locus-tag class description E4184_00005 PF00308 Bacterial dnaA protein E4184_00005 PF08299 Bacterial dnaA protein helix-turn-helix E4184_00005 PF11638 DnaA N-terminal domain E4184_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain E4184_00010 PF02767 DNA polymerase III beta subunit, central domain E4184_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain E4184_00015 PF02463 RecF/RecN/SMC N terminal domain E4184_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_00020 PF01751 Toprim domain E4184_00020 PF18053 DNA gyrase B subunit insert domain E4184_00020 PF00986 DNA gyrase B subunit, carboxyl terminus E4184_00020 PF00204 DNA gyrase B E4184_00025 PF01965 DJ-1/PfpI family E4184_00025 PF12833 Helix-turn-helix domain E4184_00030 PF12706 Beta-lactamase superfamily domain E4184_00035 PF00011 Hsp20/alpha crystallin family E4184_00040 PF00011 Hsp20/alpha crystallin family E4184_00045 PF00155 Aminotransferase class I and II E4184_00060 PF07690 Major Facilitator Superfamily E4184_00065 PF00486 Transcriptional regulatory protein, C terminal E4184_00065 PF00072 Response regulator receiver domain E4184_00070 PF13492 GAF domain E4184_00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_00070 PF00512 His Kinase A (phospho-acceptor) domain E4184_00070 PF02702 Osmosensitive K+ channel His kinase sensor domain E4184_00070 PF13493 Domain of unknown function (DUF4118) E4184_00075 PF02669 K+-transporting ATPase, c chain E4184_00085 PF03814 Potassium-transporting ATPase A subunit E4184_00100 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) E4184_00125 PF01695 IstB-like ATP binding protein E4184_00130 PF00665 Integrase core domain E4184_00155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4184_00155 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4184_00160 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4184_00160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_00160 PF00512 His Kinase A (phospho-acceptor) domain E4184_00165 PF00873 AcrB/AcrD/AcrF family E4184_00170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4184_00175 PF00440 Bacterial regulatory proteins, tetR family E4184_00215 PF12146 Serine aminopeptidase, S33 E4184_00220 PF00132 Bacterial transferase hexapeptide (six repeats) E4184_00225 PF12105 SpoU, rRNA methylase, C-terminal E4184_00225 PF00588 SpoU rRNA Methylase family E4184_00235 PF02824 TGS domain E4184_00235 PF04607 Region found in RelA / SpoT proteins E4184_00235 PF13291 ACT domain E4184_00240 PF01192 RNA polymerase Rpb6 E4184_00245 PF00625 Guanylate kinase E4184_00255 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E4184_00270 PF00892 EamA-like transporter family E4184_00290 PF03466 LysR substrate binding domain E4184_00290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_00295 PF00579 tRNA synthetases class I (W and Y) E4184_00300 PF00582 Universal stress protein family E4184_00305 PF07055 Enoyl reductase FAD binding domain E4184_00305 PF12241 Trans-2-enoyl-CoA reductase catalytic region E4184_00305 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase E4184_00310 PF00990 Diguanylate cyclase, GGDEF domain E4184_00310 PF05230 MASE2 domain E4184_00315 PF00210 Ferritin-like domain E4184_00325 PF07690 Major Facilitator Superfamily E4184_00330 PF01810 LysE type translocator E4184_00335 PF07694 5TMR of 5TMR-LYT E4184_00335 PF06580 Histidine kinase E4184_00335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_00340 PF04397 LytTr DNA-binding domain E4184_00340 PF00072 Response regulator receiver domain E4184_00345 PF07690 Major Facilitator Superfamily E4184_00350 PF02222 ATP-grasp domain E4184_00350 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain E4184_00355 PF00731 AIR carboxylase E4184_00360 PF00593 TonB dependent receptor E4184_00360 PF07715 TonB-dependent Receptor Plug Domain E4184_00365 PF01177 Asp/Glu/Hydantoin racemase E4184_00400 PF00583 Acetyltransferase (GNAT) family E4184_00400 PF13380 CoA binding domain E4184_00400 PF13607 Succinyl-CoA ligase like flavodoxin domain E4184_00410 PF03466 LysR substrate binding domain E4184_00410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_00415 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain E4184_00415 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain E4184_00420 PF00342 Phosphoglucose isomerase E4184_00425 PF00924 Mechanosensitive ion channel E4184_00425 PF05552 Conserved TM helix E4184_00440 PF00440 Bacterial regulatory proteins, tetR family E4184_00450 PF00692 dUTPase E4184_00470 PF01609 Transposase DDE domain E4184_00495 PF00816 H-NS histone family E4184_00525 PF01609 Transposase DDE domain E4184_00530 PF02321 Outer membrane efflux protein E4184_00555 PF01695 IstB-like ATP binding protein E4184_00560 PF00665 Integrase core domain E4184_00570 PF13358 DDE superfamily endonuclease E4184_00570 PF13592 Winged helix-turn helix E4184_00600 PF00486 Transcriptional regulatory protein, C terminal E4184_00600 PF00072 Response regulator receiver domain E4184_00605 PF00672 HAMP domain E4184_00605 PF00512 His Kinase A (phospho-acceptor) domain E4184_00605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_00610 PF01609 Transposase DDE domain E4184_00610 PF13808 DDE_Tnp_1-associated E4184_00625 PF00665 Integrase core domain E4184_00630 PF01695 IstB-like ATP binding protein E4184_00655 PF05275 Copper resistance protein B precursor (CopB) E4184_00660 PF00394 Multicopper oxidase E4184_00660 PF07731 Multicopper oxidase E4184_00660 PF07732 Multicopper oxidase E4184_00670 PF13358 DDE superfamily endonuclease E4184_00670 PF13592 Winged helix-turn helix E4184_00675 PF01609 Transposase DDE domain E4184_00675 PF05598 Transposase domain (DUF772) E4184_00685 PF02441 Flavoprotein E4184_00685 PF04127 DNA / pantothenate metabolism flavoprotein E4184_00690 PF04002 RadC-like JAB domain E4184_00695 PF00830 Ribosomal L28 family E4184_00700 PF00471 Ribosomal protein L33 E4184_00710 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain E4184_00710 PF06827 Zinc finger found in FPG and IleRS E4184_00710 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain E4184_00715 PF04393 Protein of unknown function (DUF535) E4184_00720 PF01467 Cytidylyltransferase-like E4184_00725 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E4184_00730 PF00535 Glycosyl transferase family 2 E4184_00735 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E4184_00740 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) E4184_00750 PF07804 HipA-like C-terminal domain E4184_00770 PF01609 Transposase DDE domain E4184_00770 PF13808 DDE_Tnp_1-associated E4184_00775 PF18395 Cas3 C-terminal domain E4184_00775 PF18019 HD domain E4184_00780 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) E4184_00790 PF09344 CT1975-like protein E4184_00800 PF08798 CRISPR associated protein E4184_00805 PF01867 CRISPR associated protein Cas1 E4184_00810 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) E4184_00820 PF13358 DDE superfamily endonuclease E4184_00820 PF13592 Winged helix-turn helix E4184_00855 PF08340 Domain of unknown function (DUF1732) E4184_00855 PF03755 YicC-like family, N-terminal region E4184_00860 PF01138 3' exoribonuclease family, domain 1 E4184_00860 PF03725 3' exoribonuclease family, domain 2 E4184_00865 PF00156 Phosphoribosyl transferase domain E4184_00870 PF00403 Heavy-metal-associated domain E4184_00875 PF09278 MerR, DNA binding E4184_00875 PF00376 MerR family regulatory protein E4184_00880 PF01590 GAF domain E4184_00880 PF00990 Diguanylate cyclase, GGDEF domain E4184_00880 PF00360 Phytochrome region E4184_00880 PF00563 EAL domain E4184_00885 PF06288 Protein of unknown function (DUF1040) E4184_00890 PF12801 4Fe-4S binding domain E4184_00890 PF13746 4Fe-4S dicluster domain E4184_00890 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase E4184_00895 PF01636 Phosphotransferase enzyme family E4184_00900 PF01323 DSBA-like thioredoxin domain E4184_00905 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain E4184_00905 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family E4184_00910 PF00857 Isochorismatase family E4184_00920 PF04463 Protein of unknown function (DUF523) E4184_00925 PF01553 Acyltransferase E4184_00930 PF01553 Acyltransferase E4184_00935 PF13335 Magnesium chelatase, subunit ChlI C-terminal E4184_00935 PF01078 Magnesium chelatase, subunit ChlI E4184_00945 PF00205 Thiamine pyrophosphate enzyme, central domain E4184_00945 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E4184_00945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4184_00955 PF01063 Amino-transferase class IV E4184_00960 PF00920 Dehydratase family E4184_00965 PF00291 Pyridoxal-phosphate dependent enzyme E4184_00965 PF00585 C-terminal regulatory domain of Threonine dehydratase E4184_00970 PF00691 OmpA family E4184_00970 PF01389 OmpA-like transmembrane domain E4184_00975 PF00270 DEAD/DEAH box helicase E4184_00975 PF18319 PriA DNA helicase Cys-rich region (CRR) domain E4184_00975 PF18074 Primosomal protein N C-terminal domain E4184_00975 PF00271 Helicase conserved C-terminal domain E4184_00975 PF17764 3′ DNA-binding domain (3′BD) E4184_00980 PF01197 Ribosomal protein L31 E4184_00985 PF13460 NAD(P)H-binding E4184_00985 PF11066 Protein of unknown function (DUF2867) E4184_00990 PF03949 Malic enzyme, NAD binding domain E4184_00990 PF00390 Malic enzyme, N-terminal domain E4184_01000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_01000 PF00512 His Kinase A (phospho-acceptor) domain E4184_01000 PF00672 HAMP domain E4184_01005 PF00072 Response regulator receiver domain E4184_01005 PF00486 Transcriptional regulatory protein, C terminal E4184_01010 PF05958 tRNA (Uracil-5-)-methyltransferase E4184_01025 PF02903 Alpha amylase, N-terminal ig-like domain E4184_01025 PF00128 Alpha amylase, catalytic domain E4184_01040 PF00012 Hsp70 protein E4184_01045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4184_01045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4184_01050 PF05981 CreA protein E4184_01065 PF01258 Prokaryotic dksA/traR C4-type zinc finger E4184_01070 PF00120 Glutamine synthetase, catalytic domain E4184_01075 PF00202 Aminotransferase class-III E4184_01080 PF13416 Bacterial extracellular solute-binding protein E4184_01085 PF13416 Bacterial extracellular solute-binding protein E4184_01090 PF00005 ABC transporter E4184_01090 PF08402 TOBE domain E4184_01095 PF00528 Binding-protein-dependent transport system inner membrane component E4184_01100 PF00528 Binding-protein-dependent transport system inner membrane component E4184_01105 PF03473 MOSC domain E4184_01105 PF03475 3-alpha domain E4184_01120 PF03061 Thioesterase superfamily E4184_01125 PF00270 DEAD/DEAH box helicase E4184_01125 PF00271 Helicase conserved C-terminal domain E4184_01125 PF00570 HRDC domain E4184_01125 PF16124 RecQ zinc-binding E4184_01125 PF09382 RQC domain E4184_01130 PF00034 Cytochrome c E4184_01135 PF02696 Uncharacterized ACR, YdiU/UPF0061 family E4184_01145 PF02592 Putative vitamin uptake transporter E4184_01150 PF03737 Aldolase/RraA E4184_01155 PF03448 MgtE intracellular N domain E4184_01155 PF01769 Divalent cation transporter E4184_01155 PF00571 CBS domain E4184_01160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4184_01160 PF14824 Sirohaem biosynthesis protein central E4184_01160 PF10414 Sirohaem synthase dimerisation region E4184_01165 PF01226 Formate/nitrite transporter E4184_01170 PF13806 Rieske-like [2Fe-2S] domain E4184_01175 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4184_01175 PF04324 BFD-like [2Fe-2S] binding domain E4184_01175 PF18267 Rubredoxin NAD+ reductase C-terminal domain E4184_01175 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E4184_01175 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E4184_01190 PF00005 ABC transporter E4184_01195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4184_01205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_01205 PF03466 LysR substrate binding domain E4184_01210 PF07690 Major Facilitator Superfamily E4184_01215 PF00004 ATPase family associated with various cellular activities (AAA) E4184_01215 PF07724 AAA domain (Cdc48 subfamily) E4184_01215 PF10431 C-terminal, D2-small domain, of ClpB protein E4184_01220 PF00227 Proteasome subunit E4184_01230 PF05746 DALR anticodon binding domain E4184_01230 PF00750 tRNA synthetases class I (R) E4184_01230 PF03485 Arginyl tRNA synthetase N terminal domain E4184_01240 PF04542 Sigma-70 region 2 E4184_01240 PF04545 Sigma-70, region 4 E4184_01245 PF12973 ChrR Cupin-like domain E4184_01250 PF02673 Bacitracin resistance protein BacA E4184_01255 PF00248 Aldo/keto reductase family E4184_01260 PF01263 Aldose 1-epimerase E4184_01265 PF08544 GHMP kinases C terminal E4184_01265 PF00288 GHMP kinases N terminal domain E4184_01265 PF10509 Galactokinase galactose-binding signature E4184_01270 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain E4184_01270 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain E4184_01275 PF16363 GDP-mannose 4,6 dehydratase E4184_01280 PF00356 Bacterial regulatory proteins, lacI family E4184_01285 PF02836 Glycosyl hydrolases family 2, TIM barrel domain E4184_01285 PF02837 Glycosyl hydrolases family 2, sugar binding domain E4184_01285 PF16353 Domain of unknown function(DUF4981) E4184_01285 PF00703 Glycosyl hydrolases family 2 E4184_01285 PF02929 Beta galactosidase small chain E4184_01290 PF13407 Periplasmic binding protein domain E4184_01295 PF00005 ABC transporter E4184_01300 PF02653 Branched-chain amino acid transport system / permease component E4184_01305 PF00672 HAMP domain E4184_01305 PF02743 Cache domain E4184_01305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_01320 PF00696 Amino acid kinase family E4184_01325 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4184_01325 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4184_01330 PF03606 C4-dicarboxylate anaerobic carrier E4184_01335 PF02863 Arginine repressor, C-terminal domain E4184_01335 PF01316 Arginine repressor, DNA binding domain E4184_01340 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain E4184_01340 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain E4184_01345 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4184_01345 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4184_01360 PF00672 HAMP domain E4184_01360 PF02743 Cache domain E4184_01360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_01370 PF08212 Lipocalin-like domain E4184_01375 PF12833 Helix-turn-helix domain E4184_01375 PF06719 AraC-type transcriptional regulator N-terminus E4184_01380 PF00465 Iron-containing alcohol dehydrogenase E4184_01385 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E4184_01385 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E4184_01385 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch E4184_01390 PF02233 NAD(P) transhydrogenase beta subunit E4184_01395 PF03313 Serine dehydratase alpha chain E4184_01400 PF00375 Sodium:dicarboxylate symporter family E4184_01405 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4184_01405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4184_01410 PF13525 Outer membrane lipoprotein E4184_01415 PF01479 S4 domain E4184_01415 PF00849 RNA pseudouridylate synthase E4184_01425 PF07724 AAA domain (Cdc48 subfamily) E4184_01425 PF02861 Clp amino terminal domain, pathogenicity island component E4184_01425 PF17871 AAA lid domain E4184_01425 PF00004 ATPase family associated with various cellular activities (AAA) E4184_01425 PF10431 C-terminal, D2-small domain, of ClpB protein E4184_01435 PF00034 Cytochrome c E4184_01440 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E4184_01445 PF03590 Aspartate-ammonia ligase E4184_01450 PF01037 Lrp/AsnC ligand binding domain E4184_01460 PF10063 Uncharacterized integral membrane protein (DUF2301) E4184_01465 PF00571 CBS domain E4184_01465 PF00478 IMP dehydrogenase / GMP reductase domain E4184_01485 PF00512 His Kinase A (phospho-acceptor) domain E4184_01485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_01495 PF00072 Response regulator receiver domain E4184_01495 PF00158 Sigma-54 interaction domain E4184_01500 PF06496 Protein of unknown function (DUF1097) E4184_01510 PF00174 Oxidoreductase molybdopterin binding domain E4184_01515 PF01794 Ferric reductase like transmembrane component E4184_01530 PF00486 Transcriptional regulatory protein, C terminal E4184_01530 PF00072 Response regulator receiver domain E4184_01535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_01535 PF08918 PhoQ Sensor E4184_01545 PF00384 Molybdopterin oxidoreductase E4184_01545 PF18364 Molybdopterin oxidoreductase N-terminal domain E4184_01545 PF01568 Molydopterin dinucleotide binding domain E4184_01550 PF03264 NapC/NirT cytochrome c family, N-terminal region E4184_01555 PF01131 DNA topoisomerase E4184_01555 PF01751 Toprim domain E4184_01560 PF02386 Cation transport protein E4184_01565 PF02080 TrkA-C domain E4184_01565 PF02254 TrkA-N domain E4184_01570 PF01565 FAD binding domain E4184_01570 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain E4184_01575 PF02237 Biotin protein ligase C terminal domain E4184_01575 PF03099 Biotin/lipoate A/B protein ligase family E4184_01575 PF08279 HTH domain E4184_01580 PF00485 Phosphoribulokinase / Uridine kinase family E4184_01595 PF00009 Elongation factor Tu GTP binding domain E4184_01595 PF03144 Elongation factor Tu domain 2 E4184_01595 PF03143 Elongation factor Tu C-terminal domain E4184_01605 PF00584 SecE/Sec61-gamma subunits of protein translocation complex E4184_01610 PF02357 Transcription termination factor nusG E4184_01610 PF00467 KOW motif E4184_01615 PF03946 Ribosomal protein L11, N-terminal domain E4184_01615 PF00298 Ribosomal protein L11, RNA binding domain E4184_01620 PF00687 Ribosomal protein L1p/L10e family E4184_01625 PF00466 Ribosomal protein L10 E4184_01630 PF16320 Ribosomal protein L7/L12 dimerisation domain E4184_01630 PF00542 Ribosomal protein L7/L12 C-terminal domain E4184_01635 PF04560 RNA polymerase Rpb2, domain 7 E4184_01635 PF00562 RNA polymerase Rpb2, domain 6 E4184_01635 PF10385 RNA polymerase beta subunit external 1 domain E4184_01635 PF04563 RNA polymerase beta subunit E4184_01635 PF04561 RNA polymerase Rpb2, domain 2 E4184_01635 PF04565 RNA polymerase Rpb2, domain 3 E4184_01640 PF04983 RNA polymerase Rpb1, domain 3 E4184_01640 PF04998 RNA polymerase Rpb1, domain 5 E4184_01640 PF00623 RNA polymerase Rpb1, domain 2 E4184_01640 PF04997 RNA polymerase Rpb1, domain 1 E4184_01640 PF05000 RNA polymerase Rpb1, domain 4 E4184_01645 PF13309 HTH domain E4184_01645 PF08348 YheO-like PAS domain E4184_01650 PF01042 Endoribonuclease L-PSP E4184_01655 PF02635 DsrE/DsrF-like family E4184_01660 PF02635 DsrE/DsrF-like family E4184_01665 PF04077 DsrH like protein E4184_01670 PF00164 Ribosomal protein S12/S23 E4184_01675 PF00177 Ribosomal protein S7p/S5e E4184_01680 PF03764 Elongation factor G, domain IV E4184_01680 PF14492 Elongation Factor G, domain II E4184_01680 PF00679 Elongation factor G C-terminus E4184_01680 PF00009 Elongation factor Tu GTP binding domain E4184_01680 PF03144 Elongation factor Tu domain 2 E4184_01685 PF00009 Elongation factor Tu GTP binding domain E4184_01685 PF03144 Elongation factor Tu domain 2 E4184_01685 PF03143 Elongation factor Tu C-terminal domain E4184_01730 PF02321 Outer membrane efflux protein E4184_01740 PF00873 AcrB/AcrD/AcrF family E4184_01745 PF00529 HlyD membrane-fusion protein of T1SS E4184_01745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4184_01765 PF02600 Disulfide bond formation protein DsbB E4184_01775 PF00403 Heavy-metal-associated domain E4184_01780 PF13411 MerR HTH family regulatory protein E4184_01785 PF01609 Transposase DDE domain E4184_01785 PF05598 Transposase domain (DUF772) E4184_01790 PF03079 ARD/ARD' family E4184_01795 PF00860 Permease family E4184_01800 PF02733 Dak1 domain E4184_01805 PF02734 DAK2 domain E4184_01810 PF00381 PTS HPr component phosphorylation site E4184_01810 PF03610 PTS system fructose IIA component E4184_01810 PF05524 PEP-utilising enzyme, N-terminal E4184_01810 PF00391 PEP-utilising enzyme, mobile domain E4184_01815 PF00989 PAS fold E4184_01815 PF02954 Bacterial regulatory protein, Fis family E4184_01815 PF00158 Sigma-54 interaction domain E4184_01820 PF03466 LysR substrate binding domain E4184_01820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_01825 PF04371 Porphyromonas-type peptidyl-arginine deiminase E4184_01830 PF13416 Bacterial extracellular solute-binding protein E4184_01835 PF04371 Porphyromonas-type peptidyl-arginine deiminase E4184_01840 PF00106 short chain dehydrogenase E4184_01845 PF01594 AI-2E family transporter E4184_01850 PF01569 PAP2 superfamily E4184_01870 PF06628 Catalase-related immune-responsive E4184_01870 PF00199 Catalase E4184_01875 PF00583 Acetyltransferase (GNAT) family E4184_01880 PF06719 AraC-type transcriptional regulator N-terminus E4184_01880 PF12833 Helix-turn-helix domain E4184_01900 PF07694 5TMR of 5TMR-LYT E4184_01900 PF00990 Diguanylate cyclase, GGDEF domain E4184_01910 PF08402 TOBE domain E4184_01910 PF00005 ABC transporter E4184_01920 PF00528 Binding-protein-dependent transport system inner membrane component E4184_01935 PF07702 UTRA domain E4184_01935 PF00392 Bacterial regulatory proteins, gntR family E4184_01945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_01945 PF03466 LysR substrate binding domain E4184_01955 PF02678 Pirin E4184_01955 PF17954 Quercetinase C-terminal cupin domain E4184_01960 PF07681 DoxX E4184_01965 PF17946 RecC C-terminal domain E4184_01970 PF12705 PD-(D/E)XK nuclease superfamily E4184_01970 PF00580 UvrD/REP helicase N-terminal domain E4184_01970 PF13361 UvrD-like helicase C-terminal domain E4184_01975 PF13538 UvrD-like helicase C-terminal domain E4184_01985 PF01609 Transposase DDE domain E4184_01990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4184_02000 PF00909 Ammonium Transporter Family E4184_02005 PF00543 Nitrogen regulatory protein P-II E4184_02010 PF08448 PAS fold E4184_02010 PF00990 Diguanylate cyclase, GGDEF domain E4184_02025 PF00196 Bacterial regulatory proteins, luxR family E4184_02030 PF00436 Single-strand binding protein family E4184_02050 PF00313 'Cold-shock' DNA-binding domain E4184_02055 PF07715 TonB-dependent Receptor Plug Domain E4184_02055 PF00593 TonB dependent receptor E4184_02060 PF00672 HAMP domain E4184_02060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_02060 PF00512 His Kinase A (phospho-acceptor) domain E4184_02065 PF00486 Transcriptional regulatory protein, C terminal E4184_02065 PF00072 Response regulator receiver domain E4184_02075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_02075 PF00672 HAMP domain E4184_02085 PF07219 HemY protein N-terminus E4184_02085 PF07719 Tetratricopeptide repeat E4184_02090 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase E4184_02095 PF02602 Uroporphyrinogen-III synthase HemD E4184_02100 PF03900 Porphobilinogen deaminase, C-terminal domain E4184_02100 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain E4184_02105 PF01295 Adenylate cyclase, class-I E4184_02105 PF12633 Adenylate cyclase NT domain E4184_02110 PF02230 Phospholipase/Carboxylesterase E4184_02115 PF01491 Frataxin-like domain E4184_02125 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E4184_02125 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E4184_02130 PF01678 Diaminopimelate epimerase E4184_02140 PF00589 Phage integrase family E4184_02140 PF02899 Phage integrase, N-terminal SAM-like domain E4184_02145 PF13419 Haloacid dehalogenase-like hydrolase E4184_02165 PF07722 Peptidase C26 E4184_02180 PF04307 LexA-binding, inner membrane-associated putative hydrolase E4184_02185 PF00994 Probable molybdopterin binding domain E4184_02185 PF02464 Competence-damaged protein E4184_02195 PF04204 Homoserine O-succinyltransferase E4184_02205 PF01037 Lrp/AsnC ligand binding domain E4184_02210 PF00884 Sulfatase E4184_02220 PF00128 Alpha amylase, catalytic domain E4184_02220 PF16657 Maltogenic Amylase, C-terminal domain E4184_02220 PF02903 Alpha amylase, N-terminal ig-like domain E4184_02225 PF02308 MgtC family E4184_02245 PF00106 short chain dehydrogenase E4184_02260 PF00465 Iron-containing alcohol dehydrogenase E4184_02270 PF01053 Cys/Met metabolism PLP-dependent enzyme E4184_02280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4184_02280 PF12793 Sugar transport-related sRNA regulator N-term E4184_02295 PF03280 Proteobacterial lipase chaperone protein E4184_02300 PF00561 alpha/beta hydrolase fold E4184_02310 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E4184_02310 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E4184_02315 PF02698 DUF218 domain E4184_02320 PF00501 AMP-binding enzyme E4184_02325 PF13378 Enolase C-terminal domain-like E4184_02330 PF00378 Enoyl-CoA hydratase/isomerase E4184_02335 PF12697 Alpha/beta hydrolase family E4184_02340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E4184_02340 PF16582 Middle domain of thiamine pyrophosphate E4184_02340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4184_02345 PF00425 chorismate binding enzyme E4184_02350 PF01040 UbiA prenyltransferase family E4184_02355 PF02554 Carbon starvation protein CstA E4184_02355 PF13722 5TM C-terminal transporter carbon starvation CstA E4184_02360 PF04328 Selenoprotein, putative E4184_02365 PF07683 Cobalamin synthesis protein cobW C-terminal domain E4184_02365 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4184_02390 PF00270 DEAD/DEAH box helicase E4184_02390 PF03880 DbpA RNA binding domain E4184_02390 PF00271 Helicase conserved C-terminal domain E4184_02400 PF01773 Na+ dependent nucleoside transporter N-terminus E4184_02400 PF07662 Na+ dependent nucleoside transporter C-terminus E4184_02400 PF07670 Nucleoside recognition E4184_02405 PF11999 Protein of unknown function (DUF3494) E4184_02405 PF02368 Bacterial Ig-like domain (group 2) E4184_02410 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 E4184_02415 PF01544 CorA-like Mg2+ transporter protein E4184_02435 PF05068 Mannitol repressor E4184_02440 PF08125 Mannitol dehydrogenase C-terminal domain E4184_02440 PF01232 Mannitol dehydrogenase Rossmann domain E4184_02445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4184_02445 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E4184_02445 PF02378 Phosphotransferase system, EIIC E4184_02450 PF17876 Cold shock domain E4184_02450 PF08206 Ribonuclease B OB domain E4184_02450 PF00773 RNB domain E4184_02455 PF03466 LysR substrate binding domain E4184_02455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_02460 PF00765 Autoinducer synthase E4184_02465 PF00196 Bacterial regulatory proteins, luxR family E4184_02465 PF03472 Autoinducer binding domain E4184_02470 PF01810 LysE type translocator E4184_02475 PF00149 Calcineurin-like phosphoesterase E4184_02475 PF02872 5'-nucleotidase, C-terminal domain E4184_02480 PF03279 Bacterial lipid A biosynthesis acyltransferase E4184_02485 PF01467 Cytidylyltransferase-like E4184_02485 PF00294 pfkB family carbohydrate kinase E4184_02490 PF02321 Outer membrane efflux protein E4184_02495 PF00293 NUDIX domain E4184_02500 PF06853 Protein of unknown function (DUF1249) E4184_02505 PF00149 Calcineurin-like phosphoesterase E4184_02510 PF05728 Uncharacterised protein family (UPF0227) E4184_02515 PF00293 NUDIX domain E4184_02525 PF07869 Protein of unknown function (DUF1656) E4184_02530 PF00529 HlyD membrane-fusion protein of T1SS E4184_02530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4184_02535 PF04632 Fusaric acid resistance protein family E4184_02540 PF00986 DNA gyrase B subunit, carboxyl terminus E4184_02540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_02540 PF00204 DNA gyrase B E4184_02540 PF01751 Toprim domain E4184_02545 PF00521 DNA gyrase/topoisomerase IV, subunit A E4184_02545 PF03989 DNA gyrase C-terminal domain, beta-propeller E4184_02565 PF00583 Acetyltransferase (GNAT) family E4184_02600 PF01556 DnaJ C terminal domain E4184_02600 PF00684 DnaJ central domain E4184_02600 PF00226 DnaJ domain E4184_02610 PF00578 AhpC/TSA family E4184_02630 PF01553 Acyltransferase E4184_02635 PF04012 PspA/IM30 family E4184_02650 PF01541 GIY-YIG catalytic domain E4184_02655 PF00892 EamA-like transporter family E4184_02660 PF03167 Uracil DNA glycosylase superfamily E4184_02670 PF03466 LysR substrate binding domain E4184_02670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_02675 PF00950 ABC 3 transport family E4184_02680 PF00005 ABC transporter E4184_02685 PF01297 Zinc-uptake complex component A periplasmic E4184_02705 PF01551 Peptidase family M23 E4184_02705 PF08525 Opacity-associated protein A N-terminal motif E4184_02705 PF01476 LysM domain E4184_02710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4184_02715 PF04222 Protein of unknown function (DUF416) E4184_02730 PF02028 BCCT, betaine/carnitine/choline family transporter E4184_02735 PF00488 MutS domain V E4184_02735 PF05190 MutS family domain IV E4184_02735 PF05192 MutS domain III E4184_02735 PF05188 MutS domain II E4184_02735 PF01624 MutS domain I E4184_02745 PF02464 Competence-damaged protein E4184_02750 PF00154 recA bacterial DNA recombination protein E4184_02755 PF02631 RecX family E4184_02760 PF02272 DHHA1 domain E4184_02760 PF01411 tRNA