locus-tag class description KYK33_00005 PF00308 Bacterial dnaA protein KYK33_00005 PF08299 Bacterial dnaA protein helix-turn-helix KYK33_00005 PF11638 DnaA N-terminal domain KYK33_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KYK33_00010 PF02767 DNA polymerase III beta subunit, central domain KYK33_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KYK33_00015 PF02463 RecF/RecN/SMC N terminal domain KYK33_00020 PF00204 DNA gyrase B KYK33_00020 PF00986 DNA gyrase B subunit, carboxyl terminus KYK33_00020 PF18053 DNA gyrase B subunit insert domain KYK33_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_00020 PF01751 Toprim domain KYK33_00025 PF02311 AraC-like ligand binding domain KYK33_00025 PF12833 Helix-turn-helix domain KYK33_00030 PF12706 Beta-lactamase superfamily domain KYK33_00035 PF00011 Hsp20/alpha crystallin family KYK33_00040 PF00011 Hsp20/alpha crystallin family KYK33_00045 PF00155 Aminotransferase class I and II KYK33_00060 PF00072 Response regulator receiver domain KYK33_00060 PF00486 Transcriptional regulatory protein, C terminal KYK33_00065 PF13493 Domain of unknown function (DUF4118) KYK33_00065 PF13492 GAF domain KYK33_00065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_00065 PF00512 His Kinase A (phospho-acceptor) domain KYK33_00065 PF02702 Osmosensitive K+ channel His kinase sensor domain KYK33_00070 PF02669 K+-transporting ATPase, c chain KYK33_00080 PF03814 Potassium-transporting ATPase A subunit KYK33_00085 PF07992 Pyridine nucleotide-disulphide oxidoreductase KYK33_00085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KYK33_00090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_00090 PF00512 His Kinase A (phospho-acceptor) domain KYK33_00090 PF00497 Bacterial extracellular solute-binding proteins, family 3 KYK33_00095 PF01432 Peptidase family M3 KYK33_00100 PF03707 Bacterial signalling protein N terminal repeat KYK33_00100 PF00563 EAL domain KYK33_00100 PF00990 Diguanylate cyclase, GGDEF domain KYK33_00105 PF04445 Putative SAM-dependent methyltransferase KYK33_00115 PF02541 Ppx/GppA phosphatase family KYK33_00120 PF00270 DEAD/DEAH box helicase KYK33_00120 PF00271 Helicase conserved C-terminal domain KYK33_00125 PF00085 Thioredoxin KYK33_00130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KYK33_00130 PF07498 Rho termination factor, N-terminal domain KYK33_00130 PF07497 Rho termination factor, RNA-binding domain KYK33_00140 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase KYK33_00145 PF00175 Oxidoreductase NAD-binding domain KYK33_00150 PF04380 Membrane fusogenic activity KYK33_00155 PF12262 Bacterial virulence factor lipase N-terminal KYK33_00160 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease KYK33_00160 PF01694 Rhomboid family KYK33_00165 PF00581 Rhodanese-like domain KYK33_00180 PF00005 ABC transporter KYK33_00185 PF00005 ABC transporter KYK33_00185 PF12399 Branched-chain amino acid ATP-binding cassette transporter KYK33_00190 PF02653 Branched-chain amino acid transport system / permease component KYK33_00190 PF11862 Domain of unknown function (DUF3382) KYK33_00195 PF02653 Branched-chain amino acid transport system / permease component KYK33_00200 PF13458 Periplasmic binding protein KYK33_00205 PF00356 Bacterial regulatory proteins, lacI family KYK33_00210 PF00873 AcrB/AcrD/AcrF family KYK33_00215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KYK33_00220 PF00440 Bacterial regulatory proteins, tetR family KYK33_00220 PF16295 Tetracyclin repressor-like, C-terminal domain KYK33_00245 PF00224 Pyruvate kinase, barrel domain KYK33_00245 PF02887 Pyruvate kinase, alpha/beta domain KYK33_00250 PF07690 Major Facilitator Superfamily KYK33_00260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_00260 PF00672 HAMP domain KYK33_00260 PF00512 His Kinase A (phospho-acceptor) domain KYK33_00265 PF02954 Bacterial regulatory protein, Fis family KYK33_00265 PF00072 Response regulator receiver domain KYK33_00265 PF14532 Sigma-54 interaction domain KYK33_00270 PF02743 Cache domain KYK33_00270 PF00672 HAMP domain KYK33_00270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_00285 PF12146 Serine aminopeptidase, S33 KYK33_00290 PF00588 SpoU rRNA Methylase family KYK33_00290 PF12105 SpoU, rRNA methylase, C-terminal KYK33_00295 PF02824 TGS domain KYK33_00295 PF04607 Region found in RelA / SpoT proteins KYK33_00295 PF13291 ACT domain KYK33_00300 PF01192 RNA polymerase Rpb6 KYK33_00305 PF00625 Guanylate kinase KYK33_00310 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KYK33_00325 PF00892 EamA-like transporter family KYK33_00345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_00345 PF03466 LysR substrate binding domain KYK33_00350 PF00579 tRNA synthetases class I (W and Y) KYK33_00355 PF00582 Universal stress protein family KYK33_00360 PF07055 Enoyl reductase FAD binding domain KYK33_00360 PF12241 Trans-2-enoyl-CoA reductase catalytic region KYK33_00360 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KYK33_00365 PF08448 PAS fold KYK33_00365 PF00990 Diguanylate cyclase, GGDEF domain KYK33_00370 PF00210 Ferritin-like domain KYK33_00380 PF01810 LysE type translocator KYK33_00385 PF07715 TonB-dependent Receptor Plug Domain KYK33_00385 PF00593 TonB dependent receptor KYK33_00390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_00390 PF06580 Histidine kinase KYK33_00390 PF07694 5TMR of 5TMR-LYT KYK33_00395 PF00072 Response regulator receiver domain KYK33_00395 PF04397 LytTr DNA-binding domain KYK33_00400 PF07690 Major Facilitator Superfamily KYK33_00405 PF07715 TonB-dependent Receptor Plug Domain KYK33_00405 PF00593 TonB dependent receptor KYK33_00410 PF01177 Asp/Glu/Hydantoin racemase KYK33_00445 PF13607 Succinyl-CoA ligase like flavodoxin domain KYK33_00445 PF00583 Acetyltransferase (GNAT) family KYK33_00445 PF13380 CoA binding domain KYK33_00455 PF03466 LysR substrate binding domain KYK33_00455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_00460 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KYK33_00460 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KYK33_00465 PF00342 Phosphoglucose isomerase KYK33_00475 PF00403 Heavy-metal-associated domain KYK33_00480 PF00376 MerR family regulatory protein KYK33_00480 PF09278 MerR, DNA binding KYK33_00485 PF00360 Phytochrome region KYK33_00485 PF00563 EAL domain KYK33_00485 PF01590 GAF domain KYK33_00485 PF00990 Diguanylate cyclase, GGDEF domain KYK33_00490 PF06288 Protein of unknown function (DUF1040) KYK33_00495 PF13746 4Fe-4S dicluster domain KYK33_00495 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase KYK33_00495 PF12801 4Fe-4S binding domain KYK33_00500 PF01636 Phosphotransferase enzyme family KYK33_00505 PF01323 DSBA-like thioredoxin domain KYK33_00510 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_00515 PF00005 ABC transporter KYK33_00525 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KYK33_00525 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KYK33_00530 PF00857 Isochorismatase family KYK33_00540 PF04463 Protein of unknown function (DUF523) KYK33_00545 PF01553 Acyltransferase KYK33_00550 PF01553 Acyltransferase KYK33_00555 PF01078 Magnesium chelatase, subunit ChlI KYK33_00555 PF13335 Magnesium chelatase, subunit ChlI C-terminal KYK33_00560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KYK33_00560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KYK33_00560 PF00205 Thiamine pyrophosphate enzyme, central domain KYK33_00570 PF01063 Amino-transferase class IV KYK33_00575 PF00920 Dehydratase family KYK33_00580 PF00291 Pyridoxal-phosphate dependent enzyme KYK33_00580 PF00585 C-terminal regulatory domain of Threonine dehydratase KYK33_00585 PF00691 OmpA family KYK33_00585 PF01389 OmpA-like transmembrane domain KYK33_00630 PF00756 Putative esterase KYK33_00635 PF08240 Alcohol dehydrogenase GroES-like domain KYK33_00635 PF00107 Zinc-binding dehydrogenase KYK33_00640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_00640 PF03466 LysR substrate binding domain KYK33_00645 PF02653 Branched-chain amino acid transport system / permease component KYK33_00650 PF02653 Branched-chain amino acid transport system / permease component KYK33_00655 PF00005 ABC transporter KYK33_00660 PF02608 ABC transporter substrate-binding protein PnrA-like KYK33_00665 PF13361 UvrD-like helicase C-terminal domain KYK33_00665 PF00580 UvrD/REP helicase N-terminal domain KYK33_00705 PF00155 Aminotransferase class I and II KYK33_00705 PF00392 Bacterial regulatory proteins, gntR family KYK33_00710 PF01810 LysE type translocator KYK33_00715 PF12833 Helix-turn-helix domain KYK33_00720 PF00892 EamA-like transporter family KYK33_00730 PF02368 Bacterial Ig-like domain (group 2) KYK33_00730 PF11999 Protein of unknown function (DUF3494) KYK33_00735 PF00171 Aldehyde dehydrogenase family KYK33_00740 PF07883 Cupin domain KYK33_00740 PF01381 Helix-turn-helix KYK33_00745 PF00202 Aminotransferase class-III KYK33_00750 PF00171 Aldehyde dehydrogenase family KYK33_00755 PF00117 Glutamine amidotransferase class-I KYK33_00755 PF00958 GMP synthase C terminal domain KYK33_00755 PF02540 NAD synthase KYK33_00760 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KYK33_00760 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KYK33_00765 PF00294 pfkB family carbohydrate kinase KYK33_00770 PF02082 Transcriptional regulator KYK33_00785 PF02646 RmuC family KYK33_00790 PF02386 Cation transport protein KYK33_00795 PF02080 TrkA-C domain KYK33_00795 PF02254 TrkA-N domain KYK33_00800 PF01189 16S rRNA methyltransferase RsmB/F KYK33_00800 PF01029 NusB family KYK33_00805 PF02911 Formyl transferase, C-terminal domain KYK33_00805 PF00551 Formyl transferase KYK33_00810 PF01327 Polypeptide deformylase KYK33_00815 PF01476 LysM domain KYK33_00820 PF02481 DNA recombination-mediator protein A KYK33_00820 PF17782 DprA winged helix domain KYK33_00825 PF04361 Protein of unknown function (DUF494) KYK33_00830 PF01396 Topoisomerase DNA binding C4 zinc finger KYK33_00835 PF00731 AIR carboxylase KYK33_00840 PF01300 Telomere recombination KYK33_00845 PF01218 Coproporphyrinogen III oxidase KYK33_00850 PF01488 Shikimate / quinate 5-dehydrogenase KYK33_00850 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KYK33_00850 PF08501 Shikimate dehydrogenase substrate binding domain KYK33_00855 PF01926 50S ribosome-binding GTPase KYK33_00860 PF00034 Cytochrome c KYK33_00865 PF04220 Der GTPase activator (YihI) KYK33_00870 PF10675 Protein of unknown function (DUF2489) KYK33_00875 PF04055 Radical SAM superfamily KYK33_00875 PF06969 HemN C-terminal domain KYK33_00885 PF00962 Adenosine/AMP deaminase KYK33_00890 PF03590 Aspartate-ammonia ligase KYK33_00895 PF01037 Lrp/AsnC ligand binding domain KYK33_00905 PF01368 DHH family KYK33_00905 PF02272 DHHA1 domain KYK33_00905 PF01743 Poly A polymerase head domain KYK33_00905 PF00571 CBS domain KYK33_00925 PF00512 His Kinase A (phospho-acceptor) domain KYK33_00925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_00935 PF00072 Response regulator receiver domain KYK33_00935 PF00158 Sigma-54 interaction domain KYK33_00940 PF06496 Protein of unknown function (DUF1097) KYK33_00945 PF00174 Oxidoreductase molybdopterin binding domain KYK33_00950 PF01794 Ferric reductase like transmembrane component KYK33_00965 PF00072 Response regulator receiver domain KYK33_00965 PF00486 Transcriptional regulatory protein, C terminal KYK33_00970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_00980 PF00384 Molybdopterin oxidoreductase KYK33_00980 PF18364 Molybdopterin oxidoreductase N-terminal domain KYK33_00980 PF01568 Molydopterin dinucleotide binding domain KYK33_00985 PF03264 NapC/NirT cytochrome c family, N-terminal region KYK33_00990 PF01131 DNA topoisomerase KYK33_00990 PF01751 Toprim domain KYK33_00995 PF02386 Cation transport protein KYK33_01000 PF02254 TrkA-N domain KYK33_01000 PF02080 TrkA-C domain KYK33_01005 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KYK33_01005 PF01565 FAD binding domain KYK33_01010 PF08279 HTH domain KYK33_01010 PF03099 Biotin/lipoate A/B protein ligase family KYK33_01010 PF02237 Biotin protein ligase C terminal domain KYK33_01015 PF00485 Phosphoribulokinase / Uridine kinase family KYK33_01030 PF00009 Elongation factor Tu GTP binding domain KYK33_01030 PF03143 Elongation factor Tu C-terminal domain KYK33_01030 PF03144 Elongation factor Tu domain 2 KYK33_01040 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KYK33_01045 PF02357 Transcription termination factor nusG KYK33_01045 PF00467 KOW motif KYK33_01050 PF00298 Ribosomal protein L11, RNA binding domain KYK33_01050 PF03946 Ribosomal protein L11, N-terminal domain KYK33_01055 PF00687 Ribosomal protein L1p/L10e family KYK33_01060 PF00466 Ribosomal protein L10 KYK33_01065 PF00542 Ribosomal protein L7/L12 C-terminal domain KYK33_01065 PF16320 Ribosomal protein L7/L12 dimerisation domain KYK33_01070 PF04563 RNA polymerase beta subunit KYK33_01070 PF04561 RNA polymerase Rpb2, domain 2 KYK33_01070 PF04565 RNA polymerase Rpb2, domain 3 KYK33_01070 PF10385 RNA polymerase beta subunit external 1 domain KYK33_01070 PF00562 RNA polymerase Rpb2, domain 6 KYK33_01070 PF04560 RNA polymerase Rpb2, domain 7 KYK33_01075 PF04997 RNA polymerase Rpb1, domain 1 KYK33_01075 PF00623 RNA polymerase Rpb1, domain 2 KYK33_01075 PF04983 RNA polymerase Rpb1, domain 3 KYK33_01075 PF05000 RNA polymerase Rpb1, domain 4 KYK33_01075 PF04998 RNA polymerase Rpb1, domain 5 KYK33_01080 PF13309 HTH domain KYK33_01080 PF08348 YheO-like PAS domain KYK33_01085 PF01042 Endoribonuclease L-PSP KYK33_01090 PF02635 DsrE/DsrF-like family KYK33_01095 PF02635 DsrE/DsrF-like family KYK33_01100 PF04077 DsrH like protein KYK33_01105 PF00164 Ribosomal protein S12/S23 KYK33_01110 PF00177 Ribosomal protein S7p/S5e KYK33_01115 PF03764 Elongation factor G, domain IV KYK33_01115 PF00009 Elongation factor Tu GTP binding domain KYK33_01115 PF03144 Elongation factor Tu domain 2 KYK33_01115 PF00679 Elongation factor G C-terminus KYK33_01115 PF14492 Elongation Factor G, domain II KYK33_01120 PF00009 Elongation factor Tu GTP binding domain KYK33_01120 PF03144 Elongation factor Tu domain 2 KYK33_01120 PF03143 Elongation factor Tu C-terminal domain KYK33_01175 PF00999 Sodium/hydrogen exchanger family KYK33_01175 PF02254 TrkA-N domain KYK33_01180 PF02525 Flavodoxin-like fold KYK33_01185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_01185 PF03466 LysR substrate binding domain KYK33_01190 PF00106 short chain dehydrogenase KYK33_01205 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KYK33_01205 PF00326 Prolyl oligopeptidase family KYK33_01225 PF07947 YhhN family KYK33_01230 PF07690 Major Facilitator Superfamily KYK33_01235 PF13533 Biotin-lipoyl like KYK33_01240 PF03466 LysR substrate binding domain KYK33_01240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_01250 PF00375 Sodium:dicarboxylate symporter family KYK33_01260 PF01914 MarC family integral membrane protein KYK33_01265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_01265 PF03466 LysR substrate binding domain KYK33_01275 PF00497 Bacterial extracellular solute-binding proteins, family 3 KYK33_01275 PF01464 Transglycosylase SLT domain KYK33_01280 PF13091 PLD-like domain KYK33_01290 PF00440 Bacterial regulatory proteins, tetR family KYK33_01310 PF00448 SRP54-type protein, GTPase domain KYK33_01310 PF02881 SRP54-type protein, helical bundle domain KYK33_01315 PF00005 ABC transporter KYK33_01320 PF18075 FtsX extracellular domain KYK33_01325 PF00140 Sigma-70 factor, region 1.2 KYK33_01325 PF04545 Sigma-70, region 4 KYK33_01325 PF04542 Sigma-70 region 2 KYK33_01330 PF00484 Carbonic anhydrase KYK33_01335 PF00392 Bacterial regulatory proteins, gntR family KYK33_01335 PF07702 UTRA domain KYK33_01340 PF07670 Nucleoside recognition KYK33_01345 PF01979 Amidohydrolase family KYK33_01350 PF00491 Arginase family KYK33_01355 PF01175 Urocanase Rossmann-like domain KYK33_01355 PF17392 Urocanase C-terminal domain KYK33_01355 PF17391 Urocanase N-terminal domain KYK33_01360 PF00221 Aromatic amino acid lyase KYK33_01365 PF01699 Sodium/calcium exchanger protein KYK33_01385 PF00182 Chitinase class I KYK33_01410 PF04717 Type VI secretion system, phage-baseplate injector KYK33_01415 PF05638 Type VI secretion system effector, Hcp KYK33_01425 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KYK33_01440 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase KYK33_01445 PF02602 Uroporphyrinogen-III synthase HemD KYK33_01450 PF03900 Porphobilinogen deaminase, C-terminal domain KYK33_01450 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KYK33_01455 PF12633 Adenylate cyclase NT domain KYK33_01455 PF01295 Adenylate cyclase, class-I KYK33_01465 PF01491 Frataxin-like domain KYK33_01475 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KYK33_01475 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KYK33_01480 PF01678 Diaminopimelate epimerase KYK33_01490 PF00589 Phage integrase family KYK33_01490 PF02899 Phage integrase, N-terminal SAM-like domain KYK33_01495 PF13419 Haloacid dehalogenase-like hydrolase KYK33_01505 PF07722 Peptidase C26 KYK33_01525 PF00005 ABC transporter KYK33_01535 PF00994 Probable molybdopterin binding domain KYK33_01545 PF04204 Homoserine O-succinyltransferase KYK33_01550 PF00999 Sodium/hydrogen exchanger family KYK33_01555 PF02965 Vitamin B12 dependent methionine synthase, activation domain KYK33_01555 PF00809 Pterin binding enzyme KYK33_01555 PF02574 Homocysteine S-methyltransferase KYK33_01555 PF02607 B12 binding domain KYK33_01555 PF02310 B12 binding domain KYK33_01560 PF18030 RimK PreATP-grasp domain KYK33_01560 PF08443 RimK-like ATP-grasp domain KYK33_01580 PF00106 short chain dehydrogenase KYK33_01595 PF00465 Iron-containing alcohol dehydrogenase KYK33_01605 PF01053 Cys/Met metabolism PLP-dependent enzyme KYK33_01615 PF12793 Sugar transport-related sRNA regulator N-term KYK33_01615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KYK33_01620 PF00141 Peroxidase KYK33_01640 PF00561 alpha/beta hydrolase fold KYK33_01650 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KYK33_01650 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KYK33_01655 PF02698 DUF218 domain KYK33_01660 PF08453 Peptidase family M9 N-terminal KYK33_01660 PF01752 Collagenase KYK33_01665 PF00501 AMP-binding enzyme KYK33_01670 PF13378 Enolase C-terminal domain-like KYK33_01675 PF00378 Enoyl-CoA hydratase/isomerase KYK33_01680 PF12697 Alpha/beta hydrolase family KYK33_01685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KYK33_01685 PF16582 Middle domain of thiamine pyrophosphate KYK33_01685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KYK33_01690 PF00425 chorismate binding enzyme KYK33_01695 PF01040 UbiA prenyltransferase family KYK33_01705 PF00072 Response regulator receiver domain KYK33_01705 PF00486 Transcriptional regulatory protein, C terminal KYK33_01720 PF05935 Arylsulfotransferase (ASST) KYK33_01720 PF17425 Arylsulfotransferase Ig-like domain KYK33_01725 PF01964 Radical SAM ThiC family KYK33_01725 PF13667 ThiC-associated domain KYK33_01730 PF02581 Thiamine monophosphate synthase KYK33_01735 PF00899 ThiF family KYK33_01745 PF05690 Thiazole biosynthesis protein ThiG KYK33_01750 PF04055 Radical SAM superfamily KYK33_01750 PF06968 Biotin and Thiamin Synthesis associated domain KYK33_01760 PF00132 Bacterial transferase hexapeptide (six repeats) KYK33_01765 PF13036 Peptidoglycan-synthase activator LpoB KYK33_01770 PF06055 Exopolysaccharide synthesis, ExoD KYK33_01775 PF01975 Survival protein SurE KYK33_01785 PF00375 Sodium:dicarboxylate symporter family KYK33_01810 PF08241 Methyltransferase domain KYK33_01815 PF00990 Diguanylate cyclase, GGDEF domain KYK33_01830 PF00072 Response regulator receiver domain KYK33_01830 PF00486 Transcriptional regulatory protein, C terminal KYK33_01835 PF00672 HAMP domain KYK33_01835 PF00512 His Kinase A (phospho-acceptor) domain KYK33_01835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_01840 PF07715 TonB-dependent Receptor Plug Domain KYK33_01840 PF00593 TonB dependent receptor KYK33_01845 PF00313 'Cold-shock' DNA-binding domain KYK33_01870 PF01381 Helix-turn-helix KYK33_01875 PF09722 Protein of unknown function (DUF2384) KYK33_01895 PF00580 UvrD/REP helicase N-terminal domain KYK33_01895 PF13361 UvrD-like helicase C-terminal domain KYK33_01905 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KYK33_01915 PF00436 Single-strand binding protein family KYK33_01920 PF00196 Bacterial regulatory proteins, luxR family KYK33_01925 PF10627 Curli assembly protein CsgE KYK33_01935 PF03783 Curli production assembly/transport component CsgG KYK33_01960 PF03922 OmpW family KYK33_01965 PF00672 HAMP domain KYK33_01965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_01970 PF01547 Bacterial extracellular solute-binding protein KYK33_01980 PF02219 Methylenetetrahydrofolate reductase KYK33_01985 PF03594 Benzoate membrane transport protein KYK33_01990 PF01381 Helix-turn-helix KYK33_01990 PF07883 Cupin domain KYK33_02020 PF04363 Protein of unknown function (DUF496) KYK33_02030 PF04751 Protein of unknown function (DUF615) KYK33_02035 PF01523 Putative modulator of DNA gyrase KYK33_02040 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KYK33_02045 PF01722 BolA-like protein KYK33_02055 PF05494 MlaC protein KYK33_02060 PF02470 MlaD protein KYK33_02065 PF02405 Permease MlaE KYK33_02070 PF00005 ABC transporter KYK33_02075 PF00571 CBS domain KYK33_02075 PF01380 SIS domain KYK33_02090 PF03968 OstA-like protein KYK33_02095 PF00005 ABC transporter KYK33_02095 PF12399 Branched-chain amino acid ATP-binding cassette transporter KYK33_02100 PF00309 Sigma-54 factor, Activator interacting domain (AID) KYK33_02100 PF04963 Sigma-54 factor, core binding domain KYK33_02100 PF04552 Sigma-54, DNA binding domain KYK33_02105 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KYK33_02110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KYK33_02115 PF03668 P-loop ATPase protein family KYK33_02120 PF00381 PTS HPr component phosphorylation site KYK33_02125 PF08279 HTH domain KYK33_02125 PF05043 Mga helix-turn-helix domain KYK33_02125 PF00874 PRD domain KYK33_02125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KYK33_02130 PF07071 KDGP aldolase KYK33_02135 PF03841 L-seryl-tRNA selenium transferase KYK33_02140 PF01979 Amidohydrolase family KYK33_02170 PF13180 PDZ domain KYK33_02175 PF13180 PDZ domain KYK33_02175 PF00595 PDZ domain KYK33_02185 PF03969 AFG1-like ATPase KYK33_02190 PF00572 Ribosomal protein L13 KYK33_02195 PF00380 Ribosomal protein S9/S16 KYK33_02200 PF00355 Rieske [2Fe-2S] domain KYK33_02200 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal KYK33_02205 PF00032 Cytochrome b(C-terminal)/b6/petD KYK33_02205 PF00033 Cytochrome b/b6/petB KYK33_02210 PF02167 Cytochrome C1 family KYK33_02215 PF02798 Glutathione S-transferase, N-terminal domain KYK33_02215 PF00043 Glutathione S-transferase, C-terminal domain KYK33_02220 PF04386 Stringent starvation protein B KYK33_02225 PF04972 BON domain KYK33_02230 PF13580 SIS domain KYK33_02235 PF02021 Uncharacterised protein family UPF0102 KYK33_02240 PF04348 LppC putative lipoprotein KYK33_02245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KYK33_02260 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KYK33_02265 PF00813 FliP family KYK33_02270 PF01313 Bacterial export proteins, family 3 KYK33_02275 PF01311 Bacterial export proteins, family 1 KYK33_02280 PF01312 FlhB HrpN YscU SpaS Family KYK33_02285 PF00771 FHIPEP family KYK33_02290 PF00072 Response regulator receiver domain KYK33_02290 PF00158 Sigma-54 interaction domain KYK33_02290 PF02954 Bacterial regulatory protein, Fis family KYK33_02295 PF02049 Flagellar hook-basal body complex protein FliE KYK33_02300 PF08345 Flagellar M-ring protein C-terminal KYK33_02300 PF01514 Secretory protein of YscJ/FliF family KYK33_02305 PF14842 FliG N-terminal domain KYK33_02305 PF14841 FliG middle domain KYK33_02305 PF01706 FliG C-terminal domain KYK33_02315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KYK33_02315 PF18269 T3SS EscN ATPase C-terminal domain KYK33_02340 PF00460 Flagella basal body rod protein KYK33_02345 PF00460 Flagella basal body rod protein KYK33_02345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KYK33_02350 PF13861 FlgD Tudor-like domain KYK33_02350 PF03963 Flagellar hook capping protein - N-terminal region KYK33_02350 PF13860 FlgD Ig-like domain KYK33_02355 PF07559 Flagellar basal body protein FlaE KYK33_02355 PF00460 Flagella basal body rod protein KYK33_02355 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KYK33_02360 PF00460 Flagella basal body rod protein KYK33_02360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KYK33_02365 PF00460 Flagella basal body rod protein KYK33_02365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KYK33_02370 PF02107 Flagellar L-ring protein KYK33_02375 PF02119 Flagellar P-ring protein KYK33_02385 PF00460 Flagella basal body rod protein KYK33_02385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KYK33_02405 PF00700 Bacterial flagellin C-terminal helical region KYK33_02405 PF00669 Bacterial flagellin N-terminal helical region KYK33_02410 PF00700 Bacterial flagellin C-terminal helical region KYK33_02410 PF00669 Bacterial flagellin N-terminal helical region KYK33_02415 PF07196 Flagellin hook IN motif KYK33_02415 PF02465 Flagellar hook-associated protein 2 N-terminus KYK33_02415 PF07195 Flagellar hook-associated protein 2 C-terminus KYK33_02420 PF02561 Flagellar protein FliS KYK33_02440 PF04545 Sigma-70, region 4 KYK33_02440 PF04542 Sigma-70 region 2 KYK33_02445 PF01618 MotA/TolQ/ExbB proton channel family KYK33_02450 PF00691 OmpA family KYK33_02450 PF13677 Membrane MotB of proton-channel complex MotA/MotB KYK33_02460 PF01476 LysM domain KYK33_02460 PF01464 Transglycosylase SLT domain KYK33_02470 PF02381 MraZ protein, putative antitoxin-like KYK33_02475 PF01795 MraW methylase family KYK33_02480 PF04999 Cell division protein FtsL KYK33_02485 PF00905 Penicillin binding protein transpeptidase domain KYK33_02485 PF03717 Penicillin-binding Protein dimerisation domain KYK33_02490 PF08245 Mur ligase middle domain KYK33_02490 PF02875 Mur ligase family, glutamate ligase domain KYK33_02490 PF01225 Mur ligase family, catalytic domain KYK33_02495 PF08245 Mur ligase middle domain KYK33_02495 PF02875 Mur ligase family, glutamate ligase domain KYK33_02495 PF01225 Mur ligase family, catalytic domain KYK33_02500 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KYK33_02500 PF00953 Glycosyl transferase family 4 KYK33_02505 PF08245 Mur ligase middle domain KYK33_02505 PF02875 Mur ligase family, glutamate ligase domain KYK33_02510 PF01098 Cell cycle protein KYK33_02515 PF03033 Glycosyltransferase family 28 N-terminal domain KYK33_02515 PF04101 Glycosyltransferase family 28 C-terminal domain KYK33_02520 PF01225 Mur ligase family, catalytic domain KYK33_02520 PF02875 Mur ligase family, glutamate ligase domain KYK33_02520 PF08245 Mur ligase middle domain KYK33_02525 PF08478 POTRA domain, FtsQ-type KYK33_02525 PF03799 Cell division