 CHQ57_00015 NONE
        gyrB    6098 ..    6116 + -11.7   -5.1287   GTCAGACAGCAATAA             GCCGCTC CTTGT GAGCGGC             TTTTTTACATCTGCA 100 49
 CHQ57_00040 NONE
 CHQ57_00045    9497 ..    9526 + -13.7  -4.58283   TAAGTGACAAGAGAT       GAAAAAGGCCTGC GATT GCAGGCCTTTTTG        TTTTTGGCAGGCTTG 100 38
 CHQ57_00055   11438 ..   11472 + -16.6  -2.51464   CTCGGCCAGCAGCTC    CATGGCGCGCAGCAG ACGCCA CTGCTG-GCGCCATG     CTTGATAGCTCATGC  83 144
 CHQ57_00065   13446 ..   13465 +  -7.1  -3.61715   CGATCAGGCTGGGTT            GTTGGGG ATTATC CCCCAGC             TTCTTGCGCAGACTG  60 178
 CHQ57_00115   29351 ..   29364 +  -6.7   -3.1886   GCAGCAACGCCAGCA               CATCG TGGG CGATG                TTGATGGGGTTGGCT  57 493
 CHQ57_00135   32326 ..   32342 +  -7.9  -3.21276   GCACCATTTTAAGTG              CGCCGGT TAA ACGGGCG              TGTTGTGGAACGAAA  61 35
 CHQ57_00140 NONE
 CHQ57_00145   32567 ..   32586 +  -2.8  -3.53779   TTGCTGTATGATGAA            GATGACCG AAAG TGGTTGTC             TTGGTGTTTTGAAAG  49 44
 CHQ57_00150   32715 ..   32730 +  -8.2  -4.84529   CCATATTCAGAAAAA              CCTCGC TTCG GCGGGG               TTTTTCGCTTTCTGA  93 38
 CHQ57_00155   33478 ..   33501 +   -14  -2.62616   AGCTGCCAGACAGCA          TGGATACCAC AGTC GTGGTATCCA           TGCTGTCACGGATCA  84 103
 CHQ57_00200   41963 ..   41983 +    -4  -2.78384   CCGGTTTGATCCGAC           GCTGATGGC GGAT GCCAT-GGC            TCTGCTGGAGGCGGG  43 149
 CHQ57_00205   43105 ..   43120 +  -7.5  -3.32647   AGAAGCAGCCGAATA              CCGCC TGCTGT GGCGG               TTGCTGTGCTTCCCG  56 360
 CHQ57_00215   44340 ..   44380 +  -5.9  -3.01712   AGAACCAGGGCAGCA  GCACCATCAGCAGGCCG AGCAGGC CGGCCAGCCGGTGGCGA  TATTGCCAGCCGGCA  49 243
 CHQ57_00230   46394 ..   46405 +  -2.2  -4.65895   CGGCGAAGTAATCCA                GC-CC CAT GGCGC                TTTTTACCTCCGCCA  68 30
 CHQ57_00245   49629 ..   49656 +  -7.7  -3.21099   GGGTGGCCGTGCTCA        CTGACCGTCAG GCCACG CTGCTGGTCAG         TTCATCCTGCGCCGA  61 82
 CHQ57_00255   52188 ..   52205 +  -9.8  -6.07374   CACCCAGTACAATAA             CGGCCC CTTTAT GGGCCG              TTTTTTGTTTTTTAT 100 62
 CHQ57_00260   53672 ..   53691 +    -7  -4.12603   AGTTCACTATTTTAT            CCGGCGGG GCTG CCTGCCTG             TTCTTGTTTGCTGGC  70 89
 CHQ57_00265 NONE
 CHQ57_00270   55248 ..   55274 +  -7.3  -3.12668   GTTGCGATAGGTCTC        GCCGGGCAGCAG GTAC TTGCTG-TCGGC         TTCAATGTCAGACTG  54 179
 CHQ57_00305 NONE
 CHQ57_00310   64845 ..   64893 +    -9  -2.71177   TTGACCTTGACCCTG TAACCGTTCACCGGGAG-GATGTT GAC AACAACTCTTCCGG-GAGCGGGTA GTCTGTTTTCTCTAT  63 23
 CHQ57_00320   67559 ..   67575 +  -9.4  -2.53876   GAAAATGACGTGAAG              GGGGGA TTTGC TCCCCC              TCCATTCAGCTCAAG  62 28
 CHQ57_00330 NONE
 CHQ57_00335   70517 ..   70527 +  -4.6   -2.9953   CAAGGCGTTCCGTCA                 GCTG ATG CGGC                 TCTGATTGTCATTCA  48 10
 CHQ57_00340   71875 ..   71895 + -18.3  -3.75153   CAGCATGAAAAAGAA            GACCCGGGC TTG GCCCGGGTC            TTTGCATTCAAGGGA 100 62
 CHQ57_00365   76062 ..   76099 +  -3.6  -2.71263   AAGACCTGCCAAAGT  TCGTATTTCG-GGCCG AGAGAAAC CGGCCACGAAGTA-GA   TGCTTACGCGAACTT  43 228
 CHQ57_00370   78030 ..   78050 + -18.3  -4.66537   ATTGTATAAATGAGG            GGCCCTGCC ATT GGCAGGGCC            TTTTCTATTGGCGGC 100 52
 CHQ57_00375   78923 ..   78940 +  -6.9  -3.65034   ACCGCCAGGGGATCA             GGCATCG ACTT CGCTGCC              TTCTCTCTCATCTTT  63 47
 CHQ57_00385   81712 ..   81724 +  -3.3   -4.1721   GTCAGATGAGAGAAG                CCCTA TCA TTGGG                TTTTGGGATGTGAAT  60 137
 CHQ57_00390   81920 ..   81948 + -13.4  -4.65747   TTGCTAACAAGAATG        CAGAGTTAAGAA CAAAA TTCTTAACTCTG        TTTTCTTCAGCCTTG 100 50
 CHQ57_00395 NONE
         rrf   85275 ..   85293 +   -16  -5.68438   ACCCAACACGAAGAA             CCCCGCTC ATC GAGCGGGG             TTTTTTATTTCCTGA 100 41
 CHQ57_00415   89284 ..   89300 +  -3.6  -3.62597   AGAAGGCGCGGATAA              GAGGCT CTTCC AGCCGC              TTCTTGAGCACTGCG  51 64
 CHQ57_00425   91907 ..   91927 + -18.3  -4.27316   GACAGCTATAAAAAA            GCCCCGCTC ATC GAGCGGGGC            TTTTGCATTCAGAAA 100 135
 CHQ57_00435   94323 ..   94360 + -17.1  -2.62396   TGACCTGGGTTTCAG   AAACGACAATGCCAGCC CCGG GGCTGGCATTGTCGTGA    TCGTCTGCGCAGGTA 100 134
 CHQ57_00460   98719 ..   98754 +  -6.2  -3.72893   TAAAATGCCGCCTTC    TGTTTGCCCCGC AATCGAAGGCCA GCGGGGCAGATA     TTTGCTCGAGCAATG  63 88
 CHQ57_00465 NONE
        rpmG   99234 ..   99250 + -10.8  -5.64274   CTGCATTCCCAAAAG              CCCGGC CCAGT GCCGGG              TTTTTTTATGGCTGG 100 51
 CHQ57_00475 NONE
 CHQ57_00480  100584 ..  100598 +  -2.7  -4.17048   TTTTGTTCTCATTGC               CAGCG CTGAC CGCAG               TTATTTTGACCAAAA  60 17
 CHQ57_00485  101697 ..  101718 + -10.9  -4.11412   GTGCGCCGCACTAAA           CAGGCTACT CTCG GGTAGCCTG            TTTGCTTGTTACTTG  88 74
 CHQ57_00495  103497 ..  103516 +   -15  -3.78775   GCTGACAGATGCAAA            CAGGGCCC TTTC GGGCCCTG             TTTCGTCATGCCGGC 100 36
        waaF NONE
 CHQ57_00510  106982 ..  107000 +   -16  -5.48213   AGTGGCCATAAAAAA             CGGAGCGC CAG GCGCTCCG             TTTTTGTTTTCCGTA 100 47
 CHQ57_00530 NONE
 CHQ57_00535  111375 ..  111390 +  -2.6  -2.54896   CGCGGGTCGCACCCT              GG-TCAA ACT TTGATCC              TGCCTTGACTGGCGA  38 13
 CHQ57_00540  111601 ..  111626 + -16.1    -5.252   CCACGCATTGAGAGA         GCAGGCGGGCC TTGG GGCCCGCCTGA          TTTTTTGTGCGGCTC 100 42
 CHQ57_00545  112311 ..  112330 + -10.7   -2.5409   TCGAAAACAGCGACA            GGGCCAC CTTGGT GTGGCCC             TCGCTTAAGGCTTGT  69 283
 CHQ57_00560 NONE
 CHQ57_00565  114341 ..  114385 + -18.7  -2.98823   TGCCGTGATGAATGT CAGGATAAAAAGAAGGCCGCA TCA TGCGGCCTTCTTTGTTTCCGG TCTCTGTCAGAGCCG 100 33
        lexA  117647 ..  117670 + -12.4  -2.63079   GACTGGATGTAACAG          CACGGCCTCC CTCG GGAGGCCGTC           TCGCTTCTGTACCCC  76 29
 CHQ57_00580  118404 ..  118433 + -14.4  -4.36914   TCCTGGCCCTTGTCT       C-ACAGCCCCACC TTGAT GGTGGGGCTGTTG       TTTTATGACCCAGCC 100 45
 CHQ57_00585 NONE
 CHQ57_00590  120633 ..  120644 +  -5.8  -2.85668   AACCCTCATAACCCA                GCTG GCGC CAGC                 TCTCGTATACGAATA  52 30
        fieF NONE
 CHQ57_00615  124993 ..  125030 +  -4.2  -3.10715   CAGTGTCTCTGATCC  CCTGACCGAGACGATTCG ATGG CCAAGCG-CT-GGTCAGG   TTACCTGATCCTGGG  46 29
 CHQ57_00620  126343 ..  126358 +  -6.1  -2.83449   GTGGTGACTGGATTG              GCAGG GTGTTG CCTGC               TGGTTATGAGGCTCT  51 77
 CHQ57_00625  126787 ..  126809 + -20.6  -4.85782   CTGCAAGATTGAAAA           CGGGCCGCTC CAT GAGCGGCCCG           TTTGTTTTTGGCGGG 100 52
 CHQ57_00640  130678 ..  130709 + -13.8  -3.87075   AGATAGCTATATAAG      AAGAGAAGCCCGGCA TCA TGCCGGGCTTC-CTG      TTTGTGGGGGCTGCT 100 64
 CHQ57_00650  133367 ..  133388 + -10.9  -2.90508   AGTTAGAGCAAAGAC           CTGATACGC CTTG GCGTGTCAG            TGCTTATCTGGCTTA  71 88
 CHQ57_00655  133627 ..  133654 + -12.2  -4.68384   TTGCTAACAAGAATG        CAGACATAAGCA TGCG TGTTTATGTCTG         TTTTCTTCGGTCGAT 100 49
 CHQ57_00660 NONE
         rrf  137042 ..  137054 +  -9.1  -2.62667   AAGAGATTTAGATAA                CGCAC GCA GTGCG                GTCTTTACCGGTTAG  62 101
 CHQ57_00670 NONE
         rrf  137293 ..  137312 +   -15  -4.99134   CACCTATTTAGAAGA            GGCCTCCC ATTC GGGAGGCC             TTTTTGCTTTGGAAT 100 40
 CHQ57_00680  138668 ..  138690 +   -12  -3.73008   GGAAGTTCGTCTCAT           CGGGAGGTGT CAG ACACCTGCCG           TTGTGTGTATTTCCC  88 296
 CHQ57_00685  139758 ..  139785 + -21.4  -4.07535   CACCCGAGTTGAAAA        GAGAGGGAGGCC AGCT GGCCTCCCTCTC         TTGTTTCTCCGGCTT 100 44
 CHQ57_00695  143081 ..  143099 + -11.7   -4.2558   AAAGTAGAAAATAAA             CAGGCCC TTCAT GGGCCTG             TTTTGATCAGAGATG  93 65
 CHQ57_00710  146179 ..  146196 + -12.7  -3.13403   AGAGGACATAAAAAA             GGCCCAC TTCC GTGGGCC              TCTTGCTGAGAGCAG  81 58
 CHQ57_00735  153676 ..  153690 + -11.4  -5.24531   CCCGTGATGTGAAAA               GGAGCC GAT GGCTCC               TTTTTTGTCAGGACT 100 56
 CHQ57_00770  159367 ..  159384 + -11.3  -5.60993   CTCAGGTACGAAACA             GTCTGCC CGCT GGCAGAC              TTTTTTTATCCGCAA 100 47
 CHQ57_00775  160244 ..  160261 + -12.7  -3.08679   GCTAGCAATAAAAAA             GCCTGCC AGCT GGCAGGC              TCTTGCGTGGGCACC  79 71
 CHQ57_00785 NONE
 CHQ57_00790 NONE
 CHQ57_00795  162466 ..  162495 + -11.5  -3.57651   AAATCAGGCATAAAA       TCATCATTCCCGC GAAA GCTGGGATGATGA        TTCTCTCATCTGGCC  85 84
 CHQ57_00805  165095 ..  165124 +  -4.9  -4.26076   CAGCGCGGGGAGTAA       CCGGCCTGGTC TCCCTCTT GAGCAGGCCCG        TTTTGCTCACCCTGA  64 26
 CHQ57_00810  166478 ..  166506 + -23.3   -3.2794   GGGCGTTTGCTAAAA        CAACAACGGGGGC TTG GCCCCCGTTGTTG        TTGATATGGATGGAA 100 58
        mgtA  171749 ..  171772 + -16.8  -5.26316   CCGTGTGAACGCAAA          GAGGGATGGC TCAG GCCATCCCTC           TTTTTTATGGGGTCG 100 115
 CHQ57_00855  178622 ..  178637 +  -6.1  -2.53715   GCCCGGCCCGTAGGC              CCGCA GGGGAA TGCGG               ATTACTCATCATGGA  49 95
        mmsA NONE
 CHQ57_00865 NONE
         ald  182173 ..  182187 +  -8.5  -4.03078   CCGCGATTTCAGGGA               GGGCC GTCAG GGCCC               TTTCTCATATACTGG  77 90
 CHQ57_00875  183292 ..  183315 +  -2.4  -3.82083   GGACTCTGCACGGGC          GC-AAGAGCTG TCC CGCCTCTTAGC          TTTAGGTTGTCGTCC  51 250
 CHQ57_00880  183838 ..  183853 + -11.8  -4.51238   AGCGTCAGACCATGA              GGGGCC CACG GGCCCC               TTTGTGTTTTCTGGC 100 45
 CHQ57_00890 NONE
 CHQ57_00895  186153 ..  186184 + -18.8  -3.61902   TCAGCGTCATGAGAT      GGAGAAGGGCAGCC GCAG GGCTGCCCTTCTCG       TTATCTATGCTGGCG 100 53
 CHQ57_00925 NONE
        dprA NONE
 CHQ57_00935  194900 ..  194914 +  -2.8  -3.53012   GTCGCGCTGGTAGAA               TTCAGG CCA TCTGGA               TTTCAAGGCGCGGCA  49 50
 CHQ57_00940 NONE
        purE  196137 ..  196157 +  -8.9  -4.86133   TCAACCAAGTAATGA            GGTGGCAGC CAG GCTGCCGCA            TTTTTCCTATGTCTA  93 96
 CHQ57_00950 NONE
 CHQ57_00955  197745 ..  197765 +   -14  -4.16284   GAGTGGCTGTGACCC            GAGGGGCC ATGAC GGCCCCTC            TTTATTGGCCGATAT 100 29
 CHQ57_00960 NONE
 CHQ57_00965  199032 ..  199053 + -10.9  -5.72616   AGTCACCTTTATAAC           TCCCCGGTA TTCG TACTGGGGA            TTTTTTTATCTGCAT 100 121
 CHQ57_00975  201251 ..  201271 + -16.9  -4.88293   CCCCATTGATATGAA            CGAGGAGCC ACT GGCTCCTCG            TTTCTTTTTGACCTT 100 58
 CHQ57_00980 NONE
 CHQ57_00985 NONE
        hemN  204517 ..  204528 +  -7.2    -5.626   CCGAAGATAAAAAAA                CCGC CTCG GCGG                 TTTTTTTATCGGGTA 100 56
        typA  212538 ..  212553 + -10.4  -5.61596   ATCGACAGACAGAGA              GAGGCC TGCG GGCCTC               TTTTTTTATGCCCAT 100 50
 CHQ57_01025  213597 ..  213620 + -15.3  -3.95435   TCTTGGTAGCATCGA          CGACCGCCC CTGTGA GGGCGGTCG           TTCTGTTTTGAGAGG 100 63
         dtd  214089 ..  214116 +  -8.3  -3.25942   AGGTGTAGGCGTCAT        GGCCGGGATCC CGCTCC GGCTACCGGCC         TTCATCTGCGGACGT  63 33
 CHQ57_01040  216062 ..  216092 + -19.2  -4.07885   TAAAGCTATCTGAAA       CAAACAAGGCCTCG TGA TGAGGCCTTGTTTG       TTTTACGGAACGCTG 100 38
        idnK NONE
 CHQ57_01070 NONE
 CHQ57_01075  226586 ..  226609 + -12.4  -4.78107   GTGCAGAAAAATCAG          ACAGGCCACC CTTG GGTGGCCTGC           TTTTTGGTCGTCCTA 100 50
 CHQ57_01080  227405 ..  227431 +  -7.9  -3.10343   AGCCTATGTTCTCAT         CCTGCGCGCTG CCAGT CAGCAGGCAGG         TTACCTCGTCGGTCT  56 40
 CHQ57_01095  229697 ..  229717 + -13.3   -4.0162   ATGCTGCGATAAAAA            CAGCCTGCG TAA TGCAGGCTG            TTTGTCATCTGGACC 100 92
 CHQ57_01110 NONE
 CHQ57_01115 NONE
 CHQ57_01120  235002 ..  235024 +   -17  -4.35116   TGTCGGATAGCAAAA           GGCCCTGCCA GAT TGGCGGGGCC           TTTTCATGTGCGGTC 100 53
        bioH NONE
 CHQ57_01140 NONE
 CHQ57_01145  238477 ..  238487 +  -8.2  -4.60487   CTCCGATTTTTCTAT                 CCCG ACC CGGG                 TTTTTGCAACTAATC  88 54
 CHQ57_01150  238874 ..  238909 + -17.8  -3.54741   CTAGCATTTCTCCAC    T-CAGAACCCCCGATGT ACT GCATCGGGGGTTCTGTA    TTTCAACGCATGATG 100 82
 CHQ57_01170 NONE
 CHQ57_01175  245572 ..  245607 + -15.6  -3.33261   CTGGAGTGGATGGAT    TGAGAAAGGGCGTATC CGTG GATACGCCCTTTTGCA     TTATCAGGCTTGCGG 100 23
 CHQ57_01185  247174 ..  247189 +  -2.5  -3.33696   CAGCTGGTGTAGACG              TCCAG ATCAGC CTGGG               TTAATTACGGAAAGA  45 6
 CHQ57_01190 NONE
 CHQ57_01195 NONE
 CHQ57_01200 NONE
 CHQ57_01205 NONE
 CHQ57_01210 NONE
 CHQ57_01215 NONE
 CHQ57_01220 NONE
 CHQ57_01225 NONE
 CHQ57_01230 NONE
        rpsQ  251860 ..  251886 + -18.1  -5.05782   CGGTACTTTGTAGTC         CAAACGGCCCC TTAGC GGGGCCGTTTG         TTTTTTAGGCTACCT 100 42
 CHQ57_01240 NONE
 CHQ57_01245 NONE
 CHQ57_01250 NONE
 CHQ57_01255  253535 ..  253547 +  -4.8  -3.72027   AGGGCGAAATTCCGG                GCCT GAAGA AGGC                TTCTTGGTAACGAAT  58 3
        rpsH NONE
 CHQ57_01265 NONE
 CHQ57_01270  254865 ..  254875 +  -3.2  -3.32963   CCGCTGCTCGTGACG                 CTGG TCT TCAG                 TTCTAAGCTAGGAGT  47 9
 CHQ57_01275 NONE
 CHQ57_01280 NONE
 CHQ57_01285 NONE
 CHQ57_01290 NONE
 CHQ57_01295  257521 ..  257565 + -17.6  -3.18366   TACGGTTAGTACTTG CAACAAATAGTTGTGCTGGCTA ATA TAGCCAGC-CAACT-TTTGTTG TGTATTGGTTGACCG 100 46
 CHQ57_01300 NONE
 CHQ57_01305  258393 ..  258403 +  -6.8  -3.06737   CTCCCAAGAAGCGCC                 GCGT ATA ACGC                 TGTTGCAACTTGGTC  56 18
 CHQ57_01310  259045 ..  259063 + -10.4  -2.59431   ACAGCTGATCGTCGA             GCTTTACT CCA AGTAAAGC             TAGCTTCTAAAGAGA  66 10
 CHQ57_01315 NONE
        rplQ  260513 ..  260529 + -10.8  -5.13722   AGTGATAAAGAAAAA              GCCGGG CTTGT CCCGGC              TTTTCTTTTAATGAA 100 36
 CHQ57_01330  261242 ..  261252 +    -4  -2.94747   CGTCAAACAATTTTG                 TTGA TTT TCAA                 TGTCTGGTGAAGTGA  45 5
 CHQ57_01335  262993 ..  263008 +  -5.4  -3.72576   CAAAGACCTGATGCG              CAAGCG TCAG TGCTTG               TTTGGTGAAAGCCAA  61 96
 CHQ57_01340  263301 ..  263328 + -12.2  -4.65747   TTGCTAACAAGAATG        CAGACATAAGCA TGCG TGTTTATGTCTG         TTTTCTTCAGCCTTG 100 50
 CHQ57_01345 NONE
         rrf  266654 ..  266672 +   -16   -5.4833   ACCCAACACGAAGAA             CCCCGCTC ATC GAGCGGGG             TTTTTTATTGCCTAA 100 41
 CHQ57_01355  268284 ..  268309 +  -5.5  -4.10161   TGACCATCACATAAA         TCTGAAACC AATCAAGA GGTTTCGGA          TTTTCACACATCATA  65 374
 CHQ57_01365  269692 ..  269708 +  -2.1  -3.09505   TGAGCAGCAACAGAA              CGACTAC GCA GGAGCCG              TATTGCATCAGCTAT  42 38
 CHQ57_01375  271930 ..  271951 + -14.5  -3.35813   AGCGTGTTGAGCAAC           GAAGAGGCC TGAG GGCCTCTTC            TTCATTCAGCTGGCC 100 14
 CHQ57_01410  278409 ..  278436 +  -6.2  -3.42503   GCTGATCAAATCAGA        CGGATCCC-GCAG GAT CCGCCGGGATCAG        TTGTCGATATTGGGG  58 144
 CHQ57_01425 NONE
 CHQ57_01430 NONE
 CHQ57_01435  282325 ..  282344 +   -15  -5.24129   TTCCAACGCCTTTTA            GCCGGTGC AACT GCACCGGC             TTTTTTGTGCCCGGG 100 60
        recC NONE
        recB NONE
        recD  291725 ..  291737 +  -4.1  -3.90901   TACAGTGTATTTTTC                TGCTG TGT CAGTA                TTGTATTTGCTTGGT  58 151
 CHQ57_01455  292551 ..  292580 +  -8.6  -2.79878   CTTTCCCCTCATTTC       CACCCTTTCTCCC GCAAG GGGAG-AAGGGAG       ATTTGGCTCCGTGGC  60 134
 CHQ57_01460  293322 ..  293332 +  -3.2  -3.72576   AATAAGCGAAGCGTA                 TTGC ACA GCGA                 TTTGATGCCCACCCA  53 36
 CHQ57_01465  294626 ..  294640 +  -5.6  -3.21218   GTCTCTAAAAATGAG               GGGATC TCT GAGCCC               TTCATCCTCAGCCCT  52 41
 CHQ57_01475  296635 ..  296653 +  -5.9  -3.78597   CGAAACCGACTTCCA             GGTTGGG GTGAA CCCGGCC             TTTCGCTTCGTCGAT  60 468
 CHQ57_01495  300863 ..  300884 +  -9.4  -3.41528   AAGGGGCTGTTTTCA           CCGGTTGC CCGGGT GCGACCGG            TTGTCGGATTTCTCT  69 56
 CHQ57_01500  301444 ..  301459 + -11.8   -4.7497   GACGTGCATGAAAAA              GGGGCC TGAT GGCCCC               TTTTTGCTGGCTGAC 100 49
 CHQ57_01525  305997 ..  306027 +  -6.1  -2.63348   GGCCCAAGGGGCTCA      CCGGCCAG-ATCAT ACTG GTGGCGCTGGCCGG       GTTGGTGTTGATCCA  50 79
 CHQ57_01535  308926 ..  308954 + -13.7  -3.15758   AAAAAGGGGAGAAAT        AGGCCGCCGCCCG GGA TGGGCGGCGGCGA        TTCATCAGAAGTTGT  89 24
 CHQ57_01560  313992 ..  314012 + -12.6  -4.89567   TGGAGCCAGTATCAA            GCCAGCCT TTCAC AGGCTGGC            TTTTATGTTTTCGCC 100 65
 CHQ57_01575 NONE
 CHQ57_01580  319669 ..  319689 + -16.9  -5.31877   ACAGCAGTCATGAGA            CAAGGGGCC CTG GGCCCCTTG            TTTTTTATGGTGGAT 100 43
 CHQ57_01585  321738 ..  321748 +  -2.6   -4.1157   TTTAATCTGAAGTTA                 TTTA AAC TAAA                 TTATTGTTATTAATG  56 282
 CHQ57_01595  323659 ..  323680 +  -7.2  -4.62471   CTAAGCACGTCTCTT           TGGCCCGA CACTGT TCGGGCCC            TTTTGTGTCTGCGTT  81 417
 CHQ57_01605 NONE
 CHQ57_01610  327415 ..  327434 +   -15  -4.62475   CAACACCATAAAGAA            CGGGAGGC AACA GCCTCCCG             TTTTCATTTCTGCCT 100 45
        metF  329512 ..  329532 + -14.1  -5.52384   GCAGGCACAAAAAAA            GCCAATGAG TTG CTCATTGGC            TTTTTTTCATAGCGG 100 52
 CHQ57_01625  331120 ..  331138 +  -8.8  -2.76453   GAGGGCATCGATGAA             CAAGGCGC TCA GCTCCTTG             TAGTTGACGTTGTCA  57 322
 CHQ57_01640  334123 ..  334137 +  -2.1  -3.28712   CTGCCGCTATGACCA              G-TGCG AACG CGCAGC               TTATCCGGCGCCCCA  44 206
 CHQ57_01650  337297 ..  337312 +  -5.4  -3.72576   CAAAGACCTGATGCG              CAAGCG TCAG TGCTTG               TTTGGTGAAAGCCAA  61 96
 CHQ57_01655  337520 ..  337548 + -14.1  -4.65747   TTGCTAACAAGAATG        CAGACATAAGCAT TAC ATGTTTATGTCTG        TTTTCTTCGGCCTTG 100 50
 CHQ57_01660 NONE
         rrf  340902 ..  340915 +  -3.8  -3.28712   CACGACACTGGCCGA               GAGG ATGACA CCTC                TTATAAGCGGCAAAA  49 67
 CHQ57_01670  341045 ..  341066 + -15.9   -5.0925   CGCCACTAATTCGAA           GGCCTTCCC AATC GGGAAGGCC            TTTTTGCTTTTGCGA 100 36
 CHQ57_01680  343125 ..  343140 + -11.8  -4.76041   TCCGGTTATAGCGAA              GGGCCC TGCG GGGCCC               TTTTTCATGGCTGTG 100 45
 CHQ57_01685  344397 ..  344411 +  -5.6  -2.57944   CCCGCCCTGCGTCGC               GGCTGC TAA GGAGCC               CTTACTCTCATGCTA  47 17
        dhaL NONE
 CHQ57_01695  345760 ..  345774 +  -7.1  -2.70932   GCAGCGGAACGTTTC               GGCGA CTGAC TCGCC               TGCTTCAAGGCGCGG  53 17
        gldA  347017 ..  347048 + -22.4  -3.57144   GCTGCCCTTGCCATA      TAACACGGCCCCGC AACT GCGGGGCCGTGTTG       TTTGAGGCTGGGCGG 100 51
 CHQ57_01710  350465 ..  350485 + -14.7    -4.053   TCGCCAAAAACAGAA            GAGCTGCCC GAT GGGCGGCTC            TTTGTATCAGCTAAT 100 432
 CHQ57_01725  353573 ..  353594 + -15.9  -3.91911   TGCGCTGCAATGAAA           CAGGCCACC TTCG GGTGGCCTG            TTTCATTGCAATCAC 100 44
 CHQ57_01750 NONE
 CHQ57_01755  359416 ..  359447 + -13.9  -5.17507   GCGCACTGATTGGCC      TAATGCCAGTCAG TTAAGC CTGACTGGCATTG       TTTTTATTGGCTTTT 100 103
 CHQ57_01775 NONE
 CHQ57_01780  364470 ..  364493 +  -8.8   -3.2794   CTTCCTGAACCATGA          CAGTGCCGGC ATCA GTCGGTGCTG           TTGATATCGGTGCCA  65 50
 CHQ57_01795 NONE
        ftsE NONE
 CHQ57_01805  369399 ..  369421 +  -7.7  -5.52909   AGCATGCTACTTTTC           GGGGGTC CTTGATTGT GACCCCC           TTTTTTTGACTGTTC 100 295
        rpoH  370439 ..  370485 + -20.5  -2.94595   ATGGAGGCCTGATGC CTC-CCAAACAAAAACAGGGCC TGAT GGCCCTGTTTTTGTTTCGCGAG TATCTGGTCGGCCTT 100 29
 CHQ57_01815 NONE
        hutC  371963 ..  371980 + -12.7  -5.37345   TATTATTTTGACAGA             GCCCACC TCAT GGTGGGC              TTTTTTGTGCTTAAA 100 52
 CHQ57_01825 NONE
 CHQ57_01830  374257 ..  374294 +  -5.5  -2.56596   TGGTCCATCAGTTAA   CCA-AGTAGCGACCTGCC GAG GGCAGGTCGCCATGCTGC   TGCATTGATAAAACA  47 18
 CHQ57_01835 NONE
        hutH  377582 ..  377600 +   -16  -3.65986   CGGCTCATAGCAAAA             GACCGCCC ATC GGGCGGTC             TTGTCGTTTCTGGTG 100 50
 CHQ57_01850  380081 ..  380100 +  -4.9  -4.87665   TATGAGTGTTTCTTT            CGGTCCC CTTAGT GGGACCA             TTTTTCTGCCTGAAA  75 448
 CHQ57_01855  382394 ..  382428 +  -8.5  -2.87931   AACAGGCCCCACATC     GCCTTGCCGCTGTAG ATGGG TTCCAGCGGCAGGCC     TGTCTCGGCGCTGAA  55 169
 CHQ57_01865 NONE
 CHQ57_01870 NONE
 CHQ57_01875 NONE
 CHQ57_01880  385708 ..  385736 + -12.3   -2.9665   AGGTCCGTATCTGAA        CGGGCCCTGCCCG GGA TGGGCAGGGCAAG        GTTTGTCGAGTTTAA  78 27
 CHQ57_01885  387502 ..  387519 +  -3.3  -2.78216   CCATGTGCCCTCTTG             CCCTGCG TCAC TGCAGGC              TGCTTGCTCGGGATG  41 71
 CHQ57_01890  388484 ..  388501 +  -6.2  -2.87344   GAGCAGCGTCAGCAG             GGCGGC GAGGGG GCCGTC              TATGTGCCGCCCGTG  52 70
 CHQ57_01895  389485 ..  389512 +  -6.1  -3.52177   TGAACAGCGAATTGC        CCAGCTCGCCC CCTGAC GGGCGGGACGG         TTAACTTTTTTGGAG  58 10
 CHQ57_01900 NONE
 CHQ57_01905 NONE
 CHQ57_01910  393143 ..  393162 +  -2.1  -3.61398   AATGATTTTTTTATA            TCTGCAT GAAATA ATGCGGG             TTATTACGGAGGGAC  49 67
 CHQ57_01915 NONE
 CHQ57_01920  394320 ..  394337 + -12.7  -4.46775   ATACTGTTAATGCAA             GCGAGGC TTCG GCCTCGC              TTTCTCTTTTCCATG 100 40
 CHQ57_01925 NONE
 CHQ57_01930  395403 ..  395414 +  -4.4   -2.7752   CTATCGGGGGAACTA                CTGA TGGG TCAG                 CTTTACGATCGTGTC  46 22
 CHQ57_01935 NONE
 CHQ57_01940 NONE
 CHQ57_01945  400524 ..  400545 +  -7.3  -4.83615   GCGTTTGTCGGCCTG           TGCGAGTGA GTGA TGACTCGCA            TTTTTGTCGCGACTG  85 95
 CHQ57_01950  401706 ..  401727 +  -7.2  -5.00616   TACGAATAAGACCCA           AAGCCGGC CAGCGC GCCGGCTC            TTTTTTGACGACCCA  86 32
 CHQ57_01955 NONE
        mreD NONE
 CHQ57_01965  403811 ..  403831 +  -3.2  -3.41878   GGTCCGATAATTTTT           CGTCAGCTG TGCT CTGCTG-CG            TTCTCCCTTGCGCGC  47 31
 CHQ57_01970 NONE
 CHQ57_01975 NONE
 CHQ57_01980 NONE
 CHQ57_01985  410524 ..  410549 +  -6.1  -3.80733   CACGCCCCGCGTGCT         GA-CCCAGGCCG CTA TGGCATGGGATC         TTATTGTGAAATCCC  63 47
 CHQ57_01990  412058 ..  412088 + -21.3  -4.21194   AACCCACTATGTTGT       CAATGACCCCGGC CATGT GCCGGGGTCATTG       TTTTGGGTAGTGCAA 100 48
 CHQ57_02010  415811 ..  415832 +  -2.1  -4.00038   CCCCCATCAGACCGT           AGGGGTAGC CGGT GCCATCCCA            TTTCTCGTGGTGGTA  57 270
 CHQ57_02040  423033 ..  423055 + -13.4  -4.76041   AACCGCTATAAAAAA           GCCGGATCCT GTC AGGACCCGGC           TTTTTAGTGAGTCTG 100 48
 CHQ57_02050  424415 ..  424431 + -15.1  -4.75404   GTTCATATTGTCACC              GGGCCGC AGT GCGGCCC              TTTTTCATGGGGTTT 100 45
 CHQ57_02055  425125 ..  425144 +  -7.8  -2.91582   GAGTTGAAACAAAGA            GGCCGC CGTGAGTT GCGGCC             TGTCTGCATCGGGTG  58 117
 CHQ57_02070  431059 ..  431100 + -10.8  -3.64103   TTTGACGAGAAACGG CGGCATCCTTGGGCTGGT GGACAG ACCAGCTTAGGGCCGCCG  TTTGACATATCGGTG  81 72
 CHQ57_02075  432178 ..  432203 + -15.5  -3.92542   GCATAGCGGTATAAA         TACAAGGCGCC CTCG GGCGCCTTGTG          TTGTTTGCGAGTCGG 100 55
 CHQ57_02090  434733 ..  434771 + -14.7  -3.54475   AAAATTGCCCGCCCA   GGCCCATAGTTAAACCT CATCA GGGTTTGACCATGGGCC   TTCTGTCATGACACG 100 66
 CHQ57_02095  435312 ..  435327 +    -4  -3.71888   TTGCTAAATTAGAGT              TCTCTT TTTT AAGAGG               TTCTTAAATATGATT  56 79
 CHQ57_02100  437063 ..  437079 + -15.1  -4.09628   GTTGCAGCAAGAGAA              CCGGGCC CAT GGCCCGG              TTGTTGTTTGCACTG 100 50
 CHQ57_02105 NONE
 CHQ57_02110 NONE
 CHQ57_02115 NONE
        thiS NONE
 CHQ57_02125 NONE
 CHQ57_02130  444058 ..  444076 + -11.6  -3.78022   GTTTTTGGGCCGATA             GGGGCGGC CAC GCCCCCCC             TTTGCTGGGTCTAGC  88 25
 CHQ57_02135 NONE
 CHQ57_02140  445222 ..  445250 +  -5.9  -4.67556   AACAGCGTTAACGTA        GGGTGCAATAAGC GGA GCGCATTGCACCA        TTTTTGGCATCTTGT  77 40
 CHQ57_02145  446008 ..  446021 +  -2.3  -3.76952   GAAAATGCTGCGAAG               GCTGC GGCA GCACC                TTTAAATTGAGTGAA  51 444
 CHQ57_02160  448422 ..  448451 +  -9.3  -3.96216   CTAAACCATGACAAA       GAGGCTTGATTGC CGTC GCATTCAACCCTC        TTGTTTCCATGACCC  78 37
 CHQ57_02175  451321 ..  451342 + -17.3  -4.81551   CATGAAACAACAAAA           GGGGCGACC ACCT GGTCGCCCC            TTTTTCGTCTGCGTG 100 55
 CHQ57_02185  452974 ..  452997 +  -3.9  -4.13767   CCGCGCTGGCGCCCA          TG-GCGAGCA CCCGC TGCTCGTGCA          TTTTCGCGTAGGCGA  59 130
 CHQ57_02195  453674 ..  453688 +  -5.6  -3.36273   CGAGCCACACTCAGC               CGCCAT CGA ACGGCG               TTAGTCTTCCGCCGA  54 7
        glpX  462473 ..  462495 + -16.3  -5.24796   GCTGCTGTTGAAAAA           GCCCGACGG CTGTT CCGTCGGGC           TTTTTGTTGTCTGGG 100 50
 CHQ57_02240  462890 ..  462913 + -18.2  -4.69664   GCAGATCAGAAAAAA          GAGAGGCCGC AATC GCGGCCTCTC           TTTTTGGGTGGTATC 100 64
 CHQ57_02265  469757 ..  469776 +   -15  -4.33182   AAATCGAATATAAAG            CGGCCTGC AGAA GCAGGCCG             TTGTTTTATCCGTCG 100 101
        lysA  472304 ..  472326 +  -7.6  -3.06708   ACAGGAAGGCACCAC           GGCGACTGGA TTT TCCAGACGCG           TCTCTGTGTGCGTTG  59 43
 CHQ57_02285  473343 ..  473355 +  -6.2  -5.00895   TGCGCGATAATGTCA                GGGC CCAGT GCCC                TTTTTCTGTAATGGA  83 69
 CHQ57_02290 NONE
        xerC NONE
 CHQ57_02300  476087 ..  476116 +  -7.7  -2.58249   TTTGAGCTGGGCAAG       CTCGCCCGGATCG CCAT CGAACAGGGCCAG        GTTATCCAGCCTGTG  52 262
 CHQ57_02315  478539 ..  478563 +  -7.7  -2.73007   CGACCAGCCCGTCTT          CGGCATGGGCC AGC GGCTCAAGCCC          CTTTGCCAGCGTCTT  53 189
 CHQ57_02335 NONE
 CHQ57_02340 NONE
 CHQ57_02345  485447 ..  485476 +    -7  -2.51133   CTGGATTGAAGCGTA       CGCCGATGCCAG ATAGCG CGGGTAGCGGCG        GTTGATGCCTAGCTG  52 32
 CHQ57_02360  489124 ..  489135 +  -7.2  -3.14344   AGGGTGAAGGCCTTG                GGCC TGTG GGCC                 TTGATGGCGGCCATG  54 114
 CHQ57_02370  490214 ..  490249 + -22.2  -3.17194   ATGGCGTGTCTCGCC    CAATATAAAACCCGCC AACT GGCGGGTTTTATATTG     TTGCGTTGGCGGGGT 100 40
 CHQ57_02380  492871 ..  492896 +  -6.8  -5.00616   ACCGTCGCCTGACAA         GGCTTGCCAC ATCTTG GTCGCAGGCC          TTTTTTGCGGCCAGA  86 151
 CHQ57_02385  494936 ..  494949 +  -5.2  -2.90615   AGTCAACTATCGCTT               CGCC TCTGCC GGCG                TGCTTTGAACCGAGT  49 4
 CHQ57_02390  496739 ..  496763 + -18.7   -3.4759   GCTGGCGAGTAACAA          CAAGGGCTCCA GTT TGGAGCCCTTG          TTCATTGTGGTGGGT 100 42
 CHQ57_02405  499506 ..  499516 +  -5.4  -3.30243   TGGCAAGGCGGGCTG                 CTCA GGA TGAG                 TTGTGAAGACTGCCT  54 16
 CHQ57_02410 NONE
 CHQ57_02415  500585 ..  500604 + -13.6  -4.05788   TTGACGAAACAAGAA            GAGGCACC CAAG GGTGCCTC             TTTGCTTTGAAGAGC 100 50
 CHQ57_02425  503204 ..  503228 +  -7.1  -4.10164   GCTGATGTGTGAAAA          TCCGAAACCTG TCA TGGGTTCCGGA          TTTATGTGATGGTCA  70 208
 CHQ57_02435  505601 ..  505621 +  -3.1  -3.32647   AGCGTCCAGCAGCAG            GGCAAGCGC TAT GTGCCTGAC            TTGATGTCCTTGCAG  47 48
 CHQ57_02440 NONE
 CHQ57_02445  506852 ..  506864 +  -3.3  -3.61398   AGTTTGTGCCAGACC                CCGAT GCC ACCGG                TTATTGAGGAGAGCA  51 6
 CHQ57_02450 NONE
 CHQ57_02455 NONE
 CHQ57_02460  508692 ..  508703 +  -7.2  -3.85817   TCTGGATCACCCTTT                CCCG CCGT CGGG                 TTTGTCCAAGGCCCT  68 181
        parE  510664 ..  510692 +    -8  -2.72144   GCCATCATCTAAGCC        GTCGGCTGGCCC TGTGC GGGCCAGCAAGC        ATTTAGCCGGAGTCG  57 29
        parC  513051 ..  513066 + -11.8  -2.72263   GTAATTAATATAGAA              GGGCGC GAAA GCGCCC               GTTTAAAGGCACTAT  73 37
