locus-tag class description IBG34_00025 PF00313 'Cold-shock' DNA-binding domain IBG34_00090 PF02472 Biopolymer transport protein ExbD/TolR IBG34_00095 PF01618 MotA/TolQ/ExbB proton channel family IBG34_00100 PF01618 MotA/TolQ/ExbB proton channel family IBG34_00115 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_00120 PF12911 N-terminal TM domain of oligopeptide transport permease C IBG34_00120 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_00125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IBG34_00130 PF00005 ABC transporter IBG34_00130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IBG34_00135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IBG34_00135 PF00005 ABC transporter IBG34_00140 PF01546 Peptidase family M20/M25/M40 IBG34_00140 PF07687 Peptidase dimerisation domain IBG34_00145 PF00156 Phosphoribosyl transferase domain IBG34_00150 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) IBG34_00155 PF07417 Sigma factor-binding transcriptional regulator Crl IBG34_00160 PF00696 Amino acid kinase family IBG34_00160 PF01472 PUA domain IBG34_00175 PF00582 Universal stress protein family IBG34_00195 PF10414 Sirohaem synthase dimerisation region IBG34_00195 PF14824 Sirohaem biosynthesis protein central IBG34_00195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IBG34_00205 PF00005 ABC transporter IBG34_00210 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_00215 PF00005 ABC transporter IBG34_00225 PF18267 Rubredoxin NAD+ reductase C-terminal domain IBG34_00225 PF13806 Rieske-like [2Fe-2S] domain IBG34_00225 PF07992 Pyridine nucleotide-disulphide oxidoreductase IBG34_00225 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IBG34_00225 PF04324 BFD-like [2Fe-2S] binding domain IBG34_00225 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IBG34_00230 PF00294 pfkB family carbohydrate kinase IBG34_00235 PF04227 Indigoidine synthase A like protein IBG34_00240 PF13358 DDE superfamily endonuclease IBG34_00240 PF13592 Winged helix-turn helix IBG34_00245 PF00194 Eukaryotic-type carbonic anhydrase IBG34_00255 PF13808 DDE_Tnp_1-associated IBG34_00255 PF01609 Transposase DDE domain IBG34_00260 PF00034 Cytochrome c IBG34_00260 PF03150 Di-haem cytochrome c peroxidase IBG34_00275 PF00994 Probable molybdopterin binding domain IBG34_00285 PF06738 Putative threonine/serine exporter IBG34_00290 PF12821 Threonine/Serine exporter, ThrE IBG34_00295 PF00186 Dihydrofolate reductase IBG34_00305 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_00315 PF01507 Phosphoadenosine phosphosulfate reductase family IBG34_00320 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IBG34_00320 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IBG34_00325 PF00667 FAD binding domain IBG34_00325 PF00258 Flavodoxin IBG34_00325 PF00175 Oxidoreductase NAD-binding domain IBG34_00335 PF00152 tRNA synthetases class II (D, K and N) IBG34_00335 PF01336 OB-fold nucleic acid binding domain IBG34_00345 PF02743 Cache domain IBG34_00345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_00345 PF00672 HAMP domain IBG34_00350 PF03616 Sodium/glutamate symporter IBG34_00360 PF07023 Protein of unknown function (DUF1315) IBG34_00365 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IBG34_00365 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IBG34_00385 PF01343 Peptidase family S49 IBG34_00395 PF00881 Nitroreductase family IBG34_00400 PF14602 Hexapeptide repeat of succinyl-transferase IBG34_00400 PF12464 Maltose acetyltransferase IBG34_00410 PF00107 Zinc-binding dehydrogenase IBG34_00410 PF08240 Alcohol dehydrogenase GroES-like domain IBG34_00415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_00415 PF03466 LysR substrate binding domain IBG34_00425 PF00474 Sodium:solute symporter family IBG34_00430 PF06196 Protein of unknown function (DUF997) IBG34_00435 PF02785 Biotin carboxylase C-terminal domain IBG34_00435 PF00289 Biotin carboxylase, N-terminal domain IBG34_00435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IBG34_00440 PF00364 Biotin-requiring enzyme IBG34_00445 PF01220 Dehydroquinase class II IBG34_00465 PF02613 Nitrate reductase delta subunit IBG34_00470 PF00384 Molybdopterin oxidoreductase IBG34_00470 PF18364 Molybdopterin oxidoreductase N-terminal domain IBG34_00470 PF01568 Molydopterin dinucleotide binding domain IBG34_00475 PF03264 NapC/NirT cytochrome c family, N-terminal region IBG34_00480 PF00072 Response regulator receiver domain IBG34_00480 PF00486 Transcriptional regulatory protein, C terminal IBG34_00500 PF00464 Serine hydroxymethyltransferase IBG34_00505 PF03477 ATP cone domain IBG34_00510 PF01872 RibD C-terminal domain IBG34_00510 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IBG34_00515 PF00677 Lumazine binding domain IBG34_00520 PF00925 GTP cyclohydrolase II IBG34_00520 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IBG34_00525 PF00885 6,7-dimethyl-8-ribityllumazine synthase IBG34_00530 PF01029 NusB family IBG34_00535 PF02769 AIR synthase related protein, C-terminal domain IBG34_00535 PF00586 AIR synthase related protein, N-terminal domain IBG34_00540 PF04608 Phosphatidylglycerophosphatase A IBG34_00545 PF00005 ABC transporter IBG34_00545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IBG34_00550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IBG34_00555 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_00560 PF12911 N-terminal TM domain of oligopeptide transport permease C IBG34_00560 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_00570 PF00348 Polyprenyl synthetase IBG34_00575 PF02609 Exonuclease VII small subunit IBG34_00580 PF01618 MotA/TolQ/ExbB proton channel family IBG34_00585 PF13677 Membrane MotB of proton-channel complex MotA/MotB IBG34_00585 PF00691 OmpA family IBG34_00590 PF04972 BON domain IBG34_00600 PF00005 ABC transporter IBG34_00600 PF03459 TOBE domain IBG34_00620 PF09557 Domain of unknown function (DUF2382) IBG34_00620 PF05239 PRC-barrel domain IBG34_00625 PF03449 Transcription elongation factor, N-terminal IBG34_00625 PF01272 Transcription elongation factor, GreA/GreB, C-term IBG34_00635 PF01985 CRS1 / YhbY (CRM) domain IBG34_00645 PF06480 FtsH Extracellular IBG34_00645 PF17862 AAA+ lid domain IBG34_00645 PF00004 ATPase family associated with various cellular activities (AAA) IBG34_00645 PF01434 Peptidase family M41 IBG34_00650 PF00809 Pterin binding enzyme IBG34_00655 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IBG34_00655 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IBG34_00655 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IBG34_00655 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IBG34_00660 PF00121 Triosephosphate isomerase IBG34_00665 PF03840 Preprotein translocase SecG subunit IBG34_00680 PF17384 RimP C-terminal SH3 domain IBG34_00680 PF02576 RimP N-terminal domain IBG34_00685 PF13184 NusA-like KH domain IBG34_00685 PF00575 S1 RNA binding domain IBG34_00685 PF08529 NusA N-terminal domain IBG34_00690 PF04760 Translation initiation factor IF-2, N-terminal region IBG34_00690 PF08364 Bacterial translation initiation factor IF-2 associated region IBG34_00690 PF11987 Translation-initiation factor 2 IBG34_00690 PF00009 Elongation factor Tu GTP binding domain IBG34_00695 PF02033 Ribosome-binding factor A IBG34_00700 PF01509 TruB family pseudouridylate synthase (N terminal domain) IBG34_00700 PF16198 tRNA pseudouridylate synthase B C-terminal domain IBG34_00700 PF09157 Pseudouridine synthase II TruB, C-terminal IBG34_00705 PF00312 Ribosomal protein S15 IBG34_00710 PF00013 KH domain IBG34_00710 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IBG34_00710 PF01138 3' exoribonuclease family, domain 1 IBG34_00710 PF03725 3' exoribonuclease family, domain 2 IBG34_00710 PF00575 S1 RNA binding domain IBG34_00720 PF02635 DsrE/DsrF-like family IBG34_00730 PF12838 4Fe-4S dicluster domain IBG34_00735 PF16325 Peptidase family U32 C-terminal domain IBG34_00735 PF01136 Peptidase family U32 IBG34_00740 PF17969 L,D-transpeptidase C-terminal domain IBG34_00740 PF03734 L,D-transpeptidase catalytic domain IBG34_00750 PF01523 Putative modulator of DNA gyrase IBG34_00760 PF01609 Transposase DDE domain IBG34_00770 PF00258 Flavodoxin IBG34_00775 PF00589 Phage integrase family IBG34_00775 PF02899 Phage integrase, N-terminal SAM-like domain IBG34_00780 PF01741 Large-conductance mechanosensitive channel, MscL IBG34_00790 PF01368 DHH family IBG34_00790 PF02272 DHHA1 domain IBG34_00790 PF17768 RecJ OB domain IBG34_00795 PF13411 MerR HTH family regulatory protein IBG34_00800 PF00583 Acetyltransferase (GNAT) family IBG34_00810 PF02508 Rnf-Nqr subunit, membrane protein IBG34_00820 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IBG34_00820 PF04055 Radical SAM superfamily IBG34_00825 PF03099 Biotin/lipoate A/B protein ligase family IBG34_00830 PF04359 Protein of unknown function (DUF493) IBG34_00835 PF07943 Penicillin-binding protein 5, C-terminal domain IBG34_00835 PF00768 D-alanyl-D-alanine carboxypeptidase IBG34_00840 PF03330 Lytic transglycolase IBG34_00840 PF05036 Sporulation related domain IBG34_00845 PF13406 Transglycosylase SLT domain IBG34_00860 PF03717 Penicillin-binding Protein dimerisation domain IBG34_00860 PF00905 Penicillin binding protein transpeptidase domain IBG34_00865 PF02590 Predicted SPOUT methyltransferase IBG34_00875 PF01467 Cytidylyltransferase-like IBG34_00890 PF08264 Anticodon-binding domain of tRNA IBG34_00890 PF00133 tRNA synthetases class I (I, L, M and V) IBG34_00890 PF13603 Leucyl-tRNA synthetase, Domain 2 IBG34_00900 PF00795 Carbon-nitrogen hydrolase IBG34_00905 PF00571 CBS domain IBG34_00905 PF03471 Transporter associated domain IBG34_00910 PF02130 Uncharacterized protein family UPF0054 IBG34_00915 PF02562 PhoH-like protein IBG34_00920 PF04055 Radical SAM superfamily IBG34_00920 PF01938 TRAM domain IBG34_00920 PF00919 Uncharacterized protein family UPF0004 IBG34_00925 PF01494 FAD binding domain IBG34_00940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_00940 PF03466 LysR substrate binding domain IBG34_00950 PF13419 Haloacid dehalogenase-like hydrolase IBG34_00970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IBG34_00970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IBG34_00985 PF01132 Elongation factor P (EF-P) OB domain IBG34_00985 PF08207 Elongation factor P (EF-P) KOW-like domain IBG34_00985 PF09285 Elongation factor P, C-terminal IBG34_00995 PF00478 IMP dehydrogenase / GMP reductase domain IBG34_01005 PF08521 Two-component sensor kinase N-terminal IBG34_01005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_01005 PF00512 His Kinase A (phospho-acceptor) domain IBG34_01010 PF00072 Response regulator receiver domain IBG34_01010 PF00486 Transcriptional regulatory protein, C terminal IBG34_01020 PF00106 short chain dehydrogenase IBG34_01030 PF00501 AMP-binding enzyme IBG34_01040 PF13649 Methyltransferase domain IBG34_01050 PF02313 Fumarate reductase subunit D IBG34_01055 PF02300 Fumarate reductase subunit C IBG34_01060 PF13085 2Fe-2S iron-sulfur cluster binding domain IBG34_01060 PF13183 4Fe-4S dicluster domain IBG34_01065 PF00890 FAD binding domain IBG34_01065 PF02910 Fumarate reductase flavoprotein C-term IBG34_01085 PF00924 Mechanosensitive ion channel IBG34_01085 PF12795 Mechanosensitive ion channel porin domain IBG34_01085 PF12794 Mechanosensitive ion channel inner membrane domain 1 IBG34_01090 PF01554 MatE IBG34_01095 PF08525 Opacity-associated protein A N-terminal motif IBG34_01095 PF01551 Peptidase family M23 IBG34_01095 PF01476 LysM domain IBG34_01105 PF02753 Pili assembly chaperone PapD, C-terminal domain IBG34_01105 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IBG34_01130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_01130 PF03466 LysR substrate binding domain IBG34_01145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_01145 PF03466 LysR substrate binding domain IBG34_01150 PF00912 Transglycosylase IBG34_01150 PF17092 Penicillin-binding protein OB-like domain IBG34_01150 PF00905 Penicillin binding protein transpeptidase domain IBG34_01155 PF11104 Type IV pilus assembly protein PilM; IBG34_01165 PF04350 Pilus assembly protein, PilO IBG34_01175 PF03958 Bacterial type II/III secretion system short domain IBG34_01175 PF07660 Secretin and TonB N terminus short domain IBG34_01175 PF11741 AMIN domain IBG34_01175 PF00263 Bacterial type II and III secretion system protein IBG34_01180 PF01202 Shikimate kinase IBG34_01185 PF01761 3-dehydroquinate synthase IBG34_01195 PF02086 D12 class N6 adenine-specific DNA methyltransferase IBG34_01200 PF00834 Ribulose-phosphate 3 epimerase family IBG34_01205 PF13419 Haloacid dehalogenase-like hydrolase IBG34_01210 PF00579 tRNA synthetases class I (W and Y) IBG34_01225 PF00202 Aminotransferase class-III IBG34_01230 PF04958 Arginine N-succinyltransferase beta subunit IBG34_01235 PF00171 Aldehyde dehydrogenase family IBG34_01245 PF13419 Haloacid dehalogenase-like hydrolase IBG34_01275 PF07859 alpha/beta hydrolase fold IBG34_01280 PF04266 ASCH domain IBG34_01285 PF03600 Citrate transporter IBG34_01285 PF02080 TrkA-C domain IBG34_01330 PF01926 50S ribosome-binding GTPase IBG34_01330 PF06071 Protein of unknown function (DUF933) IBG34_01340 PF01195 Peptidyl-tRNA hydrolase IBG34_01345 PF02872 5'-nucleotidase, C-terminal domain IBG34_01345 PF00149 Calcineurin-like phosphoesterase IBG34_01350 PF14572 Phosphoribosyl synthetase-associated domain IBG34_01350 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IBG34_01360 PF08544 GHMP kinases C terminal IBG34_01360 PF00288 GHMP kinases N terminal domain IBG34_01365 PF03550 Outer membrane lipoprotein LolB IBG34_01370 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IBG34_01370 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IBG34_01370 PF01488 Shikimate / quinate 5-dehydrogenase IBG34_01375 PF03462 PCRF domain IBG34_01375 PF00472 RF-1 domain IBG34_01380 PF13847 Methyltransferase domain IBG34_01380 PF17827 PrmC N-terminal domain IBG34_01390 PF13369 Transglutaminase-like superfamily IBG34_01405 PF01228 Glycine radical IBG34_01410 PF03167 Uracil DNA glycosylase superfamily IBG34_01425 PF00923 Transaldolase/Fructose-6-phosphate aldolase IBG34_01430 PF01235 Sodium:alanine symporter family IBG34_01435 PF00144 Beta-lactamase IBG34_01440 PF07690 Major Facilitator Superfamily IBG34_01445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_01445 PF03466 LysR substrate binding domain IBG34_01450 PF03652 Holliday junction resolvase IBG34_01460 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IBG34_01460 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IBG34_01465 PF04452 RNA methyltransferase IBG34_01470 PF04231 Endonuclease I IBG34_01475 PF10263 SprT-like family IBG34_01475 PF17283 SprT-like zinc ribbon domain IBG34_01480 PF02773 S-adenosylmethionine synthetase, C-terminal domain IBG34_01480 PF02772 S-adenosylmethionine synthetase, central domain IBG34_01480 PF00438 S-adenosylmethionine synthetase, N-terminal domain IBG34_01485 PF02780 Transketolase, C-terminal domain IBG34_01485 PF00456 Transketolase, thiamine diphosphate binding domain IBG34_01485 PF02779 Transketolase, pyrimidine binding domain IBG34_01515 PF00583 Acetyltransferase (GNAT) family IBG34_01530 PF01551 Peptidase family M23 IBG34_01530 PF08525 Opacity-associated protein A N-terminal motif IBG34_01530 PF01476 LysM domain IBG34_01535 PF00579 tRNA synthetases class I (W and Y) IBG34_01555 PF00709 Adenylosuccinate synthetase IBG34_01560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_01560 PF03466 LysR substrate binding domain IBG34_01580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_01580 PF03466 LysR substrate binding domain IBG34_01585 PF00106 short chain dehydrogenase IBG34_01590 PF08496 Peptidase family S49 N-terminal IBG34_01590 PF01343 Peptidase family S49 IBG34_01595 PF04996 Succinylarginine dihydrolase IBG34_01600 PF08272 Topoisomerase I zinc-ribbon-like IBG34_01600 PF01131 DNA topoisomerase IBG34_01600 PF01751 Toprim domain IBG34_01600 PF01396 Topoisomerase DNA binding C4 zinc finger IBG34_01615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_01615 PF08447 PAS fold IBG34_01635 PF00005 ABC transporter IBG34_01635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IBG34_01640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IBG34_01640 PF00005 ABC transporter IBG34_01655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IBG34_01665 PF11647 Membrane Localization Domain IBG34_01665 PF07634 RtxA repeat IBG34_01665 PF16671 Actin cross-linking domain IBG34_01665 PF12146 Serine aminopeptidase, S33 IBG34_01665 PF11713 Peptidase C80 family IBG34_01675 PF18693 TRAM domain IBG34_01675 PF00919 Uncharacterized protein family UPF0004 IBG34_01675 PF04055 Radical SAM superfamily IBG34_01695 PF02049 Flagellar hook-basal body complex protein FliE IBG34_01700 PF08345 Flagellar M-ring protein C-terminal IBG34_01700 PF01514 Secretory protein of YscJ/FliF family IBG34_01705 PF01706 FliG C-terminal domain IBG34_01705 PF14841 FliG middle domain IBG34_01705 PF14842 FliG N-terminal domain IBG34_01715 PF18269 T3SS EscN ATPase C-terminal domain IBG34_01715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IBG34_01735 PF02154 Flagellar motor switch protein FliM IBG34_01735 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IBG34_01740 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IBG34_01750 PF00813 FliP family IBG34_01755 PF01313 Bacterial export proteins, family 3 IBG34_01770 PF00771 FHIPEP family IBG34_01775 PF00448 SRP54-type protein, GTPase domain IBG34_01780 PF10609 NUBPL iron-transfer P-loop NTPase IBG34_01785 PF04545 Sigma-70, region 4 IBG34_01785 PF04539 Sigma-70 region 3 IBG34_01785 PF04542 Sigma-70 region 2 IBG34_01790 PF00072 Response regulator receiver domain IBG34_01795 PF04344 Chemotaxis phosphatase, CheZ IBG34_01805 PF01339 CheB methylesterase IBG34_01805 PF00072 Response regulator receiver domain IBG34_01815 PF13677 Membrane MotB of proton-channel complex MotA/MotB IBG34_01815 PF00691 OmpA family IBG34_01820 PF13614 AAA domain IBG34_01830 PF01584 CheW-like domain IBG34_01840 PF00005 ABC transporter IBG34_01845 PF03379 CcmB protein IBG34_01850 PF01578 Cytochrome C assembly protein IBG34_01855 PF04995 Heme exporter protein D (CcmD) IBG34_01860 PF03100 CcmE IBG34_01870 PF08534 Redoxin IBG34_01875 PF03918 Cytochrome C biogenesis protein IBG34_01885 PF04333 MlaA lipoprotein IBG34_01890 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IBG34_01890 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IBG34_01895 PF00462 Glutaredoxin IBG34_01900 PF01029 NusB family IBG34_01900 PF01189 16S rRNA methyltransferase RsmB/F IBG34_01915 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IBG34_01915 PF01243 Pyridoxamine 5'-phosphate oxidase IBG34_01930 PF01546 Peptidase family M20/M25/M40 IBG34_01950 PF13508 Acetyltransferase (GNAT) domain IBG34_01975 PF11799 impB/mucB/samB family C-terminal domain IBG34_01975 PF11798 IMS family HHH motif IBG34_01975 PF13438 Domain of unknown function (DUF4113) IBG34_01975 PF00817 impB/mucB/samB family IBG34_01980 PF00717 Peptidase S24-like IBG34_02010 PF13356 Arm DNA-binding domain IBG34_02010 PF00589 Phage integrase family IBG34_02020 PF01668 SmpB protein IBG34_02025 PF03364 Polyketide cyclase / dehydrase and lipid transport IBG34_02030 PF03658 RnfH family Ubiquitin IBG34_02035 PF13460 NAD(P)H-binding IBG34_02040 PF04355 SmpA / OmlA family IBG34_02045 PF00465 Iron-containing alcohol dehydrogenase IBG34_02050 PF01048 Phosphorylase superfamily IBG34_02055 PF00849 RNA pseudouridylate synthase IBG34_02060 PF01156 Inosine-uridine preferring nucleoside hydrolase IBG34_02075 PF07509 Protein of unknown function (DUF1523) IBG34_02080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_02080 PF00672 HAMP domain IBG34_02080 PF12729 Four helix bundle sensory module for signal transduction IBG34_02085 PF01810 LysE type translocator IBG34_02095 PF03471 Transporter associated domain IBG34_02095 PF02080 TrkA-C domain IBG34_02095 PF00999 Sodium/hydrogen exchanger family IBG34_02105 PF02557 D-alanyl-D-alanine carboxypeptidase IBG34_02110 PF01546 Peptidase family M20/M25/M40 IBG34_02110 PF07687 Peptidase dimerisation domain IBG34_02115 PF03960 ArsC family IBG34_02125 PF03606 C4-dicarboxylate anaerobic carrier IBG34_02130 PF07687 Peptidase dimerisation domain IBG34_02130 PF01546 Peptidase family M20/M25/M40 IBG34_02160 PF00202 Aminotransferase class-III IBG34_02165 PF06968 Biotin and Thiamin Synthesis associated domain IBG34_02165 PF04055 Radical SAM superfamily IBG34_02170 PF00155 Aminotransferase class I and II IBG34_02175 PF08241 Methyltransferase domain IBG34_02175 PF12697 Alpha/beta hydrolase family IBG34_02185 PF01435 Peptidase family M48 IBG34_02195 PF07992 Pyridine nucleotide-disulphide oxidoreductase IBG34_02195 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IBG34_02195 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IBG34_02205 PF04325 Protein of unknown function (DUF465) IBG34_02215 PF01554 MatE IBG34_02235 PF00291 Pyridoxal-phosphate dependent enzyme IBG34_02250 PF08359 YsiA-like protein, C-terminal region IBG34_02250 PF00440 Bacterial regulatory proteins, tetR family IBG34_02265 PF00877 NlpC/P60 family IBG34_02270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_02270 PF03466 LysR substrate binding domain IBG34_02290 PF08003 Protein of unknown function (DUF1698) IBG34_02295 PF13649 Methyltransferase domain IBG34_02300 PF01904 Protein of unknown function DUF72 IBG34_02305 PF02938 GAD domain IBG34_02305 PF00152 tRNA synthetases class II (D, K and N) IBG34_02305 PF01336 OB-fold nucleic acid binding domain IBG34_02310 PF01709 Transcriptional regulator IBG34_02315 PF00884 Sulfatase IBG34_02315 PF08019 Phosphoethanolamine transferase EptA/EptB IBG34_02320 PF00480 ROK family IBG34_02320 PF01047 MarR family IBG34_02325 PF01979 Amidohydrolase family IBG34_02330 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IBG34_02335 PF00367 phosphotransferase system, EIIB IBG34_02335 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IBG34_02335 PF02378 Phosphotransferase system, EIIC IBG34_02340 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain IBG34_02340 PF00728 Glycosyl hydrolase family 20, catalytic domain IBG34_02340 PF03173 Putative carbohydrate binding domain IBG34_02340 PF02838 Glycosyl hydrolase family 20, domain 2 IBG34_02360 PF00111 2Fe-2S iron-sulfur cluster binding domain IBG34_02360 PF01799 [2Fe-2S] binding domain IBG34_02375 PF00749 tRNA synthetases class I (E and Q), catalytic domain IBG34_02375 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IBG34_02380 PF01475 Ferric uptake regulator family IBG34_02390 PF00258 Flavodoxin IBG34_02395 PF01402 Ribbon-helix-helix protein, copG family IBG34_02405 PF00561 alpha/beta hydrolase fold IBG34_02410 PF03925 SeqA protein C-terminal domain IBG34_02410 PF17206 SeqA protein N-terminal domain IBG34_02415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IBG34_02415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IBG34_02415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IBG34_02415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IBG34_02425 PF12802 MarR family IBG34_02430 PF13406 Transglycosylase SLT domain IBG34_02435 PF01066 CDP-alcohol phosphatidyltransferase IBG34_02440 PF00005 ABC transporter IBG34_02450 PF13416 Bacterial extracellular solute-binding protein IBG34_02455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IBG34_02455 PF07992 Pyridine nucleotide-disulphide oxidoreductase IBG34_02455 PF00403 Heavy-metal-associated domain IBG34_02460 PF02627 Carboxymuconolactone decarboxylase family IBG34_02480 PF17243 POTRA domain TamA domain 1 IBG34_02480 PF07244 Surface antigen variable number repeat IBG34_02480 PF01103 Surface antigen IBG34_02485 PF04357 TamB, inner membrane protein subunit of TAM complex IBG34_02505 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IBG34_02540 PF03372 Endonuclease/Exonuclease/phosphatase family IBG34_02545 PF01464 Transglycosylase SLT domain IBG34_02545 PF01476 LysM domain IBG34_02550 PF00753 Metallo-beta-lactamase superfamily IBG34_02550 PF16123 Hydroxyacylglutathione hydrolase C-terminus IBG34_02555 PF08241 Methyltransferase domain IBG34_02560 PF00075 RNase H IBG34_02565 PF00929 Exonuclease IBG34_02580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IBG34_02580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IBG34_02580 PF09317 Domain of unknown function (DUF1974) IBG34_02580 PF02770 Acyl-CoA dehydrogenase, middle domain IBG34_02585 PF13580 SIS domain IBG34_02590 PF13230 Glutamine amidotransferases class-II IBG34_02600 PF01933 Uncharacterised protein family