CHQ57_00005 SM00382 ATPases associated with a variety of cellular activities CHQ57_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain CHQ57_00010 SM00480 DNA polymerase III beta subunit CHQ57_00020 SM00387 Histidine kinase-like ATPases CHQ57_00020 SM00433 TopoisomeraseII CHQ57_00060 SM00342 helix_turn_helix, arabinose operon control protein CHQ57_00070 SM00448 cheY-homologous receiver domain CHQ57_00070 SM00862 Transcriptional regulatory protein, C terminal CHQ57_00075 SM00387 Histidine kinase-like ATPases CHQ57_00075 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_00105 SM00091 PAS domain CHQ57_00105 SM00387 Histidine kinase-like ATPases CHQ57_00155 SM00458 Ricin-type beta-trefoil CHQ57_00175 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CHQ57_00175 SM00954 Region found in RelA / SpoT proteins CHQ57_00180 SM01409 CHQ57_00180 CHQ57_00185 SM00072 Guanylate kinase homologues. CHQ57_00205 SM00267 diguanylate cyclase CHQ57_00250 SM00028 Tetratricopeptide repeats CHQ57_00250 SM00267 diguanylate cyclase CHQ57_00305 SM00421 helix_turn_helix, Lux Regulon CHQ57_00305 SM00448 cheY-homologous receiver domain CHQ57_00310 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_00310 SM00091 PAS domain CHQ57_00310 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_00320 SM00387 Histidine kinase-like ATPases CHQ57_00320 SM00448 cheY-homologous receiver domain CHQ57_00330 SM00387 Histidine kinase-like ATPases CHQ57_00335 SM00448 cheY-homologous receiver domain CHQ57_00335 SM00850 LytTr DNA-binding domain CHQ57_00350 SM01001 AIR carboxylase CHQ57_00380 SM00360 RNA recognition motif CHQ57_00405 SM00881 CoA binding domain CHQ57_00480 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CHQ57_00480 SM01232 CHQ57_00480 CHQ57_00530 SM00354 helix_turn _helix lactose operon repressor CHQ57_00535 SM00829 Enoylreductase CHQ57_00570 SM00563 Phosphate acyltransferases CHQ57_00600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_00600 SM00387 Histidine kinase-like ATPases CHQ57_00600 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_00605 SM00448 cheY-homologous receiver domain CHQ57_00605 SM00862 Transcriptional regulatory protein, C terminal CHQ57_00615 SM00971 Serine acetyltransferase, N-terminal CHQ57_00640 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CHQ57_00640 SM00474 3'-5' exonuclease CHQ57_00640 SM00475 5'-3' exonuclease CHQ57_00640 SM00482 DNA polymerase A domain CHQ57_00680 SM00354 helix_turn _helix lactose operon repressor CHQ57_00705 SM00829 Enoylreductase CHQ57_00725 SM00382 ATPases associated with a variety of cellular activities CHQ57_00760 SM01321 CHQ57_00760 CHQ57_00790 SM00749 bacterial OsmY and nodulation domain CHQ57_00820 SM00831 Cation transporter/ATPase, N-terminus CHQ57_00830 SM00342 helix_turn_helix, arabinose operon control protein CHQ57_00850 SM00530 Helix-turn-helix XRE-family like proteins CHQ57_00870 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CHQ57_00870 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CHQ57_00925 SM00257 Lysin motif CHQ57_00945 SM01001 AIR carboxylase CHQ57_00990 SM00729 Elongator protein 3, MiaB family, Radical SAM CHQ57_01000 SM00382 ATPases associated with a variety of cellular activities CHQ57_01000 SM00448 cheY-homologous receiver domain CHQ57_01005 SM00091 PAS domain CHQ57_01005 SM00387 Histidine kinase-like ATPases CHQ57_01005 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_01015 SM01230 CHQ57_01015 CHQ57_01050 SM00487 DEAD-like helicases superfamily CHQ57_01050 SM00490 helicase superfamily c-terminal domain CHQ57_01055 SM00155 Phospholipase D. Active site motifs. CHQ57_01080 SM00342 helix_turn_helix, arabinose operon control protein CHQ57_01090 SM00354 helix_turn _helix lactose operon repressor CHQ57_01110 SM00450 Rhodanese Homology Domain CHQ57_01160 SM00316 Ribosomal protein S1-like RNA-binding domain CHQ57_01160 SM00732 Likely ribonuclease with RNase H fold. CHQ57_01170 SM00448 cheY-homologous receiver domain CHQ57_01170 SM00862 Transcriptional regulatory protein, C terminal CHQ57_01175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_01175 SM00387 Histidine kinase-like ATPases CHQ57_01175 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_01185 SM01403 CHQ57_01185 CHQ57_01205 SM01382 CHQ57_01205 CHQ57_01205 SM01383 CHQ57_01205 CHQ57_01220 SM00322 K homology RNA-binding domain CHQ57_01240 SM01374 CHQ57_01240 CHQ57_01310 SM00363 S4 RNA-binding domain CHQ57_01310 SM01390 CHQ57_01310 CHQ57_01315 SM00662 RNA polymerases D CHQ57_01375 SM00267 diguanylate cyclase CHQ57_01385 SM00382 ATPases associated with a variety of cellular activities CHQ57_01410 SM00345 helix_turn_helix gluconate operon transcriptional repressor CHQ57_01410 SM00866 CHQ57_01410 CHQ57_01415 SM00530 Helix-turn-helix XRE-family like proteins CHQ57_01475 SM00342 helix_turn_helix, arabinose operon control protein CHQ57_01490 SM00938 Nitrogen regulatory protein P-II CHQ57_01495 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CHQ57_01495 SM00091 PAS domain CHQ57_01495 SM00267 diguanylate cyclase CHQ57_01505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_01505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_01525 SM00448 cheY-homologous receiver domain CHQ57_01525 SM00862 Transcriptional regulatory protein, C terminal CHQ57_01535 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_01535 SM00267 diguanylate cyclase CHQ57_01545 SM00357 Cold shock protein domain CHQ57_01565 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_01575 SM00421 helix_turn_helix, Lux Regulon CHQ57_01585 SM00267 diguanylate cyclase CHQ57_01605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_01640 SM00530 Helix-turn-helix XRE-family like proteins CHQ57_01690 SM01120 CHQ57_01690 CHQ57_01705 SM00091 PAS domain CHQ57_01720 SM00014 Acid phosphatase homologues CHQ57_01745 SM01060 CHQ57_01745 CHQ57_01755 SM00342 helix_turn_helix, arabinose operon control protein CHQ57_01755 SM00871 Bacterial transcription activator, effector binding domain CHQ57_01795 SM00382 ATPases associated with a variety of cellular activities CHQ57_01795 SM00962 SRP54-type protein, GTPase domain CHQ57_01795 SM00963 SRP54-type protein, helical bundle domain CHQ57_01800 SM00382 ATPases associated with a variety of cellular activities CHQ57_01815 SM00947 Carbonic anhydrase CHQ57_01820 SM00345 helix_turn_helix gluconate operon transcriptional repressor CHQ57_01820 SM00866 CHQ57_01820 CHQ57_01855 SM00052 Putative diguanylate phosphodiesterase CHQ57_01855 SM00267 diguanylate cyclase CHQ57_01885 SM00965 Secretin and TonB N terminus short domain CHQ57_01900 SM00382 ATPases associated with a variety of cellular activities CHQ57_01970 SM00316 Ribosomal protein S1-like RNA-binding domain CHQ57_01980 SM00886 Stress responsive A/B Barrel Domain CHQ57_02015 SM00448 cheY-homologous receiver domain CHQ57_02015 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CHQ57_02020 SM00387 Histidine kinase-like ATPases CHQ57_02020 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_02020 SM00448 cheY-homologous receiver domain CHQ57_02025 SM00331 Sigma factor PP2C-like phosphatases CHQ57_02025 SM00387 Histidine kinase-like ATPases CHQ57_02035 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CHQ57_02035 SM00091 PAS domain CHQ57_02070 SM01018 B12 binding domain CHQ57_02080 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_02085 SM00448 cheY-homologous receiver domain CHQ57_02085 SM00862 Transcriptional regulatory protein, C terminal CHQ57_02100 SM00999 Aerolysin toxin CHQ57_02130 SM00876 Biotin and Thiamin Synthesis associated domain CHQ57_02140 SM01321 CHQ57_02140 CHQ57_02275 SM01219 CHQ57_02275 CHQ57_02310 SM00100 Cyclic nucleotide-monophosphate binding domain CHQ57_02340 SM00382 ATPases associated with a variety of cellular activities CHQ57_02350 SM00852 Probable molybdopterin binding domain CHQ57_02370 SM00344 helix_turn_helix ASNC type CHQ57_02390 SM00642 Alpha-amylase domain CHQ57_02465 SM00387 Histidine kinase-like ATPases CHQ57_02465 SM00433 TopoisomeraseII CHQ57_02470 SM00434 DNA Topoisomerase IV CHQ57_02480 SM01321 CHQ57_02480 CHQ57_02510 