synthetases class II (A) E4184_02760 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4184_02765 PF00696 Amino acid kinase family E4184_02765 PF01842 ACT domain E4184_02765 PF13840 ACT domain E4184_02770 PF02599 Global regulator protein family E4184_02805 PF00768 D-alanyl-D-alanine carboxypeptidase E4184_02810 PF09335 SNARE associated Golgi protein E4184_02815 PF01595 Cyclin M transmembrane N-terminal domain E4184_02815 PF00571 CBS domain E4184_02815 PF03471 Transporter associated domain E4184_02820 PF08264 Anticodon-binding domain of tRNA E4184_02820 PF00133 tRNA synthetases class I (I, L, M and V) E4184_02820 PF10458 Valyl tRNA synthetase tRNA binding arm E4184_02825 PF04364 DNA polymerase III chi subunit, HolC E4184_02830 PF00883 Cytosol aminopeptidase family, catalytic domain E4184_02830 PF02789 Cytosol aminopeptidase family, N-terminal domain E4184_02835 PF03739 Lipopolysaccharide export system permease LptF/LptG E4184_02840 PF03739 Lipopolysaccharide export system permease LptF/LptG E4184_02855 PF00589 Phage integrase family E4184_02870 PF00665 Integrase core domain E4184_02875 PF01695 IstB-like ATP binding protein E4184_02895 PF01926 50S ribosome-binding GTPase E4184_02895 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E4184_02935 PF02796 Helix-turn-helix domain of resolvase E4184_02935 PF00239 Resolvase, N terminal domain E4184_02945 PF00271 Helicase conserved C-terminal domain E4184_02945 PF04851 Type III restriction enzyme, res subunit E4184_02945 PF08463 EcoEI R protein C-terminal E4184_02945 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) E4184_02950 PF01420 Type I restriction modification DNA specificity domain E4184_02960 PF12161 HsdM N-terminal domain E4184_02960 PF02384 N-6 DNA Methylase E4184_02975 PF00909 Ammonium Transporter Family E4184_02980 PF01938 TRAM domain E4184_02980 PF05958 tRNA (Uracil-5-)-methyltransferase E4184_03000 PF01026 TatD related DNase E4184_03005 PF01773 Na+ dependent nucleoside transporter N-terminus E4184_03005 PF07670 Nucleoside recognition E4184_03005 PF07662 Na+ dependent nucleoside transporter C-terminus E4184_03015 PF01791 DeoC/LacD family aldolase E4184_03020 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain E4184_03020 PF02885 Glycosyl transferase family, helical bundle domain E4184_03020 PF00591 Glycosyl transferase family, a/b domain E4184_03025 PF01676 Metalloenzyme superfamily E4184_03030 PF01048 Phosphorylase superfamily E4184_03040 PF11737 Protein of unknown function (DUF3300) E4184_03050 PF18429 Domain of unknown function (DUF5609) E4184_03065 PF18073 Rubredoxin metal binding domain E4184_03070 PF07238 PilZ domain E4184_03075 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ E4184_03080 PF00216 Bacterial DNA-binding protein E4184_03095 PF01207 Dihydrouridine synthase (Dus) E4184_03100 PF01475 Ferric uptake regulator family E4184_03115 PF05525 Branched-chain amino acid transport protein E4184_03120 PF05175 Methyltransferase small domain E4184_03125 PF00270 DEAD/DEAH box helicase E4184_03125 PF00271 Helicase conserved C-terminal domain E4184_03130 PF03883 Peroxide stress protein YaaA E4184_03140 PF00437 Type II/IV secretion system protein E4184_03145 PF01168 Alanine racemase, N-terminal domain E4184_03150 PF14748 Pyrroline-5-carboxylate reductase dimerisation E4184_03150 PF03807 NADP oxidoreductase coenzyme F420-dependent E4184_03155 PF02325 YGGT family E4184_03160 PF02594 Uncharacterised ACR, YggU family COG1872 E4184_03180 PF06062 Uncharacterised protein family (UPF0231) E4184_03190 PF17853 GGDEF-like domain E4184_03190 PF13556 PucR C-terminal helix-turn-helix domain E4184_03190 PF05651 Putative sugar diacid recognition E4184_03195 PF02447 GntP family permease E4184_03200 PF02595 Glycerate kinase family E4184_03210 PF00255 Glutathione peroxidase E4184_03215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_03215 PF03466 LysR substrate binding domain E4184_03220 PF07662 Na+ dependent nucleoside transporter C-terminus E4184_03220 PF01773 Na+ dependent nucleoside transporter N-terminus E4184_03220 PF07670 Nucleoside recognition E4184_03225 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E4184_03225 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E4184_03230 PF00472 RF-1 domain E4184_03235 PF00543 Nitrogen regulatory protein P-II E4184_03255 PF08402 TOBE domain E4184_03255 PF00005 ABC transporter E4184_03260 PF04261 Dyp-type peroxidase family E4184_03265 PF02863 Arginine repressor, C-terminal domain E4184_03265 PF01316 Arginine repressor, DNA binding domain E4184_03270 PF00005 ABC transporter E4184_03275 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4184_03280 PF00528 Binding-protein-dependent transport system inner membrane component E4184_03285 PF00528 Binding-protein-dependent transport system inner membrane component E4184_03290 PF00056 lactate/malate dehydrogenase, NAD binding domain E4184_03290 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain E4184_03295 PF08238 Sel1 repeat E4184_03300 PF00175 Oxidoreductase NAD-binding domain E4184_03300 PF00042 Globin E4184_03300 PF00970 Oxidoreductase FAD-binding domain E4184_03305 PF02082 Transcriptional regulator E4184_03310 PF01595 Cyclin M transmembrane N-terminal domain E4184_03310 PF03471 Transporter associated domain E4184_03310 PF00571 CBS domain E4184_03315 PF01578 Cytochrome C assembly protein E4184_03320 PF02881 SRP54-type protein, helical bundle domain E4184_03320 PF02978 Signal peptide binding domain E4184_03320 PF00448 SRP54-type protein, GTPase domain E4184_03325 PF00886 Ribosomal protein S16 E4184_03330 PF05239 PRC-barrel domain E4184_03330 PF01782 RimM N-terminal domain E4184_03335 PF01746 tRNA (Guanine-1)-methyltransferase E4184_03340 PF01245 Ribosomal protein L19 E4184_03350 PF02976 DNA mismatch repair enzyme MutH E4184_03355 PF00293 NUDIX domain E4184_03360 PF01590 GAF domain E4184_03360 PF05524 PEP-utilising enzyme, N-terminal E4184_03360 PF00391 PEP-utilising enzyme, mobile domain E4184_03360 PF02896 PEP-utilising enzyme, TIM barrel domain E4184_03365 PF01790 Prolipoprotein diacylglyceryl transferase E4184_03370 PF00303 Thymidylate synthase E4184_03375 PF06965 Na+/H+ antiporter 1 E4184_03385 PF03466 LysR substrate binding domain E4184_03385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_03390 PF01022 Bacterial regulatory protein, arsR family E4184_03395 PF01649 Ribosomal protein S20 E4184_03400 PF03023 Lipid II flippase MurJ E4184_03405 PF06574 FAD synthetase E4184_03405 PF01687 Riboflavin kinase E4184_03410 PF08264 Anticodon-binding domain of tRNA E4184_03410 PF00133 tRNA synthetases class I (I, L, M and V) E4184_03410 PF06827 Zinc finger found in FPG and IleRS E4184_03415 PF01252 Signal peptidase (SPase) II E4184_03420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4184_03425 PF02401 LytB protein E4184_03430 PF14245 Type IV pilin PilA E4184_03430 PF07963 Prokaryotic N-terminal methylation motif E4184_03455 PF13808 DDE_Tnp_1-associated E4184_03455 PF01609 Transposase DDE domain E4184_03475 PF00795 Carbon-nitrogen hydrolase E4184_03475 PF02540 NAD synthase E4184_03480 PF00543 Nitrogen regulatory protein P-II E4184_03490 PF02664 S-Ribosylhomocysteinase (LuxS) E4184_03495 PF00990 Diguanylate cyclase, GGDEF domain E4184_03500 PF17876 Cold shock domain E4184_03500 PF08461 Ribonuclease R winged-helix domain E4184_03500 PF00773 RNB domain E4184_03500 PF00575 S1 RNA binding domain E4184_03500 PF08206 Ribonuclease B OB domain E4184_03505 PF00588 SpoU rRNA Methylase family E4184_03505 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4184_03515 PF13673 Acetyltransferase (GNAT) domain E4184_03530 PF01566 Natural resistance-associated macrophage protein E4184_03535 PF01250 Ribosomal protein S6 E4184_03540 PF01084 Ribosomal protein S18 E4184_03545 PF03948 Ribosomal protein L9, C-terminal domain E4184_03545 PF01281 Ribosomal protein L9, N-terminal domain E4184_03550 PF00970 Oxidoreductase FAD-binding domain E4184_03550 PF00175 Oxidoreductase NAD-binding domain E4184_03585 PF09335 SNARE associated Golgi protein E4184_03590 PF05193 Peptidase M16 inactive domain E4184_03590 PF00675 Insulinase (Peptidase family M16) E4184_03595 PF04262 Glutamate-cysteine ligase E4184_03600 PF03605 Anaerobic c4-dicarboxylate membrane transporter E4184_03605 PF10415 Fumarase C C-terminus E4184_03605 PF00206 Lyase E4184_03610 PF04186 FxsA cytoplasmic membrane protein E4184_03615 PF01554 MatE E4184_03620 PF00166 Chaperonin 10 Kd subunit E4184_03625 PF00118 TCP-1/cpn60 chaperonin family E4184_03635 PF00563 EAL domain E4184_03635 PF03707 Bacterial signalling protein N terminal repeat E4184_03635 PF00990 Diguanylate cyclase, GGDEF domain E4184_03645 PF00849 RNA pseudouridylate synthase E4184_03650 PF18337 RapA N-terminal Tudor like domain E4184_03650 PF18339 RapA N-terminal Tudor like domain 1 E4184_03650 PF00176 SNF2 family N-terminal domain E4184_03650 PF00271 Helicase conserved C-terminal domain E4184_03650 PF12137 RNA polymerase recycling family C-terminal E4184_03690 PF00528 Binding-protein-dependent transport system inner membrane component E4184_03695 PF00528 Binding-protein-dependent transport system inner membrane component E4184_03700 PF12857 TOBE-like domain E4184_03700 PF00005 ABC transporter E4184_03705 PF03466 LysR substrate binding domain E4184_03705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_03710 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading E4184_03710 PF18416 N-acetylglucosamine binding protein domain 2 E4184_03715 PF00672 HAMP domain E4184_03715 PF17200 Single Cache domain 2 E4184_03715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_03740 PF11230 Protein of unknown function (DUF3029) E4184_03745 PF04055 Radical SAM superfamily E4184_03755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_03755 PF03466 LysR substrate binding domain E4184_03760 PF00155 Aminotransferase class I and II E4184_03765 PF11658 Cellulose biosynthesis protein BcsG E4184_03775 PF06564 Cellulose biosynthesis protein BcsQ E4184_03780 PF07238 PilZ domain E4184_03780 PF00535 Glycosyl transferase family 2 E4184_03785 PF03170 Bacterial cellulose synthase subunit E4184_03790 PF01270 Glycosyl hydrolases family 8 E4184_03795 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) E4184_03800 PF02583 Metal-sensitive transcriptional repressor E4184_03815 PF11852 Domain of unknown function (DUF3372) E4184_03815 PF03714 Bacterial pullanase-associated domain E4184_03815 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E4184_03815 PF17967 Pullulanase N2 domain E4184_03815 PF18494 Pullulanase Ins domain E4184_03820 PF00403 Heavy-metal-associated domain E4184_03825 PF08534 Redoxin E4184_03830 PF00270 DEAD/DEAH box helicase E4184_03830 PF00271 Helicase conserved C-terminal domain E4184_03840 PF08447 PAS fold E4184_03840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_03850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4184_03860 PF00132 Bacterial transferase hexapeptide (six repeats) E4184_03865 PF10952 Protein of unknown function (DUF2753) E4184_03870 PF00378 Enoyl-CoA hydratase/isomerase E4184_03885 PF00106 short chain dehydrogenase E4184_03890 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4184_03890 PF03129 Anticodon binding domain E4184_03890 PF04073 Aminoacyl-tRNA editing domain E4184_03895 PF00672 HAMP domain E4184_03895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_03900 PF01330 RuvA N terminal domain E4184_03900 PF07499 RuvA, C-terminal domain E4184_03905 PF17864 RuvB AAA lid domain E4184_03905 PF05496 Holliday junction DNA helicase RuvB P-loop domain E4184_03905 PF05491 RuvB C-terminal winged helix domain E4184_03910 PF01654 Cytochrome bd terminal oxidase subunit I E4184_03915 PF02322 Cytochrome bd terminal oxidase subunit II E4184_03920 PF08173 Membrane bound YbgT-like protein E4184_03925 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) E4184_03930 PF03061 Thioesterase superfamily E4184_03935 PF01618 MotA/TolQ/ExbB proton channel family E4184_03940 PF02472 Biopolymer transport protein ExbD/TolR E4184_03950 PF04052 TolB amino-terminal domain E4184_03950 PF07676 WD40-like Beta Propeller Repeat E4184_03955 PF00691 OmpA family E4184_03960 PF16331 TolA binding protein trimerisation E4184_03960 PF13174 Tetratricopeptide repeat E4184_04035 PF02445 Quinolinate synthetase A protein E4184_04040 PF01263 Aldose 1-epimerase E4184_04045 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E4184_04045 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E4184_04050 PF02446 4-alpha-glucanotransferase E4184_04055 PF00128 Alpha amylase, catalytic domain E4184_04055 PF02806 Alpha amylase, C-terminal all-beta domain E4184_04055 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E4184_04060 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E4184_04060 PF00128 Alpha amylase, catalytic domain E4184_04065 PF01641 SelR domain E4184_04075 PF00293 NUDIX domain E4184_04080 PF16884 N-terminal domain of oxidoreductase E4184_04080 PF00107 Zinc-binding dehydrogenase E4184_04085 PF01047 MarR family E4184_04100 PF01037 Lrp/AsnC ligand binding domain E4184_04110 PF07690 Major Facilitator Superfamily E4184_04130 PF00209 Sodium:neurotransmitter symporter family E4184_04135 PF00209 Sodium:neurotransmitter symporter family E4184_04145 PF00155 Aminotransferase class I and II E4184_04145 PF00392 Bacterial regulatory proteins, gntR family E4184_04155 PF01810 LysE type translocator E4184_04160 PF01177 Asp/Glu/Hydantoin racemase E4184_04170 PF00501 AMP-binding enzyme E4184_04180 PF00583 Acetyltransferase (GNAT) family E4184_04190 PF07728 AAA domain (dynein-related subfamily) E4184_04190 PF12592 Protein of unknown function (DUF3763) E4184_04190 PF17868 AAA lid domain E4184_04195 PF05762 VWA domain containing CoxE-like protein E4184_04200 PF13188 PAS domain E4184_04200 PF03707 Bacterial signalling protein N terminal repeat E4184_04200 PF00563 EAL domain E4184_04200 PF00990 Diguanylate cyclase, GGDEF domain E4184_04205 PF00990 Diguanylate cyclase, GGDEF domain E4184_04205 PF00072 Response regulator receiver domain E4184_04210 PF16658 Class II release factor RF3, C-terminal domain E4184_04210 PF00009 Elongation factor Tu GTP binding domain E4184_04210 PF03144 Elongation factor Tu domain 2 E4184_04215 PF00583 Acetyltransferase (GNAT) family E4184_04220 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4184_04225 PF13977 BetI-type transcriptional repressor, C-terminal E4184_04225 PF00440 Bacterial regulatory proteins, tetR family E4184_04235 PF03466 LysR substrate binding domain E4184_04235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_04240 PF04371 Porphyromonas-type peptidyl-arginine deiminase E4184_04245 PF01425 Amidase E4184_04285 PF00271 Helicase conserved C-terminal domain E4184_04285 PF00270 DEAD/DEAH box helicase E4184_04290 PF00990 Diguanylate cyclase, GGDEF domain E4184_04295 PF05643 Putative bacterial lipoprotein (DUF799) E4184_04305 PF03783 Curli production assembly/transport component CsgG E4184_04325 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase E4184_04335 PF03150 Di-haem cytochrome c peroxidase E4184_04345 PF00445 Ribonuclease T2 family E4184_04355 PF03060 Nitronate monooxygenase E4184_04410 PF01810 LysE type translocator E4184_04415 PF02954 Bacterial regulatory protein, Fis family E4184_04420 PF01207 Dihydrouridine synthase (Dus) E4184_04430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4184_04460 PF00072 Response regulator receiver domain E4184_04465 PF00854 POT family E4184_04470 PF00483 Nucleotidyl transferase E4184_04480 PF00459 Inositol monophosphatase family E4184_04485 PF03795 YCII-related domain E4184_04490 PF04279 Intracellular septation protein A E4184_04500 PF03006 Haemolysin-III related E4184_04505 PF06826 Predicted Permease Membrane Region E4184_04505 PF02080 TrkA-C domain E4184_04515 PF07690 Major Facilitator Superfamily E4184_04520 PF03466 LysR substrate binding domain E4184_04520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_04530 PF13302 Acetyltransferase (GNAT) domain E4184_04535 PF13302 Acetyltransferase (GNAT) domain E4184_04545 PF04074 YhcH/YjgK/YiaL E4184_04550 PF00871 Acetokinase family E4184_04555 PF00924 Mechanosensitive ion channel E4184_04560 PF03734 L,D-transpeptidase catalytic domain E4184_04560 PF17969 L,D-transpeptidase C-terminal domain E4184_04565 PF00474 Sodium:solute symporter family E4184_04575 PF02525 Flavodoxin-like fold E4184_04580 PF13411 MerR HTH family regulatory protein E4184_04605 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ E4184_04615 PF12848 ABC transporter E4184_04615 PF00005 ABC transporter E4184_04620 PF00478 IMP dehydrogenase / GMP reductase domain E4184_04620 PF00571 CBS domain E4184_04625 PF00267 Gram-negative porin E4184_04630 PF00072 Response regulator receiver domain E4184_04630 PF01584 CheW-like domain E4184_04635 PF13472 GDSL-like Lipase/Acylhydrolase family E4184_04640 PF00005 ABC transporter E4184_04650 PF01370 NAD dependent epimerase/dehydratase family E4184_04650 PF08338 Domain of unknown function (DUF1731) E4184_04655 PF00563 EAL domain E4184_04655 PF12792 CSS motif domain associated with EAL E4184_04660 PF00155 Aminotransferase class I and II E4184_04665 PF04389 Peptidase family M28 E4184_04665 PF01483 Proprotein convertase P-domain E4184_04670 PF02390 Putative methyltransferase E4184_04675 PF04320 Protein with unknown function (DUF469) E4184_04680 PF04960 Glutaminase E4184_04685 PF00581 Rhodanese-like domain E4184_04690 PF06004 Bacterial protein of unknown function (DUF903) E4184_04695 PF01810 LysE type translocator E4184_04700 PF12833 Helix-turn-helix domain E4184_04705 PF00005 ABC transporter E4184_04705 PF00664 ABC transporter transmembrane region E4184_04710 PF00561 alpha/beta hydrolase fold E4184_04725 PF01609 Transposase DDE domain E4184_04740 PF00589 Phage integrase family E4184_04760 PF13426 PAS domain E4184_04760 PF08448 PAS fold E4184_04760 PF00563 EAL domain E4184_04760 PF08447 PAS fold E4184_04760 PF00990 Diguanylate cyclase, GGDEF domain E4184_04760 PF05231 MASE1 E4184_04765 PF00589 Phage integrase family E4184_04765 PF02899 Phage integrase, N-terminal SAM-like domain E4184_04770 PF13808 DDE_Tnp_1-associated E4184_04770 PF01609 Transposase DDE domain E4184_04800 PF01048 Phosphorylase superfamily E4184_04825 PF06877 Regulator of ribonuclease activity B E4184_04830 PF00563 EAL domain E4184_04830 PF00990 Diguanylate cyclase, GGDEF domain E4184_04830 PF03707 Bacterial signalling protein N terminal repeat E4184_04840 PF13006 Insertion element 4 transposase N-terminal E4184_04840 PF01609 Transposase DDE domain E4184_04855 PF09905 DNA-binding protein VF530 E4184_04860 PF02666 Phosphatidylserine decarboxylase E4184_04865 PF03193 RsgA GTPase E4184_04870 PF00929 Exonuclease E4184_04910 PF00313 'Cold-shock' DNA-binding domain E4184_04925 PF00672 HAMP domain E4184_04925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_04930 PF00749 tRNA synthetases class I (E and Q), catalytic domain E4184_04935 PF00749 tRNA synthetases class I (E and Q), catalytic domain E4184_04970 PF06483 Chitinase C E4184_04970 PF00704 Glycosyl hydrolases family 18 E4184_04985 PF02472 Biopolymer transport protein ExbD/TolR E4184_04990 PF01618 MotA/TolQ/ExbB proton channel family E4184_04995 PF01618 MotA/TolQ/ExbB proton channel family E4184_05005 PF07715 TonB-dependent Receptor Plug Domain E4184_05005 PF00593 TonB dependent receptor E4184_05010 PF00528 Binding-protein-dependent transport system inner membrane component E4184_05015 PF00528 Binding-protein-dependent transport system inner membrane component E4184_05015 PF12911 N-terminal TM domain of oligopeptide transport permease C E4184_05020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4184_05025 PF00005 ABC transporter E4184_05025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4184_05030 PF00005 ABC transporter E4184_05030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4184_05040 PF01546 Peptidase family M20/M25/M40 E4184_05040 PF07687 Peptidase dimerisation domain E4184_05055 PF00156 Phosphoribosyl transferase domain E4184_05065 PF07417 Sigma factor-binding transcriptional regulator Crl E4184_05070 PF00696 Amino acid kinase family E4184_05070 PF01472 PUA domain E4184_05075 PF00171 Aldehyde dehydrogenase family E4184_05085 PF00582 Universal stress protein family E4184_05105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4184_05105 PF10414 Sirohaem synthase dimerisation region E4184_05105 PF14824 Sirohaem biosynthesis protein central E4184_05115 PF00005 ABC transporter E4184_05120 PF00528 Binding-protein-dependent transport system inner membrane component E4184_05125 PF00005 ABC transporter E4184_05130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E4184_05130 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4184_05130 PF18267 Rubredoxin NAD+ reductase C-terminal domain E4184_05130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E4184_05130 PF13806 Rieske-like [2Fe-2S] domain E4184_05130 PF04324 BFD-like [2Fe-2S] binding domain E4184_05135 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E4184_05135 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E4184_05135 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4184_05135 PF13806 Rieske-like [2Fe-2S] domain E4184_05135 PF18267 Rubredoxin NAD+ reductase C-terminal domain E4184_05135 PF04324 BFD-like [2Fe-2S] binding domain E4184_05140 PF00294 pfkB family carbohydrate kinase E4184_05145 PF04227 Indigoidine synthase A like protein E4184_05150 PF13592 Winged helix-turn helix E4184_05150 PF13358 DDE superfamily endonuclease E4184_05155 PF00194 Eukaryotic-type carbonic anhydrase E4184_05165 PF13808 DDE_Tnp_1-associated E4184_05165 PF01609 Transposase DDE domain E4184_05170 PF03150 Di-haem cytochrome c peroxidase E4184_05170 PF00034 Cytochrome c E4184_05185 PF00994 Probable molybdopterin binding domain E4184_05195 PF06738 Putative threonine/serine exporter E4184_05200 PF12821 Threonine/Serine exporter, ThrE E4184_05205 PF00186 Dihydrofolate reductase E4184_05210 PF00005 ABC transporter E4184_05210 PF00571 CBS domain E4184_05215 PF00528 Binding-protein-dependent transport system inner membrane component E4184_05220 PF04069 Substrate binding domain of ABC-type glycine betaine transport system E4184_05225 PF01507 Phosphoadenosine phosphosulfate reductase family E4184_05230 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E4184_05230 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E4184_05235 PF00667 FAD binding domain E4184_05235 PF00258 Flavodoxin E4184_05235 PF00175 Oxidoreductase NAD-binding domain E4184_05240 PF02567 Phenazine biosynthesis-like protein E4184_05245 PF00152 tRNA synthetases class II (D, K and N) E4184_05245 PF01336 OB-fold nucleic acid binding domain E4184_05255 PF02743 Cache domain E4184_05255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_05255 PF00672 HAMP domain E4184_05260 PF03616 Sodium/glutamate symporter E4184_05265 PF17763 Glutaminase/Asparaginase C-terminal domain E4184_05265 PF00710 Asparaginase, N-terminal E4184_05270 PF07023 Protein of unknown function (DUF1315) E4184_05275 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E4184_05275 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E4184_05295 PF01343 Peptidase family S49 E4184_05300 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4184_05300 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4184_05305 PF00881 Nitroreductase family E4184_05310 PF12464 Maltose acetyltransferase E4184_05310 PF14602 Hexapeptide repeat of succinyl-transferase E4184_05320 PF00107 Zinc-binding dehydrogenase E4184_05320 PF08240 Alcohol dehydrogenase GroES-like domain E4184_05325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_05325 PF03466 LysR substrate binding domain E4184_05330 PF02378 Phosphotransferase system, EIIC E4184_05330 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E4184_05330 PF00367 phosphotransferase system, EIIB E4184_05335 PF00474 Sodium:solute symporter family E4184_05340 PF06196 Protein of unknown function (DUF997) E4184_05345 PF00289 Biotin carboxylase, N-terminal domain E4184_05345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E4184_05345 PF02785 Biotin carboxylase C-terminal domain E4184_05350 PF00364 Biotin-requiring enzyme E4184_05355 PF01220 Dehydroquinase class II E4184_05360 PF13193 AMP-binding enzyme C-terminal domain E4184_05360 PF00501 AMP-binding enzyme E4184_05360 PF16177 Acetyl-coenzyme A synthetase N-terminus E4184_05365 PF00563 EAL domain E4184_05365 PF00990 Diguanylate cyclase, GGDEF domain E4184_05365 PF03707 Bacterial signalling protein N terminal repeat E4184_05375 PF02613 Nitrate reductase delta subunit E4184_05380 PF18364 Molybdopterin oxidoreductase N-terminal domain E4184_05380 PF00384 Molybdopterin oxidoreductase E4184_05380 PF01568 Molydopterin dinucleotide binding domain E4184_05385 PF03264 NapC/NirT cytochrome c family, N-terminal region E4184_05390 PF00072 Response regulator receiver domain E4184_05390 PF00486 Transcriptional regulatory protein, C terminal E4184_05400 PF01627 Hpt domain E4184_05400 PF00512 His Kinase A (phospho-acceptor) domain E4184_05400 PF00072 Response regulator receiver domain E4184_05400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_05400 PF00672 HAMP domain E4184_05410 PF00464 Serine hydroxymethyltransferase E4184_05415 PF03477 ATP cone domain E4184_05420 PF01872 RibD C-terminal domain E4184_05420 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E4184_05425 PF00677 Lumazine binding domain E4184_05430 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase E4184_05430 PF00925 GTP cyclohydrolase II E4184_05435 PF00885 6,7-dimethyl-8-ribityllumazine synthase E4184_05440 PF01029 NusB family E4184_05445 PF02769 AIR synthase related protein, C-terminal domain E4184_05445 PF00586 AIR synthase related protein, N-terminal domain E4184_05450 PF04608 Phosphatidylglycerophosphatase A E4184_05455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4184_05455 PF00005 ABC transporter E4184_05460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4184_05470 PF00528 Binding-protein-dependent transport system inner membrane component E4184_05470 PF12911 N-terminal TM domain of oligopeptide transport permease C E4184_05475 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E4184_05475 PF02779 Transketolase, pyrimidine binding domain E4184_05475 PF02780 Transketolase, C-terminal domain E4184_05480 PF00348 Polyprenyl synthetase E4184_05485 PF02609 Exonuclease VII small subunit E4184_05490 PF01618 MotA/TolQ/ExbB proton channel family E4184_05495 PF13677 Membrane MotB of proton-channel complex MotA/MotB E4184_05495 PF00691 OmpA family E4184_05500 PF04972 BON domain E4184_05510 PF00005 ABC transporter E4184_05510 PF03459 TOBE domain E4184_05525 PF09557 Domain of unknown function (DUF2382) E4184_05525 PF05239 PRC-barrel domain E4184_05530 PF01272 Transcription elongation factor, GreA/GreB, C-term E4184_05530 PF03449 Transcription elongation factor, N-terminal E4184_05540 PF01985 CRS1 / YhbY (CRM) domain E4184_05545 PF01728 FtsJ-like methyltransferase E4184_05550 PF00004 ATPase family associated with various cellular activities (AAA) E4184_05550 PF01434 Peptidase family M41 E4184_05550 PF06480 FtsH Extracellular E4184_05550 PF17862 AAA+ lid domain E4184_05555 PF00809 Pterin binding enzyme E4184_05560 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4184_05560 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4184_05560 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4184_05560 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4184_05565 PF00121 Triosephosphate isomerase E4184_05570 PF03840 Preprotein translocase SecG subunit E4184_05585 PF17384 RimP C-terminal SH3 domain E4184_05585 PF02576 RimP N-terminal domain E4184_05590 PF13184 NusA-like KH domain E4184_05590 PF00575 S1 RNA binding domain E4184_05590 PF08529 NusA N-terminal domain E4184_05595 PF00009 Elongation factor Tu GTP binding domain E4184_05595 PF11987 Translation-initiation factor 2 E4184_05595 PF04760 Translation initiation factor IF-2, N-terminal region E4184_05595 PF08364 Bacterial translation initiation factor IF-2 associated region E4184_05600 PF02033 Ribosome-binding factor A E4184_05605 PF09157 Pseudouridine synthase II TruB, C-terminal E4184_05605 PF16198 tRNA pseudouridylate synthase B C-terminal domain E4184_05605 PF01509 TruB family pseudouridylate synthase (N terminal domain) E4184_05610 PF00312 Ribosomal protein S15 E4184_05615 PF00575 S1 RNA binding domain E4184_05615 PF01138 3' exoribonuclease family, domain 1 E4184_05615 PF00013 KH domain E4184_05615 PF03725 3' exoribonuclease family, domain 2 E4184_05615 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain E4184_05620 PF07690 Major Facilitator Superfamily E4184_05625 PF02635 DsrE/DsrF-like family E4184_05635 PF12838 4Fe-4S dicluster domain E4184_05645 PF03734 L,D-transpeptidase catalytic domain E4184_05645 PF17969 L,D-transpeptidase C-terminal domain E4184_05655 PF01523 Putative modulator of DNA gyrase E4184_05665 PF01609 Transposase DDE domain E4184_05675 PF00258 Flavodoxin E4184_05680 PF00589 Phage integrase family E4184_05680 PF02899 Phage integrase, N-terminal SAM-like domain E4184_05685 PF01741 Large-conductance mechanosensitive channel, MscL