phiA009_0003 NONE phiA009_0004 NONE phiA009_0005 2565 .. 2583 + -8.1 -5.34857 AGTATAAGATATTTA GGAGTCC ATTAG GGGCTCC TTTTATTTTATTTGA 100 42 phiA009_0006 NONE phiA009_0007 NONE phiA009_0008 NONE phiA009_0009 3865 .. 3875 + -4 -3.53012 TCTCCCATGTCCTTA CAAT GTT ATTG TTTAGGAGGAAACAA 51 10 phiA009_0010 NONE phiA009_0011 NONE phiA009_0012 4831 .. 4841 + -4 -3.87807 ACCAAGTTGATGAGT TCAA GGT TTGA TATTTTAGTTATATT 56 15 phiA009_0013 NONE phiA009_0014 5573 .. 5599 + -7.2 -4.04576 GGAAAAGTATATTGA CCTCGACTTGGT TAG ACCTTGTTGAGG TTTAGTTGTATAAAT 74 139 phiA009_0015 7045 .. 7060 + -11.8 -4.38927 CTAAAATCACCCCCA CCCCGC CTCG GCGGGG TTTATTATATACCAC 100 37 phiA009_0034 14020 .. 14035 + -6.2 -5.38497 AAATTTTTCCAGTTA TGGATT GAAA AATCCA TTTTTTCCTTTAGAT 88 269 phiA009_0060 NONE phiA009_0061 NONE phiA009_0062 29734 .. 29747 + -3.9 -2.80879 TGTGACAAAAGAATC TAAGT GTTG ACTTA CTTCTTGAGCTTGGT 47 44 phiA009_0063 NONE phiA009_0064 NONE phiA009_0065 NONE phiA009_0066 NONE phiA009_0067 NONE phiA009_0068 NONE phiA009_0069 NONE phiA009_0070 NONE phiA009_0071 NONE phiA009_0072 NONE phiA009_0073 37181 .. 37196 + -6.2 -3.11103 GTGACATTGTGGCCT TGTATG GTGA CATACA TTGAATAACTCTTTT 59 37 phiA009_0074 37903 .. 37923 + -8.4 -2.87468 ATCGAAATGGAGAGG TTCTGTTG TAGGT CAACAGAA TGTGATATAGTCCGA 68 127 phiA009_0075 38238 .. 38250 + -3.4 -3.13403 ATTAACAAAGAAGGA GACA ATTGA TGTC TATTAGTAAAGCAAA 46 53 phiA009_0076 38796 .. 38811 + -10.4 -3.19192 ACATGAAGCAGAAAA GCGGGA GAAA TCCCGC TTCAATTAAATAAAG 83 45 phiA009_0077 39706 .. 39721 + -10.4 -3.75884 ATAGATAAAAGAAAA GCCCCT GTGA AGGGGC TTAATTTATTTCAGA 87 75 phiA009_0130 81801 .. 81813 + -9.1 -2.78058 TTGTACATCACTTGT GGCTC ACA GAGCC TAATCTTAAATTGGT 72 339 phiA009_0140 NONE phiA009_0141 NONE phiA009_0142 NONE phiA009_0143 NONE phiA009_0144 NONE phiA009_0145 NONE phiA009_0146 NONE phiA009_0147 NONE phiA009_0148 NONE phiA009_0149 NONE dut NONE phiA009_0151 NONE phiA009_0152 NONE phiA009_0153 NONE phiA009_0154 93027 .. 93040 + -3.9 -3.5782 TCCCATGTAAAGATT TTAAG AAAG CTTAA TTAGTTTAATAACTT 53 12 phiA009_0155 NONE phiA009_0156 93683 .. 93702 + -9.3 -4.08557 GTAAATAATACTGAT GAGCCTC TTAACC GAGGCTC TTGTTGTTTAGGAGG 85 47 phiA009_0157 NONE phiA009_0158 NONE phiA009_0159 NONE phiA009_0160 NONE phiA009_0161 NONE phiA009_0162 NONE phiA009_0163 NONE phiA009_0164 NONE phiA009_0165 NONE phiA009_0166 NONE phiA009_0167 NONE phiA009_0168 NONE phiA009_0169 NONE phiA009_0170 99596 .. 