locus-tag	class	description
IBG34_00025	COG1278	Cold shock
IBG34_00090	COG0848	biopolymer transport protein
IBG34_00095	COG0811	peptide transport
IBG34_00100	COG0811	peptide transport
IBG34_00115	COG4174	ABC transporter (Permease)
IBG34_00120	COG4239	(ABC) transporter, permease
IBG34_00125	COG0747	negative chemotaxis
IBG34_00130	COG0444	Belongs to the ABC transporter superfamily
IBG34_00135	COG4608	Belongs to the ABC transporter superfamily
IBG34_00140	COG2195	Cleaves the N-terminal amino acid of tripeptides
IBG34_00145	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
IBG34_00150	COG1073	alpha beta
IBG34_00205	COG1116	anion transmembrane transporter activity
IBG34_00205	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
IBG34_00210	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
IBG34_00215	COG1116	anion transmembrane transporter activity
IBG34_00225	COG2146	nitrite reductase [NAD(P)H] activity
IBG34_00225	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
IBG34_00230	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IBG34_00235	COG2313	pseudouridylate synthase activity
IBG34_00255	COG5433	transposase activity
IBG34_00260	COG1858	cytochrome C peroxidase
IBG34_00275	COG0521	Mo-molybdopterin cofactor biosynthetic process
IBG34_00285	COG2966	Psort location CytoplasmicMembrane, score
IBG34_00290	COG3610	response to peptide
IBG34_00305	COG4176	ABC-type proline glycine betaine transport system permease component
IBG34_00320	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
IBG34_00335	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
IBG34_00350	COG0786	glutamate:sodium symporter activity
IBG34_00360	COG3139	Protein of unknown function (DUF1315)
IBG34_00385	COG0616	signal peptide processing
IBG34_00395	COG0778	Nitroreductase
IBG34_00405	COG2264	protein methyltransferase activity
IBG34_00410	COG0604	alcohol dehydrogenase
IBG34_00415	COG0583	DNA-binding transcription factor activity
IBG34_00425	COG4145	pantothenate transmembrane transporter activity
IBG34_00430	COG3924	membrane
IBG34_00435	COG0439	Biotin carboxylase
IBG34_00440	COG0511	ligase activity, forming carbon-carbon bonds
IBG34_00445	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
IBG34_00465	COG3381	protein complex oligomerization
IBG34_00475	COG3005	denitrification pathway
IBG34_00480	COG0745	RESPONSE REGULATOR receiver
IBG34_00500	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
IBG34_00505	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
IBG34_00510	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
IBG34_00510	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
IBG34_00525	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
IBG34_00530	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
IBG34_00535	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
IBG34_00540	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
IBG34_00545	COG4172	Belongs to the ABC transporter superfamily
IBG34_00555	COG0601	transmembrane transport
IBG34_00570	COG0142	geranyltranstransferase activity
IBG34_00575	COG1722	exodeoxyribonuclease VII activity
IBG34_00580	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
IBG34_00585	COG1360	Flagellar Motor Protein
IBG34_00590	COG2823	Periplasmic or secreted lipoprotein
IBG34_00600	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
IBG34_00620	COG3861	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
IBG34_00635	COG1534	Rna-binding protein
IBG34_00650	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
IBG34_00655	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IBG34_00660	COG0149	triose-phosphate isomerase activity
IBG34_00665	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
IBG34_00680	COG0779	Required for maturation of 30S ribosomal subunits
IBG34_00685	COG0195	Participates in both transcription termination and antitermination
IBG34_00690	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
IBG34_00695	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
IBG34_00700	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
IBG34_00705	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
IBG34_00710	COG1185	polyribonucleotide nucleotidyltransferase activity
IBG34_00720	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
IBG34_00730	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
IBG34_00735	COG0826	peptidase U32
IBG34_00750	COG0312	modulator of DNA gyrase
IBG34_00760	COG3385	transposase activity
IBG34_00775	COG4974	Belongs to the 'phage' integrase family
IBG34_00780	COG1970	mechanosensitive ion channel activity
IBG34_00795	COG0789	Transcriptional regulator
IBG34_00810	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
IBG34_00820	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
IBG34_00825	COG0321	lipoyl(octanoyl) transferase activity
IBG34_00830	COG2921	Belongs to the UPF0250 family
IBG34_00835	COG1686	Belongs to the peptidase S11 family
IBG34_00840	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
IBG34_00845	COG2951	lytic endotransglycosylase activity
IBG34_00860	COG0768	penicillin binding
IBG34_00865	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
IBG34_00870	COG0799	negative regulation of ribosome biogenesis
IBG34_00875	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
IBG34_00890	COG0495	leucyl-tRNA aminoacylation
IBG34_00900	COG0815	Transfers the fatty acyl group on membrane lipoproteins
IBG34_00905	COG4535	Mg2 and Co2 transporter CorC
IBG34_00910	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
IBG34_00915	COG1702	phosphate starvation-inducible protein PhoH
IBG34_00920	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
IBG34_00925	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IBG34_00940	COG0583	DNA-binding transcription factor activity
IBG34_00950	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IBG34_00970	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IBG34_00985	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
IBG34_00995	COG0516	GMP reductase activity
IBG34_01005	COG0642	Histidine kinase
IBG34_01020	COG0300	oxidoreductase activity
IBG34_01030	COG1022	Amp-dependent synthetase and ligase
IBG34_01040	COG4106	trans-aconitate 2-methyltransferase activity
IBG34_01050	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
IBG34_01055	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
IBG34_01060	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
IBG34_01065	COG1053	succinate dehydrogenase
IBG34_01085	COG3264	Mechanosensitive ion channel
IBG34_01085	COG1511	domain protein
IBG34_01090	COG0534	Mate efflux family protein
IBG34_01095	COG0739	heme binding
IBG34_01105	COG3121	Chaperone
IBG34_01130	COG0583	DNA-binding transcription factor activity
IBG34_01145	COG0583	DNA-binding transcription factor activity
IBG34_01150	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
IBG34_01180	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
IBG34_01185	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
IBG34_01195	COG0338	D12 class N6 adenine-specific DNA methyltransferase
IBG34_01200	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
IBG34_01205	COG0546	phosphoglycolate phosphatase activity
IBG34_01210	COG0180	Tryptophanyl-tRNA synthetase
IBG34_01225	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
IBG34_01235	COG1012	belongs to the aldehyde dehydrogenase family
IBG34_01245	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IBG34_01275	COG0657	acetylesterase activity
IBG34_01285	COG0471	metal ion transport
IBG34_01285	COG0490	domain, Protein
IBG34_01330	COG0012	GTP binding
IBG34_01340	COG0193	aminoacyl-tRNA hydrolase activity
IBG34_01345	COG0737	Belongs to the 5'-nucleotidase family
IBG34_01350	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
IBG34_01360	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
IBG34_01365	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
IBG34_01370	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
IBG34_01375	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
IBG34_01380	COG2890	protein-(glutamine-N5) methyltransferase activity
IBG34_01390	COG2912	Transglutaminase-like superfamily
IBG34_01410	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
IBG34_01425	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
IBG34_01430	COG1115	amino acid carrier protein
IBG34_01450	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
IBG34_01460	COG0189	ligase activity
IBG34_01465	COG1385	rRNA (uridine-N3-)-methyltransferase activity
IBG34_01475	COG3091	SprT-like family
IBG34_01485	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
IBG34_01515	COG0456	acetyltransferase
IBG34_01530	COG0739	heme binding
IBG34_01535	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
IBG34_01555	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
IBG34_01560	COG0583	DNA-binding transcription factor activity
IBG34_01580	COG0583	DNA-binding transcription factor activity
IBG34_01585	COG1028	Short-chain dehydrogenase reductase Sdr
IBG34_01590	COG0616	signal peptide processing
IBG34_01595	COG3724	N-succinylarginine dihydrolase activity
IBG34_01615	COG0840	transmembrane signaling receptor activity
IBG34_01635	COG4608	Belongs to the ABC transporter superfamily
IBG34_01640	COG0444	Belongs to the ABC transporter superfamily
IBG34_01665	COG1073	alpha beta
IBG34_01665	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
IBG34_01665	COG3064	Membrane
IBG34_01675	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
IBG34_01695	COG1677	Flagellar hook-basal body complex protein FliE
IBG34_01705	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
IBG34_01770	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
IBG34_01795	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
IBG34_01805	COG2201	protein-glutamate methylesterase activity
IBG34_01815	COG1360	Flagellar Motor Protein
IBG34_01820	COG1192	Involved in chromosome partitioning
IBG34_01830	COG0835	chemotaxis
IBG34_01845	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
IBG34_01850	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
IBG34_01855	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
IBG34_01860	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
IBG34_01870	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
IBG34_01875	COG4235	cytochrome complex assembly
IBG34_01875	COG3088	subunit of a heme lyase
IBG34_01895	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
IBG34_01900	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
IBG34_01900	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
IBG34_01915	COG0259	pyridoxamine-phosphate oxidase activity
IBG34_01950	COG3153	acetyltransferase
IBG34_01975	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
IBG34_02000	COG2801	Transposase and inactivated derivatives
IBG34_02010	COG0582	viral genome integration into host DNA
IBG34_02020	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
IBG34_02025	COG2867	negative regulation of translational initiation
IBG34_02030	COG2914	Belongs to the UPF0125 (RnfH) family
IBG34_02035	COG0702	epimerase
IBG34_02040	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IBG34_02045	COG1454	alcohol dehydrogenase
IBG34_02055	COG0564	pseudouridine synthase activity
IBG34_02085	COG1280	lysine exporter protein (LysE YggA)
IBG34_02095	COG3263	regulation of cellular component size
IBG34_02105	COG1876	peptidase activity
IBG34_02110	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
IBG34_02115	COG1393	Belongs to the ArsC family
IBG34_02125	COG3069	C4-dicarboxylate transmembrane transporter activity
IBG34_02165	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
IBG34_02170	COG0156	8-amino-7-oxononanoate synthase activity
IBG34_02175	COG1073	alpha beta
IBG34_02175	COG2226	methyltransferase
IBG34_02180	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
IBG34_02185	COG0501	Belongs to the peptidase M48B family
IBG34_02205	COG2841	Protein conserved in bacteria
IBG34_02215	COG0534	Mate efflux family protein
IBG34_02250	COG1309	transcriptional regulator
IBG34_02265	COG0791	NLP P60 protein
IBG34_02270	COG0583	DNA-binding transcription factor activity
IBG34_02290	COG0500	methyltransferase
IBG34_02295	COG4106	trans-aconitate 2-methyltransferase activity
IBG34_02300	COG1801	Protein of unknown function DUF72
IBG34_02305	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
IBG34_02310	COG0217	transcriptional regulatory protein
IBG34_02320	COG1846	Transcriptional regulator
IBG34_02320	COG1940	carbohydrate kinase activity
IBG34_02325	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
IBG34_02330	COG0363	glucosamine-6-phosphate deaminase activity
IBG34_02335	COG2190	(PTS) system
IBG34_02335	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IBG34_02335	COG1263	PTS System
IBG34_02360	COG2080	2 iron, 2 sulfur cluster binding
IBG34_02375	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
IBG34_02380	COG0735	belongs to the Fur family
IBG34_02390	COG0716	FMN binding
IBG34_02405	COG0596	Alpha beta hydrolase
IBG34_02410	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
IBG34_02415	COG0033	Phosphoglucomutase
IBG34_02430	COG2951	lytic endotransglycosylase activity
IBG34_02435	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
IBG34_02440	COG4136	ATPase activity
IBG34_02450	COG4134	Bacterial extracellular solute-binding protein
IBG34_02460	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
IBG34_02470	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
IBG34_02480	COG0729	surface antigen
IBG34_02505	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
IBG34_02545	COG0741	lytic transglycosylase activity
IBG34_02545	COG1388	LysM domain
IBG34_02550	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
IBG34_02555	COG2226	methyltransferase
IBG34_02560	COG0328	RNA-DNA hybrid ribonuclease activity
IBG34_02565	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IBG34_02585	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
IBG34_02590	COG0121	glutamine amidotransferase
IBG34_02600	COG0391	Required for morphogenesis under gluconeogenic growth conditions
IBG34_02625	COG2197	response regulator
IBG34_02630	COG3850	Histidine kinase