 CHQ57_02475  514139 ..  514149 +  -6.8  -2.75708   TAAGTAGCAAAAATC                 TGGG ACA CCCA                 CCTTTTTTGACCGCG  53 34
 CHQ57_02480  515881 ..  515891 +  -3.2   -4.8667   TATATTGTTTCAGCA                 GGCT TTT AGTC                 TTTTTATAAGATATG  71 303
 CHQ57_02490  517721 ..  517738 + -14.1  -3.41051   AGGTTGATATAACGA             CGCCCGG CGGG CCGGGCG              TTGTGGTGCGACTGG  95 77
 CHQ57_02540  525903 ..  525919 + -13.7   -5.5604   GGAAGACGACATAGA              GGGAGCC GCT GGCTCCC              TTTTTTGTTGGTTAA 100 49
        pspA NONE
 CHQ57_02550 NONE
 CHQ57_02555  527253 ..  527272 + -13.6  -5.67967   ATCGAATCCTTCCTT            GGCCACTG CTTG CAGTGGCC             TTTTTTTGTGGTGCT 100 52
 CHQ57_02565  528888 ..  528914 +  -2.9  -3.10545   AGCATGTAGGCGAGT        CCGGCCAGT-GC CAGG GCGACTGCCAGG         TGCTTTTGCACTGTG  41 503
 CHQ57_02575  529985 ..  530003 +  -2.2  -4.30014   CTGCTTTGATTCAGG             CCGCCGGT TCT GCCAGGGG             TTTTGGCTTGCTGCG  60 32
 CHQ57_02585  531826 ..  531851 + -10.5  -3.94188   GCCTTGCAAACAAAA         GCCCAGCCCTGA TGC TCAGG-TTGGGC         TTGTTTGAACTGGCT  86 14
 CHQ57_02600  534518 ..  534550 +  -6.1  -2.50816   TGCAGCAACTGGCCG      ACGCCTTCGCCCAGT GCC GCTGAGCCAGGGCGG      GTTGATCGATAGGGC  49 3
 CHQ57_02605  535324 ..  535366 +  -6.9  -3.62522   CTCCTCGAAATATTT GGCTGCGCCCGGGTGCTGTTC GAT GCTCAGCACC-GGGC-CTGTC TTGTTGCGCGCCTTG  60 59
 CHQ57_02620  539184 ..  539219 + -17.8  -3.54741   CTAGCATTTCTCCAC    T-CAGAACCCCCGATGT ACT GCATCGGGGGTTCTGTA    TTTCAACGCATGATG 100 90
 CHQ57_02635  542246 ..  542260 + -11.4  -5.61596   TCTCCATAGAAAAAA               GCTCCC GTC GGGAGC               TTTTTTTATGCCCGT 100 67
 CHQ57_02645 NONE
 CHQ57_02650  545092 ..  545111 + -13.6  -4.58424   TCGTGCAAAGTAAAA            GGGGAACC GTGA GGTTCCCC             TTTTGTATGCTGCTG 100 57
 CHQ57_02660 NONE
 CHQ57_02665  548907 ..  548923 +  -7.2  -3.43049   TTTAGTTGGCCGCAT              CCCTGC CGCCT GCGGGG              TTGATTGCCTTGTTC  61 50
        arsA  550784 ..  550800 +  -4.4  -3.72642   CCAAGGCGCAACCAA             CAGAGGC ATTT GCC-CTG              TTTGAGTCCTTCATT  58 64
        arsB NONE
        arsC  552415 ..  552438 +  -7.4  -3.35996   ATGAGCTCTACGGTT          GGCTGCTCAGG TAA TC-GGGCAGCC          TTGTAGATACCGATG  62 94
 CHQ57_02710  559427 ..  559437 +  -8.2  -2.90496   ATTCGGTTTTGACCC                 GGCC ACC GGCC                 TGATTTAAGAAAGGA  61 7
        argB NONE
 CHQ57_02720 NONE
 CHQ57_02725  562510 ..  562528 +   -16  -4.37886   TCCGCTGATACTGGT             GAGGGGGC ATG GCCCCCTC             TTTTATCAGCCCTCC 100 52
        argH  564088 ..  564122 +   -18  -3.69323   ATTGATTCCAATGAG     CACAAGACGGCAACCC CAG GGGTTGCCGTTTTTTG     TTTGCCTGATGATGA 100 51
 CHQ57_02740 NONE
 CHQ57_02745  565877 ..  565896 +  -4.2  -2.54387   TGATGTTTCAGCAGG            GGGTGATC TTAT GATCGCCA             TGCATTACAGATTTA  42 12
 CHQ57_02750  566446 ..  566502 +  -2.4  -3.61764   GGGGATCCATGTCCT CACTCGTCATTTCACCTGCATACGGCGT TAA ACCTGGTGTGCAG-TGAAGTGCTG-GTG TTTAGCGCTTGATGG  49 60
 CHQ57_02755  567310 ..  567349 + -16.1  -4.68908   TATCCCGTCTGGTCT  CA-ATAAAAACGGCAACC CCCGA GGTTGCCGTTTTTATGTG  TTTATTTTCAATCAG 100 43
 CHQ57_02785  571875 ..  571897 +  -6.9  -3.45386   TGACCAGATTTACCA          GCCGGGCGGC TAAG GCC-CCCTGC           TTCCTTGTGGCATGT  61 13
 CHQ57_02790  572639 ..  572662 + -11.2  -6.07969   ACGCTCCATTTTTTA          GGTCTTTTAT TTAT ATAAAAGACC           TTTTTTTTCATTTTA 100 133
        cysT NONE
        cysW  574542 ..  574587 +  -2.2  -3.28912   CAAGCCCCACTGATA TTGCGAGAGAGGCCCGGCTG CGCGAC CTGCCGGGCCCCATACCCCA TTGATCTCGATATAA  45 28
 CHQ57_02805  575674 ..  575687 +  -2.3  -3.72695   GCAGGCCCAGCTCTA               TCCGG ACTA CCAGA                TTTGATGGCCAGGGT  51 7
         cbl  576848 ..  576868 + -18.3  -4.63218   CCAGACGATGTGAAA            CGGGGAGCC AGT GGCTCCCCG            TTTTGTTGGCGGCGA 100 47
 CHQ57_02815 NONE
 CHQ57_02820  578942 ..  578954 +  -4.7  -2.83715   TGGCTCCTGATGAGC                GAGCG GAG CGCCC                TGTCATCGTCGTCAC  46 57
 CHQ57_02825 NONE
 CHQ57_02830 NONE
 CHQ57_02835 NONE
 CHQ57_02840  581761 ..  581781 + -18.3  -4.13995   CCAGAGTAGGTAAAA            CGGGGAGCC ACT GGCTCCCCG            TTTAGTTTATGACGA 100 32
 CHQ57_02855  587490 ..  587513 + -14.6  -4.62441   ACCCCGCCTGCAAAA          GAGCCCTGCC AATT GGCAGGGTTC           TTTCTTTATATGGCG 100 45
        pgaA  592771 ..  592791 +  -4.7  -2.53759   CGCCAATCTGCAATG            GAGTTTCAT GTG ATGAGACGC            TGGCTTGCCCCTCTT  44 13
        pgaB NONE
        pgaC NONE
 CHQ57_02880  596299 ..  596316 + -12.7  -5.10064   AAAGCCGGTTAACCA             TGGGGCC ATCC GGCCCCA              TTTTTGTATCTTCCC 100 29
 CHQ57_02885  597877 ..  597887 +  -5.4   -4.2558   CCTGCAGATCCGGGA                 TCAG CTC CTGA                 TTTTCGTAGAAGCTG  68 121
 CHQ57_02895  601666 ..  601690 + -14.2  -2.70354   CCTGATTGCCTCTCT          GCGCGCCCCC TTCAT GGGGGCGCAC          TGCATTTATGAACCC  85 36
 CHQ57_02900 NONE
 CHQ57_02905  602869 ..  602901 +   -15  -3.40071   AGGTCCGTGATCTGG      CATGGTGGATGTCC TTTAT GGATATCCGCCATG      TTGTGAATGTCACTT 100 39
 CHQ57_02910 NONE
 CHQ57_02915  605439 ..  605458 +  -3.5  -2.70232   CAAAGCAATTTGATG            GGATGCT TTTGCC AGCACCC             TGCTCTGATGTTGAG  43 71
 CHQ57_02920  605906 ..  605923 +  -7.7  -2.69151   ACCCCATCTATACCA             GGAAGCC CTGA GGCTTTC              TCCTCTCTGCGAGCC  56 15
 CHQ57_02940  609852 ..  609871 + -13.6  -2.79183   AAGACAGGATGTGAA            GAAGGGGC CAAG GCCCCTTC             TGTGGTGCGGGTCAG  85 64
 CHQ57_02950  614684 ..  614709 + -16.1  -5.27938   GAGAGAGTAAGCAAA         GCGCGACTGCC AACC GGCAGCCGCGC          TTTTTCTTTGCAGGT 100 115
 CHQ57_02960  617997 ..  618023 + -19.5  -5.96219   TTCCGAGCGCAAAAA         TCCCGCCACGG TATGC CCGTGGCGGGA         TTTTTTTTATGGATG 100 43
 CHQ57_02970 NONE
 CHQ57_02975  621826 ..  621841 + -11.8  -5.79595   TCGGGCAAACGCAAA              GGGCCC CGGC GGGCCC               TTTTTTCTTTTCCAC 100 44
 CHQ57_03010  629099 ..  629111 +  -4.9  -3.92659   CAAAAAACCTCTCTT                TAAAG AGG CTTTA                TTTGGCTTTTCAACC  60 55
 CHQ57_03015 NONE
 CHQ57_03020  631605 ..  631623 +   -16  -3.60098   GCTGATCCTCTTTTG             GCCGGTGC CTG GCACCGGC             TTTACCCTGCCCCGT 100 36
 CHQ57_03025  632399 ..  632415 +  -6.5  -3.24232   ACCGACTGCGCCACC              TGTGCGT ATG ACGCTCA              TCTGTTTAAAAGGAG  54 54
 CHQ57_03030  632984 ..  633013 +    -7  -3.89956   TAGGTCTACCGCGCT       GCGGGCCGCTCT GGAATA ATGGAGGCCCGC        TTTCCTGTCTGGTAA  68 38
 CHQ57_03035  634115 ..  634146 +  -2.8   -4.1899   GGCGGGCTTGCAGTA      GTGGGGCGGGGA GAGCAGAA TCCGCGCCCATC       TTTTGCCTCACCTGA  60 151
 CHQ57_03040  635400 ..  635415 + -11.8  -5.05301   CACCTTCCGGTCAGA              GCCCGC TTCG GCGGGC               TTTTTGTGGTTGTTT 100 57
 CHQ57_03055  637282 ..  637307 + -15.5  -4.86731   ATTGACTCCATGGTG         GGGCTGGATAG GATT CTATCCGGCCC          TTTTGTTTGAACGGC 100 125
 CHQ57_03060 NONE
 CHQ57_03065  639982 ..  640006 +  -9.9  -2.74537   AATTCGACTTGTAAT          CAGATGGGGCC AAG GGCCCCATCCA          CTTCTGTGGTCTCAT  67 27
 CHQ57_03070 NONE
 CHQ57_03075  642759 ..  642779 +  -3.3  -2.57192   AGTGCAGTGAACAAC            TTGATATCG TTA TGAAATCAA            TGAATTGAATTCACT  40 31
 CHQ57_03080  643780 ..  643797 + -12.7   -4.3208   CGCAGAAAACAAAAA             TCCCGGC CTTG GCCGGGA              TTTTGCGTTCTGGCG 100 58
 CHQ57_03090 NONE
 CHQ57_03095 NONE
 CHQ57_03100  646743 ..  646756 +  -3.1  -2.56046   CTGCAACCGACCGTT               TTCAG TCAG CTGAG                TGAATTCGGGTTTAA  40 88
        artM  647478 ..  647489 +  -4.4   -3.5812   TCCAGGCCTGAGCTC                GGTA GAAC TACC                 TCTTTGTGGTAGGTA  55 30
 CHQ57_03110  648650 ..  648667 + -12.7  -4.08144   CATGGCTGACAACAA             GGGGAGC TTCG GCTCCCC              TTTGTCATTGCTGCA  95 45
 CHQ57_03115  649726 ..  649759 + -11.7  -2.93338   TTCACCTGTGGGTCC     GGATCCGGCC-GCCGT GCC ATGACAGGCCGGGTCC     TCATTGCTTTATATG  75 61
 CHQ57_03125  651575 ..  651591 + -13.7   -5.1615   GAGTGAGATAAAAAA              GGCTGCC ATC GGCAGCC              TTTTTTCAATCTTCG 100 35
 CHQ57_03140  655410 ..  655427 + -11.3  -4.72272   CTTGTCAGGCAGAAA             GGCTCAC CGAG GTGAGCC              TTTTTCATGCCAACC 100 49
 CHQ57_03145  655797 ..  655810 +  -3.7  -3.14132   AAGCTGATCAAAGAC               GCTGC CAAA GCTGC                TTAATCAGCCCAACG  47 8
        rimM  656350 ..  656360 +  -3.2  -3.54424   AAGTTGATTGGGATC                 CTGG TTT CTAG                 TTTCCCGCGGTAACA  49 15
        trmD NONE
 CHQ57_03160  657579 ..  657597 +   -16  -5.37043   GACAGGTAGTGAAAA             GGCTCGCC AAT GGCGAGCC             TTTTTTGTGTCCGCT 100 80
 CHQ57_03175  660050 ..  660069 +  -7.8  -3.55801   GAAAGCATGGCCGAA            GCCAACAC TCTG GAGTTGGC             TTTGCAGGCATTGGT  64 80
 CHQ57_03185 NONE
 CHQ57_03190  663988 ..  664017 + -19.5  -3.25719   GTCGGAGAAGCTCAA       CAATAAAGGCGCC AAGA GGCGCCTTTATTG        TTCGTACTATACTCA 100 41
        nhaA  665366 ..  665384 +  -3.2  -3.86431   AGACTTTGGAGGGAT             TATGAGAA AGG TTCTGATA             TTGTGTTCTCTTCTT  55 21
 CHQ57_03200 NONE
 CHQ57_03205  666675 ..  666686 +  -2.2  -3.10597   TGCCACGATTCAACC                GGCA ACCC TGTC                 ATTTTAAATCGACGG  42 7
 CHQ57_03210  667050 ..  667065 +  -7.5  -5.48303   CAGATAAATAAAAAA              CCGGC ACTAAG GCCGG               TTTTTTTAGCGTTAT 100 30
        ribF NONE
 CHQ57_03230 NONE
 CHQ57_03235 NONE
 CHQ57_03240 NONE
 CHQ57_03245  674996 ..  675015 + -13.6  -5.14563   TCCTTTAGAAGAGGG            TGCCGGCT CTGG AGCCGGCA             TTTTTTCATGGAGAG 100 33
 CHQ57_03265  678592 ..  678612 +  -6.9  -3.09516   GGATAGCAGCGACAG            TACCAACAA CGA TTGTTGGGA            TTGAGTGATGAGACG  56 1
        pilV NONE
 CHQ57_03275 NONE
 CHQ57_03280 NONE
 CHQ57_03285 NONE
 CHQ57_03290  684864 ..  684874 +  -5.4  -2.90227   AACGCAGATGTTTCA                 TGAG GCG CTCA                 CTTTCATAATTGGCG  48 391
 CHQ57_03300 NONE
 CHQ57_03305 NONE
 CHQ57_03310  687749 ..  687762 +  -8.1  -3.40522   GCAAGGATCAGCTCT               CCAGC GGGG GCTGG                TTCTGGTAACCAAAT  62 3
 CHQ57_03315  688319 ..  688347 + -16.1    -3.494   TGCATGGCAAAAATG        AAAAAGGCCGGTC ATT GACCGGCCTTTTG        TTGTCTGGAGGATTC 100 45
         rnr NONE
 CHQ57_03330 NONE
 CHQ57_03335  693249 ..  693264 +  -3.2  -3.91897   TGCCTGCGCCCGCGC              GGCTGGC TAT GCT-GCC              TTTCTCGATGAGCAA  55 41
 CHQ57_03340  694015 ..  694039 +  -5.7  -3.35438   CGCCATCATCACTCT         GGTACTGGGC AATCTG GCCCAG-GCC          TTCTCCGATGTGCTG  54 302
 CHQ57_03350  695800 ..  695828 + -18.9  -3.64822   CCTGATCCCTGGCTG        CATCAGACCGGGC GCC GCCCGGCCTGATG        TTTGACTCAAGGGGT 100 36
 CHQ57_03365 NONE
        rpsR NONE
 CHQ57_03375  699423 ..  699440 + -14.1  -5.79595   GCTGTTGCAAAAAAA             CCCGCGC ATTT GCGCGGG              TTTTTTATTTTGGGA 100 50
 CHQ57_03380  700261 ..  700295 +  -4.3  -3.97139   AATAAGCACTGGGGC    CAGAAG-CCC-CTGCTG CAT CAGGAGAGGGACTTCAG    TTCTTCTTGCCGTTG  60 44
 CHQ57_03395  702232 ..  702251 + -10.7  -4.17762   AGCCGGTTGACATCA            GGGCCAC CTCTGA GTGGCCC             TTCTTTTGCGACGTG  91 31
 CHQ57_03405  703502 ..  703534 +  -3.4   -3.7829   TGATGGCGGCCGTGC     CCGATGGTCGACTGGG TCA CCCAG-CG-TCGTCAG     TTTGCTGCCTATGGT  53 38
 CHQ57_03410 NONE
 CHQ57_03415  706826 ..  706841 +  -6.8  -3.15861   CATCTATCCGTTGCA              GCTGCCC TGA GGGC-GC              TTCATAAAAATAGTG  57 16
 CHQ57_03420  708517 ..  708534 + -12.7  -5.06816   CTTCTCTGTTTGCAA             GCCGCTC CCGG GAGCGGC              TTTTTATTGCGCGGT 100 49
 CHQ57_03425  710008 ..  710038 +   -17  -3.72576   CTTGTCAGACAGACA       GCAAAAAGCCGCTC GAT GAGCGGCTTTTTGA       TTTCATGGCGGGCGG 100 44
 CHQ57_03435  712969 ..  712984 +  -4.6  -2.82742   ACAGGAGAGCAGATT              GGCCTG GCTC CAGGGC               TCCTTGTGGGCGGCT  43 395
 CHQ57_03450 NONE
 CHQ57_03455  716867 ..  716888 +  -5.1  -2.73875   TTTGCGCGGCCGCTT           GCTGCGC CGCTGGTT GCGTAGC            TGATATTGACCCCCC  48 1
 CHQ57_03465  718349 ..  718362 +  -3.7   -3.8046   CGCAGTCAAGGTGAT               GGGGC CGCT GCCCA                TTTGACCTTTTTCAG  56 7
 CHQ57_03475  721650 ..  721664 +  -2.8  -3.94746   CCGGGTTGGCAAAAC               GCCA GCTGGCG TGGC               TTTCGTTGCGTATAC  55 175
        prfC  723389 ..  723418 + -15.1   -3.5365   TGCAGGTTGATGACA       TAAGAGACCCCGC TTCG GCGGGGTCTTTTG        TTATGTGCGCTTTCG 100 74
 CHQ57_03485  723880 ..  723898 +  -2.3  -3.29593   ACTATTTCTCCATAC             GGCGCCA ATATA TGGTTCC             TCTTGGTTATGGGAT  45 53
 CHQ57_03490  724798 ..  724832 +    -9  -3.01712   GATCGAGGTCAGGGT     CGGCCACCCCGTAGCC CTT GTCGGCGGTGAGGCCG     TATTCGGCGGAGACG  60 438
 CHQ57_03505  727393 ..  727410 + -14.1  -5.24129   AGCAGAAAACAAAAA             GCGCGCC GATT GGCGCGC              TTTTTTATACCAGCA 100 87
 CHQ57_03520 NONE
 CHQ57_03525  733242 ..  733255 +  -2.3  -3.38007   CCCGAAAGTTGGACA               CCCAA CGAG TAGGG                GTTTTCGTTTATATG  45 84
 CHQ57_03530  734957 ..  734967 +  -6.8   -3.3095   AGGGGATGCCCTCAC                 TGCG AGG CGCA                 TTGTAGGGGCTCTGT  59 360
 CHQ57_03535 NONE
        cydB NONE
 CHQ57_03545 NONE
 CHQ57_03550  738693 ..  738727 + -15.7  -4.08853   TTCCTTTCATAAAAA     ACGGGGGGAGGCAGG ATTTC CCTGTCTCCCCCTGC     TTCTTTCCTATTCAG 100 29
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB NONE
         pal  743525 ..  743542 + -11.3  -4.88918   TCGTATATAAGCAAG             CGGCCAT TTCG ATGGCCG              TTTTATTTGCACTAA 100 60
        ygbF NONE
 CHQ57_03590 NONE
 CHQ57_03595 NONE
 CHQ57_03600 NONE
 CHQ57_03605 NONE
 CHQ57_03610 NONE
 CHQ57_03615 NONE
 CHQ57_03620 NONE
 CHQ57_03625 NONE
 CHQ57_03630 NONE
 CHQ57_03635 NONE
 CHQ57_03640 NONE
 CHQ57_03645 NONE
 CHQ57_03650 NONE
 CHQ57_03655  745941 ..  745958 + -12.7  -5.67967   CCACCAGATTAAAAA             GCCCGCA ACGA TGCGGGC              TTTTTTTATGGTCGT 100 35
 CHQ57_03665  749336 ..  749358 + -19.2  -4.02542   ACAGTCTGAATAGAA           GAGGGCACCC GTT GGGTGCCCTC           TTTCGTTATGGGTTT 100 61
 CHQ57_03680 NONE
 CHQ57_03685  756142 ..  756162 +  -3.4  -3.59979   GCTCGCGACCTTGTT           CATCAA-AC AGGA GTCTTGATG            TTTGAAATGGAAAAG  51 7
        glgX NONE
        msrB  758770 ..  758795 + -20.5  -5.76633   CACTGATAGGAAAAA         CGGCGCCTCTG TTAA CAGAGGCGCCG          TTTTTTTGTGTGTCC 100 51
 CHQ57_03705 NONE
 CHQ57_03710  761797 ..  761820 +   -16  -5.09225   TGTCGGTCGGATGAA          GAGGGGTCGC AATA GCGGCCCCTC           TTTTTTGCCTCGCAT 100 48
 CHQ57_03715  765232 ..  765249 + -12.7  -5.07486   AGGTCTTTACATCAA             GGCTGCC TGCG GGCAGCC              TTTTTCTTGGCCGTG 100 50
        nudC  766251 ..  766263 + -10.5  -2.61144   ATCTTTGCGCTTGCA                GCGGC CTG GCCGC                ATCTTTGGGCCGTCC  69 98
 CHQ57_03725  767432 ..  767454 + -16.4  -4.87626   GAAAGCCCTAAAAAA           TTAAGGCGCC AAT GGCGCCTTAA           TTTTTGGTATTGGCC 100 48
         mpl NONE
 CHQ57_03740  770337 ..  770366 + -14.9  -5.06414   AGCAGACAAACAAAA       GCGGCGCCGACCT GAAC AGTCCGGCGCCGC        TTTTTATTCACGAGG 100 59
         hpt  771786 ..  771801 + -11.8  -4.60797   CATCTTCTGTCTGCA              GGCGGC CTTG GCCGCC               TTTTCTGTATCGAGA 100 80
 CHQ57_03755 NONE
 CHQ57_03760  773548 ..  773563 + -11.8   -4.7497   TGCAACCATGAAAAA              GGCGCC TGTT GGCGCC               TTTTTACTGCATGAG 100 43
        hrpB  783761 ..  783772 +  -3.6  -3.53012   TATCTCGATACCAAG                GTGC GCGA GCGC                 TTTGACGGGGAGAAG  51 323
 CHQ57_03820  786409 ..  786433 + -22.9  -4.79756   GCTACCAGTAAAAAA          GCCGCCCGGTC TGT GACCGGGCGGC          TTTTTCCATTATGTG 100 59
 CHQ57_03835  788224 ..  788238 +  -5.6  -3.33261   CCTTTTGAATAAGCT               GGCAAG CGT CATGCC               TTCTGGCCATTGGCG  54 29
 CHQ57_03840  789948 ..  789975 + -21.4  -3.91196   CAGTACTGGCGAAAA        GCAGAAGGGGCC ATCA GGCCCCTTCTGC         TTTGGTCTCTGTAGC 100 47
 CHQ57_03850  791471 ..  791494 + -13.2  -4.68593   TAATATCAAAAAAAA          GAAGGTCGGT TTAC ACCGGCCTTC           TTTTTGGCTACTGCC 100 38
 CHQ57_03855  792730 ..  792750 +  -2.5  -2.71712   CCGCAGGCCAGAGCA            GTTCGCT CTGGCCA AGCGACC            CTTTGAACAGCAGCA  39 131
 CHQ57_03870  796495 ..  796515 +  -5.4  -2.78384   CTCCTTGTATGTCAG           CGCGAATCC GGTT GGG-TCGCG            TATAGTGAAGGGAGC  48 41
 CHQ57_03875  797311 ..  797324 +  -3.1  -3.62591   GATAATTTCGCGGTT               TCCAT GTTT GTGGA                TTTAACGGTTGTGAG  51 80
 CHQ57_03880  797721 ..  797736 + -11.8  -4.84918   AACAGCGCGATTGAA              GGGCCC AACA GGGCCC               TTTTCTATTTATCCC 100 49
 CHQ57_03885  799878 ..  799888 +  -5.4  -3.53811   GTTCACACAGATTGC                 CTTG ATT CAAG                 TTTAGAGACAGTACA  56 58
 CHQ57_03890 NONE
 CHQ57_03895  800149 ..  800161 +  -3.4  -4.00532   AATCTATGCCTTTGA                CTTC TTTAT GAAG                TTTGCTCTTTAACAA  58 96
 CHQ57_03900 NONE
         rrf  803462 ..  803480 +   -16  -5.60689   ACCCAACACGAAAAA             CCCCGCTC ATC GAGCGGGG             TTTTTTATTATCTGA 100 41
 CHQ57_03910  804238 ..  804269 + -11.6  -5.44119   AATGAATCAGTTAAA      TGCCTCGGCCCAGAA ACC TGCTGG-CCGGGGCA      TTTTTTTAGGATAGA 100 70
 CHQ57_03915  806546 ..  806557 +  -4.4  -3.40403   GCTATTACGGTAAAT                TCTG AGAA CAGA                 TTATGGTCAAGAAGA  51 21
 CHQ57_03920  807267 ..  807286 + -10.7  -5.16071   TGAGCACTTGAACAA            GACCGGC CACAGT GCCGGTC             TTTTTATTGCTGCTT 100 49
 CHQ57_03925  808852 ..  808873 + -15.9  -5.15634   TCTTCATATGAAAAA           GGGGAAGCC AAGC GGCTTCCCC            TTTTTTGATCCCGTC 100 53
 CHQ57_03945  812782 ..  812803 + -14.5  -2.87501   CGCCATTGCCTGTTA           TCGACCAGC TCTT GCTGGTCGA            TGCTATTTGGTCCCA  90 53
 CHQ57_03975  819722 ..  819735 +  -9.5  -5.17353   GCTTGCGGTAAAAAA               GGGCC ATTC GGCCC                TTTTTTCATAAATCT 100 52
 CHQ57_03980 NONE
 CHQ57_03985 NONE
 CHQ57_03990  821638 ..  821661 + -10.2  -6.04419   CTGTGCTCTGCTCGA          CGGCCCACCC TGAC GGGTGGGCTA           TTTTTTTCTTGTTTT 100 43
        ilvB NONE
 CHQ57_04000 NONE
 CHQ57_04005  824347 ..  824362 + -10.4  -4.56597   TTTGTTATCCCAAAG              GGGCTC TTCG GAGCCC               TTTTTCACGGGCGCA  93 57
 CHQ57_04025  830302 ..  830317 + -11.8  -4.20531   TTCCAATCAGACAAA              GGCGCC CAGA GGCGCC               TTTTCCATCCATGTC  93 53
 CHQ57_04045 NONE
 CHQ57_04050  834575 ..  834593 + -11.7  -4.72631   AAAACAGAATAGAAA             CAGGGGC CTAGT GCCCCTG             TTTTGTTAGGTTAAT 100 29
 CHQ57_04055  835891 ..  835911 + -15.4  -5.15167   AAGCAGACCAACAGA            CGGGCCCC AGTGC GGGGCCCG            TTTTTATTGCTGGTC 100 98
 CHQ57_04065  837526 ..  837540 +  -2.1  -3.25823   GCCCAGTGGTTTGCC              G-AGCG GCCC CGCTAC               TTGCTCTGACCGGCG  43 2
 CHQ57_04070  838262 ..  838319 +  -3.6  -3.30239   ACTTTAAGTTTGCAG CC-CGTTGCAGTAACGTGGGGGCTCT-CA TCG TGCATAGCGCCCACCTTA-TCCAACGAGG TCTTCATGTTTGAAT  49 34
 CHQ57_04075  838768 ..  838783 +  -2.5  -3.35597   TGATAATTGAGTCAA              GTGAG AGGCGG CTCGC               TATTTCAGAGCTCAA  45 31
 CHQ57_04080  839582 ..  839607 + -19.1   -3.7282   CACGCGCACAAATGC         CAAGGCCACCC CATG GGGTGGCCTTG          TTGTTGCTGGGATGG 100 48
 CHQ57_04090  843137 ..  843150 +  -2.3   -2.8805   GGCTGAAGCGCTGGC               TGCTC TCCT GAGCC                TGTCTGCCGCCTCAT  41 15
 CHQ57_04095  844758 ..  844777 +  -4.2  -5.41143   CGATCGCTGCATTGG            CAGCGCGA AGAC TCGTGCTC             TTTTTTTACCGCGTG  86 216
 CHQ57_04100  845128 ..  845147 + -13.6  -4.98522   CTTCTTGCAAGAAAA            TGGCAGGC TTGG GCCTGCCA             TTTTTGTATCCGGTT 100 60
 CHQ57_04105 NONE
 CHQ57_04110 NONE
 CHQ57_04115  852761 ..  852792 +   -10  -3.14132   ATGATCTGGATAAAT      AAATGAGGCGGGCC AGAT GGCCCGCCTCAGCA       TTGGTACAGGCGGCG  70 58
 CHQ57_04140  857055 ..  857078 +   -16  -4.57353   AAAGGTGCAACGAAA          GAGGCTCGGC ATTT GCCGGGCCTC           TTTTCTATCATCGAC 100 48
 CHQ57_04155 NONE
 CHQ57_04160 NONE
 CHQ57_04165  863011 ..  863037 +  -6.5  -3.07962   TCCCCAAAACTGACG        CGCGGGAGCTGGC GAT GCC-GCACCC-CG        TGTTGGCGTATACCA  53 28
 CHQ57_04170  864950 ..  864976 +  -2.8  -3.61398   GTGCTGGAGGCGTTT         GCACATGACGGC TGA GTTGCCGAGTGC         TTGTTCCAACACACA  51 11
 CHQ57_04175  865985 ..  865998 +  -3.8  -3.99229   GAGTGGCTTGACACT               CCTG TATAAT CAGG                TTGTTATATTGATAT  58 30
 CHQ57_04180 NONE
 CHQ57_04185  867666 ..  867704 +  -2.5  -3.21747   TTATCAGGCATTGAG  TCGTGGATGAAG-ATGAA TGCT TACAGGCTTCATCAACGA   TTGATGATCAGATAG  43 27
        hflK NONE
 CHQ57_04195  869817 ..  869836 + -13.6  -4.61873   AAGCATAAGACCAAA            GGGCCTGA TGAT TCAGGCCC             TTTTGCTTTATGGCA 100 46
 CHQ57_04200  870135 ..  870149 + -11.4  -5.14563   GCAGACAATAAAAAA               GAGGCC CGA GGCCTC               TTTTTTCATCCAGCA 100 73
        rplU  871688 ..  871701 +  -2.3  -2.60194   CACTGAAGTCAAAAT               CACTG GCAT CAGCG                CTTAATTAGAGGAGT  38 7
 CHQ57_04215  872004 ..  872023 + -16.4  -5.35224   CCGCAAGGATCCGAA            GCCCCGCC AACA GGCGGGGC             TTTTGTTTTTCTGAC 100 48
        obgE  873429 ..  873452 + -18.2  -5.24129   CACCGATGAGAAAAA          CCGGAGCCTG GCAA CAGGCTCCGG           TTTTTTATGGGGAGC 100 78
 CHQ57_04225  875178 ..  875197 +   -10  -5.31877   GTCTGGGATTTAAAA            CGGTCAAC TTGG GTTGGCCG             TTTTTTATGGTGAGT 100 48
 CHQ57_04230  877048 ..  877061 +  -9.5  -4.39877   ACCGCGATGAGAAAA               GGGCC TGCG GGCCC                TTTGTTCGTTGTTGC  86 50
 CHQ57_04250 NONE
 CHQ57_04255  882769 ..  882781 +  -3.3  -3.16534   GGGGAGCGACCGGTT                TCCTG ATC CAGGC                TTACATCTAATTCAT  45 20
 CHQ57_04260  883418 ..  883444 +   -21  -3.88232   TTGGTGCGAATAAAA         CAAAGCCCGGCA ACT TGCCGGGCTTTG         TTCTTGTATAACGCG 100 45
 CHQ57_04295 NONE
 CHQ57_04300 NONE
 CHQ57_04305  893006 ..  893024 + -14.6  -5.27335   GCCAGCCATAAAAAA             TGCCCGTC GAT GACGGGCA             TTTTTGTTTGCGAAA 100 53
 CHQ57_04335  900274 ..  900291 + -12.7  -4.25104   TCTCACAATCAAAAA             GAGCGCC TGAT GGCGCTC              TTTTGCTACCCAGGA  95 52
 CHQ57_04355 NONE
        hutZ  904247 ..  904266 +   -15  -5.49234   CTTTGCAATAAAAAA            CGGGCAGC CCAG GCTGCCCG             TTTTTTATTGCGTGT 100 49
 CHQ57_04380  908608 ..  908623 + -11.8  -4.54047   ACATCTTATGATTCA              GGGGCC GCAA GGCCCC               TTTTCTGTGGACTGA 100 59
 CHQ57_04385  910058 ..  910075 + -12.7  -4.71061   GCCAGACAAAGTGAA             GGGGAGC ATGT GCTCCCC              TTTTTGCATGTCGCT 100 90
 CHQ57_04405  915913 ..  915938 +  -6.9  -4.86902   CGAGACGTCAAGATC         GGCGCTTTCTT ACAC AATAAAGCGTC          TTTTCTTCTCGTTTG  85 50
 CHQ57_04410  918909 ..  918929 + -16.9  -4.40561   TCTGTGAACCAACCG            GGGGCATGC TTG GCATGCCCC            TTCTTTTTCCCACCA 100 61
 CHQ57_04415  921372 ..  921391 + -12.1  -4.52589   ATGCGAGGTACCACA            GGCGGGG GCCAAG CCCCGCC             TTTTATCTAGCAAGA 100 60
 CHQ57_04420  923361 ..  923374 +  -9.5  -5.14965   TCGTTCAATAAAAAA               GGCCC GTCA GGGCC                TTTTTTCATGGGAAT  95 50
 CHQ57_04435 NONE
 CHQ57_04440  926034 ..  926063 + -16.5  -3.53012   TCGTCATGGTGTGAT       CACAACGGCCTGC TCTC GCAGGCCGTTTTG        TTTCAAGGGGAAAAG 100 41
 CHQ57_04465  929959 ..  929975 +  -5.8  -3.54424   GCAATCGCTTGTACC              TGCTGG GGCTG CCAGCG              TTTGCCCGCCTCGGC  58 347
 CHQ57_04485  932721 ..  932733 +  -3.3  -3.58343   AAAAGGGGCGTAAGT                CAGGA TCA TCCCG                TTTCGCAGTGATGAC  51 59
 CHQ57_04490  933509 ..  933525 + -10.8  -5.67063   GGCCCGATAAAAAAA              CCCGCG TTTAT CGCGGG              TTTTTTTATGGTGCA 100 57
 CHQ57_04505  935689 ..  935720 +   -16  -3.60525   TAAGCGCCCATCGTT      GAAAAAACGGCTCC TTAG GGAGCCGTTTTTAC       TTGTATCTCCCTGCG 100 38
 CHQ57_04510  937282 ..  937312 + -20.5  -4.16284   GGCAGATGAGCTTGT      GC-GCAGGGCGGCC AACT GGCCGCCCTGCTGC       TTTGTTAGAGGCTGT 100 72
 CHQ57_04545  944235 ..  944250 +  -2.4  -4.77775   ATAGCGTGCATTAGC              ACTCGC GATG GCGGGG               TTTCTTTTGTAAAAT  68 112
 CHQ57_04550 NONE
 CHQ57_04555  945948 ..  945960 +  -4.7  -3.09635   CCGGTTCGACAATTA                TGCCG GTC CGGCC                TTCGATGATGACAAT  48 105
         alr  947142 ..  947155 +  -9.5  -5.75342   ACCAAACGTAAAAAA               GCCCC GTCA GGGGC                TTTTTTTTCGACAAC 100 52
 CHQ57_04580  950705 ..  950733 +  -6.2  -3.48276   AAGGTGATAAGAGCA       GAAACAT-GGTGA TTGG TCACTGATGTTTC        TTATATCCGAGAGAG  58 3
 CHQ57_04585  951254 ..  951274 + -18.3  -4.37534   AAGCCGATTGGTGGA            GGCTCCCCG TCA CGGGGAGCC            TTTTCGTCTGCATTT 100 39
 CHQ57_04595  955143 ..  955162 +  -4.9  -4.08216   GGTGTGATGATCCAG            CCCGGCT TCGGCC AGCAGGG             TTTTCACCGAACTGC  61 244
 CHQ57_04605  959503 ..  959519 + -10.8  -3.25896   TTTAAAAAGCAAAAA              CCCGGC ACCAG GCCGGG              TCTTCTAAATGATGG  74 396
 CHQ57_04630  961454 ..  961475 + -15.9  -3.55761   CCCGCCTGAAACAGC           TGTGCCCGG CAGG CCGGGCACA            TTTCGCCAGTGGCTG 100 32
 CHQ57_04690  975483 ..  975494 +  -2.2  -3.46068   CAAGCCGCCCCTTAC                CCTG AGTC TAGG                 TATTTACATTCAGCG  47 110
 CHQ57_04695 NONE
 CHQ57_04700  978342 ..  978352 +  -4.6   -5.0133   CAAGCGAGTCGTCCT                 TGGG ATC CCCG                 TTTTTTCGACAAATG  79 172
 CHQ57_04705  978697 ..  978714 +  -2.7  -2.78813   GCCAGGCTCTTTATC             GTCGACTG AGC CGGTC-AC             CTTCTTCCGCTGCCA  41 17
 CHQ57_04710  979049 ..  979063 +  -4.2  -3.80625   AAGGTCTGAACCCTG               GTGTCA TCA TGGCGC               TTTACCTTCTCCCGA  56 78
 CHQ57_04715  979819 ..  979852 +  -5.8  -4.16943   CAACTGCTGCTTGAT     GGGCAGTCCGCCCG CATAAC CGGTCAGGCTGCCG      TTTTGGCCTATCACG  68 58
 CHQ57_04730  982488 ..  982513 +  -7.5  -3.07816   TCAGATAGCGCTGCT         CCAGATGCTGGC GCA GCCAGCG-CGGG         TTCAGTGCCTCGCCA  59 115
 CHQ57_04755  986743 ..  986753 +  -2.4  -4.56775   AGCGTGAAGCCGCTG                 GTGG CCC CCTC                 TTTTTCCAACCGGGT  66 312
 CHQ57_04810  999686 ..  999706 +  -2.4  -4.71061   CTATTTACTGGCTGA            GCGCTGGA TCACT TCCCCCGC            TTTTTCGATATCCCT  66 61
 CHQ57_04825 1002690 .. 1002718 + -16.3  -5.10033   AATAATGTTGAGTGA        TGGACTAAATGAT TTT ATCATTTAGTCCA        TTTTATTTATCTTGA 100 49
 CHQ57_04835 1004437 .. 1004461 +  -4.3  -3.16475   AATCAGATGCACATC          AGGCTTGTA CATCAGA TACAAGCCA          TTAGCTGTATAGATC  49 295
 CHQ57_04840 1005408 .. 1005429 +  -8.7  -3.09289   GCCATTCAAATTCAA           TTCGGGAGT TTCT GCTCCCGGA            TCTGTTAAGCTAATC  62 79
 CHQ57_04880 1014662 .. 1014717 +  -2.8  -4.03078   ATTAAGTCGTGGCGA TGG-GCTCC-TTT-TACCGCTGGTTGA TCAGT TCAGCTAGCGGCACAAATGGACCACCA TTTATCCTCTCCTGC  58 131
 CHQ57_04900 NONE
 CHQ57_04905 1017029 .. 1017039 +  -3.2  -2.62616   AACGATCTGCCTATC                 CGTC ACT GATG                 TGATATCCACCATGG  40 55
 CHQ57_04910 NONE
 CHQ57_04915 1021180 .. 1021191 +  -2.2  -2.71125   TTGTATGCGGGTGGG                GTCA TCGT TGGC                 GTGTTTATCAAGCGT  39 239
 CHQ57_04920 NONE
 CHQ57_04925 1023440 .. 1023462 +  -6.2  -2.73364   GGATCTGGTGCTCTA           TGTCAACGGC ATT GCCCTTGGCG           TCATTGAACTCAAGC  51 519
