locus-tag class description E4187_00005 PF00308 Bacterial dnaA protein E4187_00005 PF08299 Bacterial dnaA protein helix-turn-helix E4187_00005 PF11638 DnaA N-terminal domain E4187_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain E4187_00010 PF02767 DNA polymerase III beta subunit, central domain E4187_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain E4187_00015 PF02463 RecF/RecN/SMC N terminal domain E4187_00020 PF01751 Toprim domain E4187_00020 PF18053 DNA gyrase B subunit insert domain E4187_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_00020 PF00204 DNA gyrase B E4187_00020 PF00986 DNA gyrase B subunit, carboxyl terminus E4187_00030 PF13280 WYL domain E4187_00030 PF08279 HTH domain E4187_00040 PF12706 Beta-lactamase superfamily domain E4187_00045 PF00011 Hsp20/alpha crystallin family E4187_00050 PF00011 Hsp20/alpha crystallin family E4187_00055 PF00155 Aminotransferase class I and II E4187_00070 PF07690 Major Facilitator Superfamily E4187_00075 PF00486 Transcriptional regulatory protein, C terminal E4187_00075 PF00072 Response regulator receiver domain E4187_00080 PF00512 His Kinase A (phospho-acceptor) domain E4187_00080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_00080 PF13492 GAF domain E4187_00080 PF13493 Domain of unknown function (DUF4118) E4187_00080 PF02702 Osmosensitive K+ channel His kinase sensor domain E4187_00085 PF02669 K+-transporting ATPase, c chain E4187_00095 PF03814 Potassium-transporting ATPase A subunit E4187_00105 PF01638 HxlR-like helix-turn-helix E4187_00110 PF12146 Serine aminopeptidase, S33 E4187_00115 PF00107 Zinc-binding dehydrogenase E4187_00115 PF08240 Alcohol dehydrogenase GroES-like domain E4187_00125 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4187_00125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4187_00130 PF00512 His Kinase A (phospho-acceptor) domain E4187_00130 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4187_00130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_00135 PF00873 AcrB/AcrD/AcrF family E4187_00140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4187_00145 PF00440 Bacterial regulatory proteins, tetR family E4187_00180 PF12146 Serine aminopeptidase, S33 E4187_00185 PF12105 SpoU, rRNA methylase, C-terminal E4187_00185 PF00588 SpoU rRNA Methylase family E4187_00190 PF13291 ACT domain E4187_00190 PF04607 Region found in RelA / SpoT proteins E4187_00190 PF02824 TGS domain E4187_00195 PF01192 RNA polymerase Rpb6 E4187_00200 PF00625 Guanylate kinase E4187_00210 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E4187_00225 PF00892 EamA-like transporter family E4187_00245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_00245 PF03466 LysR substrate binding domain E4187_00250 PF00579 tRNA synthetases class I (W and Y) E4187_00255 PF00582 Universal stress protein family E4187_00260 PF07055 Enoyl reductase FAD binding domain E4187_00260 PF12241 Trans-2-enoyl-CoA reductase catalytic region E4187_00260 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase E4187_00265 PF00990 Diguanylate cyclase, GGDEF domain E4187_00265 PF05230 MASE2 domain E4187_00270 PF00210 Ferritin-like domain E4187_00280 PF07690 Major Facilitator Superfamily E4187_00285 PF01810 LysE type translocator E4187_00290 PF07694 5TMR of 5TMR-LYT E4187_00290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_00290 PF06580 Histidine kinase E4187_00295 PF04397 LytTr DNA-binding domain E4187_00295 PF00072 Response regulator receiver domain E4187_00300 PF07690 Major Facilitator Superfamily E4187_00305 PF02222 ATP-grasp domain E4187_00305 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain E4187_00310 PF00731 AIR carboxylase E4187_00315 PF00593 TonB dependent receptor E4187_00315 PF07715 TonB-dependent Receptor Plug Domain E4187_00320 PF01177 Asp/Glu/Hydantoin racemase E4187_00350 PF13380 CoA binding domain E4187_00350 PF13607 Succinyl-CoA ligase like flavodoxin domain E4187_00350 PF00583 Acetyltransferase (GNAT) family E4187_00360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_00360 PF03466 LysR substrate binding domain E4187_00365 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain E4187_00365 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain E4187_00370 PF00342 Phosphoglucose isomerase E4187_00380 PF05552 Conserved TM helix E4187_00380 PF00924 Mechanosensitive ion channel E4187_00385 PF00440 Bacterial regulatory proteins, tetR family E4187_00395 PF00692 dUTPase E4187_00400 PF01609 Transposase DDE domain E4187_00400 PF05598 Transposase domain (DUF772) E4187_00430 PF00816 H-NS histone family E4187_00435 PF02321 Outer membrane efflux protein E4187_00440 PF01695 IstB-like ATP binding protein E4187_00445 PF00665 Integrase core domain E4187_00455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4187_00465 PF00486 Transcriptional regulatory protein, C terminal E4187_00465 PF00072 Response regulator receiver domain E4187_00470 PF00672 HAMP domain E4187_00470 PF00512 His Kinase A (phospho-acceptor) domain E4187_00470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_00490 PF01548 Transposase E4187_00490 PF02371 Transposase IS116/IS110/IS902 family E4187_00510 PF05275 Copper resistance protein B precursor (CopB) E4187_00515 PF07732 Multicopper oxidase E4187_00515 PF00394 Multicopper oxidase E4187_00515 PF07731 Multicopper oxidase E4187_00530 PF05598 Transposase domain (DUF772) E4187_00530 PF01609 Transposase DDE domain E4187_00545 PF02441 Flavoprotein E4187_00545 PF04127 DNA / pantothenate metabolism flavoprotein E4187_00550 PF04002 RadC-like JAB domain E4187_00555 PF00830 Ribosomal L28 family E4187_00560 PF00471 Ribosomal protein L33 E4187_00570 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain E4187_00570 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain E4187_00570 PF06827 Zinc finger found in FPG and IleRS E4187_00575 PF04393 Protein of unknown function (DUF535) E4187_00580 PF01467 Cytidylyltransferase-like E4187_00585 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E4187_00590 PF00535 Glycosyl transferase family 2 E4187_00595 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E4187_00600 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) E4187_00610 PF03755 YicC-like family, N-terminal region E4187_00610 PF08340 Domain of unknown function (DUF1732) E4187_00615 PF03725 3' exoribonuclease family, domain 2 E4187_00615 PF01138 3' exoribonuclease family, domain 1 E4187_00620 PF00156 Phosphoribosyl transferase domain E4187_00625 PF00403 Heavy-metal-associated domain E4187_00630 PF00376 MerR family regulatory protein E4187_00630 PF09278 MerR, DNA binding E4187_00635 PF00360 Phytochrome region E4187_00635 PF00990 Diguanylate cyclase, GGDEF domain E4187_00635 PF01590 GAF domain E4187_00635 PF00563 EAL domain E4187_00640 PF06288 Protein of unknown function (DUF1040) E4187_00645 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase E4187_00645 PF13746 4Fe-4S dicluster domain E4187_00645 PF12801 4Fe-4S binding domain E4187_00650 PF01636 Phosphotransferase enzyme family E4187_00655 PF01323 DSBA-like thioredoxin domain E4187_00660 PF00528 Binding-protein-dependent transport system inner membrane component E4187_00665 PF00005 ABC transporter E4187_00675 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain E4187_00675 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family E4187_00680 PF00857 Isochorismatase family E4187_00690 PF04463 Protein of unknown function (DUF523) E4187_00695 PF01553 Acyltransferase E4187_00700 PF01553 Acyltransferase E4187_00705 PF13335 Magnesium chelatase, subunit ChlI C-terminal E4187_00705 PF01078 Magnesium chelatase, subunit ChlI E4187_00715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E4187_00715 PF00205 Thiamine pyrophosphate enzyme, central domain E4187_00715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4187_00725 PF01063 Amino-transferase class IV E4187_00730 PF00920 Dehydratase family E4187_00735 PF00291 Pyridoxal-phosphate dependent enzyme E4187_00735 PF00585 C-terminal regulatory domain of Threonine dehydratase E4187_00755 PF00691 OmpA family E4187_00755 PF01389 OmpA-like transmembrane domain E4187_00760 PF18319 PriA DNA helicase Cys-rich region (CRR) domain E4187_00760 PF18074 Primosomal protein N C-terminal domain E4187_00760 PF17764 3′ DNA-binding domain (3′BD) E4187_00760 PF00271 Helicase conserved C-terminal domain E4187_00760 PF00270 DEAD/DEAH box helicase E4187_00765 PF01197 Ribosomal protein L31 E4187_00770 PF13460 NAD(P)H-binding E4187_00770 PF11066 Protein of unknown function (DUF2867) E4187_00775 PF03949 Malic enzyme, NAD binding domain E4187_00775 PF00390 Malic enzyme, N-terminal domain E4187_00785 PF00672 HAMP domain E4187_00785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_00785 PF00512 His Kinase A (phospho-acceptor) domain E4187_00790 PF00486 Transcriptional regulatory protein, C terminal E4187_00790 PF00072 Response regulator receiver domain E4187_00795 PF05958 tRNA (Uracil-5-)-methyltransferase E4187_00810 PF00128 Alpha amylase, catalytic domain E4187_00810 PF02903 Alpha amylase, N-terminal ig-like domain E4187_00825 PF00012 Hsp70 protein E4187_00830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4187_00830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4187_00835 PF05981 CreA protein E4187_00850 PF01258 Prokaryotic dksA/traR C4-type zinc finger E4187_00855 PF00120 Glutamine synthetase, catalytic domain E4187_00860 PF00202 Aminotransferase class-III E4187_00865 PF13416 Bacterial extracellular solute-binding protein E4187_00870 PF13416 Bacterial extracellular solute-binding protein E4187_00875 PF00005 ABC transporter E4187_00875 PF08402 TOBE domain E4187_00880 PF00528 Binding-protein-dependent transport system inner membrane component E4187_00885 PF00528 Binding-protein-dependent transport system inner membrane component E4187_00890 PF03473 MOSC domain E4187_00890 PF03475 3-alpha domain E4187_00910 PF03061 Thioesterase superfamily E4187_00915 PF00271 Helicase conserved C-terminal domain E4187_00915 PF00570 HRDC domain E4187_00915 PF16124 RecQ zinc-binding E4187_00915 PF09382 RQC domain E4187_00915 PF00270 DEAD/DEAH box helicase E4187_00920 PF00034 Cytochrome c E4187_00925 PF02696 Uncharacterized ACR, YdiU/UPF0061 family E4187_00935 PF02592 Putative vitamin uptake transporter E4187_00940 PF03737 Aldolase/RraA E4187_00945 PF00571 CBS domain E4187_00945 PF01769 Divalent cation transporter E4187_00945 PF03448 MgtE intracellular N domain E4187_00950 PF14824 Sirohaem biosynthesis protein central E4187_00950 PF10414 Sirohaem synthase dimerisation region E4187_00950 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4187_00955 PF01226 Formate/nitrite transporter E4187_00965 PF13806 Rieske-like [2Fe-2S] domain E4187_00970 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E4187_00970 PF18267 Rubredoxin NAD+ reductase C-terminal domain E4187_00970 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E4187_00970 PF04324 BFD-like [2Fe-2S] binding domain E4187_00970 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4187_00985 PF00005 ABC transporter E4187_00990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4187_01000 PF03466 LysR substrate binding domain E4187_01000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_01005 PF07690 Major Facilitator Superfamily E4187_01010 PF10431 C-terminal, D2-small domain, of ClpB protein E4187_01010 PF07724 AAA domain (Cdc48 subfamily) E4187_01010 PF00004 ATPase family associated with various cellular activities (AAA) E4187_01015 PF00227 Proteasome subunit E4187_01025 PF05746 DALR anticodon binding domain E4187_01025 PF00750 tRNA synthetases class I (R) E4187_01025 PF03485 Arginyl tRNA synthetase N terminal domain E4187_01035 PF04545 Sigma-70, region 4 E4187_01035 PF04542 Sigma-70 region 2 E4187_01040 PF12973 ChrR Cupin-like domain E4187_01045 PF02673 Bacitracin resistance protein BacA E4187_01050 PF00248 Aldo/keto reductase family E4187_01055 PF01263 Aldose 1-epimerase E4187_01060 PF00288 GHMP kinases N terminal domain E4187_01060 PF10509 Galactokinase galactose-binding signature E4187_01060 PF08544 GHMP kinases C terminal E4187_01065 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain E4187_01065 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain E4187_01070 PF16363 GDP-mannose 4,6 dehydratase E4187_01075 PF00356 Bacterial regulatory proteins, lacI family E4187_01080 PF02837 Glycosyl hydrolases family 2, sugar binding domain E4187_01080 PF02836 Glycosyl hydrolases family 2, TIM barrel domain E4187_01080 PF00703 Glycosyl hydrolases family 2 E4187_01080 PF16353 Domain of unknown function(DUF4981) E4187_01080 PF02929 Beta galactosidase small chain E4187_01085 PF13407 Periplasmic binding protein domain E4187_01090 PF00005 ABC transporter E4187_01095 PF02653 Branched-chain amino acid transport system / permease component E4187_01100 PF02743 Cache domain E4187_01100 PF00672 HAMP domain E4187_01100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_01115 PF00696 Amino acid kinase family E4187_01120 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4187_01120 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4187_01125 PF03606 C4-dicarboxylate anaerobic carrier E4187_01130 PF01316 Arginine repressor, DNA binding domain E4187_01130 PF02863 Arginine repressor, C-terminal domain E4187_01135 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain E4187_01135 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain E4187_01140 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4187_01140 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4187_01165 PF02743 Cache domain E4187_01165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_01165 PF00672 HAMP domain E4187_01170 PF08212 Lipocalin-like domain E4187_01175 PF06719 AraC-type transcriptional regulator N-terminus E4187_01175 PF12833 Helix-turn-helix domain E4187_01180 PF00465 Iron-containing alcohol dehydrogenase E4187_01185 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E4187_01185 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch E4187_01185 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E4187_01190 PF02233 NAD(P) transhydrogenase beta subunit E4187_01195 PF03313 Serine dehydratase alpha chain E4187_01200 PF00375 Sodium:dicarboxylate symporter family E4187_01205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4187_01205 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4187_01210 PF13525 Outer membrane lipoprotein E4187_01215 PF01479 S4 domain E4187_01215 PF00849 RNA pseudouridylate synthase E4187_01225 PF02861 Clp amino terminal domain, pathogenicity island component E4187_01225 PF17871 AAA lid domain E4187_01225 PF07724 AAA domain (Cdc48 subfamily) E4187_01225 PF00004 ATPase family associated with various cellular activities (AAA) E4187_01225 PF10431 C-terminal, D2-small domain, of ClpB protein E4187_01230 PF03590 Aspartate-ammonia ligase E4187_01235 PF01037 Lrp/AsnC ligand binding domain E4187_01245 PF10063 Uncharacterized integral membrane protein (DUF2301) E4187_01250 PF00478 IMP dehydrogenase / GMP reductase domain E4187_01250 PF00571 CBS domain E4187_01270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_01270 PF00512 His Kinase A (phospho-acceptor) domain E4187_01280 PF00158 Sigma-54 interaction domain E4187_01280 PF00072 Response regulator receiver domain E4187_01285 PF06496 Protein of unknown function (DUF1097) E4187_01295 PF00174 Oxidoreductase molybdopterin binding domain E4187_01300 PF01794 Ferric reductase like transmembrane component E4187_01315 PF00072 Response regulator receiver domain E4187_01315 PF00486 Transcriptional regulatory protein, C terminal E4187_01320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_01320 PF08918 PhoQ Sensor E4187_01330 PF00384 Molybdopterin oxidoreductase E4187_01330 PF01568 Molydopterin dinucleotide binding domain E4187_01330 PF18364 Molybdopterin oxidoreductase N-terminal domain E4187_01335 PF03264 NapC/NirT cytochrome c family, N-terminal region E4187_01340 PF01751 Toprim domain E4187_01340 PF01131 DNA topoisomerase E4187_01345 PF02386 Cation transport protein E4187_01350 PF02080 TrkA-C domain E4187_01350 PF02254 TrkA-N domain E4187_01355 PF01565 FAD binding domain E4187_01355 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain E4187_01360 PF02237 Biotin protein ligase C terminal domain E4187_01360 PF03099 Biotin/lipoate A/B protein ligase family E4187_01360 PF08279 HTH domain E4187_01365 PF00485 Phosphoribulokinase / Uridine kinase family E4187_01380 PF03144 Elongation factor Tu domain 2 E4187_01380 PF03143 Elongation factor Tu C-terminal domain E4187_01380 PF00009 Elongation factor Tu GTP binding domain E4187_01390 PF00584 SecE/Sec61-gamma subunits of protein translocation complex E4187_01395 PF00467 KOW motif E4187_01395 PF02357 Transcription termination factor nusG E4187_01400 PF00298 Ribosomal protein L11, RNA binding domain E4187_01400 PF03946 Ribosomal protein L11, N-terminal domain E4187_01405 PF00687 Ribosomal protein L1p/L10e family E4187_01410 PF00466 Ribosomal protein L10 E4187_01415 PF00542 Ribosomal protein L7/L12 C-terminal domain E4187_01415 PF16320 Ribosomal protein L7/L12 dimerisation domain E4187_01420 PF04560 RNA polymerase Rpb2, domain 7 E4187_01420 PF04565 RNA polymerase Rpb2, domain 3 E4187_01420 PF00562 RNA polymerase Rpb2, domain 6 E4187_01420 PF04561 RNA polymerase Rpb2, domain 2 E4187_01420 PF10385 RNA polymerase beta subunit external 1 domain E4187_01420 PF04563 RNA polymerase beta subunit E4187_01425 PF04998 RNA polymerase Rpb1, domain 5 E4187_01425 PF04983 RNA polymerase Rpb1, domain 3 E4187_01425 PF00623 RNA polymerase Rpb1, domain 2 E4187_01425 PF05000 RNA polymerase Rpb1, domain 4 E4187_01425 PF04997 RNA polymerase Rpb1, domain 1 E4187_01430 PF13309 HTH domain E4187_01430 PF08348 YheO-like PAS domain E4187_01435 PF01042 Endoribonuclease L-PSP E4187_01440 PF02635 DsrE/DsrF-like family E4187_01445 PF02635 DsrE/DsrF-like family E4187_01450 PF04077 DsrH like protein E4187_01455 PF00164 Ribosomal protein S12/S23 E4187_01460 PF00177 Ribosomal protein S7p/S5e E4187_01465 PF03144 Elongation factor Tu domain 2 E4187_01465 PF03764 Elongation factor G, domain IV E4187_01465 PF14492 Elongation Factor G, domain II E4187_01465 PF00679 Elongation factor G C-terminus E4187_01465 PF00009 Elongation factor Tu GTP binding domain E4187_01470 PF03144 Elongation factor Tu domain 2 E4187_01470 PF03143 Elongation factor Tu C-terminal domain E4187_01470 PF00009 Elongation factor Tu GTP binding domain E4187_01510 PF03079 ARD/ARD' family E4187_01515 PF00860 Permease family E4187_01520 PF02733 Dak1 domain E4187_01525 PF02734 DAK2 domain E4187_01530 PF00391 PEP-utilising enzyme, mobile domain E4187_01530 PF05524 PEP-utilising enzyme, N-terminal E4187_01530 PF03610 PTS system fructose IIA component E4187_01530 PF00381 PTS HPr component phosphorylation site E4187_01535 PF00465 Iron-containing alcohol dehydrogenase E4187_01540 PF00989 PAS fold E4187_01540 PF02954 Bacterial regulatory protein, Fis family E4187_01540 PF00158 Sigma-54 interaction domain E4187_01545 PF00106 short chain dehydrogenase E4187_01550 PF01594 AI-2E family transporter E4187_01555 PF01569 PAP2 superfamily E4187_01575 PF00199 Catalase E4187_01575 PF06628 Catalase-related immune-responsive E4187_01580 PF00583 Acetyltransferase (GNAT) family E4187_01600 PF00990 Diguanylate cyclase, GGDEF domain E4187_01610 PF00005 ABC transporter E4187_01610 PF08402 TOBE domain E4187_01620 PF00528 Binding-protein-dependent transport system inner membrane component E4187_01635 PF00392 Bacterial regulatory proteins, gntR family E4187_01635 PF07702 UTRA domain E4187_01645 PF03466 LysR substrate binding domain E4187_01645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_01655 PF17954 Quercetinase C-terminal cupin domain E4187_01655 PF02678 Pirin E4187_01660 PF07681 DoxX E4187_01665 PF17946 RecC C-terminal domain E4187_01670 PF00580 UvrD/REP helicase N-terminal domain E4187_01670 PF13361 UvrD-like helicase C-terminal domain E4187_01670 PF12705 PD-(D/E)XK nuclease superfamily E4187_01675 PF13538 UvrD-like helicase C-terminal domain E4187_01695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4187_01705 PF00909 Ammonium Transporter Family E4187_01710 PF00543 Nitrogen regulatory protein P-II E4187_01715 PF00990 Diguanylate cyclase, GGDEF domain E4187_01715 PF08448 PAS fold E4187_01725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_01725 PF00672 HAMP domain E4187_01735 PF00486 Transcriptional regulatory protein, C terminal E4187_01735 PF00072 Response regulator receiver domain E4187_01740 PF00672 HAMP domain E4187_01740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_01740 PF00512 His Kinase A (phospho-acceptor) domain E4187_01745 PF00313 'Cold-shock' DNA-binding domain E4187_01770 PF01381 Helix-turn-helix E4187_01785 PF02909 Tetracyclin repressor-like, C-terminal domain E4187_01785 PF00440 Bacterial regulatory proteins, tetR family E4187_01790 PF07690 Major Facilitator Superfamily E4187_01805 PF13538 UvrD-like helicase C-terminal domain E4187_01805 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain E4187_01805 PF14490 Helix-hairpin-helix containing domain E4187_01840 PF11799 impB/mucB/samB family C-terminal domain E4187_01840 PF00817 impB/mucB/samB family E4187_01840 PF13438 Domain of unknown function (DUF4113) E4187_01845 PF01381 Helix-turn-helix E4187_01860 PF00440 Bacterial regulatory proteins, tetR family E4187_01860 PF02909 Tetracyclin repressor-like, C-terminal domain E4187_01865 PF07690 Major Facilitator Superfamily E4187_01915 PF00436 Single-strand binding protein family E4187_01920 PF00196 Bacterial regulatory proteins, luxR family E4187_01925 PF17755 UvrA DNA-binding domain E4187_01925 PF00005 ABC transporter E4187_01925 PF17760 UvrA interaction domain E4187_01930 PF03922 OmpW family E4187_01935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_01935 PF00672 HAMP domain E4187_01935 PF12729 Four helix bundle sensory module for signal transduction E4187_01950 PF02219 Methylenetetrahydrofolate reductase E4187_01960 PF02903 Alpha amylase, N-terminal ig-like domain E4187_01960 PF00128 Alpha amylase, catalytic domain E4187_01960 PF16657 Maltogenic Amylase, C-terminal domain E4187_01980 PF00106 short chain dehydrogenase E4187_01995 PF00465 Iron-containing alcohol dehydrogenase E4187_02005 PF01053 Cys/Met metabolism PLP-dependent enzyme E4187_02015 PF12793 Sugar transport-related sRNA regulator N-term E4187_02015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4187_02035 PF00561 alpha/beta hydrolase fold E4187_02045 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E4187_02045 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E4187_02050 PF02698 DUF218 domain E4187_02055 PF08453 Peptidase family M9 N-terminal E4187_02055 PF01752 Collagenase E4187_02060 PF00501 AMP-binding enzyme E4187_02065 PF13378 Enolase C-terminal domain-like E4187_02070 PF00378 Enoyl-CoA hydratase/isomerase E4187_02075 PF12697 Alpha/beta hydrolase family E4187_02080 PF16582 Middle domain of thiamine pyrophosphate E4187_02080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E4187_02080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4187_02085 PF00425 chorismate binding enzyme E4187_02090 PF01040 UbiA prenyltransferase family E4187_02115 PF00271 Helicase conserved C-terminal domain E4187_02115 PF03880 DbpA RNA binding domain E4187_02115 PF00270 DEAD/DEAH box helicase E4187_02120 PF01773 Na+ dependent nucleoside transporter N-terminus E4187_02120 PF07662 Na+ dependent nucleoside transporter C-terminus E4187_02120 PF07670 Nucleoside recognition E4187_02135 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 E4187_02140 PF01544 CorA-like Mg2+ transporter protein E4187_02160 PF05068 Mannitol repressor E4187_02165 PF08125 Mannitol dehydrogenase C-terminal domain E4187_02165 PF01232 Mannitol dehydrogenase Rossmann domain E4187_02170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4187_02170 PF02378 Phosphotransferase system, EIIC E4187_02170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E4187_02175 PF17876 Cold shock domain E4187_02175 PF08206 Ribonuclease B OB domain E4187_02175 PF00773 RNB domain E4187_02180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_02180 PF03466 LysR substrate binding domain E4187_02185 PF00765 Autoinducer synthase E4187_02190 PF00196 Bacterial regulatory proteins, luxR family E4187_02190 PF03472 Autoinducer binding domain E4187_02195 PF01810 LysE type translocator E4187_02200 PF00149 Calcineurin-like phosphoesterase E4187_02200 PF02872 5'-nucleotidase, C-terminal domain E4187_02205 PF03279 Bacterial lipid A biosynthesis acyltransferase E4187_02210 PF00294 pfkB family carbohydrate kinase E4187_02210 PF01467 Cytidylyltransferase-like E4187_02215 PF02321 Outer membrane efflux protein E4187_02220 PF00293 NUDIX domain E4187_02225 PF06853 Protein of unknown function (DUF1249) E4187_02230 PF00149 Calcineurin-like phosphoesterase E4187_02235 PF05728 Uncharacterised protein family (UPF0227) E4187_02240 PF00293 NUDIX domain E4187_02250 PF00204 DNA gyrase B E4187_02250 PF01751 Toprim domain E4187_02250 PF00986 DNA gyrase B subunit, carboxyl terminus E4187_02250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_02255 PF00521 DNA gyrase/topoisomerase IV, subunit A E4187_02255 PF03989 DNA gyrase C-terminal domain, beta-propeller E4187_02285 PF03466 LysR substrate binding domain E4187_02285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_02320 PF00684 DnaJ central domain E4187_02320 PF00226 DnaJ domain E4187_02320 PF01556 DnaJ C terminal domain E4187_02330 PF00578 AhpC/TSA family E4187_02350 PF01553 Acyltransferase E4187_02355 PF04012 PspA/IM30 family E4187_02370 PF01541 GIY-YIG catalytic domain E4187_02375 PF00892 EamA-like transporter family E4187_02380 PF03167 Uracil DNA glycosylase superfamily E4187_02390 PF03466 LysR substrate binding domain E4187_02390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_02395 PF00950 ABC 3 transport family E4187_02400 PF00005 ABC transporter E4187_02405 PF01297 Zinc-uptake complex component A periplasmic E4187_02425 PF01476 LysM domain E4187_02425 PF08525 Opacity-associated protein A N-terminal motif E4187_02425 PF01551 Peptidase family M23 E4187_02430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4187_02435 PF04222 Protein of unknown function (DUF416) E4187_02450 PF02028 BCCT, betaine/carnitine/choline family transporter E4187_02455 PF01624 MutS domain I E4187_02455 PF00488 MutS domain V E4187_02455 PF05190 MutS family domain IV E4187_02455 PF05188 MutS domain II E4187_02455 PF05192 MutS domain III E4187_02465 PF02464 Competence-damaged protein E4187_02470 PF00154 recA bacterial DNA recombination protein E4187_02475 PF02631 RecX family E4187_02480 PF02272 DHHA1 domain E4187_02480 PF01411 tRNA synthetases class II (A) E4187_02480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4187_02485 PF00696 Amino acid kinase family E4187_02485 PF01842 ACT domain E4187_02485 PF13840 ACT domain E4187_02490 PF02599 Global regulator protein family E4187_02525 PF00768 D-alanyl-D-alanine carboxypeptidase E4187_02530 PF09335 SNARE associated Golgi protein E4187_02535 PF01595 Cyclin M transmembrane N-terminal domain E4187_02535 PF03471 Transporter associated domain E4187_02535 PF00571 CBS domain E4187_02540 PF01609 Transposase DDE domain E4187_02540 PF13006 Insertion element 4 transposase N-terminal E4187_02545 PF10458 Valyl tRNA synthetase tRNA binding arm E4187_02545 PF00133 tRNA synthetases class I (I, L, M and V) E4187_02545 PF08264 Anticodon-binding domain of tRNA E4187_02550 PF04364 DNA polymerase III chi subunit, HolC E4187_02555 PF02789 Cytosol aminopeptidase family, N-terminal domain E4187_02555 PF00883 Cytosol aminopeptidase family, catalytic domain E4187_02560 PF03739 Lipopolysaccharide export system permease LptF/LptG E4187_02565 PF03739 Lipopolysaccharide export system permease LptF/LptG E4187_02585 PF00909 Ammonium Transporter Family E4187_02590 PF05958 tRNA (Uracil-5-)-methyltransferase E4187_02590 PF01938 TRAM domain E4187_02610 PF01026 TatD related DNase E4187_02615 PF01773 Na+ dependent nucleoside transporter N-terminus E4187_02615 PF07662 Na+ dependent nucleoside transporter C-terminus E4187_02615 PF07670 Nucleoside recognition E4187_02625 PF01791 DeoC/LacD family aldolase E4187_02630 PF00591 Glycosyl transferase family, a/b domain E4187_02630 PF02885 Glycosyl transferase family, helical bundle domain E4187_02630 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain E4187_02635 PF01676 Metalloenzyme superfamily E4187_02640 PF01048 Phosphorylase superfamily E4187_02650 PF11737 Protein of unknown function (DUF3300) E4187_02660 PF18429 Domain of unknown function (DUF5609) E4187_02675 PF18073 Rubredoxin metal binding domain E4187_02680 PF07238 PilZ domain E4187_02685 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ E4187_02690 PF00216 Bacterial DNA-binding