protein FtsQ KYK33_02530 PF02491 SHS2 domain inserted in FTSA KYK33_02535 PF00091 Tubulin/FtsZ family, GTPase domain KYK33_02535 PF12327 FtsZ family, C-terminal domain KYK33_02540 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KYK33_02545 PF01476 LysM domain KYK33_02545 PF01551 Peptidase family M23 KYK33_02550 PF02810 SEC-C motif KYK33_02550 PF07516 SecA Wing and Scaffold domain KYK33_02550 PF01043 SecA preprotein cross-linking domain KYK33_02550 PF07517 SecA DEAD-like domain KYK33_02560 PF03884 DNA gyrase inhibitor YacG KYK33_02565 PF07072 Cell division protein KYK33_02570 PF01121 Dephospho-CoA kinase KYK33_02575 PF06750 Bacterial Peptidase A24 N-terminal domain KYK33_02575 PF01478 Type IV leader peptidase family KYK33_02580 PF00482 Type II secretion system (T2SS), protein F KYK33_02585 PF00437 Type II/IV secretion system protein KYK33_02585 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KYK33_02590 PF07963 Prokaryotic N-terminal methylation motif KYK33_02595 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KYK33_02595 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KYK33_02605 PF01510 N-acetylmuramoyl-L-alanine amidase KYK33_02610 PF00392 Bacterial regulatory proteins, gntR family KYK33_02610 PF07729 FCD domain KYK33_02615 PF00456 Transketolase, thiamine diphosphate binding domain KYK33_02615 PF17831 Pyruvate dehydrogenase E1 component middle domain KYK33_02620 PF02817 e3 binding domain KYK33_02620 PF00364 Biotin-requiring enzyme KYK33_02620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KYK33_02625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KYK33_02625 PF07992 Pyridine nucleotide-disulphide oxidoreductase KYK33_02630 PF00672 HAMP domain KYK33_02630 PF12729 Four helix bundle sensory module for signal transduction KYK33_02630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_02635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_02635 PF02743 Cache domain KYK33_02635 PF00672 HAMP domain KYK33_02640 PF01734 Patatin-like phospholipase KYK33_02645 PF11791 Aconitate B N-terminal domain KYK33_02645 PF06434 Aconitate hydratase 2 N-terminus KYK33_02645 PF00330 Aconitase family (aconitate hydratase) KYK33_02650 PF00563 EAL domain KYK33_02650 PF12792 CSS motif domain associated with EAL KYK33_02655 PF00563 EAL domain KYK33_02655 PF12792 CSS motif domain associated with EAL KYK33_02665 PF02492 CobW/HypB/UreG, nucleotide-binding domain KYK33_02665 PF07683 Cobalamin synthesis protein cobW C-terminal domain KYK33_02670 PF07690 Major Facilitator Superfamily KYK33_02675 PF12729 Four helix bundle sensory module for signal transduction KYK33_02675 PF00672 HAMP domain KYK33_02675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_02680 PF04073 Aminoacyl-tRNA editing domain KYK33_02685 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KYK33_02690 PF02152 Dihydroneopterin aldolase KYK33_02695 PF02660 Glycerol-3-phosphate acyltransferase KYK33_02730 PF12833 Helix-turn-helix domain KYK33_02730 PF02311 AraC-like ligand binding domain KYK33_02750 PF14602 Hexapeptide repeat of succinyl-transferase KYK33_02750 PF12464 Maltose acetyltransferase KYK33_02755 PF11941 Domain of unknown function (DUF3459) KYK33_02755 PF00128 Alpha amylase, catalytic domain KYK33_02760 PF00367 phosphotransferase system, EIIB KYK33_02760 PF02378 Phosphotransferase system, EIIC KYK33_02765 PF00356 Bacterial regulatory proteins, lacI family KYK33_02780 PF17763 Glutaminase/Asparaginase C-terminal domain KYK33_02780 PF00710 Asparaginase, N-terminal KYK33_02795 PF02142 MGS-like domain KYK33_02800 PF00210 Ferritin-like domain KYK33_02805 PF04324 BFD-like [2Fe-2S] binding domain KYK33_02815 PF05127 Helicase KYK33_02815 PF17176 tRNA-binding domain KYK33_02815 PF13718 GNAT acetyltransferase 2 KYK33_02815 PF08351 Domain of unknown function (DUF1726) KYK33_02820 PF03553 Na+/H+ antiporter family KYK33_02855 PF00534 Glycosyl transferases group 1 KYK33_02855 PF08323 Starch synthase catalytic domain KYK33_02860 PF00483 Nucleotidyl transferase KYK33_02865 PF08468 Methyltransferase small domain N-terminal KYK33_02865 PF05175 Methyltransferase small domain KYK33_02870 PF00701 Dihydrodipicolinate synthetase family KYK33_02875 PF00360 Phytochrome region KYK33_02875 PF00990 Diguanylate cyclase, GGDEF domain KYK33_02875 PF01590 GAF domain KYK33_02875 PF00563 EAL domain KYK33_02880 PF13419 Haloacid dehalogenase-like hydrolase KYK33_02885 PF17209 Hfq protein KYK33_02890 PF04403 Paraquat-inducible protein A KYK33_02895 PF02470 MlaD protein KYK33_02900 PF03886 ABC-type transport auxiliary lipoprotein component KYK33_02905 PF01389 OmpA-like transmembrane domain KYK33_02905 PF00691 OmpA family KYK33_02910 PF00657 GDSL-like Lipase/Acylhydrolase KYK33_02915 PF04076 Bacterial OB fold (BOF) protein KYK33_02920 PF01464 Transglycosylase SLT domain KYK33_02920 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain KYK33_02925 PF04362 Bacterial Fe(2+) trafficking KYK33_02930 PF14815 NUDIX domain KYK33_02930 PF10576 Iron-sulfur binding domain of endonuclease III KYK33_02930 PF00633 Helix-hairpin-helix motif KYK33_02930 PF00730 HhH-GPD superfamily base excision DNA repair protein KYK33_02935 PF16537 Type II secretion system protein B KYK33_02940 PF01471 Putative peptidoglycan binding domain KYK33_02940 PF13401 AAA domain KYK33_02945 PF01966 HD domain KYK33_02945 PF01743 Poly A polymerase head domain KYK33_02945 PF12627 Probable RNA and SrmB- binding site of polymerase A KYK33_02950 PF01384 Phosphate transporter family KYK33_02955 PF01865 Protein of unknown function DUF47 KYK33_02960 PF01928 CYTH domain KYK33_02970 PF03279 Bacterial lipid A biosynthesis acyltransferase KYK33_02975 PF00294 pfkB family carbohydrate kinase KYK33_02975 PF01467 Cytidylyltransferase-like KYK33_02980 PF02321 Outer membrane efflux protein KYK33_02985 PF00293 NUDIX domain KYK33_02990 PF06853 Protein of unknown function (DUF1249) KYK33_02995 PF00149 Calcineurin-like phosphoesterase KYK33_03000 PF05728 Uncharacterised protein family (UPF0227) KYK33_03005 PF00293 NUDIX domain KYK33_03015 PF07869 Protein of unknown function (DUF1656) KYK33_03020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KYK33_03020 PF00529 HlyD membrane-fusion protein of T1SS KYK33_03025 PF04632 Fusaric acid resistance protein family KYK33_03030 PF00204 DNA gyrase B KYK33_03030 PF00986 DNA gyrase B subunit, carboxyl terminus KYK33_03030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_03030 PF01751 Toprim domain KYK33_03035 PF03989 DNA gyrase C-terminal domain, beta-propeller KYK33_03035 PF00521 DNA gyrase/topoisomerase IV, subunit A KYK33_03040 PF04229 GrpB protein KYK33_03075 PF00684 DnaJ central domain KYK33_03075 PF01556 DnaJ C terminal domain KYK33_03075 PF00226 DnaJ domain KYK33_03085 PF00578 AhpC/TSA family KYK33_03105 PF01553 Acyltransferase KYK33_03110 PF04012 PspA/IM30 family KYK33_03125 PF01541 GIY-YIG catalytic domain KYK33_03130 PF00892 EamA-like transporter family KYK33_03135 PF03167 Uracil DNA glycosylase superfamily KYK33_03140 PF00892 EamA-like transporter family KYK33_03145 PF03466 LysR substrate binding domain KYK33_03145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_03150 PF00950 ABC 3 transport family KYK33_03155 PF00005 ABC transporter KYK33_03160 PF01297 Zinc-uptake complex component A periplasmic KYK33_03180 PF01476 LysM domain KYK33_03180 PF08525 Opacity-associated protein A N-terminal motif KYK33_03180 PF01551 Peptidase family M23 KYK33_03185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KYK33_03190 PF04222 Protein of unknown function (DUF416) KYK33_03205 PF02028 BCCT, betaine/carnitine/choline family transporter KYK33_03210 PF00488 MutS domain V KYK33_03210 PF05190 MutS family domain IV KYK33_03210 PF05192 MutS domain III KYK33_03210 PF05188 MutS domain II KYK33_03210 PF01624 MutS domain I KYK33_03215 PF02464 Competence-damaged protein KYK33_03220 PF00154 recA bacterial DNA recombination protein KYK33_03225 PF02631 RecX family KYK33_03230 PF01411 tRNA synthetases class II (A) KYK33_03230 PF02272 DHHA1 domain KYK33_03230 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KYK33_03235 PF13840 ACT domain KYK33_03235 PF01842 ACT domain KYK33_03235 PF00696 Amino acid kinase family KYK33_03240 PF02599 Global regulator protein family KYK33_03275 PF00768 D-alanyl-D-alanine carboxypeptidase KYK33_03280 PF09335 SNARE associated Golgi protein KYK33_03285 PF01595 Cyclin M transmembrane N-terminal domain KYK33_03285 PF00571 CBS domain KYK33_03285 PF03471 Transporter associated domain KYK33_03290 PF08264 Anticodon-binding domain of tRNA KYK33_03290 PF00133 tRNA synthetases class I (I, L, M and V) KYK33_03290 PF10458 Valyl tRNA synthetase tRNA binding arm KYK33_03300 PF02789 Cytosol aminopeptidase family, N-terminal domain KYK33_03300 PF00883 Cytosol aminopeptidase family, catalytic domain KYK33_03305 PF03739 Lipopolysaccharide export system permease LptF/LptG KYK33_03310 PF03739 Lipopolysaccharide export system permease LptF/LptG KYK33_03325 PF00909 Ammonium Transporter Family KYK33_03330 PF05958 tRNA (Uracil-5-)-methyltransferase KYK33_03330 PF01938 TRAM domain KYK33_03340 PF01026 TatD related DNase KYK33_03345 PF07670 Nucleoside recognition KYK33_03345 PF07662 Na+ dependent nucleoside transporter C-terminus KYK33_03345 PF01773 Na+ dependent nucleoside transporter N-terminus KYK33_03355 PF01791 DeoC/LacD family aldolase KYK33_03360 PF02885 Glycosyl transferase family, helical bundle domain KYK33_03360 PF00591 Glycosyl transferase family, a/b domain KYK33_03360 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KYK33_03365 PF01676 Metalloenzyme superfamily KYK33_03370 PF01048 Phosphorylase superfamily KYK33_03380 PF11737 Protein of unknown function (DUF3300) KYK33_03390 PF18429 Domain of unknown function (DUF5609) KYK33_03405 PF18073 Rubredoxin metal binding domain KYK33_03410 PF07238 PilZ domain KYK33_03415 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ KYK33_03420 PF00216 Bacterial DNA-binding protein KYK33_03435 PF02594 Uncharacterised ACR, YggU family COG1872 KYK33_03440 PF02325 YGGT family KYK33_03445 PF03807 NADP oxidoreductase coenzyme F420-dependent KYK33_03445 PF14748 Pyrroline-5-carboxylate reductase dimerisation KYK33_03450 PF01168 Alanine racemase, N-terminal domain KYK33_03455 PF00437 Type II/IV secretion system protein KYK33_03460 PF00437 Type II/IV secretion system protein KYK33_03465 PF03883 Peroxide stress protein YaaA KYK33_03470 PF00270 DEAD/DEAH box helicase KYK33_03470 PF00271 Helicase conserved C-terminal domain KYK33_03475 PF05175 Methyltransferase small domain KYK33_03480 PF05525 Branched-chain amino acid transport protein KYK33_03495 PF01475 Ferric uptake regulator family KYK33_03500 PF01207 Dihydrouridine synthase (Dus) KYK33_03515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KYK33_03525 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KYK33_03530 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KYK33_03535 PF03480 Bacterial extracellular solute-binding protein, family 7 KYK33_03540 PF02954 Bacterial regulatory protein, Fis family KYK33_03540 PF00158 Sigma-54 interaction domain KYK33_03540 PF00072 Response regulator receiver domain KYK33_03545 PF02743 Cache domain KYK33_03545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_03545 PF00512 His Kinase A (phospho-acceptor) domain KYK33_03550 PF10952 Protein of unknown function (DUF2753) KYK33_03555 PF00378 Enoyl-CoA hydratase/isomerase KYK33_03570 PF00106 short chain dehydrogenase KYK33_03575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KYK33_03575 PF03129 Anticodon binding domain KYK33_03575 PF04073 Aminoacyl-tRNA editing domain KYK33_03585 PF01330 RuvA N terminal domain KYK33_03585 PF07499 RuvA, C-terminal domain KYK33_03590 PF17864 RuvB AAA lid domain KYK33_03590 PF05491 RuvB C-terminal winged helix domain KYK33_03590 PF05496 Holliday junction DNA helicase RuvB P-loop domain KYK33_03595 PF01654 Cytochrome bd terminal oxidase subunit I KYK33_03600 PF02322 Cytochrome bd terminal oxidase subunit II KYK33_03605 PF08173 Membrane bound YbgT-like protein KYK33_03615 PF03061 Thioesterase superfamily KYK33_03620 PF01618 MotA/TolQ/ExbB proton channel family KYK33_03625 PF02472 Biopolymer transport protein ExbD/TolR KYK33_03635 PF04052 TolB amino-terminal domain KYK33_03635 PF07676 WD40-like Beta Propeller Repeat KYK33_03640 PF00691 OmpA family KYK33_03645 PF13174 Tetratricopeptide repeat KYK33_03645 PF16331 TolA binding protein trimerisation KYK33_03720 PF02445 Quinolinate synthetase A protein KYK33_03730 PF01263 Aldose 1-epimerase KYK33_03735 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KYK33_03735 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KYK33_03740 PF02446 4-alpha-glucanotransferase KYK33_03745 PF00128 Alpha amylase, catalytic domain KYK33_03745 PF02806 Alpha amylase, C-terminal all-beta domain KYK33_03745 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KYK33_03750 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KYK33_03750 PF00128 Alpha amylase, catalytic domain KYK33_03755 PF01641 SelR domain KYK33_03765 PF00293 NUDIX domain KYK33_03770 PF00107 Zinc-binding dehydrogenase KYK33_03770 PF16884 N-terminal domain of oxidoreductase KYK33_03775 PF02566 OsmC-like protein KYK33_03780 PF01047 MarR family KYK33_03795 PF01037 Lrp/AsnC ligand binding domain KYK33_03805 PF07690 Major Facilitator Superfamily KYK33_03825 PF00209 Sodium:neurotransmitter symporter family KYK33_03830 PF00209 Sodium:neurotransmitter symporter family KYK33_03840 PF00155 Aminotransferase class I and II KYK33_03840 PF00392 Bacterial regulatory proteins, gntR family KYK33_03855 PF01177 Asp/Glu/Hydantoin racemase KYK33_03865 PF04074 YhcH/YjgK/YiaL KYK33_03870 PF00871 Acetokinase family KYK33_03875 PF00924 Mechanosensitive ion channel KYK33_03880 PF17969 L,D-transpeptidase C-terminal domain KYK33_03880 PF03734 L,D-transpeptidase catalytic domain KYK33_03885 PF00474 Sodium:solute symporter family KYK33_03895 PF02525 Flavodoxin-like fold KYK33_03900 PF13411 MerR HTH family regulatory protein KYK33_03935 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KYK33_03945 PF00005 ABC transporter KYK33_03945 PF12848 ABC transporter KYK33_03955 PF01957 NfeD-like C-terminal, partner-binding KYK33_03960 PF01145 SPFH domain / Band 7 family KYK33_03960 PF16200 C-terminal region of band_7 KYK33_03965 PF10414 Sirohaem synthase dimerisation region KYK33_03965 PF14824 Sirohaem biosynthesis protein central KYK33_03965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KYK33_03970 PF01507 Phosphoadenosine phosphosulfate reductase family KYK33_03975 PF00009 Elongation factor Tu GTP binding domain KYK33_03980 PF02080 TrkA-C domain KYK33_03980 PF03600 Citrate transporter KYK33_04025 PF00005 ABC transporter KYK33_04035 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) KYK33_04050 PF00719 Inorganic pyrophosphatase KYK33_04055 PF01225 Mur ligase family, catalytic domain KYK33_04055 PF02875 Mur ligase family, glutamate ligase domain KYK33_04055 PF08245 Mur ligase middle domain KYK33_04060 PF02441 Flavoprotein KYK33_04065 PF00440 Bacterial regulatory proteins, tetR family KYK33_04070 PF00156 Phosphoribosyl transferase domain KYK33_04075 PF00005 ABC transporter KYK33_04080 PF01061 ABC-2 type transporter KYK33_04090 PF02569 Pantoate-beta-alanine ligase KYK33_04095 PF02548 Ketopantoate hydroxymethyltransferase KYK33_04100 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KYK33_04105 PF01743 Poly A polymerase head domain KYK33_04105 PF12626 Polymerase A arginine-rich C-terminus KYK33_04105 PF12627 Probable RNA and SrmB- binding site of polymerase A KYK33_04110 PF00749 tRNA synthetases class I (E and Q), catalytic domain KYK33_04115 PF01258 Prokaryotic dksA/traR C4-type zinc finger KYK33_04120 PF03749 Sugar fermentation stimulation protein RE domain KYK33_04120 PF17746 SfsA N-terminal OB domain KYK33_04130 PF00270 DEAD/DEAH box helicase KYK33_04130 PF00271 Helicase conserved C-terminal domain KYK33_04130 PF08482 ATP-dependent helicase C-terminal KYK33_04130 PF04408 Helicase associated domain (HA2) KYK33_04135 PF00912 Transglycosylase KYK33_04135 PF14814 Bifunctional transglycosylase second domain KYK33_04135 PF00905 Penicillin binding protein transpeptidase domain KYK33_04140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KYK33_04155 PF00202 Aminotransferase class-III KYK33_04160 PF00654 Voltage gated chloride channel KYK33_04170 PF01521 Iron-sulphur cluster biosynthesis KYK33_04195 PF01810 LysE type translocator KYK33_04200 PF02954 Bacterial regulatory protein, Fis family KYK33_04205 PF01207 Dihydrouridine synthase (Dus) KYK33_04210 PF02321 Outer membrane efflux protein KYK33_04215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KYK33_04245 PF00072 Response regulator receiver domain KYK33_04250 PF00854 POT family KYK33_04255 PF00483 Nucleotidyl transferase KYK33_04265 PF00459 Inositol monophosphatase family KYK33_04270 PF03795 YCII-related domain KYK33_04275 PF04279 Intracellular septation protein A KYK33_04280 PF00282 Pyridoxal-dependent decarboxylase conserved domain KYK33_04285 PF03006 Haemolysin-III related KYK33_04290 PF02080 TrkA-C domain KYK33_04290 PF06826 Predicted Permease Membrane Region KYK33_04300 PF00313 'Cold-shock' DNA-binding domain KYK33_04310 PF00672 HAMP domain KYK33_04310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_04315 PF00749 tRNA synthetases class I (E and Q), catalytic domain KYK33_04320 PF00749 tRNA synthetases class I (E and Q), catalytic domain KYK33_04350 PF06483 Chitinase C KYK33_04350 PF00704 Glycosyl hydrolases family 18 KYK33_04355 PF01584 CheW-like domain KYK33_04355 PF00072 Response regulator receiver domain KYK33_04360 PF13472 GDSL-like Lipase/Acylhydrolase family KYK33_04365 PF00005 ABC transporter KYK33_04375 PF08338 Domain of unknown function (DUF1731) KYK33_04375 PF01370 NAD dependent epimerase/dehydratase family KYK33_04380 PF01515 Phosphate acetyl/butaryl transferase KYK33_04380 PF07085 DRTGG domain KYK33_04385 PF00871 Acetokinase family KYK33_04390 PF04217 Protein of unknown function, DUF412 KYK33_04395 PF03887 YfbU domain KYK33_04400 PF00578 AhpC/TSA family KYK33_04405 PF01842 ACT domain KYK33_04410 PF00701 Dihydrodipicolinate synthetase family KYK33_04415 PF06804 NlpB/DapX lipoprotein KYK33_04420 PF01259 SAICAR synthetase KYK33_04430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_04430 PF03466 LysR substrate binding domain KYK33_04435 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KYK33_04455 PF00989 PAS fold KYK33_04455 PF01627 Hpt domain KYK33_04455 PF18415 Histidine kinase receptor ArcB trans-membrane domain KYK33_04455 PF00072 Response regulator receiver domain KYK33_04455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_04455 PF00512 His Kinase A (phospho-acceptor) domain KYK33_04460 PF01966 HD domain KYK33_04460 PF13286 Phosphohydrolase-associated domain KYK33_04470 PF00672 HAMP domain KYK33_04470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_04485 PF02357 Transcription termination factor nusG KYK33_04490 PF03180 NLPA lipoprotein KYK33_04495 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_04500 PF00005 ABC transporter KYK33_04500 PF09383 NIL domain KYK33_04515 PF02472 Biopolymer transport protein ExbD/TolR KYK33_04520 PF01618 MotA/TolQ/ExbB proton channel family KYK33_04525 PF01618 MotA/TolQ/ExbB proton channel family KYK33_04535 PF00593 TonB dependent receptor KYK33_04535 PF07715 TonB-dependent Receptor Plug Domain KYK33_04540 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_04545 PF12911 N-terminal TM domain of oligopeptide transport permease C KYK33_04545 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_04550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KYK33_04555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KYK33_04555 PF00005 ABC transporter KYK33_04560 PF00005 ABC transporter KYK33_04560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KYK33_04565 PF07687 Peptidase dimerisation domain KYK33_04565 PF01546 Peptidase family M20/M25/M40 KYK33_04610 PF07484 Phage Tail Collar Domain KYK33_04720 PF00717 Peptidase S24-like KYK33_04725 PF13438 Domain of unknown function (DUF4113) KYK33_04725 PF00817 impB/mucB/samB family KYK33_04725 PF11799 impB/mucB/samB family C-terminal domain KYK33_04725 PF11798 IMS family HHH motif KYK33_04750 PF05840 Bacteriophage replication gene A protein (GPA) KYK33_04765 PF07669 Eco57I restriction-modification methylase KYK33_04765 PF12950 TaqI-like C-terminal specificity domain KYK33_04820 PF00533 BRCA1 C Terminus (BRCT) domain KYK33_04820 PF03120 NAD-dependent DNA ligase OB-fold domain KYK33_04820 PF01653 NAD-dependent DNA ligase adenylation domain KYK33_04820 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KYK33_04820 PF12826 Helix-hairpin-helix motif KYK33_04830 PF02899 Phage integrase, N-terminal SAM-like domain KYK33_04830 PF00589 Phage integrase family KYK33_04835 PF00156 Phosphoribosyl transferase domain KYK33_04840 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) KYK33_04845 PF07417 Sigma factor-binding transcriptional regulator Crl KYK33_04850 PF01472 PUA domain KYK33_04850 PF00696 Amino acid kinase family KYK33_04855 PF00171 Aldehyde dehydrogenase family KYK33_04860 PF00582 Universal stress protein family KYK33_04875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KYK33_04875 PF00384 Molybdopterin oxidoreductase KYK33_04875 PF01568 Molydopterin dinucleotide binding domain KYK33_04875 PF04324 BFD-like [2Fe-2S] binding domain KYK33_04880 PF10414 Sirohaem synthase dimerisation region KYK33_04880 PF14824 Sirohaem biosynthesis protein central KYK33_04880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KYK33_04890 PF00005 ABC transporter KYK33_04895 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_04900 PF00005 ABC transporter KYK33_04905 PF04324 BFD-like [2Fe-2S] binding domain KYK33_04905 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KYK33_04905 PF18267 Rubredoxin NAD+ reductase C-terminal domain KYK33_04905 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KYK33_04905 PF07992 Pyridine nucleotide-disulphide oxidoreductase KYK33_04905 PF13806 Rieske-like [2Fe-2S] domain KYK33_04910 PF18267 Rubredoxin NAD+ reductase C-terminal domain KYK33_04910 PF07992 Pyridine nucleotide-disulphide oxidoreductase KYK33_04910 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KYK33_04910 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KYK33_04910 PF13806 Rieske-like [2Fe-2S] domain KYK33_04910 PF04324 BFD-like [2Fe-2S] binding domain KYK33_04915 PF00294 pfkB family carbohydrate kinase KYK33_04920 PF04227 Indigoidine synthase A like protein KYK33_04960 PF00550 Phosphopantetheine attachment site KYK33_04970 PF13193 AMP-binding enzyme C-terminal domain KYK33_04970 PF00501 AMP-binding enzyme KYK33_04980 PF00221 Aromatic amino acid lyase KYK33_05005 PF00109 Beta-ketoacyl synthase, N-terminal domain KYK33_05005 PF02801 Beta-ketoacyl synthase, C-terminal domain KYK33_05020 PF00109 Beta-ketoacyl synthase, N-terminal domain KYK33_05020 PF02801 Beta-ketoacyl synthase, C-terminal domain KYK33_05025 PF00994 Probable molybdopterin binding domain KYK33_05035 PF06738 Putative threonine/serine exporter KYK33_05040 PF12821 Threonine/Serine exporter, ThrE KYK33_05045 PF00186 Dihydrofolate reductase KYK33_05050 PF00149 Calcineurin-like phosphoesterase KYK33_05055 PF04379 ApaG domain KYK33_05060 PF00398 Ribosomal RNA adenine dimethylase KYK33_05065 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KYK33_05070 PF00639 PPIC-type PPIASE domain KYK33_05070 PF09312 SurA N-terminal domain KYK33_05075 PF04453 LPS transport system D KYK33_05075 PF03968 OstA-like protein KYK33_05080 PF01636 Phosphotransferase enzyme family KYK33_05085 PF00483 Nucleotidyl transferase KYK33_05090 PF00226 DnaJ domain KYK33_05090 PF05099 Tellurite resistance protein TerB KYK33_05095 PF00860 Permease family KYK33_05105 PF00005 ABC transporter KYK33_05105 PF12848 ABC transporter KYK33_05110 PF01464 Transglycosylase SLT domain KYK33_05125 PF00005 ABC transporter KYK33_05130 PF01032 FecCD transport family KYK33_05140 PF06228 Haem utilisation ChuX/HutX KYK33_05145 PF01243 Pyridoxamine 5'-phosphate oxidase KYK33_05165 PF00593 TonB dependent receptor KYK33_05165 PF07715 TonB-dependent Receptor Plug Domain KYK33_05170 PF12832 MFS_1 like family KYK33_05175 PF00512 His Kinase A (phospho-acceptor) domain KYK33_05175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_05180 PF00704 Glycosyl hydrolases family 18 KYK33_05180 PF08329 Chitinase A, N-terminal domain KYK33_05185 PF08241 Methyltransferase domain KYK33_05190 PF00027 Cyclic nucleotide-binding domain KYK33_05190 PF13545 Crp-like helix-turn-helix domain KYK33_05195 PF02566 OsmC-like protein KYK33_05200 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme KYK33_05210 PF00485 Phosphoribulokinase / Uridine kinase family KYK33_05215 PF06794 Uncharacterised protein family (UPF0270) KYK33_05220 PF00990 Diguanylate cyclase, GGDEF domain KYK33_05220 PF00563 EAL domain KYK33_05220 PF01590 GAF domain KYK33_05220 PF00360 Phytochrome region KYK33_05225 PF00561 alpha/beta hydrolase fold KYK33_05230 PF00072 Response regulator receiver domain KYK33_05230 PF01584 CheW-like domain KYK33_05240 PF09526 Probable metal-binding protein (DUF2387) KYK33_05245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KYK33_05250 PF04102 SlyX KYK33_05260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KYK33_05260 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KYK33_05265 PF02954 Bacterial regulatory protein, Fis family KYK33_05265 PF00072 Response regulator receiver domain KYK33_05265 PF00158 Sigma-54 interaction domain KYK33_05285 PF02872 5'-nucleotidase, C-terminal domain KYK33_05285 PF00149 Calcineurin-like phosphoesterase KYK33_05290 PF03616 Sodium/glutamate symporter KYK33_05295 PF00710 Asparaginase, N-terminal KYK33_05295 PF17763 Glutaminase/Asparaginase C-terminal domain KYK33_05300 PF07023 Protein of unknown function (DUF1315) KYK33_05305 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KYK33_05305 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KYK33_05315 PF09297 NADH pyrophosphatase zinc ribbon domain KYK33_05315 PF00293 NUDIX domain KYK33_05315 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain KYK33_05320 PF01343 Peptidase family S49 KYK33_05325 PF07992 Pyridine nucleotide-disulphide oxidoreductase KYK33_05325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KYK33_05335 PF00881 Nitroreductase family KYK33_05340 PF12464 Maltose acetyltransferase KYK33_05340 PF14602 Hexapeptide repeat of succinyl-transferase KYK33_05350 PF08240 Alcohol dehydrogenase GroES-like domain KYK33_05350 PF00107 Zinc-binding dehydrogenase KYK33_05355 PF03466 LysR substrate binding domain KYK33_05355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_05360 PF02378 Phosphotransferase system, EIIC KYK33_05360 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KYK33_05360 PF00367 phosphotransferase system, EIIB KYK33_05365 PF00474 Sodium:solute symporter family KYK33_05380 PF06196 Protein of unknown function (DUF997) KYK33_05385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KYK33_05385 PF00289 Biotin carboxylase, N-terminal domain KYK33_05385 PF02785 Biotin carboxylase C-terminal domain KYK33_05390 PF00364 Biotin-requiring enzyme KYK33_05395 PF01220 Dehydroquinase class II KYK33_05400 PF16177 Acetyl-coenzyme A synthetase N-terminus KYK33_05400 PF13193 AMP-binding enzyme C-terminal domain KYK33_05400 PF00501 AMP-binding enzyme KYK33_05410 PF02613 Nitrate reductase delta subunit KYK33_05415 PF18364 Molybdopterin oxidoreductase N-terminal domain KYK33_05415 PF00384 Molybdopterin oxidoreductase KYK33_05415 PF01568 Molydopterin dinucleotide binding domain KYK33_05420 PF03264 NapC/NirT cytochrome c family, N-terminal region KYK33_05425 PF00072 Response regulator receiver domain KYK33_05425 PF00486 Transcriptional regulatory protein, C terminal KYK33_05440 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KYK33_05445 PF00512 His Kinase A (phospho-acceptor) domain KYK33_05445 PF00672 HAMP domain KYK33_05445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_05445 PF01627 Hpt domain KYK33_05445 PF00072 Response regulator receiver domain KYK33_05455 PF00464 Serine hydroxymethyltransferase KYK33_05465 PF03477 ATP cone domain KYK33_05470 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KYK33_05470 PF01872 RibD C-terminal domain KYK33_05475 PF00677 Lumazine binding domain KYK33_05480 PF00925 GTP cyclohydrolase II KYK33_05480 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KYK33_05485 PF00885 6,7-dimethyl-8-ribityllumazine synthase KYK33_05490 PF01029 NusB family KYK33_05495 PF00586 AIR synthase related protein, N-terminal domain KYK33_05495 PF02769 AIR synthase related protein, C-terminal domain KYK33_05500 PF04608 Phosphatidylglycerophosphatase A KYK33_05505 PF00005 ABC transporter KYK33_05505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KYK33_05510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KYK33_05515 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_05520 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_05520 PF12911 N-terminal TM domain of oligopeptide transport permease C KYK33_05525 PF02780 Transketolase, C-terminal domain KYK33_05525 PF02779 Transketolase, pyrimidine binding domain KYK33_05525 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KYK33_05530 PF00348 Polyprenyl synthetase KYK33_05535 PF02609 Exonuclease VII small subunit KYK33_05540 PF01618 MotA/TolQ/ExbB proton channel family KYK33_05545 PF13677 Membrane MotB of proton-channel complex MotA/MotB KYK33_05545 PF00691 OmpA family KYK33_05550 PF03449 Transcription elongation factor, N-terminal KYK33_05550 PF01272 Transcription elongation factor, GreA/GreB, C-term KYK33_05560 PF01985 CRS1 / YhbY (CRM) domain KYK33_05565 PF01728 FtsJ-like methyltransferase KYK33_05570 PF01434 Peptidase family M41 KYK33_05570 PF00004 ATPase family associated with various cellular activities (AAA) KYK33_05570 PF17862 AAA+ lid domain KYK33_05570 PF06480 FtsH Extracellular KYK33_05575 PF00809 Pterin binding enzyme KYK33_05580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KYK33_05580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KYK33_05580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KYK33_05580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KYK33_05585 PF00121 Triosephosphate isomerase KYK33_05590 PF03840 Preprotein translocase SecG subunit KYK33_05605 PF17384 RimP C-terminal SH3 domain KYK33_05605 PF02576 RimP N-terminal domain KYK33_05610 PF13184 NusA-like KH domain KYK33_05610 PF08529 NusA N-terminal domain KYK33_05610 PF00575 S1 RNA binding domain KYK33_05615 PF00009 Elongation factor Tu GTP binding domain KYK33_05615 PF11987 Translation-initiation factor 2 KYK33_05615 PF08364 Bacterial translation initiation factor IF-2 associated region KYK33_05615 PF04760 Translation initiation factor IF-2, N-terminal region KYK33_05620 PF02033 Ribosome-binding factor A KYK33_05625 PF01509 TruB family pseudouridylate synthase (N terminal domain) KYK33_05625 PF16198 tRNA pseudouridylate synthase B C-terminal domain KYK33_05625 PF09157 Pseudouridine synthase II TruB, C-terminal KYK33_05630 PF00312 Ribosomal protein S15 KYK33_05635 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KYK33_05635 PF01138 3' exoribonuclease family, domain 1 KYK33_05635 PF03725 3' exoribonuclease family, domain 2 KYK33_05635 PF00575 S1 RNA binding domain KYK33_05635 PF00013 KH domain KYK33_05640 PF07690 Major Facilitator Superfamily KYK33_05645 PF00672 HAMP domain KYK33_05645 PF12729 Four helix bundle sensory module for signal transduction KYK33_05645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_05650 PF02635 DsrE/DsrF-like family KYK33_05660 PF12838 4Fe-4S dicluster domain KYK33_05665 PF16325 Peptidase family U32 C-terminal domain KYK33_05665 PF01136 Peptidase family U32 KYK33_05690 PF00266 Aminotransferase class-V KYK33_05695 PF01339 CheB methylesterase KYK33_05695 PF00072 Response regulator receiver domain KYK33_05700 PF03975 CheD chemotactic sensory transduction KYK33_05705 PF01739 CheR methyltransferase, SAM binding domain KYK33_05705 PF03705 CheR methyltransferase, all-alpha domain KYK33_05710 PF00672 HAMP domain KYK33_05710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_05715 PF01584 CheW-like domain KYK33_05720 PF12729 Four helix bundle sensory module for signal transduction KYK33_05720 PF00672 HAMP domain KYK33_05720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_05725 PF01627 Hpt domain KYK33_05725 PF02895 Signal transducing histidine kinase, homodimeric domain KYK33_05725 PF01584 CheW-like domain KYK33_05725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_05725 PF07194 P2 response regulator binding domain KYK33_05735 PF00072 Response regulator receiver domain KYK33_05740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_05740 PF00672 HAMP domain KYK33_05740 PF02743 Cache domain KYK33_05745 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KYK33_05745 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KYK33_05750 PF03466 LysR substrate binding domain KYK33_05750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_05755 PF01810 LysE type translocator KYK33_05765 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KYK33_05765 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KYK33_05770 PF00730 HhH-GPD superfamily base excision DNA repair protein KYK33_05770 PF12833 Helix-turn-helix domain KYK33_05770 PF02805 Metal binding domain of Ada KYK33_05770 PF06029 AlkA N-terminal domain KYK33_05775 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KYK33_05795 PF00106 short chain dehydrogenase KYK33_05800 PF03573 outer membrane porin, OprD family KYK33_05805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_05810 PF00892 EamA-like transporter family KYK33_05815 PF02447 GntP family permease KYK33_05820 PF01370 NAD dependent epimerase/dehydratase family KYK33_05825 PF01261 Xylose isomerase-like TIM barrel KYK33_05830 PF00596 Class II Aldolase and Adducin N-terminal domain KYK33_05835 PF17042 Nucleotide-binding C-terminal domain KYK33_05835 PF07005 Sugar-binding N-terminal domain KYK33_05840 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KYK33_05840 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KYK33_05845 PF08220 DeoR-like helix-turn-helix domain KYK33_05845 PF00455 DeoR C terminal sensor domain KYK33_05850 PF03976 Polyphosphate kinase 2 (PPK2) KYK33_05860 PF07995 Glucose / Sorbosone dehydrogenase KYK33_05865 PF00793 DAHP synthetase I family KYK33_05870 PF08021 Siderophore-interacting FAD-binding domain KYK33_05870 PF04954 Siderophore-interacting protein KYK33_05875 PF00425 chorismate binding enzyme KYK33_05880 PF13193 AMP-binding enzyme C-terminal domain KYK33_05880 PF00501 AMP-binding enzyme KYK33_05885 PF00550 Phosphopantetheine attachment site KYK33_05885 PF00857 Isochorismatase family KYK33_05890 PF00550 Phosphopantetheine attachment site KYK33_05890 PF00668 Condensation domain KYK33_05890 PF13193 AMP-binding enzyme C-terminal domain KYK33_05890 PF00501 AMP-binding enzyme KYK33_05890 PF00975 Thioesterase domain KYK33_05900 PF00550 Phosphopantetheine attachment site KYK33_05900 PF00668 Condensation domain KYK33_05900 PF13193 AMP-binding enzyme C-terminal domain KYK33_05900 PF07993 Male sterility protein KYK33_05900 PF00501 AMP-binding enzyme KYK33_05905 PF14765 Polyketide synthase dehydratase KYK33_05905 PF00550 Phosphopantetheine attachment site KYK33_05905 PF08659 KR domain KYK33_05905 PF02801 Beta-ketoacyl synthase, C-terminal domain KYK33_05905 PF16197 Ketoacyl-synthetase C-terminal extension KYK33_05905 PF00668 Condensation domain KYK33_05905 PF13193 AMP-binding enzyme C-terminal domain KYK33_05905 PF00501 AMP-binding enzyme KYK33_05905 PF00109 Beta-ketoacyl synthase, N-terminal domain KYK33_05910 PF01497 Periplasmic binding protein KYK33_05915 PF01648 4'-phosphopantetheinyl transferase superfamily KYK33_05915 PF17837 4'-phosphopantetheinyl transferase N-terminal domain KYK33_05920 PF00005 ABC transporter KYK33_05925 PF01032 FecCD transport family KYK33_05930 PF01032 FecCD transport family KYK33_05935 PF07715 TonB-dependent Receptor Plug Domain KYK33_05935 PF00593 TonB dependent receptor KYK33_05945 PF16385 Domain of unknown function KYK33_05945 PF00884 Sulfatase KYK33_05950 PF04055 Radical SAM superfamily KYK33_05950 PF13186 Iron-sulfur cluster-binding domain KYK33_05955 PF17863 AAA lid domain KYK33_05955 PF07726 ATPase family associated with various cellular activities (AAA) KYK33_06010 PF01817 Chorismate mutase type II KYK33_06010 PF00800 Prephenate dehydratase KYK33_06035 PF13411 MerR HTH family regulatory protein KYK33_06040 PF00875 DNA photolyase KYK33_06040 PF03441 FAD binding domain of DNA photolyase KYK33_06050 PF00106 short chain dehydrogenase KYK33_06055 PF01593 Flavin containing amine oxidoreductase KYK33_06055 PF02027 RolB/RolC glucosidase family KYK33_06090 PF00210 Ferritin-like domain KYK33_06095 PF03063 Prismane/CO dehydrogenase family KYK33_06100 PF00970 Oxidoreductase FAD-binding domain KYK33_06100 PF00175 Oxidoreductase NAD-binding domain KYK33_06100 PF00042 Globin KYK33_06105 PF16363 GDP-mannose 4,6 dehydratase KYK33_06110 PF13462 Thioredoxin KYK33_06110 PF06965 Na+/H+ antiporter 1 KYK33_06125 PF02463 RecF/RecN/SMC N terminal domain KYK33_06140 PF02384 N-6 DNA Methylase KYK33_06145 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A KYK33_06180 PF04002 RadC-like JAB domain KYK33_06220 PF05930 Prophage CP4-57 regulatory protein (AlpA) KYK33_06225 PF00816 H-NS histone family KYK33_06245 PF13356 Arm DNA-binding domain KYK33_06245 PF00589 Phage integrase family KYK33_06250 PF04794 YdjC-like protein KYK33_06255 PF11975 Family 4 glycosyl hydrolase C-terminal domain KYK33_06255 PF02056 Family 4 glycosyl hydrolase KYK33_06260 PF07883 Cupin domain KYK33_06260 PF12833 Helix-turn-helix domain KYK33_06265 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KYK33_06270 PF00232 Glycosyl hydrolase family 1 KYK33_06275 PF02378 Phosphotransferase system, EIIC KYK33_06280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KYK33_06285 PF00709 Adenylosuccinate synthetase KYK33_06290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_06290 PF03466 LysR substrate binding domain KYK33_06300 PF00155 Aminotransferase class I and II KYK33_06305 PF07690 Major Facilitator Superfamily KYK33_06310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_06310 PF03466 LysR substrate binding domain KYK33_06315 PF00106 short chain dehydrogenase KYK33_06320 PF01343 Peptidase family S49 KYK33_06320 PF08496 Peptidase family S49 N-terminal KYK33_06325 PF04996 Succinylarginine dihydrolase KYK33_06330 PF08272 Topoisomerase I zinc-ribbon-like KYK33_06330 PF01131 DNA topoisomerase KYK33_06330 PF01751 Toprim domain KYK33_06330 PF01396 Topoisomerase DNA binding C4 zinc finger KYK33_06345 PF08447 PAS fold KYK33_06345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_06350 PF00728 Glycosyl hydrolase family 20, catalytic domain KYK33_06350 PF02838 Glycosyl hydrolase family 20, domain 2 KYK33_06355 PF01869 BadF/BadG/BcrA/BcrD ATPase family KYK33_06365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KYK33_06365 PF00005 ABC transporter KYK33_06370 PF00005 ABC transporter KYK33_06370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KYK33_06375 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_06375 PF12911 N-terminal TM domain of oligopeptide transport permease C KYK33_06380 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_06385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KYK33_06390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KYK33_06395 PF17149 Periplasmic sensor domain found in signal transduction proteins KYK33_06395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_06395 PF00512 His Kinase A (phospho-acceptor) domain KYK33_06395 PF01627 Hpt domain KYK33_06395 PF00072 Response regulator receiver domain KYK33_06395 PF00672 HAMP domain KYK33_06415 PF10725 Protein of unknown function (DUF2517) KYK33_06425 PF05114 Protein of unknown function (DUF692) KYK33_06440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KYK33_06440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KYK33_06455 PF04632 Fusaric acid resistance protein family KYK33_06460 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KYK33_06465 PF12804 MobA-like NTP transferase domain KYK33_06470 PF06736 Protein of unknown function (DUF1211) KYK33_06475 PF00390 Malic enzyme, N-terminal domain KYK33_06475 PF03949 Malic enzyme, NAD binding domain KYK33_06480 PF00860 Permease family KYK33_06495 PF10282 Lactonase, 7-bladed beta-propeller KYK33_06510 PF00005 ABC transporter KYK33_06515 PF02653 Branched-chain amino acid transport system / permease component KYK33_06520 PF00933 Glycosyl hydrolase family 3 N terminal domain KYK33_06520 PF01915 Glycosyl hydrolase family 3 C-terminal domain KYK33_06530 PF01810 LysE type translocator KYK33_06535 PF12795 Mechanosensitive ion channel porin domain KYK33_06535 PF00924 Mechanosensitive ion channel KYK33_06535 PF12794 Mechanosensitive ion channel inner membrane domain 1 KYK33_06540 PF00224 Pyruvate kinase, barrel domain KYK33_06540 PF02887 Pyruvate kinase, alpha/beta domain KYK33_06570 PF02954 Bacterial regulatory protein, Fis family KYK33_06570 PF00072 Response regulator receiver domain KYK33_06570 PF00158 Sigma-54 interaction domain KYK33_06585 PF13472 GDSL-like Lipase/Acylhydrolase family KYK33_06590 PF04381 Putative exonuclease, RdgC KYK33_06600 PF00149 Calcineurin-like phosphoesterase KYK33_06600 PF12320 Type 5 capsule protein repressor C-terminal domain KYK33_06605 PF13476 AAA domain KYK33_06610 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KYK33_06615 PF05524 PEP-utilising enzyme, N-terminal KYK33_06615 PF00391 PEP-utilising enzyme, mobile domain KYK33_06615 PF02896 PEP-utilising enzyme, TIM barrel domain KYK33_06620 PF00381 PTS HPr component phosphorylation site KYK33_06625 PF00291 Pyridoxal-phosphate dependent enzyme KYK33_06630 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KYK33_06630 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KYK33_06635 PF18389 TrmO C-terminal domain KYK33_06635 PF01980 tRNA-methyltransferase O KYK33_06650 PF00664 ABC transporter transmembrane region KYK33_06650 PF00005 ABC transporter KYK33_06655 PF00664 ABC transporter transmembrane region KYK33_06655 PF00005 ABC transporter KYK33_06670 PF00072 Response regulator receiver domain KYK33_06670 PF00486 Transcriptional regulatory protein, C terminal KYK33_06675 PF03737 Aldolase/RraA KYK33_06690 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) KYK33_06695 PF00588 SpoU rRNA Methylase family KYK33_06700 PF00742 Homoserine dehydrogenase KYK33_06700 PF13840 ACT domain KYK33_06700 PF03447 Homoserine dehydrogenase, NAD binding domain KYK33_06700 PF00696 Amino acid kinase family KYK33_06700 PF01842 ACT domain KYK33_06705 PF00288 GHMP kinases N terminal domain KYK33_06705 PF08544 GHMP kinases C terminal KYK33_06710 PF14821 Threonine synthase N terminus KYK33_06710 PF00291 Pyridoxal-phosphate dependent enzyme KYK33_06715 PF13474 SnoaL-like domain KYK33_06720 PF00005 ABC transporter KYK33_06720 PF16326 ABC transporter C-terminal domain KYK33_06750 PF02028 BCCT, betaine/carnitine/choline family transporter KYK33_06755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_06755 PF03466 LysR substrate binding domain KYK33_06775 PF17969 L,D-transpeptidase C-terminal domain KYK33_06775 PF01476 LysM domain KYK33_06775 PF03734 L,D-transpeptidase catalytic domain KYK33_06790 PF04303 PrpF protein KYK33_06795 PF00330 Aconitase family (aconitate hydratase) KYK33_06795 PF00694 Aconitase C-terminal domain KYK33_06800 PF00330 Aconitase family (aconitate hydratase) KYK33_06800 PF00694 Aconitase C-terminal domain KYK33_06805 PF00285 Citrate synthase, C-terminal domain KYK33_06820 PF02321 Outer membrane efflux protein KYK33_06825 PF00005 ABC transporter KYK33_06825 PF02687 FtsX-like permease family KYK33_06825 PF12704 MacB-like periplasmic core domain KYK33_06830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KYK33_06835 PF01368 DHH family KYK33_06835 PF02833 DHHA2 domain KYK33_06840 PF02463 RecF/RecN/SMC N terminal domain KYK33_06845 PF00990 Diguanylate cyclase, GGDEF domain KYK33_06845 PF17158 Membrane-associated sensor, integral membrane domain KYK33_06850 PF01513 ATP-NAD kinase KYK33_06855 PF01025 GrpE KYK33_06860 PF00012 Hsp70 protein KYK33_06865 PF00684 DnaJ central domain KYK33_06865 PF01556 DnaJ C terminal domain KYK33_06865 PF00226 DnaJ domain KYK33_06870 PF11471 Maltoporin periplasmic N-terminal extension KYK33_06870 PF02264 LamB porin KYK33_06875 PF00294 pfkB family carbohydrate kinase KYK33_06880 PF00367 phosphotransferase system, EIIB KYK33_06880 PF02378 Phosphotransferase system, EIIC KYK33_06885 PF08244 Glycosyl hydrolases family 32 C terminal KYK33_06885 PF00251 Glycosyl hydrolases family 32 N-terminal domain KYK33_06890 PF00356 Bacterial regulatory proteins, lacI family KYK33_06890 PF13407 Periplasmic binding protein domain KYK33_06895 PF04143 Sulphur transport KYK33_06905 PF03099 Biotin/lipoate A/B protein ligase family KYK33_06905 PF10437 Bacterial lipoate protein ligase C-terminus KYK33_06915 PF00873 AcrB/AcrD/AcrF family KYK33_06920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KYK33_06930 PF03372 Endonuclease/Exonuclease/phosphatase family KYK33_06940 PF02424 ApbE family KYK33_06945 PF00127 Copper binding proteins, plastocyanin/azurin family KYK33_06970 PF01156 Inosine-uridine preferring nucleoside hydrolase KYK33_06975 PF05656 Protein of unknown function (DUF805) KYK33_06980 PF03466 LysR substrate binding domain KYK33_06980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_06985 PF02627 Carboxymuconolactone decarboxylase family KYK33_06990 PF06481 COX Aromatic Rich Motif KYK33_06990 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KYK33_06995 PF00115 Cytochrome C and Quinol oxidase polypeptide I KYK33_07000 PF00510 Cytochrome c oxidase subunit III KYK33_07005 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KYK33_07010 PF01040 UbiA prenyltransferase family KYK33_07015 PF07690 Major Facilitator Superfamily KYK33_07020 PF07237 Protein of unknown function (DUF1428) KYK33_07035 PF07804 HipA-like C-terminal domain KYK33_07035 PF13657 HipA N-terminal domain KYK33_07040 PF01381 Helix-turn-helix KYK33_07060 PF00290 Tryptophan synthase alpha chain KYK33_07065 PF00291 Pyridoxal-phosphate dependent enzyme KYK33_07070 PF00218 Indole-3-glycerol phosphate synthase KYK33_07070 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KYK33_07075 PF02885 Glycosyl transferase family, helical bundle domain KYK33_07075 PF00591 Glycosyl transferase family, a/b domain KYK33_07080 PF00591 Glycosyl transferase family, a/b domain KYK33_07080 PF00117 Glutamine amidotransferase class-I KYK33_07080 PF02885 Glycosyl transferase family, helical bundle domain KYK33_07090 PF04715 Anthranilate synthase component I, N terminal region KYK33_07090 PF00425 chorismate binding enzyme KYK33_07095 PF02811 PHP domain KYK33_07100 PF01300 Telomere recombination KYK33_07105 PF02616 Segregation and condensation protein ScpA KYK33_07110 PF04079 Segregation and condensation complex subunit ScpB KYK33_07115 PF00849 RNA pseudouridylate synthase KYK33_07115 PF01479 S4 domain KYK33_07140 PF00440 Bacterial regulatory proteins, tetR family KYK33_07140 PF08361 MAATS-type transcriptional repressor, C-terminal region KYK33_07145 PF00529 HlyD membrane-fusion protein of T1SS KYK33_07145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KYK33_07150 PF00873 AcrB/AcrD/AcrF family KYK33_07160 PF01668 SmpB protein KYK33_07165 PF03364 Polyketide cyclase / dehydrase and lipid transport KYK33_07170 PF03658 RnfH family Ubiquitin KYK33_07175 PF13460 NAD(P)H-binding KYK33_07180 PF04355 SmpA / OmlA family KYK33_07185 PF01048 Phosphorylase superfamily KYK33_07190 PF00849 RNA pseudouridylate synthase KYK33_07205 PF07509 Protein of unknown function (DUF1523) KYK33_07210 PF12729 Four helix bundle sensory module for signal transduction KYK33_07210 PF00672 HAMP domain KYK33_07210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_07215 PF01810 LysE type translocator KYK33_07220 PF03471 Transporter associated domain KYK33_07220 PF00999 Sodium/hydrogen exchanger family KYK33_07220 PF02080 TrkA-C domain KYK33_07230 PF03471 Transporter associated domain KYK33_07230 PF00999 Sodium/hydrogen exchanger family KYK33_07230 PF02080 TrkA-C domain KYK33_07240 PF02557 D-alanyl-D-alanine carboxypeptidase KYK33_07245 PF01546 Peptidase family M20/M25/M40 KYK33_07245 PF07687 Peptidase dimerisation domain KYK33_07250 PF03960 ArsC family KYK33_07255 PF03466 LysR substrate binding domain KYK33_07255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_07270 PF03605 Anaerobic c4-dicarboxylate membrane transporter KYK33_07280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KYK33_07285 PF00106 short chain dehydrogenase KYK33_07290 PF00107 Zinc-binding dehydrogenase KYK33_07290 PF08240 Alcohol dehydrogenase GroES-like domain KYK33_07295 PF00152 tRNA synthetases class II (D, K and N) KYK33_07295 PF01336 OB-fold nucleic acid binding domain KYK33_07310 PF00202 Aminotransferase class-III KYK33_07315 PF04055 Radical SAM superfamily KYK33_07315 PF06968 Biotin and Thiamin Synthesis associated domain KYK33_07320 PF00155 Aminotransferase class I and II KYK33_07325 PF08241 Methyltransferase domain KYK33_07335 PF01435 Peptidase family M48 KYK33_07340 PF00970 Oxidoreductase FAD-binding domain KYK33_07340 PF00111 2Fe-2S iron-sulfur cluster binding domain KYK33_07340 PF00175 Oxidoreductase NAD-binding domain KYK33_07355 PF01554 MatE KYK33_07375 PF00291 Pyridoxal-phosphate dependent enzyme KYK33_07380 PF00171 Aldehyde dehydrogenase family KYK33_07390 PF00877 NlpC/P60 family KYK33_07395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_07395 PF03466 LysR substrate binding domain KYK33_07415 PF08003 Protein of unknown function (DUF1698) KYK33_07420 PF13649 Methyltransferase domain KYK33_07425 PF01904 Protein of unknown function DUF72 KYK33_07430 PF02938 GAD domain KYK33_07430 PF00152 tRNA synthetases class II (D, K and N) KYK33_07430 PF01336 OB-fold nucleic acid binding domain KYK33_07435 PF01709 Transcriptional regulator KYK33_07440 PF08019 Phosphoethanolamine transferase EptA/EptB KYK33_07440 PF00884 Sulfatase KYK33_07445 PF01047 MarR family KYK33_07445 PF00480 ROK family KYK33_07450 PF01979 Amidohydrolase family KYK33_07455 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KYK33_07460 PF00367 phosphotransferase system, EIIB KYK33_07460 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KYK33_07460 PF02378 Phosphotransferase system, EIIC KYK33_07465 PF00728 Glycosyl hydrolase family 20, catalytic domain KYK33_07465 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain KYK33_07465 PF03173 Putative carbohydrate binding domain KYK33_07465 PF02838 Glycosyl hydrolase family 20, domain 2 KYK33_07480 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KYK33_07480 PF00034 Cytochrome c KYK33_07480 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KYK33_07485 PF00111 2Fe-2S iron-sulfur cluster binding domain KYK33_07485 PF01799 [2Fe-2S] binding domain KYK33_07490 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KYK33_07490 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KYK33_07495 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KYK33_07495 PF00749 tRNA synthetases class I (E and Q), catalytic domain KYK33_07500 PF01475 Ferric uptake regulator family KYK33_07510 PF00258 Flavodoxin KYK33_07515 PF01402 Ribbon-helix-helix protein, copG family KYK33_07525 PF12697 Alpha/beta hydrolase family KYK33_07530 PF17206 SeqA protein N-terminal domain KYK33_07530 PF03925 SeqA protein C-terminal domain KYK33_07535 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KYK33_07535 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KYK33_07535 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KYK33_07535 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KYK33_07545 PF01047 MarR family KYK33_07550 PF13406 Transglycosylase SLT domain KYK33_07555 PF01066 CDP-alcohol phosphatidyltransferase KYK33_07560 PF00005 ABC transporter KYK33_07565 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_07570 PF13416 Bacterial extracellular solute-binding protein KYK33_07575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KYK33_07575 PF00403 Heavy-metal-associated domain KYK33_07575 PF07992 Pyridine nucleotide-disulphide oxidoreductase KYK33_07580 PF02627 Carboxymuconolactone decarboxylase family KYK33_07600 PF01103 Surface antigen KYK33_07600 PF07244 Surface antigen variable number repeat KYK33_07600 PF17243 POTRA domain TamA domain 1 KYK33_07605 PF04357 TamB, inner membrane protein subunit of TAM complex KYK33_07615 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KYK33_07620 PF00563 EAL domain KYK33_07620 PF00990 Diguanylate cyclase, GGDEF domain KYK33_07620 PF03707 Bacterial signalling protein N terminal repeat KYK33_07625 PF14718 Soluble lytic murein transglycosylase L domain KYK33_07625 PF01464 Transglycosylase SLT domain KYK33_07630 PF00356 Bacterial regulatory proteins, lacI family KYK33_07635 PF01370 NAD dependent epimerase/dehydratase family KYK33_07640 PF03061 Thioesterase superfamily KYK33_07650 PF03372 Endonuclease/Exonuclease/phosphatase family KYK33_07660 PF01464 Transglycosylase SLT domain KYK33_07660 PF01476 LysM domain KYK33_07665 PF16123 Hydroxyacylglutathione hydrolase C-terminus KYK33_07665 PF00753 Metallo-beta-lactamase superfamily KYK33_07670 PF08241 Methyltransferase domain KYK33_07675 PF00075 RNase H KYK33_07680 PF00929 Exonuclease KYK33_07690 PF11849 Domain of unknown function (DUF3369) KYK33_07695 PF09317 Domain of unknown function (DUF1974) KYK33_07695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KYK33_07695 PF02770 Acyl-CoA dehydrogenase, middle domain KYK33_07695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KYK33_07700 PF13580 SIS domain KYK33_07705 PF13230 Glutamine amidotransferases class-II KYK33_07710 PF00551 