 CHQ57_04945 1028744 .. 1028759 +  -3.2  -3.73224   TCCTTGATGATGCCA              TCGATG CCGC CATCGC               TTTGGTAACGGGTGG  53 365
 CHQ57_05040 1037315 .. 1037333 + -13.2  -3.68738   GGCCTCCAGTGCTTG             CCTGACTG CCT CAGTCAGG             TTGGTTTCTTCCCGC  88 346
 CHQ57_05070 NONE
 CHQ57_05075 1042807 .. 1042853 + -18.4  -3.44319   GCGTGCCGAGCTGAG GTAAAAACAAAAAAGGCGAACA TGA TGTTCGCCTTTTTTGTTTGTAG TTATGGTCAGTTGCC 100 43
 CHQ57_05085 NONE
 CHQ57_05095 1046218 .. 1046249 +    -3  -3.96148   AGAGGGCAAGAACGT      GAGTCGGGTC ATAGGCAAGCCG GAGCCGACTC       TTTATACTGACGCCC  55 56
 CHQ57_05100 1046848 .. 1046868 + -16.9  -3.76393   TAAGCCCTTGCCAAA            CAGGCTCCG TTA CGGAGCCTG            TTTCAGTTCAAGTGT 100 38
 CHQ57_05105 1047696 .. 1047717 + -14.5  -5.05505   GTATTTTGATTGCTT           GCCCATGAC GTCA GTCATGGGC            TTTTTGGTTTCTGGT 100 55
 CHQ57_05110 1049121 .. 1049137 +  -7.9  -2.54896   GCGACCCTGGCCCTT              TGGGCCG GGG CGCCCCA              TAGATTGAATGGAAG  56 361
 CHQ57_05115 NONE
 CHQ57_05120 NONE
 CHQ57_05125 NONE
 CHQ57_05130 NONE
 CHQ57_05135 NONE
 CHQ57_05140 NONE
 CHQ57_05145 NONE
 CHQ57_05150 NONE
 CHQ57_05155 NONE
 CHQ57_05160 NONE
 CHQ57_05165 NONE
 CHQ57_05170 1058446 .. 1058464 + -13.1  -5.95286   TTTATCCACCCGCTT             GCCGCCC TGTTT GGGCGGC             TTTTTTGTTTTTGAT 100 100
 CHQ57_05175 1060297 .. 1060316 + -11.4  -5.40474   ATGTTGTAAGCCTTT            GGCGAGCT TGAT GGCTCGCC             TTTTTTTCAACGACT 100 83
 CHQ57_05180 1061428 .. 1061450 +  -6.9  -3.53012   CTTTTCCCGATGACG           CAGGGCAGG TAGAC TCTGCCCAG           TTTCACCAGAACACG  61 62
        galE 1062632 .. 1062657 + -20.5  -5.29782   GCCTGAATAGCAAAA         CGCCCCGGCAT CGCA ATGCCGGGGCG          TTTTTTATGGCTCTG 100 157
 CHQ57_05190 1063719 .. 1063732 +  -5.3  -3.03771   ATGTGCGAAGGGCTG               GCATT ACTG AATGC                TCTTGCCCGCTCTCA  50 49
 CHQ57_05200 NONE
 CHQ57_05205 1064766 .. 1064790 + -12.2   -5.4251   TCCGCCATATATATA          GCCCAACTGA TTTAT TCGGTTGGGC          TTTTTTGTATCTGCG 100 34
 CHQ57_05215 NONE
 CHQ57_05220 NONE
 CHQ57_05225 NONE
 CHQ57_05230 NONE
 CHQ57_05235 NONE
        atpE NONE
 CHQ57_05245 NONE
 CHQ57_05250 NONE
 CHQ57_05255 1080717 .. 1080730 +  -2.4  -3.15861   TCGGTTGGATAACGC               CATG AATGCC CATG                TTCGTAAACCTCATC  43 128
        budA NONE
 CHQ57_05270 1084414 .. 1084445 +   -26  -2.78384   GCCCGGCCAATAGCA      GAGCGCCCCTTGCC GGCT GGCAAGGGGCGCTC       TGTCATGACAGAGGG 100 66
 CHQ57_05285 1086809 .. 1086826 + -12.7  -5.71712   CAGAGCCATAAAAAA             CCGGAGC AGCT GCTCCGG              TTTTTTTGTGTCCAC 100 112
 CHQ57_05320 1092819 .. 1092833 +  -5.6  -4.18197   GATTTTGTGATAGAG               CGGGGA TTT TCCCCA               TTTTGCATAGAAGCT  68 266
 CHQ57_05330 NONE
 CHQ57_05335 1095581 .. 1095591 +  -4.6  -3.73402   CATCAAGCGGAGGAT                 CGCT CGT GGCG                 TTTAATAAAGACTCT  58 10
 CHQ57_05340 NONE
 CHQ57_05345 NONE
        nqrE NONE
        nqrF NONE
 CHQ57_05360 NONE
 CHQ57_05365 1100166 .. 1100191 + -20.5  -5.33405   AAGGCTGAATGGCAG         GCGGGCTGACC TTGG GGTCAGCCCGC          TTTTTCTTTGGTGGA 100 73
 CHQ57_05375 1101595 .. 1101608 +  -3.8  -2.88134   TGACGGGGAAGTTAA               CCAG CTGAGC CTGG                ATTTCGCTTGATTAG  45 1
 CHQ57_05380 1103884 .. 1103911 +  -6.4  -3.01712   ATTCAGATGACAGAC        TGGG-TTAAATCG GTC CGATTTAAGCCCC        TCTTCCCGCAGAGGA  53 82
 CHQ57_05385 1105009 .. 1105027 +  -6.7  -2.80074   AGAGGCTCGTCGCAG            GGCA-CGG CTCG CCGATGCC             TGATGTTATGAGAGA  53 4
 CHQ57_05390 NONE
 CHQ57_05395 NONE
 CHQ57_05400 1107198 .. 1107223 + -17.7  -4.39166   CGTGAGCAGAAAAAA         GACCGATGGCA GCGA TGCCATCGGTC          TTTTGCTATCTGCGC 100 56
 CHQ57_05440 1117148 .. 1117182 + -19.5  -2.87132   CTGTCCCTGTGAGAC    G-AGAAGGGCCTTGCC ATCC GGCAAGGCCCTTCTGC     TATCTGGACACAAGG 100 43
 CHQ57_05470 NONE
 CHQ57_05475 1121924 .. 1121938 +  -6.4  -3.27525   TCCCCTCTATTCCCT               CATCCT GAC AGGGTG               TTGCCTTTGACGGCG  56 44
 CHQ57_05480 1122462 .. 1122490 + -11.1  -4.59993   TCGTCATTTTTTATT       CATCCCCGATGG GTTCGA CCA-CGGGGATG        TTTATTTCTGCGTTT 100 51
 CHQ57_05485 1124310 .. 1124329 +   -15  -4.86731   CAGTTAAGTTAGTCA            CTGCCCCC GTAT GGGGGCAG             TTTTGTTTCGCCGGG 100 51
 CHQ57_05490 1125378 .. 1125397 + -10.7   -4.7497   GTAATATTTATTTGA            GGCCTCC CTTGTT GGAGGCC             TTTTTAATCGGTAGA 100 62
 CHQ57_05495 1127237 .. 1127254 + -12.7   -4.7254   TCAGAGTTCCGAAAA             GGGAGGC GAAA GCCTCCC              TTTTTGCTGGCCGCT 100 57
        rpsB 1133650 .. 1133670 +   -14  -4.35604   GATGTAATTGGTTAG            CAGGGGCC CTTGT GGCCCCTG            TTTCTTGTCAATTCA 100 76
         tsf 1134611 .. 1134632 + -15.9  -4.03234   TTTTCCGTTTCCCCA           GACCGCGAC TTAT GTCGCGGTC            TTTATATGACCAGGA 100 51
 CHQ57_05530 1135412 .. 1135424 +  -2.6  -2.70932   ATATGATAGACACGA                GCCG CGTGA TGGC                TCGTTCGCCAAAAGG  39 46
 CHQ57_05535 1136029 .. 1136055 + -15.9  -4.84918   ACAGGTATATTACGA         GCGCCGTGTAG TGCCC CTGCACGGCGC         TTTTGTCTTTGTGGG 100 48
        uppS 1136860 .. 1136875 +  -4.6  -4.72007   AGACCGGCTAAATCC              CCTCCC AAGA GAGAGG               TTTCTTTTGCTAAAA  72 30
 CHQ57_05545 1137744 .. 1137756 +  -3.4  -3.06569   AGGAGTTCTGATGCA                CATC TTGCT GATG                GTTTTGAGCGCTTCC  43 30
 CHQ57_05550 1139016 .. 1139029 +  -3.8  -4.08578   TGAGTGATATTTCGT               GGCA TTGTGC TGCC                TTTATCGTTGCCTTT  60 41
        rseP NONE
        bamA 1142994 .. 1143014 +   -14  -3.10796   CTAAGGACGGACGCG            CCCCCACC CAGCC GGTGGGGG            TATTCAATGATGGGA  87 37
 CHQ57_05565 NONE
        lpxD NONE
        fabZ NONE
 CHQ57_05580 NONE
 CHQ57_05585 1147124 .. 1147141 + -12.7  -4.41047   TCATCTACCCCATGT             CAGGCCC TGCG GGGCCTG              TTTTGATTCAAGGCT 100 68
 CHQ57_05590 NONE
 CHQ57_05595 NONE
        accA 1152266 .. 1152293 + -13.4  -5.40072   CTCTAAATGGCGTCA        AAAGGCCCCTGC GTAT GCGGGGGCCTTC         TTTTTTTGGGCGCGG 100 54
 CHQ57_05605 1154238 .. 1154263 + -16.9  -3.09116   GTTGCCGGCCGTATC         CACAGGCTGCC TTCG GGCGGCCTGTG          TCGTTTCTGTCTGCG 100 74
        cadB 1156268 .. 1156305 +  -7.1  -2.58999   CCCTTTTCTTCTTCC   GAGCGCTCTTCACTCA CCATCCC TGA-TGGAGAGCGCCC   CTTCATGTGTGGAGC  52 43
 CHQ57_05615 1158475 .. 1158490 + -11.8  -4.67011   TCAAAGTGACAACAA              CGGGCC GCAA GGCCCG               TTTTTCCCTGCGGTT 100 41
 CHQ57_05620 1159376 .. 1159396 +  -7.6  -3.25729   GGTGCGTGAGCTGGC           TAC-CCGGC TTTA GCCGGCGTA            TTCGTGCTACTTGTG  61 13
 CHQ57_05635 1163672 .. 1163705 + -16.9  -3.53444   AGTTACACTGCTGAA     TGAAGAAGCCGCCTC ACAA GAGGCGGCTTTTTTA      TTTGAGCAAGGATAG 100 48
 CHQ57_05640 1165085 .. 1165101 + -15.1  -4.72986   CCAGCCCGACAAAGA              GCCCCGC AGT GCGGGGC              TTTTTGCTGGCCATC 100 41
        tilS 1171966 .. 1171994 + -11.6  -4.63527   CCCGCAGTGAGCTCA        GGCCCGCCATGC AGCTA GCCTGGCGGGCA        TTTTTACGATCCTGG 100 31
 CHQ57_05675 1174989 .. 1175022 + -10.3  -2.92439   AAAGTTGCTGGAGGG     GCGT-TAGGCCTTGCG CTG CGCAAGGCCGACAAGC     TGATTTACGCCTCTT  68 19
 CHQ57_05700 1179371 .. 1179393 + -19.2  -2.83164   GTGACTGACATTGAA           GAGGGGAGCC ATT GGCTCCCCTC           TCTGCTGATGCGTGG 100 63
 CHQ57_05725 1186055 .. 1186078 + -18.2  -3.76952   AAACGATACAAAAAA          GAGGCCACCC GAAT GGGTGGCCTC           TTTACCTTGGGTACC 100 178
 CHQ57_05740 1190156 .. 1190171 +  -3.2  -4.16837   TGGGTGACGCAGGCA              GCCTGA CGGC TTGGGC               TTATTTGTCGTTATC  60 65
 CHQ57_05755 1193175 .. 1193203 + -18.9  -4.12397   TCAATGGGTTGAAAC        AAGAGAGCCGGGC ATT GCCCGGCTCTCTG        TTTATCATTCTGTCG 100 49
        topA 1197591 .. 1197607 + -13.7  -5.06816   CACTATGATGAAAGA              GGCCCCT TGC AGGGGCC              TTTTTGTTGGGAGAT 100 55
 CHQ57_05825 NONE
 CHQ57_05830 1215087 .. 1215101 +   -10  -3.79866   CAGCGGTAAATATGA               CACACC ACA GGTGTG               TGTTTCTGTTTCTCA  79 64
 CHQ57_05840 1215843 .. 1215858 +    -9  -5.58179   ATTTCAGACAAAAAA              GAGAGC TTCG GCTCTC               TTTTTTATTGTCATC 100 46
 CHQ57_05845 1216812 .. 1216841 +  -2.7  -3.60792   CAGCCTCATCATGCT       CG-TACTCGCCCAC ATT GATGGCGGGTGTCG       TTTGCGAGTTCCCAC  51 218
 CHQ57_05850 NONE
 CHQ57_05855 1219657 .. 1219684 + -16.4  -4.10161   TGACCCCTGTTCAGT        CA-AAGGCCCCGC TTC GCGGGGCCTTCTG        TTTTCAGCGGTCGTC 100 52
 CHQ57_05890 NONE
 CHQ57_05895 1229461 .. 1229489 + -18.9  -3.94409   ATGGGCAATAAAACA        GACGGGCCTGCCA GGG TGGCAGGCCCGTG        TTTGTCAGTGCTGTC 100 78
 CHQ57_05910 NONE
 CHQ57_05915 1233674 .. 1233692 +  -3.1  -4.08394   TTGCCATCCCCTCGC             TCCAGCA CAGGT TGATGGA             TTTTACGCCGCATGT  58 160
 CHQ57_05920 NONE
 CHQ57_05925 1235089 .. 1235105 +  -2.3  -3.83561   GAACCTTCAGGATCC              TGACT CCCTGTC AGTCA              CTTTTTTTCCGGGGG  51 23
 CHQ57_05935 1237583 .. 1237597 +  -2.7   -3.0094   GCGCCTGCGTGGTGA               CGGGC TGAAC GCCCC               TATCTGTGCATAACA  43 18
 CHQ57_05940 NONE
 CHQ57_05945 NONE
 CHQ57_05950 NONE
 CHQ57_05955 1242578 .. 1242591 +  -3.7  -3.01712   CTGGGCCTGCAATCT               GGCCG AGTC CGGCA                TCTTGCGCGGAAACA  43 155
 CHQ57_05965 1245246 .. 1245269 + -13.2  -5.37593   GAGATCAGCATGAGA          GGGAGATGGC TTGG GTCATCTCCC           TTTTTTCGTTTGAGC 100 49
 CHQ57_05970 1246888 .. 1246915 +   -20   -4.8048   GCTCACTGTGAAAAA        CAGGAAGCCACC TCAG GGTGGCTTCCTG         TTTTTGGTCTGGCAA 100 55
 CHQ57_05975 NONE
 CHQ57_05980 1249808 .. 1249829 + -12.3  -3.71378   GTTTGTCGATCATCA           GGGGCCATT CACG AGTGGCCCC            TTTGCATATCCGCTG  91 127
 CHQ57_05985 1250710 .. 1250728 + -14.6   -4.8048   AGACAGCAATTCCAG             GCCATGGC ACT GCCATGGC             TTTTTACTATCCGCA 100 78
 CHQ57_06005 1257372 .. 1257408 +   -14  -4.05931   TGAAAAGCGTGTGAT   GAGCAAG-AAAGGGAGGC CGA GCCTCCCTTTTCTTG-TC   TTATTGTTGCTTGTT 100 38
 CHQ57_06030 1264593 .. 1264607 + -11.4  -2.80816   ATCTTGTCTCCATCG               GGTGCC GCT GGCACC               TCTCCTGGATCCGAG  73 90
 CHQ57_06040 1269633 .. 1269651 + -11.7  -5.09204   TCAGCCATGGCAAAA             GGCCCCT GTCAA AGGGGCC             TTTTTGTTGGCGTGT 100 51
 CHQ57_06050 NONE
 CHQ57_06055 1272339 .. 1272357 + -10.3  -5.46657   TTTTTCATAAAAAAA             CCGAAGC ACATG GCTTCGG             TTTTTTGTTGCAGTG 100 58
 CHQ57_06080 NONE
 CHQ57_06085 NONE
 CHQ57_06090 1279811 .. 1279824 +  -2.3  -3.38007   CCCGAAAGTTGGACA               CCCAA CGAG TAGGG                GTTTTCGTTTATATG  45 91
 CHQ57_06095 1281691 .. 1281713 +  -3.3  -3.33696   GGGCGGAAGGTGGAG           CGGGTGGCA AAGAC TCCGACCCG           TTCGTTGCCGCCCAG  47 525
 CHQ57_06105 1283225 .. 1283248 + -18.2   -3.7108   GTGATTGAAGTGAAA          GAGGGCGTCC GTCG GGACGCCCTC           TTTCACTATCCGGCT 100 63
 CHQ57_06130 1288080 .. 1288098 +  -7.4  -2.82987   TTTCGCACTTGATTT             TGATGTCC TGC GGGCATCG             TATAATGGCTATTAC  57 115
 CHQ57_06135 1288179 .. 1288198 + -13.6  -5.60556   GCTTTCATGCAAAAA            GCCCACTC CTGC GAGTGGGC             TTTTTGTTTTGTGTT 100 41
 CHQ57_06145 NONE
 CHQ57_06150 1290565 .. 1290586 + -10.8   -3.1247   CGGACTGTTCGCTGT           GCGGGCCT ATGGCC GGGCCCGC            TTCCATGTAGAGGCT  64 260
 CHQ57_06160 1291437 .. 1291454 + -12.7  -4.68593   AGCTGTCATCAAAAA             GGGACGC CGCG GCGTCCC              TTTTTCAATACTGCG 100 80
 CHQ57_06170 1294410 .. 1294434 + -12.9  -5.13741   ACAGAAATCAGAAAA          GGCCCGTAC CCACCCA GTACGGGCC          TTTTTGTTGGATTGG 100 195
 CHQ57_06175 NONE
 CHQ57_06180 NONE
 CHQ57_06185 1299299 .. 1299316 + -12.7  -5.00642   CGATAGAAATAAAAA             TCCCCCG GCAA CGGGGGA              TTTTTCTATCCGTTG 100 60
 CHQ57_06195 1300438 .. 1300455 + -12.7  -5.06414   ACGGGAAACAAAAAA             TCCCCCG AGCG CGGGGGA              TTTTTATTGCGCGAA 100 98
 CHQ57_06205 1301829 .. 1301846 + -12.7  -5.52909   CGATAGAAATAAAAA             TCCCCCG GTAA CGGGGGA              TTTTTTTGCCTCTTA 100 60
 CHQ57_06220 1305711 .. 1305730 + -16.4  -3.23708   GACAGTGCATGCTAG            CGGGGGCC ATCA GGCCCCCG             TGCTTTTTGGGGCGC 100 52
 CHQ57_06225 1306580 .. 1306605 +  -3.9  -3.87373   GAGCCCATGTAGAGG         CTGC-CGCCATC CCA GCTGTCGTGCAG         TTTGTGGGGCCTGTC  56 113
 CHQ57_06250 1311965 .. 1311983 +  -6.7  -3.28924   GTGGATATAGCCGAA            GGTGC-GC TGGG GCAGCACC             TTGTCCCGCCCCATC  56 391
 CHQ57_06270 1317101 .. 1317115 +   -10  -3.53012   GCCAACTTCTAGTGT               CGAGAC TAT GTCTCG               TTTGGGAAAAGAACC  74 29
 CHQ57_06275 1318476 .. 1318506 +   -17  -3.06796   GGCAGATGCCAGAAA       TAACAAGGCCACCG TTA TGGTGGCCTTGTTG       TTGACTGCAGTGACA 100 75
 CHQ57_06290 1319699 .. 1319716 + -12.7  -4.39166   ATTGAATATAAAAAA             CACCGCC AGCT GGCGGTG              TTTTGATATGTCGGC 100 40
 CHQ57_06300 1320896 .. 1320918 +  -2.6  -3.29739   AGGCATGGGGCGCTA           TGGGGCAGTA ATA TATAGCGCCA           TTCGTCTACCTTGAG  45 79
 CHQ57_06305 1321674 .. 1321698 + -12.2  -4.21773   CGGATCGATCATGAA          TGATGCCGCC CGCGA GGCGGCATTA          TTATTTGTATTCACC  95 46
 CHQ57_06360 1335132 .. 1335149 + -14.1   -5.1963   CCATCGCTGTGCTGA             GCCCGCC GCTC GGCGGGC              TTTTTATTGGTTGCG 100 44
 CHQ57_06365 1337342 .. 1337371 + -15.1  -2.51312   GAAATAAGCCACACC       CAGATGGGTAGAG CCCG CTCTACCCATCGG        CTTGATCGATGAATT  89 34
        dnaJ 1338610 .. 1338627 +  -9.8  -4.89063   GCGCATCCCAGCAAA             GCCGGC CTCTGT GCCGGC              TTTCTTTTTGCCTGC 100 46
 CHQ57_06375 1340371 .. 1340381 +  -2.4  -2.53798   TCACAAAAATGGCAG                 CCGG TGC CAGG                 ATCTGTTGGTTTGCT  38 54
 CHQ57_06380 1341401 .. 1341448 + -18.5  -2.85351   TTTTGCGATCAGCCT CAAGCGGCTGTTGAGCTGCGG CTAGAA CCGCAGCTCAACAGCCCCTAC TCTCATGTGACAAGG 100 12
 CHQ57_06385 NONE
 CHQ57_06390 NONE
 CHQ57_06395 1345295 .. 1345318 +  -2.4  -3.33737   ATAGCCCCCAGAGTG          CG-CTGGCG CAGTCGC CGCTAGTCG          TTCTCAGCCTTGGTG  45 5
 CHQ57_06410 1348947 .. 1348968 + -15.9  -3.14564   CCGCCCGCAAAGACA           GATGCCGCC TGAG GGCGGCATC            TTGCTGGCAGCCTGG 100 14
 CHQ57_06425 NONE
 CHQ57_06430 1353538 .. 1353555 + -11.3  -5.24129   AGCGACAATGCAAAA             GGGATGC CTCG GCATCCC              TTTTTTGTGCACGGC 100 61
 CHQ57_06455 1358754 .. 1358772 + -11.7  -5.64274   GGGCTGTGACAAAAA             TGCCGCC ATTGA GGCGGCA             TTTTTTTATCCATCA 100 48
 CHQ57_06460 1360325 .. 1360341 + -13.7  -5.26316   CGCAAGAAAGCAAAA              GAGCGCC GTG GGCGCTC              TTTTTTATGGGCTCG 100 53
 CHQ57_06475 NONE
 CHQ57_06480 NONE
 CHQ57_06485 1367697 .. 1367719 + -19.2  -4.32436   ACTCCGCGTTATTGA           GGCGAGCCAG TCA CTGGCTCGCC           TTTTCCTCGTGCTCT 100 50
 CHQ57_06490 1370243 .. 1370256 +  -8.1  -6.28967   ATAGAAATAAAAAGG               CGACC AGAT GGTCG                TTTTTTTTATTTATA 100 61
 CHQ57_06505 1374571 .. 1374583 +  -3.5  -4.88228   GAATAAAGCATTGTA                TTTTT TGT AAAAA                TTTTTACTGTTAGCT  77 368
 CHQ57_06525 1377235 .. 1377248 +  -6.7  -3.93262   CGCCGCCGCGCGAGC               CAAGC GGAC GCTTG                TTTGCTATCTTGGCG  68 147
 CHQ57_06530 1377909 .. 1377936 +   -17  -3.86194   CTGAGGACCAATGTG        AGAGGAGGGCGC CCGT GCGCCCTCCTCG         TTTATCCGCGCCATT 100 63
 CHQ57_06535 1378931 .. 1378946 + -10.4  -5.37593   AAAGTGTGGTATCGA              CACGCC CCCG GGCGTG               TTTTTTCGTTTCAGG 100 52
 CHQ57_06555 1383669 .. 1383686 +  -6.9  -3.96224   GTTCAGCCGATAGAC             GGGCTGG GTCT CCAGCCG              TTTCTCCATGCTTTG  65 138
         cls NONE
 CHQ57_06570 1387054 .. 1387083 + -19.5  -3.90318   AGTCGGTGGCAGAAA       CAACAAAGGCTCC CTCG GGAGCCTTTGTTG        TTTCTGGCGTGGTGC 100 40
        ribB NONE
 CHQ57_06585 1389555 .. 1389572 + -11.3  -6.11644   ATCCATGCGAAAAAA             TGGCGCA TTCA TGCGCCA              TTTTTTTTTGCCTGA 100 40
 CHQ57_06600 1392077 .. 1392095 + -11.7  -5.28176   CCAACCTCACTTGAA             CCGGGCT CCTGA AGCCCGG             TTTTTTGTGGCTGCG 100 80
 CHQ57_06605 1393135 .. 1393165 +  -2.4  -3.88291   CGATGTTTGACGGGG       GGAGGGGCTGCC TCCTGTC GGTATCCCCCTC       TTTATAGCAGTACTC  54 31
 CHQ57_06610 1394124 .. 1394155 +   -19   -3.9398   TAAATTGTATTGAAA      TAAAACAGGCTCAC CTCG GTGAGCCTGTTTTA       TTTCTGGCGTTGTGC 100 69
 CHQ57_06625 1396857 .. 1396893 + -18.1  -3.43722   TCCTTTCAGTTTAAC    CAAAGCAAGAGAGGGCC AAT GGCCCTCTCTTGCTATC    TATTGTGTTGGTCAG 100 176
 CHQ57_06655 1404345 .. 1404366 +  -9.5  -3.34398   GCGCTTTACTTCCGC           GCGCACTGCT GGG AGCAGT-CGC           TGTTTGAAGCCAGCG  63 204
 CHQ57_06775 NONE
 CHQ57_06780 1425887 .. 1425905 +    -6  -3.52874   CTGATTGCAGTACTC             CGCTTAAG TAA CTTAAGAG             TGTTGTTATATAGGG  58 79
 CHQ57_06785 NONE
 CHQ57_06790 1427362 .. 1427381 + -13.6  -5.10064   GTCTGTTAAGCACAG            CGAGGGGA CCAA TCCCCTCG             TTTTTATGTGTTGCG 100 97
 CHQ57_06795 1428049 .. 1428066 + -11.3   -5.1167   GATTTGATGTCAAAA             GGACTGG CTAA CCAGTCC              TTTTTCTATTGCGTT 100 34
 CHQ57_06815 NONE
 CHQ57_06820 1431619 .. 1431655 + -13.2  -4.56597   TGCCGAGCGCTGTGA   TCACAAAAGGCGCCTGG GCGC CTGGGCGCCTTTT-TGA    TTTTTGCCGACCGCA 100 41
 CHQ57_06845 NONE
 CHQ57_06850 NONE
        cpaB NONE
 CHQ57_06860 NONE
 CHQ57_06865 NONE
 CHQ57_06870 1441578 .. 1441591 +  -3.7   -2.5805   CTCACCCTGTCTGAT               GCCGC GCGG GAGGC                CTTCTACGAGCTGGT  43 88
 CHQ57_06880 NONE
 CHQ57_06885 NONE
 CHQ57_06890 NONE
 CHQ57_06895 1445839 .. 1445855 +    -3  -2.62184   CTACCGGCCGGAGGG             GCAG-GA TGAG TCGCTGC              TCCTGTCGCCACCGG  40 17
 CHQ57_06900 NONE
 CHQ57_06905 1447750 .. 1447767 +  -9.8  -4.36931   AATAGTGTGAAAAAA             GGGGCC AGATCA GGCCCC              TTTTCCTATCCGTTG  90 36
 CHQ57_06915 1450111 .. 1450143 + -14.2  -4.64591   CCACACCGAGTGGGG     GGTGGGGGCCGTTGC GAAA GCA-CGGCCCCTATC      TTTTATCTGTCGTTC 100 44
 CHQ57_06925 NONE
 CHQ57_06930 1452631 .. 1452658 + -15.6  -3.21218   CCCGGGCAATATAAA        AAGAGGCCAGCC TTGC GGCTGGCCTCTG         TTGATCGTCACCGGT 100 71
 CHQ57_06950 1456317 .. 1456349 + -24.3  -3.73775   CAAAACGAACGCCAA      CAGAGAAGCCCCGGC CCC GTCGGGGCTTCTCTG      TTTGGTAGCCATCGA 100 134
 CHQ57_06955 1457449 .. 1457478 + -17.3   -4.3739   GTCTTGGTCTATCCA       CAATACCCCCGGT CCTG ACTGGGGGTATTG        TTTTATACCGCAATG 100 111
 CHQ57_07020 1470879 .. 1470892 +  -3.7  -3.75153   CTCAACGGGGCTGAT               CCGGC TCCT GCCTG                TTTGCCTTGGGACGC  56 49
        bioB NONE
        bioF NONE
        bioC NONE
        bioD 1477246 .. 1477257 +  -2.2  -2.98823   GGTCATGTCCTTTAT                CTTC ACAA GGAG                 TCTATATGAAGCGAA  42 122
 CHQ57_07055 1478173 .. 1478192 +   -15  -4.67038   ACCCTGAATAAAAAA            CGGCTGCC TTCG GGCAGCCG             TTTTGCTTTTCAGCG 100 63
 CHQ57_07070 NONE
        nifJ 1487590 .. 1487608 +    -8  -4.77165   TAATCGATATAGAGA             AGCGGGCT ATT GGCCCGCA             TTTTCTTATCGAAAA  90 51
 CHQ57_07110 1494166 .. 1494180 +    -5  -3.28327   CCAAGACGTCATTAA               TCAGTA CCT TGCTGA               TAGTTTTCTTCATGT  51 65
 CHQ57_07115 1494575 .. 1494607 + -15.5  -2.77899   CCACCATCCGCTGGT      AACTGAGGGCCCCGT GAT GCGGGGCCCTCAGCC      TGATTACTCCCACGC  95 24
 CHQ57_07140 1498772 .. 1498800 + -21.9  -3.99324   TCGGCAAACAGACAA        TGAGAAAGGCCCG TTA CGGGCCTTTCTCA        TTTCTCATGGTGAGC 100 42
 CHQ57_07150 1502047 .. 1502065 +   -16  -4.87665   CTGAACCAATGAAAA             CGCCGGCA AGC TGCCGGCG             TTTTTGTGAGTCAGA 100 54
 CHQ57_07160 1503774 .. 1503791 + -11.3  -5.64274   CCGGATACCGAAAAA             CCGATGC CAAG GCATCGG              TTTTTTTCTGCCTGC 100 54
 CHQ57_07195 1512305 .. 1512337 +  -4.5  -2.77901   AGCCGGCATCCGGCA      CAGTCCCGGCCGCGC CCA GCGCGGCCTACCCGG      TCACTTTGTGTTATT  46 40
 CHQ57_07200 1513226 .. 1513245 +   -15   -5.1383   AGCACATATTAAAAA            CGGCAGCC TTCA GGCTGCCG             TTTTTGTCTCTTGTT 100 128
 CHQ57_07205 1515337 .. 1515355 +   -16  -5.36441   GCGCACAATGAAAAA             CGGCAGCC AGT GGCTGCCG             TTTTTTGTCTCGCAA 100 286
 CHQ57_07225 NONE
 CHQ57_07230 1523112 .. 1523131 +   -15  -3.53012   CAACCGCTAACACCA            GGCGGGTC GCAA GACCCGCC             TTTCCCAAGGCCGAC 100 48
 CHQ57_07235 1525169 .. 1525185 + -10.1   -5.4505   TACGGATGCAAAAAA              GCCAGCG TTA TGCTGGC              TTTTTTATTGACCGG 100 96
 CHQ57_07245 1526382 .. 1526404 + -19.2  -3.30243   GGATCGCAAAAACAA           CAAGGGCCCC GCC GGGGCCCTTG           TTGTCAGAGGTAGCT 100 48
 CHQ57_07270 NONE
 CHQ57_07275 1530903 .. 1530923 + -12.6   -5.4111   TCGAATAGATAGCAA            GAGGAGCC ACAAC GGCTCCTC            TTTTTTATGGTTCTT 100 70
 CHQ57_07285 1532447 .. 1532463 + -15.1  -3.81146   AACGAGTAATAAAAA              CGGGCCC GCT GGGCCCG              TTCTTAATTGGCAAG 100 32
 CHQ57_07330 1541967 .. 1541987 +    -4  -3.20769   CCATCAGTTGCGGTA            GAGCAC CTTGGTATT GTGCTC            TTAATGACGTTGTTT  47 42
 CHQ57_07335 1543090 .. 1543100 +  -5.4  -3.14564   AGTGTGATTGATTCC                 TGTG TAG CACA                 TTGGTAACACGCTAA  52 117
 CHQ57_07340 NONE
 CHQ57_07345 1545160 .. 1545196 +   -19  -2.54523   TGTTGCTGAGTAGCA   G-GAAAAAGAGCTGGCG TATA CGCCAGCTCTTTTTCTC    TCAATTCCGATATAA 100 28
 CHQ57_07360 1548303 .. 1548321 +    -3  -3.34715   TTGAACGCACGTTTC             TTTGGCCG CTG CGGCTGCA             TGTTTCGCGGGGGTC  47 47
 CHQ57_07365 1552159 .. 1552178 +   -15   -4.2828   TAGGGCAGGGAAAAA            CGGGAGGC CTTG GCCTCCCG             TTTTCATGGGTGCAG 100 38
 CHQ57_07380 1553180 .. 1553196 + -13.7  -3.76839   GTCAGCATGCAAAAA              GGCGGGA AGA TCCCGCC              TTTGAATTCAAATTG 100 77
 CHQ57_07390 1556494 .. 1556515 + -11.5  -2.53164   ATGAGTGGACATGAC           ACCACCGCC AGCG GGCGGTGGC            ATTGCTGCTCAATGG  72 81
 CHQ57_07395 1558460 .. 1558486 +  -8.7  -3.33399   GTCACGCTTATTGAG        ATG-GCAGCCGC CCTG GCGGCTGCCCAA         TTCCCTTTCCTTCCC  65 27
 CHQ57_07400 1559647 .. 1559665 + -10.3   -5.1675   CCTGATGAGATGAAA             TTGGCCC TGAAT GGGCCAA             TTTTTTGCTGACTCC 100 36
 CHQ57_07405 1560810 .. 1560822 +  -6.2  -2.78715   GAGGTTTGCCAAGGC                GGGG CTCGC CCCC                TATCATGCCGCCATT  51 128
 CHQ57_07410 1561294 .. 1561308 +  -5.6  -5.07567   TGATGATGGATATTT               CCTGCT CAA AGCCGG               TTTTTTGCCGTATCA  85 64
 CHQ57_07420 1562485 .. 1562505 +   -14  -4.35116   GACTTGATAAAAAAA            CACCCCGC ACTTG GCGGGGTG            TTTTCGTATGGAGTG 100 67
 CHQ57_07435 1565732 .. 1565751 +   -10  -3.14881   GCGAGTTCCTTGCCG            CTGGCG-GC ATC GCGCGCCAG            TTCATCGCAGCGTTC  65 53
 CHQ57_07445 NONE
 CHQ57_07450 1568276 .. 1568289 +  -2.3  -3.38007   CCCGAAAGTTGGACA               CCCAA CGAG TAGGG                GTTTTCGTTTATATG  45 82
 CHQ57_07455 1569677 .. 1569693 +  -2.9  -2.87962   CCAATAAATGGGGTT              CACTTCA TGT TGAGGCG              GCTTTTTTATATGCG  42 46
 CHQ57_07460 1571399 .. 1571420 +  -4.4  -4.33274   CTGCCGGAGAGCATG           TCC-TGCCC CAGTT GGGCATGGG           TTTTCATGATCTCCC  68 441
 CHQ57_07475 NONE
 CHQ57_07480 1576853 .. 1576874 + -14.5  -3.61398   AAATATAAAAAAATA           CCAGGGTAG AATC CTACCCTGG            TTCTTCGCAGCAGCC 100 52
 CHQ57_07485 1577755 .. 1577765 +  -6.8  -4.07568   GCAGACTCAACTGGC                 TGGC AGG GCCA                 TTTTCGGCCACCAGA  68 298
 CHQ57_07495 1579868 .. 1579878 +  -6.8  -2.89881   ATATCGCCAGGAGTC                 GCAG ACC CTGC                 TGTGTGGCGTGGCTA  54 150
 CHQ57_07500 1581867 .. 1581889 + -12.1  -2.77013   CGCAGGTAAAAAAAA           TGGTCAACC TGGGT GGTTGACCA           ATTCTTCAGCAAATA  77 32
 CHQ57_07520 1586358 .. 1586381 +    -6  -4.24413   TAAGCAATCCTCAAA          TGGGGGTA TTTTGACC TGCCCCCA           TTCTTTGTTCCTGCG  70 77
        napF 1587077 .. 1587087 +  -5.4  -2.98823   GATCCGAGGCTCCAA                 CATG AAT CATG                 TATGTGTGAAGCAGG  50 21
 CHQ57_07530 1587456 .. 1587466 +  -3.2  -2.95789   GAGCCAGCGCGGCTC                 GTCA CAA TGGC                 TGTCATTGATGTGAT  42 108
 CHQ57_07535 NONE
 CHQ57_07540 NONE
 CHQ57_07545 NONE
 CHQ57_07550 NONE
 CHQ57_07555 1592762 .. 1592791 + -16.6  -3.01712   GGCTTTTAAGCCATC       TGAACAGACCGG GGTTGG CCGGTCTGTTCA        TATTCCCGCCAGCCA 100 32
        moaB 1593505 .. 1593530 +  -3.9  -2.77899   ACCCAGCCCTGCAAC         TTCGTGGCCCA TCTC TGAGTCGCGAG          TCATTGATCCCAACA  43 8
        moaC NONE
 CHQ57_07570 1594356 .. 1594370 +  -5.6  -3.70773   ACTGAGCTGTGCGGT               GGCGAC GAA GTGGCC               TTCTTCCCTCTCCCA  58 73
 CHQ57_07575 1595224 .. 1595240 +  -3.6  -2.85351   GTTCACTGCCAAGAC              CGGCCA TACCC TGGCCA              TCTCGTCTGCCGCCA  45 262
        modB NONE
        modC NONE
 CHQ57_07595 1598732 .. 1598751 + -13.6  -5.30686   GCCAGACAGCAAAAA            GCCGAACC AGCA GGTTCGGC             TTTTTTGTGGGTATT 100 50
 CHQ57_07600 1600415 .. 1600430 +  -2.4  -3.23853   ACTCACCAAAGGTAC              CCCGTG TTTG CGCGCG               TATTGGTTGAGCAGA  43 402
 CHQ57_07620 1604301 .. 1604330 + -14.3   -3.9777   AGGGCTGATCTGTCA       GGAGGCATGGCGC CATG GTGGCATGCCTCC        TTTCTCCCTCTTCAG 100 33
 CHQ57_07625 1606392 .. 1606420 + -24.7  -4.07133   ACCGCTGTTATAAAA        CAAGGCCCCGCCA AAT TGGCGGGGCCTTG        TTGTTTCTGGCGATC 100 66
 CHQ57_07635 1608946 .. 1608956 +  -2.4  -3.61398   AGGCGGCCCGGGTCA                 GGGC CAC GCCA                 TTGTTGGCGCGAAGC  49 273
 CHQ57_07645 1610273 .. 1610298 +  -2.6  -3.13403   ATCTGTTCGTCGAAG         GTG-TGCGC AAGTAATGG GCGCAGCAC         TCTTGCTACAAACCC  43 12
 CHQ57_07650 1611152 .. 1611166 +  -9.2  -4.90778   TGGACACACACAGAA               CCCGGT CAT GCCGGG               TTTTGTTTGCCTGCA  95 154
 CHQ57_07655 1612337 .. 1612353 +  -4.4  -4.56597   CAGCCAATAAGCGAG              GCAGGT CGCGC ATCTGC              TTTTTGAGCAAGGCA  70 31
 CHQ57_07660 1612780 .. 1612811 + -17.4  -2.88663   ATGAGCGATTCGGAT      ACAAACAGGGAGGC GGCG GCCTCCCTGTTTGC       TGTCTGCCCGTCACT 100 71
 CHQ57_07680 1619053 .. 1619070 + -14.1   -5.1356   ACGGGAATGAAAAAA             CGGCGCC TTCG GGCGCCG              TTTTTGTTGATGGCA 100 79
 CHQ57_07685 1619502 .. 1619531 + -11.5  -2.71405   CTCCTGCTCGTCACA       TGGCCATCG-GACA CCT TGCCGCGATGGCCA       CTTATCGTCTCTTGT  73 51
 CHQ57_07695 1620956 .. 1620970 +  -2.9   -3.6336   AGTGGTGTAGCTATG               TTCAT CGAAC ATGAA               TTGTGTGTGATGTGA  51 109
 CHQ57_07700 NONE
 CHQ57_07705 1625650 .. 1625664 +  -2.8  -3.44222   AAGTATCTGATGCTT               TTGCTG AAT CAGGAA               TTGCTTGCTCATTTG  49 355
 CHQ57_07710 1628577 .. 1628600 +  -4.6  -4.82901   ACGCTGCAGGGCGAG          TTGAACAGCCG GGT TGGCTG-TCAG          TTTTTATCACAAGCG  75 228
 CHQ57_07715 1629237 .. 1629248 +  -5.8  -2.53263   GTTGGAGGAGGTGCG                GGTG AGGG CACC                 TGGATTGACGATCAA  45 266
 CHQ57_07730 1633961 .. 1633979 +   -16  -5.04597   TGTTATCCCCAAAAA             CACCGGCC TCA GGCCGGTG             TTTTTGTATCTGCAT 100 72
 CHQ57_07750 1639119 .. 1639130 +  -5.8  -3.39018   CCAGCCAGTCCAGTG                CCTG CTGC CAGG                 TGTTTGGCATGGTCG  52 200
 CHQ57_07770 1641076 .. 1641093 +  -9.8  -3.93398   ATCGATAGCTGATAA             CGCCCC TGTCAT GGGGCG              TTGTTGTGTGTGCAT  81 55
 CHQ57_07775 1641749 .. 1641778 +  -8.6  -3.55444   GCAGCACAAGATTGT       CAATAACGCCCC TGTCAC GGGGCCTTGTTG        TTTCCGGCATCCAGA  67 74
 CHQ57_07785 NONE
        cydB NONE
 CHQ57_07795 1646192 .. 1646212 + -16.9  -4.52589   TTTGGATATGGAAAA            GGCCGACAC CCA GTGTCGGCC            TTTTGTCTGCACAAG 100 56