protein E4187_02705 PF01207 Dihydrouridine synthase (Dus) E4187_02710 PF01475 Ferric uptake regulator family E4187_02725 PF05525 Branched-chain amino acid transport protein E4187_02730 PF05175 Methyltransferase small domain E4187_02735 PF00271 Helicase conserved C-terminal domain E4187_02735 PF00270 DEAD/DEAH box helicase E4187_02740 PF03883 Peroxide stress protein YaaA E4187_02750 PF00437 Type II/IV secretion system protein E4187_02755 PF01168 Alanine racemase, N-terminal domain E4187_02760 PF14748 Pyrroline-5-carboxylate reductase dimerisation E4187_02760 PF03807 NADP oxidoreductase coenzyme F420-dependent E4187_02765 PF02325 YGGT family E4187_02770 PF02594 Uncharacterised ACR, YggU family COG1872 E4187_02790 PF06062 Uncharacterised protein family (UPF0231) E4187_02795 PF05651 Putative sugar diacid recognition E4187_02795 PF17853 GGDEF-like domain E4187_02795 PF13556 PucR C-terminal helix-turn-helix domain E4187_02800 PF02447 GntP family permease E4187_02805 PF02595 Glycerate kinase family E4187_02815 PF00255 Glutathione peroxidase E4187_02820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_02820 PF03466 LysR substrate binding domain E4187_02825 PF07662 Na+ dependent nucleoside transporter C-terminus E4187_02825 PF01773 Na+ dependent nucleoside transporter N-terminus E4187_02825 PF07670 Nucleoside recognition E4187_02830 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E4187_02830 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E4187_02835 PF00472 RF-1 domain E4187_02840 PF00543 Nitrogen regulatory protein P-II E4187_02855 PF08402 TOBE domain E4187_02855 PF00005 ABC transporter E4187_02860 PF04261 Dyp-type peroxidase family E4187_02865 PF02863 Arginine repressor, C-terminal domain E4187_02865 PF01316 Arginine repressor, DNA binding domain E4187_02870 PF00005 ABC transporter E4187_02875 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4187_02880 PF00528 Binding-protein-dependent transport system inner membrane component E4187_02885 PF00528 Binding-protein-dependent transport system inner membrane component E4187_02890 PF00056 lactate/malate dehydrogenase, NAD binding domain E4187_02890 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain E4187_02895 PF08238 Sel1 repeat E4187_02900 PF00175 Oxidoreductase NAD-binding domain E4187_02900 PF00970 Oxidoreductase FAD-binding domain E4187_02900 PF00042 Globin E4187_02905 PF02082 Transcriptional regulator E4187_02910 PF01595 Cyclin M transmembrane N-terminal domain E4187_02910 PF03471 Transporter associated domain E4187_02910 PF00571 CBS domain E4187_02915 PF01578 Cytochrome C assembly protein E4187_02920 PF00448 SRP54-type protein, GTPase domain E4187_02920 PF02881 SRP54-type protein, helical bundle domain E4187_02920 PF02978 Signal peptide binding domain E4187_02925 PF00886 Ribosomal protein S16 E4187_02930 PF05239 PRC-barrel domain E4187_02930 PF01782 RimM N-terminal domain E4187_02935 PF01746 tRNA (Guanine-1)-methyltransferase E4187_02940 PF01245 Ribosomal protein L19 E4187_02950 PF02976 DNA mismatch repair enzyme MutH E4187_02955 PF00293 NUDIX domain E4187_02960 PF02896 PEP-utilising enzyme, TIM barrel domain E4187_02960 PF00391 PEP-utilising enzyme, mobile domain E4187_02960 PF05524 PEP-utilising enzyme, N-terminal E4187_02960 PF01590 GAF domain E4187_02965 PF01790 Prolipoprotein diacylglyceryl transferase E4187_02975 PF02899 Phage integrase, N-terminal SAM-like domain E4187_02975 PF00589 Phage integrase family E4187_03000 PF00303 Thymidylate synthase E4187_03005 PF05598 Transposase domain (DUF772) E4187_03005 PF01609 Transposase DDE domain E4187_03010 PF00892 EamA-like transporter family E4187_03015 PF08019 Phosphoethanolamine transferase EptA/EptB E4187_03015 PF00884 Sulfatase E4187_03020 PF08019 Phosphoethanolamine transferase EptA/EptB E4187_03020 PF00884 Sulfatase E4187_03025 PF01219 Prokaryotic diacylglycerol kinase E4187_03030 PF09722 Protein of unknown function (DUF2384) E4187_03045 PF00816 H-NS histone family E4187_03065 PF13808 DDE_Tnp_1-associated E4187_03065 PF01609 Transposase DDE domain E4187_03095 PF00665 Integrase core domain E4187_03100 PF01695 IstB-like ATP binding protein E4187_03115 PF06965 Na+/H+ antiporter 1 E4187_03125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_03125 PF03466 LysR substrate binding domain E4187_03130 PF01022 Bacterial regulatory protein, arsR family E4187_03135 PF01649 Ribosomal protein S20 E4187_03140 PF03023 Lipid II flippase MurJ E4187_03145 PF01687 Riboflavin kinase E4187_03145 PF06574 FAD synthetase E4187_03150 PF06827 Zinc finger found in FPG and IleRS E4187_03150 PF00133 tRNA synthetases class I (I, L, M and V) E4187_03150 PF08264 Anticodon-binding domain of tRNA E4187_03155 PF01252 Signal peptidase (SPase) II E4187_03160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4187_03165 PF02401 LytB protein E4187_03195 PF00795 Carbon-nitrogen hydrolase E4187_03195 PF02540 NAD synthase E4187_03200 PF00543 Nitrogen regulatory protein P-II E4187_03210 PF02664 S-Ribosylhomocysteinase (LuxS) E4187_03215 PF00990 Diguanylate cyclase, GGDEF domain E4187_03220 PF08206 Ribonuclease B OB domain E4187_03220 PF00575 S1 RNA binding domain E4187_03220 PF00773 RNB domain E4187_03220 PF08461 Ribonuclease R winged-helix domain E4187_03220 PF17876 Cold shock domain E4187_03225 PF00588 SpoU rRNA Methylase family E4187_03225 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4187_03235 PF13673 Acetyltransferase (GNAT) domain E4187_03250 PF01566 Natural resistance-associated macrophage protein E4187_03255 PF01250 Ribosomal protein S6 E4187_03260 PF01084 Ribosomal protein S18 E4187_03265 PF01281 Ribosomal protein L9, N-terminal domain E4187_03265 PF03948 Ribosomal protein L9, C-terminal domain E4187_03270 PF00970 Oxidoreductase FAD-binding domain E4187_03270 PF00175 Oxidoreductase NAD-binding domain E4187_03295 PF00107 Zinc-binding dehydrogenase E4187_03295 PF08240 Alcohol dehydrogenase GroES-like domain E4187_03300 PF09335 SNARE associated Golgi protein E4187_03305 PF00675 Insulinase (Peptidase family M16) E4187_03305 PF05193 Peptidase M16 inactive domain E4187_03310 PF04262 Glutamate-cysteine ligase E4187_03315 PF03605 Anaerobic c4-dicarboxylate membrane transporter E4187_03320 PF00206 Lyase E4187_03320 PF10415 Fumarase C C-terminus E4187_03325 PF04186 FxsA cytoplasmic membrane protein E4187_03330 PF01554 MatE E4187_03335 PF00166 Chaperonin 10 Kd subunit E4187_03340 PF00118 TCP-1/cpn60 chaperonin family E4187_03350 PF03707 Bacterial signalling protein N terminal repeat E4187_03350 PF00990 Diguanylate cyclase, GGDEF domain E4187_03350 PF00563 EAL domain E4187_03360 PF00849 RNA pseudouridylate synthase E4187_03365 PF00271 Helicase conserved C-terminal domain E4187_03365 PF12137 RNA polymerase recycling family C-terminal E4187_03365 PF18339 RapA N-terminal Tudor like domain 1 E4187_03365 PF18337 RapA N-terminal Tudor like domain E4187_03365 PF00176 SNF2 family N-terminal domain E4187_03405 PF00528 Binding-protein-dependent transport system inner membrane component E4187_03410 PF00528 Binding-protein-dependent transport system inner membrane component E4187_03415 PF00005 ABC transporter E4187_03415 PF12857 TOBE-like domain E4187_03420 PF03466 LysR substrate binding domain E4187_03420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_03430 PF18416 N-acetylglucosamine binding protein domain 2 E4187_03430 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading E4187_03435 PF17200 Single Cache domain 2 E4187_03435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_03435 PF00672 HAMP domain E4187_03460 PF11230 Protein of unknown function (DUF3029) E4187_03465 PF04055 Radical SAM superfamily E4187_03475 PF03466 LysR substrate binding domain E4187_03475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_03480 PF00155 Aminotransferase class I and II E4187_03495 PF06564 Cellulose biosynthesis protein BcsQ E4187_03500 PF07238 PilZ domain E4187_03500 PF00535 Glycosyl transferase family 2 E4187_03505 PF03170 Bacterial cellulose synthase subunit E4187_03510 PF01270 Glycosyl hydrolases family 8 E4187_03515 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) E4187_03520 PF02583 Metal-sensitive transcriptional repressor E4187_03535 PF18494 Pullulanase Ins domain E4187_03535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E4187_03535 PF17967 Pullulanase N2 domain E4187_03535 PF03714 Bacterial pullanase-associated domain E4187_03535 PF11852 Domain of unknown function (DUF3372) E4187_03540 PF00403 Heavy-metal-associated domain E4187_03545 PF08534 Redoxin E4187_03550 PF00270 DEAD/DEAH box helicase E4187_03550 PF00271 Helicase conserved C-terminal domain E4187_03565 PF03372 Endonuclease/Exonuclease/phosphatase family E4187_03570 PF08447 PAS fold E4187_03570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_03580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4187_03590 PF10952 Protein of unknown function (DUF2753) E4187_03595 PF00378 Enoyl-CoA hydratase/isomerase E4187_03610 PF00106 short chain dehydrogenase E4187_03615 PF03129 Anticodon binding domain E4187_03615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4187_03615 PF04073 Aminoacyl-tRNA editing domain E4187_03620 PF01330 RuvA N terminal domain E4187_03620 PF07499 RuvA, C-terminal domain E4187_03625 PF17864 RuvB AAA lid domain E4187_03625 PF05491 RuvB C-terminal winged helix domain E4187_03625 PF05496 Holliday junction DNA helicase RuvB P-loop domain E4187_03635 PF01654 Cytochrome bd terminal oxidase subunit I E4187_03640 PF02322 Cytochrome bd terminal oxidase subunit II E4187_03645 PF08173 Membrane bound YbgT-like protein E4187_03650 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) E4187_03655 PF03061 Thioesterase superfamily E4187_03660 PF01618 MotA/TolQ/ExbB proton channel family E4187_03665 PF02472 Biopolymer transport protein ExbD/TolR E4187_03675 PF04052 TolB amino-terminal domain E4187_03675 PF07676 WD40-like Beta Propeller Repeat E4187_03680 PF00691 OmpA family E4187_03685 PF16331 TolA binding protein trimerisation E4187_03685 PF13174 Tetratricopeptide repeat E4187_03760 PF02445 Quinolinate synthetase A protein E4187_03765 PF01263 Aldose 1-epimerase E4187_03770 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E4187_03770 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E4187_03775 PF02446 4-alpha-glucanotransferase E4187_03780 PF02806 Alpha amylase, C-terminal all-beta domain E4187_03780 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E4187_03780 PF00128 Alpha amylase, catalytic domain E4187_03785 PF00128 Alpha amylase, catalytic domain E4187_03785 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E4187_03790 PF01641 SelR domain E4187_03800 PF00293 NUDIX domain E4187_03805 PF00107 Zinc-binding dehydrogenase E4187_03805 PF16884 N-terminal domain of oxidoreductase E4187_03810 PF01047 MarR family E4187_03825 PF01037 Lrp/AsnC ligand binding domain E4187_03835 PF07690 Major Facilitator Superfamily E4187_03855 PF00209 Sodium:neurotransmitter symporter family E4187_03860 PF00209 Sodium:neurotransmitter symporter family E4187_03875 PF00155 Aminotransferase class I and II E4187_03875 PF00392 Bacterial regulatory proteins, gntR family E4187_03890 PF01177 Asp/Glu/Hydantoin racemase E4187_03900 PF00501 AMP-binding enzyme E4187_03910 PF00583 Acetyltransferase (GNAT) family E4187_03920 PF17868 AAA lid domain E4187_03920 PF12592 Protein of unknown function (DUF3763) E4187_03920 PF07728 AAA domain (dynein-related subfamily) E4187_03925 PF05762 VWA domain containing CoxE-like protein E4187_03930 PF00990 Diguanylate cyclase, GGDEF domain E4187_03930 PF03707 Bacterial signalling protein N terminal repeat E4187_03930 PF13188 PAS domain E4187_03930 PF00563 EAL domain E4187_03935 PF00072 Response regulator receiver domain E4187_03935 PF00990 Diguanylate cyclase, GGDEF domain E4187_03940 PF00009 Elongation factor Tu GTP binding domain E4187_03940 PF03144 Elongation factor Tu domain 2 E4187_03940 PF16658 Class II release factor RF3, C-terminal domain E4187_03945 PF00583 Acetyltransferase (GNAT) family E4187_03950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4187_03965 PF03466 LysR substrate binding domain E4187_03965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_03970 PF04371 Porphyromonas-type peptidyl-arginine deiminase E4187_03975 PF01425 Amidase E4187_03985 PF01609 Transposase DDE domain E4187_03985 PF05598 Transposase domain (DUF772) E4187_04005 PF00270 DEAD/DEAH box helicase E4187_04005 PF00271 Helicase conserved C-terminal domain E4187_04010 PF00990 Diguanylate cyclase, GGDEF domain E4187_04020 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase E4187_04035 PF00445 Ribonuclease T2 family E4187_04045 PF03060 Nitronate monooxygenase E4187_04085 PF01695 IstB-like ATP binding protein E4187_04090 PF00665 Integrase core domain E4187_04105 PF13638 PIN domain E4187_04105 PF02562 PhoH-like protein E4187_04110 PF00005 ABC transporter E4187_04115 PF00528 Binding-protein-dependent transport system inner membrane component E4187_04135 PF00694 Aconitase C-terminal domain E4187_04140 PF00330 Aconitase family (aconitate hydratase) E4187_04145 PF00180 Isocitrate/isopropylmalate dehydrogenase E4187_04150 PF00682 HMGL-like E4187_04150 PF08502 LeuA allosteric (dimerisation) domain E4187_04160 PF01569 PAP2 superfamily E4187_04165 PF04101 Glycosyltransferase family 28 C-terminal domain E4187_04165 PF03033 Glycosyltransferase family 28 N-terminal domain E4187_04175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E4187_04175 PF00205 Thiamine pyrophosphate enzyme, central domain E4187_04175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4187_04180 PF10369 Small subunit of acetolactate synthase E4187_04185 PF07085 DRTGG domain E4187_04185 PF01515 Phosphate acetyl/butaryl transferase E4187_04190 PF00871 Acetokinase family E4187_04195 PF04217 Protein of unknown function, DUF412 E4187_04200 PF03887 YfbU domain E4187_04205 PF00578 AhpC/TSA family E4187_04210 PF01842 ACT domain E4187_04215 PF00701 Dihydrodipicolinate synthetase family E4187_04220 PF06804 NlpB/DapX lipoprotein E4187_04225 PF01259 SAICAR synthetase E4187_04235 PF03466 LysR substrate binding domain E4187_04235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_04260 PF00512 His Kinase A (phospho-acceptor) domain E4187_04260 PF18415 Histidine kinase receptor ArcB trans-membrane domain E4187_04260 PF01627 Hpt domain E4187_04260 PF00989 PAS fold E4187_04260 PF00072 Response regulator receiver domain E4187_04260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_04265 PF13286 Phosphohydrolase-associated domain E4187_04265 PF01966 HD domain E4187_04300 PF00990 Diguanylate cyclase, GGDEF domain E4187_04300 PF03707 Bacterial signalling protein N terminal repeat E4187_04300 PF00563 EAL domain E4187_04305 PF00672 HAMP domain E4187_04305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_04310 PF02357 Transcription termination factor nusG E4187_04315 PF03180 NLPA lipoprotein E4187_04320 PF00528 Binding-protein-dependent transport system inner membrane component E4187_04325 PF00005 ABC transporter E4187_04325 PF09383 NIL domain E4187_04335 PF00480 ROK family E4187_04340 PF08331 Domain of unknown function (DUF1730) E4187_04345 PF01256 Carbohydrate kinase E4187_04345 PF03853 YjeF-related protein N-terminus E4187_04350 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE E4187_04355 PF01520 N-acetylmuramoyl-L-alanine amidase E4187_04360 PF08676 MutL C terminal dimerisation domain E4187_04360 PF01119 DNA mismatch repair protein, C-terminal domain E4187_04370 PF17209 Hfq protein E4187_04375 PF01926 50S ribosome-binding GTPase E4187_04375 PF13167 GTP-binding GTPase N-terminal E4187_04375 PF16360 GTP-binding GTPase Middle Region E4187_04380 PF12221 Bacterial membrane protein N terminal E4187_04380 PF01145 SPFH domain / Band 7 family E4187_04385 PF01145 SPFH domain / Band 7 family E4187_04390 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) E4187_04395 PF00348 Polyprenyl synthetase E4187_04400 PF00829 Ribosomal prokaryotic L21 protein E4187_04405 PF01016 Ribosomal L27 protein E4187_04410 PF01926 50S ribosome-binding GTPase E4187_04410 PF01018 GTP1/OBG E4187_04425 PF00296 Luciferase-like monooxygenase E4187_04435 PF00149 Calcineurin-like phosphoesterase E4187_04440 PF04379 ApaG domain E4187_04445 PF00398 Ribosomal RNA adenine dimethylase E4187_04450 PF04166 Pyridoxal phosphate biosynthetic protein PdxA E4187_04455 PF09312 SurA N-terminal domain E4187_04455 PF00639 PPIC-type PPIASE domain E4187_04460 PF03968 OstA-like protein E4187_04460 PF04453 LPS transport system D E4187_04465 PF01636 Phosphotransferase enzyme family E4187_04470 PF00483 Nucleotidyl transferase E4187_04475 PF00226 DnaJ domain E4187_04475 PF05099 Tellurite resistance protein TerB E4187_04485 PF00860 Permease family E4187_04495 PF00005 ABC transporter E4187_04495 PF12848 ABC transporter E4187_04500 PF01464 Transglycosylase SLT domain E4187_04505 PF00535 Glycosyl transferase family 2 E4187_04515 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase E4187_04520 PF01370 NAD dependent epimerase/dehydratase family E4187_04525 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E4187_04525 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E4187_04525 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E4187_04535 PF00005 ABC transporter E4187_04540 PF01032 FecCD transport family E4187_04550 PF06228 Haem utilisation ChuX/HutX E4187_04555 PF01243 Pyridoxamine 5'-phosphate oxidase E4187_04575 PF07715 TonB-dependent Receptor Plug Domain E4187_04575 PF00593 TonB dependent receptor E4187_04580 PF12832 MFS_1 like family E4187_04585 PF00512 His Kinase A (phospho-acceptor) domain E4187_04585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_04590 PF08329 Chitinase A, N-terminal domain E4187_04590 PF00704 Glycosyl hydrolases family 18 E4187_04600 PF17945 Beta/Gamma crystallin E4187_04600 PF12561 ToxR activated gene A lipoprotein domain E4187_04605 PF08241 Methyltransferase domain E4187_04610 PF13545 Crp-like helix-turn-helix domain E4187_04610 PF00027 Cyclic nucleotide-binding domain E4187_04615 PF02566 OsmC-like protein E4187_04630 PF00485 Phosphoribulokinase / Uridine kinase family E4187_04635 PF06794 Uncharacterised protein family (UPF0270) E4187_04645 PF00561 alpha/beta hydrolase fold E4187_04650 PF01584 CheW-like domain E4187_04650 PF00072 Response regulator receiver domain E4187_04660 PF09526 Probable metal-binding protein (DUF2387) E4187_04665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4187_04670 PF04102 SlyX E4187_04680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4187_04680 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E4187_04685 PF00158 Sigma-54 interaction domain E4187_04685 PF00072 Response regulator receiver domain E4187_04685 PF02954 Bacterial regulatory protein, Fis family E4187_04705 PF02872 5'-nucleotidase, C-terminal domain E4187_04705 PF00149 Calcineurin-like phosphoesterase E4187_04715 PF03796 DnaB-like helicase C terminal domain E4187_04715 PF00772 DnaB-like helicase N terminal domain E4187_04720 PF03796 DnaB-like helicase C terminal domain E4187_04720 PF00772 DnaB-like helicase N terminal domain E4187_04725 PF01168 Alanine racemase, N-terminal domain E4187_04725 PF00842 Alanine racemase, C-terminal domain E4187_04730 PF00171 Aldehyde dehydrogenase family E4187_04730 PF01619 Proline dehydrogenase E4187_04730 PF14850 DNA-binding domain of Proline dehydrogenase E4187_04730 PF18327 Proline utilization A proline dehydrogenase N-terminal domain E4187_04740 PF10415 Fumarase C C-terminus E4187_04740 PF00206 Lyase E4187_04745 PF03575 Peptidase family S51 E4187_04750 PF00072 Response regulator receiver domain E4187_04750 PF00196 Bacterial regulatory proteins, luxR family E4187_04755 PF00989 PAS fold E4187_04755 PF00512 His Kinase A (phospho-acceptor) domain E4187_04755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_04760 PF13247 4Fe-4S dicluster domain E4187_04765 PF03916 Polysulphide reductase, NrfD E4187_04770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E4187_04770 PF00384 Molybdopterin oxidoreductase E4187_04770 PF01568 Molydopterin dinucleotide binding domain E4187_04780 PF00989 PAS fold E4187_04780 PF00563 EAL domain E4187_04780 PF01590 GAF domain E4187_04780 PF00990 Diguanylate cyclase, GGDEF domain E4187_04810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_04810 PF03466 LysR substrate binding domain E4187_04815 PF01810 LysE type translocator E4187_04825 PF12392 Collagenase E4187_04825 PF01136 Peptidase family U32 E4187_04835 PF06906 Protein of unknown function (DUF1272) E4187_04845 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E4187_04845 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E4187_04855 PF02074 Carboxypeptidase Taq (M32) metallopeptidase E4187_04880 PF00106 short chain dehydrogenase E4187_04885 PF03573 outer membrane porin, OprD family E4187_04890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_04900 PF02447 GntP family permease E4187_04905 PF01370 NAD dependent epimerase/dehydratase family E4187_04910 PF01261 Xylose isomerase-like TIM barrel E4187_04915 PF00596 Class II Aldolase and Adducin N-terminal domain E4187_04920 PF17042 Nucleotide-binding C-terminal domain E4187_04920 PF07005 Sugar-binding N-terminal domain E4187_04925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E4187_04925 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E4187_04930 PF08220 DeoR-like helix-turn-helix domain E4187_04930 PF00455 DeoR C terminal sensor domain E4187_04940 PF07995 Glucose / Sorbosone dehydrogenase E4187_04950 PF03976 Polyphosphate kinase 2 (PPK2) E4187_04955 PF00356 Bacterial regulatory proteins, lacI family E4187_04975 PF00528 Binding-protein-dependent transport system inner membrane component E4187_04980 PF00528 Binding-protein-dependent transport system inner membrane component E4187_04985 PF00005 ABC transporter E4187_04985 PF17912 MalK OB fold domain E4187_04990 PF04616 Glycosyl hydrolases family 43 E4187_04990 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain E4187_04995 PF13358 DDE superfamily endonuclease E4187_04995 PF13592 Winged helix-turn helix E4187_05005 PF02264 LamB porin E4187_05010 PF13808 DDE_Tnp_1-associated E4187_05010 PF01609 Transposase DDE domain E4187_05015 PF02264 LamB porin E4187_05040 PF00800 Prephenate dehydratase E4187_05040 PF01817 Chorismate mutase type II E4187_05065 PF08349 Protein of unknown function (DUF1722) E4187_05070 PF13411 MerR HTH family regulatory protein E4187_05075 PF03441 FAD binding domain of DNA photolyase E4187_05075 PF00875 DNA photolyase E4187_05085 PF00106 short chain dehydrogenase E4187_05125 PF00210 Ferritin-like domain E4187_05130 PF03063 Prismane/CO dehydrogenase family E4187_05135 PF00111 2Fe-2S iron-sulfur cluster binding domain E4187_05135 PF00970 Oxidoreductase FAD-binding domain E4187_05135 PF00175 Oxidoreductase NAD-binding domain E4187_05140 PF01370 NAD dependent epimerase/dehydratase family E4187_05170 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E4187_05170 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E4187_05180 PF01758 Sodium Bile acid symporter family E4187_05185 PF03960 ArsC family E4187_05190 PF04542 Sigma-70 region 2 E4187_05190 PF04545 Sigma-70, region 4 E4187_05215 PF01740 STAS domain E4187_05215 PF00916 Sulfate permease family E4187_05220 PF00196 Bacterial regulatory proteins, luxR family E4187_05220 PF03472 Autoinducer binding domain E4187_05225 PF05638 Type VI secretion system effector, Hcp E4187_05235 PF04717 Type VI secretion system, phage-baseplate injector E4187_05250 PF01609 Transposase DDE domain E4187_05250 PF05598 Transposase domain (DUF772) E4187_05255 PF13592 Winged helix-turn helix E4187_05255 PF13358 DDE superfamily endonuclease E4187_05265 PF01965 DJ-1/PfpI family E4187_05270 PF02558 Ketopantoate reductase PanE/ApbA E4187_05270 PF08546 Ketopantoate reductase PanE/ApbA C terminal E4187_05275 PF04461 Protein of unknown function (DUF520) E4187_05280 PF03502 Nucleoside-specific channel-forming protein, Tsx E4187_05285 PF07690 Major Facilitator Superfamily E4187_05295 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E4187_05305 PF05175 Methyltransferase small domain E4187_05310 PF01722 BolA-like protein E4187_05315 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) E4187_05315 PF11973 NQRA C-terminal domain E4187_05320 PF03116 NQR2, RnfD, RnfE family E4187_05325 PF04205 FMN-binding domain E4187_05330 PF02508 Rnf-Nqr subunit, membrane protein E4187_05335 PF02508 Rnf-Nqr subunit, membrane protein E4187_05340 PF00970 Oxidoreductase FAD-binding domain E4187_05340 PF00111 2Fe-2S iron-sulfur cluster binding domain E4187_05340 PF00175 Oxidoreductase NAD-binding domain E4187_05345 PF02424 ApbE family E4187_05360 PF00817 impB/mucB/samB family E4187_05360 PF11798 IMS family HHH motif E4187_05360 PF11799 impB/mucB/samB family C-terminal domain E4187_05365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_05365 PF00672 HAMP domain E4187_05370 PF03466 LysR substrate binding domain E4187_05370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_05380 PF04241 Protein of unknown function (DUF423) E4187_05385 PF18125 RlmM ferredoxin-like domain E4187_05385 PF01728 FtsJ-like methyltransferase E4187_05395 PF00180 Isocitrate/isopropylmalate dehydrogenase E4187_05395 PF18324 Hypothetical protein TT1725 E4187_05400 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E4187_05400 PF01367 5'-3' exonuclease, C-terminal SAM fold E4187_05405 PF03641 Possible lysine decarboxylase E4187_05405 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases E4187_05405 PF11892 Domain of unknown function (DUF3412) E4187_05410 PF00990 Diguanylate cyclase, GGDEF domain E4187_05420 PF14489 QueF-like protein E4187_05420 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term E4187_05425 PF07348 Syd protein (SUKH-2) E4187_05430 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) E4187_05455 PF04287 tRNA pseudouridine synthase C E4187_05460 PF00849 RNA pseudouridylate synthase E4187_05465 PF00258 Flavodoxin E4187_05470 PF02264 LamB porin E4187_05475 PF07148 Maltose operon periplasmic protein precursor (MalM) E4187_05480 PF02378 Phosphotransferase system, EIIC E4187_05480 PF00367 phosphotransferase system, EIIB E4187_05485 PF11944 Protein of unknown function (DUF3461) E4187_05490 PF00132 Bacterial transferase hexapeptide (six repeats) E4187_05490 PF14602 Hexapeptide repeat of succinyl-transferase E4187_05490 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal E4187_05495 PF08335 GlnD PII-uridylyltransferase E4187_05495 PF01966 HD domain E4187_05495 PF01909 Nucleotidyltransferase domain E4187_05495 PF01842 ACT domain E4187_05500 PF00557 Metallopeptidase family M24 E4187_05505 PF00318 Ribosomal protein S2 E4187_05510 PF00889 Elongation factor TS E4187_05515 PF00696 Amino acid kinase family E4187_05520 PF01765 Ribosome recycling factor E4187_05525 PF01255 Putative undecaprenyl diphosphate synthase E4187_05535 PF13288 DXP reductoisomerase C-terminal domain E4187_05535 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain E4187_05535 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase E4187_05540 PF17820 PDZ domain E4187_05540 PF02163 Peptidase family M50 E4187_05545 PF07244 Surface antigen variable number repeat E4187_05545 PF01103 Surface antigen E4187_05550 PF03938 Outer membrane protein (OmpH-like) E4187_05555 PF00132 Bacterial transferase hexapeptide (six repeats) E4187_05555 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD E4187_05560 PF07977 FabA-like domain E4187_05565 PF00132 Bacterial transferase hexapeptide (six repeats) E4187_05565 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 E4187_05570 PF02684 Lipid-A-disaccharide synthetase E4187_05575 PF01351 Ribonuclease HII E4187_05580 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E4187_05580 PF07733 Bacterial DNA polymerase III alpha NTPase domain E4187_05580 PF14579 Helix-hairpin-helix motif E4187_05580 PF01336 OB-fold nucleic acid binding domain E4187_05580 PF02811 PHP domain E4187_05585 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit E4187_05595 PF03466 LysR substrate binding domain E4187_05595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_05605 PF13520 Amino acid permease E4187_05610 PF13302 Acetyltransferase (GNAT) domain E4187_05625 PF05649 Peptidase family M13 E4187_05625 PF01431 Peptidase family M13 E4187_05630 PF11734 TilS substrate C-terminal domain E4187_05630 PF09179 TilS substrate binding domain E4187_05630 PF01171 PP-loop family E4187_05635 PF00990 Diguanylate cyclase, GGDEF domain E4187_05640 PF02080 TrkA-C domain E4187_05640 PF02254 TrkA-N domain E4187_05640 PF00999 Sodium/hydrogen exchanger family E4187_05665 PF00196 Bacterial regulatory proteins, luxR family E4187_05665 PF00072 Response regulator receiver domain E4187_05675 PF00128 Alpha amylase, catalytic domain E4187_05690 PF00535 Glycosyl transferase family 2 E4187_05705 