Formyl transferase KYK33_07715 PF00586 AIR synthase related protein, N-terminal domain KYK33_07715 PF02769 AIR synthase related protein, C-terminal domain KYK33_07730 PF00308 Bacterial dnaA protein KYK33_07735 PF00463 Isocitrate lyase family KYK33_07740 PF01274 Malate synthase KYK33_07750 PF14437 MafB19-like deaminase KYK33_07755 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_07760 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_07765 PF00005 ABC transporter KYK33_07770 PF01895 PhoU domain KYK33_07775 PF12852 Cupin KYK33_07775 PF12833 Helix-turn-helix domain KYK33_07780 PF01588 Putative tRNA binding domain KYK33_07785 PF01595 Cyclin M transmembrane N-terminal domain KYK33_07785 PF00571 CBS domain KYK33_07785 PF03471 Transporter associated domain KYK33_07800 PF13520 Amino acid permease KYK33_07805 PF00005 ABC transporter KYK33_07810 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_07815 PF00497 Bacterial extracellular solute-binding proteins, family 3 KYK33_07820 PF00990 Diguanylate cyclase, GGDEF domain KYK33_07825 PF14760 Rnk N-terminus KYK33_07825 PF01272 Transcription elongation factor, GreA/GreB, C-term KYK33_07840 PF00245 Alkaline phosphatase KYK33_07850 PF01926 50S ribosome-binding GTPase KYK33_07855 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KYK33_07860 PF13307 Helicase C-terminal domain KYK33_07860 PF06733 DEAD_2 KYK33_07875 PF00155 Aminotransferase class I and II KYK33_07880 PF05872 Bacterial protein of unknown function (DUF853) KYK33_07895 PF00753 Metallo-beta-lactamase superfamily KYK33_07895 PF03772 Competence protein KYK33_07900 PF00664 ABC transporter transmembrane region KYK33_07900 PF00005 ABC transporter KYK33_07905 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KYK33_07910 PF03966 Trm112p-like protein KYK33_07915 PF02348 Cytidylyltransferase KYK33_07920 PF00072 Response regulator receiver domain KYK33_07920 PF00196 Bacterial regulatory proteins, luxR family KYK33_07925 PF01541 GIY-YIG catalytic domain KYK33_07925 PF02151 UvrB/uvrC motif KYK33_07925 PF08459 UvrC Helix-hairpin-helix N-terminal KYK33_07930 PF01066 CDP-alcohol phosphatidyltransferase KYK33_07950 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system KYK33_07960 PF08240 Alcohol dehydrogenase GroES-like domain KYK33_07960 PF00107 Zinc-binding dehydrogenase KYK33_07965 PF16925 Tetracyclin repressor-like, C-terminal domain KYK33_07965 PF00440 Bacterial regulatory proteins, tetR family KYK33_07970 PF04226 Transglycosylase associated protein KYK33_07975 PF00149 Calcineurin-like phosphoesterase KYK33_07985 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KYK33_07990 PF01406 tRNA synthetases class I (C) catalytic domain KYK33_07990 PF09190 DALR domain KYK33_08000 PF00990 Diguanylate cyclase, GGDEF domain KYK33_08000 PF13185 GAF domain KYK33_08035 PF01169 Uncharacterized protein family UPF0016 KYK33_08040 PF01253 Translation initiation factor SUI1 KYK33_08050 PF02421 Ferrous iron transport protein B KYK33_08050 PF07670 Nucleoside recognition KYK33_08050 PF07664 Ferrous iron transport protein B C terminus KYK33_08060 PF00437 Type II/IV secretion system protein KYK33_08080 PF01032 FecCD transport family KYK33_08085 PF00005 ABC transporter KYK33_08095 PF00793 DAHP synthetase I family KYK33_08100 PF01219 Prokaryotic diacylglycerol kinase KYK33_08110 PF00497 Bacterial extracellular solute-binding proteins, family 3 KYK33_08110 PF01464 Transglycosylase SLT domain KYK33_08115 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KYK33_08115 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KYK33_08115 PF02769 AIR synthase related protein, C-terminal domain KYK33_08120 PF00361 Proton-conducting membrane transporter KYK33_08125 PF00361 Proton-conducting membrane transporter KYK33_08130 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KYK33_08130 PF00361 Proton-conducting membrane transporter KYK33_08135 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KYK33_08140 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KYK33_08145 PF12838 4Fe-4S dicluster domain KYK33_08150 PF00146 NADH dehydrogenase KYK33_08155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KYK33_08155 PF00384 Molybdopterin oxidoreductase KYK33_08155 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KYK33_08160 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KYK33_08160 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KYK33_08170 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KYK33_08170 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KYK33_08175 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KYK33_08180 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KYK33_08185 PF13677 Membrane MotB of proton-channel complex MotA/MotB KYK33_08185 PF00691 OmpA family KYK33_08190 PF01618 MotA/TolQ/ExbB proton channel family KYK33_08205 PF04536 TPM domain KYK33_08215 PF03411 Penicillin-insensitive murein endopeptidase KYK33_08225 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KYK33_08230 PF00248 Aldo/keto reductase family KYK33_08240 PF00106 short chain dehydrogenase KYK33_08245 PF01212 Beta-eliminating lyase KYK33_08250 PF13537 Glutamine amidotransferase domain KYK33_08250 PF00733 Asparagine synthase KYK33_08260 PF02254 TrkA-N domain KYK33_08260 PF00999 Sodium/hydrogen exchanger family KYK33_08265 PF13344 Haloacid dehalogenase-like hydrolase KYK33_08270 PF00962 Adenosine/AMP deaminase KYK33_08275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KYK33_08290 PF01565 FAD binding domain KYK33_08290 PF02913 FAD linked oxidases, C-terminal domain KYK33_08290 PF13183 4Fe-4S dicluster domain KYK33_08300 PF03061 Thioesterase superfamily KYK33_08305 PF00270 DEAD/DEAH box helicase KYK33_08305 PF03880 DbpA RNA binding domain KYK33_08305 PF00271 Helicase conserved C-terminal domain KYK33_08315 PF07690 Major Facilitator Superfamily KYK33_08320 PF07690 Major Facilitator Superfamily KYK33_08330 PF07992 Pyridine nucleotide-disulphide oxidoreductase KYK33_08330 PF13192 Thioredoxin domain KYK33_08335 PF00578 AhpC/TSA family KYK33_08335 PF10417 C-terminal domain of 1-Cys peroxiredoxin KYK33_08340 PF00571 CBS domain KYK33_08345 PF02547 Queuosine biosynthesis protein KYK33_08350 PF01702 Queuine tRNA-ribosyltransferase KYK33_08355 PF02699 Preprotein translocase subunit KYK33_08360 PF02355 Protein export membrane protein KYK33_08360 PF07549 SecD/SecF GG Motif KYK33_08360 PF13721 SecD export protein N-terminal TM region KYK33_08365 PF02355 Protein export membrane protein KYK33_08365 PF07549 SecD/SecF GG Motif KYK33_08375 PF13181 Tetratricopeptide repeat KYK33_08375 PF07719 Tetratricopeptide repeat KYK33_08380 PF01136 Peptidase family U32 KYK33_08385 PF01136 Peptidase family U32 KYK33_08390 PF02036 SCP-2 sterol transfer family KYK33_08400 PF00588 SpoU rRNA Methylase family KYK33_08405 PF02082 Transcriptional regulator KYK33_08410 PF00266 Aminotransferase class-V KYK33_08415 PF01592 NifU-like N terminal domain KYK33_08420 PF01521 Iron-sulphur cluster biosynthesis KYK33_08425 PF07743 HSCB C-terminal oligomerisation domain KYK33_08425 PF00226 DnaJ domain KYK33_08430 PF00012 Hsp70 protein KYK33_08435 PF00111 2Fe-2S iron-sulfur cluster binding domain KYK33_08440 PF12404 Peptidase KYK33_08440 PF00883 Cytosol aminopeptidase family, catalytic domain KYK33_08445 PF00883 Cytosol aminopeptidase family, catalytic domain KYK33_08445 PF12404 Peptidase KYK33_08450 PF00334 Nucleoside diphosphate kinase KYK33_08455 PF04055 Radical SAM superfamily KYK33_08465 PF13464 Domain of unknown function (DUF4115) KYK33_08470 PF04551 GcpE protein KYK33_08475 PF13393 Histidyl-tRNA synthetase KYK33_08475 PF03129 Anticodon binding domain KYK33_08480 PF09976 Tetratricopeptide repeat-like domain KYK33_08485 PF13360 PQQ-like domain KYK33_08490 PF01926 50S ribosome-binding GTPase KYK33_08490 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KYK33_08500 PF00324 Amino acid permease KYK33_08510 PF03618 Kinase/pyrophosphorylase KYK33_08515 PF00391 PEP-utilising enzyme, mobile domain KYK33_08515 PF02896 PEP-utilising enzyme, TIM barrel domain KYK33_08515 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KYK33_08520 PF17996 Carbohydrate esterase 2 N-terminal KYK33_08520 PF13472 GDSL-like Lipase/Acylhydrolase family KYK33_08540 PF03180 NLPA lipoprotein KYK33_08550 PF11890 Domain of unknown function (DUF3410) KYK33_08550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KYK33_08550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KYK33_08555 PF01118 Semialdehyde dehydrogenase, NAD binding domain KYK33_08555 PF02774 Semialdehyde dehydrogenase, dimerisation domain KYK33_08565 PF01416 tRNA pseudouridine synthase KYK33_08570 PF01039 Carboxyl transferase domain KYK33_08570 PF17848 Acetyl-coA carboxylase zinc finger domain KYK33_08575 PF02875 Mur ligase family, glutamate ligase domain KYK33_08575 PF08245 Mur ligase middle domain KYK33_08580 PF05036 Sporulation related domain KYK33_08585 PF04358 DsrC like protein KYK33_08590 PF12805 FUSC-like inner membrane protein yccS KYK33_08595 PF01027 Inhibitor of apoptosis-promoting Bax1 KYK33_08600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_08600 PF03466 LysR substrate binding domain KYK33_08615 PF00171 Aldehyde dehydrogenase family KYK33_08620 PF00990 Diguanylate cyclase, GGDEF domain KYK33_08620 PF08448 PAS fold KYK33_08625 PF00849 RNA pseudouridylate synthase KYK33_08635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KYK33_08640 PF04209 homogentisate 1,2-dioxygenase KYK33_08650 PF02798 Glutathione S-transferase, N-terminal domain KYK33_08650 PF14497 Glutathione S-transferase, C-terminal domain KYK33_08660 PF00486 Transcriptional regulatory protein, C terminal KYK33_08660 PF00072 Response regulator receiver domain KYK33_08665 PF03466 LysR substrate binding domain KYK33_08665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_08675 PF03707 Bacterial signalling protein N terminal repeat KYK33_08675 PF00990 Diguanylate cyclase, GGDEF domain KYK33_08675 PF00563 EAL domain KYK33_08675 PF13188 PAS domain KYK33_08680 PF00881 Nitroreductase family KYK33_08695 PF07690 Major Facilitator Superfamily KYK33_08700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_08700 PF03466 LysR substrate binding domain KYK33_08705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_08705 PF03466 LysR substrate binding domain KYK33_08710 PF00925 GTP cyclohydrolase II KYK33_08715 PF02224 Cytidylate kinase KYK33_08720 PF00575 S1 RNA binding domain KYK33_08725 PF00216 Bacterial DNA-binding protein KYK33_08735 PF18073 Rubredoxin metal binding domain KYK33_08740 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KYK33_08755 PF06508 Queuosine biosynthesis protein QueC KYK33_08760 PF04055 Radical SAM superfamily KYK33_08765 PF12843 Putative quorum-sensing-regulated virulence factor KYK33_08770 PF01923 Cobalamin adenosyltransferase KYK33_08775 PF00816 H-NS histone family KYK33_08780 PF03553 Na+/H+ antiporter family KYK33_08785 PF00265 Thymidine kinase KYK33_08795 PF10722 Putative bacterial sensory transduction regulator KYK33_08805 PF00313 'Cold-shock' DNA-binding domain KYK33_08810 PF02617 ATP-dependent Clp protease adaptor protein ClpS KYK33_08815 PF10431 C-terminal, D2-small domain, of ClpB protein KYK33_08815 PF00004 ATPase family associated with various cellular activities (AAA) KYK33_08815 PF07724 AAA domain (Cdc48 subfamily) KYK33_08815 PF17871 AAA lid domain KYK33_08815 PF02861 Clp amino terminal domain, pathogenicity island component KYK33_08820 PF01176 Translation initiation factor 1A / IF-1 KYK33_08825 PF04376 Arginine-tRNA-protein transferase, N terminus KYK33_08825 PF04377 Arginine-tRNA-protein transferase, C terminus KYK33_08830 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KYK33_08835 PF05433 Glycine zipper 2TM domain KYK33_08840 PF07992 Pyridine nucleotide-disulphide oxidoreductase KYK33_08845 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KYK33_08845 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KYK33_08850 PF01037 Lrp/AsnC ligand binding domain KYK33_08855 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KYK33_08855 PF17854 FtsK alpha domain KYK33_08855 PF09397 Ftsk gamma domain KYK33_08855 PF01580 FtsK/SpoIIIE family KYK33_08860 PF03548 Outer membrane lipoprotein carrier protein LolA KYK33_08865 PF00004 ATPase family associated with various cellular activities (AAA) KYK33_08865 PF16193 AAA C-terminal domain KYK33_08865 PF12002 MgsA AAA+ ATPase C terminal KYK33_08870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KYK33_08870 PF02403 Seryl-tRNA synthetase N-terminal domain KYK33_08875 PF03806 AbgT putative transporter family KYK33_08880 PF02674 Colicin V production protein KYK33_08885 PF00156 Phosphoribosyl transferase domain KYK33_08890 PF04893 Yip1 domain KYK33_08895 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KYK33_08900 PF00005 ABC transporter KYK33_08905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KYK33_08905 PF00005 ABC transporter KYK33_08910 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_08910 PF12911 N-terminal TM domain of oligopeptide transport permease C KYK33_08915 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_08920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KYK33_08925 PF02954 Bacterial regulatory protein, Fis family KYK33_08925 PF00158 Sigma-54 interaction domain KYK33_08930 PF04012 PspA/IM30 family KYK33_08935 PF06667 Phage shock protein B KYK33_08945 PF04317 YcjX-like family, DUF463 KYK33_08950 PF05128 Domain of unknown function (DUF697) KYK33_08955 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KYK33_08960 PF01329 Pterin 4 alpha carbinolamine dehydratase KYK33_08965 PF18024 Helix-turn-helix domain KYK33_08965 PF00158 Sigma-54 interaction domain KYK33_08975 PF03707 Bacterial signalling protein N terminal repeat KYK33_08975 PF00563 EAL domain KYK33_08975 PF00990 Diguanylate cyclase, GGDEF domain KYK33_08980 PF00691 OmpA family KYK33_08985 PF03741 Integral membrane protein TerC family KYK33_08995 PF08891 YfcL protein KYK33_09000 PF00501 AMP-binding enzyme KYK33_09005 PF00873 AcrB/AcrD/AcrF family KYK33_09010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KYK33_09010 PF00529 HlyD membrane-fusion protein of T1SS KYK33_09015 PF06826 Predicted Permease Membrane Region KYK33_09015 PF02080 TrkA-C domain KYK33_09025 PF00271 Helicase conserved C-terminal domain KYK33_09025 PF02151 UvrB/uvrC motif KYK33_09025 PF04851 Type III restriction enzyme, res subunit KYK33_09025 PF12344 Ultra-violet resistance protein B KYK33_09025 PF17757 UvrB interaction domain KYK33_09035 PF09335 SNARE associated Golgi protein KYK33_09040 PF18381 YcaO cyclodehydratase C-terminal domain KYK33_09040 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding KYK33_09050 PF00893 Small Multidrug Resistance protein KYK33_09055 PF01118 Semialdehyde dehydrogenase, NAD binding domain KYK33_09055 PF02774 Semialdehyde dehydrogenase, dimerisation domain KYK33_09060 PF01053 Cys/Met metabolism PLP-dependent enzyme KYK33_09070 PF00990 Diguanylate cyclase, GGDEF domain KYK33_09075 PF13460 NAD(P)H-binding KYK33_09080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_09080 PF03466 LysR substrate binding domain KYK33_09085 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KYK33_09085 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KYK33_09110 PF01197 Ribosomal protein L31 KYK33_09115 PF00444 Ribosomal protein L36 KYK33_09120 PF00497 Bacterial extracellular solute-binding proteins, family 3 KYK33_09125 PF00795 Carbon-nitrogen hydrolase KYK33_09130 PF00155 Aminotransferase class I and II KYK33_09135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_09135 PF03466 LysR substrate binding domain KYK33_09150 PF01863 Protein of unknown function DUF45 KYK33_09165 PF03606 C4-dicarboxylate anaerobic carrier KYK33_09175 PF01266 FAD dependent oxidoreductase KYK33_09175 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KYK33_09180 PF00109 Beta-ketoacyl synthase, N-terminal domain KYK33_09180 PF02801 Beta-ketoacyl synthase, C-terminal domain KYK33_09190 PF06865 Pyrimidine/purine nucleoside phosphorylase KYK33_09195 PF00375 Sodium:dicarboxylate symporter family KYK33_09200 PF13411 MerR HTH family regulatory protein KYK33_09205 PF02803 Thiolase, C-terminal domain KYK33_09205 PF00108 Thiolase, N-terminal domain KYK33_09210 PF00563 EAL domain KYK33_09210 PF08668 HDOD domain KYK33_09215 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KYK33_09220 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KYK33_09230 PF04542 Sigma-70 region 2 KYK33_09230 PF08281 Sigma-70, region 4 KYK33_09255 PF01882 Protein of unknown function DUF58 KYK33_09260 PF07726 ATPase family associated with various cellular activities (AAA) KYK33_09260 PF17863 AAA lid domain KYK33_09265 PF00108 Thiolase, N-terminal domain KYK33_09265 PF02803 Thiolase, C-terminal domain KYK33_09270 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KYK33_09270 PF00378 Enoyl-CoA hydratase/isomerase KYK33_09270 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KYK33_09280 PF07152 YaeQ protein KYK33_09285 PF03776 Septum formation topological specificity factor MinE KYK33_09290 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KYK33_09295 PF03775 Septum formation inhibitor MinC, C-terminal domain KYK33_09295 PF05209 Septum formation inhibitor MinC, N-terminal domain KYK33_09300 PF05166 YcgL domain KYK33_09305 PF03313 Serine dehydratase alpha chain KYK33_09305 PF03315 Serine dehydratase beta chain KYK33_09310 PF03315 Serine dehydratase beta chain KYK33_09310 PF03313 Serine dehydratase alpha chain KYK33_09315 PF03222 Tryptophan/tyrosine permease family KYK33_09320 PF00293 NUDIX domain KYK33_09325 PF04715 Anthranilate synthase component I, N terminal region KYK33_09325 PF00425 chorismate binding enzyme KYK33_09345 PF00343 Carbohydrate phosphorylase KYK33_09355 PF00939 Sodium:sulfate symporter transmembrane region KYK33_09360 PF00085 Thioredoxin KYK33_09365 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KYK33_09365 PF00512 His Kinase A (phospho-acceptor) domain KYK33_09365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_09365 PF00672 HAMP domain KYK33_09365 PF00072 Response regulator receiver domain KYK33_09365 PF01627 Hpt domain KYK33_09370 PF00664 ABC transporter transmembrane region KYK33_09370 PF00005 ABC transporter KYK33_09375 PF00664 ABC transporter transmembrane region KYK33_09375 PF00005 ABC transporter KYK33_09415 PF00005 ABC transporter KYK33_09415 PF08402 TOBE domain KYK33_09425 PF00266 Aminotransferase class-V KYK33_09435 PF01266 FAD dependent oxidoreductase KYK33_09440 PF00392 Bacterial regulatory proteins, gntR family KYK33_09440 PF07702 UTRA domain KYK33_09470 PF01554 MatE KYK33_09475 PF06786 Uncharacterised protein family (UPF0253) KYK33_09480 PF00677 Lumazine binding domain KYK33_09490 PF13419 Haloacid dehalogenase-like hydrolase KYK33_09495 PF02222 ATP-grasp domain KYK33_09500 PF00892 EamA-like transporter family KYK33_09505 PF02525 Flavodoxin-like fold KYK33_09530 PF17783 CvfB-like winged helix domain KYK33_09530 PF13509 S1 domain KYK33_09540 PF04269 Protein of unknown function, DUF440 KYK33_09545 PF00912 Transglycosylase KYK33_09550 PF04269 Protein of unknown function, DUF440 KYK33_09555 PF08543 Phosphomethylpyrimidine kinase KYK33_09560 PF03992 Antibiotic biosynthesis monooxygenase KYK33_09565 PF13673 Acetyltransferase (GNAT) domain KYK33_09580 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KYK33_09590 PF13673 Acetyltransferase (GNAT) domain KYK33_09600 PF00271 Helicase conserved C-terminal domain KYK33_09600 PF00270 DEAD/DEAH box helicase KYK33_09605 PF00255 Glutathione peroxidase KYK33_09615 PF07478 D-ala D-ala ligase C-terminus KYK33_09615 PF01820 D-ala D-ala ligase N-terminus KYK33_09620 PF18029 Glyoxalase-like domain KYK33_09620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KYK33_09625 PF03942 DTW domain KYK33_09630 PF01925 Sulfite exporter TauE/SafE KYK33_09635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_09635 PF03466 LysR substrate binding domain KYK33_09640 PF00892 EamA-like transporter family KYK33_09645 PF02311 AraC-like ligand binding domain KYK33_09645 PF12833 Helix-turn-helix domain KYK33_09650 PF11398 Protein of unknown function (DUF2813) KYK33_09700 PF00883 Cytosol aminopeptidase family, catalytic domain KYK33_09700 PF02789 Cytosol aminopeptidase family, N-terminal domain KYK33_09705 PF13419 Haloacid dehalogenase-like hydrolase KYK33_09710 PF07687 Peptidase dimerisation domain KYK33_09710 PF01546 Peptidase family M20/M25/M40 KYK33_09715 PF00196 Bacterial regulatory proteins, luxR family KYK33_09715 PF00072 Response regulator receiver domain KYK33_09720 PF01743 Poly A polymerase head domain KYK33_09720 PF00571 CBS domain KYK33_09720 PF12627 Probable RNA and SrmB- binding site of polymerase A KYK33_09720 PF02272 DHHA1 domain KYK33_09720 PF01368 DHH family KYK33_09725 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KYK33_09725 PF00271 Helicase conserved C-terminal domain KYK33_09725 PF04408 Helicase associated domain (HA2) KYK33_09725 PF11898 Domain of unknown function (DUF3418) KYK33_09725 PF00270 DEAD/DEAH box helicase KYK33_09735 PF01386 Ribosomal L25p family KYK33_09740 PF00753 Metallo-beta-lactamase superfamily KYK33_09750 PF00586 AIR synthase related protein, N-terminal domain KYK33_09750 PF02769 AIR synthase related protein, C-terminal domain KYK33_09760 PF10672 S-adenosylmethionine-dependent methyltransferase KYK33_09760 PF17785 PUA-like domain KYK33_09765 PF12729 Four helix bundle sensory module for signal transduction KYK33_09765 PF00672 HAMP domain KYK33_09765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_09770 PF00708 Acylphosphatase KYK33_09780 PF01588 Putative tRNA binding domain KYK33_09780 PF09334 tRNA synthetases class I (M) KYK33_09780 PF08264 Anticodon-binding domain of tRNA KYK33_09785 PF10609 NUBPL iron-transfer P-loop NTPase KYK33_09790 PF00485 Phosphoribulokinase / Uridine kinase family KYK33_09795 PF00692 dUTPase KYK33_09800 PF01384 Phosphate transporter family KYK33_09805 PF02600 Disulfide bond formation protein DsbB KYK33_09810 PF06450 Bacterial Na+/H+ antiporter B (NhaB) KYK33_09815 PF07840 FadR C-terminal domain KYK33_09815 PF00392 Bacterial regulatory proteins, gntR family KYK33_09820 PF04293 SpoVR like protein KYK33_09825 PF04285 Protein of unknown function (DUF444) KYK33_09830 PF08298 PrkA AAA domain KYK33_09830 PF06798 PrkA serine protein kinase C-terminal domain KYK33_09835 PF09382 RQC domain KYK33_09835 PF16124 RecQ zinc-binding KYK33_09835 PF00271 Helicase conserved C-terminal domain KYK33_09835 PF00270 DEAD/DEAH box helicase KYK33_09835 PF00570 HRDC domain KYK33_09840 PF00375 Sodium:dicarboxylate symporter family KYK33_09845 PF00111 2Fe-2S iron-sulfur cluster binding domain KYK33_09850 PF00268 Ribonucleotide reductase, small chain KYK33_09855 PF00317 Ribonucleotide reductase, all-alpha domain KYK33_09855 PF03477 ATP cone domain KYK33_09855 PF02867 Ribonucleotide reductase, barrel domain KYK33_09860 PF13419 Haloacid dehalogenase-like hydrolase KYK33_09870 PF03989 DNA gyrase C-terminal domain, beta-propeller KYK33_09870 PF00521 DNA gyrase/topoisomerase IV, subunit A KYK33_09875 PF04055 Radical SAM superfamily KYK33_09885 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KYK33_09885 PF02824 TGS domain KYK33_09885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KYK33_09885 PF03129 Anticodon binding domain KYK33_09890 PF00707 Translation initiation factor IF-3, C-terminal domain KYK33_09890 PF05198 Translation initiation factor IF-3, N-terminal domain KYK33_09895 PF01632 Ribosomal protein L35 KYK33_09900 PF00453 Ribosomal protein L20 KYK33_09905 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KYK33_09905 PF01409 tRNA synthetases class II core domain (F) KYK33_09910 PF03484 tRNA synthetase B5 domain KYK33_09910 PF03483 B3/4 domain KYK33_09910 PF03147 Ferredoxin-fold anticodon binding domain KYK33_09910 PF01588 Putative tRNA binding domain KYK33_09910 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KYK33_09915 PF00216 Bacterial DNA-binding protein KYK33_09920 PF00072 Response regulator receiver domain KYK33_09920 PF09456 RcsC Alpha-Beta-Loop (ABL) KYK33_09920 PF00512 His Kinase A (phospho-acceptor) domain KYK33_09920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_09935 PF02146 Sir2 family KYK33_09945 PF08447 PAS fold KYK33_09945 PF00563 EAL domain KYK33_09945 PF08448 PAS fold KYK33_09945 PF00990 Diguanylate cyclase, GGDEF domain KYK33_09950 PF00356 Bacterial regulatory proteins, lacI family KYK33_09955 PF00294 pfkB family carbohydrate kinase KYK33_09960 PF13407 Periplasmic binding protein domain KYK33_09965 PF02653 Branched-chain amino acid transport system / permease component KYK33_09970 PF00005 ABC transporter KYK33_09975 PF05025 RbsD / FucU transport protein family KYK33_09980 PF02798 Glutathione S-transferase, N-terminal domain KYK33_09980 PF14497 Glutathione S-transferase, C-terminal domain KYK33_09995 PF01171 PP-loop family KYK33_10000 PF00582 Universal stress protein family KYK33_10005 PF00027 Cyclic nucleotide-binding domain KYK33_10005 PF13545 Crp-like helix-turn-helix domain KYK33_10020 PF00403 Heavy-metal-associated domain KYK33_10030 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KYK33_10030 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP KYK33_10045 PF00115 Cytochrome C and Quinol oxidase polypeptide I KYK33_10055 PF13185 GAF domain KYK33_10060 PF17516 ProQ C-terminal domain KYK33_10060 PF04352 ProQ/FINO family KYK33_10065 PF00595 PDZ domain KYK33_10065 PF03572 Peptidase family S41 KYK33_10065 PF17804 Tail specific protease N-terminal domain KYK33_10065 PF11818 C-terminal domain of tail specific protease (DUF3340) KYK33_10070 PF11940 Domain of unknown function (DUF3458) Ig-like fold KYK33_10070 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KYK33_10070 PF01433 Peptidase family M1 domain KYK33_10080 PF05088 Bacterial NAD-glutamate dehydrogenase KYK33_10085 PF01180 Dihydroorotate dehydrogenase KYK33_10090 PF07126 Cell-division protein ZapC KYK33_10095 PF01170 Putative RNA methylase family UPF0020 KYK33_10095 PF02926 THUMP domain KYK33_10095 PF10672 S-adenosylmethionine-dependent methyltransferase KYK33_10105 PF12848 ABC transporter KYK33_10105 PF00005 ABC transporter KYK33_10105 PF16326 ABC transporter C-terminal domain KYK33_10115 PF04957 Ribosome modulation factor KYK33_10120 PF07977 FabA-like domain KYK33_10125 PF13654 AAA domain KYK33_10125 PF05362 Lon protease (S16) C-terminal proteolytic domain KYK33_10140 PF05707 Zonular occludens toxin (Zot) KYK33_10190 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KYK33_10250 PF07130 YebG protein KYK33_10260 PF04403 Paraquat-inducible protein A KYK33_10265 PF02470 MlaD protein KYK33_10270 PF01189 16S rRNA methyltransferase RsmB/F KYK33_10270 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF KYK33_10270 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF KYK33_10280 PF00589 Phage integrase family KYK33_10285 PF01026 TatD related DNase KYK33_10290 PF09115 DNA polymerase III, delta subunit, C