 CHQ57_07835 1652827 .. 1652850 + -16.8  -4.49352   TAAGAGCTCAAAGAA          GAGGCCGACA TCGC TGTCGGCCTC           TTTGTATTTTCATCT 100 172
        glpT 1657192 .. 1657212 + -11.1  -5.23316   AGGTAAACTGCCAAA            GGCCCCG CATCTGC CGGGGCC            TTTTTTCGTCTCATC 100 77
 CHQ57_07855 1658026 .. 1658048 +  -2.5  -4.69464   ACCCCTATCTGGCAC           CAGGCCGCT ATGAC GGCGGCCGC           TTTTTCCCCTGTTTT  66 51
 CHQ57_07865 NONE
 CHQ57_07870 1661010 .. 1661028 + -13.1  -5.15634   AAGACGGGAACGCAA             GCGGGGC CAGGT GCCCCGC             TTTTTTCATAAAATG 100 50
 CHQ57_07875 1662447 .. 1662472 + -16.3   -3.7347   TGATTGAACCATAGA         GGTATCACTGC CCAC GCAGTGATACC          TTGTTGCCTCTTGAA 100 62
        tyrA 1663685 .. 1663701 + -10.8  -4.65446   AAGCACCATAAAAAA              GGGGCC TTTTC GGCCCC              TTTTCTGTCTGTGCT 100 54
 CHQ57_07935 1678244 .. 1678267 + -12.5  -5.27335   CATTTTTGGCAAAAA          GACACCGCA CTTCGC TGCGGTGTC           TTTTTATTTAAGGGG 100 55
 CHQ57_07940 1679803 .. 1679827 + -11.3  -2.91239   GTAAGCATGCACTAC          CCGGGAGGCCG CAA CGGCCTCCCAC          TCTCTCAAATCTCTC  75 37
 CHQ57_07945 NONE
        malG 1682423 .. 1682460 +  -6.1  -2.73159   GGTGTGAAAGGTTAA   GTTTATGGCCGGGGGAG CTGA CTCCCCCCGCCGTCACG    ATTTGCAAAGATTCA  51 26
 CHQ57_07955 1683668 .. 1683685 + -12.7  -5.10461   ATTCAATGCCTTTTT             GCCGGTC GTCA GACCGGC              TTTTTATTGCCTGCC 100 66
 CHQ57_07965 1685599 .. 1685629 + -18.4  -3.85704   ACCGCTATTGCATGA       CAAAGAAGGGAGCC GTG GGCTCCCTTCTTCG       TTTCATGATTGCTGG 100 49
 CHQ57_07980 1688615 .. 1688642 +   -17  -4.63218   AGACAAGCGGTGAAA        CGGGGTGCGCCA GCAA TGGTGCGCCCCG         TTTTCTTCCCGGGCG 100 47
        arsC NONE
 CHQ57_07995 1690103 .. 1690119 + -13.7  -5.24129   GCCTTTATCTGCAAA              CCGGACC CTG GGTCCGG              TTTTTTATGGCCGCA 100 57
 CHQ57_08010 NONE
 CHQ57_08015 1694089 .. 1694124 + -14.1  -2.61274   CGTCAGTCGTCATAT    CGGGCCCGTTATCTCC CGCAA GGAG-TGATGGGCCCG    CTTGATTGCAATGGA  84 200
 CHQ57_08020 NONE
 CHQ57_08025 1695904 .. 1695923 +  -2.1  -4.17556   CCTATGCTGGCAACA            CTGTGCA CAAACA TGCATGG             TTTATTGACAATCTC  58 273
 CHQ57_08030 1696565 .. 1696583 + -11.7  -4.41353   TCCTCTTGTTGCCAG             GCCCCTG CTCGT CAGGGGC             TTTTGCTGTCTGTGG  95 48
 CHQ57_08050 1703017 .. 1703034 + -12.7  -5.27206   CCGCTGCCGTGAAAC             GCCGACC TCAG GGTCGGC              TTTTTGTTATCTGTC 100 49
        pbpC 1710399 .. 1710429 +  -4.7  -2.90496   GGTGGAGTTTCGGTT      GGAAAATCCCTCCT GAAG AGG-GGGATCCTCC       TGATTTGGCCGGGCA  47 10
 CHQ57_08070 1713094 .. 1713125 + -14.7  -3.65351   GGGTGACGTTTCGAA      TAAAAAATCCGGC CAATGA GCCGGATTTTTTA       TTTCACTGCGCATCA 100 46
 CHQ57_08085 1715800 .. 1715820 + -11.1  -5.19328   AGCATATGCTCATTT            TAGGCCGGA TTT TCCGGCCTC            TTTTTATTGTGCCGT 100 205
 CHQ57_08090 1717193 .. 1717223 + -16.3  -3.92075   ACTTCGACGCTACTT      CA-ACATGGCGGCC CTCA GGCCGCCATGTCTG       TTTCTCCATCCCCCT 100 104
 CHQ57_08095 NONE
 CHQ57_08100 NONE
        fliS NONE
 CHQ57_08110 NONE
 CHQ57_08115 1721899 .. 1721917 + -10.3  -4.24726   ACATGACAATAAAAA             TGCCGAC ATTGC GTCGGCA             TTTTAGAATTATTCT  85 35
 CHQ57_08195 1737187 .. 1737218 + -20.4  -3.53091   TCCCCGTTGGATTGA      TAACAAAACCCGGC TCAT GCCGGGTTTTGTTA       TTTGGCAAAGACAGT 100 86
 CHQ57_08205 NONE
 CHQ57_08210 1739819 .. 1739840 + -11.6   -5.3236   TCGCTAAGCTGACAA           GATGGCCC CGTGAC GGGCCATC            TTTTTTCTCGCTTCT 100 34
 CHQ57_08215 NONE
 CHQ57_08220 NONE
 CHQ57_08225 NONE
 CHQ57_08230 1744939 .. 1744959 +    -6  -3.34501   AAGCCAAGGGAGTGT            CCTGCTCC CGGCC GGTGCGGG            TTCTCCGCCTTGTAT  56 189
 CHQ57_08235 1746289 .. 1746319 + -25.6  -3.61398   GTGCTCCTTGCATAA       CGAAGAAGCCCGCC ATT GGCGGGCTTCTTCG       TTATTGCGCCCAGCC 100 49
 CHQ57_08245 NONE
 CHQ57_08250 1750524 .. 1750545 + -14.5  -4.89233   TCAAGCAAAGAAAAA           GCCCGTCAT CGTG ATGACGGGC            TTTTTGCTGTTGGTA 100 74
 CHQ57_08265 1751876 .. 1751900 + -17.2  -4.36914   ACAGCATAAAACAAC          GCAGAGCGCC CAGGT GGCGCTCTGC          TTTTATCCGGCCGGG 100 71
 CHQ57_08270 NONE
 CHQ57_08275 1754661 .. 1754688 +    -7  -3.85092   AAACTAATGTGACGA        GGCGGATGACTCA TTT TGGG-CATCAGCC        TTTAATCTGGGTGGT  66 66
        gcvT NONE
        gcvH 1756621 .. 1756647 + -20.9  -4.17296   GAAGAGTAATGCCCC         CGGGCCCTGCC AACAC GGCAGGGCCCG         TTTGTATGTCTGCCA 100 32
 CHQ57_08290 1759836 .. 1759861 + -19.1  -4.06687   GCAGCCCGATAAAAT         CAAGGCCACCC CAGC GGGTGGCCTTG          TTGTTTATGGCGAAT 100 67
 CHQ57_08300 1761645 .. 1761680 + -17.8  -3.54741   CTAGCATTTCTCCAC    T-CAGAACCCCCGATGT ACT GCATCGGGGGTTCTGTA    TTTCAACGCATGATG 100 89
 CHQ57_08335 1767246 .. 1767280 + -15.8  -4.29472   AGCTGGCGGATGACA     TGGTCTGAGTTCGGTA CTG TACCGGGCTCAGGCCG     TTTAGTTTTACTTTG 100 129
 CHQ57_08350 1770707 .. 1770725 +  -2.4  -3.29829   TGCGTGGAGAACGCC             TGCCAG ATAATGC TTGGCA             TTCTGCCCCGGTGTG  44 469
 CHQ57_08365 NONE
 CHQ57_08370 1773376 .. 1773416 +  -3.3  -3.69216   GCCGACGAAATCCTG CGACTGAAACGACTCCTG GCCGAA CAGGAGTCACT-CAATCG  TGTTTTGCATGCCAG  51 86
 CHQ57_08400 1777257 .. 1777269 +  -4.7  -3.38812   TCGGAGTTGCGGGTT                GGGTG TTG CCCCC                TGTTGTTCGCCGAGG  51 292
 CHQ57_08410 1778248 .. 1778258 +  -6.8  -2.78384   TGGTCAGGTGATGGG                 CGTG CGA CACG                 TATACTGGCCAGACG  53 102
 CHQ57_08415 1780055 .. 1780076 + -17.3  -3.55444   TATACCAGCAATAAG           TCGGGGCCC TGTT GGGCCCCGA            TTTACGCCATGGCGC 100 204
 CHQ57_08455 NONE
 CHQ57_08460 1788233 .. 1788249 +  -2.1  -2.70923   CACGGTGACATAGTC              GCCCGCA AGG TGGTGGC              CTTATGATATTGCGA  39 2
 CHQ57_08465 1788533 .. 1788557 + -20.1  -4.07133   CCATCATGCAATAAA          CAAGACCCGCC ATC GGCGGGTCTTG          TTGTTTCTACGGGTG 100 63
 CHQ57_08490 1793287 .. 1793311 +  -9.9  -4.21812   CTCTTTGCTCGCCCG          CCAGCAACGCT GGC AGCGGGGCTGG          TTGTTTTGCCTGACG  85 152
 CHQ57_08500 1795206 .. 1795242 + -11.6  -4.65747   TCGACCGACTGCAAG    AAGAAGGGGCCGGTAT CAACA ATACCGGCCCCTTTGG    TTTTATTCGCAGTTC 100 92
 CHQ57_08510 1797013 .. 1797042 + -15.1   -4.3351   ACAGTACCCGGCCAT       AAAGAAACCCGCC ATTC GGCGGGTTTCTTG        TTTATTGCATTTTGT 100 186
 CHQ57_08540 1804074 .. 1804089 + -11.8  -5.04265   CACTGCCTTGCCAAA              CCCCGG TTCG CCGGGG               TTTTTCGTATTTTTT 100 87
 CHQ57_08545 NONE
        carB 1809128 .. 1809159 + -11.6  -5.00616   ACACTTGCGAACCCT      GAAAAACCCCGCCA GCGA TGGCGGGGTTTCTG       TTTTTTGGCGCCAGC 100 88
        leuA 1811289 .. 1811315 + -20.9  -2.52464   GCTCATCCGTTTGCA         GCAGCCCCGCC CATCC GGCGGGGCTGC         TCGATTGCGCCAGCG 100 58
 CHQ57_08560 1812676 .. 1812718 +  -4.2   -5.0916   TTTTCTAATCCAATC AGCCGCCATCAATACGAAT CGTCAC ACTTGTGT-GATGGCGGCG TTTTTATATTCCCAA  79 54
 CHQ57_08580 1816568 .. 1816594 +  -6.5  -4.33808   ATTCGCTGAGTGATA        TCCGGGG-GAGC GCAG GCTGGCCCCGGG         TTTTCCATTGATTTA  72 32
 CHQ57_08585 1817491 .. 1817503 +  -2.7  -4.07687   AACCCATTATGAGAT                TTGAA TCG TTCGA                TTTTGCCCCCGAGAT  58 307
 CHQ57_08590 1818844 .. 1818866 + -16.4  -2.77701   GGGCGATTTTGTATA           TAAAGGCGCC ACT GGCGCCTTTA           TGCTGTTGATGACCT 100 90
 CHQ57_08595 1819593 .. 1819611 + -13.1  -5.24129   AATGTTGTTCCCAAA             CCCCGGC CTGGC GCCGGGG             TTTTTTATGCGCCAG 100 69
 CHQ57_08600 1820990 .. 1821005 + -11.8  -4.77036   ACTGATCCGCTGACA              GGGGCC GCAA GGCCCC               TTTTTGATGCTGAAG 100 36
 CHQ57_08605 1821465 .. 1821478 +  -3.1  -3.76224   TGGCGGCACCCTAAG               C-GGCA TCA TGCCCG               TTTGCTGCGTCCAGC  53 27
        soxR NONE
 CHQ57_08625 1823674 .. 1823695 + -17.3  -4.15044   ATGTCACCTAAAAAA           CAGCCCCGC AGAT GCGGGGCTG            TTTGTTGGCACAAAG 100 64
 CHQ57_08640 1831345 .. 1831355 +  -2.4  -3.58343   ATCAAGCACTTTCAT                 GCCG TAC CGTC                 TTTGGGCGTAATGCC  49 220
 CHQ57_08645 NONE
 CHQ57_08650 NONE
 CHQ57_08655 1836500 .. 1836530 + -19.8  -3.59202   TTGATGCGAGTGAAA       GGGATGGTCGCAGC TGT GCTGCCACCATCCC       TTGTCTCTAACGGTC 100 58
 CHQ57_08660 NONE
 CHQ57_08665 1839300 .. 1839314 + -12.8  -5.60993   CGATATTCACAGTGA               GGCCCC ATA GGGGCC               TTTTTTTATGCGAAA 100 46
 CHQ57_08675 1844936 .. 1844955 +  -3.4  -3.75153   GCTGGAGCGGTACGA            GCGTGGCG GGTG TGCCGGGC             TTTACCTTGCCAGCG  53 425
 CHQ57_08685 1851654 .. 1851674 +  -5.4  -5.76633   CCACGGGCATAATGA            CCTCACTC TAATT GATTGAGG            TTTTTTTATATGTGG 100 52
 CHQ57_08690 1852423 .. 1852450 + -17.1  -4.40561   GTCCCTCACCTGTCC        CAAGCCCGAGG CTCACC CCTCGGGCTTG         TTGTTTTTACGGCAA 100 60
 CHQ57_08700 1854694 .. 1854723 + -12.1  -4.64383   CGCTAGCCACAAAAA       CGGAGCCACATGC TACT GCATTGGGCTCCG        TTTTCATTTCTGCTT 100 35
 CHQ57_08710 1858353 .. 1858373 + -18.3  -5.30339   CTGTGATAATAAAAA            CGGCGCCCT GAC AGGGCGCCG            TTTTTATCTTTTAAT 100 59
 CHQ57_08715 1860148 .. 1860187 + -12.2  -2.62184   AGCACCAGGCTGCCG  GCCGCGCCATCGGCCAG GGTATTG TTGGC-GATGGCGGGGC  TGGTGTAGCCGAAGC  68 522
 CHQ57_08745 1867759 .. 1867770 +    -3  -5.26247   TGATATACGCATAGA                CTAT GTTA ATAG                 TTTTGTTTATTTTGG  82 120
 CHQ57_08755 1869824 .. 1869843 +   -15  -5.08601   TCGCACCAACAAAAA            CGGGCACC AGAA GGTGCCCG             TTTTTGTTGGCATGG 100 66
 CHQ57_08765 1872046 .. 1872082 +  -7.7  -2.96152   TTCAATAGATCCAAA    CGGCTGGGGTAAGCGGC TTC GACGCCAGCCCCGCCCG    TCTCTGGCTTGGTGT  58 47
 CHQ57_08770 1873287 .. 1873312 +  -7.5  -2.67364   GCGGTGTGGATGTGA         C-CGGGGCCGCA CTC TATGGCCCCGAG         AATTTTTCGTGATAT  56 104
 CHQ57_08775 1875650 .. 1875679 + -22.3  -3.03771   TGGCGTTAGGACCTT       GAGAAGGGCAGCC TGCG GGCTGCCCTTCTC        TATTGGGGACTGTGC 100 50
 CHQ57_08780 1876582 .. 1876594 +  -3.3   -4.7497   TGCCGGACTCGGCAC                CGGGT ACG ACCAG                TTTTTAGTAACTGGC  71 6
 CHQ57_08785 NONE
 CHQ57_08790 NONE
 CHQ57_08795 1879838 .. 1879869 +   -11  -5.47821   CAATGAGATAAAAAA      TACCGCGCTTCATTT CAC AGATGG-GCGCGGTA      TTTTTTTAGATGCAT 100 46
 CHQ57_08815 1883500 .. 1883524 + -17.3  -4.87626   CCGCCAGACATTGAA          GCCCATCTCAT TTC ATGAGATGGGC          TTTTTCGTATTCGCG 100 35
 CHQ57_08835 NONE
 CHQ57_08840 1891156 .. 1891178 +  -9.1  -3.28714   CAGGTTGACAAAAAG           CCCGACCAA GGCTG TTGGCCGGG           TCTTATACTGCGTCT  69 86
 CHQ57_08845 1892913 .. 1892938 + -14.8  -3.18274   TCCCACCAAAAGCAA         CAAGGCCACC CATAGC GGTGGCCTTG          TTGCCTTGCACTGCC  95 52
 CHQ57_08855 NONE
 CHQ57_08860 1896013 .. 1896059 + -23.1  -3.12668   CGACTGTAAGGCAAA GCTGACAGCCCTGCGGGTCGCC ATGG GGCGATCCGCAAGGCTG-CGGC TTGAATGTCACAATC 100 32
        hppD NONE
 CHQ57_08870 NONE
 CHQ57_08875 NONE
        maiA 1900479 .. 1900502 +  -7.4  -2.71791   GCACGTAGAAGTGGG          GC-ACCCCCAG GTA CTCGGGGTAGC          GTTTCAGGAAGGGCT  57 258
 CHQ57_08910 1907027 .. 1907051 + -15.7   -4.3467   CCACACCCCAAAAAA          CGCGCCCGC ATCAATA GCGGGCGCG          TTTTACTGTGCGGCT 100 58
 CHQ57_08930 1914374 .. 1914384 +  -2.4  -2.83012   TCCGCTGCAGGCGTT                 GCTG GAA CTGC                 TCTGATGCTGACCTT  39 10
 CHQ57_08935 1914892 .. 1914922 + -14.6  -3.56844   ATGCGATTATTTCCA       TGGGGCCTTGCCGC TGT GCTGCCGGGCCCCA       TCTTTGCTTCCTGCC 100 40
 CHQ57_08940 1915554 .. 1915574 +  -3.1  -4.87626   AAGACAGCAGAACAA            AGTGGCGCT ATA ATCGCCGCC            TTTTTGCTATTCCGC  71 136
 CHQ57_08945 1917525 .. 1917543 +   -16  -5.28176   TTGCATTGATAAAAA             GGCCGCTC ATC GAGCGGCC             TTTTTTGTGCCTGCC 100 48
 CHQ57_08950 NONE
 CHQ57_08955 1920320 .. 1920337 + -12.7  -4.26188   CTTTATCAATGAAAA             GGCGACC CCGA GGTCGCC              TTTTGCATGTCTGCA  95 99
 CHQ57_08975 NONE
 CHQ57_08980 1925695 .. 1925726 + -15.4  -3.19522   GCCTGTAGACTGAGA      TGAAAAAAGAGCGC CGCA GCGCTCTTTTTTTA       TTGGGTGTTACCTGA 100 43
 CHQ57_09025 NONE
 CHQ57_09030 1934523 .. 1934547 +  -9.9  -3.19192   TTCTACAGAATGGAA          CAAGCGACGAG CTC CCCGCCGCTTG          TTGCCTTACATCGCC  70 180
 CHQ57_09040 1937435 .. 1937454 +   -15  -5.60993   TGACTCAGGTGAAAA            CAGGGCCC TGTG GGGCCCTG             TTTTTTTGTCACCAA 100 44
 CHQ57_09045 1939086 .. 1939101 + -10.4   -4.7254   GACAGATAGCAAAAA              GGCTCC CGAA GGAGCC               TTTTTCATGAGCCGT  95 57
 CHQ57_09055 1940962 .. 1940981 +  -9.2  -4.52589   TTTTCACCATAAAAA            AAGGCGCC ATCA GGCGCCTG             TTTTCTATGGGGGAG  90 49
 CHQ57_09115 1956703 .. 1956721 + -11.7  -5.44198   GTCTGTTTTGTCGGA             GCCGGTC CTCGT GACCGGC             TTTTTATTGTTTCTT 100 46
 CHQ57_09120 1958612 .. 1958631 + -16.4  -3.36273   GTCGCATAACAAGCA            GGCCCGCC AGAC GGCGGGCC             TTAGTATTAAAACCG 100 53
        oppB NONE
 CHQ57_09130 NONE
        oppD 1961542 .. 1961553 +  -2.2  -2.68823   CGCCAAGGAGGTGAG                CGTA TGAA TGCG                 GTTATATGCGGCCAG  38 19
 CHQ57_09140 NONE
 CHQ57_09145 1962670 .. 1962694 + -14.2  -3.73399   GTGTGAGCATCCGAT          ACGGGGCGCC CAGGT GGCGCCCCGA          TTCATTTTGCATTTG 100 41
 CHQ57_09150 1963917 .. 1963938 + -15.9  -3.79519   AACGGTGAATATGAA           GAGGGCTCC CGCG GGAGCCCTC            TTTGCTGGTGAGATT 100 33
 CHQ57_09160 1965856 .. 1965875 + -16.4  -3.70546   AATACAGATAAAAAA            CGGCCCGC ATCA GCGGGCCG             TTCTGCTTTTCGTGG 100 61
 CHQ57_09185 1970641 .. 1970667 + -19.5  -3.90744   CTGCCACCAGATAAA         CAAGGCCCCGC CAACA GCGGGGCCTTG         TTGTTTCAGCGAGAG 100 51
 CHQ57_09195 1973342 .. 1973376 +  -3.5  -3.16785   CTGTTGCTGGCCAGC    ACC--CTGCTGGGGGGC TGC GCCTCCCAGTGGCAGGA    TATGTTCGTCTCCTA  47 67
 CHQ57_09200 NONE
 CHQ57_09205 NONE
 CHQ57_09210 1975777 .. 1975790 +  -3.1  -2.62263   AACAGGCGAAGAAAT               CCA-CC TTT GGCTGG               TGATCTGGCAGAGCT  40 9
 CHQ57_09215 NONE
 CHQ57_09220 1977503 .. 1977527 + -12.1  -2.70298   CATTGCAAGGTCAGC          GTGGCGAGGTG ATG CGCCTTGCCGC          CTTGTCCTTGGCGGG  77 51
 CHQ57_09225 1978056 .. 1978076 +  -8.9  -3.13403   CCCAGAGCTATCTCG            CCTGATCCC GAT GGGGTCCGG            TCTTACTGCACAGCC  63 21
        secD 1980082 .. 1980117 +  -5.3  -3.21924   GCCTGCTCCGCGCCT    GC-GTCACGCGCTTCC GGTTG GGAAGCCCGAGTCAGC    TGTTGTCGAGGATAA  52 86
        secF 1981148 .. 1981170 + -17.8  -4.69214   AGGTGTGAATAACAA           GAGGGAGGCA TTG TGCCTCCCTC           TTTGTTTATTGGCTG 100 122
 CHQ57_09240 1983149 .. 1983175 + -19.6  -5.24989   TATGCGCATAAGAAA         TCCGAAACCAGC CAA GCTGGTTTCGGA         TTTTTTCATATCTGG 100 128
 CHQ57_09250 1986846 .. 1986872 + -19.6  -5.07567   TGACAATCACATAAA         TCCGAAACCAGC CAA GCTGGTTTCGGA         TTTTTTCACATCTGG 100 131
 CHQ57_09370 2009752 .. 2009762 +  -4.6  -3.37881   GCAGGTCCGGCATGG                 GGGT TGT GCCC                 TTACCTTTGTGTTGG  51 177
 CHQ57_09375 2010118 .. 2010138 + -13.3  -5.27335   CTCGTTAATGCAAAA            CGGCATGGG TTT TCCATGCCG            TTTTTGTTTGCGCGC 100 46
 CHQ57_09385 2011598 .. 2011631 +  -7.4  -3.84674   AGGCATAAAGCCGTA     TGG-GGGTTGCCGCC CCCTT GGCGGCAAGCGGCCA     TTATTCTGATAACCT  69 33
 CHQ57_09390 2012420 .. 2012438 +  -3.8  -3.35813   AACTCGGATAGTCTC             CTGCCA CTGGGGC TGGCGG             TTAATTCAGATCCCC  49 66
 CHQ57_09395 2014340 .. 2014350 +  -5.4  -3.01924   ATGGAAGATTTCCAT                 CACT ACC AGTG                 TATTCACCGCCAGTG  49 392
 CHQ57_09410 2019357 .. 2019376 +   -15  -4.72497   TGCCATGAAATGAAA            CAGGGCGC TTCG GCGCCCTG             TTTTGTTACTGCATG 100 44
 CHQ57_09435 2024778 .. 2024800 +  -3.2  -5.47218   GCCGTCATCCCCCTC           CGGGATGGCC TTG GGCCGCTGCG           TTTTTTTGGGTAGAG  91 54
 CHQ57_09440 2025669 .. 2025693 +  -3.6  -3.07935   GGATAATAAATCGTG         GGTAAGCTCTGC GGT GCGG-GCT-ACC         TTAAGTGGGTAAGCT  46 129
 CHQ57_09445 NONE
 CHQ57_09450 2027074 .. 2027102 +  -5.4  -3.44051   GGTATCTGATCCGTG       CAGGGGGAGA-AT TCTT ATGTTTTCCCCTG        TTGTCGTCGTCAGGG  56 32
 CHQ57_09460 NONE
 CHQ57_09465 2030374 .. 2030392 +   -16  -4.83169   GAATCAATAAAAAAA             CGCCTCCC GAT GGGAGGCG             TTTTTATGCCAGCGT 100 62
 CHQ57_09475 2032029 .. 2032050 +  -8.7  -3.90744   GCTGACATCCGGTCG           TCTGCACCA AGGA TGGCGCAGA            TTATTTAAAACAGCC  74 36
 CHQ57_09480 2033801 .. 2033819 + -13.1  -5.47159   CTTGATGCAAGAAAA             GGGCGGC TTCAC GCCGCCC             TTTTTTATATTGGCG 100 43
        ihfB 2034171 .. 2034188 +  -9.9  -5.98675   AATAATGCAGAAAAC             GGCATAC TTGG GTATGCC              TTTTTTGTTTTTGTG 100 36
 CHQ57_09490 NONE
 CHQ57_09495 NONE
        pyrF 2036600 .. 2036629 + -12.2  -3.21276   GATAAGGTTTGAAGG       GGACAGGCCG ATTGACCGCC CGGCCTGTCC        TGTTCTACCGGCACG  81 36
 CHQ57_09510 NONE
 CHQ57_09515 2038604 .. 2038616 +  -2.6  -2.78715   TGAGCCTGCGTCTTG                CCCT TGCTT GGGG                TATAATCCGCGACTT  39 38
 CHQ57_09520 NONE
 CHQ57_09525 NONE
 CHQ57_09530 2040128 .. 2040173 + -16.5  -2.91695   CTGATGGCGTTATAT CAGG-CAATAAAAAAACCTCGC GCT GCGAGGTTTTTTTATTGGTCGG TGATTTGCCACTCAG 100 37
 CHQ57_09540 2042775 .. 2042798 + -12.4  -4.37658   AAACACACTTGAAGC          GCAAGGGGCC CATG GGCCCCTTGG           TTTTGTCCGGGGCTT 100 49
 CHQ57_09545 2043459 .. 2043475 + -10.8   -5.4505   AGGAATGACAGCAAG              GGCGCC TCTAT GGCGCC              TTTTTTGTTGCCGCC 100 47
 CHQ57_09555 2045505 .. 2045516 +  -7.2  -2.52543   GCCATTGACGCAGGC                GGGG CTTT CCCC                 TAAATTACGCCCCGT  52 82
 CHQ57_09560 2045781 .. 2045799 + -13.2  -5.42514   CACCGCCAAATATAA             CCCGTTGA ATT TCAACGGG             TTTTTTCATTTCTAG 100 33
 CHQ57_09565 2047277 .. 2047287 +  -2.6  -3.06261   ATTTGACAATTTATT                 TATT TCA AATA                 TATTGAAGGTTGACA  42 141
 CHQ57_09570 2048571 .. 2048585 +  -3.6  -3.10641   CTACTGTGATTCATA               TCGATA TAT TATTGA               TTCGATAATACGTTA  46 47
 CHQ57_09575 2049859 .. 2049871 +  -4.8  -5.24531   CTTGCGAACGGAGTG                GGGT GGAGA ACCC                TTTTTTATGGAGGGT  87 277
 CHQ57_09580 2051509 .. 2051529 +  -9.7    -5.252   ATAAATAGCCCACAA            GCCCTGC CGACAAA GCAGGGC            TTTTTTCTGCCCGTC 100 33
 CHQ57_09620 2063234 .. 2063275 + -27.7  -3.57144   TCCCTCACCGCCAAA TAACAGAAAAGGGCCTGTC GCAA GACAGGCCCTTTTCTGTTA  TTTGGCAATAGGAAC 100 337
 CHQ57_09640 2068236 .. 2068261 + -16.2  -5.28176   CAGATGAATTAAACA         TCCGGCCCCT GACGTA AGGGGCCGGA          TTTTTTGTGGCTGCG 100 48
 CHQ57_09670 NONE
 CHQ57_09675 2076315 .. 2076325 +  -4.6  -2.59431   GGCGAGCTGGTGAAA                 GCCG CCG TGGC                 TGCCTTGTAAACGAA  45 5
 CHQ57_09680 2076696 .. 2076714 + -10.3  -4.77157   CCTGAAGCATGACAA             GCCATCC ATCAC GGATGGC             TTTTTAATGAGTTAA 100 36
 CHQ57_09685 2077648 .. 2077667 +  -3.6  -3.17194   CTATTTATTCGCCTG            CCATATTC CATC GAATATGA             TTGGATTGAGAAAAT  47 108
 CHQ57_09690 2080034 .. 2080058 +  -2.1  -3.97834   AATGCATTGAATATA          TACCTGATGAT TAT GTCATCTGATA          TTTATGGTGGCCTTG  54 126
 CHQ57_09695 2081403 .. 2081431 + -13.2  -5.14563   TACGGCCAACAGCCA        GATCCCGGGCAA GCAGA TTGCCCGGGATG        TTTTTTCATGCAGGC 100 135
 CHQ57_09710 NONE
 CHQ57_09715 NONE
 CHQ57_09720 NONE
 CHQ57_09725 NONE
        hybD NONE
 CHQ57_09735 2089961 .. 2089982 +  -3.7  -3.59979   CAACCGGCATAGTTG           CTAGGTTTC ACGC GAAATCAAG            TTTAGAATAGGGGCC  53 29
 CHQ57_09740 2091681 .. 2091694 +  -2.3  -3.18199   AACCTCTCTGACTGG               CGGTG GACG TGCCG                TTAAGTTCGCCCTTG  43 8
 CHQ57_09745 NONE
 CHQ57_09750 NONE
 CHQ57_09755 2094258 .. 2094272 +  -4.2  -3.86835   AGTTCAACACGCTCT               TCTCTG TGC CGGAGG               TTTCCTGATGTTTGA  58 3
 CHQ57_09760 2095189 .. 2095210 + -11.5  -4.34402   TCCACAGATAAAAGA           GAGGGAGGC ATCA GCCCCCCTC            TTTTGCTATCCGCCG  95 293
 CHQ57_09845 2114264 .. 2114279 +  -4.6  -4.51378   CGTGCCTGTCAGCCG              GTGTCG AGCT CGTCAC               TTTTGTCGTGTCGAT  70 170
 CHQ57_09855 NONE
 CHQ57_09860 2116697 .. 2116748 +  -3.6  -2.88544   TGGCACAGGGGTAAA GCATCAGATG-GCGTGCGCAGGCC CTTGCT GGCCGCCGCTTGCGCCTCTG-TGC TCTCTCCCCCTGACA  45 27
 CHQ57_09865 2118993 .. 2119024 + -16.6  -2.65832   GTCGTTAAATAAAGT      GGATCCAGGCTCTG TTCA CAGGGCCCGGATCC       CTTCATCCTTTTTTC 100 43
 CHQ57_09870 2119627 .. 2119645 +  -7.4  -4.33417   AAGGCTGGCTTGGTT             GTAATGCC AGT GGCACTAC             TTTATTATGCGTCAG  78 196
 CHQ57_09875 NONE
 CHQ57_09880 NONE
 CHQ57_09885 2123595 .. 2123608 +  -9.5  -5.30616   TCACTGTTTCTCAAA               CCCGC CTCG GCGGG                TTTTTGTTTGGCTGC 100 54
 CHQ57_09890 2125682 .. 2125701 + -13.6  -5.71712   AGGCATGATGTTTCG            GCCCACTG CATG CAGTGGGC             TTTTTTTATGTGGCG 100 33
 CHQ57_09895 2125926 .. 2125937 +  -3.6  -2.97382   AACCAATCAATAGGA                GCGT GTAT GCGC                 ATTGTTCTGTTGGGG  45 66
 CHQ57_09900 2126622 .. 2126638 +  -7.2   -4.2528   TGTGCCATTAGACAA              GGGTCC ATGCA GGGCCC              TTTCTTGCATTCAGA  72 71
 CHQ57_09905 2127671 .. 2127685 +  -3.5  -2.64651   ATGGTCTCTTTCATG               TGCCG CCAGC TGGCA               TAAGTTTCCCGCGTT  43 40
 CHQ57_09910 2128203 .. 2128237 + -15.8  -4.29472   AGCTGGCGGATGACA     TGGTCTGAGTTCGGTA CTG TACCGGGCTCAGGCCG     TTTAGTTTTACTTTG 100 108
 CHQ57_09920 2131073 .. 2131098 + -15.5  -3.22475   GTTTTCCCGTATCGA         GAAAGGCGTCC AACA GGGCGCCTTTC          TGTTATGGGGCTGGA 100 50
 CHQ57_09925 2132845 .. 2132857 +  -4.7  -4.64657   ATCGCACTTAATGAG                GGGGG CTC CCGCC                TTTTTAGGGATTTGA  72 30
 CHQ57_09930 2133371 .. 2133392 + -10.9  -5.93809   GGCAGCAACAAAGAA           CCGATATCC GCAA GGATGTCGG            TTTTTTTTGTGGCCC 100 80
 CHQ57_09935 2134219 .. 2134233 +  -2.8  -3.59979   GAGGGCGGGATCCAG               CTTGAT GTA ATCGGG               TTTGAGCTCACGAAA  49 252
        glgC 2137101 .. 2137119 +   -16  -4.60949   CGTTGTAATGCATAA             GGGAGCCG AAT CGGCTCCC             TTTCTTTATGGTGTG 100 66
 CHQ57_09960 NONE
        entE NONE
 CHQ57_09970 NONE
 CHQ57_09975 NONE
 CHQ57_09980 NONE
 CHQ57_09985 NONE
 CHQ57_09990 2155808 .. 2155840 + -18.5  -3.35046   TAGCATTTCTCCACT      CAGAACCCCCGATGT ACT GCATCGGGGGCTCTG      TATTTCAACGCATGA 100 99
 CHQ57_10005 2158996 .. 2159054 + -17.7  -2.60798   CGCGCCACCTGCTGA CCAGCATCACGGGATCAAAAAAACCGTC ATCA GACGGTTTTTTTGATCCTGCGTT-CAGG CTTGCTGCTTTATGG 100 53
 CHQ57_10035 2166447 .. 2166467 +  -3.2  -3.40403   GCAGGTTGAGGCTGT           GCAG-CTGC ATCA GCAGGCCGC            TTATGGTGGAGCAGA  47 172
 CHQ57_10055 NONE
 CHQ57_10060 2171888 .. 2171906 + -10.3  -4.65895   GCACATTCCCCGCAA             GCCCTGA CCCGT TCAGGGC             TTTTTCGATGGCAGC  95 96
 CHQ57_10065 2173149 .. 2173175 + -21.6  -5.09895   GTTTTTCCCCAAGTG         CAGGCGCCGGGG ACT CCCCGGCGTCTG         TTTTTTCAGTGGATC 100 44
        aroA 2174595 .. 2174612 +  -9.8  -5.41143   GTTTGATCTCTTGAG             GCCCGC CTTTGC GCGGGC              TTTTTTTCAGGCATG 100 35
 CHQ57_10075 2175931 .. 2175950 +   -15   -4.2828   GCAAGAAACTAAAAA            GCGCGACC TCAT GGTCGCGC             TTTTGCTGAGTACAG 100 77
 CHQ57_10085 2179232 .. 2179255 + -13.2  -4.77438   AGGGGGGAGATAAAA          CAGGGGCATT TTTC AGTGCCCCTG           TTTTTAGTCATCGGT 100 59
 CHQ57_10095 2181755 .. 2181779 +  -9.2  -3.32963   TTAACCCGGCGCGCG          GCAGGAGCCG TTATC TGGCCCCTGC          TTCTGACATGACCCT  69 264
 CHQ57_10115 2185997 .. 2186012 + -11.8   -3.8709   GATGGGCTGATAAAA              CGGGGC TGCG GCCCCG               TTTCTCCACCAGTTT  90 31
 CHQ57_10120 2187700 .. 2187716 +  -9.4  -5.27023   TAAAAATGCAAAAAA              GACGCC CTTGC GGCGTC              TTTTCTTTTTCCAAT 100 70
 CHQ57_10125 2188382 .. 2188397 + -10.4  -5.27023   CCTGAAAATAAGAAA              GACGCC TTAG GGCGTC               TTTTCTTTTTCCAAT 100 97
 CHQ57_10130 NONE
 CHQ57_10135 2191896 .. 2191909 +  -3.1  -3.73775   CCTACATCAGGACTT               GTAAG AGAT CTTGC                TTTGATGGAAATGAG  53 138
 CHQ57_10160 2197798 .. 2197811 +  -5.9   -5.0925   AAGATGTCAGAAAAG               GGGCC TGGC GGTCC                TTTTTGGTTTTGCAA  86 119
 CHQ57_10165 2198817 .. 2198836 +   -15  -5.06414   GTTATGGTTTTTCCA            GCCGACCC CAAG GGGTCGGC             TTTTTATTGGGCGGG 100 267
        sixA 2202371 .. 2202381 +  -6.8  -2.79183   TTACGGAATTATTTC                 GCAG AAG CTGC                 TGTCATACGGATACA  53 113
 CHQ57_10180 2202650 .. 2202675 + -14.8  -4.17762   TCCCATCCAGCCGCT         TCATGCCCGC CACTGT GCGGGCATGA          TTGTTTTCAGCCCTG 100 52
 CHQ57_10185 2203749 .. 2203767 + -14.6  -5.27335   AGGAAGATTGAAAAA             GACCGCCT TCG AGGCGGTC             TTTTTGTTTAGGCGG 100 30
 CHQ57_10195 2207006 .. 2207020 +  -8.6  -5.37043   GCCTCAAAAAACCGT               CAGTCT TGA AGACTG               TTTTTTATGTCAGGT 100 205
 CHQ57_10205 2208573 .. 2208584 +  -7.2  -3.63922   GATCAGAGGATCTCA                GGGC TCAC GCCC                 TCTTTTACCACGACT  63 184
 CHQ57_10230 2212479 .. 2212493 + -12.8  -3.51232   AAGAAATCTTTCTAA               GGCCGG CTC CCGGCC               TTGCTTTAGGGGCCG  86 26
 CHQ57_10235 2213319 .. 2213341 +  -7.7  -3.87538   CGCCCTTGAAAGCAG           GGCCGAG TACTGACCT CTCGGCC           TTGTTCTGCTCCTTT  72 32
 CHQ57_10270 2219326 .. 2219362 +  -3.6  -3.63515   AAAACCCGCTAATAG   CACCA-CCTTCCCCCGT GCTC GCGGGGGAAGGCTCGCC    TTCTTGCCACTCCAA  53 29
 CHQ57_10275 2219879 .. 2219892 +  -4.5  -3.86346   TGAACAAGACGTAGC               GGGTT TGCT GACCC                TTTATCGGGAGCTGA  60 110
 CHQ57_10280 2220812 .. 2220837 + -13.5  -4.65895   GATCTATCACGCAAA         TAAAAAACCGC CGAG GCGGTTTTTTA          TTTTTCAGTGCGGGC 100 504
 CHQ57_10300 2223895 .. 2223934 +  -7.1  -4.50761   AAGGGATTTTTACGG  GCCGTGGCTGCCTGATGG TGCCC CCATCAG-CTGACAAGGC  TTTATTTCCCTTGCT  77 69
 CHQ57_10305 2225058 .. 2225087 + -22.3  -3.62591   ATGGTTTACCAGCAA       CAACAGAGGGGCC CGCA GGCCCCTCTGTTG        TTTGCAGCTTGTCCA 100 40
 CHQ57_10315 2226561 .. 2226583 +  -4.1  -3.90744   ATGGCCTTTAGGATA          G-CGGCCAAG TCAG CTTGTCCGGC           TTGTTTACACAGCAA  58 133
 CHQ57_10320 2227603 .. 2227626 +  -8.8  -3.29144   GCGTCCCAGCCCAGG          CAGGGGGCGA GCCG TTTCCCCCTG           TTCTCCCACCAGTGC  63 197
 CHQ57_10335 NONE
 CHQ57_10340 2232369 .. 2232394 +  -7.5  -2.68823   CAGAGATTGGGGACA         GGGCTGGGTTT GGGT ATACTCGGCCC          CTTCTCTGGCGCCCG  56 138
 CHQ57_10345 2233194 .. 2233220 +   -18  -4.72272   TGCATGAATAGAAAA         GCCCACCCCGAG TCA CTCAGGGTGGGC         TTTTTGATGGCCGCA 100 54
 CHQ57_10355 NONE
 CHQ57_10360 NONE
 CHQ57_10365 NONE
 CHQ57_10370 NONE
 CHQ57_10375 NONE
 CHQ57_10380 NONE
 CHQ57_10385 NONE
 CHQ57_10390 NONE
 CHQ57_10395 2237016 .. 2237028 +  -3.4  -3.83927   TCTGGCCCCCGCAAC                CAAC TTTCC GTTG                TTTCCCTCTTTCTGT  53 24
 CHQ57_10400 NONE
 CHQ57_10405 2239414 .. 2239448 + -17.3  -3.02511   AGCGGATCGCCAGAC     ACACAAAAGGCAGCC ATCAA GGCTGCCTTTTGTGA     TCTTGAGGGGATCAG 100 55
 CHQ57_10415 2241669 .. 2241680 +  -7.2  -2.51133   TTTGGCGTTTGCAGG                GGCC TATT GGCC                 GTTGATCAGTAACTC  52 132
 CHQ57_10420 2242099 .. 2242113 + -11.4  -4.82901   AGGCGGATTAAAAAA               CCCTCC AGC GGAGGG               TTTTTGTCACAACAA 100 142
 CHQ57_10440 2245829 .. 2245853 +  -4.9  -2.64099   CGCAGAAACCGTCAA          GCTGACAAGCA GTC TGTCTGGCAGC          CTTGTAATAACAACG  45 21
 CHQ57_10445 NONE
 CHQ57_10450 2247986 .. 2248000 +  -3.5  -3.05849   CAGCGTTAAATACAA              GGC-CC TGAT GGAGCC               CTTTGCTTTGATGGA  46 32
 CHQ57_10455 2252502 .. 2252520 +   -16  -4.41047   GGGTAAATAAACGAA             CGGGAGGC TTG GCCTCCCG             TTTTAGTTGCAAAAT 100 75