SM00271 DnaJ molecular chaperone homology domain CHQ57_02540 SM00563 Phosphate acyltransferases CHQ57_02575 SM00986 Uracil DNA glycosylase superfamily CHQ57_02575 SM00987 UreE urease accessory protein, C-terminal domain CHQ57_02595 SM00382 ATPases associated with a variety of cellular activities CHQ57_02640 SM00347 helix_turn_helix multiple antibiotic resistance protein CHQ57_02655 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CHQ57_02655 SM00534 ATPase domain of DNA mismatch repair MUTS family CHQ57_02660 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CHQ57_02670 SM00382 ATPases associated with a variety of cellular activities CHQ57_02695 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CHQ57_02710 SM00859 Semialdehyde dehydrogenase, NAD binding domain CHQ57_02775 SM01266 CHQ57_02775 CHQ57_02805 SM00382 ATPases associated with a variety of cellular activities CHQ57_02830 SM00382 ATPases associated with a variety of cellular activities CHQ57_02835 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_02850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_02850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_02850 SM01049 CHQ57_02850 CHQ57_02890 SM00245 tail specific protease CHQ57_02970 SM00487 DEAD-like helicases superfamily CHQ57_02970 SM00490 helicase superfamily c-terminal domain CHQ57_02990 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CHQ57_02990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_03055 SM00938 Nitrogen regulatory protein P-II CHQ57_03075 SM00382 ATPases associated with a variety of cellular activities CHQ57_03090 SM00382 ATPases associated with a variety of cellular activities CHQ57_03095 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_03095 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CHQ57_03115 SM00671 Sel1-like repeats. CHQ57_03130 SM01091 Transporter associated domain CHQ57_03140 SM00382 ATPases associated with a variety of cellular activities CHQ57_03140 SM00962 SRP54-type protein, GTPase domain CHQ57_03140 SM00963 SRP54-type protein, helical bundle domain CHQ57_03170 SM00927 DNA mismatch repair enzyme MutH CHQ57_03210 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CHQ57_03225 SM00904 Riboflavin kinase CHQ57_03260 SM00342 helix_turn_helix, arabinose operon control protein CHQ57_03305 SM00938 Nitrogen regulatory protein P-II CHQ57_03320 SM00267 diguanylate cyclase CHQ57_03325 SM00316 Ribosomal protein S1-like RNA-binding domain CHQ57_03325 SM00357 Cold shock protein domain CHQ57_03325 SM00955 CHQ57_03325 CHQ57_03330 SM00967 RNA 2'-O ribose methyltransferase substrate binding CHQ57_03405 SM00829 Enoylreductase CHQ57_03450 SM00382 ATPases associated with a variety of cellular activities CHQ57_03455 SM00327 von Willebrand factor (vWF) type A domain CHQ57_03465 SM00344 helix_turn_helix ASNC type CHQ57_03470 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CHQ57_03470 SM00267 diguanylate cyclase CHQ57_03475 SM00267 diguanylate cyclase CHQ57_03495 SM00347 helix_turn_helix multiple antibiotic resistance protein CHQ57_03515 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_03515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_03520 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CHQ57_03525 SM00382 ATPases associated with a variety of cellular activities CHQ57_03660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_03660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_03675 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CHQ57_03685 SM00642 Alpha-amylase domain CHQ57_03690 SM00642 Alpha-amylase domain CHQ57_03700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_03700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_03710 SM00287 Bacterial SH3 domain homologues CHQ57_03755 SM00382 ATPases associated with a variety of cellular activities CHQ57_03810 SM00487 DEAD-like helicases superfamily CHQ57_03810 SM00490 helicase superfamily c-terminal domain CHQ57_03810 SM00847 Helicase associated domain (HA2) Add an annotation CHQ57_03840 SM00448 cheY-homologous receiver domain CHQ57_03840 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CHQ57_03850 SM00014 Acid phosphatase homologues CHQ57_03925 SM00670 Large family of predicted nucleotide-binding domains CHQ57_03930 SM00382 ATPases associated with a variety of cellular activities CHQ57_03965 SM01329 CHQ57_03965 CHQ57_03970 SM00917 LeuA allosteric (dimerisation) domain CHQ57_03980 SM00014 Acid phosphatase homologues CHQ57_04045 SM01130 CHQ57_04045 CHQ57_04090 SM00073 Histidine Phosphotransfer domain CHQ57_04090 SM00091 PAS domain CHQ57_04090 SM00387 Histidine kinase-like ATPases CHQ57_04090 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_04090 SM00448 cheY-homologous receiver domain CHQ57_04095 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CHQ57_04105 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_04105 SM00073 Histidine Phosphotransfer domain CHQ57_04105 SM00091 PAS domain CHQ57_04105 SM00387 Histidine kinase-like ATPases CHQ57_04105 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_04105 SM00448 cheY-homologous receiver domain CHQ57_04110 SM00052 Putative diguanylate phosphodiesterase CHQ57_04110 SM00448 cheY-homologous receiver domain CHQ57_04115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_04115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_04120 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CHQ57_04135 SM00382 ATPases associated with a variety of cellular activities CHQ57_04135 SM00930 CHQ57_04135 CHQ57_04165 SM00257 Lysin motif CHQ57_04165 SM00646 CHQ57_04165 CHQ57_04170 SM00853 MutL C terminal dimerisation domain CHQ57_04170 SM01340 CHQ57_04170 CHQ57_04190 SM00244 prohibitin homologues CHQ57_04195 SM00244 prohibitin homologues CHQ57_04240 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CHQ57_04260 SM00530 Helix-turn-helix XRE-family like proteins CHQ57_04275 SM00650 Ribosomal RNA adenine dimethylases CHQ57_04305 SM00271 DnaJ molecular chaperone homology domain CHQ57_04320 SM00382 ATPases associated with a variety of cellular activities CHQ57_04340 SM00382 ATPases associated with a variety of cellular activities CHQ57_04395 SM00530 Helix-turn-helix XRE-family like proteins CHQ57_04405 SM00387 Histidine kinase-like ATPases CHQ57_04405 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_04405 SM00448 cheY-homologous receiver domain CHQ57_04410 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CHQ57_04410 SM00495 Chitin-binding domain type 3 CHQ57_04410 SM00636 CHQ57_04410 CHQ57_04420 SM00495 Chitin-binding domain type 3 CHQ57_04430 SM00100 Cyclic nucleotide-monophosphate binding domain CHQ57_04430 SM00419 helix_turn_helix, cAMP Regulatory protein CHQ57_04465 SM00267 diguanylate cyclase CHQ57_04475 SM00260 Two component signalling adaptor domain CHQ57_04475 SM00448 cheY-homologous receiver domain CHQ57_04500 SM00320 WD40 repeats CHQ57_04510 SM00382 ATPases associated with a variety of cellular activities CHQ57_04510 SM00448 cheY-homologous receiver domain CHQ57_04535 SM00052 Putative diguanylate phosphodiesterase CHQ57_04540 SM00978 CHQ57_04540 CHQ57_04550 SM00382 ATPases associated with a variety of cellular activities CHQ57_04560 SM01005 Alanine racemase, C-terminal domain CHQ57_04575 SM00052 Putative diguanylate phosphodiesterase CHQ57_04600 SM00421 helix_turn_helix, Lux Regulon CHQ57_04600 SM00448 cheY-homologous receiver domain CHQ57_04605 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_04605 SM00387 Histidine kinase-like ATPases CHQ57_04605 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_04605 SM00448 cheY-homologous receiver domain CHQ57_04635 SM00448 cheY-homologous receiver domain CHQ57_04645 SM00138 Methyltransferase, chemotaxis proteins CHQ57_04650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_04650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_04655 SM00260 Two component signalling adaptor domain CHQ57_04660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_04660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_04665 SM00073 Histidine Phosphotransfer domain CHQ57_04665 SM00260 Two component