family JUNP479_0892 PF04336 Acyl carrier protein phosphodiesterase JUNP479_0894 PF03960 ArsC family JUNP479_0895 PF00578 AhpC/TSA family JUNP479_0896 PF01435 Peptidase family M48 JUNP479_0896 PF07720 Tetratricopeptide repeat JUNP479_0897 PF01206 Sulfurtransferase TusA JUNP479_0898 PF01594 AI-2E family transporter JUNP479_0900 PF00561 alpha/beta hydrolase fold JUNP479_0901 PF03976 Polyphosphate kinase 2 (PPK2) JUNP479_0902 PF00005 ABC transporter JUNP479_0902 PF08402 TOBE domain JUNP479_0903 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_0904 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_0904 PF14785 Maltose transport system permease protein MalF P2 domain JUNP479_0905 PF01547 Bacterial extracellular solute-binding protein JUNP479_0906 PF04245 37-kD nucleoid-associated bacterial protein JUNP479_0907 PF07208 Protein of unknown function (DUF1414) JUNP479_0908 PF11893 Domain of unknown function (DUF3413) JUNP479_0908 PF00884 Sulfatase JUNP479_0909 PF03180 NLPA lipoprotein JUNP479_0910 PF00082 Subtilase family JUNP479_0910 PF01483 Proprotein convertase P-domain JUNP479_0912 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JUNP479_0912 PF02896 PEP-utilising enzyme, TIM barrel domain JUNP479_0912 PF00391 PEP-utilising enzyme, mobile domain JUNP479_0913 PF03618 Kinase/pyrophosphorylase JUNP479_0915 PF00324 Amino acid permease JUNP479_0918 PF13419 Haloacid dehalogenase-like hydrolase JUNP479_0919 PF08447 PAS fold JUNP479_0919 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_0920 PF02347 Glycine cleavage system P-protein JUNP479_0921 PF01597 Glycine cleavage H-protein JUNP479_0922 PF01571 Aminomethyltransferase folate-binding domain JUNP479_0922 PF08669 Glycine cleavage T-protein C-terminal barrel domain JUNP479_0923 PF01494 FAD binding domain JUNP479_0924 PF01494 FAD binding domain JUNP479_0925 PF03695 Uncharacterised protein family (UPF0149) JUNP479_0927 PF05164 Cell division protein ZapA JUNP479_0928 PF00384 Molybdopterin oxidoreductase JUNP479_0929 PF02634 FdhD/NarQ family JUNP479_0930 PF03466 LysR substrate binding domain JUNP479_0930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_0931 PF07690 Major Facilitator Superfamily JUNP479_0932 PF00043 Glutathione S-transferase, C-terminal domain JUNP479_0932 PF02798 Glutathione S-transferase, N-terminal domain JUNP479_0934 PF00459 Inositol monophosphatase family JUNP479_0935 PF00672 HAMP domain JUNP479_0935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_0936 PF02535 ZIP Zinc transporter JUNP479_0937 PF01048 Phosphorylase superfamily JUNP479_0939 PF01497 Periplasmic binding protein JUNP479_0940 PF02719 Polysaccharide biosynthesis protein JUNP479_0941 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JUNP479_0943 PF02348 Cytidylyltransferase JUNP479_0944 PF00202 Aminotransferase class-III JUNP479_0947 PF08666 SAF domain JUNP479_0947 PF03102 NeuB family JUNP479_0949 PF01209 ubiE/COQ5 methyltransferase family JUNP479_0952 PF02561 Flagellar protein FliS JUNP479_0953 PF07196 Flagellin hook IN motif JUNP479_0953 PF07195 Flagellar hook-associated protein 2 C-terminus JUNP479_0953 PF02465 Flagellar hook-associated protein 2 N-terminus JUNP479_0955 PF00700 Bacterial flagellin C-terminal helical region JUNP479_0955 PF00669 Bacterial flagellin N-terminal helical region JUNP479_0956 PF13737 Transposase DDE domain JUNP479_0958 PF00665 Integrase core domain JUNP479_0959 PF01527 Transposase JUNP479_0962 PF00700 Bacterial flagellin C-terminal helical region JUNP479_0962 PF00669 Bacterial flagellin N-terminal helical region JUNP479_0963 PF00669 Bacterial flagellin N-terminal helical region JUNP479_0963 PF07196 Flagellin hook IN motif JUNP479_0963 PF00700 Bacterial flagellin C-terminal helical region JUNP479_0964 PF03458 UPF0126 domain JUNP479_0966 PF02568 Thiamine biosynthesis protein (ThiI) JUNP479_0966 PF02926 THUMP domain JUNP479_0969 PF00912 Transglycosylase JUNP479_0969 PF06832 Penicillin-Binding Protein C-terminus Family JUNP479_0969 PF00905 Penicillin binding protein transpeptidase domain JUNP479_0970 PF07678 A-macroglobulin TED domain JUNP479_0970 PF01835 MG2 domain JUNP479_0970 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain JUNP479_0970 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain JUNP479_0970 PF00207 Alpha-2-macroglobulin family JUNP479_0970 PF17962 Bacterial macroglobulin domain 6 JUNP479_0970 PF07703 Alpha-2-macroglobulin bait region domain JUNP479_0970 PF11974 Bacterial alpha-2-macroglobulin MG3 domain JUNP479_0970 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain JUNP479_0972 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JUNP479_0972 PF07992 Pyridine nucleotide-disulphide oxidoreductase JUNP479_0973 PF03707 Bacterial signalling protein N terminal repeat JUNP479_0973 PF00563 EAL domain JUNP479_0973 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_0974 PF04055 Radical SAM superfamily JUNP479_0976 PF07992 Pyridine nucleotide-disulphide oxidoreductase JUNP479_0977 PF05728 Uncharacterised protein family (UPF0227) JUNP479_0978 PF00860 Permease family JUNP479_0979 PF08439 Oligopeptidase F JUNP479_0979 PF01432 Peptidase family M3 JUNP479_0980 PF05661 Protein of unknown function (DUF808) JUNP479_0982 PF00375 Sodium:dicarboxylate symporter family JUNP479_0985 PF01979 Amidohydrolase family JUNP479_0987 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_0987 PF00672 HAMP domain JUNP479_0988 PF01230 HIT domain JUNP479_0995 PF07549 SecD/SecF GG Motif JUNP479_0995 PF02355 Protein export membrane protein JUNP479_0995 PF13721 SecD export protein N-terminal TM region JUNP479_0996 PF07549 SecD/SecF GG Motif JUNP479_0996 PF02355 Protein export membrane protein JUNP479_0997 PF00483 Nucleotidyl transferase JUNP479_0998 PF00793 DAHP synthetase I family JUNP479_0999 PF01817 Chorismate mutase type II JUNP479_0999 PF02153 Prephenate dehydrogenase JUNP479_1001 PF06733 DEAD_2 JUNP479_1001 PF13307 Helicase C-terminal domain JUNP479_1003 PF00850 Histone deacetylase domain JUNP479_1004 PF07690 Major Facilitator Superfamily JUNP479_1006 PF01926 50S ribosome-binding GTPase JUNP479_1007 PF00245 Alkaline phosphatase JUNP479_1008 PF00245 Alkaline phosphatase JUNP479_1011 PF14760 Rnk N-terminus JUNP479_1011 PF01272 Transcription elongation factor, GreA/GreB, C-term JUNP479_1012 PF00196 Bacterial regulatory proteins, luxR family JUNP479_1012 PF00072 Response regulator receiver domain JUNP479_1013 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_1013 PF05231 MASE1 JUNP479_1013 PF07730 Histidine kinase JUNP479_1014 PF07690 Major Facilitator Superfamily JUNP479_1015 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_1016 PF00497 Bacterial extracellular solute-binding proteins, family 3 JUNP479_1017 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_1018 PF00005 ABC transporter JUNP479_1020 PF04116 Fatty acid hydroxylase superfamily JUNP479_1021 PF13520 Amino acid permease JUNP479_1024 PF03471 Transporter associated domain JUNP479_1024 PF00571 CBS domain JUNP479_1024 PF01595 Cyclin M transmembrane N-terminal domain JUNP479_1025 PF01895 PhoU domain JUNP479_1026 PF00005 ABC transporter JUNP479_1027 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_1028 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_1029 PF14437 MafB19-like deaminase JUNP479_1032 PF01274 Malate synthase JUNP479_1033 PF00463 Isocitrate lyase family JUNP479_1034 PF00308 Bacterial dnaA protein JUNP479_1037 PF02769 AIR synthase related protein, C-terminal domain JUNP479_1037 PF00586 AIR synthase related protein, N-terminal domain JUNP479_1038 PF00551 Formyl transferase JUNP479_1039 PF01784 NIF3 (NGG1p interacting factor 3) JUNP479_1040 PF02954 Bacterial regulatory protein, Fis family JUNP479_1040 PF00072 Response regulator receiver domain JUNP479_1040 PF00158 Sigma-54 interaction domain JUNP479_1041 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_1041 PF13188 PAS domain JUNP479_1041 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_1042 PF06490 Flagellar regulatory protein FleQ JUNP479_1042 PF02954 Bacterial regulatory protein, Fis family JUNP479_1042 PF00158 Sigma-54 interaction domain JUNP479_1044 PF01842 ACT domain JUNP479_1045 PF13090 Polyphosphate kinase C-terminal domain 2 JUNP479_1045 PF13089 Polyphosphate kinase N-terminal domain JUNP479_1045 PF17941 Polyphosphate kinase C-terminal domain 1 JUNP479_1045 PF02503 Polyphosphate kinase middle domain JUNP479_1046 PF02541 Ppx/GppA phosphatase family JUNP479_1047 PF01769 Divalent cation transporter JUNP479_1047 PF00571 CBS domain JUNP479_1047 PF03448 MgtE intracellular N domain JUNP479_1048 PF00669 Bacterial flagellin N-terminal helical region JUNP479_1049 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JUNP479_1049 PF07196 Flagellin hook IN motif JUNP479_1050 PF10135 Rod binding protein JUNP479_1050 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JUNP479_1051 PF02119 Flagellar P-ring protein JUNP479_1052 PF02107 Flagellar L-ring protein JUNP479_1053 PF00460 Flagella basal body rod protein JUNP479_1053 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JUNP479_1054 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JUNP479_1054 PF00460 Flagella basal body rod protein JUNP479_1055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JUNP479_1055 PF00460 Flagella basal body rod protein JUNP479_1055 PF07559 Flagellar basal body protein FlaE JUNP479_1056 PF13860 FlgD Ig-like domain JUNP479_1056 PF13861 FlgD Tudor-like domain JUNP479_1056 PF03963 Flagellar hook capping protein - N-terminal region JUNP479_1057 PF00460 Flagella basal body rod protein JUNP479_1057 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JUNP479_1058 PF00460 Flagella basal body rod protein JUNP479_1059 PF03705 CheR methyltransferase, all-alpha domain JUNP479_1059 PF01739 CheR methyltransferase, SAM binding domain JUNP479_1060 PF00072 Response regulator receiver domain JUNP479_1060 PF01584 CheW-like domain JUNP479_1061 PF13144 Chaperone for flagella basal body P-ring formation JUNP479_1064 PF12850 Calcineurin-like phosphoesterase superfamily domain JUNP479_1065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JUNP479_1067 PF00849 RNA pseudouridylate synthase JUNP479_1067 PF01479 S4 domain JUNP479_1068 PF01966 HD domain JUNP479_1068 PF11871 Domain of unknown function (DUF3391) JUNP479_1070 PF00923 Transaldolase/Fructose-6-phosphate aldolase JUNP479_1071 PF04055 Radical SAM superfamily JUNP479_1072 PF01228 Glycine radical JUNP479_1072 PF02901 Pyruvate formate lyase-like JUNP479_1073 PF08220 DeoR-like helix-turn-helix domain JUNP479_1073 PF00455 DeoR C terminal sensor domain JUNP479_1074 PF00892 EamA-like transporter family JUNP479_1075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JUNP479_1080 PF00313 'Cold-shock' DNA-binding domain JUNP479_1081 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JUNP479_1081 PF02817 e3 binding domain JUNP479_1081 PF00364 Biotin-requiring enzyme JUNP479_1082 PF02780 Transketolase, C-terminal domain JUNP479_1082 PF02779 Transketolase, pyrimidine binding domain JUNP479_1083 PF00676 Dehydrogenase E1 component JUNP479_1085 PF00501 AMP-binding enzyme JUNP479_1085 PF00668 Condensation domain JUNP479_1085 PF00550 Phosphopantetheine attachment site JUNP479_1085 PF00975 Thioesterase domain JUNP479_1087 PF00857 Isochorismatase family JUNP479_1087 PF00550 Phosphopantetheine attachment site JUNP479_1088 PF00501 AMP-binding enzyme JUNP479_1088 PF13193 AMP-binding enzyme C-terminal domain JUNP479_1089 PF00425 chorismate binding enzyme JUNP479_1090 PF07715 TonB-dependent Receptor Plug Domain JUNP479_1090 PF00593 TonB dependent receptor JUNP479_1091 PF00793 DAHP synthetase I family JUNP479_1092 PF00356 Bacterial regulatory proteins, lacI family JUNP479_1093 PF14718 Soluble lytic murein transglycosylase L domain JUNP479_1093 PF01464 Transglycosylase SLT domain JUNP479_1094 PF03707 Bacterial signalling protein N terminal repeat JUNP479_1094 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_1094 PF00563 EAL domain JUNP479_1096 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JUNP479_1100 PF04357 TamB, inner membrane protein subunit of TAM complex JUNP479_1101 PF17243 POTRA domain TamA domain 1 JUNP479_1101 PF01103 Surface antigen JUNP479_1101 PF07244 Surface antigen variable number repeat JUNP479_1105 PF02627 Carboxymuconolactone decarboxylase family JUNP479_1106 PF00403 Heavy-metal-associated domain JUNP479_1106 PF07992 Pyridine nucleotide-disulphide oxidoreductase JUNP479_1106 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JUNP479_1107 PF13416 Bacterial extracellular solute-binding protein JUNP479_1108 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_1109 PF00005 ABC transporter JUNP479_1110 PF01066 CDP-alcohol phosphatidyltransferase JUNP479_1111 PF13406 Transglycosylase SLT domain JUNP479_1112 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JUNP479_1112 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JUNP479_1112 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JUNP479_1112 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JUNP479_1113 PF17206 SeqA protein N-terminal domain JUNP479_1113 PF03925 SeqA protein C-terminal domain JUNP479_1114 PF12697 Alpha/beta hydrolase family JUNP479_1116 PF01402 Ribbon-helix-helix protein, copG family JUNP479_1117 PF00258 Flavodoxin JUNP479_1119 PF01475 Ferric uptake regulator family JUNP479_1120 PF00749 tRNA synthetases class I (E and Q), catalytic domain JUNP479_1120 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JUNP479_1121 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain JUNP479_1121 PF03173 Putative carbohydrate binding domain JUNP479_1121 PF02838 Glycosyl hydrolase family 20, domain 2 JUNP479_1121 PF00728 Glycosyl hydrolase family 20, catalytic domain JUNP479_1122 PF02378 Phosphotransferase system, EIIC JUNP479_1122 PF00367 phosphotransferase system, EIIB JUNP479_1122 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JUNP479_1123 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JUNP479_1124 PF01979 Amidohydrolase family JUNP479_1125 PF01047 MarR family JUNP479_1125 PF00480 ROK family JUNP479_1126 PF13737 Transposase DDE domain JUNP479_1127 PF13737 Transposase DDE domain JUNP479_1131 PF00534 Glycosyl transferases group 1 JUNP479_1132 PF00501 AMP-binding enzyme JUNP479_1132 PF13193 AMP-binding enzyme C-terminal domain JUNP479_1132 PF00668 Condensation domain JUNP479_1132 PF00550 Phosphopantetheine attachment site JUNP479_1133 PF00109 Beta-ketoacyl synthase, N-terminal domain JUNP479_1133 PF00550 Phosphopantetheine attachment site JUNP479_1133 PF02801 Beta-ketoacyl synthase, C-terminal domain JUNP479_1133 PF16197 Ketoacyl-synthetase C-terminal extension JUNP479_1133 PF00668 Condensation domain JUNP479_1133 PF00698 Acyl transferase domain JUNP479_1134 PF00501 AMP-binding enzyme JUNP479_1134 PF00975 Thioesterase domain JUNP479_1134 PF00550 Phosphopantetheine attachment site JUNP479_1134 PF00668 Condensation domain JUNP479_1134 PF13193 AMP-binding enzyme C-terminal domain JUNP479_1135 PF02838 Glycosyl hydrolase family 20, domain 2 JUNP479_1135 PF03173 Putative carbohydrate binding domain JUNP479_1135 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain JUNP479_1135 PF00728 Glycosyl hydrolase family 20, catalytic domain JUNP479_1136 PF08019 Phosphoethanolamine transferase EptA/EptB JUNP479_1136 PF00884 Sulfatase JUNP479_1137 PF01966 HD domain JUNP479_1139 PF07694 5TMR of 5TMR-LYT JUNP479_1139 PF06580 Histidine kinase JUNP479_1140 PF00072 Response regulator receiver domain JUNP479_1140 PF04397 LytTr DNA-binding domain JUNP479_1141 PF02554 Carbon starvation protein CstA JUNP479_1142 PF11742 Protein of unknown function (DUF3302) JUNP479_1143 PF00529 HlyD membrane-fusion protein of T1SS JUNP479_1143 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JUNP479_1144 PF00271 Helicase conserved C-terminal domain JUNP479_1144 PF04851 Type III restriction enzyme, res subunit JUNP479_1145 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JUNP479_1146 PF00462 Glutaredoxin JUNP479_1147 PF03372 Endonuclease/Exonuclease/phosphatase family JUNP479_1149 PF03061 Thioesterase superfamily JUNP479_1150 PF01370 NAD dependent epimerase/dehydratase family JUNP479_1152 PF10371 Domain of unknown function JUNP479_1152 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JUNP479_1152 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JUNP479_1152 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JUNP479_1152 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JUNP479_1153 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JUNP479_1153 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JUNP479_1153 PF07992 Pyridine nucleotide-disulphide oxidoreductase JUNP479_1154 PF03476 MOSC N-terminal beta barrel domain JUNP479_1154 PF00111 2Fe-2S iron-sulfur cluster binding domain JUNP479_1154 PF03476 MOSC N-terminal beta barrel domain JUNP479_1154 PF03473 MOSC domain JUNP479_1154 PF00111 2Fe-2S iron-sulfur cluster binding domain JUNP479_1154 PF03473 MOSC domain JUNP479_1155 PF01435 Peptidase family M48 JUNP479_1157 PF12697 Alpha/beta hydrolase family JUNP479_1157 PF08241 Methyltransferase domain JUNP479_1158 PF00155 Aminotransferase class I and II JUNP479_1159 PF06968 Biotin and Thiamin Synthesis associated domain JUNP479_1159 PF04055 Radical SAM superfamily JUNP479_1160 PF00202 Aminotransferase class-III JUNP479_1163 PF00152 tRNA synthetases class II (D, K and N) JUNP479_1163 PF01336 OB-fold nucleic acid binding domain JUNP479_1165 PF03605 Anaerobic c4-dicarboxylate membrane transporter JUNP479_1168 PF07687 Peptidase dimerisation domain JUNP479_1168 PF01546 Peptidase family M20/M25/M40 JUNP479_1169 PF03606 C4-dicarboxylate anaerobic carrier JUNP479_1172 PF03960 ArsC family JUNP479_1173 PF01546 Peptidase family M20/M25/M40 JUNP479_1173 PF07687 Peptidase dimerisation domain JUNP479_1174 PF02557 D-alanyl-D-alanine carboxypeptidase JUNP479_1176 PF02080 TrkA-C domain JUNP479_1176 PF00999 Sodium/hydrogen exchanger family JUNP479_1176 PF03471 Transporter associated domain JUNP479_1178 PF00999 Sodium/hydrogen exchanger family JUNP479_1178 PF02080 TrkA-C domain JUNP479_1178 PF03471 Transporter associated domain JUNP479_1179 PF01810 LysE type translocator JUNP479_1180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_1180 PF00672 HAMP domain JUNP479_1180 PF12729 Four helix bundle sensory module for signal transduction JUNP479_1181 PF07509 Protein of unknown function (DUF1523) JUNP479_1184 PF01156 Inosine-uridine preferring nucleoside hydrolase JUNP479_1185 PF00849 RNA pseudouridylate synthase JUNP479_1186 PF01048 Phosphorylase superfamily JUNP479_1187 PF00465 Iron-containing alcohol dehydrogenase JUNP479_1188 PF04355 SmpA / OmlA family JUNP479_1189 PF13460 NAD(P)H-binding JUNP479_1191 PF10437 Bacterial lipoate protein ligase C-terminus JUNP479_1191 PF03099 Biotin/lipoate A/B protein ligase family JUNP479_1192 PF00563 EAL domain JUNP479_1192 PF13426 PAS domain JUNP479_1192 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_1193 PF00873 AcrB/AcrD/AcrF family JUNP479_1196 PF04143 Sulphur transport JUNP479_1199 PF07992 Pyridine nucleotide-disulphide oxidoreductase JUNP479_1201 PF02308 MgtC family JUNP479_1202 PF01556 DnaJ C terminal domain JUNP479_1202 PF00226 DnaJ domain JUNP479_1202 PF00684 DnaJ central domain JUNP479_1203 PF00012 Hsp70 protein JUNP479_1204 PF01025 GrpE JUNP479_1205 PF01513 ATP-NAD kinase JUNP479_1207 PF03466 LysR substrate binding domain JUNP479_1207 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_1208 PF02056 Family 4 glycosyl hydrolase JUNP479_1208 PF11975 Family 4 glycosyl hydrolase C-terminal domain JUNP479_1209 PF02463 RecF/RecN/SMC N terminal domain JUNP479_1210 PF02833 DHHA2 domain JUNP479_1210 PF01368 DHH family JUNP479_1211 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JUNP479_1212 PF00005 ABC transporter JUNP479_1212 PF02687 FtsX-like permease family JUNP479_1212 PF12704 MacB-like periplasmic core domain JUNP479_1213 PF02321 Outer membrane efflux protein JUNP479_1214 PF00816 H-NS histone family JUNP479_1216 PF02706 Chain length determinant protein JUNP479_1217 PF00483 Nucleotidyl transferase JUNP479_1218 PF00483 Nucleotidyl transferase JUNP479_1219 PF00483 Nucleotidyl transferase JUNP479_1220 PF04321 RmlD substrate binding domain JUNP479_1221 PF16363 GDP-mannose 4,6 dehydratase JUNP479_1222 PF16363 GDP-mannose 4,6 dehydratase JUNP479_1223 PF02719 Polysaccharide biosynthesis protein JUNP479_1224 PF02397 Bacterial sugar transferase JUNP479_1225 PF01370 NAD dependent epimerase/dehydratase family JUNP479_1227 PF02350 UDP-N-acetylglucosamine 2-epimerase JUNP479_1228 PF04321 RmlD substrate binding domain JUNP479_1229 PF02719 Polysaccharide biosynthesis protein JUNP479_1229 PF08485 Polysaccharide biosynthesis protein C-terminal JUNP479_1232 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JUNP479_1232 PF00535 Glycosyl transferase family 2 JUNP479_1234 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JUNP479_1235 PF01370 NAD dependent epimerase/dehydratase family JUNP479_1235 PF00551 Formyl transferase JUNP479_1235 PF02911 Formyl transferase, C-terminal domain JUNP479_1236 PF05523 WxcM-like, C-terminal JUNP479_1237 PF00483 Nucleotidyl transferase JUNP479_1238 PF16363 GDP-mannose 4,6 dehydratase JUNP479_1239 PF00873 AcrB/AcrD/AcrF family JUNP479_1240 PF00529 HlyD membrane-fusion protein of T1SS JUNP479_1240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JUNP479_1241 PF08361 MAATS-type transcriptional repressor, C-terminal region JUNP479_1241 PF00440 Bacterial regulatory proteins, tetR family JUNP479_1245 PF00072 Response regulator receiver domain JUNP479_1246 PF00919 Uncharacterized protein family UPF0004 JUNP479_1246 PF04055 Radical SAM superfamily JUNP479_1246 PF18693 TRAM domain JUNP479_1251 PF01048 Phosphorylase superfamily JUNP479_1255 PF00291 Pyridoxal-phosphate dependent enzyme JUNP479_1255 PF14821 Threonine synthase N terminus JUNP479_1256 PF00288 GHMP kinases N terminal domain JUNP479_1256 PF08544 GHMP kinases C terminal JUNP479_1257 PF00742 Homoserine dehydrogenase JUNP479_1257 PF03447 Homoserine dehydrogenase, NAD binding domain JUNP479_1257 PF13840 ACT domain JUNP479_1257 PF01842 ACT domain JUNP479_1257 PF00696 Amino acid kinase family JUNP479_1258 PF00588 SpoU rRNA Methylase family JUNP479_1259 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) JUNP479_1262 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JUNP479_1263 PF02641 Uncharacterized ACR, COG1993 JUNP479_1265 PF04829 Pre-toxin domain with VENN motif JUNP479_1265 PF05860 haemagglutination activity domain JUNP479_1265 PF13332 Hemagglutinin repeat JUNP479_1272 PF01479 S4 domain JUNP479_1272 PF00849 RNA pseudouridylate synthase JUNP479_1273 PF04079 Segregation and condensation complex subunit ScpB JUNP479_1274 PF02616 Segregation and condensation protein ScpA JUNP479_1275 PF01300 Telomere recombination JUNP479_1276 PF02811 PHP domain JUNP479_1277 PF00425 chorismate binding enzyme JUNP479_1277 PF04715 Anthranilate synthase component I, N terminal region JUNP479_1278 PF00591 Glycosyl transferase family, a/b domain JUNP479_1278 PF00117 Glutamine amidotransferase class-I JUNP479_1278 PF02885 Glycosyl transferase family, helical bundle domain JUNP479_1279 PF02885 Glycosyl transferase family, helical bundle domain JUNP479_1279 PF00591 Glycosyl transferase family, a/b domain JUNP479_1280 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JUNP479_1280 PF00218 Indole-3-glycerol phosphate synthase JUNP479_1281 PF00291 Pyridoxal-phosphate dependent enzyme JUNP479_1282 PF00290 Tryptophan