PF01471 Putative peptidoglycan binding domain E4187_05705 PF03734 L,D-transpeptidase catalytic domain E4187_05710 PF05951 Bacterial protein of unknown function (DUF882) E4187_05720 PF03458 UPF0126 domain E4187_05730 PF06470 SMC proteins Flexible Hinge Domain E4187_05730 PF02463 RecF/RecN/SMC N terminal domain E4187_05735 PF04354 ZipA, C-terminal FtsZ-binding domain E4187_05740 PF00533 BRCA1 C Terminus (BRCT) domain E4187_05740 PF12826 Helix-hairpin-helix motif E4187_05740 PF03120 NAD-dependent DNA ligase OB-fold domain E4187_05740 PF03119 NAD-dependent DNA ligase C4 zinc finger domain E4187_05740 PF01653 NAD-dependent DNA ligase adenylation domain E4187_05750 PF13597 Anaerobic ribonucleoside-triphosphate reductase E4187_05750 PF03477 ATP cone domain E4187_05760 PF01679 Proteolipid membrane potential modulator E4187_05780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4187_05780 PF00529 HlyD membrane-fusion protein of T1SS E4187_05785 PF01047 MarR family E4187_05790 PF03390 2-hydroxycarboxylate transporter family E4187_05795 PF03949 Malic enzyme, NAD binding domain E4187_05795 PF00390 Malic enzyme, N-terminal domain E4187_05800 PF17203 Single cache domain 3 E4187_05800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_05800 PF00989 PAS fold E4187_05800 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain E4187_05805 PF00072 Response regulator receiver domain E4187_05805 PF12431 Transcriptional regulator E4187_05810 PF00892 EamA-like transporter family E4187_05820 PF00171 Aldehyde dehydrogenase family E4187_05825 PF01590 GAF domain E4187_05825 PF02954 Bacterial regulatory protein, Fis family E4187_05825 PF00158 Sigma-54 interaction domain E4187_05830 PF17158 Membrane-associated sensor, integral membrane domain E4187_05830 PF00990 Diguanylate cyclase, GGDEF domain E4187_05835 PF05598 Transposase domain (DUF772) E4187_05835 PF01609 Transposase DDE domain E4187_05840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4187_05845 PF00072 Response regulator receiver domain E4187_05845 PF00486 Transcriptional regulatory protein, C terminal E4187_05850 PF11808 Phosphate regulon sensor protein PhoR E4187_05850 PF00512 His Kinase A (phospho-acceptor) domain E4187_05850 PF00989 PAS fold E4187_05850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_05855 PF12849 PBP superfamily domain E4187_05860 PF01435 Peptidase family M48 E4187_05870 PF00480 ROK family E4187_05875 PF03932 CutC family E4187_05880 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E4187_05880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4187_05885 PF00005 ABC transporter E4187_05900 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4187_05905 PF00528 Binding-protein-dependent transport system inner membrane component E4187_05910 PF00528 Binding-protein-dependent transport system inner membrane component E4187_05915 PF00005 ABC transporter E4187_05925 PF00293 NUDIX domain E4187_05930 PF08534 Redoxin E4187_05935 PF01699 Sodium/calcium exchanger protein E4187_05940 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E4187_05940 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E4187_05945 PF01235 Sodium:alanine symporter family E4187_05955 PF00860 Permease family E4187_05960 PF00990 Diguanylate cyclase, GGDEF domain E4187_05960 PF00072 Response regulator receiver domain E4187_05965 PF10692 Protein of unknown function (DUF2498) E4187_05970 PF01554 MatE E4187_05975 PF12833 Helix-turn-helix domain E4187_05980 PF00390 Malic enzyme, N-terminal domain E4187_05980 PF03949 Malic enzyme, NAD binding domain E4187_05985 PF01389 OmpA-like transmembrane domain E4187_05985 PF00691 OmpA family E4187_05990 PF00691 OmpA family E4187_05990 PF01389 OmpA-like transmembrane domain E4187_05995 PF00691 OmpA family E4187_05995 PF01389 OmpA-like transmembrane domain E4187_06010 PF00209 Sodium:neurotransmitter symporter family E4187_06015 PF01734 Patatin-like phospholipase E4187_06020 PF00990 Diguanylate cyclase, GGDEF domain E4187_06020 PF05230 MASE2 domain E4187_06030 PF00873 AcrB/AcrD/AcrF family E4187_06035 PF11842 Domain of unknown function (DUF3362) E4187_06035 PF08497 Radical SAM N-terminal E4187_06035 PF04055 Radical SAM superfamily E4187_06045 PF01609 Transposase DDE domain E4187_06045 PF13808 DDE_Tnp_1-associated E4187_06075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E4187_06080 PF02075 Crossover junction endodeoxyribonuclease RuvC E4187_06085 PF00230 Major intrinsic protein E4187_06090 PF01551 Peptidase family M23 E4187_06090 PF01464 Transglycosylase SLT domain E4187_06090 PF10145 Phage-related minor tail protein E4187_06105 PF13091 PLD-like domain E4187_06105 PF13396 Phospholipase_D-nuclease N-terminal E4187_06115 PF00551 Formyl transferase E4187_06115 PF01842 ACT domain E4187_06120 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase E4187_06130 PF00085 Thioredoxin E4187_06135 PF01648 4'-phosphopantetheinyl transferase superfamily E4187_06140 PF00877 NlpC/P60 family E4187_06145 PF05971 RNA methyltransferase E4187_06150 PF01575 MaoC like domain E4187_06160 PF01476 LysM domain E4187_06160 PF03734 L,D-transpeptidase catalytic domain E4187_06160 PF17969 L,D-transpeptidase C-terminal domain E4187_06170 PF13592 Winged helix-turn helix E4187_06170 PF13358 DDE superfamily endonuclease E4187_06175 PF01380 SIS domain E4187_06175 PF01418 Helix-turn-helix domain, rpiR family E4187_06180 PF12801 4Fe-4S binding domain E4187_06180 PF04205 FMN-binding domain E4187_06185 PF00116 Cytochrome C oxidase subunit II, periplasmic domain E4187_06185 PF18764 Nitrous oxide reductase propeller repeat E4187_06185 PF18793 Nitrous oxide reductase propeller repeat 2 E4187_06190 PF05048 Periplasmic copper-binding protein (NosD) E4187_06195 PF00005 ABC transporter E4187_06200 PF12679 ABC-2 family transporter protein E4187_06205 PF05573 NosL E4187_06210 PF02416 mttA/Hcf106 family E4187_06215 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E4187_06235 PF07690 Major Facilitator Superfamily E4187_06245 PF02129 X-Pro dipeptidyl-peptidase (S15 family) E4187_06250 PF03466 LysR substrate binding domain E4187_06250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_06280 PF10725 Protein of unknown function (DUF2517) E4187_06285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_06285 PF00512 His Kinase A (phospho-acceptor) domain E4187_06285 PF01627 Hpt domain E4187_06285 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4187_06285 PF00072 Response regulator receiver domain E4187_06290 PF00665 Integrase core domain E4187_06295 PF01695 IstB-like ATP binding protein E4187_06305 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E4187_06310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4187_06310 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E4187_06315 PF02690 Na+/Pi-cotransporter E4187_06325 PF13520 Amino acid permease E4187_06335 PF00324 Amino acid permease E4187_06340 PF00202 Aminotransferase class-III E4187_06345 PF00171 Aldehyde dehydrogenase family E4187_06350 PF07883 Cupin domain E4187_06350 PF01381 Helix-turn-helix E4187_06355 PF01266 FAD dependent oxidoreductase E4187_06370 PF04381 Putative exonuclease, RdgC E4187_06375 PF13673 Acetyltransferase (GNAT) domain E4187_06380 PF00149 Calcineurin-like phosphoesterase E4187_06380 PF12320 Type 5 capsule protein repressor C-terminal domain E4187_06390 PF01292 Prokaryotic cytochrome b561 E4187_06395 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E4187_06400 PF02896 PEP-utilising enzyme, TIM barrel domain E4187_06400 PF00391 PEP-utilising enzyme, mobile domain E4187_06400 PF05524 PEP-utilising enzyme, N-terminal E4187_06405 PF00381 PTS HPr component phosphorylation site E4187_06410 PF00291 Pyridoxal-phosphate dependent enzyme E4187_06415 PF01434 Peptidase family M41 E4187_06415 PF17862 AAA+ lid domain E4187_06415 PF00004 ATPase family associated with various cellular activities (AAA) E4187_06425 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E4187_06425 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4187_06430 PF18389 TrmO C-terminal domain E4187_06430 PF01980 tRNA-methyltransferase O E4187_06450 PF00664 ABC transporter transmembrane region E4187_06450 PF00005 ABC transporter E4187_06455 PF00005 ABC transporter E4187_06455 PF00664 ABC transporter transmembrane region E4187_06470 PF00486 Transcriptional regulatory protein, C terminal E4187_06470 PF00072 Response regulator receiver domain E4187_06480 PF03737 Aldolase/RraA E4187_06495 PF01546 Peptidase family M20/M25/M40 E4187_06515 PF13508 Acetyltransferase (GNAT) domain E4187_06535 PF01668 SmpB protein E4187_06540 PF03364 Polyketide cyclase / dehydrase and lipid transport E4187_06555 PF13006 Insertion element 4 transposase N-terminal E4187_06555 PF01609 Transposase DDE domain E4187_06565 PF04355 SmpA / OmlA family E4187_06570 PF01048 Phosphorylase superfamily E4187_06575 PF00849 RNA pseudouridylate synthase E4187_06580 PF01156 Inosine-uridine preferring nucleoside hydrolase E4187_06595 PF07509 Protein of unknown function (DUF1523) E4187_06600 PF12729 Four helix bundle sensory module for signal transduction E4187_06600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_06600 PF00672 HAMP domain E4187_06605 PF01810 LysE type translocator E4187_06610 PF03471 Transporter associated domain E4187_06610 PF00999 Sodium/hydrogen exchanger family E4187_06610 PF02080 TrkA-C domain E4187_06620 PF02080 TrkA-C domain E4187_06620 PF00999 Sodium/hydrogen exchanger family E4187_06620 PF03471 Transporter associated domain E4187_06630 PF02557 D-alanyl-D-alanine carboxypeptidase E4187_06635 PF07687 Peptidase dimerisation domain E4187_06635 PF01546 Peptidase family M20/M25/M40 E4187_06640 PF03960 ArsC family E4187_06655 PF03605 Anaerobic c4-dicarboxylate membrane transporter E4187_06665 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4187_06670 PF00106 short chain dehydrogenase E4187_06675 PF02801 Beta-ketoacyl synthase, C-terminal domain E4187_06675 PF08659 KR domain E4187_06675 PF00698 Acyl transferase domain E4187_06675 PF00550 Phosphopantetheine attachment site E4187_06675 PF16197 Ketoacyl-synthetase C-terminal extension E4187_06675 PF14765 Polyketide synthase dehydratase E4187_06675 PF00109 Beta-ketoacyl synthase, N-terminal domain E4187_06675 PF08240 Alcohol dehydrogenase GroES-like domain E4187_06680 PF00152 tRNA synthetases class II (D, K and N) E4187_06680 PF01336 OB-fold nucleic acid binding domain E4187_06695 PF00202 Aminotransferase class-III E4187_06700 PF04055 Radical SAM superfamily E4187_06700 PF06968 Biotin and Thiamin Synthesis associated domain E4187_06705 PF00155 Aminotransferase class I and II E4187_06710 PF12697 Alpha/beta hydrolase family E4187_06710 PF08241 Methyltransferase domain E4187_06720 PF01435 Peptidase family M48 E4187_06725 PF03476 MOSC N-terminal beta barrel domain E4187_06725 PF03473 MOSC domain E4187_06725 PF03473 MOSC domain E4187_06725 PF00111 2Fe-2S iron-sulfur cluster binding domain E4187_06725 PF00111 2Fe-2S iron-sulfur cluster binding domain E4187_06725 PF03476 MOSC N-terminal beta barrel domain E4187_06730 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E4187_06730 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4187_06730 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4187_06735 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E4187_06735 PF10371 Domain of unknown function E4187_06735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4187_06735 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E4187_06735 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E4187_06745 PF04325 Protein of unknown function (DUF465) E4187_06755 PF01554 MatE E4187_06775 PF00291 Pyridoxal-phosphate dependent enzyme E4187_06780 PF00465 Iron-containing alcohol dehydrogenase E4187_06790 PF17932 Tetracyclin repressor-like, C-terminal domain E4187_06790 PF00440 Bacterial regulatory proteins, tetR family E4187_06795 PF00171 Aldehyde dehydrogenase family E4187_06805 PF00877 NlpC/P60 family E4187_06810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_06810 PF03466 LysR substrate binding domain E4187_06830 PF08003 Protein of unknown function (DUF1698) E4187_06835 PF13649 Methyltransferase domain E4187_06840 PF01904 Protein of unknown function DUF72 E4187_06850 PF02938 GAD domain E4187_06850 PF00152 tRNA synthetases class II (D, K and N) E4187_06850 PF01336 OB-fold nucleic acid binding domain E4187_06855 PF01709 Transcriptional regulator E4187_06860 PF08019 Phosphoethanolamine transferase EptA/EptB E4187_06860 PF00884 Sulfatase E4187_06865 PF00480 ROK family E4187_06865 PF01047 MarR family E4187_06870 PF01979 Amidohydrolase family E4187_06875 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase E4187_06880 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E4187_06880 PF00367 phosphotransferase system, EIIB E4187_06880 PF02378 Phosphotransferase system, EIIC E4187_06885 PF02838 Glycosyl hydrolase family 20, domain 2 E4187_06885 PF00728 Glycosyl hydrolase family 20, catalytic domain E4187_06885 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain E4187_06885 PF03173 Putative carbohydrate binding domain E4187_06890 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain E4187_06890 PF00749 tRNA synthetases class I (E and Q), catalytic domain E4187_06895 PF01475 Ferric uptake regulator family E4187_06905 PF00258 Flavodoxin E4187_06910 PF01402 Ribbon-helix-helix protein, copG family E4187_06920 PF12697 Alpha/beta hydrolase family E4187_06925 PF03925 SeqA protein C-terminal domain E4187_06925 PF17206 SeqA protein N-terminal domain E4187_06930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4187_06930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4187_06930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4187_06930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4187_06940 PF01047 MarR family E4187_06945 PF13406 Transglycosylase SLT domain E4187_06950 PF01066 CDP-alcohol phosphatidyltransferase E4187_06955 PF00005 ABC transporter E4187_06965 PF13416 Bacterial extracellular solute-binding protein E4187_06970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4187_06970 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4187_06970 PF00403 Heavy-metal-associated domain E4187_06975 PF02627 Carboxymuconolactone decarboxylase family E4187_06995 PF01103 Surface antigen E4187_06995 PF07244 Surface antigen variable number repeat E4187_06995 PF17243 POTRA domain TamA domain 1 E4187_07000 PF04357 TamB, inner membrane protein subunit of TAM complex E4187_07020 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein E4187_07025 PF00990 Diguanylate cyclase, GGDEF domain E4187_07025 PF00563 EAL domain E4187_07025 PF03707 Bacterial signalling protein N terminal repeat E4187_07030 PF14718 Soluble lytic murein transglycosylase L domain E4187_07030 PF01464 Transglycosylase SLT domain E4187_07035 PF00356 Bacterial regulatory proteins, lacI family E4187_07045 PF03061 Thioesterase superfamily E4187_07055 PF03372 Endonuclease/Exonuclease/phosphatase family E4187_07060 PF01476 LysM domain E4187_07060 PF01464 Transglycosylase SLT domain E4187_07065 PF16123 Hydroxyacylglutathione hydrolase C-terminus E4187_07065 PF00753 Metallo-beta-lactamase superfamily E4187_07070 PF08241 Methyltransferase domain E4187_07075 PF00075 RNase H E4187_07080 PF00929 Exonuclease E4187_07090 PF11849 Domain of unknown function (DUF3369) E4187_07095 PF02770 Acyl-CoA dehydrogenase, middle domain E4187_07095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E4187_07095 PF09317 Domain of unknown function (DUF1974) E4187_07095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E4187_07100 PF13580 SIS domain E4187_07105 PF13230 Glutamine amidotransferases class-II E4187_07115 PF01933 Uncharacterised protein family UPF0052 E4187_07125 PF17149 Periplasmic sensor domain found in signal transduction proteins E4187_07125 PF00672 HAMP domain E4187_07125 PF00512 His Kinase A (phospho-acceptor) domain E4187_07125 PF01627 Hpt domain E4187_07125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_07125 PF00072 Response regulator receiver domain E4187_07140 PF00072 Response regulator receiver domain E4187_07140 PF00196 Bacterial regulatory proteins, luxR family E4187_07145 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term E4187_07145 PF07730 Histidine kinase E4187_07145 PF00672 HAMP domain E4187_07145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_07150 PF04055 Radical SAM superfamily E4187_07150 PF06463 Molybdenum Cofactor Synthesis C E4187_07155 PF13187 4Fe-4S dicluster domain E4187_07155 PF12838 4Fe-4S dicluster domain E4187_07165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E4187_07165 PF00384 Molybdopterin oxidoreductase E4187_07165 PF01568 Molydopterin dinucleotide binding domain E4187_07165 PF10518 TAT (twin-arginine translocation) pathway signal sequence E4187_07170 PF12800 4Fe-4S binding domain E4187_07170 PF12838 4Fe-4S dicluster domain E4187_07175 PF12837 4Fe-4S binding domain E4187_07175 PF12801 4Fe-4S binding domain E4187_07180 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) E4187_07185 PF03264 NapC/NirT cytochrome c family, N-terminal region E4187_07190 PF00994 Probable molybdopterin binding domain E4187_07195 PF01967 MoaC family E4187_07200 PF02597 ThiS family E4187_07205 PF02391 MoaE protein E4187_07215 PF00528 Binding-protein-dependent transport system inner membrane component E4187_07220 PF03459 TOBE domain E4187_07220 PF00005 ABC transporter E4187_07225 PF00561 alpha/beta hydrolase fold E4187_07230 PF00899 ThiF family E4187_07235 PF03453 MoeA N-terminal region (domain I and II) E4187_07235 PF00994 Probable molybdopterin binding domain E4187_07235 PF03454 MoeA C-terminal region (domain IV) E4187_07240 PF01227 GTP cyclohydrolase I E4187_07245 PF00672 HAMP domain E4187_07245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_07245 PF17200 Single Cache domain 2 E4187_07250 PF01268 Formate--tetrahydrofolate ligase E4187_07260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_07260 PF03466 LysR substrate binding domain E4187_07265 PF04264 YceI-like domain E4187_07275 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain E4187_07275 PF05221 S-adenosyl-L-homocysteine hydrolase E4187_07290 PF01546 Peptidase family M20/M25/M40 E4187_07290 PF07687 Peptidase dimerisation domain E4187_07305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E4187_07305 PF17810 Arginine decarboxylase helical bundle domain E4187_07305 PF17944 Arginine decarboxylase C-terminal helical extension E4187_07320 PF03707 Bacterial signalling protein N terminal repeat E4187_07320 PF00563 EAL domain E4187_07320 PF00990 Diguanylate cyclase, GGDEF domain E4187_07325 PF00300 Histidine phosphatase superfamily (branch 1) E4187_07330 PF03852 DNA mismatch endonuclease Vsr E4187_07335 PF00145 C-5 cytosine-specific DNA methylase E4187_07340 PF08676 MutL C terminal dimerisation domain E4187_07340 PF01119 DNA mismatch repair protein, C-terminal domain E4187_07360 PF13808 DDE_Tnp_1-associated E4187_07360 PF01609 Transposase DDE domain E4187_07365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4187_07375 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E4187_07375 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E4187_07380 PF01479 S4 domain E4187_07380 PF00849 RNA pseudouridylate synthase E4187_07385 PF07690 Major Facilitator Superfamily E4187_07395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_07395 PF03466 LysR substrate binding domain E4187_07405 PF10689 Protein of unknown function (DUF2496) E4187_07420 PF00892 EamA-like transporter family E4187_07425 PF04391 Protein of unknown function (DUF533) E4187_07440 PF08281 Sigma-70, region 4 E4187_07440 PF04542 Sigma-70 region 2 E4187_07455 PF00392 Bacterial regulatory proteins, gntR family E4187_07455 PF00155 Aminotransferase class I and II E4187_07460 PF01654 Cytochrome bd terminal oxidase subunit I E4187_07465 PF02322 Cytochrome bd terminal oxidase subunit II E4187_07475 PF07690 Major Facilitator Superfamily E4187_07480 PF00248 Aldo/keto reductase family E4187_07500 PF03466 LysR substrate binding domain E4187_07500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_07505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4187_07505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4187_07510 PF00230 Major intrinsic protein E4187_07515 PF07690 Major Facilitator Superfamily E4187_07520 PF00455 DeoR C terminal sensor domain E4187_07520 PF08220 DeoR-like helix-turn-helix domain E4187_07525 PF16901 C-terminal domain of alpha-glycerophosphate oxidase E4187_07525 PF01266 FAD dependent oxidoreductase E4187_07530 PF03009 Glycerophosphoryl diester phosphodiesterase family E4187_07535 PF00793 DAHP synthetase I family E4187_07540 PF01817 Chorismate mutase type II E4187_07540 PF02153 Prephenate dehydrogenase E4187_07545 PF03466 LysR substrate binding domain E4187_07545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_07550 PF04219 Protein of unknown function, DUF E4187_07555 PF03974 Ecotin E4187_07575 PF00326 Prolyl oligopeptidase family E4187_07575 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4187_07580 PF00593 TonB dependent receptor E4187_07580 PF07715 TonB-dependent Receptor Plug Domain E4187_07585 PF11893 Domain of unknown function (DUF3413) E4187_07585 PF00884 Sulfatase E4187_07590 PF07208 Protein of unknown function (DUF1414) E4187_07595 PF04245 37-kD nucleoid-associated bacterial protein E4187_07600 PF01547 Bacterial extracellular solute-binding protein E4187_07605 PF14785 Maltose transport system permease protein MalF P2 domain E4187_07605 PF00528 Binding-protein-dependent transport system inner membrane component E4187_07610 PF00528 Binding-protein-dependent transport system inner membrane component E4187_07615 PF08402 TOBE domain E4187_07615 PF00005 ABC transporter E4187_07620 PF03976 Polyphosphate kinase 2 (PPK2) E4187_07625 PF00561 alpha/beta hydrolase fold E4187_07635 PF01594 AI-2E family transporter E4187_07645 PF01435 Peptidase family M48 E4187_07645 PF13181 Tetratricopeptide repeat E4187_07650 PF00578 AhpC/TSA family E4187_07655 PF03960 ArsC family E4187_07665 PF01979 Amidohydrolase family E4187_07670 PF04336 Acyl carrier protein phosphodiesterase E4187_07680 PF01979 Amidohydrolase family E4187_07685 PF03956 Lysine exporter LysO E4187_07690 PF00005 ABC transporter E4187_07695 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4187_07700 PF00528 Binding-protein-dependent transport system inner membrane component E4187_07705 PF00528 Binding-protein-dependent transport system inner membrane component E4187_07715 PF04055 Radical SAM superfamily E4187_07720 PF00563 EAL domain E4187_07720 PF00990 Diguanylate cyclase, GGDEF domain E4187_07720 PF03707 Bacterial signalling protein N terminal repeat E4187_07725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4187_07725 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4187_07745 PF07690 Major Facilitator Superfamily E4187_07755 PF12323 Helix-turn-helix domain E4187_07765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4187_07765 PF00529 HlyD membrane-fusion protein of T1SS E4187_07770 PF02321 Outer membrane efflux protein E4187_07785 PF17962 Bacterial macroglobulin domain 6 E4187_07785 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain E4187_07785 PF07678 A-macroglobulin TED domain E4187_07785 PF01835 MG2 domain E4187_07785 PF11974 Bacterial alpha-2-macroglobulin MG3 domain E4187_07785 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain E4187_07785 PF00207 Alpha-2-macroglobulin family E4187_07785 PF07703 Alpha-2-macroglobulin bait region domain E4187_07785 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain E4187_07790 PF06832 Penicillin-Binding Protein C-terminus Family E4187_07790 PF00905 Penicillin binding protein transpeptidase domain E4187_07790 PF00912 Transglycosylase E4187_07810 PF02926 THUMP domain E4187_07810 PF02568 Thiamine biosynthesis protein (ThiI) E4187_07820 PF03458 UPF0126 domain E4187_07825 PF00669 Bacterial flagellin N-terminal helical region E4187_07825 PF00700 Bacterial flagellin C-terminal helical region E4187_07825 PF07196 Flagellin hook IN motif E4187_07830 PF03646 FlaG protein E4187_07835 PF07196 Flagellin hook IN motif E4187_07835 PF07195 Flagellar hook-associated protein 2 C-terminus E4187_07835 PF02465 Flagellar hook-associated protein 2 N-terminus E4187_07840 PF02561 Flagellar protein FliS E4187_07865 PF01497 Periplasmic binding protein E4187_07875 PF01048 Phosphorylase superfamily E4187_07880 PF02535 ZIP Zinc transporter E4187_07890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4187_07895 PF00730 HhH-GPD superfamily base excision DNA repair protein E4187_07895 PF10576 Iron-sulfur binding domain of endonuclease III E4187_07895 PF00633 Helix-hairpin-helix motif E4187_07900 PF02508 Rnf-Nqr subunit, membrane protein E4187_07905 PF04205 FMN-binding domain E4187_07910 PF03116 NQR2, RnfD, RnfE family E4187_07915 PF10531 SLBB domain E4187_07915 PF13375 RnfC Barrel sandwich hybrid domain E4187_07915 PF12838 4Fe-4S dicluster domain E4187_07915 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4187_07920 PF04060 Putative Fe-S cluster E4187_07925 PF02508 Rnf-Nqr subunit, membrane protein E4187_07940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_07940 PF13426 PAS domain E4187_07940 PF08447 PAS fold E4187_07950 PF07055 Enoyl reductase FAD binding domain E4187_07950 PF12241 Trans-2-enoyl-CoA reductase catalytic region E4187_07950 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase E4187_07955 PF03606 C4-dicarboxylate anaerobic carrier E4187_07960 PF00155 Aminotransferase class I and II E4187_07970 PF00462 Glutaredoxin E4187_07975 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family E4187_07980 PF00271 Helicase conserved C-terminal domain E4187_07980 PF04851 Type III restriction enzyme, res subunit E4187_07985 PF00529 HlyD membrane-fusion protein of T1SS E4187_07985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4187_07990 PF11742 Protein of unknown function (DUF3302) E4187_07995 PF12794 Mechanosensitive ion channel inner membrane domain 1 E4187_07995 PF00924 Mechanosensitive ion channel E4187_07995 PF12795 Mechanosensitive ion channel porin domain E4187_08000 PF02554 Carbon starvation protein CstA E4187_08005 PF04397 LytTr DNA-binding domain E4187_08005 PF00072 Response regulator receiver domain E4187_08010 PF07694 5TMR of 5TMR-LYT E4187_08010 PF06580 Histidine kinase E4187_08015 PF11871 Domain of unknown function (DUF3391) E4187_08015 PF01966 HD domain E4187_08020 PF00465 Iron-containing alcohol dehydrogenase E4187_08020 PF00171 Aldehyde dehydrogenase family E4187_08025 PF01914 MarC family integral membrane protein E4187_08030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4187_08035 PF00528 Binding-protein-dependent transport system inner membrane component E4187_08040 PF00528 Binding-protein-dependent transport system inner membrane component E4187_08040 PF12911 N-terminal TM domain of oligopeptide transport permease C E4187_08045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4187_08045 PF00005 ABC transporter E4187_08050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4187_08050 PF00005 ABC transporter E4187_08055 PF03741 Integral membrane protein TerC family E4187_08060 PF01168 Alanine racemase, N-terminal domain E4187_08060 PF00842 Alanine racemase, C-terminal domain E4187_08070 PF00375 Sodium:dicarboxylate symporter family E4187_08085 PF01979 Amidohydrolase family E4187_08095 PF02743 Cache domain E4187_08095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_08095 PF00672 HAMP domain E4187_08100 PF01230 HIT domain E4187_08135 PF02355 Protein export membrane protein E4187_08135 PF13721 SecD export protein N-terminal TM region E4187_08135 PF07549 SecD/SecF GG Motif E4187_08140 PF02355 Protein export membrane protein E4187_08140 PF07549 SecD/SecF GG Motif E4187_08150 PF05661 Protein of unknown function (DUF808) E4187_08155 PF08439 Oligopeptidase F E4187_08155 PF01432 Peptidase family M3 E4187_08160 PF08439 Oligopeptidase F E4187_08160 PF01432 Peptidase family M3 E4187_08165 PF05728 Uncharacterised protein family (UPF0227) E4187_08170 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4187_08180 PF01548 Transposase E4187_08180 PF02371 Transposase IS116/IS110/IS902 family E4187_08185 PF01906 Putative heavy-metal-binding E4187_08190 PF02016 LD-carboxypeptidase N-terminal domain E4187_08190 PF17676 LD-carboxypeptidase C-terminal domain E4187_08195 PF00884 Sulfatase E4187_08205 PF00696 Amino acid kinase family E4187_08205 PF01842 ACT domain E4187_08215 PF00696 Amino acid kinase family E4187_08215 PF00583 Acetyltransferase (GNAT) family E4187_08220 PF01625 Peptide methionine sulfoxide reductase E4187_08235 PF04237 YjbR E4187_08245 PF03466 LysR substrate binding domain E4187_08245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_08250 PF02652 L-lactate permease E4187_08255 PF02754 