 CHQ57_10460 NONE
 CHQ57_10465 2253864 .. 2253874 +  -6.8  -3.71848   GCCTGCCAGCTCTAC                 CGGA TCC TCCG                 TTGTTCATCCGACGG  66 162
 CHQ57_10470 2254354 .. 2254374 + -15.5  -3.38768   CCACTCATAAACGTA            TTGGGCCAG CTG CTGGCCCAA            TTCTCCCTCATATGC 100 31
 CHQ57_10475 NONE
 CHQ57_10480 2255632 .. 2255648 +  -2.9  -3.24598   GTCTGCAAGCTAGTT              CATCTCT GAT AGGGACG              TATTGATGGTTTATT  45 28
 CHQ57_10485 2256551 .. 2256569 + -11.7  -4.67942   CCACGAGTGCTTAGA             GAGCGGC CACGA GCCGCTC             TTTTGCTTTCTTGGA 100 55
 CHQ57_10495 2258004 .. 2258019 + -10.4  -4.93365   ACACGCAATGAAACA              TCCGCC AGCT GGCGGA               TTTTTCATTATGGGG 100 44
 CHQ57_10505 2260653 .. 2260674 + -10.1  -5.67063   GCGGAAATAAAAAAA           CCGCCAGAT AACA ATCAGGCGG            TTTTTTTATCATGCC 100 42
 CHQ57_10515 2261505 .. 2261532 + -17.2  -4.60924   TTTCGTTCATACCGC        CAAATGCCAGTC TTCG GACTGGCATTTG         TTTTTCAAGGGTTTC 100 49
 CHQ57_10520 NONE
 CHQ57_10525 NONE
 CHQ57_10550 2271671 .. 2271686 + -11.8  -4.75404   AAAAAGGATGAGCAA              GGGGCC TGCG GGCCCC               TTTTTGCTGGCCTTT 100 44
 CHQ57_10560 2273132 .. 2273160 + -21.7  -2.80994   GCCAGGCCGCATAGA        GAGCGCCCGGCAC TGT GGGCCGGGCGCTC        TCTGGTGAGGTTAGC 100 77
 CHQ57_10570 2276970 .. 2276987 + -10.5  -4.18018   ATTTAAGAAATGCAG             TGGGCCC TGAT GGGCCCG              TTTTGCGTGCCGACC  91 56
 CHQ57_10575 2277867 .. 2277892 +  -9.8  -2.64051   TAAAAAATAGCGCCG         GCTACTGACA CAAGGC TGTCAGTGGC          TCCCTTCTATGCTGG  66 38
 CHQ57_10580 2278330 .. 2278347 + -14.1   -3.9009   TGTCATAAGGAGAAA             CGGGCCC ATCA GGGCCCG              TTTCTCACATCGGTT 100 90
 CHQ57_10640 2293921 .. 2293931 +  -2.4  -3.57144   TGCCCGCTTTTGCAG                 CGGG ACG CCCC                 TTTGACCATCCAGAC  49 81
 CHQ57_10645 2295913 .. 2295939 +  -3.6  -3.60661   CACTGATTTGAACAG         CCAGTGAGTTCG TCC TGGACTTGCCGG         TTATGTAATTGACTG  53 95
        tsaB 2296734 .. 2296754 +  -2.3  -3.05022   CTTGCTGCATACCCA            CAGGGCTGG TAA CGCGCCCGG            TATCTGTATCCCAAA  42 70
 CHQ57_10655 NONE
 CHQ57_10660 2298350 .. 2298361 +  -3.6  -2.82623   GAGGCAACACAGTGA                GCGC ACAG GTGC                 TAGTTATGCAGGAGA  43 191
 CHQ57_10665 2300086 .. 2300103 +  -9.1  -5.79595   CGCTGTCATGCAAAA             CCGTGGG TCAT TCCACGG              TTTTTTCTTTTGGCC 100 53
         rnd 2301271 .. 2301286 + -10.4   -5.4251   ACACCAAAAGAGAGA              TGGGCC GCTG GGCCCA               TTTTTTATATCTGCC 100 44
 CHQ57_10690 2304400 .. 2304424 + -10.7  -5.27938   TAATGCTATGGAGTC          GGCCTGTCATG TTG CGTGATGGGCC          TTTTTATTTCCCGCT 100 63
 CHQ57_10695 2305088 .. 2305109 + -13.7  -3.66178   TTGCGCGTCTTGAAA           CCGGTGCCC GTCC GGGCATCGG            TTTGAAATTCAAGCG 100 75
 CHQ57_10700 2307916 .. 2307932 +  -7.2  -2.71712   GAACAAGCCCACAGC              CCGGCG CTGGA TGCCGG              ATTTCAAGACGAGAG  53 114
 CHQ57_10705 2308427 .. 2308458 + -19.6  -5.28826   CAAGCGTGACCAGGA      CGCAGCTGATACAG GGAT CTGTGTCAGCTGCG       TTTTTTATGGCGTTT 100 168
 CHQ57_10715 2311611 .. 2311628 + -12.7  -2.70932   TAGTGTCTGACTTGC             GCCTCCC GCCC GGGAGGC              TGGTTGGGGGAAGCA  77 75
 CHQ57_10720 2312095 .. 2312115 + -12.6  -5.06816   GGAAGGCGTCATCAG            GAGCAGGC CGGGT GCCTGCTC            TTTTTATTCAGGCAT 100 52
 CHQ57_10725 2316161 .. 2316180 +  -2.9  -2.51547   TCGCCCAGTGCTAAT            CTGC-TGT AGGAG ACAGGCAG            GTCTTCGTGTCGGCG  40 27
 CHQ57_10730 2317156 .. 2317183 +  -9.8  -2.59954   CGCCCTCGTTTTGCG        AGGTGCTGACCG GTCG CAGTCAGCACCA         TAAATTCATCTATAT  66 77
 CHQ57_10735 2317526 .. 2317543 + -11.3  -4.84527   CTGGTTGAAGAAAAA             GCCACTC TCAG GAGTGGC              TTTTTGCTGTCTGGC 100 53
 CHQ57_10755 2321496 .. 2321520 + -16.5  -4.70626   TAAATCCGGTATCAA          GGGGCCACCTT CTT AAGGTGGCTCC          TTTTTCAGGTTATTG 100 68
 CHQ57_10775 2326334 .. 2326354 +   -14  -3.76775   TGCCACGCATAAAAA            CGGGAGCC ATCGG GGCTCCCG            TTTGCCTATGTTGGC 100 58
 CHQ57_10790 2330531 .. 2330549 + -12.4  -5.39721   TTGAGGTGGATTTGA             GGGTGGGC ATG GCTCACCC             TTTTTTATATAATGG 100 56
 CHQ57_10795 2331265 .. 2331281 + -11.5  -5.08824   GTTAAGATGAAACAA              GCCGGGT GAT GCCCGGC              TTTTTTAAATGAACA 100 36
 CHQ57_10800 2331938 .. 2331956 + -17.4  -3.37959   CTGAGTGTTGAAAGA             GGGGCGCC CAT GGCGCCCC             TTGCTGTTGGGCTTG 100 64
 CHQ57_10805 2333827 .. 2333840 +  -9.5   -5.4387   TTGTTGATTGACGAA               GGGCC TGCG GGCCC                TTTTTTCATTTCTCT 100 53
 CHQ57_10815 NONE
 CHQ57_10820 2339769 .. 2339786 +  -8.3  -3.90425   GAATAAATGACGAAA             CGGGAGC CTGG GCCCCCG              TTGTTCGTTTAGCTC  74 59
 CHQ57_10830 NONE
 CHQ57_10835 2341404 .. 2341424 +  -3.3  -4.03234   CTACCGCGGTAAAAA            GGTAATC GCTTAAG GATTGCC            TTTGTCTACGCAAAC  58 13
 CHQ57_10840 NONE
 CHQ57_10845 2343413 .. 2343452 +  -2.9  -4.32571   CTGATCCGCCTCTGA TC-TTCAGCGGGATGGCGC CCAG GCATCATCCCG-TGACCGA  TTTCGTTTTGTCTTA  62 26
        fabD NONE
        fabG 2345205 .. 2345223 +  -5.2   -3.8901   TCAAATTTGCGATAG             TACGCCGA AGT TTGGCGAA             TTTCGTGGTTTGACC  63 62
 CHQ57_10860 2345573 .. 2345604 + -18.2  -3.49176   AATAAGTTCCTGTTC      TGAAAGAAGCGGCC CAAG GGCCGCTTCTTTTA       TGTTTACTCCCTTTC 100 36
        fabF NONE
        pabC 2347778 .. 2347816 + -10.3  -3.05022   TCGGCTTTACACCCT  GCTCGCGGGCGCGGC-ACT GAC AGTTGCCGTGGCCG-GGGC  TATGTATATCACAAG  69 41
 CHQ57_10875 NONE
 CHQ57_10880 NONE
        holB 2350309 .. 2350319 +  -3.2  -3.39327   ATCTGATGAACTGGC                 TCAG CCG CTGG                 TTATAAATCTGACAA  47 9
 CHQ57_10890 2351332 .. 2351357 + -12.1  -3.35197   TTAGCGGTTCTATAA         GTATCGATAAT ATTC ATTATCGATAC          TTGATGTATATGAAG  83 227
 CHQ57_10895 2352535 .. 2352549 +  -3.5  -3.61398   CAAAGTGCCCGATGG               GAGGG GAAAA CCTTC               TTGTTCAGGCAACAA  53 113
 CHQ57_10900 2353001 .. 2353027 +  -7.3  -4.11216   ACTGGTGTTCGGATA         GCCTTAAGCTT AGACA AGGCTCAAGGC         TTTTCAAGATCCGAA  70 137
 CHQ57_10925 NONE
 CHQ57_10930 NONE
 CHQ57_10935 2362186 .. 2362204 + -13.1  -3.94877   CCACCAGAAATAGAC             GCGGGCC GCAGG GGCCCGC             TTCTTATTGGAGCGT 100 54
 CHQ57_10945 2363962 .. 2363977 +  -3.2  -3.57462   CAATTTGATGCAAAT              CGTCGG TGTG CTGATG               TTTGACGGTCAACTC  51 404
 CHQ57_10975 2370988 .. 2371007 + -13.6  -4.62475   GAGCACAAACACCAA            GGGCCTGA ACAA TCAGGCCC             TTTTCGTTTCTGGCT 100 63
 CHQ57_10985 2372605 .. 2372638 +  -6.8  -4.07568   GATTTTTTGTCACAT     CATGATGCCGATAA CCCCAT TTATCGGCATCAGC      TTTTGAACAGAGCAC  70 242
 CHQ57_10990 2374125 .. 2374140 +  -4.8  -3.20432   ATAAACAAAACCGCG              CATAAT GTAT ATTATG               TTAAATTGAGTATCT  49 184
 CHQ57_10995 2376229 .. 2376244 +  -4.6  -2.52543   GATCGGAGTTGTTTA              GCGCAC AAGT GTACGC               TAAATTGGCCCAGCT  44 50
        fabA 2376877 .. 2376903 + -12.3   -4.4767   TAACGCAGAGATAAC         GTAAAGGGGCC TCAAT GGCCCCTTTCC         TTTTGTAATGAGTGA 100 57
        ccoN NONE
        ccoO NONE
 CHQ57_11095 NONE
        ccoP 2402846 .. 2402875 + -18.1  -3.83921   CACGTGATTACTCAG       CAAAAAGCCTCGA CTCT TCGAGGCTTTTTG        TTATCTTGTGTTGGC 100 64
 CHQ57_11105 NONE
 CHQ57_11110 2405975 .. 2405985 +  -4.6  -3.60098   GAAGAGGGATCCCGG                 CCGG TAA CTGG                 TTTACCATGACCACT  55 94
        ccoS NONE
 CHQ57_11120 2406863 .. 2406873 +  -3.2  -4.09243   ATACCCTCTGGATCG                 GGAT AGC GTCC                 TTTTGAAACCCTATC  58 9
 CHQ57_11125 2407737 .. 2407747 +    -4  -2.83403   TCGTTGCCGGATCGG                 TTCA GTC TGAA                 ATTTGATCCGGCACA  43 59
 CHQ57_11130 2408823 .. 2408864 +  -2.3  -4.08945   GGCACCTTGCCCTCC CCCGGGACATGGCTA TAATAACGCGCT TATTTGTGTCCCGGG  TTTTACGAGCATGCT  56 56
 CHQ57_11135 2409815 .. 2409843 + -14.7  -3.92746   AACGAAATCTGCAAC        GAAAAAGGAGCGC CTG GCGCTCCTTTTTA        TCTTTTTGGCGTGAC 100 57
 CHQ57_11150 2412406 .. 2412431 + -11.9  -3.15544   TCGTTTACCTCATGA         CGCAACCGGTT GCGT AACCGGTTGCC          TTGATAAACATAAGA  77 178
 CHQ57_11155 2412879 .. 2412891 +  -6.9  -4.14472   CAACCTCATTCTCTG                CGCCG GCG TGGCG                TTTTAAGCCTCTTCA  70 7
 CHQ57_11160 NONE
 CHQ57_11165 NONE
 CHQ57_11170 2416368 .. 2416387 + -10.7  -4.70117   CAAGTAATGTGACAG            GGGGGAG CTTGGC CTCCCCC             TTTGTTTCTTGAGTT 100 34
 CHQ57_11175 NONE
 CHQ57_11180 2418437 .. 2418457 + -12.5  -4.82901   AGACGCATGCAAAAA            GGGCGACCC ATG GGATCGCCC            TTTTTATCGCAGCCC 100 50
 CHQ57_11255 2437105 .. 2437124 + -13.6  -4.72272   AAACAGCAATAAAAA            GAGCGACC CAAG GGTCGCTC             TTTTTCATGGCGGCA 100 499
 CHQ57_11265 NONE
 CHQ57_11270 2441670 .. 2441691 +    -8  -5.12707   CAAGGATGAGACCAG           GGGAGGTC CGGATT GATCTCCC            TTTTTTGCGGTTTGG  91 138
 CHQ57_11275 2444403 .. 2444427 +   -15  -2.90913   CAAGATCTGACAACC          GGGCGGGAGC GACAA GCTCCCGCTC          TCCTGTTTATCCATT  90 48
 CHQ57_11280 2445646 .. 2445656 +  -2.4  -2.75343   CGAAGTACATGCAGA                 CGAC TTG GGCG                 ATTTCGAGCTGTAAG  39 77
 CHQ57_11285 2446106 .. 2446128 + -16.3  -5.27335   AGCACATACAAAAGA           GCCGCCGGA TTGCC TCCGGCGGC           TTTTTCTTTGGCGCC 100 64
 CHQ57_11295 2447890 .. 2447919 + -16.5  -3.57561   ACCCCCATCAGAAAC       AGACAAGGCGACC CGCA GGTCGCCTTGTCA        TTTACACCCTTGACG 100 77
 CHQ57_11315 2453062 .. 2453095 +   -16  -4.21275   AAGCAGCCCCCCTCA     CGCGCTGGCGGCGA CCGCCA TCTTCGCCAGCGCG      TTTTCCATCCATTGG 100 39
 CHQ57_11320 2454602 .. 2454627 + -16.9  -4.56597   TGATGGATAACGAAA         GCCCTGCCAAC CTCC GTTGGCGGGGC          TTTTTGCCAGCAGGA 100 52
 CHQ57_11325 NONE
 CHQ57_11330 2455985 .. 2456005 + -14.7  -4.65895   CCAGAAATGACAAAA            GCCCTGCCG GAT TGGCAGGGC            TTTTTACATCAACCG 100 73
 CHQ57_11340 2458652 .. 2458675 + -16.8  -3.42378   ACGCAAACCAATAAA          GAAGGCGACC TTGA GGTCGCCTTC           TTGCTCTGTTATTGA 100 58
 CHQ57_11355 2461526 .. 2461540 +  -2.8  -3.54638   CAATGTGTTATTCGT               CATGGA GGT TGCATG               TTTACAAAGGGTTCT  49 167
 CHQ57_11360 2463294 .. 2463315 +  -2.9  -2.82327   CTTCTCATCGATGAA           GATCTGGCT CGTT AGCTGGAAC            CTTTCCATCTGGAAA  39 483
 CHQ57_11390 2468533 .. 2468570 + -17.2  -3.28712   ACGGGATAGCAATGC   AAAAAGACCCCCCTCA TGTCAT TGAGGGGGGTCTTTTG    TTATCCGGGGCAACA 100 96
 CHQ57_11405 NONE
 CHQ57_11410 2474140 .. 2474152 +  -2.6   -3.6581   CAGCAGTGGCAGGAG                GGCG CATGT CGTC                TGTTTTAAGCATGCT  49 5
 CHQ57_11415 NONE
 CHQ57_11420 2475892 .. 2475906 +  -5.6  -3.64703   CTGGCTGGCCTGTCT               GCCCGT CAT ACTGGC               TTTGAGTGGCCCCGC  58 214
 CHQ57_11430 2478794 .. 2478811 +  -3.3  -5.00616   CCATTTAAAAGGAAG             CCCAGCG ATGG CGTTAGG              TTTTTTCAGAAAAAA  74 55
 CHQ57_11435 NONE
 CHQ57_11440 2480174 .. 2480200 +   -16  -3.93216   GTAGAGTCCGTCACA         CGAGCAGACAAT CCG GTTGTCTGCTCG         TTCTTCTCCTTTAAC 100 72
 CHQ57_11445 2481841 .. 2481858 + -12.7   -5.7946   TCTGCAGAACCAAAA             GAGCGCC TACA GGCGCTC              TTTTTTTATTCAACA 100 44
 CHQ57_11450 2483375 .. 2483387 +  -4.1  -3.59979   ATTCAAGCACTATGC                CAGTT ATT GACTG                TTTCCGGTCCCGCAG  53 68
 CHQ57_11455 2484977 .. 2484992 +    -6  -3.16564   TAGCAAGGCATTGAT              GGCGCC GATG GGCGCA               TTGGTAAACTCGGCA  50 316
 CHQ57_11465 2486401 .. 2486416 + -11.8  -4.06904   GACACCATAAAGAAA              GGGGCC GGCA GGCCCC               TTTGTCATTGACTCG  91 31
 CHQ57_11475 2488274 .. 2488296 + -11.2  -3.86252   CTGAACAGTGCCAAA           GGAGCGGGCC CGG GTCTCGCTCC           TTCTCTTTGATGCCA  86 63
 CHQ57_11480 2489865 .. 2489883 + -14.6  -5.40072   CACTTTTTCCCGCAA             TACCCGGC CTG GCCGGGTA             TTTTTTTGCAAAACG 100 58
 CHQ57_11485 2491509 .. 2491536 + -18.6   -3.1489   TGTTTGCCAAAAACA        CAAAAAGGCGGG AATT CCCGCCTTTTTG         TTGCCTGCTATTTGG 100 45
        minC NONE
        minD NONE
 CHQ57_11510 2494861 .. 2494883 + -15.6   -5.4505   TTCCCCCAATGAAGA           CCGGATCCTG TAC CAGGGTCCGG           TTTTTTATTGCCGCA 100 64
 CHQ57_11515 2495348 .. 2495358 +  -2.4  -2.64616   GTTGCCCCAATAATT                 CCGG ATC CCGA                 TGATCTGCGTCCCCG  38 28
 CHQ57_11520 2496210 .. 2496235 +  -4.6  -2.66316   AGGCAATGTCTCTGC         CGGCGGGC CCAGATGACC GCCCACCG          TGCTCTGGTGCAGCG  45 135
 CHQ57_11525 2496788 .. 2496802 + -12.8  -4.52142   AACAGGCATAAAAAA               GGCGCC CTC GGCGCC               TTTCTCTTTTCTGGT 100 30
 CHQ57_11540 2499496 .. 2499511 +  -4.6   -4.0942   GGTTGCGGCGTATGA              CGTGCG CAAC CGCACA               TTTCTCTGGTGCATG  62 76
 CHQ57_11545 NONE
 CHQ57_11550 NONE
 CHQ57_11555 2500658 .. 2500681 + -16.8  -4.93877   CCTGCATAGAAACAA          CAACGCAGCC CTTG GGCTGCGTTG           TTTTGTTTGGTACGG 100 69
 CHQ57_11565 2502417 .. 2502437 + -13.3  -5.48825   ATCAATCTGTTTCCT            GAGGTACGC CAT GCGTGCCTC            TTTTTTTGCCTGCTA 100 24
 CHQ57_11570 2503717 .. 2503734 + -11.3  -4.35524   CGTGATCAGGCGCAA             GGGGCAT GGCA ATGCCCC              TTTTGCATTTGCCCG  95 58
 CHQ57_11575 NONE
 CHQ57_11580 2504834 .. 2504852 +   -16  -4.23054   TTCGAGCAATCAAAA             GGGCCTGC AAT GCAGGCCC             TTTTCCATGGTATGT 100 57
 CHQ57_11590 2505857 .. 2505883 +  -5.6  -3.57462   CCGGGCAGAAAGCCT         GCCGCCAACCGT TTC GCGGCGGGCGAC         TTTCAGGCTAGAATG  58 42
 CHQ57_11595 2507322 .. 2507350 +  -5.9  -2.65815   CTCAAAGTGATCTAT        GGCCGTTTCGG CGCCCAT CCGTAACGGAC        TGATCTGGCTGTGGG  50 2
 CHQ57_11600 2508496 .. 2508507 +  -5.8  -2.78992   GCTGGTGTCATGAAG                CGGT CATT ACCG                 ATTCTTGCAGTGGGT  51 143
 CHQ57_11605 NONE
 CHQ57_11610 NONE
 CHQ57_11615 2508831 .. 2508852 +  -5.1  -3.33815   GTTGGAACACTATAT           TGACATGGC ACAG GCGATGTCG            TTGGTTCGAACCAGT  54 76
 CHQ57_11620 2508985 .. 2508995 +  -6.8  -2.75382   AAAGAAGTCGCATTG                 CGCA CCC TGCG                 TCCTTAGCTCAGCTG  53 52
 CHQ57_11625 2509080 .. 2509098 +   -16  -4.70659   CACCAGATTAAAAAA             GCCCGCTC CAT GAGCGGGC             TTTTTGCATGTCAGG 100 36
 CHQ57_11635 2512363 .. 2512381 +  -3.1  -4.07568   GGCTGAGTGAGACGG             GCAGC GGATCAGGG GCTGC             TTTTCCCCACACACG  58 31
 CHQ57_11640 NONE
 CHQ57_11645 2514348 .. 2514371 + -12.4  -3.37796   GGTAGCCATAAACAA          CATGAGCGCC CGAA GGCGCCCATG           TTGTGACTGATGACG  83 67
 CHQ57_11670 2519919 .. 2519942 + -18.2  -4.05747   TCCCAGACAAAAAAA          GAGAGGGCGC CCAG GCGCCCTCTC           TTTCTCTCCGATATC 100 87
 CHQ57_11690 2523849 .. 2523870 + -17.3  -4.34402   AACGGCCATGCAAAA           GGCCCTGCC GTGA GGCAGGGCC            TTTTCGTATGACAAG 100 64
 CHQ57_11700 2526371 .. 2526409 +  -4.5  -3.01924   CGAGCTGAAGTCAGA  GCCGTACTAGTCCTGCGCC TGC GGCACTG-AC-AGCACGGC  TGTTGACGGCCCCTC  48 16
 CHQ57_11705 NONE
 CHQ57_11710 NONE
 CHQ57_11715 2530218 .. 2530234 +  -2.1  -3.34715   CTCAATCACCTGTTC              TCCCGGG GAG CCCGCCA              TGTTTAAACGCAATC  45 2
 CHQ57_11720 2531327 .. 2531339 + -10.5  -3.03159   TTTGGCGTGATAGAG                GGCGG CAT CCGCC                TGTTGCACCAGTTCA  64 105
 CHQ57_11750 2536075 .. 2536088 +  -3.1   -5.2189   GCATAAGGTTGCCTG               GCACCT GAG AGG-GC               TTTTTTAGTCCTTCA  82 57
 CHQ57_11765 2538681 .. 2538694 +  -2.4   -3.6106   TGCTCATAACACCTC               CTGA ATGACC TCAG                TTTGAGGCTCTTAAG  49 295
 CHQ57_11790 NONE
 CHQ57_11795 2541143 .. 2541161 +  -5.3  -4.15565   TCGGTGGTATAGGTG            CCGTCTAC TTGA GT-GACGG             TTTTGACATAGTGAC  68 114
 CHQ57_11840 2556684 .. 2556703 +   -15  -3.06528   ATCGTGTAACCCAAT            GAGGGGCC TGTA GGCCCCTC             TGCTGTTTTTGATTT  93 32
 CHQ57_11895 2569316 .. 2569326 +  -8.2  -3.88787   ACCAGCTGCTTGACC                 CGGG ATC CCCG                 TTTCTCGAACTCTCG  74 218
 CHQ57_11905 NONE
 CHQ57_11910 NONE
 CHQ57_11915 NONE
 CHQ57_11920 NONE
 CHQ57_11925 NONE
 CHQ57_11930 2578799 .. 2578827 + -12.3  -4.14243   TGGATAACTGACCAC        TGCCGGAGAGCAG AAA CGGCTCCCCGGCG        TTTTCACCTCAGCTC  95 30
 CHQ57_11935 2580087 .. 2580102 + -10.4  -4.87626   TCAGATTGTGAAAAA              GGCACC TTCG GGTGCC               TTTTTGCTATTCAGA 100 53
 CHQ57_11950 2583236 .. 2583253 + -11.3  -5.16132   CGACACAACGAAAAA             TGGCAGC CTCG GCTGCCA              TTTTCTTTTGCTGTA 100 47
 CHQ57_11990 2592102 .. 2592119 + -11.3   -5.7946   CTTGAATAGAAAAAA             CCGGCAA GTGA TTGCCGG              TTTTTTTATTACCGC 100 60
 CHQ57_12030 2601778 .. 2601797 + -13.6  -4.86621   TGAGACGTCAAAAAA            GGGCAGAC TAGG GTCTGCCC             TTTTTCATTGCCACT 100 67
 CHQ57_12035 2602439 .. 2602474 + -24.8  -3.58726   AAACCACCTGAAAAC    AGAAGGGCCCGCCGGT TTGC ACCGGCGGGCCCTTCG     TTATGTATCGGCAGC 100 47
 CHQ57_12055 NONE
 CHQ57_12060 2609930 .. 2609961 + -13.9  -5.17507   GGAAGCCATATCGGC      TAATGCCAGTCAG TTAAGC CTGACTGGCATTG       TTTTTATTGGCTTTT 100 71
 CHQ57_12100 2619132 .. 2619154 +   -15  -2.88069   CATGGTTTGACGACT           TTCCCCTGTT TCA AACAGGGGAA           TAATTGTAATCTCGG  90 108
 CHQ57_12105 2620620 .. 2620638 +   -16   -4.8048   CCCTTGAAACAAAAA             GCCCTCGC ATT GCGAGGGC             TTTTTCATATCAAGA 100 52
 CHQ57_12130 2624619 .. 2624636 +  -8.4  -4.84527   GGAGCGATAGAAAAA             GGCGAC ACAAAG GTCGCC              TTTTTACTCTGTCAC  93 199
        pabB NONE
 CHQ57_12145 2628629 .. 2628640 +  -2.2  -2.84795   GTGAGGGTTTATCCC                TCGC AAAG GTGA                 ATTTGATCAACATTT  41 152
 CHQ57_12150 2630044 .. 2630065 + -15.9  -5.24129   TAACGGTAAAGCAAA           TGCCCGCCA GTGA TGGCGGGCA            TTTTTTATGCACAAA 100 52
 CHQ57_12160 NONE
 CHQ57_12175 NONE
 CHQ57_12180 2640915 .. 2640930 + -11.8  -4.80455   TCAACCATAAAGAAA              CGCGCC AAAA GGCGCG               TTTTCTCTTTGCATC 100 49
        nhaB 2643583 .. 2643607 +  -9.9  -5.14477   GCACTGCACTAAAGA          CCAAGGGCCCC TGC GGGGCCCTTTC          TTTTTTGGCTATGTC 100 29
 CHQ57_12195 2644702 .. 2644720 + -14.6  -4.85599   TTCACACAATAAAAA             TGGGAGCC AGT GGCTCCCA             TTTTTATGACCTGCC 100 225
 CHQ57_12215 2648509 .. 2648520 +  -2.2  -3.06831   TATCCCGCGAACAGT                GGGT CAGC ATCC                 TTACCTGCCCCTTGA  42 462
 CHQ57_12225 2650555 .. 2650581 + -15.2  -2.65547   GGATTTGCTGCAATA         GAAGGGGAGCCG TTA TGGCTCTCCTTC         TACCTTTCACGGTTT  95 50
 CHQ57_12230 2652361 .. 2652397 + -11.5  -5.08824   GCCGCAGCCAGCCCG    AACCGGGCTCCCCTTTT TTC AAGCGGGGAGCCCTGTG    TTTTTTACCTCCAGC 100 51
 CHQ57_12235 NONE
 CHQ57_12240 NONE
 CHQ57_12245 2655629 .. 2655646 + -12.7   -4.7373   ACCCGCAATGAAAAA             GAGCGCC AAAG GGCGCTC              TTTTTCATGACATCA 100 50
 CHQ57_12270 2661539 .. 2661553 + -12.8   -5.5454   ACCATCCAGCTTTTG               GGGCGC TCG GCGCCC               TTTTTCTTTGTTTGC 100 48
 CHQ57_12275 NONE
 CHQ57_12280 2664681 .. 2664695 +  -5.6  -2.85896   GCCGCCGGCCATATT               CTGGGC GCG GCCCAA               TGATTACTTCGTCCC  49 8
        glpC 2666180 .. 2666198 +   -16  -3.90112   AGACAGACACGCAAC             GAGCCGGC CAT GCCGGCTC             TTTCATTGCAGCAGA 100 253
        nrfA 2668167 .. 2668218 +  -4.9  -3.28684   CGGACGGCTGGCACA GT-AACGGCGCCTGCGGGCCCGGC CCCAA GTCGGGCCCGCAGCTGATGGAGGC TTCCTATGGGTGATT  51 22
 CHQ57_12295 2668811 .. 2668837 +  -2.9  -3.86015   GAGCGTGAGCAAGGA         GGCACCATGAG CTGCT CTCGTCGTGAC         TTTATGGCGGGCATG  55 16
 CHQ57_12300 NONE
        nrfD 2670508 .. 2670540 + -23.5  -4.26202   ATAAGAAACAGGTCA      CAAGCGCCAGCCGCC TTG GGCGACTGGCGCTTG      TTTGTTGCTGGATGT 100 37
 CHQ57_12310 NONE
 CHQ57_12315 NONE
        nrfF 2674479 .. 2674502 +   -11  -3.30243   ATGATCCCCATTCGC          TGTCACGCCG TCTC CGGTGTGGCA           TTATCGGAAATCGAT  76 164
 CHQ57_12330 2676295 .. 2676319 + -22.9  -3.93782   CCCAAAATGTAAAAA          GCCCCCGCACC ACT GGTGCGGGGGC          TTTGCTGTTGCGTGG 100 52
 CHQ57_12340 NONE
 CHQ57_12345 NONE
 CHQ57_12350 2681312 .. 2681335 + -12.5  -3.84451   GCCAGACACACAAAA          GAGGGAGTG CATGGT CACTCCCTC           TTTGCATTTAGCCAC  91 64
 CHQ57_12360 2684206 .. 2684223 + -11.3  -5.10461   AACGCCAGAGAGCAG             GAGCAGC CCAG GCTGCTC              TTTTTATTGCGTCAG 100 87
 CHQ57_12365 2685566 .. 2685582 + -10.8  -2.83905   AGGAACAATGACTCG              GCGGGG TATCC CCCCGC              TATGATGCCTTATCG  71 65
 CHQ57_12380 2689973 .. 2690016 +  -3.9  -3.21416   GCGTAAAAAAGCCGC CCCTG-GGGCGGCTTGC GATGAGTCGGGA GCCAG-CGCCCTCAGGG TTCGTCCTGGCAGTG  47 35
 CHQ57_12400 2695262 .. 2695293 + -18.8  -3.57144   GGGATCAAGGCGAAT      GACAGAGGGCAGCC AACC GGCTGCCCTCTGTG       TTTGCAAGTCGGGAC 100 45
 CHQ57_12410 2697035 .. 2697064 + -20.9  -4.01888   GCTCAAAGCACACAA       CAAGAAGGGAGGC ATCA GCCTCCCTTCTTG        TTTCTCGTCTCCGAT 100 87
 CHQ57_12415 NONE
 CHQ57_12420 2699794 .. 2699826 + -25.7    -4.431   AATCTGACGTACAAA      GAGCCCGCCCCATCG CTG TGATGGGGCGGGCTC      TTTTATGGCTGCCTG 100 73
 CHQ57_12435 2706538 .. 2706560 + -14.9  -3.32698   ATGTGATAGTCTGTT           GAAGGGGCC TTGAT GGCCCCTTC           TGTTATATGGCGTCC 100 40
        focA NONE
        pflB 2710118 .. 2710135 + -14.1  -5.76633   CGCAGTGACTAAAAA             CCGGCGC CCAG GCGCCGG              TTTTTTTATGTCTGC 100 63
 CHQ57_12460 2713136 .. 2713154 +   -16  -5.07486   TTCAAACCATAAAAA             TGCCGCCC ATT GGGCGGCA             TTTTTATTAGAGATA 100 65
 CHQ57_12505 2724576 .. 2724592 + -13.7  -5.27938   ATGGTTTGTTACCAA              GGCGGTC ATT GACCGCC              TTTTTATTTGCCGCT 100 55
 CHQ57_12510 2724968 .. 2724981 +  -3.8  -2.91873   AGCCCGCTAAAGGCT               TGCC ATCAAA GGCA                TCGTTTGGAAATGAT  45 31
 CHQ57_12515 2725602 .. 2725617 + -11.8  -5.06451   GCAGCCAATAAAAAA              GGCGCC TTTC GGCGCC               TTTTTTCACATCATC 100 51
 CHQ57_12525 2728992 .. 2729023 + -17.4  -2.61727   CGGCTTGAATACAAT      AAAAACGGGCTCCC CGAT GGGAGCCCGTTTTA       TCGCTTGTCATGCAT 100 58
 CHQ57_12535 2731397 .. 2731425 + -19.7  -3.02043   GTCCTTCTCTTCCCT        TACTAGCCCGGCG TCC TGCCGGGCTAGTA        TCTTCCCCCGAGGTT 100 86
 CHQ57_12540 2733195 .. 2733222 + -14.2  -4.17523   CCTGTGTCAGATAAA        GTGCCGCTTTCT TGCC GGGAAGCGGCAC         TTTTGCAAATTATTT 100 78
 CHQ57_12545 2734992 .. 2735019 +   -20  -4.86731   CTCCATCGCCGAGAA        GGACCGTCACTG CATG CAGTGACGGTCC         TTTTGTTTGGGCGCA 100 46
 CHQ57_12550 2735674 .. 2735690 +  -2.1  -3.13432   TCATTTCGCCGCCCC              CCGTTGC CGC GCACCCG              TTCCGTCATGTTCAA  43 72
 CHQ57_12555 2736545 .. 2736561 + -13.7  -4.10552   GCCAGATACAGAAAA              CGCAGCC CAG GGCTGCG              TTTCATTTGATCCGA 100 87
 CHQ57_12565 NONE
 CHQ57_12570 2737598 .. 2737626 + -21.1  -3.15236   TCGAAGGGCAATAAA        GAAGACGCCGGCT TGA GGCCGGCGTCTTC        TTCACTATGGGTTTA 100 70
 CHQ57_12610 2748181 .. 2748201 + -13.9   -5.4833   ATCCATGCCAGATTT            GCCCCCGCC AAT GCCGGGGGC            TTTTTTCTTCCCTGA 100 69
 CHQ57_12620 NONE
 CHQ57_12625 2751092 .. 2751131 + -17.2  -2.73364   TACGTTTGCCCAGCA  CCTGACTGGATGTGCCAT GGCC ATGGCGCATCCAGGCCGG   TGATTGCCCTACAAC 100 70
 CHQ57_12630 2752262 .. 2752274 +  -3.4  -2.79112   TTGGCATCCCCCTGC                GCTT CAAAC AAGC                CTTACTCTTTTTTCG  41 74
        galE NONE
        galT NONE
 CHQ57_12660 2760009 .. 2760031 + -17.8  -3.53811   AAGTCAATCGGCAAA           CAGGGACGTC AGT GACGTCCCTG           TTTGCGGCCAATACC 100 210
 CHQ57_12685 NONE
        araD NONE
 CHQ57_12695 2769074 .. 2769101 + -15.6  -5.14563   GCGGCCACCACCATG        ACAACAGCCCCG CCAG CGGGGCTGTTGC         TTTTTTGATGGGGCA 100 56
 CHQ57_12705 NONE
 CHQ57_12710 NONE
 CHQ57_12715 2773003 .. 2773028 + -11.9  -4.57073   TCAGGCCATACCTTG         CATGCCAGTCG ATAC CGACTGGCATC          TTTTTACCCGGGATC 100 60
 CHQ57_12720 NONE
 CHQ57_12725 2775835 .. 2775849 +  -2.8  -3.21872   AATTTCAACTATTTG               TGCACT AAC ATTGCA               TTGACTGTGTTTGGC  45 121
 CHQ57_12730 2776437 .. 2776461 + -18.7  -4.06419   AGGATTTACCAACCA          TTCAGGCTCCC GAT GGGAGCCTGAA          TTGTTTATGGCAGCA 100 64
 CHQ57_12740 NONE
 CHQ57_12745 2779420 .. 2779441 +  -8.7  -3.73775   TTTGCTCTTTATCAC           TGGTTGACC TGAG GGTCACCCA            TTTACTGGCGCTGCG  72 14
 CHQ57_12750 2780514 .. 2780552 + -24.8  -3.15699   TGAGGTACATGACGC   CCAACAACAAGGGGAGCC ATT GGCTCCCCTTGTTGTTGC   TGTTGATCGCTGAGT 100 38
        pspF NONE
 CHQ57_12830 NONE
 CHQ57_12835 NONE
 CHQ57_12840 2798472 .. 2798488 +  -2.2  -3.15544   GAAGCACTCAAAGAG              GGGAAT GATTA ATGCCC              TTGCTCGACATACGC  43 14
 CHQ57_12845 NONE
 CHQ57_12850 2800528 .. 2800539 +  -5.8  -3.54424   CGGCGAGCAGACAAG                CTCG GCTT CGAG                 TTTGCCAAAATAAGC  55 252
 CHQ57_12895 2811279 .. 2811290 +  -5.8  -3.07043   TTGGCGCTCTGCTGA                GCGT CATC ACGC                 TGTTGAAGTGGTCAA  53 283
        trxB 2812704 .. 2812723 + -13.6  -4.74103   GCAAGGGATATAAAA            GGCATGCC GTGA GGCATGCC             TTTTTACGTTAAGGA 100 43
 CHQ57_12905 2814017 .. 2814049 + -10.5   -3.2819   TTCCGTGTAGTACCG      CCCGACAGGCTCC TGTCAAT GGAGACCGTCGGG      TTGCTCCTCTTCCCT  76 51
 CHQ57_12915 NONE
 CHQ57_12920 NONE
 CHQ57_12925 2816312 .. 2816331 +  -9.2  -5.33866   GAATTCAGCAAAAAA            CCCCAACC TCTC GGCTGGGG             TTTTTTGTCGCTTTC 100 46
        cspD 2819462 .. 2819486 + -12.2  -5.55769   TGGATAAATAAAAAA         CCCGGCGAACC GCAA GGTT-GCCGGG          TTTTTTATTGTGAGC 100 50
 CHQ57_12950 NONE
 CHQ57_12955 2820804 .. 2820814 +    -4  -3.21593   TCCTGCAGGGCGCAC                 CATT AAA AATG                 TGTTCTAAAACAGTG  47 24
 CHQ57_12960 2821088 .. 2821102 +  -8.5  -5.80951   GGCACACTTCCCAAA               CCGGC TTTGT GCCGG               TTTTTTGTTTTGGCT 100 109
 CHQ57_12970 2823181 .. 2823201 + -11.1  -2.57132   CGGCTGTTTCCCGAT            GCCCTGGCA TCC TGCCATGGC            CTTATCGCCCACAAA  69 87
 CHQ57_12975 2824576 .. 2824601 +  -7.5  -4.55826   TCTGTACACCCTGTA         TGGTAGCCCAT GCGT AAGGGCTTCCA          TTTTCATATTTTGAA  82 82
 CHQ57_13000 2829714 .. 2829730 +  -9.5  -2.74701   TCCCGACACTTCGCC              CCTCTTA ACT TAAGAGG              TAGTCTTGGAACTAT  63 225
 CHQ57_13005 2831010 .. 2831024 +  -2.7  -4.19238   TATGGGGTCAAATCC               AGCGC ATCAA GCGCG               TTTTGAGCTTCAGCA  60 63
 CHQ57_13015 2833019 .. 2833036 +  -5.5  -3.93984   TCGCCGAGGTAATAT             TGTGCAC CGCT GTGCCCA              TTTATAGCTGCCTTT  62 354
 CHQ57_13030 2836891 .. 2836915 +  -7.8  -2.67515   GTATCGGGCGGGAGA          GCTGGGTTGC TAGAT GCAATCCCGC          TGATATGGTCATCAC  52 522
 CHQ57_13105 2851122 .. 2851144 + -12.7  -2.58699   TAACGTTGGAAATTA          GCCG-CCCGC TTTA GCGGGTCGGC           TGGATTGACTTGTTA  76 325
 CHQ57_13145 2858841 .. 2858852 +  -2.2  -2.67366   ATGAGCATGTGTGAT                TGGC CACC GTCA                 GATTTGTTTCTTTAT  38 93
 CHQ57_13150 2859531 .. 2859546 +  -2.4  -4.75174   TATCAATCTGGCAAA              GCGCTC CGTA GGGCTC               TTTTTAAATTGAGTA  68 217
 CHQ57_13155 2860500 .. 2860512 +  -3.3  -4.57569   CGATTTCCTCTGCTT                TGTCC GAC GGGCG                TTTTTAACCAAATAA  65 117
 CHQ57_13225 NONE
 CHQ57_13230 2875173 .. 2875192 + -13.6  -4.84527   GAGCCAAATTTCAAA            GCCCAGTC TCAG GACTGGGC             TTTTTCATGTCTGCC 100 35
 CHQ57_13235 2875849 .. 2875873 + -12.1  -3.29558   TCGAGTAATAACCGA          GGTGCCCGG CCCGCAA CCGGGCGCC          TGTTCTGCATTCTGA  83 33