UPF0052 IBG34_02610 PF00672 HAMP domain IBG34_02610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_02610 PF00512 His Kinase A (phospho-acceptor) domain IBG34_02610 PF01627 Hpt domain IBG34_02610 PF00072 Response regulator receiver domain IBG34_02610 PF17149 Periplasmic sensor domain found in signal transduction proteins IBG34_02625 PF00196 Bacterial regulatory proteins, luxR family IBG34_02625 PF00072 Response regulator receiver domain IBG34_02630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_02630 PF07730 Histidine kinase IBG34_02630 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IBG34_02630 PF00672 HAMP domain IBG34_02650 PF01568 Molydopterin dinucleotide binding domain IBG34_02650 PF00384 Molybdopterin oxidoreductase IBG34_02650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IBG34_02650 PF10518 TAT (twin-arginine translocation) pathway signal sequence IBG34_02655 PF12800 4Fe-4S binding domain IBG34_02655 PF12838 4Fe-4S dicluster domain IBG34_02660 PF13237 4Fe-4S dicluster domain IBG34_02660 PF12801 4Fe-4S binding domain IBG34_02665 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) IBG34_02670 PF03264 NapC/NirT cytochrome c family, N-terminal region IBG34_02675 PF00994 Probable molybdopterin binding domain IBG34_02680 PF01967 MoaC family IBG34_02685 PF02597 ThiS family IBG34_02690 PF02391 MoaE protein IBG34_02705 PF00005 ABC transporter IBG34_02705 PF03459 TOBE domain IBG34_02710 PF00561 alpha/beta hydrolase fold IBG34_02715 PF00899 ThiF family IBG34_02720 PF03453 MoeA N-terminal region (domain I and II) IBG34_02720 PF03454 MoeA C-terminal region (domain IV) IBG34_02720 PF00994 Probable molybdopterin binding domain IBG34_02725 PF01227 GTP cyclohydrolase I IBG34_02730 PF17200 Single Cache domain 2 IBG34_02730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_02730 PF00672 HAMP domain IBG34_02745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_02745 PF03466 LysR substrate binding domain IBG34_02750 PF04264 YceI-like domain IBG34_02760 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IBG34_02760 PF05221 S-adenosyl-L-homocysteine hydrolase IBG34_02775 PF07687 Peptidase dimerisation domain IBG34_02775 PF01546 Peptidase family M20/M25/M40 IBG34_02780 PF17944 Arginine decarboxylase C-terminal helical extension IBG34_02780 PF17810 Arginine decarboxylase helical bundle domain IBG34_02780 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IBG34_02805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IBG34_02820 PF00849 RNA pseudouridylate synthase IBG34_02820 PF01479 S4 domain IBG34_02835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_02835 PF03466 LysR substrate binding domain IBG34_02845 PF10689 Protein of unknown function (DUF2496) IBG34_02865 PF04391 Protein of unknown function (DUF533) IBG34_02875 PF00155 Aminotransferase class I and II IBG34_02875 PF00392 Bacterial regulatory proteins, gntR family IBG34_02880 PF01654 Cytochrome bd terminal oxidase subunit I IBG34_02885 PF02322 Cytochrome bd terminal oxidase subunit II IBG34_02895 PF07690 Major Facilitator Superfamily IBG34_02900 PF00248 Aldo/keto reductase family IBG34_02925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_02925 PF03466 LysR substrate binding domain IBG34_02930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IBG34_02930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IBG34_02935 PF00230 Major intrinsic protein IBG34_02940 PF07690 Major Facilitator Superfamily IBG34_02945 PF08220 DeoR-like helix-turn-helix domain IBG34_02945 PF00455 DeoR C terminal sensor domain IBG34_02950 PF01266 FAD dependent oxidoreductase IBG34_02950 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IBG34_02955 PF03009 Glycerophosphoryl diester phosphodiesterase family IBG34_02960 PF00793 DAHP synthetase I family IBG34_02965 PF01817 Chorismate mutase type II IBG34_02965 PF02153 Prephenate dehydrogenase IBG34_02970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_02970 PF03466 LysR substrate binding domain IBG34_02975 PF04219 Protein of unknown function, DUF IBG34_02980 PF03974 Ecotin IBG34_03000 PF00326 Prolyl oligopeptidase family IBG34_03000 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IBG34_03010 PF11893 Domain of unknown function (DUF3413) IBG34_03010 PF00884 Sulfatase IBG34_03015 PF07208 Protein of unknown function (DUF1414) IBG34_03020 PF04245 37-kD nucleoid-associated bacterial protein IBG34_03025 PF01547 Bacterial extracellular solute-binding protein IBG34_03035 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_03040 PF00005 ABC transporter IBG34_03040 PF08402 TOBE domain IBG34_03050 PF00561 alpha/beta hydrolase fold IBG34_03060 PF01594 AI-2E family transporter IBG34_03065 PF01206 Sulfurtransferase TusA IBG34_03070 PF13181 Tetratricopeptide repeat IBG34_03070 PF01435 Peptidase family M48 IBG34_03075 PF00578 AhpC/TSA family IBG34_03100 PF00497 Bacterial extracellular solute-binding proteins, family 3 IBG34_03110 PF03956 Lysine exporter LysO IBG34_03115 PF00005 ABC transporter IBG34_03120 PF00497 Bacterial extracellular solute-binding proteins, family 3 IBG34_03130 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_03140 PF04055 Radical SAM superfamily IBG34_03145 PF00563 EAL domain IBG34_03145 PF00990 Diguanylate cyclase, GGDEF domain IBG34_03145 PF03707 Bacterial signalling protein N terminal repeat IBG34_03165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IBG34_03165 PF00529 HlyD membrane-fusion protein of T1SS IBG34_03170 PF02321 Outer membrane efflux protein IBG34_03185 PF05598 Transposase domain (DUF772) IBG34_03185 PF01609 Transposase DDE domain IBG34_03205 PF02568 Thiamine biosynthesis protein (ThiI) IBG34_03205 PF02926 THUMP domain IBG34_03215 PF03458 UPF0126 domain IBG34_03220 PF00700 Bacterial flagellin C-terminal helical region IBG34_03220 PF07196 Flagellin hook IN motif IBG34_03220 PF00669 Bacterial flagellin N-terminal helical region IBG34_03225 PF03646 FlaG protein IBG34_03230 PF07196 Flagellin hook IN motif IBG34_03230 PF07195 Flagellar hook-associated protein 2 C-terminus IBG34_03230 PF02465 Flagellar hook-associated protein 2 N-terminus IBG34_03235 PF02561 Flagellar protein FliS IBG34_03265 PF01048 Phosphorylase superfamily IBG34_03275 PF02535 ZIP Zinc transporter IBG34_03280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_03280 PF00672 HAMP domain IBG34_03280 PF12729 Four helix bundle sensory module for signal transduction IBG34_03285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IBG34_03290 PF00633 Helix-hairpin-helix motif IBG34_03290 PF00730 HhH-GPD superfamily base excision DNA repair protein IBG34_03290 PF10576 Iron-sulfur binding domain of endonuclease III IBG34_03300 PF04205 FMN-binding domain IBG34_03305 PF03116 NQR2, RnfD, RnfE family IBG34_03315 PF04060 Putative Fe-S cluster IBG34_03320 PF02508 Rnf-Nqr subunit, membrane protein IBG34_03335 PF08447 PAS fold IBG34_03335 PF13426 PAS domain IBG34_03335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_03345 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase IBG34_03345 PF12241 Trans-2-enoyl-CoA reductase catalytic region IBG34_03345 PF07055 Enoyl reductase FAD binding domain IBG34_03365 PF00462 Glutaredoxin IBG34_03380 PF00529 HlyD membrane-fusion protein of T1SS IBG34_03380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IBG34_03385 PF11742 Protein of unknown function (DUF3302) IBG34_03390 PF12795 Mechanosensitive ion channel porin domain IBG34_03390 PF00924 Mechanosensitive ion channel IBG34_03390 PF12794 Mechanosensitive ion channel inner membrane domain 1 IBG34_03400 PF04397 LytTr DNA-binding domain IBG34_03400 PF00072 Response regulator receiver domain IBG34_03405 PF07694 5TMR of 5TMR-LYT IBG34_03405 PF06580 Histidine kinase IBG34_03410 PF11871 Domain of unknown function (DUF3391) IBG34_03410 PF01966 HD domain IBG34_03415 PF00171 Aldehyde dehydrogenase family IBG34_03415 PF00465 Iron-containing alcohol dehydrogenase IBG34_03420 PF01914 MarC family integral membrane protein IBG34_03425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IBG34_03430 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_03435 PF12911 N-terminal TM domain of oligopeptide transport permease C IBG34_03435 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_03440 PF00005 ABC transporter IBG34_03440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IBG34_03450 PF00005 ABC transporter IBG34_03450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IBG34_03455 PF03741 Integral membrane protein TerC family IBG34_03460 PF00842 Alanine racemase, C-terminal domain IBG34_03460 PF01168 Alanine racemase, N-terminal domain IBG34_03470 PF00375 Sodium:dicarboxylate symporter family IBG34_03485 PF01979 Amidohydrolase family IBG34_03495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_03495 PF00672 HAMP domain IBG34_03500 PF01230 HIT domain IBG34_03540 PF07549 SecD/SecF GG Motif IBG34_03540 PF02355 Protein export membrane protein IBG34_03560 PF01432 Peptidase family M3 IBG34_03560 PF08439 Oligopeptidase F IBG34_03565 PF01432 Peptidase family M3 IBG34_03565 PF08439 Oligopeptidase F IBG34_03570 PF05728 Uncharacterised protein family (UPF0227) IBG34_03575 PF07992 Pyridine nucleotide-disulphide oxidoreductase IBG34_03585 PF01906 Putative heavy-metal-binding IBG34_03600 PF00696 Amino acid kinase family IBG34_03600 PF01842 ACT domain IBG34_03605 PF00696 Amino acid kinase family IBG34_03605 PF00583 Acetyltransferase (GNAT) family IBG34_03610 PF01625 Peptide methionine sulfoxide reductase IBG34_03665 PF02687 FtsX-like permease family IBG34_03665 PF12704 MacB-like periplasmic core domain IBG34_03685 PF03600 Citrate transporter IBG34_03695 PF07690 Major Facilitator Superfamily IBG34_03720 PF03239 Iron permease FTR1 family IBG34_03750 PF14403 Circularly permuted ATP-grasp type 2 IBG34_03750 PF04168 A predicted alpha-helical domain with a conserved ER motif. IBG34_03755 PF14403 Circularly permuted ATP-grasp type 2 IBG34_03770 PF00916 Sulfate permease family IBG34_03770 PF01740 STAS domain IBG34_03790 PF13358 DDE superfamily endonuclease IBG34_03790 PF13592 Winged helix-turn helix IBG34_03800 PF02384 N-6 DNA Methylase IBG34_03820 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A IBG34_03845 PF07273 Protein of unknown function (DUF1439) IBG34_03860 PF00717 Peptidase S24-like IBG34_03875 PF02384 N-6 DNA Methylase IBG34_03875 PF12161 HsdM N-terminal domain IBG34_03880 PF01420 Type I restriction modification DNA specificity domain IBG34_03910 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A IBG34_03960 PF04002 RadC-like JAB domain IBG34_04005 PF09588 YqaJ-like viral recombinase domain IBG34_04020 PF13592 Winged helix-turn helix IBG34_04020 PF13358 DDE superfamily endonuclease IBG34_04045 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IBG34_04045 PF01926 50S ribosome-binding GTPase IBG34_04055 PF13426 PAS domain IBG34_04055 PF08447 PAS fold IBG34_04055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_04090 PF00665 Integrase core domain IBG34_04120 PF02397 Bacterial sugar transferase IBG34_04140 PF02706 Chain length determinant protein IBG34_04140 PF13614 AAA domain IBG34_04140 PF13807 G-rich domain on putative tyrosine kinase IBG34_04145 PF09721 Transmembrane exosortase (Exosortase_EpsH) IBG34_04160 PF00534 Glycosyl transferases group 1 IBG34_04160 PF13439 Glycosyltransferase Family 4 IBG34_04165 PF00150 Cellulase (glycosyl hydrolase family 5) IBG34_04190 PF01501 Glycosyl transferase family 8 IBG34_04200 PF01050 Mannose-6-phosphate isomerase IBG34_04200 PF00483 Nucleotidyl transferase IBG34_04205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IBG34_04205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IBG34_04205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IBG34_04205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IBG34_04210 PF05656 Protein of unknown function (DUF805) IBG34_04215 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IBG34_04215 PF06481 COX Aromatic Rich Motif IBG34_04225 PF00510 Cytochrome c oxidase subunit III IBG34_04230 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IBG34_04235 PF01040 UbiA prenyltransferase family IBG34_04255 PF02796 Helix-turn-helix domain of resolvase IBG34_04255 PF00665 Integrase core domain IBG34_04260 PF01695 IstB-like ATP binding protein IBG34_04275 PF01695 IstB-like ATP binding protein IBG34_04305 PF00440 Bacterial regulatory proteins, tetR family IBG34_04310 PF02321 Outer membrane efflux protein IBG34_04315 PF13533 Biotin-lipoyl like IBG34_04340 PF04717 Type VI secretion system, phage-baseplate injector IBG34_04360 PF13358 DDE superfamily endonuclease IBG34_04360 PF13592 Winged helix-turn helix IBG34_04370 PF13356 Arm DNA-binding domain IBG34_04370 PF00589 Phage integrase family IBG34_04395 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal IBG34_04395 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IBG34_04400 PF13247 4Fe-4S dicluster domain IBG34_04405 PF03916 Polysulphide reductase, NrfD IBG34_04410 PF00374 Nickel-dependent hydrogenase IBG34_04415 PF01750 Hydrogenase maturation protease IBG34_04420 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE IBG34_04425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IBG34_04440 PF00005 ABC transporter IBG34_04445 PF00005 ABC transporter IBG34_04450 PF02492 CobW/HypB/UreG, nucleotide-binding domain IBG34_04455 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA IBG34_04460 PF02769 AIR synthase related protein, C-terminal domain IBG34_04460 PF00586 AIR synthase related protein, N-terminal domain IBG34_04465 PF01924 Hydrogenase formation hypA family IBG34_04470 PF01455 HupF/HypC family IBG34_04480 PF13662 Toprim domain IBG34_04480 PF02132 RecR protein IBG34_04485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_04485 PF00183 Hsp90 protein IBG34_04490 PF05191 Adenylate kinase, active site lid IBG34_04495 PF00762 Ferrochelatase IBG34_04505 PF00294 pfkB family carbohydrate kinase IBG34_04525 PF00990 Diguanylate cyclase, GGDEF domain IBG34_04525 PF03707 Bacterial signalling protein N terminal repeat IBG34_04525 PF00563 EAL domain IBG34_04530 PF00483 Nucleotidyl transferase IBG34_04540 PF07273 Protein of unknown function (DUF1439) IBG34_04545 PF00425 chorismate binding enzyme IBG34_04550 PF00501 AMP-binding enzyme IBG34_04550 PF13193 AMP-binding enzyme C-terminal domain IBG34_04555 PF00550 Phosphopantetheine attachment site IBG34_04555 PF00857 Isochorismatase family IBG34_04575 PF14765 Polyketide synthase dehydratase IBG34_04575 PF00501 AMP-binding enzyme IBG34_04575 PF00109 Beta-ketoacyl synthase, N-terminal domain IBG34_04575 PF08659 KR domain IBG34_04575 PF02801 Beta-ketoacyl synthase, C-terminal domain IBG34_04575 PF16197 Ketoacyl-synthetase C-terminal extension IBG34_04575 PF00668 Condensation domain IBG34_04575 PF13193 AMP-binding enzyme C-terminal domain IBG34_04575 PF00550 Phosphopantetheine attachment site IBG34_04580 PF01497 Periplasmic binding protein IBG34_04585 PF17837 4'-phosphopantetheinyl transferase N-terminal domain IBG34_04585 PF01648 4'-phosphopantetheinyl transferase superfamily IBG34_04590 PF00005 ABC transporter IBG34_04595 PF01032 FecCD transport family IBG34_04600 PF01032 FecCD transport family IBG34_04605 PF07715 TonB-dependent Receptor Plug Domain IBG34_04605 PF00593 TonB dependent receptor IBG34_04620 PF11143 Protein of unknown function (DUF2919) IBG34_04625 PF01544 CorA-like Mg2+ transporter protein IBG34_04645 PF01012 Electron transfer flavoprotein domain IBG34_04655 PF00266 Aminotransferase class-V IBG34_04665 PF00793 DAHP synthetase I family IBG34_04670 PF03741 Integral membrane protein TerC family IBG34_04680 PF08891 YfcL protein IBG34_04685 PF00501 AMP-binding enzyme IBG34_04690 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region IBG34_04690 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IBG34_04695 PF04172 LrgB-like family IBG34_04700 PF03788 LrgA family IBG34_04715 PF08411 Exonuclease C-terminal IBG34_04715 PF00929 Exonuclease IBG34_04720 PF13356 Arm DNA-binding domain IBG34_04720 PF14659 Phage integrase, N-terminal SAM-like domain IBG34_04720 PF00589 Phage integrase family IBG34_04730 PF00436 Single-strand binding protein family IBG34_04765 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IBG34_04765 PF00533 BRCA1 C Terminus (BRCT) domain IBG34_04765 PF01653 NAD-dependent DNA ligase adenylation domain IBG34_04765 PF03120 NAD-dependent DNA ligase OB-fold domain IBG34_04765 PF12826 Helix-hairpin-helix motif IBG34_04840 PF09669 Phage regulatory protein Rha (Phage_pRha) IBG34_04840 PF10549 ORF11CD3 domain IBG34_04855 PF05866 Endodeoxyribonuclease RusA IBG34_04960 PF13358 DDE superfamily endonuclease IBG34_04960 PF13592 Winged helix-turn helix IBG34_04980 PF17482 Phage tail sheath C-terminal domain IBG34_04980 PF04984 Phage tail sheath protein subtilisin-like domain IBG34_05015 PF00149 Calcineurin-like phosphoesterase IBG34_05020 PF00497 Bacterial extracellular solute-binding proteins, family 3 IBG34_05025 PF00795 Carbon-nitrogen hydrolase IBG34_05040 PF11762 L-arabinose isomerase C-terminal domain IBG34_05040 PF02610 L-arabinose isomerase IBG34_05045 PF00596 Class II Aldolase and Adducin N-terminal domain IBG34_05050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IBG34_05055 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IBG34_05060 PF00005 ABC transporter IBG34_05070 PF12833 Helix-turn-helix domain IBG34_05070 PF02311 AraC-like ligand binding domain IBG34_05075 PF00444 Ribosomal protein L36 IBG34_05080 PF01197 Ribosomal protein L31 IBG34_05095 PF01863 Protein of unknown function DUF45 IBG34_05110 PF03606 C4-dicarboxylate anaerobic carrier IBG34_05125 PF00109 Beta-ketoacyl synthase, N-terminal domain IBG34_05125 PF02801 Beta-ketoacyl synthase, C-terminal domain IBG34_05140 PF00285 Citrate synthase, C-terminal domain IBG34_05145 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IBG34_05150 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IBG34_05155 PF00890 FAD binding domain IBG34_05155 PF02910 Fumarate reductase flavoprotein C-term IBG34_05160 PF13085 2Fe-2S iron-sulfur cluster binding domain IBG34_05170 PF02817 e3 binding domain IBG34_05170 PF00364 Biotin-requiring enzyme IBG34_05170 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IBG34_05175 PF00549 CoA-ligase IBG34_05175 PF08442 ATP-grasp domain IBG34_05180 PF02629 CoA binding domain IBG34_05180 PF00549 CoA-ligase IBG34_05195 PF01266 FAD dependent oxidoreductase IBG34_05200 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_05205 PF00005 ABC transporter IBG34_05220 PF00266 Aminotransferase class-V IBG34_05225 PF00202 Aminotransferase class-III IBG34_05235 PF01228 Glycine radical IBG34_05235 PF02901 Pyruvate formate lyase-like IBG34_05245 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding IBG34_05245 PF18381 YcaO cyclodehydratase C-terminal domain IBG34_05255 PF01609 Transposase DDE domain IBG34_05255 PF13006 Insertion element 4 transposase N-terminal IBG34_05260 PF00893 Small Multidrug Resistance protein IBG34_05265 PF01118 Semialdehyde dehydrogenase, NAD binding domain IBG34_05265 PF02774 Semialdehyde dehydrogenase, dimerisation domain IBG34_05270 PF00313 'Cold-shock' DNA-binding domain IBG34_05275 PF02617 ATP-dependent Clp protease adaptor protein ClpS IBG34_05280 PF10431 C-terminal, D2-small domain, of ClpB protein IBG34_05280 PF17871 AAA lid domain IBG34_05280 PF07724 AAA domain (Cdc48 subfamily) IBG34_05280 PF00004 ATPase family associated with various cellular activities (AAA) IBG34_05280 PF02861 Clp amino terminal domain, pathogenicity island component IBG34_05285 PF01176 Translation initiation factor 1A / IF-1 IBG34_05290 PF04376 Arginine-tRNA-protein transferase, N terminus IBG34_05290 PF04377 Arginine-tRNA-protein transferase, C terminus IBG34_05295 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IBG34_05305 PF00990 Diguanylate cyclase, GGDEF domain IBG34_05305 PF05230 MASE2 domain IBG34_05310 PF07992 Pyridine nucleotide-disulphide oxidoreductase IBG34_05315 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IBG34_05315 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IBG34_05320 PF01037 Lrp/AsnC ligand binding domain IBG34_05325 PF01580 FtsK/SpoIIIE family IBG34_05325 PF17854 FtsK alpha domain IBG34_05325 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IBG34_05325 PF09397 Ftsk gamma domain IBG34_05330 PF03548 Outer membrane lipoprotein carrier protein LolA IBG34_05340 PF02403 Seryl-tRNA synthetase N-terminal domain IBG34_05340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IBG34_05345 PF02674 Colicin V production protein IBG34_05350 PF00156 Phosphoribosyl transferase domain IBG34_05355 PF00232 Glycosyl hydrolase family 1 IBG34_05360 PF00367 phosphotransferase system, EIIB IBG34_05360 PF02378 Phosphotransferase system, EIIC IBG34_05365 PF00356 Bacterial regulatory proteins, lacI family IBG34_05370 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) IBG34_05375 PF00005 ABC transporter IBG34_05405 PF04012 PspA/IM30 family IBG34_05410 PF06667 Phage shock protein B IBG34_05430 PF00351 Biopterin-dependent aromatic amino acid hydroxylase IBG34_05435 PF01329 Pterin 4 alpha carbinolamine dehydratase IBG34_05445 PF13689 YfiR/HmsC-like IBG34_05455 PF00691 OmpA family IBG34_05460 PF04055 Radical SAM superfamily IBG34_05465 PF02601 Exonuclease VII, large subunit IBG34_05465 PF13742 OB-fold nucleic acid binding domain IBG34_05475 PF00128 Alpha amylase, catalytic domain IBG34_05475 PF03423 Carbohydrate binding domain (family 25) IBG34_05475 PF01373 Glycosyl hydrolase family 14 IBG34_05485 PF00571 CBS domain IBG34_05485 PF00478 IMP dehydrogenase / GMP reductase domain IBG34_05490 PF00117 Glutamine amidotransferase class-I IBG34_05490 PF00958 GMP synthase C terminal domain IBG34_05490 PF02540 NAD synthase IBG34_05510 PF05724 Thiopurine S-methyltransferase (TPMT) IBG34_05520 PF00300 Histidine phosphatase superfamily (branch 1) IBG34_05540 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IBG34_05560 PF00005 ABC transporter IBG34_05565 PF02687 FtsX-like permease family IBG34_05565 PF12704 MacB-like periplasmic core domain IBG34_05585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IBG34_05585 PF05698 Bacterial trigger factor protein (TF) C-terminus IBG34_05585 PF05697 Bacterial trigger factor protein (TF) IBG34_05590 PF00574 Clp protease IBG34_05605 PF00216 Bacterial DNA-binding protein IBG34_05610 PF13145 PPIC-type PPIASE domain IBG34_05615 PF00005 ABC transporter IBG34_05615 PF12848 ABC transporter IBG34_05620 PF00474 Sodium:solute symporter family IBG34_05625 PF04341 Protein of unknown function, DUF485 IBG34_05640 PF00378 Enoyl-CoA hydratase/isomerase IBG34_05645 PF01235 Sodium:alanine symporter family IBG34_05660 PF01184 GPR1/FUN34/yaaH family IBG34_05670 PF00376 MerR family regulatory protein IBG34_05670 PF09278 MerR, DNA binding IBG34_05695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IBG34_05695 PF02770 Acyl-CoA dehydrogenase, middle domain IBG34_05695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IBG34_05705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IBG34_05705 PF02770 Acyl-CoA dehydrogenase, middle domain IBG34_05705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IBG34_05710 PF00378 Enoyl-CoA hydratase/isomerase IBG34_05715 PF00378 Enoyl-CoA hydratase/isomerase IBG34_05730 PF13520 Amino acid permease IBG34_05755 PF10711 Hypothetical protein (DUF2513) IBG34_05775 PF02653 Branched-chain amino acid transport system / permease component IBG34_05790 PF01609 Transposase DDE domain IBG34_05790 PF13808 DDE_Tnp_1-associated IBG34_05815 PF02634 FdhD/NarQ family IBG34_05875 PF03466 LysR substrate binding domain IBG34_05875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_05885 PF03279 Bacterial lipid A biosynthesis acyltransferase IBG34_05890 PF03279 Bacterial lipid A biosynthesis acyltransferase IBG34_05900 PF05726 Pirin C-terminal cupin domain IBG34_05900 PF02678 Pirin IBG34_05915 PF00136 DNA polymerase family B IBG34_05915 PF03104 DNA polymerase family B, exonuclease domain IBG34_05945 PF01554 MatE IBG34_05950 PF06786 Uncharacterised protein family (UPF0253) IBG34_05955 PF00677 Lumazine binding domain IBG34_05965 PF13419 Haloacid dehalogenase-like hydrolase IBG34_05975 PF00892 EamA-like transporter family IBG34_05980 PF02525 Flavodoxin-like fold IBG34_06015 PF04269 Protein of unknown function, DUF440 IBG34_06020 PF00912 Transglycosylase IBG34_06025 PF04269 Protein of unknown function, DUF440 IBG34_06035 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IBG34_06040 PF03775 Septum formation inhibitor MinC, C-terminal domain IBG34_06040 PF05209 Septum formation inhibitor MinC, N-terminal domain IBG34_06045 