Cysteine-rich domain E4187_08260 PF02589 LUD domain E4187_08260 PF13183 4Fe-4S dicluster domain E4187_08260 PF11870 Domain of unknown function (DUF3390) E4187_08265 PF02589 LUD domain E4187_08270 PF01565 FAD binding domain E4187_08270 PF02913 FAD linked oxidases, C-terminal domain E4187_08305 PF01609 Transposase DDE domain E4187_08305 PF05598 Transposase domain (DUF772) E4187_08325 PF00005 ABC transporter E4187_08335 PF03600 Citrate transporter E4187_08345 PF07690 Major Facilitator Superfamily E4187_08365 PF01593 Flavin containing amine oxidoreductase E4187_08370 PF03239 Iron permease FTR1 family E4187_08400 PF14403 Circularly permuted ATP-grasp type 2 E4187_08400 PF04168 A predicted alpha-helical domain with a conserved ER motif. E4187_08405 PF14403 Circularly permuted ATP-grasp type 2 E4187_08425 PF00916 Sulfate permease family E4187_08425 PF01740 STAS domain E4187_08440 PF01609 Transposase DDE domain E4187_08440 PF13808 DDE_Tnp_1-associated E4187_08450 PF05598 Transposase domain (DUF772) E4187_08450 PF01609 Transposase DDE domain E4187_08465 PF02627 Carboxymuconolactone decarboxylase family E4187_08475 PF00085 Thioredoxin E4187_08480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4187_08485 PF01323 DSBA-like thioredoxin domain E4187_08495 PF02899 Phage integrase, N-terminal SAM-like domain E4187_08495 PF00589 Phage integrase family E4187_08500 PF01609 Transposase DDE domain E4187_08500 PF05598 Transposase domain (DUF772) E4187_08510 PF01609 Transposase DDE domain E4187_08510 PF05598 Transposase domain (DUF772) E4187_08515 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal E4187_08515 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E4187_08520 PF13247 4Fe-4S dicluster domain E4187_08525 PF03916 Polysulphide reductase, NrfD E4187_08530 PF00374 Nickel-dependent hydrogenase E4187_08535 PF01750 Hydrogenase maturation protease E4187_08540 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE E4187_08545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4187_08550 PF00528 Binding-protein-dependent transport system inner membrane component E4187_08555 PF12911 N-terminal TM domain of oligopeptide transport permease C E4187_08555 PF00528 Binding-protein-dependent transport system inner membrane component E4187_08560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4187_08560 PF00005 ABC transporter E4187_08565 PF00005 ABC transporter E4187_08570 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4187_08575 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA E4187_08580 PF02769 AIR synthase related protein, C-terminal domain E4187_08580 PF00586 AIR synthase related protein, N-terminal domain E4187_08585 PF01924 Hydrogenase formation hypA family E4187_08590 PF01455 HupF/HypC family E4187_08595 PF07503 HypF finger E4187_08595 PF01300 Telomere recombination E4187_08595 PF17788 HypF Kae1-like domain E4187_08595 PF00708 Acylphosphatase E4187_08605 PF13662 Toprim domain E4187_08605 PF02132 RecR protein E4187_08610 PF00183 Hsp90 protein E4187_08610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_08615 PF05191 Adenylate kinase, active site lid E4187_08620 PF00762 Ferrochelatase E4187_08630 PF00294 pfkB family carbohydrate kinase E4187_08635 PF00672 HAMP domain E4187_08635 PF17200 Single Cache domain 2 E4187_08635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_08650 PF03707 Bacterial signalling protein N terminal repeat E4187_08650 PF00990 Diguanylate cyclase, GGDEF domain E4187_08650 PF00563 EAL domain E4187_08655 PF00483 Nucleotidyl transferase E4187_08665 PF07273 Protein of unknown function (DUF1439) E4187_08670 PF00425 chorismate binding enzyme E4187_08675 PF13193 AMP-binding enzyme C-terminal domain E4187_08675 PF00501 AMP-binding enzyme E4187_08680 PF00857 Isochorismatase family E4187_08680 PF00550 Phosphopantetheine attachment site E4187_08685 PF00975 Thioesterase domain E4187_08685 PF00550 Phosphopantetheine attachment site E4187_08685 PF00668 Condensation domain E4187_08685 PF13193 AMP-binding enzyme C-terminal domain E4187_08685 PF00501 AMP-binding enzyme E4187_08695 PF00501 AMP-binding enzyme E4187_08695 PF13193 AMP-binding enzyme C-terminal domain E4187_08695 PF00668 Condensation domain E4187_08695 PF07993 Male sterility protein E4187_08695 PF00550 Phosphopantetheine attachment site E4187_08700 PF00975 Thioesterase domain E4187_08700 PF00550 Phosphopantetheine attachment site E4187_08700 PF00668 Condensation domain E4187_08700 PF13193 AMP-binding enzyme C-terminal domain E4187_08700 PF00501 AMP-binding enzyme E4187_08705 PF01497 Periplasmic binding protein E4187_08710 PF17837 4'-phosphopantetheinyl transferase N-terminal domain E4187_08710 PF01648 4'-phosphopantetheinyl transferase superfamily E4187_08715 PF00005 ABC transporter E4187_08720 PF01032 FecCD transport family E4187_08725 PF01032 FecCD transport family E4187_08730 PF00593 TonB dependent receptor E4187_08730 PF07715 TonB-dependent Receptor Plug Domain E4187_08745 PF11143 Protein of unknown function (DUF2919) E4187_08750 PF01544 CorA-like Mg2+ transporter protein E4187_08765 PF01012 Electron transfer flavoprotein domain E4187_08770 PF01012 Electron transfer flavoprotein domain E4187_08770 PF00766 Electron transfer flavoprotein FAD-binding domain E4187_08775 PF00266 Aminotransferase class-V E4187_08780 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4187_08785 PF00793 DAHP synthetase I family E4187_08790 PF03741 Integral membrane protein TerC family E4187_08800 PF08891 YfcL protein E4187_08805 PF00501 AMP-binding enzyme E4187_08810 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E4187_08810 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region E4187_08815 PF04172 LrgB-like family E4187_08820 PF03788 LrgA family E4187_08835 PF00929 Exonuclease E4187_08835 PF08411 Exonuclease C-terminal E4187_08840 PF14659 Phage integrase, N-terminal SAM-like domain E4187_08840 PF13356 Arm DNA-binding domain E4187_08840 PF00589 Phage integrase family E4187_08875 PF04245 37-kD nucleoid-associated bacterial protein E4187_08920 PF09669 Phage regulatory protein Rha (Phage_pRha) E4187_08920 PF10549 ORF11CD3 domain E4187_08935 PF05866 Endodeoxyribonuclease RusA E4187_08980 PF03354 Phage Terminase E4187_09085 PF00149 Calcineurin-like phosphoesterase E4187_09090 PF09924 Uncharacterised conserved protein (DUF2156) E4187_09090 PF03706 Lysylphosphatidylglycerol synthase TM region E4187_09100 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4187_09105 PF00795 Carbon-nitrogen hydrolase E4187_09110 PF00155 Aminotransferase class I and II E4187_09115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_09115 PF03466 LysR substrate binding domain E4187_09120 PF11762 L-arabinose isomerase C-terminal domain E4187_09120 PF02610 L-arabinose isomerase E4187_09125 PF00596 Class II Aldolase and Adducin N-terminal domain E4187_09130 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4187_09135 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E4187_09140 PF00005 ABC transporter E4187_09145 PF02653 Branched-chain amino acid transport system / permease component E4187_09150 PF02311 AraC-like ligand binding domain E4187_09150 PF12833 Helix-turn-helix domain E4187_09155 PF00444 Ribosomal protein L36 E4187_09160 PF01197 Ribosomal protein L31 E4187_09165 PF03812 2-keto-3-deoxygluconate permease E4187_09170 PF04074 YhcH/YjgK/YiaL E4187_09175 PF01081 KDPG and KHG aldolase E4187_09180 PF00294 pfkB family carbohydrate kinase E4187_09185 PF09339 IclR helix-turn-helix domain E4187_09185 PF01614 Bacterial transcriptional regulator E4187_09190 PF10688 Bacterial inner membrane protein E4187_09200 PF04962 KduI/IolB family E4187_09215 PF01863 Protein of unknown function DUF45 E4187_09230 PF03606 C4-dicarboxylate anaerobic carrier E4187_09240 PF01266 FAD dependent oxidoreductase E4187_09240 PF05430 S-adenosyl-L-methionine-dependent methyltransferase E4187_09245 PF02801 Beta-ketoacyl synthase, C-terminal domain E4187_09245 PF00109 Beta-ketoacyl synthase, N-terminal domain E4187_09260 PF00285 Citrate synthase, C-terminal domain E4187_09265 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E4187_09270 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E4187_09275 PF02910 Fumarate reductase flavoprotein C-term E4187_09275 PF00890 FAD binding domain E4187_09280 PF13085 2Fe-2S iron-sulfur cluster binding domain E4187_09285 PF16078 2-oxoglutarate dehydrogenase N-terminus E4187_09285 PF00676 Dehydrogenase E1 component E4187_09285 PF16870 2-oxoglutarate dehydrogenase C-terminal E4187_09285 PF02779 Transketolase, pyrimidine binding domain E4187_09290 PF00364 Biotin-requiring enzyme E4187_09290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E4187_09290 PF02817 e3 binding domain E4187_09295 PF00549 CoA-ligase E4187_09295 PF08442 ATP-grasp domain E4187_09300 PF00549 CoA-ligase E4187_09300 PF02629 CoA binding domain E4187_09305 PF13006 Insertion element 4 transposase N-terminal E4187_09305 PF01609 Transposase DDE domain E4187_09315 PF03692 Putative zinc- or iron-chelating domain E4187_09320 PF02901 Pyruvate formate lyase-like E4187_09320 PF01228 Glycine radical E4187_09325 PF01226 Formate/nitrite transporter E4187_09330 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding E4187_09330 PF18381 YcaO cyclodehydratase C-terminal domain E4187_09340 PF01609 Transposase DDE domain E4187_09340 PF13006 Insertion element 4 transposase N-terminal E4187_09345 PF00893 Small Multidrug Resistance protein E4187_09350 PF01118 Semialdehyde dehydrogenase, NAD binding domain E4187_09350 PF02774 Semialdehyde dehydrogenase, dimerisation domain E4187_09355 PF00313 'Cold-shock' DNA-binding domain E4187_09360 PF02617 ATP-dependent Clp protease adaptor protein ClpS E4187_09365 PF17871 AAA lid domain E4187_09365 PF00004 ATPase family associated with various cellular activities (AAA) E4187_09365 PF10431 C-terminal, D2-small domain, of ClpB protein E4187_09365 PF02861 Clp amino terminal domain, pathogenicity island component E4187_09365 PF07724 AAA domain (Cdc48 subfamily) E4187_09370 PF01176 Translation initiation factor 1A / IF-1 E4187_09375 PF04377 Arginine-tRNA-protein transferase, C terminus E4187_09375 PF04376 Arginine-tRNA-protein transferase, N terminus E4187_09380 PF03588 Leucyl/phenylalanyl-tRNA protein transferase E4187_09385 PF05433 Glycine zipper 2TM domain E4187_09390 PF00990 Diguanylate cyclase, GGDEF domain E4187_09395 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4187_09400 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E4187_09400 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E4187_09405 PF01037 Lrp/AsnC ligand binding domain E4187_09410 PF17854 FtsK alpha domain E4187_09410 PF13491 4TM region of DNA translocase FtsK/SpoIIIE E4187_09410 PF01580 FtsK/SpoIIIE family E4187_09410 PF09397 Ftsk gamma domain E4187_09415 PF03548 Outer membrane lipoprotein carrier protein LolA E4187_09420 PF12002 MgsA AAA+ ATPase C terminal E4187_09420 PF16193 AAA C-terminal domain E4187_09420 PF00004 ATPase family associated with various cellular activities (AAA) E4187_09425 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4187_09425 PF02403 Seryl-tRNA synthetase N-terminal domain E4187_09430 PF02674 Colicin V production protein E4187_09435 PF00156 Phosphoribosyl transferase domain E4187_09440 PF00232 Glycosyl hydrolase family 1 E4187_09445 PF02378 Phosphotransferase system, EIIC E4187_09445 PF00367 phosphotransferase system, EIIB E4187_09450 PF00356 Bacterial regulatory proteins, lacI family E4187_09455 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) E4187_09460 PF00005 ABC transporter E4187_09465 PF00005 ABC transporter E4187_09465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4187_09470 PF00528 Binding-protein-dependent transport system inner membrane component E4187_09470 PF12911 N-terminal TM domain of oligopeptide transport permease C E4187_09475 PF00528 Binding-protein-dependent transport system inner membrane component E4187_09480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4187_09485 PF02954 Bacterial regulatory protein, Fis family E4187_09485 PF00158 Sigma-54 interaction domain E4187_09490 PF04012 PspA/IM30 family E4187_09495 PF06667 Phage shock protein B E4187_09505 PF04317 YcjX-like family, DUF463 E4187_09510 PF05128 Domain of unknown function (DUF697) E4187_09515 PF00351 Biopterin-dependent aromatic amino acid hydroxylase E4187_09520 PF01329 Pterin 4 alpha carbinolamine dehydratase E4187_09525 PF00158 Sigma-54 interaction domain E4187_09525 PF18024 Helix-turn-helix domain E4187_09530 PF13689 YfiR/HmsC-like E4187_09535 PF00990 Diguanylate cyclase, GGDEF domain E4187_09535 PF17152 Periplasmic sensor domain E4187_09540 PF00691 OmpA family E4187_09545 PF04055 Radical SAM superfamily E4187_09550 PF13742 OB-fold nucleic acid binding domain E4187_09550 PF02601 Exonuclease VII, large subunit E4187_09560 PF01373 Glycosyl hydrolase family 14 E4187_09560 PF00128 Alpha amylase, catalytic domain E4187_09560 PF03423 Carbohydrate binding domain (family 25) E4187_09570 PF00478 IMP dehydrogenase / GMP reductase domain E4187_09570 PF00571 CBS domain E4187_09575 PF00117 Glutamine amidotransferase class-I E4187_09575 PF02540 NAD synthase E4187_09575 PF00958 GMP synthase C terminal domain E4187_09595 PF05724 Thiopurine S-methyltransferase (TPMT) E4187_09600 PF00675 Insulinase (Peptidase family M16) E4187_09600 PF16187 Middle or third domain of peptidase_M16 E4187_09600 PF05193 Peptidase M16 inactive domain E4187_09605 PF00300 Histidine phosphatase superfamily (branch 1) E4187_09615 PF00892 EamA-like transporter family E4187_09620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4187_09625 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain E4187_09630 PF03461 TRCF domain E4187_09630 PF17757 UvrB interaction domain E4187_09630 PF00271 Helicase conserved C-terminal domain E4187_09630 PF02559 CarD-like/TRCF domain E4187_09630 PF00270 DEAD/DEAH box helicase E4187_09640 PF12704 MacB-like periplasmic core domain E4187_09640 PF02687 FtsX-like permease family E4187_09645 PF00005 ABC transporter E4187_09650 PF02687 FtsX-like permease family E4187_09650 PF12704 MacB-like periplasmic core domain E4187_09670 PF05697 Bacterial trigger factor protein (TF) E4187_09670 PF05698 Bacterial trigger factor protein (TF) C-terminus E4187_09670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4187_09675 PF00574 Clp protease E4187_09680 PF10431 C-terminal, D2-small domain, of ClpB protein E4187_09680 PF06689 ClpX C4-type zinc finger E4187_09680 PF07724 AAA domain (Cdc48 subfamily) E4187_09685 PF02190 ATP-dependent protease La (LON) substrate-binding domain E4187_09685 PF05362 Lon protease (S16) C-terminal proteolytic domain E4187_09685 PF00004 ATPase family associated with various cellular activities (AAA) E4187_09690 PF00216 Bacterial DNA-binding protein E4187_09695 PF13145 PPIC-type PPIASE domain E4187_09700 PF12848 ABC transporter E4187_09700 PF00005 ABC transporter E4187_09705 PF00474 Sodium:solute symporter family E4187_09710 PF04341 Protein of unknown function, DUF485 E4187_09715 PF07733 Bacterial DNA polymerase III alpha NTPase domain E4187_09715 PF00929 Exonuclease E4187_09715 PF02811 PHP domain E4187_09715 PF14579 Helix-hairpin-helix motif E4187_09715 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E4187_09725 PF00378 Enoyl-CoA hydratase/isomerase E4187_09730 PF01235 Sodium:alanine symporter family E4187_09735 PF00583 Acetyltransferase (GNAT) family E4187_09740 PF06167 Glucose-regulated metallo-peptidase M90 E4187_09745 PF01184 GPR1/FUN34/yaaH family E4187_09755 PF00376 MerR family regulatory protein E4187_09755 PF09278 MerR, DNA binding E4187_09760 PF00682 HMGL-like E4187_09765 PF00364 Biotin-requiring enzyme E4187_09765 PF00289 Biotin carboxylase, N-terminal domain E4187_09765 PF02785 Biotin carboxylase C-terminal domain E4187_09765 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E4187_09770 PF00378 Enoyl-CoA hydratase/isomerase E4187_09775 PF01039 Carboxyl transferase domain E4187_09780 PF02770 Acyl-CoA dehydrogenase, middle domain E4187_09780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E4187_09780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E4187_09785 PF00171 Aldehyde dehydrogenase family E4187_09790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E4187_09790 PF02770 Acyl-CoA dehydrogenase, middle domain E4187_09790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E4187_09795 PF00378 Enoyl-CoA hydratase/isomerase E4187_09800 PF00378 Enoyl-CoA hydratase/isomerase E4187_09805 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E4187_09805 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E4187_09815 PF13520 Amino acid permease E4187_09820 PF01925 Sulfite exporter TauE/SafE E4187_09840 PF01609 Transposase DDE domain E4187_09840 PF05598 Transposase domain (DUF772) E4187_09850 PF10711 Hypothetical protein (DUF2513) E4187_09855 PF05598 Transposase domain (DUF772) E4187_09855 PF01609 Transposase DDE domain E4187_09860 PF02796 Helix-turn-helix domain of resolvase E4187_09860 PF00239 Resolvase, N terminal domain E4187_09870 PF01609 Transposase DDE domain E4187_09870 PF13808 DDE_Tnp_1-associated E4187_09890 PF02653 Branched-chain amino acid transport system / permease component E4187_09895 PF02653 Branched-chain amino acid transport system / permease component E4187_09900 PF00005 ABC transporter E4187_09905 PF13407 Periplasmic binding protein domain E4187_09910 PF03466 LysR substrate binding domain E4187_09910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_09925 PF02634 FdhD/NarQ family E4187_09930 PF00384 Molybdopterin oxidoreductase E4187_09940 PF07694 5TMR of 5TMR-LYT E4187_09940 PF00990 Diguanylate cyclase, GGDEF domain E4187_09945 PF03466 LysR substrate binding domain E4187_09945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_09950 PF00232 Glycosyl hydrolase family 1 E4187_09960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_09960 PF03466 LysR substrate binding domain E4187_09970 PF00933 Glycosyl hydrolase family 3 N terminal domain E4187_09980 PF13808 DDE_Tnp_1-associated E4187_09980 PF01609 Transposase DDE domain E4187_09985 PF07694 5TMR of 5TMR-LYT E4187_09985 PF00990 Diguanylate cyclase, GGDEF domain E4187_09990 PF13673 Acetyltransferase (GNAT) domain E4187_09995 PF00293 NUDIX domain E4187_10010 PF02694 Uncharacterised BCR, YnfA/UPF0060 family E4187_10020 PF13673 Acetyltransferase (GNAT) domain E4187_10025 PF00270 DEAD/DEAH box helicase E4187_10025 PF00271 Helicase conserved C-terminal domain E4187_10030 PF00255 Glutathione peroxidase E4187_10040 PF01820 D-ala D-ala ligase N-terminus E4187_10040 PF07478 D-ala D-ala ligase C-terminus E4187_10045 PF18029 Glyoxalase-like domain E4187_10045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4187_10055 PF01925 Sulfite exporter TauE/SafE E4187_10060 PF03466 LysR substrate binding domain E4187_10060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_10070 PF12833 Helix-turn-helix domain E4187_10070 PF01965 DJ-1/PfpI family E4187_10075 PF11398 Protein of unknown function (DUF2813) E4187_10125 PF00883 Cytosol aminopeptidase family, catalytic domain E4187_10125 PF02789 Cytosol aminopeptidase family, N-terminal domain E4187_10130 PF13419 Haloacid dehalogenase-like hydrolase E4187_10135 PF07687 Peptidase dimerisation domain E4187_10135 PF01546 Peptidase family M20/M25/M40 E4187_10140 PF00365 Phosphofructokinase E4187_10145 PF00121 Triosephosphate isomerase E4187_10150 PF02698 DUF218 domain E4187_10155 PF13847 Methyltransferase domain E4187_10160 PF17193 MukF C-terminal domain E4187_10160 PF03882 MukF winged-helix domain E4187_10160 PF17192 MukF middle domain E4187_10165 PF04288 MukE-like family E4187_10170 PF04310 MukB N-terminal E4187_10170 PF16330 MukB hinge domain E4187_10175 PF05036 Sporulation related domain E4187_10175 PF03330 Lytic transglycolase E4187_10205 PF02567 Phenazine biosynthesis-like protein E4187_10215 PF01810 LysE type translocator E4187_10225 PF08274 PhnA Zinc-Ribbon E4187_10225 PF03831 PhnA domain E4187_10235 PF08329 Chitinase A, N-terminal domain E4187_10235 PF00704 Glycosyl hydrolases family 18 E4187_10255 PF00300 Histidine phosphatase superfamily (branch 1) E4187_10265 PF01713 Smr domain E4187_10270 PF05175 Methyltransferase small domain E4187_10275 PF01264 Chorismate synthase E4187_10285 PF00271 Helicase conserved C-terminal domain E4187_10285 PF00270 DEAD/DEAH box helicase E4187_10290 PF01124 MAPEG family E4187_10295 PF03222 Tryptophan/tyrosine permease family E4187_10300 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E4187_10300 PF00356 Bacterial regulatory proteins, lacI family E4187_10305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4187_10305 PF00381 PTS HPr component phosphorylation site E4187_10310 PF00294 pfkB family carbohydrate kinase E4187_10315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E4187_10315 PF02378 Phosphotransferase system, EIIC E4187_10320 PF06945 Protein of unknown function (DUF1289) E4187_10325 PF06725 3D domain E4187_10325 PF03562 MltA specific insert domain E4187_10330 PF00111 2Fe-2S iron-sulfur cluster binding domain E4187_10335 PF00268 Ribonucleotide reductase, small chain E4187_10340 PF03477 ATP cone domain E4187_10340 PF02867 Ribonucleotide reductase, barrel domain E4187_10340 PF00317 Ribonucleotide reductase, all-alpha domain E4187_10345 PF13419 Haloacid dehalogenase-like hydrolase E4187_10355 PF03989 DNA gyrase C-terminal domain, beta-propeller E4187_10355 PF00521 DNA gyrase/topoisomerase IV, subunit A E4187_10360 PF04055 Radical SAM superfamily E4187_10375 PF03129 Anticodon binding domain E4187_10375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4187_10375 PF02824 TGS domain E4187_10375 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4187_10380 PF05198 Translation initiation factor IF-3, N-terminal domain E4187_10380 PF00707 Translation initiation factor IF-3, C-terminal domain E4187_10385 PF01632 Ribosomal protein L35 E4187_10390 PF00453 Ribosomal protein L20 E4187_10395 PF01409 tRNA synthetases class II core domain (F) E4187_10395 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain E4187_10400 PF03483 B3/4 domain E4187_10400 PF03147 Ferredoxin-fold anticodon binding domain E4187_10400 PF01588 Putative tRNA binding domain E4187_10400 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain E4187_10400 PF03484 tRNA synthetase B5 domain E4187_10405 PF00216 Bacterial DNA-binding protein E4187_10410 PF09456 RcsC Alpha-Beta-Loop (ABL) E4187_10410 PF00512 His Kinase A (phospho-acceptor) domain E4187_10410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_10410 PF00072 Response regulator receiver domain E4187_10425 PF02146 Sir2 family E4187_10435 PF00990 Diguanylate cyclase, GGDEF domain E4187_10435 PF00563 EAL domain E4187_10435 PF03707 Bacterial signalling protein N terminal repeat E4187_10440 PF00356 Bacterial regulatory proteins, lacI family E4187_10445 PF00294 pfkB family carbohydrate kinase E4187_10450 PF13407 Periplasmic binding protein domain E4187_10455 PF02653 Branched-chain amino acid transport system / permease component E4187_10460 PF00005 ABC transporter E4187_10465 PF05025 RbsD / FucU transport protein family E4187_10470 PF13417 Glutathione S-transferase, N-terminal domain E4187_10485 PF01171 PP-loop family E4187_10490 PF00582 Universal stress protein family E4187_10495 PF13545 Crp-like helix-turn-helix domain E4187_10495 PF00027 Cyclic nucleotide-binding domain E4187_10510 PF00403 Heavy-metal-associated domain E4187_10520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E4187_10520 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP E4187_10535 PF00115 Cytochrome C and Quinol oxidase polypeptide I E4187_10545 PF13185 GAF domain E4187_10550 PF17516 ProQ C-terminal domain E4187_10550 PF04352 ProQ/FINO family E4187_10555 PF11818 C-terminal domain of tail specific protease (DUF3340) E4187_10555 PF00595 PDZ domain E4187_10555 PF03572 Peptidase family S41 E4187_10555 PF17804 Tail specific protease N-terminal domain E4187_10560 PF01433 Peptidase family M1 domain E4187_10560 PF17432 Domain of unknown function (DUF3458_C) ARM repeats E4187_10560 PF11940 Domain of unknown function (DUF3458) Ig-like fold E4187_10570 PF05088 Bacterial NAD-glutamate dehydrogenase E4187_10575 PF01180 Dihydroorotate dehydrogenase E4187_10580 PF07126 Cell-division protein ZapC E4187_10585 PF02926 THUMP domain E4187_10585 PF10672 S-adenosylmethionine-dependent methyltransferase E4187_10585 PF01170 Putative RNA methylase family UPF0020 E4187_10595 PF12848 ABC transporter E4187_10595 PF16326 ABC transporter C-terminal domain E4187_10595 PF00005 ABC transporter E4187_10605 PF04957 Ribosome modulation factor E4187_10610 PF07977 FabA-like domain E4187_10615 PF13654 AAA domain E4187_10615 PF05362 Lon protease (S16) C-terminal proteolytic domain E4187_10630 PF05840 Bacteriophage replication gene A protein (GPA) E4187_10680 PF07130 YebG protein E4187_10690 PF04403 Paraquat-inducible protein A E4187_10695 PF02470 MlaD protein E4187_10700 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF E4187_10700 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF E4187_10700 PF01189 16S rRNA methyltransferase RsmB/F E4187_10710 PF00589 Phage integrase family E4187_10715 PF01026 TatD related DNase E4187_10720 PF09115 DNA polymerase III, delta subunit, C terminal E4187_10725 PF02223 Thymidylate kinase E4187_10730 PF02618 YceG-like family E4187_10735 PF01063 Amino-transferase class IV E4187_10740 PF00109 Beta-ketoacyl synthase, N-terminal domain E4187_10740 PF02801 Beta-ketoacyl synthase, C-terminal domain E4187_10745 PF00550 Phosphopantetheine attachment site E4187_10755 PF00698 Acyl transferase domain E4187_10760 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4187_10760 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E4187_10765 PF02504 Fatty acid synthesis protein E4187_10770 PF01783 Ribosomal L32p protein family E4187_10775 PF02620 Large ribosomal RNA subunit accumulation protein YceD E4187_10785 PF02545 Maf-like protein E4187_10790 PF13419 Haloacid dehalogenase-like hydrolase E4187_10795 PF01479 S4 domain E4187_10795 PF00849 RNA pseudouridylate synthase E4187_10800 PF10150 Ribonuclease E/G family E4187_10800 PF00575 S1 RNA binding domain E4187_10800 PF12111 Polyribonucleotide phosphorylase C terminal E4187_10805 PF01384 Phosphate transporter family E4187_10810 PF00692 dUTPase E4187_10815 PF00485 Phosphoribulokinase / Uridine kinase family E4187_10820 PF10609 NUBPL iron-transfer P-loop NTPase E4187_10825 PF01588 Putative tRNA binding domain E4187_10825 PF09334 tRNA synthetases class I (M) E4187_10825 PF08264 Anticodon-binding domain of tRNA E4187_10835 PF00708 Acylphosphatase E4187_10840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_10840 PF12729 Four helix bundle sensory module for signal transduction E4187_10840 PF00672 HAMP domain E4187_10845 PF17785 PUA-like domain E4187_10845 PF10672 S-adenosylmethionine-dependent methyltransferase E4187_10855 PF00586 AIR synthase related protein, N-terminal domain E4187_10855 PF02769 AIR synthase related protein, C-terminal domain E4187_10865 PF00753 Metallo-beta-lactamase superfamily E4187_10870 PF00072 Response regulator receiver domain E4187_10880 PF01386 Ribosomal L25p family E4187_10890 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold E4187_10890 PF00270 DEAD/DEAH box helicase E4187_10890 PF11898 Domain of unknown function (DUF3418) E4187_10890 PF00271 Helicase conserved C-terminal domain E4187_10890 PF04408 Helicase associated domain (HA2) E4187_10895 PF01743 Poly A polymerase head domain E4187_10895 PF02272 DHHA1 domain E4187_10895 PF01368 DHH family E4187_10895 PF00571 CBS domain E4187_10900 PF00072 Response regulator receiver domain E4187_10900 PF00196 Bacterial regulatory proteins, luxR family E4187_10910 PF03466 LysR substrate binding domain E4187_10910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_10915 PF05726 Pirin C-terminal cupin domain E4187_10915 PF02678 Pirin E4187_10920 PF00857 Isochorismatase family E4187_10925 PF02575 YbaB/EbfC DNA-binding family E4187_10930 PF12169 DNA polymerase III subunits gamma and tau domain III E4187_10930 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding E4187_10930 PF12170 DNA polymerase III tau subunit V interacting with alpha E4187_10935 PF00156 Phosphoribosyl transferase domain E4187_10940 PF04304 Protein of unknown function (DUF454) E4187_10945 PF01207 Dihydrouridine synthase (Dus) E4187_10955 PF00892 EamA-like transporter family E4187_10965 PF00570 HRDC domain E4187_10965 PF01612 3'-5' exonuclease E4187_10970 PF13193 AMP-binding enzyme C-terminal domain E4187_10970 PF00501 AMP-binding enzyme E4187_10975 PF00561 alpha/beta hydrolase fold E4187_10985 PF00814 Glycoprotease family E4187_10990 PF13307 Helicase C-terminal domain E4187_10990 PF04851 Type III restriction enzyme, res subunit E4187_11000 PF01634 ATP phosphoribosyltransferase E4187_11000 PF08029 