signalling adaptor domain CHQ57_04665 SM00387 Histidine kinase-like ATPases CHQ57_04665 SM01231 CHQ57_04665 CHQ57_04675 SM00448 cheY-homologous receiver domain CHQ57_04680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_04725 SM00342 helix_turn_helix, arabinose operon control protein CHQ57_04725 SM00478 endonuclease III CHQ57_04725 SM01009 AlkA N-terminal domain CHQ57_04740 SM00463 Small MutS-related domain CHQ57_04770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_04795 SM01007 Class II Aldolase and Adducin N-terminal domain CHQ57_04810 SM00420 helix_turn_helix, Deoxyribose operon repressor CHQ57_04810 SM01134 CHQ57_04810 CHQ57_04860 SM00267 diguanylate cyclase CHQ57_04865 SM01126 CHQ57_04865 CHQ57_04870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_04870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_04880 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_04880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_04925 SM00506 Appr-1"-p processing enzyme CHQ57_05040 SM00530 Helix-turn-helix XRE-family like proteins CHQ57_05080 SM00830 Chorismate mutase type II CHQ57_05115 SM00422 helix_turn_helix, mercury resistance CHQ57_05190 SM01126 CHQ57_05190 CHQ57_05210 SM01068 Putative carbohydrate binding domain CHQ57_05215 SM00382 ATPases associated with a variety of cellular activities CHQ57_05340 SM00900 CHQ57_05340 CHQ57_05380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_05380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_05410 SM01329 CHQ57_05410 CHQ57_05415 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CHQ57_05415 SM00475 5'-3' exonuclease CHQ57_05425 SM00267 diguanylate cyclase CHQ57_05430 SM00028 Tetratricopeptide repeats CHQ57_05510 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CHQ57_05555 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CHQ57_05565 SM00935 Outer membrane protein (OmpH-like) CHQ57_05595 SM00481 DNA polymerase alpha chain like domain CHQ57_05605 SM00862 Transcriptional regulatory protein, C terminal CHQ57_05650 SM00382 ATPases associated with a variety of cellular activities CHQ57_05665 SM00977 TilS substrate C-terminal domain CHQ57_05670 SM00267 diguanylate cyclase CHQ57_05705 SM00642 Alpha-amylase domain CHQ57_05710 SM00342 helix_turn_helix, arabinose operon control protein CHQ57_05720 SM00788 Adenylosuccinate synthetase CHQ57_05765 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CHQ57_05765 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CHQ57_05765 SM00493 CHQ57_05765 CHQ57_05775 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_05795 SM00382 ATPases associated with a variety of cellular activities CHQ57_05800 SM00382 ATPases associated with a variety of cellular activities CHQ57_05820 SM00091 PAS domain CHQ57_05820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_05820 SM00387 Histidine kinase-like ATPases CHQ57_05820 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_05820 SM00448 cheY-homologous receiver domain CHQ57_05850 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CHQ57_05850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_05855 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CHQ57_05865 SM00852 Probable molybdopterin binding domain CHQ57_05875 SM00382 ATPases associated with a variety of cellular activities CHQ57_05890 SM00382 ATPases associated with a variety of cellular activities CHQ57_05890 SM00448 cheY-homologous receiver domain CHQ57_05895 SM00387 Histidine kinase-like ATPases CHQ57_05895 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_05945 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CHQ57_05965 SM00919 Malic enzyme, NAD binding domain CHQ57_05965 SM01274 CHQ57_05965 CHQ57_05975 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_05980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_05980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_06055 SM00267 diguanylate cyclase CHQ57_06080 SM00382 ATPases associated with a variety of cellular activities CHQ57_06120 SM00382 ATPases associated with a variety of cellular activities CHQ57_06125 SM00382 ATPases associated with a variety of cellular activities CHQ57_06140 SM00448 cheY-homologous receiver domain CHQ57_06140 SM00862 Transcriptional regulatory protein, C terminal CHQ57_06210 SM00855 Phosphoglycerate mutase family CHQ57_06215 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CHQ57_06270 SM00530 Helix-turn-helix XRE-family like proteins CHQ57_06305 SM00528 Domain in histone-like proteins of HNS family CHQ57_06330 SM00382 ATPases associated with a variety of cellular activities CHQ57_06345 SM01131 CHQ57_06345 CHQ57_06370 SM00271 DnaJ molecular chaperone homology domain CHQ57_06390 SM00640 Glycosyl hydrolases family 32 CHQ57_06395 SM00354 helix_turn _helix lactose operon repressor CHQ57_06410 SM00267 diguanylate cyclase CHQ57_06425 SM00342 helix_turn_helix, arabinose operon control protein CHQ57_06430 SM00919 Malic enzyme, NAD binding domain CHQ57_06430 SM01274 CHQ57_06430 CHQ57_06455 SM00530 Helix-turn-helix XRE-family like proteins CHQ57_06470 SM00267 diguanylate cyclase CHQ57_06490 SM00729 Elongator protein 3, MiaB family, Radical SAM CHQ57_06505 SM01321 CHQ57_06505 CHQ57_06545 SM00642 Alpha-amylase domain CHQ57_06565 SM00155 Phospholipase D. Active site motifs. CHQ57_06645 SM00487 DEAD-like helicases superfamily CHQ57_06645 SM00490 helicase superfamily c-terminal domain CHQ57_06795 SM00528 Domain in histone-like proteins of HNS family CHQ57_06855 SM00858 CHQ57_06855 CHQ57_06945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_06945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_06970 SM01091 Transporter associated domain CHQ57_07025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_07035 SM00729 Elongator protein 3, MiaB family, Radical SAM CHQ57_07035 SM00876 Biotin and Thiamin Synthesis associated domain CHQ57_07060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_07075 SM00890 Domain of unknown function CHQ57_07150 SM00458 Ricin-type beta-trefoil CHQ57_07230 SM01081 Putative carbohydrate binding domain CHQ57_07285 SM00347 helix_turn_helix multiple antibiotic resistance protein CHQ57_07300 SM00382 ATPases associated with a variety of cellular activities CHQ57_07340 SM00382 ATPases associated with a variety of cellular activities CHQ57_07390 SM00052 Putative diguanylate phosphodiesterase CHQ57_07390 SM00091 PAS domain CHQ57_07390 SM00267 diguanylate cyclase CHQ57_07400 SM00354 helix_turn _helix lactose operon repressor CHQ57_07425 SM00257 Lysin motif CHQ57_07430 SM00849 Metallo-beta-lactamase superfamily CHQ57_07445 SM00479 CHQ57_07445 CHQ57_07465 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CHQ57_07495 SM00897 FIST N domain CHQ57_07495 SM01204 CHQ57_07495 CHQ57_07500 SM00387 Histidine kinase-like ATPases CHQ57_07500 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_07500 SM00448 cheY-homologous receiver domain CHQ57_07505 SM00464 Found in ATP-dependent protease La (LON) CHQ57_07510 SM00421 helix_turn_helix, Lux Regulon CHQ57_07510 SM00448 cheY-homologous receiver domain CHQ57_07515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_07515 SM00387 Histidine kinase-like ATPases CHQ57_07520 SM00729 Elongator protein 3, MiaB family, Radical SAM CHQ57_07535 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CHQ57_07560 SM00852 Probable molybdopterin binding domain CHQ57_07590 SM00382 ATPases associated with a variety of cellular activities CHQ57_07610 SM00852 Probable molybdopterin binding domain CHQ57_07625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_07625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_07645 SM00867 YceI-like domain CHQ57_07655 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CHQ57_07695 SM00855 Phosphoglycerate mutase family CHQ57_07705 SM00387 Histidine kinase-like ATPases CHQ57_07725 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CHQ57_07730 SM00363 S4 RNA-binding domain CHQ57_07755 SM00871 Bacterial transcription activator, effector binding domain CHQ57_07855 SM00420 helix_turn_helix, Deoxyribose operon repressor CHQ57_07855 SM01134 CHQ57_07855 CHQ57_07880 