terminal KYK33_10295 PF02223 Thymidylate kinase KYK33_10300 PF02618 YceG-like family KYK33_10305 PF01063 Amino-transferase class IV KYK33_10310 PF02801 Beta-ketoacyl synthase, C-terminal domain KYK33_10310 PF00109 Beta-ketoacyl synthase, N-terminal domain KYK33_10315 PF00550 Phosphopantetheine attachment site KYK33_10325 PF00698 Acyl transferase domain KYK33_10330 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KYK33_10330 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KYK33_10335 PF02504 Fatty acid synthesis protein KYK33_10340 PF01783 Ribosomal L32p protein family KYK33_10345 PF02620 Large ribosomal RNA subunit accumulation protein YceD KYK33_10350 PF02545 Maf-like protein KYK33_10355 PF13419 Haloacid dehalogenase-like hydrolase KYK33_10360 PF01479 S4 domain KYK33_10360 PF00849 RNA pseudouridylate synthase KYK33_10365 PF12111 Polyribonucleotide phosphorylase C terminal KYK33_10365 PF10150 Ribonuclease E/G family KYK33_10365 PF00575 S1 RNA binding domain KYK33_10370 PF03692 Putative zinc- or iron-chelating domain KYK33_10375 PF02629 CoA binding domain KYK33_10375 PF00549 CoA-ligase KYK33_10380 PF08442 ATP-grasp domain KYK33_10380 PF00549 CoA-ligase KYK33_10385 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KYK33_10385 PF00364 Biotin-requiring enzyme KYK33_10385 PF02817 e3 binding domain KYK33_10390 PF02779 Transketolase, pyrimidine binding domain KYK33_10390 PF16078 2-oxoglutarate dehydrogenase N-terminus KYK33_10390 PF00676 Dehydrogenase E1 component KYK33_10390 PF16870 2-oxoglutarate dehydrogenase C-terminal KYK33_10395 PF13085 2Fe-2S iron-sulfur cluster binding domain KYK33_10400 PF02910 Fumarate reductase flavoprotein C-term KYK33_10400 PF00890 FAD binding domain KYK33_10405 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KYK33_10410 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KYK33_10415 PF00285 Citrate synthase, C-terminal domain KYK33_10425 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KYK33_10430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KYK33_10435 PF00892 EamA-like transporter family KYK33_10445 PF00300 Histidine phosphatase superfamily (branch 1) KYK33_10450 PF00675 Insulinase (Peptidase family M16) KYK33_10450 PF05193 Peptidase M16 inactive domain KYK33_10450 PF16187 Middle or third domain of peptidase_M16 KYK33_10455 PF05724 Thiopurine S-methyltransferase (TPMT) KYK33_10500 PF13495 Phage integrase, N-terminal SAM-like domain KYK33_10500 PF00589 Phage integrase family KYK33_10505 PF00117 Glutamine amidotransferase class-I KYK33_10505 PF00958 GMP synthase C terminal domain KYK33_10505 PF02540 NAD synthase KYK33_10510 PF00571 CBS domain KYK33_10510 PF00478 IMP dehydrogenase / GMP reductase domain KYK33_10525 PF13742 OB-fold nucleic acid binding domain KYK33_10525 PF02601 Exonuclease VII, large subunit KYK33_10530 PF04055 Radical SAM superfamily KYK33_10535 PF00672 HAMP domain KYK33_10535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_10540 PF00793 DAHP synthetase I family KYK33_10545 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KYK33_10550 PF00266 Aminotransferase class-V KYK33_10555 PF00766 Electron transfer flavoprotein FAD-binding domain KYK33_10555 PF01012 Electron transfer flavoprotein domain KYK33_10560 PF01012 Electron transfer flavoprotein domain KYK33_10570 PF01544 CorA-like Mg2+ transporter protein KYK33_10575 PF11143 Protein of unknown function (DUF2919) KYK33_10585 PF03562 MltA specific insert domain KYK33_10585 PF06725 3D domain KYK33_10590 PF06945 Protein of unknown function (DUF1289) KYK33_10595 PF02378 Phosphotransferase system, EIIC KYK33_10595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KYK33_10600 PF00294 pfkB family carbohydrate kinase KYK33_10605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KYK33_10605 PF00381 PTS HPr component phosphorylation site KYK33_10610 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KYK33_10610 PF00356 Bacterial regulatory proteins, lacI family KYK33_10615 PF03222 Tryptophan/tyrosine permease family KYK33_10630 PF00271 Helicase conserved C-terminal domain KYK33_10630 PF00270 DEAD/DEAH box helicase KYK33_10635 PF01264 Chorismate synthase KYK33_10640 PF05175 Methyltransferase small domain KYK33_10645 PF01713 Smr domain KYK33_10665 PF08329 Chitinase A, N-terminal domain KYK33_10665 PF00704 Glycosyl hydrolases family 18 KYK33_10675 PF02575 YbaB/EbfC DNA-binding family KYK33_10680 PF12169 DNA polymerase III subunits gamma and tau domain III KYK33_10680 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KYK33_10680 PF12170 DNA polymerase III tau subunit V interacting with alpha KYK33_10685 PF00156 Phosphoribosyl transferase domain KYK33_10690 PF04304 Protein of unknown function (DUF454) KYK33_10695 PF01207 Dihydrouridine synthase (Dus) KYK33_10705 PF01612 3'-5' exonuclease KYK33_10705 PF00570 HRDC domain KYK33_10710 PF13193 AMP-binding enzyme C-terminal domain KYK33_10710 PF00501 AMP-binding enzyme KYK33_10715 PF12697 Alpha/beta hydrolase family KYK33_10725 PF00814 Glycoprotease family KYK33_10730 PF13307 Helicase C-terminal domain KYK33_10730 PF04851 Type III restriction enzyme, res subunit KYK33_10740 PF01634 ATP phosphoribosyltransferase KYK33_10740 PF08029 HisG, C-terminal domain KYK33_10745 PF00815 Histidinol dehydrogenase KYK33_10750 PF00155 Aminotransferase class I and II KYK33_10755 PF00475 Imidazoleglycerol-phosphate dehydratase KYK33_10755 PF08645 Polynucleotide kinase 3 phosphatase KYK33_10760 PF00117 Glutamine amidotransferase class-I KYK33_10765 PF00977 Histidine biosynthesis protein KYK33_10770 PF00977 Histidine biosynthesis protein KYK33_10775 PF01502 Phosphoribosyl-AMP cyclohydrolase KYK33_10775 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KYK33_10790 PF05433 Glycine zipper 2TM domain KYK33_10805 PF13953 PapC C-terminal domain KYK33_10805 PF13954 PapC N-terminal domain KYK33_10805 PF00577 Outer membrane usher protein KYK33_10810 PF02753 Pili assembly chaperone PapD, C-terminal domain KYK33_10810 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KYK33_10820 PF12833 Helix-turn-helix domain KYK33_10840 PF03831 PhnA domain KYK33_10840 PF08274 PhnA Zinc-Ribbon KYK33_10855 PF01810 LysE type translocator KYK33_10865 PF02567 Phenazine biosynthesis-like protein KYK33_10880 PF00300 Histidine phosphatase superfamily (branch 1) KYK33_10895 PF03330 Lytic transglycolase KYK33_10895 PF05036 Sporulation related domain KYK33_10900 PF16330 MukB hinge domain KYK33_10900 PF04310 MukB N-terminal KYK33_10905 PF04288 MukE-like family KYK33_10910 PF17193 MukF C-terminal domain KYK33_10910 PF03882 MukF winged-helix domain KYK33_10910 PF17192 MukF middle domain KYK33_10915 PF13847 Methyltransferase domain KYK33_10920 PF00857 Isochorismatase family KYK33_10925 PF00857 Isochorismatase family KYK33_10930 PF05726 Pirin C-terminal cupin domain KYK33_10930 PF02678 Pirin KYK33_10935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_10935 PF03466 LysR substrate binding domain KYK33_10940 PF02698 DUF218 domain KYK33_10945 PF00121 Triosephosphate isomerase KYK33_10950 PF00365 Phosphofructokinase KYK33_10955 PF13532 2OG-Fe(II) oxygenase superfamily KYK33_10965 PF00136 DNA polymerase family B KYK33_10965 PF03104 DNA polymerase family B, exonuclease domain KYK33_10975 PF02678 Pirin KYK33_10975 PF05726 Pirin C-terminal cupin domain KYK33_10990 PF03279 Bacterial lipid A biosynthesis acyltransferase KYK33_10995 PF03279 Bacterial lipid A biosynthesis acyltransferase KYK33_11000 PF07273 Protein of unknown function (DUF1439) KYK33_11010 PF00483 Nucleotidyl transferase KYK33_11030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_11030 PF17200 Single Cache domain 2 KYK33_11030 PF00672 HAMP domain KYK33_11035 PF00294 pfkB family carbohydrate kinase KYK33_11045 PF00762 Ferrochelatase KYK33_11050 PF05191 Adenylate kinase, active site lid KYK33_11055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_11055 PF00183 Hsp90 protein KYK33_11060 PF13662 Toprim domain KYK33_11060 PF02132 RecR protein KYK33_11065 PF00563 EAL domain KYK33_11065 PF00990 Diguanylate cyclase, GGDEF domain KYK33_11065 PF03707 Bacterial signalling protein N terminal repeat KYK33_11065 PF13188 PAS domain KYK33_11070 PF08411 Exonuclease C-terminal KYK33_11070 PF00929 Exonuclease KYK33_11085 PF03788 LrgA family KYK33_11090 PF04172 LrgB-like family KYK33_11095 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region KYK33_11095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KYK33_11100 PF13145 PPIC-type PPIASE domain KYK33_11105 PF00216 Bacterial DNA-binding protein KYK33_11110 PF05362 Lon protease (S16) C-terminal proteolytic domain KYK33_11110 PF00004 ATPase family associated with various cellular activities (AAA) KYK33_11110 PF02190 ATP-dependent protease La (LON) substrate-binding domain KYK33_11115 PF06689 ClpX C4-type zinc finger KYK33_11115 PF07724 AAA domain (Cdc48 subfamily) KYK33_11115 PF10431 C-terminal, D2-small domain, of ClpB protein KYK33_11120 PF00574 Clp protease KYK33_11125 PF05697 Bacterial trigger factor protein (TF) KYK33_11125 PF05698 Bacterial trigger factor protein (TF) C-terminus KYK33_11125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KYK33_11140 PF12704 MacB-like periplasmic core domain KYK33_11140 PF02687 FtsX-like permease family KYK33_11145 PF00005 ABC transporter KYK33_11150 PF12704 MacB-like periplasmic core domain KYK33_11150 PF02687 FtsX-like permease family KYK33_11160 PF03461 TRCF domain KYK33_11160 PF17757 UvrB interaction domain KYK33_11160 PF02559 CarD-like/TRCF domain KYK33_11160 PF00271 Helicase conserved C-terminal domain KYK33_11160 PF00270 DEAD/DEAH box helicase KYK33_11165 PF01261 Xylose isomerase-like TIM barrel KYK33_11170 PF00933 Glycosyl hydrolase family 3 N terminal domain KYK33_11180 PF00990 Diguanylate cyclase, GGDEF domain KYK33_11185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_11185 PF03466 LysR substrate binding domain KYK33_11195 PF00497 Bacterial extracellular solute-binding proteins, family 3 KYK33_11195 PF01464 Transglycosylase SLT domain KYK33_11245 PF13503 Domain of unknown function (DUF4123) KYK33_11250 PF04717 Type VI secretion system, phage-baseplate injector KYK33_11265 PF06761 Intracellular multiplication and human macrophage-killing KYK33_11265 PF14331 ImcF-related N-terminal domain KYK33_11265 PF06744 Type VI secretion protein IcmF C-terminal KYK33_11280 PF00158 Sigma-54 interaction domain KYK33_11280 PF02954 Bacterial regulatory protein, Fis family KYK33_11285 PF10431 C-terminal, D2-small domain, of ClpB protein KYK33_11285 PF00004 ATPase family associated with various cellular activities (AAA) KYK33_11285 PF07724 AAA domain (Cdc48 subfamily) KYK33_11285 PF17871 AAA lid domain KYK33_11295 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE KYK33_11315 PF05947 Type VI secretion system, TssF KYK33_11325 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KYK33_11345 PF00248 Aldo/keto reductase family KYK33_11360 PF12706 Beta-lactamase superfamily domain KYK33_11365 PF00248 Aldo/keto reductase family KYK33_11370 PF00465 Iron-containing alcohol dehydrogenase KYK33_11375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_11375 PF03466 LysR substrate binding domain KYK33_11385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_11385 PF03466 LysR substrate binding domain KYK33_11395 PF01925 Sulfite exporter TauE/SafE KYK33_11400 PF13520 Amino acid permease KYK33_11410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KYK33_11410 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KYK33_11415 PF00378 Enoyl-CoA hydratase/isomerase KYK33_11420 PF00378 Enoyl-CoA hydratase/isomerase KYK33_11425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KYK33_11425 PF02770 Acyl-CoA dehydrogenase, middle domain KYK33_11425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KYK33_11430 PF00171 Aldehyde dehydrogenase family KYK33_11435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KYK33_11435 PF02770 Acyl-CoA dehydrogenase, middle domain KYK33_11435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KYK33_11440 PF01039 Carboxyl transferase domain KYK33_11445 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KYK33_11445 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KYK33_11445 PF00378 Enoyl-CoA hydratase/isomerase KYK33_11450 PF00364 Biotin-requiring enzyme KYK33_11450 PF02785 Biotin carboxylase C-terminal domain KYK33_11450 PF00289 Biotin carboxylase, N-terminal domain KYK33_11450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KYK33_11455 PF00682 HMGL-like KYK33_11460 PF09278 MerR, DNA binding KYK33_11460 PF00376 MerR family regulatory protein KYK33_11470 PF01184 GPR1/FUN34/yaaH family KYK33_11475 PF06167 Glucose-regulated metallo-peptidase M90 KYK33_11485 PF01235 Sodium:alanine symporter family KYK33_11490 PF00378 Enoyl-CoA hydratase/isomerase KYK33_11505 PF04341 Protein of unknown function, DUF485 KYK33_11510 PF00474 Sodium:solute symporter family KYK33_11515 PF12848 ABC transporter KYK33_11515 PF00005 ABC transporter KYK33_11520 PF01226 Formate/nitrite transporter KYK33_11525 PF01228 Glycine radical KYK33_11525 PF02901 Pyruvate formate lyase-like KYK33_11530 PF03401 Tripartite tricarboxylate transporter family receptor KYK33_11540 PF01970 Tripartite tricarboxylate transporter TctA family KYK33_11545 PF00072 Response regulator receiver domain KYK33_11550 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KYK33_11550 PF17203 Single cache domain 3 KYK33_11550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_11550 PF00989 PAS fold KYK33_11555 PF00480 ROK family KYK33_11555 PF01047 MarR family KYK33_11560 PF02810 SEC-C motif KYK33_11570 PF01266 FAD dependent oxidoreductase KYK33_11570 PF04324 BFD-like [2Fe-2S] binding domain KYK33_11575 PF00890 FAD binding domain KYK33_11580 PF13183 4Fe-4S dicluster domain KYK33_11580 PF02754 Cysteine-rich domain KYK33_11585 PF00768 D-alanyl-D-alanine carboxypeptidase KYK33_11590 PF01266 FAD dependent oxidoreductase KYK33_11600 PF07969 Amidohydrolase family KYK33_11605 PF10011 Predicted membrane protein (DUF2254) KYK33_11610 PF01743 Poly A polymerase head domain KYK33_11610 PF00571 CBS domain KYK33_11615 PF01717 Cobalamin-independent synthase, Catalytic domain KYK33_11615 PF08267 Cobalamin-independent synthase, N-terminal domain KYK33_11620 PF03466 LysR substrate binding domain KYK33_11620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_11630 PF00593 TonB dependent receptor KYK33_11630 PF07715 TonB-dependent Receptor Plug Domain KYK33_11635 PF06445 GyrI-like small molecule binding domain KYK33_11635 PF12833 Helix-turn-helix domain KYK33_11650 PF00916 Sulfate permease family KYK33_11650 PF01740 STAS domain KYK33_11655 PF03553 Na+/H+ antiporter family KYK33_11685 PF03239 Iron permease FTR1 family KYK33_11690 PF01593 Flavin containing amine oxidoreductase KYK33_11710 PF07690 Major Facilitator Superfamily KYK33_11720 PF03600 Citrate transporter KYK33_11730 PF00005 ABC transporter KYK33_11735 PF02687 FtsX-like permease family KYK33_11735 PF12704 MacB-like periplasmic core domain KYK33_11755 PF04237 YjbR KYK33_11760 PF00583 Acetyltransferase (GNAT) family KYK33_11770 PF01625 Peptide methionine sulfoxide reductase KYK33_11775 PF00583 Acetyltransferase (GNAT) family KYK33_11775 PF00696 Amino acid kinase family KYK33_11780 PF00696 Amino acid kinase family KYK33_11780 PF01842 ACT domain KYK33_11790 PF00884 Sulfatase KYK33_11795 PF17676 LD-carboxypeptidase C-terminal domain KYK33_11795 PF02016 LD-carboxypeptidase N-terminal domain KYK33_11800 PF01906 Putative heavy-metal-binding KYK33_11805 PF07992 Pyridine nucleotide-disulphide oxidoreductase KYK33_11810 PF05728 Uncharacterised protein family (UPF0227) KYK33_11815 PF00990 Diguanylate cyclase, GGDEF domain KYK33_11820 PF01432 Peptidase family M3 KYK33_11820 PF08439 Oligopeptidase F KYK33_11825 PF01432 Peptidase family M3 KYK33_11825 PF08439 Oligopeptidase F KYK33_11830 PF05661 Protein of unknown function (DUF808) KYK33_11840 PF07549 SecD/SecF GG Motif KYK33_11840 PF02355 Protein export membrane protein KYK33_11845 PF13721 SecD export protein N-terminal TM region KYK33_11845 PF02355 Protein export membrane protein KYK33_11845 PF07549 SecD/SecF GG Motif KYK33_11880 PF01230 HIT domain KYK33_11885 PF00672 HAMP domain KYK33_11885 PF12729 Four helix bundle sensory module for signal transduction KYK33_11885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_11895 PF01979 Amidohydrolase family KYK33_11910 PF00375 Sodium:dicarboxylate symporter family KYK33_11915 PF00842 Alanine racemase, C-terminal domain KYK33_11915 PF01168 Alanine racemase, N-terminal domain KYK33_11920 PF03741 Integral membrane protein TerC family KYK33_11925 PF00005 ABC transporter KYK33_11925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KYK33_11930 PF00005 ABC transporter KYK33_11930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KYK33_11935 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_11935 PF12911 N-terminal TM domain of oligopeptide transport permease C KYK33_11940 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_11945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KYK33_11950 PF01914 MarC family integral membrane protein KYK33_11960 PF00465 Iron-containing alcohol dehydrogenase KYK33_11960 PF00171 Aldehyde dehydrogenase family KYK33_11965 PF01966 HD domain KYK33_11970 PF07694 5TMR of 5TMR-LYT KYK33_11970 PF06580 Histidine kinase KYK33_11975 PF04397 LytTr DNA-binding domain KYK33_11975 PF00072 Response regulator receiver domain KYK33_11980 PF02554 Carbon starvation protein CstA KYK33_11985 PF00924 Mechanosensitive ion channel KYK33_11985 PF12795 Mechanosensitive ion channel porin domain KYK33_11985 PF12794 Mechanosensitive ion channel inner membrane domain 1 KYK33_11990 PF11742 Protein of unknown function (DUF3302) KYK33_11995 PF00529 HlyD membrane-fusion protein of T1SS KYK33_11995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KYK33_12000 PF00271 Helicase conserved C-terminal domain KYK33_12000 PF04851 Type III restriction enzyme, res subunit KYK33_12005 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family KYK33_12010 PF00462 Glutaredoxin KYK33_12020 PF00155 Aminotransferase class I and II KYK33_12025 PF12241 Trans-2-enoyl-CoA reductase catalytic region KYK33_12025 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KYK33_12025 PF07055 Enoyl reductase FAD binding domain KYK33_12050 PF14310 Fibronectin type III-like domain KYK33_12050 PF00933 Glycosyl hydrolase family 3 N terminal domain KYK33_12050 PF01915 Glycosyl hydrolase family 3 C-terminal domain KYK33_12055 PF17853 GGDEF-like domain KYK33_12055 PF12833 Helix-turn-helix domain KYK33_12060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_12060 PF08447 PAS fold KYK33_12060 PF13426 PAS domain KYK33_12065 PF02508 Rnf-Nqr subunit, membrane protein KYK33_12070 PF04060 Putative Fe-S cluster KYK33_12075 PF13375 RnfC Barrel sandwich hybrid domain KYK33_12075 PF10531 SLBB domain KYK33_12075 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KYK33_12075 PF12838 4Fe-4S dicluster domain KYK33_12080 PF03116 NQR2, RnfD, RnfE family KYK33_12085 PF04205 FMN-binding domain KYK33_12090 PF02508 Rnf-Nqr subunit, membrane protein KYK33_12095 PF00730 HhH-GPD superfamily base excision DNA repair protein KYK33_12095 PF10576 Iron-sulfur binding domain of endonuclease III KYK33_12095 PF00633 Helix-hairpin-helix motif KYK33_12100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KYK33_12110 PF00691 OmpA family KYK33_12110 PF18393 MotY N-terminal domain KYK33_12115 PF00929 Exonuclease KYK33_12120 PF13726 Na+-H+ antiporter family KYK33_12120 PF03553 Na+/H+ antiporter family KYK33_12130 PF08241 Methyltransferase domain KYK33_12140 PF02347 Glycine cleavage system P-protein KYK33_12145 PF01597 Glycine cleavage H-protein KYK33_12150 PF01571 Aminomethyltransferase folate-binding domain KYK33_12150 PF08669 Glycine cleavage T-protein C-terminal barrel domain KYK33_12155 PF01494 FAD binding domain KYK33_12160 PF01494 FAD binding domain KYK33_12165 PF03695 Uncharacterised protein family (UPF0149) KYK33_12170 PF05164 Cell division protein ZapA KYK33_12180 PF00384 Molybdopterin oxidoreductase KYK33_12185 PF02634 FdhD/NarQ family KYK33_12190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_12190 PF03466 LysR substrate binding domain KYK33_12195 PF07690 Major Facilitator Superfamily KYK33_12200 PF00005 ABC transporter KYK33_12200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KYK33_12205 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_12205 PF12911 N-terminal TM domain of oligopeptide transport permease C KYK33_12210 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_12215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KYK33_12220 PF00043 Glutathione S-transferase, C-terminal domain KYK33_12220 PF02798 Glutathione S-transferase, N-terminal domain KYK33_12225 PF00043 Glutathione S-transferase, C-terminal domain KYK33_12225 PF02798 Glutathione S-transferase, N-terminal domain KYK33_12230 PF00440 Bacterial regulatory proteins, tetR family KYK33_12240 PF00459 Inositol monophosphatase family KYK33_12245 PF00672 HAMP domain KYK33_12245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_12250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KYK33_12270 PF00376 MerR family regulatory protein KYK33_12270 PF09278 MerR, DNA binding KYK33_12290 PF14521 Lysine-specific metallo-endopeptidase KYK33_12300 PF00270 DEAD/DEAH box helicase KYK33_12300 PF00271 Helicase conserved C-terminal domain KYK33_12315 PF08378 Nuclease-related domain KYK33_12320 PF07759 Protein of unknown function (DUF1615) KYK33_12325 PF08502 LeuA allosteric (dimerisation) domain KYK33_12325 PF00682 HMGL-like KYK33_12330 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KYK33_12330 PF02142 MGS-like domain KYK33_12330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KYK33_12335 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KYK33_12335 PF00117 Glutamine amidotransferase class-I KYK33_12340 PF05173 Dihydrodipicolinate reductase, C-terminus KYK33_12340 PF01113 Dihydrodipicolinate reductase, N-terminus KYK33_12350 PF01812 5-formyltetrahydrofolate cyclo-ligase family KYK33_12355 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KYK33_12360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KYK33_12360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KYK33_12360 PF01842 ACT domain KYK33_12430 PF00664 ABC transporter transmembrane region KYK33_12430 PF00005 ABC transporter KYK33_12430 PF03412 Peptidase C39 family KYK33_12435 PF04055 Radical SAM superfamily KYK33_12435 PF16199 Radical_SAM C-terminal domain KYK33_12440 PF01493 GXGXG motif KYK33_12440 PF00310 Glutamine amidotransferases class-II KYK33_12440 PF04898 Glutamate synthase central domain KYK33_12440 PF01645 Conserved region in glutamate synthase KYK33_12445 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KYK33_12445 PF07992 Pyridine nucleotide-disulphide oxidoreductase KYK33_12450 PF01048 Phosphorylase superfamily KYK33_12460 PF01497 Periplasmic binding protein KYK33_12470 PF02719 Polysaccharide biosynthesis protein KYK33_12475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KYK33_12480 PF02348 Cytidylyltransferase KYK33_12485 PF02585 GlcNAc-PI de-N-acetylase KYK33_12495 PF08666 SAF domain KYK33_12495 PF03102 NeuB family KYK33_12505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KYK33_12535 PF02561 Flagellar protein FliS KYK33_12540 PF07195 Flagellar hook-associated protein 2 C-terminus KYK33_12540 PF02465 Flagellar hook-associated protein 2 N-terminus KYK33_12540 PF07196 Flagellin hook IN motif KYK33_12550 PF00700 Bacterial flagellin C-terminal helical region KYK33_12550 PF07196 Flagellin hook IN motif KYK33_12550 PF00669 Bacterial flagellin N-terminal helical region KYK33_12555 PF00700 Bacterial flagellin C-terminal helical region KYK33_12555 PF07196 Flagellin hook IN motif KYK33_12555 PF00669 Bacterial flagellin N-terminal helical region KYK33_12560 PF00669 Bacterial flagellin N-terminal helical region KYK33_12560 PF00700 Bacterial flagellin C-terminal helical region KYK33_12560 PF07196 Flagellin hook IN motif KYK33_12565 PF03458 UPF0126 domain KYK33_12575 PF02568 Thiamine biosynthesis protein (ThiI) KYK33_12575 PF02926 THUMP domain KYK33_12590 PF00563 EAL domain KYK33_12590 PF03707 Bacterial signalling protein N terminal repeat KYK33_12590 PF00990 Diguanylate cyclase, GGDEF domain KYK33_12595 PF04055 Radical SAM superfamily KYK33_12605 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_12610 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_12615 PF00497 Bacterial extracellular solute-binding proteins, family 3 KYK33_12620 PF00005 ABC transporter KYK33_12625 PF03956 Lysine exporter LysO KYK33_12630 PF04336 Acyl carrier protein phosphodiesterase KYK33_12640 PF03960 ArsC family KYK33_12645 PF00578 AhpC/TSA family KYK33_12650 PF01435 Peptidase family M48 KYK33_12650 PF13181 Tetratricopeptide repeat KYK33_12655 PF01206 Sulfurtransferase TusA KYK33_12660 PF01594 AI-2E family transporter KYK33_12670 PF00561 alpha/beta hydrolase fold KYK33_12680 PF00005 ABC transporter KYK33_12680 PF08402 TOBE domain KYK33_12685 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_12690 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_12690 PF14785 Maltose transport system permease protein MalF P2 domain KYK33_12695 PF01547 Bacterial extracellular solute-binding protein KYK33_12700 PF04245 37-kD nucleoid-associated bacterial protein KYK33_12705 PF07208 Protein of unknown function (DUF1414) KYK33_12710 PF11893 Domain of unknown function (DUF3413) KYK33_12710 PF00884 Sulfatase KYK33_12715 PF07715 TonB-dependent Receptor Plug Domain KYK33_12715 PF00593 TonB dependent receptor KYK33_12720 PF00326 Prolyl oligopeptidase family KYK33_12720 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KYK33_12740 PF03974 Ecotin KYK33_12745 PF04219 Protein of unknown function, DUF KYK33_12750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_12750 PF03466 LysR substrate binding domain KYK33_12755 PF01817 Chorismate mutase type II KYK33_12755 PF02153 Prephenate dehydrogenase KYK33_12760 PF00793 DAHP synthetase I family KYK33_12765 PF03009 Glycerophosphoryl diester phosphodiesterase family KYK33_12770 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KYK33_12770 PF01266 FAD dependent oxidoreductase KYK33_12775 PF08220 DeoR-like helix-turn-helix domain KYK33_12775 PF00455 DeoR C terminal sensor domain KYK33_12780 PF07690 Major Facilitator Superfamily KYK33_12785 PF00230 Major intrinsic protein KYK33_12790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KYK33_12790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KYK33_12795 PF03466 LysR substrate binding domain KYK33_12795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_12820 PF00248 Aldo/keto reductase family KYK33_12825 PF07690 Major Facilitator Superfamily KYK33_12835 PF02322 Cytochrome bd terminal oxidase subunit II KYK33_12840 PF01654 Cytochrome bd terminal oxidase subunit I KYK33_12845 PF00392 Bacterial regulatory proteins, gntR family KYK33_12845 PF00155 Aminotransferase