HisG, C-terminal domain E4187_11005 PF00815 Histidinol dehydrogenase E4187_11010 PF00155 Aminotransferase class I and II E4187_11015 PF08645 Polynucleotide kinase 3 phosphatase E4187_11015 PF00475 Imidazoleglycerol-phosphate dehydratase E4187_11020 PF00117 Glutamine amidotransferase class-I E4187_11025 PF00977 Histidine biosynthesis protein E4187_11030 PF00072 Response regulator receiver domain E4187_11040 PF00072 Response regulator receiver domain E4187_11040 PF01627 Hpt domain E4187_11040 PF00512 His Kinase A (phospho-acceptor) domain E4187_11040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_11045 PF00977 Histidine biosynthesis protein E4187_11050 PF01502 Phosphoribosyl-AMP cyclohydrolase E4187_11050 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase E4187_11060 PF08279 HTH domain E4187_11060 PF13280 WYL domain E4187_11065 PF00501 AMP-binding enzyme E4187_11065 PF13193 AMP-binding enzyme C-terminal domain E4187_11070 PF05433 Glycine zipper 2TM domain E4187_11085 PF01032 FecCD transport family E4187_11090 PF00005 ABC transporter E4187_11095 PF07690 Major Facilitator Superfamily E4187_11110 PF07152 YaeQ protein E4187_11120 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E4187_11120 PF00378 Enoyl-CoA hydratase/isomerase E4187_11120 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E4187_11125 PF00108 Thiolase, N-terminal domain E4187_11125 PF02803 Thiolase, C-terminal domain E4187_11130 PF07726 ATPase family associated with various cellular activities (AAA) E4187_11130 PF17863 AAA lid domain E4187_11140 PF01882 Protein of unknown function DUF58 E4187_11150 PF13519 von Willebrand factor type A domain E4187_11150 PF17863 AAA lid domain E4187_11150 PF07728 AAA domain (dynein-related subfamily) E4187_11155 PF07584 Aerotolerance regulator N-terminal E4187_11155 PF13519 von Willebrand factor type A domain E4187_11165 PF04542 Sigma-70 region 2 E4187_11165 PF08281 Sigma-70, region 4 E4187_11175 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) E4187_11180 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) E4187_11185 PF08668 HDOD domain E4187_11185 PF00563 EAL domain E4187_11190 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) E4187_11200 PF00376 MerR family regulatory protein E4187_11200 PF09278 MerR, DNA binding E4187_11205 PF00375 Sodium:dicarboxylate symporter family E4187_11210 PF06865 Pyrimidine/purine nucleoside phosphorylase E4187_11215 PF03313 Serine dehydratase alpha chain E4187_11215 PF03315 Serine dehydratase beta chain E4187_11225 PF03313 Serine dehydratase alpha chain E4187_11225 PF03315 Serine dehydratase beta chain E4187_11230 PF13406 Transglycosylase SLT domain E4187_11235 PF05166 YcgL domain E4187_11240 PF03775 Septum formation inhibitor MinC, C-terminal domain E4187_11240 PF05209 Septum formation inhibitor MinC, N-terminal domain E4187_11245 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain E4187_11250 PF03776 Septum formation topological specificity factor MinE E4187_11255 PF04269 Protein of unknown function, DUF440 E4187_11260 PF00912 Transglycosylase E4187_11265 PF04269 Protein of unknown function, DUF440 E4187_11275 PF13509 S1 domain E4187_11275 PF17783 CvfB-like winged helix domain E4187_11295 PF02525 Flavodoxin-like fold E4187_11300 PF00892 EamA-like transporter family E4187_11305 PF01370 NAD dependent epimerase/dehydratase family E4187_11305 PF02222 ATP-grasp domain E4187_11310 PF13419 Haloacid dehalogenase-like hydrolase E4187_11320 PF00677 Lumazine binding domain E4187_11325 PF06786 Uncharacterised protein family (UPF0253) E4187_11330 PF01554 MatE E4187_11360 PF00136 DNA polymerase family B E4187_11360 PF03104 DNA polymerase family B, exonuclease domain E4187_11370 PF05726 Pirin C-terminal cupin domain E4187_11370 PF02678 Pirin E4187_11385 PF03279 Bacterial lipid A biosynthesis acyltransferase E4187_11390 PF03279 Bacterial lipid A biosynthesis acyltransferase E4187_11400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_11400 PF03466 LysR substrate binding domain E4187_11405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E4187_11405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E4187_11410 PF01261 Xylose isomerase-like TIM barrel E4187_11415 PF03992 Antibiotic biosynthesis monooxygenase E4187_11420 PF08543 Phosphomethylpyrimidine kinase E4187_11440 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus E4187_11440 PF00561 alpha/beta hydrolase fold E4187_11445 PF01575 MaoC like domain E4187_11465 PF00005 ABC transporter E4187_11465 PF00664 ABC transporter transmembrane region E4187_11470 PF00664 ABC transporter transmembrane region E4187_11470 PF00005 ABC transporter E4187_11475 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E4187_11475 PF00072 Response regulator receiver domain E4187_11475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_11475 PF00512 His Kinase A (phospho-acceptor) domain E4187_11475 PF01627 Hpt domain E4187_11475 PF00672 HAMP domain E4187_11480 PF00085 Thioredoxin E4187_11485 PF00939 Sodium:sulfate symporter transmembrane region E4187_11495 PF00343 Carbohydrate phosphorylase E4187_11515 PF00425 chorismate binding enzyme E4187_11515 PF04715 Anthranilate synthase component I, N terminal region E4187_11520 PF00293 NUDIX domain E4187_11525 PF03222 Tryptophan/tyrosine permease family E4187_11530 PF00375 Sodium:dicarboxylate symporter family E4187_11535 PF00570 HRDC domain E4187_11535 PF09382 RQC domain E4187_11535 PF16124 RecQ zinc-binding E4187_11535 PF00270 DEAD/DEAH box helicase E4187_11535 PF00271 Helicase conserved C-terminal domain E4187_11540 PF08298 PrkA AAA domain E4187_11540 PF06798 PrkA serine protein kinase C-terminal domain E4187_11545 PF04285 Protein of unknown function (DUF444) E4187_11550 PF04293 SpoVR like protein E4187_11555 PF07840 FadR C-terminal domain E4187_11555 PF00392 Bacterial regulatory proteins, gntR family E4187_11560 PF06450 Bacterial Na+/H+ antiporter B (NhaB) E4187_11565 PF02600 Disulfide bond formation protein DsbB E4187_11575 PF09335 SNARE associated Golgi protein E4187_11585 PF17757 UvrB interaction domain E4187_11585 PF12344 Ultra-violet resistance protein B E4187_11585 PF02151 UvrB/uvrC motif E4187_11585 PF00271 Helicase conserved C-terminal domain E4187_11585 PF04851 Type III restriction enzyme, res subunit E4187_11600 PF06826 Predicted Permease Membrane Region E4187_11600 PF02080 TrkA-C domain E4187_11605 PF01464 Transglycosylase SLT domain E4187_11605 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4187_11620 PF01970 Tripartite tricarboxylate transporter TctA family E4187_11625 PF00072 Response regulator receiver domain E4187_11630 PF17203 Single cache domain 3 E4187_11630 PF00989 PAS fold E4187_11630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_11630 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain E4187_11635 PF00480 ROK family E4187_11635 PF01047 MarR family E4187_11640 PF17200 Single Cache domain 2 E4187_11640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_11640 PF00672 HAMP domain E4187_11645 PF02810 SEC-C motif E4187_11650 PF01266 FAD dependent oxidoreductase E4187_11650 PF04324 BFD-like [2Fe-2S] binding domain E4187_11655 PF00890 FAD binding domain E4187_11660 PF13183 4Fe-4S dicluster domain E4187_11660 PF02754 Cysteine-rich domain E4187_11670 PF13808 DDE_Tnp_1-associated E4187_11670 PF01609 Transposase DDE domain E4187_11680 PF02335 Cytochrome c552 E4187_11685 PF13435 Cytochrome c554 and c-prime E4187_11685 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) E4187_11690 PF00037 4Fe-4S binding domain E4187_11690 PF13247 4Fe-4S dicluster domain E4187_11695 PF03916 Polysulphide reductase, NrfD E4187_11700 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal E4187_11700 PF01578 Cytochrome C assembly protein E4187_11705 PF08534 Redoxin E4187_11710 PF03918 Cytochrome C biogenesis protein E4187_11720 PF00768 D-alanyl-D-alanine carboxypeptidase E4187_11730 PF04244 Deoxyribodipyrimidine photo-lyase-related protein E4187_11735 PF01266 FAD dependent oxidoreductase E4187_11745 PF07969 Amidohydrolase family E4187_11750 PF00571 CBS domain E4187_11760 PF01717 Cobalamin-independent synthase, Catalytic domain E4187_11760 PF08267 Cobalamin-independent synthase, N-terminal domain E4187_11765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_11765 PF03466 LysR substrate binding domain E4187_11775 PF00593 TonB dependent receptor E4187_11775 PF07715 TonB-dependent Receptor Plug Domain E4187_11780 PF06445 GyrI-like small molecule binding domain E4187_11780 PF12833 Helix-turn-helix domain E4187_11785 PF00106 short chain dehydrogenase E4187_11790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_11790 PF03466 LysR substrate binding domain E4187_11795 PF13460 NAD(P)H-binding E4187_11805 PF01053 Cys/Met metabolism PLP-dependent enzyme E4187_11810 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E4187_11810 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E4187_11835 PF01609 Transposase DDE domain E4187_11835 PF05598 Transposase domain (DUF772) E4187_11945 PF00872 Transposase, Mutator family E4187_11960 PF13657 HipA N-terminal domain E4187_11960 PF07804 HipA-like C-terminal domain E4187_11975 PF00141 Peroxidase E4187_11990 PF10722 Putative bacterial sensory transduction regulator E4187_12000 PF00265 Thymidine kinase E4187_12005 PF03553 Na+/H+ antiporter family E4187_12010 PF00816 H-NS histone family E4187_12015 PF01923 Cobalamin adenosyltransferase E4187_12020 PF12843 Putative quorum-sensing-regulated virulence factor E4187_12025 PF04055 Radical SAM superfamily E4187_12030 PF06508 Queuosine biosynthesis protein QueC E4187_12045 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E4187_12050 PF18073 Rubredoxin metal binding domain E4187_12060 PF00216 Bacterial DNA-binding protein E4187_12065 PF00575 S1 RNA binding domain E4187_12070 PF02224 Cytidylate kinase E4187_12075 PF00925 GTP cyclohydrolase II E4187_12080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_12080 PF03466 LysR substrate binding domain E4187_12085 PF07690 Major Facilitator Superfamily E4187_12105 PF03806 AbgT putative transporter family E4187_12110 PF13188 PAS domain E4187_12110 PF00563 EAL domain E4187_12110 PF00990 Diguanylate cyclase, GGDEF domain E4187_12110 PF03707 Bacterial signalling protein N terminal repeat E4187_12120 PF03466 LysR substrate binding domain E4187_12120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_12125 PF00072 Response regulator receiver domain E4187_12135 PF01212 Beta-eliminating lyase E4187_12150 PF00248 Aldo/keto reductase family E4187_12155 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) E4187_12165 PF03411 Penicillin-insensitive murein endopeptidase E4187_12175 PF04536 TPM domain E4187_12195 PF01618 MotA/TolQ/ExbB proton channel family E4187_12200 PF13677 Membrane MotB of proton-channel complex MotA/MotB E4187_12200 PF00691 OmpA family E4187_12205 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 E4187_12210 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E4187_12215 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit E4187_12215 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit E4187_12225 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4187_12225 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E4187_12230 PF00384 Molybdopterin oxidoreductase E4187_12230 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E4187_12230 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E4187_12235 PF00146 NADH dehydrogenase E4187_12240 PF12838 4Fe-4S dicluster domain E4187_12245 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 E4187_12250 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L E4187_12255 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus E4187_12255 PF00361 Proton-conducting membrane transporter E4187_12260 PF00361 Proton-conducting membrane transporter E4187_12265 PF00361 Proton-conducting membrane transporter E4187_12270 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal E4187_12270 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain E4187_12270 PF02769 AIR synthase related protein, C-terminal domain E4187_12275 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4187_12275 PF01464 Transglycosylase SLT domain E4187_12285 PF01926 50S ribosome-binding GTPase E4187_12285 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E4187_12290 PF13360 PQQ-like domain E4187_12295 PF09976 Tetratricopeptide repeat-like domain E4187_12300 PF13393 Histidyl-tRNA synthetase E4187_12300 PF03129 Anticodon binding domain E4187_12305 PF04551 GcpE protein E4187_12310 PF13464 Domain of unknown function (DUF4115) E4187_12320 PF04055 Radical SAM superfamily E4187_12325 PF00334 Nucleoside diphosphate kinase E4187_12330 PF00883 Cytosol aminopeptidase family, catalytic domain E4187_12330 PF12404 Peptidase E4187_12335 PF00883 Cytosol aminopeptidase family, catalytic domain E4187_12335 PF12404 Peptidase E4187_12340 PF00111 2Fe-2S iron-sulfur cluster binding domain E4187_12345 PF00012 Hsp70 protein E4187_12350 PF07743 HSCB C-terminal oligomerisation domain E4187_12350 PF00226 DnaJ domain E4187_12355 PF01521 Iron-sulphur cluster biosynthesis E4187_12360 PF01592 NifU-like N terminal domain E4187_12365 PF00266 Aminotransferase class-V E4187_12370 PF02082 Transcriptional regulator E4187_12375 PF00588 SpoU rRNA Methylase family E4187_12385 PF02036 SCP-2 sterol transfer family E4187_12390 PF01136 Peptidase family U32 E4187_12395 PF01136 Peptidase family U32 E4187_12400 PF13181 Tetratricopeptide repeat E4187_12400 PF07719 Tetratricopeptide repeat E4187_12405 PF00581 Rhodanese-like domain E4187_12410 PF07549 SecD/SecF GG Motif E4187_12410 PF02355 Protein export membrane protein E4187_12415 PF13721 SecD export protein N-terminal TM region E4187_12415 PF07549 SecD/SecF GG Motif E4187_12415 PF02355 Protein export membrane protein E4187_12420 PF02699 Preprotein translocase subunit E4187_12425 PF01702 Queuine tRNA-ribosyltransferase E4187_12430 PF02547 Queuosine biosynthesis protein E4187_12435 PF00571 CBS domain E4187_12440 PF00578 AhpC/TSA family E4187_12440 PF10417 C-terminal domain of 1-Cys peroxiredoxin E4187_12445 PF13192 Thioredoxin domain E4187_12445 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4187_12450 PF07690 Major Facilitator Superfamily E4187_12460 PF08241 Methyltransferase domain E4187_12475 PF01609 Transposase DDE domain E4187_12475 PF05598 Transposase domain (DUF772) E4187_12480 PF13006 Insertion element 4 transposase N-terminal E4187_12480 PF01609 Transposase DDE domain E4187_12485 PF02347 Glycine cleavage system P-protein E4187_12490 PF01597 Glycine cleavage H-protein E4187_12495 PF01571 Aminomethyltransferase folate-binding domain E4187_12495 PF08669 Glycine cleavage T-protein C-terminal barrel domain E4187_12500 PF01494 FAD binding domain E4187_12505 PF01494 FAD binding domain E4187_12510 PF03695 Uncharacterised protein family (UPF0149) E4187_12515 PF05164 Cell division protein ZapA E4187_12525 PF07690 Major Facilitator Superfamily E4187_12530 PF12704 MacB-like periplasmic core domain E4187_12530 PF00005 ABC transporter E4187_12530 PF02687 FtsX-like permease family E4187_12535 PF12911 N-terminal TM domain of oligopeptide transport permease C E4187_12535 PF00528 Binding-protein-dependent transport system inner membrane component E4187_12540 PF00528 Binding-protein-dependent transport system inner membrane component E4187_12545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4187_12550 PF02798 Glutathione S-transferase, N-terminal domain E4187_12550 PF00043 Glutathione S-transferase, C-terminal domain E4187_12565 PF00459 Inositol monophosphatase family E4187_12570 PF00691 OmpA family E4187_12570 PF18393 MotY N-terminal domain E4187_12575 PF12729 Four helix bundle sensory module for signal transduction E4187_12575 PF00672 HAMP domain E4187_12575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_12580 PF00929 Exonuclease E4187_12585 PF03553 Na+/H+ antiporter family E4187_12585 PF13726 Na+-H+ antiporter family E4187_12590 PF07690 Major Facilitator Superfamily E4187_12595 PF03466 LysR substrate binding domain E4187_12595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_12600 PF00563 EAL domain E4187_12600 PF08448 PAS fold E4187_12600 PF08447 PAS fold E4187_12600 PF00990 Diguanylate cyclase, GGDEF domain E4187_12610 PF00270 DEAD/DEAH box helicase E4187_12610 PF00271 Helicase conserved C-terminal domain E4187_12610 PF03880 DbpA RNA binding domain E4187_12615 PF03061 Thioesterase superfamily E4187_12635 PF03741 Integral membrane protein TerC family E4187_12635 PF03471 Transporter associated domain E4187_12640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4187_12645 PF00962 Adenosine/AMP deaminase E4187_12650 PF13344 Haloacid dehalogenase-like hydrolase E4187_12660 PF13537 Glutamine amidotransferase domain E4187_12660 PF00733 Asparagine synthase E4187_12670 PF02798 Glutathione S-transferase, N-terminal domain E4187_12670 PF14497 Glutathione S-transferase, C-terminal domain E4187_12680 PF04209 homogentisate 1,2-dioxygenase E4187_12685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4187_12695 PF00849 RNA pseudouridylate synthase E4187_12700 PF00990 Diguanylate cyclase, GGDEF domain E4187_12700 PF08448 PAS fold E4187_12705 PF01609 Transposase DDE domain E4187_12705 PF13006 Insertion element 4 transposase N-terminal E4187_12710 PF08447 PAS fold E4187_12710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_12715 PF00501 AMP-binding enzyme E4187_12715 PF13193 AMP-binding enzyme C-terminal domain E4187_12735 PF14870 Photosynthesis system II assembly factor YCF48 E4187_12740 PF07044 Protein of unknown function (DUF1329) E4187_12750 PF01144 Coenzyme A transferase E4187_12755 PF01144 Coenzyme A transferase E4187_12760 PF03601 Conserved hypothetical protein 698 E4187_12770 PF07690 Major Facilitator Superfamily E4187_12775 PF05853 beta-keto acid cleavage enzyme E4187_12780 PF02668 Taurine catabolism dioxygenase TauD, TfdA family E4187_12785 PF00107 Zinc-binding dehydrogenase E4187_12785 PF08240 Alcohol dehydrogenase GroES-like domain E4187_12795 PF00285 Citrate synthase, C-terminal domain E4187_12800 PF00330 Aconitase family (aconitate hydratase) E4187_12800 PF00694 Aconitase C-terminal domain E4187_12805 PF04303 PrpF protein E4187_12815 PF01027 Inhibitor of apoptosis-promoting Bax1 E4187_12820 PF12805 FUSC-like inner membrane protein yccS E4187_12825 PF04358 DsrC like protein E4187_12830 PF05036 Sporulation related domain E4187_12835 PF02875 Mur ligase family, glutamate ligase domain E4187_12835 PF08245 Mur ligase middle domain E4187_12840 PF17848 Acetyl-coA carboxylase zinc finger domain E4187_12840 PF01039 Carboxyl transferase domain E4187_12845 PF01416 tRNA pseudouridine synthase E4187_12855 PF01118 Semialdehyde dehydrogenase, NAD binding domain E4187_12855 PF02774 Semialdehyde dehydrogenase, dimerisation domain E4187_12860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4187_12860 PF11890 Domain of unknown function (DUF3410) E4187_12860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4187_12865 PF01569 PAP2 superfamily E4187_12870 PF03180 NLPA lipoprotein E4187_12890 PF00005 ABC transporter E4187_12895 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E4187_12895 PF02896 PEP-utilising enzyme, TIM barrel domain E4187_12895 PF00391 PEP-utilising enzyme, mobile domain E4187_12900 PF03618 Kinase/pyrophosphorylase E4187_12910 PF00324 Amino acid permease E4187_12950 PF00005 ABC transporter E4187_12950 PF03412 Peptidase C39 family E4187_12950 PF00664 ABC transporter transmembrane region E4187_12955 PF04055 Radical SAM superfamily E4187_12955 PF16199 Radical_SAM C-terminal domain E4187_12960 PF00310 Glutamine amidotransferases class-II E4187_12960 PF04898 Glutamate synthase central domain E4187_12960 PF01645 Conserved region in glutamate synthase E4187_12960 PF01493 GXGXG motif E4187_12965 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4187_12965 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4187_12970 PF13006 Insertion element 4 transposase N-terminal E4187_12970 PF01609 Transposase DDE domain E4187_12975 PF00005 ABC transporter E4187_12980 PF00528 Binding-protein-dependent transport system inner membrane component E4187_12985 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4187_13000 PF14521 Lysine-specific metallo-endopeptidase E4187_13010 PF00270 DEAD/DEAH box helicase E4187_13010 PF00271 Helicase conserved C-terminal domain E4187_13025 PF08378 Nuclease-related domain E4187_13030 PF07759 Protein of unknown function (DUF1615) E4187_13040 PF00682 HMGL-like E4187_13040 PF08502 LeuA allosteric (dimerisation) domain E4187_13045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E4187_13045 PF02142 MGS-like domain E4187_13045 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain E4187_13050 PF00117 Glutamine amidotransferase class-I E4187_13050 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain E4187_13055 PF05173 Dihydrodipicolinate reductase, C-terminus E4187_13055 PF01113 Dihydrodipicolinate reductase, N-terminus E4187_13065 PF01812 5-formyltetrahydrofolate cyclo-ligase family E4187_13070 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) E4187_13075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4187_13075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4187_13075 PF01842 ACT domain E4187_13080 PF01219 Prokaryotic diacylglycerol kinase E4187_13085 PF00793 DAHP synthetase I family E4187_13090 PF00005 ABC transporter E4187_13095 PF01032 FecCD transport family E4187_13110 PF00437 Type II/IV secretion system protein E4187_13115 PF00483 Nucleotidyl transferase E4187_13125 PF07664 Ferrous iron transport protein B C terminus E4187_13125 PF02421 Ferrous iron transport protein B E4187_13125 PF07670 Nucleoside recognition E4187_13135 PF01253 Translation initiation factor SUI1 E4187_13140 PF01169 Uncharacterized protein family UPF0016 E4187_13170 PF13006 Insertion element 4 transposase N-terminal E4187_13170 PF01609 Transposase DDE domain E4187_13205 PF05598 Transposase domain (DUF772) E4187_13205 PF01609 Transposase DDE domain E4187_13210 PF09190 DALR domain E4187_13210 PF01406 tRNA synthetases class I (C) catalytic domain E4187_13215 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E4187_13225 PF00149 Calcineurin-like phosphoesterase E4187_13230 PF04226 Transglycosylase associated protein E4187_13235 PF00043 Glutathione S-transferase, C-terminal domain E4187_13235 PF13417 Glutathione S-transferase, N-terminal domain E4187_13245 PF12323 Helix-turn-helix domain E4187_13255 PF02661 Fic/DOC family E4187_13255 PF13784 Fic/DOC family N-terminal E4187_13295 PF00589 Phage integrase family E4187_13315 PF01066 CDP-alcohol phosphatidyltransferase E4187_13320 PF01541 GIY-YIG catalytic domain E4187_13320 PF02151 UvrB/uvrC motif E4187_13320 PF08459 UvrC Helix-hairpin-helix N-terminal E4187_13325 PF00072 Response regulator receiver domain E4187_13325 PF00196 Bacterial regulatory proteins, luxR family E4187_13330 PF02348 Cytidylyltransferase E4187_13335 PF03966 Trm112p-like protein E4187_13340 PF02606 Tetraacyldisaccharide-1-P 4'-kinase E4187_13345 PF00005 ABC transporter E4187_13345 PF00664 ABC transporter transmembrane region E4187_13350 PF03772 Competence protein E4187_13350 PF00753 Metallo-beta-lactamase superfamily E4187_13365 PF05872 Bacterial protein of unknown function (DUF853) E4187_13370 PF00155 Aminotransferase class I and II E4187_13380 PF13609 Gram-negative porin E4187_13385 PF13307 Helicase C-terminal domain E4187_13385 PF06733 DEAD_2 E4187_13395 PF00850 Histone deacetylase domain E4187_13400 PF07690 Major Facilitator Superfamily E4187_13405 PF01926 50S ribosome-binding GTPase E4187_13410 PF00245 Alkaline phosphatase E4187_13415 PF00245 Alkaline phosphatase E4187_13435 PF14760 Rnk N-terminus E4187_13435 PF01272 Transcription elongation factor, GreA/GreB, C-term E4187_13440 PF00072 Response regulator receiver domain E4187_13440 PF00196 Bacterial regulatory proteins, luxR family E4187_13445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_13445 PF07730 Histidine kinase E4187_13445 PF05231 MASE1 E4187_13450 PF07690 Major Facilitator Superfamily E4187_13460 PF07282 Putative transposase DNA-binding domain E4187_13460 PF12323 Helix-turn-helix domain E4187_13460 PF01385 Probable transposase E4187_13475 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4187_13480 PF00528 Binding-protein-dependent transport system inner membrane component E4187_13485 PF00005 ABC transporter E4187_13490 PF04116 Fatty acid hydroxylase superfamily E4187_13495 PF13520 Amino acid permease E4187_13510 PF03471 Transporter associated domain E4187_13510 PF00571 CBS domain E4187_13510 PF01595 Cyclin M transmembrane N-terminal domain E4187_13515 PF01895 PhoU domain E4187_13525 PF00528 Binding-protein-dependent transport system inner membrane component E4187_13530 PF00528 Binding-protein-dependent transport system inner membrane component E4187_13535 PF14437 MafB19-like deaminase E4187_13545 PF01274 Malate synthase E4187_13550 PF00463 Isocitrate lyase family E4187_13555 PF13006 Insertion element 4 transposase N-terminal E4187_13555 PF01609 Transposase DDE domain E4187_13560 PF00308 Bacterial dnaA protein E4187_13575 PF00586 AIR synthase related protein, N-terminal domain E4187_13575 PF02769 AIR synthase related protein, C-terminal domain E4187_13580 PF00551 Formyl transferase E4187_13585 PF01784 NIF3 (NGG1p interacting factor 3) E4187_13590 PF00072 Response regulator receiver domain E4187_13590 PF00158 Sigma-54 interaction domain E4187_13590 PF02954 Bacterial regulatory protein, Fis family E4187_13595 PF00989 PAS fold E4187_13595 PF00512 His Kinase A (phospho-acceptor) domain E4187_13595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_13600 PF02954 Bacterial regulatory protein, Fis family E4187_13600 PF06490 Flagellar regulatory protein FleQ E4187_13600 PF00158 Sigma-54 interaction domain E4187_13610 PF01842 ACT domain E4187_13615 PF13089 Polyphosphate kinase N-terminal domain E4187_13615 PF13090 Polyphosphate kinase C-terminal domain 2 E4187_13615 PF02503 Polyphosphate kinase middle domain E4187_13615 PF17941 Polyphosphate kinase C-terminal domain 1 E4187_13620 PF02541 Ppx/GppA phosphatase family E4187_13635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4187_13635 PF07196 Flagellin hook IN motif E4187_13640 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E4187_13640 PF10135 Rod binding protein E4187_13645 PF02119 Flagellar P-ring protein E4187_13650 PF02107 Flagellar L-ring protein E4187_13655 PF00460 Flagella basal body rod protein E4187_13655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4187_13660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4187_13660 PF00460 Flagella basal body rod protein E4187_13665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4187_13665 PF00460 Flagella basal body rod protein E4187_13675 PF00460 Flagella basal body rod protein E4187_13675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4187_13680 PF00460 Flagella basal body rod protein E4187_13685 PF03705 CheR methyltransferase, all-alpha domain E4187_13685 PF01739 CheR methyltransferase, SAM binding domain E4187_13690 PF01584 CheW-like domain E4187_13690 PF00072 Response regulator receiver domain E4187_13695 PF13144 Chaperone for flagella basal body P-ring formation E4187_13710 PF12850 Calcineurin-like phosphoesterase superfamily domain E4187_13715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4187_13725 PF00849 RNA pseudouridylate synthase E4187_13725 PF01479 S4 domain E4187_13730 PF01609 Transposase DDE domain E4187_13730 PF13006 Insertion element 4 transposase N-terminal E4187_13735 PF12323 Helix-turn-helix domain E4187_13735 PF01385 Probable transposase E4187_13735 PF07282 Putative transposase DNA-binding domain E4187_13745 PF01966 HD domain E4187_13745 PF11871 Domain of unknown function (DUF3391) E4187_13755 PF00892 EamA-like transporter family E4187_13760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4187_13785 PF00313 'Cold-shock' DNA-binding domain E4187_13790 PF02817 e3 binding domain E4187_13790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E4187_13790 PF00364 Biotin-requiring enzyme E4187_13795 PF02780 Transketolase, C-terminal domain E4187_13795 PF02779 Transketolase, pyrimidine binding domain E4187_13800 PF00676 Dehydrogenase E1 component E4187_13805 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family E4187_13815 PF05472 DNA replication terminus site-binding protein (Ter protein) E4187_13820 PF00176 SNF2 family N-terminal domain E4187_13820 PF00271 Helicase conserved C-terminal domain E4187_13820 PF04434 SWIM zinc finger E4187_13825 PF04337 Protein of unknown function, DUF480 E4187_13840 PF06082 Exopolysaccharide biosynthesis protein YbjH E4187_13845 PF06251 Capsule biosynthesis GfcC E4187_13860 PF13614 AAA domain E4187_13860 PF02706 Chain length determinant protein E4187_13860 PF13807 G-rich domain on