SM00830 Chorismate mutase type II CHQ57_07955 SM00382 ATPases associated with a variety of cellular activities CHQ57_08010 SM00382 ATPases associated with a variety of cellular activities CHQ57_08015 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_08015 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CHQ57_08045 SM00052 Putative diguanylate phosphodiesterase CHQ57_08045 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CHQ57_08045 SM00091 PAS domain CHQ57_08045 SM00267 diguanylate cyclase CHQ57_08050 SM00450 Rhodanese Homology Domain CHQ57_08070 SM00981 CHQ57_08070 CHQ57_08130 SM00858 CHQ57_08130 CHQ57_08195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_08195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_08230 SM00382 ATPases associated with a variety of cellular activities CHQ57_08335 SM00840 CHQ57_08335 CHQ57_08415 SM00267 diguanylate cyclase CHQ57_08420 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_08425 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_08455 SM00899 CHQ57_08455 CHQ57_08480 SM00382 ATPases associated with a variety of cellular activities CHQ57_08490 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_08500 SM00382 ATPases associated with a variety of cellular activities CHQ57_08545 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CHQ57_08550 SM00851 MGS-like domain CHQ57_08550 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CHQ57_08555 SM00917 LeuA allosteric (dimerisation) domain CHQ57_08590 SM00487 DEAD-like helicases superfamily CHQ57_08590 SM00490 helicase superfamily c-terminal domain CHQ57_08600 SM01351 CHQ57_08600 CHQ57_08615 SM00422 helix_turn_helix, mercury resistance CHQ57_08640 SM00729 Elongator protein 3, MiaB family, Radical SAM CHQ57_08645 SM00382 ATPases associated with a variety of cellular activities CHQ57_08665 SM00052 Putative diguanylate phosphodiesterase CHQ57_08665 SM00267 diguanylate cyclase CHQ57_08715 SM00342 helix_turn_helix, arabinose operon control protein CHQ57_08720 SM01217 CHQ57_08720 CHQ57_08760 SM00014 Acid phosphatase homologues CHQ57_08770 SM00859 Semialdehyde dehydrogenase, NAD binding domain CHQ57_08835 SM00448 cheY-homologous receiver domain CHQ57_08835 SM00862 Transcriptional regulatory protein, C terminal CHQ57_08840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_08840 SM00387 Histidine kinase-like ATPases CHQ57_08840 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_08845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_08850 SM00267 diguanylate cyclase CHQ57_08920 SM00116 Domain in cystathionine beta-synthase and other proteins. CHQ57_08920 SM01091 Transporter associated domain CHQ57_08945 SM00487 DEAD-like helicases superfamily CHQ57_08945 SM00490 helicase superfamily c-terminal domain CHQ57_08955 SM00052 Putative diguanylate phosphodiesterase CHQ57_08955 SM00267 diguanylate cyclase CHQ57_08970 SM00479 CHQ57_08970 CHQ57_08975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_08990 SM00478 endonuclease III CHQ57_08990 SM00525 CHQ57_08990 CHQ57_09000 SM00900 CHQ57_09000 CHQ57_09035 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CHQ57_09035 SM00091 PAS domain CHQ57_09035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_09070 SM00487 DEAD-like helicases superfamily CHQ57_09070 SM00490 helicase superfamily c-terminal domain CHQ57_09090 SM00448 cheY-homologous receiver domain CHQ57_09090 SM00850 LytTr DNA-binding domain CHQ57_09095 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CHQ57_09100 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CHQ57_09135 SM00382 ATPases associated with a variety of cellular activities CHQ57_09145 SM00382 ATPases associated with a variety of cellular activities CHQ57_09155 SM01005 Alanine racemase, C-terminal domain CHQ57_09190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_09190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_09240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_09240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_09290 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CHQ57_09290 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CHQ57_09295 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CHQ57_09355 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_09355 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CHQ57_09365 SM00382 ATPases associated with a variety of cellular activities CHQ57_09375 SM00360 RNA recognition motif CHQ57_09400 SM00831 Cation transporter/ATPase, N-terminus CHQ57_09420 SM00448 cheY-homologous receiver domain CHQ57_09435 SM00052 Putative diguanylate phosphodiesterase CHQ57_09435 SM00267 diguanylate cyclase CHQ57_09480 SM00316 Ribosomal protein S1-like RNA-binding domain CHQ57_09485 SM00411 bacterial (prokaryotic) histone like domain CHQ57_09500 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CHQ57_09510 SM01144 CHQ57_09510 CHQ57_09535 SM00528 Domain in histone-like proteins of HNS family CHQ57_09550 SM01154 CHQ57_09550 CHQ57_09595 SM00825 Beta-ketoacyl synthase CHQ57_09625 SM00479 CHQ57_09625 CHQ57_09630 SM00100 Cyclic nucleotide-monophosphate binding domain CHQ57_09630 SM00116 Domain in cystathionine beta-synthase and other proteins. CHQ57_09640 SM00346 helix_turn_helix isocitrate lyase regulation CHQ57_09690 SM00710 Parallel beta-helix repeats CHQ57_09695 SM00656 CHQ57_09695 CHQ57_09700 SM01005 Alanine racemase, C-terminal domain CHQ57_09755 SM00382 ATPases associated with a variety of cellular activities CHQ57_09760 SM00382 ATPases associated with a variety of cellular activities CHQ57_09875 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CHQ57_09875 SM00382 ATPases associated with a variety of cellular activities CHQ57_09885 SM00493 CHQ57_09885 CHQ57_09890 SM00387 Histidine kinase-like ATPases CHQ57_09925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_09925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_09925 SM01049 CHQ57_09925 CHQ57_09940 SM00052 Putative diguanylate phosphodiesterase CHQ57_09940 SM00267 diguanylate cyclase CHQ57_09975 SM00823 Phosphopantetheine attachment site CHQ57_09980 SM00822 CHQ57_09980 CHQ57_09985 SM00823 Phosphopantetheine attachment site CHQ57_10010 SM00382 ATPases associated with a variety of cellular activities CHQ57_10055 SM00893 Electron transfer flavoprotein domain CHQ57_10060 SM00893 Electron transfer flavoprotein domain CHQ57_10080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_10080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_10085 SM00729 Elongator protein 3, MiaB family, Radical SAM CHQ57_10115 SM00116 Domain in cystathionine beta-synthase and other proteins. CHQ57_10115 SM01240 CHQ57_10115 CHQ57_10140 SM00342 helix_turn_helix, arabinose operon control protein CHQ57_10160 SM00364 Leucine-rich repeats, bacterial type CHQ57_10160 SM00369 Leucine-rich repeats, typical (most populated) subfamily CHQ57_10175 SM00855 Phosphoglycerate mutase family CHQ57_10265 SM01118 CHQ57_10265 CHQ57_10290 SM00487 DEAD-like helicases superfamily CHQ57_10290 SM00490 helicase superfamily c-terminal domain CHQ57_10300 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CHQ57_10315 SM01144 CHQ57_10315 CHQ57_10335 SM00342 helix_turn_helix, arabinose operon control protein CHQ57_10350 SM00642 Alpha-amylase domain CHQ57_10520 SM01322 CHQ57_10520 CHQ57_10535 SM00382 ATPases associated with a variety of cellular activities CHQ57_10550 SM00237 Domains in Na-Ca exchangers and integrin-beta4 CHQ57_10595 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CHQ57_10595 SM00091 PAS domain CHQ57_10595 SM00387 Histidine kinase-like ATPases CHQ57_10595 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_10595 SM00448 cheY-homologous receiver domain CHQ57_10600 SM00091 PAS domain CHQ57_10605 SM00448 cheY-homologous receiver domain CHQ57_10605 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CHQ57_10645 SM00491 CHQ57_10645 CHQ57_10670 SM00341 Helicase and RNase D C-terminal CHQ57_10670 SM00474 3'-5' exonuclease CHQ57_10675 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_10700 SM00382 ATPases associated with a variety of cellular activities CHQ57_10715 