class I and II KYK33_12855 PF04391 Protein of unknown function (DUF533) KYK33_12860 PF00892 EamA-like transporter family KYK33_12870 PF10689 Protein of unknown function (DUF2496) KYK33_12880 PF03466 LysR substrate binding domain KYK33_12880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_12890 PF07690 Major Facilitator Superfamily KYK33_12895 PF00849 RNA pseudouridylate synthase KYK33_12895 PF01479 S4 domain KYK33_12900 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KYK33_12900 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KYK33_12910 PF06906 Protein of unknown function (DUF1272) KYK33_12925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KYK33_12930 PF03707 Bacterial signalling protein N terminal repeat KYK33_12930 PF00563 EAL domain KYK33_12930 PF00990 Diguanylate cyclase, GGDEF domain KYK33_12935 PF17810 Arginine decarboxylase helical bundle domain KYK33_12935 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KYK33_12935 PF17944 Arginine decarboxylase C-terminal helical extension KYK33_12940 PF07687 Peptidase dimerisation domain KYK33_12940 PF01546 Peptidase family M20/M25/M40 KYK33_12965 PF04264 YceI-like domain KYK33_12970 PF03466 LysR substrate binding domain KYK33_12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_12980 PF01268 Formate--tetrahydrofolate ligase KYK33_12985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_12985 PF00672 HAMP domain KYK33_12990 PF00672 HAMP domain KYK33_12990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_12990 PF17200 Single Cache domain 2 KYK33_12995 PF01227 GTP cyclohydrolase I KYK33_13000 PF03453 MoeA N-terminal region (domain I and II) KYK33_13000 PF00994 Probable molybdopterin binding domain KYK33_13000 PF03454 MoeA C-terminal region (domain IV) KYK33_13005 PF00899 ThiF family KYK33_13015 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KYK33_13025 PF16385 Domain of unknown function KYK33_13025 PF00884 Sulfatase KYK33_13030 PF04055 Radical SAM superfamily KYK33_13030 PF13186 Iron-sulfur cluster-binding domain KYK33_13040 PF06406 StbA protein KYK33_13045 PF12697 Alpha/beta hydrolase family KYK33_13050 PF03459 TOBE domain KYK33_13050 PF00005 ABC transporter KYK33_13055 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_13065 PF02391 MoaE protein KYK33_13070 PF02597 ThiS family KYK33_13075 PF01967 MoaC family KYK33_13080 PF00994 Probable molybdopterin binding domain KYK33_13085 PF03264 NapC/NirT cytochrome c family, N-terminal region KYK33_13090 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) KYK33_13095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KYK33_13095 PF00384 Molybdopterin oxidoreductase KYK33_13095 PF01568 Molydopterin dinucleotide binding domain KYK33_13095 PF10518 TAT (twin-arginine translocation) pathway signal sequence KYK33_13110 PF12838 4Fe-4S dicluster domain KYK33_13110 PF13187 4Fe-4S dicluster domain KYK33_13115 PF06463 Molybdenum Cofactor Synthesis C KYK33_13115 PF04055 Radical SAM superfamily KYK33_13120 PF00672 HAMP domain KYK33_13120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_13120 PF07730 Histidine kinase KYK33_13120 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KYK33_13125 PF00072 Response regulator receiver domain KYK33_13125 PF00196 Bacterial regulatory proteins, luxR family KYK33_13130 PF00816 H-NS histone family KYK33_13155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_13155 PF00512 His Kinase A (phospho-acceptor) domain KYK33_13155 PF09456 RcsC Alpha-Beta-Loop (ABL) KYK33_13155 PF00072 Response regulator receiver domain KYK33_13165 PF01933 Uncharacterised protein family UPF0052 KYK33_13175 PF01784 NIF3 (NGG1p interacting factor 3) KYK33_13180 PF00158 Sigma-54 interaction domain KYK33_13180 PF00072 Response regulator receiver domain KYK33_13180 PF02954 Bacterial regulatory protein, Fis family KYK33_13185 PF13188 PAS domain KYK33_13185 PF00512 His Kinase A (phospho-acceptor) domain KYK33_13185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_13190 PF06490 Flagellar regulatory protein FleQ KYK33_13190 PF02954 Bacterial regulatory protein, Fis family KYK33_13190 PF00158 Sigma-54 interaction domain KYK33_13205 PF13090 Polyphosphate kinase C-terminal domain 2 KYK33_13205 PF02503 Polyphosphate kinase middle domain KYK33_13205 PF17941 Polyphosphate kinase C-terminal domain 1 KYK33_13205 PF13089 Polyphosphate kinase N-terminal domain KYK33_13210 PF02541 Ppx/GppA phosphatase family KYK33_13215 PF03448 MgtE intracellular N domain KYK33_13215 PF00571 CBS domain KYK33_13215 PF01769 Divalent cation transporter KYK33_13225 PF00460 Flagella basal body rod protein KYK33_13225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KYK33_13230 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KYK33_13230 PF10135 Rod binding protein KYK33_13235 PF02119 Flagellar P-ring protein KYK33_13240 PF02107 Flagellar L-ring protein KYK33_13245 PF00460 Flagella basal body rod protein KYK33_13245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KYK33_13250 PF00460 Flagella basal body rod protein KYK33_13250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KYK33_13255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KYK33_13255 PF00460 Flagella basal body rod protein KYK33_13255 PF07559 Flagellar basal body protein FlaE KYK33_13265 PF00460 Flagella basal body rod protein KYK33_13265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KYK33_13270 PF00460 Flagella basal body rod protein KYK33_13275 PF01739 CheR methyltransferase, SAM binding domain KYK33_13275 PF03705 CheR methyltransferase, all-alpha domain KYK33_13280 PF01584 CheW-like domain KYK33_13280 PF00072 Response regulator receiver domain KYK33_13285 PF13144 Chaperone for flagella basal body P-ring formation KYK33_13300 PF12850 Calcineurin-like phosphoesterase superfamily domain KYK33_13305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KYK33_13315 PF01479 S4 domain KYK33_13315 PF00849 RNA pseudouridylate synthase KYK33_13320 PF01966 HD domain KYK33_13320 PF11871 Domain of unknown function (DUF3391) KYK33_13330 PF00892 EamA-like transporter family KYK33_13335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KYK33_13360 PF00313 'Cold-shock' DNA-binding domain KYK33_13365 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KYK33_13365 PF00364 Biotin-requiring enzyme KYK33_13365 PF02817 e3 binding domain KYK33_13370 PF02779 Transketolase, pyrimidine binding domain KYK33_13370 PF02780 Transketolase, C-terminal domain KYK33_13375 PF00676 Dehydrogenase E1 component KYK33_13380 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KYK33_13390 PF07690 Major Facilitator Superfamily KYK33_13395 PF00196 Bacterial regulatory proteins, luxR family KYK33_13395 PF00072 Response regulator receiver domain KYK33_13400 PF05231 MASE1 KYK33_13400 PF07730 Histidine kinase KYK33_13400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_13405 PF07690 Major Facilitator Superfamily KYK33_13410 PF05472 DNA replication terminus site-binding protein (Ter protein) KYK33_13415 PF00271 Helicase conserved C-terminal domain KYK33_13415 PF00176 SNF2 family N-terminal domain KYK33_13415 PF04434 SWIM zinc finger KYK33_13420 PF04337 Protein of unknown function, DUF480 KYK33_13430 PF02706 Chain length determinant protein KYK33_13435 PF01370 NAD dependent epimerase/dehydratase family KYK33_13440 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KYK33_13440 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KYK33_13440 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KYK33_13445 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KYK33_13460 PF02719 Polysaccharide biosynthesis protein KYK33_13465 PF02397 Bacterial sugar transferase KYK33_13470 PF01370 NAD dependent epimerase/dehydratase family KYK33_13480 PF01370 NAD dependent epimerase/dehydratase family KYK33_13485 PF00132 Bacterial transferase hexapeptide (six repeats) KYK33_13490 PF00535 Glycosyl transferase family 2 KYK33_13495 PF00535 Glycosyl transferase family 2 KYK33_13505 PF00535 Glycosyl transferase family 2 KYK33_13520 PF08323 Starch synthase catalytic domain KYK33_13520 PF00534 Glycosyl transferases group 1 KYK33_13525 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KYK33_13530 PF00483 Nucleotidyl transferase KYK33_13535 PF04321 RmlD substrate binding domain KYK33_13540 PF16363 GDP-mannose 4,6 dehydratase KYK33_13545 PF00180 Isocitrate/isopropylmalate dehydrogenase KYK33_13550 PF01497 Periplasmic binding protein KYK33_13555 PF01032 FecCD transport family KYK33_13560 PF00005 ABC transporter KYK33_13565 PF07690 Major Facilitator Superfamily KYK33_13570 PF12833 Helix-turn-helix domain KYK33_13575 PF01238 Phosphomannose isomerase type I KYK33_13580 PF00155 Aminotransferase class I and II KYK33_13585 PF00367 phosphotransferase system, EIIB KYK33_13585 PF02378 Phosphotransferase system, EIIC KYK33_13590 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KYK33_13590 PF00356 Bacterial regulatory proteins, lacI family KYK33_13600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KYK33_13600 PF02378 Phosphotransferase system, EIIC KYK33_13600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KYK33_13605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KYK33_13615 PF00849 RNA pseudouridylate synthase KYK33_13620 PF00293 NUDIX domain KYK33_13630 PF04356 Protein of unknown function (DUF489) KYK33_13635 PF08328 Adenylosuccinate lyase C-terminal KYK33_13635 PF00206 Lyase KYK33_13640 PF08007 Cupin superfamily protein KYK33_13645 PF13508 Acetyltransferase (GNAT) domain KYK33_13655 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KYK33_13655 PF01243 Pyridoxamine 5'-phosphate oxidase KYK33_13670 PF01189 16S rRNA methyltransferase RsmB/F KYK33_13670 PF01029 NusB family KYK33_13675 PF00462 Glutaredoxin KYK33_13680 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KYK33_13680 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KYK33_13685 PF04333 MlaA lipoprotein KYK33_13690 PF03918 Cytochrome C biogenesis protein KYK33_13695 PF03918 Cytochrome C biogenesis protein KYK33_13700 PF08534 Redoxin KYK33_13705 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KYK33_13705 PF01578 Cytochrome C assembly protein KYK33_13710 PF03100 CcmE KYK33_13715 PF04995 Heme exporter protein D (CcmD) KYK33_13720 PF01578 Cytochrome C assembly protein KYK33_13725 PF03379 CcmB protein KYK33_13730 PF00005 ABC transporter KYK33_13740 PF01584 CheW-like domain KYK33_13750 PF13614 AAA domain KYK33_13755 PF00691 OmpA family KYK33_13755 PF13677 Membrane MotB of proton-channel complex MotA/MotB KYK33_13760 PF01618 MotA/TolQ/ExbB proton channel family KYK33_13765 PF00072 Response regulator receiver domain KYK33_13765 PF01339 CheB methylesterase KYK33_13770 PF01627 Hpt domain KYK33_13770 PF01584 CheW-like domain KYK33_13770 PF02895 Signal transducing histidine kinase, homodimeric domain KYK33_13770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_13770 PF00072 Response regulator receiver domain KYK33_13775 PF04344 Chemotaxis phosphatase, CheZ KYK33_13780 PF00072 Response regulator receiver domain KYK33_13785 PF04542 Sigma-70 region 2 KYK33_13785 PF04545 Sigma-70, region 4 KYK33_13785 PF04539 Sigma-70 region 3 KYK33_13790 PF10609 NUBPL iron-transfer P-loop NTPase KYK33_13795 PF00448 SRP54-type protein, GTPase domain KYK33_13800 PF00771 FHIPEP family KYK33_13805 PF01312 FlhB HrpN YscU SpaS Family KYK33_13810 PF01311 Bacterial export proteins, family 1 KYK33_13815 PF01313 Bacterial export proteins, family 3 KYK33_13820 PF00813 FliP family KYK33_13825 PF04347 Flagellar biosynthesis protein, FliO KYK33_13830 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KYK33_13835 PF02154 Flagellar motor switch protein FliM KYK33_13835 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KYK33_13855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KYK33_13855 PF18269 T3SS EscN ATPase C-terminal domain KYK33_13865 PF01706 FliG C-terminal domain KYK33_13865 PF14841 FliG middle domain KYK33_13865 PF14842 FliG N-terminal domain KYK33_13870 PF01514 Secretory protein of YscJ/FliF family KYK33_13870 PF08345 Flagellar M-ring protein C-terminal KYK33_13875 PF02049 Flagellar hook-basal body complex protein FliE KYK33_13890 PF03960 ArsC family KYK33_13895 PF01758 Sodium Bile acid symporter family KYK33_13905 PF00916 Sulfate permease family KYK33_13905 PF01740 STAS domain KYK33_13915 PF18693 TRAM domain KYK33_13915 PF04055 Radical SAM superfamily KYK33_13915 PF00919 Uncharacterized protein family UPF0004 KYK33_13945 PF00486 Transcriptional regulatory protein, C terminal KYK33_13945 PF00072 Response regulator receiver domain KYK33_13950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_13980 PF02685 Glucokinase KYK33_13985 PF01418 Helix-turn-helix domain, rpiR family KYK33_13985 PF01380 SIS domain KYK33_13990 PF02887 Pyruvate kinase, alpha/beta domain KYK33_13990 PF00224 Pyruvate kinase, barrel domain KYK33_14000 PF00873 AcrB/AcrD/AcrF family KYK33_14005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KYK33_14005 PF02770 Acyl-CoA dehydrogenase, middle domain KYK33_14005 PF09317 Domain of unknown function (DUF1974) KYK33_14005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KYK33_14010 PF00440 Bacterial regulatory proteins, tetR family KYK33_14030 PF00580 UvrD/REP helicase N-terminal domain KYK33_14030 PF13361 UvrD-like helicase C-terminal domain KYK33_14030 PF12705 PD-(D/E)XK nuclease superfamily KYK33_14040 PF01555 DNA methylase KYK33_14055 PF00271 Helicase conserved C-terminal domain KYK33_14055 PF00176 SNF2 family N-terminal domain KYK33_14090 PF04002 RadC-like JAB domain KYK33_14125 PF02796 Helix-turn-helix domain of resolvase KYK33_14125 PF00239 Resolvase, N terminal domain KYK33_14140 PF13148 Protein of unknown function (DUF3987) KYK33_14150 PF05638 Type VI secretion system effector, Hcp KYK33_14155 PF04717 Type VI secretion system, phage-baseplate injector KYK33_14185 PF01418 Helix-turn-helix domain, rpiR family KYK33_14185 PF01380 SIS domain KYK33_14190 PF00232 Glycosyl hydrolase family 1 KYK33_14195 PF13673 Acetyltransferase (GNAT) domain KYK33_14205 PF01266 FAD dependent oxidoreductase KYK33_14210 PF00171 Aldehyde dehydrogenase family KYK33_14215 PF00202 Aminotransferase class-III KYK33_14225 PF00324 Amino acid permease KYK33_14240 PF02690 Na+/Pi-cotransporter KYK33_14245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KYK33_14245 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KYK33_14250 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KYK33_14255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KYK33_14260 PF00300 Histidine phosphatase superfamily (branch 1) KYK33_14270 PF00109 Beta-ketoacyl synthase, N-terminal domain KYK33_14270 PF02801 Beta-ketoacyl synthase, C-terminal domain KYK33_14280 PF11842 Domain of unknown function (DUF3362) KYK33_14280 PF04055 Radical SAM superfamily KYK33_14280 PF08497 Radical SAM N-terminal KYK33_14290 PF00873 AcrB/AcrD/AcrF family KYK33_14295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KYK33_14300 PF01734 Patatin-like phospholipase KYK33_14305 PF00209 Sodium:neurotransmitter symporter family KYK33_14320 PF00691 OmpA family KYK33_14320 PF01389 OmpA-like transmembrane domain KYK33_14325 PF00691 OmpA family KYK33_14325 PF01389 OmpA-like transmembrane domain KYK33_14330 PF00691 OmpA family KYK33_14330 PF01389 OmpA-like transmembrane domain KYK33_14335 PF00390 Malic enzyme, N-terminal domain KYK33_14335 PF03949 Malic enzyme, NAD binding domain KYK33_14340 PF12833 Helix-turn-helix domain KYK33_14345 PF01554 MatE KYK33_14350 PF10692 Protein of unknown function (DUF2498) KYK33_14355 PF00990 Diguanylate cyclase, GGDEF domain KYK33_14360 PF00860 Permease family KYK33_14370 PF01235 Sodium:alanine symporter family KYK33_14375 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KYK33_14375 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KYK33_14380 PF01699 Sodium/calcium exchanger protein KYK33_14385 PF08534 Redoxin KYK33_14390 PF00293 NUDIX domain KYK33_14395 PF00005 ABC transporter KYK33_14400 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_14405 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_14410 PF00497 Bacterial extracellular solute-binding proteins, family 3 KYK33_14430 PF00005 ABC transporter KYK33_14435 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KYK33_14435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KYK33_14440 PF03932 CutC family KYK33_14445 PF00480 ROK family KYK33_14460 PF12849 PBP superfamily domain KYK33_14465 PF11808 Phosphate regulon sensor protein PhoR KYK33_14465 PF00989 PAS fold KYK33_14465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_14465 PF00512 His Kinase A (phospho-acceptor) domain KYK33_14470 PF00072 Response regulator receiver domain KYK33_14470 PF00486 Transcriptional regulatory protein, C terminal KYK33_14475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KYK33_14480 PF01575 MaoC like domain KYK33_14485 PF05971 RNA methyltransferase KYK33_14490 PF00877 NlpC/P60 family KYK33_14500 PF00085 Thioredoxin KYK33_14510 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KYK33_14515 PF00551 Formyl transferase KYK33_14515 PF01842 ACT domain KYK33_14530 PF13091 PLD-like domain KYK33_14530 PF13396 Phospholipase_D-nuclease N-terminal KYK33_14535 PF07273 Protein of unknown function (DUF1439) KYK33_14545 PF01464 Transglycosylase SLT domain KYK33_14550 PF00230 Major intrinsic protein KYK33_14555 PF02075 Crossover junction endodeoxyribonuclease RuvC KYK33_14560 PF00990 Diguanylate cyclase, GGDEF domain KYK33_14565 PF01590 GAF domain KYK33_14565 PF00158 Sigma-54 interaction domain KYK33_14565 PF02954 Bacterial regulatory protein, Fis family KYK33_14570 PF00171 Aldehyde dehydrogenase family KYK33_14580 PF00892 EamA-like transporter family KYK33_14585 PF01047 MarR family KYK33_14590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KYK33_14590 PF00529 HlyD membrane-fusion protein of T1SS KYK33_14605 PF01679 Proteolipid membrane potential modulator KYK33_14615 PF03477 ATP cone domain KYK33_14615 PF13597 Anaerobic ribonucleoside-triphosphate reductase KYK33_14620 PF00533 BRCA1 C Terminus (BRCT) domain KYK33_14620 PF01653 NAD-dependent DNA ligase adenylation domain KYK33_14620 PF03120 NAD-dependent DNA ligase OB-fold domain KYK33_14620 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KYK33_14620 PF12826 Helix-hairpin-helix motif KYK33_14625 PF04354 ZipA, C-terminal FtsZ-binding domain KYK33_14630 PF02463 RecF/RecN/SMC N terminal domain KYK33_14630 PF06470 SMC proteins Flexible Hinge Domain KYK33_14640 PF03458 UPF0126 domain KYK33_14650 PF05951 Bacterial protein of unknown function (DUF882) KYK33_14655 PF01471 Putative peptidoglycan binding domain KYK33_14655 PF03734 L,D-transpeptidase catalytic domain KYK33_14670 PF00535 Glycosyl transferase family 2 KYK33_14685 PF00128 Alpha amylase, catalytic domain KYK33_14695 PF00072 Response regulator receiver domain KYK33_14695 PF00196 Bacterial regulatory proteins, luxR family KYK33_14710 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase KYK33_14720 PF00535 Glycosyl transferase family 2 KYK33_14730 PF02080 TrkA-C domain KYK33_14730 PF02254 TrkA-N domain KYK33_14730 PF00999 Sodium/hydrogen exchanger family KYK33_14735 PF00990 Diguanylate cyclase, GGDEF domain KYK33_14740 PF01171 PP-loop family KYK33_14740 PF09179 TilS substrate binding domain KYK33_14740 PF11734 TilS substrate C-terminal domain KYK33_14745 PF01431 Peptidase family M13 KYK33_14745 PF05649 Peptidase family M13 KYK33_14755 PF16326 ABC transporter C-terminal domain KYK33_14755 PF12848 ABC transporter KYK33_14755 PF00005 ABC transporter KYK33_14760 PF13520 Amino acid permease KYK33_14765 PF01037 Lrp/AsnC ligand binding domain KYK33_14775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_14775 PF03466 LysR substrate binding domain KYK33_14785 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KYK33_14790 PF02811 PHP domain KYK33_14790 PF07733 Bacterial DNA polymerase III alpha NTPase domain KYK33_14790 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KYK33_14790 PF14579 Helix-hairpin-helix motif KYK33_14790 PF01336 OB-fold nucleic acid binding domain KYK33_14795 PF01351 Ribonuclease HII KYK33_14800 PF02684 Lipid-A-disaccharide synthetase KYK33_14805 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KYK33_14805 PF00132 Bacterial transferase hexapeptide (six repeats) KYK33_14810 PF07977 FabA-like domain KYK33_14815 PF00132 Bacterial transferase hexapeptide (six repeats) KYK33_14815 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KYK33_14820 PF03938 Outer membrane protein (OmpH-like) KYK33_14825 PF01103 Surface antigen KYK33_14825 PF07244 Surface antigen variable number repeat KYK33_14830 PF02163 Peptidase family M50 KYK33_14830 PF17820 PDZ domain KYK33_14835 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KYK33_14835 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KYK33_14835 PF13288 DXP reductoisomerase C-terminal domain KYK33_14845 PF01255 Putative undecaprenyl diphosphate synthase KYK33_14850 PF01765 Ribosome recycling factor KYK33_14855 PF00696 Amino acid kinase family KYK33_14860 PF00889 Elongation factor TS KYK33_14865 PF00318 Ribosomal protein S2 KYK33_14870 PF00557 Metallopeptidase family M24 KYK33_14875 PF01966 HD domain KYK33_14875 PF01909 Nucleotidyltransferase domain KYK33_14875 PF08335 GlnD PII-uridylyltransferase KYK33_14875 PF01842 ACT domain KYK33_14880 PF00132 Bacterial transferase hexapeptide (six repeats) KYK33_14880 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KYK33_14880 PF14602 Hexapeptide repeat of succinyl-transferase KYK33_14885 PF11944 Protein of unknown function (DUF3461) KYK33_14890 PF00367 phosphotransferase system, EIIB KYK33_14890 PF02378 Phosphotransferase system, EIIC KYK33_14895 PF07148 Maltose operon periplasmic protein precursor (MalM) KYK33_14900 PF02264 LamB porin KYK33_14905 PF00258 Flavodoxin KYK33_14910 PF00849 RNA pseudouridylate synthase KYK33_14915 PF04287 tRNA pseudouridine synthase C KYK33_14940 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) KYK33_14945 PF07348 Syd protein (SUKH-2) KYK33_14950 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KYK33_14950 PF14489 QueF-like protein KYK33_14960 PF00990 Diguanylate cyclase, GGDEF domain KYK33_14965 PF03641 Possible lysine decarboxylase KYK33_14965 PF11892 Domain of unknown function (DUF3412) KYK33_14965 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases KYK33_14970 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KYK33_14970 PF01367 5'-3' exonuclease, C-terminal SAM fold KYK33_14975 PF18324 Hypothetical protein TT1725 KYK33_14975 PF00180 Isocitrate/isopropylmalate dehydrogenase KYK33_14985 PF01728 FtsJ-like methyltransferase KYK33_14985 PF18125 RlmM ferredoxin-like domain KYK33_14990 PF04241 Protein of unknown function (DUF423) KYK33_15000 PF03466 LysR substrate binding domain KYK33_15000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_15005 PF00672 HAMP domain KYK33_15005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_15010 PF00817 impB/mucB/samB family KYK33_15010 PF11799 impB/mucB/samB family C-terminal domain KYK33_15010 PF11798 IMS family HHH motif KYK33_15020 PF04400 (Na+)-NQR maturation NqrM KYK33_15025 PF02424 ApbE family KYK33_15030 PF00111 2Fe-2S iron-sulfur cluster binding domain KYK33_15030 PF00175 Oxidoreductase NAD-binding domain KYK33_15030 PF00970 Oxidoreductase FAD-binding domain KYK33_15035 PF02508 Rnf-Nqr subunit, membrane protein KYK33_15040 PF02508 Rnf-Nqr subunit, membrane protein KYK33_15045 PF04205 FMN-binding domain KYK33_15050 PF03116 NQR2, RnfD, RnfE family KYK33_15055 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) KYK33_15055 PF11973 NQRA C-terminal domain KYK33_15060 PF01722 BolA-like protein KYK33_15065 PF05175 Methyltransferase small domain KYK33_15075 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KYK33_15085 PF07690 Major Facilitator Superfamily KYK33_15090 PF03502 Nucleoside-specific channel-forming protein, Tsx KYK33_15095 PF04461 Protein of unknown function (DUF520) KYK33_15100 PF02558 Ketopantoate reductase PanE/ApbA KYK33_15100 PF08546 Ketopantoate reductase PanE/ApbA C terminal KYK33_15105 PF01965 DJ-1/PfpI family KYK33_15110 PF00579 tRNA synthetases class I (W and Y) KYK33_15115 PF01551 Peptidase family M23 KYK33_15115 PF01476 LysM domain KYK33_15115 PF08525 Opacity-associated protein A N-terminal motif KYK33_15120 PF03702 Anhydro-N-acetylmuramic acid kinase KYK33_15130 PF01042 Endoribonuclease L-PSP KYK33_15140 PF02779 Transketolase, pyrimidine binding domain KYK33_15140 PF02780 Transketolase, C-terminal domain KYK33_15140 PF00456 Transketolase, thiamine diphosphate binding domain KYK33_15145 PF00438 S-adenosylmethionine synthetase, N-terminal domain KYK33_15145 PF02772 S-adenosylmethionine synthetase, central domain KYK33_15145 PF02773 S-adenosylmethionine synthetase, C-terminal domain KYK33_15150 PF17283 SprT-like zinc ribbon domain KYK33_15150 PF10263 SprT-like family KYK33_15155 PF04231 Endonuclease I KYK33_15160 PF04452 RNA methyltransferase KYK33_15165 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KYK33_15165 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KYK33_15170 PF02622 Uncharacterized ACR, COG1678 KYK33_15175 PF03652 Holliday junction resolvase KYK33_15180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_15180 PF03466 LysR substrate binding domain KYK33_15190 PF00144 Beta-lactamase KYK33_15195 PF01235 Sodium:alanine symporter family KYK33_15200 PF00923 Transaldolase/Fructose-6-phosphate aldolase KYK33_15215 PF03167 Uracil DNA glycosylase superfamily KYK33_15220 PF01228 Glycine radical KYK33_15225 PF00793 DAHP synthetase I family KYK33_15230 PF13369 Transglutaminase-like superfamily KYK33_15240 PF13847 Methyltransferase domain KYK33_15240 PF17827 PrmC N-terminal domain KYK33_15245 PF03462 PCRF domain KYK33_15245 PF00472 RF-1 domain KYK33_15250 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KYK33_15250 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KYK33_15250 PF01488 Shikimate / quinate 5-dehydrogenase KYK33_15255 PF03550 Outer membrane lipoprotein LolB KYK33_15260 PF08544 GHMP kinases C terminal KYK33_15260 PF00288 GHMP kinases N terminal domain KYK33_15270 PF14572 Phosphoribosyl synthetase-associated domain KYK33_15270 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KYK33_15275 PF01195 Peptidyl-tRNA hydrolase KYK33_15280 PF01926 50S ribosome-binding GTPase KYK33_15280 PF06071 Protein of unknown function (DUF933) KYK33_15325 PF02080 TrkA-C domain KYK33_15325 PF03600 Citrate transporter KYK33_15330 PF07690 Major Facilitator Superfamily KYK33_15335 PF13419 Haloacid dehalogenase-like hydrolase KYK33_15350 PF00171 Aldehyde dehydrogenase family KYK33_15355 PF04958 Arginine N-succinyltransferase beta subunit KYK33_15360 PF00202 Aminotransferase class-III KYK33_15365 PF00117 Glutamine amidotransferase class-I KYK33_15370 PF04962 KduI/IolB family KYK33_15380 PF10688 Bacterial inner membrane protein KYK33_15385 PF01614 Bacterial transcriptional regulator KYK33_15385 PF09339 IclR helix-turn-helix domain KYK33_15390 PF00294 pfkB