99618 + -3.4 -4.0127 AAGAATAACCATTAA GCCGCTTGA CTATAA TC-GGCGGC TTTAATTATAAGTAT 56 39 phiA009_0171 NONE phiA009_0172 NONE phiA009_0173 NONE phiA009_0174 NONE phiA009_0175 102791 .. 102804 + -5.3 -2.82516 GTAATCCTTGACTTT CTGAT TTAA ATCAG TATAATCATACAGAC 53 42 phiA009_0176 NONE phiA009_0177 NONE phiA009_0178 NONE phiA009_0179 NONE phiA009_0180 NONE nrdA 106006 .. 106021 + -4.8 -3.06501 AAACTGATGCAGCCT TATACA GCAA TGTATA TTGAATAACCGTGTG 52 39 nrdA 107222 .. 107242 + -9 -3.14848 AATTAAATTTTATAA GGCACTGT CCCGT GCAGTGCC ATTTTACTAAGGAGA 74 39 nrdB 108362 .. 108375 + -3.8 -3.58914 CTAAGACTTGACAAA GCAC AAGGAA GTGC TTATAATTAATTTAA 53 37 phiA009_0184 NONE phiA009_0185 109055 .. 109073 + -6 -3.29325 GGAGGGGAATGCAAC CCTCTTTT AAA ATAAGAGG TATTAATTGTGGGAC 59 98 nrdD NONE nrdG 111641 .. 111657 + -5.2 -3.77666 AAGGTGTGGATTTTT GATTCA CCTAT TGAATC TTTAAGTTCAATCTG 61 24 phiA009_0188 111902 .. 111921 + -5 -3.21934 CCTATTAAACACATG GCTTGTTA ATTC TGGCAAGC ATTTTATAAAACAAA 54 52 phiA009_0189 NONE phiA009_0190 NONE phiA009_0191 NONE phiA009_0192 NONE phiA009_0193 NONE phiA009_0194 NONE phiA009_0195 114419 .. 114441 + -2.7 -2.54166 CAATTCCTTTTTAAA GAATAGTGT TAAAC GCACAATTC CATTTTAATTAAACA 0 27 phiA009_0139 NONE phiA009_0138 NONE phiA009_0137 NONE phiA009_0136 NONE phiA009_0135 84169 .. 84197 - -8.2 -4.48221 CACTAACTGATAAAA CCCCATTCTGCC ACAAG AGCAAAATAGGG TTAATAGTTATTTGA 85 96 phiA009_0134 NONE phiA009_0133 NONE phiA009_0132 NONE phiA009_0131 81505 .. 81529 - -8.6 -5.23292 TTAGATAAAAGAAAA GGGCCAACACC CGAA GATGT-GGCCC AGTATGATTAAAGAG 95 321 phiA009_0129 80147 .. 80184 - -2.9 -3.83188 TATATTCATAAAATA TTCAAGGTTCAACAG CAAATAAC CTATCAAACCTTAAA ATACTCATAGAAAGC 52 191 phiA009_0128 79857 .. 79878 - -3.7 -3.61468 CTCCAAGGAAATCAA GGGCTACAT TGAA ATTTAACCC TACCCTACTAGCTTA 52 59 phiA009_0127 NONE dam 77574 .. 77591 - -2.7 -3.20232 ACAACATAATACACA CCTTTAA TATT TTATAGG TTTTCACAACCAATG 44 47 phiA009_0125 NONE phiA009_0124 NONE phiA009_0123 NONE phiA009_0122 NONE phiA009_0121 NONE phiA009_0120 NONE phiA009_0119 NONE phiA009_0118 NONE phiA009_0117 74564 .. 74577 - -6.7 -3.66742 TCTATATAAACAATA GATGG TAGG CCATC ACCCCGCGATAAAGA 67 430 phiA009_0116 73928 .. 73945 - -3.5 -3.85698 CTTTTTGTGTATAAA CTAATCA TATT TGATTAA ATGTGTAGCATTGTA 54 52 phiA009_0115 NONE phiA009_0114 73167 .. 