SM00421 helix_turn_helix, Lux Regulon CHQ57_10720 SM00116 Domain in cystathionine beta-synthase and other proteins. CHQ57_10725 SM00382 ATPases associated with a variety of cellular activities CHQ57_10725 SM00487 DEAD-like helicases superfamily CHQ57_10725 SM00490 helicase superfamily c-terminal domain CHQ57_10725 SM00847 Helicase associated domain (HA2) Add an annotation CHQ57_10740 SM00849 Metallo-beta-lactamase superfamily CHQ57_10745 SM00450 Rhodanese Homology Domain CHQ57_10755 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_10765 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CHQ57_10770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_10810 SM00316 Ribosomal protein S1-like RNA-binding domain CHQ57_10815 SM00363 S4 RNA-binding domain CHQ57_10850 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CHQ57_10855 SM00822 CHQ57_10855 CHQ57_10865 SM00825 Beta-ketoacyl synthase CHQ57_10885 SM00382 ATPases associated with a variety of cellular activities CHQ57_10975 SM00822 CHQ57_10975 CHQ57_11015 SM00382 ATPases associated with a variety of cellular activities CHQ57_11025 SM00981 CHQ57_11025 CHQ57_11065 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CHQ57_11065 SM00245 tail specific protease CHQ57_11070 SM00945 ProQ/FINO family CHQ57_11125 SM00100 Cyclic nucleotide-monophosphate binding domain CHQ57_11125 SM00419 helix_turn_helix, cAMP Regulatory protein CHQ57_11160 SM00382 ATPases associated with a variety of cellular activities CHQ57_11180 SM00354 helix_turn _helix lactose operon repressor CHQ57_11185 SM00267 diguanylate cyclase CHQ57_11205 SM00448 cheY-homologous receiver domain CHQ57_11215 SM00411 bacterial (prokaryotic) histone like domain CHQ57_11220 SM00873 B3/4 domain CHQ57_11220 SM00874 tRNA synthetase B5 domain CHQ57_11220 SM00896 Ferredoxin-fold anticodon binding domain CHQ57_11245 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CHQ57_11250 SM00671 Sel1-like repeats. CHQ57_11255 SM00729 Elongator protein 3, MiaB family, Radical SAM CHQ57_11260 SM00434 DNA Topoisomerase IV CHQ57_11290 SM00925 MltA specific insert domain CHQ57_11315 SM00354 helix_turn _helix lactose operon repressor CHQ57_11330 SM00953 CHQ57_11330 CHQ57_11335 SM00487 DEAD-like helicases superfamily CHQ57_11335 SM00490 helicase superfamily c-terminal domain CHQ57_11340 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_11355 SM00463 Small MutS-related domain CHQ57_11360 SM00091 PAS domain CHQ57_11360 SM00267 diguanylate cyclase CHQ57_11380 SM00495 Chitin-binding domain type 3 CHQ57_11390 SM00782 PhnA Zinc-Ribbon CHQ57_11420 SM00327 von Willebrand factor (vWF) type A domain CHQ57_11455 SM00052 Putative diguanylate phosphodiesterase CHQ57_11465 SM00422 helix_turn_helix, mercury resistance CHQ57_11545 SM00347 helix_turn_helix multiple antibiotic resistance protein CHQ57_11630 SM00486 DNA polymerase type-B family CHQ57_11640 SM00267 diguanylate cyclase CHQ57_11650 SM00090 RIO-like kinase CHQ57_11680 SM00518 AP endonuclease family 2 CHQ57_11690 SM00822 CHQ57_11690 CHQ57_11710 SM00382 ATPases associated with a variety of cellular activities CHQ57_11725 SM00267 diguanylate cyclase CHQ57_11730 SM00749 bacterial OsmY and nodulation domain CHQ57_11750 SM00100 Cyclic nucleotide-monophosphate binding domain CHQ57_11750 SM00419 helix_turn_helix, cAMP Regulatory protein CHQ57_11805 SM00857 Resolvase, N terminal domain CHQ57_11825 SM00487 DEAD-like helicases superfamily CHQ57_11840 SM00885 D5 N terminal like CHQ57_11865 SM00822 CHQ57_11865 CHQ57_11910 SM00878 Biotin carboxylase C-terminal domain CHQ57_11910 SM01209 CHQ57_11910 CHQ57_11920 SM00422 helix_turn_helix, mercury resistance CHQ57_11925 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_11960 SM00479 CHQ57_11960 CHQ57_11965 SM00116 Domain in cystathionine beta-synthase and other proteins. CHQ57_11990 SM00382 ATPases associated with a variety of cellular activities CHQ57_12000 SM00411 bacterial (prokaryotic) histone like domain CHQ57_12005 SM00382 ATPases associated with a variety of cellular activities CHQ57_12005 SM00464 Found in ATP-dependent protease La (LON) CHQ57_12010 SM00382 ATPases associated with a variety of cellular activities CHQ57_12010 SM00994 ClpX C4-type zinc finger CHQ57_12010 SM01086 C-terminal, D2-small domain, of ClpB protein CHQ57_12035 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CHQ57_12045 SM00382 ATPases associated with a variety of cellular activities CHQ57_12060 SM00487 DEAD-like helicases superfamily CHQ57_12060 SM00490 helicase superfamily c-terminal domain CHQ57_12060 SM00982 CHQ57_12060 CHQ57_12060 SM01058 CarD-like/TRCF domain CHQ57_12085 SM00382 ATPases associated with a variety of cellular activities CHQ57_12090 SM00382 ATPases associated with a variety of cellular activities CHQ57_12095 SM00387 Histidine kinase-like ATPases CHQ57_12095 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_12095 SM00448 cheY-homologous receiver domain CHQ57_12160 SM00487 DEAD-like helicases superfamily CHQ57_12160 SM00490 helicase superfamily c-terminal domain CHQ57_12185 SM00345 helix_turn_helix gluconate operon transcriptional repressor CHQ57_12210 SM00487 DEAD-like helicases superfamily CHQ57_12210 SM00490 helicase superfamily c-terminal domain CHQ57_12230 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_12250 SM00448 cheY-homologous receiver domain CHQ57_12255 SM00387 Histidine kinase-like ATPases CHQ57_12265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_12265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_12265 SM01049 CHQ57_12265 CHQ57_12370 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_12395 SM00342 helix_turn_helix, arabinose operon control protein CHQ57_12395 SM00871 Bacterial transcription activator, effector binding domain CHQ57_12400 SM00822 CHQ57_12400 CHQ57_12430 SM00859 Semialdehyde dehydrogenase, NAD binding domain CHQ57_12455 SM01321 CHQ57_12455 CHQ57_12465 SM00881 CoA binding domain CHQ57_12480 SM00861 Transketolase, pyrimidine binding domain CHQ57_12520 SM00825 Beta-ketoacyl synthase CHQ57_12610 SM00382 ATPases associated with a variety of cellular activities CHQ57_12620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_12620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_12645 SM00354 helix_turn _helix lactose operon repressor CHQ57_12665 SM00342 helix_turn_helix, arabinose operon control protein CHQ57_12675 SM00382 ATPases associated with a variety of cellular activities CHQ57_12690 SM01007 Class II Aldolase and Adducin N-terminal domain CHQ57_12715 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_12775 SM00267 diguanylate cyclase CHQ57_12775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_12785 SM00091 PAS domain CHQ57_12785 SM00382 ATPases associated with a variety of cellular activities CHQ57_12825 SM00382 ATPases associated with a variety of cellular activities CHQ57_12845 SM00382 ATPases associated with a variety of cellular activities CHQ57_12850 SM00382 ATPases associated with a variety of cellular activities CHQ57_12875 SM00382 ATPases associated with a variety of cellular activities CHQ57_12890 SM00344 helix_turn_helix ASNC type CHQ57_12895 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CHQ57_12905 SM00267 diguanylate cyclase CHQ57_12905 SM00448 cheY-homologous receiver domain CHQ57_12925 SM00316 Ribosomal protein S1-like RNA-binding domain CHQ57_12930 SM00382 ATPases associated with a variety of cellular activities CHQ57_12930 SM01086 C-terminal, D2-small domain, of ClpB protein CHQ57_12940 SM00357 Cold shock protein domain CHQ57_12985 SM00382 ATPases associated with a variety of cellular activities CHQ57_13010 SM00671 Sel1-like repeats. CHQ57_13020 SM00671 Sel1-like repeats. CHQ57_13155 SM00357 Cold shock protein domain CHQ57_13295 SM00382 ATPases associated with a variety of cellular activities CHQ57_13380 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_13425 SM01211 CHQ57_13425 CHQ57_13430 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_13445 SM00382 ATPases associated with a variety of cellular activities CHQ57_13450 SM00564 beta-propeller repeat CHQ57_13470 SM00530 