E4184_05695 PF02272 DHHA1 domain E4184_05695 PF17768 RecJ OB domain E4184_05695 PF01368 DHH family E4184_05700 PF13411 MerR HTH family regulatory protein E4184_05705 PF00583 Acetyltransferase (GNAT) family E4184_05715 PF02508 Rnf-Nqr subunit, membrane protein E4184_05725 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family E4184_05725 PF04055 Radical SAM superfamily E4184_05735 PF03099 Biotin/lipoate A/B protein ligase family E4184_05740 PF04359 Protein of unknown function (DUF493) E4184_05745 PF07943 Penicillin-binding protein 5, C-terminal domain E4184_05745 PF00768 D-alanyl-D-alanine carboxypeptidase E4184_05750 PF05036 Sporulation related domain E4184_05750 PF03330 Lytic transglycolase E4184_05755 PF13406 Transglycosylase SLT domain E4184_05765 PF01098 Cell cycle protein E4184_05770 PF00905 Penicillin binding protein transpeptidase domain E4184_05770 PF03717 Penicillin-binding Protein dimerisation domain E4184_05775 PF02590 Predicted SPOUT methyltransferase E4184_05785 PF01467 Cytidylyltransferase-like E4184_05800 PF00133 tRNA synthetases class I (I, L, M and V) E4184_05800 PF13603 Leucyl-tRNA synthetase, Domain 2 E4184_05800 PF08264 Anticodon-binding domain of tRNA E4184_05805 PF07295 Zinc-ribbon containing domain E4184_05810 PF00795 Carbon-nitrogen hydrolase E4184_05815 PF00571 CBS domain E4184_05815 PF03471 Transporter associated domain E4184_05825 PF02130 Uncharacterized protein family UPF0054 E4184_05830 PF02562 PhoH-like protein E4184_05835 PF01938 TRAM domain E4184_05835 PF04055 Radical SAM superfamily E4184_05835 PF00919 Uncharacterized protein family UPF0004 E4184_05840 PF01494 FAD binding domain E4184_05855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_05855 PF03466 LysR substrate binding domain E4184_05865 PF13419 Haloacid dehalogenase-like hydrolase E4184_05875 PF07694 5TMR of 5TMR-LYT E4184_05875 PF00990 Diguanylate cyclase, GGDEF domain E4184_05885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4184_05885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4184_05895 PF09997 Predicted membrane protein (DUF2238) E4184_05900 PF08207 Elongation factor P (EF-P) KOW-like domain E4184_05900 PF09285 Elongation factor P, C-terminal E4184_05900 PF01132 Elongation factor P (EF-P) OB domain E4184_05915 PF00478 IMP dehydrogenase / GMP reductase domain E4184_05925 PF08521 Two-component sensor kinase N-terminal E4184_05925 PF00512 His Kinase A (phospho-acceptor) domain E4184_05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_05930 PF00072 Response regulator receiver domain E4184_05930 PF00486 Transcriptional regulatory protein, C terminal E4184_05940 PF00106 short chain dehydrogenase E4184_05950 PF00501 AMP-binding enzyme E4184_05960 PF13649 Methyltransferase domain E4184_05965 PF06224 Winged helix DNA-binding domain E4184_05970 PF02313 Fumarate reductase subunit D E4184_05975 PF02300 Fumarate reductase subunit C E4184_05980 PF13183 4Fe-4S dicluster domain E4184_05980 PF13085 2Fe-2S iron-sulfur cluster binding domain E4184_05985 PF02910 Fumarate reductase flavoprotein C-term E4184_05985 PF00890 FAD binding domain E4184_05990 PF00672 HAMP domain E4184_05990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_05990 PF02743 Cache domain E4184_05995 PF03009 Glycerophosphoryl diester phosphodiesterase family E4184_06000 PF00924 Mechanosensitive ion channel E4184_06000 PF12795 Mechanosensitive ion channel porin domain E4184_06000 PF12794 Mechanosensitive ion channel inner membrane domain 1 E4184_06005 PF01554 MatE E4184_06010 PF08525 Opacity-associated protein A N-terminal motif E4184_06010 PF01551 Peptidase family M23 E4184_06010 PF01476 LysM domain E4184_06020 PF02753 Pili assembly chaperone PapD, C-terminal domain E4184_06020 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain E4184_06025 PF13954 PapC N-terminal domain E4184_06025 PF13953 PapC C-terminal domain E4184_06025 PF00577 Outer membrane usher protein E4184_06045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_06045 PF03466 LysR substrate binding domain E4184_06060 PF03466 LysR substrate binding domain E4184_06060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_06065 PF17092 Penicillin-binding protein OB-like domain E4184_06065 PF00912 Transglycosylase E4184_06065 PF00905 Penicillin binding protein transpeptidase domain E4184_06090 PF00263 Bacterial type II and III secretion system protein E4184_06090 PF11741 AMIN domain E4184_06090 PF07660 Secretin and TonB N terminus short domain E4184_06090 PF03958 Bacterial type II/III secretion system short domain E4184_06095 PF01202 Shikimate kinase E4184_06100 PF01761 3-dehydroquinate synthase E4184_06110 PF02086 D12 class N6 adenine-specific DNA methyltransferase E4184_06115 PF00834 Ribulose-phosphate 3 epimerase family E4184_06120 PF13419 Haloacid dehalogenase-like hydrolase E4184_06125 PF00579 tRNA synthetases class I (W and Y) E4184_06135 PF00117 Glutamine amidotransferase class-I E4184_06140 PF00202 Aminotransferase class-III E4184_06145 PF04958 Arginine N-succinyltransferase beta subunit E4184_06150 PF00171 Aldehyde dehydrogenase family E4184_06160 PF13419 Haloacid dehalogenase-like hydrolase E4184_06165 PF07690 Major Facilitator Superfamily E4184_06170 PF07690 Major Facilitator Superfamily E4184_06175 PF00005 ABC transporter E4184_06175 PF12848 ABC transporter E4184_06185 PF16657 Maltogenic Amylase, C-terminal domain E4184_06185 PF00128 Alpha amylase, catalytic domain E4184_06195 PF07859 alpha/beta hydrolase fold E4184_06205 PF03600 Citrate transporter E4184_06205 PF02080 TrkA-C domain E4184_06250 PF06071 Protein of unknown function (DUF933) E4184_06250 PF01926 50S ribosome-binding GTPase E4184_06260 PF01195 Peptidyl-tRNA hydrolase E4184_06265 PF02872 5'-nucleotidase, C-terminal domain E4184_06265 PF00149 Calcineurin-like phosphoesterase E4184_06270 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase E4184_06270 PF14572 Phosphoribosyl synthetase-associated domain E4184_06280 PF00288 GHMP kinases N terminal domain E4184_06280 PF08544 GHMP kinases C terminal E4184_06285 PF03550 Outer membrane lipoprotein LolB E4184_06290 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain E4184_06290 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain E4184_06290 PF01488 Shikimate / quinate 5-dehydrogenase E4184_06295 PF00472 RF-1 domain E4184_06295 PF03462 PCRF domain E4184_06300 PF17827 PrmC N-terminal domain E4184_06300 PF13847 Methyltransferase domain E4184_06310 PF13369 Transglutaminase-like superfamily E4184_06315 PF00793 DAHP synthetase I family E4184_06325 PF01228 Glycine radical E4184_06330 PF03167 Uracil DNA glycosylase superfamily E4184_06345 PF00923 Transaldolase/Fructose-6-phosphate aldolase E4184_06350 PF01235 Sodium:alanine symporter family E4184_06355 PF00144 Beta-lactamase E4184_06360 PF07690 Major Facilitator Superfamily E4184_06365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_06365 PF03466 LysR substrate binding domain E4184_06370 PF03652 Holliday junction resolvase E4184_06375 PF02622 Uncharacterized ACR, COG1678 E4184_06380 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain E4184_06380 PF02951 Prokaryotic glutathione synthetase, N-terminal domain E4184_06385 PF04452 RNA methyltransferase E4184_06390 PF04231 Endonuclease I E4184_06395 PF17283 SprT-like zinc ribbon domain E4184_06395 PF10263 SprT-like family E4184_06400 PF00438 S-adenosylmethionine synthetase, N-terminal domain E4184_06400 PF02772 S-adenosylmethionine synthetase, central domain E4184_06400 PF02773 S-adenosylmethionine synthetase, C-terminal domain E4184_06405 PF02779 Transketolase, pyrimidine binding domain E4184_06405 PF00456 Transketolase, thiamine diphosphate binding domain E4184_06405 PF02780 Transketolase, C-terminal domain E4184_06425 PF01042 Endoribonuclease L-PSP E4184_06435 PF00583 Acetyltransferase (GNAT) family E4184_06445 PF03702 Anhydro-N-acetylmuramic acid kinase E4184_06450 PF08525 Opacity-associated protein A N-terminal motif E4184_06450 PF01551 Peptidase family M23 E4184_06450 PF01476 LysM domain E4184_06455 PF00579 tRNA synthetases class I (W and Y) E4184_06460 PF01204 Trehalase E4184_06470 PF01161 Phosphatidylethanolamine-binding protein E4184_06480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_06480 PF03466 LysR substrate binding domain E4184_06490 PF00155 Aminotransferase class I and II E4184_06495 PF07690 Major Facilitator Superfamily E4184_06500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_06500 PF03466 LysR substrate binding domain E4184_06505 PF00106 short chain dehydrogenase E4184_06510 PF08496 Peptidase family S49 N-terminal E4184_06510 PF01343 Peptidase family S49 E4184_06515 PF04996 Succinylarginine dihydrolase E4184_06520 PF01751 Toprim domain E4184_06520 PF01131 DNA topoisomerase E4184_06520 PF08272 Topoisomerase I zinc-ribbon-like E4184_06520 PF01396 Topoisomerase DNA binding C4 zinc finger E4184_06530 PF08447 PAS fold E4184_06530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_06535 PF02838 Glycosyl hydrolase family 20, domain 2 E4184_06535 PF00728 Glycosyl hydrolase family 20, catalytic domain E4184_06540 PF01869 BadF/BadG/BcrA/BcrD ATPase family E4184_06550 PF00005 ABC transporter E4184_06550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4184_06555 PF00005 ABC transporter E4184_06555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4184_06560 PF12911 N-terminal TM domain of oligopeptide transport permease C E4184_06560 PF00528 Binding-protein-dependent transport system inner membrane component E4184_06565 PF00528 Binding-protein-dependent transport system inner membrane component E4184_06570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4184_06580 PF11713 Peptidase C80 family E4184_06580 PF16671 Actin cross-linking domain E4184_06580 PF12146 Serine aminopeptidase, S33 E4184_06580 PF11647 Membrane Localization Domain E4184_06580 PF07634 RtxA repeat E4184_06590 PF04055 Radical SAM superfamily E4184_06590 PF18693 TRAM domain E4184_06590 PF00919 Uncharacterized protein family UPF0004 E4184_06610 PF02049 Flagellar hook-basal body complex protein FliE E4184_06615 PF01514 Secretory protein of YscJ/FliF family E4184_06615 PF08345 Flagellar M-ring protein C-terminal E4184_06620 PF14841 FliG middle domain E4184_06620 PF01706 FliG C-terminal domain E4184_06620 PF14842 FliG N-terminal domain E4184_06630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4184_06630 PF18269 T3SS EscN ATPase C-terminal domain E4184_06650 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4184_06650 PF02154 Flagellar motor switch protein FliM E4184_06655 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4184_06660 PF04347 Flagellar biosynthesis protein, FliO E4184_06665 PF00813 FliP family E4184_06670 PF01313 Bacterial export proteins, family 3 E4184_06675 PF01311 Bacterial export proteins, family 1 E4184_06680 PF01312 FlhB HrpN YscU SpaS Family E4184_06685 PF00771 FHIPEP family E4184_06690 PF00448 SRP54-type protein, GTPase domain E4184_06695 PF10609 NUBPL iron-transfer P-loop NTPase E4184_06700 PF04539 Sigma-70 region 3 E4184_06700 PF04542 Sigma-70 region 2 E4184_06700 PF04545 Sigma-70, region 4 E4184_06705 PF00072 Response regulator receiver domain E4184_06710 PF04344 Chemotaxis phosphatase, CheZ E4184_06715 PF01584 CheW-like domain E4184_06715 PF02895 Signal transducing histidine kinase, homodimeric domain E4184_06715 PF00072 Response regulator receiver domain E4184_06715 PF01627 Hpt domain E4184_06715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_06720 PF00072 Response regulator receiver domain E4184_06720 PF01339 CheB methylesterase E4184_06725 PF01618 MotA/TolQ/ExbB proton channel family E4184_06730 PF13677 Membrane MotB of proton-channel complex MotA/MotB E4184_06730 PF00691 OmpA family E4184_06735 PF13614 AAA domain E4184_06745 PF01584 CheW-like domain E4184_06755 PF00005 ABC transporter E4184_06760 PF03379 CcmB protein E4184_06765 PF01578 Cytochrome C assembly protein E4184_06770 PF04995 Heme exporter protein D (CcmD) E4184_06775 PF03100 CcmE E4184_06780 PF01578 Cytochrome C assembly protein E4184_06780 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal E4184_06785 PF08534 Redoxin E4184_06790 PF03918 Cytochrome C biogenesis protein E4184_06800 PF04333 MlaA lipoprotein E4184_06805 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E4184_06805 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E4184_06810 PF00462 Glutaredoxin E4184_06815 PF01029 NusB family E4184_06815 PF01189 16S rRNA methyltransferase RsmB/F E4184_06830 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region E4184_06830 PF01243 Pyridoxamine 5'-phosphate oxidase E4184_06835 PF03466 LysR substrate binding domain E4184_06835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_06840 PF01546 Peptidase family M20/M25/M40 E4184_06860 PF13508 Acetyltransferase (GNAT) domain E4184_06885 PF11798 IMS family HHH motif E4184_06885 PF11799 impB/mucB/samB family C-terminal domain E4184_06885 PF00817 impB/mucB/samB family E4184_06885 PF13438 Domain of unknown function (DUF4113) E4184_06890 PF00717 Peptidase S24-like E4184_06920 PF13356 Arm DNA-binding domain E4184_06920 PF00589 Phage integrase family E4184_06930 PF01668 SmpB protein E4184_06935 PF03364 Polyketide cyclase / dehydrase and lipid transport E4184_06945 PF13460 NAD(P)H-binding E4184_06950 PF04355 SmpA / OmlA family E4184_06955 PF00465 Iron-containing alcohol dehydrogenase E4184_06960 PF01048 Phosphorylase superfamily E4184_06965 PF00849 RNA pseudouridylate synthase E4184_06970 PF01156 Inosine-uridine preferring nucleoside hydrolase E4184_06985 PF07509 Protein of unknown function (DUF1523) E4184_06990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_06990 PF12729 Four helix bundle sensory module for signal transduction E4184_06990 PF00672 HAMP domain E4184_06995 PF01810 LysE type translocator E4184_07005 PF00999 Sodium/hydrogen exchanger family E4184_07005 PF03471 Transporter associated domain E4184_07005 PF02080 TrkA-C domain E4184_07020 PF02557 D-alanyl-D-alanine carboxypeptidase E4184_07025 PF01546 Peptidase family M20/M25/M40 E4184_07025 PF07687 Peptidase dimerisation domain E4184_07030 PF03960 ArsC family E4184_07040 PF03606 C4-dicarboxylate anaerobic carrier E4184_07045 PF07687 Peptidase dimerisation domain E4184_07045 PF01546 Peptidase family M20/M25/M40 E4184_07055 PF03605 Anaerobic c4-dicarboxylate membrane transporter E4184_07060 PF00152 tRNA synthetases class II (D, K and N) E4184_07060 PF01336 OB-fold nucleic acid binding domain E4184_07075 PF00202 Aminotransferase class-III E4184_07080 PF06968 Biotin and Thiamin Synthesis associated domain E4184_07080 PF04055 Radical SAM superfamily E4184_07085 PF00155 Aminotransferase class I and II E4184_07090 PF08241 Methyltransferase domain E4184_07090 PF12697 Alpha/beta hydrolase family E4184_07100 PF01435 Peptidase family M48 E4184_07105 PF00111 2Fe-2S iron-sulfur cluster binding domain E4184_07105 PF03473 MOSC domain E4184_07105 PF03476 MOSC N-terminal beta barrel domain E4184_07105 PF03476 MOSC N-terminal beta barrel domain E4184_07105 PF03473 MOSC domain E4184_07105 PF00111 2Fe-2S iron-sulfur cluster binding domain E4184_07110 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E4184_07110 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4184_07110 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4184_07115 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E4184_07115 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E4184_07115 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E4184_07115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4184_07115 PF10371 Domain of unknown function E4184_07120 PF04325 Protein of unknown function (DUF465) E4184_07130 PF01554 MatE E4184_07150 PF00291 Pyridoxal-phosphate dependent enzyme E4184_07155 PF00465 Iron-containing alcohol dehydrogenase E4184_07165 PF00440 Bacterial regulatory proteins, tetR family E4184_07165 PF08359 YsiA-like protein, C-terminal region E4184_07170 PF00171 Aldehyde dehydrogenase family E4184_07180 PF00877 NlpC/P60 family E4184_07185 PF03466 LysR substrate binding domain E4184_07185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_07205 PF08003 Protein of unknown function (DUF1698) E4184_07210 PF13649 Methyltransferase domain E4184_07215 PF01904 Protein of unknown function DUF72 E4184_07225 PF02938 GAD domain E4184_07225 PF00152 tRNA synthetases class II (D, K and N) E4184_07225 PF01336 OB-fold nucleic acid binding domain E4184_07230 PF01709 Transcriptional regulator E4184_07235 PF08019 Phosphoethanolamine transferase EptA/EptB E4184_07235 PF00884 Sulfatase E4184_07240 PF00480 ROK family E4184_07240 PF01047 MarR family E4184_07245 PF01979 Amidohydrolase family E4184_07250 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase E4184_07255 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E4184_07255 PF00367 phosphotransferase system, EIIB E4184_07255 PF02378 Phosphotransferase system, EIIC E4184_07260 PF03173 Putative carbohydrate binding domain E4184_07260 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain E4184_07260 PF00728 Glycosyl hydrolase family 20, catalytic domain E4184_07260 PF02838 Glycosyl hydrolase family 20, domain 2 E4184_07275 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase E4184_07275 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E4184_07275 PF00034 Cytochrome c E4184_07280 PF00111 2Fe-2S iron-sulfur cluster binding domain E4184_07280 PF01799 [2Fe-2S] binding domain E4184_07285 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain E4184_07285 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase E4184_07295 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain E4184_07295 PF00749 tRNA synthetases class I (E and Q), catalytic domain E4184_07300 PF01475 Ferric uptake regulator family E4184_07310 PF00258 Flavodoxin E4184_07315 PF01402 Ribbon-helix-helix protein, copG family E4184_07325 PF00561 alpha/beta hydrolase fold E4184_07330 PF03925 SeqA protein C-terminal domain E4184_07330 PF17206 SeqA protein N-terminal domain E4184_07335 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4184_07335 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4184_07335 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4184_07335 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4184_07345 PF12802 MarR family E4184_07350 PF13406 Transglycosylase SLT domain E4184_07355 PF01066 CDP-alcohol phosphatidyltransferase E4184_07360 PF00005 ABC transporter E4184_07370 PF13416 Bacterial extracellular solute-binding protein E4184_07375 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4184_07375 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4184_07375 PF00403 Heavy-metal-associated domain E4184_07380 PF02627 Carboxymuconolactone decarboxylase family E4184_07400 PF07244 Surface antigen variable number repeat E4184_07400 PF01103 Surface antigen E4184_07400 PF17243 POTRA domain TamA domain 1 E4184_07405 PF04357 TamB, inner membrane protein subunit of TAM complex E4184_07425 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein E4184_07430 PF00563 EAL domain E4184_07430 PF00990 Diguanylate cyclase, GGDEF domain E4184_07430 PF03707 Bacterial signalling protein N terminal repeat E4184_07435 PF01464 Transglycosylase SLT domain E4184_07435 PF14718 Soluble lytic murein transglycosylase L domain E4184_07440 PF00356 Bacterial regulatory proteins, lacI family E4184_07450 PF03061 Thioesterase superfamily E4184_07460 PF03372 Endonuclease/Exonuclease/phosphatase family E4184_07465 PF01476 LysM domain E4184_07465 PF01464 Transglycosylase SLT domain E4184_07470 PF16123 Hydroxyacylglutathione hydrolase C-terminus E4184_07470 PF00753 Metallo-beta-lactamase superfamily E4184_07475 PF08241 Methyltransferase domain E4184_07480 PF00075 RNase H E4184_07485 PF00929 Exonuclease E4184_07500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E4184_07500 PF09317 Domain of unknown function (DUF1974) E4184_07500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E4184_07500 PF02770 Acyl-CoA dehydrogenase, middle domain E4184_07505 PF13580 SIS domain E4184_07510 PF13230 Glutamine amidotransferases class-II E4184_07520 PF01933 Uncharacterised protein family UPF0052 E4184_07530 PF00672 HAMP domain E4184_07530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_07530 PF01627 Hpt domain E4184_07530 PF17149 Periplasmic sensor domain found in signal transduction proteins E4184_07530 PF00512 His Kinase A (phospho-acceptor) domain E4184_07530 PF00072 Response regulator receiver domain E4184_07545 PF00072 Response regulator receiver domain E4184_07545 PF00196 Bacterial regulatory proteins, luxR family E4184_07550 PF00672 HAMP domain E4184_07550 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term E4184_07550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_07550 PF07730 Histidine kinase E4184_07555 PF04055 Radical SAM superfamily E4184_07555 PF06463 Molybdenum Cofactor Synthesis C E4184_07560 PF12838 4Fe-4S dicluster domain E4184_07560 PF13187 4Fe-4S dicluster domain E4184_07570 PF01568 Molydopterin dinucleotide binding domain E4184_07570 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E4184_07570 PF00384 Molybdopterin oxidoreductase E4184_07570 PF10518 TAT (twin-arginine translocation) pathway signal sequence E4184_07575 PF12800 4Fe-4S binding domain E4184_07575 PF12838 4Fe-4S dicluster domain E4184_07580 PF12801 4Fe-4S binding domain E4184_07580 PF13237 4Fe-4S dicluster domain E4184_07585 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) E4184_07590 PF03264 NapC/NirT cytochrome c family, N-terminal region E4184_07595 PF00994 Probable molybdopterin binding domain E4184_07600 PF01967 MoaC family E4184_07605 PF02597 ThiS family E4184_07610 PF02391 MoaE protein E4184_07620 PF00528 Binding-protein-dependent transport system inner membrane component E4184_07625 PF03459 TOBE domain E4184_07625 PF00005 ABC transporter E4184_07630 PF00561 alpha/beta hydrolase fold E4184_07635 PF00899 ThiF family E4184_07640 PF03454 MoeA C-terminal region (domain IV) E4184_07640 PF00994 Probable molybdopterin binding domain E4184_07640 PF03453 MoeA N-terminal region (domain I and II) E4184_07645 PF01227 GTP cyclohydrolase I E4184_07650 PF17200 Single Cache domain 2 E4184_07650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_07650 PF00672 HAMP domain E4184_07655 PF01268 Formate--tetrahydrofolate ligase E4184_07665 PF03466 LysR substrate binding domain E4184_07665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_07670 PF04264 YceI-like domain E4184_07680 PF05221 S-adenosyl-L-homocysteine hydrolase E4184_07680 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain E4184_07695 PF07687 Peptidase dimerisation domain E4184_07695 PF01546 Peptidase family M20/M25/M40 E4184_07710 PF17810 Arginine decarboxylase helical bundle domain E4184_07710 PF17944 Arginine decarboxylase C-terminal helical extension E4184_07710 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E4184_07720 PF00563 EAL domain E4184_07720 PF00990 Diguanylate cyclase, GGDEF domain E4184_07720 PF03707 Bacterial signalling protein N terminal repeat E4184_07725 PF04851 Type III restriction enzyme, res subunit E4184_07725 PF00271 Helicase conserved C-terminal domain E4184_07735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4184_07745 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E4184_07745 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E4184_07750 PF01479 S4 domain E4184_07750 PF00849 RNA pseudouridylate synthase E4184_07755 PF07690 Major Facilitator Superfamily E4184_07765 PF03466 LysR substrate binding domain E4184_07765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_07775 PF10689 Protein of unknown function (DUF2496) E4184_07795 PF04391 Protein of unknown function (DUF533) E4184_07805 PF00155 Aminotransferase class I and II E4184_07805 PF00392 Bacterial regulatory proteins, gntR family E4184_07810 PF01654 Cytochrome bd terminal oxidase subunit I E4184_07815 PF02322 Cytochrome bd terminal oxidase subunit II E4184_07825 PF07690 Major Facilitator Superfamily E4184_07830 PF00248 Aldo/keto reductase family E4184_07855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_07855 PF03466 LysR substrate binding domain E4184_07860 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4184_07860 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4184_07865 PF00230 Major intrinsic protein E4184_07870 PF07690 Major Facilitator Superfamily E4184_07875 PF08220 DeoR-like helix-turn-helix domain E4184_07875 PF00455 DeoR C terminal sensor domain E4184_07880 PF16901 C-terminal domain of alpha-glycerophosphate oxidase E4184_07880 PF01266 FAD dependent oxidoreductase E4184_07885 PF03009 Glycerophosphoryl diester phosphodiesterase family E4184_07890 PF00793 DAHP synthetase I family E4184_07895 PF01817 Chorismate mutase type II E4184_07895 PF02153 Prephenate dehydrogenase E4184_07900 PF03466 LysR substrate binding domain E4184_07900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_07905 PF04219 Protein of unknown function, DUF E4184_07910 PF03974 Ecotin E4184_07930 PF00326 Prolyl oligopeptidase family E4184_07930 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4184_07940 PF11893 Domain of unknown function (DUF3413) E4184_07940 PF00884 Sulfatase E4184_07945 PF07208 Protein of unknown function (DUF1414) E4184_07950 PF04245 37-kD nucleoid-associated bacterial protein E4184_07955 PF01547 Bacterial extracellular solute-binding protein E4184_07960 PF14785 Maltose transport system permease protein MalF P2 domain E4184_07960 PF00528 Binding-protein-dependent transport system inner membrane component E4184_07965 PF00528 Binding-protein-dependent transport system inner membrane component E4184_07970 PF00005 ABC transporter E4184_07970 PF08402 TOBE domain E4184_07975 PF03976 Polyphosphate kinase 2 (PPK2) E4184_07980 PF00561 alpha/beta hydrolase fold E4184_07990 PF01594 AI-2E family transporter E4184_07995 PF01206 Sulfurtransferase TusA E4184_08000 PF13181 Tetratricopeptide repeat E4184_08000 PF01435 Peptidase family M48 E4184_08005 PF00578 AhpC/TSA family E4184_08010 PF03960 ArsC family E4184_08020 PF04336 Acyl carrier protein phosphodiesterase E4184_08025 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4184_08030 PF01979 Amidohydrolase family E4184_08035 PF03956 Lysine exporter LysO E4184_08040 PF00005 ABC transporter E4184_08045 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4184_08050 PF00528 Binding-protein-dependent transport system inner membrane component E4184_08055 PF00528 Binding-protein-dependent transport system inner membrane component E4184_08065 PF04055 Radical SAM superfamily E4184_08070 PF00990 Diguanylate cyclase, GGDEF domain E4184_08070 PF03707 Bacterial signalling protein N terminal repeat E4184_08070 PF00563 EAL domain E4184_08075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4184_08075 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4184_08090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4184_08090 PF00529 HlyD membrane-fusion protein of T1SS E4184_08095 PF02321 Outer membrane efflux protein E4184_08110 PF01609 Transposase DDE domain E4184_08110 PF05598 Transposase domain (DUF772) E4184_08115 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain E4184_08115 PF17962 Bacterial macroglobulin domain 6 E4184_08115 PF00207 Alpha-2-macroglobulin family E4184_08115 PF11974 Bacterial alpha-2-macroglobulin MG3 domain E4184_08115 PF07678 A-macroglobulin TED domain E4184_08115 PF01835 MG2 domain E4184_08115 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain E4184_08115 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain E4184_08115 PF07703 Alpha-2-macroglobulin bait region domain E4184_08120 PF00905 Penicillin binding protein transpeptidase domain E4184_08120 PF00912 Transglycosylase E4184_08120 PF06832 Penicillin-Binding Protein C-terminus Family E4184_08130 PF02926 THUMP domain E4184_08130 PF02568 Thiamine biosynthesis protein (ThiI) E4184_08140 PF03458 UPF0126 domain E4184_08150 PF00700 Bacterial flagellin C-terminal helical region E4184_08150 PF00669 Bacterial flagellin N-terminal helical region E4184_08150 PF07196 Flagellin hook IN motif E4184_08155 PF03646 FlaG protein E4184_08160 PF07196 Flagellin hook IN motif E4184_08160 PF07195 Flagellar hook-associated protein 2 C-terminus E4184_08160 PF02465 Flagellar hook-associated protein 2 N-terminus E4184_08165 PF02561 Flagellar protein FliS E4184_08185 PF01497 Periplasmic binding protein E4184_08195 PF01048 Phosphorylase superfamily E4184_08205 PF02535 ZIP Zinc transporter E4184_08210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_08210 PF00672 HAMP domain E4184_08210 PF12729 Four helix bundle sensory module for signal transduction E4184_08215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4184_08220 PF00730 HhH-GPD superfamily base excision DNA repair protein E4184_08220 PF10576 Iron-sulfur binding domain of endonuclease III E4184_08220 PF00633 Helix-hairpin-helix motif E4184_08230 PF04205 FMN-binding domain E4184_08235 PF03116 NQR2, RnfD, RnfE family E4184_08240 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4184_08240 PF12838 4Fe-4S dicluster domain E4184_08240 PF13375 RnfC Barrel sandwich hybrid domain E4184_08240 PF10531 SLBB domain E4184_08245 PF04060 Putative Fe-S cluster E4184_08250 PF02508 