IBG34_02650	COG0243	molybdopterin cofactor binding
IBG34_02655	COG0437	4 iron, 4 sulfur cluster binding
IBG34_02660	COG0348	domain, Protein
IBG34_02670	COG3005	denitrification pathway
IBG34_02675	COG0521	Mo-molybdopterin cofactor biosynthetic process
IBG34_02680	COG0315	cyclic pyranopterin monophosphate synthase activity
IBG34_02685	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
IBG34_02690	COG0314	molybdopterin synthase activity
IBG34_02705	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
IBG34_02710	COG0596	Alpha beta hydrolase
IBG34_02715	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
IBG34_02725	COG0302	gtp cyclohydrolase
IBG34_02730	COG0840	transmembrane signaling receptor activity
IBG34_02745	COG0583	DNA-binding transcription factor activity
IBG34_02760	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
IBG34_02775	COG2195	Cleaves the N-terminal amino acid of tripeptides
IBG34_02780	COG1166	arginine decarboxylase activity
IBG34_02820	COG1187	pseudouridine synthase activity
IBG34_02835	COG0583	DNA-binding transcription factor activity
IBG34_02865	COG2979	Protein of unknown function (DUF533)
IBG34_02875	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IBG34_02885	COG1294	oxidase, subunit
IBG34_02895	COG2814	Major facilitator Superfamily
IBG34_02900	COG0656	L-ascorbic acid biosynthetic process
IBG34_02925	COG0583	DNA-binding transcription factor activity
IBG34_02930	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
IBG34_02935	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
IBG34_02940	COG2271	Major facilitator Superfamily
IBG34_02945	COG1349	DNA-binding transcription factor activity
IBG34_02955	COG0584	glycerophosphoryl diester phosphodiesterase
IBG34_02960	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
IBG34_02965	COG0287	Prephenate dehydrogenase
IBG34_02965	COG1605	Chorismate mutase
IBG34_02975	COG3085	chromosome segregation
IBG34_02980	COG4574	serine-type endopeptidase inhibitor activity
IBG34_03000	COG1770	oligopeptidase
IBG34_03010	COG3083	sulfuric ester hydrolase activity
IBG34_03015	COG3082	Protein of unknown function (DUF1414)
IBG34_03020	COG3081	Nucleoid-associated protein
IBG34_03025	COG2182	Extracellular solute-binding protein
IBG34_03035	COG3833	ABC-type maltose transport systems, permease component
IBG34_03040	COG3842	ATPase activity
IBG34_03065	COG0425	Belongs to the sulfur carrier protein TusA family
IBG34_03070	COG4783	chaperone-mediated protein folding
IBG34_03100	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IBG34_03110	COG2431	L-lysine efflux transmembrane transporter activity
IBG34_03120	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IBG34_03140	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
IBG34_03185	COG3039	Transposase
IBG34_03205	COG0301	tRNA thio-modification
IBG34_03205	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IBG34_03220	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
IBG34_03225	COG1334	flagellar protein FlaG
IBG34_03265	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
IBG34_03285	COG0346	lactoylglutathione lyase activity
IBG34_03290	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
IBG34_03300	COG4659	FMN binding
IBG34_03305	COG4658	electron transport chain
IBG34_03315	COG2878	Part of a membrane complex involved in electron transport
IBG34_03320	COG4657	Part of a membrane complex involved in electron transport
IBG34_03345	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
IBG34_03365	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
IBG34_03380	COG1566	PFAM secretion protein HlyD family protein
IBG34_03390	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
IBG34_03390	COG3264	Mechanosensitive ion channel
IBG34_03400	COG3279	Response regulator of the LytR AlgR family
IBG34_03405	COG3275	phosphorelay sensor kinase activity
IBG34_03415	COG1012	belongs to the aldehyde dehydrogenase family
IBG34_03415	COG1454	alcohol dehydrogenase
IBG34_03420	COG2095	MarC family integral membrane protein
IBG34_03430	COG0601	transmembrane transport
IBG34_03435	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IBG34_03440	COG0444	Belongs to the ABC transporter superfamily
IBG34_03455	COG0861	Integral membrane protein TerC family
IBG34_03460	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
IBG34_03470	COG1301	dicarboxylic acid transport
IBG34_03485	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
IBG34_03500	COG0537	adenosine 5'-monophosphoramidase activity
IBG34_03540	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
IBG34_03570	COG3150	esterase
IBG34_03575	COG1252	NADH dehydrogenase
IBG34_03585	COG0393	Putative heavy-metal-binding
IBG34_03600	COG0527	aspartate kinase activity
IBG34_03605	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
IBG34_03605	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
IBG34_03610	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
IBG34_03665	COG0577	efflux transmembrane transporter activity
IBG34_03695	COG2814	Major facilitator Superfamily
IBG34_03720	COG0672	)-iron permease
IBG34_03755	COG2308	Evidence 4 Homologs of previously reported genes of
IBG34_03770	COG0659	secondary active sulfate transmembrane transporter activity
IBG34_03960	COG2003	Belongs to the UPF0758 family
IBG34_04005	COG5377	YqaJ viral recombinase family
IBG34_04045	COG1160	GTP binding
IBG34_04090	COG4584	PFAM Integrase catalytic
IBG34_04140	COG3206	protein involved in exopolysaccharide biosynthesis
IBG34_04140	COG0489	protein tyrosine kinase activity
IBG34_04160	COG0438	transferase activity, transferring glycosyl groups
IBG34_04190	COG1442	glycosyl transferase family 8
IBG34_04210	COG3152	Membrane
IBG34_04215	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
IBG34_04225	COG1845	cytochrome c oxidase, subunit III
IBG34_04230	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
IBG34_04235	COG0109	protoheme IX farnesyltransferase activity
IBG34_04275	COG1484	DNA-dependent DNA replication
IBG34_04315	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IBG34_04325	COG0842	Transport permease protein
IBG34_04370	COG0582	viral genome integration into host DNA
IBG34_04395	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
IBG34_04400	COG0437	4 iron, 4 sulfur cluster binding
IBG34_04405	COG5557	Pfam Polysulphide reductase, NrfD
IBG34_04410	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
IBG34_04415	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
IBG34_04420	COG1773	rubredoxin
IBG34_04445	COG1124	(ABC) transporter
IBG34_04450	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
IBG34_04455	COG0375	protein maturation
IBG34_04460	COG0309	Hydrogenase expression formation protein (HypE)
IBG34_04470	COG0298	carbon dioxide binding
IBG34_04480	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
IBG34_04485	COG0326	Molecular chaperone. Has ATPase activity
IBG34_04490	COG0563	adenylate kinase activity
IBG34_04495	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
IBG34_04505	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IBG34_04525	COG3300	MHYT domain
IBG34_04525	COG5001	Diguanylate cyclase
IBG34_04530	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
IBG34_04550	COG1021	2,3-dihydroxybenzoate-AMP ligase
IBG34_04555	COG1535	isochorismatase
IBG34_04555	COG3433	isochorismatase activity
IBG34_04565	COG1028	Short-chain dehydrogenase reductase Sdr
IBG34_04575	COG3321	synthase
IBG34_04575	COG0300	oxidoreductase activity
IBG34_04575	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
IBG34_04575	COG0318	PFAM AMP-dependent synthetase and ligase
IBG34_04575	COG1028	Short-chain dehydrogenase reductase Sdr
IBG34_04580	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
IBG34_04585	COG2977	Belongs to the P-Pant transferase superfamily
IBG34_04590	COG1120	ATPase activity
IBG34_04595	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IBG34_04600	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IBG34_04605	COG4771	TonB-dependent receptor
IBG34_04630	COG0644	oxidoreductase
IBG34_04630	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
IBG34_04635	COG0644	oxidoreductase
IBG34_04635	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
IBG34_04655	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
IBG34_04665	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
IBG34_04670	COG0861	Integral membrane protein TerC family
IBG34_04685	COG1022	Amp-dependent synthetase and ligase
IBG34_04690	COG0295	cytidine deaminase activity
IBG34_04695	COG1346	cytolysis
IBG34_04700	COG1380	Effector of murein hydrolase LrgA
IBG34_04705	COG3345	alpha-galactosidase
IBG34_04715	COG2925	Exonuclease
IBG34_04720	COG0582	viral genome integration into host DNA
IBG34_04765	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
IBG34_04795	COG1396	sequence-specific DNA binding
IBG34_04840	COG3646	Phage regulatory protein
IBG34_04855	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
IBG34_05015	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
IBG34_05025	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
IBG34_05040	COG2160	L-arabinose isomerase activity
IBG34_05050	COG1069	ribulokinase activity
IBG34_05055	COG1879	ABC-type sugar transport system periplasmic component
IBG34_05060	COG1129	ABC transporter
IBG34_05075	COG0257	Belongs to the bacterial ribosomal protein bL36 family
IBG34_05080	COG0254	rRNA binding
IBG34_05095	COG1451	nucleotide metabolic process
IBG34_05110	COG3069	C4-dicarboxylate transmembrane transporter activity
IBG34_05125	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
IBG34_05150	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
IBG34_05155	COG1053	succinate dehydrogenase
IBG34_05170	COG0508	dehydrogenase complex catalyzes the overall conversion of
IBG34_05175	COG0045	succinate-CoA ligase (ADP-forming) activity
IBG34_05180	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
IBG34_05195	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
IBG34_05205	COG3842	ATPase activity
IBG34_05210	COG1840	ABC-type Fe3 transport system, periplasmic component
IBG34_05220	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
IBG34_05225	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
IBG34_05230	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IBG34_05235	COG1882	Formate acetyltransferase
IBG34_05245	COG1944	ATP diphosphatase activity
IBG34_05265	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
IBG34_05270	COG1278	Cold shock
IBG34_05275	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
IBG34_05280	COG0542	response to heat
IBG34_05285	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
IBG34_05290	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
IBG34_05295	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
IBG34_05305	COG3706	GGDEF domain
IBG34_05310	COG0492	ferredoxin-NADP+ reductase activity
IBG34_05315	COG0686	Belongs to the AlaDH PNT family
IBG34_05325	COG0531	amino acid
IBG34_05325	COG1674	ftsk spoiiie
IBG34_05330	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
IBG34_05340	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
IBG34_05345	COG1286	toxin biosynthetic process
IBG34_05350	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
IBG34_05355	COG2723	6-phospho-beta-galactosidase activity
IBG34_05360	COG1263	PTS System
IBG34_05360	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IBG34_05365	COG1609	Transcriptional regulator
IBG34_05375	COG4172	Belongs to the ABC transporter superfamily
IBG34_05405	COG1842	Phage shock protein A
IBG34_05435	COG2154	pterin-4-alpha-carbinolamine dehydratase
IBG34_05455	COG2885	chlorophyll binding
IBG34_05465	COG1570	exodeoxyribonuclease VII activity
IBG34_05475	COG0366	Alpha amylase catalytic
IBG34_05475	COG1874	Beta-galactosidase
IBG34_05485	COG0516	GMP reductase activity
IBG34_05485	COG0517	IMP dehydrogenase activity
IBG34_05490	COG0519	Catalyzes the synthesis of GMP from XMP
IBG34_05490	COG0518	GMP synthase (glutamine-hydrolyzing) activity
IBG34_05520	COG2062	phosphohistidine phosphatase, SixA
IBG34_05540	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
IBG34_05560	COG1136	(ABC) transporter
IBG34_05565	COG4591	ABC-type transport system involved in lipoprotein release permease component
IBG34_05570	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
IBG34_05585	COG0544	peptidyl-prolyl cis-trans isomerase activity
IBG34_05590	COG0740	serine-type endopeptidase activity
IBG34_05605	COG0776	regulation of translation
IBG34_05610	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
IBG34_05615	COG0488	(ABC) transporter
IBG34_05620	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
IBG34_05625	COG3162	membrane
IBG34_05640	COG1024	Enoyl-CoA hydratase
IBG34_05645	COG1115	amino acid carrier protein
IBG34_05660	COG1584	GPR1 FUN34 yaaH family protein
IBG34_05695	COG1960	acyl-CoA dehydrogenase activity
IBG34_05705	COG1960	acyl-CoA dehydrogenase activity
IBG34_05710	COG1024	Enoyl-CoA hydratase
IBG34_05715	COG1024	Enoyl-CoA hydratase
IBG34_05725	COG1028	Short-chain dehydrogenase reductase Sdr
IBG34_05775	COG1172	Belongs to the binding-protein-dependent transport system permease family
IBG34_05790	COG5433	transposase activity
IBG34_05815	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
IBG34_05875	COG0583	DNA-binding transcription factor activity
IBG34_05885	COG1560	Kdo2-lipid A biosynthetic process
IBG34_05890	COG1560	Kdo2-lipid A biosynthetic process
IBG34_05915	COG0417	DNA replication proofreading
IBG34_05945	COG0534	Mate efflux family protein
IBG34_05955	COG0307	riboflavin synthase, alpha
IBG34_05965	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IBG34_05975	COG0697	spore germination
IBG34_05980	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
IBG34_06020	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
IBG34_06025	COG3099	Belongs to the UPF0263 family
IBG34_06035	COG2894	cell division
IBG34_06040	COG0850	regulation of cytokinetic process
IBG34_06045	COG3100	YcgL domain-containing protein
IBG34_06095	COG2067	long-chain fatty acid transport protein
IBG34_06140	COG0714	Associated with various cellular activities
IBG34_06150	COG1024	Enoyl-CoA hydratase