Helix-turn-helix XRE-family like proteins CHQ57_13475 SM00028 Tetratricopeptide repeats CHQ57_13485 SM00562 CHQ57_13485 CHQ57_13510 SM00271 DnaJ molecular chaperone homology domain CHQ57_13560 SM00028 Tetratricopeptide repeats CHQ57_13565 SM00450 Rhodanese Homology Domain CHQ57_13580 SM01323 CHQ57_13580 CHQ57_13595 SM00116 Domain in cystathionine beta-synthase and other proteins. CHQ57_13750 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CHQ57_13750 SM00465 GIY-YIG type nucleases (URI domain) CHQ57_13755 SM00421 helix_turn_helix, Lux Regulon CHQ57_13755 SM00448 cheY-homologous receiver domain CHQ57_13775 SM00382 ATPases associated with a variety of cellular activities CHQ57_13780 SM00849 Metallo-beta-lactamase superfamily CHQ57_13815 SM00491 CHQ57_13815 CHQ57_13835 SM00098 Alkaline phosphatase homologues CHQ57_13840 SM00098 Alkaline phosphatase homologues CHQ57_13860 SM00421 helix_turn_helix, Lux Regulon CHQ57_13860 SM00448 cheY-homologous receiver domain CHQ57_13865 SM00387 Histidine kinase-like ATPases CHQ57_13875 SM00267 diguanylate cyclase CHQ57_13880 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_13880 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CHQ57_13890 SM00382 ATPases associated with a variety of cellular activities CHQ57_13915 SM01091 Transporter associated domain CHQ57_13925 SM00382 ATPases associated with a variety of cellular activities CHQ57_13990 SM00382 ATPases associated with a variety of cellular activities CHQ57_13990 SM00448 cheY-homologous receiver domain CHQ57_13995 SM00091 PAS domain CHQ57_13995 SM00387 Histidine kinase-like ATPases CHQ57_13995 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_14000 SM00382 ATPases associated with a variety of cellular activities CHQ57_14025 SM00116 Domain in cystathionine beta-synthase and other proteins. CHQ57_14025 SM00924 MgtE intracellular N domain CHQ57_14040 SM00047 Lysozyme subfamily 2 CHQ57_14085 SM00138 Methyltransferase, chemotaxis proteins CHQ57_14090 SM00260 Two component signalling adaptor domain CHQ57_14090 SM00448 cheY-homologous receiver domain CHQ57_14095 SM00858 CHQ57_14095 CHQ57_14125 SM00363 S4 RNA-binding domain CHQ57_14130 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CHQ57_14170 SM00357 Cold shock protein domain CHQ57_14180 SM00861 Transketolase, pyrimidine binding domain CHQ57_14205 SM00487 DEAD-like helicases superfamily CHQ57_14205 SM00490 helicase superfamily c-terminal domain CHQ57_14250 SM00984 UDP binding domain CHQ57_14390 SM00528 Domain in histone-like proteins of HNS family CHQ57_14445 SM00363 S4 RNA-binding domain CHQ57_14465 SM00481 DNA polymerase alpha chain like domain CHQ57_14590 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CHQ57_14690 SM00382 ATPases associated with a variety of cellular activities CHQ57_14700 SM00260 Two component signalling adaptor domain CHQ57_14705 SM00260 Two component signalling adaptor domain CHQ57_14725 SM00448 cheY-homologous receiver domain CHQ57_14730 SM00073 Histidine Phosphotransfer domain CHQ57_14730 SM00260 Two component signalling adaptor domain CHQ57_14730 SM00387 Histidine kinase-like ATPases CHQ57_14730 SM01231 CHQ57_14730 CHQ57_14740 SM00448 cheY-homologous receiver domain CHQ57_14755 SM00382 ATPases associated with a variety of cellular activities CHQ57_14755 SM00962 SRP54-type protein, GTPase domain CHQ57_14815 SM00382 ATPases associated with a variety of cellular activities CHQ57_14845 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CHQ57_14880 SM00530 Helix-turn-helix XRE-family like proteins CHQ57_14905 SM00729 Elongator protein 3, MiaB family, Radical SAM CHQ57_14915 SM00116 Domain in cystathionine beta-synthase and other proteins. CHQ57_14940 SM01126 CHQ57_14940 CHQ57_14975 SM00382 ATPases associated with a variety of cellular activities CHQ57_14985 SM00382 ATPases associated with a variety of cellular activities CHQ57_14990 SM00448 cheY-homologous receiver domain CHQ57_14990 SM00862 Transcriptional regulatory protein, C terminal CHQ57_14995 SM00387 Histidine kinase-like ATPases CHQ57_15060 SM00481 DNA polymerase alpha chain like domain CHQ57_15090 SM01329 CHQ57_15090 CHQ57_15095 SM00342 helix_turn_helix, arabinose operon control protein CHQ57_15135 SM00354 helix_turn _helix lactose operon repressor CHQ57_15225 SM00028 Tetratricopeptide repeats CHQ57_15225 SM00448 cheY-homologous receiver domain CHQ57_15290 SM00091 PAS domain CHQ57_15290 SM00267 diguanylate cyclase CHQ57_15315 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CHQ57_15380 SM00382 ATPases associated with a variety of cellular activities CHQ57_15420 SM00091 PAS domain CHQ57_15420 SM00387 Histidine kinase-like ATPases CHQ57_15420 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_15425 SM00448 cheY-homologous receiver domain CHQ57_15425 SM00862 Transcriptional regulatory protein, C terminal CHQ57_15435 SM00267 diguanylate cyclase CHQ57_15440 SM00382 ATPases associated with a variety of cellular activities CHQ57_15450 SM00342 helix_turn_helix, arabinose operon control protein CHQ57_15475 SM00448 cheY-homologous receiver domain CHQ57_15480 SM00387 Histidine kinase-like ATPases CHQ57_15485 SM00919 Malic enzyme, NAD binding domain CHQ57_15485 SM01274 CHQ57_15485 CHQ57_15500 SM00347 helix_turn_helix multiple antibiotic resistance protein CHQ57_15515 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_15550 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CHQ57_15550 SM00292 breast cancer carboxy-terminal domain CHQ57_15550 SM00532 Ligase N family CHQ57_15555 SM00771 ZipA, C-terminal domain (FtsZ-binding) CHQ57_15590 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_15615 SM00363 S4 RNA-binding domain CHQ57_15640 SM00861 Transketolase, pyrimidine binding domain CHQ57_15650 SM00731 SprT homologues. CHQ57_15675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_15685 SM00732 Likely ribonuclease with RNase H fold. CHQ57_15705 SM00460 Transglutaminase/protease-like homologues CHQ57_15740 SM00986 Uracil DNA glycosylase superfamily CHQ57_15740 SM00987 UreE urease accessory protein, C-terminal domain CHQ57_15775 SM00937 CHQ57_15775 CHQ57_15800 SM01400 CHQ57_15800 CHQ57_15880 SM01022 CHQ57_15880 CHQ57_15890 SM00642 Alpha-amylase domain CHQ57_15905 SM00382 ATPases associated with a variety of cellular activities CHQ57_15915 SM00890 Domain of unknown function CHQ57_15930 SM01150 CHQ57_15930 CHQ57_15995 SM00965 Secretin and TonB N terminus short domain CHQ57_16015 SM00842 Cell division protein FtsA CHQ57_16030 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_16030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_16040 SM00849 Metallo-beta-lactamase superfamily CHQ57_16080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_16080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_16130 SM01236 CHQ57_16130 CHQ57_16135 SM00822 CHQ57_16135 CHQ57_16145 SM00448 cheY-homologous receiver domain CHQ57_16145 SM00862 Transcriptional regulatory protein, C terminal CHQ57_16150 SM00387 Histidine kinase-like ATPases CHQ57_16150 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_16170 SM01240 CHQ57_16170 CHQ57_16180 SM00841 Elongation factor P, C-terminal CHQ57_16180 SM01185 CHQ57_16180 CHQ57_16200 SM00267 diguanylate cyclase CHQ57_16225 SM00267 diguanylate cyclase CHQ57_16230 SM00357 Cold shock protein domain CHQ57_16240 SM00729 Elongator protein 3, MiaB family, Radical SAM CHQ57_16255 SM00116 Domain in cystathionine beta-synthase and other proteins. CHQ57_16255 SM01091 Transporter associated domain CHQ57_16325 SM00936 Penicillin-binding protein 5, C-terminal domain CHQ57_16345 SM00729 Elongator protein 3, MiaB family, Radical SAM CHQ57_16465 SM00267 diguanylate cyclase CHQ57_16475 SM00316 Ribosomal protein S1-like RNA-binding domain CHQ57_16475 SM00322 K homology RNA-binding domain CHQ57_16480 SM01387 CHQ57_16480 CHQ57_16500 SM00316 Ribosomal protein S1-like RNA-binding domain CHQ57_16540 SM00382 ATPases associated with a variety of cellular activities CHQ57_16550 SM01103 CHQ57_16550 CHQ57_16600 SM00861 Transketolase, pyrimidine binding domain CHQ57_16620 SM00382 ATPases associated with a variety