putative tyrosine kinase E4187_13865 PF01451 Low molecular weight phosphotyrosine protein phosphatase E4187_13870 PF10531 SLBB domain E4187_13870 PF18412 Outer-membrane lipoprotein Wza C-terminal domain E4187_13870 PF02563 Polysaccharide biosynthesis/export protein E4187_13895 PF00534 Glycosyl transferases group 1 E4187_13895 PF13439 Glycosyltransferase Family 4 E4187_13900 PF00534 Glycosyl transferases group 1 E4187_13900 PF13439 Glycosyltransferase Family 4 E4187_13905 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 E4187_13905 PF00535 Glycosyl transferase family 2 E4187_13920 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4187_13925 PF05523 WxcM-like, C-terminal E4187_13930 PF00483 Nucleotidyl transferase E4187_13935 PF16363 GDP-mannose 4,6 dehydratase E4187_13940 PF00953 Glycosyl transferase family 4 E4187_13945 PF02719 Polysaccharide biosynthesis protein E4187_13950 PF00953 Glycosyl transferase family 4 E4187_13955 PF01370 NAD dependent epimerase/dehydratase family E4187_13965 PF00005 ABC transporter E4187_13970 PF01061 ABC-2 type transporter E4187_13985 PF01370 NAD dependent epimerase/dehydratase family E4187_13995 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase E4187_14000 PF00483 Nucleotidyl transferase E4187_14005 PF04321 RmlD substrate binding domain E4187_14010 PF16363 GDP-mannose 4,6 dehydratase E4187_14020 PF00072 Response regulator receiver domain E4187_14020 PF00486 Transcriptional regulatory protein, C terminal E4187_14025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_14025 PF08918 PhoQ Sensor E4187_14030 PF02685 Glucokinase E4187_14035 PF01380 SIS domain E4187_14035 PF01418 Helix-turn-helix domain, rpiR family E4187_14040 PF00224 Pyruvate kinase, barrel domain E4187_14040 PF02887 Pyruvate kinase, alpha/beta domain E4187_14050 PF00873 AcrB/AcrD/AcrF family E4187_14055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E4187_14055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E4187_14055 PF09317 Domain of unknown function (DUF1974) E4187_14055 PF02770 Acyl-CoA dehydrogenase, middle domain E4187_14060 PF00440 Bacterial regulatory proteins, tetR family E4187_14095 PF01609 Transposase DDE domain E4187_14095 PF13808 DDE_Tnp_1-associated E4187_14105 PF05598 Transposase domain (DUF772) E4187_14105 PF01609 Transposase DDE domain E4187_14125 PF12323 Helix-turn-helix domain E4187_14130 PF05973 Phage derived protein Gp49-like (DUF891) E4187_14150 PF01695 IstB-like ATP binding protein E4187_14155 PF00665 Integrase core domain E4187_14165 PF12323 Helix-turn-helix domain E4187_14170 PF05598 Transposase domain (DUF772) E4187_14170 PF01609 Transposase DDE domain E4187_14185 PF02321 Outer membrane efflux protein E4187_14190 PF00873 AcrB/AcrD/AcrF family E4187_14195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4187_14195 PF00529 HlyD membrane-fusion protein of T1SS E4187_14200 PF00440 Bacterial regulatory proteins, tetR family E4187_14200 PF08361 MAATS-type transcriptional repressor, C-terminal region E4187_14220 PF00849 RNA pseudouridylate synthase E4187_14220 PF01479 S4 domain E4187_14225 PF04079 Segregation and condensation complex subunit ScpB E4187_14230 PF02616 Segregation and condensation protein ScpA E4187_14235 PF01300 Telomere recombination E4187_14240 PF02811 PHP domain E4187_14250 PF00425 chorismate binding enzyme E4187_14250 PF04715 Anthranilate synthase component I, N terminal region E4187_14255 PF02885 Glycosyl transferase family, helical bundle domain E4187_14255 PF00117 Glutamine amidotransferase class-I E4187_14255 PF00591 Glycosyl transferase family, a/b domain E4187_14260 PF02885 Glycosyl transferase family, helical bundle domain E4187_14260 PF00591 Glycosyl transferase family, a/b domain E4187_14265 PF00218 Indole-3-glycerol phosphate synthase E4187_14265 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase E4187_14270 PF00291 Pyridoxal-phosphate dependent enzyme E4187_14275 PF00290 Tryptophan synthase alpha chain E4187_14280 PF00700 Bacterial flagellin C-terminal helical region E4187_14280 PF07196 Flagellin hook IN motif E4187_14280 PF00669 Bacterial flagellin N-terminal helical region E4187_14285 PF01609 Transposase DDE domain E4187_14285 PF13808 DDE_Tnp_1-associated E4187_14290 PF00700 Bacterial flagellin C-terminal helical region E4187_14290 PF07196 Flagellin hook IN motif E4187_14290 PF00669 Bacterial flagellin N-terminal helical region E4187_14295 PF01381 Helix-turn-helix E4187_14300 PF07804 HipA-like C-terminal domain E4187_14300 PF13657 HipA N-terminal domain E4187_14320 PF03466 LysR substrate binding domain E4187_14320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_14330 PF01609 Transposase DDE domain E4187_14330 PF13006 Insertion element 4 transposase N-terminal E4187_14335 PF07237 Protein of unknown function (DUF1428) E4187_14340 PF07690 Major Facilitator Superfamily E4187_14350 PF01040 UbiA prenyltransferase family E4187_14355 PF03626 Prokaryotic Cytochrome C oxidase subunit IV E4187_14360 PF00510 Cytochrome c oxidase subunit III E4187_14365 PF00115 Cytochrome C and Quinol oxidase polypeptide I E4187_14370 PF00116 Cytochrome C oxidase subunit II, periplasmic domain E4187_14370 PF06481 COX Aromatic Rich Motif E4187_14375 PF02627 Carboxymuconolactone decarboxylase family E4187_14380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_14380 PF03466 LysR substrate binding domain E4187_14390 PF01156 Inosine-uridine preferring nucleoside hydrolase E4187_14405 PF00127 Copper binding proteins, plastocyanin/azurin family E4187_14410 PF02424 ApbE family E4187_14415 PF01609 Transposase DDE domain E4187_14415 PF13006 Insertion element 4 transposase N-terminal E4187_14420 PF00011 Hsp20/alpha crystallin family E4187_14430 PF12323 Helix-turn-helix domain E4187_14445 PF03372 Endonuclease/Exonuclease/phosphatase family E4187_14455 PF00529 HlyD membrane-fusion protein of T1SS E4187_14455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4187_14460 PF00873 AcrB/AcrD/AcrF family E4187_14475 PF10437 Bacterial lipoate protein ligase C-terminus E4187_14475 PF03099 Biotin/lipoate A/B protein ligase family E4187_14480 PF03707 Bacterial signalling protein N terminal repeat E4187_14480 PF00990 Diguanylate cyclase, GGDEF domain E4187_14480 PF00563 EAL domain E4187_14485 PF00873 AcrB/AcrD/AcrF family E4187_14500 PF04143 Sulphur transport E4187_14520 PF02308 MgtC family E4187_14525 PF13407 Periplasmic binding protein domain E4187_14525 PF00356 Bacterial regulatory proteins, lacI family E4187_14530 PF08244 Glycosyl hydrolases family 32 C terminal E4187_14530 PF00251 Glycosyl hydrolases family 32 N-terminal domain E4187_14535 PF00367 phosphotransferase system, EIIB E4187_14535 PF02378 Phosphotransferase system, EIIC E4187_14540 PF00294 pfkB family carbohydrate kinase E4187_14545 PF11471 Maltoporin periplasmic N-terminal extension E4187_14545 PF02264 LamB porin E4187_14550 PF00684 DnaJ central domain E4187_14550 PF00226 DnaJ domain E4187_14550 PF01556 DnaJ C terminal domain E4187_14555 PF00012 Hsp70 protein E4187_14560 PF01025 GrpE E4187_14565 PF01513 ATP-NAD kinase E4187_14575 PF02463 RecF/RecN/SMC N terminal domain E4187_14580 PF01368 DHH family E4187_14580 PF02833 DHHA2 domain E4187_14590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4187_14595 PF00005 ABC transporter E4187_14595 PF12704 MacB-like periplasmic core domain E4187_14595 PF02687 FtsX-like permease family E4187_14600 PF02321 Outer membrane efflux protein E4187_14605 PF04954 Siderophore-interacting protein E4187_14605 PF08021 Siderophore-interacting FAD-binding domain E4187_14610 PF00793 DAHP synthetase I family E4187_14615 PF00816 H-NS histone family E4187_14620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_14620 PF03466 LysR substrate binding domain E4187_14625 PF02447 GntP family permease E4187_14630 PF00291 Pyridoxal-phosphate dependent enzyme E4187_14640 PF00180 Isocitrate/isopropylmalate dehydrogenase E4187_14645 PF12833 Helix-turn-helix domain E4187_14650 PF01238 Phosphomannose isomerase type I E4187_14655 PF10688 Bacterial inner membrane protein E4187_14670 PF11999 Protein of unknown function (DUF3494) E4187_14670 PF02368 Bacterial Ig-like domain (group 2) E4187_14680 PF13592 Winged helix-turn helix E4187_14680 PF13358 DDE superfamily endonuclease E4187_14690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_14690 PF03466 LysR substrate binding domain E4187_14695 PF00665 Integrase core domain E4187_14700 PF01695 IstB-like ATP binding protein E4187_14735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4187_14735 PF02378 Phosphotransferase system, EIIC E4187_14735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E4187_14740 PF07690 Major Facilitator Superfamily E4187_14745 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E4187_14755 PF00849 RNA pseudouridylate synthase E4187_14760 PF00293 NUDIX domain E4187_14770 PF04356 Protein of unknown function (DUF489) E4187_14775 PF08328 Adenylosuccinate lyase C-terminal E4187_14775 PF00206 Lyase E4187_14780 PF08007 Cupin superfamily protein E4187_14785 PF02887 Pyruvate kinase, alpha/beta domain E4187_14785 PF00224 Pyruvate kinase, barrel domain E4187_14790 PF12795 Mechanosensitive ion channel porin domain E4187_14790 PF12794 Mechanosensitive ion channel inner membrane domain 1 E4187_14790 PF00924 Mechanosensitive ion channel E4187_14795 PF01810 LysE type translocator E4187_14800 PF10282 Lactonase, 7-bladed beta-propeller E4187_14815 PF00860 Permease family E4187_14820 PF03949 Malic enzyme, NAD binding domain E4187_14820 PF00390 Malic enzyme, N-terminal domain E4187_14825 PF12804 MobA-like NTP transferase domain E4187_14830 PF03205 Molybdopterin guanine dinucleotide synthesis protein B E4187_14845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_14845 PF08447 PAS fold E4187_14845 PF13426 PAS domain E4187_14865 PF05114 Protein of unknown function (DUF692) E4187_14895 PF13474 SnoaL-like domain E4187_14900 PF00291 Pyridoxal-phosphate dependent enzyme E4187_14900 PF14821 Threonine synthase N terminus E4187_14905 PF08544 GHMP kinases C terminal E4187_14905 PF00288 GHMP kinases N terminal domain E4187_14910 PF00696 Amino acid kinase family E4187_14910 PF01842 ACT domain E4187_14910 PF00742 Homoserine dehydrogenase E4187_14910 PF03447 Homoserine dehydrogenase, NAD binding domain E4187_14910 PF13840 ACT domain E4187_14920 PF00588 SpoU rRNA Methylase family E4187_14925 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) E4187_14930 PF03466 LysR substrate binding domain E4187_14930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_14935 PF01243 Pyridoxamine 5'-phosphate oxidase E4187_14935 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region E4187_14960 PF01189 16S rRNA methyltransferase RsmB/F E4187_14960 PF01029 NusB family E4187_14965 PF00462 Glutaredoxin E4187_14970 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E4187_14970 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E4187_14975 PF04333 MlaA lipoprotein E4187_14985 PF03918 Cytochrome C biogenesis protein E4187_14990 PF08534 Redoxin E4187_14995 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal E4187_14995 PF01578 Cytochrome C assembly protein E4187_15000 PF03100 CcmE E4187_15005 PF04995 Heme exporter protein D (CcmD) E4187_15010 PF01578 Cytochrome C assembly protein E4187_15015 PF03379 CcmB protein E4187_15030 PF01584 CheW-like domain E4187_15040 PF13614 AAA domain E4187_15045 PF13677 Membrane MotB of proton-channel complex MotA/MotB E4187_15045 PF00691 OmpA family E4187_15050 PF01618 MotA/TolQ/ExbB proton channel family E4187_15055 PF00072 Response regulator receiver domain E4187_15055 PF01339 CheB methylesterase E4187_15060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_15060 PF02895 Signal transducing histidine kinase, homodimeric domain E4187_15060 PF01584 CheW-like domain E4187_15060 PF01627 Hpt domain E4187_15060 PF00072 Response regulator receiver domain E4187_15065 PF04344 Chemotaxis phosphatase, CheZ E4187_15070 PF00072 Response regulator receiver domain E4187_15075 PF04542 Sigma-70 region 2 E4187_15075 PF04545 Sigma-70, region 4 E4187_15075 PF04539 Sigma-70 region 3 E4187_15080 PF10609 NUBPL iron-transfer P-loop NTPase E4187_15085 PF00448 SRP54-type protein, GTPase domain E4187_15090 PF00771 FHIPEP family E4187_15095 PF01312 FlhB HrpN YscU SpaS Family E4187_15105 PF01311 Bacterial export proteins, family 1 E4187_15110 PF01313 Bacterial export proteins, family 3 E4187_15115 PF00813 FliP family E4187_15120 PF00813 FliP family E4187_15125 PF04347 Flagellar biosynthesis protein, FliO E4187_15130 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4187_15135 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4187_15135 PF02154 Flagellar motor switch protein FliM E4187_15155 PF18269 T3SS EscN ATPase C-terminal domain E4187_15155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4187_15165 PF01706 FliG C-terminal domain E4187_15165 PF14841 FliG middle domain E4187_15165 PF14842 FliG N-terminal domain E4187_15170 PF08345 Flagellar M-ring protein C-terminal E4187_15170 PF01514 Secretory protein of YscJ/FliF family E4187_15175 PF02049 Flagellar hook-basal body complex protein FliE E4187_15185 PF18693 TRAM domain E4187_15185 PF00919 Uncharacterized protein family UPF0004 E4187_15185 PF04055 Radical SAM superfamily E4187_15190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4187_15195 PF00528 Binding-protein-dependent transport system inner membrane component E4187_15200 PF00528 Binding-protein-dependent transport system inner membrane component E4187_15200 PF12911 N-terminal TM domain of oligopeptide transport permease C E4187_15205 PF00005 ABC transporter E4187_15205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4187_15210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4187_15210 PF00005 ABC transporter E4187_15220 PF01869 BadF/BadG/BcrA/BcrD ATPase family E4187_15230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_15230 PF08447 PAS fold E4187_15240 PF01131 DNA topoisomerase E4187_15240 PF08272 Topoisomerase I zinc-ribbon-like E4187_15240 PF01396 Topoisomerase DNA binding C4 zinc finger E4187_15240 PF01751 Toprim domain E4187_15245 PF04996 Succinylarginine dihydrolase E4187_15250 PF01343 Peptidase family S49 E4187_15250 PF08496 Peptidase family S49 N-terminal E4187_15255 PF00106 short chain dehydrogenase E4187_15260 PF03466 LysR substrate binding domain E4187_15260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_15265 PF07690 Major Facilitator Superfamily E4187_15270 PF00155 Aminotransferase class I and II E4187_15280 PF03466 LysR substrate binding domain E4187_15280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_15290 PF01161 Phosphatidylethanolamine-binding protein E4187_15300 PF01204 Trehalase E4187_15305 PF00579 tRNA synthetases class I (W and Y) E4187_15310 PF01476 LysM domain E4187_15310 PF08525 Opacity-associated protein A N-terminal motif E4187_15310 PF01551 Peptidase family M23 E4187_15315 PF03702 Anhydro-N-acetylmuramic acid kinase E4187_15325 PF13808 DDE_Tnp_1-associated E4187_15325 PF01609 Transposase DDE domain E4187_15360 PF02779 Transketolase, pyrimidine binding domain E4187_15360 PF02780 Transketolase, C-terminal domain E4187_15360 PF00456 Transketolase, thiamine diphosphate binding domain E4187_15365 PF00438 S-adenosylmethionine synthetase, N-terminal domain E4187_15365 PF02772 S-adenosylmethionine synthetase, central domain E4187_15365 PF02773 S-adenosylmethionine synthetase, C-terminal domain E4187_15370 PF10263 SprT-like family E4187_15375 PF04231 Endonuclease I E4187_15380 PF04452 RNA methyltransferase E4187_15385 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain E4187_15385 PF02951 Prokaryotic glutathione synthetase, N-terminal domain E4187_15390 PF02622 Uncharacterized ACR, COG1678 E4187_15405 PF03652 Holliday junction resolvase E4187_15410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_15410 PF03466 LysR substrate binding domain E4187_15415 PF07690 Major Facilitator Superfamily E4187_15425 PF13006 Insertion element 4 transposase N-terminal E4187_15425 PF01609 Transposase DDE domain E4187_15435 PF01235 Sodium:alanine symporter family E4187_15440 PF00923 Transaldolase/Fructose-6-phosphate aldolase E4187_15455 PF03167 Uracil DNA glycosylase superfamily E4187_15460 PF01228 Glycine radical E4187_15470 PF02371 Transposase IS116/IS110/IS902 family E4187_15470 PF01548 Transposase E4187_15475 PF01609 Transposase DDE domain E4187_15485 PF00793 DAHP synthetase I family E4187_15490 PF13369 Transglutaminase-like superfamily E4187_15500 PF13847 Methyltransferase domain E4187_15500 PF17827 PrmC N-terminal domain E4187_15505 PF00472 RF-1 domain E4187_15505 PF03462 PCRF domain E4187_15510 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain E4187_15510 PF01488 Shikimate / quinate 5-dehydrogenase E4187_15510 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain E4187_15515 PF03550 Outer membrane lipoprotein LolB E4187_15520 PF08544 GHMP kinases C terminal E4187_15520 PF00288 GHMP kinases N terminal domain E4187_15530 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase E4187_15530 PF14572 Phosphoribosyl synthetase-associated domain E4187_15535 PF02872 5'-nucleotidase, C-terminal domain E4187_15535 PF00149 Calcineurin-like phosphoesterase E4187_15540 PF01195 Peptidyl-tRNA hydrolase E4187_15545 PF01926 50S ribosome-binding GTPase E4187_15545 PF06071 Protein of unknown function (DUF933) E4187_15590 PF02080 TrkA-C domain E4187_15590 PF03600 Citrate transporter E4187_15600 PF07859 alpha/beta hydrolase fold E4187_15610 PF07690 Major Facilitator Superfamily E4187_15615 PF13419 Haloacid dehalogenase-like hydrolase E4187_15625 PF00171 Aldehyde dehydrogenase family E4187_15630 PF04958 Arginine N-succinyltransferase beta subunit E4187_15635 PF00202 Aminotransferase class-III E4187_15640 PF00117 Glutamine amidotransferase class-I E4187_15650 PF00579 tRNA synthetases class I (W and Y) E4187_15655 PF13419 Haloacid dehalogenase-like hydrolase E4187_15660 PF00834 Ribulose-phosphate 3 epimerase family E4187_15665 PF02086 D12 class N6 adenine-specific DNA methyltransferase E4187_15675 PF01761 3-dehydroquinate synthase E4187_15680 PF01202 Shikimate kinase E4187_15685 PF11741 AMIN domain E4187_15685 PF00263 Bacterial type II and III secretion system protein E4187_15685 PF03958 Bacterial type II/III secretion system short domain E4187_15685 PF07660 Secretin and TonB N terminus short domain E4187_15715 PF00905 Penicillin binding protein transpeptidase domain E4187_15715 PF00912 Transglycosylase E4187_15715 PF17092 Penicillin-binding protein OB-like domain E4187_15720 PF03466 LysR substrate binding domain E4187_15720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_15735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_15735 PF03466 LysR substrate binding domain E4187_15750 PF02753 Pili assembly chaperone PapD, C-terminal domain E4187_15750 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E4187_15755 PF00577 Outer membrane usher protein E4187_15755 PF13954 PapC N-terminal domain E4187_15755 PF13953 PapC C-terminal domain E4187_15760 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E4187_15760 PF02753 Pili assembly chaperone PapD, C-terminal domain E4187_15765 PF08525 Opacity-associated protein A N-terminal motif E4187_15765 PF01551 Peptidase family M23 E4187_15765 PF01476 LysM domain E4187_15775 PF00924 Mechanosensitive ion channel E4187_15775 PF12795 Mechanosensitive ion channel porin domain E4187_15775 PF12794 Mechanosensitive ion channel inner membrane domain 1 E4187_15780 PF03009 Glycerophosphoryl diester phosphodiesterase family E4187_15785 PF02743 Cache domain E4187_15785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_15785 PF00672 HAMP domain E4187_15790 PF00890 FAD binding domain E4187_15790 PF02910 Fumarate reductase flavoprotein C-term E4187_15795 PF13085 2Fe-2S iron-sulfur cluster binding domain E4187_15795 PF13183 4Fe-4S dicluster domain E4187_15800 PF02300 Fumarate reductase subunit C E4187_15805 PF02313 Fumarate reductase subunit D E4187_15810 PF06224 Winged helix DNA-binding domain E4187_15815 PF13649 Methyltransferase domain E4187_15825 PF00501 AMP-binding enzyme E4187_15835 PF00106 short chain dehydrogenase E4187_15845 PF00072 Response regulator receiver domain E4187_15845 PF00486 Transcriptional regulatory protein, C terminal E4187_15850 PF08521 Two-component sensor kinase N-terminal E4187_15850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_15850 PF00512 His Kinase A (phospho-acceptor) domain E4187_15860 PF00478 IMP dehydrogenase / GMP reductase domain E4187_15870 PF01132 Elongation factor P (EF-P) OB domain E4187_15870 PF08207 Elongation factor P (EF-P) KOW-like domain E4187_15870 PF09285 Elongation factor P, C-terminal E4187_15875 PF09997 Predicted membrane protein (DUF2238) E4187_15885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4187_15885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4187_15895 PF17152 Periplasmic sensor domain E4187_15895 PF00990 Diguanylate cyclase, GGDEF domain E4187_15905 PF17151 Periplasmic sensor domain E4187_15905 PF00990 Diguanylate cyclase, GGDEF domain E4187_15910 PF13419 Haloacid dehalogenase-like hydrolase E4187_15920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_15920 PF03466 LysR substrate binding domain E4187_15925 PF00313 'Cold-shock' DNA-binding domain E4187_15930 PF01494 FAD binding domain E4187_15935 PF01938 TRAM domain E4187_15935 PF00919 Uncharacterized protein family UPF0004 E4187_15935 PF04055 Radical SAM superfamily E4187_15940 PF02562 PhoH-like protein E4187_15945 PF02130 Uncharacterized protein family UPF0054 E4187_15950 PF03471 Transporter associated domain E4187_15950 PF00571 CBS domain E4187_15955 PF00795 Carbon-nitrogen hydrolase E4187_15960 PF07295 Zinc-ribbon containing domain E4187_15965 PF08264 Anticodon-binding domain of tRNA E4187_15965 PF00133 tRNA synthetases class I (I, L, M and V) E4187_15965 PF13603 Leucyl-tRNA synthetase, Domain 2 E4187_15980 PF01467 Cytidylyltransferase-like E4187_15990 PF02590 Predicted SPOUT methyltransferase E4187_15995 PF03717 Penicillin-binding Protein dimerisation domain E4187_15995 PF00905 Penicillin binding protein transpeptidase domain E4187_16000 PF01098 Cell cycle protein E4187_16005 PF13406 Transglycosylase SLT domain E4187_16010 PF05036 Sporulation related domain E4187_16010 PF03330 Lytic transglycolase E4187_16015 PF00768 D-alanyl-D-alanine carboxypeptidase E4187_16015 PF07943 Penicillin-binding protein 5, C-terminal domain E4187_16020 PF04359 Protein of unknown function (DUF493) E4187_16025 PF03099 Biotin/lipoate A/B protein ligase family E4187_16035 PF04055 Radical SAM superfamily E4187_16035 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family E4187_16045 PF02508 Rnf-Nqr subunit, membrane protein E4187_16055 PF02272 DHHA1 domain E4187_16055 PF01368 DHH family E4187_16055 PF17768 RecJ OB domain E4187_16060 PF00158 Sigma-54 interaction domain E4187_16060 PF00072 Response regulator receiver domain E4187_16060 PF02954 Bacterial regulatory protein, Fis family E4187_16080 PF00589 Phage integrase family E4187_16080 PF02899 Phage integrase, N-terminal SAM-like domain E4187_16085 PF00258 Flavodoxin E4187_16095 PF01523 Putative modulator of DNA gyrase E4187_16100 PF01523 Putative modulator of DNA gyrase E4187_16110 PF03734 L,D-transpeptidase catalytic domain E4187_16110 PF17969 L,D-transpeptidase C-terminal domain E4187_16120 PF12838 4Fe-4S dicluster domain E4187_16130 PF01609 Transposase DDE domain E4187_16130 PF13006 Insertion element 4 transposase N-terminal E4187_16140 PF02635 DsrE/DsrF-like family E4187_16145 PF07690 Major Facilitator Superfamily E4187_16150 PF03725 3' exoribonuclease family, domain 2 E4187_16150 PF00575 S1 RNA binding domain E4187_16150 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain E4187_16150 PF00013 KH domain E4187_16150 PF01138 3' exoribonuclease family, domain 1 E4187_16155 PF00312 Ribosomal protein S15 E4187_16160 PF01509 TruB family pseudouridylate synthase (N terminal domain) E4187_16160 PF16198 tRNA pseudouridylate synthase B C-terminal domain E4187_16160 PF09157 Pseudouridine synthase II TruB, C-terminal E4187_16165 PF02033 Ribosome-binding factor A E4187_16170 PF11987 Translation-initiation factor 2 E4187_16170 PF08364 Bacterial translation initiation factor IF-2 associated region E4187_16170 PF00009 Elongation factor Tu GTP binding domain E4187_16170 PF04760 Translation initiation factor IF-2, N-terminal region E4187_16175 PF13184 NusA-like KH domain E4187_16175 PF08529 NusA N-terminal domain E4187_16175 PF00575 S1 RNA binding domain E4187_16180 PF02576 RimP N-terminal domain E4187_16180 PF17384 RimP C-terminal SH3 domain E4187_16195 PF03840 Preprotein translocase SecG subunit E4187_16200 PF00121 Triosephosphate isomerase E4187_16205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4187_16205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4187_16205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4187_16205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4187_16210 PF00809 Pterin binding enzyme E4187_16215 PF06480 FtsH Extracellular E4187_16215 PF01434 Peptidase family M41 E4187_16215 PF00004 ATPase family associated with various cellular activities (AAA) E4187_16215 PF17862 AAA+ lid domain E4187_16220 PF01728 FtsJ-like methyltransferase E4187_16225 PF01985 CRS1 / YhbY (CRM) domain E4187_16235 PF03449 Transcription elongation factor, N-terminal E4187_16235 PF01272 Transcription elongation factor, GreA/GreB, C-term E4187_16240 PF13677 Membrane MotB of proton-channel complex MotA/MotB E4187_16240 PF00691 OmpA family E4187_16245 PF01618 MotA/TolQ/ExbB proton channel family E4187_16250 PF02609 Exonuclease VII small subunit E4187_16255 PF00348 Polyprenyl synthetase E4187_16260 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E4187_16260 PF02779 Transketolase, pyrimidine binding domain E4187_16260 PF02780 Transketolase, C-terminal domain E4187_16275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4187_16280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4187_16280 PF00005 ABC transporter E4187_16285 PF04608 Phosphatidylglycerophosphatase A E4187_16290 PF00586 AIR synthase related protein, N-terminal domain E4187_16290 PF02769 AIR synthase related protein, C-terminal domain E4187_16295 PF01029 NusB family E4187_16300 PF00885 6,7-dimethyl-8-ribityllumazine synthase E4187_16305 PF00925 GTP cyclohydrolase II E4187_16305 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase E4187_16310 PF00677 Lumazine binding domain E4187_16315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E4187_16315 PF01872 RibD C-terminal domain E4187_16320 PF03477 ATP cone domain E4187_16335 PF00464 Serine hydroxymethyltransferase E4187_16345 PF01627 Hpt domain E4187_16345 PF00512 His Kinase A (phospho-acceptor) domain E4187_16345 PF00672 HAMP domain E4187_16345 PF00072 Response regulator receiver domain E4187_16345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_16350 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E4187_16360 PF00486 Transcriptional regulatory protein, C terminal E4187_16360 PF00072 Response regulator receiver domain E4187_16365 PF03264 NapC/NirT cytochrome c family, N-terminal region E4187_16370 PF01568 Molydopterin dinucleotide binding domain E4187_16370 PF18364 Molybdopterin oxidoreductase N-terminal domain E4187_16370 PF00384 Molybdopterin oxidoreductase E4187_16375 PF02613 Nitrate reductase delta subunit E4187_16395 PF00501 AMP-binding enzyme E4187_16395 PF13193 AMP-binding enzyme C-terminal domain E4187_16395 PF16177 Acetyl-coenzyme A synthetase N-terminus E4187_16400 PF01220 Dehydroquinase class II E4187_16405 PF00364 Biotin-requiring enzyme E4187_16410 PF00289 Biotin carboxylase, N-terminal domain E4187_16410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E4187_16410 PF02785 Biotin carboxylase C-terminal domain E4187_16415 PF06196 Protein of unknown function (DUF997) E4187_16420 PF00474 Sodium:solute symporter family E4187_16425 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E4187_16425 PF00367 phosphotransferase system, EIIB E4187_16425 PF02378 Phosphotransferase system, EIIC E4187_16430 PF03466 LysR substrate binding domain E4187_16430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_16435 PF08240 Alcohol dehydrogenase GroES-like domain E4187_16435 PF00107 Zinc-binding dehydrogenase E4187_16445 PF14602 Hexapeptide repeat of succinyl-transferase E4187_16445 PF12464 Maltose acetyltransferase E4187_16450 PF00881 Nitroreductase family E4187_16455 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4187_16455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4187_16460 PF01343 Peptidase family S49 E4187_16475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E4187_16475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E4187_16480 PF07023 Protein of unknown function (DUF1315) E4187_16485 PF17763 Glutaminase/Asparaginase