 CHQ57_13240 NONE
 CHQ57_13245 2877468 .. 2877486 +    -3  -2.75992   AGGGCGATCCCCACC             GGCCATAG ACC CTACGGCA             TCATCTTCGATCCCA  41 363
 CHQ57_13255 2880994 .. 2881021 + -14.8  -2.98942   GGTGACAATACCATT        CGGGGACCGCGC CTTG GCGCGGTTCCCA         TATCTATCAAGCAGT  93 56
 CHQ57_13260 NONE
 CHQ57_13265 2883076 .. 2883091 +  -2.4  -3.75665   GAAAAAGCGCTGATG              GCCGTG CTGG CGCCGC               TTTGATGGCCTCTCA  51 5
 CHQ57_13270 2884478 .. 2884488 +  -6.8  -3.54935   TACCCTTAGTTGGCA                 GTGC AAC GCAC                 TTTGGCGACCATTTG  61 32
 CHQ57_13275 NONE
 CHQ57_13280 2887573 .. 2887593 + -12.6  -5.08824   TCTGATCCTGAAAAA            GCCCTGTC TCCAT GACAGGGC            TTTTTTGCATCAGGG 100 56
 CHQ57_13295 NONE
 CHQ57_13300 NONE
 CHQ57_13305 2894549 .. 2894561 +  -3.3  -3.77553   TTCCATCTCCACCGT                CAGGG AGC CGCTG                TTGTTGGTGCTCTTG  54 515
 CHQ57_13315 2896410 .. 2896420 +  -6.8  -2.65081   GATTTCATTCAAAAC                 CCAC GGG GTGG                 CTATGTTTTCACTCA  52 220
 CHQ57_13320 NONE
 CHQ57_13325 2900070 .. 2900105 + -10.6  -4.60487   GATTTAACCAATAAA    TAAAATCCCGACAAAA CCTG TTCTGCCGGGATTTTA     TTTTTCCACCTGCTC 100 354
 CHQ57_13335 NONE
 CHQ57_13340 NONE
 CHQ57_13345 2902694 .. 2902713 + -11.4  -4.34402   ACATCAGGCGTAAAA            GAGGCTGC AAAT GCGGCCTC             TTTTGGTATCAAAGC  95 319
 CHQ57_13355 2905314 .. 2905343 +  -3.6  -4.12188   CGGGTGGAGTGCTTC       TGGCCGGGAT-AG CTTCT CTCATTCCTGCCA       TTTTCAGCCTCCTCC  60 352
 CHQ57_13360 2906791 .. 2906813 + -15.6  -4.45544   TGACACCGCATAAAA           GAGGGGCACT CAG GGTGCCCCTC           TTTTCGTTGATGCCC 100 54
 CHQ57_13370 2910491 .. 2910510 +   -15  -3.68529   CCTGAGAAAGTGAAA            GAGGCCGC TGTT GCGGCCTC             TTTGCATACTGCGAT 100 48
 CHQ57_13415 2921246 .. 2921272 + -11.6  -5.72616   GCCCGATGCACAAAA         TCCGAAACCAGC CCG GTTGGTTCCGGA         TTTTTTTATCTGCAT 100 115
 CHQ57_13430 2928685 .. 2928700 + -11.8  -5.94214   AACACACAGCATAAA              CCCGGC ATTT GCCGGG               TTTTTTTATTCTCTT 100 350
 CHQ57_13540 2950196 .. 2950212 +  -6.5  -2.70932   CCAGAAACTCGAAAT              CGCCATC TTC GATGGCC              TCCTTGAACACCCGC  51 367
 CHQ57_13550 NONE
 CHQ57_13555 2952751 .. 2952767 +  -9.4  -5.08824   CGCAGACAGCAAAAA              GGCCTC ATCAA GAGGCC              TTTTTTACATCGCAG  95 301
 CHQ57_13595 2960723 .. 2960753 + -11.1  -5.71712   ATTCCTTGTTTGATG       ACCCGGCCTTGTC ATAGC GACAACGCCGGGA       TTTTTTTATCTGCAC 100 299
        ahpC 2961686 .. 2961709 + -15.3  -3.01918   GCCTCCCACTTCCAA          GACCGGCCC ATTCAA GGGCCGGTC           TGCTTTCTGGCCTCC  95 41
 CHQ57_13605 2963454 .. 2963488 + -15.8  -4.29472   AGCTGGCGGATGACA     TGGTCTGAGTTCGGTA CTG TACCGGGCTCAGGCCG     TTTAGTTTTACTTTG 100 105
 CHQ57_13625 NONE
 CHQ57_13630 2967153 .. 2967173 +   -14  -3.96298   CACAACCCTAACCAG            CACCCCGC CCTGT GCGGGGTG            TTTCGTTACTGCCTG 100 30
 CHQ57_13640 NONE
 CHQ57_13645 NONE
 CHQ57_13650 NONE
 CHQ57_13660 NONE
 CHQ57_13665 2973648 .. 2973672 + -14.3  -3.48288   CTGCCAGAATGAAAA          GAGGGGAGCAT TCT ATGCCCCCCTC          TTCTGGTATGAATTC  95 29
 CHQ57_13785 NONE
 CHQ57_13790 2997986 .. 2997997 +  -7.2  -3.38326   CCTTGTCCTGACAAG                GGGG CTAT CCCC                 TTGCTTCCCCTTATC  59 66
 CHQ57_13795 2999642 .. 2999664 + -16.3  -4.72272   AGCAGGAACGAAAAA           GCCCGCCAG AGATC CTGGCGGGC           TTTTTACTGAGCGAG 100 50
 CHQ57_13815 3005759 .. 3005775 +  -2.2  -3.72893   CTGGCCAGCATGGCC              CACTGG CATGA CCACTG              TTTCATAGAAAAGTC  51 54
 CHQ57_13820 3006583 .. 3006599 + -13.7  -4.74132   CGTATCGTGCAAAAA              GGGGAGC CTG GCTCCCC              TTTTTCATACCCTAT 100 44
 CHQ57_13825 3007561 .. 3007591 + -15.5  -4.02093   CCAGGGTTCATAAAA       AGAAGAGGCGACC CCTTA GGTCGCCTCTTCC       TTATTATCTTGTCTC 100 28
 CHQ57_13835 NONE
 CHQ57_13840 3011762 .. 3011802 + -17.5  -3.53091   CGCTCGGCCTGTAAG  CAGCGGGGGCCCGGTTTCA CGC TGAGCCCGGGCCCCGGCTC  TTTCGAGCGACAGAT 100 27
 CHQ57_13845 3012536 .. 3012580 +  -2.8  -2.53747   GGGGTGAGCTGACTT G-CGGTAACGGGATG-TTACAC TCT GTGTACTCATCCCGGATCCGGC CTCTTATGCGCATTC  40 56
 CHQ57_13850 3013447 .. 3013471 +  -2.8  -4.23988   CCCTGACAGCGAGTC         GTTCGGG--GGC ATC GCCTTCCCGATC         TGTTTTTTCGTATCA  60 152
 CHQ57_13855 3013966 .. 3014014 + -17.5  -2.79183   AGCTGCCAACACGGG CAGGGGCAGGCGCCGAC-CCGA CCGCCT TCGGCGGCGGCGCTTGCTCTTG TCTGCTCCCGGTCAC 100 43
 CHQ57_13860 3014776 .. 3014800 +  -4.9  -2.89191   ACCGCATGCTGGACA          GCTGGTGATCT CCC GGTTTGCCAGC          TATGTCGCCATCTCG  47 18
 CHQ57_13865 NONE
 CHQ57_13870 3017857 .. 3017867 +  -4.6  -3.76482   ATCCGTTCGCAGCGT                 GCCT GCT GGGC                 TTGTTCATCCTCTCC  57 220
 CHQ57_13880 NONE
 CHQ57_13885 NONE
 CHQ57_13890 3021903 .. 3021927 + -14.3  -4.56597   AGCCGTAGAAAGCAG          AAGAGGGAGCC CGT GGCTCCCTCTG          TTTTTCCAGCACGGA 100 48
 CHQ57_13895 3023027 .. 3023049 + -14.9  -3.08211   GAACAAAGCAAAAAA           GAGAGCGCC ACCAG GGCGCTCTC           TCATTTTGCAAGGAT  93 53
 CHQ57_13945 3034716 .. 3034739 + -15.4  -5.47821   ATTTTCCCCGAGAAA          TAGCCCAGTC AAAC GACTGGGCTA           TTTTTTTACCTCCAT 100 40
 CHQ57_13950 NONE
 CHQ57_13955 3038844 .. 3038862 + -13.1  -5.00388   TCGCACAGACAAAAA             CCCCGGC CTGGT GCCGGGG             TTTCTTTTTGGTTTC 100 50
 CHQ57_13975 NONE
 CHQ57_13980 3043424 .. 3043453 + -15.1  -3.93695   GCAGCATGCAAAATG       TAACAAGGGAGGC TTAG GCCTCCCTTGTCA        TTTCTAGCTACTCGC 100 50
 CHQ57_14010 3050376 .. 3050393 +  -6.3  -2.73875   CTTTCACCGACTGAG             CGGATTG TCAT CAATCTG              TCATATTCACACGCC  51 27
        ppk1 NONE
         ppx 3054026 .. 3054059 + -16.9  -3.36131   ACCCCGTAAACAGAC     AAGCAAAAAGGCAGC CCAG GCTGCCTTTTTGCTG      TTATCCACTCGTTTT 100 53
 CHQ57_14095 NONE
        flgM NONE
 CHQ57_14105 3070493 .. 3070503 +  -6.8   -3.3452   AGCGCCGTCCATCCA                 CCAG CAA CTGG                 TTATAAGGTGCTGTC  56 329
 CHQ57_14120 3073597 .. 3073633 +  -5.8  -3.83998   TGAGCAAGGCGCGCC    TTGCCCAGTGTCAGGC GAGCG GCTTAGAACTGGGCGA    TTTCCTCTGCCGTCA  63 38
 CHQ57_14130 3076121 .. 3076132 +  -5.8  -2.84459   ACTTGACGCCAGCCA                CCCT GTCA AGGG                 TATGCTCGTCCTCTT  52 464
 CHQ57_14140 3077102 .. 3077120 +  -8.1  -3.92542   TCAAGCCACAGACGG             CGCCTTG ATGAC CAGGGCG             TTATTTGCCCATCGC  72 18
 CHQ57_14145 3079128 .. 3079153 +  -9.7  -5.63517   ACATATCAAACAAAA         GACCCCG-CACC AGA GGTGACGGGATC         TTTTTTGTTTGCAAC 100 50
 CHQ57_14160 3081094 .. 3081118 + -11.3  -4.28069   GCCCATAAACAAAAA          GCCGTGGAACC AGA GGCACCACGGC          TTTCTTAAATTCTGT  93 377
 CHQ57_14200 3088262 .. 3088289 + -22.8  -3.33492   CAAGGACATAAACGA        GGGGGGATCGCC TGCT GGCGATCCCCCC         TTGTACACTGCGTCA 100 150
 CHQ57_14380 3127341 .. 3127367 + -11.6  -3.85698   GCCACTACTTCCCCA         GCCCCAGGTG ATAGCTA CACTTGGGGC         TTTCTAACCGGCAGA  88 279
 CHQ57_14390 3130158 .. 3130180 +    -7  -3.95036   CTCTAATTATCACCT           GACACCGG CCTCAAA CTGGTGTC           TTGTTTACGCTACTT  68 86
 CHQ57_14420 3139456 .. 3139475 +  -2.8  -3.74693   TCGCTTACCTGAGCC            TTTGGTAG CCCG CCGCCAAA             TTTGCTAGAGTAGCG  53 172
 CHQ57_14425 3140236 .. 3140251 +  -2.6  -3.01712   CCAGGTGTTGGGAGA              CAAGATG CGG CA-CTTG              TGTTAAAAAGCGGCA  42 62
 CHQ57_14430 3141517 .. 3141535 +   -16  -5.28176   GTTCGGAAAACAAAA             CGGGAGCC ACT GGCTCCCG             TTTTTTATAGCTGGC 100 47
 CHQ57_14470 NONE
 CHQ57_14475 NONE
        trpD NONE
 CHQ57_14485 3153479 .. 3153493 +  -3.4  -2.58544   GCTAGCTGCGGCTTT               TAGCGC CCT GCGCGG               CTTGTAACAGTGCCC  40 4
        trpB NONE
 CHQ57_14495 3155671 .. 3155689 + -11.7  -4.35524   CATCGCAGCATAAAA             GGGAGCC TGACC GGCTCCC             TTTTCCATTTCCCGA  95 114
 CHQ57_14545 3165493 .. 3165514 + -15.9   -4.4009   GCACTGATACGACAA           GAGGCCACC TGCG GGTGGCCTC            TTTTATGGCGTCAGA 100 51
 CHQ57_14550 3167365 .. 3167390 + -18.3   -5.4505   GTTAACTGAATACAA         CCGGCCCCATC TTCT GGTGGGGCCGG          TTTTTTATTGCCACG 100 47
 CHQ57_14555 NONE
 CHQ57_14560 3168656 .. 3168668 +  -4.7  -2.79796   CCGACCATGCCCCAT                GGCGG CGG CCCCC                TGTGATACACTCCGG  46 51
 CHQ57_14565 NONE
 CHQ57_14570 3170112 .. 3170131 +  -4.2  -4.24342   GCTCAAGGCCTTTAT            TTGATGCC ATTT GGCACCGA             TTTGTTGCTGGCGGG  62 22
        mnmA 3171460 .. 3171470 +  -2.4  -3.53012   GCTGAAACAGTGCGT                 CAGC CAT GCGG                 TTTGGGCCAACAAAG  47 106
 CHQ57_14580 NONE
 CHQ57_14585 3173750 .. 3173791 + -13.7  -4.57073   GCCGATAACCTGATA CATCAGGGGCCCTG-TGCAC ATT GCGCAACAGGGCCCCTGTTA TTTTTGACGGCCATA 100 41
 CHQ57_14590 3175056 .. 3175072 + -10.8  -4.72272   GACAAAGACGAAAAA              GGCGCC TTGAT GGCGCC              TTTTTCATGAGCGGC 100 52
 CHQ57_14625 3182702 .. 3182728 +  -8.1  -5.29782   GCTGATGTGTAAAAA         TCCGAAACC TGTTGATTT GGTTTCGGA         TTTTTTATGCGTATC 100 259
 CHQ57_14630 3184424 .. 3184436 +  -4.8   -4.0828   GGATGATGGGATTGT                CAGC CAGCT GCTG                TTTGATCTTTTCAAT  61 386
 CHQ57_14640 3185351 .. 3185369 + -17.4  -5.24129   CGCTTCTTGCCAAAA             CGCCCCGC ACT GCGGGGCG             TTTTTTATGGCAGAA 100 45
 CHQ57_14850 NONE
 CHQ57_14855 NONE
 CHQ57_14860 3224986 .. 3225004 +  -9.5  -2.50988   CAGGGCAATCATCTC             CCGCCCC TTGCC GGGGTGG             ATCTTCATGATCTCG  62 465
 CHQ57_14880 3227967 .. 3227977 +  -5.4  -4.43669   GAAATTCTTCTCGGC                 TGAC TCA GTCA                 TTTCATTTTTTCAGT  70 253
 CHQ57_14895 3230599 .. 3230615 + -10.9  -3.54414   CTGCGGATAGCATCA              TCAACGC AAT GCGTTGA              TATTTAATTGAACAT  78 358
 CHQ57_14905 3232588 .. 3232610 + -13.5  -5.38054   GGCGCCAATAAAAAA           GCCAGTCAG TGACC CTGACTGGC           TTTTTGTTTATCCAC 100 72
 CHQ57_14920 NONE
 CHQ57_14925 3236635 .. 3236653 +  -2.4  -3.29829   TGCGTGGAGAACGCC             TGCCAG ATAATGC TTGGCA             TTCTGCCCCGGTGTG  44 421
 CHQ57_14975 NONE
 CHQ57_14980 NONE
 CHQ57_14985 NONE
 CHQ57_14990 NONE
 CHQ57_14995 3263631 .. 3263662 + -13.9  -5.17507   ACCGGCCTCAAGGGC      TAATGCCAGTCAG TTAAGC CTGACTGGCATTG       TTTTTATTGGCTTTT 100 228
 CHQ57_15010 3267411 .. 3267435 +  -7.8  -2.87132   CCACTCCTCCTGAGG         CA-ACGGGGGC CCCG GCCCCCGGCTG          TCTATGCCACCCACC  58 28
         pyk 3269031 .. 3269048 + -12.7   -4.7373   TCCCATCAACGAAAA             CGGCTCC CGCG GGAGCCG              TTTTTAATGGACTGG 100 45
 CHQ57_15065 NONE
 CHQ57_15070 3279455 .. 3279471 + -13.7  -6.08342   GAACCTGATGAGAAA              CCGGCCA ATC TGGCCGG              TTTTTTTGTTTGTTA 100 57
 CHQ57_15085 3282761 .. 3282779 + -13.8  -4.67038   TTCACCGATAAAAAA             CCGGCGCT CAT GGCGCCGG             TTTTGCTTTTCAAGA 100 53
        manA 3286510 .. 3286539 + -15.9  -5.27938   ATGAGTGAATAAACG       C-ACAAGGGCCATC ACT GATGGCCCTTGTTG       TTTTTCTTTGGAAAT 100 64
 CHQ57_15110 3289499 .. 3289514 + -11.8  -4.30416   CGCAGATATAACAAA              GGGGCC GCGA GGCCCC               TTTTGGCTTGCTGAT  95 58
 CHQ57_15115 NONE
 CHQ57_15120 3290911 .. 3290930 + -16.4  -3.59698   GCCTCGAAATAACAA            CCGCCGCC CGAG GGCGGCGG             TTCTCTATCCGGTAA 100 29
 CHQ57_15135 3295204 .. 3295214 +  -6.8  -3.28791   CAGGCCATTGGATGA                 TCGG GAA CCGA                 TTATCACCACGCGCT  59 101
 CHQ57_15140 3296873 .. 3296885 +  -6.3  -5.06414   AGTAGAGTGGGCAAT                CATCA AGT TGATG                TTTTTATTGAAAAAG  86 224
 CHQ57_15145 3298086 .. 3298108 +  -8.4  -4.93877   AGCCAGAAAATAAAC           ATGCCCACTT CAT GAGTGGGCAC           TTTTATTTGGTCCGC  93 53
 CHQ57_15150 3300290 .. 3300314 + -17.9  -3.91897   CAAAAAACCAAACAA          GAAGCCCGCCG AAT TGGCGGGCTTC          TTTATCGATGGCACA 100 58
 CHQ57_15180 NONE
 CHQ57_15185 3310514 .. 3310534 + -18.3  -3.88766   CTTCGCCATAAAAAA            CGGGCCTCC CAT GGAGGCCCG            TTTGCTGTGTGCCAT 100 54
 CHQ57_15205 3314813 .. 3314828 + -11.8   -5.1356   GCGCATCATAAAAAA              GCCGGG GCAG CCCGGC               TTTTTCTTCATGACA 100 427
 CHQ57_15220 3316673 .. 3316709 +  -5.6  -3.16117   AAGAGAAGCCATAAG    CCGTATGGCCCCGCTG AAAAA CAGCGGGGCCGGCCCA    TGTTCAATTGCCTGT  52 27
 CHQ57_15225 NONE
 CHQ57_15230 3319588 .. 3319604 +  -3.7   -4.3586   GACATGAGCATCCCT              GACATGA AGA TCATCTC              TTTTAATATCAATGG  65 162
 CHQ57_15235 3320586 .. 3320615 +  -5.1  -2.99813   CATTGGAGCTGACAA       CATTCAACACCGAG CAG CTTGG-GTTCAATG       TCTGTGCTCTATCAT  50 214
 CHQ57_15240 3321996 .. 3322007 +    -3  -3.44051   CCATCTTTTCCTGTG                TGAT ATCA ATCA                 TTATCGTACTGGCAG  49 78
 CHQ57_15260 3327173 .. 3327191 +  -3.9  -3.84451   CAGCAGATGCCTTGA            CCTT-CTC CCGC GAGTAAGG             TTTAGATTTGCCCCA  56 26
 CHQ57_15265 3327783 .. 3327815 +  -2.6  -3.53091   AGCAATAGCAGGGAA     CCGTGCGTACGCTGA CTCG TCAGCA-ACGCCCCG      TTTGCCGCCCAGCCT  47 126
 CHQ57_15270 NONE
 CHQ57_15275 NONE
 CHQ57_15280 3333084 .. 3333128 + -15.9  -2.70525   AACAGTGAATTGACG GACAAGATAAACGGCGGGA CTCTCCA TCCCGCCGTTTATCTTGAG GTTCGTTTGGGCACC  95 33
 CHQ57_15290 3337158 .. 3337172 +  -6.4  -2.71791   TCATCGCCGCCAGCG               CCGTCA GCA TGATGG               GTTTGGCCCGCACCT  50 206
 CHQ57_15320 3342709 .. 3342751 +  -5.7   -3.6164   GTACTGCGCAGGCTG GGTTGTCGCTGATGT-AGCC AACT GGCTCACATTATTGACAAAC TTGTATCTAAATGTT  58 14
 CHQ57_15325 3343452 .. 3343476 + -11.3  -2.56596   AGCTATCAGGTAAAT          CCGGGGCCAGC CAT GCTGGCCCCTC          TCCATTGATCCGGCA  73 42
 CHQ57_15330 3344746 .. 3344764 +  -6.6  -3.71284   GATTCAGGCCATCTA             CGACGCTG GCT CGGCTTCG             TTGTCTTGGTCCCGG  66 377
 CHQ57_15340 3348153 .. 3348178 + -19.1  -3.04853   ACCTGTCAAAAACAA         GAGGGGGAAGC CGAT GCTTCCCCCTC          TCTCATTTCGCTTTA 100 88
 CHQ57_15355 3350843 .. 3350868 + -14.7  -3.48276   ATGCAAAAAAATGCA         AACGGGCAGCC ATCA GGCTGCCCGTC          TTGTCTCCGGCGAGG 100 44
 CHQ57_15365 3351855 .. 3351884 + -11.4  -4.61868   CTTCCATACACGTTT       TTGCCCGC-CGGC TAGTC GCCGCGCGGGCCA       TTTTCTATGTCGGTG 100 70
 CHQ57_15445 3367392 .. 3367409 + -14.1  -4.06611   CACACTCATGAGAAA             GGGCGCC TGCG GGCGCCC              TTGTTGTTATGGTTC 100 47
 CHQ57_15455 3369272 .. 3369299 + -18.6  -3.70902   CGCTGCAGCACAACA        CAAGAAGGGAGC CTCG GCTCCCTTCTTG         TTTGCATATCAACGC 100 56
 CHQ57_15470 3371836 .. 3371863 + -18.6  -3.12327   GCGACAGGCAGACAG        CAAGAAGGGAGC CGAG GCTCCCTTCTTG         TATTGCATATCCACG 100 74
 CHQ57_15500 NONE
 CHQ57_15505 NONE
 CHQ57_15510 3380708 .. 3380731 + -12.4  -5.72616   GGATGTGCTGCTTTT          CGCCCCGTTA TGCC TACCGGGGCG           TTTTTTTGTCTGCAT 100 60
 CHQ57_15515 3381580 .. 3381592 +  -6.3  -3.54424   AACACAGCCTGGGCC                TGCAT TGA ATGCA                TTTCGCCCCCTGCGC  58 18
 CHQ57_15520 3382072 .. 3382100 + -16.1  -3.40558   GCAAACAGCAGTAAT        GAAAAATCCCGGC CTG GCCGGGATTTTGC        TATTTAACCTCTGTA 100 27
 CHQ57_15545 3386822 .. 3386870 + -20.6  -2.82516   GTGGCGCGACTAACG CCCTG-AAACAACAAACCCGGCT GGAT GGCCGGGTTTGTTGTTTTCAGCG TATCGTCATCGCCAG 100 28
 CHQ57_15565 3394405 .. 3394421 +  -9.4  -4.86862   GCCCCAATGAAAAAA              GGCACC TCATC GGTGCC              TTTTACTTTTTTGCA  95 46
 CHQ57_15570 3395188 .. 3395202 + -11.4  -5.36441   GCAGACAACAAAAAA               GCGCCT GAC AGGCGC               TTTTTTGTATGGAGA 100 73
 CHQ57_15595 3399543 .. 3399558 +  -3.3  -3.71378   GGTTTAATAAATAAT              TTTCC AAATAA GGAAA               TTTCCATGTCGCATG  53 60
 CHQ57_15600 NONE
 CHQ57_15605 NONE
 CHQ57_15610 3402171 .. 3402190 + -13.6  -5.36965   CGCCATATCCAAAAA            TGCCGGTC ACTT GACCGGCA             TTTTTTATGGTCTTC 100 55
 CHQ57_15620 3405562 .. 3405595 +  -3.7  -3.74693   CAACGCGGCCCTGCT     GGCGGCGCTGACCGGC ATC GACG-TTATCGCCGAC     TTTCGTACCATGGAC  56 461
 CHQ57_15630 3408431 .. 3408452 + -15.9   -4.8667   TTTAAATGATAAAAA           GACACCGGC ATAA GCCGGTGTC            TTTTTATCGAGTGTC 100 48
 CHQ57_15645 3412783 .. 3412809 +   -16  -3.16068   AGTCGCCAGTTGTGA         TAAAAGGGGAGC CTG GCTCCCCTTTTG         CTTTTCCGTTACCCG 100 42
 CHQ57_15650 NONE
 CHQ57_15655 3414165 .. 3414177 +  -6.3   -3.9461   ACCTATGGGCACAAG                GGATT TAA AATCC                TTCTTCTTGAACCAG  65 45
 CHQ57_15660 NONE
 CHQ57_15665 3416176 .. 3416202 +  -8.1  -5.29782   GCTGATGTGTAAAAA         TCCGAAACC TGTTGATTT GGTTTCGGA         TTTTTTATGCGTATC 100 125
 CHQ57_15670 3418034 .. 3418079 +  -7.6  -2.78816   CCGCGACCCTGATCG CCAGCCCGC-GCCGCTTCGATG GCCG CATTG-AGCGCCAGCAGGTTGG TCTGCTCGGCAATGC  53 522
 CHQ57_15680 3419886 .. 3419909 +  -8.8  -3.55203   CATTCATCTATCCAG          CGACATCGGC CATA GCTGATGCCG           TTTGCCACGCATTTT  67 7
 CHQ57_15685 3420405 .. 3420431 + -15.2  -2.87243   CTGTTATCCCCCTCA         CGAGAGGGCC TCTCTCT GGCCCTCTCG         TCCTTGTCATACTGC  95 57
 CHQ57_15695 NONE
 CHQ57_15700 NONE
 CHQ57_15705 3425937 .. 3425961 + -20.1  -3.21925   GGATCCACCAAAACA          GAAGGGGAGCC AAT GGCTCCCCTTC          TTCATCATCCCATGT 100 72
         tal 3429152 .. 3429175 + -19.6  -3.86916   AGGACCAGACAGAAA          CCGGGCTCCC GCGA GGGAGCCCGG           TTTAATGTGATGGTC 100 50
 CHQ57_15720 3430533 .. 3430549 +  -2.3  -3.29325   GGCTTCTCTAGACAC              TTTTGAG CCG TTCGAAA              TATTGCTTCTCACAC  45 276
 CHQ57_15730 3432095 .. 3432121 + -22.4  -4.68424   AGCGAACTGTAAAAA         CAAGGCCCCGGT TCA ACCGGGGCCTTG         TTTTTGAGTACCTTG 100 29
 CHQ57_15750 3434648 .. 3434663 + -11.8   -5.1356   CTGCACACTGACAAA              CGGCCC ACGC GGGCCG               TTTTTGTTGGTACGC 100 57
        lolB NONE
 CHQ57_15790 NONE
 CHQ57_15795 3442234 .. 3442250 +  -4.3  -3.14683   CCGGGTTAATCACGA              AGAGGTC ATC GGCCTCG              TTGATGACGGGCTGT  49 139
 CHQ57_15800 3443392 .. 3443421 + -19.5  -3.88787   GATAGACACTGTTGT       GACAAAAACCGCC AGCT GGCGGTTTTTGTC        TTTCTAGCCCTGTCA 100 39
 CHQ57_15805 3445497 .. 3445517 +   -14  -2.73159   TAATAATGACCAGAA            CGGGCCTC GAGAA GAGGCCCG            CTTTGCGGCCATTCG  85 54
 CHQ57_15810 3446300 .. 3446314 +  -2.1  -3.06696   GGGGTGAATGTCCAC              CTG-CG CCAC CGACAG               TCTGTTCAAACACGC  42 64
        ychF 3447533 .. 3447554 + -15.9  -4.65446   CGTCTAATCCCATGA           GAGGCCAGC ATTT GCTGGCCTC            TTTTCTATCTGTACT 100 34
 CHQ57_15820 NONE
 CHQ57_15825 NONE
 CHQ57_15830 NONE
 CHQ57_15835 3448165 .. 3448182 +  -8.5  -3.86202   AGCCATTTTTACCCG             TCATCGA ATTG TCGATGA              TTTGCTGTGGTAAAC  74 36
 CHQ57_15840 NONE
 CHQ57_15845 3448464 .. 3448481 +  -8.5  -2.87468   AGCCATTTTTACCCG             TCATCGA CATG TCGATGA              TCTGCTGTGGTAAGC  61 36
 CHQ57_15850 NONE
 CHQ57_15855 3448779 .. 3448792 +  -8.1  -5.65177   CCAGTACCAAACAAA               CCAGC TCAT GCTGG                TTTTTTTGTACCTGT 100 47
 CHQ57_15865 NONE
 CHQ57_15870 3452606 .. 3452630 +    -7  -3.17212   CACATTCAATGGCAC          GGGCGCTGGT ATCCG GCCCGCGCTC          TTGCTAGCCTCATGG  57 108
 CHQ57_15875 NONE
 CHQ57_15880 NONE
 CHQ57_15885 3454195 .. 3454218 +  -6.7  -2.54171   CCACGCATGTGGCAA          GGGAGGG-CG GCCTG TGACCCTCCC          CTCATTTTTGACAAT  52 81
 CHQ57_15890 3456245 .. 3456255 +    -4  -4.58303   TATTGAATGGTTATT                 TACA GGA TGTA                 TTTTGTGCTGTTTAG  67 331
 CHQ57_15905 NONE
 CHQ57_15910 3461652 .. 3461671 + -12.8  -3.57462   TGCGACCTATCCATG            GCCGGTGG ACAA CCGCCGGC             TTTCAAACTGGCATA  88 359
        nifJ 3465283 .. 3465301 +   -16  -3.06162   ACCGGATAACAAAGA             GGGCTCCC GTT GGGAGCCC             TCTTCACATCCAGTC 100 64
 CHQ57_15925 3467631 .. 3467646 + -11.8  -4.57073   AAACGCCATAAAAAA              CGCCCC TTTC GGGGCG               TTTTTGCCAACCATC 100 183
 CHQ57_16020 3488483 .. 3488510 + -14.2  -4.84359   AGCAACACCAGATGA        CAAAACCGGCGC CAAG GCGCCGGTTTTC         TTTTTCTACGCCTGC 100 40
 CHQ57_16045 3494073 .. 3494088 + -11.8  -4.27259   CGACGCCATGCAAAA              GGGGCC CGCA GGCCCC               TTTTCACTGTATATC  93 43
 CHQ57_16055 NONE
 CHQ57_16060 3496854 .. 3496884 + -13.5  -4.11216   GCAGACCGGATAAAA      CAGAAAA-GGCAGC CAGG GCTGCCTTTTTCTG       TTTTGGGGATACCGC 100 77
 CHQ57_16070 NONE
 CHQ57_16075 NONE
 CHQ57_16080 3504435 .. 3504451 + -10.8  -5.60993   TCAGCACAAACTAAA              GGGGCC ATGTA GGCCCC              TTTTTTTATGAAAAA 100 41
 CHQ57_16085 NONE
 CHQ57_16090 NONE
 CHQ57_16095 NONE
 CHQ57_16100 3508255 .. 3508271 + -10.8  -5.29782   GACTGATTGACCAAA              CCGGGC CAAGT GCCCGG              TTTTTTATGGCTCTC 100 50
 CHQ57_16120 3511920 .. 3511930 +  -2.4  -3.47307   TGTTCAACTGCCCGC                 AGCG GAG CGCC                 TTATGATGCTGTTCG  47 9
 CHQ57_16125 NONE
 CHQ57_16130 NONE
 CHQ57_16135 NONE
 CHQ57_16140 3515684 .. 3515717 +  -7.3   -2.9462   AATCAGTGATGTAAA     CTCTGCCCGCCCG CTTGCATA CTGGTGGGCAGCG      TCGTTTACGTCACTG  54 53
 CHQ57_16145 NONE
 CHQ57_16150 3517989 .. 3518012 + -16.8  -3.20435   CTGATCCGAAAACGA          CAACGCCTCC CGAG GGAGGCGTTG           TTCATGGATAGTTCG 100 37
 CHQ57_16170 3522038 .. 3522061 + -13.9  -5.77988   TTAGAAGCCAGCCAA          CCGGTGTGC TACCCT GCACACCGG           TTTTTTTGTATCTCT 100 100
 CHQ57_16175 3523298 .. 3523319 +  -3.7  -3.64812   ATCTGGCAGTTTTTA           TCC-GTCCGT TTC ACGAACAGGA           ATTTTTTACATGAAA  53 40
         efp 3523923 .. 3523939 + -13.7   -5.5112   ATTGAATGCAAAAAA              GCGAGCC ATT GGCTCGC              TTTTTTATTGCTCCC 100 53
 CHQ57_16185 3524857 .. 3524906 +  -5.1  -3.52117   GCTCCCTAGCGCCCA TATTTGGCATCATGACGGCTCC AATGGCA GGAGGCGTCATGCAGC-AGATA GTTTTTCTCGATAGC  56 115
 CHQ57_16190 3526140 .. 3526165 +  -5.3  -5.33026   CGCCACCCAGTGCAC         CGACGGCGCCCC CCA GGGCCGCC-TCA         TTTTTGTTTCCCTTG  91 314
 CHQ57_16205 3529105 .. 3529123 + -13.1  -3.02371   CCACATCCGCTTCAA             GCCCCCG CTGGT CGGGGGC             TGCTTGTTTCCAGAC  83 49
 CHQ57_16220 3531237 .. 3531259 + -13.4  -3.21747   TGCCGATACTGGCGC           TGAGCCGGGC ATC GCCCAGCTCA           TTCATACTCAACTCC  78 166
 CHQ57_16240 NONE
 CHQ57_16245 NONE
 CHQ57_16250 3537516 .. 3537551 +  -6.1  -3.48276   AAAGCGTAAAGGGCG    GGAGAGTCATCGTCT TGAAAC AGCCGATGACCATCC     TTATATCACCAAGAC  58 40
 CHQ57_16255 3538537 .. 3538568 +  -7.9  -3.72576   TATCTTGCCGTGAAG      CATC-AGCGCCCCG CTCGT CGGGGCGCTTGCCG      TTTGGTGGCAGGGCA  69 73
 CHQ57_16260 3540349 .. 3540366 + -14.1  -3.13784   CACATTAACAAAAGA             GGCGCCC CATG GGGCGCC              TCTTGCCATTTCATT  89 62
        leuS 3543746 .. 3543770 + -13.6  -3.17075   GTTGCCAATCATGAT         GA-CGGCGGGC AGAC GCCCGCCGCTC          TTCACTTCACGCAAA  89 141
 CHQ57_16275 3544278 .. 3544289 +  -4.4  -3.16191   GCCAGGTCAAGTTCT                GATG CGAG CATC                 TTGATGAGAGTCTAC  49 24
 CHQ57_16280 3544435 .. 3544445 +  -3.2  -2.87211   TCAACTAGGCCAAGT                 TCTG ATG CGGA                 TCTATCCCGAGCAGT  42 33
        holA NONE
 CHQ57_16290 NONE
        rsfS NONE
 CHQ57_16300 3547252 .. 3547276 +  -3.5   -3.4439   ATCACCCGTATCACA          GGGAATAACCC ATG GGGTTTTTGTC          TTCTCCCTTCGTCTG  51 72
        mrdA NONE
 CHQ57_16310 NONE
        mltB NONE
 CHQ57_16320 3552235 .. 3552250 +  -6.8  -3.20382   TGTGGTTCATATGAA              GGTGGC CACC GCCATC               TTGATGGGTATCACG  57 45
 CHQ57_16325 3553577 .. 3553589 +  -9.1  -2.73364   GGATTACCTGGTACT                GCTGG TCA CCAGC                TGGTTCAAGTAAGCC  63 1
 CHQ57_16330 3554155 .. 3554172 + -12.7  -3.75517   TGTAAGCCACCTCTC             TCGCCCC GTCA GGGGCGA              TTGATTTTGTGCAAT  91 36
 CHQ57_16335 NONE
 CHQ57_16340 NONE
        lipA 3556032 .. 3556058 +  -7.9  -4.78107   GGCTATATATGTCAA         AAGAGGGAGGC TTCAC GCCTCCCTCAC         TTTTTAGTGCTGATA  90 103
 CHQ57_16350 NONE
 CHQ57_16355 3557636 .. 3557649 +  -2.3   -4.9755   CGCCCCGGCCAGTTG               CCGCA GCGG TACGG                TTTTTCATTCTCTGT  71 115
 CHQ57_16360 3558266 .. 3558283 + -12.7  -4.08767   CGCTGAATAGCAAAA             CGGCCAC GCAA GTGGCCG              TTTTCACAGGCTGCG  95 31
 CHQ57_16385 3562898 .. 3562921 +  -3.8  -5.60689   TGTGTTCGAAAAAAA          CCGCCC GGGTGAAGTAAA GGGCGG           TTTTTTGTTGTGTGA  93 57
 CHQ57_16395 3564677 .. 3564690 +  -3.7  -5.32882   TCGGTATCATCGCTT               GACGC TATA GCGAC                TTTTTTGTGCTGGTC  86 111
 CHQ57_16400 NONE
 CHQ57_16405 3567578 .. 3567602 + -20.1  -5.55769   CGTTCTGAACAGCAA          GAGGGCAACCC CAA GGGTTGCCCTC          TTTTTTATTCTGACC 100 75
 CHQ57_16410 3568076 .. 3568101 + -19.1  -2.72049   CGAGGACAGAAACAA         CAACGGCGACC ATAA GGTCGCCGTTG          TCATTACCGAGTCTC 100 50
 CHQ57_16440 3575383 .. 3575412 + -22.3  -4.07885   AACGAGCGTTTTCAA       CAATCAGGGGGCC CGCG GGCCCCCTGATTG        TTTTCAAACAAAGTG 100 43
 CHQ57_16445 3576407 .. 3576437 + -16.2  -4.63218   CGGTTTGCCATGCTG       TAAGGGGCAAGGGA TCT TCCCTCGCCCCTTG       TTTTGTTAGACGGGA 100 97
        fumC 3577875 .. 3577904 + -19.5  -3.37464   GTGCCTGCTGAAAAA       TGAAAAAGCCGGG CATG CCCGGCTTTTTCA        TTGTGCAATTCGTCG 100 46
 CHQ57_16460 3578861 .. 3578877 +  -5.7  -2.72144   GCGCAAGTCTTGATC              GGCGGGG AGC CTGCGCC              ATTTGAAAACCATCA  48 60
 CHQ57_16465 3580494 .. 3580514 +  -9.7  -2.72829   CGGTCAGTGCATTGG            TGGTCACCA GGA TGGCGACCA            GTTTCGCCACCTCTG  57 471
 CHQ57_16550 3597197 .. 3597217 + -14.1  -3.58779   GCCCCGCAAGTAACA            GGAAAGAGC CTC GCTCTTTCC            TTCATTTCCCTTCTT 100 28
 CHQ57_16555 3597900 .. 3597920 + -12.5  -3.55563   CCCGCTAAATACAAA            CAGGGGAGC CGA GCTCCCCCG            TTTCAGGCATCACCT  86 33
 CHQ57_16565 3598793 .. 3598807 +  -4.2  -3.49756   AAGATCGCAACATGG               CGTCAG GCT CTGGTG               TTGTAATAGTTGTTG  51 111
 CHQ57_16590 NONE
 CHQ57_16595 NONE
 CHQ57_16600 3604820 .. 3604852 + -15.8   -4.3208   TCGTTGACGAGCAAA     TA-AAGAAGGGCGCC TGAT GGCGCCCTTCTTGTA      TTTTCACTTCTGACC 100 47
 CHQ57_16680 3620284 .. 3620300 + -11.5   -5.3236   AATATTTCCTGAAAA              CGTCGCC ATC GGCGGCG              TTTTTTCTGGCTTGT 100 220
 CHQ57_16690 NONE
 CHQ57_16695 NONE
 CHQ57_16700 NONE
 CHQ57_16705 3623388 .. 3623414 + -10.2  -3.05384   CCGGCAACACGACCA         GATAGGGGGC AAATACA GCCCTCTATC         TTCCCTCCAAAGCGC  69 53
 CHQ57_16710 3626290 .. 3626306 +  -5.1   -4.7497   CAACATGGCTATCTC              CATCGAT AAA ACCGATG              TTTTTACTCAATCAC  78 380
         acs 3628420 .. 3628436 + -10.8  -4.04719   TTATCTGCCTCCAGA              GCCGGC CCAGT GCCGGC              TTTGTCGTCTCTGCT  88 50
        aroQ NONE
        accB NONE
        accC 3631103 .. 3631122 + -13.6  -5.70522   ACCTCTGTTGAAAAA            GGGCCATG GCGA CATGGCCC             TTTTTTGTTATTCTT 100 170
 CHQ57_16740 NONE
 CHQ57_16745 NONE
 CHQ57_16750 NONE
 CHQ57_16760 NONE
 CHQ57_16765 3637852 .. 3637880 + -21.9   -3.5627   GGCAACCACCTCATA        CAACAAGGGCACC GAT GGTGCCCTTGTTG        TTTCCGCCATCCTCT 100 42
         eat 3639539 .. 3639559 + -11.2  -3.53811   TGTGCCCATCAGGAG            CAAGGCCA CGCGC TGGCCTTG            TTTCCCCACCCTGCA  78 52
 CHQ57_16775 NONE
 CHQ57_16780 NONE
 CHQ57_16785 3642987 .. 3643001 +  -5.7  -2.70826   AGGCTCACTCTTATC               CTGCT GACAA AGCAG               TAATATATGCCTCTG  48 40
 CHQ57_16790 3643749 .. 3643769 +  -2.4  -3.85509   AGCGGTCGATACAGT            GCACCACC TGCAT GCTGGCGC            TTTCCATTGTCTTGA  54 104
        sppA 3650055 .. 3650066 +  -7.2  -5.83822   ACTCGCAATAAAAAA                CGCC TTCG GGCG                 TTTTTTTTGCATCTG 100 47