Rnf-Nqr subunit, membrane protein E4184_08255 PF00892 EamA-like transporter family E4184_08265 PF13426 PAS domain E4184_08265 PF08447 PAS fold E4184_08265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_08275 PF12241 Trans-2-enoyl-CoA reductase catalytic region E4184_08275 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase E4184_08275 PF07055 Enoyl reductase FAD binding domain E4184_08285 PF00155 Aminotransferase class I and II E4184_08295 PF00462 Glutaredoxin E4184_08300 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family E4184_08305 PF04851 Type III restriction enzyme, res subunit E4184_08305 PF00271 Helicase conserved C-terminal domain E4184_08310 PF00529 HlyD membrane-fusion protein of T1SS E4184_08310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4184_08315 PF11742 Protein of unknown function (DUF3302) E4184_08320 PF12794 Mechanosensitive ion channel inner membrane domain 1 E4184_08320 PF12795 Mechanosensitive ion channel porin domain E4184_08320 PF00924 Mechanosensitive ion channel E4184_08325 PF02554 Carbon starvation protein CstA E4184_08330 PF00072 Response regulator receiver domain E4184_08330 PF04397 LytTr DNA-binding domain E4184_08335 PF07694 5TMR of 5TMR-LYT E4184_08335 PF06580 Histidine kinase E4184_08340 PF01966 HD domain E4184_08340 PF11871 Domain of unknown function (DUF3391) E4184_08345 PF00171 Aldehyde dehydrogenase family E4184_08345 PF00465 Iron-containing alcohol dehydrogenase E4184_08350 PF01914 MarC family integral membrane protein E4184_08355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4184_08360 PF00528 Binding-protein-dependent transport system inner membrane component E4184_08365 PF00528 Binding-protein-dependent transport system inner membrane component E4184_08365 PF12911 N-terminal TM domain of oligopeptide transport permease C E4184_08370 PF00005 ABC transporter E4184_08370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4184_08380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4184_08380 PF00005 ABC transporter E4184_08385 PF03741 Integral membrane protein TerC family E4184_08390 PF01168 Alanine racemase, N-terminal domain E4184_08390 PF00842 Alanine racemase, C-terminal domain E4184_08400 PF00375 Sodium:dicarboxylate symporter family E4184_08415 PF01979 Amidohydrolase family E4184_08425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_08425 PF00672 HAMP domain E4184_08430 PF01230 HIT domain E4184_08465 PF02355 Protein export membrane protein E4184_08465 PF13721 SecD export protein N-terminal TM region E4184_08465 PF07549 SecD/SecF GG Motif E4184_08470 PF07549 SecD/SecF GG Motif E4184_08470 PF02355 Protein export membrane protein E4184_08480 PF05661 Protein of unknown function (DUF808) E4184_08485 PF08439 Oligopeptidase F E4184_08485 PF01432 Peptidase family M3 E4184_08490 PF08439 Oligopeptidase F E4184_08490 PF01432 Peptidase family M3 E4184_08495 PF05728 Uncharacterised protein family (UPF0227) E4184_08500 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4184_08510 PF01906 Putative heavy-metal-binding E4184_08515 PF00884 Sulfatase E4184_08525 PF01842 ACT domain E4184_08525 PF00696 Amino acid kinase family E4184_08530 PF00583 Acetyltransferase (GNAT) family E4184_08530 PF00696 Amino acid kinase family E4184_08535 PF01625 Peptide methionine sulfoxide reductase E4184_08595 PF00005 ABC transporter E4184_08610 PF03600 Citrate transporter E4184_08620 PF07690 Major Facilitator Superfamily E4184_08640 PF01593 Flavin containing amine oxidoreductase E4184_08645 PF03239 Iron permease FTR1 family E4184_08675 PF14403 Circularly permuted ATP-grasp type 2 E4184_08675 PF04168 A predicted alpha-helical domain with a conserved ER motif. E4184_08680 PF14403 Circularly permuted ATP-grasp type 2 E4184_08695 PF01740 STAS domain E4184_08695 PF00916 Sulfate permease family E4184_08715 PF13358 DDE superfamily endonuclease E4184_08715 PF13592 Winged helix-turn helix E4184_08725 PF02384 N-6 DNA Methylase E4184_08745 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A E4184_08760 PF00483 Nucleotidyl transferase E4184_08770 PF07273 Protein of unknown function (DUF1439) E4184_08785 PF00717 Peptidase S24-like E4184_08800 PF02384 N-6 DNA Methylase E4184_08800 PF12161 HsdM N-terminal domain E4184_08805 PF01420 Type I restriction modification DNA specificity domain E4184_08820 PF18766 SWI2/SNF2 ATPase E4184_08820 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) E4184_08820 PF11867 Domain of unknown function (DUF3387) E4184_08835 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A E4184_08885 PF04002 RadC-like JAB domain E4184_08930 PF09588 YqaJ-like viral recombinase domain E4184_08945 PF13358 DDE superfamily endonuclease E4184_08945 PF13592 Winged helix-turn helix E4184_08970 PF01926 50S ribosome-binding GTPase E4184_08970 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E4184_08980 PF08447 PAS fold E4184_08980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_08980 PF13426 PAS domain E4184_09010 PF00665 Integrase core domain E4184_09035 PF02397 Bacterial sugar transferase E4184_09055 PF02706 Chain length determinant protein E4184_09055 PF13807 G-rich domain on putative tyrosine kinase E4184_09055 PF13614 AAA domain E4184_09060 PF09721 Transmembrane exosortase (Exosortase_EpsH) E4184_09075 PF00534 Glycosyl transferases group 1 E4184_09075 PF13439 Glycosyltransferase Family 4 E4184_09080 PF00150 Cellulase (glycosyl hydrolase family 5) E4184_09100 PF01501 Glycosyl transferase family 8 E4184_09110 PF01050 Mannose-6-phosphate isomerase E4184_09110 PF00483 Nucleotidyl transferase E4184_09115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4184_09115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4184_09115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4184_09115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4184_09120 PF05656 Protein of unknown function (DUF805) E4184_09125 PF00116 Cytochrome C oxidase subunit II, periplasmic domain E4184_09125 PF06481 COX Aromatic Rich Motif E4184_09130 PF00115 Cytochrome C and Quinol oxidase polypeptide I E4184_09135 PF00510 Cytochrome c oxidase subunit III E4184_09140 PF03626 Prokaryotic Cytochrome C oxidase subunit IV E4184_09145 PF01040 UbiA prenyltransferase family E4184_09150 PF07690 Major Facilitator Superfamily E4184_09165 PF02796 Helix-turn-helix domain of resolvase E4184_09165 PF00665 Integrase core domain E4184_09170 PF01695 IstB-like ATP binding protein E4184_09185 PF01695 IstB-like ATP binding protein E4184_09215 PF00440 Bacterial regulatory proteins, tetR family E4184_09220 PF02321 Outer membrane efflux protein E4184_09225 PF13533 Biotin-lipoyl like E4184_09230 PF00005 ABC transporter E4184_09250 PF04717 Type VI secretion system, phage-baseplate injector E4184_09265 PF13358 DDE superfamily endonuclease E4184_09265 PF13592 Winged helix-turn helix E4184_09275 PF00589 Phage integrase family E4184_09275 PF13356 Arm DNA-binding domain E4184_09295 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal E4184_09295 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E4184_09300 PF13247 4Fe-4S dicluster domain E4184_09305 PF03916 Polysulphide reductase, NrfD E4184_09310 PF00374 Nickel-dependent hydrogenase E4184_09315 PF01750 Hydrogenase maturation protease E4184_09320 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE E4184_09325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4184_09330 PF00528 Binding-protein-dependent transport system inner membrane component E4184_09335 PF00528 Binding-protein-dependent transport system inner membrane component E4184_09335 PF12911 N-terminal TM domain of oligopeptide transport permease C E4184_09340 PF00005 ABC transporter E4184_09345 PF00005 ABC transporter E4184_09350 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4184_09355 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA E4184_09360 PF02769 AIR synthase related protein, C-terminal domain E4184_09360 PF00586 AIR synthase related protein, N-terminal domain E4184_09365 PF01924 Hydrogenase formation hypA family E4184_09370 PF01455 HupF/HypC family E4184_09375 PF00708 Acylphosphatase E4184_09375 PF01300 Telomere recombination E4184_09375 PF07503 HypF finger E4184_09375 PF17788 HypF Kae1-like domain E4184_09380 PF02132 RecR protein E4184_09380 PF13662 Toprim domain E4184_09385 PF00183 Hsp90 protein E4184_09385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_09390 PF05191 Adenylate kinase, active site lid E4184_09395 PF00762 Ferrochelatase E4184_09405 PF00294 pfkB family carbohydrate kinase E4184_09410 PF17200 Single Cache domain 2 E4184_09410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_09410 PF00672 HAMP domain E4184_09425 PF03707 Bacterial signalling protein N terminal repeat E4184_09425 PF00990 Diguanylate cyclase, GGDEF domain E4184_09425 PF00563 EAL domain E4184_09430 PF00483 Nucleotidyl transferase E4184_09440 PF07273 Protein of unknown function (DUF1439) E4184_09445 PF00425 chorismate binding enzyme E4184_09450 PF00501 AMP-binding enzyme E4184_09450 PF13193 AMP-binding enzyme C-terminal domain E4184_09455 PF00550 Phosphopantetheine attachment site E4184_09455 PF00857 Isochorismatase family E4184_09460 PF13193 AMP-binding enzyme C-terminal domain E4184_09460 PF00501 AMP-binding enzyme E4184_09460 PF00668 Condensation domain E4184_09460 PF00550 Phosphopantetheine attachment site E4184_09460 PF00975 Thioesterase domain E4184_09470 PF07993 Male sterility protein E4184_09470 PF00668 Condensation domain E4184_09470 PF13193 AMP-binding enzyme C-terminal domain E4184_09470 PF00550 Phosphopantetheine attachment site E4184_09470 PF00501 AMP-binding enzyme E4184_09480 PF01497 Periplasmic binding protein E4184_09485 PF17837 4'-phosphopantetheinyl transferase N-terminal domain E4184_09485 PF01648 4'-phosphopantetheinyl transferase superfamily E4184_09490 PF00005 ABC transporter E4184_09495 PF01032 FecCD transport family E4184_09500 PF01032 FecCD transport family E4184_09505 PF00593 TonB dependent receptor E4184_09505 PF07715 TonB-dependent Receptor Plug Domain E4184_09520 PF11143 Protein of unknown function (DUF2919) E4184_09525 PF01544 CorA-like Mg2+ transporter protein E4184_09550 PF01012 Electron transfer flavoprotein domain E4184_09555 PF00766 Electron transfer flavoprotein FAD-binding domain E4184_09555 PF01012 Electron transfer flavoprotein domain E4184_09560 PF00266 Aminotransferase class-V E4184_09565 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4184_09570 PF00793 DAHP synthetase I family E4184_09575 PF03741 Integral membrane protein TerC family E4184_09585 PF08891 YfcL protein E4184_09590 PF00501 AMP-binding enzyme E4184_09595 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region E4184_09595 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E4184_09600 PF04172 LrgB-like family E4184_09605 PF03788 LrgA family E4184_09620 PF08411 Exonuclease C-terminal E4184_09620 PF00929 Exonuclease E4184_09625 PF13356 Arm DNA-binding domain E4184_09625 PF00589 Phage integrase family E4184_09625 PF14659 Phage integrase, N-terminal SAM-like domain E4184_09635 PF00436 Single-strand binding protein family E4184_09670 PF03120 NAD-dependent DNA ligase OB-fold domain E4184_09670 PF03119 NAD-dependent DNA ligase C4 zinc finger domain E4184_09670 PF12826 Helix-hairpin-helix motif E4184_09670 PF00533 BRCA1 C Terminus (BRCT) domain E4184_09670 PF01653 NAD-dependent DNA ligase adenylation domain E4184_09745 PF10549 ORF11CD3 domain E4184_09745 PF09669 Phage regulatory protein Rha (Phage_pRha) E4184_09760 PF05866 Endodeoxyribonuclease RusA E4184_09865 PF13358 DDE superfamily endonuclease E4184_09865 PF13592 Winged helix-turn helix E4184_09880 PF17482 Phage tail sheath C-terminal domain E4184_09880 PF04984 Phage tail sheath protein subtilisin-like domain E4184_09915 PF00149 Calcineurin-like phosphoesterase E4184_09920 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4184_09925 PF00795 Carbon-nitrogen hydrolase E4184_09930 PF00155 Aminotransferase class I and II E4184_09935 PF03466 LysR substrate binding domain E4184_09935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_09940 PF02610 L-arabinose isomerase E4184_09940 PF11762 L-arabinose isomerase C-terminal domain E4184_09945 PF00596 Class II Aldolase and Adducin N-terminal domain E4184_09950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4184_09955 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E4184_09960 PF00005 ABC transporter E4184_09965 PF02653 Branched-chain amino acid transport system / permease component E4184_09970 PF12833 Helix-turn-helix domain E4184_09970 PF02311 AraC-like ligand binding domain E4184_09975 PF00444 Ribosomal protein L36 E4184_09980 PF01197 Ribosomal protein L31 E4184_09995 PF01863 Protein of unknown function DUF45 E4184_10010 PF03606 C4-dicarboxylate anaerobic carrier E4184_10020 PF01266 FAD dependent oxidoreductase E4184_10020 PF05430 S-adenosyl-L-methionine-dependent methyltransferase E4184_10025 PF02801 Beta-ketoacyl synthase, C-terminal domain E4184_10025 PF00109 Beta-ketoacyl synthase, N-terminal domain E4184_10040 PF00285 Citrate synthase, C-terminal domain E4184_10045 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E4184_10050 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E4184_10055 PF00890 FAD binding domain E4184_10055 PF02910 Fumarate reductase flavoprotein C-term E4184_10060 PF13085 2Fe-2S iron-sulfur cluster binding domain E4184_10065 PF00676 Dehydrogenase E1 component E4184_10065 PF16870 2-oxoglutarate dehydrogenase C-terminal E4184_10065 PF16078 2-oxoglutarate dehydrogenase N-terminus E4184_10065 PF02779 Transketolase, pyrimidine binding domain E4184_10070 PF02817 e3 binding domain E4184_10070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E4184_10070 PF00364 Biotin-requiring enzyme E4184_10075 PF00549 CoA-ligase E4184_10075 PF08442 ATP-grasp domain E4184_10080 PF02629 CoA binding domain E4184_10080 PF00549 CoA-ligase E4184_10090 PF03692 Putative zinc- or iron-chelating domain E4184_10095 PF01266 FAD dependent oxidoreductase E4184_10100 PF00528 Binding-protein-dependent transport system inner membrane component E4184_10105 PF00005 ABC transporter E4184_10115 PF00392 Bacterial regulatory proteins, gntR family E4184_10115 PF07702 UTRA domain E4184_10120 PF00266 Aminotransferase class-V E4184_10135 PF02901 Pyruvate formate lyase-like E4184_10135 PF01228 Glycine radical E4184_10140 PF01226 Formate/nitrite transporter E4184_10145 PF18381 YcaO cyclodehydratase C-terminal domain E4184_10145 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding E4184_10155 PF13006 Insertion element 4 transposase N-terminal E4184_10155 PF01609 Transposase DDE domain E4184_10160 PF00893 Small Multidrug Resistance protein E4184_10165 PF01118 Semialdehyde dehydrogenase, NAD binding domain E4184_10165 PF02774 Semialdehyde dehydrogenase, dimerisation domain E4184_10170 PF00313 'Cold-shock' DNA-binding domain E4184_10175 PF02617 ATP-dependent Clp protease adaptor protein ClpS E4184_10180 PF02861 Clp amino terminal domain, pathogenicity island component E4184_10180 PF10431 C-terminal, D2-small domain, of ClpB protein E4184_10180 PF00004 ATPase family associated with various cellular activities (AAA) E4184_10180 PF07724 AAA domain (Cdc48 subfamily) E4184_10180 PF17871 AAA lid domain E4184_10185 PF01176 Translation initiation factor 1A / IF-1 E4184_10190 PF04376 Arginine-tRNA-protein transferase, N terminus E4184_10190 PF04377 Arginine-tRNA-protein transferase, C terminus E4184_10195 PF03588 Leucyl/phenylalanyl-tRNA protein transferase E4184_10200 PF05433 Glycine zipper 2TM domain E4184_10205 PF00990 Diguanylate cyclase, GGDEF domain E4184_10205 PF05230 MASE2 domain E4184_10210 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4184_10215 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E4184_10215 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E4184_10220 PF01037 Lrp/AsnC ligand binding domain E4184_10225 PF09397 Ftsk gamma domain E4184_10225 PF17854 FtsK alpha domain E4184_10225 PF13491 4TM region of DNA translocase FtsK/SpoIIIE E4184_10225 PF01580 FtsK/SpoIIIE family E4184_10230 PF03548 Outer membrane lipoprotein carrier protein LolA E4184_10235 PF00004 ATPase family associated with various cellular activities (AAA) E4184_10235 PF12002 MgsA AAA+ ATPase C terminal E4184_10235 PF16193 AAA C-terminal domain E4184_10240 PF02403 Seryl-tRNA synthetase N-terminal domain E4184_10240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4184_10245 PF02674 Colicin V production protein E4184_10250 PF00156 Phosphoribosyl transferase domain E4184_10255 PF00232 Glycosyl hydrolase family 1 E4184_10260 PF02378 Phosphotransferase system, EIIC E4184_10260 PF00367 phosphotransferase system, EIIB E4184_10265 PF00356 Bacterial regulatory proteins, lacI family E4184_10270 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) E4184_10275 PF00005 ABC transporter E4184_10280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4184_10280 PF00005 ABC transporter E4184_10285 PF00528 Binding-protein-dependent transport system inner membrane component E4184_10285 PF12911 N-terminal TM domain of oligopeptide transport permease C E4184_10290 PF00528 Binding-protein-dependent transport system inner membrane component E4184_10295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4184_10300 PF02954 Bacterial regulatory protein, Fis family E4184_10300 PF00158 Sigma-54 interaction domain E4184_10305 PF04012 PspA/IM30 family E4184_10310 PF06667 Phage shock protein B E4184_10320 PF04317 YcjX-like family, DUF463 E4184_10325 PF05128 Domain of unknown function (DUF697) E4184_10330 PF00351 Biopterin-dependent aromatic amino acid hydroxylase E4184_10335 PF01329 Pterin 4 alpha carbinolamine dehydratase E4184_10340 PF00158 Sigma-54 interaction domain E4184_10340 PF18024 Helix-turn-helix domain E4184_10345 PF13689 YfiR/HmsC-like E4184_10350 PF17152 Periplasmic sensor domain E4184_10350 PF00990 Diguanylate cyclase, GGDEF domain E4184_10355 PF00691 OmpA family E4184_10360 PF04055 Radical SAM superfamily E4184_10365 PF13742 OB-fold nucleic acid binding domain E4184_10365 PF02601 Exonuclease VII, large subunit E4184_10375 PF00128 Alpha amylase, catalytic domain E4184_10375 PF03423 Carbohydrate binding domain (family 25) E4184_10375 PF01373 Glycosyl hydrolase family 14 E4184_10385 PF00571 CBS domain E4184_10385 PF00478 IMP dehydrogenase / GMP reductase domain E4184_10390 PF00958 GMP synthase C terminal domain E4184_10390 PF02540 NAD synthase E4184_10390 PF00117 Glutamine amidotransferase class-I E4184_10410 PF05724 Thiopurine S-methyltransferase (TPMT) E4184_10415 PF00675 Insulinase (Peptidase family M16) E4184_10415 PF16187 Middle or third domain of peptidase_M16 E4184_10415 PF05193 Peptidase M16 inactive domain E4184_10420 PF00300 Histidine phosphatase superfamily (branch 1) E4184_10430 PF00892 EamA-like transporter family E4184_10435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4184_10440 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain E4184_10445 PF00270 DEAD/DEAH box helicase E4184_10445 PF00271 Helicase conserved C-terminal domain E4184_10445 PF03461 TRCF domain E4184_10445 PF17757 UvrB interaction domain E4184_10445 PF02559 CarD-like/TRCF domain E4184_10455 PF02687 FtsX-like permease family E4184_10455 PF12704 MacB-like periplasmic core domain E4184_10460 PF00005 ABC transporter E4184_10465 PF12704 MacB-like periplasmic core domain E4184_10465 PF02687 FtsX-like permease family E4184_10485 PF05697 Bacterial trigger factor protein (TF) E4184_10485 PF05698 Bacterial trigger factor protein (TF) C-terminus E4184_10485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4184_10490 PF00574 Clp protease E4184_10495 PF07724 AAA domain (Cdc48 subfamily) E4184_10495 PF10431 C-terminal, D2-small domain, of ClpB protein E4184_10495 PF06689 ClpX C4-type zinc finger E4184_10500 PF00004 ATPase family associated with various cellular activities (AAA) E4184_10500 PF02190 ATP-dependent protease La (LON) substrate-binding domain E4184_10500 PF05362 Lon protease (S16) C-terminal proteolytic domain E4184_10505 PF00216 Bacterial DNA-binding protein E4184_10510 PF13145 PPIC-type PPIASE domain E4184_10515 PF12848 ABC transporter E4184_10515 PF00005 ABC transporter E4184_10520 PF00474 Sodium:solute symporter family E4184_10525 PF04341 Protein of unknown function, DUF485 E4184_10540 PF00378 Enoyl-CoA hydratase/isomerase E4184_10545 PF01235 Sodium:alanine symporter family E4184_10555 PF06167 Glucose-regulated metallo-peptidase M90 E4184_10560 PF01184 GPR1/FUN34/yaaH family E4184_10570 PF00376 MerR family regulatory protein E4184_10570 PF09278 MerR, DNA binding E4184_10575 PF00682 HMGL-like E4184_10580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E4184_10580 PF02785 Biotin carboxylase C-terminal domain E4184_10580 PF00364 Biotin-requiring enzyme E4184_10580 PF00289 Biotin carboxylase, N-terminal domain E4184_10585 PF00378 Enoyl-CoA hydratase/isomerase E4184_10595 PF02770 Acyl-CoA dehydrogenase, middle domain E4184_10595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E4184_10595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E4184_10600 PF00171 Aldehyde dehydrogenase family E4184_10605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E4184_10605 PF02770 Acyl-CoA dehydrogenase, middle domain E4184_10605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E4184_10610 PF00378 Enoyl-CoA hydratase/isomerase E4184_10615 PF00378 Enoyl-CoA hydratase/isomerase E4184_10620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E4184_10620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E4184_10635 PF13520 Amino acid permease E4184_10640 PF01925 Sulfite exporter TauE/SafE E4184_10660 PF10711 Hypothetical protein (DUF2513) E4184_10675 PF02653 Branched-chain amino acid transport system / permease component E4184_10680 PF02653 Branched-chain amino acid transport system / permease component E4184_10685 PF00005 ABC transporter E4184_10695 PF01609 Transposase DDE domain E4184_10695 PF13808 DDE_Tnp_1-associated E4184_10705 PF03466 LysR substrate binding domain E4184_10705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_10720 PF02634 FdhD/NarQ family E4184_10725 PF00384 Molybdopterin oxidoreductase E4184_10735 PF00990 Diguanylate cyclase, GGDEF domain E4184_10735 PF07694 5TMR of 5TMR-LYT E4184_10740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_10740 PF03466 LysR substrate binding domain E4184_10745 PF00232 Glycosyl hydrolase family 1 E4184_10755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_10755 PF03466 LysR substrate binding domain E4184_10765 PF00933 Glycosyl hydrolase family 3 N terminal domain E4184_10770 PF01261 Xylose isomerase-like TIM barrel E4184_10775 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E4184_10775 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E4184_10780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_10780 PF03466 LysR substrate binding domain E4184_10790 PF03279 Bacterial lipid A biosynthesis acyltransferase E4184_10795 PF03279 Bacterial lipid A biosynthesis acyltransferase E4184_10805 PF05726 Pirin C-terminal cupin domain E4184_10805 PF02678 Pirin E4184_10820 PF00136 DNA polymerase family B E4184_10820 PF03104 DNA polymerase family B, exonuclease domain E4184_10850 PF01554 MatE E4184_10855 PF06786 Uncharacterised protein family (UPF0253) E4184_10860 PF00677 Lumazine binding domain E4184_10870 PF13419 Haloacid dehalogenase-like hydrolase E4184_10875 PF02222 ATP-grasp domain E4184_10880 PF00892 EamA-like transporter family E4184_10885 PF02525 Flavodoxin-like fold E4184_10905 PF13509 S1 domain E4184_10905 PF17783 CvfB-like winged helix domain E4184_10915 PF04269 Protein of unknown function, DUF440 E4184_10920 PF00912 Transglycosylase E4184_10925 PF04269 Protein of unknown function, DUF440 E4184_10930 PF03776 Septum formation topological specificity factor MinE E4184_10935 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain E4184_10940 PF05209 Septum formation inhibitor MinC, N-terminal domain E4184_10940 PF03775 Septum formation inhibitor MinC, C-terminal domain E4184_10945 PF05166 YcgL domain E4184_10950 PF13406 Transglycosylase SLT domain E4184_10955 PF03315 Serine dehydratase beta chain E4184_10955 PF03313 Serine dehydratase alpha chain E4184_10965 PF03315 Serine dehydratase beta chain E4184_10965 PF03313 Serine dehydratase alpha chain E4184_10970 PF06865 Pyrimidine/purine nucleoside phosphorylase E4184_10980 PF00376 MerR family regulatory protein E4184_10980 PF09278 MerR, DNA binding E4184_10985 PF00108 Thiolase, N-terminal domain E4184_10985 PF02803 Thiolase, C-terminal domain E4184_10990 PF08668 HDOD domain E4184_10990 PF00563 EAL domain E4184_10995 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) E4184_11000 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) E4184_11010 PF04542 Sigma-70 region 2 E4184_11010 PF08281 Sigma-70, region 4 E4184_11020 PF07584 Aerotolerance regulator N-terminal E4184_11020 PF13519 von Willebrand factor type A domain E4184_11025 PF13519 von Willebrand factor type A domain E4184_11025 PF17863 AAA lid domain E4184_11025 PF07728 AAA domain (dynein-related subfamily) E4184_11035 PF01882 Protein of unknown function DUF58 E4184_11045 PF07726 ATPase family associated with various cellular activities (AAA) E4184_11045 PF17863 AAA lid domain E4184_11050 PF00108 Thiolase, N-terminal domain E4184_11050 PF02803 Thiolase, C-terminal domain E4184_11055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E4184_11055 PF00378 Enoyl-CoA hydratase/isomerase E4184_11055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E4184_11065 PF07152 YaeQ protein E4184_11080 PF07690 Major Facilitator Superfamily E4184_11085 PF00005 ABC transporter E4184_11090 PF01032 FecCD transport family E4184_11110 PF00873 AcrB/AcrD/AcrF family E4184_11115 PF13533 Biotin-lipoyl like E4184_11120 PF00486 Transcriptional regulatory protein, C terminal E4184_11125 PF05433 Glycine zipper 2TM domain E4184_11130 PF00501 AMP-binding enzyme E4184_11130 PF13193 AMP-binding enzyme C-terminal domain E4184_11160 PF01502 Phosphoribosyl-AMP cyclohydrolase E4184_11160 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase E4184_11165 PF00977 Histidine biosynthesis protein E4184_11170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_11170 PF00512 His Kinase A (phospho-acceptor) domain E4184_11170 PF01627 Hpt domain E4184_11170 PF00072 Response regulator receiver domain E4184_11180 PF00072 Response regulator receiver domain E4184_11185 PF00977 Histidine biosynthesis protein E4184_11190 PF00117 Glutamine amidotransferase class-I E4184_11195 PF00475 Imidazoleglycerol-phosphate dehydratase E4184_11195 PF08645 Polynucleotide kinase 3 phosphatase E4184_11200 PF00155 Aminotransferase class I and II E4184_11205 PF00815 Histidinol dehydrogenase E4184_11210 PF01634 ATP phosphoribosyltransferase E4184_11210 PF08029 HisG, C-terminal domain E4184_11220 PF04851 Type III restriction enzyme, res subunit E4184_11220 PF13307 Helicase C-terminal domain E4184_11225 PF00814 Glycoprotease family E4184_11235 PF00561 alpha/beta hydrolase fold E4184_11240 PF00501 AMP-binding enzyme E4184_11240 PF13193 AMP-binding enzyme C-terminal domain E4184_11245 PF00570 HRDC domain E4184_11245 PF01612 3'-5' exonuclease E4184_11255 PF00892 EamA-like transporter family E4184_11265 PF01207 Dihydrouridine synthase (Dus) E4184_11270 PF04304 Protein of unknown function (DUF454) E4184_11275 PF00156 Phosphoribosyl transferase domain E4184_11280 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding E4184_11280 PF12170 DNA polymerase III tau subunit V interacting with alpha E4184_11280 PF12169 DNA polymerase III subunits gamma and tau domain III E4184_11285 PF02575 YbaB/EbfC DNA-binding family E4184_11290 PF00857 Isochorismatase family E4184_11295 PF05726 Pirin C-terminal cupin domain E4184_11295 PF02678 Pirin E4184_11300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_11300 PF03466 LysR substrate binding domain E4184_11310 PF00196 Bacterial regulatory proteins, luxR family E4184_11310 PF00072 Response regulator receiver domain E4184_11315 PF01743 Poly A polymerase head domain E4184_11315 PF02272 DHHA1 domain E4184_11315 PF01368 DHH family E4184_11315 PF00571 CBS domain E4184_11320 PF00271 Helicase conserved C-terminal domain E4184_11320 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold E4184_11320 PF00270 DEAD/DEAH box helicase E4184_11320 PF04408 Helicase associated domain (HA2) E4184_11320 PF11898 Domain of unknown function (DUF3418) E4184_11330 PF01386 Ribosomal L25p family E4184_11335 PF00753 Metallo-beta-lactamase superfamily E4184_11345 PF02769 AIR synthase related protein, C-terminal domain E4184_11345 PF00586 AIR synthase related protein, N-terminal domain E4184_11360 PF10672 S-adenosylmethionine-dependent methyltransferase E4184_11360 PF17785 PUA-like domain E4184_11365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_11365 PF12729 Four helix bundle sensory module for signal transduction E4184_11365 PF00672 HAMP domain E4184_11370 PF00708 Acylphosphatase E4184_11380 PF09334 tRNA synthetases class I (M) E4184_11380 PF08264 Anticodon-binding domain of tRNA E4184_11380 PF01588 Putative tRNA binding domain E4184_11385 PF10609 NUBPL iron-transfer P-loop NTPase E4184_11390 PF00485 Phosphoribulokinase / Uridine kinase family