73198 - -4.5 -3.965 TCTCAAAAGCAATAA CAGCCAGATACCT TTTGAC AGATATCCAGCTA ATAATTAAATTTAAA 60 43 phiA009_0113 71817 .. 71842 - -6.1 -4.70169 CCACATGCAATAAAA GAGGTGTCAAC ATTA GTCAACCCCTC TTATTAATATTAAGT 76 93 phiA009_0112 NONE phiA009_0111 71017 .. 71032 - -6.2 -3.06501 CACATGGTTATTCAA TACACA TTAC TGTGTA AGGGCTCTGATGTTT 59 6 phiA009_0110 NONE phiA009_0109 67977 .. 67987 - -4 -3.55801 ATTAACCTCTTGAAA CTAA ACA TTAG TCGAAATTATACCAA 51 72 phiA009_0108 66940 .. 66957 - -5.5 -4.1721 ATTTACAGTGGAAAA GAGGCCA TTTC TGACCCC AATTTTAAACTTTAC 66 30 phiA009_0107 NONE phiA009_0106 NONE phiA009_0105 NONE phiA009_0104 63326 .. 63351 - -10.4 -4.60949 TATATCATAAACAAA GGCCGCCACCC TTAAC GGG-GGCAGCC TAAGAGCTTACTTAC 95 47 phiA009_0103 62852 .. 62862 - -2.6 -4.07885 TATCTGTTGCCAAAA TTAA TAA TTAA ATAGTTTTGGCCCAT 53 138 phiA009_0102 NONE phiA009_0101 NONE phiA009_0100 NONE phiA009_0099 NONE phiA009_0098 NONE phiA009_0097 58772 .. 58789 - -11.3 -2.93708 GTTGCTTAAAAAGAG GGTGCCA TTTC TGGCACC AACTACATAGCAAAC 86 68 phiA009_0096 58133 .. 58146 - -2.3 -3.8647 ACGTAGCATATCAAA CCAGT CGAG ACGGG AATTCTCTCCCACAT 50 119 phiA009_0095 57899 .. 57927 - -8.2 -4.86731 TGTTGTGAAACAAAA TAAGCCGCCACCT TTTC AGG-GGCAGCCTA AAAGCTTATCTACAA 90 42 phiA009_0094 56771 .. 56786 - -2.6 -2.93869 CATTACTGTATAAAG GAACTA TTTT TAATTC AACATTTGACCAATA 42 19 phiA009_0093 55728 .. 55741 - -3.1 -3.18681 GTTTAACGTCAGCAA GCAGA ATTT TCTAC TGACCTTTCAGCTCT 46 223 phiA009_0092 54347 .. 54364 - -7 -4.57787 ACAATATTAAATAAA GGACTG GATTAA CAGTCC TTTTAATTTAACTAG 79 49 phiA009_0091 NONE phiA009_0090 NONE phiA009_0089 52153 .. 52165 - -3.5 -3.00601 TAAATTACAACTACA TAATT AAT AATTA TTGCACTAATGTTCC 46 23 phiA009_0088 NONE phiA009_0087 NONE phiA009_0086 48344 .. 48359 - -6.8 -4.43012 ATTGTAAGATGAAAA GCCCCT GTGA AGAGGC TTTTATACTGCGCTG 78 45 phiA009_0085 NONE phiA009_0084 45970 .. 45980 - -4 -2.94099 TCTCCTTATTACATA TCAT AAG ATGA TTTATACGAGGTAAA 47 8 phiA009_0083 NONE phiA009_0082 NONE phiA009_0081 44331 .. 44347 - -4.5 -4.4296 TAAGAGATATTAAAA TAAAACA CAA TGTCTTA TATTCTTGTTTTGAT 65 112 phiA009_0080 43493 .. 43509 - -2.3 -4.44187 ACACATAAATACAAA TGTTTCA ATA TCAAACA CGAGTAAATTATTGT 57 136 phiA009_0079 42370 .. 42385 - -7.6 -3.09175 AAGGTTCACTTAAGA GGGATA TAAT TATCCC AACACAAATAGGTAA 67 56 phiA009_0078 39706 .. 39721 - -10.4 -5.24647 ATAGATAAAAGAAAA GCCCCT GTGA AGGGGC TTAATTTATTTCAGA 100 88 phiA009_0059 NONE phiA009_0058 NONE phiA009_0057 26261 .. 