IBG34_06150	COG1250	3-hydroxyacyl-CoA dehydrogenase
IBG34_06160	COG4681	YaeQ
IBG34_06220	COG3134	Outer membrane lipoprotein
IBG34_06255	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
IBG34_06255	COG0140	phosphoribosyl-ATP diphosphatase activity
IBG34_06260	COG0107	imidazoleglycerol-phosphate synthase activity
IBG34_06275	COG3437	response regulator, receiver
IBG34_06285	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
IBG34_06290	COG0131	Imidazoleglycerol-phosphate dehydratase
IBG34_06290	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
IBG34_06295	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
IBG34_06305	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
IBG34_06320	COG1214	PFAM Peptidase M22, glycoprotease
IBG34_06330	COG0596	Alpha beta hydrolase
IBG34_06350	COG0697	spore germination
IBG34_06360	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IBG34_06365	COG2832	Protein of unknown function (DUF454)
IBG34_06370	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
IBG34_06380	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
IBG34_06385	COG1335	isochorismatase
IBG34_06395	COG0583	DNA-binding transcription factor activity
IBG34_06400	COG3314	Sporulation integral membrane protein YlbJ
IBG34_06405	COG2197	response regulator
IBG34_06410	COG0617	tRNA 3'-terminal CCA addition
IBG34_06410	COG0517	IMP dehydrogenase activity
IBG34_06410	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
IBG34_06425	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
IBG34_06430	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
IBG34_06435	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
IBG34_06440	COG0709	Synthesizes selenophosphate from selenide and ATP
IBG34_06455	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
IBG34_06460	COG0840	transmembrane signaling receptor activity
IBG34_06465	COG1254	Belongs to the acylphosphatase family
IBG34_06475	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IBG34_06475	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IBG34_06480	COG0489	protein tyrosine kinase activity
IBG34_06485	COG0572	uridine kinase
IBG34_06490	COG0717	Belongs to the dCTP deaminase family
IBG34_06495	COG0306	phosphate transporter
IBG34_06510	COG0424	maF-like protein
IBG34_06520	COG1399	metal-binding, possibly nucleic acid-binding protein
IBG34_06525	COG0333	Belongs to the bacterial ribosomal protein bL32 family
IBG34_06535	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
IBG34_06545	COG1028	Short-chain dehydrogenase reductase Sdr
IBG34_06550	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
IBG34_06555	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
IBG34_06560	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
IBG34_06565	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
IBG34_06570	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
IBG34_06575	COG0470	DNA polymerase III
IBG34_06595	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
IBG34_06595	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
IBG34_06605	COG2995	paraquat-inducible protein a
IBG34_06615	COG3141	response to X-ray
IBG34_06625	COG1067	ATP-dependent peptidase activity
IBG34_06630	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
IBG34_06645	COG0488	(ABC) transporter
IBG34_06655	COG0116	Belongs to the methyltransferase superfamily
IBG34_06655	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
IBG34_06665	COG0167	dihydroorotate dehydrogenase activity
IBG34_06680	COG0308	aminopeptidase N
IBG34_06690	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
IBG34_06695	COG1956	GAF domain-containing protein
IBG34_06705	COG3278	Belongs to the heme-copper respiratory oxidase family
IBG34_06720	COG2010	Cytochrome c
IBG34_06745	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
IBG34_06775	COG1869	D-ribose catabolic process
IBG34_06780	COG1129	ABC transporter
IBG34_06785	COG1172	Belongs to the binding-protein-dependent transport system permease family
IBG34_06790	COG1879	ABC-type sugar transport system periplasmic component
IBG34_06795	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IBG34_06800	COG1609	Transcriptional regulator
IBG34_06805	COG5001	Diguanylate cyclase
IBG34_06805	COG3300	MHYT domain
IBG34_06830	COG2205	protein histidine kinase activity
IBG34_06830	COG0784	Response regulator, receiver
IBG34_06835	COG0776	regulation of translation
IBG34_06840	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IBG34_06840	COG0072	phenylalanine-tRNA ligase activity
IBG34_06845	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
IBG34_06850	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
IBG34_06855	COG0291	Belongs to the bacterial ribosomal protein bL35 family
IBG34_06860	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
IBG34_06865	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
IBG34_06895	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
IBG34_06915	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
IBG34_06925	COG3313	Fe-S protein
IBG34_06935	COG1105	Belongs to the carbohydrate kinase PfkB family
IBG34_06945	COG1609	Transcriptional regulator
IBG34_06950	COG0814	amino acid
IBG34_06955	COG3788	relative of glutathione S-transferase, MAPEG superfamily
IBG34_06960	COG0513	Belongs to the DEAD box helicase family
IBG34_06975	COG2890	protein-(glutamine-N5) methyltransferase activity
IBG34_06980	COG2840	Smr protein MutS2
IBG34_07015	COG2824	Alkylphosphonate utilization operon protein PhnA
IBG34_07040	COG0588	phosphoglycerate mutase activity
IBG34_07065	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
IBG34_07070	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
IBG34_07080	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
IBG34_07085	COG1434	Gram-negative-bacterium-type cell wall biogenesis
IBG34_07095	COG0205	6-phosphofructokinase activity
IBG34_07105	COG1011	Hydrolase
IBG34_07110	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
IBG34_07190	COG3148	PFAM DTW domain containing protein
IBG34_07200	COG1181	Belongs to the D-alanine--D-alanine ligase family
IBG34_07210	COG0386	Belongs to the glutathione peroxidase family
IBG34_07215	COG0513	Belongs to the DEAD box helicase family
IBG34_07230	COG1742	UPF0060 membrane protein
IBG34_07255	COG2329	Antibiotic biosynthesis monooxygenase
IBG34_07260	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
IBG34_07290	COG2501	S4 domain
IBG34_07315	COG1132	(ABC) transporter
IBG34_07330	COG3118	belongs to the thioredoxin family
IBG34_07375	COG0814	amino acid
IBG34_07380	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
IBG34_07385	COG0514	ATP-dependent DNA helicase (RecQ)
IBG34_07390	COG2766	serine protein kinase
IBG34_07395	COG2718	Belongs to the UPF0229 family
IBG34_07400	COG2719	SpoVR family
IBG34_07415	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
IBG34_07425	COG0586	Pfam SNARE associated Golgi protein
IBG34_07450	COG2985	domain, Protein
IBG34_07450	COG0569	domain protein
IBG34_07485	COG4565	transcriptional regulatory protein
IBG34_07490	COG3290	protein histidine kinase activity
IBG34_07495	COG1940	carbohydrate kinase activity
IBG34_07495	COG1846	Transcriptional regulator
IBG34_07505	COG3012	SEC-C Motif Domain Protein
IBG34_07515	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
IBG34_07540	COG0437	4 iron, 4 sulfur cluster binding
IBG34_07545	COG3301	Polysulphide reductase, NrfD
IBG34_07550	COG1138	Cytochrome C-type biogenesis protein
IBG34_07575	COG3046	protein related to deoxyribodipyrimidine photolyase
IBG34_07580	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
IBG34_07625	COG3706	GGDEF domain
IBG34_07645	COG2910	NAD(P)H-binding
IBG34_07690	COG3039	Transposase
IBG34_07760	COG3550	peptidyl-serine autophosphorylation
IBG34_07795	COG1435	thymidine kinase activity
IBG34_07800	COG1757	Na H antiporter
IBG34_07810	COG2096	Adenosyltransferase
IBG34_07815	COG3530	Putative quorum-sensing-regulated virulence factor
IBG34_07820	COG0602	queuosine metabolic process
IBG34_07825	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
IBG34_07845	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
IBG34_07855	COG0776	regulation of translation
IBG34_07860	COG0539	negative regulation of cytoplasmic translation
IBG34_07865	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
IBG34_07870	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
IBG34_07895	COG0778	Nitroreductase
IBG34_07905	COG3300	MHYT domain
IBG34_07905	COG5001	Diguanylate cyclase
IBG34_07920	COG3437	response regulator, receiver
IBG34_07945	COG4989	oxidoreductase activity
IBG34_07950	COG0724	RNA recognition motif
IBG34_07970	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
IBG34_07995	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
IBG34_08000	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
IBG34_08020	COG1034	ATP synthesis coupled electron transport
IBG34_08025	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
IBG34_08030	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
IBG34_08035	COG0839	Belongs to the complex I subunit 6 family
IBG34_08040	COG0713	ATP synthesis coupled electron transport
IBG34_08050	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
IBG34_08055	COG1007	ATP synthesis coupled electron transport
IBG34_08060	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
IBG34_08060	COG0047	phosphoribosylformylglycinamidine synthase activity
IBG34_08065	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
IBG34_08070	COG1645	bacterial-type flagellum-dependent swarming motility
IBG34_08080	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IBG34_08085	COG2976	Protein conserved in bacteria
IBG34_08090	COG0124	histidyl-tRNA synthetase
IBG34_08095	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
IBG34_08110	COG0820	rRNA (adenine-C2-)-methyltransferase activity
IBG34_08115	COG0105	UTP biosynthetic process
IBG34_08130	COG0633	Ferredoxin
IBG34_08135	COG0443	Heat shock 70 kDa protein
IBG34_08140	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
IBG34_08150	COG0822	iron-sulfur transferase activity
IBG34_08175	COG3154	lipid carrier protein
IBG34_08180	COG0826	peptidase U32
IBG34_08200	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
IBG34_08205	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
IBG34_08210	COG1862	Preprotein translocase
IBG34_08215	COG0343	queuine tRNA-ribosyltransferase activity
IBG34_08220	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
IBG34_08225	COG0517	IMP dehydrogenase activity
IBG34_08235	COG3634	alkyl hydroperoxide reductase activity
IBG34_08280	COG5642	Protein of unknown function (DUF2384)
IBG34_08330	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
IBG34_08355	COG5433	transposase activity
IBG34_08360	COG0732	type I restriction modification DNA specificity domain
IBG34_08375	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
IBG34_08375	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
IBG34_08380	COG0509	glycine decarboxylation via glycine cleavage system
IBG34_08385	COG0404	The glycine cleavage system catalyzes the degradation of glycine
IBG34_08395	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IBG34_08415	COG1609	Transcriptional regulator
IBG34_08425	COG1172	Belongs to the binding-protein-dependent transport system permease family
IBG34_08440	COG0673	inositol 2-dehydrogenase activity
IBG34_08445	COG2814	Major facilitator Superfamily
IBG34_08455	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IBG34_08460	COG0601	transmembrane transport
IBG34_08470	COG0625	glutathione transferase activity
IBG34_08485	COG0483	inositol monophosphate 1-phosphatase activity
IBG34_08495	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IBG34_08500	COG2056	Na+-H+ antiporter family
IBG34_08505	COG5001	Diguanylate cyclase
IBG34_08505	COG3300	MHYT domain
IBG34_08515	COG0513	Belongs to the DEAD box helicase family
IBG34_08520	COG2050	protein possibly involved in aromatic compounds catabolism
IBG34_08530	COG0247	lactate metabolic process
IBG34_08530	COG0277	FAD linked oxidase domain protein
IBG34_08540	COG5433	transposase activity
IBG34_08565	COG0647	UMP catabolic process
IBG34_08575	COG0367	asparagine synthase
IBG34_08585	COG0625	glutathione transferase activity
IBG34_08595	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
IBG34_08610	COG0564	pseudouridine synthase activity
IBG34_08625	COG0318	PFAM AMP-dependent synthetase and ligase
IBG34_08670	COG2855	membrane
IBG34_08680	COG2814	Major facilitator Superfamily
IBG34_08700	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
IBG34_08710	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
IBG34_08730	COG0670	Belongs to the BI1 family
IBG34_08740	COG1289	transmembrane transporter activity
IBG34_08745	COG2920	part of a sulfur-relay system
IBG34_08750	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
IBG34_08755	COG0285	dihydrofolate synthase activity
IBG34_08760	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
IBG34_08765	COG0101	tRNA pseudouridine synthase activity
IBG34_08775	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
IBG34_08785	COG0671	phosphoesterase, PA-phosphatase related
IBG34_08790	COG1464	Belongs to the NlpA lipoprotein family
IBG34_08820	COG0574	Belongs to the PEP-utilizing enzyme family
IBG34_08820	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
IBG34_08825	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
IBG34_08905	COG1242	4 iron, 4 sulfur cluster binding
IBG34_08910	COG0067	glutamate synthase
IBG34_08910	COG0069	glutamate synthase activity
IBG34_08910	COG0070	glutamate synthase
IBG34_08915	COG0493	'glutamate synthase
IBG34_08930	COG0513	Belongs to the DEAD box helicase family
IBG34_08960	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
IBG34_08970	COG0505	Belongs to the CarA family
IBG34_09000	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
IBG34_09005	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
IBG34_09055	COG0023	Translation Initiation Factor
IBG34_09060	COG2119	membrane
IBG34_09095	COG2203	Gaf domain
IBG34_09095	COG2199	diguanylate cyclase activity
IBG34_09105	COG3039	Transposase
IBG34_09115	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