E4184_11395 PF00692 dUTPase E4184_11400 PF01384 Phosphate transporter family E4184_11405 PF00575 S1 RNA binding domain E4184_11405 PF10150 Ribonuclease E/G family E4184_11405 PF12111 Polyribonucleotide phosphorylase C terminal E4184_11410 PF01479 S4 domain E4184_11410 PF00849 RNA pseudouridylate synthase E4184_11420 PF02545 Maf-like protein E4184_11430 PF02620 Large ribosomal RNA subunit accumulation protein YceD E4184_11435 PF01783 Ribosomal L32p protein family E4184_11440 PF02504 Fatty acid synthesis protein E4184_11445 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4184_11445 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E4184_11450 PF00698 Acyl transferase domain E4184_11460 PF00550 Phosphopantetheine attachment site E4184_11465 PF00109 Beta-ketoacyl synthase, N-terminal domain E4184_11465 PF02801 Beta-ketoacyl synthase, C-terminal domain E4184_11470 PF01063 Amino-transferase class IV E4184_11480 PF02223 Thymidylate kinase E4184_11485 PF09115 DNA polymerase III, delta subunit, C terminal E4184_11490 PF01026 TatD related DNase E4184_11495 PF00589 Phage integrase family E4184_11505 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF E4184_11505 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF E4184_11505 PF01189 16S rRNA methyltransferase RsmB/F E4184_11510 PF02470 MlaD protein E4184_11515 PF04403 Paraquat-inducible protein A E4184_11525 PF07130 YebG protein E4184_11535 PF13654 AAA domain E4184_11535 PF05362 Lon protease (S16) C-terminal proteolytic domain E4184_11540 PF07977 FabA-like domain E4184_11545 PF04957 Ribosome modulation factor E4184_11565 PF10672 S-adenosylmethionine-dependent methyltransferase E4184_11565 PF01170 Putative RNA methylase family UPF0020 E4184_11565 PF02926 THUMP domain E4184_11570 PF07126 Cell-division protein ZapC E4184_11575 PF01180 Dihydroorotate dehydrogenase E4184_11580 PF05088 Bacterial NAD-glutamate dehydrogenase E4184_11590 PF01433 Peptidase family M1 domain E4184_11590 PF11940 Domain of unknown function (DUF3458) Ig-like fold E4184_11590 PF17432 Domain of unknown function (DUF3458_C) ARM repeats E4184_11595 PF17804 Tail specific protease N-terminal domain E4184_11595 PF00595 PDZ domain E4184_11595 PF11818 C-terminal domain of tail specific protease (DUF3340) E4184_11595 PF03572 Peptidase family S41 E4184_11600 PF17516 ProQ C-terminal domain E4184_11600 PF04352 ProQ/FINO family E4184_11605 PF13185 GAF domain E4184_11615 PF00115 Cytochrome C and Quinol oxidase polypeptide I E4184_11630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E4184_11630 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP E4184_11640 PF00403 Heavy-metal-associated domain E4184_11655 PF13545 Crp-like helix-turn-helix domain E4184_11655 PF00027 Cyclic nucleotide-binding domain E4184_11660 PF00582 Universal stress protein family E4184_11665 PF01171 PP-loop family E4184_11680 PF13417 Glutathione S-transferase, N-terminal domain E4184_11685 PF05025 RbsD / FucU transport protein family E4184_11690 PF00005 ABC transporter E4184_11695 PF02653 Branched-chain amino acid transport system / permease component E4184_11700 PF13407 Periplasmic binding protein domain E4184_11705 PF00294 pfkB family carbohydrate kinase E4184_11710 PF00356 Bacterial regulatory proteins, lacI family E4184_11715 PF00563 EAL domain E4184_11715 PF00990 Diguanylate cyclase, GGDEF domain E4184_11715 PF03707 Bacterial signalling protein N terminal repeat E4184_11725 PF02146 Sir2 family E4184_11740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_11740 PF00512 His Kinase A (phospho-acceptor) domain E4184_11740 PF09456 RcsC Alpha-Beta-Loop (ABL) E4184_11740 PF00072 Response regulator receiver domain E4184_11745 PF00216 Bacterial DNA-binding protein E4184_11750 PF01588 Putative tRNA binding domain E4184_11750 PF03484 tRNA synthetase B5 domain E4184_11750 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain E4184_11750 PF03483 B3/4 domain E4184_11750 PF03147 Ferredoxin-fold anticodon binding domain E4184_11755 PF01409 tRNA synthetases class II core domain (F) E4184_11755 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain E4184_11760 PF00453 Ribosomal protein L20 E4184_11765 PF01632 Ribosomal protein L35 E4184_11770 PF00707 Translation initiation factor IF-3, C-terminal domain E4184_11770 PF05198 Translation initiation factor IF-3, N-terminal domain E4184_11775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4184_11775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4184_11775 PF02824 TGS domain E4184_11775 PF03129 Anticodon binding domain E4184_11790 PF04055 Radical SAM superfamily E4184_11795 PF00521 DNA gyrase/topoisomerase IV, subunit A E4184_11795 PF03989 DNA gyrase C-terminal domain, beta-propeller E4184_11805 PF13419 Haloacid dehalogenase-like hydrolase E4184_11810 PF00317 Ribonucleotide reductase, all-alpha domain E4184_11810 PF03477 ATP cone domain E4184_11810 PF02867 Ribonucleotide reductase, barrel domain E4184_11815 PF00268 Ribonucleotide reductase, small chain E4184_11820 PF00111 2Fe-2S iron-sulfur cluster binding domain E4184_11825 PF03562 MltA specific insert domain E4184_11825 PF06725 3D domain E4184_11830 PF06945 Protein of unknown function (DUF1289) E4184_11835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E4184_11835 PF02378 Phosphotransferase system, EIIC E4184_11840 PF00294 pfkB family carbohydrate kinase E4184_11845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4184_11845 PF00381 PTS HPr component phosphorylation site E4184_11850 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E4184_11850 PF00356 Bacterial regulatory proteins, lacI family E4184_11855 PF03222 Tryptophan/tyrosine permease family E4184_11860 PF01124 MAPEG family E4184_11865 PF00270 DEAD/DEAH box helicase E4184_11865 PF00271 Helicase conserved C-terminal domain E4184_11875 PF01264 Chorismate synthase E4184_11880 PF05175 Methyltransferase small domain E4184_11885 PF01713 Smr domain E4184_11910 PF00704 Glycosyl hydrolases family 18 E4184_11910 PF08329 Chitinase A, N-terminal domain E4184_11920 PF03831 PhnA domain E4184_11920 PF08274 PhnA Zinc-Ribbon E4184_11935 PF02567 Phenazine biosynthesis-like protein E4184_11950 PF00300 Histidine phosphatase superfamily (branch 1) E4184_11970 PF03330 Lytic transglycolase E4184_11970 PF05036 Sporulation related domain E4184_11975 PF04310 MukB N-terminal E4184_11975 PF16330 MukB hinge domain E4184_11980 PF04288 MukE-like family E4184_11985 PF03882 MukF winged-helix domain E4184_11985 PF17193 MukF C-terminal domain E4184_11985 PF17192 MukF middle domain E4184_11990 PF13847 Methyltransferase domain E4184_11995 PF02698 DUF218 domain E4184_12000 PF00121 Triosephosphate isomerase E4184_12005 PF00365 Phosphofructokinase E4184_12010 PF01546 Peptidase family M20/M25/M40 E4184_12010 PF07687 Peptidase dimerisation domain E4184_12015 PF13419 Haloacid dehalogenase-like hydrolase E4184_12020 PF02789 Cytosol aminopeptidase family, N-terminal domain E4184_12020 PF00883 Cytosol aminopeptidase family, catalytic domain E4184_12070 PF11398 Protein of unknown function (DUF2813) E4184_12075 PF02311 AraC-like ligand binding domain E4184_12075 PF12833 Helix-turn-helix domain E4184_12085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_12085 PF03466 LysR substrate binding domain E4184_12090 PF01925 Sulfite exporter TauE/SafE E4184_12100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4184_12100 PF18029 Glyoxalase-like domain E4184_12105 PF07478 D-ala D-ala ligase C-terminus E4184_12105 PF01820 D-ala D-ala ligase N-terminus E4184_12115 PF00255 Glutathione peroxidase E4184_12120 PF00271 Helicase conserved C-terminal domain E4184_12120 PF00270 DEAD/DEAH box helicase E4184_12125 PF13673 Acetyltransferase (GNAT) domain E4184_12135 PF02694 Uncharacterised BCR, YnfA/UPF0060 family E4184_12145 PF01928 CYTH domain E4184_12150 PF00293 NUDIX domain E4184_12155 PF13673 Acetyltransferase (GNAT) domain E4184_12160 PF03992 Antibiotic biosynthesis monooxygenase E4184_12165 PF08543 Phosphomethylpyrimidine kinase E4184_12185 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus E4184_12185 PF00561 alpha/beta hydrolase fold E4184_12190 PF01575 MaoC like domain E4184_12220 PF00005 ABC transporter E4184_12220 PF00664 ABC transporter transmembrane region E4184_12225 PF00664 ABC transporter transmembrane region E4184_12225 PF00005 ABC transporter E4184_12230 PF00072 Response regulator receiver domain E4184_12230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_12230 PF00512 His Kinase A (phospho-acceptor) domain E4184_12230 PF01627 Hpt domain E4184_12230 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E4184_12230 PF00672 HAMP domain E4184_12235 PF00085 Thioredoxin E4184_12240 PF00939 Sodium:sulfate symporter transmembrane region E4184_12250 PF00343 Carbohydrate phosphorylase E4184_12270 PF04715 Anthranilate synthase component I, N terminal region E4184_12270 PF00425 chorismate binding enzyme E4184_12275 PF00293 NUDIX domain E4184_12280 PF03222 Tryptophan/tyrosine permease family E4184_12285 PF00375 Sodium:dicarboxylate symporter family E4184_12290 PF09382 RQC domain E4184_12290 PF16124 RecQ zinc-binding E4184_12290 PF00570 HRDC domain E4184_12290 PF00271 Helicase conserved C-terminal domain E4184_12290 PF00270 DEAD/DEAH box helicase E4184_12295 PF08298 PrkA AAA domain E4184_12295 PF06798 PrkA serine protein kinase C-terminal domain E4184_12300 PF04285 Protein of unknown function (DUF444) E4184_12305 PF04293 SpoVR like protein E4184_12310 PF07840 FadR C-terminal domain E4184_12310 PF00392 Bacterial regulatory proteins, gntR family E4184_12320 PF02600 Disulfide bond formation protein DsbB E4184_12330 PF09335 SNARE associated Golgi protein E4184_12340 PF00271 Helicase conserved C-terminal domain E4184_12340 PF04851 Type III restriction enzyme, res subunit E4184_12340 PF02151 UvrB/uvrC motif E4184_12340 PF12344 Ultra-violet resistance protein B E4184_12340 PF17757 UvrB interaction domain E4184_12355 PF06826 Predicted Permease Membrane Region E4184_12355 PF02080 TrkA-C domain E4184_12360 PF01464 Transglycosylase SLT domain E4184_12360 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4184_12380 PF13006 Insertion element 4 transposase N-terminal E4184_12380 PF01609 Transposase DDE domain E4184_12390 PF00072 Response regulator receiver domain E4184_12395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_12395 PF00989 PAS fold E4184_12395 PF17203 Single cache domain 3 E4184_12395 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain E4184_12400 PF00480 ROK family E4184_12400 PF01047 MarR family E4184_12405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_12405 PF17200 Single Cache domain 2 E4184_12405 PF00672 HAMP domain E4184_12410 PF02810 SEC-C motif E4184_12415 PF04324 BFD-like [2Fe-2S] binding domain E4184_12415 PF01266 FAD dependent oxidoreductase E4184_12420 PF00890 FAD binding domain E4184_12425 PF02754 Cysteine-rich domain E4184_12425 PF13183 4Fe-4S dicluster domain E4184_12440 PF13435 Cytochrome c554 and c-prime E4184_12440 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) E4184_12445 PF00037 4Fe-4S binding domain E4184_12445 PF13247 4Fe-4S dicluster domain E4184_12450 PF03916 Polysulphide reductase, NrfD E4184_12455 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal E4184_12455 PF01578 Cytochrome C assembly protein E4184_12460 PF08534 Redoxin E4184_12465 PF03918 Cytochrome C biogenesis protein E4184_12470 PF00768 D-alanyl-D-alanine carboxypeptidase E4184_12480 PF04244 Deoxyribodipyrimidine photo-lyase-related protein E4184_12485 PF01266 FAD dependent oxidoreductase E4184_12495 PF07969 Amidohydrolase family E4184_12500 PF00571 CBS domain E4184_12510 PF01717 Cobalamin-independent synthase, Catalytic domain E4184_12510 PF08267 Cobalamin-independent synthase, N-terminal domain E4184_12515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_12515 PF03466 LysR substrate binding domain E4184_12525 PF07715 TonB-dependent Receptor Plug Domain E4184_12525 PF00593 TonB dependent receptor E4184_12530 PF00990 Diguanylate cyclase, GGDEF domain E4184_12535 PF12833 Helix-turn-helix domain E4184_12535 PF06445 GyrI-like small molecule binding domain E4184_12540 PF00106 short chain dehydrogenase E4184_12545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_12545 PF03466 LysR substrate binding domain E4184_12550 PF13460 NAD(P)H-binding E4184_12560 PF01053 Cys/Met metabolism PLP-dependent enzyme E4184_12565 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E4184_12565 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E4184_12595 PF01609 Transposase DDE domain E4184_12595 PF05598 Transposase domain (DUF772) E4184_12660 PF13657 HipA N-terminal domain E4184_12660 PF07804 HipA-like C-terminal domain E4184_12675 PF00141 Peroxidase E4184_12690 PF10722 Putative bacterial sensory transduction regulator E4184_12700 PF00265 Thymidine kinase E4184_12710 PF00816 H-NS histone family E4184_12715 PF01923 Cobalamin adenosyltransferase E4184_12720 PF12843 Putative quorum-sensing-regulated virulence factor E4184_12725 PF04055 Radical SAM superfamily E4184_12730 PF06508 Queuosine biosynthesis protein QueC E4184_12745 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E4184_12750 PF18073 Rubredoxin metal binding domain E4184_12760 PF00216 Bacterial DNA-binding protein E4184_12765 PF00575 S1 RNA binding domain E4184_12770 PF02224 Cytidylate kinase E4184_12775 PF00925 GTP cyclohydrolase II E4184_12780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_12780 PF03466 LysR substrate binding domain E4184_12785 PF07690 Major Facilitator Superfamily E4184_12800 PF00881 Nitroreductase family E4184_12805 PF03806 AbgT putative transporter family E4184_12810 PF13188 PAS domain E4184_12810 PF03707 Bacterial signalling protein N terminal repeat E4184_12810 PF00990 Diguanylate cyclase, GGDEF domain E4184_12810 PF00563 EAL domain E4184_12820 PF03466 LysR substrate binding domain E4184_12820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_12825 PF00072 Response regulator receiver domain E4184_12835 PF01212 Beta-eliminating lyase E4184_12850 PF00248 Aldo/keto reductase family E4184_12855 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) E4184_12865 PF03411 Penicillin-insensitive murein endopeptidase E4184_12875 PF04536 TPM domain E4184_12890 PF01618 MotA/TolQ/ExbB proton channel family E4184_12895 PF13677 Membrane MotB of proton-channel complex MotA/MotB E4184_12895 PF00691 OmpA family E4184_12900 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 E4184_12905 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E4184_12910 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit E4184_12910 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit E4184_12920 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E4184_12920 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4184_12925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E4184_12925 PF00384 Molybdopterin oxidoreductase E4184_12925 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E4184_12930 PF00146 NADH dehydrogenase E4184_12935 PF12838 4Fe-4S dicluster domain E4184_12940 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 E4184_12945 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L E4184_12950 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus E4184_12950 PF00361 Proton-conducting membrane transporter E4184_12955 PF00361 Proton-conducting membrane transporter E4184_12960 PF00361 Proton-conducting membrane transporter E4184_12970 PF02769 AIR synthase related protein, C-terminal domain E4184_12970 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain E4184_12970 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal E4184_12975 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4184_12975 PF01464 Transglycosylase SLT domain E4184_12985 PF07191 zinc-ribbons E4184_12990 PF01926 50S ribosome-binding GTPase E4184_12990 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E4184_12995 PF13360 PQQ-like domain E4184_13000 PF09976 Tetratricopeptide repeat-like domain E4184_13005 PF03129 Anticodon binding domain E4184_13005 PF13393 Histidyl-tRNA synthetase E4184_13010 PF04551 GcpE protein E4184_13015 PF13464 Domain of unknown function (DUF4115) E4184_13025 PF04055 Radical SAM superfamily E4184_13030 PF00334 Nucleoside diphosphate kinase E4184_13035 PF12404 Peptidase E4184_13035 PF00883 Cytosol aminopeptidase family, catalytic domain E4184_13040 PF12404 Peptidase E4184_13040 PF00883 Cytosol aminopeptidase family, catalytic domain E4184_13045 PF00111 2Fe-2S iron-sulfur cluster binding domain E4184_13050 PF00012 Hsp70 protein E4184_13055 PF07743 HSCB C-terminal oligomerisation domain E4184_13055 PF00226 DnaJ domain E4184_13060 PF01521 Iron-sulphur cluster biosynthesis E4184_13065 PF01592 NifU-like N terminal domain E4184_13070 PF00266 Aminotransferase class-V E4184_13075 PF02082 Transcriptional regulator E4184_13080 PF00588 SpoU rRNA Methylase family E4184_13090 PF02036 SCP-2 sterol transfer family E4184_13095 PF01136 Peptidase family U32 E4184_13100 PF01136 Peptidase family U32 E4184_13105 PF07719 Tetratricopeptide repeat E4184_13105 PF13181 Tetratricopeptide repeat E4184_13110 PF00581 Rhodanese-like domain E4184_13115 PF07549 SecD/SecF GG Motif E4184_13115 PF02355 Protein export membrane protein E4184_13120 PF02355 Protein export membrane protein E4184_13120 PF13721 SecD export protein N-terminal TM region E4184_13120 PF07549 SecD/SecF GG Motif E4184_13125 PF02699 Preprotein translocase subunit E4184_13130 PF01702 Queuine tRNA-ribosyltransferase E4184_13135 PF02547 Queuosine biosynthesis protein E4184_13140 PF00571 CBS domain E4184_13145 PF00578 AhpC/TSA family E4184_13145 PF10417 C-terminal domain of 1-Cys peroxiredoxin E4184_13150 PF13192 Thioredoxin domain E4184_13150 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4184_13165 PF00990 Diguanylate cyclase, GGDEF domain E4184_13170 PF08241 Methyltransferase domain E4184_13190 PF09722 Protein of unknown function (DUF2384) E4184_13215 PF13592 Winged helix-turn helix E4184_13215 PF13358 DDE superfamily endonuclease E4184_13225 PF00665 Integrase core domain E4184_13240 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) E4184_13240 PF18766 SWI2/SNF2 ATPase E4184_13240 PF11867 Domain of unknown function (DUF3387) E4184_13250 PF13592 Winged helix-turn helix E4184_13250 PF13358 DDE superfamily endonuclease E4184_13265 PF13808 DDE_Tnp_1-associated E4184_13265 PF01609 Transposase DDE domain E4184_13275 PF12161 HsdM N-terminal domain E4184_13275 PF02384 N-6 DNA Methylase E4184_13285 PF02347 Glycine cleavage system P-protein E4184_13290 PF01597 Glycine cleavage H-protein E4184_13295 PF08669 Glycine cleavage T-protein C-terminal barrel domain E4184_13295 PF01571 Aminomethyltransferase folate-binding domain E4184_13300 PF01494 FAD binding domain E4184_13305 PF01494 FAD binding domain E4184_13310 PF03695 Uncharacterised protein family (UPF0149) E4184_13315 PF05164 Cell division protein ZapA E4184_13325 PF00356 Bacterial regulatory proteins, lacI family E4184_13330 PF00005 ABC transporter E4184_13335 PF02653 Branched-chain amino acid transport system / permease component E4184_13340 PF13407 Periplasmic binding protein domain E4184_13350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E4184_13350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E4184_13355 PF07690 Major Facilitator Superfamily E4184_13360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4184_13360 PF00005 ABC transporter E4184_13365 PF12911 N-terminal TM domain of oligopeptide transport permease C E4184_13365 PF00528 Binding-protein-dependent transport system inner membrane component E4184_13370 PF00528 Binding-protein-dependent transport system inner membrane component E4184_13380 PF02798 Glutathione S-transferase, N-terminal domain E4184_13380 PF00043 Glutathione S-transferase, C-terminal domain E4184_13385 PF13417 Glutathione S-transferase, N-terminal domain E4184_13395 PF00459 Inositol monophosphatase family E4184_13400 PF18393 MotY N-terminal domain E4184_13400 PF00691 OmpA family E4184_13405 PF00929 Exonuclease E4184_13410 PF03553 Na+/H+ antiporter family E4184_13410 PF13726 Na+-H+ antiporter family E4184_13415 PF03707 Bacterial signalling protein N terminal repeat E4184_13415 PF00563 EAL domain E4184_13415 PF13188 PAS domain E4184_13415 PF00990 Diguanylate cyclase, GGDEF domain E4184_13425 PF00271 Helicase conserved C-terminal domain E4184_13425 PF03880 DbpA RNA binding domain E4184_13425 PF00270 DEAD/DEAH box helicase E4184_13430 PF03061 Thioesterase superfamily E4184_13440 PF01565 FAD binding domain E4184_13440 PF13183 4Fe-4S dicluster domain E4184_13440 PF02913 FAD linked oxidases, C-terminal domain E4184_13455 PF13808 DDE_Tnp_1-associated E4184_13455 PF01609 Transposase DDE domain E4184_13465 PF03471 Transporter associated domain E4184_13465 PF03741 Integral membrane protein TerC family E4184_13470 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4184_13475 PF00962 Adenosine/AMP deaminase E4184_13480 PF13344 Haloacid dehalogenase-like hydrolase E4184_13490 PF13537 Glutamine amidotransferase domain E4184_13490 PF00733 Asparagine synthase E4184_13500 PF14497 Glutathione S-transferase, C-terminal domain E4184_13500 PF02798 Glutathione S-transferase, N-terminal domain E4184_13510 PF04209 homogentisate 1,2-dioxygenase E4184_13515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4184_13525 PF00849 RNA pseudouridylate synthase E4184_13530 PF00990 Diguanylate cyclase, GGDEF domain E4184_13530 PF08448 PAS fold E4184_13535 PF12729 Four helix bundle sensory module for signal transduction E4184_13535 PF00672 HAMP domain E4184_13535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_13540 PF13193 AMP-binding enzyme C-terminal domain E4184_13540 PF00501 AMP-binding enzyme E4184_13565 PF07044 Protein of unknown function (DUF1329) E4184_13575 PF01144 Coenzyme A transferase E4184_13580 PF01144 Coenzyme A transferase E4184_13585 PF03601 Conserved hypothetical protein 698 E4184_13595 PF07690 Major Facilitator Superfamily E4184_13600 PF05853 beta-keto acid cleavage enzyme E4184_13605 PF02668 Taurine catabolism dioxygenase TauD, TfdA family E4184_13610 PF08240 Alcohol dehydrogenase GroES-like domain E4184_13610 PF00107 Zinc-binding dehydrogenase E4184_13620 PF00285 Citrate synthase, C-terminal domain E4184_13625 PF00694 Aconitase C-terminal domain E4184_13625 PF00330 Aconitase family (aconitate hydratase) E4184_13630 PF04303 PrpF protein E4184_13640 PF01027 Inhibitor of apoptosis-promoting Bax1 E4184_13650 PF12805 FUSC-like inner membrane protein yccS E4184_13655 PF04358 DsrC like protein E4184_13660 PF05036 Sporulation related domain E4184_13665 PF02875 Mur ligase family, glutamate ligase domain E4184_13665 PF08245 Mur ligase middle domain E4184_13670 PF17848 Acetyl-coA carboxylase zinc finger domain E4184_13670 PF01039 Carboxyl transferase domain E4184_13675 PF01416 tRNA pseudouridine synthase E4184_13685 PF01118 Semialdehyde dehydrogenase, NAD binding domain E4184_13685 PF02774 Semialdehyde dehydrogenase, dimerisation domain E4184_13690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4184_13690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4184_13690 PF11890 Domain of unknown function (DUF3410) E4184_13695 PF01569 PAP2 superfamily E4184_13700 PF03180 NLPA lipoprotein E4184_13715 PF00005 ABC transporter E4184_13720 PF01483 Proprotein convertase P-domain E4184_13720 PF00082 Subtilase family E4184_13730 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E4184_13730 PF00391 PEP-utilising enzyme, mobile domain E4184_13730 PF02896 PEP-utilising enzyme, TIM barrel domain E4184_13735 PF03618 Kinase/pyrophosphorylase E4184_13745 PF00324 Amino acid permease E4184_13785 PF03412 Peptidase C39 family E4184_13785 PF00005 ABC transporter E4184_13785 PF00664 ABC transporter transmembrane region E4184_13790 PF04055 Radical SAM superfamily E4184_13790 PF16199 Radical_SAM C-terminal domain E4184_13795 PF00310 Glutamine amidotransferases class-II E4184_13795 PF01493 GXGXG motif E4184_13795 PF04898 Glutamate synthase central domain E4184_13795 PF01645 Conserved region in glutamate synthase E4184_13800 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4184_13800 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4184_13815 PF00271 Helicase conserved C-terminal domain E4184_13815 PF00270 DEAD/DEAH box helicase E4184_13830 PF08378 Nuclease-related domain E4184_13835 PF07759 Protein of unknown function (DUF1615) E4184_13840 PF17158 Membrane-associated sensor, integral membrane domain E4184_13840 PF00990 Diguanylate cyclase, GGDEF domain E4184_13845 PF08502 LeuA allosteric (dimerisation) domain E4184_13845 PF00682 HMGL-like E4184_13850 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain E4184_13850 PF02142 MGS-like domain E4184_13850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E4184_13855 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain E4184_13855 PF00117 Glutamine amidotransferase class-I E4184_13860 PF05173 Dihydrodipicolinate reductase, C-terminus E4184_13860 PF01113 Dihydrodipicolinate reductase, N-terminus E4184_13870 PF01812 5-formyltetrahydrofolate cyclo-ligase family E4184_13875 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) E4184_13880 PF01842 ACT domain E4184_13880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4184_13880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4184_13885 PF01219 Prokaryotic diacylglycerol kinase E4184_13890 PF00793 DAHP synthetase I family E4184_13900 PF01032 FecCD transport family E4184_13915 PF00437 Type II/IV secretion system protein E4184_13920 PF00483 Nucleotidyl transferase E4184_13930 PF07664 Ferrous iron transport protein B C terminus E4184_13930 PF02421 Ferrous iron transport protein B E4184_13930 PF07670 Nucleoside recognition E4184_13940 PF01253 Translation initiation factor SUI1 E4184_13945 PF01169 Uncharacterized protein family UPF0016 E4184_13980 PF00990 Diguanylate cyclase, GGDEF domain E4184_13980 PF13185 GAF domain E4184_13985 PF13592 Winged helix-turn helix E4184_13985 PF13358 DDE superfamily endonuclease E4184_14015 PF00149 Calcineurin-like phosphoesterase E4184_14020 PF04226 Transglycosylase associated protein E4184_14025 PF13417 Glutathione S-transferase, N-terminal domain E4184_14025 PF00043 Glutathione S-transferase, C-terminal domain E4184_14030 PF02661 Fic/DOC family E4184_14030 PF13784 Fic/DOC family N-terminal E4184_14045 PF13737 Transposase DDE domain E4184_14065 PF13808 DDE_Tnp_1-associated E4184_14065 PF01609 Transposase DDE domain E4184_14080 PF01609 Transposase DDE domain E4184_14080 PF05598 Transposase domain (DUF772) E4184_14120 PF00589 Phage integrase family E4184_14140 PF01066 CDP-alcohol phosphatidyltransferase E4184_14145 PF01541 GIY-YIG catalytic domain E4184_14145 PF02151 UvrB/uvrC motif E4184_14145 PF08459 UvrC Helix-hairpin-helix N-terminal E4184_14150 PF00196 Bacterial regulatory proteins, luxR family E4184_14150 PF00072 Response regulator receiver domain E4184_14155 PF02348 Cytidylyltransferase E4184_14160 PF03966 Trm112p-like protein E4184_14165 PF02606 Tetraacyldisaccharide-1-P 4'-kinase E4184_14170 PF00005 ABC transporter E4184_14170 PF00664 ABC transporter transmembrane region E4184_14175 PF03772 Competence protein E4184_14175 PF00753 Metallo-beta-lactamase superfamily E4184_14190 PF05872 Bacterial protein of unknown function (DUF853) E4184_14195 PF00155 Aminotransferase class I and II E4184_14205 PF13609 Gram-negative porin E4184_14210 PF13307 Helicase C-terminal domain E4184_14210 PF06733 DEAD_2 E4184_14220 PF00850 Histone deacetylase domain E4184_14225 PF07690 Major Facilitator Superfamily E4184_14230 PF01926 50S ribosome-binding GTPase E4184_14240 PF00245 Alkaline phosphatase E4184_14260 PF14760 Rnk N-terminus E4184_14260 PF01272 Transcription elongation factor, GreA/GreB, C-term E4184_14265 PF00072 Response regulator receiver domain E4184_14265 PF00196 Bacterial regulatory proteins, luxR family E4184_14270 PF05231 MASE1 E4184_14270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_14270 PF07730 Histidine kinase E4184_14275 PF07690 Major Facilitator Superfamily E4184_14285 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4184_14290 PF00528 Binding-protein-dependent transport system inner membrane component E4184_14295 PF00005 ABC transporter E4184_14300 PF04116 Fatty acid hydroxylase superfamily E4184_14305 PF13520 Amino acid permease E4184_14320 PF03471 Transporter associated domain E4184_14320 PF01595 Cyclin M transmembrane N-terminal domain E4184_14320 PF00571 CBS domain E4184_14325 PF01895 PhoU domain E4184_14335 PF00528 Binding-protein-dependent transport system inner membrane component E4184_14340 PF00528 Binding-protein-dependent transport system inner membrane component E4184_14345 PF14437 MafB19-like deaminase E4184_14360 PF01274 Malate synthase E4184_14365 PF00463 Isocitrate lyase family E4184_14370 PF00308 Bacterial dnaA protein E4184_14385 PF02769 AIR synthase related protein, C-terminal domain E4184_14385 PF00586 AIR synthase related protein, N-terminal domain E4184_14390 PF00551 Formyl transferase E4184_14395 PF01784 NIF3 (NGG1p interacting factor 3) E4184_14400 PF00072 Response regulator receiver domain E4184_14400 PF00158 Sigma-54 interaction domain E4184_14400 PF02954 Bacterial regulatory protein, Fis