synthase alpha chain JUNP479_1289 PF04307 LexA-binding, inner membrane-associated putative hydrolase JUNP479_1293 PF07670 Nucleoside recognition JUNP479_1293 PF01773 Na+ dependent nucleoside transporter N-terminus JUNP479_1293 PF07662 Na+ dependent nucleoside transporter C-terminus JUNP479_1294 PF03960 ArsC family JUNP479_1295 PF01758 Sodium Bile acid symporter family JUNP479_1296 PF02374 Anion-transporting ATPase JUNP479_1297 PF06953 Arsenical resistance operon trans-acting repressor ArsD JUNP479_1301 PF03737 Aldolase/RraA JUNP479_1303 PF00072 Response regulator receiver domain JUNP479_1303 PF00486 Transcriptional regulatory protein, C terminal JUNP479_1306 PF00005 ABC transporter JUNP479_1306 PF00664 ABC transporter transmembrane region JUNP479_1307 PF00005 ABC transporter JUNP479_1307 PF00664 ABC transporter transmembrane region JUNP479_1311 PF01980 tRNA-methyltransferase O JUNP479_1311 PF18389 TrmO C-terminal domain JUNP479_1314 PF00486 Transcriptional regulatory protein, C terminal JUNP479_1314 PF00072 Response regulator receiver domain JUNP479_1315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_1317 PF05656 Protein of unknown function (DUF805) JUNP479_1322 PF01266 FAD dependent oxidoreductase JUNP479_1323 PF01381 Helix-turn-helix JUNP479_1323 PF07883 Cupin domain JUNP479_1324 PF00171 Aldehyde dehydrogenase family JUNP479_1325 PF00202 Aminotransferase class-III JUNP479_1326 PF00324 Amino acid permease JUNP479_1329 PF00324 Amino acid permease JUNP479_1331 PF02690 Na+/Pi-cotransporter JUNP479_1332 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JUNP479_1332 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JUNP479_1333 PF04381 Putative exonuclease, RdgC JUNP479_1335 PF12320 Type 5 capsule protein repressor C-terminal domain JUNP479_1335 PF00149 Calcineurin-like phosphoesterase JUNP479_1336 PF13476 AAA domain JUNP479_1337 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JUNP479_1339 PF00224 Pyruvate kinase, barrel domain JUNP479_1339 PF02887 Pyruvate kinase, alpha/beta domain JUNP479_1340 PF12794 Mechanosensitive ion channel inner membrane domain 1 JUNP479_1340 PF12795 Mechanosensitive ion channel porin domain JUNP479_1340 PF00924 Mechanosensitive ion channel JUNP479_1341 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_1341 PF08448 PAS fold JUNP479_1342 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JUNP479_1343 PF05524 PEP-utilising enzyme, N-terminal JUNP479_1343 PF02896 PEP-utilising enzyme, TIM barrel domain JUNP479_1343 PF00391 PEP-utilising enzyme, mobile domain JUNP479_1344 PF00381 PTS HPr component phosphorylation site JUNP479_1345 PF00291 Pyridoxal-phosphate dependent enzyme JUNP479_1346 PF00004 ATPase family associated with various cellular activities (AAA) JUNP479_1346 PF01434 Peptidase family M41 JUNP479_1346 PF17862 AAA+ lid domain JUNP479_1348 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JUNP479_1348 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JUNP479_1349 PF00672 HAMP domain JUNP479_1349 PF01966 HD domain JUNP479_1350 PF13401 AAA domain JUNP479_1350 PF01471 Putative peptidoglycan binding domain JUNP479_1351 PF16537 Type II secretion system protein B JUNP479_1352 PF11356 Type II secretion system protein C JUNP479_1353 PF03958 Bacterial type II/III secretion system short domain JUNP479_1353 PF00263 Bacterial type II and III secretion system protein JUNP479_1354 PF00437 Type II/IV secretion system protein JUNP479_1355 PF00482 Type II secretion system (T2SS), protein F JUNP479_1356 PF07963 Prokaryotic N-terminal methylation motif JUNP479_1356 PF08334 Type II secretion system (T2SS), protein G JUNP479_1357 PF07963 Prokaryotic N-terminal methylation motif JUNP479_1357 PF12019 Type II transport protein GspH JUNP479_1358 PF07963 Prokaryotic N-terminal methylation motif JUNP479_1358 PF02501 Type II secretion system (T2SS), protein I JUNP479_1359 PF11612 Type II secretion system (T2SS), protein J JUNP479_1359 PF07963 Prokaryotic N-terminal methylation motif JUNP479_1360 PF03934 Type II secretion system (T2SS), protein K JUNP479_1361 PF05134 Type II secretion system (T2SS), protein L JUNP479_1361 PF12693 GspL periplasmic domain JUNP479_1362 PF04612 Type II secretion system (T2SS), protein M JUNP479_1363 PF01203 Type II secretion system (T2SS), protein N JUNP479_1364 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JUNP479_1365 PF00596 Class II Aldolase and Adducin N-terminal domain JUNP479_1366 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JUNP479_1367 PF03611 PTS system sugar-specific permease component JUNP479_1370 PF01261 Xylose isomerase-like TIM barrel JUNP479_1371 PF08220 DeoR-like helix-turn-helix domain JUNP479_1371 PF00455 DeoR C terminal sensor domain JUNP479_1373 PF01027 Inhibitor of apoptosis-promoting Bax1 JUNP479_1374 PF12805 FUSC-like inner membrane protein yccS JUNP479_1375 PF04358 DsrC like protein JUNP479_1376 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JUNP479_1378 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_1378 PF03466 LysR substrate binding domain JUNP479_1380 PF04151 Bacterial pre-peptidase C-terminal domain JUNP479_1380 PF04389 Peptidase family M28 JUNP479_1382 PF08497 Radical SAM N-terminal JUNP479_1382 PF04055 Radical SAM superfamily JUNP479_1382 PF11842 Domain of unknown function (DUF3362) JUNP479_1383 PF00873 AcrB/AcrD/AcrF family JUNP479_1384 PF00529 HlyD membrane-fusion protein of T1SS JUNP479_1384 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JUNP479_1385 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_1385 PF17158 Membrane-associated sensor, integral membrane domain JUNP479_1386 PF01734 Patatin-like phospholipase JUNP479_1387 PF00209 Sodium:neurotransmitter symporter family JUNP479_1390 PF01389 OmpA-like transmembrane domain JUNP479_1390 PF00691 OmpA family JUNP479_1391 PF01389 OmpA-like transmembrane domain JUNP479_1391 PF00691 OmpA family JUNP479_1393 PF03949 Malic enzyme, NAD binding domain JUNP479_1393 PF00390 Malic enzyme, N-terminal domain JUNP479_1394 PF12833 Helix-turn-helix domain JUNP479_1395 PF01554 MatE JUNP479_1396 PF10692 Protein of unknown function (DUF2498) JUNP479_1397 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_1398 PF00860 Permease family JUNP479_1399 PF01235 Sodium:alanine symporter family JUNP479_1400 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JUNP479_1400 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JUNP479_1401 PF01699 Sodium/calcium exchanger protein JUNP479_1402 PF08534 Redoxin JUNP479_1402 PF00462 Glutaredoxin JUNP479_1405 PF00293 NUDIX domain JUNP479_1409 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JUNP479_1409 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JUNP479_1410 PF03932 CutC family JUNP479_1411 PF00480 ROK family JUNP479_1413 PF01435 Peptidase family M48 JUNP479_1414 PF12849 PBP superfamily domain JUNP479_1415 PF00989 PAS fold JUNP479_1415 PF11808 Phosphate regulon sensor protein PhoR JUNP479_1415 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_1415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_1416 PF00072 Response regulator receiver domain JUNP479_1416 PF00486 Transcriptional regulatory protein, C terminal JUNP479_1417 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JUNP479_1418 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_1418 PF17158 Membrane-associated sensor, integral membrane domain JUNP479_1420 PF00892 EamA-like transporter family JUNP479_1421 PF00072 Response regulator receiver domain JUNP479_1421 PF12431 Transcriptional regulator JUNP479_1422 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_1422 PF00989 PAS fold JUNP479_1422 PF17203 Single cache domain 3 JUNP479_1422 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JUNP479_1423 PF03949 Malic enzyme, NAD binding domain JUNP479_1423 PF00390 Malic enzyme, N-terminal domain JUNP479_1424 PF03390 2-hydroxycarboxylate transporter family JUNP479_1426 PF01047 MarR family JUNP479_1427 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JUNP479_1427 PF00529 HlyD membrane-fusion protein of T1SS JUNP479_1433 PF13597 Anaerobic ribonucleoside-triphosphate reductase JUNP479_1433 PF03477 ATP cone domain JUNP479_1435 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JUNP479_1435 PF03120 NAD-dependent DNA ligase OB-fold domain JUNP479_1435 PF01653 NAD-dependent DNA ligase adenylation domain JUNP479_1435 PF12826 Helix-hairpin-helix motif JUNP479_1435 PF00533 BRCA1 C Terminus (BRCT) domain JUNP479_1436 PF04354 ZipA, C-terminal FtsZ-binding domain JUNP479_1437 PF02463 RecF/RecN/SMC N terminal domain JUNP479_1437 PF06470 SMC proteins Flexible Hinge Domain JUNP479_1439 PF03458 UPF0126 domain JUNP479_1441 PF05951 Bacterial protein of unknown function (DUF882) JUNP479_1442 PF01471 Putative peptidoglycan binding domain JUNP479_1442 PF03734 L,D-transpeptidase catalytic domain JUNP479_1445 PF00535 Glycosyl transferase family 2 JUNP479_1448 PF00128 Alpha amylase, catalytic domain JUNP479_1450 PF00196 Bacterial regulatory proteins, luxR family JUNP479_1450 PF00072 Response regulator receiver domain JUNP479_1454 PF02254 TrkA-N domain JUNP479_1454 PF00999 Sodium/hydrogen exchanger family JUNP479_1454 PF02080 TrkA-C domain JUNP479_1456 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_1457 PF01171 PP-loop family JUNP479_1457 PF09179 TilS substrate binding domain JUNP479_1457 PF11734 TilS substrate C-terminal domain JUNP479_1458 PF05649 Peptidase family M13 JUNP479_1458 PF01431 Peptidase family M13 JUNP479_1460 PF08543 Phosphomethylpyrimidine kinase JUNP479_1461 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JUNP479_1461 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JUNP479_1461 PF01276 Orn/Lys/Arg decarboxylase, major domain JUNP479_1462 PF13520 Amino acid permease JUNP479_1463 PF18500 CadC C-terminal domain 1 JUNP479_1463 PF00486 Transcriptional regulatory protein, C terminal JUNP479_1464 PF16326 ABC transporter C-terminal domain JUNP479_1464 PF00005 ABC transporter JUNP479_1464 PF12848 ABC transporter JUNP479_1465 PF13302 Acetyltransferase (GNAT) domain JUNP479_1466 PF13520 Amino acid permease JUNP479_1467 PF03466 LysR substrate binding domain JUNP479_1467 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_1468 PF12706 Beta-lactamase superfamily domain JUNP479_1472 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_1472 PF03466 LysR substrate binding domain JUNP479_1474 PF00205 Thiamine pyrophosphate enzyme, central domain JUNP479_1474 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JUNP479_1474 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JUNP479_1475 PF03306 Alpha-acetolactate decarboxylase JUNP479_1476 PF03466 LysR substrate binding domain JUNP479_1476 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_1477 PF00579 tRNA synthetases class I (W and Y) JUNP479_1478 PF08525 Opacity-associated protein A N-terminal motif JUNP479_1478 PF01476 LysM domain JUNP479_1478 PF01551 Peptidase family M23 JUNP479_1479 PF03702 Anhydro-N-acetylmuramic acid kinase JUNP479_1481 PF01042 Endoribonuclease L-PSP JUNP479_1483 PF01965 DJ-1/PfpI family JUNP479_1485 PF00550 Phosphopantetheine attachment site JUNP479_1485 PF08659 KR domain JUNP479_1485 PF16197 Ketoacyl-synthetase C-terminal extension JUNP479_1485 PF14765 Polyketide synthase dehydratase JUNP479_1485 PF02801 Beta-ketoacyl synthase, C-terminal domain JUNP479_1485 PF00109 Beta-ketoacyl synthase, N-terminal domain JUNP479_1485 PF00698 Acyl transferase domain JUNP479_1485 PF08240 Alcohol dehydrogenase GroES-like domain JUNP479_1487 PF02780 Transketolase, C-terminal domain JUNP479_1487 PF00456 Transketolase, thiamine diphosphate binding domain JUNP479_1487 PF02779 Transketolase, pyrimidine binding domain JUNP479_1488 PF02773 S-adenosylmethionine synthetase, C-terminal domain JUNP479_1488 PF02772 S-adenosylmethionine synthetase, central domain JUNP479_1488 PF00438 S-adenosylmethionine synthetase, N-terminal domain JUNP479_1489 PF10263 SprT-like family JUNP479_1489 PF17283 SprT-like zinc ribbon domain JUNP479_1490 PF04231 Endonuclease I JUNP479_1491 PF04452 RNA methyltransferase JUNP479_1492 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JUNP479_1492 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JUNP479_1493 PF12729 Four helix bundle sensory module for signal transduction JUNP479_1493 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_1493 PF00672 HAMP domain JUNP479_1494 PF02622 Uncharacterized ACR, COG1678 JUNP479_1495 PF03652 Holliday junction resolvase JUNP479_1496 PF00854 POT family JUNP479_1498 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_1498 PF03466 LysR substrate binding domain JUNP479_1500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_1500 PF03466 LysR substrate binding domain JUNP479_1501 PF07690 Major Facilitator Superfamily JUNP479_1502 PF00144 Beta-lactamase JUNP479_1503 PF17863 AAA lid domain JUNP479_1503 PF07726 ATPase family associated with various cellular activities (AAA) JUNP479_1505 PF11992 Domain of unknown function (DUF3488) JUNP479_1505 PF13559 Domain of unknown function (DUF4129) JUNP479_1505 PF01841 Transglutaminase-like superfamily JUNP479_1506 PF01235 Sodium:alanine symporter family JUNP479_1507 PF00923 Transaldolase/Fructose-6-phosphate aldolase JUNP479_1509 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JUNP479_1510 PF01336 OB-fold nucleic acid binding domain JUNP479_1510 PF07733 Bacterial DNA polymerase III alpha NTPase domain JUNP479_1510 PF02811 PHP domain JUNP479_1510 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JUNP479_1510 PF14579 Helix-hairpin-helix motif JUNP479_1511 PF01351 Ribonuclease HII JUNP479_1512 PF02684 Lipid-A-disaccharide synthetase JUNP479_1513 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JUNP479_1513 PF00132 Bacterial transferase hexapeptide (six repeats) JUNP479_1514 PF07977 FabA-like domain JUNP479_1515 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JUNP479_1515 PF00132 Bacterial transferase hexapeptide (six repeats) JUNP479_1516 PF03938 Outer membrane protein (OmpH-like) JUNP479_1517 PF07244 Surface antigen variable number repeat JUNP479_1517 PF01103 Surface antigen JUNP479_1518 PF02163 Peptidase family M50 JUNP479_1518 PF17820 PDZ domain JUNP479_1519 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JUNP479_1519 PF13288 DXP reductoisomerase C-terminal domain JUNP479_1519 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JUNP479_1521 PF01255 Putative undecaprenyl diphosphate synthase JUNP479_1522 PF01765 Ribosome recycling factor JUNP479_1523 PF00696 Amino acid kinase family JUNP479_1524 PF00889 Elongation factor TS JUNP479_1525 PF00318 Ribosomal protein S2 JUNP479_1526 PF00557 Metallopeptidase family M24 JUNP479_1527 PF01909 Nucleotidyltransferase domain JUNP479_1527 PF01842 ACT domain JUNP479_1527 PF01966 HD domain JUNP479_1527 PF08335 GlnD PII-uridylyltransferase JUNP479_1528 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JUNP479_1528 PF14602 Hexapeptide repeat of succinyl-transferase JUNP479_1528 PF00132 Bacterial transferase hexapeptide (six repeats) JUNP479_1529 PF11944 Protein of unknown function (DUF3461) JUNP479_1530 PF02378 Phosphotransferase system, EIIC JUNP479_1530 PF00367 phosphotransferase system, EIIB JUNP479_1531 PF07148 Maltose operon periplasmic protein precursor (MalM) JUNP479_1532 PF02264 LamB porin JUNP479_1533 PF00258 Flavodoxin JUNP479_1534 PF00849 RNA pseudouridylate synthase JUNP479_1535 PF04287 tRNA pseudouridine synthase C JUNP479_1540 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) JUNP479_1541 PF07348 Syd protein (SUKH-2) JUNP479_1542 PF14489 QueF-like protein JUNP479_1542 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JUNP479_1544 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_1545 PF03641 Possible lysine decarboxylase JUNP479_1545 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases JUNP479_1545 PF11892 Domain of unknown function (DUF3412) JUNP479_1546 PF01367 5'-3' exonuclease, C-terminal SAM fold JUNP479_1546 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JUNP479_1547 PF18324 Hypothetical protein TT1725 JUNP479_1547 PF00180 Isocitrate/isopropylmalate dehydrogenase JUNP479_1549 PF01728 FtsJ-like methyltransferase JUNP479_1549 PF18125 RlmM ferredoxin-like domain JUNP479_1550 PF04241 Protein of unknown function (DUF423) JUNP479_1552 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_1552 PF03466 LysR substrate binding domain JUNP479_1553 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_1553 PF00672 HAMP domain JUNP479_1554 PF11798 IMS family HHH motif JUNP479_1554 PF11799 impB/mucB/samB family C-terminal domain JUNP479_1554 PF00817 impB/mucB/samB family JUNP479_1556 PF01965 DJ-1/PfpI family JUNP479_1557 PF08546 Ketopantoate reductase PanE/ApbA C terminal JUNP479_1557 PF02558 Ketopantoate reductase PanE/ApbA JUNP479_1558 PF04461 Protein of unknown function (DUF520) JUNP479_1559 PF03502 Nucleoside-specific channel-forming protein, Tsx JUNP479_1560 PF07690 Major Facilitator Superfamily JUNP479_1561 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JUNP479_1563 PF05175 Methyltransferase small domain JUNP479_1564 PF01722 BolA-like protein JUNP479_1565 PF11973 NQRA C-terminal domain JUNP479_1565 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) JUNP479_1566 PF03116 NQR2, RnfD, RnfE family JUNP479_1567 PF04205 FMN-binding domain JUNP479_1568 PF02508 Rnf-Nqr subunit, membrane protein JUNP479_1569 PF02508 Rnf-Nqr subunit, membrane protein JUNP479_1570 PF00175 Oxidoreductase NAD-binding domain JUNP479_1570 PF00111 2Fe-2S iron-sulfur cluster binding domain JUNP479_1570 PF00970 Oxidoreductase FAD-binding domain JUNP479_1571 PF02424 ApbE family JUNP479_1580 PF00106 short chain dehydrogenase JUNP479_1582 PF00875 DNA photolyase JUNP479_1582 PF03441 FAD binding domain of DNA photolyase JUNP479_1583 PF13411 MerR HTH family regulatory protein JUNP479_1584 PF08349 Protein of unknown function (DUF1722) JUNP479_1587 PF06508 Queuosine biosynthesis protein QueC JUNP479_1590 PF00800 Prephenate dehydratase JUNP479_1590 PF01817 Chorismate mutase type II JUNP479_1596 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_1596 PF16591 Helical bimodular sensor domain JUNP479_1596 PF00672 HAMP domain JUNP479_1598 PF03573 outer membrane porin, OprD family JUNP479_1599 PF00106 short chain dehydrogenase JUNP479_1604 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JUNP479_1606 PF00730 HhH-GPD superfamily base excision DNA repair protein JUNP479_1606 PF06029 AlkA N-terminal domain JUNP479_1606 PF02805 Metal binding domain of Ada JUNP479_1606 PF12833 Helix-turn-helix domain JUNP479_1607 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JUNP479_1607 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JUNP479_1608 PF02872 5'-nucleotidase, C-terminal domain JUNP479_1608 PF00149 Calcineurin-like phosphoesterase JUNP479_1609 PF01136 Peptidase family U32 JUNP479_1609 PF12392 Collagenase JUNP479_1610 PF01810 LysE type translocator JUNP479_1611 PF03466 LysR substrate binding domain JUNP479_1611 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_1612 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JUNP479_1612 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JUNP479_1613 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_1613 PF02743 Cache domain JUNP479_1613 PF00672 HAMP domain JUNP479_1614 PF00072 Response regulator receiver domain JUNP479_1616 PF01627 Hpt domain JUNP479_1616 PF01584 CheW-like domain JUNP479_1616 PF02895 Signal transducing histidine kinase, homodimeric domain JUNP479_1616 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_1616 PF07194 P2 response regulator binding domain JUNP479_1617 PF12729 Four helix bundle sensory module for signal transduction JUNP479_1617 PF00672 HAMP domain JUNP479_1617 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_1618 PF01584 CheW-like domain JUNP479_1619 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_1619 PF00672 HAMP domain JUNP479_1620 PF03705 CheR methyltransferase, all-alpha domain JUNP479_1620 PF01739 CheR methyltransferase, SAM binding domain JUNP479_1621 PF03975 CheD chemotactic sensory transduction JUNP479_1622 PF01339 CheB methylesterase JUNP479_1622 PF00072 Response regulator receiver domain JUNP479_1623 PF00575 S1 RNA binding domain JUNP479_1623 PF03725 3' exoribonuclease family, domain 2 JUNP479_1623 PF01138 3' exoribonuclease family, domain 1 JUNP479_1623 PF00013 KH domain JUNP479_1623 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JUNP479_1624 PF00312 Ribosomal protein S15 JUNP479_1625 PF09157 Pseudouridine synthase II TruB, C-terminal JUNP479_1625 PF16198 tRNA pseudouridylate synthase B C-terminal domain JUNP479_1625 PF01509 TruB family pseudouridylate synthase (N terminal domain) JUNP479_1626 PF02033 Ribosome-binding factor A JUNP479_1627 PF11987 Translation-initiation factor 2 JUNP479_1627 PF04760 Translation initiation factor IF-2, N-terminal region JUNP479_1627 PF00009 Elongation factor Tu GTP binding domain JUNP479_1627 PF08364 Bacterial translation initiation factor IF-2 associated region JUNP479_1628 PF13184 NusA-like KH domain JUNP479_1628 PF08529 NusA N-terminal domain JUNP479_1628 PF00575 S1 RNA binding domain JUNP479_1629 PF17384 RimP C-terminal SH3 domain JUNP479_1629 PF02576 RimP N-terminal domain JUNP479_1632 PF03840 Preprotein translocase SecG subunit JUNP479_1633 PF00121 Triosephosphate isomerase JUNP479_1634 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JUNP479_1634 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JUNP479_1634 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JUNP479_1634 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JUNP479_1635 PF00809 Pterin binding enzyme JUNP479_1636 PF00004 ATPase family associated with various cellular activities (AAA) JUNP479_1636 PF06480 FtsH Extracellular JUNP479_1636 PF01434 Peptidase family M41 JUNP479_1636 PF17862 AAA+ lid domain JUNP479_1637 PF01728 FtsJ-like methyltransferase JUNP479_1638 PF01985 CRS1 / YhbY (CRM) domain JUNP479_1640 PF01272 Transcription elongation factor, GreA/GreB, C-term JUNP479_1640 PF03449 Transcription elongation factor, N-terminal JUNP479_1641 PF13677 Membrane MotB of proton-channel complex MotA/MotB JUNP479_1641 PF00691 OmpA family JUNP479_1641 PF13677 Membrane MotB of proton-channel complex MotA/MotB JUNP479_1641 PF00691 OmpA family JUNP479_1642 PF01618 MotA/TolQ/ExbB proton channel family JUNP479_1643 PF02609 Exonuclease VII small subunit JUNP479_1644 PF00348 Polyprenyl synthetase JUNP479_1645 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JUNP479_1645 PF02780 Transketolase, C-terminal domain JUNP479_1645 PF02779 Transketolase, pyrimidine binding domain JUNP479_1646 PF12911 N-terminal TM domain of oligopeptide transport permease C JUNP479_1646 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_1647 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_1648 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JUNP479_1649 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JUNP479_1649 PF00005 ABC transporter JUNP479_1650 PF04608 Phosphatidylglycerophosphatase A JUNP479_1651 PF00586 AIR synthase related protein, N-terminal domain JUNP479_1651 PF02769 AIR synthase related protein, C-terminal domain JUNP479_1652 PF01029 NusB family JUNP479_1653 PF00885 6,7-dimethyl-8-ribityllumazine synthase JUNP479_1654 PF00925 GTP cyclohydrolase II JUNP479_1654 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JUNP479_1655 PF00677 Lumazine binding domain JUNP479_1656 PF01872 RibD C-terminal domain JUNP479_1656 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JUNP479_1657 