PF05166 YcgL domain IBG34_06075 PF09278 MerR, DNA binding IBG34_06075 PF00376 MerR family regulatory protein IBG34_06095 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IBG34_06130 PF01882 Protein of unknown function DUF58 IBG34_06140 PF07726 ATPase family associated with various cellular activities (AAA) IBG34_06140 PF17863 AAA lid domain IBG34_06150 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IBG34_06150 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IBG34_06150 PF00378 Enoyl-CoA hydratase/isomerase IBG34_06160 PF07152 YaeQ protein IBG34_06180 PF00005 ABC transporter IBG34_06210 PF13533 Biotin-lipoyl like IBG34_06220 PF05433 Glycine zipper 2TM domain IBG34_06255 PF01502 Phosphoribosyl-AMP cyclohydrolase IBG34_06255 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IBG34_06260 PF00977 Histidine biosynthesis protein IBG34_06275 PF00072 Response regulator receiver domain IBG34_06285 PF00117 Glutamine amidotransferase class-I IBG34_06290 PF08645 Polynucleotide kinase 3 phosphatase IBG34_06290 PF00475 Imidazoleglycerol-phosphate dehydratase IBG34_06295 PF00155 Aminotransferase class I and II IBG34_06305 PF08029 HisG, C-terminal domain IBG34_06305 PF01634 ATP phosphoribosyltransferase IBG34_06320 PF00814 Glycoprotease family IBG34_06330 PF00561 alpha/beta hydrolase fold IBG34_06350 PF00892 EamA-like transporter family IBG34_06360 PF01207 Dihydrouridine synthase (Dus) IBG34_06365 PF04304 Protein of unknown function (DUF454) IBG34_06370 PF00156 Phosphoribosyl transferase domain IBG34_06380 PF02575 YbaB/EbfC DNA-binding family IBG34_06385 PF00857 Isochorismatase family IBG34_06390 PF02678 Pirin IBG34_06390 PF05726 Pirin C-terminal cupin domain IBG34_06395 PF03466 LysR substrate binding domain IBG34_06395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_06400 PF07670 Nucleoside recognition IBG34_06405 PF00196 Bacterial regulatory proteins, luxR family IBG34_06405 PF00072 Response regulator receiver domain IBG34_06410 PF00571 CBS domain IBG34_06410 PF01368 DHH family IBG34_06410 PF02272 DHHA1 domain IBG34_06410 PF01743 Poly A polymerase head domain IBG34_06425 PF01386 Ribosomal L25p family IBG34_06430 PF00753 Metallo-beta-lactamase superfamily IBG34_06440 PF00586 AIR synthase related protein, N-terminal domain IBG34_06440 PF02769 AIR synthase related protein, C-terminal domain IBG34_06455 PF10672 S-adenosylmethionine-dependent methyltransferase IBG34_06455 PF17785 PUA-like domain IBG34_06460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_06460 PF00672 HAMP domain IBG34_06460 PF12729 Four helix bundle sensory module for signal transduction IBG34_06465 PF00708 Acylphosphatase IBG34_06475 PF01588 Putative tRNA binding domain IBG34_06475 PF08264 Anticodon-binding domain of tRNA IBG34_06475 PF09334 tRNA synthetases class I (M) IBG34_06480 PF10609 NUBPL iron-transfer P-loop NTPase IBG34_06485 PF00485 Phosphoribulokinase / Uridine kinase family IBG34_06490 PF00692 dUTPase IBG34_06495 PF01384 Phosphate transporter family IBG34_06505 PF00849 RNA pseudouridylate synthase IBG34_06505 PF01479 S4 domain IBG34_06510 PF02545 Maf-like protein IBG34_06520 PF02620 Large ribosomal RNA subunit accumulation protein YceD IBG34_06525 PF01783 Ribosomal L32p protein family IBG34_06535 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IBG34_06535 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IBG34_06540 PF00698 Acyl transferase domain IBG34_06550 PF00550 Phosphopantetheine attachment site IBG34_06555 PF00109 Beta-ketoacyl synthase, N-terminal domain IBG34_06555 PF02801 Beta-ketoacyl synthase, C-terminal domain IBG34_06560 PF01063 Amino-transferase class IV IBG34_06565 PF02618 YceG-like family IBG34_06570 PF02223 Thymidylate kinase IBG34_06575 PF09115 DNA polymerase III, delta subunit, C terminal IBG34_06585 PF00589 Phage integrase family IBG34_06595 PF01189 16S rRNA methyltransferase RsmB/F IBG34_06595 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF IBG34_06595 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF IBG34_06605 PF04403 Paraquat-inducible protein A IBG34_06615 PF07130 YebG protein IBG34_06625 PF05362 Lon protease (S16) C-terminal proteolytic domain IBG34_06625 PF13654 AAA domain IBG34_06630 PF07977 FabA-like domain IBG34_06635 PF04957 Ribosome modulation factor IBG34_06645 PF00005 ABC transporter IBG34_06645 PF16326 ABC transporter C-terminal domain IBG34_06645 PF12848 ABC transporter IBG34_06655 PF10672 S-adenosylmethionine-dependent methyltransferase IBG34_06655 PF02926 THUMP domain IBG34_06655 PF01170 Putative RNA methylase family UPF0020 IBG34_06660 PF07126 Cell-division protein ZapC IBG34_06665 PF01180 Dihydroorotate dehydrogenase IBG34_06680 PF11940 Domain of unknown function (DUF3458) Ig-like fold IBG34_06680 PF17432 Domain of unknown function (DUF3458_C) ARM repeats IBG34_06680 PF01433 Peptidase family M1 domain IBG34_06685 PF11818 C-terminal domain of tail specific protease (DUF3340) IBG34_06685 PF00595 PDZ domain IBG34_06685 PF03572 Peptidase family S41 IBG34_06685 PF17804 Tail specific protease N-terminal domain IBG34_06690 PF17516 ProQ C-terminal domain IBG34_06690 PF04352 ProQ/FINO family IBG34_06695 PF13185 GAF domain IBG34_06705 PF00115 Cytochrome C and Quinol oxidase polypeptide I IBG34_06720 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IBG34_06720 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP IBG34_06745 PF00027 Cyclic nucleotide-binding domain IBG34_06745 PF13545 Crp-like helix-turn-helix domain IBG34_06770 PF13417 Glutathione S-transferase, N-terminal domain IBG34_06775 PF05025 RbsD / FucU transport protein family IBG34_06780 PF00005 ABC transporter IBG34_06785 PF02653 Branched-chain amino acid transport system / permease component IBG34_06790 PF13407 Periplasmic binding protein domain IBG34_06795 PF00294 pfkB family carbohydrate kinase IBG34_06800 PF00356 Bacterial regulatory proteins, lacI family IBG34_06805 PF00563 EAL domain IBG34_06805 PF00990 Diguanylate cyclase, GGDEF domain IBG34_06805 PF03707 Bacterial signalling protein N terminal repeat IBG34_06815 PF02146 Sir2 family IBG34_06830 PF00512 His Kinase A (phospho-acceptor) domain IBG34_06830 PF09456 RcsC Alpha-Beta-Loop (ABL) IBG34_06830 PF00072 Response regulator receiver domain IBG34_06830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_06835 PF00216 Bacterial DNA-binding protein IBG34_06840 PF01588 Putative tRNA binding domain IBG34_06840 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IBG34_06840 PF03484 tRNA synthetase B5 domain IBG34_06840 PF03483 B3/4 domain IBG34_06840 PF03147 Ferredoxin-fold anticodon binding domain IBG34_06845 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IBG34_06845 PF01409 tRNA synthetases class II core domain (F) IBG34_06850 PF00453 Ribosomal protein L20 IBG34_06855 PF01632 Ribosomal protein L35 IBG34_06860 PF00707 Translation initiation factor IF-3, C-terminal domain IBG34_06860 PF05198 Translation initiation factor IF-3, N-terminal domain IBG34_06865 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IBG34_06865 PF03129 Anticodon binding domain IBG34_06865 PF02824 TGS domain IBG34_06865 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IBG34_06880 PF04055 Radical SAM superfamily IBG34_06890 PF03989 DNA gyrase C-terminal domain, beta-propeller IBG34_06890 PF00521 DNA gyrase/topoisomerase IV, subunit A IBG34_06900 PF13419 Haloacid dehalogenase-like hydrolase IBG34_06915 PF00111 2Fe-2S iron-sulfur cluster binding domain IBG34_06925 PF06945 Protein of unknown function (DUF1289) IBG34_06935 PF00294 pfkB family carbohydrate kinase IBG34_06945 PF00356 Bacterial regulatory proteins, lacI family IBG34_06945 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IBG34_06950 PF03222 Tryptophan/tyrosine permease family IBG34_06955 PF01124 MAPEG family IBG34_06960 PF00270 DEAD/DEAH box helicase IBG34_06960 PF00271 Helicase conserved C-terminal domain IBG34_06975 PF05175 Methyltransferase small domain IBG34_06980 PF01713 Smr domain IBG34_07005 PF08329 Chitinase A, N-terminal domain IBG34_07005 PF00704 Glycosyl hydrolases family 18 IBG34_07015 PF03831 PhnA domain IBG34_07015 PF08274 PhnA Zinc-Ribbon IBG34_07040 PF00300 Histidine phosphatase superfamily (branch 1) IBG34_07060 PF05036 Sporulation related domain IBG34_07060 PF03330 Lytic transglycolase IBG34_07065 PF04310 MukB N-terminal IBG34_07065 PF16330 MukB hinge domain IBG34_07070 PF04288 MukE-like family IBG34_07075 PF03882 MukF winged-helix domain IBG34_07075 PF17193 MukF C-terminal domain IBG34_07075 PF17192 MukF middle domain IBG34_07080 PF13847 Methyltransferase domain IBG34_07085 PF02698 DUF218 domain IBG34_07090 PF00121 Triosephosphate isomerase IBG34_07095 PF00365 Phosphofructokinase IBG34_07105 PF13419 Haloacid dehalogenase-like hydrolase IBG34_07110 PF00883 Cytosol aminopeptidase family, catalytic domain IBG34_07110 PF02789 Cytosol aminopeptidase family, N-terminal domain IBG34_07165 PF12833 Helix-turn-helix domain IBG34_07165 PF02311 AraC-like ligand binding domain IBG34_07190 PF03942 DTW domain IBG34_07195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IBG34_07195 PF18029 Glyoxalase-like domain IBG34_07200 PF07478 D-ala D-ala ligase C-terminus IBG34_07200 PF01820 D-ala D-ala ligase N-terminus IBG34_07210 PF00255 Glutathione peroxidase IBG34_07215 PF00270 DEAD/DEAH box helicase IBG34_07215 PF00271 Helicase conserved C-terminal domain IBG34_07230 PF02694 Uncharacterised BCR, YnfA/UPF0060 family IBG34_07240 PF01928 CYTH domain IBG34_07245 PF00293 NUDIX domain IBG34_07250 PF13673 Acetyltransferase (GNAT) domain IBG34_07255 PF03992 Antibiotic biosynthesis monooxygenase IBG34_07260 PF08543 Phosphomethylpyrimidine kinase IBG34_07280 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus IBG34_07280 PF00561 alpha/beta hydrolase fold IBG34_07285 PF01575 MaoC like domain IBG34_07315 PF00664 ABC transporter transmembrane region IBG34_07315 PF00005 ABC transporter IBG34_07330 PF00085 Thioredoxin IBG34_07370 PF00293 NUDIX domain IBG34_07375 PF03222 Tryptophan/tyrosine permease family IBG34_07380 PF00375 Sodium:dicarboxylate symporter family IBG34_07385 PF00570 HRDC domain IBG34_07385 PF16124 RecQ zinc-binding IBG34_07385 PF09382 RQC domain IBG34_07385 PF00270 DEAD/DEAH box helicase IBG34_07385 PF00271 Helicase conserved C-terminal domain IBG34_07390 PF08298 PrkA AAA domain IBG34_07390 PF06798 PrkA serine protein kinase C-terminal domain IBG34_07395 PF04285 Protein of unknown function (DUF444) IBG34_07400 PF04293 SpoVR like protein IBG34_07405 PF07840 FadR C-terminal domain IBG34_07405 PF00392 Bacterial regulatory proteins, gntR family IBG34_07415 PF02600 Disulfide bond formation protein DsbB IBG34_07425 PF09335 SNARE associated Golgi protein IBG34_07450 PF02080 TrkA-C domain IBG34_07450 PF06826 Predicted Permease Membrane Region IBG34_07475 PF01609 Transposase DDE domain IBG34_07475 PF13006 Insertion element 4 transposase N-terminal IBG34_07485 PF00072 Response regulator receiver domain IBG34_07490 PF00989 PAS fold IBG34_07490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_07490 PF17203 Single cache domain 3 IBG34_07490 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IBG34_07495 PF00480 ROK family IBG34_07495 PF01047 MarR family IBG34_07500 PF00672 HAMP domain IBG34_07500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_07500 PF17200 Single Cache domain 2 IBG34_07505 PF02810 SEC-C motif IBG34_07515 PF00890 FAD binding domain IBG34_07540 PF00037 4Fe-4S binding domain IBG34_07540 PF13247 4Fe-4S dicluster domain IBG34_07545 PF03916 Polysulphide reductase, NrfD IBG34_07550 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IBG34_07550 PF01578 Cytochrome C assembly protein IBG34_07555 PF08534 Redoxin IBG34_07575 PF04244 Deoxyribodipyrimidine photo-lyase-related protein IBG34_07580 PF01266 FAD dependent oxidoreductase IBG34_07625 PF00990 Diguanylate cyclase, GGDEF domain IBG34_07635 PF00106 short chain dehydrogenase IBG34_07645 PF13460 NAD(P)H-binding IBG34_07690 PF05598 Transposase domain (DUF772) IBG34_07690 PF01609 Transposase DDE domain IBG34_07760 PF13657 HipA N-terminal domain IBG34_07760 PF07804 HipA-like C-terminal domain IBG34_07785 PF10722 Putative bacterial sensory transduction regulator IBG34_07795 PF00265 Thymidine kinase IBG34_07800 PF03553 Na+/H+ antiporter family IBG34_07810 PF01923 Cobalamin adenosyltransferase IBG34_07815 PF12843 Putative quorum-sensing-regulated virulence factor IBG34_07820 PF04055 Radical SAM superfamily IBG34_07825 PF06508 Queuosine biosynthesis protein QueC IBG34_07840 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IBG34_07845 PF18073 Rubredoxin metal binding domain IBG34_07855 PF00216 Bacterial DNA-binding protein IBG34_07860 PF00575 S1 RNA binding domain IBG34_07865 PF02224 Cytidylate kinase IBG34_07870 PF00925 GTP cyclohydrolase II IBG34_07875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_07875 PF03466 LysR substrate binding domain IBG34_07895 PF00881 Nitroreductase family IBG34_07905 PF13188 PAS domain IBG34_07905 PF03707 Bacterial signalling protein N terminal repeat IBG34_07905 PF00990 Diguanylate cyclase, GGDEF domain IBG34_07905 PF00563 EAL domain IBG34_07920 PF00072 Response regulator receiver domain IBG34_07930 PF01212 Beta-eliminating lyase IBG34_07945 PF00248 Aldo/keto reductase family IBG34_07950 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) IBG34_07960 PF03411 Penicillin-insensitive murein endopeptidase IBG34_07970 PF04536 TPM domain IBG34_07995 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IBG34_08000 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IBG34_08015 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IBG34_08015 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IBG34_08020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IBG34_08020 PF00384 Molybdopterin oxidoreductase IBG34_08020 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IBG34_08025 PF00146 NADH dehydrogenase IBG34_08030 PF12838 4Fe-4S dicluster domain IBG34_08035 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IBG34_08040 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IBG34_08045 PF00361 Proton-conducting membrane transporter IBG34_08045 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IBG34_08050 PF00361 Proton-conducting membrane transporter IBG34_08055 PF00361 Proton-conducting membrane transporter IBG34_08060 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal IBG34_08060 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IBG34_08060 PF02769 AIR synthase related protein, C-terminal domain IBG34_08065 PF00497 Bacterial extracellular solute-binding proteins, family 3 IBG34_08065 PF01464 Transglycosylase SLT domain IBG34_08070 PF07191 zinc-ribbons IBG34_08080 PF13360 PQQ-like domain IBG34_08085 PF09976 Tetratricopeptide repeat-like domain IBG34_08090 PF13393 Histidyl-tRNA synthetase IBG34_08090 PF03129 Anticodon binding domain IBG34_08095 PF04551 GcpE protein IBG34_08100 PF13464 Domain of unknown function (DUF4115) IBG34_08110 PF04055 Radical SAM superfamily IBG34_08115 PF00334 Nucleoside diphosphate kinase IBG34_08125 PF12404 Peptidase IBG34_08125 PF00883 Cytosol aminopeptidase family, catalytic domain IBG34_08130 PF00111 2Fe-2S iron-sulfur cluster binding domain IBG34_08135 PF00012 Hsp70 protein IBG34_08140 PF00226 DnaJ domain IBG34_08140 PF07743 HSCB C-terminal oligomerisation domain IBG34_08145 PF01521 Iron-sulphur cluster biosynthesis IBG34_08150 PF01592 NifU-like N terminal domain IBG34_08160 PF02082 Transcriptional regulator IBG34_08165 PF00588 SpoU rRNA Methylase family IBG34_08175 PF02036 SCP-2 sterol transfer family IBG34_08180 PF01136 Peptidase family U32 IBG34_08190 PF13181 Tetratricopeptide repeat IBG34_08190 PF07719 Tetratricopeptide repeat IBG34_08195 PF00581 Rhodanese-like domain IBG34_08200 PF07549 SecD/SecF GG Motif IBG34_08200 PF02355 Protein export membrane protein IBG34_08205 PF13721 SecD export protein N-terminal TM region IBG34_08205 PF02355 Protein export membrane protein IBG34_08205 PF07549 SecD/SecF GG Motif IBG34_08210 PF02699 Preprotein translocase subunit IBG34_08215 PF01702 Queuine tRNA-ribosyltransferase IBG34_08220 PF02547 Queuosine biosynthesis protein IBG34_08225 PF00571 CBS domain IBG34_08230 PF10417 C-terminal domain of 1-Cys peroxiredoxin IBG34_08230 PF00578 AhpC/TSA family IBG34_08235 PF07992 Pyridine nucleotide-disulphide oxidoreductase IBG34_08235 PF13192 Thioredoxin domain IBG34_08250 PF00990 Diguanylate cyclase, GGDEF domain IBG34_08255 PF08241 Methyltransferase domain IBG34_08280 PF09722 Protein of unknown function (DUF2384) IBG34_08305 PF13358 DDE superfamily endonuclease IBG34_08305 PF13592 Winged helix-turn helix IBG34_08315 PF00665 Integrase core domain IBG34_08330 PF11867 Domain of unknown function (DUF3387) IBG34_08330 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IBG34_08330 PF18766 SWI2/SNF2 ATPase IBG34_08340 PF13592 Winged helix-turn helix IBG34_08340 PF13358 DDE superfamily endonuclease IBG34_08355 PF13808 DDE_Tnp_1-associated IBG34_08355 PF01609 Transposase DDE domain IBG34_08360 PF01420 Type I restriction modification DNA specificity domain IBG34_08365 PF12161 HsdM N-terminal domain IBG34_08365 PF02384 N-6 DNA Methylase IBG34_08375 PF02347 Glycine cleavage system P-protein IBG34_08380 PF01597 Glycine cleavage H-protein IBG34_08385 PF08669 Glycine cleavage T-protein C-terminal barrel domain IBG34_08385 PF01571 Aminomethyltransferase folate-binding domain IBG34_08395 PF01494 FAD binding domain IBG34_08400 PF03695 Uncharacterised protein family (UPF0149) IBG34_08405 PF05164 Cell division protein ZapA IBG34_08415 PF00356 Bacterial regulatory proteins, lacI family IBG34_08425 PF02653 Branched-chain amino acid transport system / permease component IBG34_08440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IBG34_08440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IBG34_08445 PF07690 Major Facilitator Superfamily IBG34_08455 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_08455 PF12911 N-terminal TM domain of oligopeptide transport permease C IBG34_08460 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_08470 PF00043 Glutathione S-transferase, C-terminal domain IBG34_08470 PF02798 Glutathione S-transferase, N-terminal domain IBG34_08475 PF13417 Glutathione S-transferase, N-terminal domain IBG34_08485 PF00459 Inositol monophosphatase family IBG34_08490 PF00691 OmpA family IBG34_08490 PF18393 MotY N-terminal domain IBG34_08495 PF00929 Exonuclease IBG34_08500 PF03553 Na+/H+ antiporter family IBG34_08500 PF13726 Na+-H+ antiporter family IBG34_08505 PF13188 PAS domain IBG34_08505 PF03707 Bacterial signalling protein N terminal repeat IBG34_08505 PF00563 EAL domain IBG34_08505 PF00990 Diguanylate cyclase, GGDEF domain IBG34_08515 PF03880 DbpA RNA binding domain IBG34_08515 PF00270 DEAD/DEAH box helicase IBG34_08515 PF00271 Helicase conserved C-terminal domain IBG34_08520 PF03061 Thioesterase superfamily IBG34_08530 PF02913 FAD linked oxidases, C-terminal domain IBG34_08530 PF01565 FAD binding domain IBG34_08530 PF13183 4Fe-4S dicluster domain IBG34_08540 PF01609 Transposase DDE domain IBG34_08540 PF13808 DDE_Tnp_1-associated IBG34_08560 PF00962 Adenosine/AMP deaminase IBG34_08565 PF13344 Haloacid dehalogenase-like hydrolase IBG34_08575 PF00733 Asparagine synthase IBG34_08575 PF13537 Glutamine amidotransferase domain IBG34_08585 PF14497 Glutathione S-transferase, C-terminal domain IBG34_08585 PF02798 Glutathione S-transferase, N-terminal domain IBG34_08595 PF04209 homogentisate 1,2-dioxygenase IBG34_08600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IBG34_08610 PF00849 RNA pseudouridylate synthase IBG34_08620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_08620 PF12729 Four helix bundle sensory module for signal transduction IBG34_08620 PF00672 HAMP domain IBG34_08625 PF00501 AMP-binding enzyme IBG34_08625 PF13193 AMP-binding enzyme C-terminal domain IBG34_08650 PF07044 Protein of unknown function (DUF1329) IBG34_08660 PF01144 Coenzyme A transferase IBG34_08665 PF01144 Coenzyme A transferase IBG34_08670 PF03601 Conserved hypothetical protein 698 IBG34_08680 PF07690 Major Facilitator Superfamily IBG34_08695 PF08240 Alcohol dehydrogenase GroES-like domain IBG34_08695 PF00107 Zinc-binding dehydrogenase IBG34_08705 PF00285 Citrate synthase, C-terminal domain IBG34_08710 PF00694 Aconitase C-terminal domain IBG34_08710 PF00330 Aconitase family (aconitate hydratase) IBG34_08715 PF00330 Aconitase family (aconitate hydratase) IBG34_08715 PF00694 Aconitase C-terminal domain IBG34_08720 PF04303 PrpF protein IBG34_08730 PF01027 Inhibitor of apoptosis-promoting Bax1 IBG34_08740 PF12805 FUSC-like inner membrane protein yccS IBG34_08745 PF04358 DsrC like protein IBG34_08750 PF05036 Sporulation related domain IBG34_08755 PF08245 Mur ligase middle domain IBG34_08755 PF02875 Mur ligase family, glutamate ligase domain IBG34_08760 PF01039 Carboxyl transferase domain IBG34_08760 PF17848 Acetyl-coA carboxylase zinc finger domain IBG34_08765 PF01416 tRNA pseudouridine synthase IBG34_08775 PF01118 Semialdehyde dehydrogenase, NAD binding domain IBG34_08775 PF02774 Semialdehyde dehydrogenase, dimerisation domain IBG34_08785 PF01569 PAP2 superfamily IBG34_08790 PF03180 NLPA lipoprotein IBG34_08810 PF00082 Subtilase family IBG34_08810 PF01483 Proprotein convertase P-domain IBG34_08820 PF00391 PEP-utilising enzyme, mobile domain IBG34_08820 PF02896 PEP-utilising enzyme, TIM barrel domain IBG34_08820 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IBG34_08825 PF03618 Kinase/pyrophosphorylase IBG34_08835 PF00324 Amino acid permease IBG34_08905 PF04055 Radical SAM superfamily IBG34_08905 PF16199 Radical_SAM C-terminal domain IBG34_08910 PF01493 GXGXG motif IBG34_08910 PF00310 Glutamine amidotransferases class-II IBG34_08910 PF01645 Conserved region in glutamate synthase IBG34_08910 PF04898 Glutamate synthase central domain IBG34_08915 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IBG34_08915 PF07992 Pyridine nucleotide-disulphide oxidoreductase IBG34_08930 PF00270 DEAD/DEAH box helicase IBG34_08930 PF00271 Helicase conserved C-terminal domain IBG34_08945 PF08378 Nuclease-related domain IBG34_08950 PF07759 Protein of unknown function (DUF1615) IBG34_08955 PF00990 Diguanylate cyclase, GGDEF domain IBG34_08960 PF00682 HMGL-like IBG34_08960 PF08502 LeuA allosteric (dimerisation) domain IBG34_08970 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IBG34_08970 PF00117 Glutamine amidotransferase class-I IBG34_09000 PF01219 Prokaryotic diacylglycerol kinase IBG34_09005 PF00793 DAHP synthetase I family IBG34_09030 PF00437 Type II/IV secretion system protein IBG34_09035 PF00483 Nucleotidyl transferase IBG34_09045 PF07664 Ferrous iron transport protein B C terminus IBG34_09045 PF02421 Ferrous iron transport protein B IBG34_09045 PF07670 Nucleoside recognition IBG34_09055 PF01253 Translation initiation factor SUI1 IBG34_09060 PF01169 Uncharacterized protein family UPF0016 IBG34_09095 PF13185 GAF domain IBG34_09095 PF00990 Diguanylate cyclase, GGDEF domain IBG34_09100 PF13358 DDE superfamily endonuclease IBG34_09100 PF13592 Winged helix-turn helix IBG34_09105 PF05598 Transposase domain (DUF772) IBG34_09105 PF01609 Transposase DDE domain IBG34_09110 PF09190 DALR domain IBG34_09110 PF01406 tRNA synthetases class I (C) catalytic domain IBG34_09115 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IBG34_09125 PF00149 Calcineurin-like phosphoesterase IBG34_09130 PF04226 Transglycosylase associated protein IBG34_09135 PF13417 Glutathione S-transferase, N-terminal domain IBG34_09135 PF00043 Glutathione S-transferase, C-terminal domain IBG34_09160 PF13737 Transposase DDE domain IBG34_09180 PF01609 Transposase DDE domain IBG34_09180 PF13808 DDE_Tnp_1-associated IBG34_09195 PF05598 Transposase domain (DUF772) IBG34_09195 PF01609 Transposase DDE domain IBG34_09235 PF00589 Phage integrase family IBG34_09255 PF01066 CDP-alcohol phosphatidyltransferase IBG34_09260 PF08459 UvrC Helix-hairpin-helix N-terminal IBG34_09260 PF01541 GIY-YIG catalytic domain IBG34_09260 PF02151 UvrB/uvrC motif IBG34_09265 PF00196 Bacterial regulatory proteins, luxR family IBG34_09265 PF00072 Response regulator receiver domain IBG34_09270 PF02348 Cytidylyltransferase IBG34_09275 PF03966 Trm112p-like protein IBG34_09280 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IBG34_09285 PF00005 ABC transporter IBG34_09285 PF00664 ABC transporter transmembrane region IBG34_09305 PF05872 Bacterial protein of unknown function (DUF853) IBG34_09310 PF00155 Aminotransferase class I and II IBG34_09320 PF13609 Gram-negative porin IBG34_09325 PF06733 DEAD_2 IBG34_09325 PF13307 Helicase C-terminal domain IBG34_09335 