IBG34_09125	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
IBG34_09130	COG2261	transglycosylase associated protein
IBG34_09135	COG0625	glutathione transferase activity
IBG34_09180	COG5433	transposase activity
IBG34_09195	COG3039	Transposase
IBG34_09260	COG0322	excinuclease ABC activity
IBG34_09265	COG2197	response regulator
IBG34_09270	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
IBG34_09275	COG2835	tetraacyldisaccharide 4'-kinase activity
IBG34_09280	COG1663	tetraacyldisaccharide 4'-kinase activity
IBG34_09285	COG1132	(ABC) transporter
IBG34_09305	COG0433	COG0433 Predicted ATPase
IBG34_09310	COG1448	Aminotransferase
IBG34_09325	COG1199	ATP-dependent helicase activity
IBG34_09335	COG0123	including yeast histone deacetylase and acetoin utilization protein
IBG34_09340	COG0477	Major facilitator Superfamily
IBG34_09370	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
IBG34_09375	COG2197	response regulator
IBG34_09385	COG2271	Major facilitator Superfamily
IBG34_09395	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IBG34_09400	COG0765	amino acid transport
IBG34_09405	COG1126	abc transporter atp-binding protein
IBG34_09415	COG0531	amino acid
IBG34_09430	COG1253	flavin adenine dinucleotide binding
IBG34_09440	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
IBG34_09445	COG0581	inorganic phosphate transmembrane transporter activity
IBG34_09450	COG0573	inorganic phosphate transmembrane transporter activity
IBG34_09475	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
IBG34_09495	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
IBG34_09500	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
IBG34_09505	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
IBG34_09510	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
IBG34_09535	COG2716	regulation of RNA biosynthetic process
IBG34_09540	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
IBG34_09580	COG1706	bacterial-type flagellum-dependent cell motility
IBG34_09585	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
IBG34_09600	COG1749	Flagellar hook protein flgE
IBG34_09615	COG1815	bacterial-type flagellum-dependent cell motility
IBG34_09620	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
IBG34_09625	COG0784	Response regulator, receiver
IBG34_09625	COG0835	chemotaxis
IBG34_09630	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
IBG34_09650	COG4166	transmembrane transport
IBG34_09660	COG1187	pseudouridine synthase activity
IBG34_09675	COG0697	spore germination
IBG34_09705	COG1278	Cold shock
IBG34_09745	COG3132	Protein of unknown function, DUF480
IBG34_09765	COG3039	Transposase
IBG34_09775	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
IBG34_09790	COG0529	Catalyzes the synthesis of activated sulfate
IBG34_09795	COG0471	metal ion transport
IBG34_09795	COG3273	potassium ion transport
IBG34_09805	COG2895	sulfate adenylyltransferase (ATP) activity
IBG34_09825	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
IBG34_09830	COG1216	Glycosyl transferase, family 2
IBG34_09855	COG1091	dTDP-4-dehydrorhamnose reductase activity
IBG34_09880	COG1737	Transcriptional regulator
IBG34_09885	COG0469	pyruvate kinase activity
IBG34_09900	COG1960	acyl-CoA dehydrogenase activity
IBG34_09910	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
IBG34_09925	COG5377	YqaJ viral recombinase family
IBG34_09945	COG2003	Belongs to the UPF0758 family
IBG34_09965	COG5433	transposase activity
IBG34_09995	COG3385	transposase activity
IBG34_10060	COG0625	glutathione transferase activity
IBG34_10065	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
IBG34_10075	COG0583	DNA-binding transcription factor activity
IBG34_10085	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
IBG34_10100	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
IBG34_10120	COG1846	Transcriptional regulator
IBG34_10125	COG0583	DNA-binding transcription factor activity
IBG34_10150	COG4983	Phage plasmid primase, P4 family domain protein
IBG34_10160	COG0582	viral genome integration into host DNA
IBG34_10165	COG5433	transposase activity
IBG34_10170	COG0582	viral genome integration into host DNA
IBG34_10175	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
IBG34_10185	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IBG34_10190	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IBG34_10195	COG1309	transcriptional regulator
IBG34_10210	COG1946	Acyl-CoA thioesterase
IBG34_10220	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
IBG34_10230	COG0009	L-threonylcarbamoyladenylate synthase
IBG34_10235	COG0613	PHP domain protein
IBG34_10240	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
IBG34_10245	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
IBG34_10245	COG0512	Glutamine amidotransferase of anthranilate synthase
IBG34_10260	COG0133	tryptophan synthase activity
IBG34_10300	COG1988	membrane-bound metal-dependent
IBG34_10305	COG1396	sequence-specific DNA binding
IBG34_10310	COG3550	peptidyl-serine autophosphorylation
IBG34_10330	COG0583	DNA-binding transcription factor activity
IBG34_10340	COG5507	3-demethylubiquinone-9 3-methyltransferase
IBG34_10345	COG2814	Major facilitator Superfamily
IBG34_10355	COG0109	protoheme IX farnesyltransferase activity
IBG34_10360	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
IBG34_10365	COG1845	cytochrome c oxidase, subunit III
IBG34_10370	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
IBG34_10375	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
IBG34_10380	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
IBG34_10385	COG0583	DNA-binding transcription factor activity
IBG34_10415	COG0071	Belongs to the small heat shock protein (HSP20) family
IBG34_10430	COG0708	Exodeoxyribonuclease III
IBG34_10440	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IBG34_10465	COG0577	efflux transmembrane transporter activity
IBG34_10465	COG1136	(ABC) transporter
IBG34_10470	COG0577	efflux transmembrane transporter activity
IBG34_10470	COG1136	(ABC) transporter
IBG34_10475	COG0577	efflux transmembrane transporter activity
IBG34_10475	COG1136	(ABC) transporter
IBG34_10480	COG1566	PFAM secretion protein HlyD family protein
IBG34_10505	COG0640	Transcriptional regulator
IBG34_10520	COG1285	pathogenesis
IBG34_10550	COG0484	heat shock protein binding
IBG34_10555	COG0443	Heat shock 70 kDa protein
IBG34_10560	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
IBG34_10570	COG3706	GGDEF domain
IBG34_10590	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IBG34_10595	COG1136	(ABC) transporter
IBG34_10595	COG0577	efflux transmembrane transporter activity
IBG34_10605	COG2375	cellular response to nickel ion
IBG34_10610	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
IBG34_10615	COG2916	Histone family protein nucleoid-structuring protein H-NS
IBG34_10620	COG0583	DNA-binding transcription factor activity
IBG34_10625	COG2610	gluconate transmembrane transporter activity
IBG34_10630	COG3048	D-serine ammonia-lyase activity
IBG34_10640	COG0538	isocitrate dehydrogenase activity
IBG34_10645	COG2207	Transcriptional regulator
IBG34_10650	COG1482	cell wall glycoprotein biosynthetic process
IBG34_10675	COG4932	domain protein
IBG34_10675	COG5492	domain, Protein
IBG34_10685	COG0477	Major facilitator Superfamily
IBG34_10685	COG2814	Major facilitator Superfamily
IBG34_10690	COG0457	Tetratricopeptide repeat
IBG34_10695	COG1940	carbohydrate kinase activity
IBG34_10705	COG3039	Transposase
IBG34_10715	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IBG34_10715	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
IBG34_10715	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IBG34_10725	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IBG34_10745	COG0482	sulfurtransferase activity
IBG34_10750	COG2915	High frequency lysogenization protein hflD homolog
IBG34_10755	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
IBG34_10760	COG2850	peptidyl-arginine hydroxylation
IBG34_10765	COG0469	pyruvate kinase activity
IBG34_10770	COG3264	Mechanosensitive ion channel
IBG34_10770	COG1196	nuclear chromosome segregation
IBG34_10845	COG2706	6-phosphogluconolactonase activity
IBG34_10870	COG0281	malic enzyme
IBG34_10880	COG1763	Mo-molybdopterin cofactor biosynthetic process
IBG34_10885	COG1289	transmembrane transporter activity
IBG34_10890	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
IBG34_10920	COG3220	belongs to the UPF0276 family
IBG34_10935	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
IBG34_10965	COG4319	ketosteroid isomerase
IBG34_10970	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
IBG34_10985	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
IBG34_10990	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
IBG34_11005	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
IBG34_11015	COG0745	RESPONSE REGULATOR receiver
IBG34_11030	COG4988	ABC transporter
IBG34_11035	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
IBG34_11055	COG1720	tRNA m6t6A37 methyltransferase activity
IBG34_11070	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
IBG34_11075	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
IBG34_11080	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
IBG34_11090	COG2190	(PTS) system
IBG34_11095	COG3038	cytochrome b561
IBG34_11110	COG0456	acetyltransferase
IBG34_11115	COG2974	May be involved in recombination
IBG34_11130	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
IBG34_11130	COG4651	solute:proton antiporter activity
IBG34_11165	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
IBG34_11170	COG1917	Cupin 2, conserved barrel domain protein
IBG34_11170	COG1396	sequence-specific DNA binding
IBG34_11185	COG0531	amino acid
IBG34_11190	COG0531	amino acid
IBG34_11200	COG1283	sodium-dependent phosphate transmembrane transporter activity
IBG34_11210	COG3384	dioxygenase
IBG34_11290	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
IBG34_11300	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
IBG34_11315	COG4263	nitrous-oxide reductase activity
IBG34_11335	COG1388	LysM domain
IBG34_11335	COG1376	ErfK ybiS ycfS ynhG family protein
IBG34_11350	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
IBG34_11355	COG0791	NLP P60 protein
IBG34_11365	COG3118	belongs to the thioredoxin family
IBG34_11375	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
IBG34_11380	COG0788	formyltetrahydrofolate deformylase activity
IBG34_11405	COG1196	nuclear chromosome segregation
IBG34_11405	COG0739	heme binding
IBG34_11405	COG0741	lytic transglycosylase activity
IBG34_11410	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
IBG34_11415	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
IBG34_11420	COG0673	inositol 2-dehydrogenase activity
IBG34_11440	COG3039	Transposase
IBG34_11445	COG1032	radical SAM domain protein
IBG34_11460	COG3706	GGDEF domain
IBG34_11470	COG0733	neurotransmitter:sodium symporter activity
IBG34_11500	COG0281	malic enzyme
IBG34_11510	COG0534	Mate efflux family protein
IBG34_11535	COG2233	PERMEase
IBG34_11545	COG0095	Lipoate-protein ligase
IBG34_11550	COG1115	amino acid carrier protein
IBG34_11555	COG0019	diaminopimelate decarboxylase activity
IBG34_11565	COG0678	peroxiredoxin activity
IBG34_11570	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
IBG34_11580	COG1126	abc transporter atp-binding protein
IBG34_11590	COG4597	amino acid ABC transporter
IBG34_11595	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IBG34_11615	COG0545	Peptidyl-prolyl cis-trans isomerase
IBG34_11630	COG3142	Participates in the control of copper homeostasis
IBG34_11635	COG1940	carbohydrate kinase activity
IBG34_11655	COG5002	protein histidine kinase activity
IBG34_11660	COG0745	RESPONSE REGULATOR receiver
IBG34_11665	COG0346	lactoylglutathione lyase activity
IBG34_11670	COG3706	GGDEF domain
IBG34_11690	COG0697	spore germination
IBG34_11705	COG0281	malic enzyme
IBG34_11720	COG1566	PFAM secretion protein HlyD family protein
IBG34_11750	COG0602	queuosine metabolic process
IBG34_11755	COG1328	CTP reductase activity
IBG34_11770	COG3115	cell septum assembly
IBG34_11785	COG2860	membrane
IBG34_11795	COG3108	Peptidase M15
IBG34_11800	COG2989	Protein conserved in bacteria
IBG34_11870	COG3706	GGDEF domain
IBG34_11880	COG3590	peptidase
IBG34_11895	COG0488	(ABC) transporter
IBG34_11915	COG0675	Transposase, IS605 OrfB family
IBG34_11930	COG0583	DNA-binding transcription factor activity
IBG34_11940	COG0825	malonyl-CoA metabolic process
IBG34_11950	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
IBG34_11955	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
IBG34_11960	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
IBG34_11965	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
IBG34_11970	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
IBG34_11985	COG0750	zinc metalloprotease
IBG34_11990	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
IBG34_11995	COG0575	Belongs to the CDS family
IBG34_12000	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
IBG34_12005	COG0233	cytoplasmic translational termination
IBG34_12010	COG0528	UMP kinase activity
IBG34_12015	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
IBG34_12020	COG0052	Belongs to the universal ribosomal protein uS2 family
IBG34_12025	COG0024	Methionine aminopeptidase
IBG34_12030	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
IBG34_12035	COG2171	N-acyltransferase activity
IBG34_12045	COG1263	PTS System
IBG34_12045	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IBG34_12065	COG0564	pseudouridine synthase activity
IBG34_12070	COG3098	single-species biofilm formation
IBG34_12095	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
IBG34_12105	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
IBG34_12105	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
IBG34_12120	COG1611	Belongs to the LOG family
IBG34_12125	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IBG34_12135	COG0473	3-isopropylmalate dehydrogenase activity
IBG34_12145	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
IBG34_12150	COG2363	Small membrane protein