PF03477 ATP cone domain JUNP479_1659 PF00464 Serine hydroxymethyltransferase JUNP479_1662 PF02613 Nitrate reductase delta subunit JUNP479_1665 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_1665 PF03707 Bacterial signalling protein N terminal repeat JUNP479_1665 PF00563 EAL domain JUNP479_1667 PF00501 AMP-binding enzyme JUNP479_1667 PF16177 Acetyl-coenzyme A synthetase N-terminus JUNP479_1667 PF13193 AMP-binding enzyme C-terminal domain JUNP479_1668 PF01220 Dehydroquinase class II JUNP479_1669 PF00364 Biotin-requiring enzyme JUNP479_1670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JUNP479_1670 PF00289 Biotin carboxylase, N-terminal domain JUNP479_1670 PF02785 Biotin carboxylase C-terminal domain JUNP479_1671 PF06196 Protein of unknown function (DUF997) JUNP479_1672 PF00474 Sodium:solute symporter family JUNP479_1673 PF02378 Phosphotransferase system, EIIC JUNP479_1673 PF00367 phosphotransferase system, EIIB JUNP479_1673 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JUNP479_1674 PF03466 LysR substrate binding domain JUNP479_1674 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_1675 PF00107 Zinc-binding dehydrogenase JUNP479_1675 PF08240 Alcohol dehydrogenase GroES-like domain JUNP479_1677 PF00132 Bacterial transferase hexapeptide (six repeats) JUNP479_1677 PF12464 Maltose acetyltransferase JUNP479_1678 PF00881 Nitroreductase family JUNP479_1679 PF07992 Pyridine nucleotide-disulphide oxidoreductase JUNP479_1679 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JUNP479_1680 PF01343 Peptidase family S49 JUNP479_1681 PF17969 L,D-transpeptidase C-terminal domain JUNP479_1681 PF03734 L,D-transpeptidase catalytic domain JUNP479_1682 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_1683 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_1683 PF12911 N-terminal TM domain of oligopeptide transport permease C JUNP479_1684 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JUNP479_1684 PF00005 ABC transporter JUNP479_1685 PF00005 ABC transporter JUNP479_1685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JUNP479_1687 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JUNP479_1687 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JUNP479_1687 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JUNP479_1688 PF01370 NAD dependent epimerase/dehydratase family JUNP479_1689 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) JUNP479_1691 PF01464 Transglycosylase SLT domain JUNP479_1694 PF00005 ABC transporter JUNP479_1694 PF12848 ABC transporter JUNP479_1696 PF00860 Permease family JUNP479_1697 PF00749 tRNA synthetases class I (E and Q), catalytic domain JUNP479_1698 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_1698 PF00672 HAMP domain JUNP479_1700 PF00313 'Cold-shock' DNA-binding domain JUNP479_1709 PF00929 Exonuclease JUNP479_1710 PF03193 RsgA GTPase JUNP479_1711 PF02666 Phosphatidylserine decarboxylase JUNP479_1712 PF09905 DNA-binding protein VF530 JUNP479_1715 PF00171 Aldehyde dehydrogenase family JUNP479_1716 PF00696 Amino acid kinase family JUNP479_1716 PF01472 PUA domain JUNP479_1718 PF07417 Sigma factor-binding transcriptional regulator Crl JUNP479_1719 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) JUNP479_1720 PF00156 Phosphoribosyl transferase domain JUNP479_1721 PF01546 Peptidase family M20/M25/M40 JUNP479_1721 PF07687 Peptidase dimerisation domain JUNP479_1722 PF00226 DnaJ domain JUNP479_1722 PF05099 Tellurite resistance protein TerB JUNP479_1723 PF00483 Nucleotidyl transferase JUNP479_1724 PF01636 Phosphotransferase enzyme family JUNP479_1725 PF04453 LPS transport system D JUNP479_1725 PF03968 OstA-like protein JUNP479_1726 PF09312 SurA N-terminal domain JUNP479_1726 PF00639 PPIC-type PPIASE domain JUNP479_1727 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JUNP479_1728 PF00398 Ribosomal RNA adenine dimethylase JUNP479_1729 PF04379 ApaG domain JUNP479_1730 PF00149 Calcineurin-like phosphoesterase JUNP479_1732 PF00296 Luciferase-like monooxygenase JUNP479_1733 PF07670 Nucleoside recognition JUNP479_1734 PF01926 50S ribosome-binding GTPase JUNP479_1734 PF01018 GTP1/OBG JUNP479_1735 PF01016 Ribosomal L27 protein JUNP479_1736 PF00829 Ribosomal prokaryotic L21 protein JUNP479_1737 PF00348 Polyprenyl synthetase JUNP479_1738 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) JUNP479_1739 PF01145 SPFH domain / Band 7 family JUNP479_1740 PF12221 Bacterial membrane protein N terminal JUNP479_1740 PF01145 SPFH domain / Band 7 family JUNP479_1741 PF16360 GTP-binding GTPase Middle Region JUNP479_1741 PF01926 50S ribosome-binding GTPase JUNP479_1741 PF13167 GTP-binding GTPase N-terminal JUNP479_1742 PF17209 Hfq protein JUNP479_1744 PF01119 DNA mismatch repair protein, C-terminal domain JUNP479_1744 PF08676 MutL C terminal dimerisation domain JUNP479_1745 PF01520 N-acetylmuramoyl-L-alanine amidase JUNP479_1746 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JUNP479_1747 PF01256 Carbohydrate kinase JUNP479_1747 PF03853 YjeF-related protein N-terminus JUNP479_1748 PF08331 Domain of unknown function (DUF1730) JUNP479_1749 PF00480 ROK family JUNP479_1751 PF09383 NIL domain JUNP479_1751 PF00005 ABC transporter JUNP479_1752 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_1753 PF03180 NLPA lipoprotein JUNP479_1754 PF02357 Transcription termination factor nusG JUNP479_1755 PF17200 Single Cache domain 2 JUNP479_1755 PF00672 HAMP domain JUNP479_1755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_1756 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_1756 PF03707 Bacterial signalling protein N terminal repeat JUNP479_1756 PF00563 EAL domain JUNP479_1757 PF00072 Response regulator receiver domain JUNP479_1757 PF09456 RcsC Alpha-Beta-Loop (ABL) JUNP479_1757 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_1757 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_1759 PF13286 Phosphohydrolase-associated domain JUNP479_1759 PF01966 HD domain JUNP479_1760 PF01627 Hpt domain JUNP479_1760 PF18415 Histidine kinase receptor ArcB trans-membrane domain JUNP479_1760 PF00989 PAS fold JUNP479_1760 PF00072 Response regulator receiver domain JUNP479_1760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_1760 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_1764 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JUNP479_1765 PF03466 LysR substrate binding domain JUNP479_1765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_1767 PF01259 SAICAR synthetase JUNP479_1768 PF06804 NlpB/DapX lipoprotein JUNP479_1769 PF00701 Dihydrodipicolinate synthetase family JUNP479_1770 PF01842 ACT domain JUNP479_1771 PF00578 AhpC/TSA family JUNP479_1772 PF03887 YfbU domain JUNP479_1773 PF04217 Protein of unknown function, DUF412 JUNP479_1774 PF00871 Acetokinase family JUNP479_1775 PF01515 Phosphate acetyl/butaryl transferase JUNP479_1775 PF07085 DRTGG domain JUNP479_1777 PF00483 Nucleotidyl transferase JUNP479_1778 PF00854 POT family JUNP479_1779 PF00072 Response regulator receiver domain JUNP479_1785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JUNP479_1786 PF02321 Outer membrane efflux protein JUNP479_1787 PF01207 Dihydrouridine synthase (Dus) JUNP479_1788 PF02954 Bacterial regulatory protein, Fis family JUNP479_1792 PF01546 Peptidase family M20/M25/M40 JUNP479_1793 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_1793 PF03466 LysR substrate binding domain JUNP479_1794 PF01810 LysE type translocator JUNP479_1795 PF10369 Small subunit of acetolactate synthase JUNP479_1796 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JUNP479_1796 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JUNP479_1796 PF00205 Thiamine pyrophosphate enzyme, central domain JUNP479_1799 PF01569 PAP2 superfamily JUNP479_1801 PF08502 LeuA allosteric (dimerisation) domain JUNP479_1801 PF00682 HMGL-like JUNP479_1802 PF00180 Isocitrate/isopropylmalate dehydrogenase JUNP479_1803 PF00330 Aconitase family (aconitate hydratase) JUNP479_1804 PF00694 Aconitase C-terminal domain JUNP479_1808 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_1809 PF00005 ABC transporter JUNP479_1810 PF02562 PhoH-like protein JUNP479_1810 PF13638 PIN domain JUNP479_1812 PF08343 Ribonucleotide reductase N-terminal JUNP479_1812 PF00317 Ribonucleotide reductase, all-alpha domain JUNP479_1812 PF02867 Ribonucleotide reductase, barrel domain JUNP479_1818 PF03707 Bacterial signalling protein N terminal repeat JUNP479_1818 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_1818 PF00563 EAL domain JUNP479_1820 PF00118 TCP-1/cpn60 chaperonin family JUNP479_1821 PF00166 Chaperonin 10 Kd subunit JUNP479_1822 PF01554 MatE JUNP479_1823 PF04186 FxsA cytoplasmic membrane protein JUNP479_1824 PF10415 Fumarase C C-terminus JUNP479_1824 PF00206 Lyase JUNP479_1825 PF03605 Anaerobic c4-dicarboxylate membrane transporter JUNP479_1826 PF00814 Glycoprotease family JUNP479_1827 PF01165 Ribosomal protein S21 JUNP479_1828 PF09424 Yqey-like protein JUNP479_1829 PF10410 DnaB-helicase binding domain of primase JUNP479_1829 PF08278 DNA primase DnaG DnaB-binding JUNP479_1829 PF08275 DNA primase catalytic core, N-terminal domain JUNP479_1829 PF01807 CHC2 zinc finger JUNP479_1830 PF03979 Sigma-70 factor, region 1.1 JUNP479_1830 PF04539 Sigma-70 region 3 JUNP479_1830 PF04546 Sigma-70, non-essential region JUNP479_1830 PF00140 Sigma-70 factor, region 1.2 JUNP479_1830 PF04542 Sigma-70 region 2 JUNP479_1830 PF04545 Sigma-70, region 4 JUNP479_1834 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JUNP479_1834 PF02843 Phosphoribosylglycinamide synthetase, C domain JUNP479_1834 PF02844 Phosphoribosylglycinamide synthetase, N domain JUNP479_1835 PF02142 MGS-like domain JUNP479_1835 PF01808 AICARFT/IMPCHase bienzyme JUNP479_1836 PF13411 MerR HTH family regulatory protein JUNP479_1837 PF03889 Alternative ribosome-rescue factor A JUNP479_1838 PF04055 Radical SAM superfamily JUNP479_1838 PF06969 HemN C-terminal domain JUNP479_1839 PF01725 Ham1 family JUNP479_1841 PF07690 Major Facilitator Superfamily JUNP479_1842 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JUNP479_1842 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JUNP479_1844 PF13302 Acetyltransferase (GNAT) domain JUNP479_1845 PF13302 Acetyltransferase (GNAT) domain JUNP479_1846 PF04151 Bacterial pre-peptidase C-terminal domain JUNP479_1846 PF02868 Thermolysin metallopeptidase, alpha-helical domain JUNP479_1846 PF01447 Thermolysin metallopeptidase, catalytic domain JUNP479_1846 PF03413 Peptidase propeptide and YPEB domain JUNP479_1846 PF07504 Fungalysin/Thermolysin Propeptide Motif JUNP479_1847 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_1847 PF03466 LysR substrate binding domain JUNP479_1848 PF07690 Major Facilitator Superfamily JUNP479_1849 PF00583 Acetyltransferase (GNAT) family JUNP479_1850 PF12804 MobA-like NTP transferase domain JUNP479_1850 PF00132 Bacterial transferase hexapeptide (six repeats) JUNP479_1850 PF14602 Hexapeptide repeat of succinyl-transferase JUNP479_1851 PF16658 Class II release factor RF3, C-terminal domain JUNP479_1851 PF00009 Elongation factor Tu GTP binding domain JUNP479_1851 PF03144 Elongation factor Tu domain 2 JUNP479_1852 PF00072 Response regulator receiver domain JUNP479_1852 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_1853 PF05762 VWA domain containing CoxE-like protein JUNP479_1854 PF12592 Protein of unknown function (DUF3763) JUNP479_1854 PF07728 AAA domain (dynein-related subfamily) JUNP479_1854 PF17868 AAA lid domain JUNP479_1856 PF13673 Acetyltransferase (GNAT) domain JUNP479_1856 PF00583 Acetyltransferase (GNAT) family JUNP479_1857 PF00501 AMP-binding enzyme JUNP479_1858 PF04262 Glutamate-cysteine ligase JUNP479_1859 PF05193 Peptidase M16 inactive domain JUNP479_1859 PF00675 Insulinase (Peptidase family M16) JUNP479_1860 PF09335 SNARE associated Golgi protein JUNP479_1861 PF00550 Phosphopantetheine attachment site JUNP479_1861 PF00698 Acyl transferase domain JUNP479_1861 PF08240 Alcohol dehydrogenase GroES-like domain JUNP479_1861 PF08659 KR domain JUNP479_1861 PF14765 Polyketide synthase dehydratase JUNP479_1865 PF00970 Oxidoreductase FAD-binding domain JUNP479_1865 PF00175 Oxidoreductase NAD-binding domain JUNP479_1866 PF03948 Ribosomal protein L9, C-terminal domain JUNP479_1866 PF01281 Ribosomal protein L9, N-terminal domain JUNP479_1867 PF01084 Ribosomal protein S18 JUNP479_1868 PF01250 Ribosomal protein S6 JUNP479_1869 PF01566 Natural resistance-associated macrophage protein JUNP479_1870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JUNP479_1870 PF01411 tRNA synthetases class II (A) JUNP479_1870 PF02272 DHHA1 domain JUNP479_1872 PF00216 Bacterial DNA-binding protein JUNP479_1873 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ JUNP479_1874 PF07238 PilZ domain JUNP479_1875 PF18073 Rubredoxin metal binding domain JUNP479_1878 PF18429 Domain of unknown function (DUF5609) JUNP479_1880 PF01048 Phosphorylase superfamily JUNP479_1881 PF01676 Metalloenzyme superfamily JUNP479_1882 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JUNP479_1882 PF00591 Glycosyl transferase family, a/b domain JUNP479_1882 PF02885 Glycosyl transferase family, helical bundle domain JUNP479_1883 PF01791 DeoC/LacD family aldolase JUNP479_1885 PF07662 Na+ dependent nucleoside transporter C-terminus JUNP479_1885 PF07670 Nucleoside recognition JUNP479_1885 PF01773 Na+ dependent nucleoside transporter N-terminus JUNP479_1886 PF01026 TatD related DNase JUNP479_1887 PF07963 Prokaryotic N-terminal methylation motif JUNP479_1889 PF02664 S-Ribosylhomocysteinase (LuxS) JUNP479_1891 PF00543 Nitrogen regulatory protein P-II JUNP479_1892 PF02540 NAD synthase JUNP479_1892 PF00795 Carbon-nitrogen hydrolase JUNP479_1893 PF07963 Prokaryotic N-terminal methylation motif JUNP479_1900 PF02401 LytB protein JUNP479_1901 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JUNP479_1902 PF01252 Signal peptidase (SPase) II JUNP479_1903 PF08264 Anticodon-binding domain of tRNA JUNP479_1903 PF00133 tRNA synthetases class I (I, L, M and V) JUNP479_1903 PF06827 Zinc finger found in FPG and IleRS JUNP479_1904 PF01687 Riboflavin kinase JUNP479_1904 PF06574 FAD synthetase JUNP479_1905 PF03023 Lipid II flippase MurJ JUNP479_1906 PF01649 Ribosomal protein S20 JUNP479_1907 PF01022 Bacterial regulatory protein, arsR family JUNP479_1908 PF03466 LysR substrate binding domain JUNP479_1908 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_1910 PF06965 Na+/H+ antiporter 1 JUNP479_1911 PF00303 Thymidylate synthase JUNP479_1912 PF01790 Prolipoprotein diacylglyceryl transferase JUNP479_1913 PF02896 PEP-utilising enzyme, TIM barrel domain JUNP479_1913 PF05524 PEP-utilising enzyme, N-terminal JUNP479_1913 PF01590 GAF domain JUNP479_1913 PF00391 PEP-utilising enzyme, mobile domain JUNP479_1914 PF00293 NUDIX domain JUNP479_1915 PF02976 DNA mismatch repair enzyme MutH JUNP479_1917 PF01245 Ribosomal protein L19 JUNP479_1918 PF01746 tRNA (Guanine-1)-methyltransferase JUNP479_1919 PF01782 RimM N-terminal domain JUNP479_1919 PF05239 PRC-barrel domain JUNP479_1920 PF00886 Ribosomal protein S16 JUNP479_1921 PF02978 Signal peptide binding domain JUNP479_1921 PF02881 SRP54-type protein, helical bundle domain JUNP479_1921 PF00448 SRP54-type protein, GTPase domain JUNP479_1922 PF01578 Cytochrome C assembly protein JUNP479_1923 PF03471 Transporter associated domain JUNP479_1923 PF01595 Cyclin M transmembrane N-terminal domain JUNP479_1923 PF00571 CBS domain JUNP479_1924 PF02082 Transcriptional regulator JUNP479_1925 PF00042 Globin JUNP479_1925 PF00970 Oxidoreductase FAD-binding domain JUNP479_1925 PF00175 Oxidoreductase NAD-binding domain JUNP479_1926 PF08238 Sel1 repeat JUNP479_1927 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JUNP479_1927 PF00056 lactate/malate dehydrogenase, NAD binding domain JUNP479_1928 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_1929 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_1930 PF00497 Bacterial extracellular solute-binding proteins, family 3 JUNP479_1931 PF00005 ABC transporter JUNP479_1932 PF01316 Arginine repressor, DNA binding domain JUNP479_1932 PF02863 Arginine repressor, C-terminal domain JUNP479_1933 PF04261 Dyp-type peroxidase family JUNP479_1934 PF00005 ABC transporter JUNP479_1934 PF08402 TOBE domain JUNP479_1936 PF13416 Bacterial extracellular solute-binding protein JUNP479_1937 PF00543 Nitrogen regulatory protein P-II JUNP479_1938 PF00472 RF-1 domain JUNP479_1939 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JUNP479_1939 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JUNP479_1941 PF03883 Peroxide stress protein YaaA JUNP479_1942 PF00437 Type II/IV secretion system protein JUNP479_1943 PF00437 Type II/IV secretion system protein JUNP479_1945 PF01168 Alanine racemase, N-terminal domain JUNP479_1946 PF03807 NADP oxidoreductase coenzyme F420-dependent JUNP479_1946 PF14748 Pyrroline-5-carboxylate reductase dimerisation JUNP479_1947 PF02325 YGGT family JUNP479_1948 PF02594 Uncharacterised ACR, YggU family COG1872 JUNP479_1950 PF07662 Na+ dependent nucleoside transporter C-terminus JUNP479_1950 PF07670 Nucleoside recognition JUNP479_1950 PF01773 Na+ dependent nucleoside transporter N-terminus JUNP479_1951 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_1951 PF03466 LysR substrate binding domain JUNP479_1952 PF00255 Glutathione peroxidase JUNP479_1954 PF02595 Glycerate kinase family JUNP479_1955 PF02447 GntP family permease JUNP479_1956 PF05651 Putative sugar diacid recognition JUNP479_1956 PF17853 GGDEF-like domain JUNP479_1956 PF13556 PucR C-terminal helix-turn-helix domain JUNP479_1957 PF06062 Uncharacterised protein family (UPF0231) JUNP479_1961 PF03372 Endonuclease/Exonuclease/phosphatase family JUNP479_1963 PF00270 DEAD/DEAH box helicase JUNP479_1963 PF00271 Helicase conserved C-terminal domain JUNP479_1965 PF08534 Redoxin JUNP479_1966 PF00403 Heavy-metal-associated domain JUNP479_1967 PF11852 Domain of unknown function (DUF3372) JUNP479_1967 PF03714 Bacterial pullanase-associated domain JUNP479_1967 PF18494 Pullulanase Ins domain JUNP479_1967 PF17967 Pullulanase N2 domain JUNP479_1967 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JUNP479_1970 PF02583 Metal-sensitive transcriptional repressor JUNP479_1971 PF00155 Aminotransferase class I and II JUNP479_1972 PF03466 LysR substrate binding domain JUNP479_1972 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_1974 PF04055 Radical SAM superfamily JUNP479_1975 PF11230 Protein of unknown function (DUF3029) JUNP479_1982 PF00535 Glycosyl transferase family 2 JUNP479_1983 PF14883 Hypothetical glycosyl hydrolase family 13 JUNP479_1983 PF01522 Polysaccharide deacetylase JUNP479_1986 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_1986 PF00672 HAMP domain JUNP479_1986 PF12729 Four helix bundle sensory module for signal transduction JUNP479_1987 PF18416 N-acetylglucosamine binding protein domain 2 JUNP479_1987 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JUNP479_1988 PF00497 Bacterial extracellular solute-binding proteins, family 3 JUNP479_1989 PF00005 ABC transporter JUNP479_1990 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_1992 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_1993 PF00291 Pyridoxal-phosphate dependent enzyme JUNP479_1994 PF03466 LysR substrate binding domain JUNP479_1994 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_1995 PF12857 TOBE-like domain JUNP479_1995 PF00005 ABC transporter JUNP479_1996 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_1997 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_2000 PF13194 Domain of unknown function (DUF4010) JUNP479_2001 PF14602 Hexapeptide repeat of succinyl-transferase JUNP479_2001 PF12464 Maltose acetyltransferase JUNP479_2004 PF13419 Haloacid dehalogenase-like hydrolase JUNP479_2005 PF00293 NUDIX domain JUNP479_2006 PF00459 Inositol monophosphatase family JUNP479_2007 PF03222 Tryptophan/tyrosine permease family JUNP479_2008 PF01588 Putative tRNA binding domain JUNP479_2009 PF02311 AraC-like ligand binding domain JUNP479_2009 PF12833 Helix-turn-helix domain JUNP479_2010 PF01340 Met Apo-repressor, MetJ JUNP479_2011 PF01053 Cys/Met metabolism PLP-dependent enzyme JUNP479_2012 PF00696 Amino acid kinase family JUNP479_2012 PF00742 Homoserine dehydrogenase JUNP479_2012 PF03447 Homoserine dehydrogenase, NAD binding domain JUNP479_2013 PF01384 Phosphate transporter family JUNP479_2014 PF01865 Protein of unknown function DUF47 JUNP479_2015 PF01928 CYTH domain JUNP479_2016 PF00701 Dihydrodipicolinate synthetase family JUNP479_2017 PF05175 Methyltransferase small domain JUNP479_2017 PF08468 Methyltransferase small domain N-terminal JUNP479_2018 PF00483 Nucleotidyl transferase JUNP479_2019 PF08323 Starch synthase catalytic domain JUNP479_2019 PF00534 Glycosyl transferases group 1 JUNP479_2027 PF03553 Na+/H+ antiporter family JUNP479_2028 PF01521 Iron-sulphur cluster biosynthesis JUNP479_2030 PF00654 Voltage gated chloride channel JUNP479_2031 PF00202 Aminotransferase class-III JUNP479_2036 PF13607 Succinyl-CoA ligase like flavodoxin domain JUNP479_2036 PF13380 CoA binding domain JUNP479_2036 PF00583 Acetyltransferase (GNAT) family JUNP479_2043 PF01381 Helix-turn-helix JUNP479_2043 PF07883 Cupin domain JUNP479_2044 PF03594 Benzoate membrane transport protein JUNP479_2046 PF02219 Methylenetetrahydrofolate reductase JUNP479_2049 PF00672 HAMP domain JUNP479_2049 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_2051 PF03922 OmpW family JUNP479_2052 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_2053 PF17760 UvrA interaction domain JUNP479_2053 PF17755 UvrA DNA-binding domain JUNP479_2053 PF00005 ABC transporter JUNP479_2054 PF00436 Single-strand binding protein family JUNP479_2060 PF13538 UvrD-like helicase C-terminal domain JUNP479_2060 PF14490 Helix-hairpin-helix containing domain JUNP479_2060 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JUNP479_2061 PF00313 'Cold-shock' DNA-binding domain JUNP479_2069 PF00892 EamA-like transporter family JUNP479_2070 PF08019 Phosphoethanolamine transferase EptA/EptB JUNP479_2070 PF00884 Sulfatase JUNP479_2071 PF00884 Sulfatase JUNP479_2071 PF08019 Phosphoethanolamine transferase EptA/EptB JUNP479_2072 PF01219 Prokaryotic diacylglycerol kinase JUNP479_2073 PF09722 Protein of unknown function (DUF2384) JUNP479_2076 PF00816 H-NS histone family JUNP479_2085 PF00313 'Cold-shock' DNA-binding domain JUNP479_2086 PF00860 Permease family JUNP479_2087 PF02733 Dak1 domain JUNP479_2088 PF02734 DAK2 domain JUNP479_2089 PF03610 PTS system fructose IIA component JUNP479_2089 PF00391 PEP-utilising enzyme, mobile domain JUNP479_2089 PF00381 PTS HPr component phosphorylation site JUNP479_2089 PF05524 PEP-utilising enzyme, N-terminal JUNP479_2090 PF00465 Iron-containing alcohol dehydrogenase JUNP479_2091 PF00158 Sigma-54 interaction domain JUNP479_2091 PF00989 PAS fold JUNP479_2091 PF02954 Bacterial regulatory protein, Fis family JUNP479_2092 PF03466 LysR substrate binding domain JUNP479_2092 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_2093 PF04371 Porphyromonas-type peptidyl-arginine deiminase JUNP479_2094 PF00795 Carbon-nitrogen hydrolase JUNP479_2095 PF13416 Bacterial extracellular solute-binding protein JUNP479_2096 PF04371 Porphyromonas-type peptidyl-arginine deiminase JUNP479_2098 PF01594 AI-2E family transporter JUNP479_2099 PF00293 NUDIX domain JUNP479_2101 PF01479 S4 domain JUNP479_2102 PF01430 Hsp33 protein JUNP479_2103 PF01293 Phosphoenolpyruvate carboxykinase JUNP479_2104 PF00392 Bacterial regulatory proteins, gntR family JUNP479_2105 PF01321 Creatinase/Prolidase