PF00850 Histone deacetylase domain IBG34_09340 PF07690 Major Facilitator Superfamily IBG34_09355 PF00245 Alkaline phosphatase IBG34_09370 PF01272 Transcription elongation factor, GreA/GreB, C-term IBG34_09370 PF14760 Rnk N-terminus IBG34_09375 PF00196 Bacterial regulatory proteins, luxR family IBG34_09375 PF00072 Response regulator receiver domain IBG34_09380 PF05231 MASE1 IBG34_09380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_09380 PF07730 Histidine kinase IBG34_09385 PF07690 Major Facilitator Superfamily IBG34_09395 PF00497 Bacterial extracellular solute-binding proteins, family 3 IBG34_09400 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_09405 PF00005 ABC transporter IBG34_09410 PF04116 Fatty acid hydroxylase superfamily IBG34_09415 PF13520 Amino acid permease IBG34_09430 PF00571 CBS domain IBG34_09430 PF03471 Transporter associated domain IBG34_09430 PF01595 Cyclin M transmembrane N-terminal domain IBG34_09435 PF01895 PhoU domain IBG34_09440 PF00005 ABC transporter IBG34_09445 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_09450 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_09455 PF14437 MafB19-like deaminase IBG34_09475 PF01274 Malate synthase IBG34_09480 PF00463 Isocitrate lyase family IBG34_09485 PF00308 Bacterial dnaA protein IBG34_09500 PF02769 AIR synthase related protein, C-terminal domain IBG34_09500 PF00586 AIR synthase related protein, N-terminal domain IBG34_09505 PF00551 Formyl transferase IBG34_09510 PF01784 NIF3 (NGG1p interacting factor 3) IBG34_09520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_09520 PF00512 His Kinase A (phospho-acceptor) domain IBG34_09520 PF13188 PAS domain IBG34_09525 PF06490 Flagellar regulatory protein FleQ IBG34_09525 PF00158 Sigma-54 interaction domain IBG34_09525 PF02954 Bacterial regulatory protein, Fis family IBG34_09535 PF01842 ACT domain IBG34_09540 PF02503 Polyphosphate kinase middle domain IBG34_09540 PF13090 Polyphosphate kinase C-terminal domain 2 IBG34_09540 PF17941 Polyphosphate kinase C-terminal domain 1 IBG34_09540 PF13089 Polyphosphate kinase N-terminal domain IBG34_09555 PF12323 Helix-turn-helix domain IBG34_09570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IBG34_09570 PF07196 Flagellin hook IN motif IBG34_09580 PF02119 Flagellar P-ring protein IBG34_09585 PF02107 Flagellar L-ring protein IBG34_09590 PF00460 Flagella basal body rod protein IBG34_09590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IBG34_09595 PF00460 Flagella basal body rod protein IBG34_09595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IBG34_09600 PF07559 Flagellar basal body protein FlaE IBG34_09600 PF00460 Flagella basal body rod protein IBG34_09600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IBG34_09610 PF00460 Flagella basal body rod protein IBG34_09610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IBG34_09615 PF00460 Flagella basal body rod protein IBG34_09620 PF01739 CheR methyltransferase, SAM binding domain IBG34_09620 PF03705 CheR methyltransferase, all-alpha domain IBG34_09625 PF00072 Response regulator receiver domain IBG34_09625 PF01584 CheW-like domain IBG34_09630 PF13144 Chaperone for flagella basal body P-ring formation IBG34_09650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IBG34_09660 PF00849 RNA pseudouridylate synthase IBG34_09660 PF01479 S4 domain IBG34_09665 PF11871 Domain of unknown function (DUF3391) IBG34_09665 PF01966 HD domain IBG34_09675 PF00892 EamA-like transporter family IBG34_09680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IBG34_09705 PF00313 'Cold-shock' DNA-binding domain IBG34_09710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IBG34_09710 PF00364 Biotin-requiring enzyme IBG34_09710 PF02817 e3 binding domain IBG34_09715 PF02779 Transketolase, pyrimidine binding domain IBG34_09715 PF02780 Transketolase, C-terminal domain IBG34_09720 PF00676 Dehydrogenase E1 component IBG34_09725 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IBG34_09735 PF05472 DNA replication terminus site-binding protein (Ter protein) IBG34_09745 PF04337 Protein of unknown function, DUF480 IBG34_09765 PF05598 Transposase domain (DUF772) IBG34_09765 PF01609 Transposase DDE domain IBG34_09770 PF02719 Polysaccharide biosynthesis protein IBG34_09775 PF00953 Glycosyl transferase family 4 IBG34_09780 PF01370 NAD dependent epimerase/dehydratase family IBG34_09795 PF02080 TrkA-C domain IBG34_09795 PF03600 Citrate transporter IBG34_09805 PF00009 Elongation factor Tu GTP binding domain IBG34_09810 PF01507 Phosphoadenosine phosphosulfate reductase family IBG34_09825 PF02350 UDP-N-acetylglucosamine 2-epimerase IBG34_09830 PF00535 Glycosyl transferase family 2 IBG34_09835 PF00005 ABC transporter IBG34_09845 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IBG34_09850 PF00483 Nucleotidyl transferase IBG34_09855 PF04321 RmlD substrate binding domain IBG34_09860 PF16363 GDP-mannose 4,6 dehydratase IBG34_09865 PF00486 Transcriptional regulatory protein, C terminal IBG34_09865 PF00072 Response regulator receiver domain IBG34_09870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_09880 PF01418 Helix-turn-helix domain, rpiR family IBG34_09880 PF01380 SIS domain IBG34_09885 PF00224 Pyruvate kinase, barrel domain IBG34_09885 PF02887 Pyruvate kinase, alpha/beta domain IBG34_09900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IBG34_09900 PF02770 Acyl-CoA dehydrogenase, middle domain IBG34_09900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IBG34_09900 PF09317 Domain of unknown function (DUF1974) IBG34_09905 PF00440 Bacterial regulatory proteins, tetR family IBG34_09925 PF09588 YqaJ-like viral recombinase domain IBG34_09945 PF04002 RadC-like JAB domain IBG34_09965 PF01609 Transposase DDE domain IBG34_09965 PF13808 DDE_Tnp_1-associated IBG34_09995 PF01609 Transposase DDE domain IBG34_10005 PF01609 Transposase DDE domain IBG34_10010 PF08240 Alcohol dehydrogenase GroES-like domain IBG34_10010 PF00107 Zinc-binding dehydrogenase IBG34_10060 PF02798 Glutathione S-transferase, N-terminal domain IBG34_10060 PF00043 Glutathione S-transferase, C-terminal domain IBG34_10065 PF01625 Peptide methionine sulfoxide reductase IBG34_10070 PF01641 SelR domain IBG34_10075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_10075 PF03466 LysR substrate binding domain IBG34_10085 PF01625 Peptide methionine sulfoxide reductase IBG34_10100 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IBG34_10120 PF01047 MarR family IBG34_10125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_10125 PF03466 LysR substrate binding domain IBG34_10150 PF13148 Protein of unknown function (DUF3987) IBG34_10160 PF00589 Phage integrase family IBG34_10160 PF13356 Arm DNA-binding domain IBG34_10165 PF13808 DDE_Tnp_1-associated IBG34_10165 PF01609 Transposase DDE domain IBG34_10170 PF00589 Phage integrase family IBG34_10170 PF13356 Arm DNA-binding domain IBG34_10180 PF02321 Outer membrane efflux protein IBG34_10185 PF00873 AcrB/AcrD/AcrF family IBG34_10190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IBG34_10190 PF00529 HlyD membrane-fusion protein of T1SS IBG34_10195 PF08361 MAATS-type transcriptional repressor, C-terminal region IBG34_10195 PF00440 Bacterial regulatory proteins, tetR family IBG34_10215 PF00849 RNA pseudouridylate synthase IBG34_10215 PF01479 S4 domain IBG34_10220 PF04079 Segregation and condensation complex subunit ScpB IBG34_10225 PF02616 Segregation and condensation protein ScpA IBG34_10230 PF01300 Telomere recombination IBG34_10235 PF02811 PHP domain IBG34_10240 PF04715 Anthranilate synthase component I, N terminal region IBG34_10240 PF00425 chorismate binding enzyme IBG34_10245 PF02885 Glycosyl transferase family, helical bundle domain IBG34_10245 PF00117 Glutamine amidotransferase class-I IBG34_10245 PF00591 Glycosyl transferase family, a/b domain IBG34_10260 PF00291 Pyridoxal-phosphate dependent enzyme IBG34_10300 PF04307 LexA-binding, inner membrane-associated putative hydrolase IBG34_10305 PF01381 Helix-turn-helix IBG34_10310 PF13657 HipA N-terminal domain IBG34_10310 PF07804 HipA-like C-terminal domain IBG34_10330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_10330 PF03466 LysR substrate binding domain IBG34_10340 PF07237 Protein of unknown function (DUF1428) IBG34_10345 PF07690 Major Facilitator Superfamily IBG34_10355 PF01040 UbiA prenyltransferase family IBG34_10360 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IBG34_10365 PF00510 Cytochrome c oxidase subunit III IBG34_10370 PF00115 Cytochrome C and Quinol oxidase polypeptide I IBG34_10375 PF06481 COX Aromatic Rich Motif IBG34_10375 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IBG34_10380 PF02627 Carboxymuconolactone decarboxylase family IBG34_10385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_10385 PF03466 LysR substrate binding domain IBG34_10395 PF01156 Inosine-uridine preferring nucleoside hydrolase IBG34_10405 PF00127 Copper binding proteins, plastocyanin/azurin family IBG34_10410 PF02424 ApbE family IBG34_10415 PF00011 Hsp20/alpha crystallin family IBG34_10430 PF03372 Endonuclease/Exonuclease/phosphatase family IBG34_10440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IBG34_10440 PF00529 HlyD membrane-fusion protein of T1SS IBG34_10465 PF00005 ABC transporter IBG34_10465 PF02687 FtsX-like permease family IBG34_10465 PF12704 MacB-like periplasmic core domain IBG34_10470 PF00005 ABC transporter IBG34_10470 PF02687 FtsX-like permease family IBG34_10470 PF12704 MacB-like periplasmic core domain IBG34_10475 PF12704 MacB-like periplasmic core domain IBG34_10475 PF02687 FtsX-like permease family IBG34_10475 PF00005 ABC transporter IBG34_10480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IBG34_10480 PF00529 HlyD membrane-fusion protein of T1SS IBG34_10500 PF04143 Sulphur transport IBG34_10505 PF01022 Bacterial regulatory protein, arsR family IBG34_10520 PF02308 MgtC family IBG34_10525 PF13407 Periplasmic binding protein domain IBG34_10525 PF00356 Bacterial regulatory proteins, lacI family IBG34_10530 PF00251 Glycosyl hydrolases family 32 N-terminal domain IBG34_10530 PF08244 Glycosyl hydrolases family 32 C terminal IBG34_10545 PF11471 Maltoporin periplasmic N-terminal extension IBG34_10545 PF02264 LamB porin IBG34_10550 PF00684 DnaJ central domain IBG34_10550 PF00226 DnaJ domain IBG34_10550 PF01556 DnaJ C terminal domain IBG34_10555 PF00012 Hsp70 protein IBG34_10560 PF01025 GrpE IBG34_10570 PF00990 Diguanylate cyclase, GGDEF domain IBG34_10570 PF17158 Membrane-associated sensor, integral membrane domain IBG34_10590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IBG34_10595 PF00005 ABC transporter IBG34_10595 PF12704 MacB-like periplasmic core domain IBG34_10595 PF02687 FtsX-like permease family IBG34_10600 PF02321 Outer membrane efflux protein IBG34_10605 PF04954 Siderophore-interacting protein IBG34_10605 PF08021 Siderophore-interacting FAD-binding domain IBG34_10610 PF00793 DAHP synthetase I family IBG34_10615 PF00816 H-NS histone family IBG34_10620 PF03466 LysR substrate binding domain IBG34_10620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_10625 PF02447 GntP family permease IBG34_10630 PF00291 Pyridoxal-phosphate dependent enzyme IBG34_10640 PF00180 Isocitrate/isopropylmalate dehydrogenase IBG34_10645 PF12833 Helix-turn-helix domain IBG34_10650 PF01238 Phosphomannose isomerase type I IBG34_10675 PF02368 Bacterial Ig-like domain (group 2) IBG34_10675 PF11999 Protein of unknown function (DUF3494) IBG34_10685 PF00083 Sugar (and other) transporter IBG34_10690 PF17128 Domain of unknown function (DUF5107) IBG34_10690 PF13181 Tetratricopeptide repeat IBG34_10695 PF00480 ROK family IBG34_10705 PF05598 Transposase domain (DUF772) IBG34_10705 PF01609 Transposase DDE domain IBG34_10715 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IBG34_10715 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IBG34_10715 PF02378 Phosphotransferase system, EIIC IBG34_10725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IBG34_10735 PF00849 RNA pseudouridylate synthase IBG34_10740 PF00293 NUDIX domain IBG34_10750 PF04356 Protein of unknown function (DUF489) IBG34_10755 PF08328 Adenylosuccinate lyase C-terminal IBG34_10755 PF00206 Lyase IBG34_10760 PF08007 Cupin superfamily protein IBG34_10765 PF02887 Pyruvate kinase, alpha/beta domain IBG34_10765 PF00224 Pyruvate kinase, barrel domain IBG34_10770 PF12795 Mechanosensitive ion channel porin domain IBG34_10770 PF00924 Mechanosensitive ion channel IBG34_10770 PF12794 Mechanosensitive ion channel inner membrane domain 1 IBG34_10805 PF18818 Metallopeptidase superfamily domain IBG34_10805 PF13362 Toprim domain IBG34_10805 PF08401 Domain of unknown function (DUF1738) IBG34_10830 PF13006 Insertion element 4 transposase N-terminal IBG34_10830 PF01609 Transposase DDE domain IBG34_10835 PF02661 Fic/DOC family IBG34_10835 PF13784 Fic/DOC family N-terminal IBG34_10840 PF01810 LysE type translocator IBG34_10845 PF10282 Lactonase, 7-bladed beta-propeller IBG34_10870 PF00390 Malic enzyme, N-terminal domain IBG34_10870 PF03949 Malic enzyme, NAD binding domain IBG34_10880 PF03205 Molybdopterin guanine dinucleotide synthesis protein B IBG34_10885 PF04632 Fusaric acid resistance protein family IBG34_10900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_10900 PF08447 PAS fold IBG34_10900 PF13426 PAS domain IBG34_10920 PF05114 Protein of unknown function (DUF692) IBG34_10935 PF02028 BCCT, betaine/carnitine/choline family transporter IBG34_10940 PF01609 Transposase DDE domain IBG34_10940 PF13006 Insertion element 4 transposase N-terminal IBG34_10965 PF13474 SnoaL-like domain IBG34_10970 PF14821 Threonine synthase N terminus IBG34_10970 PF00291 Pyridoxal-phosphate dependent enzyme IBG34_10985 PF00588 SpoU rRNA Methylase family IBG34_10990 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) IBG34_11005 PF03737 Aldolase/RraA IBG34_11015 PF00486 Transcriptional regulatory protein, C terminal IBG34_11015 PF00072 Response regulator receiver domain IBG34_11030 PF00664 ABC transporter transmembrane region IBG34_11030 PF00005 ABC transporter IBG34_11035 PF00664 ABC transporter transmembrane region IBG34_11035 PF00005 ABC transporter IBG34_11050 PF16363 GDP-mannose 4,6 dehydratase IBG34_11055 PF18389 TrmO C-terminal domain IBG34_11055 PF01980 tRNA-methyltransferase O IBG34_11060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IBG34_11060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IBG34_11070 PF17862 AAA+ lid domain IBG34_11070 PF00004 ATPase family associated with various cellular activities (AAA) IBG34_11070 PF01434 Peptidase family M41 IBG34_11075 PF00291 Pyridoxal-phosphate dependent enzyme IBG34_11080 PF00381 PTS HPr component phosphorylation site IBG34_11085 PF00391 PEP-utilising enzyme, mobile domain IBG34_11085 PF02896 PEP-utilising enzyme, TIM barrel domain IBG34_11085 PF05524 PEP-utilising enzyme, N-terminal IBG34_11090 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IBG34_11095 PF01292 Prokaryotic cytochrome b561 IBG34_11110 PF13673 Acetyltransferase (GNAT) domain IBG34_11115 PF04381 Putative exonuclease, RdgC IBG34_11130 PF00999 Sodium/hydrogen exchanger family IBG34_11130 PF02254 TrkA-N domain IBG34_11135 PF02954 Bacterial regulatory protein, Fis family IBG34_11135 PF00072 Response regulator receiver domain IBG34_11135 PF00158 Sigma-54 interaction domain IBG34_11165 PF01266 FAD dependent oxidoreductase IBG34_11170 PF07883 Cupin domain IBG34_11170 PF01381 Helix-turn-helix IBG34_11175 PF00171 Aldehyde dehydrogenase family IBG34_11180 PF00202 Aminotransferase class-III IBG34_11185 PF00324 Amino acid permease IBG34_11190 PF13520 Amino acid permease IBG34_11200 PF02690 Na+/Pi-cotransporter IBG34_11205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IBG34_11205 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IBG34_11210 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IBG34_11220 PF10725 Protein of unknown function (DUF2517) IBG34_11250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_11250 PF03466 LysR substrate binding domain IBG34_11255 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IBG34_11265 PF07690 Major Facilitator Superfamily IBG34_11285 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IBG34_11290 PF02416 mttA/Hcf106 family IBG34_11295 PF05573 NosL IBG34_11300 PF12679 ABC-2 family transporter protein IBG34_11310 PF05048 Periplasmic copper-binding protein (NosD) IBG34_11315 PF18793 Nitrous oxide reductase propeller repeat 2 IBG34_11315 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IBG34_11315 PF18764 Nitrous oxide reductase propeller repeat IBG34_11325 PF01418 Helix-turn-helix domain, rpiR family IBG34_11325 PF01380 SIS domain IBG34_11335 PF17969 L,D-transpeptidase C-terminal domain IBG34_11335 PF01476 LysM domain IBG34_11335 PF03734 L,D-transpeptidase catalytic domain IBG34_11345 PF01575 MaoC like domain IBG34_11350 PF05971 RNA methyltransferase IBG34_11355 PF00877 NlpC/P60 family IBG34_11360 PF01648 4'-phosphopantetheinyl transferase superfamily IBG34_11365 PF00085 Thioredoxin IBG34_11375 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IBG34_11380 PF00551 Formyl transferase IBG34_11380 PF01842 ACT domain IBG34_11390 PF13396 Phospholipase_D-nuclease N-terminal IBG34_11390 PF13091 PLD-like domain IBG34_11405 PF01464 Transglycosylase SLT domain IBG34_11405 PF01551 Peptidase family M23 IBG34_11405 PF10145 Phage-related minor tail protein IBG34_11410 PF00230 Major intrinsic protein IBG34_11415 PF02075 Crossover junction endodeoxyribonuclease RuvC IBG34_11420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IBG34_11440 PF01609 Transposase DDE domain IBG34_11440 PF05598 Transposase domain (DUF772) IBG34_11445 PF11842 Domain of unknown function (DUF3362) IBG34_11445 PF04055 Radical SAM superfamily IBG34_11445 PF08497 Radical SAM N-terminal IBG34_11460 PF00990 Diguanylate cyclase, GGDEF domain IBG34_11460 PF05230 MASE2 domain IBG34_11470 PF00209 Sodium:neurotransmitter symporter family IBG34_11485 PF01389 OmpA-like transmembrane domain IBG34_11485 PF00691 OmpA family IBG34_11490 PF00691 OmpA family IBG34_11490 PF01389 OmpA-like transmembrane domain IBG34_11495 PF01389 OmpA-like transmembrane domain IBG34_11495 PF00691 OmpA family IBG34_11500 PF03949 Malic enzyme, NAD binding domain IBG34_11500 PF00390 Malic enzyme, N-terminal domain IBG34_11505 PF12833 Helix-turn-helix domain IBG34_11510 PF01554 MatE IBG34_11525 PF10692 Protein of unknown function (DUF2498) IBG34_11530 PF00990 Diguanylate cyclase, GGDEF domain IBG34_11530 PF00072 Response regulator receiver domain IBG34_11535 PF00860 Permease family IBG34_11540 PF13006 Insertion element 4 transposase N-terminal IBG34_11540 PF01609 Transposase DDE domain IBG34_11550 PF01235 Sodium:alanine symporter family IBG34_11555 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IBG34_11555 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IBG34_11560 PF01699 Sodium/calcium exchanger protein IBG34_11565 PF08534 Redoxin IBG34_11570 PF00293 NUDIX domain IBG34_11580 PF00005 ABC transporter IBG34_11590 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_11595 PF00497 Bacterial extracellular solute-binding proteins, family 3 IBG34_11610 PF00005 ABC transporter IBG34_11615 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IBG34_11615 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IBG34_11630 PF03932 CutC family IBG34_11635 PF00480 ROK family IBG34_11645 PF01435 Peptidase family M48 IBG34_11650 PF12849 PBP superfamily domain IBG34_11655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_11655 PF00512 His Kinase A (phospho-acceptor) domain IBG34_11655 PF00989 PAS fold IBG34_11655 PF11808 Phosphate regulon sensor protein PhoR IBG34_11660 PF00072 Response regulator receiver domain IBG34_11660 PF00486 Transcriptional regulatory protein, C terminal IBG34_11665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IBG34_11670 PF17158 Membrane-associated sensor, integral membrane domain IBG34_11670 PF00990 Diguanylate cyclase, GGDEF domain IBG34_11680 PF00171 Aldehyde dehydrogenase family IBG34_11690 PF00892 EamA-like transporter family IBG34_11695 PF00072 Response regulator receiver domain IBG34_11695 PF12431 Transcriptional regulator IBG34_11705 PF00390 Malic enzyme, N-terminal domain IBG34_11705 PF03949 Malic enzyme, NAD binding domain IBG34_11715 PF01047 MarR family IBG34_11720 PF00529 HlyD membrane-fusion protein of T1SS IBG34_11720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IBG34_11735 PF01609 Transposase DDE domain IBG34_11735 PF13006 Insertion element 4 transposase N-terminal IBG34_11745 PF01679 Proteolipid membrane potential modulator IBG34_11755 PF13597 Anaerobic ribonucleoside-triphosphate reductase IBG34_11755 PF03477 ATP cone domain IBG34_11770 PF04354 ZipA, C-terminal FtsZ-binding domain IBG34_11785 PF03458 UPF0126 domain IBG34_11795 PF05951 Bacterial protein of unknown function (DUF882) IBG34_11800 PF03734 L,D-transpeptidase catalytic domain IBG34_11800 PF01471 Putative peptidoglycan binding domain IBG34_11865 PF00999 Sodium/hydrogen exchanger family IBG34_11865 PF02080 TrkA-C domain IBG34_11865 PF02254 TrkA-N domain IBG34_11870 PF00990 Diguanylate cyclase, GGDEF domain IBG34_11880 PF01431 Peptidase family M13 IBG34_11880 PF05649 Peptidase family M13 IBG34_11895 PF16326 ABC transporter C-terminal domain IBG34_11895 PF00005 ABC transporter IBG34_11895 PF12848 ABC transporter IBG34_11915 PF01385 Probable transposase IBG34_11915 PF12323 Helix-turn-helix domain IBG34_11915 PF07282 Putative transposase DNA-binding domain IBG34_11930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_11930 PF03466 LysR substrate binding domain IBG34_11940 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IBG34_11945 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IBG34_11945 PF07733 Bacterial DNA polymerase III alpha NTPase domain IBG34_11945 PF02811 PHP domain IBG34_11945 PF01336 OB-fold nucleic acid binding domain IBG34_11945 PF14579 Helix-hairpin-helix motif IBG34_11950 PF01351 Ribonuclease HII IBG34_11955 PF02684 Lipid-A-disaccharide synthetase IBG34_11960 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IBG34_11960 PF00132 Bacterial transferase hexapeptide (six repeats) IBG34_11965 PF07977 FabA-like domain IBG34_11970 PF00132 Bacterial transferase hexapeptide (six repeats) IBG34_11970 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IBG34_11975 PF03938 Outer membrane protein (OmpH-like) IBG34_11980 PF01103 Surface antigen IBG34_11980 PF07244 Surface antigen variable number repeat IBG34_11985 PF17820 PDZ domain IBG34_11985 PF02163 Peptidase family M50 IBG34_11990 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IBG34_11990 PF13288 DXP reductoisomerase C-terminal domain IBG34_11990 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IBG34_12000 PF01255 Putative undecaprenyl diphosphate synthase IBG34_12005 PF01765 Ribosome recycling factor IBG34_12010 PF00696 Amino acid kinase family IBG34_12015 PF00889 Elongation factor TS IBG34_12020 PF00318 Ribosomal protein S2 IBG34_12025 PF00557 Metallopeptidase family M24 IBG34_12030 PF01842 ACT domain IBG34_12030 PF08335 GlnD PII-uridylyltransferase IBG34_12030 PF01966 HD domain IBG34_12030 PF01909 Nucleotidyltransferase domain IBG34_12035 PF00132 Bacterial transferase hexapeptide (six repeats) IBG34_12035 PF14602 Hexapeptide repeat of succinyl-transferase IBG34_12035 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IBG34_12040 PF11944 Protein of unknown function (DUF3461) IBG34_12045 PF02378 Phosphotransferase system, EIIC IBG34_12045 PF00367 phosphotransferase system, EIIB IBG34_12050 PF07148 Maltose operon periplasmic protein precursor (MalM) IBG34_12055 PF02264 LamB porin IBG34_12060 PF00258 Flavodoxin IBG34_12065 PF00849 RNA pseudouridylate synthase IBG34_12070 PF04287 tRNA pseudouridine synthase C IBG34_12095 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) IBG34_12100 PF07348 Syd protein (SUKH-2) IBG34_12105 PF14489 QueF-like protein IBG34_12105 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IBG34_12120 PF11892 Domain of unknown function (DUF3412) IBG34_12120 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases IBG34_12120 PF03641 Possible lysine decarboxylase IBG34_12125 PF01367 5'-3' exonuclease, C-terminal SAM fold IBG34_12125 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IBG34_12135 PF00180 Isocitrate/isopropylmalate dehydrogenase IBG34_12135 PF18324 Hypothetical protein TT1725 IBG34_12145 PF01728 FtsJ-like methyltransferase IBG34_12145 PF18125 RlmM ferredoxin-like domain IBG34_12150 PF04241 Protein of unknown function (DUF423) IBG34_12160 PF03466 LysR substrate binding domain