IBG34_12160	COG0583	DNA-binding transcription factor activity
IBG34_12165	COG0840	transmembrane signaling receptor activity
IBG34_12170	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
IBG34_12185	COG1477	protein flavinylation
IBG34_12190	COG2871	sodium ion transport
IBG34_12195	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
IBG34_12200	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
IBG34_12205	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
IBG34_12210	COG1805	sodium ion transport
IBG34_12215	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
IBG34_12225	COG0271	Belongs to the BolA IbaG family
IBG34_12230	COG2813	Specifically methylates the guanine in position
IBG34_12240	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
IBG34_12250	COG2211	Major facilitator Superfamily
IBG34_12255	COG3248	Nucleoside-binding outer membrane protein
IBG34_12260	COG1666	GTP binding
IBG34_12265	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
IBG34_12315	COG1393	Belongs to the ArsC family
IBG34_12320	COG0798	PFAM Bile acid sodium symporter
IBG34_12330	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
IBG34_12345	COG0582	viral genome integration into host DNA
IBG34_12355	COG3311	Transcriptional regulator
IBG34_12445	COG2003	Belongs to the UPF0758 family
IBG34_12525	COG1136	(ABC) transporter
IBG34_12535	COG1262	PFAM Formylglycine-generating sulfatase enzyme
IBG34_12545	COG2314	TM2 domain
IBG34_12565	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
IBG34_12570	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
IBG34_12575	COG1151	hydroxylamine reductase activity
IBG34_12580	COG0783	Belongs to the Dps family
IBG34_12605	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
IBG34_12620	COG0300	oxidoreductase activity
IBG34_12635	COG0789	Transcriptional regulator
IBG34_12640	COG3272	Protein of unknown function (DUF1722)
IBG34_12665	COG0077	Prephenate dehydratase
IBG34_12665	COG1605	Chorismate mutase
IBG34_12700	COG2133	pyrroloquinoline quinone binding
IBG34_12710	COG1349	DNA-binding transcription factor activity
IBG34_12715	COG2084	Dehydrogenase
IBG34_12720	COG3395	kinase activity
IBG34_12725	COG0235	Class ii aldolase
IBG34_12730	COG3622	Belongs to the hyi family
IBG34_12735	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
IBG34_12740	COG2610	gluconate transmembrane transporter activity
IBG34_12760	COG0300	oxidoreductase activity
IBG34_12785	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
IBG34_12805	COG3813	Protein conserved in bacteria
IBG34_12820	COG5433	transposase activity
IBG34_12830	COG0826	peptidase U32
IBG34_12850	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
IBG34_12925	COG1566	PFAM secretion protein HlyD family protein
IBG34_12935	COG0114	fumarate hydratase activity
IBG34_12950	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
IBG34_12965	COG0737	Belongs to the 5'-nucleotidase family
IBG34_12985	COG2204	response regulator
IBG34_12990	COG0545	Peptidyl-prolyl cis-trans isomerase
IBG34_13005	COG1047	Peptidyl-prolyl cis-trans
IBG34_13010	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
IBG34_13025	COG0429	hydrolase of the alpha beta-hydrolase fold
IBG34_13030	COG4251	negative regulation of phosphorylation
IBG34_13030	COG2203	Gaf domain
IBG34_13030	COG3706	GGDEF domain
IBG34_13030	COG5001	Diguanylate cyclase
IBG34_13035	COG3089	Belongs to the UPF0270 family
IBG34_13040	COG3954	Phosphoribulokinase
IBG34_13055	COG1765	OsmC-like protein
IBG34_13080	COG2814	Major facilitator Superfamily
IBG34_13105	COG0748	coenzyme F420 binding
IBG34_13110	COG3721	Heme iron utilization protein
IBG34_13120	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IBG34_13145	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
IBG34_13165	COG0488	(ABC) transporter
IBG34_13175	COG2252	PERMEase
IBG34_13180	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
IBG34_13190	COG3178	'Phosphotransferase
IBG34_13205	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
IBG34_13210	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
IBG34_13215	COG2967	ApaG domain
IBG34_13220	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
IBG34_13245	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
IBG34_13250	COG0211	Belongs to the bacterial ribosomal protein bL27 family
IBG34_13255	COG0261	This protein binds to 23S rRNA in the presence of protein L20
IBG34_13265	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
IBG34_13270	COG0330	HflC and HflK could
IBG34_13275	COG0330	HflC and HflK could
IBG34_13280	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
IBG34_13285	COG1923	regulation of RNA biosynthetic process
IBG34_13290	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
IBG34_13295	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
IBG34_13305	COG0802	atpase or kinase
IBG34_13310	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
IBG34_13310	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
IBG34_13330	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
IBG34_13335	COG2011	ABC-type metal ion transport system permease component
IBG34_13340	COG1464	Belongs to the NlpA lipoprotein family
IBG34_13350	COG0840	transmembrane signaling receptor activity
IBG34_13370	COG0232	Belongs to the dGTPase family. Type 2 subfamily
IBG34_13375	COG2198	Histidine kinase
IBG34_13375	COG0784	Response regulator, receiver
IBG34_13375	COG5002	protein histidine kinase activity
IBG34_13410	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
IBG34_13415	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
IBG34_13425	COG2716	regulation of RNA biosynthetic process
IBG34_13430	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
IBG34_13435	COG3013	Belongs to the UPF0304 family
IBG34_13445	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
IBG34_13450	COG0280	phosphate acetyltransferase
IBG34_13450	COG0857	belongs to the CobB CobQ family
IBG34_13455	COG0440	acetolactate synthase activity
IBG34_13460	COG0028	Belongs to the TPP enzyme family
IBG34_13470	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
IBG34_13475	COG0671	phosphoesterase, PA-phosphatase related
IBG34_13485	COG3385	transposase activity
IBG34_13490	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
IBG34_13495	COG0473	3-isopropylmalate dehydrogenase activity
IBG34_13500	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
IBG34_13505	COG0066	3-isopropylmalate dehydratase activity
IBG34_13530	COG1178	ABC-type Fe3 transport system permease component
IBG34_13535	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
IBG34_13540	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
IBG34_13580	COG0316	Belongs to the HesB IscA family
IBG34_13595	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
IBG34_13610	COG0671	phosphoesterase, PA-phosphatase related
IBG34_13620	COG0583	DNA-binding transcription factor activity
IBG34_13625	COG2076	Multidrug Resistance protein
IBG34_13635	COG0346	lactoylglutathione lyase activity
IBG34_13655	COG1489	DNA binding
IBG34_13660	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
IBG34_13665	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
IBG34_13670	COG0617	tRNA 3'-terminal CCA addition
IBG34_13685	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
IBG34_13695	COG0842	Transport permease protein
IBG34_13700	COG1131	(ABC) transporter
IBG34_13715	COG0163	prenyltransferase activity
IBG34_13720	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
IBG34_13725	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
IBG34_13740	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
IBG34_13755	COG1136	(ABC) transporter
IBG34_13785	COG3039	Transposase
IBG34_13795	COG0529	Catalyzes the synthesis of activated sulfate
IBG34_13800	COG3273	potassium ion transport
IBG34_13800	COG0471	metal ion transport
IBG34_13805	COG2895	sulfate adenylyltransferase (ATP) activity
IBG34_13810	COG0175	sulfate reduction
IBG34_13820	COG0330	HflC and HflK could
IBG34_13825	COG1585	Membrane protein implicated in regulation of membrane protease activity
IBG34_13835	COG0673	inositol 2-dehydrogenase activity
IBG34_13845	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
IBG34_13850	COG0635	Involved in the biosynthesis of porphyrin-containing compound
IBG34_13855	COG3036	rescue of stalled ribosome
IBG34_13870	COG0138	bifunctional purine biosynthesis protein purh
IBG34_13875	COG0151	Belongs to the GarS family
IBG34_13905	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
IBG34_13915	COG1610	YqeY-like protein
IBG34_13920	COG0828	Belongs to the bacterial ribosomal protein bS21 family
IBG34_13925	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
IBG34_13935	COG1388	LysM domain
IBG34_13935	COG4942	peptidase
IBG34_13945	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
IBG34_13950	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
IBG34_13955	COG0585	pseudouridine synthase activity
IBG34_13965	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
IBG34_13970	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
IBG34_13975	COG0148	phosphopyruvate hydratase activity
IBG34_13980	COG0504	CTP synthase activity
IBG34_13985	COG3956	TIGRFAM MazG family protein
IBG34_14005	COG4807	Protein conserved in bacteria
IBG34_14010	COG3023	N-Acetylmuramoyl-L-alanine amidase
IBG34_14015	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
IBG34_14020	COG1381	Involved in DNA repair and RecF pathway recombination
IBG34_14030	COG0571	ribonuclease III activity
IBG34_14035	COG0681	Belongs to the peptidase S26 family
IBG34_14040	COG0481	GTPase activity
IBG34_14060	COG1595	DNA-templated transcription, initiation
IBG34_14065	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
IBG34_14085	COG0583	DNA-binding transcription factor activity
IBG34_14115	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
IBG34_14120	COG0191	fructose-bisphosphate aldolase activity
IBG34_14125	COG0126	phosphoglycerate kinase activity
IBG34_14130	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
IBG34_14140	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
IBG34_14145	COG2816	NAD+ diphosphatase activity
IBG34_14150	COG4991	sh3 domain protein
IBG34_14155	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
IBG34_14175	COG1028	Short-chain dehydrogenase reductase Sdr
IBG34_14185	COG1505	serine-type exopeptidase activity
IBG34_14190	COG3174	membrane
IBG34_14195	COG0110	maltose O-acetyltransferase activity
IBG34_14205	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IBG34_14205	COG1263	PTS System
IBG34_14215	COG0642	Histidine kinase
IBG34_14240	COG1942	4-Oxalocrotonate Tautomerase
IBG34_14255	COG0165	Argininosuccinate lyase
IBG34_14265	COG0137	argininosuccinate synthase activity
IBG34_14275	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
IBG34_14280	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
IBG34_14290	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
IBG34_14340	COG0583	DNA-binding transcription factor activity
IBG34_14345	COG1380	Effector of murein hydrolase LrgA
IBG34_14350	COG1346	cytolysis
IBG34_14360	COG0626	cystathionine gamma-synthase activity
IBG34_14375	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IBG34_14380	COG0814	amino acid
IBG34_14390	COG0494	nUDIX hydrolase
IBG34_14395	COG1011	Hydrolase
IBG34_14400	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
IBG34_14415	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
IBG34_14425	COG3156	type II secretion system protein K
IBG34_14430	COG4795	General secretion pathway protein
IBG34_14435	COG2165	general secretion pathway protein
IBG34_14445	COG2165	general secretion pathway protein
IBG34_14450	COG1459	type II secretion system
IBG34_14455	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
IBG34_14460	COG1450	Type ii and iii secretion system protein
IBG34_14465	COG3031	protein transport across the cell outer membrane
IBG34_14475	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
IBG34_14480	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
IBG34_14500	COG3133	Outer membrane lipoprotein
IBG34_14505	COG3025	triphosphatase activity
IBG34_14510	COG1392	Phosphate transport regulator
IBG34_14515	COG0306	phosphate transporter
IBG34_14520	COG0617	tRNA 3'-terminal CCA addition
IBG34_14525	COG3267	Type II secretory pathway component ExeA
IBG34_14525	COG3409	Peptidoglycan-binding domain 1 protein
IBG34_14540	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
IBG34_14565	COG3009	Protein conserved in bacteria
IBG34_14570	COG3008	intermembrane lipid transfer
IBG34_14570	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
IBG34_14575	COG2995	paraquat-inducible protein a
IBG34_14585	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IBG34_14590	COG4251	negative regulation of phosphorylation
IBG34_14590	COG2203	Gaf domain
IBG34_14590	COG3706	GGDEF domain
IBG34_14590	COG5001	Diguanylate cyclase
IBG34_14595	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IBG34_14600	COG2813	Specifically methylates the guanine in position
IBG34_14610	COG0297	glycogen (starch) synthase activity
IBG34_14640	COG1757	Na H antiporter
IBG34_14645	COG0583	DNA-binding transcription factor activity
IBG34_14650	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
IBG34_14655	COG3842	ATPase activity
IBG34_14660	COG1176	ABC-type spermidine putrescine transport system, permease component I
IBG34_14665	COG1177	transmembrane transport
IBG34_14670	COG1012	belongs to the aldehyde dehydrogenase family
IBG34_14675	COG0109	protoheme IX farnesyltransferase activity
IBG34_14680	COG1612	heme a metabolic process
IBG34_14705	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
IBG34_14715	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
IBG34_14720	COG1444	tRNA N-acetyltransferase activity
IBG34_14740	COG1803	Methylglyoxal synthase
IBG34_14755	COG0252	asparaginase activity
IBG34_14765	COG1609	Transcriptional regulator
IBG34_14775	COG1940	carbohydrate kinase activity
IBG34_14780	COG1447	Phosphotransferase system cellobiose-specific component IIA
IBG34_14795	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IBG34_14810	COG1609	Transcriptional regulator
IBG34_14815	COG1263	PTS System