family E4184_14405 PF00512 His Kinase A (phospho-acceptor) domain E4184_14405 PF00989 PAS fold E4184_14405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_14410 PF02954 Bacterial regulatory protein, Fis family E4184_14410 PF00158 Sigma-54 interaction domain E4184_14410 PF06490 Flagellar regulatory protein FleQ E4184_14420 PF01842 ACT domain E4184_14425 PF13089 Polyphosphate kinase N-terminal domain E4184_14425 PF02503 Polyphosphate kinase middle domain E4184_14425 PF17941 Polyphosphate kinase C-terminal domain 1 E4184_14425 PF13090 Polyphosphate kinase C-terminal domain 2 E4184_14430 PF02541 Ppx/GppA phosphatase family E4184_14435 PF03448 MgtE intracellular N domain E4184_14435 PF01769 Divalent cation transporter E4184_14435 PF00571 CBS domain E4184_14440 PF12323 Helix-turn-helix domain E4184_14460 PF10135 Rod binding protein E4184_14460 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E4184_14465 PF02119 Flagellar P-ring protein E4184_14470 PF02107 Flagellar L-ring protein E4184_14475 PF00460 Flagella basal body rod protein E4184_14475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4184_14480 PF00460 Flagella basal body rod protein E4184_14480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4184_14485 PF07559 Flagellar basal body protein FlaE E4184_14485 PF00460 Flagella basal body rod protein E4184_14485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4184_14495 PF00460 Flagella basal body rod protein E4184_14495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4184_14500 PF00460 Flagella basal body rod protein E4184_14505 PF01739 CheR methyltransferase, SAM binding domain E4184_14505 PF03705 CheR methyltransferase, all-alpha domain E4184_14510 PF01584 CheW-like domain E4184_14510 PF00072 Response regulator receiver domain E4184_14515 PF13144 Chaperone for flagella basal body P-ring formation E4184_14530 PF12850 Calcineurin-like phosphoesterase superfamily domain E4184_14535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4184_14545 PF00849 RNA pseudouridylate synthase E4184_14545 PF01479 S4 domain E4184_14550 PF01966 HD domain E4184_14550 PF11871 Domain of unknown function (DUF3391) E4184_14560 PF00892 EamA-like transporter family E4184_14565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4184_14590 PF00313 'Cold-shock' DNA-binding domain E4184_14595 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E4184_14595 PF02817 e3 binding domain E4184_14595 PF00364 Biotin-requiring enzyme E4184_14600 PF02779 Transketolase, pyrimidine binding domain E4184_14600 PF02780 Transketolase, C-terminal domain E4184_14605 PF00676 Dehydrogenase E1 component E4184_14610 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family E4184_14620 PF05472 DNA replication terminus site-binding protein (Ter protein) E4184_14625 PF00271 Helicase conserved C-terminal domain E4184_14625 PF00176 SNF2 family N-terminal domain E4184_14625 PF04434 SWIM zinc finger E4184_14630 PF04337 Protein of unknown function, DUF480 E4184_14650 PF05598 Transposase domain (DUF772) E4184_14650 PF01609 Transposase DDE domain E4184_14655 PF02719 Polysaccharide biosynthesis protein E4184_14660 PF00953 Glycosyl transferase family 4 E4184_14665 PF01370 NAD dependent epimerase/dehydratase family E4184_14680 PF03600 Citrate transporter E4184_14680 PF02080 TrkA-C domain E4184_14685 PF00009 Elongation factor Tu GTP binding domain E4184_14690 PF01507 Phosphoadenosine phosphosulfate reductase family E4184_14705 PF02350 UDP-N-acetylglucosamine 2-epimerase E4184_14710 PF00535 Glycosyl transferase family 2 E4184_14715 PF00005 ABC transporter E4184_14725 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase E4184_14730 PF00483 Nucleotidyl transferase E4184_14735 PF04321 RmlD substrate binding domain E4184_14740 PF16363 GDP-mannose 4,6 dehydratase E4184_14745 PF00486 Transcriptional regulatory protein, C terminal E4184_14745 PF00072 Response regulator receiver domain E4184_14750 PF08918 PhoQ Sensor E4184_14750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_14755 PF02685 Glucokinase E4184_14760 PF01418 Helix-turn-helix domain, rpiR family E4184_14760 PF01380 SIS domain E4184_14765 PF00224 Pyruvate kinase, barrel domain E4184_14765 PF02887 Pyruvate kinase, alpha/beta domain E4184_14775 PF00873 AcrB/AcrD/AcrF family E4184_14780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E4184_14780 PF02770 Acyl-CoA dehydrogenase, middle domain E4184_14780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E4184_14780 PF09317 Domain of unknown function (DUF1974) E4184_14785 PF00440 Bacterial regulatory proteins, tetR family E4184_14805 PF09588 YqaJ-like viral recombinase domain E4184_14825 PF04002 RadC-like JAB domain E4184_14845 PF13808 DDE_Tnp_1-associated E4184_14845 PF01609 Transposase DDE domain E4184_14875 PF01609 Transposase DDE domain E4184_14885 PF01609 Transposase DDE domain E4184_14890 PF00107 Zinc-binding dehydrogenase E4184_14890 PF08240 Alcohol dehydrogenase GroES-like domain E4184_14940 PF02798 Glutathione S-transferase, N-terminal domain E4184_14940 PF00043 Glutathione S-transferase, C-terminal domain E4184_14945 PF01625 Peptide methionine sulfoxide reductase E4184_14950 PF01641 SelR domain E4184_14955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_14955 PF03466 LysR substrate binding domain E4184_14965 PF01625 Peptide methionine sulfoxide reductase E4184_14980 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) E4184_15000 PF01047 MarR family E4184_15005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_15005 PF03466 LysR substrate binding domain E4184_15015 PF03743 Bacterial conjugation TrbI-like protein E4184_15025 PF13148 Protein of unknown function (DUF3987) E4184_15035 PF13356 Arm DNA-binding domain E4184_15035 PF00589 Phage integrase family E4184_15040 PF01609 Transposase DDE domain E4184_15040 PF13808 DDE_Tnp_1-associated E4184_15045 PF00589 Phage integrase family E4184_15045 PF13356 Arm DNA-binding domain E4184_15060 PF02321 Outer membrane efflux protein E4184_15065 PF00873 AcrB/AcrD/AcrF family E4184_15070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4184_15070 PF00529 HlyD membrane-fusion protein of T1SS E4184_15075 PF08361 MAATS-type transcriptional repressor, C-terminal region E4184_15075 PF00440 Bacterial regulatory proteins, tetR family E4184_15095 PF01479 S4 domain E4184_15095 PF00849 RNA pseudouridylate synthase E4184_15100 PF04079 Segregation and condensation complex subunit ScpB E4184_15105 PF02616 Segregation and condensation protein ScpA E4184_15110 PF01300 Telomere recombination E4184_15115 PF02811 PHP domain E4184_15125 PF04715 Anthranilate synthase component I, N terminal region E4184_15125 PF00425 chorismate binding enzyme E4184_15130 PF02885 Glycosyl transferase family, helical bundle domain E4184_15130 PF00591 Glycosyl transferase family, a/b domain E4184_15130 PF00117 Glutamine amidotransferase class-I E4184_15135 PF02885 Glycosyl transferase family, helical bundle domain E4184_15135 PF00591 Glycosyl transferase family, a/b domain E4184_15140 PF00218 Indole-3-glycerol phosphate synthase E4184_15140 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase E4184_15145 PF00291 Pyridoxal-phosphate dependent enzyme E4184_15150 PF00290 Tryptophan synthase alpha chain E4184_15185 PF04307 LexA-binding, inner membrane-associated putative hydrolase E4184_15190 PF01381 Helix-turn-helix E4184_15195 PF07804 HipA-like C-terminal domain E4184_15195 PF13657 HipA N-terminal domain E4184_15215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_15215 PF03466 LysR substrate binding domain E4184_15225 PF07237 Protein of unknown function (DUF1428) E4184_15230 PF07690 Major Facilitator Superfamily E4184_15240 PF01040 UbiA prenyltransferase family E4184_15245 PF03626 Prokaryotic Cytochrome C oxidase subunit IV E4184_15250 PF00510 Cytochrome c oxidase subunit III E4184_15255 PF00115 Cytochrome C and Quinol oxidase polypeptide I E4184_15260 PF06481 COX Aromatic Rich Motif E4184_15260 PF00116 Cytochrome C oxidase subunit II, periplasmic domain E4184_15265 PF02627 Carboxymuconolactone decarboxylase family E4184_15270 PF03466 LysR substrate binding domain E4184_15270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_15280 PF01156 Inosine-uridine preferring nucleoside hydrolase E4184_15290 PF00127 Copper binding proteins, plastocyanin/azurin family E4184_15295 PF02424 ApbE family E4184_15300 PF00011 Hsp20/alpha crystallin family E4184_15315 PF03372 Endonuclease/Exonuclease/phosphatase family E4184_15325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4184_15325 PF00529 HlyD membrane-fusion protein of T1SS E4184_15330 PF00873 AcrB/AcrD/AcrF family E4184_15345 PF03099 Biotin/lipoate A/B protein ligase family E4184_15345 PF10437 Bacterial lipoate protein ligase C-terminus E4184_15350 PF12704 MacB-like periplasmic core domain E4184_15350 PF02687 FtsX-like permease family E4184_15350 PF00005 ABC transporter E4184_15355 PF12704 MacB-like periplasmic core domain E4184_15355 PF00005 ABC transporter E4184_15355 PF02687 FtsX-like permease family E4184_15360 PF00005 ABC transporter E4184_15360 PF12704 MacB-like periplasmic core domain E4184_15360 PF02687 FtsX-like permease family E4184_15365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4184_15365 PF00529 HlyD membrane-fusion protein of T1SS E4184_15370 PF00873 AcrB/AcrD/AcrF family E4184_15385 PF04143 Sulphur transport E4184_15390 PF01022 Bacterial regulatory protein, arsR family E4184_15405 PF02308 MgtC family E4184_15410 PF13407 Periplasmic binding protein domain E4184_15410 PF00356 Bacterial regulatory proteins, lacI family E4184_15415 PF00251 Glycosyl hydrolases family 32 N-terminal domain E4184_15415 PF08244 Glycosyl hydrolases family 32 C terminal E4184_15420 PF00367 phosphotransferase system, EIIB E4184_15420 PF02378 Phosphotransferase system, EIIC E4184_15425 PF00294 pfkB family carbohydrate kinase E4184_15430 PF02264 LamB porin E4184_15430 PF11471 Maltoporin periplasmic N-terminal extension E4184_15435 PF00226 DnaJ domain E4184_15435 PF01556 DnaJ C terminal domain E4184_15435 PF00684 DnaJ central domain E4184_15440 PF00012 Hsp70 protein E4184_15445 PF01025 GrpE E4184_15450 PF01513 ATP-NAD kinase E4184_15455 PF00990 Diguanylate cyclase, GGDEF domain E4184_15455 PF17158 Membrane-associated sensor, integral membrane domain E4184_15460 PF02463 RecF/RecN/SMC N terminal domain E4184_15465 PF02833 DHHA2 domain E4184_15465 PF01368 DHH family E4184_15475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4184_15480 PF12704 MacB-like periplasmic core domain E4184_15480 PF02687 FtsX-like permease family E4184_15480 PF00005 ABC transporter E4184_15485 PF02321 Outer membrane efflux protein E4184_15490 PF04954 Siderophore-interacting protein E4184_15490 PF08021 Siderophore-interacting FAD-binding domain E4184_15495 PF00793 DAHP synthetase I family E4184_15500 PF00816 H-NS histone family E4184_15505 PF03466 LysR substrate binding domain E4184_15505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_15510 PF02447 GntP family permease E4184_15515 PF00291 Pyridoxal-phosphate dependent enzyme E4184_15525 PF00180 Isocitrate/isopropylmalate dehydrogenase E4184_15530 PF12833 Helix-turn-helix domain E4184_15535 PF01238 Phosphomannose isomerase type I E4184_15555 PF02368 Bacterial Ig-like domain (group 2) E4184_15555 PF11999 Protein of unknown function (DUF3494) E4184_15565 PF00083 Sugar (and other) transporter E4184_15570 PF13181 Tetratricopeptide repeat E4184_15570 PF17128 Domain of unknown function (DUF5107) E4184_15575 PF00480 ROK family E4184_15585 PF05598 Transposase domain (DUF772) E4184_15585 PF01609 Transposase DDE domain E4184_15595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4184_15595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E4184_15595 PF02378 Phosphotransferase system, EIIC E4184_15600 PF07690 Major Facilitator Superfamily E4184_15605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E4184_15615 PF00849 RNA pseudouridylate synthase E4184_15620 PF00293 NUDIX domain E4184_15630 PF04356 Protein of unknown function (DUF489) E4184_15635 PF08328 Adenylosuccinate lyase C-terminal E4184_15635 PF00206 Lyase E4184_15640 PF08007 Cupin superfamily protein E4184_15645 PF00224 Pyruvate kinase, barrel domain E4184_15645 PF02887 Pyruvate kinase, alpha/beta domain E4184_15650 PF12795 Mechanosensitive ion channel porin domain E4184_15650 PF12794 Mechanosensitive ion channel inner membrane domain 1 E4184_15650 PF00924 Mechanosensitive ion channel E4184_15655 PF13356 Arm DNA-binding domain E4184_15655 PF00589 Phage integrase family E4184_15680 PF13362 Toprim domain E4184_15680 PF18818 Metallopeptidase superfamily domain E4184_15680 PF08401 Domain of unknown function (DUF1738) E4184_15710 PF01609 Transposase DDE domain E4184_15710 PF13006 Insertion element 4 transposase N-terminal E4184_15715 PF02661 Fic/DOC family E4184_15715 PF13784 Fic/DOC family N-terminal E4184_15720 PF01810 LysE type translocator E4184_15725 PF10282 Lactonase, 7-bladed beta-propeller E4184_15740 PF00860 Permease family E4184_15750 PF00390 Malic enzyme, N-terminal domain E4184_15750 PF03949 Malic enzyme, NAD binding domain E4184_15755 PF12804 MobA-like NTP transferase domain E4184_15760 PF03205 Molybdopterin guanine dinucleotide synthesis protein B E4184_15765 PF04632 Fusaric acid resistance protein family E4184_15780 PF08447 PAS fold E4184_15780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_15780 PF13426 PAS domain E4184_15800 PF05114 Protein of unknown function (DUF692) E4184_15815 PF02028 BCCT, betaine/carnitine/choline family transporter E4184_15820 PF01609 Transposase DDE domain E4184_15820 PF13006 Insertion element 4 transposase N-terminal E4184_15845 PF13474 SnoaL-like domain E4184_15850 PF14821 Threonine synthase N terminus E4184_15850 PF00291 Pyridoxal-phosphate dependent enzyme E4184_15855 PF00288 GHMP kinases N terminal domain E4184_15855 PF08544 GHMP kinases C terminal E4184_15860 PF03447 Homoserine dehydrogenase, NAD binding domain E4184_15860 PF00696 Amino acid kinase family E4184_15860 PF13840 ACT domain E4184_15860 PF00742 Homoserine dehydrogenase E4184_15860 PF01842 ACT domain E4184_15870 PF00588 SpoU rRNA Methylase family E4184_15875 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) E4184_15890 PF03737 Aldolase/RraA E4184_15900 PF00072 Response regulator receiver domain E4184_15900 PF00486 Transcriptional regulatory protein, C terminal E4184_15915 PF00664 ABC transporter transmembrane region E4184_15915 PF00005 ABC transporter E4184_15920 PF00664 ABC transporter transmembrane region E4184_15920 PF00005 ABC transporter E4184_15935 PF16363 GDP-mannose 4,6 dehydratase E4184_15940 PF01980 tRNA-methyltransferase O E4184_15940 PF18389 TrmO C-terminal domain E4184_15945 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4184_15945 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E4184_15955 PF01434 Peptidase family M41 E4184_15955 PF00004 ATPase family associated with various cellular activities (AAA) E4184_15955 PF17862 AAA+ lid domain E4184_15960 PF00291 Pyridoxal-phosphate dependent enzyme E4184_15965 PF00381 PTS HPr component phosphorylation site E4184_15970 PF05524 PEP-utilising enzyme, N-terminal E4184_15970 PF00391 PEP-utilising enzyme, mobile domain E4184_15970 PF02896 PEP-utilising enzyme, TIM barrel domain E4184_15975 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E4184_15980 PF01292 Prokaryotic cytochrome b561 E4184_15990 PF00149 Calcineurin-like phosphoesterase E4184_15990 PF12320 Type 5 capsule protein repressor C-terminal domain E4184_15995 PF13673 Acetyltransferase (GNAT) domain E4184_16000 PF04381 Putative exonuclease, RdgC E4184_16005 PF13472 GDSL-like Lipase/Acylhydrolase family E4184_16015 PF00999 Sodium/hydrogen exchanger family E4184_16015 PF02254 TrkA-N domain E4184_16020 PF02954 Bacterial regulatory protein, Fis family E4184_16020 PF00072 Response regulator receiver domain E4184_16020 PF00158 Sigma-54 interaction domain E4184_16050 PF01266 FAD dependent oxidoreductase E4184_16055 PF01381 Helix-turn-helix E4184_16055 PF07883 Cupin domain E4184_16060 PF00171 Aldehyde dehydrogenase family E4184_16065 PF00202 Aminotransferase class-III E4184_16070 PF00324 Amino acid permease E4184_16075 PF13520 Amino acid permease E4184_16085 PF02690 Na+/Pi-cotransporter E4184_16090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4184_16090 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E4184_16095 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E4184_16100 PF00512 His Kinase A (phospho-acceptor) domain E4184_16100 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4184_16100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_16100 PF00072 Response regulator receiver domain E4184_16100 PF01627 Hpt domain E4184_16100 PF00989 PAS fold E4184_16105 PF10725 Protein of unknown function (DUF2517) E4184_16125 PF00072 Response regulator receiver domain E4184_16125 PF09308 LuxQ, periplasmic E4184_16125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_16125 PF00512 His Kinase A (phospho-acceptor) domain E4184_16135 PF03466 LysR substrate binding domain E4184_16135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_16140 PF02129 X-Pro dipeptidyl-peptidase (S15 family) E4184_16150 PF07690 Major Facilitator Superfamily E4184_16170 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E4184_16175 PF02416 mttA/Hcf106 family E4184_16180 PF05573 NosL E4184_16185 PF12679 ABC-2 family transporter protein E4184_16190 PF00005 ABC transporter E4184_16195 PF05048 Periplasmic copper-binding protein (NosD) E4184_16200 PF18764 Nitrous oxide reductase propeller repeat E4184_16200 PF18793 Nitrous oxide reductase propeller repeat 2 E4184_16200 PF00116 Cytochrome C oxidase subunit II, periplasmic domain E4184_16205 PF04205 FMN-binding domain E4184_16205 PF12801 4Fe-4S binding domain E4184_16210 PF01380 SIS domain E4184_16210 PF01418 Helix-turn-helix domain, rpiR family E4184_16220 PF17969 L,D-transpeptidase C-terminal domain E4184_16220 PF01476 LysM domain E4184_16220 PF03734 L,D-transpeptidase catalytic domain E4184_16230 PF01575 MaoC like domain E4184_16235 PF05971 RNA methyltransferase E4184_16240 PF00877 NlpC/P60 family E4184_16245 PF01648 4'-phosphopantetheinyl transferase superfamily E4184_16250 PF00085 Thioredoxin E4184_16260 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase E4184_16265 PF00551 Formyl transferase E4184_16265 PF01842 ACT domain E4184_16275 PF13091 PLD-like domain E4184_16275 PF13396 Phospholipase_D-nuclease N-terminal E4184_16290 PF10145 Phage-related minor tail protein E4184_16290 PF01464 Transglycosylase SLT domain E4184_16290 PF01551 Peptidase family M23 E4184_16295 PF00230 Major intrinsic protein E4184_16300 PF02075 Crossover junction endodeoxyribonuclease RuvC E4184_16305 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E4184_16325 PF05598 Transposase domain (DUF772) E4184_16325 PF01609 Transposase DDE domain E4184_16330 PF08497 Radical SAM N-terminal E4184_16330 PF11842 Domain of unknown function (DUF3362) E4184_16330 PF04055 Radical SAM superfamily E4184_16335 PF00873 AcrB/AcrD/AcrF family E4184_16345 PF00990 Diguanylate cyclase, GGDEF domain E4184_16345 PF05230 MASE2 domain E4184_16350 PF01734 Patatin-like phospholipase E4184_16355 PF00209 Sodium:neurotransmitter symporter family E4184_16370 PF01389 OmpA-like transmembrane domain E4184_16370 PF00691 OmpA family E4184_16375 PF01389 OmpA-like transmembrane domain E4184_16375 PF00691 OmpA family E4184_16380 PF00691 OmpA family E4184_16380 PF01389 OmpA-like transmembrane domain E4184_16385 PF00390 Malic enzyme, N-terminal domain E4184_16385 PF03949 Malic enzyme, NAD binding domain E4184_16390 PF12833 Helix-turn-helix domain E4184_16395 PF01554 MatE E4184_16405 PF10692 Protein of unknown function (DUF2498) E4184_16410 PF00990 Diguanylate cyclase, GGDEF domain E4184_16410 PF00072 Response regulator receiver domain E4184_16415 PF00860 Permease family E4184_16420 PF13006 Insertion element 4 transposase N-terminal E4184_16420 PF01609 Transposase DDE domain E4184_16430 PF01235 Sodium:alanine symporter family E4184_16435 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E4184_16435 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E4184_16440 PF01699 Sodium/calcium exchanger protein E4184_16445 PF08534 Redoxin E4184_16450 PF00293 NUDIX domain E4184_16460 PF00005 ABC transporter E4184_16465 PF00528 Binding-protein-dependent transport system inner membrane component E4184_16470 PF00528 Binding-protein-dependent transport system inner membrane component E4184_16475 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4184_16490 PF00005 ABC transporter E4184_16495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4184_16495 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E4184_16510 PF03932 CutC family E4184_16515 PF00480 ROK family E4184_16525 PF01435 Peptidase family M48 E4184_16530 PF12849 PBP superfamily domain E4184_16540 PF00486 Transcriptional regulatory protein, C terminal E4184_16540 PF00072 Response regulator receiver domain E4184_16545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4184_16550 PF17158 Membrane-associated sensor, integral membrane domain E4184_16550 PF00990 Diguanylate cyclase, GGDEF domain E4184_16555 PF01590 GAF domain E4184_16555 PF00158 Sigma-54 interaction domain E4184_16555 PF02954 Bacterial regulatory protein, Fis family E4184_16560 PF00171 Aldehyde dehydrogenase family E4184_16570 PF00892 EamA-like transporter family E4184_16575 PF00072 Response regulator receiver domain E4184_16575 PF12431 Transcriptional regulator E4184_16580 PF17203 Single cache domain 3 E4184_16580 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain E4184_16580 PF00989 PAS fold E4184_16580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_16585 PF00390 Malic enzyme, N-terminal domain E4184_16585 PF03949 Malic enzyme, NAD binding domain E4184_16590 PF03390 2-hydroxycarboxylate transporter family E4184_16595 PF01047 MarR family E4184_16600 PF00529 HlyD membrane-fusion protein of T1SS E4184_16600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4184_16615 PF13006 Insertion element 4 transposase N-terminal E4184_16615 PF01609 Transposase DDE domain E4184_16625 PF01679 Proteolipid membrane potential modulator E4184_16635 PF03477 ATP cone domain E4184_16635 PF13597 Anaerobic ribonucleoside-triphosphate reductase E4184_16645 PF03120 NAD-dependent DNA ligase OB-fold domain E4184_16645 PF00533 BRCA1 C Terminus (BRCT) domain E4184_16645 PF12826 Helix-hairpin-helix motif E4184_16645 PF01653 NAD-dependent DNA ligase adenylation domain E4184_16645 PF03119 NAD-dependent DNA ligase C4 zinc finger domain E4184_16650 PF04354 ZipA, C-terminal FtsZ-binding domain E4184_16655 PF02463 RecF/RecN/SMC N terminal domain E4184_16655 PF06470 SMC proteins Flexible Hinge Domain E4184_16665 PF03458 UPF0126 domain E4184_16675 PF05951 Bacterial protein of unknown function (DUF882) E4184_16680 PF03734 L,D-transpeptidase catalytic domain E4184_16680 PF01471 Putative peptidoglycan binding domain E4184_16695 PF00535 Glycosyl transferase family 2 E4184_16710 PF00128 Alpha amylase, catalytic domain E4184_16720 PF00196 Bacterial regulatory proteins, luxR family E4184_16720 PF00072 Response regulator receiver domain E4184_16745 PF02254 TrkA-N domain E4184_16745 PF00999 Sodium/hydrogen exchanger family E4184_16745 PF02080 TrkA-C domain E4184_16750 PF00990 Diguanylate cyclase, GGDEF domain E4184_16755 PF01171 PP-loop family E4184_16755 PF09179 TilS substrate binding domain E4184_16755 PF11734 TilS substrate C-terminal domain E4184_16760 PF05649 Peptidase family M13 E4184_16760 PF01431 Peptidase family M13 E4184_16775 PF16326 ABC transporter C-terminal domain E4184_16775 PF12848 ABC transporter E4184_16775 PF00005 ABC transporter E4184_16785 PF13520 Amino acid permease E4184_16795 PF07282 Putative transposase DNA-binding domain E4184_16795 PF01385 Probable transposase E4184_16795 PF12323 Helix-turn-helix domain E4184_16810 PF03466 LysR substrate binding domain E4184_16810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_16820 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit E4184_16825 PF14579 Helix-hairpin-helix motif E4184_16825 PF02811 PHP domain E4184_16825 PF01336 OB-fold nucleic acid binding domain E4184_16825 PF07733 Bacterial DNA polymerase III alpha NTPase domain E4184_16825 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E4184_16830 PF01351 Ribonuclease HII E4184_16835 PF02684 Lipid-A-disaccharide synthetase E4184_16840 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 E4184_16840 PF00132 Bacterial transferase hexapeptide (six repeats) E4184_16845 PF07977 FabA-like domain E4184_16850 PF00132 Bacterial transferase hexapeptide (six repeats) E4184_16850 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD E4184_16855 PF03938 Outer membrane protein (OmpH-like) E4184_16860 PF01103 Surface antigen E4184_16860 PF07244 Surface antigen variable number repeat E4184_16865 PF17820 PDZ domain E4184_16865 PF02163 Peptidase family M50 E4184_16870 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain E4184_16870 PF13288 DXP reductoisomerase C-terminal domain E4184_16870 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase E4184_16880 PF01255 Putative undecaprenyl diphosphate synthase E4184_16885 PF01765 Ribosome recycling factor E4184_16890 PF00696 Amino acid kinase family E4184_16895 PF00889 Elongation factor TS E4184_16900 PF00318 Ribosomal protein S2 E4184_16905 PF00557 Metallopeptidase family M24 E4184_16910 PF01842 ACT domain E4184_16910 PF08335 GlnD PII-uridylyltransferase E4184_16910 PF01966 HD domain E4184_16910 PF01909 Nucleotidyltransferase domain E4184_16915 PF14602 Hexapeptide repeat of succinyl-transferase E4184_16915 PF00132 Bacterial transferase hexapeptide (six repeats) E4184_16915 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal E4184_16920 PF11944 Protein of unknown function (DUF3461) E4184_16925 PF02378 Phosphotransferase system, EIIC E4184_16925 PF00367 phosphotransferase system, EIIB E4184_16930 PF07148 Maltose operon periplasmic protein precursor (MalM) E4184_16935 PF02264 LamB porin E4184_16940 PF00258 Flavodoxin E4184_16945 PF00849 RNA pseudouridylate synthase E4184_16950 PF04287 tRNA pseudouridine synthase C E4184_16975 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) E4184_16980 PF07348 Syd protein (SUKH-2) E4184_16985 PF14489 QueF-like protein E4184_16985 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term E4184_16995 PF00990 Diguanylate cyclase, GGDEF domain E4184_17000 PF03641 Possible lysine decarboxylase E4184_17000 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases E4184_17000 PF11892 Domain of unknown function (DUF3412) E4184_17005 PF01367 5'-3' exonuclease, C-terminal SAM fold E4184_17005 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E4184_17015 PF18324 Hypothetical protein TT1725 E4184_17015 PF00180 Isocitrate/isopropylmalate dehydrogenase E4184_17025 PF18125 RlmM ferredoxin-like domain E4184_17025 PF01728 FtsJ-like methyltransferase E4184_17030 PF04241 Protein of unknown function (DUF423) E4184_17040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_17040 PF03466 LysR substrate binding domain E4184_17045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_17045 PF00672 HAMP domain E4184_17050 PF11799 impB/mucB/samB family C-terminal domain E4184_17050 PF00817 impB/mucB/samB family E4184_17050 PF11798 IMS family HHH motif E4184_17065 PF02424 ApbE family E4184_17070 PF00970 Oxidoreductase FAD-binding domain E4184_17070 PF00175 Oxidoreductase NAD-binding domain E4184_17070 PF00111 2Fe-2S iron-sulfur cluster binding domain E4184_17075 PF02508 Rnf-Nqr subunit, membrane protein E4184_17080 PF02508 Rnf-Nqr subunit, membrane protein E4184_17085 PF04205 FMN-binding domain E4184_17090 PF03116 NQR2, RnfD, RnfE family E4184_17095 PF11973 NQRA C-terminal domain E4184_17095 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) E4184_17105 PF01722 BolA-like protein E4184_17110 PF05175 Methyltransferase small domain E4184_17120 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E4184_17130 PF07690 Major Facilitator Superfamily E4184_17135 PF03502 Nucleoside-specific channel-forming protein, Tsx E4184_17140 PF04461 Protein of unknown function (DUF520) E4184_17145 PF08546 Ketopantoate reductase PanE/ApbA C terminal E4184_17145 PF02558 Ketopantoate reductase PanE/ApbA E4184_17150 PF01965 DJ-1/PfpI family E4184_17165 PF01527 Transposase E4184_17165 PF00665 Integrase core domain E4184_17165 PF13276 HTH-like domain E4184_17195 PF04545 Sigma-70, region 4 E4184_17195 PF04542 Sigma-70 region 2 E4184_17200 PF03960 ArsC family E4184_17205 PF01758 Sodium Bile acid symporter family E4184_17215 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E4184_17215 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E4184_17240 PF00589 Phage integrase family E4184_17240 PF13356 Arm DNA-binding domain E4184_17250 PF05930 Prophage CP4-57 regulatory protein (AlpA) E4184_17340 PF04002 RadC-like JAB domain E4184_17390 PF02342 TerD domain E4184_17420 PF00005 ABC transporter E4184_17430 PF03781 Sulfatase-modifying factor enzyme 1 E4184_17440 PF05154 TM2 domain E4184_17460 PF16363 GDP-mannose 4,6 dehydratase E4184_17465 PF00970 Oxidoreductase FAD-binding domain