family carbohydrate kinase KYK33_15395 PF01081 KDPG and KHG aldolase KYK33_15400 PF04074 YhcH/YjgK/YiaL KYK33_15405 PF03480 Bacterial extracellular solute-binding protein, family 7 KYK33_15415 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KYK33_15425 PF00579 tRNA synthetases class I (W and Y) KYK33_15430 PF13419 Haloacid dehalogenase-like hydrolase KYK33_15435 PF00834 Ribulose-phosphate 3 epimerase family KYK33_15445 PF02086 D12 class N6 adenine-specific DNA methyltransferase KYK33_15455 PF01761 3-dehydroquinate synthase KYK33_15460 PF01202 Shikimate kinase KYK33_15465 PF03958 Bacterial type II/III secretion system short domain KYK33_15465 PF07660 Secretin and TonB N terminus short domain KYK33_15465 PF11741 AMIN domain KYK33_15465 PF00263 Bacterial type II and III secretion system protein KYK33_15475 PF04350 Pilus assembly protein, PilO KYK33_15490 PF17092 Penicillin-binding protein OB-like domain KYK33_15490 PF00912 Transglycosylase KYK33_15490 PF00905 Penicillin binding protein transpeptidase domain KYK33_15495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_15495 PF03466 LysR substrate binding domain KYK33_15510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_15510 PF03466 LysR substrate binding domain KYK33_15525 PF02753 Pili assembly chaperone PapD, C-terminal domain KYK33_15525 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KYK33_15530 PF13954 PapC N-terminal domain KYK33_15530 PF00577 Outer membrane usher protein KYK33_15530 PF13953 PapC C-terminal domain KYK33_15535 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KYK33_15535 PF02753 Pili assembly chaperone PapD, C-terminal domain KYK33_15545 PF01476 LysM domain KYK33_15545 PF01551 Peptidase family M23 KYK33_15545 PF08525 Opacity-associated protein A N-terminal motif KYK33_15555 PF12794 Mechanosensitive ion channel inner membrane domain 1 KYK33_15555 PF00924 Mechanosensitive ion channel KYK33_15555 PF12795 Mechanosensitive ion channel porin domain KYK33_15560 PF03009 Glycerophosphoryl diester phosphodiesterase family KYK33_15565 PF00672 HAMP domain KYK33_15565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_15565 PF02743 Cache domain KYK33_15575 PF13183 4Fe-4S dicluster domain KYK33_15575 PF13085 2Fe-2S iron-sulfur cluster binding domain KYK33_15585 PF02313 Fumarate reductase subunit D KYK33_15595 PF06224 Winged helix DNA-binding domain KYK33_15610 PF00501 AMP-binding enzyme KYK33_15630 PF00072 Response regulator receiver domain KYK33_15630 PF00486 Transcriptional regulatory protein, C terminal KYK33_15635 PF08521 Two-component sensor kinase N-terminal KYK33_15635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_15635 PF00512 His Kinase A (phospho-acceptor) domain KYK33_15640 PF08443 RimK-like ATP-grasp domain KYK33_15640 PF18030 RimK PreATP-grasp domain KYK33_15645 PF00478 IMP dehydrogenase / GMP reductase domain KYK33_15655 PF09285 Elongation factor P, C-terminal KYK33_15655 PF01132 Elongation factor P (EF-P) OB domain KYK33_15655 PF08207 Elongation factor P (EF-P) KOW-like domain KYK33_15665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KYK33_15665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KYK33_15670 PF03009 Glycerophosphoryl diester phosphodiesterase family KYK33_15685 PF13419 Haloacid dehalogenase-like hydrolase KYK33_15695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_15695 PF03466 LysR substrate binding domain KYK33_15705 PF00857 Isochorismatase family KYK33_15710 PF01494 FAD binding domain KYK33_15715 PF00919 Uncharacterized protein family UPF0004 KYK33_15715 PF01938 TRAM domain KYK33_15715 PF04055 Radical SAM superfamily KYK33_15720 PF02562 PhoH-like protein KYK33_15725 PF02130 Uncharacterized protein family UPF0054 KYK33_15730 PF00571 CBS domain KYK33_15730 PF03471 Transporter associated domain KYK33_15735 PF00795 Carbon-nitrogen hydrolase KYK33_15740 PF07295 Zinc-ribbon containing domain KYK33_15745 PF08264 Anticodon-binding domain of tRNA KYK33_15745 PF00133 tRNA synthetases class I (I, L, M and V) KYK33_15745 PF13603 Leucyl-tRNA synthetase, Domain 2 KYK33_15770 PF06144 DNA polymerase III, delta subunit KYK33_15770 PF14840 Processivity clamp loader gamma complex DNA pol III C-term KYK33_15775 PF01467 Cytidylyltransferase-like KYK33_15785 PF02590 Predicted SPOUT methyltransferase KYK33_15790 PF03717 Penicillin-binding Protein dimerisation domain KYK33_15790 PF00905 Penicillin binding protein transpeptidase domain KYK33_15795 PF01098 Cell cycle protein KYK33_15800 PF13406 Transglycosylase SLT domain KYK33_15805 PF03330 Lytic transglycolase KYK33_15805 PF05036 Sporulation related domain KYK33_15810 PF07943 Penicillin-binding protein 5, C-terminal domain KYK33_15810 PF00768 D-alanyl-D-alanine carboxypeptidase KYK33_15815 PF04359 Protein of unknown function (DUF493) KYK33_15820 PF03099 Biotin/lipoate A/B protein ligase family KYK33_15825 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KYK33_15825 PF04055 Radical SAM superfamily KYK33_15835 PF06821 Serine hydrolase KYK33_15840 PF17768 RecJ OB domain KYK33_15840 PF01368 DHH family KYK33_15840 PF02272 DHHA1 domain KYK33_15845 PF01741 Large-conductance mechanosensitive channel, MscL KYK33_15850 PF00990 Diguanylate cyclase, GGDEF domain KYK33_15855 PF02899 Phage integrase, N-terminal SAM-like domain KYK33_15855 PF00589 Phage integrase family KYK33_15860 PF00258 Flavodoxin KYK33_15865 PF01523 Putative modulator of DNA gyrase KYK33_15870 PF01523 Putative modulator of DNA gyrase KYK33_15880 PF17969 L,D-transpeptidase C-terminal domain KYK33_15880 PF03734 L,D-transpeptidase catalytic domain KYK33_15890 PF00384 Molybdopterin oxidoreductase KYK33_15890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KYK33_15890 PF01568 Molydopterin dinucleotide binding domain KYK33_15895 PF03916 Polysulphide reductase, NrfD KYK33_15900 PF13247 4Fe-4S dicluster domain KYK33_15905 PF00989 PAS fold KYK33_15905 PF00512 His Kinase A (phospho-acceptor) domain KYK33_15905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_15910 PF00072 Response regulator receiver domain KYK33_15910 PF00196 Bacterial regulatory proteins, luxR family KYK33_15915 PF03575 Peptidase family S51 KYK33_15920 PF07690 Major Facilitator Superfamily KYK33_15925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KYK33_15925 PF00529 HlyD membrane-fusion protein of T1SS KYK33_15935 PF10415 Fumarase C C-terminus KYK33_15935 PF00206 Lyase KYK33_15945 PF00171 Aldehyde dehydrogenase family KYK33_15945 PF01619 Proline dehydrogenase KYK33_15945 PF14850 DNA-binding domain of Proline dehydrogenase KYK33_15945 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KYK33_15950 PF00842 Alanine racemase, C-terminal domain KYK33_15950 PF01168 Alanine racemase, N-terminal domain KYK33_15955 PF00772 DnaB-like helicase N terminal domain KYK33_15955 PF03796 DnaB-like helicase C terminal domain KYK33_15970 PF00563 EAL domain KYK33_15970 PF12792 CSS motif domain associated with EAL KYK33_15975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_15975 PF02743 Cache domain KYK33_15975 PF00672 HAMP domain KYK33_15985 PF00152 tRNA synthetases class II (D, K and N) KYK33_15985 PF01336 OB-fold nucleic acid binding domain KYK33_15995 PF00667 FAD binding domain KYK33_15995 PF00258 Flavodoxin KYK33_15995 PF00175 Oxidoreductase NAD-binding domain KYK33_16000 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KYK33_16000 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KYK33_16005 PF01507 Phosphoadenosine phosphosulfate reductase family KYK33_16015 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KYK33_16020 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_16025 PF00005 ABC transporter KYK33_16025 PF00571 CBS domain KYK33_16030 PF00296 Luciferase-like monooxygenase KYK33_16035 PF01966 HD domain KYK33_16040 PF00501 AMP-binding enzyme KYK33_16040 PF13193 AMP-binding enzyme C-terminal domain KYK33_16045 PF07670 Nucleoside recognition KYK33_16050 PF01926 50S ribosome-binding GTPase KYK33_16050 PF01018 GTP1/OBG KYK33_16055 PF01016 Ribosomal L27 protein KYK33_16060 PF00829 Ribosomal prokaryotic L21 protein KYK33_16065 PF00348 Polyprenyl synthetase KYK33_16070 PF01145 SPFH domain / Band 7 family KYK33_16075 PF01145 SPFH domain / Band 7 family KYK33_16075 PF12221 Bacterial membrane protein N terminal KYK33_16080 PF16360 GTP-binding GTPase Middle Region KYK33_16080 PF13167 GTP-binding GTPase N-terminal KYK33_16080 PF01926 50S ribosome-binding GTPase KYK33_16085 PF17209 Hfq protein KYK33_16095 PF01119 DNA mismatch repair protein, C-terminal domain KYK33_16095 PF08676 MutL C terminal dimerisation domain KYK33_16100 PF01520 N-acetylmuramoyl-L-alanine amidase KYK33_16105 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KYK33_16110 PF03853 YjeF-related protein N-terminus KYK33_16110 PF01256 Carbohydrate kinase KYK33_16115 PF08331 Domain of unknown function (DUF1730) KYK33_16120 PF00480 ROK family KYK33_16125 PF01048 Phosphorylase superfamily KYK33_16165 PF00929 Exonuclease KYK33_16170 PF03193 RsgA GTPase KYK33_16175 PF02666 Phosphatidylserine decarboxylase KYK33_16180 PF09905 DNA-binding protein VF530 KYK33_16195 PF00563 EAL domain KYK33_16195 PF00990 Diguanylate cyclase, GGDEF domain KYK33_16195 PF03707 Bacterial signalling protein N terminal repeat KYK33_16200 PF06877 Regulator of ribonuclease activity B KYK33_16205 PF00801 PKD domain KYK33_16205 PF05547 Immune inhibitor A peptidase M6 KYK33_16220 PF00561 alpha/beta hydrolase fold KYK33_16225 PF00664 ABC transporter transmembrane region KYK33_16225 PF00005 ABC transporter KYK33_16230 PF06004 Bacterial protein of unknown function (DUF903) KYK33_16250 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF KYK33_16255 PF06251 Capsule biosynthesis GfcC KYK33_16260 PF06082 Exopolysaccharide biosynthesis protein YbjH KYK33_16265 PF00581 Rhodanese-like domain KYK33_16270 PF04960 Glutaminase KYK33_16275 PF04320 Protein with unknown function (DUF469) KYK33_16280 PF02390 Putative methyltransferase KYK33_16290 PF00155 Aminotransferase class I and II KYK33_16295 PF00563 EAL domain KYK33_16295 PF12792 CSS motif domain associated with EAL KYK33_16300 PF10369 Small subunit of acetolactate synthase KYK33_16305 PF00205 Thiamine pyrophosphate enzyme, central domain KYK33_16305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KYK33_16305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KYK33_16320 PF01569 PAP2 superfamily KYK33_16330 PF08502 LeuA allosteric (dimerisation) domain KYK33_16330 PF00682 HMGL-like KYK33_16335 PF00180 Isocitrate/isopropylmalate dehydrogenase KYK33_16340 PF00330 Aconitase family (aconitate hydratase) KYK33_16345 PF00694 Aconitase C-terminal domain KYK33_16365 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_16370 PF00005 ABC transporter KYK33_16375 PF02562 PhoH-like protein KYK33_16375 PF13638 PIN domain KYK33_16405 PF00271 Helicase conserved C-terminal domain KYK33_16405 PF12137 RNA polymerase recycling family C-terminal KYK33_16405 PF00176 SNF2 family N-terminal domain KYK33_16405 PF18339 RapA N-terminal Tudor like domain 1 KYK33_16405 PF18337 RapA N-terminal Tudor like domain KYK33_16410 PF00849 RNA pseudouridylate synthase KYK33_16420 PF00563 EAL domain KYK33_16420 PF00990 Diguanylate cyclase, GGDEF domain KYK33_16420 PF03707 Bacterial signalling protein N terminal repeat KYK33_16430 PF00118 TCP-1/cpn60 chaperonin family KYK33_16435 PF00166 Chaperonin 10 Kd subunit KYK33_16440 PF01554 MatE KYK33_16450 PF10415 Fumarase C C-terminus KYK33_16450 PF00206 Lyase KYK33_16455 PF03605 Anaerobic c4-dicarboxylate membrane transporter KYK33_16460 PF00267 Gram-negative porin KYK33_16465 PF07690 Major Facilitator Superfamily KYK33_16470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_16470 PF03466 LysR substrate binding domain KYK33_16480 PF07504 Fungalysin/Thermolysin Propeptide Motif KYK33_16480 PF03413 Peptidase propeptide and YPEB domain KYK33_16480 PF01447 Thermolysin metallopeptidase, catalytic domain KYK33_16480 PF02868 Thermolysin metallopeptidase, alpha-helical domain KYK33_16480 PF04151 Bacterial pre-peptidase C-terminal domain KYK33_16485 PF13302 Acetyltransferase (GNAT) domain KYK33_16490 PF13302 Acetyltransferase (GNAT) domain KYK33_16500 PF07690 Major Facilitator Superfamily KYK33_16505 PF00149 Calcineurin-like phosphoesterase KYK33_16510 PF01725 Ham1 family KYK33_16515 PF06969 HemN C-terminal domain KYK33_16515 PF04055 Radical SAM superfamily KYK33_16520 PF03889 Alternative ribosome-rescue factor A KYK33_16525 PF13411 MerR HTH family regulatory protein KYK33_16530 PF01808 AICARFT/IMPCHase bienzyme KYK33_16530 PF02142 MGS-like domain KYK33_16535 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KYK33_16535 PF02843 Phosphoribosylglycinamide synthetase, C domain KYK33_16535 PF02844 Phosphoribosylglycinamide synthetase, N domain KYK33_16540 PF07690 Major Facilitator Superfamily KYK33_16560 PF00128 Alpha amylase, catalytic domain KYK33_16575 PF04546 Sigma-70, non-essential region KYK33_16575 PF03979 Sigma-70 factor, region 1.1 KYK33_16575 PF00140 Sigma-70 factor, region 1.2 KYK33_16575 PF04539 Sigma-70 region 3 KYK33_16575 PF04545 Sigma-70, region 4 KYK33_16575 PF04542 Sigma-70 region 2 KYK33_16580 PF08275 DNA primase catalytic core, N-terminal domain KYK33_16580 PF01807 CHC2 zinc finger KYK33_16580 PF10410 DnaB-helicase binding domain of primase KYK33_16580 PF08278 DNA primase DnaG DnaB-binding KYK33_16585 PF09424 Yqey-like protein KYK33_16590 PF01165 Ribosomal protein S21 KYK33_16595 PF00814 Glycoprotease family KYK33_16600 PF00140 Sigma-70 factor, region 1.2 KYK33_16600 PF04542 Sigma-70 region 2 KYK33_16600 PF04539 Sigma-70 region 3 KYK33_16600 PF04545 Sigma-70, region 4 KYK33_16605 PF01476 LysM domain KYK33_16605 PF01551 Peptidase family M23 KYK33_16610 PF09335 SNARE associated Golgi protein KYK33_16620 PF01975 Survival protein SurE KYK33_16625 PF01142 tRNA pseudouridine synthase D (TruD) KYK33_16630 PF02542 YgbB family KYK33_16635 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KYK33_16640 PF04977 Septum formation initiator KYK33_16645 PF00113 Enolase, C-terminal TIM barrel domain KYK33_16645 PF03952 Enolase, N-terminal domain KYK33_16650 PF06418 CTP synthase N-terminus KYK33_16650 PF00117 Glutamine amidotransferase class-I KYK33_16655 PF03819 MazG nucleotide pyrophosphohydrolase domain KYK33_16660 PF04607 Region found in RelA / SpoT proteins KYK33_16660 PF13291 ACT domain KYK33_16660 PF02824 TGS domain KYK33_16665 PF05958 tRNA (Uracil-5-)-methyltransferase KYK33_16665 PF01938 TRAM domain KYK33_16670 PF00672 HAMP domain KYK33_16670 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KYK33_16670 PF00072 Response regulator receiver domain KYK33_16670 PF01627 Hpt domain KYK33_16670 PF00512 His Kinase A (phospho-acceptor) domain KYK33_16670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_16675 PF07308 Protein of unknown function (DUF1456) KYK33_16680 PF01510 N-acetylmuramoyl-L-alanine amidase KYK33_16685 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KYK33_16690 PF02565 Recombination protein O C terminal KYK33_16690 PF11967 Recombination protein O N terminal KYK33_16695 PF07650 KH domain KYK33_16695 PF01926 50S ribosome-binding GTPase KYK33_16700 PF14622 Ribonuclease-III-like KYK33_16700 PF00035 Double-stranded RNA binding motif KYK33_16705 PF10502 Signal peptidase, peptidase S26 KYK33_16710 PF00009 Elongation factor Tu GTP binding domain KYK33_16710 PF03144 Elongation factor Tu domain 2 KYK33_16710 PF06421 GTP-binding protein LepA C-terminus KYK33_16710 PF00679 Elongation factor G C-terminus KYK33_16720 PF17188 MucB/RseB C-terminal domain KYK33_16720 PF03888 MucB/RseB N-terminal domain KYK33_16725 PF03873 Anti sigma-E protein RseA, C-terminal domain KYK33_16725 PF03872 Anti sigma-E protein RseA, N-terminal domain KYK33_16730 PF04542 Sigma-70 region 2 KYK33_16730 PF08281 Sigma-70, region 4 KYK33_16735 PF00890 FAD binding domain KYK33_16735 PF02910 Fumarate reductase flavoprotein C-term KYK33_16745 PF03937 Flavinator of succinate dehydrogenase KYK33_16750 PF01571 Aminomethyltransferase folate-binding domain KYK33_16755 PF06472 ABC transporter transmembrane region 2 KYK33_16755 PF00005 ABC transporter KYK33_16760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_16760 PF03466 LysR substrate binding domain KYK33_16775 PF03091 CutA1 divalent ion tolerance protein KYK33_16780 PF02683 Cytochrome C biogenesis protein transmembrane region KYK33_16780 PF11412 Disulphide bond corrector protein DsbC KYK33_16800 PF01266 FAD dependent oxidoreductase KYK33_16805 PF01116 Fructose-bisphosphate aldolase class-II KYK33_16810 PF00162 Phosphoglycerate kinase KYK33_16815 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KYK33_16815 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KYK33_16820 PF00480 ROK family KYK33_16825 PF01208 Uroporphyrinogen decarboxylase (URO-D) KYK33_16830 PF00293 NUDIX domain KYK33_16830 PF09297 NADH pyrophosphatase zinc ribbon domain KYK33_16835 PF08239 Bacterial SH3 domain KYK33_16840 PF00027 Cyclic nucleotide-binding domain KYK33_16840 PF00520 Ion transport protein KYK33_16845 PF00672 HAMP domain KYK33_16845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_16855 PF03710 Glutamate-ammonia ligase adenylyltransferase KYK33_16855 PF08335 GlnD PII-uridylyltransferase KYK33_16870 PF05114 Protein of unknown function (DUF692) KYK33_16885 PF01625 Peptide methionine sulfoxide reductase KYK33_16885 PF01641 SelR domain KYK33_16915 PF03060 Nitronate monooxygenase KYK33_16925 PF00445 Ribonuclease T2 family KYK33_16950 PF00270 DEAD/DEAH box helicase KYK33_16950 PF00271 Helicase conserved C-terminal domain KYK33_16965 PF00665 Integrase core domain KYK33_16970 PF01425 Amidase KYK33_16975 PF04371 Porphyromonas-type peptidyl-arginine deiminase KYK33_16980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_16980 PF03466 LysR substrate binding domain KYK33_16985 PF04480 Protein of unknown function (DUF559) KYK33_16995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KYK33_17000 PF00583 Acetyltransferase (GNAT) family KYK33_17005 PF01758 Sodium Bile acid symporter family KYK33_17015 PF00009 Elongation factor Tu GTP binding domain KYK33_17015 PF16658 Class II release factor RF3, C-terminal domain KYK33_17015 PF03144 Elongation factor Tu domain 2 KYK33_17020 PF00990 Diguanylate cyclase, GGDEF domain KYK33_17020 PF00072 Response regulator receiver domain KYK33_17025 PF00563 EAL domain KYK33_17025 PF00990 Diguanylate cyclase, GGDEF domain KYK33_17025 PF13426 PAS domain KYK33_17030 PF01037 Lrp/AsnC ligand binding domain KYK33_17040 PF05762 VWA domain containing CoxE-like protein KYK33_17045 PF07728 AAA domain (dynein-related subfamily) KYK33_17045 PF17868 AAA lid domain KYK33_17045 PF12592 Protein of unknown function (DUF3763) KYK33_17055 PF00583 Acetyltransferase (GNAT) family KYK33_17065 PF00501 AMP-binding enzyme KYK33_17080 PF04262 Glutamate-cysteine ligase KYK33_17085 PF05193 Peptidase M16 inactive domain KYK33_17085 PF00675 Insulinase (Peptidase family M16) KYK33_17090 PF09335 SNARE associated Golgi protein KYK33_17095 PF00698 Acyl transferase domain KYK33_17095 PF08240 Alcohol dehydrogenase GroES-like domain KYK33_17095 PF00107 Zinc-binding dehydrogenase KYK33_17095 PF16197 Ketoacyl-synthetase C-terminal extension KYK33_17095 PF00109 Beta-ketoacyl synthase, N-terminal domain KYK33_17095 PF02801 Beta-ketoacyl synthase, C-terminal domain KYK33_17095 PF08659 KR domain KYK33_17095 PF00550 Phosphopantetheine attachment site KYK33_17095 PF14765 Polyketide synthase dehydratase KYK33_17115 PF00970 Oxidoreductase FAD-binding domain KYK33_17115 PF00175 Oxidoreductase NAD-binding domain KYK33_17120 PF03948 Ribosomal protein L9, C-terminal domain KYK33_17120 PF01281 Ribosomal protein L9, N-terminal domain KYK33_17125 PF01084 Ribosomal protein S18 KYK33_17130 PF01250 Ribosomal protein S6 KYK33_17135 PF01566 Natural resistance-associated macrophage protein KYK33_17140 PF02272 DHHA1 domain KYK33_17140 PF01411 tRNA synthetases class II (A) KYK33_17140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KYK33_17155 PF13673 Acetyltransferase (GNAT) domain KYK33_17165 PF00588 SpoU rRNA Methylase family KYK33_17165 PF08032 RNA 2'-O ribose methyltransferase substrate binding KYK33_17170 PF00575 S1 RNA binding domain KYK33_17170 PF17876 Cold shock domain KYK33_17170 PF00773 RNB domain KYK33_17170 PF08461 Ribonuclease R winged-helix domain KYK33_17170 PF08206 Ribonuclease B OB domain KYK33_17175 PF00990 Diguanylate cyclase, GGDEF domain KYK33_17180 PF02664 S-Ribosylhomocysteinase (LuxS) KYK33_17190 PF00543 Nitrogen regulatory protein P-II KYK33_17195 PF00795 Carbon-nitrogen hydrolase KYK33_17195 PF02540 NAD synthase KYK33_17235 PF02401 LytB protein KYK33_17240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KYK33_17245 PF01252 Signal peptidase (SPase) II KYK33_17250 PF00133 tRNA synthetases class I (I, L, M and V) KYK33_17250 PF08264 Anticodon-binding domain of tRNA KYK33_17250 PF06827 Zinc finger found in FPG and IleRS KYK33_17255 PF06574 FAD synthetase KYK33_17255 PF01687 Riboflavin kinase KYK33_17260 PF03023 Lipid II flippase MurJ KYK33_17265 PF01649 Ribosomal protein S20 KYK33_17270 PF01022 Bacterial regulatory protein, arsR family KYK33_17275 PF03466 LysR substrate binding domain KYK33_17275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_17285 PF06965 Na+/H+ antiporter 1 KYK33_17290 PF00303 Thymidylate synthase KYK33_17295 PF01790 Prolipoprotein diacylglyceryl transferase KYK33_17300 PF01590 GAF domain KYK33_17300 PF05524 PEP-utilising enzyme, N-terminal KYK33_17300 PF00391 PEP-utilising enzyme, mobile domain KYK33_17300 PF02896 PEP-utilising enzyme, TIM barrel domain KYK33_17305 PF00293 NUDIX domain KYK33_17310 PF02976 DNA mismatch repair enzyme MutH KYK33_17320 PF01245 Ribosomal protein L19 KYK33_17325 PF01746 tRNA (Guanine-1)-methyltransferase KYK33_17330 PF05239 PRC-barrel domain KYK33_17330 PF01782 RimM N-terminal domain KYK33_17335 PF00886 Ribosomal protein S16 KYK33_17340 PF02978 Signal peptide binding domain KYK33_17340 PF00448 SRP54-type protein, GTPase domain KYK33_17340 PF02881 SRP54-type protein, helical bundle domain KYK33_17345 PF01578 Cytochrome C assembly protein KYK33_17350 PF00571 CBS domain KYK33_17350 PF03471 Transporter associated domain KYK33_17350 PF01595 Cyclin M transmembrane N-terminal domain KYK33_17355 PF02082 Transcriptional regulator KYK33_17360 PF00970 Oxidoreductase FAD-binding domain KYK33_17360 PF00042 Globin KYK33_17360 PF00175 Oxidoreductase NAD-binding domain KYK33_17365 PF08238 Sel1 repeat KYK33_17370 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KYK33_17370 PF00056 lactate/malate dehydrogenase, NAD binding domain KYK33_17375 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_17380 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_17385 PF00497 Bacterial extracellular solute-binding proteins, family 3 KYK33_17390 PF00005 ABC transporter KYK33_17395 PF02863 Arginine repressor, C-terminal domain KYK33_17395 PF01316 Arginine repressor, DNA binding domain KYK33_17400 PF04261 Dyp-type peroxidase family KYK33_17405 PF08402 TOBE domain KYK33_17405 PF00005 ABC transporter KYK33_17415 PF13416 Bacterial extracellular solute-binding protein KYK33_17420 PF00909 Ammonium Transporter Family KYK33_17425 PF00543 Nitrogen regulatory protein P-II KYK33_17430 PF00472 RF-1 domain KYK33_17435 PF07670 Nucleoside recognition KYK33_17435 PF07662 Na+ dependent nucleoside transporter C-terminus KYK33_17435 PF01773 Na+ dependent nucleoside transporter N-terminus KYK33_17440 PF03466 LysR substrate binding domain KYK33_17440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_17445 PF00255 Glutathione peroxidase KYK33_17455 PF02595 Glycerate kinase family KYK33_17460 PF02447 GntP family permease KYK33_17465 PF05651 Putative sugar diacid recognition KYK33_17465 PF17853 GGDEF-like domain KYK33_17465 PF13556 PucR C-terminal helix-turn-helix domain KYK33_17470 PF06062 Uncharacterised protein family (UPF0231) KYK33_17500 PF00270 DEAD/DEAH box helicase KYK33_17500 PF00271 Helicase conserved C-terminal domain KYK33_17505 PF08534 Redoxin KYK33_17510 PF00403 Heavy-metal-associated domain KYK33_17515 PF17967 Pullulanase N2 domain KYK33_17515 PF18494 Pullulanase Ins domain KYK33_17515 PF03714 Bacterial pullanase-associated domain KYK33_17515 PF11852 Domain of unknown function (DUF3372) KYK33_17515 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KYK33_17530 PF02583 Metal-sensitive transcriptional repressor KYK33_17535 PF00155 Aminotransferase class I and II KYK33_17550 PF01594 AI-2E family transporter KYK33_17555 PF02321 Outer membrane efflux protein KYK33_17560 PF13533 Biotin-lipoyl like KYK33_17595 PF14488 Domain of unknown function (DUF4434) KYK33_17600 PF13283 Bacteriophage N adsorption protein A C-term KYK33_17605 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KYK33_17605 PF13632 Glycosyl transferase family group 2 KYK33_17610 PF02350 UDP-N-acetylglucosamine 2-epimerase KYK33_17620 PF18416 N-acetylglucosamine binding protein domain 2 KYK33_17620 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KYK33_17625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_17625 PF03466 LysR substrate binding domain KYK33_17630 PF12857 TOBE-like domain KYK33_17630 PF00005 ABC transporter KYK33_17635 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_17640 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_17655 PF13194 Domain of unknown function (DUF4010) KYK33_17660 PF14602 Hexapeptide repeat of succinyl-transferase KYK33_17660 PF12464 Maltose acetyltransferase KYK33_17670 PF00367 phosphotransferase system, EIIB KYK33_17670 PF02378 Phosphotransferase system, EIIC KYK33_17675 PF01547 Bacterial extracellular solute-binding protein KYK33_17680 PF00672 HAMP domain KYK33_17680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_17680 PF00512 His Kinase A (phospho-acceptor) domain KYK33_17685 PF00072 Response regulator receiver domain KYK33_17685 PF00486 Transcriptional regulatory protein, C terminal KYK33_17705 PF00206 Lyase KYK33_17705 PF14698 Argininosuccinate lyase C-terminal KYK33_17710 PF00764 Arginosuccinate synthase KYK33_17715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KYK33_17715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KYK33_17720 PF00696 Amino acid kinase family KYK33_17725 PF02774 Semialdehyde dehydrogenase, dimerisation domain KYK33_17725 PF01118 Semialdehyde dehydrogenase, NAD binding domain KYK33_17730 PF07687 Peptidase dimerisation domain KYK33_17730 PF01546 Peptidase family M20/M25/M40 KYK33_17735 PF00311 Phosphoenolpyruvate carboxylase KYK33_17740 PF04073 Aminoacyl-tRNA editing domain KYK33_17760 PF00392 Bacterial regulatory proteins, gntR family KYK33_17760 PF00155 Aminotransferase class I and II KYK33_17765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_17765 PF03466 LysR substrate binding domain KYK33_17770 PF03788 LrgA family KYK33_17775 PF04172 LrgB-like family KYK33_17780 PF00696 Amino acid kinase family KYK33_17780 PF00742 Homoserine dehydrogenase KYK33_17780 PF03447 Homoserine dehydrogenase, NAD binding domain KYK33_17785 PF01053 