C-terminal domain E4187_16485 PF00710 Asparaginase, N-terminal E4187_16490 PF03616 Sodium/glutamate symporter E4187_16500 PF00563 EAL domain E4187_16500 PF13426 PAS domain E4187_16500 PF00990 Diguanylate cyclase, GGDEF domain E4187_16505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_16505 PF00672 HAMP domain E4187_16505 PF02743 Cache domain E4187_16515 PF00152 tRNA synthetases class II (D, K and N) E4187_16515 PF01336 OB-fold nucleic acid binding domain E4187_16520 PF02567 Phenazine biosynthesis-like protein E4187_16525 PF00667 FAD binding domain E4187_16525 PF00258 Flavodoxin E4187_16525 PF00175 Oxidoreductase NAD-binding domain E4187_16530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E4187_16530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E4187_16535 PF01507 Phosphoadenosine phosphosulfate reductase family E4187_16540 PF04069 Substrate binding domain of ABC-type glycine betaine transport system E4187_16545 PF00528 Binding-protein-dependent transport system inner membrane component E4187_16550 PF00571 CBS domain E4187_16550 PF00005 ABC transporter E4187_16555 PF00186 Dihydrofolate reductase E4187_16560 PF12821 Threonine/Serine exporter, ThrE E4187_16565 PF06738 Putative threonine/serine exporter E4187_16575 PF00994 Probable molybdopterin binding domain E4187_16585 PF02801 Beta-ketoacyl synthase, C-terminal domain E4187_16585 PF00109 Beta-ketoacyl synthase, N-terminal domain E4187_16600 PF00109 Beta-ketoacyl synthase, N-terminal domain E4187_16600 PF02801 Beta-ketoacyl synthase, C-terminal domain E4187_16625 PF00221 Aromatic amino acid lyase E4187_16635 PF07977 FabA-like domain E4187_16640 PF00501 AMP-binding enzyme E4187_16640 PF13193 AMP-binding enzyme C-terminal domain E4187_16650 PF00550 Phosphopantetheine attachment site E4187_16655 PF00550 Phosphopantetheine attachment site E4187_16680 PF13737 Transposase DDE domain E4187_16700 PF00194 Eukaryotic-type carbonic anhydrase E4187_16705 PF04227 Indigoidine synthase A like protein E4187_16710 PF00294 pfkB family carbohydrate kinase E4187_16715 PF18267 Rubredoxin NAD+ reductase C-terminal domain E4187_16715 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4187_16715 PF13806 Rieske-like [2Fe-2S] domain E4187_16715 PF04324 BFD-like [2Fe-2S] binding domain E4187_16715 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E4187_16715 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E4187_16720 PF04324 BFD-like [2Fe-2S] binding domain E4187_16720 PF18267 Rubredoxin NAD+ reductase C-terminal domain E4187_16720 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E4187_16720 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E4187_16720 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4187_16720 PF13806 Rieske-like [2Fe-2S] domain E4187_16725 PF00005 ABC transporter E4187_16730 PF00528 Binding-protein-dependent transport system inner membrane component E4187_16735 PF00005 ABC transporter E4187_16750 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E4187_16750 PF00384 Molybdopterin oxidoreductase E4187_16750 PF04324 BFD-like [2Fe-2S] binding domain E4187_16750 PF01568 Molydopterin dinucleotide binding domain E4187_16765 PF00582 Universal stress protein family E4187_16775 PF00171 Aldehyde dehydrogenase family E4187_16780 PF00696 Amino acid kinase family E4187_16780 PF01472 PUA domain E4187_16785 PF07417 Sigma factor-binding transcriptional regulator Crl E4187_16795 PF00156 Phosphoribosyl transferase domain E4187_16810 PF07687 Peptidase dimerisation domain E4187_16810 PF01546 Peptidase family M20/M25/M40 E4187_16820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4187_16820 PF00005 ABC transporter E4187_16825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4187_16825 PF00005 ABC transporter E4187_16830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4187_16835 PF00528 Binding-protein-dependent transport system inner membrane component E4187_16835 PF12911 N-terminal TM domain of oligopeptide transport permease C E4187_16840 PF00528 Binding-protein-dependent transport system inner membrane component E4187_16845 PF00593 TonB dependent receptor E4187_16845 PF07715 TonB-dependent Receptor Plug Domain E4187_16855 PF01618 MotA/TolQ/ExbB proton channel family E4187_16860 PF01618 MotA/TolQ/ExbB proton channel family E4187_16865 PF02472 Biopolymer transport protein ExbD/TolR E4187_16880 PF00704 Glycosyl hydrolases family 18 E4187_16880 PF06483 Chitinase C E4187_16910 PF00749 tRNA synthetases class I (E and Q), catalytic domain E4187_16915 PF00749 tRNA synthetases class I (E and Q), catalytic domain E4187_16920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_16920 PF00672 HAMP domain E4187_16930 PF00313 'Cold-shock' DNA-binding domain E4187_16970 PF00929 Exonuclease E4187_16975 PF03193 RsgA GTPase E4187_16980 PF02666 Phosphatidylserine decarboxylase E4187_16985 PF09905 DNA-binding protein VF530 E4187_17000 PF02627 Carboxymuconolactone decarboxylase family E4187_17005 PF12833 Helix-turn-helix domain E4187_17005 PF12852 Cupin E4187_17015 PF00990 Diguanylate cyclase, GGDEF domain E4187_17015 PF00563 EAL domain E4187_17015 PF03707 Bacterial signalling protein N terminal repeat E4187_17020 PF06877 Regulator of ribonuclease activity B E4187_17025 PF05547 Immune inhibitor A peptidase M6 E4187_17025 PF00801 PKD domain E4187_17030 PF16363 GDP-mannose 4,6 dehydratase E4187_17035 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain E4187_17035 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain E4187_17040 PF00288 GHMP kinases N terminal domain E4187_17040 PF08544 GHMP kinases C terminal E4187_17040 PF10509 Galactokinase galactose-binding signature E4187_17045 PF01263 Aldose 1-epimerase E4187_17050 PF04193 PQ loop repeat E4187_17055 PF00356 Bacterial regulatory proteins, lacI family E4187_17075 PF05598 Transposase domain (DUF772) E4187_17075 PF01609 Transposase DDE domain E4187_17080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_17080 PF03466 LysR substrate binding domain E4187_17100 PF00561 alpha/beta hydrolase fold E4187_17105 PF00005 ABC transporter E4187_17105 PF00664 ABC transporter transmembrane region E4187_17110 PF06004 Bacterial protein of unknown function (DUF903) E4187_17115 PF00581 Rhodanese-like domain E4187_17120 PF04960 Glutaminase E4187_17125 PF04320 Protein with unknown function (DUF469) E4187_17130 PF02390 Putative methyltransferase E4187_17135 PF01483 Proprotein convertase P-domain E4187_17135 PF04389 Peptidase family M28 E4187_17140 PF00155 Aminotransferase class I and II E4187_17145 PF00563 EAL domain E4187_17145 PF12792 CSS motif domain associated with EAL E4187_17150 PF08338 Domain of unknown function (DUF1731) E4187_17150 PF01370 NAD dependent epimerase/dehydratase family E4187_17160 PF00005 ABC transporter E4187_17165 PF13472 GDSL-like Lipase/Acylhydrolase family E4187_17170 PF00072 Response regulator receiver domain E4187_17170 PF01584 CheW-like domain E4187_17175 PF00267 Gram-negative porin E4187_17180 PF00571 CBS domain E4187_17185 PF12848 ABC transporter E4187_17185 PF00005 ABC transporter E4187_17195 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ E4187_17225 PF01609 Transposase DDE domain E4187_17225 PF05598 Transposase domain (DUF772) E4187_17250 PF00474 Sodium:solute symporter family E4187_17255 PF17969 L,D-transpeptidase C-terminal domain E4187_17255 PF03734 L,D-transpeptidase catalytic domain E4187_17260 PF00924 Mechanosensitive ion channel E4187_17265 PF00871 Acetokinase family E4187_17270 PF04074 YhcH/YjgK/YiaL E4187_17280 PF13302 Acetyltransferase (GNAT) domain E4187_17285 PF13302 Acetyltransferase (GNAT) domain E4187_17290 PF04151 Bacterial pre-peptidase C-terminal domain E4187_17290 PF02868 Thermolysin metallopeptidase, alpha-helical domain E4187_17290 PF03413 Peptidase propeptide and YPEB domain E4187_17290 PF07504 Fungalysin/Thermolysin Propeptide Motif E4187_17290 PF01447 Thermolysin metallopeptidase, catalytic domain E4187_17295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_17295 PF03466 LysR substrate binding domain E4187_17300 PF07690 Major Facilitator Superfamily E4187_17310 PF02080 TrkA-C domain E4187_17310 PF06826 Predicted Permease Membrane Region E4187_17315 PF03006 Haemolysin-III related E4187_17320 PF00282 Pyridoxal-dependent decarboxylase conserved domain E4187_17325 PF04279 Intracellular septation protein A E4187_17330 PF03795 YCII-related domain E4187_17335 PF00459 Inositol monophosphatase family E4187_17345 PF00483 Nucleotidyl transferase E4187_17350 PF00854 POT family E4187_17355 PF00072 Response regulator receiver domain E4187_17385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4187_17395 PF01207 Dihydrouridine synthase (Dus) E4187_17400 PF02954 Bacterial regulatory protein, Fis family E4187_17425 PF01420 Type I restriction modification DNA specificity domain E4187_17435 PF01695 IstB-like ATP binding protein E4187_17440 PF00665 Integrase core domain E4187_17450 PF00665 Integrase core domain E4187_17455 PF13340 Putative transposase of IS4/5 family (DUF4096) E4187_17460 PF01627 Hpt domain E4187_17460 PF00072 Response regulator receiver domain E4187_17460 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E4187_17460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_17460 PF00672 HAMP domain E4187_17460 PF00512 His Kinase A (phospho-acceptor) domain E4187_17465 PF03707 Bacterial signalling protein N terminal repeat E4187_17465 PF00990 Diguanylate cyclase, GGDEF domain E4187_17465 PF00563 EAL domain E4187_17485 PF01548 Transposase E4187_17485 PF02371 Transposase IS116/IS110/IS902 family E4187_17500 PF01609 Transposase DDE domain E4187_17500 PF13808 DDE_Tnp_1-associated E4187_17510 PF00990 Diguanylate cyclase, GGDEF domain E4187_17510 PF03707 Bacterial signalling protein N terminal repeat E4187_17510 PF00563 EAL domain E4187_17520 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A E4187_17570 PF04002 RadC-like JAB domain E4187_17620 PF05930 Prophage CP4-57 regulatory protein (AlpA) E4187_17635 PF00816 H-NS histone family E4187_17655 PF01810 LysE type translocator E4187_17680 PF01521 Iron-sulphur cluster biosynthesis E4187_17690 PF00654 Voltage gated chloride channel E4187_17695 PF00202 Aminotransferase class-III E4187_17710 PF01569 PAP2 superfamily E4187_17720 PF03466 LysR substrate binding domain E4187_17720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_17725 PF00893 Small Multidrug Resistance protein E4187_17730 PF00893 Small Multidrug Resistance protein E4187_17735 PF01609 Transposase DDE domain E4187_17735 PF13006 Insertion element 4 transposase N-terminal E4187_17740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4187_17745 PF14814 Bifunctional transglycosylase second domain E4187_17745 PF00912 Transglycosylase E4187_17745 PF00905 Penicillin binding protein transpeptidase domain E4187_17750 PF08482 ATP-dependent helicase C-terminal E4187_17750 PF00271 Helicase conserved C-terminal domain E4187_17750 PF04408 Helicase associated domain (HA2) E4187_17750 PF00270 DEAD/DEAH box helicase E4187_17755 PF02834 LigT like Phosphoesterase E4187_17760 PF17746 SfsA N-terminal OB domain E4187_17760 PF03749 Sugar fermentation stimulation protein RE domain E4187_17765 PF01258 Prokaryotic dksA/traR C4-type zinc finger E4187_17770 PF00749 tRNA synthetases class I (E and Q), catalytic domain E4187_17775 PF01743 Poly A polymerase head domain E4187_17775 PF12627 Probable RNA and SrmB- binding site of polymerase A E4187_17775 PF12626 Polymerase A arginine-rich C-terminus E4187_17780 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) E4187_17785 PF02548 Ketopantoate hydroxymethyltransferase E4187_17790 PF02569 Pantoate-beta-alanine ligase E4187_17800 PF01061 ABC-2 type transporter E4187_17805 PF00005 ABC transporter E4187_17810 PF00156 Phosphoribosyl transferase domain E4187_17815 PF00440 Bacterial regulatory proteins, tetR family E4187_17820 PF02441 Flavoprotein E4187_17825 PF08245 Mur ligase middle domain E4187_17825 PF01225 Mur ligase family, catalytic domain E4187_17825 PF02875 Mur ligase family, glutamate ligase domain E4187_17830 PF00719 Inorganic pyrophosphatase E4187_17845 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) E4187_17860 PF00005 ABC transporter E4187_17895 PF05598 Transposase domain (DUF772) E4187_17895 PF01609 Transposase DDE domain E4187_17910 PF02080 TrkA-C domain E4187_17910 PF03600 Citrate transporter E4187_17915 PF00009 Elongation factor Tu GTP binding domain E4187_17920 PF01507 Phosphoadenosine phosphosulfate reductase family E4187_17925 PF10414 Sirohaem synthase dimerisation region E4187_17925 PF14824 Sirohaem biosynthesis protein central E4187_17925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4187_17930 PF01145 SPFH domain / Band 7 family E4187_17930 PF16200 C-terminal region of band_7 E4187_17935 PF01957 NfeD-like C-terminal, partner-binding E4187_17945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E4187_17945 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E4187_17950 PF07690 Major Facilitator Superfamily E4187_17955 PF01725 Ham1 family E4187_17960 PF04055 Radical SAM superfamily E4187_17960 PF06969 HemN C-terminal domain E4187_17965 PF03889 Alternative ribosome-rescue factor A E4187_17975 PF13411 MerR HTH family regulatory protein E4187_17980 PF01808 AICARFT/IMPCHase bienzyme E4187_17980 PF02142 MGS-like domain E4187_17985 PF02843 Phosphoribosylglycinamide synthetase, C domain E4187_17985 PF02844 Phosphoribosylglycinamide synthetase, N domain E4187_17985 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E4187_18000 PF00128 Alpha amylase, catalytic domain E4187_18010 PF00665 Integrase core domain E4187_18015 PF01695 IstB-like ATP binding protein E4187_18025 PF00140 Sigma-70 factor, region 1.2 E4187_18025 PF03979 Sigma-70 factor, region 1.1 E4187_18025 PF04542 Sigma-70 region 2 E4187_18025 PF04546 Sigma-70, non-essential region E4187_18025 PF04539 Sigma-70 region 3 E4187_18025 PF04545 Sigma-70, region 4 E4187_18030 PF01807 CHC2 zinc finger E4187_18030 PF08278 DNA primase DnaG DnaB-binding E4187_18030 PF08275 DNA primase catalytic core, N-terminal domain E4187_18030 PF10410 DnaB-helicase binding domain of primase E4187_18035 PF09424 Yqey-like protein E4187_18040 PF01165 Ribosomal protein S21 E4187_18045 PF00814 Glycoprotease family E4187_18050 PF04542 Sigma-70 region 2 E4187_18050 PF04539 Sigma-70 region 3 E4187_18050 PF00140 Sigma-70 factor, region 1.2 E4187_18050 PF04545 Sigma-70, region 4 E4187_18055 PF01476 LysM domain E4187_18055 PF01551 Peptidase family M23 E4187_18060 PF09335 SNARE associated Golgi protein E4187_18070 PF01975 Survival protein SurE E4187_18075 PF01142 tRNA pseudouridine synthase D (TruD) E4187_18080 PF02542 YgbB family E4187_18085 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E4187_18090 PF04977 Septum formation initiator E4187_18095 PF03952 Enolase, N-terminal domain E4187_18095 PF00113 Enolase, C-terminal TIM barrel domain E4187_18100 PF00117 Glutamine amidotransferase class-I E4187_18100 PF06418 CTP synthase N-terminus E4187_18105 PF03819 MazG nucleotide pyrophosphohydrolase domain E4187_18110 PF02824 TGS domain E4187_18110 PF04607 Region found in RelA / SpoT proteins E4187_18110 PF13291 ACT domain E4187_18115 PF05958 tRNA (Uracil-5-)-methyltransferase E4187_18115 PF01938 TRAM domain E4187_18120 PF00672 HAMP domain E4187_18120 PF00072 Response regulator receiver domain E4187_18120 PF01627 Hpt domain E4187_18120 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E4187_18120 PF00512 His Kinase A (phospho-acceptor) domain E4187_18120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_18125 PF07308 Protein of unknown function (DUF1456) E4187_18130 PF01510 N-acetylmuramoyl-L-alanine amidase E4187_18135 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ E4187_18140 PF11967 Recombination protein O N terminal E4187_18140 PF02565 Recombination protein O C terminal E4187_18145 PF07650 KH domain E4187_18145 PF01926 50S ribosome-binding GTPase E4187_18150 PF00035 Double-stranded RNA binding motif E4187_18150 PF14622 Ribonuclease-III-like E4187_18155 PF10502 Signal peptidase, peptidase S26 E4187_18160 PF06421 GTP-binding protein LepA C-terminus E4187_18160 PF03144 Elongation factor Tu domain 2 E4187_18160 PF00009 Elongation factor Tu GTP binding domain E4187_18160 PF00679 Elongation factor G C-terminus E4187_18170 PF03888 MucB/RseB N-terminal domain E4187_18170 PF17188 MucB/RseB C-terminal domain E4187_18175 PF03872 Anti sigma-E protein RseA, N-terminal domain E4187_18175 PF03873 Anti sigma-E protein RseA, C-terminal domain E4187_18180 PF04542 Sigma-70 region 2 E4187_18180 PF08281 Sigma-70, region 4 E4187_18185 PF00890 FAD binding domain E4187_18185 PF02910 Fumarate reductase flavoprotein C-term E4187_18195 PF03937 Flavinator of succinate dehydrogenase E4187_18200 PF01571 Aminomethyltransferase folate-binding domain E4187_18205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_18205 PF03466 LysR substrate binding domain E4187_18220 PF03091 CutA1 divalent ion tolerance protein E4187_18225 PF11412 Disulphide bond corrector protein DsbC E4187_18225 PF02683 Cytochrome C biogenesis protein transmembrane region E4187_18235 PF01266 FAD dependent oxidoreductase E4187_18240 PF01116 Fructose-bisphosphate aldolase class-II E4187_18245 PF00162 Phosphoglycerate kinase E4187_18250 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E4187_18250 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E4187_18255 PF00480 ROK family E4187_18260 PF01208 Uroporphyrinogen decarboxylase (URO-D) E4187_18265 PF00293 NUDIX domain E4187_18265 PF09297 NADH pyrophosphatase zinc ribbon domain E4187_18270 PF08239 Bacterial SH3 domain E4187_18275 PF00027 Cyclic nucleotide-binding domain E4187_18275 PF00520 Ion transport protein E4187_18280 PF02743 Cache domain E4187_18280 PF00672 HAMP domain E4187_18280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_18290 PF08335 GlnD PII-uridylyltransferase E4187_18290 PF03710 Glutamate-ammonia ligase adenylyltransferase E4187_18305 PF05170 AsmA family E4187_18310 PF00326 Prolyl oligopeptidase family E4187_18310 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4187_18315 PF13194 Domain of unknown function (DUF4010) E4187_18320 PF14602 Hexapeptide repeat of succinyl-transferase E4187_18320 PF12464 Maltose acetyltransferase E4187_18335 PF01609 Transposase DDE domain E4187_18335 PF05598 Transposase domain (DUF772) E4187_18345 PF14698 Argininosuccinate lyase C-terminal E4187_18345 PF00206 Lyase E4187_18350 PF00764 Arginosuccinate synthase E4187_18355 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4187_18355 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4187_18360 PF00696 Amino acid kinase family E4187_18365 PF01118 Semialdehyde dehydrogenase, NAD binding domain E4187_18365 PF02774 Semialdehyde dehydrogenase, dimerisation domain E4187_18370 PF07687 Peptidase dimerisation domain E4187_18370 PF01546 Peptidase family M20/M25/M40 E4187_18375 PF00311 Phosphoenolpyruvate carboxylase E4187_18380 PF05231 MASE1 E4187_18380 PF00563 EAL domain E4187_18380 PF13426 PAS domain E4187_18380 PF08448 PAS fold E4187_18380 PF08447 PAS fold E4187_18380 PF00990 Diguanylate cyclase, GGDEF domain E4187_18385 PF04073 Aminoacyl-tRNA editing domain E4187_18405 PF00392 Bacterial regulatory proteins, gntR family E4187_18405 PF00155 Aminotransferase class I and II E4187_18415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_18415 PF03466 LysR substrate binding domain E4187_18420 PF03788 LrgA family E4187_18425 PF04172 LrgB-like family E4187_18430 PF03447 Homoserine dehydrogenase, NAD binding domain E4187_18430 PF00742 Homoserine dehydrogenase E4187_18430 PF00696 Amino acid kinase family E4187_18435 PF01053 Cys/Met metabolism PLP-dependent enzyme E4187_18440 PF01340 Met Apo-repressor, MetJ E4187_18450 PF01588 Putative tRNA binding domain E4187_18455 PF03222 Tryptophan/tyrosine permease family E4187_18460 PF00459 Inositol monophosphatase family E4187_18465 PF00293 NUDIX domain E4187_18470 PF13419 Haloacid dehalogenase-like hydrolase E4187_18475 PF01479 S4 domain E4187_18475 PF00579 tRNA synthetases class I (W and Y) E4187_18480 PF00196 Bacterial regulatory proteins, luxR family E4187_18485 PF01203 Type II secretion system (T2SS), protein N E4187_18490 PF04612 Type II secretion system (T2SS), protein M E4187_18495 PF12693 GspL periplasmic domain E4187_18495 PF05134 Type II secretion system (T2SS), protein L E4187_18500 PF03934 Type II secretion system (T2SS), protein K E4187_18520 PF11612 Type II secretion system (T2SS), protein J E4187_18520 PF07963 Prokaryotic N-terminal methylation motif E4187_18525 PF07963 Prokaryotic N-terminal methylation motif E4187_18525 PF02501 Type II secretion system (T2SS), protein I E4187_18530 PF07963 Prokaryotic N-terminal methylation motif E4187_18530 PF12019 Type II transport protein GspH E4187_18535 PF07963 Prokaryotic N-terminal methylation motif E4187_18535 PF08334 Type II secretion system (T2SS), protein G E4187_18540 PF00482 Type II secretion system (T2SS), protein F E4187_18545 PF00437 Type II/IV secretion system protein E4187_18550 PF00263 Bacterial type II and III secretion system protein E4187_18550 PF03958 Bacterial type II/III secretion system short domain E4187_18555 PF11356 Type II secretion system protein C E4187_18560 PF01479 S4 domain E4187_18565 PF01430 Hsp33 protein E4187_18570 PF01293 Phosphoenolpyruvate carboxykinase E4187_18575 PF00392 Bacterial regulatory proteins, gntR family E4187_18580 PF01321 Creatinase/Prolidase N-terminal domain E4187_18580 PF00557 Metallopeptidase family M24 E4187_18590 PF05433 Glycine zipper 2TM domain E4187_18600 PF01865 Protein of unknown function DUF47 E4187_18605 PF01384 Phosphate transporter family E4187_18610 PF01743 Poly A polymerase head domain E4187_18610 PF12627 Probable RNA and SrmB- binding site of polymerase A E4187_18610 PF01966 HD domain E4187_18615 PF01471 Putative peptidoglycan binding domain E4187_18615 PF13401 AAA domain E4187_18620 PF16537 Type II secretion system protein B E4187_18625 PF14815 NUDIX domain E4187_18625 PF00730 HhH-GPD superfamily base excision DNA repair protein E4187_18625 PF10576 Iron-sulfur binding domain of endonuclease III E4187_18625 PF00633 Helix-hairpin-helix motif E4187_18630 PF04362 Bacterial Fe(2+) trafficking E4187_18635 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain E4187_18635 PF01464 Transglycosylase SLT domain E4187_18645 PF00657 GDSL-like Lipase/Acylhydrolase E4187_18650 PF00691 OmpA family E4187_18650 PF01389 OmpA-like transmembrane domain E4187_18655 PF03886 ABC-type transport auxiliary lipoprotein component E4187_18660 PF02470 MlaD protein E4187_18665 PF04403 Paraquat-inducible protein A E4187_18670 PF17209 Hfq protein E4187_18675 PF13419 Haloacid dehalogenase-like hydrolase E4187_18680 PF00563 EAL domain E4187_18680 PF00990 Diguanylate cyclase, GGDEF domain E4187_18680 PF01590 GAF domain E4187_18680 PF00360 Phytochrome region E4187_18685 PF00701 Dihydrodipicolinate synthetase family E4187_18690 PF08468 Methyltransferase small domain N-terminal E4187_18690 PF05175 Methyltransferase small domain E4187_18695 PF00483 Nucleotidyl transferase E4187_18700 PF08323 Starch synthase catalytic domain E4187_18700 PF00534 Glycosyl transferases group 1 E4187_18740 PF03553 Na+/H+ antiporter family E4187_18745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_18745 PF03466 LysR substrate binding domain E4187_18750 PF13416 Bacterial extracellular solute-binding protein E4187_18755 PF08402 TOBE domain E4187_18755 PF00005 ABC transporter E4187_18760 PF00528 Binding-protein-dependent transport system inner membrane component E4187_18765 PF00528 Binding-protein-dependent transport system inner membrane component E4187_18770 PF00171 Aldehyde dehydrogenase family E4187_18775 PF01040 UbiA prenyltransferase family E4187_18780 PF02628 Cytochrome oxidase assembly protein E4187_18800 PF00510 Cytochrome c oxidase subunit III E4187_18805 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 E4187_18810 PF00115 Cytochrome C and Quinol oxidase polypeptide I E4187_18815 PF00116 Cytochrome C oxidase subunit II, periplasmic domain E4187_18815 PF02790 Cytochrome C oxidase subunit II, transmembrane domain E4187_18820 PF17176 tRNA-binding domain E4187_18820 PF05127 Helicase E4187_18820 PF08351 Domain of unknown function (DUF1726) E4187_18820 PF13718 GNAT acetyltransferase 2 E4187_18830 PF04324 BFD-like [2Fe-2S] binding domain E4187_18835 PF00210 Ferritin-like domain E4187_18840 PF02142 MGS-like domain E4187_18855 PF00710 Asparaginase, N-terminal E4187_18855 PF17763 Glutaminase/Asparaginase C-terminal domain E4187_18865 PF00356 Bacterial regulatory proteins, lacI family E4187_18875 PF00480 ROK family E4187_18880 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit E4187_18885 PF00232 Glycosyl hydrolase family 1 E4187_18890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E4187_18890 PF02378 Phosphotransferase system, EIIC E4187_18895 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E4187_18900 PF02378 Phosphotransferase system, EIIC E4187_18910 PF00356 Bacterial regulatory proteins, lacI family E4187_18915 PF00367 phosphotransferase system, EIIB E4187_18915 PF02378 Phosphotransferase system, EIIC E4187_18920 PF00128 Alpha amylase, catalytic domain E4187_18920 PF11941 Domain of unknown function (DUF3459) E4187_18925 PF14602 Hexapeptide repeat of succinyl-transferase E4187_18925 PF12464 Maltose acetyltransferase E4187_18930 PF01037 Lrp/AsnC ligand binding domain E4187_18935 PF00892 EamA-like transporter family E4187_18960 PF00691 OmpA family E4187_18960 PF01389 OmpA-like transmembrane domain E4187_18985 PF02660 Glycerol-3-phosphate acyltransferase E4187_18990 PF02152 Dihydroneopterin aldolase E4187_18995 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) E4187_19005 PF07690 Major Facilitator Superfamily E4187_19010 PF07683 Cobalamin synthesis protein cobW C-terminal domain E4187_19010 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4187_19020 PF01810 LysE type translocator E4187_19025 PF03466 LysR substrate binding domain E4187_19025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_19030 PF12792 CSS motif domain associated with EAL E4187_19030 PF00563 EAL domain E4187_19035 PF00330 Aconitase family (aconitate hydratase) E4187_19035 PF11791 Aconitate B N-terminal domain E4187_19035 PF06434 Aconitate hydratase 2 N-terminus E4187_19040 PF01734 Patatin-like phospholipase E4187_19045 PF02743 Cache domain E4187_19045 PF00672 HAMP domain E4187_19045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4187_19065 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4187_19065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4187_19070 PF02817 e3 binding domain E4187_19070 PF00364 Biotin-requiring enzyme E4187_19070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E4187_19075 PF17831 Pyruvate dehydrogenase E1 component middle domain E4187_19075 PF00456 Transketolase, thiamine diphosphate binding domain E4187_19080 PF00392 Bacterial regulatory proteins, gntR family E4187_19080 PF07729 FCD domain E4187_19085 PF01510 N-acetylmuramoyl-L-alanine amidase E4187_19095 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain E4187_19095 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain E4187_19100 PF12323 Helix-turn-helix domain E4187_19115 PF07963 Prokaryotic N-terminal methylation motif E4187_19120 PF00437 Type II/IV secretion system protein E4187_19120 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain E4187_19125 PF00482 Type II secretion system (T2SS), protein F E4187_19130 PF06750 Bacterial Peptidase A24 N-terminal domain E4187_19130 PF01478 Type IV leader peptidase family E4187_19135 PF01121 Dephospho-CoA kinase E4187_19140 PF07072 Cell division protein E4187_19145 PF03884 DNA gyrase inhibitor YacG E4187_19150 PF00293 NUDIX domain E4187_19155 PF01043 SecA preprotein cross-linking domain E4187_19155 PF07516 SecA Wing and Scaffold domain E4187_19155 PF02810 SEC-C motif E4187_19155 PF07517 SecA DEAD-like domain E4187_19165 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase E4187_19170 PF12327 FtsZ family, C-terminal domain E4187_19170 PF00091 Tubulin/FtsZ family, GTPase domain E4187_19175 PF02491 SHS2 domain inserted in FTSA E4187_19180 PF08478 POTRA domain, FtsQ-type E4187_19180 PF03799 Cell division protein FtsQ E4187_19185 PF02875 Mur ligase family, glutamate ligase domain E4187_19185 PF08245 Mur ligase middle domain E4187_19185 PF01225 Mur ligase family, catalytic domain E4187_19190 PF03033 Glycosyltransferase family 28 N-terminal domain E4187_19190 PF04101 Glycosyltransferase family 28 C-terminal domain E4187_19195 PF01098 Cell cycle protein E4187_19200 PF02875 Mur ligase family, glutamate ligase domain E4187_19200 PF08245 Mur ligase middle domain E4187_19205 PF00953 Glycosyl transferase family 4 E4187_19205 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 E4187_19210 PF01225 Mur ligase family, catalytic