N-terminal domain JUNP479_2105 PF00557 Metallopeptidase family M24 JUNP479_2106 PF11756 Nitrous oxide-stimulated promoter JUNP479_2108 PF00583 Acetyltransferase (GNAT) family JUNP479_2109 PF05433 Glycine zipper 2TM domain JUNP479_2110 PF00909 Ammonium Transporter Family JUNP479_2111 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_2113 PF06055 Exopolysaccharide synthesis, ExoD JUNP479_2115 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_2117 PF00132 Bacterial transferase hexapeptide (six repeats) JUNP479_2121 PF06968 Biotin and Thiamin Synthesis associated domain JUNP479_2121 PF04055 Radical SAM superfamily JUNP479_2122 PF05690 Thiazole biosynthesis protein ThiG JUNP479_2124 PF00899 ThiF family JUNP479_2125 PF02581 Thiamine monophosphate synthase JUNP479_2126 PF01964 Radical SAM ThiC family JUNP479_2126 PF13667 ThiC-associated domain JUNP479_2127 PF13411 MerR HTH family regulatory protein JUNP479_2130 PF00486 Transcriptional regulatory protein, C terminal JUNP479_2130 PF00072 Response regulator receiver domain JUNP479_2131 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_2132 PF18030 RimK PreATP-grasp domain JUNP479_2132 PF08443 RimK-like ATP-grasp domain JUNP479_2133 PF02607 B12 binding domain JUNP479_2133 PF02310 B12 binding domain JUNP479_2133 PF02965 Vitamin B12 dependent methionine synthase, activation domain JUNP479_2133 PF02574 Homocysteine S-methyltransferase JUNP479_2133 PF00809 Pterin binding enzyme JUNP479_2134 PF00999 Sodium/hydrogen exchanger family JUNP479_2139 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JUNP479_2141 PF07690 Major Facilitator Superfamily JUNP479_2142 PF01914 MarC family integral membrane protein JUNP479_2144 PF01523 Putative modulator of DNA gyrase JUNP479_2145 PF00795 Carbon-nitrogen hydrolase JUNP479_2147 PF13116 Protein of unknown function JUNP479_2147 PF13502 AsmA-like C-terminal region JUNP479_2148 PF10150 Ribonuclease E/G family JUNP479_2148 PF00575 S1 RNA binding domain JUNP479_2149 PF02545 Maf-like protein JUNP479_2150 PF04093 rod shape-determining protein MreD JUNP479_2151 PF04085 rod shape-determining protein MreC JUNP479_2157 PF00114 Pilin (bacterial filament) JUNP479_2157 PF07963 Prokaryotic N-terminal methylation motif JUNP479_2158 PF07963 Prokaryotic N-terminal methylation motif JUNP479_2159 PF07963 Prokaryotic N-terminal methylation motif JUNP479_2161 PF00482 Type II secretion system (T2SS), protein F JUNP479_2162 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JUNP479_2162 PF00437 Type II/IV secretion system protein JUNP479_2165 PF00263 Bacterial type II and III secretion system protein JUNP479_2165 PF03958 Bacterial type II/III secretion system short domain JUNP479_2171 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_2171 PF00563 EAL domain JUNP479_2171 PF17157 Gammaproteobacterial periplasmic sensor domain JUNP479_2173 PF00563 EAL domain JUNP479_2173 PF12792 CSS motif domain associated with EAL JUNP479_2175 PF01699 Sodium/calcium exchanger protein JUNP479_2176 PF00221 Aromatic amino acid lyase JUNP479_2177 PF01175 Urocanase Rossmann-like domain JUNP479_2177 PF17391 Urocanase N-terminal domain JUNP479_2177 PF17392 Urocanase C-terminal domain JUNP479_2178 PF00491 Arginase family JUNP479_2179 PF01979 Amidohydrolase family JUNP479_2180 PF00392 Bacterial regulatory proteins, gntR family JUNP479_2180 PF07702 UTRA domain JUNP479_2181 PF00484 Carbonic anhydrase JUNP479_2182 PF00140 Sigma-70 factor, region 1.2 JUNP479_2182 PF04542 Sigma-70 region 2 JUNP479_2182 PF04545 Sigma-70, region 4 JUNP479_2183 PF18075 FtsX extracellular domain JUNP479_2184 PF00005 ABC transporter JUNP479_2185 PF02881 SRP54-type protein, helical bundle domain JUNP479_2185 PF00448 SRP54-type protein, GTPase domain JUNP479_2190 PF02254 TrkA-N domain JUNP479_2190 PF00999 Sodium/hydrogen exchanger family JUNP479_2191 PF02525 Flavodoxin-like fold JUNP479_2192 PF03466 LysR substrate binding domain JUNP479_2192 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_2193 PF00106 short chain dehydrogenase JUNP479_2196 PF00326 Prolyl oligopeptidase family JUNP479_2196 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JUNP479_2199 PF13091 PLD-like domain JUNP479_2201 PF00497 Bacterial extracellular solute-binding proteins, family 3 JUNP479_2201 PF01464 Transglycosylase SLT domain JUNP479_2203 PF02416 mttA/Hcf106 family JUNP479_2204 PF03466 LysR substrate binding domain JUNP479_2204 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_2205 PF01914 MarC family integral membrane protein JUNP479_2206 PF10678 Protein of unknown function (DUF2492) JUNP479_2207 PF00375 Sodium:dicarboxylate symporter family JUNP479_2209 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_2209 PF03466 LysR substrate binding domain JUNP479_2210 PF13533 Biotin-lipoyl like JUNP479_2211 PF07690 Major Facilitator Superfamily JUNP479_2212 PF07947 YhhN family JUNP479_2215 PF00440 Bacterial regulatory proteins, tetR family JUNP479_2223 PF03144 Elongation factor Tu domain 2 JUNP479_2223 PF03143 Elongation factor Tu C-terminal domain JUNP479_2223 PF00009 Elongation factor Tu GTP binding domain JUNP479_2224 PF03144 Elongation factor Tu domain 2 JUNP479_2224 PF00009 Elongation factor Tu GTP binding domain JUNP479_2224 PF03764 Elongation factor G, domain IV JUNP479_2224 PF14492 Elongation Factor G, domain II JUNP479_2224 PF00679 Elongation factor G C-terminus JUNP479_2225 PF00177 Ribosomal protein S7p/S5e JUNP479_2226 PF00164 Ribosomal protein S12/S23 JUNP479_2227 PF04077 DsrH like protein JUNP479_2228 PF02635 DsrE/DsrF-like family JUNP479_2229 PF02635 DsrE/DsrF-like family JUNP479_2230 PF01042 Endoribonuclease L-PSP JUNP479_2231 PF08348 YheO-like PAS domain JUNP479_2231 PF13309 HTH domain JUNP479_2232 PF04997 RNA polymerase Rpb1, domain 1 JUNP479_2232 PF00623 RNA polymerase Rpb1, domain 2 JUNP479_2232 PF04998 RNA polymerase Rpb1, domain 5 JUNP479_2232 PF05000 RNA polymerase Rpb1, domain 4 JUNP479_2232 PF04983 RNA polymerase Rpb1, domain 3 JUNP479_2233 PF04560 RNA polymerase Rpb2, domain 7 JUNP479_2233 PF04563 RNA polymerase beta subunit JUNP479_2233 PF04561 RNA polymerase Rpb2, domain 2 JUNP479_2233 PF04565 RNA polymerase Rpb2, domain 3 JUNP479_2233 PF10385 RNA polymerase beta subunit external 1 domain JUNP479_2233 PF00562 RNA polymerase Rpb2, domain 6 JUNP479_2234 PF00542 Ribosomal protein L7/L12 C-terminal domain JUNP479_2234 PF16320 Ribosomal protein L7/L12 dimerisation domain JUNP479_2235 PF00466 Ribosomal protein L10 JUNP479_2236 PF00687 Ribosomal protein L1p/L10e family JUNP479_2237 PF03946 Ribosomal protein L11, N-terminal domain JUNP479_2237 PF00298 Ribosomal protein L11, RNA binding domain JUNP479_2238 PF02357 Transcription termination factor nusG JUNP479_2238 PF00467 KOW motif JUNP479_2239 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JUNP479_2241 PF00009 Elongation factor Tu GTP binding domain JUNP479_2241 PF03144 Elongation factor Tu domain 2 JUNP479_2241 PF03143 Elongation factor Tu C-terminal domain JUNP479_2244 PF00485 Phosphoribulokinase / Uridine kinase family JUNP479_2245 PF08279 HTH domain JUNP479_2245 PF03099 Biotin/lipoate A/B protein ligase family JUNP479_2245 PF02237 Biotin protein ligase C terminal domain JUNP479_2246 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JUNP479_2246 PF01565 FAD binding domain JUNP479_2247 PF02080 TrkA-C domain JUNP479_2247 PF02254 TrkA-N domain JUNP479_2248 PF02386 Cation transport protein JUNP479_2249 PF01131 DNA topoisomerase JUNP479_2249 PF01751 Toprim domain JUNP479_2251 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_2251 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_2251 PF00497 Bacterial extracellular solute-binding proteins, family 3 JUNP479_2252 PF03264 NapC/NirT cytochrome c family, N-terminal region JUNP479_2253 PF00384 Molybdopterin oxidoreductase JUNP479_2253 PF18364 Molybdopterin oxidoreductase N-terminal domain JUNP479_2253 PF01568 Molydopterin dinucleotide binding domain JUNP479_2255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_2256 PF00072 Response regulator receiver domain JUNP479_2256 PF00486 Transcriptional regulatory protein, C terminal JUNP479_2259 PF01794 Ferric reductase like transmembrane component JUNP479_2260 PF00174 Oxidoreductase molybdopterin binding domain JUNP479_2261 PF06496 Protein of unknown function (DUF1097) JUNP479_2262 PF00072 Response regulator receiver domain JUNP479_2262 PF00158 Sigma-54 interaction domain JUNP479_2264 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_2264 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_2267 PF10063 Uncharacterized integral membrane protein (DUF2301) JUNP479_2269 PF01037 Lrp/AsnC ligand binding domain JUNP479_2270 PF03590 Aspartate-ammonia ligase JUNP479_2272 PF00004 ATPase family associated with various cellular activities (AAA) JUNP479_2272 PF07724 AAA domain (Cdc48 subfamily) JUNP479_2272 PF10431 C-terminal, D2-small domain, of ClpB protein JUNP479_2272 PF02861 Clp amino terminal domain, pathogenicity island component JUNP479_2272 PF17871 AAA lid domain JUNP479_2273 PF02578 Multi-copper polyphenol oxidoreductase laccase JUNP479_2274 PF01479 S4 domain JUNP479_2274 PF00849 RNA pseudouridylate synthase JUNP479_2275 PF13525 Outer membrane lipoprotein JUNP479_2278 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JUNP479_2278 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JUNP479_2278 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JUNP479_2279 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JUNP479_2280 PF00535 Glycosyl transferase family 2 JUNP479_2281 PF01370 NAD dependent epimerase/dehydratase family JUNP479_2281 PF00551 Formyl transferase JUNP479_2281 PF02911 Formyl transferase, C-terminal domain JUNP479_2282 PF01522 Polysaccharide deacetylase JUNP479_2283 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JUNP479_2284 PF00892 EamA-like transporter family JUNP479_2285 PF00893 Small Multidrug Resistance protein JUNP479_2286 PF07992 Pyridine nucleotide-disulphide oxidoreductase JUNP479_2286 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JUNP479_2287 PF00375 Sodium:dicarboxylate symporter family JUNP479_2288 PF03313 Serine dehydratase alpha chain JUNP479_2290 PF00589 Phage integrase family JUNP479_2290 PF02899 Phage integrase, N-terminal SAM-like domain JUNP479_2306 PF00929 Exonuclease JUNP479_2322 PF01258 Prokaryotic dksA/traR C4-type zinc finger JUNP479_2333 PF02413 Caudovirales tail fibre assembly protein, lambda gpK JUNP479_2337 PF02233 NAD(P) transhydrogenase beta subunit JUNP479_2338 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JUNP479_2338 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JUNP479_2338 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JUNP479_2339 PF00465 Iron-containing alcohol dehydrogenase JUNP479_2340 PF12833 Helix-turn-helix domain JUNP479_2340 PF06719 AraC-type transcriptional regulator N-terminus JUNP479_2341 PF08212 Lipocalin-like domain JUNP479_2344 PF01470 Pyroglutamyl peptidase JUNP479_2346 PF00672 HAMP domain JUNP479_2346 PF02743 Cache domain JUNP479_2346 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_2348 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_2348 PF03466 LysR substrate binding domain JUNP479_2349 PF02666 Phosphatidylserine decarboxylase JUNP479_2352 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JUNP479_2352 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JUNP479_2353 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain JUNP479_2353 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain JUNP479_2354 PF01316 Arginine repressor, DNA binding domain JUNP479_2354 PF02863 Arginine repressor, C-terminal domain JUNP479_2355 PF03606 C4-dicarboxylate anaerobic carrier JUNP479_2356 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JUNP479_2356 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JUNP479_2357 PF00696 Amino acid kinase family JUNP479_2363 PF04055 Radical SAM superfamily JUNP479_2363 PF06969 HemN C-terminal domain JUNP479_2364 PF10675 Protein of unknown function (DUF2489) JUNP479_2365 PF04220 Der GTPase activator (YihI) JUNP479_2367 PF00034 Cytochrome c JUNP479_2368 PF01926 50S ribosome-binding GTPase JUNP479_2369 PF07369 Protein of unknown function (DUF1488) JUNP479_2370 PF08501 Shikimate dehydrogenase substrate binding domain JUNP479_2370 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JUNP479_2370 PF01488 Shikimate / quinate 5-dehydrogenase JUNP479_2371 PF01218 Coproporphyrinogen III oxidase JUNP479_2372 PF01300 Telomere recombination JUNP479_2373 PF00731 AIR carboxylase JUNP479_2374 PF01396 Topoisomerase DNA binding C4 zinc finger JUNP479_2375 PF04361 Protein of unknown function (DUF494) JUNP479_2376 PF02481 DNA recombination-mediator protein A JUNP479_2376 PF17782 DprA winged helix domain JUNP479_2377 PF01476 LysM domain JUNP479_2378 PF01327 Polypeptide deformylase JUNP479_2379 PF00551 Formyl transferase JUNP479_2379 PF02911 Formyl transferase, C-terminal domain JUNP479_2380 PF01189 16S rRNA methyltransferase RsmB/F JUNP479_2380 PF01029 NusB family JUNP479_2381 PF02254 TrkA-N domain JUNP479_2381 PF02080 TrkA-C domain JUNP479_2382 PF02386 Cation transport protein JUNP479_2383 PF00009 Elongation factor Tu GTP binding domain JUNP479_2383 PF00679 Elongation factor G C-terminus JUNP479_2383 PF03144 Elongation factor Tu domain 2 JUNP479_2385 PF03951 Glutamine synthetase, beta-Grasp domain JUNP479_2385 PF00120 Glutamine synthetase, catalytic domain JUNP479_2387 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_2387 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_2387 PF00989 PAS fold JUNP479_2388 PF02954 Bacterial regulatory protein, Fis family JUNP479_2388 PF00072 Response regulator receiver domain JUNP479_2388 PF00158 Sigma-54 interaction domain JUNP479_2389 PF00962 Adenosine/AMP deaminase JUNP479_2390 PF02646 RmuC family JUNP479_2393 PF02082 Transcriptional regulator JUNP479_2394 PF00294 pfkB family carbohydrate kinase JUNP479_2395 PF03466 LysR substrate binding domain JUNP479_2395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_2398 PF00171 Aldehyde dehydrogenase family JUNP479_2399 PF00202 Aminotransferase class-III JUNP479_2400 PF07883 Cupin domain JUNP479_2400 PF01381 Helix-turn-helix JUNP479_2401 PF00171 Aldehyde dehydrogenase family JUNP479_2403 PF00892 EamA-like transporter family JUNP479_2404 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_2405 PF04143 Sulphur transport JUNP479_2406 PF00689 Cation transporting ATPase, C-terminus JUNP479_2406 PF00690 Cation transporter/ATPase, N-terminus JUNP479_2408 PF01389 OmpA-like transmembrane domain JUNP479_2408 PF00691 OmpA family JUNP479_2409 PF00440 Bacterial regulatory proteins, tetR family JUNP479_2411 PF00585 C-terminal regulatory domain of Threonine dehydratase JUNP479_2411 PF00291 Pyridoxal-phosphate dependent enzyme JUNP479_2412 PF00920 Dehydratase family JUNP479_2413 PF01063 Amino-transferase class IV JUNP479_2415 PF00205 Thiamine pyrophosphate enzyme, central domain JUNP479_2415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JUNP479_2415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JUNP479_2416 PF01078 Magnesium chelatase, subunit ChlI JUNP479_2416 PF13335 Magnesium chelatase, subunit ChlI C-terminal JUNP479_2417 PF01553 Acyltransferase JUNP479_2418 PF01553 Acyltransferase JUNP479_2419 PF04463 Protein of unknown function (DUF523) JUNP479_2421 PF00857 Isochorismatase family JUNP479_2422 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JUNP479_2422 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JUNP479_2423 PF01323 DSBA-like thioredoxin domain JUNP479_2424 PF01636 Phosphotransferase enzyme family JUNP479_2425 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase JUNP479_2425 PF13746 4Fe-4S dicluster domain JUNP479_2425 PF12801 4Fe-4S binding domain JUNP479_2426 PF06288 Protein of unknown function (DUF1040) JUNP479_2427 PF01590 GAF domain JUNP479_2427 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_2427 PF00360 Phytochrome region JUNP479_2427 PF00563 EAL domain JUNP479_2428 PF13411 MerR HTH family regulatory protein JUNP479_2429 PF00403 Heavy-metal-associated domain JUNP479_2430 PF00156 Phosphoribosyl transferase domain JUNP479_2431 PF03725 3' exoribonuclease family, domain 2 JUNP479_2431 PF01138 3' exoribonuclease family, domain 1 JUNP479_2432 PF03755 YicC-like family, N-terminal region JUNP479_2432 PF08340 Domain of unknown function (DUF1732) JUNP479_2433 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_2433 PF03466 LysR substrate binding domain JUNP479_2434 PF08240 Alcohol dehydrogenase GroES-like domain JUNP479_2434 PF00107 Zinc-binding dehydrogenase JUNP479_2435 PF00756 Putative esterase JUNP479_2436 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_2436 PF03466 LysR substrate binding domain JUNP479_2444 PF03781 Sulfatase-modifying factor enzyme 1 JUNP479_2444 PF12867 DinB superfamily JUNP479_2445 PF13593 SBF-like CPA transporter family (DUF4137) JUNP479_2446 PF13520 Amino acid permease JUNP479_2447 PF01588 Putative tRNA binding domain JUNP479_2448 PF13520 Amino acid permease JUNP479_2449 PF04074 YhcH/YjgK/YiaL JUNP479_2450 PF02837 Glycosyl hydrolases family 2, sugar binding domain JUNP479_2450 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JUNP479_2450 PF00703 Glycosyl hydrolases family 2 JUNP479_2450 PF02929 Beta galactosidase small chain JUNP479_2450 PF16353 Domain of unknown function(DUF4981) JUNP479_2451 PF00356 Bacterial regulatory proteins, lacI family JUNP479_2458 PF00132 Bacterial transferase hexapeptide (six repeats) JUNP479_2459 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JUNP479_2459 PF00476 DNA polymerase family A JUNP479_2459 PF01367 5'-3' exonuclease, C-terminal SAM fold JUNP479_2459 PF01612 3'-5' exonuclease JUNP479_2461 PF06005 Cell division protein ZapB JUNP479_2463 PF06426 Serine acetyltransferase, N-terminal JUNP479_2463 PF00132 Bacterial transferase hexapeptide (six repeats) JUNP479_2464 PF16916 Dimerisation domain of Zinc Transporter JUNP479_2464 PF01545 Cation efflux family JUNP479_2465 PF00486 Transcriptional regulatory protein, C terminal JUNP479_2465 PF00072 Response regulator receiver domain JUNP479_2466 PF16527 Two-component sensor protein CpxA, periplasmic domain JUNP479_2466 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_2466 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_2466 PF00672 HAMP domain JUNP479_2467 PF00588 SpoU rRNA Methylase family JUNP479_2468 PF01554 MatE JUNP479_2469 PF02630 SCO1/SenC JUNP479_2471 PF00717 Peptidase S24-like JUNP479_2471 PF01726 LexA DNA binding domain JUNP479_2472 PF01553 Acyltransferase JUNP479_2473 PF01040 UbiA prenyltransferase family JUNP479_2474 PF04345 Chorismate lyase JUNP479_2475 PF03748 Flagellar basal body-associated protein FliL JUNP479_2479 PF08240 Alcohol dehydrogenase GroES-like domain JUNP479_2479 PF00107 Zinc-binding dehydrogenase JUNP479_2480 PF00356 Bacterial regulatory proteins, lacI family JUNP479_2480 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JUNP479_2481 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JUNP479_2483 PF03611 PTS system sugar-specific permease component JUNP479_2484 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JUNP479_2485 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JUNP479_2486 PF00535 Glycosyl transferase family 2 JUNP479_2487 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JUNP479_2488 PF01467 Cytidylyltransferase-like JUNP479_2489 PF04393 Protein of unknown function (DUF535) JUNP479_2490 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JUNP479_2490 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JUNP479_2490 PF06827 Zinc finger found in FPG and IleRS JUNP479_2492 PF00471 Ribosomal protein L33 JUNP479_2493 PF00830 Ribosomal L28 family JUNP479_2494 PF04002 RadC-like JAB domain JUNP479_2495 PF04127 DNA / pantothenate metabolism flavoprotein JUNP479_2495 PF02441 Flavoprotein JUNP479_2496 PF00692 dUTPase JUNP479_2497 PF00440 Bacterial regulatory proteins, tetR family JUNP479_2498 PF05552 Conserved TM helix JUNP479_2498 PF00924 Mechanosensitive ion channel JUNP479_2499 PF00342 Phosphoglucose isomerase JUNP479_2500 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JUNP479_2500 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JUNP479_2501 PF03466 LysR substrate binding domain JUNP479_2501 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_2504 PF13607 Succinyl-CoA ligase like flavodoxin domain JUNP479_2504 PF00583 Acetyltransferase (GNAT) family JUNP479_2504 PF13380 CoA binding domain JUNP479_2510 PF12724 Flavodoxin domain JUNP479_2511 PF02386 Cation transport protein JUNP479_2512 PF09186 Domain of unknown function (DUF1949) JUNP479_2512 PF01205 Uncharacterized protein family UPF0029 JUNP479_2513 PF00557 Metallopeptidase family M24 JUNP479_2514 PF00501 AMP-binding enzyme JUNP479_2514 PF13193 AMP-binding enzyme C-terminal domain JUNP479_2515 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JUNP479_2515 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JUNP479_2515 PF00378 Enoyl-CoA hydratase/isomerase JUNP479_2516 PF02803 Thiolase, C-terminal domain JUNP479_2516 PF00108 Thiolase, N-terminal domain JUNP479_2517 PF00486 Transcriptional regulatory protein, C terminal JUNP479_2517 PF00072 Response regulator receiver domain JUNP479_2518 PF00672 HAMP domain JUNP479_2518 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_2518 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_2519 PF01547 Bacterial extracellular solute-binding protein JUNP479_2521 PF01206 Sulfurtransferase TusA JUNP479_2522 PF01042 Endoribonuclease L-PSP JUNP479_2523 PF00691 OmpA family JUNP479_2523 PF13488 Glycine zipper JUNP479_2524 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_2524 PF17200 Single Cache domain 2 JUNP479_2524 PF00672 HAMP domain JUNP479_2525 PF03352 Methyladenine glycosylase JUNP479_2526 PF02091 Glycyl-tRNA synthetase alpha subunit JUNP479_2527 PF02092 Glycyl-tRNA synthetase beta subunit JUNP479_2527 PF05746 DALR anticodon binding domain JUNP479_2530 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_2530 PF01590 GAF domain JUNP479_2530 PF00563 EAL domain JUNP479_2530 PF00360 Phytochrome region JUNP479_2531 PF02743 Cache domain JUNP479_2531 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_2531 PF00672 HAMP domain JUNP479_2533 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_2533 PF00672 HAMP domain JUNP479_2533 PF17200 Single Cache domain 2 JUNP479_2534 PF00356 Bacterial regulatory proteins, lacI family JUNP479_2536 PF13458 Periplasmic binding protein JUNP479_2537 PF02653 Branched-chain amino acid transport system / permease component JUNP479_2538 PF02653 Branched-chain amino acid transport system / permease component JUNP479_2538 PF11862 Domain of unknown function (DUF3382) JUNP479_2539 PF00005 ABC transporter JUNP479_2539 PF12399 Branched-chain amino acid ATP-binding cassette transporter JUNP479_2540 PF00005 ABC transporter JUNP479_2541 PF00581 Rhodanese-like domain JUNP479_2542 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease JUNP479_2542 PF01694 Rhomboid family JUNP479_2543 PF04380 Membrane fusogenic activity JUNP479_2544 PF08448 PAS fold JUNP479_2544 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_2544 PF00563 EAL domain JUNP479_2545 PF00175 Oxidoreductase NAD-binding domain JUNP479_2546 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JUNP479_2548 PF07498 Rho termination factor, N-terminal domain JUNP479_2548 PF07497 Rho termination factor, RNA-binding domain JUNP479_2548 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JUNP479_2549 