IBG34_12160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_12165 PF00672 HAMP domain IBG34_12165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_12170 PF00817 impB/mucB/samB family IBG34_12170 PF11799 impB/mucB/samB family C-terminal domain IBG34_12170 PF11798 IMS family HHH motif IBG34_12185 PF02424 ApbE family IBG34_12190 PF00111 2Fe-2S iron-sulfur cluster binding domain IBG34_12190 PF00970 Oxidoreductase FAD-binding domain IBG34_12190 PF00175 Oxidoreductase NAD-binding domain IBG34_12195 PF02508 Rnf-Nqr subunit, membrane protein IBG34_12200 PF02508 Rnf-Nqr subunit, membrane protein IBG34_12205 PF04205 FMN-binding domain IBG34_12210 PF03116 NQR2, RnfD, RnfE family IBG34_12215 PF11973 NQRA C-terminal domain IBG34_12215 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) IBG34_12225 PF01722 BolA-like protein IBG34_12230 PF05175 Methyltransferase small domain IBG34_12240 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IBG34_12250 PF07690 Major Facilitator Superfamily IBG34_12255 PF03502 Nucleoside-specific channel-forming protein, Tsx IBG34_12260 PF04461 Protein of unknown function (DUF520) IBG34_12265 PF02558 Ketopantoate reductase PanE/ApbA IBG34_12265 PF08546 Ketopantoate reductase PanE/ApbA C terminal IBG34_12270 PF01965 DJ-1/PfpI family IBG34_12285 PF13276 HTH-like domain IBG34_12285 PF01527 Transposase IBG34_12285 PF00665 Integrase core domain IBG34_12310 PF04545 Sigma-70, region 4 IBG34_12310 PF04542 Sigma-70 region 2 IBG34_12315 PF03960 ArsC family IBG34_12320 PF01758 Sodium Bile acid symporter family IBG34_12330 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IBG34_12330 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IBG34_12345 PF13356 Arm DNA-binding domain IBG34_12345 PF00589 Phage integrase family IBG34_12355 PF05930 Prophage CP4-57 regulatory protein (AlpA) IBG34_12445 PF04002 RadC-like JAB domain IBG34_12495 PF02342 TerD domain IBG34_12525 PF00005 ABC transporter IBG34_12535 PF03781 Sulfatase-modifying factor enzyme 1 IBG34_12545 PF05154 TM2 domain IBG34_12565 PF16363 GDP-mannose 4,6 dehydratase IBG34_12570 PF00970 Oxidoreductase FAD-binding domain IBG34_12570 PF00175 Oxidoreductase NAD-binding domain IBG34_12570 PF00111 2Fe-2S iron-sulfur cluster binding domain IBG34_12575 PF03063 Prismane/CO dehydrogenase family IBG34_12580 PF00210 Ferritin-like domain IBG34_12620 PF00106 short chain dehydrogenase IBG34_12630 PF00875 DNA photolyase IBG34_12630 PF03441 FAD binding domain of DNA photolyase IBG34_12635 PF13411 MerR HTH family regulatory protein IBG34_12640 PF08349 Protein of unknown function (DUF1722) IBG34_12665 PF00800 Prephenate dehydratase IBG34_12665 PF01817 Chorismate mutase type II IBG34_12695 PF01740 STAS domain IBG34_12695 PF00916 Sulfate permease family IBG34_12700 PF07995 Glucose / Sorbosone dehydrogenase IBG34_12710 PF08220 DeoR-like helix-turn-helix domain IBG34_12710 PF00455 DeoR C terminal sensor domain IBG34_12715 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IBG34_12715 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IBG34_12720 PF07005 Sugar-binding N-terminal domain IBG34_12720 PF17042 Nucleotide-binding C-terminal domain IBG34_12725 PF00596 Class II Aldolase and Adducin N-terminal domain IBG34_12730 PF01261 Xylose isomerase-like TIM barrel IBG34_12735 PF01370 NAD dependent epimerase/dehydratase family IBG34_12740 PF02447 GntP family permease IBG34_12750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_12755 PF03573 outer membrane porin, OprD family IBG34_12760 PF00106 short chain dehydrogenase IBG34_12785 PF02074 Carboxypeptidase Taq (M32) metallopeptidase IBG34_12790 PF12833 Helix-turn-helix domain IBG34_12790 PF00730 HhH-GPD superfamily base excision DNA repair protein IBG34_12790 PF06029 AlkA N-terminal domain IBG34_12790 PF02805 Metal binding domain of Ada IBG34_12795 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IBG34_12795 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IBG34_12805 PF06906 Protein of unknown function (DUF1272) IBG34_12820 PF13808 DDE_Tnp_1-associated IBG34_12820 PF01609 Transposase DDE domain IBG34_12825 PF13592 Winged helix-turn helix IBG34_12825 PF13358 DDE superfamily endonuclease IBG34_12830 PF01136 Peptidase family U32 IBG34_12830 PF12392 Collagenase IBG34_12850 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IBG34_12850 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IBG34_12895 PF13247 4Fe-4S dicluster domain IBG34_12910 PF00072 Response regulator receiver domain IBG34_12910 PF00196 Bacterial regulatory proteins, luxR family IBG34_12915 PF03575 Peptidase family S51 IBG34_12920 PF07690 Major Facilitator Superfamily IBG34_12925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IBG34_12925 PF00529 HlyD membrane-fusion protein of T1SS IBG34_12935 PF00206 Lyase IBG34_12935 PF10415 Fumarase C C-terminus IBG34_12950 PF00842 Alanine racemase, C-terminal domain IBG34_12950 PF01168 Alanine racemase, N-terminal domain IBG34_12955 PF03796 DnaB-like helicase C terminal domain IBG34_12955 PF00772 DnaB-like helicase N terminal domain IBG34_12965 PF02872 5'-nucleotidase, C-terminal domain IBG34_12965 PF00149 Calcineurin-like phosphoesterase IBG34_12985 PF02954 Bacterial regulatory protein, Fis family IBG34_12985 PF00072 Response regulator receiver domain IBG34_12985 PF00158 Sigma-54 interaction domain IBG34_12990 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IBG34_12990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IBG34_13000 PF04102 SlyX IBG34_13005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IBG34_13010 PF09526 Probable metal-binding protein (DUF2387) IBG34_13025 PF00561 alpha/beta hydrolase fold IBG34_13030 PF00360 Phytochrome region IBG34_13030 PF00563 EAL domain IBG34_13030 PF00990 Diguanylate cyclase, GGDEF domain IBG34_13030 PF01590 GAF domain IBG34_13035 PF06794 Uncharacterised protein family (UPF0270) IBG34_13040 PF00485 Phosphoribulokinase / Uridine kinase family IBG34_13055 PF02566 OsmC-like protein IBG34_13060 PF13545 Crp-like helix-turn-helix domain IBG34_13060 PF00027 Cyclic nucleotide-binding domain IBG34_13065 PF08241 Methyltransferase domain IBG34_13070 PF08329 Chitinase A, N-terminal domain IBG34_13070 PF00704 Glycosyl hydrolases family 18 IBG34_13080 PF12832 MFS_1 like family IBG34_13085 PF00593 TonB dependent receptor IBG34_13085 PF07715 TonB-dependent Receptor Plug Domain IBG34_13105 PF01243 Pyridoxamine 5'-phosphate oxidase IBG34_13110 PF06228 Haem utilisation ChuX/HutX IBG34_13120 PF01032 FecCD transport family IBG34_13125 PF00005 ABC transporter IBG34_13135 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IBG34_13135 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IBG34_13135 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IBG34_13140 PF01370 NAD dependent epimerase/dehydratase family IBG34_13145 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase IBG34_13165 PF00005 ABC transporter IBG34_13165 PF12848 ABC transporter IBG34_13175 PF00860 Permease family IBG34_13180 PF00226 DnaJ domain IBG34_13180 PF05099 Tellurite resistance protein TerB IBG34_13190 PF01636 Phosphotransferase enzyme family IBG34_13200 PF00639 PPIC-type PPIASE domain IBG34_13200 PF09312 SurA N-terminal domain IBG34_13205 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IBG34_13210 PF00398 Ribosomal RNA adenine dimethylase IBG34_13215 PF04379 ApaG domain IBG34_13220 PF00149 Calcineurin-like phosphoesterase IBG34_13245 PF01926 50S ribosome-binding GTPase IBG34_13245 PF01018 GTP1/OBG IBG34_13250 PF01016 Ribosomal L27 protein IBG34_13255 PF00829 Ribosomal prokaryotic L21 protein IBG34_13265 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) IBG34_13270 PF01145 SPFH domain / Band 7 family IBG34_13275 PF01145 SPFH domain / Band 7 family IBG34_13275 PF12221 Bacterial membrane protein N terminal IBG34_13280 PF01926 50S ribosome-binding GTPase IBG34_13280 PF16360 GTP-binding GTPase Middle Region IBG34_13280 PF13167 GTP-binding GTPase N-terminal IBG34_13285 PF17209 Hfq protein IBG34_13295 PF01119 DNA mismatch repair protein, C-terminal domain IBG34_13295 PF08676 MutL C terminal dimerisation domain IBG34_13300 PF01520 N-acetylmuramoyl-L-alanine amidase IBG34_13305 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IBG34_13310 PF01256 Carbohydrate kinase IBG34_13310 PF03853 YjeF-related protein N-terminus IBG34_13330 PF00005 ABC transporter IBG34_13330 PF09383 NIL domain IBG34_13335 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_13340 PF03180 NLPA lipoprotein IBG34_13345 PF02357 Transcription termination factor nusG IBG34_13350 PF00672 HAMP domain IBG34_13350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_13355 PF00563 EAL domain IBG34_13355 PF03707 Bacterial signalling protein N terminal repeat IBG34_13355 PF00990 Diguanylate cyclase, GGDEF domain IBG34_13370 PF01966 HD domain IBG34_13370 PF13286 Phosphohydrolase-associated domain IBG34_13375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_13375 PF00512 His Kinase A (phospho-acceptor) domain IBG34_13375 PF18415 Histidine kinase receptor ArcB trans-membrane domain IBG34_13375 PF01627 Hpt domain IBG34_13375 PF00989 PAS fold IBG34_13375 PF00072 Response regulator receiver domain IBG34_13400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_13400 PF03466 LysR substrate binding domain IBG34_13410 PF01259 SAICAR synthetase IBG34_13415 PF06804 NlpB/DapX lipoprotein IBG34_13420 PF00701 Dihydrodipicolinate synthetase family IBG34_13425 PF01842 ACT domain IBG34_13430 PF00578 AhpC/TSA family IBG34_13435 PF03887 YfbU domain IBG34_13440 PF04217 Protein of unknown function, DUF412 IBG34_13445 PF00871 Acetokinase family IBG34_13450 PF07085 DRTGG domain IBG34_13450 PF01515 Phosphate acetyl/butaryl transferase IBG34_13455 PF10369 Small subunit of acetolactate synthase IBG34_13460 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IBG34_13460 PF00205 Thiamine pyrophosphate enzyme, central domain IBG34_13460 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IBG34_13470 PF03033 Glycosyltransferase family 28 N-terminal domain IBG34_13470 PF04101 Glycosyltransferase family 28 C-terminal domain IBG34_13475 PF01569 PAP2 superfamily IBG34_13485 PF01609 Transposase DDE domain IBG34_13490 PF00682 HMGL-like IBG34_13490 PF08502 LeuA allosteric (dimerisation) domain IBG34_13495 PF00180 Isocitrate/isopropylmalate dehydrogenase IBG34_13500 PF00330 Aconitase family (aconitate hydratase) IBG34_13505 PF00694 Aconitase C-terminal domain IBG34_13530 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_13535 PF00005 ABC transporter IBG34_13540 PF02562 PhoH-like protein IBG34_13540 PF13638 PIN domain IBG34_13550 PF02867 Ribonucleotide reductase, barrel domain IBG34_13550 PF08343 Ribonucleotide reductase N-terminal IBG34_13550 PF00317 Ribonucleotide reductase, all-alpha domain IBG34_13580 PF01521 Iron-sulphur cluster biosynthesis IBG34_13595 PF00202 Aminotransferase class-III IBG34_13610 PF01569 PAP2 superfamily IBG34_13620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_13620 PF03466 LysR substrate binding domain IBG34_13625 PF00893 Small Multidrug Resistance protein IBG34_13630 PF00893 Small Multidrug Resistance protein IBG34_13635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IBG34_13655 PF03749 Sugar fermentation stimulation protein RE domain IBG34_13655 PF17746 SfsA N-terminal OB domain IBG34_13660 PF01258 Prokaryotic dksA/traR C4-type zinc finger IBG34_13665 PF00749 tRNA synthetases class I (E and Q), catalytic domain IBG34_13670 PF12627 Probable RNA and SrmB- binding site of polymerase A IBG34_13670 PF12626 Polymerase A arginine-rich C-terminus IBG34_13670 PF01743 Poly A polymerase head domain IBG34_13675 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IBG34_13685 PF02569 Pantoate-beta-alanine ligase IBG34_13695 PF01061 ABC-2 type transporter IBG34_13700 PF00005 ABC transporter IBG34_13705 PF00156 Phosphoribosyl transferase domain IBG34_13710 PF00440 Bacterial regulatory proteins, tetR family IBG34_13715 PF02441 Flavoprotein IBG34_13720 PF02875 Mur ligase family, glutamate ligase domain IBG34_13720 PF08245 Mur ligase middle domain IBG34_13720 PF01225 Mur ligase family, catalytic domain IBG34_13725 PF00719 Inorganic pyrophosphatase IBG34_13740 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) IBG34_13755 PF00005 ABC transporter IBG34_13775 PF12729 Four helix bundle sensory module for signal transduction IBG34_13775 PF00672 HAMP domain IBG34_13775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_13785 PF01609 Transposase DDE domain IBG34_13785 PF05598 Transposase domain (DUF772) IBG34_13800 PF02080 TrkA-C domain IBG34_13800 PF03600 Citrate transporter IBG34_13805 PF00009 Elongation factor Tu GTP binding domain IBG34_13810 PF01507 Phosphoadenosine phosphosulfate reductase family IBG34_13820 PF16200 C-terminal region of band_7 IBG34_13820 PF01145 SPFH domain / Band 7 family IBG34_13825 PF01957 NfeD-like C-terminal, partner-binding IBG34_13835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IBG34_13835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IBG34_13840 PF07690 Major Facilitator Superfamily IBG34_13845 PF01725 Ham1 family IBG34_13850 PF04055 Radical SAM superfamily IBG34_13850 PF06969 HemN C-terminal domain IBG34_13855 PF03889 Alternative ribosome-rescue factor A IBG34_13865 PF13411 MerR HTH family regulatory protein IBG34_13870 PF01808 AICARFT/IMPCHase bienzyme IBG34_13870 PF02142 MGS-like domain IBG34_13875 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IBG34_13875 PF02843 Phosphoribosylglycinamide synthetase, C domain IBG34_13875 PF02844 Phosphoribosylglycinamide synthetase, N domain IBG34_13905 PF04542 Sigma-70 region 2 IBG34_13905 PF04546 Sigma-70, non-essential region IBG34_13905 PF03979 Sigma-70 factor, region 1.1 IBG34_13905 PF00140 Sigma-70 factor, region 1.2 IBG34_13905 PF04545 Sigma-70, region 4 IBG34_13905 PF04539 Sigma-70 region 3 IBG34_13910 PF10410 DnaB-helicase binding domain of primase IBG34_13910 PF08278 DNA primase DnaG DnaB-binding IBG34_13910 PF08275 DNA primase catalytic core, N-terminal domain IBG34_13910 PF01807 CHC2 zinc finger IBG34_13915 PF09424 Yqey-like protein IBG34_13920 PF01165 Ribosomal protein S21 IBG34_13925 PF00814 Glycoprotease family IBG34_13935 PF01476 LysM domain IBG34_13935 PF01551 Peptidase family M23 IBG34_13950 PF01975 Survival protein SurE IBG34_13955 PF01142 tRNA pseudouridine synthase D (TruD) IBG34_13960 PF02542 YgbB family IBG34_13965 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IBG34_13970 PF04977 Septum formation initiator IBG34_13975 PF03952 Enolase, N-terminal domain IBG34_13975 PF00113 Enolase, C-terminal TIM barrel domain IBG34_13980 PF06418 CTP synthase N-terminus IBG34_13980 PF00117 Glutamine amidotransferase class-I IBG34_13985 PF03819 MazG nucleotide pyrophosphohydrolase domain IBG34_14000 PF00672 HAMP domain IBG34_14000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_14000 PF00512 His Kinase A (phospho-acceptor) domain IBG34_14000 PF01627 Hpt domain IBG34_14000 PF00072 Response regulator receiver domain IBG34_14000 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IBG34_14005 PF07308 Protein of unknown function (DUF1456) IBG34_14010 PF01510 N-acetylmuramoyl-L-alanine amidase IBG34_14015 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IBG34_14020 PF11967 Recombination protein O N terminal IBG34_14020 PF02565 Recombination protein O C terminal IBG34_14025 PF07650 KH domain IBG34_14025 PF01926 50S ribosome-binding GTPase IBG34_14030 PF14622 Ribonuclease-III-like IBG34_14030 PF00035 Double-stranded RNA binding motif IBG34_14035 PF10502 Signal peptidase, peptidase S26 IBG34_14040 PF06421 GTP-binding protein LepA C-terminus IBG34_14040 PF03144 Elongation factor Tu domain 2 IBG34_14040 PF00009 Elongation factor Tu GTP binding domain IBG34_14040 PF00679 Elongation factor G C-terminus IBG34_14055 PF03872 Anti sigma-E protein RseA, N-terminal domain IBG34_14055 PF03873 Anti sigma-E protein RseA, C-terminal domain IBG34_14060 PF04542 Sigma-70 region 2 IBG34_14060 PF08281 Sigma-70, region 4 IBG34_14065 PF02910 Fumarate reductase flavoprotein C-term IBG34_14065 PF00890 FAD binding domain IBG34_14075 PF03937 Flavinator of succinate dehydrogenase IBG34_14080 PF01571 Aminomethyltransferase folate-binding domain IBG34_14085 PF03466 LysR substrate binding domain IBG34_14085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_14100 PF03091 CutA1 divalent ion tolerance protein IBG34_14115 PF01266 FAD dependent oxidoreductase IBG34_14120 PF01116 Fructose-bisphosphate aldolase class-II IBG34_14125 PF00162 Phosphoglycerate kinase IBG34_14130 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IBG34_14130 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IBG34_14140 PF01208 Uroporphyrinogen decarboxylase (URO-D) IBG34_14145 PF00293 NUDIX domain IBG34_14145 PF09297 NADH pyrophosphatase zinc ribbon domain IBG34_14150 PF08239 Bacterial SH3 domain IBG34_14155 PF00027 Cyclic nucleotide-binding domain IBG34_14155 PF00520 Ion transport protein IBG34_14160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_14160 PF00672 HAMP domain IBG34_14185 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IBG34_14185 PF00326 Prolyl oligopeptidase family IBG34_14190 PF13194 Domain of unknown function (DUF4010) IBG34_14195 PF12464 Maltose acetyltransferase IBG34_14195 PF14602 Hexapeptide repeat of succinyl-transferase IBG34_14205 PF00367 phosphotransferase system, EIIB IBG34_14205 PF02378 Phosphotransferase system, EIIC IBG34_14210 PF01547 Bacterial extracellular solute-binding protein IBG34_14215 PF00512 His Kinase A (phospho-acceptor) domain IBG34_14215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_14215 PF08521 Two-component sensor kinase N-terminal IBG34_14220 PF00486 Transcriptional regulatory protein, C terminal IBG34_14220 PF00072 Response regulator receiver domain IBG34_14240 PF14552 Tautomerase enzyme IBG34_14255 PF14698 Argininosuccinate lyase C-terminal IBG34_14255 PF00206 Lyase IBG34_14265 PF00764 Arginosuccinate synthase IBG34_14270 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IBG34_14270 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IBG34_14275 PF00696 Amino acid kinase family IBG34_14280 PF01118 Semialdehyde dehydrogenase, NAD binding domain IBG34_14280 PF02774 Semialdehyde dehydrogenase, dimerisation domain IBG34_14285 PF07687 Peptidase dimerisation domain IBG34_14285 PF01546 Peptidase family M20/M25/M40 IBG34_14290 PF00311 Phosphoenolpyruvate carboxylase IBG34_14295 PF13006 Insertion element 4 transposase N-terminal IBG34_14295 PF01609 Transposase DDE domain IBG34_14305 PF04073 Aminoacyl-tRNA editing domain IBG34_14330 PF00155 Aminotransferase class I and II IBG34_14330 PF00392 Bacterial regulatory proteins, gntR family IBG34_14340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_14340 PF03466 LysR substrate binding domain IBG34_14345 PF03788 LrgA family IBG34_14350 PF04172 LrgB-like family IBG34_14360 PF01053 Cys/Met metabolism PLP-dependent enzyme IBG34_14365 PF01340 Met Apo-repressor, MetJ IBG34_14370 PF02311 AraC-like ligand binding domain IBG34_14370 PF12833 Helix-turn-helix domain IBG34_14375 PF01588 Putative tRNA binding domain IBG34_14380 PF03222 Tryptophan/tyrosine permease family IBG34_14390 PF00293 NUDIX domain IBG34_14395 PF13419 Haloacid dehalogenase-like hydrolase IBG34_14400 PF01479 S4 domain IBG34_14400 PF00579 tRNA synthetases class I (W and Y) IBG34_14405 PF00196 Bacterial regulatory proteins, luxR family IBG34_14410 PF01203 Type II secretion system (T2SS), protein N IBG34_14415 PF04612 Type II secretion system (T2SS), protein M IBG34_14420 PF12693 GspL periplasmic domain IBG34_14420 PF05134 Type II secretion system (T2SS), protein L IBG34_14425 PF03934 Type II secretion system (T2SS), protein K IBG34_14430 PF11612 Type II secretion system (T2SS), protein J IBG34_14430 PF07963 Prokaryotic N-terminal methylation motif IBG34_14435 PF02501 Type II secretion system (T2SS), protein I IBG34_14435 PF07963 Prokaryotic N-terminal methylation motif IBG34_14445 PF08334 Type II secretion system (T2SS), protein G IBG34_14445 PF07963 Prokaryotic N-terminal methylation motif IBG34_14450 PF00482 Type II secretion system (T2SS), protein F IBG34_14455 PF00437 Type II/IV secretion system protein IBG34_14460 PF03958 Bacterial type II/III secretion system short domain IBG34_14460 PF00263 Bacterial type II and III secretion system protein IBG34_14465 PF11356 Type II secretion system protein C IBG34_14470 PF01479 S4 domain IBG34_14475 PF01430 Hsp33 protein IBG34_14480 PF01293 Phosphoenolpyruvate carboxykinase IBG34_14490 PF01321 Creatinase/Prolidase N-terminal domain IBG34_14490 PF00557 Metallopeptidase family M24 IBG34_14500 PF05433 Glycine zipper 2TM domain IBG34_14505 PF01928 CYTH domain IBG34_14510 PF01865 Protein of unknown function DUF47 IBG34_14515 PF01384 Phosphate transporter family IBG34_14520 PF12627 Probable RNA and SrmB- binding site of polymerase A IBG34_14520 PF01966 HD domain IBG34_14520 PF01743 Poly A polymerase head domain IBG34_14525 PF13401 AAA domain IBG34_14525 PF01471 Putative peptidoglycan binding domain IBG34_14530 PF16537 Type II secretion system protein B IBG34_14540 PF04362 Bacterial Fe(2+) trafficking IBG34_14545 PF01464 Transglycosylase SLT domain IBG34_14545 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain IBG34_14560 PF01389 OmpA-like transmembrane domain IBG34_14560 PF00691 OmpA family IBG34_14565 PF03886 ABC-type transport auxiliary lipoprotein component IBG34_14570 PF02470 MlaD protein IBG34_14575 PF04403 Paraquat-inducible protein A IBG34_14580 PF17209 Hfq protein IBG34_14585 PF13419 Haloacid dehalogenase-like hydrolase IBG34_14590 PF00360 Phytochrome region IBG34_14590 PF00990 Diguanylate cyclase, GGDEF domain IBG34_14590 PF01590 GAF domain IBG34_14590 PF00563 EAL domain IBG34_14595 PF00701 Dihydrodipicolinate synthetase family IBG34_14600 PF05175 Methyltransferase small domain IBG34_14600 PF08468 Methyltransferase small domain N-terminal IBG34_14610 PF08323 Starch synthase catalytic domain IBG34_14610 PF00534 Glycosyl transferases group 1 IBG34_14640 PF03553 Na+/H+ antiporter family IBG34_14645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_14645 PF03466 LysR substrate binding domain IBG34_14650 PF13416 Bacterial extracellular solute-binding protein IBG34_14655 PF08402 TOBE domain IBG34_14655 PF00005 ABC transporter IBG34_14660 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_14665 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_14670 PF00171 Aldehyde dehydrogenase family IBG34_14675 PF01040 UbiA prenyltransferase family IBG34_14680 PF02628 Cytochrome oxidase assembly protein IBG34_14700 PF00510 Cytochrome c oxidase subunit III IBG34_14705 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 IBG34_14710 PF00115 Cytochrome C and Quinol oxidase polypeptide I IBG34_14715 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IBG34_14715 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IBG34_14720 PF05127 Helicase IBG34_14720 PF17176 tRNA-binding domain IBG34_14720 PF13718 GNAT acetyltransferase 2 IBG34_14720 PF08351 Domain of unknown function (DUF1726) IBG34_14735 PF00210 Ferritin-like domain IBG34_14740 PF02142 MGS-like domain IBG34_14755 PF00710 Asparaginase, N-terminal IBG34_14755 PF17763 Glutaminase/Asparaginase C-terminal domain IBG34_14765 PF00356 Bacterial regulatory proteins, lacI family IBG34_14775 PF00480 ROK family IBG34_14780 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit IBG34_14795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IBG34_14810 PF00356 Bacterial regulatory proteins, lacI family IBG34_14815 PF00367 phosphotransferase system, EIIB IBG34_14815 PF02378 Phosphotransferase system, EIIC IBG34_14820 PF11941 Domain of unknown function (DUF3459) IBG34_14820 PF00128 Alpha amylase, catalytic domain IBG34_14825 PF12464 Maltose acetyltransferase IBG34_14825 PF14602 Hexapeptide repeat of succinyl-transferase IBG34_14830 PF01037 Lrp/AsnC ligand binding domain IBG34_14835 PF00892 EamA-like transporter family IBG34_14855 PF01389 OmpA-like transmembrane domain IBG34_14855 PF00691 OmpA family IBG34_14885 PF02152 Dihydroneopterin aldolase IBG34_14890 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IBG34_14895 PF00672 HAMP domain IBG34_14895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_14895 PF12729 Four helix bundle sensory module for signal transduction IBG34_14900 PF07690 Major Facilitator Superfamily IBG34_14905 PF02492 CobW/HypB/UreG, nucleotide-binding domain IBG34_14905 PF07683 Cobalamin synthesis protein cobW C-terminal domain IBG34_14915 PF01810 LysE type translocator IBG34_14920 PF03466 LysR substrate binding domain