IBG34_14815	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IBG34_14820	COG0366	Alpha amylase catalytic
IBG34_14825	COG0110	maltose O-acetyltransferase activity
IBG34_14830	COG1522	sequence-specific DNA binding
IBG34_14835	COG5006	permease, DMT superfamily
IBG34_14885	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
IBG34_14900	COG0477	Major facilitator Superfamily
IBG34_14905	COG0523	cobalamin synthesis protein
IBG34_14915	COG1280	lysine exporter protein (LysE YggA)
IBG34_14925	COG0583	DNA-binding transcription factor activity
IBG34_14935	COG2200	EAL domain
IBG34_14940	COG2200	EAL domain
IBG34_14945	COG1049	propionate catabolic process, 2-methylcitrate cycle
IBG34_14955	COG0840	transmembrane signaling receptor activity
IBG34_14960	COG0840	transmembrane signaling receptor activity
IBG34_14965	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
IBG34_14970	COG0508	dehydrogenase complex catalyzes the overall conversion of
IBG34_14975	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
IBG34_14980	COG2186	Transcriptional regulator
IBG34_15025	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
IBG34_15030	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
IBG34_15035	COG0494	nUDIX hydrolase
IBG34_15050	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
IBG34_15055	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
IBG34_15060	COG0849	cell division
IBG34_15065	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
IBG34_15075	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
IBG34_15080	COG0772	Belongs to the SEDS family
IBG34_15085	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
IBG34_15090	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
IBG34_15095	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
IBG34_15100	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
IBG34_15105	COG0768	penicillin binding
IBG34_15110	COG3116	cell division
IBG34_15115	COG0275	rRNA processing
IBG34_15120	COG2001	Belongs to the MraZ family
IBG34_15130	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
IBG34_15135	COG3107	peptidoglycan biosynthetic process
IBG34_15140	COG0792	nuclease activity
IBG34_15145	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
IBG34_15150	COG2823	Periplasmic or secreted lipoprotein
IBG34_15155	COG2969	positive regulation of protein catabolic process
IBG34_15160	COG0625	glutathione transferase activity
IBG34_15165	COG2857	Cytochrome c1
IBG34_15170	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
IBG34_15175	COG0723	plastoquinol--plastocyanin reductase activity
IBG34_15180	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
IBG34_15185	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
IBG34_15190	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
IBG34_15200	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
IBG34_15205	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
IBG34_15235	COG3964	amidohydrolase
IBG34_15250	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
IBG34_15250	COG3711	transcriptional antiterminator
IBG34_15255	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
IBG34_15260	COG1660	Displays ATPase and GTPase activities
IBG34_15265	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
IBG34_15280	COG1137	ATPase activity
IBG34_15285	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
IBG34_15290	COG3117	lipopolysaccharide transmembrane transporter activity
IBG34_15295	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
IBG34_15300	COG0517	IMP dehydrogenase activity
IBG34_15300	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
IBG34_15305	COG1127	ABC transporter
IBG34_15310	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
IBG34_15315	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
IBG34_15320	COG2854	intermembrane phospholipid transfer
IBG34_15330	COG5007	Belongs to the BolA IbaG family
IBG34_15335	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
IBG34_15345	COG0312	modulator of DNA gyrase
IBG34_15350	COG3028	Belongs to the UPF0307 family
IBG34_15360	COG2926	Belongs to the UPF0265 family
IBG34_15390	COG1396	sequence-specific DNA binding
IBG34_15395	COG3135	benzoate transporter
IBG34_15425	COG3047	cAMP biosynthetic process
IBG34_15430	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
IBG34_15445	COG1494	fructose-1,6-bisphosphatase
IBG34_15480	COG3932	Exopolysaccharide synthesis, ExoD
IBG34_15505	COG1943	Transposase
IBG34_15510	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
IBG34_15515	COG2022	thiamine diphosphate biosynthetic process
IBG34_15525	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
IBG34_15530	COG0352	thiamine-phosphate diphosphorylase activity
IBG34_15535	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
IBG34_15575	COG0745	RESPONSE REGULATOR receiver
IBG34_15615	COG0582	viral genome integration into host DNA
IBG34_15655	COG3171	Protein conserved in bacteria
IBG34_15670	COG1196	nuclear chromosome segregation
IBG34_15690	COG2321	neutral zinc metallopeptidase
IBG34_15700	COG0477	Major facilitator Superfamily
IBG34_15720	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
IBG34_15730	COG1530	ribonuclease E activity
IBG34_15735	COG0424	maF-like protein
IBG34_15740	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
IBG34_15745	COG1792	Involved in formation and maintenance of cell shape
IBG34_15750	COG1077	Cell shape determining protein MreB Mrl
IBG34_15800	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
IBG34_15855	COG0387	Pfam Sodium calcium exchanger
IBG34_15860	COG2986	histidine ammonia-lyase
IBG34_15865	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
IBG34_15870	COG0010	Belongs to the arginase family
IBG34_15880	COG2188	Transcriptional regulator
IBG34_15885	COG0288	reversible hydration of carbon dioxide
IBG34_15895	COG2177	Part of the ABC transporter FtsEX involved in
IBG34_15900	COG2884	Cell division ATP-binding protein ftsE
IBG34_15905	COG0552	protein localization to endoplasmic reticulum
IBG34_15910	COG0742	ribosomal rna small subunit methyltransferase
IBG34_15935	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IBG34_15945	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
IBG34_15955	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
IBG34_15965	COG2095	MarC family integral membrane protein
IBG34_15975	COG1301	dicarboxylic acid transport
IBG34_16000	COG3714	YhhN family
IBG34_16020	COG1770	oligopeptidase
IBG34_16035	COG4221	oxidoreductase activity
IBG34_16040	COG0583	DNA-binding transcription factor activity
IBG34_16045	COG2249	NAD(P)H dehydrogenase (quinone) activity
IBG34_16065	COG4584	PFAM Integrase catalytic
IBG34_16070	COG1484	DNA-dependent DNA replication
IBG34_16105	COG0203	ribosomal protein L17
IBG34_16110	COG0202	RNA polymerase activity
IBG34_16115	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
IBG34_16120	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
IBG34_16125	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
IBG34_16130	COG0257	Belongs to the bacterial ribosomal protein bL36 family
IBG34_16135	COG0201	protein transport
IBG34_16140	COG0200	Binds to the 23S rRNA
IBG34_16145	COG1841	ribosomal large subunit assembly
IBG34_16150	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
IBG34_16155	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
IBG34_16160	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
IBG34_16165	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
IBG34_16170	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
IBG34_16175	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
IBG34_16180	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
IBG34_16185	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
IBG34_16190	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
IBG34_16195	COG0255	Belongs to the universal ribosomal protein uL29 family
IBG34_16200	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
IBG34_16205	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
IBG34_16210	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
IBG34_16215	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
IBG34_16220	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
IBG34_16225	COG0089	rRNA binding
IBG34_16230	COG0088	Forms part of the polypeptide exit tunnel
IBG34_16235	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
IBG34_16240	COG0051	transcription antitermination factor activity, RNA binding
IBG34_16250	COG2205	protein histidine kinase activity
IBG34_16265	COG2183	response to ionizing radiation
IBG34_16290	COG1040	competence protein
IBG34_16295	COG0316	Belongs to the HesB IscA family
IBG34_16295	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
IBG34_16300	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
IBG34_16305	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
IBG34_16310	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IBG34_16315	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
IBG34_16320	COG4942	peptidase
IBG34_16330	COG1609	Transcriptional regulator
IBG34_16345	COG0800	Aldolase
IBG34_16350	COG0129	dihydroxy-acid dehydratase activity
IBG34_16355	COG3265	gluconokinase activity
IBG34_16360	COG2610	gluconate transmembrane transporter activity
IBG34_16370	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
IBG34_16380	COG0456	acetyltransferase
IBG34_16390	COG1490	D-aminoacyl-tRNA deacylase activity
IBG34_16395	COG1295	ribonuclease BN
IBG34_16400	COG1295	ribonuclease BN
IBG34_16405	COG1217	gtp-binding protein TYPA
IBG34_16410	COG0174	glutamine synthetase
IBG34_16420	COG3852	Histidine kinase
IBG34_16430	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
IBG34_16435	COG0635	Involved in the biosynthesis of porphyrin-containing compound
IBG34_16445	COG3078	GTPase activator activity
IBG34_16455	COG0218	Necessary for normal cell division and for the maintenance of normal septation
IBG34_16460	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
IBG34_16465	COG0408	coproporphyrinogen oxidase activity
IBG34_16470	COG0009	L-threonylcarbamoyladenylate synthase
IBG34_16475	COG0551	DNA topoisomerase type I activity
IBG34_16480	COG2922	Belongs to the Smg family
IBG34_16495	COG0242	peptide deformylase activity
IBG34_16500	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
IBG34_16515	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
IBG34_16540	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IBG34_16550	COG0518	GMP synthase (glutamine-hydrolyzing) activity
IBG34_16550	COG0519	Catalyzes the synthesis of GMP from XMP
IBG34_16560	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
IBG34_16565	COG1396	sequence-specific DNA binding
IBG34_16580	COG2962	Rard protein
IBG34_16595	COG2391	methyltransferase activity
IBG34_16600	COG1280	lysine exporter protein (LysE YggA)
IBG34_16605	COG0583	DNA-binding transcription factor activity
IBG34_16645	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
IBG34_16670	COG2823	Periplasmic or secreted lipoprotein
IBG34_16685	COG0583	DNA-binding transcription factor activity
IBG34_16690	COG1943	Transposase
IBG34_16710	COG5433	transposase activity
IBG34_16715	COG3385	transposase activity
IBG34_16725	COG0210	DNA helicase
IBG34_16730	COG0210	DNA helicase
IBG34_16745	COG1744	ABC transporter substrate-binding protein PnrA-like
IBG34_16750	COG3845	ABC transporter
IBG34_16755	COG4603	Belongs to the binding-protein-dependent transport system permease family
IBG34_16760	COG1079	Belongs to the binding-protein-dependent transport system permease family
IBG34_16765	COG0583	DNA-binding transcription factor activity
IBG34_16790	COG1262	PFAM Formylglycine-generating sulfatase enzyme
IBG34_16800	COG0583	DNA-binding transcription factor activity
IBG34_16830	COG0385	Bile acid
IBG34_16835	COG0531	amino acid
IBG34_16840	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IBG34_16845	COG0531	amino acid
IBG34_16850	COG0531	amino acid
IBG34_16855	COG2731	YhcH YjgK YiaL family protein
IBG34_16860	COG3250	beta-galactosidase activity
IBG34_16865	COG1609	Transcriptional regulator
IBG34_16905	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
IBG34_16910	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IBG34_16910	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IBG34_16915	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
IBG34_16920	COG3074	FtsZ-dependent cytokinesis
IBG34_16930	COG1045	serine acetyltransferase
IBG34_16940	COG0745	RESPONSE REGULATOR receiver
IBG34_16945	COG2205	protein histidine kinase activity
IBG34_16950	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
IBG34_16970	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
IBG34_16975	COG2937	Belongs to the GPAT DAPAT family
IBG34_16985	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
IBG34_16990	COG3161	chorismate lyase activity
IBG34_16995	COG1580	Controls the rotational direction of flagella during chemotaxis
IBG34_17010	COG0604	alcohol dehydrogenase
IBG34_17015	COG1609	Transcriptional regulator
IBG34_17065	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
IBG34_17080	COG1063	alcohol dehydrogenase
IBG34_17095	COG0210	DNA helicase
IBG34_17100	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
IBG34_17105	COG2166	iron-sulfur cluster assembly
IBG34_17110	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
IBG34_17140	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
IBG34_17145	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
IBG34_17150	COG1739	Uncharacterized protein family UPF0029
IBG34_17155	COG0006	proline dipeptidase activity
IBG34_17165	COG1024	Enoyl-CoA hydratase
IBG34_17165	COG1250	3-hydroxyacyl-CoA dehydrogenase
IBG34_17170	COG0183	Belongs to the thiolase family
IBG34_17205	COG0251	oxidation-reduction process
IBG34_17210	COG2885	chlorophyll binding
IBG34_17235	COG2818	Glycosylase
IBG34_17240	COG0752	glycyl-tRNA synthetase alpha subunit
IBG34_17245	COG0751	glycine-tRNA ligase activity
IBG34_17250	COG3385	transposase activity
IBG34_17290	COG0640	Transcriptional regulator
IBG34_17300	COG0814	amino acid
IBG34_17305	COG0814	amino acid
IBG34_17310	COG3033	Beta-eliminating lyase
IBG34_17320	COG0348	domain, Protein
IBG34_17330	COG0446	pyridine nucleotide-disulphide oxidoreductase