         gap 3653121 .. 3653145 + -14.4  -2.51312   TACCTGCATAGCCCG          CCAGGATCTG CCCGT CAGATCCTGG          GTTCATGGCTCAATT  89 53
 CHQ57_16830 3653506 .. 3653534 + -17.5   -4.3467   TCGCACACCATAGCA        AAGAGGGGAGCCA TAA TGGCTCCCCTCTC        TTTTCCTCTCCCCCT 100 61
        gltS 3656422 .. 3656457 + -17.8  -3.54741   CTAGCATTTCTCCAC    T-CAGAACCCCCGATGT ACT GCATCGGGGGTTCTGTA    TTTCAACGCATGATG 100 89
        lysS 3662601 .. 3662620 + -16.4  -5.24129   TCGATGGCAACGAAA            CGCCCCGC AACT GCGGGGCG             TTTTTTATGGCGAAC 100 68
 CHQ57_16870 NONE
        cysI NONE
 CHQ57_16880 3667981 .. 3668002 + -18.7  -4.44245   TCTGACAATAAAAAA           GCGCCCGGC AACT GCCGGGCGC            TTTTATGGATGATAT 100 55
 CHQ57_16920 3675316 .. 3675342 + -16.6  -3.34652   CAAGAAATAGGTAAA         TGGACGGGGGAT GTG AACCCCCGTCCA         TCTCTTATTTGCGGC 100 31
 CHQ57_17015 NONE
 CHQ57_17020 NONE
 CHQ57_17025 3693285 .. 3693308 + -16.8  -2.71144   GACCTGAACGACTGA          CAACAGGGGC CCAG GCCCCTGTTG           TCGTTACCGCGAGTC 100 26
 CHQ57_17040 3696513 .. 3696530 + -12.7   -4.8622   CGCCGAAATAGAAAA             GAGGGCC AAGG GGCCCTC              TTTTTCATTCACCGC 100 60
 CHQ57_17095 3710613 .. 3710649 +   -11  -3.14132   TCTCGGCCAGGGTGC   CGCTGCGGATCAGGCGCA CCA TGC-CCTGATCC-CAGAG   TTGCTGCAGGCGGGC  69 120
 CHQ57_17105 3711923 .. 3711947 + -17.3  -3.24232   CGCCAATCAACGAAC          TAAGGCCAGCA CTC TGCTGGCCTTA          TCTCTTTCAGAAACG 100 50
 CHQ57_17150 3720191 .. 3720211 + -10.4   -5.0133   TAGCACTATGATTTA            TGCCCCGC CCAGT GCGGGGTA            TTTTTTGCAACCGTC 100 101
 CHQ57_17155 3720744 .. 3720761 + -12.7  -5.87996   CTCCAACCATGAAGA             TGGGGCC CACA GGCCCCA              TTTTTTTATTGCTTC 100 159
 CHQ57_17185 3730472 .. 3730491 + -16.4  -3.53811   TGATATATGACCCAA            GCCGGCCC GGTC GGGCCGGC             TTTGCCCAACGTCCA 100 51
 CHQ57_17190 NONE
 CHQ57_17195 NONE
 CHQ57_17200 NONE
 CHQ57_17205 3733696 .. 3733729 +  -2.3  -2.72043   CCAACAAAGACGGCT     GATGCCAGGGGTCAC CTAT GAGATACCTGATATC      CTTTGCCGCCGCCTT  39 24
 CHQ57_17210 NONE
 CHQ57_17215 3735734 .. 3735753 + -11.4   -5.4251   GCCTTGGTGGCAATT            GGCCGCTC TTCG GAGCGGTC             TTTTTTATATCTGCG 100 164
 CHQ57_17225 3741589 .. 3741606 +  -9.8  -5.00616   GCCATCACGCCAAAA             GCCCGC TGCGAT GCGGGC              TTTTTTACGGGCAGG 100 50
 CHQ57_17265 3746493 .. 3746520 +   -17  -3.59979   ACAATTTTCCTCTCT        CGGACTCTCCCC CTCG GGGGCGAGTCCG         TTTACCATAGGCAAC 100 40
 CHQ57_17270 3747236 .. 3747258 + -10.5  -4.72272   TCAAGGAGTGACAAA           ACGGGAGGC CATGA GCCTCCCGC           TTTTTGATCCAGCAC 100 30
 CHQ57_17275 3747731 .. 3747753 + -12.1  -5.47218   ACGCCAGTGAGCCTG           TAGGAGGAG ACCTG CTCCTCCTA           TTTTTTTGCCTGCCG 100 44
 CHQ57_17320 NONE
         psd NONE
 CHQ57_17330 NONE
 CHQ57_17335 NONE
 CHQ57_17340 3752628 .. 3752651 +   -21   -5.4433   TGCTGACGCTCCGAA          CGCCCCCGGC CCCT GCCGGGGGCG           TTTTTCTTTATGTCT 100 55
 CHQ57_17350 3755487 .. 3755504 + -11.3  -5.18726   CGCAGACAAAACAAA             GGCCACT CGAA AGTGGCC              TTTTTGTTGTCCGGC 100 42
 CHQ57_17360 3758607 .. 3758622 + -11.8   -4.8622   CATCCAATGCACCCA              GGGGGC TCAG GCCCCC               TTTTTCATTGCCCAC 100 43
 CHQ57_17365 NONE
 CHQ57_17370 3758949 .. 3758967 +   -16  -5.65177   AGCCAAATTTGAAGA             GCCCGCTC ATA GAGCGGGC             TTTTTTTATGCCTGT 100 36
 CHQ57_17400 NONE
 CHQ57_17405 3770053 .. 3770078 + -15.5  -4.00042   TGACACGAGAAACAA         CAAGGGCTGCT CGCG GGCAGCCCTTG          TTCTTTGGTGGAGCC 100 38
 CHQ57_17435 3775415 .. 3775435 + -12.6  -5.35222   CGGCCGATAATATTC            GGGCAGGT GCCAA ACCTGCCC            TTTTTTATCGATTTT 100 113
 CHQ57_17440 3776753 .. 3776776 + -13.2  -5.68438   CTGAATAAAGAAAAA          CCAGCGATCT GTCC AGGTCGCTGG           TTTTTTATTTCCTCG 100 53
 CHQ57_17450 3779603 .. 3779634 + -24.6  -4.56597   GATGATTGCCGAAAA      TGACAAGCCCGGCC ATGT GGCCGGGCTTGTCA       TTTTTGCGCAAAAAG 100 55
 CHQ57_17465 3783504 .. 3783531 + -18.6  -3.65351   CCTGTCGGCCCAAAA        CAAAGATCCCGC CGAA GCGGGATCTTTG         TTTCCATGACCATCA 100 74
 CHQ57_17480 3794213 .. 3794226 +  -2.3  -3.06737   CGGTCACGGTCAGGG               TGACC TGCT GGCCA                TCTTCCACATTGCTG  42 83
 CHQ57_17490 3807196 .. 3807211 +  -6.1  -3.41229   TCCACACTGAAGGTT              CCGTC CGGGTT GACGG               TTGTGGTCAGGGTCT  56 68
 CHQ57_17495 3808289 .. 3808303 +  -5.6  -2.84723   GAACCCGCCAGCAAA               CCGCAC AGG GTGAGG               TAGTTCATCTTGCCA  48 409
 CHQ57_17510 3812285 .. 3812314 +  -2.9    -3.551   CGGCCGGGAACTGGA       CGCCAAATGAG CGGTCTTA TTCATTTGCCG        TTGTCTACCTTGCAG  49 16
 CHQ57_17515 NONE
 CHQ57_17520 3813282 .. 3813300 +   -16  -4.18802   GGCGAAAACGCAAAA             GGCCGGAC AGT GTCCGGCC             TTTTCACATCTGTGT 100 53
 CHQ57_17530 3814617 .. 3814640 +   -11  -4.66987   GACATCTTCCATCAT          G-AGGGCGGCC TGT GGCTGCCCTAC          TTTTCTTCGGGTATC 100 49
        galU 3815638 .. 3815655 + -11.3   -5.1417   ACAGAATAAAAAACT             GGGCATC GTTC GATGCCC              TTTTTCATTTTATAA 100 63
 CHQ57_17540 3817230 .. 3817264 + -30.2  -4.03234   GTCAGGATTGTAAAA     GACAAACGGGGCGCCC ACT GGGCGCCCCGTTTGTC     TTTGTCTGCCACAAA 100 44
 CHQ57_17565 NONE
 CHQ57_17570 3823384 .. 3823431 +  -2.5  -2.70932   GCCACTACAACGGCT GATCTCCAC-GCGAGCCCGTGCC AGCT GGC-CGGGCTCGCAGTGCCTCCC TGCTTACCCGCCACC  39 24
 CHQ57_17575 3824178 .. 3824197 + -13.6  -3.70902   CAGCCAATTAAAAAA            CGGTCAGC CTCA GCTGACCG             TTTCCATATCCGGCA 100 47
 CHQ57_17600 NONE
 CHQ57_17605 3830534 .. 3830559 + -11.3   -5.0925   GCTATTGAAAACAAA         GGTACTTTCAT TTTA ATGAAAGTGCC          TTTTTAGTTTTGAAC 100 55
 CHQ57_17620 3831884 .. 3831895 +  -4.4  -2.65376   TAAATGTTACACGAC                GAGA ACGA TCTC                 CATTTTCTTGCATTT  43 99
 CHQ57_17745 3852581 .. 3852591 +  -6.8  -3.60475   GGCGCACCGGGTATC                 GGTG TAG CACC                 TTTACCCAATTTATT  63 46
 CHQ57_17770 NONE
 CHQ57_17775 3860222 .. 3860240 +    -6  -3.52874   CTGATTGCAGTACTC             CGCTTAAG TAA CTTAAGAG             TGTTGTTATATAGGG  58 79
 CHQ57_17780 3861297 .. 3861314 +  -9.9  -3.31269   GTACGATAAGACGCT             TGAGCAC GTCA GTGCTCA              TTAGTATGCTATAGA  72 32
 CHQ57_17810 3865202 .. 3865247 +    -8   -4.6645   GAAACAGCAATAAAA TACCTAATAAAATCAATA TATTATATCT TGTTGATTTTATTGGGTA TTTTATATCTATCTG  84 86
        cadR NONE
 CHQ57_17835 3868338 .. 3868348 +  -4.6  -3.93913   TAATTGGTTTTGGGT                 GTGG CCC CCGC                 TTTGCGTTTCTCTTT  60 171
 CHQ57_17880 3881606 .. 3881625 +  -9.2  -4.25104   TGGTTACCCATAACT            GATGGGGG CTTG CCCCCACC             TTTTGATGCGAGACA  82 261
 CHQ57_17885 3882336 .. 3882361 + -13.3  -3.91911   ATCGCAGATATAAAA         AAGCCCCCATC GCGA GATGGGGGCTC          TTTCATTAGGGTCAG 100 61
 CHQ57_17915 3888878 .. 3888895 +  -2.7  -3.86194   CATCTGCATCCGGAA             CTGATTG CTGC CAATGAG              TTTGTCAGCCAGCTT  54 179
        aspA 3891155 .. 3891197 + -13.5  -4.37886   ATCCCGGCCCATAAA GTCAGTTCCCGATCGGTCT CACCC AGTCCCATCGGGAATTGGC TTTTCTGCCAAATAA 100 62
 CHQ57_17930 3892594 .. 3892610 + -10.8  -5.52023   CCATAAAAACTCAAA              CGGCCC TCATT GGGCCG              TTTTTTATTCCTCGT 100 54
 CHQ57_17935 3893881 .. 3893899 + -17.4  -5.49234   GCCTACTGTATTTTA             CCGGCCGC ACT GCGGCCGG             TTTTTTATTGCCTGT 100 55
 CHQ57_17945 3896520 .. 3896545 +  -5.9  -4.07885   TGCCACCCTTGGCGG         CGGAGAGCCCG GTCA CAGGCACCCCG          TTTTGCAGCACGCTG  65 285
 CHQ57_17955 NONE
 CHQ57_17960 3899872 .. 3899897 + -19.1  -3.06162   ATCACGCATAAAAAA         CGGGCCCAAAG TTAC CTTTGGGCCCG          TCTTCAGATGAGGTG 100 355
        rdgB 3903665 .. 3903683 +  -9.5  -5.67529   CATTGTCATCTACAA             TGGGGGC CGTCA GCCCCCG             TTTTTATTTTTGATT 100 65
 CHQ57_17995 3905023 .. 3905051 + -19.7  -4.21194   GTTTTCTCCATAAAA        CAATCAGGGCGCC ATT GGTGCCCTGATTG        TTTTGAATCCTGCCG 100 192
        purH 3908543 .. 3908561 +   -16  -4.91357   GTCACTGATGAGTCA             GGGTCGCC GCT GGCGACCC             TTTTGTTGTCTCTTT 100 33
 CHQ57_18020 3909973 .. 3909986 +  -9.5  -5.24129   CCATCATGATCATCA               GGGCC TGCG GGCCC                TTTTTTCTGCCCGGC 100 56
 CHQ57_18025 NONE
 CHQ57_18030 3911416 .. 3911432 +  -7.3  -3.42056   TTGATGCTACTGAGC              CGAACGA GGA TTGTTCG              TTGTCCGTTCGAAAT  61 293
 CHQ57_18035 3913800 .. 3913835 + -24.8  -2.62396   GGTTGCTGCCAACCA    GCAGGGCCTCCTTCCC ATCC GGGCAGGAGGCCCTGC     TCATGTGGGGCCATC 100 66
 CHQ57_18045 NONE
 CHQ57_18050 3916814 .. 3916842 +  -4.5  -3.30124   CCCCTGAGACGCGGC       GATCCCC-GCCG CAATAA CGACAGGGGGTC        TTATGACCAATCCAG  51 76
 CHQ57_18055 3917053 .. 3917073 +  -8.3  -2.59632   GAGTTGCGAAAAAAA            TCCCTGC CGATATA GCAGGGA            ATATCTATTTTTCAA  59 39
 CHQ57_18060 NONE
 CHQ57_18065 NONE
 CHQ57_18070 NONE
 CHQ57_18075 NONE
 CHQ57_18080 3920820 .. 3920839 +   -15  -5.76633   TGGGGGCGTAACAGG            GTGGGGGC GATG GCCCCCAC             TTTTTTTATATATAC 100 68
 CHQ57_18085 3922770 .. 3922797 + -16.4  -3.25802   GCTAGATAAGCAAAA        GGCGCAGC-GGTT ACT AACCTGCTGCGCC        TTGCTGAATTTGGTG 100 267
        tsaD 3928921 .. 3928949 + -21.9   -4.0371   CGGATCCGGTTGCAA        TGAAGAAGGGGCC CAT GGCCCCTTCTTCA        TTTCTATCAGCAGTA 100 46
 CHQ57_18195 3948227 .. 3948276 +  -2.2  -3.86346   GTTAATGAACAGAGT CGGCCCTGCTTT-T--TCTGACGCG GGG CGCGCCAGATGATAAAGTTGCGCCG TTTCTACAGGAGTCA  54 89
 CHQ57_18200 NONE
 CHQ57_18205 3949712 .. 3949729 + -12.7  -4.40237   GCCAGAAATGATAAA             GGGACGC CGCG GCGTCCC              TTTTCATCTCTCATC 100 43
 CHQ57_18260 3960391 .. 3960412 + -12.3  -3.83026   TAGCAATCACCCAAA           TGACCTCGC CCCG GCGGGGTCA            TTTGCTATGAGGGAG  91 128
 CHQ57_18275 3962600 .. 3962611 +  -2.2  -4.08767   AGCTGATGCCAAGCT                G-GGC CCG GCCGC                TTTTGAGCAGCTCGG  57 484
 CHQ57_18285 3963890 .. 3963908 +  -2.3  -4.59773   TGACGGGTTGCTCCA             GGGTAGC CAGCA GCTCCTC             TTTTTCCAGCTCGGC  68 312
 CHQ57_18295 NONE
 CHQ57_18300 NONE
 CHQ57_18305 NONE
 CHQ57_18310 3967323 .. 3967335 +  -6.2  -2.73364   AACGCCTCCCCACCC                GCCC CCTTC GGGC                TGCTTGCGCTCGCCC  51 39
 CHQ57_18345 3975043 .. 3975059 +    -3  -3.50877   CAACACTCATCAAAC              CAGTTG ATAAC CAATTG              ATTTTTATCGACTGC  49 44
 CHQ57_18350 3975803 .. 3975819 + -11.5  -3.74251   TGAATCAGAGAGAAG              GGGCGCT GAC GGCGCCC              TTTCATAAGGGTCTA  88 38
 CHQ57_18355 NONE
 CHQ57_18360 NONE
 CHQ57_18365 NONE
 CHQ57_18370 NONE
 CHQ57_18375 3979374 .. 3979393 + -13.6  -5.26316   ACGCCAGCCACGAGA            TGGCCTCC TTTC GGAGGCCA             TTTTTTGTCCCGTAA 100 102
 CHQ57_18380 3980377 .. 3980399 + -20.6  -2.78463   GACTGTCTGAATCCA           GGGGAGCCCG TGG CGGGCTCCCC           TGTCGTGACACGCCT 100 31
 CHQ57_18385 3982311 .. 3982334 + -16.8  -4.72272   CAAGAGCGAAAAAAA          CCTATGGGCC CACA GGCCCATAGG           TTTTTAATGCCCGCC 100 55
 CHQ57_18390 3983619 .. 3983667 +    -9  -2.71177   AGGGACAGCCAACGG TAACCGTTCACCGGGAG-GATGTT GAC AACAACTCTTCCGG-GAGCGGGTA GTCTGTTTTCTCTAT  63 54
 CHQ57_18400 NONE
 CHQ57_18405 3985980 .. 3986001 + -10.1   -3.9777   TTTGCAGGATATAAA           CAAAGGGGC AAAC GCCCCCTTG            TTTATCAATATTCGG  81 131
 CHQ57_18435 NONE
 CHQ57_18440 3993888 .. 3993903 + -10.4   -4.7373   TCACCACACCAAAAA              GGGCTC CACG GAGCCC               TTTTTCATGAAGTGA 100 63
 CHQ57_18450 NONE
 CHQ57_18455 NONE
 CHQ57_18460 3997727 .. 3997752 + -16.3  -2.70932   CCCTGAGATTTGAAA         CAAAAAGCCCC TTTT GGGGCTTTTTG          TCATTCCGGGCCGGG 100 47
 CHQ57_18465 3998275 .. 3998320 + -17.6    -3.484   CTGAAGCCCTTGCCT TGT-TCAGGGCCGCCCGGCGC AAAAA GCGCTCGGCGGCCCTGCTACA TTGTGCTGTAGTAGC 100 37
 CHQ57_18470 3998975 .. 3999000 + -16.9  -3.82604   GGGCTAATCCCGTCC         CGGGGCCGGTCA GAT TG-CCGGCCCCG         TTCTTGATTAGATGG 100 34
 CHQ57_18480 4002522 .. 4002546 +  -4.9  -2.92463   GGTTGACGAGTATTT          TGAGGCAGCTG TTG CACCGGTCTCA          TCTCTACCTGATAAA  47 443
 CHQ57_18485 4003237 .. 4003290 +  -3.2  -2.77167   TAATTGCCCTAACAA ACGC--CTCAAGAGGGACTGTCAACGC GTG GCGTTTCCAGTCCCA-TTGAGCTGCGG TGGTTACGGTTGTTG  41 38
 CHQ57_18490 4003862 .. 4003882 + -10.4  -3.27525   GGACTCGCAACAAGT            TGCTCGCC GTTTA GGCGAGCG            TTAGATTTCACGGAG  72 81
 CHQ57_18495 4004581 .. 4004595 +  -2.1  -3.67611   AACCTCTGGCATTTT              GC-TCG GTGC CGATGC               TTGTGTTCAGCTCAC  49 39
 CHQ57_18500 4005172 .. 4005183 +  -7.2  -3.05384   AGCCAGACTAAGCCC                GGGC AAGC GCCC                 TTCGATGGCAAGCCA  56 30
 CHQ57_18505 4005905 .. 4005933 + -16.1  -3.63515   TAAGTCGCCGCACAT        GAAAAAGCCCCGC ATC GCGGGGCTTTTTG        TTATTGGCGGTGGCC 100 24
 CHQ57_18555 NONE
 CHQ57_18560 NONE
 CHQ57_18565 NONE
 CHQ57_18570 4020814 .. 4020825 +  -4.4  -4.25104   GCAAGGGAGCGCCAA                GGAT GCAG ATCC                 TTTTGATCGCAGACG  64 136
 CHQ57_18575 NONE
 CHQ57_18585 NONE
 CHQ57_18600 4028114 .. 4028148 + -11.4  -2.89602   GAATGCGAAAAGAAA     AGGCCATCCGGGCT ATTTCCC GGCCTGGATGGCCC     CTTTCCTCTGGCCAC  75 110
 CHQ57_18615 4031198 .. 4031225 + -12.1  -3.17075   GAATGCCAGAAACAA        CAAAGCAGGCG CCGGGA TGCCTGCTTTG         TTGCCTTCGGGGAGG  81 46
 CHQ57_18620 4032039 .. 4032064 + -19.1  -4.35339   GAGACCCCTGACGAA         GAGAGGAGGCC CCGG GGCCTCCTCTC          TTTATTGATTGCTAT 100 102
 CHQ57_18640 NONE
 CHQ57_18645 4034914 .. 4034941 + -10.6  -5.31275   AAGCAACTTGCATGA        CGGGCCCAACC GACCTAA GGT-GGGCCCG        TTTTTTATGGTGCAA 100 67
 CHQ57_18650 4035626 .. 4035637 +  -4.4  -3.96148   GACCATTGCCTGCCA                TCAG CCCC CTGA                 TTTGTCATAAAAAAG  60 39
 CHQ57_18655 4036886 .. 4036909 + -14.6   -3.7732   CGATTTGAGTAAACT          GGAAGGCCCC GTCA GGGGCCTTTC           TTATTCATATGACGG 100 46
 CHQ57_18660 4037508 .. 4037520 +  -4.8  -2.97188   GTCACTGAACCCCCT                GGTC TAATT GACC                TCTGTCGTACTGTGA  47 150
 CHQ57_18665 4040525 .. 4040542 + -14.1  -4.54727   CCGGAGCAATGAAAA             GGGGCGC TTCA GCGCCCC              TTTTACTTTCCGGAA 100 53
 CHQ57_18700 4046231 .. 4046241 +  -8.2  -2.62263   CAGGGTCTTGTTGAT                 GCGC TCG GCGC                 TCATCTCCAGCACCT  52 420
 CHQ57_18735 4056104 .. 4056133 +  -5.7  -2.65112   AGATACTGTTCGGCT       TCTGGTTCACCAT CATA ATGATGAGCCAGC        TGCTGTGGGTCGCTT  47 65
 CHQ57_18740 4057419 .. 4057433 +  -4.2  -3.09516   AACAGCTGCTTACCC               CCGCAA GCG TTGCAG               TTGGGTGATGGCAGC  46 94
 CHQ57_18795 4067122 .. 4067139 + -14.1  -3.53125   TGCCAGACAACAAAA             CGGGCGC CGAA GCGCCCG              TTGCTATTTCTATCT  95 51
 CHQ57_18805 4069091 .. 4069101 +  -2.4  -2.87344   GCCAGGGCAAGGCAG                 CCGC TCT GCAG                 TGTGTGGCGGGCATC  40 397
 CHQ57_18815 4071135 .. 4071167 +  -6.3  -3.31144   CGACCGTGGGGATAT     GGCGAGGGATAGAGG CCAGT CCCCT-TCCC-CGCC     TTCTGCCCATACCCC  56 95
 CHQ57_18820 4072537 .. 4072550 +  -5.9  -5.88565   GCCGCCAACAAACAA               CGTCC GAAT GGGCG                TTTTTTTATTATCCA 100 52
 CHQ57_18835 4076981 .. 4076994 +  -2.3  -3.38007   CCCGAAAGTTGGACA               CCCAA CGAG TAGGG                GTTTTCGTTTATATG  45 154
 CHQ57_18840 4078647 .. 4078663 +  -2.1  -3.14344   TGGCGAGGTTGCCGT              TGGCGAC CCA GATGCCG              TTGCTCCAGGCGATA  43 311
 CHQ57_18855 4082701 .. 4082715 +  -8.5  -3.40403   GTGAGGCAACTCGAT               GCGCC ATCTG GGCGC               TTGTGATAAGGCCCG  65 154
 CHQ57_18875 4085874 .. 4085886 +  -6.9  -4.11216   CGCACCCAGCGCCCC                CGCGC CCA GTGCG                TTTTCCGCCTCCAGC  68 401
 CHQ57_18885 4086900 .. 4086937 +  -9.7  -2.75252   CGAACAGGAGTAAAA   ACACGAGTAAGGGGCGC CTGG GCGCCCCATACTCGACC    TGCTGTTCCCCTGAT  67 28
 CHQ57_18895 4089454 .. 4089474 +   -14  -3.04248   AGCACTGATCATGCG            GGGGCCAG CCTGA CTGGCCCC            TATTCAGGGCTGTTC  87 33
 CHQ57_18900 4089873 .. 4089894 + -15.9  -5.04601   CAGCCGAATGAAAAA           GCCCCGAAC CTGA GTTCGGGGC            TTTTTCATTTATCGA 100 43
 CHQ57_18930 NONE
 CHQ57_18935 NONE
 CHQ57_18940 4095958 .. 4095977 +   -15  -5.24129   AAGCACTTTTTATCA            GCCGACGC CTAT GCGTCGGC             TTTTTTCTGCGCGCG 100 102
 CHQ57_18950 NONE
        brnQ 4099653 .. 4099678 + -13.3  -3.89814   TTGTTCCGATATAAA         AAGAGGCCAGC ATAT GCTGGCCTCTC          TCTTTTCTCTGATCC 100 48
 CHQ57_18975 NONE
 CHQ57_18980 4102155 .. 4102189 + -18.8  -2.87564   CCCTGCCAACCAATG     AAAAAGCGGGTAACAC CAG GTGTTACCCGCTTTTC     TCTATGGGGCCATCG 100 53
 CHQ57_18995 NONE
 CHQ57_19000 4104338 .. 4104369 + -16.1  -4.26202   CCAGTCCAGAACAAA      TAAAAAGGAGCGC CGGTTT GCGCTCCTTTTTA       TTTATTGCTGAATCT 100 44
 CHQ57_19010 4108276 .. 4108296 + -16.9  -5.22006   CCCGCCTGAACGAAA            CAGGGCGCA ACA TGCGCCCTG            TTTTTATTGTCATGC 100 42
 CHQ57_19025 4111045 .. 4111064 +   -15  -4.22652   TCGGCTCATAAAAAA            CGGCGACC CGAG GGTCGCCG             TTTTGCATGATGTGA 100 56
 CHQ57_19065 4119297 .. 4119314 + -11.3  -4.82901   ACGGTCATAAAAAAA             CGACTCC ATTT GGAGTCG              TTTTTATCAGAGCCA 100 369
 CHQ57_19095 4123729 .. 4123759 + -24.2  -3.88498   GCAGGGTATGAATAA       CAAGAAGGGCACCC AGT GGGTGCCCTTCTTG       TTTGGTCTATGCAGG 100 49
 CHQ57_19110 4127722 .. 4127747 + -16.3  -4.08689   AGTTGCCCAGTACCA         CAAGGAAGAGG CCCG CCTCTTCCTTG          TTTCATTCTTGAATC 100 80
 CHQ57_19115 NONE
 CHQ57_19120 4131249 .. 4131268 + -10.7  -5.05113   TGCTGTCCTGACAAA            GCCCCCT TTTCAC AGGGGGC             TTTTGTTTATCTGCC 100 47
 CHQ57_19125 NONE
 CHQ57_19130 4133401 .. 4133420 + -12.2  -5.40474   TGAGTCAAACGAACA            GAGCCATC GCAA GATGGCTC             TTTTTTTACCAAAAT 100 38
 CHQ57_19135 4134378 .. 4134393 +    -9   -5.4505   CAGGTGTGAGAAAAA              GGATGC TGCG GCATCC               TTTTTTATTGGCCGC 100 50
 CHQ57_19200 NONE
 CHQ57_19205 4145306 .. 4145323 + -11.3    -5.252   GGCAACTCATGATGA             GGGGAAC TGCG GTTCCCC              TTTTTTATGGCGCTA 100 51
 CHQ57_19210 4146248 .. 4146258 +  -6.8  -3.62522   GCCGCAGCGCCGCCC                 GCCA GGA TGGC                 TTGTTGAGGGCATTG  60 293
 CHQ57_19230 4149327 .. 4149338 +  -2.2  -3.01712   GTCGTCCTGATGGCG                GTGT GAAC GCAC                 TCTTCACCGAGCAGA  42 31
 CHQ57_19235 NONE
 CHQ57_19245 NONE
 CHQ57_19250 4152379 .. 4152391 +  -4.7  -2.56271   GGTGCTGCTCGCCCC                CCTGC TCG GCCGG                ATGTTCTGGTAGCAC  45 1
 CHQ57_19255 NONE
 CHQ57_19260 4154340 .. 4154366 + -13.7  -4.44046   CGGGCGAGCCATAGC         AAGAGGGCGCC AACCG GGCGCCCTCTG         TTTATTTGCGGTGAC 100 27
 CHQ57_19275 NONE
 CHQ57_19280 NONE
 CHQ57_19285 4159910 .. 4159941 +   -13  -4.63218   CTTGGCCCCATGAAA      AAAGAGAGGCGACC CCGG GGTCGCCTCTCTCA       TTTTGTTGCCGCAGC 100 45
 CHQ57_19305 4163962 .. 4163987 + -17.7  -2.81547   CGGGGACGCACAATG         GAAAGGGCTGC CCGG GCAGCCCTTTC          TCGTTGATGTCGGGA 100 61
 CHQ57_19315 4166267 .. 4166288 + -14.5   -4.3129   AACCCCATAACGACA           TAACCCCGC CGAA GCGGGGTTA            TTTTCATCATGCGTC 100 31
 CHQ57_19380 4178838 .. 4178848 +  -6.8  -2.52946   AAGCAATACTGACTC                 GCCA ACG TGGC                 CCTTTTATGACGACA  52 29
 CHQ57_19385 4179833 .. 4179849 + -10.8  -3.76952   GTTACACTAATTGAA              GGCGGG CAAAA CCCGCC              TTTAACTTAAATAAC  84 31
        pckA 4181633 .. 4181657 + -18.7  -5.40474   TCTTGCAAACTCCAA          TACCGGTCAGC CCT GCTGACCGGTA          TTTTTTTAACCAGAT 100 56
 CHQ57_19395 NONE
 CHQ57_19400 4184288 .. 4184305 + -12.7  -5.47218   CCTCATCTGATGACA             CAGGGCC TGCG GGCCCTG              TTTTTTTGCCTCCCG 100 31
 CHQ57_19405 NONE
 CHQ57_19410 NONE
 CHQ57_19415 4186025 .. 4186060 + -17.8  -3.54741   CTAGCATTTCTCCAC    T-CAGAACCCCCGATGT ACT GCATCGGGGGTTCTGTA    TTTCAACGCATGATG 100 92
 CHQ57_19440 NONE
 CHQ57_19445 4192926 .. 4192940 +  -2.8  -3.54424   AACCCGGTTGACGGG               GCCA TTCACCT TGGC               TTTGAGGGGGTAAAA  49 30
 CHQ57_19450 4195087 .. 4195104 + -12.7  -5.25803   CAGCTCGATGCAAAA             GCCCGCA ACCC TGCGGGC              TTTTTTATACCCCTT 100 53
 CHQ57_19455 NONE
 CHQ57_19460 4197112 .. 4197123 +  -7.2  -3.06302   GGAGGGGGTAATGCG                CCGC TTGT GCGG                 TTGAATACCAATCGT  56 10
 CHQ57_19465 NONE
 CHQ57_19470 4200772 .. 4200784 +  -3.3  -2.88544   TATGATAAAAACCGG                GAGAG AGG CACTC                TCTCTCCCAGTCAGC  42 109
 CHQ57_19475 4201378 .. 4201388 +  -2.4  -3.53091   CCCCCCACTCCTCTG                 CGGC CAC GCCC                 TTTCCGGCCCACCAT  47 66
 CHQ57_19480 NONE
 CHQ57_19485 NONE
 CHQ57_19490 4204216 .. 4204231 + -10.4  -4.93968   ACATGATCAAAAAAA              GGCTCC TCGT GGAGCC               TTTTTCATTCTGGCT 100 48
 CHQ57_19505 4206322 .. 4206342 + -14.7  -3.16492   TGAGCTGATCCCGCC            TCCCCGGCT TGC GGCCGGGGA            TATTCATGCCTATCC  95 33
 CHQ57_19510 4206714 .. 4206732 + -13.1  -3.35224   AGTAGCGCAACCATG             GGCCGGC CCGTC GCCGGCC             TCTTTGACGGAGTCT  89 36
 CHQ57_19515 4207313 .. 4207335 + -12.7  -5.15634   CCGCGCAGTTAATGA          CC-GGGCCGG CCCA CCGGCCCCGG           TTTTTTGCTGCAATG 100 29
 CHQ57_19520 NONE
 CHQ57_19525 4209446 .. 4209467 + -13.7  -5.24531   ATCTTGACCACGACT           CGGGCGCCT TTGC AGGCGCCTG            TTTTTTATCGCACAT 100 74
 CHQ57_19530 4210092 .. 4210105 +  -2.3  -3.53224   TCAATCTTAGCTAAG               CAGAC CTAA GCCTG                TTTCGCGGCCAGCTG  47 315
 CHQ57_19540 4212234 .. 4212264 + -15.5   -3.7829   TGACAAAGCCATATG       CAAACAGGGCTCC TTCTT GGAGCCCTGCTTG       TTTCATCCCTGTCCT 100 64
 CHQ57_19555 4215054 .. 4215075 +  -6.5  -4.46212   ACAAGATCGCCAATG           TGCTCTCCC TGCT GGGATAGCG            TTTTCTCATCGACCC  74 6
 CHQ57_19560 NONE
 CHQ57_19565 4217601 .. 4217615 +    -7  -3.28712   ACACCCTTTACCCGA               GCCGGC GTC GCGGGC               TTATCACCAACAAGA  59 50
 CHQ57_19570 NONE
        menC NONE
 CHQ57_19580 4221296 .. 4221306 +  -2.4  -4.71482   GCGTATGGCAACTGC                 CCCG CAG CGAG                 TTTTTCACATTTCCT  68 363
 CHQ57_19590 NONE
 CHQ57_19595 4224630 .. 4224650 +  -3.1  -3.97209   GACAATGAAATTGGC            CACGGCGGT ATA ATCGCCAGG            TTTGATATTCCTTGC  56 54
 CHQ57_19630 4232006 .. 4232024 + -13.2  -3.34895   TTACCTCTAGTTTCC             TCCTGAGC CTG GCTCAGGA             TTGCTTGAAGATCAG  89 31
 CHQ57_19635 4235274 .. 4235299 + -19.1  -4.99035   GTGAGGCGTTAGCGA         CAGAGGGCAGC CACG GCTGCCCTCTG          TTTTTATATGAGTAC 100 43
 CHQ57_19640 4236429 .. 4236452 + -13.9  -4.87665   CTGACCAGACAAAAA          GAGACCCGC CGGATA GCGGGTCTC           TTTTTGTGAATGGAA 100 37
 CHQ57_19655 NONE
 CHQ57_19660 NONE
 CHQ57_19665 4240778 .. 4240804 + -20.2  -3.21099   AAACAGCCATAAACA         GCAAGGGGGCCG CGA TGGCCCCCTTGC         TTCATGCTGCAACCG 100 29
 CHQ57_19690 4246581 .. 4246600 +  -4.2  -2.56596   GACAAGGAGTATCGT            CGCCGC-CT CTG AGTGCAGCG            TCAGTTGCTCAAGAG  43 14
 CHQ57_19695 4248038 .. 4248057 + -13.6  -3.61988   TGAGTCAATCAACGA            GAGAGCGG GCGC CCGCTCTC             TTGATTTCTCCATGC 100 38
 CHQ57_19700 4248791 .. 4248819 + -16.1  -4.15565   CCTCACCCCGGAATG        CAAAACGCCCCGA CAA TCGGGGCGTTTTC        TTTTCAGCTCGTCAG 100 57
 CHQ57_19730 4255508 .. 4255521 +  -2.3  -3.38007   CCCGAAAGTTGGACA               CCCAA CGAG TAGGG                GTTTTCGTTTATATG  45 80
 CHQ57_19735 4256914 .. 4256924 +  -2.4  -5.26316   AAATGGGGTTCACTT                 CAGC AAG GCGG                 TTTTTTATGGCCTGC  79 51
 CHQ57_19740 4257550 .. 4257567 + -11.3   -4.7497   GTCGACCATGAAAAA             GGTGAGC CCGG GCTCACC              TTTTTCGTCACTACC 100 63
 CHQ57_19750 NONE
 CHQ57_19755 4260735 .. 4260755 + -18.3   -5.4251   AAGCGGCAGCAAAAA            GCCCGGGTC AGT GACCCGGGC            TTTTTTATATCTGGC 100 44
 CHQ57_19765 NONE
 CHQ57_19770 4264693 .. 4264712 +  -4.9   -4.7497   GATGTCAATTTCAAG            AGGGAGC CCGAGA GCTCCCC             TTTTTAATCAATAAC  75 81
 CHQ57_19775 NONE
 CHQ57_19780 4266140 .. 4266156 + -15.1  -3.36991   CAGCCAATGAATGAC              GGGCGGC TTC GCCGCCC              TGTTTGAGGATCCTA 100 84
 CHQ57_19785 4267286 .. 4267307 + -17.3  -4.70659   GCGGCCAAAACAGAA           GGGCGCCTC TTTG GAGGCGCCC            TTTTTACATATGACC 100 40
 CHQ57_19795 4268971 .. 4268999 + -14.6  -4.81083   CTCGCCCACTGATGA        CAAGGGGCCGAC ACATG GTCGGCCCCTTC        TTTTTGCTCCTTCAA 100 29
 CHQ57_19805 4271064 .. 4271083 +   -15  -4.42238   CGCCACGATAAAAAA            CGGGAGGC TTCG GCCTCCCG             TTTTCATTCACGTCA 100 63
         hfq 4275172 .. 4275217 +    -5  -2.90194   CGTCAAAGGGTGACC GAGTCCATTCTCAT-TG ATTATGTCTGTCC CGTATGAGAATGGACTC TATGCTTGGCCCGCT  47 75
 CHQ57_19850 4281015 .. 4281030 + -10.4  -5.44119   TGCCACACCGCAAAC              CACCCC TTTA GGGGTG               TTTTTTTGCAGTAAC 100 102
        glgC NONE
 CHQ57_19860 4283744 .. 4283770 +  -3.6  -4.43189   TATCAGGATGCACTG         GCCCGGCAGTGA TGC TCATTGCTGAAC         TTTTGTGCCCTTGAT  65 14
 CHQ57_19865 NONE
 CHQ57_19870 NONE
 CHQ57_19875 4284254 .. 4284268 +  -4.2  -3.53224   GTAAAAACAGAGCAA               TGCGTT CCA ACCGCA               TTTAAAAACCAGCTG  51 53
 CHQ57_19880 4284393 .. 4284426 + -19.1  -4.83593   GCACCATTCCTTATA     TAAAAGGCCCATCAC GAAA GTGATGGGCCTTTTG      TTTTTACTCCTTGTT 100 35
 CHQ57_19885 4284994 .. 4285008 +  -5.8  -4.51238   TCCCCTTGCATCACT               TGATAA CGA TTATCA               TTTGTATTTTATGAG  74 254
        nhaC 4286694 .. 4286723 + -20.9  -2.89323   GATCCACACAGCAAA       CAACAAAGGCGCC TCAA GGCGCCTTTGTTG        TGTCTGGACAGTTTT 100 39
 CHQ57_19905 4289197 .. 4289221 + -22.9  -2.87344   CGATGCACAAAAGCA          GAGGGCCCCGC CAT GCGGGGCCCTC          TCTCTGAACGCAGTG 100 145
 CHQ57_19935 4296005 .. 4296016 +  -2.2  -3.74519   ACTATCTGGGCTTGA                TGGG GTAA TCCA                 TTTGGTCAGGCTCTT  51 18
 CHQ57_19945 NONE
 CHQ57_19950 NONE
 CHQ57_19955 NONE
 CHQ57_19960 NONE
 CHQ57_19965 4302009 .. 4302024 +    -6  -2.78816   GGGCAATATGATTCC              CCCGGC ACAA GGCGGG               TATCGTCCACAGTGC  51 30
 CHQ57_19970 4303402 .. 4303433 + -15.2  -3.28712   GGACGGGGTCAGAGA      TGGCAGAGGGTGGC GATG GCCACCCTTTTCCA       TTCTGCCCAACAGGC 100 42
 CHQ57_19975 4304492 .. 4304506 +  -7.1  -3.61178   CTAGGGCTTGACCTT               GCTGC GGGCG GCAGC               TTTAGGCTGGCTGCA  63 37
 CHQ57_19980 4304825 .. 4304839 +  -2.1  -2.70788   CCCCCTCAACAGAAA              GC-GCA AACT TGCTGC               AATTTTTATCACTCA  39 113
 CHQ57_19985 4305971 .. 4305991 + -15.5   -3.9712   ACCATGAAAATAAAA            GGGCAGGAT GGA ATCCTGCCC            TTTCTCATGGCGTCA 100 69
 CHQ57_19995 4308028 .. 4308048 + -16.9  -3.93985   ATCTTTCAAATAAAA            GAGCCGGAC TGT GTCCGGCTC            TTTGCTATCTGTTAT 100 50
 CHQ57_20020 NONE
 CHQ57_20025 4314704 .. 4314717 +  -5.2  -3.26471   CATTGAGCGCTTCCA               GCCG TTTTTC CGGC                TTGATCTCCCCCTGA  48 452
 CHQ57_20035 4316233 .. 4316248 + -11.8  -4.03167   GACACTCAAGCAAAC              GGGCGC CTCG GCGCCC               TTGTTGTTGATGTTG  91 53
 CHQ57_20040 4317292 .. 4317309 +  -6.9  -4.84311   AACGAGCAATGCAAA             GAGGCCC CGAA GAGCCTC              TTTTGTTATCTGAAC  85 85
        folB 4321172 .. 4321184 +  -3.4  -2.87132   CTGCGAGCGCCTGCT                GATG ACCAC CATC                TATATCAGCCCGGGC  42 24
        folK 4321741 .. 4321764 + -16.8   -3.1855   GCATCACTGAATCAA          CAAGGGCACC CTAG GGTGCCCTTG           TTGCATCTTGCAAGG 100 31
 CHQ57_20090 4322676 .. 4322696 +  -6.7  -2.61264   CATCAGCCAGCCCAG            CAGCACCCC ATA GGGAAGCTG            GTTATCGATGAGGGC  49 353