IBG34_14920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_14925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_14925 PF03466 LysR substrate binding domain IBG34_14935 PF12792 CSS motif domain associated with EAL IBG34_14935 PF00563 EAL domain IBG34_14940 PF12792 CSS motif domain associated with EAL IBG34_14940 PF00563 EAL domain IBG34_14945 PF00330 Aconitase family (aconitate hydratase) IBG34_14945 PF06434 Aconitate hydratase 2 N-terminus IBG34_14945 PF11791 Aconitate B N-terminal domain IBG34_14955 PF02743 Cache domain IBG34_14955 PF00672 HAMP domain IBG34_14955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_14960 PF00672 HAMP domain IBG34_14960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_14960 PF12729 Four helix bundle sensory module for signal transduction IBG34_14965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IBG34_14965 PF07992 Pyridine nucleotide-disulphide oxidoreductase IBG34_14970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IBG34_14970 PF00364 Biotin-requiring enzyme IBG34_14970 PF02817 e3 binding domain IBG34_14975 PF17831 Pyruvate dehydrogenase E1 component middle domain IBG34_14975 PF00456 Transketolase, thiamine diphosphate binding domain IBG34_14980 PF07729 FCD domain IBG34_14980 PF00392 Bacterial regulatory proteins, gntR family IBG34_14985 PF01510 N-acetylmuramoyl-L-alanine amidase IBG34_14995 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IBG34_14995 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IBG34_15000 PF07963 Prokaryotic N-terminal methylation motif IBG34_15015 PF01478 Type IV leader peptidase family IBG34_15015 PF06750 Bacterial Peptidase A24 N-terminal domain IBG34_15020 PF01121 Dephospho-CoA kinase IBG34_15025 PF07072 Cell division protein IBG34_15030 PF03884 DNA gyrase inhibitor YacG IBG34_15035 PF00293 NUDIX domain IBG34_15050 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IBG34_15055 PF00091 Tubulin/FtsZ family, GTPase domain IBG34_15055 PF12327 FtsZ family, C-terminal domain IBG34_15060 PF02491 SHS2 domain inserted in FTSA IBG34_15065 PF08478 POTRA domain, FtsQ-type IBG34_15065 PF03799 Cell division protein FtsQ IBG34_15075 PF04101 Glycosyltransferase family 28 C-terminal domain IBG34_15075 PF03033 Glycosyltransferase family 28 N-terminal domain IBG34_15080 PF01098 Cell cycle protein IBG34_15085 PF02875 Mur ligase family, glutamate ligase domain IBG34_15085 PF08245 Mur ligase middle domain IBG34_15090 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 IBG34_15090 PF00953 Glycosyl transferase family 4 IBG34_15095 PF08245 Mur ligase middle domain IBG34_15095 PF01225 Mur ligase family, catalytic domain IBG34_15095 PF02875 Mur ligase family, glutamate ligase domain IBG34_15100 PF02875 Mur ligase family, glutamate ligase domain IBG34_15100 PF01225 Mur ligase family, catalytic domain IBG34_15100 PF08245 Mur ligase middle domain IBG34_15105 PF00905 Penicillin binding protein transpeptidase domain IBG34_15105 PF03717 Penicillin-binding Protein dimerisation domain IBG34_15110 PF04999 Cell division protein FtsL IBG34_15115 PF01795 MraW methylase family IBG34_15120 PF02381 MraZ protein, putative antitoxin-like IBG34_15130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IBG34_15135 PF04348 LppC putative lipoprotein IBG34_15140 PF02021 Uncharacterised protein family UPF0102 IBG34_15145 PF13580 SIS domain IBG34_15150 PF04972 BON domain IBG34_15155 PF04386 Stringent starvation protein B IBG34_15160 PF00043 Glutathione S-transferase, C-terminal domain IBG34_15160 PF02798 Glutathione S-transferase, N-terminal domain IBG34_15165 PF02167 Cytochrome C1 family IBG34_15170 PF00032 Cytochrome b(C-terminal)/b6/petD IBG34_15170 PF00033 Cytochrome b/b6/petB IBG34_15175 PF00355 Rieske [2Fe-2S] domain IBG34_15175 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal IBG34_15180 PF00380 Ribosomal protein S9/S16 IBG34_15185 PF00572 Ribosomal protein L13 IBG34_15190 PF03969 AFG1-like ATPase IBG34_15200 PF13180 PDZ domain IBG34_15200 PF00595 PDZ domain IBG34_15205 PF13180 PDZ domain IBG34_15235 PF01979 Amidohydrolase family IBG34_15240 PF03841 L-seryl-tRNA selenium transferase IBG34_15245 PF07071 KDGP aldolase IBG34_15250 PF05043 Mga helix-turn-helix domain IBG34_15250 PF08279 HTH domain IBG34_15250 PF00874 PRD domain IBG34_15250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IBG34_15255 PF00381 PTS HPr component phosphorylation site IBG34_15260 PF03668 P-loop ATPase protein family IBG34_15265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IBG34_15270 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IBG34_15275 PF04552 Sigma-54, DNA binding domain IBG34_15275 PF04963 Sigma-54 factor, core binding domain IBG34_15275 PF00309 Sigma-54 factor, Activator interacting domain (AID) IBG34_15280 PF12399 Branched-chain amino acid ATP-binding cassette transporter IBG34_15280 PF00005 ABC transporter IBG34_15285 PF03968 OstA-like protein IBG34_15290 PF06835 Lipopolysaccharide-assembly, LptC-related IBG34_15300 PF00571 CBS domain IBG34_15300 PF01380 SIS domain IBG34_15305 PF00005 ABC transporter IBG34_15310 PF02405 Permease MlaE IBG34_15315 PF02470 MlaD protein IBG34_15320 PF05494 MlaC protein IBG34_15330 PF01722 BolA-like protein IBG34_15335 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IBG34_15345 PF01523 Putative modulator of DNA gyrase IBG34_15350 PF04751 Protein of unknown function (DUF615) IBG34_15360 PF04363 Protein of unknown function (DUF496) IBG34_15390 PF07883 Cupin domain IBG34_15390 PF01381 Helix-turn-helix IBG34_15395 PF03594 Benzoate membrane transport protein IBG34_15405 PF02219 Methylenetetrahydrofolate reductase IBG34_15420 PF12729 Four helix bundle sensory module for signal transduction IBG34_15420 PF00672 HAMP domain IBG34_15420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_15425 PF03922 OmpW family IBG34_15430 PF17760 UvrA interaction domain IBG34_15430 PF17755 UvrA DNA-binding domain IBG34_15430 PF00005 ABC transporter IBG34_15440 PF03692 Putative zinc- or iron-chelating domain IBG34_15445 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded IBG34_15450 PF00267 Gram-negative porin IBG34_15455 PF13508 Acetyltransferase (GNAT) domain IBG34_15455 PF00583 Acetyltransferase (GNAT) family IBG34_15480 PF06055 Exopolysaccharide synthesis, ExoD IBG34_15485 PF00990 Diguanylate cyclase, GGDEF domain IBG34_15495 PF13036 Peptidoglycan-synthase activator LpoB IBG34_15500 PF00132 Bacterial transferase hexapeptide (six repeats) IBG34_15510 PF06968 Biotin and Thiamin Synthesis associated domain IBG34_15510 PF04055 Radical SAM superfamily IBG34_15515 PF05690 Thiazole biosynthesis protein ThiG IBG34_15525 PF00899 ThiF family IBG34_15530 PF02581 Thiamine monophosphate synthase IBG34_15535 PF13667 ThiC-associated domain IBG34_15535 PF01964 Radical SAM ThiC family IBG34_15550 PF17425 Arylsulfotransferase Ig-like domain IBG34_15550 PF05935 Arylsulfotransferase (ASST) IBG34_15575 PF00072 Response regulator receiver domain IBG34_15575 PF00486 Transcriptional regulatory protein, C terminal IBG34_15600 PF02574 Homocysteine S-methyltransferase IBG34_15600 PF02965 Vitamin B12 dependent methionine synthase, activation domain IBG34_15600 PF02607 B12 binding domain IBG34_15600 PF02310 B12 binding domain IBG34_15600 PF00809 Pterin binding enzyme IBG34_15605 PF00999 Sodium/hydrogen exchanger family IBG34_15615 PF14659 Phage integrase, N-terminal SAM-like domain IBG34_15615 PF13356 Arm DNA-binding domain IBG34_15615 PF00589 Phage integrase family IBG34_15655 PF04320 Protein with unknown function (DUF469) IBG34_15690 PF04228 Putative neutral zinc metallopeptidase IBG34_15700 PF07690 Major Facilitator Superfamily IBG34_15705 PF01914 MarC family integral membrane protein IBG34_15720 PF00795 Carbon-nitrogen hydrolase IBG34_15730 PF00575 S1 RNA binding domain IBG34_15730 PF10150 Ribonuclease E/G family IBG34_15735 PF02545 Maf-like protein IBG34_15740 PF04093 rod shape-determining protein MreD IBG34_15745 PF04085 rod shape-determining protein MreC IBG34_15775 PF07963 Prokaryotic N-terminal methylation motif IBG34_15775 PF00114 Pilin (bacterial filament) IBG34_15780 PF07963 Prokaryotic N-terminal methylation motif IBG34_15780 PF08334 Type II secretion system (T2SS), protein G IBG34_15800 PF00437 Type II/IV secretion system protein IBG34_15800 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IBG34_15815 PF00263 Bacterial type II and III secretion system protein IBG34_15815 PF03958 Bacterial type II/III secretion system short domain IBG34_15855 PF01699 Sodium/calcium exchanger protein IBG34_15860 PF00221 Aromatic amino acid lyase IBG34_15865 PF01175 Urocanase Rossmann-like domain IBG34_15865 PF17392 Urocanase C-terminal domain IBG34_15865 PF17391 Urocanase N-terminal domain IBG34_15870 PF00491 Arginase family IBG34_15880 PF00392 Bacterial regulatory proteins, gntR family IBG34_15880 PF07702 UTRA domain IBG34_15885 PF00484 Carbonic anhydrase IBG34_15890 PF00140 Sigma-70 factor, region 1.2 IBG34_15890 PF04542 Sigma-70 region 2 IBG34_15890 PF04545 Sigma-70, region 4 IBG34_15895 PF18075 FtsX extracellular domain IBG34_15900 PF00005 ABC transporter IBG34_15905 PF00448 SRP54-type protein, GTPase domain IBG34_15905 PF02881 SRP54-type protein, helical bundle domain IBG34_15920 PF07226 Protein of unknown function (DUF1422) IBG34_15925 PF00440 Bacterial regulatory proteins, tetR family IBG34_15935 PF13091 PLD-like domain IBG34_15945 PF00497 Bacterial extracellular solute-binding proteins, family 3 IBG34_15945 PF01464 Transglycosylase SLT domain IBG34_15955 PF02416 mttA/Hcf106 family IBG34_15960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_15960 PF03466 LysR substrate binding domain IBG34_15965 PF01914 MarC family integral membrane protein IBG34_15970 PF10678 Protein of unknown function (DUF2492) IBG34_15975 PF00375 Sodium:dicarboxylate symporter family IBG34_15985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_15985 PF03466 LysR substrate binding domain IBG34_15990 PF13533 Biotin-lipoyl like IBG34_16000 PF07947 YhhN family IBG34_16020 PF00326 Prolyl oligopeptidase family IBG34_16020 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IBG34_16035 PF00106 short chain dehydrogenase IBG34_16040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_16040 PF03466 LysR substrate binding domain IBG34_16045 PF02525 Flavodoxin-like fold IBG34_16050 PF00999 Sodium/hydrogen exchanger family IBG34_16050 PF02254 TrkA-N domain IBG34_16065 PF00665 Integrase core domain IBG34_16070 PF01695 IstB-like ATP binding protein IBG34_16105 PF01196 Ribosomal protein L17 IBG34_16110 PF01000 RNA polymerase Rpb3/RpoA insert domain IBG34_16110 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IBG34_16110 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IBG34_16115 PF01479 S4 domain IBG34_16115 PF00163 Ribosomal protein S4/S9 N-terminal domain IBG34_16120 PF00411 Ribosomal protein S11 IBG34_16125 PF00416 Ribosomal protein S13/S18 IBG34_16130 PF00444 Ribosomal protein L36 IBG34_16135 PF00344 SecY translocase IBG34_16140 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IBG34_16145 PF00327 Ribosomal protein L30p/L7e IBG34_16150 PF00333 Ribosomal protein S5, N-terminal domain IBG34_16150 PF03719 Ribosomal protein S5, C-terminal domain IBG34_16155 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IBG34_16160 PF00347 Ribosomal protein L6 IBG34_16165 PF00410 Ribosomal protein S8 IBG34_16170 PF00253 Ribosomal protein S14p/S29e IBG34_16175 PF00673 ribosomal L5P family C-terminus IBG34_16175 PF00281 Ribosomal protein L5 IBG34_16180 PF00467 KOW motif IBG34_16180 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IBG34_16185 PF00238 Ribosomal protein L14p/L23e IBG34_16190 PF00366 Ribosomal protein S17 IBG34_16195 PF00831 Ribosomal L29 protein IBG34_16200 PF00252 Ribosomal protein L16p/L10e IBG34_16205 PF07650 KH domain IBG34_16205 PF00189 Ribosomal protein S3, C-terminal domain IBG34_16210 PF00237 Ribosomal protein L22p/L17e IBG34_16215 PF00203 Ribosomal protein S19 IBG34_16220 PF00181 Ribosomal Proteins L2, RNA binding domain IBG34_16220 PF03947 Ribosomal Proteins L2, C-terminal domain IBG34_16225 PF00276 Ribosomal protein L23 IBG34_16230 PF00573 Ribosomal protein L4/L1 family IBG34_16235 PF00297 Ribosomal protein L3 IBG34_16240 PF00338 Ribosomal protein S10p/S20e IBG34_16250 PF00672 HAMP domain IBG34_16250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_16250 PF00512 His Kinase A (phospho-acceptor) domain IBG34_16255 PF00072 Response regulator receiver domain IBG34_16255 PF00486 Transcriptional regulatory protein, C terminal IBG34_16265 PF00575 S1 RNA binding domain IBG34_16265 PF09371 Tex-like protein N-terminal domain IBG34_16265 PF16921 Tex protein YqgF-like domain IBG34_16265 PF17674 HHH domain IBG34_16290 PF00156 Phosphoribosyl transferase domain IBG34_16295 PF01521 Iron-sulphur cluster biosynthesis IBG34_16295 PF01106 NifU-like domain IBG34_16300 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IBG34_16300 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IBG34_16305 PF02556 Preprotein translocase subunit SecB IBG34_16310 PF00581 Rhodanese-like domain IBG34_16315 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IBG34_16315 PF01676 Metalloenzyme superfamily IBG34_16320 PF01551 Peptidase family M23 IBG34_16330 PF00356 Bacterial regulatory proteins, lacI family IBG34_16330 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IBG34_16345 PF01081 KDPG and KHG aldolase IBG34_16350 PF00920 Dehydratase family IBG34_16355 PF01202 Shikimate kinase IBG34_16360 PF02447 GntP family permease IBG34_16370 PF00270 DEAD/DEAH box helicase IBG34_16370 PF00271 Helicase conserved C-terminal domain IBG34_16370 PF17191 RecG wedge domain IBG34_16380 PF00583 Acetyltransferase (GNAT) family IBG34_16380 PF09500 Putative thioesterase (yiiD_Cterm) IBG34_16390 PF02580 D-Tyr-tRNA(Tyr) deacylase IBG34_16395 PF03631 Virulence factor BrkB IBG34_16400 PF03631 Virulence factor BrkB IBG34_16405 PF00009 Elongation factor Tu GTP binding domain IBG34_16405 PF03144 Elongation factor Tu domain 2 IBG34_16405 PF00679 Elongation factor G C-terminus IBG34_16410 PF00120 Glutamine synthetase, catalytic domain IBG34_16410 PF03951 Glutamine synthetase, beta-Grasp domain IBG34_16420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_16420 PF00512 His Kinase A (phospho-acceptor) domain IBG34_16420 PF00989 PAS fold IBG34_16425 PF02954 Bacterial regulatory protein, Fis family IBG34_16425 PF00072 Response regulator receiver domain IBG34_16425 PF00158 Sigma-54 interaction domain IBG34_16430 PF00962 Adenosine/AMP deaminase IBG34_16435 PF04055 Radical SAM superfamily IBG34_16435 PF06969 HemN C-terminal domain IBG34_16440 PF10675 Protein of unknown function (DUF2489) IBG34_16445 PF04220 Der GTPase activator (YihI) IBG34_16450 PF00034 Cytochrome c IBG34_16455 PF01926 50S ribosome-binding GTPase IBG34_16460 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IBG34_16460 PF01488 Shikimate / quinate 5-dehydrogenase IBG34_16460 PF08501 Shikimate dehydrogenase substrate binding domain IBG34_16465 PF01218 Coproporphyrinogen III oxidase IBG34_16470 PF01300 Telomere recombination IBG34_16475 PF01396 Topoisomerase DNA binding C4 zinc finger IBG34_16480 PF04361 Protein of unknown function (DUF494) IBG34_16495 PF01327 Polypeptide deformylase IBG34_16500 PF02911 Formyl transferase, C-terminal domain IBG34_16500 PF00551 Formyl transferase IBG34_16515 PF02386 Cation transport protein IBG34_16535 PF02082 Transcriptional regulator IBG34_16540 PF00294 pfkB family carbohydrate kinase IBG34_16550 PF00117 Glutamine amidotransferase class-I IBG34_16550 PF00958 GMP synthase C terminal domain IBG34_16550 PF02540 NAD synthase IBG34_16555 PF00171 Aldehyde dehydrogenase family IBG34_16560 PF00202 Aminotransferase class-III IBG34_16565 PF07883 Cupin domain IBG34_16565 PF01381 Helix-turn-helix IBG34_16580 PF00892 EamA-like transporter family IBG34_16585 PF12833 Helix-turn-helix domain IBG34_16595 PF04143 Sulphur transport IBG34_16600 PF01810 LysE type translocator IBG34_16605 PF03466 LysR substrate binding domain IBG34_16605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_16610 PF06206 CpeT/CpcT family (DUF1001) IBG34_16635 PF14001 YdfZ protein IBG34_16645 PF02801 Beta-ketoacyl synthase, C-terminal domain IBG34_16645 PF00109 Beta-ketoacyl synthase, N-terminal domain IBG34_16655 PF13006 Insertion element 4 transposase N-terminal IBG34_16655 PF01609 Transposase DDE domain IBG34_16670 PF04972 BON domain IBG34_16685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_16685 PF03466 LysR substrate binding domain IBG34_16710 PF13808 DDE_Tnp_1-associated IBG34_16710 PF01609 Transposase DDE domain IBG34_16715 PF01609 Transposase DDE domain IBG34_16725 PF13361 UvrD-like helicase C-terminal domain IBG34_16725 PF00580 UvrD/REP helicase N-terminal domain IBG34_16730 PF13361 UvrD-like helicase C-terminal domain IBG34_16730 PF00580 UvrD/REP helicase N-terminal domain IBG34_16745 PF02608 ABC transporter substrate-binding protein PnrA-like IBG34_16750 PF00005 ABC transporter IBG34_16755 PF02653 Branched-chain amino acid transport system / permease component IBG34_16760 PF02653 Branched-chain amino acid transport system / permease component IBG34_16765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_16765 PF03466 LysR substrate binding domain IBG34_16770 PF00107 Zinc-binding dehydrogenase IBG34_16770 PF08240 Alcohol dehydrogenase GroES-like domain IBG34_16775 PF00756 Putative esterase IBG34_16790 PF12867 DinB superfamily IBG34_16790 PF03781 Sulfatase-modifying factor enzyme 1 IBG34_16800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_16800 PF03466 LysR substrate binding domain IBG34_16830 PF13593 SBF-like CPA transporter family (DUF4137) IBG34_16835 PF13520 Amino acid permease IBG34_16840 PF01588 Putative tRNA binding domain IBG34_16845 PF13520 Amino acid permease IBG34_16850 PF13520 Amino acid permease IBG34_16855 PF04074 YhcH/YjgK/YiaL IBG34_16860 PF02929 Beta galactosidase small chain IBG34_16860 PF00703 Glycosyl hydrolases family 2 IBG34_16860 PF16353 Domain of unknown function(DUF4981) IBG34_16860 PF02837 Glycosyl hydrolases family 2, sugar binding domain IBG34_16860 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IBG34_16865 PF00356 Bacterial regulatory proteins, lacI family IBG34_16905 PF00132 Bacterial transferase hexapeptide (six repeats) IBG34_16910 PF01367 5'-3' exonuclease, C-terminal SAM fold IBG34_16910 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IBG34_16910 PF00476 DNA polymerase family A IBG34_16910 PF01612 3'-5' exonuclease IBG34_16920 PF06005 Cell division protein ZapB IBG34_16930 PF00132 Bacterial transferase hexapeptide (six repeats) IBG34_16930 PF06426 Serine acetyltransferase, N-terminal IBG34_16935 PF01545 Cation efflux family IBG34_16935 PF16916 Dimerisation domain of Zinc Transporter IBG34_16940 PF00486 Transcriptional regulatory protein, C terminal IBG34_16940 PF00072 Response regulator receiver domain IBG34_16945 PF00672 HAMP domain IBG34_16945 PF16527 Two-component sensor protein CpxA, periplasmic domain IBG34_16945 PF00512 His Kinase A (phospho-acceptor) domain IBG34_16945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_16950 PF00588 SpoU rRNA Methylase family IBG34_16970 PF00717 Peptidase S24-like IBG34_16970 PF01726 LexA DNA binding domain IBG34_16975 PF01553 Acyltransferase IBG34_16980 PF01609 Transposase DDE domain IBG34_16980 PF13006 Insertion element 4 transposase N-terminal IBG34_16985 PF01040 UbiA prenyltransferase family IBG34_16990 PF04345 Chorismate lyase IBG34_16995 PF03748 Flagellar basal body-associated protein FliL IBG34_17010 PF08240 Alcohol dehydrogenase GroES-like domain IBG34_17010 PF00107 Zinc-binding dehydrogenase IBG34_17015 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IBG34_17015 PF00356 Bacterial regulatory proteins, lacI family IBG34_17020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IBG34_17030 PF03611 PTS system sugar-specific permease component IBG34_17045 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) IBG34_17065 PF01370 NAD dependent epimerase/dehydratase family IBG34_17070 PF08360 QacR-like protein, C-terminal region IBG34_17070 PF00440 Bacterial regulatory proteins, tetR family IBG34_17075 PF00155 Aminotransferase class I and II IBG34_17080 PF08240 Alcohol dehydrogenase GroES-like domain IBG34_17080 PF00107 Zinc-binding dehydrogenase IBG34_17090 PF00563 EAL domain IBG34_17090 PF00990 Diguanylate cyclase, GGDEF domain IBG34_17090 PF03707 Bacterial signalling protein N terminal repeat IBG34_17095 PF00580 UvrD/REP helicase N-terminal domain IBG34_17095 PF13361 UvrD-like helicase C-terminal domain IBG34_17100 PF00266 Aminotransferase class-V IBG34_17105 PF02657 Fe-S metabolism associated domain IBG34_17110 PF00899 ThiF family IBG34_17140 PF12724 Flavodoxin domain IBG34_17145 PF02386 Cation transport protein IBG34_17150 PF09186 Domain of unknown function (DUF1949) IBG34_17150 PF01205 Uncharacterized protein family UPF0029 IBG34_17155 PF00557 Metallopeptidase family M24 IBG34_17165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IBG34_17165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IBG34_17165 PF00378 Enoyl-CoA hydratase/isomerase IBG34_17170 PF00108 Thiolase, N-terminal domain IBG34_17170 PF02803 Thiolase, C-terminal domain IBG34_17175 PF00072 Response regulator receiver domain IBG34_17175 PF00486 Transcriptional regulatory protein, C terminal IBG34_17180 PF00672 HAMP domain IBG34_17180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_17180 PF00512 His Kinase A (phospho-acceptor) domain IBG34_17185 PF01547 Bacterial extracellular solute-binding protein IBG34_17205 PF01042 Endoribonuclease L-PSP IBG34_17210 PF13488 Glycine zipper IBG34_17210 PF00691 OmpA family IBG34_17235 PF03352 Methyladenine glycosylase IBG34_17240 PF02091 Glycyl-tRNA synthetase alpha subunit IBG34_17245 PF05746 DALR anticodon binding domain IBG34_17245 PF02092 Glycyl-tRNA synthetase beta subunit IBG34_17250 PF01609 Transposase DDE domain IBG34_17300 PF03222 Tryptophan/tyrosine permease family IBG34_17305 PF03222 Tryptophan/tyrosine permease family IBG34_17310 PF01212 Beta-eliminating lyase IBG34_17320 PF12801 4Fe-4S binding domain IBG34_17330 PF07992 Pyridine nucleotide-disulphide oxidoreductase IBG34_17330 PF18113 Rubredoxin binding C-terminal domain IBG34_17335 PF00258 Flavodoxin IBG34_17335 PF00753 Metallo-beta-lactamase superfamily IBG34_17335 PF00301 Rubredoxin IBG34_17345 PF01609 Transposase DDE domain IBG34_17345 PF13006 Insertion element 4 transposase N-terminal IBG34_17350 PF00356 Bacterial regulatory proteins, lacI family IBG34_17355 PF13458 Periplasmic binding protein IBG34_17370 PF00005 ABC transporter IBG34_17370 PF12399 Branched-chain amino acid ATP-binding cassette transporter IBG34_17375 PF00005 ABC transporter IBG34_17380 PF12833 Helix-turn-helix domain IBG34_17390 PF00581 Rhodanese-like domain IBG34_17395 PF01694 Rhomboid family IBG34_17395 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease IBG34_17405 PF04380 Membrane fusogenic activity IBG34_17410 PF00175 Oxidoreductase NAD-binding domain IBG34_17415 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IBG34_17425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IBG34_17425 PF07497 Rho termination factor, RNA-binding domain IBG34_17425 PF07498 Rho termination factor, N-terminal domain IBG34_17430 PF00085 Thioredoxin IBG34_17435 PF00270 DEAD/DEAH box helicase IBG34_17435 PF00271 Helicase conserved C-terminal domain IBG34_17440 PF02541 Ppx/GppA phosphatase family IBG34_17450 PF04445 Putative SAM-dependent methyltransferase IBG34_17455 PF00563 EAL domain IBG34_17455 PF00990 Diguanylate cyclase, GGDEF domain IBG34_17455 PF03707 Bacterial signalling protein N terminal repeat IBG34_17460 PF01432 Peptidase family M3 IBG34_17465 PF00490 Delta-aminolevulinic acid dehydratase IBG34_17470 PF01026 TatD related DNase IBG34_17475 PF00902 Sec-independent protein translocase protein (TatC) IBG34_17480 PF02416 mttA/Hcf106 family IBG34_17485 PF02416 mttA/Hcf106 family IBG34_17490 PF03109 ABC1 family IBG34_17495 PF02036 SCP-2 sterol transfer family IBG34_17500 PF01209 ubiE/COQ5 methyltransferase family IBG34_17505 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IBG34_17510 PF07969 Amidohydrolase family IBG34_17550 PF03544 Gram-negative bacterial TonB protein C-terminal IBG34_17555 PF02472 Biopolymer transport protein ExbD/TolR IBG34_17560 PF01618 MotA/TolQ/ExbB proton channel family IBG34_17565 PF01618 MotA/TolQ/ExbB proton channel family IBG34_17575 PF00196 Bacterial regulatory proteins, luxR family IBG34_17575 PF03472 Autoinducer binding domain IBG34_17585 PF01380 SIS domain IBG34_17585 PF00571 CBS domain IBG34_17590 