IBG34_17335	COG1773	rubredoxin
IBG34_17335	COG0426	domain, Protein
IBG34_17350	COG1609	Transcriptional regulator
IBG34_17390	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IBG34_17405	COG2960	long-chain fatty acid transporting porin activity
IBG34_17415	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
IBG34_17430	COG3118	belongs to the thioredoxin family
IBG34_17435	COG0513	Belongs to the DEAD box helicase family
IBG34_17440	COG0248	Ppx GppA phosphatase
IBG34_17450	COG0742	ribosomal rna small subunit methyltransferase
IBG34_17470	COG0084	hydrolase, TatD family'
IBG34_17475	COG0805	protein transport
IBG34_17480	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
IBG34_17485	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
IBG34_17490	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
IBG34_17495	COG3165	ubiquinone biosynthetic process from chorismate
IBG34_17500	COG2226	methyltransferase
IBG34_17505	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
IBG34_17510	COG0402	S-adenosylhomocysteine deaminase activity
IBG34_17550	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
IBG34_17555	COG0848	biopolymer transport protein
IBG34_17560	COG0811	peptide transport
IBG34_17565	COG0811	peptide transport
IBG34_17575	COG2771	luxR family
IBG34_17590	COG1349	DNA-binding transcription factor activity
IBG34_17600	COG1028	Short-chain dehydrogenase reductase Sdr
IBG34_17635	COG0166	Belongs to the GPI family
IBG34_17640	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IBG34_17655	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IBG34_17730	COG1349	DNA-binding transcription factor activity
IBG34_17735	COG0745	RESPONSE REGULATOR receiver
IBG34_17740	COG2205	protein histidine kinase activity
IBG34_17750	COG4452	Inner membrane protein CreD
IBG34_17755	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
IBG34_17760	COG0355	proton-transporting ATP synthase activity, rotational mechanism
IBG34_17765	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
IBG34_17770	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
IBG34_17775	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
IBG34_17780	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
IBG34_17785	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
IBG34_17795	COG0356	it plays a direct role in the translocation of protons across the membrane
IBG34_17805	COG1475	DNA binding
IBG34_17810	COG1192	Involved in chromosome partitioning
IBG34_17815	COG0357	Ribosomal RNA small subunit methyltransferase G
IBG34_17820	COG0445	tRNA wobble uridine modification
IBG34_17825	COG0716	FMN binding
IBG34_17830	COG4774	siderophore transport
IBG34_17835	COG4615	Cyclic peptide transporter
IBG34_17840	COG1120	ATPase activity
IBG34_17845	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
IBG34_17855	COG3550	peptidyl-serine autophosphorylation
IBG34_17945	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
IBG34_17990	COG3344	reverse transcriptase
IBG34_17995	COG3385	transposase activity
IBG34_18035	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
IBG34_18045	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
IBG34_18050	COG0732	type I restriction modification DNA specificity domain
IBG34_18080	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
IBG34_18100	COG4974	Belongs to the 'phage' integrase family
IBG34_18105	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
IBG34_18110	COG0706	membrane insertase activity
IBG34_18115	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
IBG34_18120	COG0594	ribonuclease P activity
IBG34_18125	COG0230	Belongs to the bacterial ribosomal protein bL34 family
IBG34_18130	COG1126	abc transporter atp-binding protein
IBG34_18145	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
IBG34_18150	COG0592	DNA-directed DNA polymerase activity
IBG34_18160	COG0187	DNA topoisomerase II activity
IBG34_18170	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
IBG34_18175	COG0071	Belongs to the small heat shock protein (HSP20) family
IBG34_18180	COG0071	Belongs to the small heat shock protein (HSP20) family
IBG34_18200	COG2814	Major facilitator Superfamily
IBG34_18205	COG0745	RESPONSE REGULATOR receiver
IBG34_18260	COG1484	DNA-dependent DNA replication
IBG34_18265	COG4584	PFAM Integrase catalytic
IBG34_18290	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
IBG34_18295	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IBG34_18295	COG4191	Histidine kinase
IBG34_18300	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IBG34_18305	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IBG34_18310	COG1309	transcriptional regulator
IBG34_18345	COG0561	phosphatase activity
IBG34_18350	COG2267	carboxylic ester hydrolase activity
IBG34_18360	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IBG34_18365	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
IBG34_18370	COG1758	RNA polymerase activity
IBG34_18380	COG0859	PFAM glycosyl transferase family 9
IBG34_18385	COG3642	lipopolysaccharide core region biosynthetic process
IBG34_18425	COG0589	response to stress
IBG34_18430	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
IBG34_18435	COG3706	GGDEF domain
IBG34_18440	COG1528	Iron-storage protein
IBG34_18445	COG2081	HI0933 family
IBG34_18450	COG2223	nitrite transmembrane transporter activity
IBG34_18460	COG3275	phosphorelay sensor kinase activity
IBG34_18465	COG3279	Response regulator of the LytR AlgR family
IBG34_18470	COG2223	nitrite transmembrane transporter activity
IBG34_18475	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
IBG34_18480	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
IBG34_18485	COG4206	TonB-dependent receptor
IBG34_18490	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
IBG34_18525	COG0045	succinate-CoA ligase (ADP-forming) activity
IBG34_18525	COG1042	CoA-binding domain protein
IBG34_18525	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
IBG34_18535	COG0583	DNA-binding transcription factor activity
IBG34_18540	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
IBG34_18545	COG0166	Belongs to the GPI family
IBG34_18550	COG0668	transmembrane transport
IBG34_18560	COG1309	transcriptional regulator
IBG34_18570	COG0756	dUTP diphosphatase activity
IBG34_18590	COG3385	transposase activity
IBG34_18640	COG1538	Outer membrane efflux protein
IBG34_18660	COG1484	DNA-dependent DNA replication
IBG34_18665	COG4584	PFAM Integrase catalytic
IBG34_18705	COG0745	RESPONSE REGULATOR receiver
IBG34_18710	COG5002	protein histidine kinase activity
IBG34_18715	COG5433	transposase activity
IBG34_18730	COG4584	PFAM Integrase catalytic
IBG34_18735	COG1484	DNA-dependent DNA replication
IBG34_18775	COG2132	Multicopper oxidase
IBG34_18790	COG3039	Transposase
IBG34_18800	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
IBG34_18805	COG2003	Belongs to the UPF0758 family
IBG34_18810	COG0227	Belongs to the bacterial ribosomal protein bL28 family
IBG34_18815	COG0267	Belongs to the bacterial ribosomal protein bL33 family
IBG34_18830	COG2990	Protein conserved in bacteria
IBG34_18835	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
IBG34_18840	COG0859	PFAM glycosyl transferase family 9
IBG34_18845	COG0463	Glycosyl transferase, family 2
IBG34_18850	COG0859	PFAM glycosyl transferase family 9
IBG34_18855	COG1519	Transferase
IBG34_18865	COG3550	peptidyl-serine autophosphorylation
IBG34_18885	COG5433	transposase activity
IBG34_18905	COG1857	crispr-associated protein
IBG34_18925	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IBG34_18965	COG1561	YicC-like family, N-terminal region
IBG34_18970	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
IBG34_18975	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
IBG34_18985	COG0789	Transcriptional regulator
IBG34_18990	COG4251	negative regulation of phosphorylation
IBG34_18990	COG2203	Gaf domain
IBG34_18990	COG3706	GGDEF domain
IBG34_18990	COG5001	Diguanylate cyclase
IBG34_18995	COG3084	Protein conserved in bacteria
IBG34_19005	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
IBG34_19010	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
IBG34_19020	COG1335	isochorismatase
IBG34_19030	COG1683	Conserved Protein
IBG34_19035	COG0204	Acyl-transferase
IBG34_19040	COG0204	Acyl-transferase
IBG34_19045	COG0606	chelatase, subunit chli
IBG34_19055	COG3978	acetolactate synthase activity
IBG34_19080	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
IBG34_19085	COG0254	rRNA binding
IBG34_19095	COG0281	malic enzyme
IBG34_19105	COG2205	protein histidine kinase activity
IBG34_19110	COG0745	RESPONSE REGULATOR receiver
IBG34_19115	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
IBG34_19145	COG0443	Heat shock 70 kDa protein
IBG34_19150	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IBG34_19155	COG3045	CreA protein
IBG34_19175	COG0174	glutamine synthetase
IBG34_19195	COG3842	ATPase activity
IBG34_19200	COG1176	ABC-type spermidine putrescine transport system, permease component I
IBG34_19205	COG1177	transmembrane transport
IBG34_19210	COG2258	MOSC domain
IBG34_19225	COG2050	protein possibly involved in aromatic compounds catabolism
IBG34_19240	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
IBG34_19250	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
IBG34_19255	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
IBG34_19260	COG2239	Acts as a magnesium transporter
IBG34_19270	COG2116	formate transmembrane transporter activity
IBG34_19280	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
IBG34_19290	COG0842	Transport permease protein
IBG34_19295	COG1131	(ABC) transporter
IBG34_19300	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IBG34_19315	COG0477	Major facilitator Superfamily
IBG34_19320	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
IBG34_19325	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
IBG34_19345	COG1595	DNA-templated transcription, initiation
IBG34_19355	COG1968	undecaprenyl-diphosphatase activity
IBG34_19365	COG2017	converts alpha-aldose to the beta-anomer
IBG34_19370	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
IBG34_19385	COG1609	Transcriptional regulator
IBG34_19405	COG4211	Belongs to the binding-protein-dependent transport system permease family
IBG34_19435	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
IBG34_19440	COG1288	antiporter activity
IBG34_19445	COG1438	arginine binding
IBG34_19450	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
IBG34_19455	COG0540	Belongs to the ATCase OTCase family
IBG34_19485	COG1979	alcohol dehydrogenase
IBG34_19495	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
IBG34_19500	COG3681	Belongs to the UPF0597 family
IBG34_19510	COG0446	pyridine nucleotide-disulphide oxidoreductase
IBG34_19515	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IBG34_19520	COG0564	pseudouridine synthase activity
IBG34_19530	COG0542	response to heat
IBG34_19540	COG2863	cytochrome
IBG34_19550	COG2502	aspartate--ammonia ligase
IBG34_19555	COG1522	sequence-specific DNA binding
IBG34_19565	COG5413	integral membrane protein
IBG34_19570	COG0516	GMP reductase activity
IBG34_19570	COG0517	IMP dehydrogenase activity
IBG34_19575	COG1028	Short-chain dehydrogenase reductase Sdr
IBG34_19590	COG2205	protein histidine kinase activity
IBG34_19600	COG2204	response regulator
IBG34_19610	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
IBG34_19650	COG3005	denitrification pathway
IBG34_19660	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
IBG34_19665	COG0569	domain protein
IBG34_19670	COG0812	UDP-N-acetylmuramate dehydrogenase activity
IBG34_19695	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
IBG34_19710	COG0250	Participates in transcription elongation, termination and antitermination
IBG34_19715	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
IBG34_19720	COG0081	regulation of translation
IBG34_19725	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
IBG34_19730	COG0222	ribosome binding
IBG34_19735	COG0085	RNA polymerase activity
IBG34_19740	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
IBG34_19745	COG2964	Protein conserved in bacteria
IBG34_19765	COG2168	tRNA wobble position uridine thiolation
IBG34_19770	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
IBG34_19775	COG0049	tRNA binding
IBG34_19780	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
IBG34_19785	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
IBG34_19790	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
IBG34_19830	COG1538	Outer membrane efflux protein
IBG34_19845	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IBG34_19865	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
IBG34_19880	COG0789	Transcriptional regulator
IBG34_19885	COG3039	Transposase
IBG34_19890	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
IBG34_19895	COG2252	PERMEase
IBG34_19900	COG2376	Dihydroxyacetone kinase
IBG34_19905	COG1461	Dihydroxyacetone kinase
IBG34_19910	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
IBG34_19910	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
IBG34_19910	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
IBG34_19915	COG3284	Transcriptional regulator
IBG34_19925	COG2957	Belongs to the agmatine deiminase family
IBG34_19945	COG0628	permease
IBG34_19970	COG0753	catalase activity
IBG34_19975	COG1247	-acetyltransferase
IBG34_19980	COG2207	Transcriptional regulator
IBG34_20010	COG3842	ATPase activity
IBG34_20020	COG1176	ABC-type spermidine putrescine transport system, permease component I
IBG34_20045	COG0583	DNA-binding transcription factor activity
IBG34_20055	COG1741	Belongs to the pirin family
IBG34_20060	COG2259	Doxx family
IBG34_20070	COG1074	ATP-dependent DNA helicase activity
IBG34_20085	COG3385	transposase activity
IBG34_20090	COG0346	lactoylglutathione lyase activity
IBG34_20100	COG0004	ammonium transporteR
IBG34_20105	COG0347	Belongs to the P(II) protein family
IBG34_20110	COG3706	GGDEF domain
IBG34_20125	COG2197	response regulator
IBG34_20145	COG1278	Cold shock
IBG34_20180	COG3071	HemY protein
IBG34_20185	COG2959	enzyme of heme biosynthesis
IBG34_20195	COG0181	hydroxymethylbilane synthase activity