PF00085 Thioredoxin JUNP479_2550 PF00271 Helicase conserved C-terminal domain JUNP479_2550 PF00270 DEAD/DEAH box helicase JUNP479_2551 PF02541 Ppx/GppA phosphatase family JUNP479_2553 PF04445 Putative SAM-dependent methyltransferase JUNP479_2554 PF00497 Bacterial extracellular solute-binding proteins, family 3 JUNP479_2555 PF03707 Bacterial signalling protein N terminal repeat JUNP479_2555 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_2555 PF00563 EAL domain JUNP479_2556 PF01432 Peptidase family M3 JUNP479_2557 PF00704 Glycosyl hydrolases family 18 JUNP479_2558 PF00490 Delta-aminolevulinic acid dehydratase JUNP479_2559 PF01026 TatD related DNase JUNP479_2560 PF00902 Sec-independent protein translocase protein (TatC) JUNP479_2561 PF02416 mttA/Hcf106 family JUNP479_2562 PF02416 mttA/Hcf106 family JUNP479_2563 PF03109 ABC1 family JUNP479_2564 PF02036 SCP-2 sterol transfer family JUNP479_2565 PF01209 ubiE/COQ5 methyltransferase family JUNP479_2566 PF07969 Amidohydrolase family JUNP479_2567 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JUNP479_2575 PF03544 Gram-negative bacterial TonB protein C-terminal JUNP479_2576 PF02472 Biopolymer transport protein ExbD/TolR JUNP479_2577 PF01618 MotA/TolQ/ExbB proton channel family JUNP479_2578 PF01618 MotA/TolQ/ExbB proton channel family JUNP479_2580 PF03472 Autoinducer binding domain JUNP479_2580 PF00196 Bacterial regulatory proteins, luxR family JUNP479_2581 PF01380 SIS domain JUNP479_2582 PF08220 DeoR-like helix-turn-helix domain JUNP479_2582 PF00455 DeoR C terminal sensor domain JUNP479_2583 PF00072 Response regulator receiver domain JUNP479_2583 PF00486 Transcriptional regulatory protein, C terminal JUNP479_2584 PF00672 HAMP domain JUNP479_2584 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_2584 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_2585 PF00905 Penicillin binding protein transpeptidase domain JUNP479_2587 PF06123 Inner membrane protein CreD JUNP479_2590 PF13439 Glycosyltransferase Family 4 JUNP479_2590 PF00534 Glycosyl transferases group 1 JUNP479_2596 PF02706 Chain length determinant protein JUNP479_2596 PF13807 G-rich domain on putative tyrosine kinase JUNP479_2596 PF13614 AAA domain JUNP479_2599 PF02397 Bacterial sugar transferase JUNP479_2600 PF14602 Hexapeptide repeat of succinyl-transferase JUNP479_2600 PF00132 Bacterial transferase hexapeptide (six repeats) JUNP479_2600 PF12804 MobA-like NTP transferase domain JUNP479_2601 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JUNP479_2601 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JUNP479_2602 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JUNP479_2602 PF02874 ATP synthase alpha/beta family, beta-barrel domain JUNP479_2603 PF00231 ATP synthase JUNP479_2604 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JUNP479_2604 PF00306 ATP synthase alpha/beta chain, C terminal domain JUNP479_2604 PF02874 ATP synthase alpha/beta family, beta-barrel domain JUNP479_2605 PF00213 ATP synthase delta (OSCP) subunit JUNP479_2606 PF00430 ATP synthase B/B' CF(0) JUNP479_2607 PF00137 ATP synthase subunit C JUNP479_2608 PF00119 ATP synthase A chain JUNP479_2610 PF02195 ParB-like nuclease domain JUNP479_2610 PF17762 HTH domain found in ParB protein JUNP479_2611 PF13614 AAA domain JUNP479_2612 PF02527 rRNA small subunit methyltransferase G JUNP479_2613 PF13932 GidA associated domain JUNP479_2613 PF01134 Glucose inhibited division protein A JUNP479_2614 PF00258 Flavodoxin JUNP479_2615 PF07715 TonB-dependent Receptor Plug Domain JUNP479_2615 PF00593 TonB dependent receptor JUNP479_2616 PF00005 ABC transporter JUNP479_2617 PF00005 ABC transporter JUNP479_2618 PF01497 Periplasmic binding protein JUNP479_2619 PF01032 FecCD transport family JUNP479_2620 PF10396 GTP-binding protein TrmE N-terminus JUNP479_2620 PF12631 MnmE helical domain JUNP479_2620 PF01926 50S ribosome-binding GTPase JUNP479_2621 PF02096 60Kd inner membrane protein JUNP479_2621 PF14849 YidC periplasmic domain JUNP479_2622 PF00825 Ribonuclease P JUNP479_2623 PF00468 Ribosomal protein L34 JUNP479_2624 PF00005 ABC transporter JUNP479_2625 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_2626 PF00497 Bacterial extracellular solute-binding proteins, family 3 JUNP479_2627 PF00308 Bacterial dnaA protein JUNP479_2627 PF11638 DnaA N-terminal domain JUNP479_2627 PF08299 Bacterial dnaA protein helix-turn-helix JUNP479_2628 PF02768 DNA polymerase III beta subunit, C-terminal domain JUNP479_2628 PF02767 DNA polymerase III beta subunit, central domain JUNP479_2628 PF00712 DNA polymerase III beta subunit, N-terminal domain JUNP479_2629 PF02463 RecF/RecN/SMC N terminal domain JUNP479_2630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_2630 PF18053 DNA gyrase B subunit insert domain JUNP479_2630 PF00986 DNA gyrase B subunit, carboxyl terminus JUNP479_2630 PF00204 DNA gyrase B JUNP479_2630 PF01751 Toprim domain JUNP479_2633 PF13280 WYL domain JUNP479_2633 PF08279 HTH domain JUNP479_2634 PF01965 DJ-1/PfpI family JUNP479_2634 PF12833 Helix-turn-helix domain JUNP479_2635 PF12706 Beta-lactamase superfamily domain JUNP479_2636 PF00011 Hsp20/alpha crystallin family JUNP479_2637 PF00011 Hsp20/alpha crystallin family JUNP479_2638 PF00155 Aminotransferase class I and II JUNP479_2640 PF07690 Major Facilitator Superfamily JUNP479_2641 PF00486 Transcriptional regulatory protein, C terminal JUNP479_2641 PF00072 Response regulator receiver domain JUNP479_2642 PF13493 Domain of unknown function (DUF4118) JUNP479_2642 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_2642 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_2642 PF02702 Osmosensitive K+ channel His kinase sensor domain JUNP479_2642 PF13492 GAF domain JUNP479_2643 PF02669 K+-transporting ATPase, c chain JUNP479_2645 PF03814 Potassium-transporting ATPase A subunit JUNP479_2647 PF07992 Pyridine nucleotide-disulphide oxidoreductase JUNP479_2647 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JUNP479_2648 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_2648 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_2648 PF00497 Bacterial extracellular solute-binding proteins, family 3 JUNP479_2649 PF00873 AcrB/AcrD/AcrF family JUNP479_2650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JUNP479_2651 PF00440 Bacterial regulatory proteins, tetR family JUNP479_2659 PF12146 Serine aminopeptidase, S33 JUNP479_2660 PF00132 Bacterial transferase hexapeptide (six repeats) JUNP479_2661 PF00588 SpoU rRNA Methylase family JUNP479_2661 PF12105 SpoU, rRNA methylase, C-terminal JUNP479_2662 PF02824 TGS domain JUNP479_2662 PF04607 Region found in RelA / SpoT proteins JUNP479_2662 PF13291 ACT domain JUNP479_2663 PF01192 RNA polymerase Rpb6 JUNP479_2664 PF00625 Guanylate kinase JUNP479_2665 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JUNP479_2668 PF00892 EamA-like transporter family JUNP479_2672 PF03466 LysR substrate binding domain JUNP479_2672 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_2673 PF00579 tRNA synthetases class I (W and Y) JUNP479_2674 PF00582 Universal stress protein family JUNP479_2675 PF07055 Enoyl reductase FAD binding domain JUNP479_2675 PF12241 Trans-2-enoyl-CoA reductase catalytic region JUNP479_2675 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JUNP479_2676 PF00210 Ferritin-like domain JUNP479_2678 PF07694 5TMR of 5TMR-LYT JUNP479_2678 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_2678 PF06580 Histidine kinase JUNP479_2679 PF00072 Response regulator receiver domain JUNP479_2679 PF04397 LytTr DNA-binding domain JUNP479_2680 PF07690 Major Facilitator Superfamily JUNP479_2681 PF02222 ATP-grasp domain JUNP479_2681 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JUNP479_2682 PF00731 AIR carboxylase JUNP479_2685 PF03466 LysR substrate binding domain JUNP479_2685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_2686 PF00593 TonB dependent receptor JUNP479_2686 PF07715 TonB-dependent Receptor Plug Domain JUNP479_2687 PF01177 Asp/Glu/Hydantoin racemase JUNP479_2693 PF00899 ThiF family JUNP479_2694 PF02657 Fe-S metabolism associated domain JUNP479_2695 PF00266 Aminotransferase class-V JUNP479_2696 PF00580 UvrD/REP helicase N-terminal domain JUNP479_2696 PF13361 UvrD-like helicase C-terminal domain JUNP479_2697 PF00563 EAL domain JUNP479_2697 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_2697 PF03707 Bacterial signalling protein N terminal repeat JUNP479_2698 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JUNP479_2699 PF08240 Alcohol dehydrogenase GroES-like domain JUNP479_2699 PF00107 Zinc-binding dehydrogenase JUNP479_2700 PF00155 Aminotransferase class I and II JUNP479_2701 PF08360 QacR-like protein, C-terminal region JUNP479_2701 PF00440 Bacterial regulatory proteins, tetR family JUNP479_2702 PF01370 NAD dependent epimerase/dehydratase family JUNP479_2706 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) JUNP479_2712 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JUNP479_2712 PF12833 Helix-turn-helix domain JUNP479_2713 PF01810 LysE type translocator JUNP479_2720 PF14001 YdfZ protein JUNP479_2726 PF13361 UvrD-like helicase C-terminal domain JUNP479_2726 PF00580 UvrD/REP helicase N-terminal domain JUNP479_2727 PF02608 ABC transporter substrate-binding protein PnrA-like JUNP479_2728 PF00005 ABC transporter JUNP479_2729 PF02653 Branched-chain amino acid transport system / permease component JUNP479_2730 PF02653 Branched-chain amino acid transport system / permease component JUNP479_2731 PF00571 CBS domain JUNP479_2731 PF01769 Divalent cation transporter JUNP479_2731 PF03448 MgtE intracellular N domain JUNP479_2732 PF05932 Tir chaperone protein (CesT) family JUNP479_2733 PF03543 Yersinia/Haemophilus virulence surface antigen JUNP479_2734 PF10414 Sirohaem synthase dimerisation region JUNP479_2734 PF14824 Sirohaem biosynthesis protein central JUNP479_2734 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JUNP479_2735 PF01226 Formate/nitrite transporter JUNP479_2736 PF13806 Rieske-like [2Fe-2S] domain JUNP479_2737 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JUNP479_2737 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JUNP479_2737 PF07992 Pyridine nucleotide-disulphide oxidoreductase JUNP479_2737 PF18267 Rubredoxin NAD+ reductase C-terminal domain JUNP479_2737 PF04324 BFD-like [2Fe-2S] binding domain JUNP479_2740 PF00005 ABC transporter JUNP479_2741 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JUNP479_2742 PF00440 Bacterial regulatory proteins, tetR family JUNP479_2743 PF00004 ATPase family associated with various cellular activities (AAA) JUNP479_2743 PF07724 AAA domain (Cdc48 subfamily) JUNP479_2743 PF10431 C-terminal, D2-small domain, of ClpB protein JUNP479_2744 PF00227 Proteasome subunit JUNP479_2746 PF03485 Arginyl tRNA synthetase N terminal domain JUNP479_2746 PF05746 DALR anticodon binding domain JUNP479_2746 PF00750 tRNA synthetases class I (R) JUNP479_2748 PF04542 Sigma-70 region 2 JUNP479_2748 PF04545 Sigma-70, region 4 JUNP479_2750 PF02673 Bacitracin resistance protein BacA JUNP479_2751 PF01263 Aldose 1-epimerase JUNP479_2752 PF10509 Galactokinase galactose-binding signature JUNP479_2752 PF00288 GHMP kinases N terminal domain JUNP479_2752 PF08544 GHMP kinases C terminal JUNP479_2753 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JUNP479_2753 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JUNP479_2754 PF16363 GDP-mannose 4,6 dehydratase JUNP479_2755 PF00356 Bacterial regulatory proteins, lacI family JUNP479_2756 PF02929 Beta galactosidase small chain JUNP479_2756 PF16353 Domain of unknown function(DUF4981) JUNP479_2756 PF00703 Glycosyl hydrolases family 2 JUNP479_2756 PF02837 Glycosyl hydrolases family 2, sugar binding domain JUNP479_2756 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JUNP479_2757 PF13407 Periplasmic binding protein domain JUNP479_2758 PF00005 ABC transporter JUNP479_2759 PF02653 Branched-chain amino acid transport system / permease component JUNP479_2760 PF00672 HAMP domain JUNP479_2760 PF02743 Cache domain JUNP479_2760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_2761 PF05958 tRNA (Uracil-5-)-methyltransferase JUNP479_2764 PF02903 Alpha amylase, N-terminal ig-like domain JUNP479_2764 PF00128 Alpha amylase, catalytic domain JUNP479_2767 PF00012 Hsp70 protein JUNP479_2768 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JUNP479_2768 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JUNP479_2769 PF05981 CreA protein JUNP479_2772 PF01258 Prokaryotic dksA/traR C4-type zinc finger JUNP479_2773 PF00120 Glutamine synthetase, catalytic domain JUNP479_2775 PF00202 Aminotransferase class-III JUNP479_2776 PF13416 Bacterial extracellular solute-binding protein JUNP479_2777 PF13416 Bacterial extracellular solute-binding protein JUNP479_2778 PF08402 TOBE domain JUNP479_2778 PF00005 ABC transporter JUNP479_2779 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_2780 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_2781 PF03475 3-alpha domain JUNP479_2781 PF03473 MOSC domain JUNP479_2784 PF03061 Thioesterase superfamily JUNP479_2785 PF09382 RQC domain JUNP479_2785 PF00570 HRDC domain JUNP479_2785 PF00271 Helicase conserved C-terminal domain JUNP479_2785 PF00270 DEAD/DEAH box helicase JUNP479_2785 PF16124 RecQ zinc-binding JUNP479_2786 PF00034 Cytochrome c JUNP479_2787 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JUNP479_2789 PF02592 Putative vitamin uptake transporter JUNP479_2790 PF03737 Aldolase/RraA JUNP479_2791 PF00672 HAMP domain JUNP479_2791 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_2793 PF06206 CpeT/CpcT family (DUF1001) JUNP479_2794 PF01197 Ribosomal protein L31 JUNP479_2795 PF00271 Helicase conserved C-terminal domain JUNP479_2795 PF17764 3′ DNA-binding domain (3′BD) JUNP479_2795 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JUNP479_2795 PF18074 Primosomal protein N C-terminal domain JUNP479_2795 PF00270 DEAD/DEAH box helicase JUNP479_2797 PF11066 Protein of unknown function (DUF2867) JUNP479_2797 PF13460 NAD(P)H-binding JUNP479_2798 PF03222 Tryptophan/tyrosine permease family JUNP479_2799 PF00390 Malic enzyme, N-terminal domain JUNP479_2799 PF03949 Malic enzyme, NAD binding domain JUNP479_2800 PF03631 Virulence factor BrkB JUNP479_2801 PF02580 D-Tyr-tRNA(Tyr) deacylase JUNP479_2802 PF17284 Spermidine synthase tetramerisation domain JUNP479_2803 PF09500 Putative thioesterase (yiiD_Cterm) JUNP479_2803 PF00583 Acetyltransferase (GNAT) family JUNP479_2805 PF00271 Helicase conserved C-terminal domain JUNP479_2805 PF17191 RecG wedge domain JUNP479_2805 PF00270 DEAD/DEAH box helicase JUNP479_2806 PF13091 PLD-like domain JUNP479_2807 PF02447 GntP family permease JUNP479_2808 PF01202 Shikimate kinase JUNP479_2809 PF00920 Dehydratase family JUNP479_2810 PF01081 KDPG and KHG aldolase JUNP479_2813 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JUNP479_2813 PF00356 Bacterial regulatory proteins, lacI family JUNP479_2815 PF01551 Peptidase family M23 JUNP479_2816 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JUNP479_2816 PF01676 Metalloenzyme superfamily JUNP479_2817 PF00581 Rhodanese-like domain JUNP479_2818 PF02556 Preprotein translocase subunit SecB JUNP479_2819 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JUNP479_2819 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JUNP479_2820 PF01106 NifU-like domain JUNP479_2820 PF01521 Iron-sulphur cluster biosynthesis JUNP479_2821 PF00156 Phosphoribosyl transferase domain JUNP479_2822 PF00561 alpha/beta hydrolase fold JUNP479_2826 PF09371 Tex-like protein N-terminal domain JUNP479_2826 PF16921 Tex protein YqgF-like domain JUNP479_2826 PF17674 HHH domain JUNP479_2826 PF00575 S1 RNA binding domain JUNP479_2827 PF01272 Transcription elongation factor, GreA/GreB, C-term JUNP479_2827 PF03449 Transcription elongation factor, N-terminal JUNP479_2828 PF00486 Transcriptional regulatory protein, C terminal JUNP479_2828 PF00072 Response regulator receiver domain JUNP479_2829 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_2829 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_2829 PF00672 HAMP domain JUNP479_2831 PF00338 Ribosomal protein S10p/S20e JUNP479_2832 PF00297 Ribosomal protein L3 JUNP479_2833 PF00573 Ribosomal protein L4/L1 family JUNP479_2834 PF00276 Ribosomal protein L23 JUNP479_2835 PF00181 Ribosomal Proteins L2, RNA binding domain JUNP479_2835 PF03947 Ribosomal Proteins L2, C-terminal domain JUNP479_2836 PF00203 Ribosomal protein S19 JUNP479_2837 PF00237 Ribosomal protein L22p/L17e JUNP479_2838 PF07650 KH domain JUNP479_2838 PF00189 Ribosomal protein S3, C-terminal domain JUNP479_2839 PF00252 Ribosomal protein L16p/L10e JUNP479_2840 PF00831 Ribosomal L29 protein JUNP479_2841 PF00366 Ribosomal protein S17 JUNP479_2842 PF00238 Ribosomal protein L14p/L23e JUNP479_2843 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JUNP479_2843 PF00467 KOW motif JUNP479_2844 PF00673 ribosomal L5P family C-terminus JUNP479_2844 PF00281 Ribosomal protein L5 JUNP479_2845 PF00253 Ribosomal protein S14p/S29e JUNP479_2846 PF00410 Ribosomal protein S8 JUNP479_2847 PF00347 Ribosomal protein L6 JUNP479_2848 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JUNP479_2849 PF00333 Ribosomal protein S5, N-terminal domain JUNP479_2849 PF03719 Ribosomal protein S5, C-terminal domain JUNP479_2850 PF00327 Ribosomal protein L30p/L7e JUNP479_2851 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JUNP479_2852 PF00344 SecY translocase JUNP479_2853 PF00416 Ribosomal protein S13/S18 JUNP479_2854 PF00411 Ribosomal protein S11 JUNP479_2855 PF00163 Ribosomal protein S4/S9 N-terminal domain JUNP479_2855 PF01479 S4 domain JUNP479_2856 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JUNP479_2856 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JUNP479_2856 PF01000 RNA polymerase Rpb3/RpoA insert domain JUNP479_2857 PF01196 Ribosomal protein L17 JUNP479_2864 PF00593 TonB dependent receptor JUNP479_2864 PF07715 TonB-dependent Receptor Plug Domain JUNP479_2865 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_2865 PF17158 Membrane-associated sensor, integral membrane domain JUNP479_2866 PF00672 HAMP domain JUNP479_2866 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_2866 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_2867 PF00486 Transcriptional regulatory protein, C terminal JUNP479_2867 PF00072 Response regulator receiver domain JUNP479_2869 PF03466 LysR substrate binding domain JUNP479_2869 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_2871 PF02678 Pirin JUNP479_2871 PF17954 Quercetinase C-terminal cupin domain JUNP479_2872 PF07681 DoxX JUNP479_2873 PF17946 RecC C-terminal domain JUNP479_2874 PF13361 UvrD-like helicase C-terminal domain JUNP479_2874 PF00580 UvrD/REP helicase N-terminal domain JUNP479_2874 PF12705 PD-(D/E)XK nuclease superfamily JUNP479_2875 PF13538 UvrD-like helicase C-terminal domain JUNP479_2877 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_2879 PF03606 C4-dicarboxylate anaerobic carrier JUNP479_2881 PF07702 UTRA domain JUNP479_2881 PF00392 Bacterial regulatory proteins, gntR family JUNP479_2884 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_2886 PF08402 TOBE domain JUNP479_2886 PF00005 ABC transporter JUNP479_2888 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_2892 PF01053 Cys/Met metabolism PLP-dependent enzyme JUNP479_2894 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JUNP479_2894 PF12793 Sugar transport-related sRNA regulator N-term JUNP479_2897 PF03280 Proteobacterial lipase chaperone protein JUNP479_2898 PF00561 alpha/beta hydrolase fold JUNP479_2899 PF00579 tRNA synthetases class I (W and Y) JUNP479_2899 PF01479 S4 domain JUNP479_2900 PF00196 Bacterial regulatory proteins, luxR family JUNP479_2904 PF04229 GrpB protein JUNP479_2904 PF13673 Acetyltransferase (GNAT) domain JUNP479_2905 PF00583 Acetyltransferase (GNAT) family JUNP479_2909 PF08264 Anticodon-binding domain of tRNA JUNP479_2909 PF00133 tRNA synthetases class I (I, L, M and V) JUNP479_2909 PF10458 Valyl tRNA synthetase tRNA binding arm JUNP479_2910 PF04364 DNA polymerase III chi subunit, HolC JUNP479_2911 PF02789 Cytosol aminopeptidase family, N-terminal domain JUNP479_2911 PF00883 Cytosol aminopeptidase family, catalytic domain JUNP479_2912 PF03739 Lipopolysaccharide export system permease LptF/LptG JUNP479_2913 PF03739 Lipopolysaccharide export system permease LptF/LptG JUNP479_2916 PF00589 Phage integrase family JUNP479_2916 PF13356 Arm DNA-binding domain JUNP479_2923 PF18818 Metallopeptidase superfamily domain JUNP479_2923 PF13362 Toprim domain JUNP479_2923 PF08401 Domain of unknown function (DUF1738) JUNP479_2929 PF00593 TonB dependent receptor JUNP479_2929 PF07715 TonB-dependent Receptor Plug Domain JUNP479_2931 PF00768 D-alanyl-D-alanine carboxypeptidase JUNP479_2932 PF13520 Amino acid permease JUNP479_2936 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JUNP479_2937 PF03692 Putative zinc- or iron-chelating domain JUNP479_2939 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase JUNP479_2940 PF02602 Uroporphyrinogen-III synthase HemD JUNP479_2941 PF03900 Porphobilinogen deaminase, C-terminal domain JUNP479_2941 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JUNP479_2943 PF01295 Adenylate cyclase, class-I JUNP479_2943 PF12633 Adenylate cyclase NT domain JUNP479_2944 PF02230 Phospholipase/Carboxylesterase JUNP479_2945 PF01491 Frataxin-like domain JUNP479_2947 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JUNP479_2947 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JUNP479_2948 PF01678 Diaminopimelate epimerase JUNP479_2950 PF00589 Phage integrase family JUNP479_2950 PF02899 Phage integrase, N-terminal SAM-like domain JUNP479_2951 PF13419 Haloacid dehalogenase-like hydrolase JUNP479_2952 PF00027 Cyclic nucleotide-binding domain JUNP479_2952 PF07885 Ion channel JUNP479_2954 PF07722 Peptidase C26 JUNP479_2956 PF01523 Putative modulator of DNA gyrase JUNP479_2957 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JUNP479_2958 PF01722 BolA-like protein JUNP479_2960 PF05494 MlaC protein JUNP479_2961 PF02470 MlaD protein JUNP479_2962 PF02405 Permease MlaE JUNP479_2963 PF00005 ABC transporter JUNP479_2964 PF01380 SIS domain JUNP479_2964 PF00571 CBS domain JUNP479_2967 PF03968 OstA-like protein JUNP479_2968 PF12399 Branched-chain amino acid ATP-binding cassette transporter JUNP479_2968 PF00005 ABC transporter JUNP479_2969 PF00309 Sigma-54 factor, Activator interacting domain (AID) JUNP479_2969 PF04963 Sigma-54 factor, core binding domain JUNP479_2969 PF04552 Sigma-54, DNA binding domain JUNP479_2970 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JUNP479_2971 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JUNP479_2972 PF03668 P-loop ATPase protein family JUNP479_2973 PF00381 PTS HPr component phosphorylation site JUNP479_2974 PF00874 PRD domain JUNP479_2974 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JUNP479_2974 PF08279 HTH domain JUNP479_2974 PF05043 Mga helix-turn-helix domain JUNP479_2975 PF07071 KDGP aldolase JUNP479_2976 PF03841 L-seryl-tRNA selenium transferase JUNP479_2977 PF01979 Amidohydrolase family JUNP479_2983 PF13180 PDZ domain JUNP479_2984 PF13180 PDZ domain JUNP479_2984 PF00595 PDZ domain JUNP479_2986 PF03969 AFG1-like ATPase JUNP479_2987 PF00572 Ribosomal protein L13 JUNP479_2988 PF00380 Ribosomal protein S9/S16 JUNP479_2989 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal JUNP479_2989 PF00355 Rieske [2Fe-2S] domain JUNP479_2990 PF00033 Cytochrome b/b6/petB JUNP479_2990 PF00032 Cytochrome b(C-terminal)/b6/petD JUNP479_2991 PF02167 