PF08220 DeoR-like helix-turn-helix domain IBG34_17590 PF00455 DeoR C terminal sensor domain IBG34_17600 PF00106 short chain dehydrogenase IBG34_17605 PF03829 PTS system glucitol/sorbitol-specific IIA component IBG34_17610 PF07663 Sorbitol phosphotransferase enzyme II C-terminus IBG34_17610 PF03612 Sorbitol phosphotransferase enzyme II N-terminus IBG34_17615 PF03608 PTS system enzyme II sorbitol-specific factor IBG34_17630 PF00923 Transaldolase/Fructose-6-phosphate aldolase IBG34_17635 PF00342 Phosphoglucose isomerase IBG34_17640 PF13419 Haloacid dehalogenase-like hydrolase IBG34_17655 PF13419 Haloacid dehalogenase-like hydrolase IBG34_17660 PF13737 Transposase DDE domain IBG34_17670 PF12793 Sugar transport-related sRNA regulator N-term IBG34_17670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IBG34_17700 PF18623 TnsE C-terminal domain IBG34_17705 PF15978 Tn7-like transposition protein D IBG34_17705 PF06527 TniQ IBG34_17710 PF11426 Tn7 transposition regulator TnsC IBG34_17710 PF13401 AAA domain IBG34_17715 PF00665 Integrase core domain IBG34_17720 PF08721 TnsA endonuclease C terminal IBG34_17720 PF08722 TnsA endonuclease N terminal IBG34_17725 PF01380 SIS domain IBG34_17730 PF08220 DeoR-like helix-turn-helix domain IBG34_17730 PF00455 DeoR C terminal sensor domain IBG34_17735 PF00486 Transcriptional regulatory protein, C terminal IBG34_17735 PF00072 Response regulator receiver domain IBG34_17740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_17740 PF00672 HAMP domain IBG34_17740 PF00512 His Kinase A (phospho-acceptor) domain IBG34_17745 PF00905 Penicillin binding protein transpeptidase domain IBG34_17750 PF06123 Inner membrane protein CreD IBG34_17755 PF00132 Bacterial transferase hexapeptide (six repeats) IBG34_17755 PF12804 MobA-like NTP transferase domain IBG34_17755 PF14602 Hexapeptide repeat of succinyl-transferase IBG34_17760 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain IBG34_17760 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IBG34_17765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IBG34_17765 PF02874 ATP synthase alpha/beta family, beta-barrel domain IBG34_17770 PF00231 ATP synthase IBG34_17775 PF00306 ATP synthase alpha/beta chain, C terminal domain IBG34_17775 PF02874 ATP synthase alpha/beta family, beta-barrel domain IBG34_17775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IBG34_17780 PF00213 ATP synthase delta (OSCP) subunit IBG34_17785 PF00430 ATP synthase B/B' CF(0) IBG34_17790 PF00137 ATP synthase subunit C IBG34_17795 PF00119 ATP synthase A chain IBG34_17805 PF02195 ParB-like nuclease domain IBG34_17805 PF17762 HTH domain found in ParB protein IBG34_17810 PF13614 AAA domain IBG34_17815 PF02527 rRNA small subunit methyltransferase G IBG34_17820 PF01134 Glucose inhibited division protein A IBG34_17820 PF13932 GidA associated domain IBG34_17825 PF00258 Flavodoxin IBG34_17830 PF00593 TonB dependent receptor IBG34_17830 PF07715 TonB-dependent Receptor Plug Domain IBG34_17835 PF00005 ABC transporter IBG34_17840 PF00005 ABC transporter IBG34_17845 PF01497 Periplasmic binding protein IBG34_17855 PF07804 HipA-like C-terminal domain IBG34_17855 PF13657 HipA N-terminal domain IBG34_17870 PF08463 EcoEI R protein C-terminal IBG34_17870 PF04851 Type III restriction enzyme, res subunit IBG34_17870 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) IBG34_17870 PF00271 Helicase conserved C-terminal domain IBG34_17875 PF12161 HsdM N-terminal domain IBG34_17875 PF02384 N-6 DNA Methylase IBG34_17880 PF01420 Type I restriction modification DNA specificity domain IBG34_17895 PF13592 Winged helix-turn helix IBG34_17895 PF13358 DDE superfamily endonuclease IBG34_17935 PF01348 Type II intron maturase IBG34_17935 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IBG34_17940 PF01548 Transposase IBG34_17940 PF02371 Transposase IS116/IS110/IS902 family IBG34_17945 PF02796 Helix-turn-helix domain of resolvase IBG34_17945 PF00239 Resolvase, N terminal domain IBG34_17980 PF01526 Tn3 transposase DDE domain IBG34_17980 PF13700 Domain of unknown function (DUF4158) IBG34_17985 PF02371 Transposase IS116/IS110/IS902 family IBG34_17985 PF01548 Transposase IBG34_17990 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IBG34_17995 PF01609 Transposase DDE domain IBG34_18005 PF01609 Transposase DDE domain IBG34_18030 PF13438 Domain of unknown function (DUF4113) IBG34_18030 PF11799 impB/mucB/samB family C-terminal domain IBG34_18030 PF00817 impB/mucB/samB family IBG34_18035 PF00717 Peptidase S24-like IBG34_18045 PF02384 N-6 DNA Methylase IBG34_18050 PF01420 Type I restriction modification DNA specificity domain IBG34_18080 PF01272 Transcription elongation factor, GreA/GreB, C-term IBG34_18080 PF03449 Transcription elongation factor, N-terminal IBG34_18100 PF00589 Phage integrase family IBG34_18100 PF02899 Phage integrase, N-terminal SAM-like domain IBG34_18105 PF01926 50S ribosome-binding GTPase IBG34_18105 PF12631 MnmE helical domain IBG34_18105 PF10396 GTP-binding protein TrmE N-terminus IBG34_18110 PF14849 YidC periplasmic domain IBG34_18110 PF02096 60Kd inner membrane protein IBG34_18115 PF01809 Putative membrane protein insertion efficiency factor IBG34_18120 PF00825 Ribonuclease P IBG34_18125 PF00468 Ribosomal protein L34 IBG34_18130 PF00005 ABC transporter IBG34_18135 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_18140 PF00497 Bacterial extracellular solute-binding proteins, family 3 IBG34_18145 PF00308 Bacterial dnaA protein IBG34_18145 PF08299 Bacterial dnaA protein helix-turn-helix IBG34_18145 PF11638 DnaA N-terminal domain IBG34_18150 PF00712 DNA polymerase III beta subunit, N-terminal domain IBG34_18150 PF02767 DNA polymerase III beta subunit, central domain IBG34_18150 PF02768 DNA polymerase III beta subunit, C-terminal domain IBG34_18155 PF02463 RecF/RecN/SMC N terminal domain IBG34_18160 PF01751 Toprim domain IBG34_18160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_18160 PF18053 DNA gyrase B subunit insert domain IBG34_18160 PF00986 DNA gyrase B subunit, carboxyl terminus IBG34_18160 PF00204 DNA gyrase B IBG34_18165 PF01965 DJ-1/PfpI family IBG34_18165 PF12833 Helix-turn-helix domain IBG34_18170 PF12706 Beta-lactamase superfamily domain IBG34_18175 PF00011 Hsp20/alpha crystallin family IBG34_18180 PF00011 Hsp20/alpha crystallin family IBG34_18200 PF07690 Major Facilitator Superfamily IBG34_18205 PF00486 Transcriptional regulatory protein, C terminal IBG34_18205 PF00072 Response regulator receiver domain IBG34_18215 PF02669 K+-transporting ATPase, c chain IBG34_18225 PF03814 Potassium-transporting ATPase A subunit IBG34_18235 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IBG34_18260 PF01695 IstB-like ATP binding protein IBG34_18265 PF00665 Integrase core domain IBG34_18290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IBG34_18290 PF07992 Pyridine nucleotide-disulphide oxidoreductase IBG34_18295 PF00512 His Kinase A (phospho-acceptor) domain IBG34_18295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_18295 PF00497 Bacterial extracellular solute-binding proteins, family 3 IBG34_18300 PF00873 AcrB/AcrD/AcrF family IBG34_18305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IBG34_18310 PF00440 Bacterial regulatory proteins, tetR family IBG34_18350 PF12146 Serine aminopeptidase, S33 IBG34_18355 PF00132 Bacterial transferase hexapeptide (six repeats) IBG34_18360 PF12105 SpoU, rRNA methylase, C-terminal IBG34_18360 PF00588 SpoU rRNA Methylase family IBG34_18365 PF13291 ACT domain IBG34_18365 PF04607 Region found in RelA / SpoT proteins IBG34_18365 PF02824 TGS domain IBG34_18370 PF01192 RNA polymerase Rpb6 IBG34_18375 PF00625 Guanylate kinase IBG34_18380 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IBG34_18395 PF00892 EamA-like transporter family IBG34_18415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_18415 PF03466 LysR substrate binding domain IBG34_18420 PF00579 tRNA synthetases class I (W and Y) IBG34_18425 PF00582 Universal stress protein family IBG34_18430 PF07055 Enoyl reductase FAD binding domain IBG34_18430 PF12241 Trans-2-enoyl-CoA reductase catalytic region IBG34_18430 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase IBG34_18435 PF00990 Diguanylate cyclase, GGDEF domain IBG34_18435 PF05230 MASE2 domain IBG34_18440 PF00210 Ferritin-like domain IBG34_18450 PF07690 Major Facilitator Superfamily IBG34_18455 PF01810 LysE type translocator IBG34_18460 PF07694 5TMR of 5TMR-LYT IBG34_18460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_18460 PF06580 Histidine kinase IBG34_18465 PF04397 LytTr DNA-binding domain IBG34_18465 PF00072 Response regulator receiver domain IBG34_18470 PF07690 Major Facilitator Superfamily IBG34_18475 PF02222 ATP-grasp domain IBG34_18475 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IBG34_18480 PF00731 AIR carboxylase IBG34_18485 PF07715 TonB-dependent Receptor Plug Domain IBG34_18485 PF00593 TonB dependent receptor IBG34_18490 PF01177 Asp/Glu/Hydantoin racemase IBG34_18525 PF00583 Acetyltransferase (GNAT) family IBG34_18525 PF13607 Succinyl-CoA ligase like flavodoxin domain IBG34_18525 PF13380 CoA binding domain IBG34_18535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_18535 PF03466 LysR substrate binding domain IBG34_18540 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IBG34_18540 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IBG34_18545 PF00342 Phosphoglucose isomerase IBG34_18550 PF00924 Mechanosensitive ion channel IBG34_18550 PF05552 Conserved TM helix IBG34_18560 PF00440 Bacterial regulatory proteins, tetR family IBG34_18570 PF00692 dUTPase IBG34_18590 PF01609 Transposase DDE domain IBG34_18610 PF00816 H-NS histone family IBG34_18640 PF02321 Outer membrane efflux protein IBG34_18660 PF01695 IstB-like ATP binding protein IBG34_18665 PF00665 Integrase core domain IBG34_18675 PF13592 Winged helix-turn helix IBG34_18675 PF13358 DDE superfamily endonuclease IBG34_18705 PF00072 Response regulator receiver domain IBG34_18705 PF00486 Transcriptional regulatory protein, C terminal IBG34_18710 PF00672 HAMP domain IBG34_18710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_18710 PF00512 His Kinase A (phospho-acceptor) domain IBG34_18715 PF13808 DDE_Tnp_1-associated IBG34_18715 PF01609 Transposase DDE domain IBG34_18730 PF00665 Integrase core domain IBG34_18735 PF01695 IstB-like ATP binding protein IBG34_18765 PF13592 Winged helix-turn helix IBG34_18765 PF13358 DDE superfamily endonuclease IBG34_18775 PF00394 Multicopper oxidase IBG34_18775 PF07731 Multicopper oxidase IBG34_18775 PF07732 Multicopper oxidase IBG34_18785 PF13358 DDE superfamily endonuclease IBG34_18785 PF13592 Winged helix-turn helix IBG34_18790 PF01609 Transposase DDE domain IBG34_18790 PF05598 Transposase domain (DUF772) IBG34_18800 PF02441 Flavoprotein IBG34_18800 PF04127 DNA / pantothenate metabolism flavoprotein IBG34_18805 PF04002 RadC-like JAB domain IBG34_18810 PF00830 Ribosomal L28 family IBG34_18815 PF00471 Ribosomal protein L33 IBG34_18830 PF04393 Protein of unknown function (DUF535) IBG34_18835 PF01467 Cytidylyltransferase-like IBG34_18840 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IBG34_18845 PF00535 Glycosyl transferase family 2 IBG34_18850 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IBG34_18855 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IBG34_18865 PF07804 HipA-like C-terminal domain IBG34_18885 PF01609 Transposase DDE domain IBG34_18885 PF13808 DDE_Tnp_1-associated IBG34_18895 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) IBG34_18905 PF09344 CT1975-like protein IBG34_18925 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) IBG34_18930 PF13358 DDE superfamily endonuclease IBG34_18930 PF13592 Winged helix-turn helix IBG34_18965 PF03755 YicC-like family, N-terminal region IBG34_18965 PF08340 Domain of unknown function (DUF1732) IBG34_18970 PF01138 3' exoribonuclease family, domain 1 IBG34_18970 PF03725 3' exoribonuclease family, domain 2 IBG34_18975 PF00156 Phosphoribosyl transferase domain IBG34_18980 PF00403 Heavy-metal-associated domain IBG34_18985 PF00376 MerR family regulatory protein IBG34_18985 PF09278 MerR, DNA binding IBG34_18990 PF00563 EAL domain IBG34_18990 PF01590 GAF domain IBG34_18990 PF00990 Diguanylate cyclase, GGDEF domain IBG34_18990 PF00360 Phytochrome region IBG34_18995 PF06288 Protein of unknown function (DUF1040) IBG34_19000 PF13746 4Fe-4S dicluster domain IBG34_19000 PF12801 4Fe-4S binding domain IBG34_19000 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase IBG34_19005 PF01636 Phosphotransferase enzyme family IBG34_19010 PF01323 DSBA-like thioredoxin domain IBG34_19015 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IBG34_19015 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IBG34_19020 PF00857 Isochorismatase family IBG34_19030 PF04463 Protein of unknown function (DUF523) IBG34_19035 PF01553 Acyltransferase IBG34_19040 PF01553 Acyltransferase IBG34_19045 PF01078 Magnesium chelatase, subunit ChlI IBG34_19045 PF13335 Magnesium chelatase, subunit ChlI C-terminal IBG34_19060 PF01063 Amino-transferase class IV IBG34_19070 PF00291 Pyridoxal-phosphate dependent enzyme IBG34_19070 PF00585 C-terminal regulatory domain of Threonine dehydratase IBG34_19075 PF00691 OmpA family IBG34_19075 PF01389 OmpA-like transmembrane domain IBG34_19080 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IBG34_19080 PF18074 Primosomal protein N C-terminal domain IBG34_19080 PF17764 3′ DNA-binding domain (3′BD) IBG34_19080 PF00271 Helicase conserved C-terminal domain IBG34_19080 PF00270 DEAD/DEAH box helicase IBG34_19085 PF01197 Ribosomal protein L31 IBG34_19095 PF00390 Malic enzyme, N-terminal domain IBG34_19095 PF03949 Malic enzyme, NAD binding domain IBG34_19105 PF00512 His Kinase A (phospho-acceptor) domain IBG34_19105 PF00672 HAMP domain IBG34_19105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_19110 PF00486 Transcriptional regulatory protein, C terminal IBG34_19110 PF00072 Response regulator receiver domain IBG34_19115 PF05958 tRNA (Uracil-5-)-methyltransferase IBG34_19145 PF00012 Hsp70 protein IBG34_19150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IBG34_19150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IBG34_19155 PF05981 CreA protein IBG34_19170 PF01258 Prokaryotic dksA/traR C4-type zinc finger IBG34_19175 PF00120 Glutamine synthetase, catalytic domain IBG34_19180 PF00202 Aminotransferase class-III IBG34_19185 PF13416 Bacterial extracellular solute-binding protein IBG34_19190 PF13416 Bacterial extracellular solute-binding protein IBG34_19195 PF00005 ABC transporter IBG34_19195 PF08402 TOBE domain IBG34_19200 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_19205 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_19210 PF03475 3-alpha domain IBG34_19210 PF03473 MOSC domain IBG34_19225 PF03061 Thioesterase superfamily IBG34_19235 PF00034 Cytochrome c IBG34_19240 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IBG34_19250 PF02592 Putative vitamin uptake transporter IBG34_19255 PF03737 Aldolase/RraA IBG34_19260 PF03448 MgtE intracellular N domain IBG34_19260 PF01769 Divalent cation transporter IBG34_19260 PF00571 CBS domain IBG34_19270 PF01226 Formate/nitrite transporter IBG34_19275 PF13806 Rieske-like [2Fe-2S] domain IBG34_19280 PF04324 BFD-like [2Fe-2S] binding domain IBG34_19280 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IBG34_19280 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IBG34_19280 PF07992 Pyridine nucleotide-disulphide oxidoreductase IBG34_19280 PF18267 Rubredoxin NAD+ reductase C-terminal domain IBG34_19295 PF00005 ABC transporter IBG34_19300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IBG34_19310 PF03466 LysR substrate binding domain IBG34_19310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_19315 PF07690 Major Facilitator Superfamily IBG34_19320 PF07724 AAA domain (Cdc48 subfamily) IBG34_19320 PF00004 ATPase family associated with various cellular activities (AAA) IBG34_19320 PF10431 C-terminal, D2-small domain, of ClpB protein IBG34_19325 PF00227 Proteasome subunit IBG34_19335 PF03485 Arginyl tRNA synthetase N terminal domain IBG34_19335 PF05746 DALR anticodon binding domain IBG34_19335 PF00750 tRNA synthetases class I (R) IBG34_19345 PF04542 Sigma-70 region 2 IBG34_19345 PF04545 Sigma-70, region 4 IBG34_19355 PF02673 Bacitracin resistance protein BacA IBG34_19365 PF01263 Aldose 1-epimerase IBG34_19370 PF10509 Galactokinase galactose-binding signature IBG34_19370 PF08544 GHMP kinases C terminal IBG34_19370 PF00288 GHMP kinases N terminal domain IBG34_19375 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain IBG34_19375 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain IBG34_19385 PF00356 Bacterial regulatory proteins, lacI family IBG34_19395 PF13407 Periplasmic binding protein domain IBG34_19405 PF02653 Branched-chain amino acid transport system / permease component IBG34_19410 PF02743 Cache domain IBG34_19410 PF00672 HAMP domain IBG34_19410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_19430 PF00696 Amino acid kinase family IBG34_19435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IBG34_19435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IBG34_19440 PF03606 C4-dicarboxylate anaerobic carrier IBG34_19445 PF01316 Arginine repressor, DNA binding domain IBG34_19445 PF02863 Arginine repressor, C-terminal domain IBG34_19450 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain IBG34_19450 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain IBG34_19455 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IBG34_19455 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IBG34_19485 PF00465 Iron-containing alcohol dehydrogenase IBG34_19495 PF02233 NAD(P) transhydrogenase beta subunit IBG34_19500 PF03313 Serine dehydratase alpha chain IBG34_19505 PF00375 Sodium:dicarboxylate symporter family IBG34_19510 PF07992 Pyridine nucleotide-disulphide oxidoreductase IBG34_19510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IBG34_19515 PF13525 Outer membrane lipoprotein IBG34_19520 PF01479 S4 domain IBG34_19520 PF00849 RNA pseudouridylate synthase IBG34_19525 PF02578 Multi-copper polyphenol oxidoreductase laccase IBG34_19530 PF00004 ATPase family associated with various cellular activities (AAA) IBG34_19530 PF07724 AAA domain (Cdc48 subfamily) IBG34_19530 PF17871 AAA lid domain IBG34_19530 PF02861 Clp amino terminal domain, pathogenicity island component IBG34_19530 PF10431 C-terminal, D2-small domain, of ClpB protein IBG34_19540 PF00034 Cytochrome c IBG34_19550 PF03590 Aspartate-ammonia ligase IBG34_19555 PF01037 Lrp/AsnC ligand binding domain IBG34_19565 PF10063 Uncharacterized integral membrane protein (DUF2301) IBG34_19570 PF00571 CBS domain IBG34_19570 PF00478 IMP dehydrogenase / GMP reductase domain IBG34_19590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_19590 PF00512 His Kinase A (phospho-acceptor) domain IBG34_19600 PF00072 Response regulator receiver domain IBG34_19600 PF00158 Sigma-54 interaction domain IBG34_19605 PF06496 Protein of unknown function (DUF1097) IBG34_19610 PF00174 Oxidoreductase molybdopterin binding domain IBG34_19630 PF00072 Response regulator receiver domain IBG34_19630 PF00486 Transcriptional regulatory protein, C terminal IBG34_19650 PF03264 NapC/NirT cytochrome c family, N-terminal region IBG34_19660 PF02386 Cation transport protein IBG34_19665 PF02080 TrkA-C domain IBG34_19665 PF02254 TrkA-N domain IBG34_19670 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IBG34_19670 PF01565 FAD binding domain IBG34_19675 PF08279 HTH domain IBG34_19675 PF02237 Biotin protein ligase C terminal domain IBG34_19675 PF03099 Biotin/lipoate A/B protein ligase family IBG34_19680 PF00485 Phosphoribulokinase / Uridine kinase family IBG34_19695 PF00009 Elongation factor Tu GTP binding domain IBG34_19695 PF03144 Elongation factor Tu domain 2 IBG34_19695 PF03143 Elongation factor Tu C-terminal domain IBG34_19705 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IBG34_19710 PF00467 KOW motif IBG34_19710 PF02357 Transcription termination factor nusG IBG34_19715 PF03946 Ribosomal protein L11, N-terminal domain IBG34_19715 PF00298 Ribosomal protein L11, RNA binding domain IBG34_19720 PF00687 Ribosomal protein L1p/L10e family IBG34_19725 PF00466 Ribosomal protein L10 IBG34_19730 PF00542 Ribosomal protein L7/L12 C-terminal domain IBG34_19730 PF16320 Ribosomal protein L7/L12 dimerisation domain IBG34_19735 PF04565 RNA polymerase Rpb2, domain 3 IBG34_19735 PF04561 RNA polymerase Rpb2, domain 2 IBG34_19735 PF10385 RNA polymerase beta subunit external 1 domain IBG34_19735 PF04563 RNA polymerase beta subunit IBG34_19735 PF00562 RNA polymerase Rpb2, domain 6 IBG34_19735 PF04560 RNA polymerase Rpb2, domain 7 IBG34_19740 PF05000 RNA polymerase Rpb1, domain 4 IBG34_19740 PF00623 RNA polymerase Rpb1, domain 2 IBG34_19740 PF04997 RNA polymerase Rpb1, domain 1 IBG34_19740 PF04983 RNA polymerase Rpb1, domain 3 IBG34_19740 PF04998 RNA polymerase Rpb1, domain 5 IBG34_19745 PF08348 YheO-like PAS domain IBG34_19745 PF13309 HTH domain IBG34_19750 PF01042 Endoribonuclease L-PSP IBG34_19755 PF02635 DsrE/DsrF-like family IBG34_19760 PF02635 DsrE/DsrF-like family IBG34_19765 PF04077 DsrH like protein IBG34_19770 PF00164 Ribosomal protein S12/S23 IBG34_19775 PF00177 Ribosomal protein S7p/S5e IBG34_19780 PF03764 Elongation factor G, domain IV IBG34_19780 PF00679 Elongation factor G C-terminus IBG34_19780 PF14492 Elongation Factor G, domain II IBG34_19780 PF00009 Elongation factor Tu GTP binding domain IBG34_19780 PF03144 Elongation factor Tu domain 2 IBG34_19785 PF03143 Elongation factor Tu C-terminal domain IBG34_19785 PF03144 Elongation factor Tu domain 2 IBG34_19785 PF00009 Elongation factor Tu GTP binding domain IBG34_19830 PF02321 Outer membrane efflux protein IBG34_19845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IBG34_19845 PF00529 HlyD membrane-fusion protein of T1SS IBG34_19865 PF02600 Disulfide bond formation protein DsbB IBG34_19875 PF00403 Heavy-metal-associated domain IBG34_19880 PF13411 MerR HTH family regulatory protein IBG34_19885 PF05598 Transposase domain (DUF772) IBG34_19885 PF01609 Transposase DDE domain IBG34_19890 PF03079 ARD/ARD' family IBG34_19895 PF00860 Permease family IBG34_19900 PF02733 Dak1 domain IBG34_19905 PF02734 DAK2 domain IBG34_19910 PF03610 PTS system fructose IIA component IBG34_19910 PF00381 PTS HPr component phosphorylation site IBG34_19910 PF05524 PEP-utilising enzyme, N-terminal IBG34_19910 PF00391 PEP-utilising enzyme, mobile domain IBG34_19915 PF00989 PAS fold IBG34_19915 PF02954 Bacterial regulatory protein, Fis family IBG34_19915 PF00158 Sigma-54 interaction domain IBG34_19925 PF04371 Porphyromonas-type peptidyl-arginine deiminase IBG34_19930 PF13416 Bacterial extracellular solute-binding protein IBG34_19945 PF01594 AI-2E family transporter IBG34_19970 PF00199 Catalase IBG34_19970 PF06628 Catalase-related immune-responsive IBG34_19975 PF00583 Acetyltransferase (GNAT) family IBG34_19980 PF06719 AraC-type transcriptional regulator N-terminus IBG34_19980 PF12833 Helix-turn-helix domain IBG34_20000 PF00990 Diguanylate cyclase, GGDEF domain IBG34_20010 PF08402 TOBE domain IBG34_20010 PF00005 ABC transporter IBG34_20020 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_20035 PF00392 Bacterial regulatory proteins, gntR family IBG34_20035 PF07702 UTRA domain IBG34_20045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_20045 PF03466 LysR substrate binding domain IBG34_20055 PF02678 Pirin IBG34_20055 PF17954 Quercetinase C-terminal cupin domain IBG34_20060 PF07681 DoxX IBG34_20070 PF13361 UvrD-like helicase C-terminal domain IBG34_20070 PF12705 PD-(D/E)XK nuclease superfamily IBG34_20070 PF00580 UvrD/REP helicase N-terminal domain IBG34_20085 PF01609 Transposase DDE domain IBG34_20090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IBG34_20100 PF00909 Ammonium Transporter Family IBG34_20105 PF00543 Nitrogen regulatory protein P-II IBG34_20110 PF00990 Diguanylate cyclase, GGDEF domain IBG34_20110 PF08448 PAS fold IBG34_20125 PF00196 Bacterial regulatory proteins, luxR family IBG34_20130 PF00436 Single-strand binding protein family IBG34_20145 PF00313 'Cold-shock' DNA-binding domain IBG34_20160 PF00486 Transcriptional regulatory protein, C terminal IBG34_20160 PF00072 Response regulator receiver domain IBG34_20170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_20170 PF00672 HAMP domain IBG34_20180 PF07719 Tetratricopeptide repeat IBG34_20180 PF07219 HemY protein N-terminus IBG34_20185 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase IBG34_20190 PF02602 Uroporphyrinogen-III