E4184_17465 PF00111 2Fe-2S iron-sulfur cluster binding domain E4184_17465 PF00175 Oxidoreductase NAD-binding domain E4184_17470 PF03063 Prismane/CO dehydrogenase family E4184_17475 PF00210 Ferritin-like domain E4184_17515 PF00106 short chain dehydrogenase E4184_17525 PF03441 FAD binding domain of DNA photolyase E4184_17525 PF00875 DNA photolyase E4184_17530 PF13411 MerR HTH family regulatory protein E4184_17535 PF08349 Protein of unknown function (DUF1722) E4184_17560 PF00800 Prephenate dehydratase E4184_17560 PF01817 Chorismate mutase type II E4184_17585 PF03976 Polyphosphate kinase 2 (PPK2) E4184_17590 PF00916 Sulfate permease family E4184_17590 PF01740 STAS domain E4184_17595 PF07995 Glucose / Sorbosone dehydrogenase E4184_17605 PF08220 DeoR-like helix-turn-helix domain E4184_17605 PF00455 DeoR C terminal sensor domain E4184_17610 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E4184_17610 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E4184_17615 PF17042 Nucleotide-binding C-terminal domain E4184_17615 PF07005 Sugar-binding N-terminal domain E4184_17620 PF00596 Class II Aldolase and Adducin N-terminal domain E4184_17625 PF01261 Xylose isomerase-like TIM barrel E4184_17630 PF01370 NAD dependent epimerase/dehydratase family E4184_17635 PF02447 GntP family permease E4184_17645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_17650 PF03573 outer membrane porin, OprD family E4184_17655 PF00106 short chain dehydrogenase E4184_17680 PF02074 Carboxypeptidase Taq (M32) metallopeptidase E4184_17685 PF12833 Helix-turn-helix domain E4184_17685 PF00730 HhH-GPD superfamily base excision DNA repair protein E4184_17685 PF06029 AlkA N-terminal domain E4184_17685 PF02805 Metal binding domain of Ada E4184_17690 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E4184_17690 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E4184_17700 PF06906 Protein of unknown function (DUF1272) E4184_17715 PF01609 Transposase DDE domain E4184_17715 PF13808 DDE_Tnp_1-associated E4184_17720 PF13358 DDE superfamily endonuclease E4184_17720 PF13592 Winged helix-turn helix E4184_17725 PF12392 Collagenase E4184_17725 PF01136 Peptidase family U32 E4184_17735 PF01810 LysE type translocator E4184_17740 PF03466 LysR substrate binding domain E4184_17740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_17745 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E4184_17745 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4184_17780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E4184_17780 PF00384 Molybdopterin oxidoreductase E4184_17780 PF01568 Molydopterin dinucleotide binding domain E4184_17785 PF03916 Polysulphide reductase, NrfD E4184_17790 PF13247 4Fe-4S dicluster domain E4184_17795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_17795 PF00512 His Kinase A (phospho-acceptor) domain E4184_17795 PF00989 PAS fold E4184_17800 PF00072 Response regulator receiver domain E4184_17800 PF00196 Bacterial regulatory proteins, luxR family E4184_17805 PF03575 Peptidase family S51 E4184_17810 PF07690 Major Facilitator Superfamily E4184_17815 PF00529 HlyD membrane-fusion protein of T1SS E4184_17815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E4184_17825 PF00206 Lyase E4184_17825 PF10415 Fumarase C C-terminus E4184_17835 PF14850 DNA-binding domain of Proline dehydrogenase E4184_17835 PF01619 Proline dehydrogenase E4184_17835 PF00171 Aldehyde dehydrogenase family E4184_17835 PF18327 Proline utilization A proline dehydrogenase N-terminal domain E4184_17840 PF01168 Alanine racemase, N-terminal domain E4184_17840 PF00842 Alanine racemase, C-terminal domain E4184_17845 PF00772 DnaB-like helicase N terminal domain E4184_17845 PF03796 DnaB-like helicase C terminal domain E4184_17855 PF02872 5'-nucleotidase, C-terminal domain E4184_17855 PF00149 Calcineurin-like phosphoesterase E4184_17875 PF02954 Bacterial regulatory protein, Fis family E4184_17875 PF00072 Response regulator receiver domain E4184_17875 PF00158 Sigma-54 interaction domain E4184_17880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4184_17880 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E4184_17890 PF04102 SlyX E4184_17895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4184_17900 PF09526 Probable metal-binding protein (DUF2387) E4184_17910 PF01584 CheW-like domain E4184_17910 PF00072 Response regulator receiver domain E4184_17915 PF00561 alpha/beta hydrolase fold E4184_17920 PF00360 Phytochrome region E4184_17920 PF00563 EAL domain E4184_17920 PF00990 Diguanylate cyclase, GGDEF domain E4184_17920 PF01590 GAF domain E4184_17925 PF06794 Uncharacterised protein family (UPF0270) E4184_17930 PF00485 Phosphoribulokinase / Uridine kinase family E4184_17945 PF02566 OsmC-like protein E4184_17950 PF00027 Cyclic nucleotide-binding domain E4184_17950 PF13545 Crp-like helix-turn-helix domain E4184_17955 PF08241 Methyltransferase domain E4184_17960 PF00704 Glycosyl hydrolases family 18 E4184_17960 PF08329 Chitinase A, N-terminal domain E4184_17965 PF00512 His Kinase A (phospho-acceptor) domain E4184_17965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_17970 PF12832 MFS_1 like family E4184_17975 PF00593 TonB dependent receptor E4184_17975 PF07715 TonB-dependent Receptor Plug Domain E4184_17995 PF01243 Pyridoxamine 5'-phosphate oxidase E4184_18000 PF06228 Haem utilisation ChuX/HutX E4184_18010 PF01032 FecCD transport family E4184_18015 PF00005 ABC transporter E4184_18025 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E4184_18025 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E4184_18025 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E4184_18030 PF01370 NAD dependent epimerase/dehydratase family E4184_18035 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase E4184_18045 PF00535 Glycosyl transferase family 2 E4184_18050 PF01464 Transglycosylase SLT domain E4184_18055 PF00005 ABC transporter E4184_18055 PF12848 ABC transporter E4184_18065 PF00860 Permease family E4184_18070 PF05099 Tellurite resistance protein TerB E4184_18070 PF00226 DnaJ domain E4184_18075 PF00483 Nucleotidyl transferase E4184_18080 PF01636 Phosphotransferase enzyme family E4184_18085 PF04453 LPS transport system D E4184_18085 PF03968 OstA-like protein E4184_18090 PF09312 SurA N-terminal domain E4184_18090 PF00639 PPIC-type PPIASE domain E4184_18095 PF04166 Pyridoxal phosphate biosynthetic protein PdxA E4184_18100 PF00398 Ribosomal RNA adenine dimethylase E4184_18105 PF04379 ApaG domain E4184_18110 PF00149 Calcineurin-like phosphoesterase E4184_18120 PF00296 Luciferase-like monooxygenase E4184_18125 PF01966 HD domain E4184_18135 PF01018 GTP1/OBG E4184_18135 PF01926 50S ribosome-binding GTPase E4184_18140 PF01016 Ribosomal L27 protein E4184_18145 PF00829 Ribosomal prokaryotic L21 protein E4184_18150 PF00348 Polyprenyl synthetase E4184_18155 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) E4184_18160 PF01145 SPFH domain / Band 7 family E4184_18165 PF12221 Bacterial membrane protein N terminal E4184_18165 PF01145 SPFH domain / Band 7 family E4184_18170 PF01926 50S ribosome-binding GTPase E4184_18170 PF16360 GTP-binding GTPase Middle Region E4184_18170 PF13167 GTP-binding GTPase N-terminal E4184_18175 PF17209 Hfq protein E4184_18185 PF08676 MutL C terminal dimerisation domain E4184_18185 PF01119 DNA mismatch repair protein, C-terminal domain E4184_18190 PF01520 N-acetylmuramoyl-L-alanine amidase E4184_18195 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE E4184_18200 PF01256 Carbohydrate kinase E4184_18200 PF03853 YjeF-related protein N-terminus E4184_18205 PF08331 Domain of unknown function (DUF1730) E4184_18210 PF00480 ROK family E4184_18220 PF00005 ABC transporter E4184_18220 PF09383 NIL domain E4184_18225 PF00528 Binding-protein-dependent transport system inner membrane component E4184_18230 PF03180 NLPA lipoprotein E4184_18235 PF02357 Transcription termination factor nusG E4184_18240 PF00672 HAMP domain E4184_18240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_18245 PF00563 EAL domain E4184_18245 PF03707 Bacterial signalling protein N terminal repeat E4184_18245 PF00990 Diguanylate cyclase, GGDEF domain E4184_18250 PF00072 Response regulator receiver domain E4184_18250 PF09456 RcsC Alpha-Beta-Loop (ABL) E4184_18250 PF00512 His Kinase A (phospho-acceptor) domain E4184_18250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_18260 PF01966 HD domain E4184_18260 PF13286 Phosphohydrolase-associated domain E4184_18265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_18265 PF00512 His Kinase A (phospho-acceptor) domain E4184_18265 PF18415 Histidine kinase receptor ArcB trans-membrane domain E4184_18265 PF01627 Hpt domain E4184_18265 PF00989 PAS fold E4184_18265 PF00072 Response regulator receiver domain E4184_18290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_18290 PF03466 LysR substrate binding domain E4184_18300 PF01259 SAICAR synthetase E4184_18305 PF06804 NlpB/DapX lipoprotein E4184_18310 PF00701 Dihydrodipicolinate synthetase family E4184_18315 PF01842 ACT domain E4184_18320 PF00578 AhpC/TSA family E4184_18325 PF03887 YfbU domain E4184_18330 PF04217 Protein of unknown function, DUF412 E4184_18335 PF00871 Acetokinase family E4184_18340 PF07085 DRTGG domain E4184_18340 PF01515 Phosphate acetyl/butaryl transferase E4184_18345 PF10369 Small subunit of acetolactate synthase E4184_18350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E4184_18350 PF00205 Thiamine pyrophosphate enzyme, central domain E4184_18350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4184_18360 PF03033 Glycosyltransferase family 28 N-terminal domain E4184_18360 PF04101 Glycosyltransferase family 28 C-terminal domain E4184_18365 PF01569 PAP2 superfamily E4184_18375 PF01609 Transposase DDE domain E4184_18385 PF08502 LeuA allosteric (dimerisation) domain E4184_18385 PF00682 HMGL-like E4184_18390 PF00180 Isocitrate/isopropylmalate dehydrogenase E4184_18395 PF00330 Aconitase family (aconitate hydratase) E4184_18400 PF00694 Aconitase C-terminal domain E4184_18425 PF00528 Binding-protein-dependent transport system inner membrane component E4184_18430 PF00005 ABC transporter E4184_18435 PF13638 PIN domain E4184_18435 PF02562 PhoH-like protein E4184_18445 PF00317 Ribonucleotide reductase, all-alpha domain E4184_18445 PF02867 Ribonucleotide reductase, barrel domain E4184_18445 PF08343 Ribonucleotide reductase N-terminal E4184_18475 PF01521 Iron-sulphur cluster biosynthesis E4184_18485 PF00654 Voltage gated chloride channel E4184_18490 PF00202 Aminotransferase class-III E4184_18505 PF01569 PAP2 superfamily E4184_18515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_18515 PF03466 LysR substrate binding domain E4184_18520 PF00893 Small Multidrug Resistance protein E4184_18525 PF00893 Small Multidrug Resistance protein E4184_18530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4184_18535 PF00912 Transglycosylase E4184_18535 PF00905 Penicillin binding protein transpeptidase domain E4184_18535 PF14814 Bifunctional transglycosylase second domain E4184_18550 PF17746 SfsA N-terminal OB domain E4184_18550 PF03749 Sugar fermentation stimulation protein RE domain E4184_18555 PF01258 Prokaryotic dksA/traR C4-type zinc finger E4184_18560 PF00749 tRNA synthetases class I (E and Q), catalytic domain E4184_18565 PF01743 Poly A polymerase head domain E4184_18565 PF12626 Polymerase A arginine-rich C-terminus E4184_18565 PF12627 Probable RNA and SrmB- binding site of polymerase A E4184_18570 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) E4184_18575 PF02548 Ketopantoate hydroxymethyltransferase E4184_18580 PF02569 Pantoate-beta-alanine ligase E4184_18590 PF01061 ABC-2 type transporter E4184_18595 PF00005 ABC transporter E4184_18600 PF00156 Phosphoribosyl transferase domain E4184_18605 PF00440 Bacterial regulatory proteins, tetR family E4184_18610 PF02441 Flavoprotein E4184_18615 PF08245 Mur ligase middle domain E4184_18615 PF02875 Mur ligase family, glutamate ligase domain E4184_18615 PF01225 Mur ligase family, catalytic domain E4184_18620 PF00719 Inorganic pyrophosphatase E4184_18635 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) E4184_18650 PF00005 ABC transporter E4184_18670 PF12729 Four helix bundle sensory module for signal transduction E4184_18670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_18670 PF00672 HAMP domain E4184_18680 PF05598 Transposase domain (DUF772) E4184_18680 PF01609 Transposase DDE domain E4184_18695 PF02080 TrkA-C domain E4184_18695 PF03600 Citrate transporter E4184_18700 PF00009 Elongation factor Tu GTP binding domain E4184_18705 PF01507 Phosphoadenosine phosphosulfate reductase family E4184_18710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4184_18710 PF10414 Sirohaem synthase dimerisation region E4184_18710 PF14824 Sirohaem biosynthesis protein central E4184_18715 PF01145 SPFH domain / Band 7 family E4184_18715 PF16200 C-terminal region of band_7 E4184_18720 PF01957 NfeD-like C-terminal, partner-binding E4184_18730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E4184_18730 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E4184_18735 PF07690 Major Facilitator Superfamily E4184_18740 PF01725 Ham1 family E4184_18745 PF06969 HemN C-terminal domain E4184_18745 PF04055 Radical SAM superfamily E4184_18750 PF03889 Alternative ribosome-rescue factor A E4184_18760 PF13411 MerR HTH family regulatory protein E4184_18765 PF02142 MGS-like domain E4184_18765 PF01808 AICARFT/IMPCHase bienzyme E4184_18770 PF02844 Phosphoribosylglycinamide synthetase, N domain E4184_18770 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E4184_18770 PF02843 Phosphoribosylglycinamide synthetase, C domain E4184_18785 PF00128 Alpha amylase, catalytic domain E4184_18800 PF04542 Sigma-70 region 2 E4184_18800 PF04546 Sigma-70, non-essential region E4184_18800 PF03979 Sigma-70 factor, region 1.1 E4184_18800 PF04539 Sigma-70 region 3 E4184_18800 PF04545 Sigma-70, region 4 E4184_18800 PF00140 Sigma-70 factor, region 1.2 E4184_18805 PF08275 DNA primase catalytic core, N-terminal domain E4184_18805 PF08278 DNA primase DnaG DnaB-binding E4184_18805 PF10410 DnaB-helicase binding domain of primase E4184_18805 PF01807 CHC2 zinc finger E4184_18810 PF09424 Yqey-like protein E4184_18815 PF01165 Ribosomal protein S21 E4184_18820 PF00814 Glycoprotease family E4184_18825 PF04539 Sigma-70 region 3 E4184_18825 PF00140 Sigma-70 factor, region 1.2 E4184_18825 PF04545 Sigma-70, region 4 E4184_18825 PF04542 Sigma-70 region 2 E4184_18830 PF01476 LysM domain E4184_18830 PF01551 Peptidase family M23 E4184_18835 PF09335 SNARE associated Golgi protein E4184_18845 PF01975 Survival protein SurE E4184_18850 PF01142 tRNA pseudouridine synthase D (TruD) E4184_18855 PF02542 YgbB family E4184_18860 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E4184_18865 PF04977 Septum formation initiator E4184_18870 PF03952 Enolase, N-terminal domain E4184_18870 PF00113 Enolase, C-terminal TIM barrel domain E4184_18875 PF06418 CTP synthase N-terminus E4184_18875 PF00117 Glutamine amidotransferase class-I E4184_18880 PF03819 MazG nucleotide pyrophosphohydrolase domain E4184_18885 PF04607 Region found in RelA / SpoT proteins E4184_18885 PF13291 ACT domain E4184_18885 PF02824 TGS domain E4184_18890 PF01938 TRAM domain E4184_18890 PF05958 tRNA (Uracil-5-)-methyltransferase E4184_18895 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E4184_18895 PF00072 Response regulator receiver domain E4184_18895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_18895 PF01627 Hpt domain E4184_18895 PF00672 HAMP domain E4184_18895 PF00512 His Kinase A (phospho-acceptor) domain E4184_18900 PF07308 Protein of unknown function (DUF1456) E4184_18905 PF01510 N-acetylmuramoyl-L-alanine amidase E4184_18910 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ E4184_18915 PF11967 Recombination protein O N terminal E4184_18915 PF02565 Recombination protein O C terminal E4184_18920 PF01926 50S ribosome-binding GTPase E4184_18920 PF07650 KH domain E4184_18925 PF14622 Ribonuclease-III-like E4184_18925 PF00035 Double-stranded RNA binding motif E4184_18930 PF10502 Signal peptidase, peptidase S26 E4184_18935 PF00009 Elongation factor Tu GTP binding domain E4184_18935 PF00679 Elongation factor G C-terminus E4184_18935 PF03144 Elongation factor Tu domain 2 E4184_18935 PF06421 GTP-binding protein LepA C-terminus E4184_18945 PF03888 MucB/RseB N-terminal domain E4184_18945 PF17188 MucB/RseB C-terminal domain E4184_18950 PF03872 Anti sigma-E protein RseA, N-terminal domain E4184_18950 PF03873 Anti sigma-E protein RseA, C-terminal domain E4184_18955 PF08281 Sigma-70, region 4 E4184_18955 PF04542 Sigma-70 region 2 E4184_18960 PF00890 FAD binding domain E4184_18960 PF02910 Fumarate reductase flavoprotein C-term E4184_18970 PF03937 Flavinator of succinate dehydrogenase E4184_18975 PF01571 Aminomethyltransferase folate-binding domain E4184_18980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_18980 PF03466 LysR substrate binding domain E4184_18995 PF03091 CutA1 divalent ion tolerance protein E4184_19000 PF11412 Disulphide bond corrector protein DsbC E4184_19000 PF02683 Cytochrome C biogenesis protein transmembrane region E4184_19010 PF01266 FAD dependent oxidoreductase E4184_19015 PF01116 Fructose-bisphosphate aldolase class-II E4184_19020 PF00162 Phosphoglycerate kinase E4184_19025 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E4184_19025 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E4184_19030 PF00480 ROK family E4184_19035 PF01208 Uroporphyrinogen decarboxylase (URO-D) E4184_19040 PF09297 NADH pyrophosphatase zinc ribbon domain E4184_19040 PF00293 NUDIX domain E4184_19045 PF08239 Bacterial SH3 domain E4184_19050 PF00027 Cyclic nucleotide-binding domain E4184_19050 PF00520 Ion transport protein E4184_19055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_19055 PF00672 HAMP domain E4184_19065 PF03710 Glutamate-ammonia ligase adenylyltransferase E4184_19065 PF08335 GlnD PII-uridylyltransferase E4184_19080 PF00326 Prolyl oligopeptidase family E4184_19080 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4184_19085 PF13194 Domain of unknown function (DUF4010) E4184_19090 PF12464 Maltose acetyltransferase E4184_19090 PF14602 Hexapeptide repeat of succinyl-transferase E4184_19100 PF02378 Phosphotransferase system, EIIC E4184_19100 PF00367 phosphotransferase system, EIIB E4184_19105 PF01547 Bacterial extracellular solute-binding protein E4184_19110 PF00512 His Kinase A (phospho-acceptor) domain E4184_19110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_19110 PF08521 Two-component sensor kinase N-terminal E4184_19115 PF00486 Transcriptional regulatory protein, C terminal E4184_19115 PF00072 Response regulator receiver domain E4184_19135 PF14552 Tautomerase enzyme E4184_19145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_19145 PF03466 LysR substrate binding domain E4184_19150 PF00206 Lyase E4184_19150 PF14698 Argininosuccinate lyase C-terminal E4184_19160 PF00764 Arginosuccinate synthase E4184_19165 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4184_19165 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4184_19170 PF00696 Amino acid kinase family E4184_19175 PF02774 Semialdehyde dehydrogenase, dimerisation domain E4184_19175 PF01118 Semialdehyde dehydrogenase, NAD binding domain E4184_19180 PF01546 Peptidase family M20/M25/M40 E4184_19180 PF07687 Peptidase dimerisation domain E4184_19185 PF00311 Phosphoenolpyruvate carboxylase E4184_19190 PF13006 Insertion element 4 transposase N-terminal E4184_19190 PF01609 Transposase DDE domain E4184_19195 PF13426 PAS domain E4184_19195 PF05231 MASE1 E4184_19195 PF00990 Diguanylate cyclase, GGDEF domain E4184_19195 PF08448 PAS fold E4184_19195 PF08447 PAS fold E4184_19195 PF00563 EAL domain E4184_19200 PF04073 Aminoacyl-tRNA editing domain E4184_19220 PF00392 Bacterial regulatory proteins, gntR family E4184_19220 PF00155 Aminotransferase class I and II E4184_19230 PF03466 LysR substrate binding domain E4184_19230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_19235 PF03788 LrgA family E4184_19240 PF04172 LrgB-like family E4184_19245 PF00742 Homoserine dehydrogenase E4184_19245 PF00696 Amino acid kinase family E4184_19245 PF03447 Homoserine dehydrogenase, NAD binding domain E4184_19250 PF01053 Cys/Met metabolism PLP-dependent enzyme E4184_19255 PF01340 Met Apo-repressor, MetJ E4184_19260 PF12833 Helix-turn-helix domain E4184_19260 PF02311 AraC-like ligand binding domain E4184_19265 PF01588 Putative tRNA binding domain E4184_19270 PF03222 Tryptophan/tyrosine permease family E4184_19275 PF00459 Inositol monophosphatase family E4184_19280 PF00293 NUDIX domain E4184_19285 PF13419 Haloacid dehalogenase-like hydrolase E4184_19290 PF00579 tRNA synthetases class I (W and Y) E4184_19290 PF01479 S4 domain E4184_19295 PF00196 Bacterial regulatory proteins, luxR family E4184_19300 PF01203 Type II secretion system (T2SS), protein N E4184_19305 PF04612 Type II secretion system (T2SS), protein M E4184_19310 PF05134 Type II secretion system (T2SS), protein L E4184_19310 PF12693 GspL periplasmic domain E4184_19315 PF03934 Type II secretion system (T2SS), protein K E4184_19320 PF07963 Prokaryotic N-terminal methylation motif E4184_19320 PF11612 Type II secretion system (T2SS), protein J E4184_19325 PF02501 Type II secretion system (T2SS), protein I E4184_19325 PF07963 Prokaryotic N-terminal methylation motif E4184_19330 PF07963 Prokaryotic N-terminal methylation motif E4184_19330 PF12019 Type II transport protein GspH E4184_19335 PF07963 Prokaryotic N-terminal methylation motif E4184_19335 PF08334 Type II secretion system (T2SS), protein G E4184_19340 PF00482 Type II secretion system (T2SS), protein F E4184_19345 PF00437 Type II/IV secretion system protein E4184_19350 PF03958 Bacterial type II/III secretion system short domain E4184_19350 PF00263 Bacterial type II and III secretion system protein E4184_19355 PF11356 Type II secretion system protein C E4184_19360 PF01479 S4 domain E4184_19365 PF01430 Hsp33 protein E4184_19370 PF01293 Phosphoenolpyruvate carboxykinase E4184_19375 PF00392 Bacterial regulatory proteins, gntR family E4184_19380 PF00557 Metallopeptidase family M24 E4184_19380 PF01321 Creatinase/Prolidase N-terminal domain E4184_19390 PF05433 Glycine zipper 2TM domain E4184_19395 PF01928 CYTH domain E4184_19400 PF01865 Protein of unknown function DUF47 E4184_19405 PF01384 Phosphate transporter family E4184_19410 PF01743 Poly A polymerase head domain E4184_19410 PF01966 HD domain E4184_19410 PF12627 Probable RNA and SrmB- binding site of polymerase A E4184_19415 PF13401 AAA domain E4184_19415 PF01471 Putative peptidoglycan binding domain E4184_19420 PF16537 Type II secretion system protein B E4184_19425 PF14815 NUDIX domain E4184_19425 PF00730 HhH-GPD superfamily base excision DNA repair protein E4184_19425 PF00633 Helix-hairpin-helix motif E4184_19425 PF10576 Iron-sulfur binding domain of endonuclease III E4184_19430 PF04362 Bacterial Fe(2+) trafficking E4184_19435 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain E4184_19435 PF01464 Transglycosylase SLT domain E4184_19445 PF00657 GDSL-like Lipase/Acylhydrolase E4184_19450 PF00691 OmpA family E4184_19450 PF01389 OmpA-like transmembrane domain E4184_19455 PF03886 ABC-type transport auxiliary lipoprotein component E4184_19460 PF02470 MlaD protein E4184_19465 PF04403 Paraquat-inducible protein A E4184_19470 PF17209 Hfq protein E4184_19475 PF13419 Haloacid dehalogenase-like hydrolase E4184_19480 PF00990 Diguanylate cyclase, GGDEF domain E4184_19480 PF01590 GAF domain E4184_19480 PF00563 EAL domain E4184_19480 PF00360 Phytochrome region E4184_19485 PF00701 Dihydrodipicolinate synthetase family E4184_19490 PF08468 Methyltransferase small domain N-terminal E4184_19490 PF05175 Methyltransferase small domain E4184_19495 PF00483 Nucleotidyl transferase E4184_19500 PF08323 Starch synthase catalytic domain E4184_19500 PF00534 Glycosyl transferases group 1 E4184_19530 PF03553 Na+/H+ antiporter family E4184_19535 PF03466 LysR substrate binding domain E4184_19535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_19540 PF13416 Bacterial extracellular solute-binding protein E4184_19545 PF08402 TOBE domain E4184_19545 PF00005 ABC transporter E4184_19550 PF00528 Binding-protein-dependent transport system inner membrane component E4184_19555 PF00528 Binding-protein-dependent transport system inner membrane component E4184_19560 PF00171 Aldehyde dehydrogenase family E4184_19565 PF01040 UbiA prenyltransferase family E4184_19570 PF02628 Cytochrome oxidase assembly protein E4184_19590 PF00510 Cytochrome c oxidase subunit III E4184_19595 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 E4184_19600 PF00115 Cytochrome C and Quinol oxidase polypeptide I E4184_19605 PF02790 Cytochrome C oxidase subunit II, transmembrane domain E4184_19605 PF00116 Cytochrome C oxidase subunit II, periplasmic domain E4184_19610 PF08351 Domain of unknown function (DUF1726) E4184_19610 PF17176 tRNA-binding domain E4184_19610 PF13718 GNAT acetyltransferase 2 E4184_19610 PF05127 Helicase E4184_19625 PF00210 Ferritin-like domain E4184_19630 PF02142 MGS-like domain E4184_19645 PF17763 Glutaminase/Asparaginase C-terminal domain E4184_19645 PF00710 Asparaginase, N-terminal E4184_19655 PF00356 Bacterial regulatory proteins, lacI family E4184_19665 PF00480 ROK family E4184_19670 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit E4184_19675 PF00232 Glycosyl hydrolase family 1 E4184_19680 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E4184_19680 PF02378 Phosphotransferase system, EIIC E4184_19685 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E4184_19690 PF02378 Phosphotransferase system, EIIC E4184_19700 PF00356 Bacterial regulatory proteins, lacI family E4184_19705 PF00367 phosphotransferase system, EIIB E4184_19705 PF02378 Phosphotransferase system, EIIC E4184_19710 PF11941 Domain of unknown function (DUF3459) E4184_19710 PF00128 Alpha amylase, catalytic domain E4184_19715 PF14602 Hexapeptide repeat of succinyl-transferase E4184_19715 PF12464 Maltose acetyltransferase E4184_19720 PF01037 Lrp/AsnC ligand binding domain E4184_19725 PF00892 EamA-like transporter family E4184_19745 PF00691 OmpA family E4184_19745 PF01389 OmpA-like transmembrane domain E4184_19770 PF02660 Glycerol-3-phosphate acyltransferase E4184_19775 PF02152 Dihydroneopterin aldolase E4184_19780 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) E4184_19785 PF00672 HAMP domain E4184_19785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_19785 PF12729 Four helix bundle sensory module for signal transduction E4184_19790 PF07690 Major Facilitator Superfamily E4184_19795 PF07683 Cobalamin synthesis protein cobW C-terminal domain E4184_19795 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4184_19805 PF01810 LysE type translocator E4184_19810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_19810 PF03466 LysR substrate binding domain E4184_19815 PF03466 LysR substrate binding domain E4184_19815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_19825 PF00563 EAL domain E4184_19825 PF12792 CSS motif domain associated with EAL E4184_19830 PF12792 CSS motif domain associated with EAL E4184_19830 PF00563 EAL domain E4184_19835 PF00330 Aconitase family (aconitate hydratase) E4184_19835 PF06434 Aconitate hydratase 2 N-terminus E4184_19835 PF11791 Aconitate B N-terminal domain E4184_19840 PF01734 Patatin-like phospholipase E4184_19845 PF02743 Cache domain E4184_19845 PF00672 HAMP domain E4184_19845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_19850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_19850 PF00672 HAMP domain E4184_19850 PF12729 Four helix bundle sensory module for signal transduction E4184_19855 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4184_19855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4184_19860 PF00364 Biotin-requiring enzyme E4184_19860 PF02817 e3 binding domain E4184_19860 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E4184_19865 PF17831 Pyruvate dehydrogenase E1 component middle domain E4184_19865 PF00456 Transketolase, thiamine diphosphate binding domain E4184_19870 PF07729 FCD domain E4184_19870 PF00392 Bacterial regulatory proteins, gntR family E4184_19875 PF01510 N-acetylmuramoyl-L-alanine amidase E4184_19885 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain E4184_19885 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain E4184_19895 PF07963 Prokaryotic N-terminal methylation motif E4184_19900 PF00437 Type II/IV secretion system protein E4184_19900 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain E4184_19905 PF00482 Type II secretion system (T2SS), protein F E4184_19910 PF06750 Bacterial Peptidase A24 N-terminal domain E4184_19910 PF01478 Type IV leader peptidase family E4184_19915 PF01121 Dephospho-CoA kinase E4184_19920 PF07072 Cell division protein E4184_19925 PF03884 DNA gyrase inhibitor YacG E4184_19930 PF00293 NUDIX domain E4184_19935 PF01043 SecA preprotein cross-linking domain E4184_19935 PF02810 SEC-C motif E4184_19935 PF07517 SecA DEAD-like domain E4184_19935 PF07516 SecA Wing and Scaffold domain E4184_19945 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase E4184_19950 PF12327 FtsZ family, C-terminal domain E4184_19950 PF00091 Tubulin/FtsZ family, GTPase domain E4184_19955 PF02491 SHS2 domain inserted in FTSA E4184_19960 PF03799 Cell division protein FtsQ E4184_19960 PF08478 POTRA domain, FtsQ-type E4184_19965 PF01225 Mur ligase family, catalytic domain E4184_19965 PF02875 Mur ligase family, glutamate ligase domain E4184_19965 PF08245 Mur ligase middle domain E4184_19970 PF03033 Glycosyltransferase family 28 N-terminal domain E4184_19970 PF04101 Glycosyltransferase family 28 C-terminal domain E4184_19975 PF01098 Cell cycle protein E4184_19980 PF08245 Mur ligase middle domain E4184_19980 PF02875 Mur ligase family, glutamate ligase domain E4184_19985 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 E4184_19985 PF00953 Glycosyl transferase family 4 E4184_19990 PF02875 Mur ligase family, glutamate ligase domain E4184_19990 PF01225 Mur ligase family, catalytic domain E4184_19990 PF08245 Mur ligase middle domain E4184_19995 PF08245 Mur ligase middle domain E4184_19995 PF01225 Mur ligase family, catalytic domain E4184_19995 PF02875 Mur ligase family, glutamate ligase domain E4184_20000 PF00905 Penicillin binding protein transpeptidase domain E4184_20000 PF03717 Penicillin-binding Protein dimerisation domain E4184_20005 PF04999 Cell division protein FtsL E4184_20010 PF01795 MraW methylase family E4184_20015 PF02381 MraZ protein, putative antitoxin-like E4184_20025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4184_20030 PF04348 LppC putative lipoprotein E4184_20035 PF02021 Uncharacterised protein family UPF0102 E4184_20040 PF13580 SIS domain E4184_20045 PF04972 BON domain E4184_20050 PF04386 Stringent starvation protein B E4184_20055 PF00043 Glutathione S-transferase, C-terminal domain E4184_20055 PF02798 Glutathione S-transferase, N-terminal domain E4184_20060 PF02167 Cytochrome C1 family E4184_20065 PF00033 Cytochrome b/b6/petB E4184_20065 PF00032 Cytochrome b(C-terminal)/b6/petD E4184_20070 PF00355 Rieske [2Fe-2S] domain E4184_20070 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal E4184_20075 PF00380 Ribosomal protein S9/S16 E4184_20080 PF00572 Ribosomal protein L13 E4184_20085 PF03969 AFG1-like ATPase E4184_20095 PF13180 PDZ domain E4184_20095 PF00595 PDZ domain E4184_20100 PF13180 PDZ domain E4184_20130 PF01979 Amidohydrolase family E4184_20135 PF03841 L-seryl-tRNA selenium transferase E4184_20140 PF07071 KDGP aldolase E4184_20145 PF08279 HTH domain E4184_20145 PF00874 PRD domain E4184_20145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4184_20145 PF05043 Mga helix-turn-helix domain E4184_20150 PF00381 PTS HPr component phosphorylation site E4184_20155 PF03668 P-loop ATPase protein family E4184_20160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4184_20165 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein E4184_20170 PF04963 Sigma-54 factor, core binding domain E4184_20170 PF04552 Sigma-54, DNA binding domain E4184_20170 PF00309 Sigma-54 factor, Activator interacting domain (AID) E4184_20175 PF00005 ABC transporter E4184_20175 PF12399 Branched-chain amino acid ATP-binding cassette transporter E4184_20180 PF03968 OstA-like protein E4184_20185 PF06835 Lipopolysaccharide-assembly, LptC-related E4184_20195 PF01380 SIS domain E4184_20195 PF00571 CBS domain E4184_20200 PF00005 ABC transporter E4184_20205 PF02405 Permease MlaE E4184_20210 PF02470 MlaD protein E4184_20215 PF05494 MlaC protein E4184_20225 PF01722 BolA-like protein E4184_20230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4184_20240 PF01523 Putative modulator of DNA gyrase E4184_20245 PF04751 Protein of unknown function (DUF615) E4184_20255 PF04363 Protein of unknown function (DUF496) E4184_20285 PF07883 Cupin domain E4184_20285 PF01381 Helix-turn-helix E4184_20290 PF03594 Benzoate membrane transport protein E4184_20300 PF02219 Methylenetetrahydrofolate reductase E4184_20315 PF12729 Four helix bundle sensory module for signal transduction E4184_20315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4184_20315 PF00672 HAMP domain E4184_20320 PF03922 OmpW family E4184_20325 PF17760 UvrA interaction domain E4184_20325 PF17755 UvrA DNA-binding domain E4184_20325 PF00005 ABC transporter E4184_20335 PF03692 Putative zinc- or iron-chelating domain E4184_20340 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded E4184_20345 PF00267 Gram-negative porin E4184_20355 PF07715 TonB-dependent Receptor Plug Domain E4184_20355 PF00593 TonB dependent receptor E4184_20380 PF06055 Exopolysaccharide synthesis, ExoD E4184_20385 PF00990 Diguanylate cyclase, GGDEF domain E4184_20395 PF13036 Peptidoglycan-synthase activator LpoB E4184_20400 PF00132 Bacterial transferase hexapeptide (six repeats) E4184_20410 PF04055 Radical SAM superfamily E4184_20410 PF06968 Biotin and Thiamin Synthesis associated domain E4184_20415 PF05690 Thiazole biosynthesis protein ThiG E4184_20425 PF00899 ThiF family E4184_20430 PF02581 Thiamine monophosphate synthase E4184_20435 PF13667 ThiC-associated domain E4184_20435 PF01964 Radical SAM ThiC family E4184_20450 PF17425 Arylsulfotransferase Ig-like domain E4184_20450 PF05935 Arylsulfotransferase (ASST) E4184_20475 PF00072 Response regulator receiver domain E4184_20475 PF00486 Transcriptional regulatory protein, C terminal E4184_20485 PF18030 RimK PreATP-grasp domain E4184_20485 PF08443 RimK-like ATP-grasp domain E4184_20500 PF02310 B12 binding domain E4184_20500 PF02607 B12 binding domain E4184_20500 PF02965 Vitamin B12 dependent methionine synthase, activation domain E4184_20500 PF00809 Pterin binding enzyme E4184_20500 PF02574 Homocysteine S-methyltransferase E4184_20505 PF00999 Sodium/hydrogen exchanger family E4184_20515 PF14659 Phage integrase, N-terminal SAM-like domain E4184_20515 PF13356 Arm DNA-binding domain E4184_20515 PF00589 Phage integrase family E4184_20555 PF04320 Protein with unknown function (DUF469) E4184_20595 PF04228 Putative neutral zinc metallopeptidase E4184_20605 PF07690 Major Facilitator Superfamily E4184_20610 PF01914 MarC family integral membrane protein E4184_20620 PF01523 Putative modulator of DNA gyrase E4184_20625 PF00795 Carbon-nitrogen hydrolase E4184_20630 PF13502 AsmA-like C-terminal region E4184_20630 PF13116 Protein of unknown function E4184_20635 PF10150 Ribonuclease E/G family E4184_20635 PF00575 S1 RNA binding domain E4184_20640 PF02545 Maf-like protein E4184_20645 PF04093 rod shape-determining protein MreD E4184_20650 PF04085 rod shape-determining protein MreC E4184_20680 PF00114 Pilin (bacterial filament) E4184_20680 PF07963 Prokaryotic N-terminal methylation motif E4184_20685 PF08334 Type II secretion system (T2SS), protein G E4184_20685 PF07963 Prokaryotic N-terminal methylation motif E4184_20700 PF00482 Type II secretion system (T2SS), protein F E4184_20705 PF00437 Type II/IV secretion system protein E4184_20720 PF03958 Bacterial type II/III secretion system short domain E4184_20720 PF00263 Bacterial type II and III secretion system protein E4184_20755 PF00563 EAL domain E4184_20755 PF12792 CSS motif domain associated with EAL E4184_20760 PF01699 Sodium/calcium exchanger protein E4184_20765 PF00221 Aromatic amino acid lyase E4184_20770 PF01175 Urocanase Rossmann-like domain E4184_20770 PF17392 Urocanase C-terminal domain E4184_20770 PF17391 Urocanase N-terminal domain E4184_20775 PF00491 Arginase family E4184_20780 PF01979 Amidohydrolase family E4184_20785 PF00392 Bacterial regulatory proteins, gntR family E4184_20785 PF07702 UTRA domain E4184_20790 PF00484 Carbonic anhydrase E4184_20795 PF04542 Sigma-70 region 2 E4184_20795 PF00140 Sigma-70 factor, region 1.2 E4184_20795 PF04545 Sigma-70, region 4 E4184_20800 PF18075 FtsX extracellular domain E4184_20805 PF00005 ABC transporter E4184_20810 PF00448 SRP54-type protein, GTPase domain E4184_20810 PF02881 SRP54-type protein, helical bundle domain E4184_20830 PF07226 Protein of unknown function (DUF1422) E4184_20835 PF00440 Bacterial regulatory proteins, tetR family E4184_20845 PF13091 PLD-like domain E4184_20850 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4184_20850 PF01464 Transglycosylase SLT domain E4184_20860 PF02416 mttA/Hcf106 family E4184_20865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_20865 PF03466 LysR substrate binding domain E4184_20870 PF01914 MarC family integral membrane protein E4184_20875 PF10678 Protein of unknown function (DUF2492) E4184_20880 PF00375 Sodium:dicarboxylate symporter family E4184_20890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_20890 PF03466 LysR substrate binding domain E4184_20895 PF13533 Biotin-lipoyl like E4184_20900 PF07690 Major Facilitator Superfamily E4184_20905 PF07947 YhhN family E4184_20925 PF00326 Prolyl oligopeptidase family E4184_20925 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4184_20940 PF00106 short chain dehydrogenase E4184_20945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_20945 PF03466 LysR substrate binding domain E4184_20950 PF02525 Flavodoxin-like fold E4184_20955 PF02254 TrkA-N domain E4184_20955 PF00999 Sodium/hydrogen exchanger family E4184_20970 PF00665 Integrase core domain E4184_20975 PF01695 IstB-like ATP binding protein E4184_21020 PF01196 Ribosomal protein L17 E4184_21025 PF01000 RNA polymerase Rpb3/RpoA insert domain E4184_21025 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain E4184_21025 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain E4184_21030 PF00163 Ribosomal protein S4/S9 N-terminal domain E4184_21030 PF01479 S4 domain E4184_21035 PF00411 Ribosomal protein S11 E4184_21040 PF00416 Ribosomal protein S13/S18 E4184_21045 PF00444 Ribosomal protein L36 E4184_21050 PF00344 SecY translocase E4184_21055 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A E4184_21060 PF00327 Ribosomal protein L30p/L7e E4184_21065 PF00333 Ribosomal protein S5, N-terminal domain E4184_21065 PF03719 Ribosomal protein S5, C-terminal domain E4184_21070 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast E4184_21075 PF00347 Ribosomal protein L6 E4184_21080 PF00410 Ribosomal protein S8 E4184_21085 PF00253 Ribosomal protein S14p/S29e E4184_21090 PF00673 ribosomal L5P family C-terminus E4184_21090 PF00281 Ribosomal protein L5 E4184_21095 PF00467 KOW motif E4184_21095 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 E4184_21100 PF00238 Ribosomal protein L14p/L23e E4184_21105 PF00366 Ribosomal protein S17 E4184_21110 PF00831 Ribosomal L29 protein E4184_21115 PF00252 Ribosomal protein L16p/L10e E4184_21120 PF07650 KH domain E4184_21120 PF00189 Ribosomal protein S3, C-terminal domain E4184_21125 PF00237 Ribosomal protein L22p/L17e E4184_21130 PF00203 Ribosomal protein S19 E4184_21135 PF03947 Ribosomal Proteins L2, C-terminal domain E4184_21135 PF00181 Ribosomal Proteins L2, RNA binding domain E4184_21140 PF00276 Ribosomal protein L23 E4184_21145 PF00573 Ribosomal protein L4/L1 family E4184_21150 PF00297 Ribosomal protein L3 E4184_21155 PF00338 Ribosomal protein S10p/S20e E4184_21165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_21165 PF00512 His Kinase A (phospho-acceptor) domain E4184_21165 PF00672 HAMP domain E4184_21170 PF00486 Transcriptional regulatory protein, C terminal E4184_21170 PF00072 Response regulator receiver domain E4184_21180 PF16921 Tex protein YqgF-like domain E4184_21180 PF09371 Tex-like protein N-terminal domain E4184_21180 PF00575 S1 RNA binding domain E4184_21180 PF17674 HHH domain E4184_21200 PF00561 alpha/beta hydrolase fold E4184_21205 PF00156 Phosphoribosyl transferase domain E4184_21210 PF01106 NifU-like domain E4184_21210 PF01521 Iron-sulphur cluster biosynthesis E4184_21215 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus E4184_21215 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus E4184_21220 PF02556 Preprotein translocase subunit SecB E4184_21225 PF00581 Rhodanese-like domain E4184_21230 PF01676 Metalloenzyme superfamily E4184_21230 PF06415 BPG-independent PGAM N-terminus (iPGM_N) E4184_21235 PF01551 Peptidase family M23 E4184_21245 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E4184_21245 PF00356 Bacterial regulatory proteins, lacI family E4184_21260 PF01081 KDPG and KHG aldolase E4184_21265 PF00920 Dehydratase family E4184_21270 PF01202 Shikimate kinase E4184_21275 PF02447 GntP family permease E4184_21280 PF13091 PLD-like domain E4184_21285 PF00270 DEAD/DEAH box helicase E4184_21285 PF00271 Helicase conserved C-terminal domain E4184_21285 PF17191 RecG wedge domain E4184_21295 PF00583 Acetyltransferase (GNAT) family E4184_21295 PF09500 Putative thioesterase (yiiD_Cterm) E4184_21305 PF02580 D-Tyr-tRNA(Tyr) deacylase E4184_21310 PF03631 Virulence factor BrkB E4184_21315 PF03631 Virulence factor BrkB E4184_21325 PF03951 Glutamine synthetase, beta-Grasp domain E4184_21325 PF00120 Glutamine synthetase, catalytic domain E4184_21335 PF00989 PAS fold E4184_21335 PF00512 His Kinase A (phospho-acceptor) domain E4184_21335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_21340 PF00158 Sigma-54 interaction domain E4184_21340 PF00072 Response regulator receiver domain E4184_21340 PF02954 Bacterial regulatory protein, Fis family E4184_21345 PF00962 Adenosine/AMP deaminase E4184_21350 PF04055 Radical SAM superfamily E4184_21350 PF06969 HemN C-terminal domain E4184_21355 PF10675 Protein of unknown function (DUF2489) E4184_21360 PF04220 Der GTPase activator (YihI) E4184_21365 PF00034 Cytochrome c E4184_21370 PF01926 50S ribosome-binding GTPase E4184_21375 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E4184_21375 PF08501 Shikimate dehydrogenase substrate binding domain E4184_21375 PF01488 Shikimate / quinate 5-dehydrogenase E4184_21380 PF01218 Coproporphyrinogen III oxidase E4184_21385 PF01300 Telomere recombination E4184_21390 PF01396 Topoisomerase DNA binding C4 zinc finger E4184_21395 PF04361 Protein of unknown function (DUF494) E4184_21400 PF02481 DNA recombination-mediator protein A E4184_21400 PF17782 DprA winged helix domain E4184_21410 PF01327 Polypeptide deformylase E4184_21415 PF02911 Formyl transferase, C-terminal domain E4184_21415 PF00551 Formyl transferase E4184_21420 PF01029 NusB family E4184_21420 PF01189 16S rRNA methyltransferase RsmB/F E4184_21425 PF02080 TrkA-C domain E4184_21425 PF02254 TrkA-N domain E4184_21430 PF02386 Cation transport protein E4184_21435 PF02646 RmuC family E4184_21450 PF02082 Transcriptional regulator E4184_21455 PF00294 pfkB family carbohydrate kinase E4184_21460 PF03466 LysR substrate binding domain E4184_21460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_21465 PF00117 Glutamine amidotransferase class-I E4184_21465 PF00958 GMP synthase C terminal domain E4184_21465 PF02540 NAD synthase E4184_21470 PF00171 Aldehyde dehydrogenase family E4184_21475 PF00202 Aminotransferase class-III E4184_21480 PF01381 Helix-turn-helix E4184_21480 PF07883 Cupin domain E4184_21485 PF00171 Aldehyde dehydrogenase family E4184_21495 PF00892 EamA-like transporter family E4184_21500 PF12833 Helix-turn-helix domain E4184_21505 PF01810 LysE type translocator E4184_21510 PF04143 Sulphur transport E4184_21515 PF01810 LysE type translocator E4184_21520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_21520 PF03466 LysR substrate binding domain E4184_21525 PF06206 CpeT/CpcT family (DUF1001) E4184_21545 PF14001 YdfZ protein E4184_21555 PF02801 Beta-ketoacyl synthase, C-terminal domain E4184_21555 PF00109 Beta-ketoacyl synthase, N-terminal domain E4184_21565 PF01609 Transposase DDE domain E4184_21565 PF13006 Insertion element 4 transposase N-terminal E4184_21580 PF04972 BON domain E4184_21595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_21595 PF03466 LysR substrate binding domain E4184_21620 PF01609 Transposase DDE domain E4184_21620 PF13808 DDE_Tnp_1-associated E4184_21625 PF01609 Transposase DDE domain E4184_21635 PF00580 UvrD/REP helicase N-terminal domain E4184_21635 PF13361 UvrD-like helicase C-terminal domain E4184_21670 PF03466 LysR substrate binding domain E4184_21670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_21675 PF00107 Zinc-binding dehydrogenase E4184_21675 PF08240 Alcohol dehydrogenase GroES-like domain E4184_21680 PF00756 Putative esterase E4184_21695 PF03781 Sulfatase-modifying factor enzyme 1 E4184_21695 PF12867 DinB superfamily E4184_21705 PF03466 LysR substrate binding domain E4184_21705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4184_21735 PF13593 SBF-like CPA transporter family (DUF4137) E4184_21740 PF13520 Amino acid permease E4184_21745 PF01588 Putative tRNA binding domain E4184_21750 PF13520 Amino acid permease E4184_21755 PF04074 YhcH/YjgK/YiaL E4184_21760 PF02837 Glycosyl hydrolases family 2, sugar binding domain E4184_21760 PF02836 Glycosyl hydrolases family 2, TIM barrel domain E4184_21760 PF00703 Glycosyl hydrolases family 2 E4184_21760 PF16353 Domain of unknown function(DUF4981) E4184_21760 PF02929 Beta galactosidase small chain E4184_21765 PF00356 Bacterial regulatory proteins, lacI family E4184_21805 PF00132 Bacterial transferase hexapeptide (six repeats) E4184_21810 PF01612 3'-5' exonuclease E4184_21810 PF00476 DNA polymerase family A E4184_21810 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E4184_21810 PF01367 5'-3' exonuclease, C-terminal SAM fold E4184_21820 PF06005 Cell division protein ZapB E4184_21830 PF00132 Bacterial transferase hexapeptide (six repeats) E4184_21830 PF06426 Serine acetyltransferase, N-terminal E4184_21835 PF16916 Dimerisation domain of Zinc Transporter E4184_21835 PF01545 Cation efflux family E4184_21840 PF00072 Response regulator receiver domain E4184_21840 PF00486 Transcriptional regulatory protein, C terminal E4184_21845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_21845 PF16527 Two-component sensor protein CpxA, periplasmic domain E4184_21845 PF00672 HAMP domain E4184_21845 PF00512 His Kinase A (phospho-acceptor) domain E4184_21850 PF00588 SpoU rRNA Methylase family E4184_21855 PF01554 MatE E4184_21870 PF00717 Peptidase S24-like E4184_21870 PF01726 LexA DNA binding domain E4184_21875 PF01553 Acyltransferase E4184_21880 PF01609 Transposase DDE domain E4184_21880 PF13006 Insertion element 4 transposase N-terminal E4184_21885 PF01040 UbiA prenyltransferase family E4184_21890 PF04345 Chorismate lyase E4184_21895 PF03748 Flagellar basal body-associated protein FliL E4184_21910 PF08240 Alcohol dehydrogenase GroES-like domain E4184_21910 PF00107 Zinc-binding dehydrogenase E4184_21915 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E4184_21915 PF00356 Bacterial regulatory proteins, lacI family E4184_21920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4184_21930 PF03611 PTS system sugar-specific permease component E4184_21945 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) E4184_21965 PF01370 NAD dependent epimerase/dehydratase family E4184_21970 PF00440 Bacterial regulatory proteins, tetR family E4184_21970 PF08360 QacR-like protein, C-terminal region E4184_21975 PF00155 Aminotransferase class I and II E4184_21980 PF00107 Zinc-binding dehydrogenase E4184_21980 PF08240 Alcohol dehydrogenase GroES-like domain E4184_21990 PF00990 Diguanylate cyclase, GGDEF domain E4184_21990 PF03707 Bacterial signalling protein N terminal repeat E4184_21990 PF00563 EAL domain E4184_21995 PF13361 UvrD-like helicase C-terminal domain E4184_21995 PF00580 UvrD/REP helicase N-terminal domain E4184_22000 PF00266 Aminotransferase class-V E4184_22005 PF02657 Fe-S metabolism associated domain E4184_22010 PF00899 ThiF family E4184_22040 PF12724 Flavodoxin domain E4184_22045 PF02386 Cation transport protein E4184_22050 PF01205 Uncharacterized protein family UPF0029 E4184_22050 PF09186 Domain of unknown function (DUF1949) E4184_22055 PF00557 Metallopeptidase family M24 E4184_22060 PF00501 AMP-binding enzyme E4184_22060 PF13193 AMP-binding enzyme C-terminal domain E4184_22065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E4184_22065 PF00378 Enoyl-CoA hydratase/isomerase E4184_22065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E4184_22070 PF02803 Thiolase, C-terminal domain E4184_22070 PF00108 Thiolase, N-terminal domain E4184_22075 PF00072 Response regulator receiver domain E4184_22075 PF00486 Transcriptional regulatory protein, C terminal E4184_22080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_22080 PF00672 HAMP domain E4184_22080 PF00512 His Kinase A (phospho-acceptor) domain E4184_22085 PF01547 Bacterial extracellular solute-binding protein E4184_22100 PF01206 Sulfurtransferase TusA E4184_22105 PF01042 Endoribonuclease L-PSP E4184_22110 PF00691 OmpA family E4184_22110 PF13488 Glycine zipper E4184_22135 PF03352 Methyladenine glycosylase E4184_22140 PF02091 Glycyl-tRNA synthetase alpha subunit E4184_22145 PF02092 Glycyl-tRNA synthetase beta subunit E4184_22145 PF05746 DALR anticodon binding domain E4184_22195 PF03222 Tryptophan/tyrosine permease family E4184_22200 PF03222 Tryptophan/tyrosine permease family E4184_22205 PF01212 Beta-eliminating lyase E4184_22215 PF12801 4Fe-4S binding domain E4184_22225 PF18113 Rubredoxin binding C-terminal domain E4184_22225 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4184_22230 PF00301 Rubredoxin E4184_22230 PF00753 Metallo-beta-lactamase superfamily E4184_22230 PF00258 Flavodoxin E4184_22235 PF00158 Sigma-54 interaction domain E4184_22235 PF01590 GAF domain E4184_22240 PF13006 Insertion element 4 transposase N-terminal E4184_22240 PF01609 Transposase DDE domain E4184_22245 PF00356 Bacterial regulatory proteins, lacI family E4184_22250 PF13458 Periplasmic binding protein E4184_22255 PF02653 Branched-chain amino acid transport system / permease component E4184_22260 PF02653 Branched-chain amino acid transport system / permease component E4184_22260 PF11862 Domain of unknown function (DUF3382) E4184_22265 PF00005 ABC transporter E4184_22265 PF12399 Branched-chain amino acid ATP-binding cassette transporter E4184_22270 PF00005 ABC transporter E4184_22275 PF12833 Helix-turn-helix domain E4184_22285 PF00581 Rhodanese-like domain E4184_22290 PF01694 Rhomboid family E4184_22290 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease E4184_22295 PF12262 Bacterial virulence factor lipase N-terminal E4184_22300 PF04380 Membrane fusogenic activity E4184_22305 PF00175 Oxidoreductase NAD-binding domain E4184_22310 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase E4184_22320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4184_22320 PF07498 Rho termination factor, N-terminal domain E4184_22320 PF07497 Rho termination factor, RNA-binding domain E4184_22325 PF00085 Thioredoxin E4184_22330 PF00271 Helicase conserved C-terminal domain E4184_22330 PF00270 DEAD/DEAH box helicase E4184_22335 PF02541 Ppx/GppA phosphatase family E4184_22345 PF04445 Putative SAM-dependent methyltransferase E4184_22350 PF03707 Bacterial signalling protein N terminal repeat E4184_22350 PF00563 EAL domain E4184_22350 PF00990 Diguanylate cyclase, GGDEF domain E4184_22355 PF01432 Peptidase family M3 E4184_22360 PF00490 Delta-aminolevulinic acid dehydratase E4184_22365 PF01026 TatD related DNase E4184_22370 PF00902 Sec-independent protein translocase protein (TatC) E4184_22375 PF02416 mttA/Hcf106 family E4184_22380 PF02416 mttA/Hcf106 family E4184_22385 PF03109 ABC1 family E4184_22390 PF02036 SCP-2 sterol transfer family E4184_22395 PF01209 ubiE/COQ5 methyltransferase family E4184_22400 PF02537 CrcB-like protein, Camphor Resistance (CrcB) E4184_22405 PF07969 Amidohydrolase family E4184_22445 PF03544 Gram-negative bacterial TonB protein C-terminal E4184_22450 PF02472 Biopolymer transport protein ExbD/TolR E4184_22455 PF01618 MotA/TolQ/ExbB proton channel family E4184_22460 PF01618 MotA/TolQ/ExbB proton channel family E4184_22470 PF00196 Bacterial regulatory proteins, luxR family E4184_22470 PF03472 Autoinducer binding domain E4184_22480 PF00571 CBS domain E4184_22480 PF01380 SIS domain E4184_22485 PF00455 DeoR C terminal sensor domain E4184_22485 PF08220 DeoR-like helix-turn-helix domain E4184_22495 PF00106 short chain dehydrogenase E4184_22500 PF03829 PTS system glucitol/sorbitol-specific IIA component E4184_22505 PF07663 Sorbitol phosphotransferase enzyme II C-terminus E4184_22505 PF03612 Sorbitol phosphotransferase enzyme II N-terminus E4184_22510 PF03608 PTS system enzyme II sorbitol-specific factor E4184_22525 PF00923 Transaldolase/Fructose-6-phosphate aldolase E4184_22530 PF00342 Phosphoglucose isomerase E4184_22535 PF13419 Haloacid dehalogenase-like hydrolase E4184_22555 PF13737 Transposase DDE domain E4184_22560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4184_22560 PF12793 Sugar transport-related sRNA regulator N-term E4184_22595 PF18623 TnsE C-terminal domain E4184_22600 PF15978 Tn7-like transposition protein D E4184_22600 PF06527 TniQ E4184_22605 PF13401 AAA domain E4184_22605 PF11426 Tn7 transposition regulator TnsC E4184_22610 PF00665 Integrase core domain E4184_22615 PF08722 TnsA endonuclease N terminal E4184_22615 PF08721 TnsA endonuclease C terminal E4184_22620 PF01380 SIS domain E4184_22625 PF00455 DeoR C terminal sensor domain E4184_22625 PF08220 DeoR-like helix-turn-helix domain E4184_22630 PF00486 Transcriptional regulatory protein, C terminal E4184_22630 PF00072 Response regulator receiver domain E4184_22635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4184_22635 PF00512 His Kinase A (phospho-acceptor) domain E4184_22635 PF00672 HAMP domain E4184_22640 PF00905 Penicillin binding protein transpeptidase domain E4184_22645 PF06123 Inner membrane protein CreD E4184_22650 PF14602 Hexapeptide repeat of succinyl-transferase E4184_22650 PF00132 Bacterial transferase hexapeptide (six repeats) E4184_22650 PF12804 MobA-like NTP transferase domain E4184_22655 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain E4184_22655 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain E4184_22660 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4184_22660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4184_22665 PF00231 ATP synthase E4184_22670 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4184_22670 PF00306 ATP synthase alpha/beta chain, C terminal domain E4184_22670 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4184_22675 PF00213 ATP synthase delta (OSCP) subunit E4184_22680 PF00430 ATP synthase B/B' CF(0) E4184_22685 PF00137 ATP synthase subunit C E4184_22690 PF00119 ATP synthase A chain E4184_22700 PF17762 HTH domain found in ParB protein E4184_22700 PF02195 ParB-like nuclease domain E4184_22705 PF13614 AAA domain E4184_22710 PF02527 rRNA small subunit methyltransferase G E4184_22715 PF01134 Glucose inhibited division protein A E4184_22715 PF13932 GidA associated domain E4184_22720 PF00258 Flavodoxin E4184_22725 PF00593 TonB dependent receptor E4184_22725 PF07715 TonB-dependent Receptor Plug Domain E4184_22730 PF00005 ABC transporter E4184_22735 PF00005 ABC transporter E4184_22740 PF01497 Periplasmic binding protein E4184_22745 PF01032 FecCD transport family E4184_22750 PF13657 HipA N-terminal domain E4184_22750 PF07804 HipA-like C-terminal domain E4184_22765 PF04851 Type III restriction enzyme, res subunit E4184_22765 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) E4184_22765 PF00271 Helicase conserved C-terminal domain E4184_22765 PF08463 EcoEI R protein C-terminal E4184_22770 PF02384 N-6 DNA Methylase E4184_22770 PF12161 HsdM N-terminal domain E4184_22775 PF01420 Type I restriction modification DNA specificity domain E4184_22790 PF13592 Winged helix-turn helix E4184_22790 PF13358 DDE superfamily endonuclease E4184_22835 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) E4184_22835 PF01348 Type II intron maturase E4184_22840 PF02371 Transposase IS116/IS110/IS902 family E4184_22840 PF01548 Transposase E4184_22845 PF02796 Helix-turn-helix domain of resolvase E4184_22845 PF00239 Resolvase, N terminal domain E4184_22880 PF13700 Domain of unknown function (DUF4158) E4184_22880 PF01526 Tn3 transposase DDE domain E4184_22885 PF02371 Transposase IS116/IS110/IS902 family E4184_22885 PF01548 Transposase E4184_22890 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) E4184_22895 PF01609 Transposase DDE domain E4184_22905 PF01609 Transposase DDE domain E4184_22930 PF13438 Domain of unknown function (DUF4113) E4184_22930 PF11799 impB/mucB/samB family C-terminal domain E4184_22930 PF00817 impB/mucB/samB family E4184_22935 PF00717 Peptidase S24-like E4184_22945 PF02384 N-6 DNA Methylase E4184_22950 PF01420 Type I restriction modification DNA specificity domain E4184_22980 PF01272 Transcription elongation factor, GreA/GreB, C-term E4184_22980 PF03449 Transcription elongation factor, N-terminal E4184_23000 PF00589 Phage integrase family E4184_23000 PF02899 Phage integrase, N-terminal SAM-like domain E4184_23005 PF01926 50S ribosome-binding GTPase E4184_23005 PF12631 MnmE helical domain E4184_23005 PF10396 GTP-binding protein TrmE N-terminus E4184_23010 PF02096 60Kd inner membrane protein E4184_23010 PF14849 YidC periplasmic domain E4184_23015 PF01809 Putative membrane protein insertion efficiency factor E4184_23020 PF00825 Ribonuclease P E4184_23025 PF00468 Ribosomal protein L34 E4184_23035 PF00528 Binding-protein-dependent transport system inner membrane component E4184_23040 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4184_23055 PF01022 Bacterial regulatory protein, arsR family