domain E4187_19210 PF02875 Mur ligase family, glutamate ligase domain E4187_19210 PF08245 Mur ligase middle domain E4187_19215 PF02875 Mur ligase family, glutamate ligase domain E4187_19215 PF01225 Mur ligase family, catalytic domain E4187_19215 PF08245 Mur ligase middle domain E4187_19220 PF00905 Penicillin binding protein transpeptidase domain E4187_19220 PF03717 Penicillin-binding Protein dimerisation domain E4187_19225 PF04999 Cell division protein FtsL E4187_19230 PF01795 MraW methylase family E4187_19235 PF02381 MraZ protein, putative antitoxin-like E4187_19245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4187_19250 PF04348 LppC putative lipoprotein E4187_19255 PF02021 Uncharacterised protein family UPF0102 E4187_19260 PF13580 SIS domain E4187_19265 PF04972 BON domain E4187_19270 PF04386 Stringent starvation protein B E4187_19275 PF00043 Glutathione S-transferase, C-terminal domain E4187_19275 PF02798 Glutathione S-transferase, N-terminal domain E4187_19280 PF02167 Cytochrome C1 family E4187_19285 PF00033 Cytochrome b/b6/petB E4187_19285 PF00032 Cytochrome b(C-terminal)/b6/petD E4187_19290 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal E4187_19290 PF00355 Rieske [2Fe-2S] domain E4187_19295 PF00380 Ribosomal protein S9/S16 E4187_19300 PF00572 Ribosomal protein L13 E4187_19305 PF03969 AFG1-like ATPase E4187_19315 PF13180 PDZ domain E4187_19315 PF00595 PDZ domain E4187_19320 PF13180 PDZ domain E4187_19330 PF00381 PTS HPr component phosphorylation site E4187_19335 PF03668 P-loop ATPase protein family E4187_19340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4187_19345 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein E4187_19350 PF04552 Sigma-54, DNA binding domain E4187_19350 PF04963 Sigma-54 factor, core binding domain E4187_19350 PF00309 Sigma-54 factor, Activator interacting domain (AID) E4187_19355 PF00005 ABC transporter E4187_19355 PF12399 Branched-chain amino acid ATP-binding cassette transporter E4187_19360 PF03968 OstA-like protein E4187_19365 PF06835 Lipopolysaccharide-assembly, LptC-related E4187_19375 PF00571 CBS domain E4187_19375 PF01380 SIS domain E4187_19380 PF00005 ABC transporter E4187_19385 PF02405 Permease MlaE E4187_19390 PF02470 MlaD protein E4187_19395 PF05494 MlaC protein E4187_19405 PF01722 BolA-like protein E4187_19410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4187_19415 PF01523 Putative modulator of DNA gyrase E4187_19420 PF04751 Protein of unknown function (DUF615) E4187_19430 PF04363 Protein of unknown function (DUF496) E4187_19460 PF01381 Helix-turn-helix E4187_19460 PF07883 Cupin domain E4187_19465 PF03594 Benzoate membrane transport protein E4187_19475 PF01037 Lrp/AsnC ligand binding domain E4187_19485 PF04204 Homoserine O-succinyltransferase E4187_19495 PF02464 Competence-damaged protein E4187_19495 PF00994 Probable molybdopterin binding domain E4187_19500 PF04307 LexA-binding, inner membrane-associated putative hydrolase E4187_19515 PF07722 Peptidase C26 E4187_19525 PF13419 Haloacid dehalogenase-like hydrolase E4187_19530 PF00589 Phage integrase family E4187_19530 PF02899 Phage integrase, N-terminal SAM-like domain E4187_19540 PF01678 Diaminopimelate epimerase E4187_19545 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E4187_19545 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E4187_19555 PF01491 Frataxin-like domain E4187_19560 PF02230 Phospholipase/Carboxylesterase E4187_19565 PF12633 Adenylate cyclase NT domain E4187_19565 PF01295 Adenylate cyclase, class-I E4187_19570 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain E4187_19570 PF03900 Porphobilinogen deaminase, C-terminal domain E4187_19575 PF02602 Uroporphyrinogen-III synthase HemD E4187_19580 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase E4187_19585 PF07719 Tetratricopeptide repeat E4187_19585 PF07219 HemY protein N-terminus E4187_19590 PF03692 Putative zinc- or iron-chelating domain E4187_19595 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded E4187_19600 PF00267 Gram-negative porin E4187_19605 PF00583 Acetyltransferase (GNAT) family E4187_19610 PF00593 TonB dependent receptor E4187_19610 PF07715 TonB-dependent Receptor Plug Domain E4187_19625 PF00583 Acetyltransferase (GNAT) family E4187_19625 PF13508 Acetyltransferase (GNAT) domain E4187_19630 PF01638 HxlR-like helix-turn-helix E4187_19635 PF08803 Putative mono-oxygenase ydhR E4187_19650 PF06055 Exopolysaccharide synthesis, ExoD E4187_19655 PF17158 Membrane-associated sensor, integral membrane domain E4187_19655 PF00990 Diguanylate cyclase, GGDEF domain E4187_19660 PF13036 Peptidoglycan-synthase activator LpoB E4187_19665 PF00132 Bacterial transferase hexapeptide (six repeats) E4187_19680 PF06968 Biotin and Thiamin Synthesis associated domain E4187_19680 PF04055 Radical SAM superfamily E4187_19685 PF05690 Thiazole biosynthesis protein ThiG E4187_19695 PF00899 ThiF family E4187_19700 PF02581 Thiamine monophosphate synthase E4187_19705 PF13667 ThiC-associated domain E4187_19705 PF01964 Radical SAM ThiC family E4187_19710 PF17425 Arylsulfotransferase Ig-like domain E4187_19710 PF05935 Arylsulfotransferase (ASST) E4187_19725 PF00486 Transcriptional regulatory protein, C terminal E4187_19725 PF00072 Response regulator receiver domain E4187_19730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_19735 PF18030 RimK PreATP-grasp domain E4187_19735 PF08443 RimK-like ATP-grasp domain E4187_19740 PF02310 B12 binding domain E4187_19740 PF02607 B12 binding domain E4187_19740 PF02965 Vitamin B12 dependent methionine synthase, activation domain E4187_19740 PF00809 Pterin binding enzyme E4187_19740 PF02574 Homocysteine S-methyltransferase E4187_19745 PF00999 Sodium/hydrogen exchanger family E4187_19765 PF04228 Putative neutral zinc metallopeptidase E4187_19775 PF07690 Major Facilitator Superfamily E4187_19790 PF01523 Putative modulator of DNA gyrase E4187_19795 PF00795 Carbon-nitrogen hydrolase E4187_19800 PF13502 AsmA-like C-terminal region E4187_19800 PF13116 Protein of unknown function E4187_19805 PF00575 S1 RNA binding domain E4187_19805 PF10150 Ribonuclease E/G family E4187_19810 PF02545 Maf-like protein E4187_19815 PF04093 rod shape-determining protein MreD E4187_19820 PF04085 rod shape-determining protein MreC E4187_19855 PF08334 Type II secretion system (T2SS), protein G E4187_19855 PF07963 Prokaryotic N-terminal methylation motif E4187_19870 PF00482 Type II secretion system (T2SS), protein F E4187_19875 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain E4187_19875 PF00437 Type II/IV secretion system protein E4187_19895 PF13808 DDE_Tnp_1-associated E4187_19895 PF01609 Transposase DDE domain E4187_19930 PF00563 EAL domain E4187_19930 PF12792 CSS motif domain associated with EAL E4187_19935 PF01699 Sodium/calcium exchanger protein E4187_19940 PF01609 Transposase DDE domain E4187_19940 PF13006 Insertion element 4 transposase N-terminal E4187_19945 PF00221 Aromatic amino acid lyase E4187_19950 PF17392 Urocanase C-terminal domain E4187_19950 PF01175 Urocanase Rossmann-like domain E4187_19950 PF17391 Urocanase N-terminal domain E4187_19955 PF00491 Arginase family E4187_19960 PF01979 Amidohydrolase family E4187_19965 PF00392 Bacterial regulatory proteins, gntR family E4187_19965 PF07702 UTRA domain E4187_19970 PF00484 Carbonic anhydrase E4187_19975 PF04545 Sigma-70, region 4 E4187_19975 PF04542 Sigma-70 region 2 E4187_19975 PF00140 Sigma-70 factor, region 1.2 E4187_19980 PF18075 FtsX extracellular domain E4187_19985 PF00005 ABC transporter E4187_19990 PF02881 SRP54-type protein, helical bundle domain E4187_19990 PF00448 SRP54-type protein, GTPase domain E4187_20010 PF07226 Protein of unknown function (DUF1422) E4187_20015 PF00440 Bacterial regulatory proteins, tetR family E4187_20025 PF13091 PLD-like domain E4187_20030 PF01464 Transglycosylase SLT domain E4187_20030 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4187_20040 PF02416 mttA/Hcf106 family E4187_20045 PF03466 LysR substrate binding domain E4187_20045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_20050 PF01914 MarC family integral membrane protein E4187_20055 PF10678 Protein of unknown function (DUF2492) E4187_20060 PF00375 Sodium:dicarboxylate symporter family E4187_20070 PF03466 LysR substrate binding domain E4187_20070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_20075 PF13533 Biotin-lipoyl like E4187_20080 PF07690 Major Facilitator Superfamily E4187_20085 PF07947 YhhN family E4187_20105 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4187_20105 PF00326 Prolyl oligopeptidase family E4187_20120 PF02525 Flavodoxin-like fold E4187_20125 PF00999 Sodium/hydrogen exchanger family E4187_20125 PF02254 TrkA-N domain E4187_20145 PF13808 DDE_Tnp_1-associated E4187_20145 PF01609 Transposase DDE domain E4187_20155 PF02371 Transposase IS116/IS110/IS902 family E4187_20155 PF01548 Transposase E4187_20195 PF01196 Ribosomal protein L17 E4187_20200 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain E4187_20200 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain E4187_20200 PF01000 RNA polymerase Rpb3/RpoA insert domain E4187_20205 PF01479 S4 domain E4187_20205 PF00163 Ribosomal protein S4/S9 N-terminal domain E4187_20210 PF00411 Ribosomal protein S11 E4187_20215 PF00416 Ribosomal protein S13/S18 E4187_20220 PF00444 Ribosomal protein L36 E4187_20225 PF00344 SecY translocase E4187_20230 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A E4187_20235 PF00327 Ribosomal protein L30p/L7e E4187_20240 PF03719 Ribosomal protein S5, C-terminal domain E4187_20240 PF00333 Ribosomal protein S5, N-terminal domain E4187_20245 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast E4187_20250 PF00347 Ribosomal protein L6 E4187_20255 PF00410 Ribosomal protein S8 E4187_20260 PF00253 Ribosomal protein S14p/S29e E4187_20265 PF00281 Ribosomal protein L5 E4187_20265 PF00673 ribosomal L5P family C-terminus E4187_20270 PF00467 KOW motif E4187_20270 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 E4187_20275 PF00238 Ribosomal protein L14p/L23e E4187_20280 PF00366 Ribosomal protein S17 E4187_20285 PF00831 Ribosomal L29 protein E4187_20290 PF00252 Ribosomal protein L16p/L10e E4187_20295 PF07650 KH domain E4187_20295 PF00189 Ribosomal protein S3, C-terminal domain E4187_20300 PF00237 Ribosomal protein L22p/L17e E4187_20305 PF00203 Ribosomal protein S19 E4187_20310 PF00181 Ribosomal Proteins L2, RNA binding domain E4187_20310 PF03947 Ribosomal Proteins L2, C-terminal domain E4187_20315 PF00276 Ribosomal protein L23 E4187_20320 PF00573 Ribosomal protein L4/L1 family E4187_20325 PF00297 Ribosomal protein L3 E4187_20330 PF00338 Ribosomal protein S10p/S20e E4187_20340 PF00512 His Kinase A (phospho-acceptor) domain E4187_20340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_20340 PF00672 HAMP domain E4187_20345 PF00072 Response regulator receiver domain E4187_20345 PF00486 Transcriptional regulatory protein, C terminal E4187_20380 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) E4187_20385 PF01609 Transposase DDE domain E4187_20395 PF01609 Transposase DDE domain E4187_20415 PF13808 DDE_Tnp_1-associated E4187_20415 PF01609 Transposase DDE domain E4187_20420 PF13358 DDE superfamily endonuclease E4187_20420 PF13592 Winged helix-turn helix E4187_20435 PF01625 Peptide methionine sulfoxide reductase E4187_20440 PF01625 Peptide methionine sulfoxide reductase E4187_20445 PF01641 SelR domain E4187_20470 PF00665 Integrase core domain E4187_20475 PF01695 IstB-like ATP binding protein E4187_20485 PF08448 PAS fold E4187_20485 PF00990 Diguanylate cyclase, GGDEF domain E4187_20490 PF01625 Peptide methionine sulfoxide reductase E4187_20500 PF01641 SelR domain E4187_20505 PF00462 Glutaredoxin E4187_20510 PF01625 Peptide methionine sulfoxide reductase E4187_20515 PF02311 AraC-like ligand binding domain E4187_20515 PF12833 Helix-turn-helix domain E4187_20550 PF13438 Domain of unknown function (DUF4113) E4187_20550 PF00817 impB/mucB/samB family E4187_20550 PF11799 impB/mucB/samB family C-terminal domain E4187_20555 PF00717 Peptidase S24-like E4187_20565 PF02384 N-6 DNA Methylase E4187_20575 PF01609 Transposase DDE domain E4187_20575 PF13808 DDE_Tnp_1-associated E4187_20580 PF01420 Type I restriction modification DNA specificity domain E4187_20595 PF01272 Transcription elongation factor, GreA/GreB, C-term E4187_20595 PF03449 Transcription elongation factor, N-terminal E4187_20620 PF17674 HHH domain E4187_20620 PF16921 Tex protein YqgF-like domain E4187_20620 PF00575 S1 RNA binding domain E4187_20620 PF09371 Tex-like protein N-terminal domain E4187_20635 PF00561 alpha/beta hydrolase fold E4187_20640 PF00156 Phosphoribosyl transferase domain E4187_20645 PF01106 NifU-like domain E4187_20645 PF01521 Iron-sulphur cluster biosynthesis E4187_20650 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus E4187_20650 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus E4187_20655 PF02556 Preprotein translocase subunit SecB E4187_20660 PF00581 Rhodanese-like domain E4187_20665 PF01676 Metalloenzyme superfamily E4187_20665 PF06415 BPG-independent PGAM N-terminus (iPGM_N) E4187_20670 PF01551 Peptidase family M23 E4187_20680 PF00356 Bacterial regulatory proteins, lacI family E4187_20680 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E4187_20685 PF01081 KDPG and KHG aldolase E4187_20690 PF00920 Dehydratase family E4187_20695 PF01202 Shikimate kinase E4187_20700 PF02447 GntP family permease E4187_20705 PF13091 PLD-like domain E4187_20715 PF17191 RecG wedge domain E4187_20715 PF00271 Helicase conserved C-terminal domain E4187_20715 PF00270 DEAD/DEAH box helicase E4187_20725 PF00583 Acetyltransferase (GNAT) family E4187_20725 PF09500 Putative thioesterase (yiiD_Cterm) E4187_20735 PF02580 D-Tyr-tRNA(Tyr) deacylase E4187_20740 PF03631 Virulence factor BrkB E4187_20750 PF00120 Glutamine synthetase, catalytic domain E4187_20750 PF03951 Glutamine synthetase, beta-Grasp domain E4187_20760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_20760 PF00989 PAS fold E4187_20760 PF00512 His Kinase A (phospho-acceptor) domain E4187_20765 PF02954 Bacterial regulatory protein, Fis family E4187_20765 PF00158 Sigma-54 interaction domain E4187_20765 PF00072 Response regulator receiver domain E4187_20770 PF00962 Adenosine/AMP deaminase E4187_20775 PF04055 Radical SAM superfamily E4187_20775 PF06969 HemN C-terminal domain E4187_20780 PF10675 Protein of unknown function (DUF2489) E4187_20785 PF04220 Der GTPase activator (YihI) E4187_20790 PF00034 Cytochrome c E4187_20795 PF01926 50S ribosome-binding GTPase E4187_20800 PF08501 Shikimate dehydrogenase substrate binding domain E4187_20800 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E4187_20800 PF01488 Shikimate / quinate 5-dehydrogenase E4187_20805 PF01218 Coproporphyrinogen III oxidase E4187_20810 PF01300 Telomere recombination E4187_20815 PF01396 Topoisomerase DNA binding C4 zinc finger E4187_20820 PF04361 Protein of unknown function (DUF494) E4187_20825 PF02481 DNA recombination-mediator protein A E4187_20825 PF17782 DprA winged helix domain E4187_20835 PF01327 Polypeptide deformylase E4187_20840 PF00551 Formyl transferase E4187_20840 PF02911 Formyl transferase, C-terminal domain E4187_20845 PF01029 NusB family E4187_20845 PF01189 16S rRNA methyltransferase RsmB/F E4187_20850 PF02080 TrkA-C domain E4187_20850 PF02254 TrkA-N domain E4187_20855 PF02386 Cation transport protein E4187_20860 PF02646 RmuC family E4187_20875 PF02082 Transcriptional regulator E4187_20880 PF00294 pfkB family carbohydrate kinase E4187_20885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_20885 PF03466 LysR substrate binding domain E4187_20890 PF02540 NAD synthase E4187_20890 PF00117 Glutamine amidotransferase class-I E4187_20890 PF00958 GMP synthase C terminal domain E4187_20895 PF00171 Aldehyde dehydrogenase family E4187_20900 PF00202 Aminotransferase class-III E4187_20905 PF01381 Helix-turn-helix E4187_20905 PF07883 Cupin domain E4187_20910 PF00171 Aldehyde dehydrogenase family E4187_20920 PF00892 EamA-like transporter family E4187_20925 PF12833 Helix-turn-helix domain E4187_20930 PF01810 LysE type translocator E4187_20935 PF04143 Sulphur transport E4187_20940 PF06206 CpeT/CpcT family (DUF1001) E4187_20960 PF14001 YdfZ protein E4187_20970 PF00109 Beta-ketoacyl synthase, N-terminal domain E4187_20970 PF02801 Beta-ketoacyl synthase, C-terminal domain E4187_20990 PF01609 Transposase DDE domain E4187_20990 PF13808 DDE_Tnp_1-associated E4187_21010 PF13361 UvrD-like helicase C-terminal domain E4187_21010 PF00580 UvrD/REP helicase N-terminal domain E4187_21045 PF13006 Insertion element 4 transposase N-terminal E4187_21045 PF01609 Transposase DDE domain E4187_21050 PF04389 Peptidase family M28 E4187_21050 PF04151 Bacterial pre-peptidase C-terminal domain E4187_21055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4187_21055 PF03466 LysR substrate binding domain E4187_21060 PF08240 Alcohol dehydrogenase GroES-like domain E4187_21060 PF00107 Zinc-binding dehydrogenase E4187_21065 PF00756 Putative esterase E4187_21080 PF03781 Sulfatase-modifying factor enzyme 1 E4187_21080 PF12867 DinB superfamily E4187_21085 PF13593 SBF-like CPA transporter family (DUF4137) E4187_21090 PF13520 Amino acid permease E4187_21095 PF01588 Putative tRNA binding domain E4187_21100 PF13520 Amino acid permease E4187_21105 PF04074 YhcH/YjgK/YiaL E4187_21110 PF02837 Glycosyl hydrolases family 2, sugar binding domain E4187_21110 PF02836 Glycosyl hydrolases family 2, TIM barrel domain E4187_21110 PF00703 Glycosyl hydrolases family 2 E4187_21110 PF16353 Domain of unknown function(DUF4981) E4187_21110 PF02929 Beta galactosidase small chain E4187_21115 PF00356 Bacterial regulatory proteins, lacI family E4187_21155 PF00132 Bacterial transferase hexapeptide (six repeats) E4187_21160 PF01612 3'-5' exonuclease E4187_21160 PF00476 DNA polymerase family A E4187_21160 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E4187_21160 PF01367 5'-3' exonuclease, C-terminal SAM fold E4187_21175 PF06005 Cell division protein ZapB E4187_21185 PF00132 Bacterial transferase hexapeptide (six repeats) E4187_21185 PF06426 Serine acetyltransferase, N-terminal E4187_21190 PF01545 Cation efflux family E4187_21190 PF16916 Dimerisation domain of Zinc Transporter E4187_21195 PF00072 Response regulator receiver domain E4187_21195 PF00486 Transcriptional regulatory protein, C terminal E4187_21200 PF16527 Two-component sensor protein CpxA, periplasmic domain E4187_21200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_21200 PF00512 His Kinase A (phospho-acceptor) domain E4187_21200 PF00672 HAMP domain E4187_21205 PF00588 SpoU rRNA Methylase family E4187_21210 PF01554 MatE E4187_21225 PF01726 LexA DNA binding domain E4187_21225 PF00717 Peptidase S24-like E4187_21230 PF01553 Acyltransferase E4187_21235 PF01040 UbiA prenyltransferase family E4187_21240 PF04345 Chorismate lyase E4187_21245 PF03748 Flagellar basal body-associated protein FliL E4187_21260 PF08240 Alcohol dehydrogenase GroES-like domain E4187_21260 PF00107 Zinc-binding dehydrogenase E4187_21280 PF04932 O-Antigen ligase E4187_21285 PF13439 Glycosyltransferase Family 4 E4187_21290 PF01370 NAD dependent epimerase/dehydratase family E4187_21295 PF00440 Bacterial regulatory proteins, tetR family E4187_21295 PF08360 QacR-like protein, C-terminal region E4187_21300 PF00155 Aminotransferase class I and II E4187_21305 PF08240 Alcohol dehydrogenase GroES-like domain E4187_21305 PF00107 Zinc-binding dehydrogenase E4187_21315 PF03707 Bacterial signalling protein N terminal repeat E4187_21315 PF00990 Diguanylate cyclase, GGDEF domain E4187_21315 PF00563 EAL domain E4187_21320 PF13361 UvrD-like helicase C-terminal domain E4187_21320 PF00580 UvrD/REP helicase N-terminal domain E4187_21325 PF00266 Aminotransferase class-V E4187_21330 PF02657 Fe-S metabolism associated domain E4187_21335 PF00899 ThiF family E4187_21370 PF12724 Flavodoxin domain E4187_21375 PF02386 Cation transport protein E4187_21380 PF01205 Uncharacterized protein family UPF0029 E4187_21380 PF09186 Domain of unknown function (DUF1949) E4187_21385 PF00557 Metallopeptidase family M24 E4187_21390 PF00501 AMP-binding enzyme E4187_21390 PF13193 AMP-binding enzyme C-terminal domain E4187_21395 PF00378 Enoyl-CoA hydratase/isomerase E4187_21395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E4187_21395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E4187_21400 PF00108 Thiolase, N-terminal domain E4187_21400 PF02803 Thiolase, C-terminal domain E4187_21405 PF00072 Response regulator receiver domain E4187_21405 PF00486 Transcriptional regulatory protein, C terminal E4187_21410 PF00672 HAMP domain E4187_21410 PF00512 His Kinase A (phospho-acceptor) domain E4187_21410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_21415 PF01547 Bacterial extracellular solute-binding protein E4187_21425 PF01206 Sulfurtransferase TusA E4187_21430 PF01042 Endoribonuclease L-PSP E4187_21435 PF00691 OmpA family E4187_21435 PF13488 Glycine zipper E4187_21460 PF03352 Methyladenine glycosylase E4187_21465 PF02091 Glycyl-tRNA synthetase alpha subunit E4187_21470 PF02092 Glycyl-tRNA synthetase beta subunit E4187_21470 PF05746 DALR anticodon binding domain E4187_21500 PF03222 Tryptophan/tyrosine permease family E4187_21505 PF03222 Tryptophan/tyrosine permease family E4187_21510 PF01212 Beta-eliminating lyase E4187_21520 PF12801 4Fe-4S binding domain E4187_21530 PF18113 Rubredoxin binding C-terminal domain E4187_21530 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4187_21535 PF00258 Flavodoxin E4187_21535 PF00753 Metallo-beta-lactamase superfamily E4187_21535 PF00301 Rubredoxin E4187_21540 PF00158 Sigma-54 interaction domain E4187_21540 PF01590 GAF domain E4187_21545 PF00356 Bacterial regulatory proteins, lacI family E4187_21550 PF13458 Periplasmic binding protein E4187_21555 PF02653 Branched-chain amino acid transport system / permease component E4187_21560 PF11862 Domain of unknown function (DUF3382) E4187_21560 PF02653 Branched-chain amino acid transport system / permease component E4187_21565 PF00005 ABC transporter E4187_21565 PF12399 Branched-chain amino acid ATP-binding cassette transporter E4187_21570 PF00005 ABC transporter E4187_21575 PF12833 Helix-turn-helix domain E4187_21585 PF00581 Rhodanese-like domain E4187_21590 PF01694 Rhomboid family E4187_21590 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease E4187_21595 PF12262 Bacterial virulence factor lipase N-terminal E4187_21600 PF04380 Membrane fusogenic activity E4187_21605 PF00175 Oxidoreductase NAD-binding domain E4187_21610 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase E4187_21620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4187_21620 PF07497 Rho termination factor, RNA-binding domain E4187_21620 PF07498 Rho termination factor, N-terminal domain E4187_21625 PF00085 Thioredoxin E4187_21630 PF00270 DEAD/DEAH box helicase E4187_21630 PF00271 Helicase conserved C-terminal domain E4187_21635 PF02541 Ppx/GppA phosphatase family E4187_21650 PF04445 Putative SAM-dependent methyltransferase E4187_21655 PF03707 Bacterial signalling protein N terminal repeat E4187_21655 PF00563 EAL domain E4187_21655 PF00990 Diguanylate cyclase, GGDEF domain E4187_21660 PF01432 Peptidase family M3 E4187_21665 PF00490 Delta-aminolevulinic acid dehydratase E4187_21670 PF01026 TatD related DNase E4187_21675 PF00902 Sec-independent protein translocase protein (TatC) E4187_21680 PF02416 mttA/Hcf106 family E4187_21685 PF02416 mttA/Hcf106 family E4187_21690 PF03109 ABC1 family E4187_21695 PF02036 SCP-2 sterol transfer family E4187_21700 PF01209 ubiE/COQ5 methyltransferase family E4187_21705 PF02537 CrcB-like protein, Camphor Resistance (CrcB) E4187_21710 PF07969 Amidohydrolase family E4187_21715 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin E4187_21750 PF03544 Gram-negative bacterial TonB protein C-terminal E4187_21755 PF02472 Biopolymer transport protein ExbD/TolR E4187_21760 PF01618 MotA/TolQ/ExbB proton channel family E4187_21765 PF01618 MotA/TolQ/ExbB proton channel family E4187_21775 PF03472 Autoinducer binding domain E4187_21775 PF00196 Bacterial regulatory proteins, luxR family E4187_21785 PF09369 Domain of unknown function (DUF1998) E4187_21785 PF00270 DEAD/DEAH box helicase E4187_21785 PF00271 Helicase conserved C-terminal domain E4187_21800 PF05598 Transposase domain (DUF772) E4187_21800 PF01609 Transposase DDE domain E4187_21810 PF06527 TniQ E4187_21810 PF15978 Tn7-like transposition protein D E4187_21815 PF11426 Tn7 transposition regulator TnsC E4187_21815 PF13401 AAA domain E4187_21820 PF00665 Integrase core domain E4187_21825 PF08722 TnsA endonuclease N terminal E4187_21825 PF08721 TnsA endonuclease C terminal E4187_21830 PF01380 SIS domain E4187_21835 PF00455 DeoR C terminal sensor domain E4187_21835 PF08220 DeoR-like helix-turn-helix domain E4187_21840 PF00486 Transcriptional regulatory protein, C terminal E4187_21840 PF00072 Response regulator receiver domain E4187_21845 PF00512 His Kinase A (phospho-acceptor) domain E4187_21845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4187_21845 PF00672 HAMP domain E4187_21855 PF13006 Insertion element 4 transposase N-terminal E4187_21855 PF01609 Transposase DDE domain E4187_21860 PF06123 Inner membrane protein CreD E4187_21865 PF14602 Hexapeptide repeat of succinyl-transferase E4187_21865 PF12804 MobA-like NTP transferase domain E4187_21865 PF00132 Bacterial transferase hexapeptide (six repeats) E4187_21870 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain E4187_21870 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain E4187_21875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4187_21875 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4187_21880 PF00231 ATP synthase E4187_21885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4187_21885 PF00306 ATP synthase alpha/beta chain, C terminal domain E4187_21885 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4187_21890 PF00213 ATP synthase delta (OSCP) subunit E4187_21895 PF00430 ATP synthase B/B' CF(0) E4187_21900 PF00137 ATP synthase subunit C E4187_21905 PF00119 ATP synthase A chain E4187_21915 PF02195 ParB-like nuclease domain E4187_21915 PF17762 HTH domain found in ParB protein E4187_21920 PF13614 AAA domain E4187_21925 PF02527 rRNA small subunit methyltransferase G E4187_21930 PF01134 Glucose inhibited division protein A E4187_21930 PF13932 GidA associated domain E4187_21935 PF00258 Flavodoxin E4187_21940 PF00593 TonB dependent receptor E4187_21940 PF07715 TonB-dependent Receptor Plug Domain E4187_21945 PF00005 ABC transporter E4187_21950 PF00005 ABC transporter E4187_21955 PF01497 Periplasmic binding protein E4187_21960 PF01032 FecCD transport family E4187_21965 PF13006 Insertion element 4 transposase N-terminal E4187_21965 PF01609 Transposase DDE domain E4187_21970 PF12631 MnmE helical domain E4187_21970 PF10396 GTP-binding protein TrmE N-terminus E4187_21970 PF01926 50S ribosome-binding GTPase E4187_21975 PF02096 60Kd inner membrane protein E4187_21975 PF14849 YidC periplasmic domain E4187_21980 PF01809 Putative membrane protein insertion efficiency factor E4187_21985 PF00825 Ribonuclease P E4187_21990 PF00468 Ribosomal protein L34 E4187_22000 PF00528 Binding-protein-dependent transport system inner membrane component E4187_22005 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4187_22085 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system E4187_22130 PF06122 Conjugative relaxosome accessory transposon protein E4187_22155 PF00145 C-5 cytosine-specific DNA methylase E4187_22210 PF13361 UvrD-like helicase C-terminal domain E4187_22210 PF00580 UvrD/REP helicase N-terminal domain E4187_22275 PF04381 Putative exonuclease, RdgC E4187_22290 PF00816 H-NS histone family E4187_22310 PF13614 AAA domain E4187_22345 PF02517 CPBP intramembrane metalloprotease E4187_22365 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) E4187_22390 PF13307 Helicase C-terminal domain E4187_22420 PF06986 Type-1V conjugative transfer system mating pair stabilisation E4187_22425 PF06834 TraU protein E4187_22435 PF10502 Signal peptidase, peptidase S26 E4187_22485 PF05547 Immune inhibitor A peptidase M6 E4187_22485 PF00801 PKD domain E4187_22510 PF04307 LexA-binding, inner membrane-associated putative hydrolase E4187_22735 PF05816 Toxic anion resistance protein (TelA) E4187_22740 PF05816 Toxic anion resistance protein (TelA) E4187_22800 PF10411 Disulfide bond isomerase protein N-terminus E4187_22800 PF13098 Thioredoxin-like domain E4187_22835 PF06630 Enterobacterial exodeoxyribonuclease VIII E4187_22835 PF12684 PDDEXK-like domain of unknown function (DUF3799) E4187_22850 PF00436 Single-strand binding protein family E4187_22885 PF12464 Maltose acetyltransferase E4187_22885 PF14602 Hexapeptide repeat of succinyl-transferase E4187_22885 PF00132 Bacterial transferase hexapeptide (six repeats)