synthase HemD IBG34_20195 PF03900 Porphobilinogen deaminase, C-terminal domain IBG34_20195 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IBG34_20200 PF12633 Adenylate cyclase NT domain IBG34_20200 PF01295 Adenylate cyclase, class-I IBG34_20205 PF02230 Phospholipase/Carboxylesterase IBG34_20210 PF01491 Frataxin-like domain IBG34_20220 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IBG34_20220 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IBG34_20225 PF01678 Diaminopimelate epimerase IBG34_20235 PF02899 Phage integrase, N-terminal SAM-like domain IBG34_20235 PF00589 Phage integrase family IBG34_20250 PF07722 Peptidase C26 IBG34_20265 PF04307 LexA-binding, inner membrane-associated putative hydrolase IBG34_20280 PF04204 Homoserine O-succinyltransferase IBG34_20290 PF01037 Lrp/AsnC ligand binding domain IBG34_20295 PF00884 Sulfatase IBG34_20305 PF16657 Maltogenic Amylase, C-terminal domain IBG34_20305 PF00128 Alpha amylase, catalytic domain IBG34_20305 PF02903 Alpha amylase, N-terminal ig-like domain IBG34_20310 PF02308 MgtC family IBG34_20330 PF00106 short chain dehydrogenase IBG34_20345 PF00465 Iron-containing alcohol dehydrogenase IBG34_20355 PF01053 Cys/Met metabolism PLP-dependent enzyme IBG34_20385 PF00561 alpha/beta hydrolase fold IBG34_20395 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IBG34_20395 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IBG34_20400 PF02698 DUF218 domain IBG34_20415 PF00378 Enoyl-CoA hydratase/isomerase IBG34_20420 PF12697 Alpha/beta hydrolase family IBG34_20425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IBG34_20425 PF16582 Middle domain of thiamine pyrophosphate IBG34_20425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IBG34_20440 PF02554 Carbon starvation protein CstA IBG34_20440 PF13722 5TM C-terminal transporter carbon starvation CstA IBG34_20445 PF04328 Selenoprotein, putative IBG34_20450 PF07683 Cobalamin synthesis protein cobW C-terminal domain IBG34_20450 PF02492 CobW/HypB/UreG, nucleotide-binding domain IBG34_20475 PF03880 DbpA RNA binding domain IBG34_20475 PF00270 DEAD/DEAH box helicase IBG34_20475 PF00271 Helicase conserved C-terminal domain IBG34_20485 PF01773 Na+ dependent nucleoside transporter N-terminus IBG34_20485 PF07662 Na+ dependent nucleoside transporter C-terminus IBG34_20485 PF07670 Nucleoside recognition IBG34_20490 PF02368 Bacterial Ig-like domain (group 2) IBG34_20490 PF11999 Protein of unknown function (DUF3494) IBG34_20495 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IBG34_20500 PF01544 CorA-like Mg2+ transporter protein IBG34_20520 PF05068 Mannitol repressor IBG34_20525 PF01232 Mannitol dehydrogenase Rossmann domain IBG34_20525 PF08125 Mannitol dehydrogenase C-terminal domain IBG34_20530 PF02378 Phosphotransferase system, EIIC IBG34_20530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IBG34_20530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IBG34_20535 PF08206 Ribonuclease B OB domain IBG34_20535 PF00773 RNB domain IBG34_20535 PF17876 Cold shock domain IBG34_20540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_20540 PF03466 LysR substrate binding domain IBG34_20545 PF00765 Autoinducer synthase IBG34_20550 PF00196 Bacterial regulatory proteins, luxR family IBG34_20550 PF03472 Autoinducer binding domain IBG34_20555 PF01810 LysE type translocator IBG34_20560 PF02872 5'-nucleotidase, C-terminal domain IBG34_20560 PF00149 Calcineurin-like phosphoesterase IBG34_20565 PF03279 Bacterial lipid A biosynthesis acyltransferase IBG34_20575 PF02321 Outer membrane efflux protein IBG34_20580 PF00293 NUDIX domain IBG34_20585 PF06853 Protein of unknown function (DUF1249) IBG34_20590 PF00149 Calcineurin-like phosphoesterase IBG34_20595 PF05728 Uncharacterised protein family (UPF0227) IBG34_20600 PF00293 NUDIX domain IBG34_20615 PF00529 HlyD membrane-fusion protein of T1SS IBG34_20615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IBG34_20620 PF04632 Fusaric acid resistance protein family IBG34_20625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBG34_20625 PF00986 DNA gyrase B subunit, carboxyl terminus IBG34_20625 PF00204 DNA gyrase B IBG34_20625 PF01751 Toprim domain IBG34_20630 PF03989 DNA gyrase C-terminal domain, beta-propeller IBG34_20630 PF00521 DNA gyrase/topoisomerase IV, subunit A IBG34_20650 PF00583 Acetyltransferase (GNAT) family IBG34_20685 PF00226 DnaJ domain IBG34_20685 PF00684 DnaJ central domain IBG34_20685 PF01556 DnaJ C terminal domain IBG34_20695 PF00578 AhpC/TSA family IBG34_20715 PF01553 Acyltransferase IBG34_20720 PF04012 PspA/IM30 family IBG34_20735 PF01541 GIY-YIG catalytic domain IBG34_20740 PF00892 EamA-like transporter family IBG34_20745 PF03167 Uracil DNA glycosylase superfamily IBG34_20760 PF00950 ABC 3 transport family IBG34_20765 PF00005 ABC transporter IBG34_20770 PF01297 Zinc-uptake complex component A periplasmic IBG34_20790 PF01551 Peptidase family M23 IBG34_20790 PF08525 Opacity-associated protein A N-terminal motif IBG34_20790 PF01476 LysM domain IBG34_20795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IBG34_20800 PF04222 Protein of unknown function (DUF416) IBG34_20815 PF02028 BCCT, betaine/carnitine/choline family transporter IBG34_20820 PF05192 MutS domain III IBG34_20820 PF01624 MutS domain I IBG34_20820 PF05190 MutS family domain IV IBG34_20820 PF00488 MutS domain V IBG34_20820 PF05188 MutS domain II IBG34_20835 PF00154 recA bacterial DNA recombination protein IBG34_20840 PF02631 RecX family IBG34_20845 PF02272 DHHA1 domain IBG34_20845 PF01411 tRNA synthetases class II (A) IBG34_20845 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IBG34_20850 PF13840 ACT domain IBG34_20850 PF00696 Amino acid kinase family IBG34_20850 PF01842 ACT domain IBG34_20855 PF02599 Global regulator protein family IBG34_20890 PF00768 D-alanyl-D-alanine carboxypeptidase IBG34_20895 PF09335 SNARE associated Golgi protein IBG34_20900 PF00571 CBS domain IBG34_20900 PF03471 Transporter associated domain IBG34_20900 PF01595 Cyclin M transmembrane N-terminal domain IBG34_20905 PF00133 tRNA synthetases class I (I, L, M and V) IBG34_20905 PF10458 Valyl tRNA synthetase tRNA binding arm IBG34_20905 PF08264 Anticodon-binding domain of tRNA IBG34_20910 PF04364 DNA polymerase III chi subunit, HolC IBG34_20915 PF00883 Cytosol aminopeptidase family, catalytic domain IBG34_20915 PF02789 Cytosol aminopeptidase family, N-terminal domain IBG34_20920 PF03739 Lipopolysaccharide export system permease LptF/LptG IBG34_20925 PF03739 Lipopolysaccharide export system permease LptF/LptG IBG34_20940 PF00589 Phage integrase family IBG34_20955 PF00665 Integrase core domain IBG34_20960 PF01695 IstB-like ATP binding protein IBG34_20975 PF01926 50S ribosome-binding GTPase IBG34_20975 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IBG34_21015 PF02796 Helix-turn-helix domain of resolvase IBG34_21015 PF00239 Resolvase, N terminal domain IBG34_21025 PF04851 Type III restriction enzyme, res subunit IBG34_21025 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IBG34_21025 PF00271 Helicase conserved C-terminal domain IBG34_21025 PF08463 EcoEI R protein C-terminal IBG34_21030 PF01420 Type I restriction modification DNA specificity domain IBG34_21040 PF12161 HsdM N-terminal domain IBG34_21040 PF02384 N-6 DNA Methylase IBG34_21055 PF00909 Ammonium Transporter Family IBG34_21060 PF01938 TRAM domain IBG34_21060 PF05958 tRNA (Uracil-5-)-methyltransferase IBG34_21080 PF01026 TatD related DNase IBG34_21085 PF07670 Nucleoside recognition IBG34_21085 PF01773 Na+ dependent nucleoside transporter N-terminus IBG34_21085 PF07662 Na+ dependent nucleoside transporter C-terminus IBG34_21095 PF01791 DeoC/LacD family aldolase IBG34_21100 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain IBG34_21100 PF02885 Glycosyl transferase family, helical bundle domain IBG34_21100 PF00591 Glycosyl transferase family, a/b domain IBG34_21105 PF01676 Metalloenzyme superfamily IBG34_21110 PF01048 Phosphorylase superfamily IBG34_21120 PF11737 Protein of unknown function (DUF3300) IBG34_21130 PF18429 Domain of unknown function (DUF5609) IBG34_21145 PF18073 Rubredoxin metal binding domain IBG34_21150 PF07238 PilZ domain IBG34_21155 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ IBG34_21160 PF00216 Bacterial DNA-binding protein IBG34_21175 PF01207 Dihydrouridine synthase (Dus) IBG34_21180 PF01475 Ferric uptake regulator family IBG34_21195 PF05525 Branched-chain amino acid transport protein IBG34_21205 PF00271 Helicase conserved C-terminal domain IBG34_21205 PF00270 DEAD/DEAH box helicase IBG34_21210 PF03883 Peroxide stress protein YaaA IBG34_21220 PF00437 Type II/IV secretion system protein IBG34_21225 PF01168 Alanine racemase, N-terminal domain IBG34_21230 PF03807 NADP oxidoreductase coenzyme F420-dependent IBG34_21230 PF14748 Pyrroline-5-carboxylate reductase dimerisation IBG34_21235 PF02325 YGGT family IBG34_21240 PF02594 Uncharacterised ACR, YggU family COG1872 IBG34_21260 PF06062 Uncharacterised protein family (UPF0231) IBG34_21270 PF05651 Putative sugar diacid recognition IBG34_21270 PF17853 GGDEF-like domain IBG34_21270 PF13556 PucR C-terminal helix-turn-helix domain IBG34_21275 PF02447 GntP family permease IBG34_21280 PF02595 Glycerate kinase family IBG34_21290 PF00255 Glutathione peroxidase IBG34_21295 PF03466 LysR substrate binding domain IBG34_21295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_21300 PF07670 Nucleoside recognition IBG34_21300 PF01773 Na+ dependent nucleoside transporter N-terminus IBG34_21300 PF07662 Na+ dependent nucleoside transporter C-terminus IBG34_21305 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IBG34_21305 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IBG34_21310 PF00472 RF-1 domain IBG34_21315 PF00543 Nitrogen regulatory protein P-II IBG34_21330 PF00005 ABC transporter IBG34_21330 PF08402 TOBE domain IBG34_21335 PF04261 Dyp-type peroxidase family IBG34_21340 PF02863 Arginine repressor, C-terminal domain IBG34_21340 PF01316 Arginine repressor, DNA binding domain IBG34_21345 PF00005 ABC transporter IBG34_21350 PF00497 Bacterial extracellular solute-binding proteins, family 3 IBG34_21355 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_21360 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_21365 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IBG34_21365 PF00056 lactate/malate dehydrogenase, NAD binding domain IBG34_21370 PF08238 Sel1 repeat IBG34_21375 PF00970 Oxidoreductase FAD-binding domain IBG34_21375 PF00175 Oxidoreductase NAD-binding domain IBG34_21375 PF00042 Globin IBG34_21380 PF02082 Transcriptional regulator IBG34_21390 PF01578 Cytochrome C assembly protein IBG34_21395 PF02881 SRP54-type protein, helical bundle domain IBG34_21395 PF02978 Signal peptide binding domain IBG34_21395 PF00448 SRP54-type protein, GTPase domain IBG34_21400 PF00886 Ribosomal protein S16 IBG34_21405 PF05239 PRC-barrel domain IBG34_21405 PF01782 RimM N-terminal domain IBG34_21410 PF01746 tRNA (Guanine-1)-methyltransferase IBG34_21415 PF01245 Ribosomal protein L19 IBG34_21425 PF02976 DNA mismatch repair enzyme MutH IBG34_21440 PF01790 Prolipoprotein diacylglyceryl transferase IBG34_21445 PF00303 Thymidylate synthase IBG34_21450 PF06965 Na+/H+ antiporter 1 IBG34_21460 PF03466 LysR substrate binding domain IBG34_21460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_21465 PF01022 Bacterial regulatory protein, arsR family IBG34_21470 PF01649 Ribosomal protein S20 IBG34_21475 PF03023 Lipid II flippase MurJ IBG34_21480 PF06574 FAD synthetase IBG34_21480 PF01687 Riboflavin kinase IBG34_21485 PF08264 Anticodon-binding domain of tRNA IBG34_21485 PF06827 Zinc finger found in FPG and IleRS IBG34_21485 PF00133 tRNA synthetases class I (I, L, M and V) IBG34_21490 PF01252 Signal peptidase (SPase) II IBG34_21495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IBG34_21500 PF02401 LytB protein IBG34_21505 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor IBG34_21505 PF07963 Prokaryotic N-terminal methylation motif IBG34_21530 PF01609 Transposase DDE domain IBG34_21530 PF13808 DDE_Tnp_1-associated IBG34_21550 PF00795 Carbon-nitrogen hydrolase IBG34_21550 PF02540 NAD synthase IBG34_21555 PF00543 Nitrogen regulatory protein P-II IBG34_21565 PF02664 S-Ribosylhomocysteinase (LuxS) IBG34_21570 PF00990 Diguanylate cyclase, GGDEF domain IBG34_21575 PF00575 S1 RNA binding domain IBG34_21575 PF17876 Cold shock domain IBG34_21575 PF08206 Ribonuclease B OB domain IBG34_21575 PF08461 Ribonuclease R winged-helix domain IBG34_21575 PF00773 RNB domain IBG34_21580 PF00588 SpoU rRNA Methylase family IBG34_21580 PF08032 RNA 2'-O ribose methyltransferase substrate binding IBG34_21590 PF13673 Acetyltransferase (GNAT) domain IBG34_21605 PF01566 Natural resistance-associated macrophage protein IBG34_21610 PF01250 Ribosomal protein S6 IBG34_21615 PF01084 Ribosomal protein S18 IBG34_21620 PF03948 Ribosomal protein L9, C-terminal domain IBG34_21620 PF01281 Ribosomal protein L9, N-terminal domain IBG34_21625 PF00970 Oxidoreductase FAD-binding domain IBG34_21625 PF00175 Oxidoreductase NAD-binding domain IBG34_21660 PF09335 SNARE associated Golgi protein IBG34_21665 PF00675 Insulinase (Peptidase family M16) IBG34_21665 PF05193 Peptidase M16 inactive domain IBG34_21670 PF04262 Glutamate-cysteine ligase IBG34_21675 PF03605 Anaerobic c4-dicarboxylate membrane transporter IBG34_21680 PF10415 Fumarase C C-terminus IBG34_21680 PF00206 Lyase IBG34_21685 PF04186 FxsA cytoplasmic membrane protein IBG34_21690 PF01554 MatE IBG34_21695 PF00166 Chaperonin 10 Kd subunit IBG34_21700 PF00118 TCP-1/cpn60 chaperonin family IBG34_21710 PF00990 Diguanylate cyclase, GGDEF domain IBG34_21710 PF03707 Bacterial signalling protein N terminal repeat IBG34_21710 PF00563 EAL domain IBG34_21720 PF00849 RNA pseudouridylate synthase IBG34_21725 PF12137 RNA polymerase recycling family C-terminal IBG34_21725 PF00176 SNF2 family N-terminal domain IBG34_21725 PF18339 RapA N-terminal Tudor like domain 1 IBG34_21725 PF18337 RapA N-terminal Tudor like domain IBG34_21725 PF00271 Helicase conserved C-terminal domain IBG34_21770 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_21775 PF00528 Binding-protein-dependent transport system inner membrane component IBG34_21780 PF00005 ABC transporter IBG34_21780 PF12857 TOBE-like domain IBG34_21785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_21785 PF03466 LysR substrate binding domain IBG34_21795 PF00672 HAMP domain IBG34_21795 PF17200 Single Cache domain 2 IBG34_21795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_21825 PF04055 Radical SAM superfamily IBG34_21840 PF00155 Aminotransferase class I and II IBG34_21855 PF06564 Cellulose biosynthesis protein BcsQ IBG34_21865 PF03170 Bacterial cellulose synthase subunit IBG34_21870 PF01270 Glycosyl hydrolases family 8 IBG34_21875 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) IBG34_21880 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) IBG34_21885 PF02583 Metal-sensitive transcriptional repressor IBG34_21900 PF11852 Domain of unknown function (DUF3372) IBG34_21900 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IBG34_21900 PF03714 Bacterial pullanase-associated domain IBG34_21900 PF17967 Pullulanase N2 domain IBG34_21900 PF18494 Pullulanase Ins domain IBG34_21910 PF08534 Redoxin IBG34_21915 PF00270 DEAD/DEAH box helicase IBG34_21915 PF00271 Helicase conserved C-terminal domain IBG34_21925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_21925 PF08447 PAS fold IBG34_21935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IBG34_21945 PF00132 Bacterial transferase hexapeptide (six repeats) IBG34_21950 PF10952 Protein of unknown function (DUF2753) IBG34_21955 PF00378 Enoyl-CoA hydratase/isomerase IBG34_21970 PF00106 short chain dehydrogenase IBG34_21975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IBG34_21975 PF04073 Aminoacyl-tRNA editing domain IBG34_21975 PF03129 Anticodon binding domain IBG34_21980 PF00672 HAMP domain IBG34_21980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_21985 PF07499 RuvA, C-terminal domain IBG34_21985 PF01330 RuvA N terminal domain IBG34_21990 PF17864 RuvB AAA lid domain IBG34_21990 PF05496 Holliday junction DNA helicase RuvB P-loop domain IBG34_21990 PF05491 RuvB C-terminal winged helix domain IBG34_21995 PF01654 Cytochrome bd terminal oxidase subunit I IBG34_22000 PF02322 Cytochrome bd terminal oxidase subunit II IBG34_22005 PF08173 Membrane bound YbgT-like protein IBG34_22010 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) IBG34_22015 PF03061 Thioesterase superfamily IBG34_22020 PF01618 MotA/TolQ/ExbB proton channel family IBG34_22025 PF02472 Biopolymer transport protein ExbD/TolR IBG34_22035 PF07676 WD40-like Beta Propeller Repeat IBG34_22035 PF04052 TolB amino-terminal domain IBG34_22040 PF00691 OmpA family IBG34_22045 PF13174 Tetratricopeptide repeat IBG34_22045 PF16331 TolA binding protein trimerisation IBG34_22120 PF02445 Quinolinate synthetase A protein IBG34_22125 PF01263 Aldose 1-epimerase IBG34_22130 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IBG34_22130 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IBG34_22135 PF02446 4-alpha-glucanotransferase IBG34_22140 PF00128 Alpha amylase, catalytic domain IBG34_22140 PF02806 Alpha amylase, C-terminal all-beta domain IBG34_22140 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IBG34_22145 PF00128 Alpha amylase, catalytic domain IBG34_22145 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IBG34_22150 PF01641 SelR domain IBG34_22160 PF00293 NUDIX domain IBG34_22165 PF16884 N-terminal domain of oxidoreductase IBG34_22165 PF00107 Zinc-binding dehydrogenase IBG34_22170 PF01047 MarR family IBG34_22185 PF01037 Lrp/AsnC ligand binding domain IBG34_22195 PF07690 Major Facilitator Superfamily IBG34_22215 PF00209 Sodium:neurotransmitter symporter family IBG34_22220 PF00209 Sodium:neurotransmitter symporter family IBG34_22230 PF00155 Aminotransferase class I and II IBG34_22230 PF00392 Bacterial regulatory proteins, gntR family IBG34_22240 PF01810 LysE type translocator IBG34_22245 PF01177 Asp/Glu/Hydantoin racemase IBG34_22255 PF00501 AMP-binding enzyme IBG34_22265 PF00583 Acetyltransferase (GNAT) family IBG34_22280 PF05762 VWA domain containing CoxE-like protein IBG34_22290 PF00072 Response regulator receiver domain IBG34_22290 PF00990 Diguanylate cyclase, GGDEF domain IBG34_22295 PF00009 Elongation factor Tu GTP binding domain IBG34_22295 PF03144 Elongation factor Tu domain 2 IBG34_22295 PF16658 Class II release factor RF3, C-terminal domain IBG34_22305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IBG34_22310 PF13977 BetI-type transcriptional repressor, C-terminal IBG34_22310 PF00440 Bacterial regulatory proteins, tetR family IBG34_22320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_22320 PF03466 LysR substrate binding domain IBG34_22325 PF04371 Porphyromonas-type peptidyl-arginine deiminase IBG34_22330 PF01425 Amidase IBG34_22375 PF00270 DEAD/DEAH box helicase IBG34_22375 PF00271 Helicase conserved C-terminal domain IBG34_22385 PF05643 Putative bacterial lipoprotein (DUF799) IBG34_22395 PF03783 Curli production assembly/transport component CsgG IBG34_22415 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase IBG34_22435 PF00445 Ribonuclease T2 family IBG34_22445 PF03060 Nitronate monooxygenase IBG34_22500 PF01810 LysE type translocator IBG34_22505 PF02954 Bacterial regulatory protein, Fis family IBG34_22510 PF01207 Dihydrouridine synthase (Dus) IBG34_22520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IBG34_22555 PF00854 POT family IBG34_22560 PF00483 Nucleotidyl transferase IBG34_22575 PF03795 YCII-related domain IBG34_22580 PF04279 Intracellular septation protein A IBG34_22590 PF03006 Haemolysin-III related IBG34_22595 PF06826 Predicted Permease Membrane Region IBG34_22595 PF02080 TrkA-C domain IBG34_22640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IBG34_22640 PF03466 LysR substrate binding domain IBG34_22650 PF13302 Acetyltransferase (GNAT) domain IBG34_22655 PF13302 Acetyltransferase (GNAT) domain IBG34_22665 PF04074 YhcH/YjgK/YiaL IBG34_22670 PF00871 Acetokinase family IBG34_22675 PF00924 Mechanosensitive ion channel IBG34_22685 PF00474 Sodium:solute symporter family IBG34_22695 PF02525 Flavodoxin-like fold IBG34_22700 PF13411 MerR HTH family regulatory protein IBG34_22735 PF00005 ABC transporter IBG34_22735 PF12848 ABC transporter IBG34_22740 PF00571 CBS domain IBG34_22740 PF00478 IMP dehydrogenase / GMP reductase domain IBG34_22745 PF00267 Gram-negative porin IBG34_22750 PF01584 CheW-like domain IBG34_22750 PF00072 Response regulator receiver domain IBG34_22755 PF13472 GDSL-like Lipase/Acylhydrolase family IBG34_22770 PF08338 Domain of unknown function (DUF1731) IBG34_22770 PF01370 NAD dependent epimerase/dehydratase family IBG34_22775 PF00563 EAL domain IBG34_22775 PF12792 CSS motif domain associated with EAL IBG34_22785 PF01483 Proprotein convertase P-domain IBG34_22785 PF04389 Peptidase family M28 IBG34_22790 PF02390 Putative methyltransferase IBG34_22795 PF04320 Protein with unknown function (DUF469) IBG34_22800 PF04960 Glutaminase IBG34_22805 PF00581 Rhodanese-like domain IBG34_22810 PF06004 Bacterial protein of unknown function (DUF903) IBG34_22815 PF01810 LysE type translocator IBG34_22820 PF12833 Helix-turn-helix domain IBG34_22830 PF00561 alpha/beta hydrolase fold IBG34_22840 PF01609 Transposase DDE domain IBG34_22855 PF00589 Phage integrase family IBG34_22875 PF00563 EAL domain IBG34_22875 PF05231 MASE1 IBG34_22875 PF08447 PAS fold IBG34_22875 PF08448 PAS fold IBG34_22875 PF13426 PAS domain IBG34_22875 PF00990 Diguanylate cyclase, GGDEF domain IBG34_22880 PF00589 Phage integrase family IBG34_22880 PF02899 Phage integrase, N-terminal SAM-like domain IBG34_22885 PF01609 Transposase DDE domain IBG34_22885 PF13808 DDE_Tnp_1-associated IBG34_22915 PF01048 Phosphorylase superfamily IBG34_22930 PF06877 Regulator of ribonuclease activity B IBG34_22935 PF00563 EAL domain IBG34_22935 PF00990 Diguanylate cyclase, GGDEF domain IBG34_22935 PF03707 Bacterial signalling protein N terminal repeat IBG34_22945 PF13006 Insertion element 4 transposase N-terminal IBG34_22945 PF01609 Transposase DDE domain IBG34_22960 PF09905 DNA-binding protein VF530 IBG34_22965 PF02666 Phosphatidylserine decarboxylase IBG34_22970 PF03193 RsgA GTPase IBG34_22975 PF00929 Exonuclease IBG34_23015 PF00313 'Cold-shock' DNA-binding domain IBG34_23030 PF00672 HAMP domain IBG34_23030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IBG34_23035 PF00749 tRNA synthetases class I (E and Q), catalytic domain IBG34_23135 PF13614 AAA domain IBG34_23190 PF04002 RadC-like JAB domain IBG34_23225 PF18818 Metallopeptidase superfamily domain IBG34_23225 PF08401 Domain of unknown function (DUF1738) IBG34_23295 PF10412 Type IV secretion-system coupling protein DNA-binding domain IBG34_23295 PF12615 F sex factor protein N terminal IBG34_23300 PF18340 DNA relaxase TraI 2B/2B-like domain IBG34_23300 PF18272 single-stranded DNA binding TraI N-terminal subdomain IBG34_23300 PF07057 DNA helicase TraI IBG34_23300 PF08751 TrwC relaxase IBG34_23400 PF00589 Phage integrase family IBG34_23430 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system IBG34_23465 PF00376 MerR family regulatory protein IBG34_23465 PF09278 MerR, DNA binding IBG34_23470 PF02411 MerT mercuric transport protein IBG34_23480 PF00403 Heavy-metal-associated domain IBG34_23480 PF07992 Pyridine nucleotide-disulphide oxidoreductase IBG34_23480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IBG34_23485 PF13411 MerR HTH family regulatory protein IBG34_23490 PF05052 MerE protein IBG34_23495 PF00563 EAL domain IBG34_23495 PF00990 Diguanylate cyclase, GGDEF domain IBG34_23495 PF03707 Bacterial signalling protein N terminal repeat IBG34_23505 PF13610 DDE domain IBG34_23510 PF13610 DDE domain IBG34_23525 PF13427 Domain of unknown function (DUF4111) IBG34_23525 PF01909 Nucleotidyltransferase domain IBG34_23530 PF00893 Small Multidrug Resistance protein IBG34_23535 PF00809 Pterin binding enzyme IBG34_23550 PF13610 DDE domain IBG34_23560 PF00440 Bacterial regulatory proteins, tetR family IBG34_23560 PF02909 Tetracyclin repressor-like, C-terminal domain IBG34_23565 PF07690 Major Facilitator Superfamily IBG34_23580 PF00589 Phage integrase family IBG34_23585 PF13610 DDE domain IBG34_23595 PF02796 Helix-turn-helix domain of resolvase IBG34_23595 PF00239 Resolvase, N terminal domain IBG34_23605 PF01695 IstB-like ATP binding protein IBG34_23610 PF00665 Integrase core domain IBG34_23615 PF01381 Helix-turn-helix IBG34_23700 PF13614 AAA domain IBG34_23760 PF04002 RadC-like JAB domain