of cellular activities CHQ57_16710 SM00052 Putative diguanylate phosphodiesterase CHQ57_16710 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CHQ57_16710 SM00091 PAS domain CHQ57_16710 SM00267 diguanylate cyclase CHQ57_16735 SM00878 Biotin carboxylase C-terminal domain CHQ57_16760 SM00829 Enoylreductase CHQ57_16790 SM01266 CHQ57_16790 CHQ57_16795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_16825 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CHQ57_16835 SM00870 CHQ57_16835 CHQ57_16850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_16850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_16895 SM00382 ATPases associated with a variety of cellular activities CHQ57_16920 SM00852 Probable molybdopterin binding domain CHQ57_16930 SM00825 Beta-ketoacyl synthase CHQ57_16935 SM00822 CHQ57_16935 CHQ57_16945 SM00825 Beta-ketoacyl synthase CHQ57_17005 SM00563 Phosphate acyltransferases CHQ57_17030 SM00477 DNA/RNA non-specific endonuclease CHQ57_17030 SM00892 DNA/RNA non-specific endonuclease CHQ57_17040 SM01057 Eukaryotic-type carbonic anhydrase CHQ57_17065 SM00382 ATPases associated with a variety of cellular activities CHQ57_17080 SM01012 CHQ57_17080 CHQ57_17090 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CHQ57_17120 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CHQ57_17160 SM00382 ATPases associated with a variety of cellular activities CHQ57_17165 SM00382 ATPases associated with a variety of cellular activities CHQ57_17215 SM00028 Tetratricopeptide repeats CHQ57_17220 SM00495 Chitin-binding domain type 3 CHQ57_17220 SM00636 CHQ57_17220 CHQ57_17265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_17265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_17275 SM00357 Cold shock protein domain CHQ57_17315 SM00479 CHQ57_17315 CHQ57_17350 SM00052 Putative diguanylate phosphodiesterase CHQ57_17350 SM00091 PAS domain CHQ57_17350 SM00267 diguanylate cyclase CHQ57_17405 SM00382 ATPases associated with a variety of cellular activities CHQ57_17415 SM00450 Rhodanese Homology Domain CHQ57_17445 SM00052 Putative diguanylate phosphodiesterase CHQ57_17460 SM00382 ATPases associated with a variety of cellular activities CHQ57_17470 SM00260 Two component signalling adaptor domain CHQ57_17470 SM00448 cheY-homologous receiver domain CHQ57_17475 SM00327 von Willebrand factor (vWF) type A domain CHQ57_17485 SM00635 Bacterial Ig-like domain 2 CHQ57_17530 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CHQ57_17545 SM00448 cheY-homologous receiver domain CHQ57_17550 SM00448 cheY-homologous receiver domain CHQ57_17555 SM00100 Cyclic nucleotide-monophosphate binding domain CHQ57_17555 SM00387 Histidine kinase-like ATPases CHQ57_17570 SM00382 ATPases associated with a variety of cellular activities CHQ57_17635 SM00487 DEAD-like helicases superfamily CHQ57_17745 SM00530 Helix-turn-helix XRE-family like proteins CHQ57_17830 SM00422 helix_turn_helix, mercury resistance CHQ57_17835 SM00528 Domain in histone-like proteins of HNS family CHQ57_17840 SM00382 ATPases associated with a variety of cellular activities CHQ57_17880 SM00487 DEAD-like helicases superfamily CHQ57_17880 SM00490 helicase superfamily c-terminal domain CHQ57_17895 SM00052 Putative diguanylate phosphodiesterase CHQ57_17895 SM00267 diguanylate cyclase CHQ57_17910 SM00883 Chaperonin 10 Kd subunit CHQ57_17995 SM00729 Elongator protein 3, MiaB family, Radical SAM CHQ57_18010 SM00422 helix_turn_helix, mercury resistance CHQ57_18015 SM00798 AICARFT/IMPCHase bienzyme CHQ57_18015 SM00851 MGS-like domain CHQ57_18020 SM01209 CHQ57_18020 CHQ57_18020 SM01210 CHQ57_18020 CHQ57_18035 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CHQ57_18035 SM00632 CHQ57_18035 CHQ57_18035 SM00642 Alpha-amylase domain CHQ57_18065 SM00778 Zinc-binding domain of primase-helicase CHQ57_18100 SM00400 zinc finger CHQ57_18100 SM00493 CHQ57_18100 CHQ57_18100 SM00766 DNA primase DnaG DnaB-binding CHQ57_18130 SM00257 Lysin motif CHQ57_18170 SM01192 CHQ57_18170 CHQ57_18170 SM01193 CHQ57_18170 CHQ57_18185 SM00954 Region found in RelA / SpoT proteins CHQ57_18195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_18195 SM00387 Histidine kinase-like ATPases CHQ57_18195 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_18195 SM00448 cheY-homologous receiver domain CHQ57_18205 SM00644 CHQ57_18205 CHQ57_18225 SM00358 Double-stranded RNA binding motif CHQ57_18225 SM00535 Ribonuclease III family CHQ57_18235 SM00838 Elongation factor G C-terminus CHQ57_18330 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CHQ57_18365 SM00382 ATPases associated with a variety of cellular activities CHQ57_18385 SM00091 PAS domain CHQ57_18385 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_18405 SM00357 Cold shock protein domain CHQ57_18435 SM00244 prohibitin homologues CHQ57_18445 SM00116 Domain in cystathionine beta-synthase and other proteins. CHQ57_18450 SM00382 ATPases associated with a variety of cellular activities CHQ57_18500 SM00422 helix_turn_helix, mercury resistance CHQ57_18555 SM00345 helix_turn_helix gluconate operon transcriptional repressor CHQ57_18620 SM00344 helix_turn_helix ASNC type CHQ57_18635 SM00347 helix_turn_helix multiple antibiotic resistance protein CHQ57_18645 SM00829 Enoylreductase CHQ57_18670 SM00420 helix_turn_helix, Deoxyribose operon repressor CHQ57_18670 SM01134 CHQ57_18670 CHQ57_18705 SM00822 CHQ57_18705 CHQ57_18725 SM00382 ATPases associated with a variety of cellular activities CHQ57_18735 SM00448 cheY-homologous receiver domain CHQ57_18735 SM00862 Transcriptional regulatory protein, C terminal CHQ57_18740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_18740 SM00387 Histidine kinase-like ATPases CHQ57_18740 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_18820 SM00487 DEAD-like helicases superfamily CHQ57_18820 SM00490 helicase superfamily c-terminal domain CHQ57_18830 SM00849 Metallo-beta-lactamase superfamily CHQ57_18910 SM01152 CHQ57_18910 CHQ57_18930 SM00382 ATPases associated with a variety of cellular activities CHQ57_18945 SM00487 DEAD-like helicases superfamily CHQ57_18945 SM00490 helicase superfamily c-terminal domain CHQ57_18990 SM00411 bacterial (prokaryotic) histone like domain CHQ57_19005 SM00382 ATPases associated with a variety of cellular activities CHQ57_19040 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CHQ57_19045 SM01133 CHQ57_19045 CHQ57_19125 SM01091 Transporter associated domain CHQ57_19180 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CHQ57_19190 SM00382 ATPases associated with a variety of cellular activities CHQ57_19220 SM00450 Rhodanese Homology Domain CHQ57_19230 SM00345 helix_turn_helix gluconate operon transcriptional repressor CHQ57_19280 SM00342 helix_turn_helix, arabinose operon control protein CHQ57_19315 SM00421 helix_turn_helix, Lux Regulon CHQ57_19365 SM00382 ATPases associated with a variety of cellular activities CHQ57_19380 SM00363 S4 RNA-binding domain CHQ57_19395 SM00345 helix_turn_helix gluconate operon transcriptional repressor CHQ57_19395 SM00895 CHQ57_19395 CHQ57_19435 SM00421 helix_turn_helix, Lux Regulon CHQ57_19450 SM00357 Cold shock protein domain CHQ57_19450 SM00955 CHQ57_19450 CHQ57_19485 SM00271 DnaJ molecular chaperone homology domain CHQ57_19525 SM00487 DEAD-like helicases superfamily CHQ57_19525 SM00490 helicase superfamily c-terminal domain CHQ57_19575 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CHQ57_19585 SM01126 CHQ57_19585 CHQ57_19595 SM00862 Transcriptional regulatory protein, C terminal CHQ57_19745 SM01118 CHQ57_19745 CHQ57_19760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CHQ57_19765 SM00382 ATPases associated with a variety of cellular activities CHQ57_19775 SM00478 endonuclease III CHQ57_19775 SM00525 CHQ57_19775 CHQ57_19800 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_19840 SM00267 diguanylate cyclase CHQ57_19845 SM01130 CHQ57_19845 CHQ57_19915 SM01266 CHQ57_19915 CHQ57_19920 SM00642 Alpha-amylase domain CHQ57_19930 SM00354 helix_turn _helix lactose operon repressor CHQ57_19975 SM00354 helix_turn _helix lactose operon repressor CHQ57_19985 SM00870 CHQ57_19985 