Cytochrome C1 family JUNP479_2992 PF02798 Glutathione S-transferase, N-terminal domain JUNP479_2992 PF00043 Glutathione S-transferase, C-terminal domain JUNP479_2993 PF04386 Stringent starvation protein B JUNP479_2995 PF13580 SIS domain JUNP479_2996 PF02021 Uncharacterised protein family UPF0102 JUNP479_2997 PF04348 LppC putative lipoprotein JUNP479_2998 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JUNP479_3000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JUNP479_3001 PF00813 FliP family JUNP479_3002 PF01313 Bacterial export proteins, family 3 JUNP479_3003 PF01311 Bacterial export proteins, family 1 JUNP479_3004 PF01312 FlhB HrpN YscU SpaS Family JUNP479_3005 PF00771 FHIPEP family JUNP479_3006 PF00072 Response regulator receiver domain JUNP479_3006 PF02954 Bacterial regulatory protein, Fis family JUNP479_3006 PF00158 Sigma-54 interaction domain JUNP479_3007 PF02049 Flagellar hook-basal body complex protein FliE JUNP479_3008 PF01514 Secretory protein of YscJ/FliF family JUNP479_3008 PF08345 Flagellar M-ring protein C-terminal JUNP479_3009 PF01706 FliG C-terminal domain JUNP479_3009 PF14841 FliG middle domain JUNP479_3009 PF14842 FliG N-terminal domain JUNP479_3011 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JUNP479_3011 PF18269 T3SS EscN ATPase C-terminal domain JUNP479_3014 PF04316 Anti-sigma-28 factor, FlgM JUNP479_3016 PF00460 Flagella basal body rod protein JUNP479_3017 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JUNP479_3017 PF00460 Flagella basal body rod protein JUNP479_3018 PF13861 FlgD Tudor-like domain JUNP479_3018 PF13860 FlgD Ig-like domain JUNP479_3018 PF03963 Flagellar hook capping protein - N-terminal region JUNP479_3019 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JUNP479_3019 PF00460 Flagella basal body rod protein JUNP479_3019 PF07559 Flagellar basal body protein FlaE JUNP479_3020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JUNP479_3020 PF00460 Flagella basal body rod protein JUNP479_3021 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JUNP479_3021 PF00460 Flagella basal body rod protein JUNP479_3022 PF02107 Flagellar L-ring protein JUNP479_3023 PF02119 Flagellar P-ring protein JUNP479_3025 PF00460 Flagella basal body rod protein JUNP479_3025 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JUNP479_3026 PF00669 Bacterial flagellin N-terminal helical region JUNP479_3030 PF00669 Bacterial flagellin N-terminal helical region JUNP479_3030 PF00700 Bacterial flagellin C-terminal helical region JUNP479_3031 PF07195 Flagellar hook-associated protein 2 C-terminus JUNP479_3031 PF02465 Flagellar hook-associated protein 2 N-terminus JUNP479_3031 PF07196 Flagellin hook IN motif JUNP479_3032 PF02561 Flagellar protein FliS JUNP479_3036 PF04542 Sigma-70 region 2 JUNP479_3036 PF04545 Sigma-70, region 4 JUNP479_3037 PF01618 MotA/TolQ/ExbB proton channel family JUNP479_3038 PF00691 OmpA family JUNP479_3038 PF13677 Membrane MotB of proton-channel complex MotA/MotB JUNP479_3039 PF01476 LysM domain JUNP479_3039 PF01464 Transglycosylase SLT domain JUNP479_3041 PF02381 MraZ protein, putative antitoxin-like JUNP479_3042 PF01795 MraW methylase family JUNP479_3043 PF04999 Cell division protein FtsL JUNP479_3044 PF00905 Penicillin binding protein transpeptidase domain JUNP479_3044 PF03717 Penicillin-binding Protein dimerisation domain JUNP479_3045 PF02875 Mur ligase family, glutamate ligase domain JUNP479_3045 PF01225 Mur ligase family, catalytic domain JUNP479_3045 PF08245 Mur ligase middle domain JUNP479_3046 PF08245 Mur ligase middle domain JUNP479_3046 PF02875 Mur ligase family, glutamate ligase domain JUNP479_3046 PF01225 Mur ligase family, catalytic domain JUNP479_3047 PF00953 Glycosyl transferase family 4 JUNP479_3047 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JUNP479_3048 PF02875 Mur ligase family, glutamate ligase domain JUNP479_3048 PF08245 Mur ligase middle domain JUNP479_3049 PF01098 Cell cycle protein JUNP479_3050 PF04101 Glycosyltransferase family 28 C-terminal domain JUNP479_3050 PF03033 Glycosyltransferase family 28 N-terminal domain JUNP479_3051 PF08245 Mur ligase middle domain JUNP479_3051 PF01225 Mur ligase family, catalytic domain JUNP479_3051 PF02875 Mur ligase family, glutamate ligase domain JUNP479_3052 PF03799 Cell division protein FtsQ JUNP479_3052 PF08478 POTRA domain, FtsQ-type JUNP479_3053 PF02491 SHS2 domain inserted in FTSA JUNP479_3054 PF00091 Tubulin/FtsZ family, GTPase domain JUNP479_3054 PF12327 FtsZ family, C-terminal domain JUNP479_3055 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JUNP479_3056 PF01551 Peptidase family M23 JUNP479_3057 PF02810 SEC-C motif JUNP479_3057 PF07517 SecA DEAD-like domain JUNP479_3057 PF01043 SecA preprotein cross-linking domain JUNP479_3057 PF07516 SecA Wing and Scaffold domain JUNP479_3058 PF00293 NUDIX domain JUNP479_3059 PF03884 DNA gyrase inhibitor YacG JUNP479_3060 PF07072 Cell division protein JUNP479_3061 PF01121 Dephospho-CoA kinase JUNP479_3062 PF01478 Type IV leader peptidase family JUNP479_3062 PF06750 Bacterial Peptidase A24 N-terminal domain JUNP479_3063 PF00482 Type II secretion system (T2SS), protein F JUNP479_3064 PF00437 Type II/IV secretion system protein JUNP479_3064 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JUNP479_3065 PF07963 Prokaryotic N-terminal methylation motif JUNP479_3066 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JUNP479_3066 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JUNP479_3068 PF01510 N-acetylmuramoyl-L-alanine amidase JUNP479_3069 PF00392 Bacterial regulatory proteins, gntR family JUNP479_3069 PF07729 FCD domain JUNP479_3070 PF17831 Pyruvate dehydrogenase E1 component middle domain JUNP479_3070 PF00456 Transketolase, thiamine diphosphate binding domain JUNP479_3071 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JUNP479_3071 PF02817 e3 binding domain JUNP479_3071 PF00364 Biotin-requiring enzyme JUNP479_3072 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JUNP479_3072 PF07992 Pyridine nucleotide-disulphide oxidoreductase JUNP479_3074 PF12729 Four helix bundle sensory module for signal transduction JUNP479_3074 PF00672 HAMP domain JUNP479_3074 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_3075 PF01734 Patatin-like phospholipase JUNP479_3076 PF00330 Aconitase family (aconitate hydratase) JUNP479_3076 PF06434 Aconitate hydratase 2 N-terminus JUNP479_3076 PF11791 Aconitate B N-terminal domain JUNP479_3078 PF00563 EAL domain JUNP479_3078 PF12792 CSS motif domain associated with EAL JUNP479_3080 PF07683 Cobalamin synthesis protein cobW C-terminal domain JUNP479_3080 PF02492 CobW/HypB/UreG, nucleotide-binding domain JUNP479_3081 PF07690 Major Facilitator Superfamily JUNP479_3082 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JUNP479_3083 PF02152 Dihydroneopterin aldolase JUNP479_3084 PF02660 Glycerol-3-phosphate acyltransferase JUNP479_3089 PF07670 Nucleoside recognition JUNP479_3094 PF14698 Argininosuccinate lyase C-terminal JUNP479_3094 PF00206 Lyase JUNP479_3095 PF00764 Arginosuccinate synthase JUNP479_3096 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JUNP479_3096 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JUNP479_3097 PF00696 Amino acid kinase family JUNP479_3098 PF02774 Semialdehyde dehydrogenase, dimerisation domain JUNP479_3098 PF01118 Semialdehyde dehydrogenase, NAD binding domain JUNP479_3099 PF07687 Peptidase dimerisation domain JUNP479_3099 PF01546 Peptidase family M20/M25/M40 JUNP479_3100 PF00311 Phosphoenolpyruvate carboxylase JUNP479_3102 PF04073 Aminoacyl-tRNA editing domain JUNP479_3105 PF03466 LysR substrate binding domain JUNP479_3105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_3108 PF00155 Aminotransferase class I and II JUNP479_3108 PF00392 Bacterial regulatory proteins, gntR family JUNP479_3109 PF03788 LrgA family JUNP479_3110 PF04172 LrgB-like family JUNP479_3112 PF01734 Patatin-like phospholipase JUNP479_3113 PF05190 MutS family domain IV JUNP479_3113 PF05192 MutS domain III JUNP479_3113 PF05188 MutS domain II JUNP479_3113 PF01624 MutS domain I JUNP479_3113 PF00488 MutS domain V JUNP479_3114 PF02464 Competence-damaged protein JUNP479_3115 PF00154 recA bacterial DNA recombination protein JUNP479_3116 PF02631 RecX family JUNP479_3117 PF02272 DHHA1 domain JUNP479_3117 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JUNP479_3117 PF01411 tRNA synthetases class II (A) JUNP479_3118 PF01842 ACT domain JUNP479_3118 PF13840 ACT domain JUNP479_3118 PF00696 Amino acid kinase family JUNP479_3119 PF02599 Global regulator protein family JUNP479_3126 PF00768 D-alanyl-D-alanine carboxypeptidase JUNP479_3127 PF09335 SNARE associated Golgi protein JUNP479_3128 PF03471 Transporter associated domain JUNP479_3128 PF01595 Cyclin M transmembrane N-terminal domain JUNP479_3128 PF00571 CBS domain JUNP479_3129 PF17763 Glutaminase/Asparaginase C-terminal domain JUNP479_3129 PF00710 Asparaginase, N-terminal JUNP479_3132 PF00356 Bacterial regulatory proteins, lacI family JUNP479_3133 PF00367 phosphotransferase system, EIIB JUNP479_3133 PF02378 Phosphotransferase system, EIIC JUNP479_3134 PF11941 Domain of unknown function (DUF3459) JUNP479_3134 PF00128 Alpha amylase, catalytic domain JUNP479_3135 PF14602 Hexapeptide repeat of succinyl-transferase JUNP479_3135 PF12464 Maltose acetyltransferase JUNP479_3137 PF00849 RNA pseudouridylate synthase JUNP479_3138 PF18339 RapA N-terminal Tudor like domain 1 JUNP479_3138 PF18337 RapA N-terminal Tudor like domain JUNP479_3138 PF00271 Helicase conserved C-terminal domain JUNP479_3138 PF00176 SNF2 family N-terminal domain JUNP479_3138 PF12137 RNA polymerase recycling family C-terminal JUNP479_3145 PF04363 Protein of unknown function (DUF496) JUNP479_3149 PF00994 Probable molybdopterin binding domain JUNP479_3149 PF02464 Competence-damaged protein JUNP479_3150 PF00013 KH domain JUNP479_3150 PF12072 Domain of unknown function (DUF3552) JUNP479_3150 PF01966 HD domain JUNP479_3151 PF04204 Homoserine O-succinyltransferase JUNP479_3153 PF01037 Lrp/AsnC ligand binding domain JUNP479_3154 PF00884 Sulfatase JUNP479_3157 PF00128 Alpha amylase, catalytic domain JUNP479_3157 PF02903 Alpha amylase, N-terminal ig-like domain JUNP479_3157 PF16657 Maltogenic Amylase, C-terminal domain JUNP479_3158 PF02308 MgtC family JUNP479_3162 PF00106 short chain dehydrogenase JUNP479_3163 PF03577 Peptidase family C69 JUNP479_3165 PF00465 Iron-containing alcohol dehydrogenase JUNP479_3166 PF02142 MGS-like domain JUNP479_3167 PF00210 Ferritin-like domain JUNP479_3170 PF13718 GNAT acetyltransferase 2 JUNP479_3170 PF08351 Domain of unknown function (DUF1726) JUNP479_3170 PF05127 Helicase JUNP479_3170 PF17176 tRNA-binding domain JUNP479_3172 PF01584 CheW-like domain JUNP479_3172 PF00072 Response regulator receiver domain JUNP479_3173 PF02698 DUF218 domain JUNP479_3174 PF01752 Collagenase JUNP479_3174 PF08453 Peptidase family M9 N-terminal JUNP479_3175 PF00501 AMP-binding enzyme JUNP479_3176 PF13378 Enolase C-terminal domain-like JUNP479_3177 PF00378 Enoyl-CoA hydratase/isomerase JUNP479_3178 PF12697 Alpha/beta hydrolase family JUNP479_3179 PF16582 Middle domain of thiamine pyrophosphate JUNP479_3179 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JUNP479_3179 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JUNP479_3180 PF00425 chorismate binding enzyme JUNP479_3181 PF01040 UbiA prenyltransferase family JUNP479_3185 PF03880 DbpA RNA binding domain JUNP479_3185 PF00270 DEAD/DEAH box helicase JUNP479_3185 PF00271 Helicase conserved C-terminal domain JUNP479_3187 PF01773 Na+ dependent nucleoside transporter N-terminus JUNP479_3187 PF07670 Nucleoside recognition JUNP479_3187 PF07662 Na+ dependent nucleoside transporter C-terminus JUNP479_3188 PF04307 LexA-binding, inner membrane-associated putative hydrolase JUNP479_3191 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JUNP479_3192 PF01544 CorA-like Mg2+ transporter protein JUNP479_3196 PF05068 Mannitol repressor JUNP479_3197 PF08125 Mannitol dehydrogenase C-terminal domain JUNP479_3197 PF01232 Mannitol dehydrogenase Rossmann domain JUNP479_3198 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JUNP479_3198 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JUNP479_3198 PF02378 Phosphotransferase system, EIIC JUNP479_3199 PF03279 Bacterial lipid A biosynthesis acyltransferase JUNP479_3200 PF00294 pfkB family carbohydrate kinase JUNP479_3200 PF01467 Cytidylyltransferase-like JUNP479_3201 PF02321 Outer membrane efflux protein JUNP479_3202 PF00293 NUDIX domain JUNP479_3203 PF06853 Protein of unknown function (DUF1249) JUNP479_3204 PF00149 Calcineurin-like phosphoesterase JUNP479_3205 PF05728 Uncharacterised protein family (UPF0227) JUNP479_3206 PF00293 NUDIX domain JUNP479_3208 PF07869 Protein of unknown function (DUF1656) JUNP479_3209 PF00529 HlyD membrane-fusion protein of T1SS JUNP479_3209 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JUNP479_3210 PF04632 Fusaric acid resistance protein family JUNP479_3211 PF00204 DNA gyrase B JUNP479_3211 PF01751 Toprim domain JUNP479_3211 PF00986 DNA gyrase B subunit, carboxyl terminus JUNP479_3211 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_3212 PF00521 DNA gyrase/topoisomerase IV, subunit A JUNP479_3212 PF03989 DNA gyrase C-terminal domain, beta-propeller JUNP479_3214 PF02600 Disulfide bond formation protein DsbB JUNP479_3217 PF03466 LysR substrate binding domain JUNP479_3217 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_3219 PF00854 POT family JUNP479_3223 PF00226 DnaJ domain JUNP479_3223 PF01556 DnaJ C terminal domain JUNP479_3223 PF00684 DnaJ central domain JUNP479_3225 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JUNP479_3225 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JUNP479_3226 PF03466 LysR substrate binding domain JUNP479_3226 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_3227 PF00578 AhpC/TSA family JUNP479_3231 PF01553 Acyltransferase JUNP479_3232 PF04012 PspA/IM30 family JUNP479_3235 PF01541 GIY-YIG catalytic domain JUNP479_3237 PF00892 EamA-like transporter family JUNP479_3238 PF03167 Uracil DNA glycosylase superfamily JUNP479_3239 PF00892 EamA-like transporter family JUNP479_3241 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_3241 PF03466 LysR substrate binding domain JUNP479_3242 PF00950 ABC 3 transport family JUNP479_3243 PF00005 ABC transporter JUNP479_3244 PF01297 Zinc-uptake complex component A periplasmic JUNP479_3248 PF01551 Peptidase family M23 JUNP479_3248 PF01476 LysM domain JUNP479_3248 PF08525 Opacity-associated protein A N-terminal motif JUNP479_3249 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JUNP479_3250 PF04222 Protein of unknown function (DUF416) JUNP479_3253 PF02028 BCCT, betaine/carnitine/choline family transporter JUNP479_3254 PF12627 Probable RNA and SrmB- binding site of polymerase A JUNP479_3254 PF01966 HD domain JUNP479_3254 PF01743 Poly A polymerase head domain JUNP479_3255 PF14815 NUDIX domain JUNP479_3255 PF00730 HhH-GPD superfamily base excision DNA repair protein JUNP479_3255 PF00633 Helix-hairpin-helix motif JUNP479_3255 PF10576 Iron-sulfur binding domain of endonuclease III JUNP479_3256 PF04362 Bacterial Fe(2+) trafficking JUNP479_3257 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JUNP479_3257 PF01464 Transglycosylase SLT domain JUNP479_3259 PF00657 GDSL-like Lipase/Acylhydrolase JUNP479_3260 PF00691 OmpA family JUNP479_3260 PF01389 OmpA-like transmembrane domain JUNP479_3261 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_3262 PF17876 Cold shock domain JUNP479_3262 PF08461 Ribonuclease R winged-helix domain JUNP479_3262 PF00773 RNB domain JUNP479_3262 PF00575 S1 RNA binding domain JUNP479_3262 PF08206 Ribonuclease B OB domain JUNP479_3263 PF08032 RNA 2'-O ribose methyltransferase substrate binding JUNP479_3263 PF00588 SpoU rRNA Methylase family JUNP479_3265 PF13673 Acetyltransferase (GNAT) domain JUNP479_3266 PF00270 DEAD/DEAH box helicase JUNP479_3266 PF00271 Helicase conserved C-terminal domain JUNP479_3267 PF05175 Methyltransferase small domain JUNP479_3268 PF05525 Branched-chain amino acid transport protein JUNP479_3269 PF05525 Branched-chain amino acid transport protein JUNP479_3272 PF01475 Ferric uptake regulator family JUNP479_3273 PF01207 Dihydrouridine synthase (Dus) JUNP479_3274 PF08447 PAS fold JUNP479_3274 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_3276 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JUNP479_3278 PF00132 Bacterial transferase hexapeptide (six repeats) JUNP479_3279 PF10952 Protein of unknown function (DUF2753) JUNP479_3280 PF00378 Enoyl-CoA hydratase/isomerase JUNP479_3283 PF00106 short chain dehydrogenase JUNP479_3284 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JUNP479_3284 PF03129 Anticodon binding domain JUNP479_3284 PF04073 Aminoacyl-tRNA editing domain JUNP479_3286 PF01938 TRAM domain JUNP479_3286 PF05958 tRNA (Uracil-5-)-methyltransferase JUNP479_3287 PF03886 ABC-type transport auxiliary lipoprotein component JUNP479_3288 PF02470 MlaD protein JUNP479_3289 PF04403 Paraquat-inducible protein A JUNP479_3290 PF17209 Hfq protein JUNP479_3291 PF13419 Haloacid dehalogenase-like hydrolase JUNP479_3293 PF00360 Phytochrome region JUNP479_3293 PF01590 GAF domain JUNP479_3293 PF00563 EAL domain JUNP479_3293 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_3294 PF17876 Cold shock domain JUNP479_3294 PF08206 Ribonuclease B OB domain JUNP479_3294 PF00773 RNB domain JUNP479_3295 PF03466 LysR substrate binding domain JUNP479_3295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_3296 PF00765 Autoinducer synthase JUNP479_3297 PF03472 Autoinducer binding domain JUNP479_3297 PF00196 Bacterial regulatory proteins, luxR family JUNP479_3298 PF01810 LysE type translocator JUNP479_3299 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_3299 PF12729 Four helix bundle sensory module for signal transduction JUNP479_3299 PF00672 HAMP domain JUNP479_3300 PF07499 RuvA, C-terminal domain JUNP479_3300 PF01330 RuvA N terminal domain JUNP479_3301 PF05496 Holliday junction DNA helicase RuvB P-loop domain JUNP479_3301 PF17864 RuvB AAA lid domain JUNP479_3301 PF05491 RuvB C-terminal winged helix domain JUNP479_3302 PF01654 Cytochrome bd terminal oxidase subunit I JUNP479_3303 PF02322 Cytochrome bd terminal oxidase subunit II JUNP479_3304 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) JUNP479_3305 PF03061 Thioesterase superfamily JUNP479_3306 PF01618 MotA/TolQ/ExbB proton channel family JUNP479_3307 PF02472 Biopolymer transport protein ExbD/TolR JUNP479_3309 PF04052 TolB amino-terminal domain JUNP479_3309 PF07676 WD40-like Beta Propeller Repeat JUNP479_3310 PF00691 OmpA family JUNP479_3312 PF13174 Tetratricopeptide repeat JUNP479_3312 PF16331 TolA binding protein trimerisation JUNP479_3326 PF00209 Sodium:neurotransmitter symporter family JUNP479_3328 PF00209 Sodium:neurotransmitter symporter family JUNP479_3332 PF07690 Major Facilitator Superfamily JUNP479_3334 PF01037 Lrp/AsnC ligand binding domain JUNP479_3336 PF00293 NUDIX domain JUNP479_3338 PF01641 SelR domain JUNP479_3339 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JUNP479_3339 PF00128 Alpha amylase, catalytic domain JUNP479_3340 PF00128 Alpha amylase, catalytic domain JUNP479_3340 PF02806 Alpha amylase, C-terminal all-beta domain JUNP479_3340 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JUNP479_3341 PF02446 4-alpha-glucanotransferase JUNP479_3343 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JUNP479_3343 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JUNP479_3344 PF01263 Aldose 1-epimerase JUNP479_3345 PF02445 Quinolinate synthetase A protein JUNP479_3346 PF00672 HAMP domain JUNP479_3346 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_3347 PF01957 NfeD-like C-terminal, partner-binding JUNP479_3348 PF16200 C-terminal region of band_7 JUNP479_3348 PF01145 SPFH domain / Band 7 family JUNP479_3349 PF14824 Sirohaem biosynthesis protein central JUNP479_3349 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JUNP479_3349 PF10414 Sirohaem synthase dimerisation region JUNP479_3350 PF01507 Phosphoadenosine phosphosulfate reductase family JUNP479_3351 PF00009 Elongation factor Tu GTP binding domain JUNP479_3355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_3355 PF00672 HAMP domain JUNP479_3355 PF17200 Single Cache domain 2 JUNP479_3359 PF00005 ABC transporter JUNP479_3362 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) JUNP479_3365 PF00719 Inorganic pyrophosphatase JUNP479_3366 PF11849 Domain of unknown function (DUF3369) JUNP479_3368 PF00893 Small Multidrug Resistance protein JUNP479_3369 PF00893 Small Multidrug Resistance protein JUNP479_3370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JUNP479_3371 PF00912 Transglycosylase JUNP479_3371 PF00905 Penicillin binding protein transpeptidase domain JUNP479_3371 PF14814 Bifunctional transglycosylase second domain JUNP479_3372 PF08482 ATP-dependent helicase C-terminal JUNP479_3372 PF00270 DEAD/DEAH box helicase JUNP479_3372 PF00271 Helicase conserved C-terminal domain JUNP479_3372 PF04408 Helicase associated domain (HA2) JUNP479_3374 PF17746 SfsA N-terminal OB domain JUNP479_3374 PF03749 Sugar fermentation stimulation protein RE domain JUNP479_3375 PF01258 Prokaryotic dksA/traR C4-type zinc finger JUNP479_3376 PF00749 tRNA synthetases class I (E and Q), catalytic domain JUNP479_3377 PF12627 Probable RNA and SrmB- binding site of polymerase A JUNP479_3377 PF12626 Polymerase A arginine-rich C-terminus JUNP479_3377 PF01743 Poly A polymerase head domain JUNP479_3378 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JUNP479_3379 PF02548 Ketopantoate hydroxymethyltransferase JUNP479_3380 PF02569 Pantoate-beta-alanine ligase JUNP479_3382 PF00375 Sodium:dicarboxylate symporter family JUNP479_3386 PF01869 BadF/BadG/BcrA/BcrD ATPase family JUNP479_3387 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component JUNP479_3388 PF01061 ABC-2 type transporter JUNP479_3389 PF00005 ABC transporter JUNP479_3390 PF00156 Phosphoribosyl transferase domain JUNP479_3391 PF00440 Bacterial regulatory proteins, tetR family JUNP479_3392 PF02441 Flavoprotein JUNP479_3393 PF08245 Mur ligase middle domain JUNP479_3393 PF01225 Mur ligase family, catalytic domain JUNP479_3393 PF02875 Mur ligase family, glutamate ligase domain JUNP479_3394 PF01569 PAP2 superfamily JUNP479_3395 PF16363 GDP-mannose 4,6 dehydratase JUNP479_3396 PF00111 2Fe-2S iron-sulfur cluster binding domain JUNP479_3396 PF00970 Oxidoreductase FAD-binding domain JUNP479_3396 PF00175 Oxidoreductase NAD-binding domain JUNP479_3397 PF03063 Prismane/CO dehydrogenase family JUNP479_3398 PF00210 Ferritin-like domain JUNP479_3399 PF01510 N-acetylmuramoyl-L-alanine amidase JUNP479_3400 PF07308 Protein of unknown function (DUF1456) JUNP479_3401 PF00672 HAMP domain JUNP479_3401 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JUNP479_3401 PF00072 Response regulator receiver domain JUNP479_3401 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_3401 PF01627 Hpt domain JUNP479_3401 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_3402 PF01938 TRAM domain JUNP479_3402 PF05958 tRNA (Uracil-5-)-methyltransferase JUNP479_3403 PF02824 TGS domain JUNP479_3403 PF13291 ACT domain JUNP479_3403 PF04607 Region found in RelA / SpoT proteins JUNP479_3404 PF03819 MazG nucleotide pyrophosphohydrolase domain JUNP479_3405 PF06418 CTP synthase N-terminus JUNP479_3405 PF00117 Glutamine amidotransferase class-I JUNP479_3406 PF00113 Enolase, C-terminal TIM barrel domain JUNP479_3406 PF03952 Enolase, N-terminal domain