Cys/Met metabolism PLP-dependent enzyme KYK33_17790 PF01340 Met Apo-repressor, MetJ KYK33_17810 PF00459 Inositol monophosphatase family KYK33_17815 PF00293 NUDIX domain KYK33_17820 PF13419 Haloacid dehalogenase-like hydrolase KYK33_17825 PF01479 S4 domain KYK33_17825 PF00579 tRNA synthetases class I (W and Y) KYK33_17830 PF00196 Bacterial regulatory proteins, luxR family KYK33_17835 PF01203 Type II secretion system (T2SS), protein N KYK33_17840 PF04612 Type II secretion system (T2SS), protein M KYK33_17845 PF12693 GspL periplasmic domain KYK33_17845 PF05134 Type II secretion system (T2SS), protein L KYK33_17850 PF03934 Type II secretion system (T2SS), protein K KYK33_17855 PF07963 Prokaryotic N-terminal methylation motif KYK33_17855 PF11612 Type II secretion system (T2SS), protein J KYK33_17860 PF02501 Type II secretion system (T2SS), protein I KYK33_17860 PF07963 Prokaryotic N-terminal methylation motif KYK33_17865 PF07963 Prokaryotic N-terminal methylation motif KYK33_17865 PF12019 Type II transport protein GspH KYK33_17870 PF07963 Prokaryotic N-terminal methylation motif KYK33_17870 PF08334 Type II secretion system (T2SS), protein G KYK33_17875 PF00482 Type II secretion system (T2SS), protein F KYK33_17880 PF00437 Type II/IV secretion system protein KYK33_17885 PF00263 Bacterial type II and III secretion system protein KYK33_17885 PF03958 Bacterial type II/III secretion system short domain KYK33_17890 PF11356 Type II secretion system protein C KYK33_17895 PF01479 S4 domain KYK33_17900 PF01430 Hsp33 protein KYK33_17905 PF01293 Phosphoenolpyruvate carboxykinase KYK33_17910 PF00392 Bacterial regulatory proteins, gntR family KYK33_17915 PF00557 Metallopeptidase family M24 KYK33_17915 PF01321 Creatinase/Prolidase N-terminal domain KYK33_17920 PF00583 Acetyltransferase (GNAT) family KYK33_17925 PF05433 Glycine zipper 2TM domain KYK33_17930 PF00149 Calcineurin-like phosphoesterase KYK33_17930 PF02872 5'-nucleotidase, C-terminal domain KYK33_17935 PF01810 LysE type translocator KYK33_17940 PF00196 Bacterial regulatory proteins, luxR family KYK33_17940 PF03472 Autoinducer binding domain KYK33_17945 PF00765 Autoinducer synthase KYK33_17950 PF03466 LysR substrate binding domain KYK33_17950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_17955 PF00773 RNB domain KYK33_17955 PF17876 Cold shock domain KYK33_17955 PF08206 Ribonuclease B OB domain KYK33_17960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KYK33_17960 PF02378 Phosphotransferase system, EIIC KYK33_17960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KYK33_17965 PF08125 Mannitol dehydrogenase C-terminal domain KYK33_17965 PF01232 Mannitol dehydrogenase Rossmann domain KYK33_17970 PF05068 Mannitol repressor KYK33_17990 PF01544 CorA-like Mg2+ transporter protein KYK33_17995 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KYK33_18000 PF04307 LexA-binding, inner membrane-associated putative hydrolase KYK33_18005 PF11999 Protein of unknown function (DUF3494) KYK33_18005 PF02368 Bacterial Ig-like domain (group 2) KYK33_18010 PF00270 DEAD/DEAH box helicase KYK33_18010 PF03880 DbpA RNA binding domain KYK33_18010 PF00271 Helicase conserved C-terminal domain KYK33_18025 PF00884 Sulfatase KYK33_18030 PF01037 Lrp/AsnC ligand binding domain KYK33_18050 PF04228 Putative neutral zinc metallopeptidase KYK33_18060 PF07690 Major Facilitator Superfamily KYK33_18065 PF01914 MarC family integral membrane protein KYK33_18070 PF01523 Putative modulator of DNA gyrase KYK33_18075 PF00795 Carbon-nitrogen hydrolase KYK33_18080 PF13502 AsmA-like C-terminal region KYK33_18080 PF13116 Protein of unknown function KYK33_18085 PF00575 S1 RNA binding domain KYK33_18085 PF10150 Ribonuclease E/G family KYK33_18090 PF02545 Maf-like protein KYK33_18095 PF04093 rod shape-determining protein MreD KYK33_18100 PF04085 rod shape-determining protein MreC KYK33_18130 PF07963 Prokaryotic N-terminal methylation motif KYK33_18130 PF00114 Pilin (bacterial filament) KYK33_18135 PF07963 Prokaryotic N-terminal methylation motif KYK33_18140 PF07963 Prokaryotic N-terminal methylation motif KYK33_18150 PF00482 Type II secretion system (T2SS), protein F KYK33_18155 PF00437 Type II/IV secretion system protein KYK33_18155 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KYK33_18170 PF03958 Bacterial type II/III secretion system short domain KYK33_18170 PF00263 Bacterial type II and III secretion system protein KYK33_18200 PF03707 Bacterial signalling protein N terminal repeat KYK33_18200 PF00990 Diguanylate cyclase, GGDEF domain KYK33_18200 PF00563 EAL domain KYK33_18205 PF12792 CSS motif domain associated with EAL KYK33_18205 PF00563 EAL domain KYK33_18210 PF00990 Diguanylate cyclase, GGDEF domain KYK33_18225 PF13538 UvrD-like helicase C-terminal domain KYK33_18230 PF13361 UvrD-like helicase C-terminal domain KYK33_18230 PF00580 UvrD/REP helicase N-terminal domain KYK33_18230 PF12705 PD-(D/E)XK nuclease superfamily KYK33_18235 PF17946 RecC C-terminal domain KYK33_18245 PF07681 DoxX KYK33_18250 PF02678 Pirin KYK33_18250 PF17954 Quercetinase C-terminal cupin domain KYK33_18260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_18260 PF03466 LysR substrate binding domain KYK33_18270 PF07702 UTRA domain KYK33_18270 PF00392 Bacterial regulatory proteins, gntR family KYK33_18285 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_18295 PF08402 TOBE domain KYK33_18295 PF00005 ABC transporter KYK33_18305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_18305 PF00672 HAMP domain KYK33_18305 PF02743 Cache domain KYK33_18325 PF12833 Helix-turn-helix domain KYK33_18325 PF06719 AraC-type transcriptional regulator N-terminus KYK33_18330 PF00583 Acetyltransferase (GNAT) family KYK33_18335 PF00199 Catalase KYK33_18335 PF06628 Catalase-related immune-responsive KYK33_18360 PF00293 NUDIX domain KYK33_18365 PF01594 AI-2E family transporter KYK33_18380 PF04371 Porphyromonas-type peptidyl-arginine deiminase KYK33_18385 PF13416 Bacterial extracellular solute-binding protein KYK33_18390 PF04371 Porphyromonas-type peptidyl-arginine deiminase KYK33_18395 PF03466 LysR substrate binding domain KYK33_18395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_18400 PF00989 PAS fold KYK33_18400 PF02954 Bacterial regulatory protein, Fis family KYK33_18400 PF00158 Sigma-54 interaction domain KYK33_18405 PF05524 PEP-utilising enzyme, N-terminal KYK33_18405 PF00391 PEP-utilising enzyme, mobile domain KYK33_18405 PF00381 PTS HPr component phosphorylation site KYK33_18405 PF03610 PTS system fructose IIA component KYK33_18410 PF02734 DAK2 domain KYK33_18415 PF02733 Dak1 domain KYK33_18420 PF00860 Permease family KYK33_18425 PF03079 ARD/ARD' family KYK33_18460 PF01196 Ribosomal protein L17 KYK33_18465 PF01000 RNA polymerase Rpb3/RpoA insert domain KYK33_18465 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KYK33_18465 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KYK33_18470 PF01479 S4 domain KYK33_18470 PF00163 Ribosomal protein S4/S9 N-terminal domain KYK33_18475 PF00411 Ribosomal protein S11 KYK33_18480 PF00416 Ribosomal protein S13/S18 KYK33_18485 PF00444 Ribosomal protein L36 KYK33_18490 PF00344 SecY translocase KYK33_18495 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KYK33_18500 PF00327 Ribosomal protein L30p/L7e KYK33_18505 PF00333 Ribosomal protein S5, N-terminal domain KYK33_18505 PF03719 Ribosomal protein S5, C-terminal domain KYK33_18510 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KYK33_18515 PF00347 Ribosomal protein L6 KYK33_18520 PF00410 Ribosomal protein S8 KYK33_18525 PF00253 Ribosomal protein S14p/S29e KYK33_18530 PF00673 ribosomal L5P family C-terminus KYK33_18530 PF00281 Ribosomal protein L5 KYK33_18535 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KYK33_18535 PF00467 KOW motif KYK33_18540 PF00238 Ribosomal protein L14p/L23e KYK33_18545 PF00366 Ribosomal protein S17 KYK33_18550 PF00831 Ribosomal L29 protein KYK33_18555 PF00252 Ribosomal protein L16p/L10e KYK33_18560 PF07650 KH domain KYK33_18560 PF00189 Ribosomal protein S3, C-terminal domain KYK33_18565 PF00237 Ribosomal protein L22p/L17e KYK33_18570 PF00203 Ribosomal protein S19 KYK33_18575 PF03947 Ribosomal Proteins L2, C-terminal domain KYK33_18575 PF00181 Ribosomal Proteins L2, RNA binding domain KYK33_18580 PF00276 Ribosomal protein L23 KYK33_18585 PF00573 Ribosomal protein L4/L1 family KYK33_18590 PF00297 Ribosomal protein L3 KYK33_18595 PF00338 Ribosomal protein S10p/S20e KYK33_18605 PF00512 His Kinase A (phospho-acceptor) domain KYK33_18605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_18605 PF00672 HAMP domain KYK33_18610 PF00486 Transcriptional regulatory protein, C terminal KYK33_18610 PF00072 Response regulator receiver domain KYK33_18615 PF01272 Transcription elongation factor, GreA/GreB, C-term KYK33_18615 PF03449 Transcription elongation factor, N-terminal KYK33_18620 PF16921 Tex protein YqgF-like domain KYK33_18620 PF09371 Tex-like protein N-terminal domain KYK33_18620 PF00575 S1 RNA binding domain KYK33_18620 PF17674 HHH domain KYK33_18635 PF00561 alpha/beta hydrolase fold KYK33_18640 PF00156 Phosphoribosyl transferase domain KYK33_18645 PF01521 Iron-sulphur cluster biosynthesis KYK33_18645 PF01106 NifU-like domain KYK33_18650 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KYK33_18650 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KYK33_18655 PF02556 Preprotein translocase subunit SecB KYK33_18660 PF00581 Rhodanese-like domain KYK33_18665 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KYK33_18665 PF01676 Metalloenzyme superfamily KYK33_18670 PF01551 Peptidase family M23 KYK33_18675 PF13599 Pentapeptide repeats (9 copies) KYK33_18685 PF01081 KDPG and KHG aldolase KYK33_18700 PF13091 PLD-like domain KYK33_18705 PF00271 Helicase conserved C-terminal domain KYK33_18705 PF00270 DEAD/DEAH box helicase KYK33_18705 PF17191 RecG wedge domain KYK33_18715 PF00583 Acetyltransferase (GNAT) family KYK33_18715 PF09500 Putative thioesterase (yiiD_Cterm) KYK33_18725 PF02580 D-Tyr-tRNA(Tyr) deacylase KYK33_18730 PF03631 Virulence factor BrkB KYK33_18735 PF00679 Elongation factor G C-terminus KYK33_18735 PF00009 Elongation factor Tu GTP binding domain KYK33_18735 PF03144 Elongation factor Tu domain 2 KYK33_18740 PF00120 Glutamine synthetase, catalytic domain KYK33_18740 PF03951 Glutamine synthetase, beta-Grasp domain KYK33_18750 PF00512 His Kinase A (phospho-acceptor) domain KYK33_18750 PF00989 PAS fold KYK33_18750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_18755 PF02954 Bacterial regulatory protein, Fis family KYK33_18755 PF00072 Response regulator receiver domain KYK33_18755 PF00158 Sigma-54 interaction domain KYK33_18760 PF02954 Bacterial regulatory protein, Fis family KYK33_18760 PF00072 Response regulator receiver domain KYK33_18760 PF00158 Sigma-54 interaction domain KYK33_18765 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KYK33_18770 PF00034 Cytochrome c KYK33_18775 PF10431 C-terminal, D2-small domain, of ClpB protein KYK33_18775 PF02861 Clp amino terminal domain, pathogenicity island component KYK33_18775 PF17871 AAA lid domain KYK33_18775 PF00004 ATPase family associated with various cellular activities (AAA) KYK33_18775 PF07724 AAA domain (Cdc48 subfamily) KYK33_18780 PF02578 Multi-copper polyphenol oxidoreductase laccase KYK33_18785 PF00849 RNA pseudouridylate synthase KYK33_18785 PF01479 S4 domain KYK33_18790 PF13525 Outer membrane lipoprotein KYK33_18795 PF03313 Serine dehydratase alpha chain KYK33_18800 PF02233 NAD(P) transhydrogenase beta subunit KYK33_18805 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KYK33_18805 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KYK33_18805 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KYK33_18810 PF00465 Iron-containing alcohol dehydrogenase KYK33_18815 PF12833 Helix-turn-helix domain KYK33_18815 PF06719 AraC-type transcriptional regulator N-terminus KYK33_18820 PF08212 Lipocalin-like domain KYK33_18825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_18825 PF00672 HAMP domain KYK33_18825 PF02743 Cache domain KYK33_18840 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KYK33_18840 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KYK33_18845 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain KYK33_18845 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain KYK33_18850 PF01316 Arginine repressor, DNA binding domain KYK33_18850 PF02863 Arginine repressor, C-terminal domain KYK33_18855 PF03606 C4-dicarboxylate anaerobic carrier KYK33_18860 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KYK33_18860 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KYK33_18865 PF00696 Amino acid kinase family KYK33_18885 PF00672 HAMP domain KYK33_18885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KYK33_18885 PF02743 Cache domain KYK33_18890 PF02653 Branched-chain amino acid transport system / permease component KYK33_18895 PF00005 ABC transporter KYK33_18900 PF13407 Periplasmic binding protein domain KYK33_18905 PF02929 Beta galactosidase small chain KYK33_18905 PF00703 Glycosyl hydrolases family 2 KYK33_18905 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KYK33_18905 PF02837 Glycosyl hydrolases family 2, sugar binding domain KYK33_18905 PF16353 Domain of unknown function(DUF4981) KYK33_18910 PF00356 Bacterial regulatory proteins, lacI family KYK33_18915 PF16363 GDP-mannose 4,6 dehydratase KYK33_18920 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KYK33_18920 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KYK33_18925 PF10509 Galactokinase galactose-binding signature KYK33_18925 PF00288 GHMP kinases N terminal domain KYK33_18925 PF08544 GHMP kinases C terminal KYK33_18930 PF01263 Aldose 1-epimerase KYK33_18935 PF00248 Aldo/keto reductase family KYK33_18940 PF02673 Bacitracin resistance protein BacA KYK33_18950 PF04542 Sigma-70 region 2 KYK33_18950 PF04545 Sigma-70, region 4 KYK33_18960 PF00750 tRNA synthetases class I (R) KYK33_18960 PF05746 DALR anticodon binding domain KYK33_18960 PF03485 Arginyl tRNA synthetase N terminal domain KYK33_18970 PF00227 Proteasome subunit KYK33_18975 PF07724 AAA domain (Cdc48 subfamily) KYK33_18975 PF10431 C-terminal, D2-small domain, of ClpB protein KYK33_18975 PF00004 ATPase family associated with various cellular activities (AAA) KYK33_18980 PF07690 Major Facilitator Superfamily KYK33_18985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KYK33_18985 PF03466 LysR substrate binding domain KYK33_18990 PF04324 BFD-like [2Fe-2S] binding domain KYK33_18990 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KYK33_18990 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KYK33_18990 PF18267 Rubredoxin NAD+ reductase C-terminal domain KYK33_18990 PF07992 Pyridine nucleotide-disulphide oxidoreductase KYK33_18995 PF13806 Rieske-like [2Fe-2S] domain KYK33_19000 PF01226 Formate/nitrite transporter KYK33_19005 PF10414 Sirohaem synthase dimerisation region KYK33_19005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KYK33_19005 PF14824 Sirohaem biosynthesis protein central KYK33_19010 PF03737 Aldolase/RraA KYK33_19020 PF02592 Putative vitamin uptake transporter KYK33_19030 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KYK33_19035 PF00034 Cytochrome c KYK33_19040 PF00270 DEAD/DEAH box helicase KYK33_19040 PF00271 Helicase conserved C-terminal domain KYK33_19040 PF00570 HRDC domain KYK33_19040 PF16124 RecQ zinc-binding KYK33_19040 PF09382 RQC domain KYK33_19045 PF03061 Thioesterase superfamily KYK33_19060 PF03475 3-alpha domain KYK33_19060 PF03473 MOSC domain KYK33_19065 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_19070 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_19075 PF00005 ABC transporter KYK33_19075 PF08402 TOBE domain KYK33_19080 PF13416 Bacterial extracellular solute-binding protein KYK33_19085 PF13416 Bacterial extracellular solute-binding protein KYK33_19090 PF00202 Aminotransferase class-III KYK33_19095 PF00120 Glutamine synthetase, catalytic domain KYK33_19100 PF01258 Prokaryotic dksA/traR C4-type zinc finger KYK33_19110 PF05981 CreA protein KYK33_19115 PF00106 short chain dehydrogenase KYK33_19120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KYK33_19120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KYK33_19125 PF00012 Hsp70 protein KYK33_19140 PF02903 Alpha amylase, N-terminal ig-like domain KYK33_19140 PF00128 Alpha amylase, catalytic domain KYK33_19155 PF05958 tRNA (Uracil-5-)-methyltransferase KYK33_19160 PF00072 Response regulator receiver domain KYK33_19160 PF00486 Transcriptional regulatory protein, C terminal KYK33_19165 PF00512 His Kinase A (phospho-acceptor) domain KYK33_19165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_19165 PF00672 HAMP domain KYK33_19175 PF03949 Malic enzyme, NAD binding domain KYK33_19175 PF00390 Malic enzyme, N-terminal domain KYK33_19180 PF13460 NAD(P)H-binding KYK33_19180 PF11066 Protein of unknown function (DUF2867) KYK33_19185 PF01197 Ribosomal protein L31 KYK33_19190 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KYK33_19190 PF18074 Primosomal protein N C-terminal domain KYK33_19190 PF17764 3′ DNA-binding domain (3′BD) KYK33_19190 PF00270 DEAD/DEAH box helicase KYK33_19190 PF00271 Helicase conserved C-terminal domain KYK33_19200 PF13593 SBF-like CPA transporter family (DUF4137) KYK33_19235 PF00132 Bacterial transferase hexapeptide (six repeats) KYK33_19240 PF01612 3'-5' exonuclease KYK33_19240 PF00476 DNA polymerase family A KYK33_19240 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KYK33_19240 PF01367 5'-3' exonuclease, C-terminal SAM fold KYK33_19250 PF06005 Cell division protein ZapB KYK33_19260 PF06426 Serine acetyltransferase, N-terminal KYK33_19260 PF00132 Bacterial transferase hexapeptide (six repeats) KYK33_19265 PF16916 Dimerisation domain of Zinc Transporter KYK33_19265 PF01545 Cation efflux family KYK33_19270 PF00486 Transcriptional regulatory protein, C terminal KYK33_19270 PF00072 Response regulator receiver domain KYK33_19275 PF00672 HAMP domain KYK33_19275 PF16527 Two-component sensor protein CpxA, periplasmic domain KYK33_19275 PF00512 His Kinase A (phospho-acceptor) domain KYK33_19275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_19280 PF00588 SpoU rRNA Methylase family KYK33_19285 PF01554 MatE KYK33_19290 PF02630 SCO1/SenC KYK33_19295 PF01040 UbiA prenyltransferase family KYK33_19300 PF02628 Cytochrome oxidase assembly protein KYK33_19320 PF00510 Cytochrome c oxidase subunit III KYK33_19330 PF00115 Cytochrome C and Quinol oxidase polypeptide I KYK33_19335 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KYK33_19335 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KYK33_19340 PF01726 LexA DNA binding domain KYK33_19340 PF00717 Peptidase S24-like KYK33_19345 PF01553 Acyltransferase KYK33_19350 PF01040 UbiA prenyltransferase family KYK33_19355 PF04345 Chorismate lyase KYK33_19360 PF03748 Flagellar basal body-associated protein FliL KYK33_19375 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KYK33_19380 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KYK33_19390 PF00534 Glycosyl transferases group 1 KYK33_19390 PF13439 Glycosyltransferase Family 4 KYK33_19400 PF00534 Glycosyl transferases group 1 KYK33_19400 PF13439 Glycosyltransferase Family 4 KYK33_19405 PF00535 Glycosyl transferase family 2 KYK33_19410 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KYK33_19415 PF01467 Cytidylyltransferase-like KYK33_19420 PF04393 Protein of unknown function (DUF535) KYK33_19425 PF06827 Zinc finger found in FPG and IleRS KYK33_19425 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KYK33_19425 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KYK33_19435 PF00471 Ribosomal protein L33 KYK33_19440 PF00830 Ribosomal L28 family KYK33_19445 PF04002 RadC-like JAB domain KYK33_19450 PF02441 Flavoprotein KYK33_19450 PF04127 DNA / pantothenate metabolism flavoprotein KYK33_19455 PF00692 dUTPase KYK33_19460 PF00440 Bacterial regulatory proteins, tetR family KYK33_19465 PF00924 Mechanosensitive ion channel KYK33_19465 PF05552 Conserved TM helix KYK33_19470 PF00156 Phosphoribosyl transferase domain KYK33_19475 PF01138 3' exoribonuclease family, domain 1 KYK33_19475 PF03725 3' exoribonuclease family, domain 2 KYK33_19480 PF08340 Domain of unknown function (DUF1732) KYK33_19480 PF03755 YicC-like family, N-terminal region KYK33_19510 PF07510 Protein of unknown function (DUF1524) KYK33_19520 PF01420 Type I restriction modification DNA specificity domain KYK33_19525 PF12161 HsdM N-terminal domain KYK33_19525 PF02384 N-6 DNA Methylase KYK33_19530 PF04851 Type III restriction enzyme, res subunit KYK33_19530 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) KYK33_19530 PF00271 Helicase conserved C-terminal domain KYK33_19530 PF08463 EcoEI R protein C-terminal KYK33_19545 PF07804 HipA-like C-terminal domain KYK33_19545 PF13657 HipA N-terminal domain KYK33_19550 PF05638 Type VI secretion system effector, Hcp KYK33_19560 PF04717 Type VI secretion system, phage-baseplate injector KYK33_19610 PF00534 Glycosyl transferases group 1 KYK33_19610 PF13439 Glycosyltransferase Family 4 KYK33_19615 PF01370 NAD dependent epimerase/dehydratase family KYK33_19620 PF00440 Bacterial regulatory proteins, tetR family KYK33_19620 PF08360 QacR-like protein, C-terminal region KYK33_19625 PF00155 Aminotransferase class I and II KYK33_19630 PF08240 Alcohol dehydrogenase GroES-like domain KYK33_19630 PF00107 Zinc-binding dehydrogenase KYK33_19635 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KYK33_19640 PF00563 EAL domain KYK33_19640 PF13188 PAS domain KYK33_19640 PF03707 Bacterial signalling protein N terminal repeat KYK33_19640 PF00990 Diguanylate cyclase, GGDEF domain KYK33_19645 PF00580 UvrD/REP helicase N-terminal domain KYK33_19645 PF13361 UvrD-like helicase C-terminal domain KYK33_19650 PF00266 Aminotransferase class-V KYK33_19655 PF02657 Fe-S metabolism associated domain KYK33_19660 PF00899 ThiF family KYK33_19665 PF00005 ABC transporter KYK33_19700 PF12724 Flavodoxin domain KYK33_19705 PF02386 Cation transport protein KYK33_19710 PF01205 Uncharacterized protein family UPF0029 KYK33_19710 PF09186 Domain of unknown function (DUF1949) KYK33_19715 PF00557 Metallopeptidase family M24 KYK33_19720 PF13193 AMP-binding enzyme C-terminal domain KYK33_19720 PF00501 AMP-binding enzyme KYK33_19725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KYK33_19725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KYK33_19725 PF00378 Enoyl-CoA hydratase/isomerase KYK33_19730 PF02803 Thiolase, C-terminal domain KYK33_19730 PF00108 Thiolase, N-terminal domain KYK33_19735 PF00486 Transcriptional regulatory protein, C terminal KYK33_19735 PF00072 Response regulator receiver domain KYK33_19740 PF00672 HAMP domain KYK33_19740 PF00512 His Kinase A (phospho-acceptor) domain KYK33_19740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_19745 PF01547 Bacterial extracellular solute-binding protein KYK33_19755 PF01206 Sulfurtransferase TusA KYK33_19760 PF01042 Endoribonuclease L-PSP KYK33_19765 PF00691 OmpA family KYK33_19765 PF13488 Glycine zipper KYK33_19780 PF03352 Methyladenine glycosylase KYK33_19785 PF02091 Glycyl-tRNA synthetase alpha subunit KYK33_19790 PF05746 DALR anticodon binding domain KYK33_19790 PF02092 Glycyl-tRNA synthetase beta subunit KYK33_19805 PF03222 Tryptophan/tyrosine permease family KYK33_19810 PF12801 4Fe-4S binding domain KYK33_19820 PF07992 Pyridine nucleotide-disulphide oxidoreductase KYK33_19820 PF18113 Rubredoxin binding C-terminal domain KYK33_19825 PF00258 Flavodoxin KYK33_19825 PF00301 Rubredoxin KYK33_19825 PF00753 Metallo-beta-lactamase superfamily KYK33_19830 PF00158 Sigma-54 interaction domain KYK33_19830 PF01590 GAF domain KYK33_19835 PF00490 Delta-aminolevulinic acid dehydratase KYK33_19840 PF01026 TatD related DNase KYK33_19845 PF00902 Sec-independent protein translocase protein (TatC) KYK33_19850 PF02416 mttA/Hcf106 family KYK33_19855 PF02416 mttA/Hcf106 family KYK33_19860 PF03109 ABC1 family KYK33_19865 PF02036 SCP-2 sterol transfer family KYK33_19870 PF01209 ubiE/COQ5 methyltransferase family KYK33_19875 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KYK33_19880 PF07969 Amidohydrolase family KYK33_19920 PF03544 Gram-negative bacterial TonB protein C-terminal KYK33_19925 PF02472 Biopolymer transport protein ExbD/TolR KYK33_19930 PF01618 MotA/TolQ/ExbB proton channel family KYK33_19935 PF01618 MotA/TolQ/ExbB proton channel family KYK33_19945 PF03472 Autoinducer binding domain KYK33_19945 PF00196 Bacterial regulatory proteins, luxR family KYK33_19950 PF01380 SIS domain KYK33_19955 PF00455 DeoR C terminal sensor domain KYK33_19955 PF08220 DeoR-like helix-turn-helix domain KYK33_19960 PF00072 Response regulator receiver domain KYK33_19960 PF00486 Transcriptional regulatory protein, C terminal KYK33_19965 PF00672 HAMP domain KYK33_19965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KYK33_19965 PF00512 His Kinase A (phospho-acceptor) domain KYK33_19970 PF06123 Inner membrane protein CreD KYK33_19975 PF12804 MobA-like NTP transferase domain KYK33_19975 PF14602 Hexapeptide repeat of succinyl-transferase KYK33_19975 PF00132 Bacterial transferase hexapeptide (six repeats) KYK33_19980 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KYK33_19980 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KYK33_19985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KYK33_19985 PF02874 ATP synthase alpha/beta family, beta-barrel domain KYK33_19990 PF00231 ATP synthase KYK33_19995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KYK33_19995 PF00306 ATP synthase alpha/beta chain, C terminal domain KYK33_19995 PF02874 ATP synthase alpha/beta family, beta-barrel domain KYK33_20000 PF00213 ATP synthase delta (OSCP) subunit KYK33_20005 PF00430 ATP synthase B/B' CF(0) KYK33_20010 PF00137 ATP synthase subunit C KYK33_20015 PF00119 ATP synthase A chain KYK33_20025 PF17762 HTH domain found in ParB protein KYK33_20025 PF02195 ParB-like nuclease domain KYK33_20030 PF13614 AAA domain KYK33_20035 PF02527 rRNA small subunit methyltransferase G KYK33_20040 PF01134 Glucose inhibited division protein A KYK33_20040 PF13932 GidA associated domain KYK33_20045 PF00258 Flavodoxin KYK33_20050 PF07715 TonB-dependent Receptor Plug Domain KYK33_20050 PF00593 TonB dependent receptor KYK33_20055 PF00005 ABC transporter KYK33_20060 PF00005 ABC transporter KYK33_20065 PF01497 Periplasmic binding protein KYK33_20070 PF01032 FecCD transport family KYK33_20075 PF01926 50S ribosome-binding GTPase KYK33_20075 PF12631 MnmE helical domain KYK33_20075 PF10396 GTP-binding protein TrmE N-terminus KYK33_20080 PF02096 60Kd inner membrane protein KYK33_20080 PF14849 YidC periplasmic domain KYK33_20085 PF01809 Putative membrane protein insertion efficiency factor KYK33_20090 PF00825 Ribonuclease P KYK33_20095 PF00468 Ribosomal protein L34 KYK33_20100 PF00005 ABC transporter KYK33_20105 PF00528 Binding-protein-dependent transport system inner membrane component KYK33_20110 PF00497 Bacterial extracellular solute-binding proteins, family 3