CHQ57_20000 SM00851 MGS-like domain CHQ57_20035 SM00260 Two component signalling adaptor domain CHQ57_20035 SM00448 cheY-homologous receiver domain CHQ57_20040 SM00873 B3/4 domain CHQ57_20075 SM01207 CHQ57_20075 CHQ57_20080 SM00905 Dihydroneopterin aldolase CHQ57_20100 SM00833 Cobalamin synthesis protein cobW C-terminal domain CHQ57_20110 SM00052 Putative diguanylate phosphodiesterase CHQ57_20125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_20125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_20130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_20140 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CHQ57_20140 SM00267 diguanylate cyclase CHQ57_20160 SM00345 helix_turn_helix gluconate operon transcriptional repressor CHQ57_20160 SM00895 CHQ57_20160 CHQ57_20165 SM00644 CHQ57_20165 CHQ57_20220 SM00957 SecA DEAD-like domain CHQ57_20220 SM00958 SecA preprotein cross-linking domain CHQ57_20235 SM00864 Tubulin/FtsZ family, GTPase domain CHQ57_20235 SM00865 Tubulin/FtsZ family, C-terminal domain CHQ57_20240 SM00842 Cell division protein FtsA CHQ57_20330 SM00749 bacterial OsmY and nodulation domain CHQ57_20380 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CHQ57_20385 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CHQ57_20465 SM00382 ATPases associated with a variety of cellular activities CHQ57_20485 SM00116 Domain in cystathionine beta-synthase and other proteins. CHQ57_20490 SM00382 ATPases associated with a variety of cellular activities CHQ57_20550 SM01126 CHQ57_20550 CHQ57_20555 SM00155 Phospholipase D. Active site motifs. CHQ57_20560 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_20735 SM00838 Elongation factor G C-terminus CHQ57_20735 SM00889 Elongation factor G, domain IV CHQ57_20775 SM00663 RNA polymerase I subunit A N-terminus CHQ57_20800 SM00649 Ribosomal protein L11/L12 CHQ57_20805 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CHQ57_20805 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CHQ57_20860 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CHQ57_20860 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CHQ57_20860 SM00493 CHQ57_20860 CHQ57_20880 SM00387 Histidine kinase-like ATPases CHQ57_20885 SM00448 cheY-homologous receiver domain CHQ57_20885 SM00862 Transcriptional regulatory protein, C terminal CHQ57_20920 SM00382 ATPases associated with a variety of cellular activities CHQ57_20920 SM00448 cheY-homologous receiver domain CHQ57_20930 SM00387 Histidine kinase-like ATPases CHQ57_20930 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_20945 SM00116 Domain in cystathionine beta-synthase and other proteins. CHQ57_20955 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_20960 SM00344 helix_turn_helix ASNC type CHQ57_20970 SM00382 ATPases associated with a variety of cellular activities CHQ57_20970 SM01086 C-terminal, D2-small domain, of ClpB protein CHQ57_20980 SM00363 S4 RNA-binding domain CHQ57_21025 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CHQ57_21025 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CHQ57_21035 SM00342 helix_turn_helix, arabinose operon control protein CHQ57_21045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_21045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_21095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_21095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_21105 SM00382 ATPases associated with a variety of cellular activities CHQ57_21115 SM01038 Beta galactosidase small chain CHQ57_21120 SM00354 helix_turn _helix lactose operon repressor CHQ57_21165 SM00464 Found in ATP-dependent protease La (LON) CHQ57_21170 SM00836 DALR anticodon binding domain CHQ57_21170 SM01016 Arginyl tRNA synthetase N terminal dom CHQ57_21190 SM00382 ATPases associated with a variety of cellular activities CHQ57_21190 SM01086 C-terminal, D2-small domain, of ClpB protein CHQ57_21225 SM00924 MgtE intracellular N domain CHQ57_21230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CHQ57_21230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_21230 SM01358 CHQ57_21230 CHQ57_21300 SM00341 Helicase and RNase D C-terminal CHQ57_21300 SM00487 DEAD-like helicases superfamily CHQ57_21300 SM00490 helicase superfamily c-terminal domain CHQ57_21300 SM00956 CHQ57_21300 CHQ57_21335 SM00382 ATPases associated with a variety of cellular activities CHQ57_21355 SM01230 CHQ57_21355 CHQ57_21400 SM00642 Alpha-amylase domain CHQ57_21420 SM00448 cheY-homologous receiver domain CHQ57_21420 SM00862 Transcriptional regulatory protein, C terminal CHQ57_21425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_21425 SM00387 Histidine kinase-like ATPases CHQ57_21425 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_21435 SM00919 Malic enzyme, NAD binding domain CHQ57_21435 SM01274 CHQ57_21435 CHQ57_21450 SM00487 DEAD-like helicases superfamily CHQ57_21450 SM00490 helicase superfamily c-terminal domain CHQ57_21500 SM00382 ATPases associated with a variety of cellular activities CHQ57_21505 SM00563 Phosphate acyltransferases CHQ57_21530 SM00062 Bacterial periplasmic substrate-binding proteins CHQ57_21535 SM00382 ATPases associated with a variety of cellular activities CHQ57_21565 SM00267 diguanylate cyclase CHQ57_21570 SM00422 helix_turn_helix, mercury resistance CHQ57_21635 SM00829 Enoylreductase CHQ57_21645 SM00052 Putative diguanylate phosphodiesterase CHQ57_21645 SM00267 diguanylate cyclase CHQ57_21735 SM00448 cheY-homologous receiver domain CHQ57_21735 SM00862 Transcriptional regulatory protein, C terminal CHQ57_21740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CHQ57_21740 SM00387 Histidine kinase-like ATPases CHQ57_21740 SM00388 His Kinase A (phosphoacceptor) domain CHQ57_21795 SM00836 DALR anticodon binding domain CHQ57_21820 SM00052 Putative diguanylate phosphodiesterase CHQ57_21835 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CHQ57_21865 SM00849 Metallo-beta-lactamase superfamily CHQ57_21870 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CHQ57_21870 SM00382 ATPases associated with a variety of cellular activities CHQ57_21875 SM00345 helix_turn_helix gluconate operon transcriptional repressor CHQ57_21875 SM00866 CHQ57_21875 CHQ57_21890 SM00354 helix_turn _helix lactose operon repressor CHQ57_21910 SM00382 ATPases associated with a variety of cellular activities CHQ57_21915 SM00382 ATPases associated with a variety of cellular activities CHQ57_21920 SM00342 helix_turn_helix, arabinose operon control protein CHQ57_21930 SM00450 Rhodanese Homology Domain CHQ57_21965 SM00357 Cold shock protein domain CHQ57_21965 SM00382 ATPases associated with a variety of cellular activities CHQ57_21965 SM00959 Rho termination factor, N-terminal domain CHQ57_21975 SM00487 DEAD-like helicases superfamily CHQ57_21975 SM00490 helicase superfamily c-terminal domain CHQ57_21995 SM00052 Putative diguanylate phosphodiesterase CHQ57_21995 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CHQ57_21995 SM00091 PAS domain CHQ57_21995 SM00267 diguanylate cyclase CHQ57_22005 SM01004 Delta-aminolevulinic acid dehydratase CHQ57_22115 SM00421 helix_turn_helix, Lux Regulon CHQ57_22125 SM00420 helix_turn_helix, Deoxyribose operon repressor CHQ57_22125 SM01134 CHQ57_22125 CHQ57_22130 SM00448 cheY-homologous receiver domain CHQ57_22130 SM00862 Transcriptional regulatory protein, C terminal CHQ57_22160 SM00382 ATPases associated with a variety of cellular activities CHQ57_22200 SM00470 ParB-like nuclease domain CHQ57_22215 SM01228 CHQ57_22215 CHQ57_22230 SM00382 ATPases associated with a variety of cellular activities CHQ57_22235 SM00382 ATPases associated with a variety of cellular activities CHQ57_22250 SM00965 Secretin and TonB N terminus short domain CHQ57_22260 SM00382 ATPases associated with a variety of cellular activities CHQ57_22275 SM00382 ATPases associated with a variety of cellular activities CHQ57_22280 SM00382 ATPases associated with a variety of cellular activities CHQ57_22325 SM01234 CHQ57_22325 CHQ57_22340 SM00382 ATPases associated with a variety of cellular activities CHQ57_22350 SM00062 Bacterial periplasmic substrate-binding proteins