JUNP479_3408 PF00561 alpha/beta hydrolase fold JUNP479_3412 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JUNP479_3414 PF00005 ABC transporter JUNP479_3414 PF12848 ABC transporter JUNP479_3418 PF00392 Bacterial regulatory proteins, gntR family JUNP479_3418 PF00155 Aminotransferase class I and II JUNP479_3420 PF01810 LysE type translocator JUNP479_3421 PF01177 Asp/Glu/Hydantoin racemase JUNP479_3423 PF04074 YhcH/YjgK/YiaL JUNP479_3424 PF00871 Acetokinase family JUNP479_3425 PF00924 Mechanosensitive ion channel JUNP479_3426 PF17969 L,D-transpeptidase C-terminal domain JUNP479_3426 PF03734 L,D-transpeptidase catalytic domain JUNP479_3428 PF00474 Sodium:solute symporter family JUNP479_3429 PF04977 Septum formation initiator JUNP479_3430 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JUNP479_3431 PF02542 YgbB family JUNP479_3432 PF01142 tRNA pseudouridine synthase D (TruD) JUNP479_3433 PF01975 Survival protein SurE JUNP479_3435 PF09335 SNARE associated Golgi protein JUNP479_3436 PF01476 LysM domain JUNP479_3436 PF01551 Peptidase family M23 JUNP479_3437 PF04539 Sigma-70 region 3 JUNP479_3437 PF04545 Sigma-70, region 4 JUNP479_3437 PF00140 Sigma-70 factor, region 1.2 JUNP479_3437 PF04542 Sigma-70 region 2 JUNP479_3438 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JUNP479_3440 PF04480 Protein of unknown function (DUF559) JUNP479_3441 PF03466 LysR substrate binding domain JUNP479_3441 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_3442 PF04371 Porphyromonas-type peptidyl-arginine deiminase JUNP479_3443 PF01425 Amidase JUNP479_3446 PF00753 Metallo-beta-lactamase superfamily JUNP479_3447 PF00939 Sodium:sulfate symporter transmembrane region JUNP479_3449 PF00270 DEAD/DEAH box helicase JUNP479_3449 PF00271 Helicase conserved C-terminal domain JUNP479_3450 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_3452 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase JUNP479_3454 PF00445 Ribonuclease T2 family JUNP479_3455 PF03060 Nitronate monooxygenase JUNP479_3460 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain JUNP479_3460 PF09297 NADH pyrophosphatase zinc ribbon domain JUNP479_3460 PF00293 NUDIX domain JUNP479_3462 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_3462 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_3463 PF00072 Response regulator receiver domain JUNP479_3463 PF00486 Transcriptional regulatory protein, C terminal JUNP479_3467 PF03710 Glutamate-ammonia ligase adenylyltransferase JUNP479_3467 PF08335 GlnD PII-uridylyltransferase JUNP479_3469 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_3469 PF02743 Cache domain JUNP479_3469 PF00672 HAMP domain JUNP479_3470 PF00520 Ion transport protein JUNP479_3470 PF00027 Cyclic nucleotide-binding domain JUNP479_3471 PF08239 Bacterial SH3 domain JUNP479_3472 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JUNP479_3472 PF01619 Proline dehydrogenase JUNP479_3472 PF14850 DNA-binding domain of Proline dehydrogenase JUNP479_3472 PF00171 Aldehyde dehydrogenase family JUNP479_3474 PF00293 NUDIX domain JUNP479_3474 PF09297 NADH pyrophosphatase zinc ribbon domain JUNP479_3475 PF01208 Uroporphyrinogen decarboxylase (URO-D) JUNP479_3476 PF00480 ROK family JUNP479_3477 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JUNP479_3477 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JUNP479_3478 PF00162 Phosphoglycerate kinase JUNP479_3479 PF01116 Fructose-bisphosphate aldolase class-II JUNP479_3480 PF01266 FAD dependent oxidoreductase JUNP479_3484 PF11412 Disulphide bond corrector protein DsbC JUNP479_3484 PF02683 Cytochrome C biogenesis protein transmembrane region JUNP479_3485 PF03091 CutA1 divalent ion tolerance protein JUNP479_3488 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_3488 PF03466 LysR substrate binding domain JUNP479_3490 PF03937 Flavinator of succinate dehydrogenase JUNP479_3492 PF00890 FAD binding domain JUNP479_3492 PF02910 Fumarate reductase flavoprotein C-term JUNP479_3493 PF04542 Sigma-70 region 2 JUNP479_3493 PF08281 Sigma-70, region 4 JUNP479_3494 PF03873 Anti sigma-E protein RseA, C-terminal domain JUNP479_3494 PF03872 Anti sigma-E protein RseA, N-terminal domain JUNP479_3495 PF17188 MucB/RseB C-terminal domain JUNP479_3495 PF03888 MucB/RseB N-terminal domain JUNP479_3497 PF00679 Elongation factor G C-terminus JUNP479_3497 PF03144 Elongation factor Tu domain 2 JUNP479_3497 PF06421 GTP-binding protein LepA C-terminus JUNP479_3497 PF00009 Elongation factor Tu GTP binding domain JUNP479_3498 PF10502 Signal peptidase, peptidase S26 JUNP479_3499 PF14622 Ribonuclease-III-like JUNP479_3499 PF00035 Double-stranded RNA binding motif JUNP479_3500 PF01926 50S ribosome-binding GTPase JUNP479_3500 PF07650 KH domain JUNP479_3501 PF02565 Recombination protein O C terminal JUNP479_3501 PF11967 Recombination protein O N terminal JUNP479_3502 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JUNP479_3503 PF00155 Aminotransferase class I and II JUNP479_3504 PF02378 Phosphotransferase system, EIIC JUNP479_3504 PF00367 phosphotransferase system, EIIB JUNP479_3505 PF01116 Fructose-bisphosphate aldolase class-II JUNP479_3506 PF01979 Amidohydrolase family JUNP479_3507 PF03610 PTS system fructose IIA component JUNP479_3508 PF03613 PTS system mannose/fructose/sorbose family IID component JUNP479_3509 PF03609 PTS system sorbose-specific iic component JUNP479_3510 PF03830 PTS system sorbose subfamily IIB component JUNP479_3511 PF01380 SIS domain JUNP479_3512 PF08013 Tagatose 6 phosphate kinase JUNP479_3513 PF08220 DeoR-like helix-turn-helix domain JUNP479_3513 PF00455 DeoR C terminal sensor domain JUNP479_3514 PF00459 Inositol monophosphatase family JUNP479_3515 PF03795 YCII-related domain JUNP479_3516 PF04279 Intracellular septation protein A JUNP479_3517 PF00282 Pyridoxal-dependent decarboxylase conserved domain JUNP479_3518 PF03006 Haemolysin-III related JUNP479_3519 PF02080 TrkA-C domain JUNP479_3519 PF06826 Predicted Permease Membrane Region JUNP479_3522 PF03707 Bacterial signalling protein N terminal repeat JUNP479_3522 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_3522 PF00563 EAL domain JUNP479_3523 PF06877 Regulator of ribonuclease activity B JUNP479_3526 PF00561 alpha/beta hydrolase fold JUNP479_3527 PF00109 Beta-ketoacyl synthase, N-terminal domain JUNP479_3527 PF02801 Beta-ketoacyl synthase, C-terminal domain JUNP479_3529 PF07977 FabA-like domain JUNP479_3530 PF00109 Beta-ketoacyl synthase, N-terminal domain JUNP479_3530 PF02801 Beta-ketoacyl synthase, C-terminal domain JUNP479_3535 PF00221 Aromatic amino acid lyase JUNP479_3537 PF07977 FabA-like domain JUNP479_3538 PF13193 AMP-binding enzyme C-terminal domain JUNP479_3538 PF00501 AMP-binding enzyme JUNP479_3540 PF00550 Phosphopantetheine attachment site JUNP479_3541 PF00550 Phosphopantetheine attachment site JUNP479_3547 PF04227 Indigoidine synthase A like protein JUNP479_3548 PF00294 pfkB family carbohydrate kinase JUNP479_3551 PF00582 Universal stress protein family JUNP479_3553 PF00267 Gram-negative porin JUNP479_3554 PF08241 Methyltransferase domain JUNP479_3555 PF13545 Crp-like helix-turn-helix domain JUNP479_3555 PF00027 Cyclic nucleotide-binding domain JUNP479_3556 PF02566 OsmC-like protein JUNP479_3559 PF00485 Phosphoribulokinase / Uridine kinase family JUNP479_3560 PF06794 Uncharacterised protein family (UPF0270) JUNP479_3561 PF00563 EAL domain JUNP479_3561 PF01590 GAF domain JUNP479_3561 PF00360 Phytochrome region JUNP479_3561 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_3562 PF00561 alpha/beta hydrolase fold JUNP479_3563 PF01584 CheW-like domain JUNP479_3563 PF00072 Response regulator receiver domain JUNP479_3565 PF09526 Probable metal-binding protein (DUF2387) JUNP479_3566 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JUNP479_3567 PF04102 SlyX JUNP479_3569 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JUNP479_3569 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JUNP479_3570 PF02954 Bacterial regulatory protein, Fis family JUNP479_3570 PF00072 Response regulator receiver domain JUNP479_3570 PF00158 Sigma-54 interaction domain JUNP479_3574 PF00149 Calcineurin-like phosphoesterase JUNP479_3574 PF02872 5'-nucleotidase, C-terminal domain JUNP479_3576 PF03796 DnaB-like helicase C terminal domain JUNP479_3576 PF00772 DnaB-like helicase N terminal domain JUNP479_3577 PF01168 Alanine racemase, N-terminal domain JUNP479_3577 PF00842 Alanine racemase, C-terminal domain JUNP479_3578 PF01894 Uncharacterised protein family UPF0047 JUNP479_3579 PF03575 Peptidase family S51 JUNP479_3580 PF02554 Carbon starvation protein CstA JUNP479_3580 PF13722 5TM C-terminal transporter carbon starvation CstA JUNP479_3582 PF00072 Response regulator receiver domain JUNP479_3582 PF04397 LytTr DNA-binding domain JUNP479_3583 PF06580 Histidine kinase JUNP479_3583 PF07694 5TMR of 5TMR-LYT JUNP479_3585 PF00005 ABC transporter JUNP479_3586 PF01032 FecCD transport family JUNP479_3588 PF06228 Haem utilisation ChuX/HutX JUNP479_3589 PF01243 Pyridoxamine 5'-phosphate oxidase JUNP479_3593 PF00593 TonB dependent receptor JUNP479_3593 PF07715 TonB-dependent Receptor Plug Domain JUNP479_3594 PF00196 Bacterial regulatory proteins, luxR family JUNP479_3594 PF03472 Autoinducer binding domain JUNP479_3595 PF05638 Type VI secretion system effector, Hcp JUNP479_3596 PF05638 Type VI secretion system effector, Hcp JUNP479_3597 PF04717 Type VI secretion system, phage-baseplate injector JUNP479_3598 PF04717 Type VI secretion system, phage-baseplate injector JUNP479_3599 PF04717 Type VI secretion system, phage-baseplate injector JUNP479_3602 PF00182 Chitinase class I JUNP479_3604 PF12832 MFS_1 like family JUNP479_3606 PF13443 Cro/C1-type HTH DNA-binding domain JUNP479_3608 PF00672 HAMP domain JUNP479_3608 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JUNP479_3608 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_3608 PF01627 Hpt domain JUNP479_3608 PF00072 Response regulator receiver domain JUNP479_3608 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_3609 PF08329 Chitinase A, N-terminal domain JUNP479_3609 PF00704 Glycosyl hydrolases family 18 JUNP479_3610 PF17945 Beta/Gamma crystallin JUNP479_3610 PF12561 ToxR activated gene A lipoprotein domain JUNP479_3611 PF18416 N-acetylglucosamine binding protein domain 2 JUNP479_3611 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JUNP479_3619 PF06483 Chitinase C JUNP479_3619 PF00704 Glycosyl hydrolases family 18 JUNP479_3620 PF00072 Response regulator receiver domain JUNP479_3620 PF01584 CheW-like domain JUNP479_3621 PF13472 GDSL-like Lipase/Acylhydrolase family JUNP479_3622 PF00005 ABC transporter JUNP479_3624 PF01370 NAD dependent epimerase/dehydratase family JUNP479_3624 PF08338 Domain of unknown function (DUF1731) JUNP479_3625 PF12792 CSS motif domain associated with EAL JUNP479_3625 PF00563 EAL domain JUNP479_3626 PF00155 Aminotransferase class I and II JUNP479_3628 PF02390 Putative methyltransferase JUNP479_3629 PF04320 Protein with unknown function (DUF469) JUNP479_3630 PF04960 Glutaminase JUNP479_3631 PF00581 Rhodanese-like domain JUNP479_3632 PF06004 Bacterial protein of unknown function (DUF903) JUNP479_3634 PF00994 Probable molybdopterin binding domain JUNP479_3636 PF06738 Putative threonine/serine exporter JUNP479_3637 PF12821 Threonine/Serine exporter, ThrE JUNP479_3638 PF00186 Dihydrofolate reductase JUNP479_3639 PF01507 Phosphoadenosine phosphosulfate reductase family JUNP479_3640 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JUNP479_3640 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JUNP479_3641 PF00667 FAD binding domain JUNP479_3641 PF00258 Flavodoxin JUNP479_3641 PF00175 Oxidoreductase NAD-binding domain JUNP479_3642 PF00152 tRNA synthetases class II (D, K and N) JUNP479_3642 PF01336 OB-fold nucleic acid binding domain JUNP479_3643 PF03462 PCRF domain JUNP479_3643 PF00472 RF-1 domain JUNP479_3645 PF00672 HAMP domain JUNP479_3645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_3645 PF02743 Cache domain JUNP479_3646 PF03616 Sodium/glutamate symporter JUNP479_3647 PF00710 Asparaginase, N-terminal JUNP479_3647 PF17763 Glutaminase/Asparaginase C-terminal domain JUNP479_3648 PF07023 Protein of unknown function (DUF1315) JUNP479_3649 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JUNP479_3649 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JUNP479_3652 PF04055 Radical SAM superfamily JUNP479_3652 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JUNP479_3653 PF03099 Biotin/lipoate A/B protein ligase family JUNP479_3654 PF04359 Protein of unknown function (DUF493) JUNP479_3655 PF07943 Penicillin-binding protein 5, C-terminal domain JUNP479_3655 PF00768 D-alanyl-D-alanine carboxypeptidase JUNP479_3656 PF05036 Sporulation related domain JUNP479_3656 PF03330 Lytic transglycolase JUNP479_3657 PF13406 Transglycosylase SLT domain JUNP479_3658 PF01098 Cell cycle protein JUNP479_3659 PF03717 Penicillin-binding Protein dimerisation domain JUNP479_3659 PF00905 Penicillin binding protein transpeptidase domain JUNP479_3660 PF02590 Predicted SPOUT methyltransferase JUNP479_3662 PF01467 Cytidylyltransferase-like JUNP479_3665 PF00133 tRNA synthetases class I (I, L, M and V) JUNP479_3665 PF08264 Anticodon-binding domain of tRNA JUNP479_3665 PF13603 Leucyl-tRNA synthetase, Domain 2 JUNP479_3666 PF07295 Zinc-ribbon containing domain JUNP479_3667 PF02463 RecF/RecN/SMC N terminal domain JUNP479_3668 PF01523 Putative modulator of DNA gyrase JUNP479_3669 PF01523 Putative modulator of DNA gyrase JUNP479_3670 PF00258 Flavodoxin JUNP479_3671 PF02899 Phage integrase, N-terminal SAM-like domain JUNP479_3671 PF00589 Phage integrase family JUNP479_3672 PF01741 Large-conductance mechanosensitive channel, MscL JUNP479_3674 PF01368 DHH family JUNP479_3674 PF02272 DHHA1 domain JUNP479_3674 PF17768 RecJ OB domain JUNP479_3675 PF00795 Carbon-nitrogen hydrolase JUNP479_3676 PF03471 Transporter associated domain JUNP479_3676 PF00571 CBS domain JUNP479_3677 PF02130 Uncharacterized protein family UPF0054 JUNP479_3678 PF02562 PhoH-like protein JUNP479_3679 PF04055 Radical SAM superfamily JUNP479_3679 PF01938 TRAM domain JUNP479_3679 PF00919 Uncharacterized protein family UPF0004 JUNP479_3680 PF01494 FAD binding domain JUNP479_3681 PF00857 Isochorismatase family JUNP479_3683 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_3684 PF03466 LysR substrate binding domain JUNP479_3684 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_3686 PF13419 Haloacid dehalogenase-like hydrolase JUNP479_3688 PF03606 C4-dicarboxylate anaerobic carrier JUNP479_3689 PF01156 Inosine-uridine preferring nucleoside hydrolase JUNP479_3690 PF13382 Adenine deaminase C-terminal domain JUNP479_3690 PF01979 Amidohydrolase family JUNP479_3691 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_3691 PF03466 LysR substrate binding domain JUNP479_3693 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JUNP479_3693 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JUNP479_3695 PF01132 Elongation factor P (EF-P) OB domain JUNP479_3695 PF08207 Elongation factor P (EF-P) KOW-like domain JUNP479_3695 PF09285 Elongation factor P, C-terminal JUNP479_3697 PF00478 IMP dehydrogenase / GMP reductase domain JUNP479_3699 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_3699 PF08521 Two-component sensor kinase N-terminal JUNP479_3699 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_3700 PF00486 Transcriptional regulatory protein, C terminal JUNP479_3700 PF00072 Response regulator receiver domain JUNP479_3704 PF00501 AMP-binding enzyme JUNP479_3704 PF13193 AMP-binding enzyme C-terminal domain JUNP479_3706 PF13649 Methyltransferase domain JUNP479_3707 PF01266 FAD dependent oxidoreductase JUNP479_3709 PF17932 Tetracyclin repressor-like, C-terminal domain JUNP479_3709 PF00440 Bacterial regulatory proteins, tetR family JUNP479_3710 PF06224 Winged helix DNA-binding domain JUNP479_3712 PF07687 Peptidase dimerisation domain JUNP479_3712 PF01546 Peptidase family M20/M25/M40 JUNP479_3713 PF07670 Nucleoside recognition JUNP479_3714 PF07670 Nucleoside recognition JUNP479_3715 PF02313 Fumarate reductase subunit D JUNP479_3716 PF02300 Fumarate reductase subunit C JUNP479_3717 PF13085 2Fe-2S iron-sulfur cluster binding domain JUNP479_3717 PF13183 4Fe-4S dicluster domain JUNP479_3718 PF02910 Fumarate reductase flavoprotein C-term JUNP479_3718 PF00890 FAD binding domain JUNP479_3719 PF02743 Cache domain JUNP479_3719 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_3719 PF00672 HAMP domain JUNP479_3720 PF03009 Glycerophosphoryl diester phosphodiesterase family JUNP479_3721 PF00924 Mechanosensitive ion channel JUNP479_3721 PF12795 Mechanosensitive ion channel porin domain JUNP479_3721 PF12794 Mechanosensitive ion channel inner membrane domain 1 JUNP479_3723 PF01476 LysM domain JUNP479_3723 PF08525 Opacity-associated protein A N-terminal motif JUNP479_3723 PF01551 Peptidase family M23 JUNP479_3725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_3725 PF03466 LysR substrate binding domain JUNP479_3728 PF02743 Cache domain JUNP479_3728 PF00672 HAMP domain JUNP479_3728 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_3729 PF03466 LysR substrate binding domain JUNP479_3729 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_3730 PF17092 Penicillin-binding protein OB-like domain JUNP479_3730 PF00905 Penicillin binding protein transpeptidase domain JUNP479_3730 PF00912 Transglycosylase JUNP479_3731 PF11104 Type IV pilus assembly protein PilM; JUNP479_3733 PF04350 Pilus assembly protein, PilO JUNP479_3735 PF00263 Bacterial type II and III secretion system protein JUNP479_3735 PF07660 Secretin and TonB N terminus short domain JUNP479_3735 PF03958 Bacterial type II/III secretion system short domain JUNP479_3735 PF11741 AMIN domain JUNP479_3736 PF01202 Shikimate kinase JUNP479_3737 PF01761 3-dehydroquinate synthase JUNP479_3739 PF02086 D12 class N6 adenine-specific DNA methyltransferase JUNP479_3740 PF00834 Ribulose-phosphate 3 epimerase family JUNP479_3741 PF13419 Haloacid dehalogenase-like hydrolase JUNP479_3742 PF00579 tRNA synthetases class I (W and Y) JUNP479_3744 PF00117 Glutamine amidotransferase class-I JUNP479_3745 PF00202 Aminotransferase class-III JUNP479_3746 PF04958 Arginine N-succinyltransferase beta subunit JUNP479_3747 PF00171 Aldehyde dehydrogenase family JUNP479_3750 PF13419 Haloacid dehalogenase-like hydrolase JUNP479_3751 PF07690 Major Facilitator Superfamily JUNP479_3752 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JUNP479_3752 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JUNP479_3752 PF10371 Domain of unknown function JUNP479_3752 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JUNP479_3752 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JUNP479_3753 PF16657 Maltogenic Amylase, C-terminal domain JUNP479_3753 PF00128 Alpha amylase, catalytic domain JUNP479_3755 PF07859 alpha/beta hydrolase fold JUNP479_3756 PF04266 ASCH domain JUNP479_3758 PF01048 Phosphorylase superfamily JUNP479_3759 PF04973 Nicotinamide mononucleotide transporter JUNP479_3760 PF03600 Citrate transporter JUNP479_3760 PF02080 TrkA-C domain JUNP479_3769 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_3769 PF03466 LysR substrate binding domain JUNP479_3770 PF13416 Bacterial extracellular solute-binding protein JUNP479_3771 PF08402 TOBE domain JUNP479_3771 PF00005 ABC transporter JUNP479_3772 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_3773 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_3774 PF00171 Aldehyde dehydrogenase family JUNP479_3775 PF06071 Protein of unknown function (DUF933) JUNP479_3775 PF01926 50S ribosome-binding GTPase JUNP479_3776 PF01195 Peptidyl-tRNA hydrolase JUNP479_3777 PF00149 Calcineurin-like phosphoesterase JUNP479_3777 PF02872 5'-nucleotidase, C-terminal domain JUNP479_3778 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JUNP479_3778 PF14572 Phosphoribosyl synthetase-associated domain JUNP479_3780 PF08544 GHMP kinases C terminal JUNP479_3780 PF00288 GHMP kinases N terminal domain JUNP479_3781 PF03550 Outer membrane lipoprotein LolB JUNP479_3782 PF01488 Shikimate / quinate 5-dehydrogenase JUNP479_3782 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JUNP479_3782 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JUNP479_3783 PF00472 RF-1 domain JUNP479_3783 PF03462 PCRF domain JUNP479_3784 PF17827 PrmC N-terminal domain JUNP479_3784 PF13847 Methyltransferase domain JUNP479_3786 PF13369 Transglutaminase-like superfamily JUNP479_3787 PF00793 DAHP synthetase I family JUNP479_3788 PF00375 Sodium:dicarboxylate symporter family JUNP479_3789 PF01228 Glycine radical JUNP479_3791 PF03167 Uracil DNA glycosylase superfamily JUNP479_3793 PF01204 Trehalase JUNP479_3795 PF01161 Phosphatidylethanolamine-binding protein JUNP479_3796 PF00709 Adenylosuccinate synthetase JUNP479_3799 PF00155 Aminotransferase class I and II JUNP479_3801 PF07690 Major Facilitator Superfamily JUNP479_3802 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_3802 PF03466 LysR substrate binding domain JUNP479_3803 PF00106 short chain dehydrogenase JUNP479_3804 PF01343 Peptidase family S49 JUNP479_3804 PF08496 Peptidase family S49 N-terminal JUNP479_3805 PF07690 Major Facilitator Superfamily JUNP479_3806 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_3807 PF02635 DsrE/DsrF-like family JUNP479_3809 PF12838 4Fe-4S dicluster domain JUNP479_3810 PF16325 Peptidase family U32 C-terminal domain JUNP479_3810 PF01136 Peptidase family U32 JUNP479_3811 PF00990 Diguanylate cyclase, GGDEF domain JUNP479_3811 PF00563 EAL domain JUNP479_3811 PF00989 PAS fold JUNP479_3811 PF01590 GAF domain JUNP479_3816 PF00072 Response regulator receiver domain JUNP479_3816 PF00196 Bacterial regulatory proteins, luxR family JUNP479_3817 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_3817 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JUNP479_3817 PF00072 Response regulator receiver domain JUNP479_3817 PF00672 HAMP domain JUNP479_3817 PF01627 Hpt domain JUNP479_3817 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_3822 PF04996 Succinylarginine dihydrolase JUNP479_3823 PF01751 Toprim domain JUNP479_3823 PF01396 Topoisomerase DNA binding C4 zinc finger JUNP479_3823 PF01131 DNA topoisomerase JUNP479_3823 PF08272 Topoisomerase I zinc-ribbon-like JUNP479_3826 PF00728 Glycosyl hydrolase family 20, catalytic domain JUNP479_3826 PF02838 Glycosyl hydrolase family 20, domain 2 JUNP479_3827 PF01869 BadF/BadG/BcrA/BcrD ATPase family JUNP479_3829 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JUNP479_3829 PF00005 ABC transporter JUNP479_3830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JUNP479_3830 PF00005 ABC transporter JUNP479_3831 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_3831 PF12911 N-terminal TM domain of oligopeptide transport permease C JUNP479_3832 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_3833 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JUNP479_3834 PF00072 Response regulator receiver domain JUNP479_3834 PF09308 LuxQ, periplasmic JUNP479_3834 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_3834 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_3838 PF10725 Protein of unknown function (DUF2517) JUNP479_3840 PF13426 PAS domain JUNP479_3840 PF08447 PAS fold JUNP479_3840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_3843 PF04632 Fusaric acid resistance protein family JUNP479_3844 PF03453 MoeA N-terminal region (domain I and II) JUNP479_3844 PF03454 MoeA C-terminal region (domain IV) JUNP479_3844 PF00994 Probable molybdopterin binding domain JUNP479_3845 PF12804 MobA-like NTP transferase domain JUNP479_3846 PF00005 ABC transporter JUNP479_3847 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_3848 PF12849 PBP superfamily domain JUNP479_3849 PF00158 Sigma-54 interaction domain JUNP479_3849 PF02954 Bacterial regulatory protein, Fis family JUNP479_3849 PF00072 Response regulator receiver domain JUNP479_3850 PF00989 PAS fold JUNP479_3850 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_3850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_3852 PF02634 FdhD/NarQ family JUNP479_3859 PF12838 4Fe-4S dicluster domain JUNP479_3859 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JUNP479_3859 PF01568 Molydopterin dinucleotide binding domain JUNP479_3859 PF12838 4Fe-4S dicluster domain JUNP479_3859 PF00384 Molybdopterin oxidoreductase JUNP479_3859 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JUNP479_3859 PF00384 Molybdopterin oxidoreductase JUNP479_3859 PF01568 Molydopterin dinucleotide binding domain JUNP479_3859 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JUNP479_3859 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JUNP479_3860 PF13247 4Fe-4S dicluster domain JUNP479_3862 PF00486 Transcriptional regulatory protein, C terminal JUNP479_3862 PF00072 Response regulator receiver domain JUNP479_3863 PF03949 Malic enzyme, NAD binding domain JUNP479_3863 PF00390 Malic enzyme, N-terminal domain JUNP479_3864 PF16998 17 kDa outer membrane surface antigen JUNP479_3864 PF05433 Glycine zipper 2TM domain JUNP479_3866 PF00860 Permease family JUNP479_3867 PF00497 Bacterial extracellular solute-binding proteins, family 3 JUNP479_3868 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_3868 PF00672 HAMP domain JUNP479_3873 PF02685 Glucokinase JUNP479_3874 PF01380 SIS domain JUNP479_3874 PF01418 Helix-turn-helix domain, rpiR family JUNP479_3875 PF00224 Pyruvate kinase, barrel domain JUNP479_3875 PF02887 Pyruvate kinase, alpha/beta domain JUNP479_3877 PF02049 Flagellar hook-basal body complex protein FliE JUNP479_3878 PF01514 Secretory protein of YscJ/FliF family JUNP479_3878 PF08345 Flagellar M-ring protein C-terminal JUNP479_3879 PF01706 FliG C-terminal domain JUNP479_3879 PF14841 FliG middle domain JUNP479_3879 PF14842 FliG N-terminal domain JUNP479_3881 PF18269 T3SS EscN ATPase C-terminal domain JUNP479_3881 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JUNP479_3885 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JUNP479_3885 PF02154 Flagellar motor switch protein FliM JUNP479_3886 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JUNP479_3887 PF04347 Flagellar biosynthesis protein, FliO JUNP479_3888 PF00813 FliP family JUNP479_3889 PF01313 Bacterial export proteins, family 3 JUNP479_3890 PF01311 Bacterial export proteins, family 1 JUNP479_3891 PF01312 FlhB HrpN YscU SpaS Family JUNP479_3892 PF00771 FHIPEP family JUNP479_3893 PF00448 SRP54-type protein, GTPase domain JUNP479_3894 PF10609 NUBPL iron-transfer P-loop NTPase JUNP479_3895 PF04545 Sigma-70, region 4 JUNP479_3895 PF04542 Sigma-70 region 2 JUNP479_3895 PF04539 Sigma-70 region 3 JUNP479_3896 PF00072 Response regulator receiver domain JUNP479_3897 PF04344 Chemotaxis phosphatase, CheZ JUNP479_3898 PF01584 CheW-like domain JUNP479_3898 PF02895 Signal transducing histidine kinase, homodimeric domain JUNP479_3898 PF00072 Response regulator receiver domain JUNP479_3898 PF01627 Hpt domain JUNP479_3898 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_3899 PF01339 CheB methylesterase JUNP479_3899 PF00072 Response regulator receiver domain JUNP479_3900 PF01618 MotA/TolQ/ExbB proton channel family JUNP479_3901 PF13677 Membrane MotB of proton-channel complex MotA/MotB JUNP479_3901 PF00691 OmpA family JUNP479_3902 PF13614 AAA domain JUNP479_3904 PF01584 CheW-like domain JUNP479_3906 PF00005 ABC transporter JUNP479_3907 PF03379 CcmB protein JUNP479_3908 PF01578 Cytochrome C assembly protein JUNP479_3909 PF04995 Heme exporter protein D (CcmD) JUNP479_3910 PF03100 CcmE JUNP479_3911 PF01578 Cytochrome C assembly protein JUNP479_3911 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JUNP479_3912 PF08534 Redoxin JUNP479_3913 PF03918 Cytochrome C biogenesis protein JUNP479_3914 PF03918 Cytochrome C biogenesis protein JUNP479_3915 PF04333 MlaA lipoprotein JUNP479_3916 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JUNP479_3916 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JUNP479_3917 PF00462 Glutaredoxin JUNP479_3918 PF00291 Pyridoxal-phosphate dependent enzyme JUNP479_3919 PF03222 Tryptophan/tyrosine permease family JUNP479_3920 PF00871 Acetokinase family JUNP479_3921 PF01228 Glycine radical JUNP479_3921 PF02901 Pyruvate formate lyase-like JUNP479_3922 PF01042 Endoribonuclease L-PSP JUNP479_3923 PF01029 NusB family JUNP479_3923 PF01189 16S rRNA methyltransferase RsmB/F JUNP479_3925 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JUNP479_3925 PF01243 Pyridoxamine 5'-phosphate oxidase JUNP479_3926 PF00043 Glutathione S-transferase, C-terminal domain JUNP479_3926 PF13417 Glutathione S-transferase, N-terminal domain JUNP479_3930 PF00294 pfkB family carbohydrate kinase JUNP479_3932 PF03747 ADP-ribosylglycohydrolase JUNP479_3934 PF01593 Flavin containing amine oxidoreductase JUNP479_3938 PF08007 Cupin superfamily protein JUNP479_3939 PF08328 Adenylosuccinate lyase C-terminal JUNP479_3939 PF00206 Lyase JUNP479_3940 PF04356 Protein of unknown function (DUF489) JUNP479_3942 PF00293 NUDIX domain JUNP479_3943 PF00849 RNA pseudouridylate synthase JUNP479_3945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JUNP479_3946 PF07690 Major Facilitator Superfamily JUNP479_3948 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JUNP479_3948 PF02378 Phosphotransferase system, EIIC JUNP479_3948 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JUNP479_3952 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JUNP479_3952 PF00356 Bacterial regulatory proteins, lacI family JUNP479_3953 PF02378 Phosphotransferase system, EIIC JUNP479_3953 PF00367 phosphotransferase system, EIIB JUNP479_3954 PF00155 Aminotransferase class I and II JUNP479_3957 PF01312 FlhB HrpN YscU SpaS Family JUNP479_3958 PF01311 Bacterial export proteins, family 1 JUNP479_3959 PF01313 Bacterial export proteins, family 3 JUNP479_3960 PF00813 FliP family JUNP479_3961 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JUNP479_3962 PF02120 Flagellar hook-length control protein FliK JUNP479_3964 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JUNP479_3964 PF02874 ATP synthase alpha/beta family, beta-barrel domain JUNP479_3964 PF18269 T3SS EscN ATPase C-terminal domain JUNP479_3965 PF07201 HrpJ-like domain JUNP479_3966 PF09059 TyeA JUNP479_3970 PF00771 FHIPEP family JUNP479_3971 PF09621 Type III secretion system regulator (LcrR) JUNP479_3973 PF04792 V antigen (LcrV) protein JUNP479_3974 PF07720 Tetratricopeptide repeat JUNP479_3975 PF04888 Secretion system effector C (SseC) like family JUNP479_3976 PF05844 YopD protein JUNP479_3977 PF05932 Tir chaperone protein (CesT) family JUNP479_3980 PF12833 Helix-turn-helix domain JUNP479_3981 PF16806 Antiactivator protein ExsD JUNP479_3982 PF05932 Tir chaperone protein (CesT) family JUNP479_3983 PF00263 Bacterial type II and III secretion system protein JUNP479_3983 PF03958 Bacterial type II/III secretion system short domain JUNP479_3984 PF16697 Inner membrane component of T3SS, cytoplasmic domain JUNP479_3984 PF16693 Inner membrane component of T3SS, periplasmic domain JUNP479_3986 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF JUNP479_3987 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) JUNP479_3988 PF09025 YopR, type III needle-polymerisation regulator JUNP479_3989 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI JUNP479_3990 PF01514 Secretory protein of YscJ/FliF family JUNP479_3991 PF06578 YOP proteins translocation protein K (YscK) JUNP479_3992 PF02108 Flagellar assembly protein FliH JUNP479_3995 PF02075 Crossover junction endodeoxyribonuclease RuvC JUNP479_3996 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JUNP479_3996 PF02770 Acyl-CoA dehydrogenase, middle domain JUNP479_3996 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JUNP479_3996 PF09317 Domain of unknown function (DUF1974) JUNP479_3997 PF00440 Bacterial regulatory proteins, tetR family JUNP479_4001 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JUNP479_4001 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JUNP479_4001 PF12838 4Fe-4S dicluster domain JUNP479_4001 PF01568 Molydopterin dinucleotide binding domain JUNP479_4001 PF00384 Molybdopterin oxidoreductase JUNP479_4002 PF00480 ROK family JUNP479_4003 PF13181 Tetratricopeptide repeat JUNP479_4003 PF17128 Domain of unknown function (DUF5107) JUNP479_4004 PF00083 Sugar (and other) transporter JUNP479_4007 PF01668 SmpB protein JUNP479_4008 PF03364 Polyketide cyclase / dehydrase and lipid transport JUNP479_4009 PF03658 RnfH family Ubiquitin JUNP479_4010 PF01546 Peptidase family M20/M25/M40 JUNP479_4010 PF07687 Peptidase dimerisation domain JUNP479_4011 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JUNP479_4011 PF09317 Domain of unknown function (DUF1974) JUNP479_4011 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JUNP479_4011 PF02770 Acyl-CoA dehydrogenase, middle domain JUNP479_4013 PF13580 SIS domain JUNP479_4014 PF13230 Glutamine amidotransferases class-II JUNP479_4016 PF01933 Uncharacterised protein family UPF0052 JUNP479_4018 PF17149 Periplasmic sensor domain found in signal transduction proteins JUNP479_4018 PF00672 HAMP domain JUNP479_4018 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_4018 PF01627 Hpt domain JUNP479_4018 PF00072 Response regulator receiver domain JUNP479_4018 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_4020 PF00072 Response regulator receiver domain JUNP479_4020 PF00196 Bacterial regulatory proteins, luxR family JUNP479_4021 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JUNP479_4021 PF00672 HAMP domain JUNP479_4021 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_4021 PF07730 Histidine kinase JUNP479_4022 PF04055 Radical SAM superfamily JUNP479_4022 PF06463 Molybdenum Cofactor Synthesis C JUNP479_4023 PF13187 4Fe-4S dicluster domain JUNP479_4023 PF12800 4Fe-4S binding domain JUNP479_4023 PF00037 4Fe-4S binding domain JUNP479_4025 PF00384 Molybdopterin oxidoreductase JUNP479_4025 PF01568 Molydopterin dinucleotide binding domain JUNP479_4025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JUNP479_4025 PF10518 TAT (twin-arginine translocation) pathway signal sequence JUNP479_4026 PF12838 4Fe-4S dicluster domain JUNP479_4026 PF12800 4Fe-4S binding domain JUNP479_4027 PF13237 4Fe-4S dicluster domain JUNP479_4027 PF12801 4Fe-4S binding domain JUNP479_4028 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) JUNP479_4029 PF03264 NapC/NirT cytochrome c family, N-terminal region JUNP479_4030 PF00994 Probable molybdopterin binding domain JUNP479_4031 PF01967 MoaC family JUNP479_4032 PF02597 ThiS family JUNP479_4033 PF02391 MoaE protein JUNP479_4035 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_4036 PF03459 TOBE domain JUNP479_4036 PF00005 ABC transporter JUNP479_4037 PF00561 alpha/beta hydrolase fold JUNP479_4038 PF06406 StbA protein JUNP479_4040 PF00899 ThiF family JUNP479_4041 PF03453 MoeA N-terminal region (domain I and II) JUNP479_4041 PF03454 MoeA C-terminal region (domain IV) JUNP479_4041 PF00994 Probable molybdopterin binding domain JUNP479_4042 PF01227 GTP cyclohydrolase I JUNP479_4043 PF00672 HAMP domain JUNP479_4043 PF17200 Single Cache domain 2 JUNP479_4043 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_4044 PF01268 Formate--tetrahydrofolate ligase JUNP479_4046 PF03466 LysR substrate binding domain JUNP479_4046 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_4047 PF04264 YceI-like domain JUNP479_4052 PF01546 Peptidase family M20/M25/M40 JUNP479_4052 PF07687 Peptidase dimerisation domain JUNP479_4053 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JUNP479_4053 PF17810 Arginine decarboxylase helical bundle domain JUNP479_4053 PF17944 Arginine decarboxylase C-terminal helical extension JUNP479_4057 PF12729 Four helix bundle sensory module for signal transduction JUNP479_4057 PF00672 HAMP domain JUNP479_4057 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_4059 PF01042 Endoribonuclease L-PSP JUNP479_4060 PF03313 Serine dehydratase alpha chain JUNP479_4061 PF08348 YheO-like PAS domain JUNP479_4061 PF13309 HTH domain JUNP479_4062 PF00300 Histidine phosphatase superfamily (branch 1) JUNP479_4064 PF13407 Periplasmic binding protein domain JUNP479_4065 PF12241 Trans-2-enoyl-CoA reductase catalytic region JUNP479_4065 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JUNP479_4065 PF07055 Enoyl reductase FAD binding domain JUNP479_4066 PF03606 C4-dicarboxylate anaerobic carrier JUNP479_4067 PF00155 Aminotransferase class I and II JUNP479_4069 PF00230 Major intrinsic protein JUNP479_4070 PF10145 Phage-related minor tail protein JUNP479_4070 PF01551 Peptidase family M23 JUNP479_4070 PF01464 Transglycosylase SLT domain JUNP479_4073 PF13091 PLD-like domain JUNP479_4073 PF13396 Phospholipase_D-nuclease N-terminal JUNP479_4075 PF00551 Formyl transferase JUNP479_4075 PF01842 ACT domain JUNP479_4077 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JUNP479_4079 PF00085 Thioredoxin JUNP479_4080 PF01648 4'-phosphopantetheinyl transferase superfamily JUNP479_4081 PF00877 NlpC/P60 family JUNP479_4082 PF05971 RNA methyltransferase JUNP479_4083 PF01575 MaoC like domain JUNP479_4084 PF00939 Sodium:sulfate symporter transmembrane region JUNP479_4086 PF03734 L,D-transpeptidase catalytic domain JUNP479_4086 PF01476 LysM domain JUNP479_4086 PF17969 L,D-transpeptidase C-terminal domain JUNP479_4088 PF00873 AcrB/AcrD/AcrF family JUNP479_4089 PF00529 HlyD membrane-fusion protein of T1SS JUNP479_4089 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JUNP479_4090 PF00486 Transcriptional regulatory protein, C terminal JUNP479_4090 PF00072 Response regulator receiver domain JUNP479_4091 PF00672 HAMP domain JUNP479_4091 PF00512 His Kinase A (phospho-acceptor) domain JUNP479_4091 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JUNP479_4092 PF04434 SWIM zinc finger JUNP479_4092 PF00176 SNF2 family N-terminal domain JUNP479_4092 PF00271 Helicase conserved C-terminal domain JUNP479_4093 PF05472 DNA replication terminus site-binding protein (Ter protein) JUNP479_4095 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JUNP479_4097 PF01464 Transglycosylase SLT domain JUNP479_4097 PF01476 LysM domain JUNP479_4098 PF00753 Metallo-beta-lactamase superfamily JUNP479_4098 PF16123 Hydroxyacylglutathione hydrolase C-terminus JUNP479_4099 PF08241 Methyltransferase domain JUNP479_4100 PF00075 RNase H JUNP479_4101 PF00929 Exonuclease JUNP479_4103 PF11849 Domain of unknown function (DUF3369) JUNP479_4104 PF08021 Siderophore-interacting FAD-binding domain JUNP479_4104 PF04954 Siderophore-interacting protein JUNP479_4105 PF01032 FecCD transport family JUNP479_4106 PF01032 FecCD transport family JUNP479_4107 PF00005 ABC transporter JUNP479_4108 PF01497 Periplasmic binding protein JUNP479_4110 PF00873 AcrB/AcrD/AcrF family JUNP479_4111 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JUNP479_4111 PF00529 HlyD membrane-fusion protein of T1SS JUNP479_4113 PF00873 AcrB/AcrD/AcrF family JUNP479_4114 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JUNP479_4115 PF00005 ABC transporter JUNP479_4116 PF00005 ABC transporter JUNP479_4120 PF03372 Endonuclease/Exonuclease/phosphatase family JUNP479_4123 PF02424 ApbE family JUNP479_4124 PF00127 Copper binding proteins, plastocyanin/azurin family JUNP479_4126 PF04337 Protein of unknown function, DUF480 JUNP479_4127 PF04325 Protein of unknown function (DUF465) JUNP479_4129 PF01554 MatE JUNP479_4130 PF01740 STAS domain JUNP479_4130 PF00916 Sulfate permease family JUNP479_4133 PF00465 Iron-containing alcohol dehydrogenase JUNP479_4135 PF00440 Bacterial regulatory proteins, tetR family JUNP479_4135 PF08359 YsiA-like protein, C-terminal region JUNP479_4136 PF00171 Aldehyde dehydrogenase family JUNP479_4138 PF01156 Inosine-uridine preferring nucleoside hydrolase JUNP479_4140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JUNP479_4140 PF00034 Cytochrome c JUNP479_4142 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JUNP479_4142 PF06481 COX Aromatic Rich Motif JUNP479_4143 PF00115 Cytochrome C and Quinol oxidase polypeptide I JUNP479_4144 PF00510 Cytochrome c oxidase subunit III JUNP479_4145 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JUNP479_4146 PF01040 UbiA prenyltransferase family JUNP479_4147 PF07690 Major Facilitator Superfamily JUNP479_4148 PF05656 Protein of unknown function (DUF805) JUNP479_4154 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_4154 PF00672 HAMP domain JUNP479_4156 PF01238 Phosphomannose isomerase type I JUNP479_4157 PF12833 Helix-turn-helix domain JUNP479_4158 PF00180 Isocitrate/isopropylmalate dehydrogenase JUNP479_4159 PF00291 Pyridoxal-phosphate dependent enzyme JUNP479_4160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_4160 PF03466 LysR substrate binding domain JUNP479_4161 PF03466 LysR substrate binding domain JUNP479_4161 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_4163 PF00877 NlpC/P60 family JUNP479_4164 PF03466 LysR substrate binding domain JUNP479_4164 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_4165 PF00578 AhpC/TSA family JUNP479_4165 PF10417 C-terminal domain of 1-Cys peroxiredoxin JUNP479_4169 PF08003 Protein of unknown function (DUF1698) JUNP479_4170 PF13649 Methyltransferase domain JUNP479_4171 PF01904 Protein of unknown function DUF72 JUNP479_4173 PF01336 OB-fold nucleic acid binding domain JUNP479_4173 PF02938 GAD domain JUNP479_4173 PF00152 tRNA synthetases class II (D, K and N) JUNP479_4174 PF01709 Transcriptional regulator JUNP479_4175 PF00465 Iron-containing alcohol dehydrogenase JUNP479_4175 PF00171 Aldehyde dehydrogenase family JUNP479_4176 PF01914 MarC family integral membrane protein JUNP479_4177 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JUNP479_4178 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_4179 PF12911 N-terminal TM domain of oligopeptide transport permease C JUNP479_4179 PF00528 Binding-protein-dependent transport system inner membrane component JUNP479_4180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JUNP479_4180 PF00005 ABC transporter JUNP479_4181 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JUNP479_4181 PF00005 ABC transporter JUNP479_4182 PF03741 Integral membrane protein TerC family JUNP479_4183 PF01168 Alanine racemase, N-terminal domain JUNP479_4183 PF00842 Alanine racemase, C-terminal domain JUNP479_4185 PF00437 Type II/IV secretion system protein JUNP479_4188 PF01032 FecCD transport family JUNP479_4189 PF00005 ABC transporter JUNP479_4190 PF00793 DAHP synthetase I family JUNP479_4191 PF01219 Prokaryotic diacylglycerol kinase JUNP479_4192 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JUNP479_4192 PF01842 ACT domain JUNP479_4192 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JUNP479_4193 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JUNP479_4194 PF01812 5-formyltetrahydrofolate cyclo-ligase family JUNP479_4196 PF05173 Dihydrodipicolinate reductase, C-terminus JUNP479_4196 PF01113 Dihydrodipicolinate reductase, N-terminus JUNP479_4197 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JUNP479_4197 PF00117 Glutamine amidotransferase class-I JUNP479_4198 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JUNP479_4198 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JUNP479_4198 PF02142 MGS-like domain JUNP479_4201 PF07759 Protein of unknown function (DUF1615) JUNP479_4202 PF08378 Nuclease-related domain JUNP479_4204 PF00141 Peroxidase JUNP479_4206 PF00691 OmpA family JUNP479_4206 PF18393 MotY N-terminal domain JUNP479_4207 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JUNP479_4208 PF00633 Helix-hairpin-helix motif JUNP479_4208 PF10576 Iron-sulfur binding domain of endonuclease III JUNP479_4208 PF00730 HhH-GPD superfamily base excision DNA repair protein JUNP479_4209 PF02508 Rnf-Nqr subunit, membrane protein JUNP479_4210 PF04205 FMN-binding domain JUNP479_4211 PF03116 NQR2, RnfD, RnfE family JUNP479_4212 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JUNP479_4212 PF12838 4Fe-4S dicluster domain JUNP479_4212 PF13375 RnfC Barrel sandwich hybrid domain JUNP479_4212 PF10531 SLBB domain JUNP479_4213 PF04060 Putative Fe-S cluster JUNP479_4214 PF02508 Rnf-Nqr subunit, membrane protein JUNP479_4216 PF00145 C-5 cytosine-specific DNA methylase JUNP479_4216 PF18284 DNA methylase N-terminal domain JUNP479_4219 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JUNP479_4220 PF01479 S4 domain JUNP479_4220 PF00849 RNA pseudouridylate synthase JUNP479_4222 PF07690 Major Facilitator Superfamily JUNP479_4224 PF03466 LysR substrate binding domain JUNP479_4224 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_4225 PF10689 Protein of unknown function (DUF2496) JUNP479_4226 PF03061 Thioesterase superfamily JUNP479_4227 PF04391 Protein of unknown function (DUF533) JUNP479_4228 PF00392 Bacterial regulatory proteins, gntR family JUNP479_4228 PF00155 Aminotransferase class I and II JUNP479_4229 PF01654 Cytochrome bd terminal oxidase subunit I JUNP479_4230 PF02322 Cytochrome bd terminal oxidase subunit II JUNP479_4233 PF05114 Protein of unknown function (DUF692) JUNP479_4236 PF02525 Flavodoxin-like fold JUNP479_4237 PF07690 Major Facilitator Superfamily JUNP479_4238 PF00248 Aldo/keto reductase family JUNP479_4242 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_4242 PF03466 LysR substrate binding domain JUNP479_4244 PF00672 HAMP domain JUNP479_4244 PF02743 Cache domain JUNP479_4244 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JUNP479_4245 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JUNP479_4245 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JUNP479_4246 PF00230 Major intrinsic protein JUNP479_4247 PF07690 Major Facilitator Superfamily JUNP479_4248 PF00455 DeoR C terminal sensor domain JUNP479_4248 PF08220 DeoR-like helix-turn-helix domain JUNP479_4250 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JUNP479_4250 PF01266 FAD dependent oxidoreductase JUNP479_4251 PF03009 Glycerophosphoryl diester phosphodiesterase family JUNP479_4252 PF03974 Ecotin JUNP479_4253 PF04219 Protein of unknown function, DUF JUNP479_4254 PF03466 LysR substrate binding domain JUNP479_4254 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JUNP479_4256 PF00155 Aminotransferase class I and II JUNP479_4259 PF03772 Competence protein JUNP479_4259 PF00753 Metallo-beta-lactamase superfamily JUNP479_4260 PF00664 ABC transporter transmembrane region JUNP479_4260 PF00005 ABC transporter JUNP479_4261 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JUNP479_4262 PF03966 Trm112p-like protein JUNP479_4263 PF02348 Cytidylyltransferase JUNP479_4264 PF00072 Response regulator receiver domain JUNP479_4264 PF00196 Bacterial regulatory proteins, luxR family JUNP479_4265 PF01541 GIY-YIG catalytic domain JUNP479_4265 PF08459 UvrC Helix-hairpin-helix N-terminal JUNP479_4265 PF02151 UvrB/uvrC motif JUNP479_4266 PF01066 CDP-alcohol phosphatidyltransferase JUNP479_4285 PF01258 Prokaryotic dksA/traR C4-type zinc finger JUNP479_4296 PF13154 Protein of unknown function (DUF3991) JUNP479_4296 PF01076 Plasmid recombination enzyme JUNP479_4301 PF13614 AAA domain JUNP479_4301 PF00376 MerR family regulatory protein