26278 - -7.7 -5.18371 CTCCATAAAAGAAAA GGACTAC CGAA GTAGCCC CTATAATAACATCTT 91 52 phiA009_0056 NONE phiA009_0055 NONE phiA009_0054 NONE phiA009_0053 NONE phiA009_0052 22505 .. 22523 - -8.9 -4.99043 TCTCCATAAAGAAAA GGACACT ATCAA AGTGTCC TTATAGTACCTTGCA 95 43 phiA009_0051 NONE phiA009_0050 NONE phiA009_0049 21224 .. 21240 - -2.3 -2.77701 AGTTTACGAACACCA TCAACAA TCA TTGTTTA ATCTCCTTAATTTAT 40 37 phiA009_0048 20095 .. 20110 - -8.2 -5.58522 CAGACAAAAGAAAAA GCGACC TGAA GGCCGC CATTAATACTAGCTA 100 46 phiA009_0047 19076 .. 19086 - -4.6 -2.89881 TATTGATTCTAGATA GCCC TGA GAGC GTTTAAAGGTGTGTT 49 91 phiA009_0046 NONE phiA009_0045 NONE phiA009_0044 NONE phiA009_0043 17346 .. 17356 - -2.6 -2.80929 TAATATAAATAACAG TTTA CCA TAAA ATAAACAAAAATTCA 42 222 phiA009_0042 NONE phiA009_0041 NONE phiA009_0040 16071 .. 16086 - -10.4 -5.0707 AAAGATAAAAAGAAA GCAGCC CGAA GGCTGC CTGTGTGAAGCGTAA 100 50 phiA009_0039 NONE phiA009_0038 NONE phiA009_0037 NONE phiA009_0036 NONE phiA009_0035 14395 .. 14413 - -10.3 -5.24515 AATAAATAAAGAAAA GCCAAGG ATTAA CCTTGGC AAAGGATAGTTTTTA 100 56 phiA009_0033 13207 .. 13218 - -3 -2.65815 TTCATATCCAGATTA GAAT TCAT ATTC GATCACCCCATACTC 42 11 phiA009_0032 12712 .. 12728 - -5.1 -3.62291 TTAACAGTATAAACA GCATTCT CGG AGAAGGC AAGATCTTTTATCTT 58 143 phiA009_0031 12459 .. 12477 - -3.3 -3.52909 AAAGACATATTAGAA TAAAAAT TGATC ATTTTTA GATTTCCTTTATAAA 50 23 phiA009_0030 NONE phiA009_0029 NONE phiA009_0028 11468 .. 11478 - -2.4 -4.02334 TAGCCAGATTATAAA CAGG AAA CCAG CGGCAACGGGGGCGA 53 108 phiA009_0027 11139 .. 11155 - -2.3 -4.30576 TTGCTATTAGTAAAA GACATAA TAT TTATTTC CTCTTAATTTATAAG 54 80 phiA009_0026 NONE phiA009_0025 10821 .. 10835 - -2.8 -2.86806 ATCAACTGATAATTA TTCGAT GTT AACGAA AAATGAATCTTCTGG 42 8 phiA009_0024 10465 .. 10493 - -13.3 -4.17537 TGAAATAAGTATAAA CAAAAGGGCTGCA TGT TGCAACCCTTTTA TATAAATTATTTTTA 100 46 phiA009_0023 10139 .. 10160 - -10.1 -2.60382 AATAAGTATATCAAG GGGCTCACC GTTT GGCAAGCCC TTCAAACAAAATAAT 77 74 phiA009_0022 9858 .. 9880 - -8.4 -3.61398 GTGTTTCCTTAAGAA GTAGCACCAT TAT AAGGTGCCAC AATTTAAAGATCAAC 75 46 phiA009_0021 NONE phiA009_0020 NONE phiA009_0019 NONE phiA009_0018 NONE phiA009_0017 8729 .. 8743 - -2.8 -4.13767 GCCTTTAGTTTAAAA GTCG TGTTTAT CGAC ACTCCAACCATTGTT 53 5 phiA009_0016 8402 .. 8417 - -7.5 -5.3689 ACAAACAAAAGAAAA GCGGC GCATTG GCCGC TATATCTATCAATAA 100 45