IBG34_20200	COG3072	Adenylate cyclase
IBG34_20205	COG0400	carboxylic ester hydrolase activity
IBG34_20210	COG1965	Belongs to the frataxin family
IBG34_20220	COG0019	diaminopimelate decarboxylase activity
IBG34_20225	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
IBG34_20250	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
IBG34_20255	COG0561	phosphatase activity
IBG34_20265	COG1988	membrane-bound metal-dependent
IBG34_20280	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
IBG34_20290	COG1522	sequence-specific DNA binding
IBG34_20295	COG1368	sulfuric ester hydrolase activity
IBG34_20310	COG1285	pathogenesis
IBG34_20330	COG4221	oxidoreductase activity
IBG34_20345	COG1979	alcohol dehydrogenase
IBG34_20355	COG2873	o-acetylhomoserine
IBG34_20385	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
IBG34_20400	COG2949	membrane
IBG34_20415	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
IBG34_20420	COG0596	Alpha beta hydrolase
IBG34_20425	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
IBG34_20440	COG1966	Carbon starvation protein
IBG34_20445	COG2879	small protein
IBG34_20450	COG0523	cobalamin synthesis protein
IBG34_20475	COG0513	Belongs to the DEAD box helicase family
IBG34_20485	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
IBG34_20490	COG5492	domain, Protein
IBG34_20490	COG4932	domain protein
IBG34_20495	COG1671	Belongs to the UPF0178 family
IBG34_20520	COG3722	fumarate hydratase activity
IBG34_20525	COG0246	Mannitol dehydrogenase
IBG34_20530	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
IBG34_20530	COG2213	PTS system mannitol-specific
IBG34_20535	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
IBG34_20550	COG2771	luxR family
IBG34_20565	COG1560	Kdo2-lipid A biosynthetic process
IBG34_20575	COG1538	Outer membrane efflux protein
IBG34_20580	COG0494	nUDIX hydrolase
IBG34_20585	COG3151	Protein conserved in bacteria
IBG34_20595	COG3150	esterase
IBG34_20600	COG1051	belongs to the nudix hydrolase family
IBG34_20615	COG1566	PFAM secretion protein HlyD family protein
IBG34_20620	COG1289	transmembrane transporter activity
IBG34_20650	COG0456	acetyltransferase
IBG34_20695	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
IBG34_20715	COG0204	Acyl-transferase
IBG34_20720	COG1842	Phage shock protein A
IBG34_20735	COG2827	Endonuclease containing a URI domain
IBG34_20740	COG2962	Rard protein
IBG34_20745	COG1573	uracil-dna glycosylase
IBG34_20760	COG1108	ABC-type Mn2 Zn2 transport systems permease components
IBG34_20765	COG1121	(ABC) transporter
IBG34_20770	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
IBG34_20790	COG0739	heme binding
IBG34_20800	COG3068	Protein conserved in bacteria
IBG34_20820	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
IBG34_20835	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
IBG34_20840	COG2137	regulation of response to DNA damage stimulus
IBG34_20845	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
IBG34_20850	COG0527	aspartate kinase activity
IBG34_20855	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
IBG34_20890	COG1686	Belongs to the peptidase S11 family
IBG34_20895	COG0586	Pfam SNARE associated Golgi protein
IBG34_20900	COG1253	flavin adenine dinucleotide binding
IBG34_20910	COG2927	DNA polymerase III (CHI subunit)
IBG34_20915	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
IBG34_20920	COG0795	lipopolysaccharide-transporting ATPase activity
IBG34_20925	COG0795	lipopolysaccharide-transporting ATPase activity
IBG34_20940	COG0582	viral genome integration into host DNA
IBG34_20955	COG4584	PFAM Integrase catalytic
IBG34_20960	COG1484	DNA-dependent DNA replication
IBG34_20975	COG1160	GTP binding
IBG34_21025	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
IBG34_21040	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
IBG34_21055	COG0004	ammonium transporteR
IBG34_21060	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
IBG34_21080	COG0084	hydrolase, TatD family'
IBG34_21085	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
IBG34_21095	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
IBG34_21100	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
IBG34_21105	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
IBG34_21120	COG3064	Membrane
IBG34_21130	COG0560	Phosphoserine phosphatase
IBG34_21145	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
IBG34_21155	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
IBG34_21160	COG0776	regulation of translation
IBG34_21175	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IBG34_21180	COG0735	belongs to the Fur family
IBG34_21205	COG0513	Belongs to the DEAD box helicase family
IBG34_21210	COG3022	response to hydroperoxide
IBG34_21225	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
IBG34_21230	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
IBG34_21235	COG0762	integral membrane protein
IBG34_21240	COG1872	DUF167
IBG34_21260	COG3112	Uncharacterised protein family (UPF0231)
IBG34_21270	COG3835	regulator
IBG34_21275	COG2610	gluconate transmembrane transporter activity
IBG34_21280	COG1929	Belongs to the glycerate kinase type-1 family
IBG34_21295	COG0583	DNA-binding transcription factor activity
IBG34_21300	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
IBG34_21315	COG0347	Belongs to the P(II) protein family
IBG34_21335	COG2837	iron assimilation
IBG34_21340	COG1438	arginine binding
IBG34_21345	COG1126	abc transporter atp-binding protein
IBG34_21350	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IBG34_21355	COG4215	(ABC) transporter
IBG34_21360	COG4160	amino acid transport
IBG34_21365	COG0039	L-malate dehydrogenase activity
IBG34_21370	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
IBG34_21375	COG1017	nitric oxide dioxygenase activity
IBG34_21375	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
IBG34_21390	COG4137	Cytochrome C assembly protein
IBG34_21395	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
IBG34_21400	COG0228	four-way junction DNA binding
IBG34_21405	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
IBG34_21410	COG0336	Belongs to the RNA methyltransferase TrmD family
IBG34_21415	COG0335	large ribosomal subunit rRNA binding
IBG34_21440	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
IBG34_21445	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
IBG34_21450	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
IBG34_21460	COG0583	DNA-binding transcription factor activity
IBG34_21465	COG0640	Transcriptional regulator
IBG34_21470	COG0268	Binds directly to 16S ribosomal RNA
IBG34_21475	COG0728	peptidoglycan biosynthetic process
IBG34_21480	COG0196	riboflavin kinase activity
IBG34_21485	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
IBG34_21490	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
IBG34_21495	COG1047	Peptidyl-prolyl cis-trans
IBG34_21500	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
IBG34_21530	COG5433	transposase activity
IBG34_21550	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
IBG34_21550	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
IBG34_21565	COG1854	S-ribosylhomocysteine lyase activity
IBG34_21570	COG3706	GGDEF domain
IBG34_21575	COG0557	exoribonuclease II activity
IBG34_21580	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IBG34_21590	COG2153	protein acetylation
IBG34_21605	COG1914	H( )-stimulated, divalent metal cation uptake system
IBG34_21610	COG0360	Binds together with S18 to 16S ribosomal RNA
IBG34_21615	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
IBG34_21620	COG0359	binds to the 23S rRNA
IBG34_21660	COG1238	metal cluster binding
IBG34_21665	COG0612	Peptidase, M16
IBG34_21670	COG2918	glutathione biosynthetic process
IBG34_21675	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
IBG34_21680	COG1027	Aspartate ammonia-lyase
IBG34_21685	COG3030	protein affecting phage T7 exclusion by the F plasmid
IBG34_21690	COG0534	Mate efflux family protein
IBG34_21695	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
IBG34_21700	COG0459	protein refolding
IBG34_21720	COG0564	pseudouridine synthase activity
IBG34_21725	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
IBG34_21760	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
IBG34_21770	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
IBG34_21775	COG4208	sulfate ABC transporter
IBG34_21780	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
IBG34_21785	COG0583	DNA-binding transcription factor activity
IBG34_21795	COG0840	transmembrane signaling receptor activity
IBG34_21825	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
IBG34_21840	COG1448	Aminotransferase
IBG34_21855	COG1192	Involved in chromosome partitioning
IBG34_21865	COG1215	transferase activity, transferring glycosyl groups
IBG34_21875	COG3118	belongs to the thioredoxin family
IBG34_21875	COG0457	Tetratricopeptide repeat
IBG34_21880	COG3118	belongs to the thioredoxin family
IBG34_21880	COG0457	Tetratricopeptide repeat
IBG34_21915	COG0513	Belongs to the DEAD box helicase family
IBG34_21925	COG0840	transmembrane signaling receptor activity
IBG34_21935	COG4166	transmembrane transport
IBG34_21945	COG0110	maltose O-acetyltransferase activity
IBG34_21955	COG1024	Enoyl-CoA hydratase
IBG34_21970	COG4221	oxidoreductase activity
IBG34_21975	COG0442	prolyl-tRNA aminoacylation
IBG34_21980	COG0840	transmembrane signaling receptor activity
IBG34_21985	COG0632	four-way junction helicase activity
IBG34_21990	COG2255	four-way junction helicase activity
IBG34_21995	COG1271	oxidase subunit
IBG34_22000	COG1294	oxidase, subunit
IBG34_22005	COG4890	Cyd operon protein YbgT
IBG34_22010	COG3790	cyd operon protein YbgE
IBG34_22015	COG0824	Thioesterase
IBG34_22020	COG0811	peptide transport
IBG34_22035	COG0823	Involved in the tonB-independent uptake of proteins
IBG34_22040	COG2885	chlorophyll binding
IBG34_22045	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
IBG34_22120	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
IBG34_22130	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
IBG34_22135	COG1640	4-alpha-glucanotransferase
IBG34_22140	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
IBG34_22165	COG2130	NADP-dependent
IBG34_22170	COG1846	Transcriptional regulator
IBG34_22200	COG0561	phosphatase activity
IBG34_22215	COG0733	neurotransmitter:sodium symporter activity
IBG34_22220	COG0733	neurotransmitter:sodium symporter activity
IBG34_22230	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IBG34_22245	COG1794	racemase activity, acting on amino acids and derivatives
IBG34_22255	COG1022	Amp-dependent synthetase and ligase
IBG34_22265	COG0456	acetyltransferase
IBG34_22280	COG2425	protein containing a von Willebrand factor type A (vWA) domain
IBG34_22295	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
IBG34_22305	COG1902	pentaerythritol trinitrate reductase activity
IBG34_22325	COG2957	Belongs to the agmatine deiminase family
IBG34_22330	COG0154	amidase activity
IBG34_22375	COG0513	Belongs to the DEAD box helicase family
IBG34_22415	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
IBG34_22505	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
IBG34_22510	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IBG34_22520	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IBG34_22555	COG3104	oligopeptide transport
IBG34_22560	COG1210	Utp--glucose-1-phosphate uridylyltransferase
IBG34_22565	COG1555	photosystem II stabilization
IBG34_22575	COG2350	Protein conserved in bacteria
IBG34_22580	COG2917	probably involved in intracellular septation
IBG34_22590	COG1272	protein, Hemolysin III
IBG34_22595	COG0569	domain protein
IBG34_22595	COG2985	domain, Protein
IBG34_22640	COG0583	DNA-binding transcription factor activity
IBG34_22650	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
IBG34_22655	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
IBG34_22665	COG2731	YhcH YjgK YiaL family protein
IBG34_22675	COG0668	transmembrane transport
IBG34_22685	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
IBG34_22700	COG0789	Transcriptional regulator
IBG34_22735	COG0488	(ABC) transporter
IBG34_22740	COG0516	GMP reductase activity
IBG34_22740	COG0517	IMP dehydrogenase activity
IBG34_22745	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
IBG34_22750	COG0784	Response regulator, receiver
IBG34_22750	COG0835	chemotaxis
IBG34_22755	COG2755	lipolytic protein G-D-S-L family
IBG34_22770	COG1090	epimerase
IBG34_22775	COG2200	EAL domain
IBG34_22785	COG4935	Belongs to the peptidase S8 family
IBG34_22785	COG2234	aminopeptidase activity
IBG34_22790	COG0220	tRNA (guanine-N7-)-methyltransferase activity
IBG34_22795	COG3171	Protein conserved in bacteria
IBG34_22800	COG2066	Belongs to the glutaminase family
IBG34_22805	COG2897	thiosulfate sulfurtransferase activity
IBG34_22840	COG3385	transposase activity
IBG34_22855	COG0582	viral genome integration into host DNA
IBG34_22875	COG3447	MASE1 domain protein
IBG34_22875	COG5002	protein histidine kinase activity
IBG34_22875	COG5001	Diguanylate cyclase
IBG34_22880	COG4974	Belongs to the 'phage' integrase family
IBG34_22885	COG5433	transposase activity
IBG34_22915	COG0784	Response regulator, receiver
IBG34_22915	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
IBG34_22930	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
IBG34_22935	COG3300	MHYT domain
IBG34_22935	COG5001	Diguanylate cyclase
IBG34_22960	COG4628	conserved protein (DUF2132)
IBG34_22965	COG0688	phosphatidylethanolamine metabolic process
IBG34_22975	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
IBG34_23015	COG1278	Cold shock
IBG34_23030	COG0840	transmembrane signaling receptor activity
IBG34_23035	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
IBG34_23190	COG2003	Belongs to the UPF0758 family
IBG34_23225	COG4227	nucleotidyltransferase activity
IBG34_23430	COG2337	Toxic component of a toxin-antitoxin (TA) module
IBG34_23595	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
IBG34_23605	COG1484	DNA-dependent DNA replication
IBG34_23610	COG4584	PFAM Integrase catalytic
IBG34_23615	COG3093	addiction module antidote protein HigA
IBG34_23760	COG2003	Belongs to the UPF0758 family