 CHQ57_20125 4335852 .. 4335869 + -12.7  -5.25803   AGTCACACCTAAAAA             GGAGCGC CATA GCGCTCC              TTTTTTATGCGACTT 100 52
 CHQ57_20130 4337654 .. 4337677 + -18.2  -2.62184   CTTCTTCCCCTCACA          CGAGGAGCGC CGCG GCGCTCCTCG           TCATATCAGCGGCAA 100 44
 CHQ57_20135 4337942 .. 4337958 + -13.7  -5.06451   GGTCAGGCCAAAAAA              GGGCGCT GCT AGCGCCC              TTTTTTACAATCGTA 100 14
 CHQ57_20170 NONE
 CHQ57_20175 4348507 .. 4348531 + -12.9  -3.86897   AAGATGAAGGACTTG          CAAAAGGCGCC ACG GGCGCCTTTTC          TTTATGCAGGATCCC 100 99
 CHQ57_20180 NONE
        pilB 4350948 .. 4350960 +  -6.9  -2.73542   GACTGATCCAGGTGA                TGCCG AAC CGGCG                TCCTTGACGATTCCC  53 62
 CHQ57_20190 NONE
 CHQ57_20195 NONE
 CHQ57_20200 NONE
 CHQ57_20205 NONE
 CHQ57_20210 4354833 .. 4354847 +  -8.5  -5.31059   GCCGCACACAAAAAA               GGGCC GACAA GGCCC               TTTTTTAATTGCTGT 100 41
 CHQ57_20315 NONE
 CHQ57_20320 NONE
 CHQ57_20325 NONE
 CHQ57_20330 4381423 .. 4381440 + -12.7  -5.99154   ACAGAAATAAAAAAA             CGCAGCC AGTT GGCTGCG              TTTTTTTATTTGATG 100 56
 CHQ57_20375 4388132 .. 4388167 +   -12  -3.27475   TCCGGTCTGCTCAAG    CAGTCCAGTTAGTTCC CCGC GGAACTAATTGCGCTG     TGTTGTGGTCAGACC  80 14
 CHQ57_20380 4389594 .. 4389619 + -16.1  -4.83169   TCCGTTAATAACCTC         ACACCCGCGGC CCTC GCCGCGGGTGA          TTTTTATCCACCGAT 100 33
        degS 4390831 .. 4390846 + -11.8  -4.17701   CTCTTCATATCACAA              GGGCGG GTAA CCGCCC               TTTGTCATTTCTGCA  93 50
 CHQ57_20395 NONE
 CHQ57_20400 NONE
 CHQ57_20405 4392140 .. 4392154 +  -4.2  -2.62184   GCCTGGACGCCGACA               AGGTGA CGT TCACCC               TGGTGTAACACCACC  43 3
 CHQ57_20410 NONE
 CHQ57_20415 4393647 .. 4393666 + -10.6  -3.04792   CCTAGCATAAGCACT            CGCCGCCC TGCG GGGCGGCC             TCTTCGAGGTCATCA  72 31
 CHQ57_20420 NONE
 CHQ57_20425 NONE
 CHQ57_20430 4396780 .. 4396807 + -14.8  -2.67428   GGCGTGATGAAAGAT        GGCACCGGTCCG ATCA CTGGCCGGTGCC         TGGCTTGTTAATGAC  90 34
 CHQ57_20435 4398790 .. 4398804 +   -10  -2.70932   CCTGAACCCGGGCGG               GGAGTG AGT CACTCC               TCGTTGAAGCCGGAG  67 36
 CHQ57_20490 4406599 .. 4406614 +    -4  -2.93348   CATTTTCCGGCAGGC              GA-CCTG CTA CAGGATC              TGTGATGTTGATAAG  45 5
 CHQ57_20495 NONE
        mlaD NONE
 CHQ57_20505 NONE
 CHQ57_20510 NONE
 CHQ57_20515 NONE
        murA 4410368 .. 4410393 + -21.9  -4.82667   CATGTCTGTTAAAAA         GGCCCCCTCGC GTTG GCGAGGGGGCC          TTTTTCATATCATGG 100 56
 CHQ57_20530 4412457 .. 4412477 +   -14  -5.89921   CGACACAGCGTAAAA            CGGGGCCA ACATA TGGCCCCG            TTTTTTTATTCTGGT 100 73
 CHQ57_20575 4424143 .. 4424177 +  -4.1  -3.53012   AGGCCATCAACAGCG     CCAGCGACCAATCCG TCATC CGGGTCGGCTCCTGG     TTTGCCAGCAGCAAC  49 317
 CHQ57_20590 4426445 .. 4426474 +  -4.2  -4.25104   TGGGGATCGTGATGA       CAGCGCCAGC AGACCTCAAA GTTGGCGCCG        TTTTCCTCCCCGCAC  65 65
 CHQ57_20605 NONE
 CHQ57_20610 4430485 .. 4430500 + -10.4  -5.15167   AACAGACACAAAAAA              TGGGCC AACA GGCCCA               TTTTTCTTGCTGGTG 100 53
 CHQ57_20620 4431651 .. 4431693 + -12.1   -5.4505   AATAGTCTCCGATTG GGAAAATAAAAACGGCGCC TTGAT GGCGCCGTTTTTATTGGCA TTTTTTATTGGCGAA 100 144
 CHQ57_20650 NONE
 CHQ57_20655 4441695 .. 4441709 +  -2.8  -3.08438   CGACAACGACAAGGA               AGCAAT ATG ATTGCC               TATTACCCTCTGCTC  43 16
 CHQ57_20660 4442103 .. 4442128 +  -9.7  -2.80817   CGAGAATGTCCACCT         GGTGGGGGGAA GCCA TTCCCTCCACA          TCATCTTCTGCCCTT  67 41
 CHQ57_20665 4443374 .. 4443403 + -15.2  -3.80746   CGGGTTAGCTAATCC       CAAAAAGCCGAG CTCAGC CTCGGCTTTTTG        TATTCTTTTTAAGCA 100 29
 CHQ57_20675 4445144 .. 4445160 +  -2.3  -3.29325   GGCTTCTCTAGACAC              TTTTGAG CCG TTCGAAA              TATTGCTTCTCACAC  45 20
 CHQ57_20835 4475811 .. 4475842 + -14.4   -3.2794   GAGCACAGTACATGA      ACGAAGAGGGGGCC TGCA GGCCCCCTCTTCCA       TTGGTGTCCCTGGCA 100 49
 CHQ57_20850 NONE
 CHQ57_20855 4480009 .. 4480051 + -25.2  -3.30441   GGGCTAGTTCCAGGT GCAATATAGAAAAAGGGGCC AAG GGCCCCTTTTTCTATATGGC TTATCCAGCCTGGTA 100 34
 CHQ57_20865 NONE
 CHQ57_20870 4486075 .. 4486092 + -14.1  -5.85737   CTCGACCAACAAAAA             CGGCGCC ATCA GGCGCCG              TTTTTTTATTGCTGT 100 48
 CHQ57_20895 4489507 .. 4489523 +  -9.4   -4.3467   GACATCACCAAAAAA              GAGGCC GATTA GGCCTC              TTTTGCTATACGAGT  86 14
 CHQ57_20915 4492221 .. 4492256 +  -8.4  -3.86015   TTTGCCGCCTCTATG    CCGTGCCGATT-CAATA ACT TGTAGAAATCGGTACGG    TTTCTGCCCGCCATG  69 115
 CHQ57_20935 4496630 .. 4496648 + -10.2  -2.90075   GAACTGGGCCAACTG             CGCGGCAG CAT CTGCCGCC             TCTGGTTCGAAGGCC  68 383
 CHQ57_20945 4497486 .. 4497499 +  -3.7  -3.53012   CGATGTCGAAGTGCA               GGGGC ATCC GCCAC                TTTGCCAGACAGAGC  49 63
 CHQ57_20955 4499289 .. 4499303 +  -7.2  -4.10855   ATGGCCTGATCGAGA               TTATCG ATC CGATAA               TTTTCCGGCACTTTT  68 483
 CHQ57_20965 4500654 .. 4500673 + -12.2  -5.88565   TGACTACATTCCTCC            CGGCAATC TTAG GATTGCCG             TTTTTTTATTCTCCG 100 218
 CHQ57_20985 4506316 .. 4506344 + -21.1  -4.82863   GGTCAGCCTGACCCA        CAGCCCAGCAGGC TAC GCTTGCTGGGCTG        TTTCTTTTCTACTTC 100 100
 CHQ57_20990 4507715 .. 4507739 +  -2.7  -3.09327   AGAGTGCAACTGGCA          TGACAGCGC CGTGTAC GCGCCGCCA          TCTTCAGTCAGCTAC  43 344
 CHQ57_21035 NONE
 CHQ57_21040 4520122 .. 4520141 +   -15   -5.1356   TGCGGACATGCAAAA            GGGCAGCC CGCG GGCTGCCC             TTTTTATTGCTGGCC 100 43
 CHQ57_21085 NONE
 CHQ57_21090 4532024 .. 4532036 +  -3.4  -2.60392   AGGTATAGTCAGGGA                TTGC AGGGA GCAA                CTTCGTTCAAGGATA  40 518
        galE 4543296 .. 4543309 +  -3.1  -2.67981   TCTTCCAGGCCCCGT               TGGCGG CCA CC-CCA               TCCATTTCATCAGGT  40 65
 CHQ57_21130 NONE
 CHQ57_21135 NONE
        galM 4546782 .. 4546796 +  -2.1  -3.60475   TGACACCCCCTTTGA               CAAGG AAGCG CTTTG               TTTGCGCCCTTTCTT  49 98
 CHQ57_21145 NONE
 CHQ57_21150 4548992 .. 4549019 + -17.2  -3.13403   GGCAAATAGCCGAAT        GAAAAAGGGACC TTTC GGTCCCTTTTTC         TATTGCTGCCCCACC 100 46
 CHQ57_21170 NONE
 CHQ57_21175 NONE
 CHQ57_21180 NONE
 CHQ57_21185 NONE
        hslU 4556019 .. 4556041 + -17.8  -5.43414   GCACTGACTATTCTG           GACGCCTCCA CTA TGGAGGCGTC           TTTTTTGTGTCTCAT 100 56
 CHQ57_21200 4558612 .. 4558637 + -12.7  -4.00868   CGGATGCCACACAGT         GAAAGCACCTC TGCC GAGGTGTTTTC          TTTCATTATGCCTGG  95 70
 CHQ57_21205 NONE
        nirD NONE
 CHQ57_21215 4562593 .. 4562603 +  -2.4  -2.73735   CCGCCTGATCCGGAG                 GCCC CAT GGAC                 TACTTGCCCATCTTT  39 33
        cobA 4564031 .. 4564051 + -18.3  -5.26918   GCCAGTCCATTCAGA            CCGCCGCCA TCA TGGCGGCGG            TTTTTTATGACGTCT 100 52
        mgtE 4565604 .. 4565622 + -14.6   -3.7108   GTCTCAAACAACAAA             GGGAGCCA CTA TGGCTCCC             TTTGACTATCCCGCT 100 50
        rraA 4568149 .. 4568166 + -11.3  -5.28176   AAATCAGCATGACGA             TGGGAGC CTTG GCTCCCA              TTTTTTATGGCTGAA 100 45
 CHQ57_21255 4571630 .. 4571661 +  -5.8  -3.28712   ACTCCTCGAAGGATC      GCACCTCGACCTGGC CGA GCGGGGTC-AGATGC      TTGTGACGCCAGGCC  56 202
 CHQ57_21275 4574078 .. 4574094 + -13.7  -5.93809   TTATTTTTAAAAAAG              GCCCCTG TTT CAGGGGC              TTTTTTTTGTGCCCG 100 233
        pyrB NONE
 CHQ57_21285 4575556 .. 4575573 + -12.7  -4.59109   TTACTGATATCCAAG             TGGGCCC CAAT GGGCCCA              TTTTTGACCCCTGTC 100 34
 CHQ57_21290 NONE
 CHQ57_21295 4576837 .. 4576858 +  -4.3  -3.35679   TGCCTCAGTCAGCTG           CAGCACCAG ATTG CGGGTGATG            TTCTGGGTCAGCAGC  49 401
 CHQ57_21305 4578898 .. 4578914 +  -3.6  -3.08679   TACCGGTACCTATCT              GGTAGG CTGAC CCCACC              TATTGCATAAAAACC  46 16
 CHQ57_21310 4579656 .. 4579675 +   -15  -4.28548   TCAGACTCCACCCAT            GGGCCACC GAGC GGTGGCCC             TTTTAATGGCTGCGT 100 122
 CHQ57_21365 4589982 .. 4589998 +  -9.4  -3.28712   ATTCTTCTGTTAGAC              TCCGGG CAAGT CCCGGA              TTCTACAGGAGAGCA  69 40
 CHQ57_21370 4590880 .. 4590892 +  -3.3  -2.71924   CGCGGTAGCAGTGTT                CGAAC GGC GTGCG                CTTTGAGCGGCGCTG  41 33
 CHQ57_21375 4591497 .. 4591515 +  -6.6  -3.90318   GTTCCCATCATGCCA             TGGGGCTG AAT CGACCCCA             TTTATCCCGTGATGA  68 17
 CHQ57_21380 4592707 .. 4592723 + -10.1   -5.4505   AGACCCGACGTCATC              GGGTAGG CTA CCTGCCC              TTTTTTATTCAGGAG 100 160
 CHQ57_21385 4594263 .. 4594284 + -13.1  -4.11216   CCTCACGGAGACAGA           GGCGATAAG CGCT CTTATCGCC            TTTTCAGCATCGAAC 100 177
 CHQ57_21390 NONE
 CHQ57_21395 NONE
 CHQ57_21400 4597717 .. 4597735 + -11.7  -4.55697   AGCCGAACATGAAAG             CCGGAGC ACAAG GCTCCGG             TTTCTTTATGCAGCT 100 55
 CHQ57_21415 4600895 .. 4600912 + -12.7  -4.02535   CGACCGGCGTGACAA             CAGGGCC CTTG GGCCCTG              TTTGATTAGTTATCC  95 56
 CHQ57_21420 NONE
 CHQ57_21425 NONE
 CHQ57_21430 4603338 .. 4603358 + -18.3  -3.56273   TTCCCGTAACAAAAA            GGGGCCCCA TGA TGGGGCCCC            TTCTGTCGTGATCGG 100 54
 CHQ57_21450 4608979 .. 4608995 +  -7.3  -3.12895   TTGACCCCACCGAGC              TGAACTG AAC CAGTTCG              TATATTGCTCAAGCG  56 18
 CHQ57_21465 4611328 .. 4611356 + -17.5  -3.53722   CAGAACCACATAAAG        CAAAGAGGGAGGC AGC GCCTCCCTCCTTG        TTATCTCGCTATCCC 100 28
 CHQ57_21500 4621241 .. 4621254 +  -2.3  -2.52623   CAGTGCATGGTCTAG               CGGCT CATC GGCTG                ATATTATGGCCACAG  38 87
 CHQ57_21505 4622710 .. 4622726 +  -7.2  -2.70932   GCAGGGGGGCGCGGA              GTCGGC AGTCC GCCGGC              TACTTCGGGGCAGAA  50 518
 CHQ57_21520 NONE
        pncB 4625577 .. 4625596 + -11.4  -3.96148   ATGACCCTCTTGAAA            GGTCCGAC TGGT GTCGGGCC             TTTCTCGTGCCCGAA  90 92
 CHQ57_21530 NONE
 CHQ57_21535 4627234 .. 4627266 +  -4.8  -2.63715   GTGACCAGGAGGCAC     TGCCGTGCATCGGCT GATG AGCCGCTG-GCGCCA      TCCTCTGCCCTGGCT  45 9
 CHQ57_21540 4628843 .. 4628866 + -19.6  -4.68424   CCCGATAAACAAAAA          GCCCGCCGGT TTGC ACCGGCGGGC           TTTTTCCATGGGTTA 100 83
 CHQ57_21590 4639837 .. 4639859 + -17.8  -3.11182   GAGTGATGGATGCAA           GAAGCCCGTC AGC GACGGGCTTC           TACTTTGTGTTCGCA 100 35
 CHQ57_21625 4647464 .. 4647481 +  -2.7  -3.75153   CTGTTTCACAATTGT             TGAATGT CAGC ACAATCA              TTTGAATTCACCGCA  53 44
 CHQ57_21630 4648762 .. 4648775 +  -9.5  -5.31456   TCTGATTTGAACCAA               GGGGC TGCA GCCCC                TTTTTTCTGCATTCA 100 36
 CHQ57_21635 4649876 .. 4649891 + -10.4  -5.67063   CCCTCTTTCATGAAA              CCCGGT GAAT ACCGGG               TTTTTTTATCATGCA 100 53
 CHQ57_21640 4650502 .. 4650539 + -17.1  -3.91084   ACCGACAACCTCTAA   GTGATTGAAAGGGCCGC AATT GCGGCCCTTTCAATCTG    TTTACTTCCGACTAC 100 26
 CHQ57_21645 4652903 .. 4652929 + -10.8  -3.96624   CTTCTTGAACAGCGC         TCGCAGGTTGGC GAC GCCAACCTGCCC         TTTCTGCTGGCGCTC  86 57
 CHQ57_21655 NONE
 CHQ57_21660 4656743 .. 4656770 +  -7.8  -2.98947   ATCCGCCTTGTTCAG        TGGTCGATTACGC TTC GC-TAATCGACCC        TACTTCTTCATTCCC  59 40
 CHQ57_21720 4669684 .. 4669707 +   -14  -4.28254   AAGGTTCAAGATTAA          TAAAGGCGTC ATCA GACGCCTTTA           TTTTGACTGTTAACC 100 42
        fadB NONE
 CHQ57_21730 4673204 .. 4673251 + -15.1   -5.0538   TCGAACGGGTGTGAT GCCAA--C-GGCTCGCCCTCACTG CGA CAGTGAGGGCGAGCCAGAATTGTC TTTTTTGGGGTCGGC 100 27
 CHQ57_21735 NONE
 CHQ57_21740 4675795 .. 4675822 +  -6.8  -3.05935   GGGTGCTGCACGGGT        GGCGTGCGGTCG GCAC CGACCACTCTCC         TTCACTCAAGGCTGT  56 112
 CHQ57_21745 4677105 .. 4677136 + -21.8  -3.28924   CTCGACAGCCAGAAA      CGACAAAGGCGGAT GGTG ATCCGCCTTTGTCG       TTGTGGGAGAAACTA 100 48
 CHQ57_21765 NONE
 CHQ57_21770 4678334 .. 4678345 +  -3.6  -2.87132   CAAGGTGGAAATCCA                GCTG ACTG CGGC                 TGTCTAAGCCGAGCG  45 7
 CHQ57_21775 4678494 .. 4678517 + -19.6  -4.43477   CACCGGATAGCAAAA          GGCCCCGCCA TCAC TGGCGGGGCC           TTTTCGTTACCTAAA 100 49
        glyQ NONE
 CHQ57_21795 4683265 .. 4683282 + -12.7   -5.1861   TAAGTGATATAAAAA             CGGCACC AAGA GGTGCCG              TTTTTTAATCATAAA 100 52
 CHQ57_21800 4684433 .. 4684445 +  -9.1  -3.21416   CCAGTATCAGGCGAT                CCCTG TCC CAGGG                TTCATAGTCGCGGTC  67 313
 CHQ57_21815 4686485 .. 4686519 +  -2.8  -2.95207   ATGGCAGCAAATTCA    CCT-GTTGGCAGACCG TTTTC CGGGC-GCCATCCAGG    CTTGTTATCATTTGA  42 54
 CHQ57_21820 4687473 .. 4687489 + -12.3  -3.46178   ACCCGTCTGTGGGGA              TGCCGCT GCT AGCGGCA              TTGTCATCCATTTAT  86 137
 CHQ57_21825 4688046 .. 4688063 +  -8.3  -5.29445   TTTTTGTTATCAAAA             AGGCGCC AAAA GGCGCCG              TTTTTCTTGTTGCAG 100 74
 CHQ57_21870 4697375 .. 4697394 +   -15  -4.30576   GCCCATAAACAAAAA            CCCCCTCG GTGA CGAGGGGG             TTTTCGTGGTGCCGG 100 51
 CHQ57_21880 NONE
 CHQ57_21885 4701361 .. 4701380 + -10.7  -4.93365   GCCCATAAACAAAAA            CCCCCTC GGTAAA GAGGGGG             TTTTTCGTTGTGCCG 100 44
 CHQ57_21895 4703995 .. 4704014 + -13.6   -2.6563   AATAATCTGCCGGTC            GGGGTGAC GTGA GTCACCCC             TCCCTTCTTGCGGGC  84 36
 CHQ57_21900 NONE
        livM NONE
        livG NONE
        livF NONE
 CHQ57_21920 4708838 .. 4708861 +    -3  -3.05498   GCGCCGTATAAAAAA          GCG-GGTGGTG TGC CGCCTTCACGC          TCTATCTCTCCGCTG  41 281
 CHQ57_21930 NONE
        glpG 4710506 .. 4710525 + -16.4  -5.69473   TCGCAGAAACGAGAA            CGCCGCCC CTTG GGGCGGCG             TTTTTTTATGGTCTG 100 54
 CHQ57_21945 4713555 .. 4713579 + -18.7  -4.09117   GCACAGCATATAAAG          CAAACCCCAGC CTG GCTGGGGTTTG          TTGTTTCTGGCTCGC 100 62
 CHQ57_21975 NONE
 CHQ57_21980 NONE
 CHQ57_21985 4722154 .. 4722178 + -20.1  -5.14563   TCCGGTACGAAAAAA          GAGGGCCAACC TTG GGTTGGCCCTC          TTTTTTAATCAGCGG 100 42
 CHQ57_22115 4749668 .. 4749684 + -13.7  -5.37593   ATAACCAAACAAAAA              GAGCCGC AAT GCGGCTC              TTTTTTCATTTCAGA 100 56
 CHQ57_22130 4753289 .. 4753299 +  -2.4  -2.97653   GTGCTGATCTTCGCG                 CTGG CGG CCTG                 GTTTGTGCTGGAGAT  41 132
 CHQ57_22140 4755541 .. 4755557 + -15.1  -5.61596   GCTGTGATCCCAGAA              CCGGCGC AAG GCGCCGG              TTTTTTTATCACCCT 100 34
 CHQ57_22145 4757021 .. 4757040 + -16.4  -3.46236   CTGCCAGAAACAAAA            CCGGCGCC ATCA GGCGCCGG             TTGCATTTTATTGAT 100 46
 CHQ57_22225 4773299 .. 4773322 + -18.2  -4.57073   CTGGTAACAGAGGTC          GGGCGGGAGT TGTG ACTCCCGCCC           TTTTTCCCCCGCATA 100 34
 CHQ57_22230 NONE
 CHQ57_22235 4775941 .. 4775955 +  -4.2  -3.25877   GCCATCGCCATCATC               TAGCCG GGA CAGCTA               TCTTGATATCTTCAT  47 161
 CHQ57_22240 NONE
 CHQ57_22245 4778898 .. 4778920 + -15.6  -5.41143   AAATGCACAAAAAAA           GAGCCCGGGA TAA TCCCGGGTTC           TTTTTTTCAGGGCTG 100 54
 CHQ57_22290 4792034 .. 4792051 +  -6.3  -3.28924   GGTGAGCCCACCCCA             TGCTGAA ATAT TTCGGCA              TTCTGAACAAAGATC  52 204
 CHQ57_22305 4798303 .. 4798319 +  -2.9  -2.55253   TTTTACTTTTATTAA              TGGTTGT TTC ACCGCCA              TCCCTTACGATTAAT  40 83
 CHQ57_22310 4799626 .. 4799651 + -19.1  -3.96387   TGATGGACGTGGTTG         CAGGGCGAGAG CCAG CTCTCGCCCTG          TTTGCTTGCGTTACT 100 67
 CHQ57_22350 NONE
 CHQ57_22345 NONE
 CHQ57_22340 4803740 .. 4803754 - -12.8   -5.4505   TCCTCCAATAAAAAA               GGCGGC CAG GCCGCC               AAAGAGAGAGCTATT 100 36
 CHQ57_22335 NONE
 CHQ57_22330 NONE
 CHQ57_22325 NONE
 CHQ57_22320 4801095 .. 4801112 - -14.1  -5.46657   CATTGTAATAAAAAA             GGCGGCC CGAA GGCCGCC              TCTTTTGTCATCAAG 100 48
 CHQ57_22315 NONE
 CHQ57_22300 4793250 .. 4793275 -   -14   -3.5002   GGGAATGACAATGAA         CCCCGGGGAG TGCGCT CTCCCCGAGG          CTTGATAGGTCAGGA  95 35
        basC 4791857 .. 4791898 - -27.5  -3.96827   AAAAGGAGGCATAAA CAGTGTTCTGCCCCCTGTC AGCC GACAGGGGGCAGAACACAG  GGCTAGGCGGTTGGC 100 28
 CHQ57_22285 NONE
 CHQ57_22280 NONE
 CHQ57_22275 NONE
 CHQ57_22270 NONE
 CHQ57_22265 NONE
 CHQ57_22260 NONE
 CHQ57_22255 4781520 .. 4781540 -  -4.1  -3.62591   TTCACAACCCTCAAA            TAAAAATGA ATA TCATTTGTA            TCTTTGTGGCCCGGC  53 94
 CHQ57_22250 4778898 .. 4778920 - -13.4  -5.68039   AAATGCACAAAAAAA           GAGCCCGGGA TAA TCCCGGGTTC           TTTTTTTCAGGGCTG 100 74
 CHQ57_22220 4770078 .. 4770105 -  -8.5  -2.60813   CATCGTGTTAAAGAC        GATCCTAGCTT GTGGAA AAGCTTGGATC         CTGGGGCCGTGAACC  59 271
 CHQ57_22215 NONE
 CHQ57_22210 NONE
 CHQ57_22205 NONE
 CHQ57_22200 4765493 .. 4765529 -    -6  -4.98436   GCAATATGACAAAAA   CCCTTAATT-TTTGCGG CTTT CCGCACAGAATTAAGGT    TATGTTCATATCAAA  83 78
 CHQ57_22195 NONE
 CHQ57_22190 NONE
 CHQ57_22185 NONE
 CHQ57_22180 NONE
 CHQ57_22175 NONE
        atpA NONE
 CHQ57_22165 NONE
        atpD 4758930 .. 4758940 -  -5.4  -2.76671   ACATCCAGGTGAAAG                 GAGA TCA TCTC                 AGCCATGGGCCCTCC  48 50
        atpC 4758485 .. 4758500 - -10.4  -6.17184   ACGAGCAAAAAAAAA              GCGACC AGAA GGTCGC               TTTTTACATCACCGC 100 43
        glmU 4757021 .. 4757040 - -16.4  -4.99043   CTGCCAGAAACAAAA            CCGGCGCC ATCA GGCGCCGG             TTGCATTTTATTGAT 100 47
 CHQ57_22125 NONE
        glmS 4749662 .. 4749690 - -14.7  -4.04174   CGCCAGATAACCAAA        CAAAAAGAGCCGC AAT GCGGCTCTTTTTT        CATTTCAGACAACGG 100 42
 CHQ57_22110 NONE
 CHQ57_22105 NONE
 CHQ57_22100 NONE
 CHQ57_22095 NONE
 CHQ57_22090 NONE
 CHQ57_22085 4743585 .. 4743600 -  -4.6  -3.39772   TCAAATTGTTAAAGA              GCGTCA CGCT TGTCGC               GTTGAGGAGGCGCAT  51 258
 CHQ57_22080 4741711 .. 4741723 -  -3.3   -4.1721   ATTCACATCCCAAAA                CCCAA TGA TAGGG                CTTCTCTCATCTGAC  60 141
 CHQ57_22075 4741488 .. 4741515 - -12.2  -4.65747   CAAGGCCGAAGAAAA        CAGACATAAACA CGCA TGCTTATGTCTG         CATTCTTGTTAGCAA 100 50
 CHQ57_22070 NONE
         rrf 4738092 .. 4738104 -  -9.1  -2.62667   CTAACCGGTAAAGAC                CGCAC TGC GTGCG                TTATCTAAATCTCTC  62 101
 CHQ57_22060 4737968 .. 4737985 - -12.7  -5.13473   AGCAGATGCAAAAAA             GCCTCCC GATT GGGAGGC              TTTAATATTTACTGG 100 38
 CHQ57_22055 4736610 .. 4736625 -  -7.6  -4.85599   TGGATGCCAGAAAAA              TCTCAG TAAA CTGAGA               GACGCATGTCTAGTC  90 81
 CHQ57_22050 4735149 .. 4735161 -  -3.4  -4.09685   TCTTAGCGGCGAAAA                TCGA CCGGC TCGA                CCCGATCCAGATGGA  58 0
 CHQ57_22045 NONE
 CHQ57_22040 NONE
 CHQ57_22035 NONE
        ubiB 4731566 .. 4731586 -  -2.5  -3.54459   GCAATCTTTTCCAAA            CTGGCAC TTGAGGT GTGCAAG            CAGGCAATTAGTGTG  47 33
        tatA 4731229 .. 4731243 -  -2.1  -3.15236   GAAACCGATATCGAA              CATGGC TTAA GCC-TG               ATCTTTGTCTTTCTG  43 17
        tatB NONE
        tatC 4730020 .. 4730047 -   -12  -4.25283   ACGGGGGCATGAAAA        GAGGAAGGGAGC CTCA GCTCCCCTCTTC         CGTTTGTTCCTGTTG  93 11
 CHQ57_22010 4729139 .. 4729149 -  -3.2  -2.79098   TGTAGCCATGAATCA                 CTCC TGA AGAG                 GAAGTTGGAAGAACG  41 12
 CHQ57_22005 4728061 .. 4728091 - -16.3  -2.87132   TCTGGCTGTCAGAGA      CGACAATGCCGGCC CCTG GGCCGGCATTGT-G       AGGGAAATGAGACGG 100 47
 CHQ57_22000 4725745 .. 4725760 - -10.4  -4.39002   AAAGCCTTGAGAAAA              GGGACC AAAA GGTCCC               TTTTTATCTCAAAAA  90 112
 CHQ57_21995 4723000 .. 4723014 -  -2.7  -2.79796   GCGGAGTGTATCACA               GCCCC TTTAT GCGGC               TGTAGGGTGTGTCGT  41 106
 CHQ57_21990 4722154 .. 4722178 - -20.1  -5.14563   TCCGGTACGAAAAAA          GAGGGCCAACC TTG GGTTGGCCCTC          TTTTTTAATCAGCGG 100 54
 CHQ57_21970 4718584 .. 4718608 - -15.1  -4.02581   GGTGATAAAACACAA          GGAGCGCATTA TTG CAATGCGCTCC          TTTTTGATTATTACA 100 36
         rho 4717109 .. 4717126 - -10.5   -5.4433   ATAGATAAACAAAAA             CCGCGAC ATGA GCCGCGG              TTTTTCATTTTCCGA 100 46
 CHQ57_21960 NONE
 CHQ57_21955 NONE
 CHQ57_21950 4713554 .. 4713580 - -15.2  -4.11404   CGCACAGCATATAAA         GCAAACCCCAGC CTG GCTGGGGTTTGT         TGTTTCTGGCTCGCC 100 133
 CHQ57_21940 4710506 .. 4710525 - -16.4  -3.64915   TCGCAGAAACGAGAA            CGCCGCCC CTTG GGGCGGCG             TTTTTTTATGGTCTG 100 46
 CHQ57_21925 4708428 .. 4708443 -  -6.1  -3.18582   TACGCCAGGCACGAA              CCCTG CTCGCT CAGGG               ACGGCCCCTGGTCGA  50 143
 CHQ57_21890 4701361 .. 4701380 - -10.7  -5.38054   GCCCATAAACAAAAA            CCCCCTC GGTAAA GAGGGGG             TTTTTCGTTGTGCCG 100 68
 CHQ57_21875 4697369 .. 4697400 - -19.6  -3.86015   CACCCCGCCCATAAA      CAAAAACCCCCTCG GTGA CGAGGGGGTTTTCG       TGGTGCCGGTGCGAT 100 64
 CHQ57_21865 NONE
 CHQ57_21860 4692959 .. 4692974 - -11.8  -2.71263   AATTCTCCTCAAGTA              GCCGGG TCAA CCCGGC               CTGACGTTATCAATG  73 43
 CHQ57_21855 4692522 .. 4692543 -  -3.8  -3.49475   CTCAGGGGCACAGAA           TAACCAAC ATCTGA GTTGATTA            TTTTGATCTGCATGG  51 81
 CHQ57_21850 4691240 .. 4691285 -  -7.6  -3.06696   CGGCCCCTCAACAGA CCGCCTGCAACTGGCGCATCG GTACT CAATGAGCCAGTTGG-GGCAA CAGCTGTAGCAGCTG  59 5
 CHQ57_21845 4689685 .. 4689702 - -14.1  -4.34402   GGCCTTATACCAAAA             CGGCGCC CGAA GGCGCCG              TTTTGTTGATCCCCC 100 72
 CHQ57_21840 NONE
 CHQ57_21835 4688460 .. 4688472 -  -3.3  -2.64794   CTGAATGGCAGACTA                CGGTG GCA CAACG                CCGAACTGCTGTTGC  40 10
 CHQ57_21830 4688047 .. 4688062 - -11.8  -4.72272   TTTTGTTATCAAAAA              GGCGCC AAAA GGCGCC               GTTTTTCTTGTTGCA 100 56
 CHQ57_21810 4684356 .. 4684366 -  -4.6  -3.43564   TAATCGAACCTACAA                 CGGC TTT GCCA                 ACGCGGCGACAATCT  53 465
 CHQ57_21785 4679340 .. 4679361 - -10.9  -3.53012   GCTTGGCGGGCCAAA           TTCGGCTAC AAAT GCAGCCGAA            TTTGTAGCAAGGAAG  78 118
 CHQ57_21780 4678494 .. 4678517 - -19.6  -4.35116   CACCGGATAGCAAAA          GGCCCCGCCA TCAC TGGCGGGGCC           TTTTCGTTACCTAAA 100 51
 CHQ57_21750 4677105 .. 4677136 - -21.8  -3.95073   CTCGACAGCCAGAAA      CGACAAAGGCGGAT GGTG ATCCGCCTTTGTCG       TTGTGGGAGAAACTA 100 46
 CHQ57_21715 NONE
 CHQ57_21710 NONE
 CHQ57_21705 NONE
 CHQ57_21700 4663519 .. 4663536 - -14.1  -4.93877   TTTTATTAAACAAAA             GCCCCGC ATCA GCGGGGC              TCCTTCGGGCAATAA 100 63
 CHQ57_21695 4661487 .. 4661497 -  -5.4  -3.53811   TGTACTGTCTCTAAA                 CTTG AAT CAAG                 GCAATCTGTGTGAAC  56 58
 CHQ57_21690 NONE
 CHQ57_21685 4661214 .. 4661226 -  -3.4  -4.00532   TTGTTAAAGAGCAAA                CTTC ATAAA GAAG                TCAAAGGCATAGATT  58 96
 CHQ57_21680 NONE
         rrf 4657826 .. 4657836 -  -2.4  -2.76189   TAACCGACTGAACTA                 CCGC TCC GCTG                 TCTGGTTAGCTTTTT  39 120
 CHQ57_21670 4657724 .. 4657743 - -13.6  -5.37593   TCGGAAATGAAAAAA            GCCCAGTC TTTC GACTGGGC             TTCTCAATTTACTGG 100 38
 CHQ57_21665 4656660 .. 4656695 -   -17  -3.85698   CTGGGGCTTGAGAAA    CAC-CTGAGCCCGTCAC GGG GTAACGGGCTCAGAGCG    ATCGTGCTGGCGATC 100 80
 CHQ57_21650 4652625 .. 4652647 -  -4.1  -3.29471   GGTGGATTACATCAA           GGTGGATGA CAGTT TCACCCATC           GCATGCTGCAATCCC  47 260
 CHQ57_21620 4645636 .. 4645663 - -15.6  -4.05389   CACAGAGACCAGAAA        CCGGAAGCAGGC GAGT GCCCACTTCCGG         TTTTGCGCTCAAACT 100 60
 CHQ57_21615 NONE
 CHQ57_21610 NONE
 CHQ57_21605 NONE
 CHQ57_21600 4640737 .. 4640751 -  -8.5    -3.214   TTGACCACATCAAGA               CCCGC TCGGT GCGGG               AACTGGTGGGTCTGT  63 334
 CHQ57_21585 4637951 .. 4637966 -  -7.5  -5.64274   TCAGGTATAAAAAAA              CGCGG TCAATG CCGCG               TTTTTAAAATCAGGA 100 35
 CHQ57_21580 4637164 .. 4637208 - -20.8  -5.88197   TTAAACATAAAAAAA CGGCGCCCGCCCCT-G-CCGGA TTA CCCGGGCAAGAGGCGAGCGCCG ATGCATGGCTTGTTA 100 60
 CHQ57_21575 NONE
        cueR 4634225 .. 4634240 -    -9  -3.14463   AACGTCTGTTATTAA              GCGGTT AGTC AACCGC               GCTCCAACTCGTCCA  67 18
 CHQ57_21565 4633002 .. 4633016 -  -2.1  -3.11732   GTGAAACTCAGGCAA               CCTTA CCCAT CAAGG               CTACTTCGATACGAT  42 3
 CHQ57_21560 4632623 .. 4632646 -  -9.6  -5.84381   TCAGCAACAAAAAAA          GCGTATCGCC GGTT GACGATACAC           CTCTCGTTGAGATTC 100 79
        ccoG 4630974 .. 4630991 - -14.1  -4.77438   ATCCACCATTAAAAA             GGGGCGC CGTT GCGCCCC              ATTCTATCACCACTA 100 86
 CHQ57_21550 4629695 .. 4629715 -  -8.9  -3.58343   GGCATCAGGGTCAAA            GGTAGCGCC TTG AGCGCGACC            AGTTGATCGTGCGGC  69 288
 CHQ57_21545 4628843 .. 4628866 - -19.6  -5.38054   CCCGATAAACAAAAA          GCCCGCCGGT TTGC ACCGGCGGGC           TTTTTCCATGGGTTA 100 49
 CHQ57_21515 NONE
 CHQ57_21510 4621897 .. 4621909 -  -3.3  -4.03093   CACAAGCACGACAAA                CAGGC AGC GCCTT                ATCGCCATCTGTTGC  59 492
 CHQ57_21495 NONE
 CHQ57_21490 NONE
 CHQ57_21485 4616314 .. 4616349 -   -12  -2.53263   CGGATCGGGAATCGA    TCCTGGTCAGGGCAC AACACGG ATGCCCTGACC-GGA    AGCGACTCGGGGAGG  72 69
 CHQ57_21480 NONE
        ilvA 4612761 .. 4612789 - -11.7  -4.62904   AAACAGGCCCAAAAA        GAAGAGGGAGGCA TAA CGCCTCCCTCCTG        CTTTTCGCTCTGTAT 100 40
 CHQ57_21470 4611328 .. 4611356 - -19.7  -3.08671   CAGAACCACATAAAG        CAAAGAGGGAGGC AGC GCCTCCCTCCTTG        TTATCTCGCTATCCC 100 51
 CHQ57_21460 4610189 .. 4610209 -  -7.6  -2.87132   CCTCGGCGCTATACA            TCTGGTCA GTTAT CGACCAGA            TGCAACCGGGGGCTT  58 58
 CHQ57_21455 4609032 .. 4609059 -  -9.8  -2.57931   GCGACTTGCCAGAAG        TGGTGACTCGCG ATCC CGCGATTCGCCA         GCCTGGGTCCGGGTT  66 40
 CHQ57_21445 4606366 .. 4606396 - -22.8  -3.18429   CAAAACGTCGACCAA       TGAAAAAGGCGCCC GAT GGGCGCCTTTTTCA       GAATTCTTCAGAAGT 100 45
 CHQ57_21440 4604764 .. 4604780 -  -8.1  -3.23979   ATGATAATTCAGTAA              TTAGCAT GTC ATGCTAA              CCATGAATACCCATT  61 58
 CHQ57_21435 4603338 .. 4603358 - -18.3  -5.06414   TTCCCGTAACAAAAA            GGGGCCCCA TGA TGGGGCCCC            TTCTGTCGTGATCGG 100 56
 CHQ57_21410 4598349 .. 4598385 - -19.6  -3.65542   CGGATTGGGAAAAGA   GCCAGTTTGCCAGCCCC CGGA GGAGCTGGCAAAC-GGC    AGCTTATGGCTTGAA 100 56
 CHQ57_21405 4597717 .. 4597735 - -11.7  -2.95341   AGCCGAACATGAAAG             CCGGAGC ACAAG GCTCCGG             TTTCTTTATGCAGCT  75 76
 CHQ57_21360 4589182 .. 4589194 -    -2  -3.72695   ACCCTTGTTATCAAA                TTGT AATCA ACAA                CACCATAAAAGCCCG  51 56
 CHQ57_21355 4587729 .. 4587752 - -11.7  -2.99449   TTCGATATAAGGACA          GGAGAGGCC GGGTCT GGCCTCCCC           CCGCTGTAAGGGCTG  75 55
 CHQ57_21350 4586212 .. 4586231 -  -4.2  -3.06399   CCTAAGCAAATTATA            TGCGCAAG CCAA CCTGCCCA             GCCCCCGCCTACCCT  46 34
 CHQ57_21345 NONE
 CHQ57_21340 4583859 .. 4583884 -  -8.2  -4.33182   CGATCCATAAAACAA         TCTGGCGCCC CGGGGT GGGCGCCAAG          GTTAGGTTCCGGACT  81 27
 CHQ57_21335 NONE
 CHQ57_21330 NONE
 CHQ57_21325 4580780 .. 4580828 -  -2.5  -2.66695   CTGGCCACTAAAGAT GGAGATCCGCATTCTCATCCTC CGGATT GACGA-GAGAATGCGGATATTA GCACGAGGTCAGGCG  38 34
 CHQ57_21320 4580095 .. 4580107 -  -3.3  -3.72695   ACCCCCCCTAGGAAA                GCTGA AAT TCGGC                CGGGCCCAGCAAACG  53 5
 CHQ57_21315 4579813 .. 4579859 - -15.2  -4.32034   CGAGGATCAGCAAAA TCCAGATGCGAAAAGGCCGCTC ATT GAGCGGCCTTTTCTAATATGGT CGGTGTGAGAGGATT 100 22
 CHQ57_21300 4576074 .. 4576108 -  -8.5  -2.64616   TGCTGATCCACACCA    CACCGGGCGCAGCCAC CGTA GTGGCC-CGCCTGCTG     GATCGCAACGCCAAT  52 403
 CHQ57_21270 4573020 .. 4573038 - -14.6  -4.26189   GCAGAAATGCGAAAA             GCCAGCTC AAT GAGCTGGC             TTTTCTGAAAATGGC 100 37
 CHQ57_21250 NONE
 CHQ57_21245 4569133 .. 4569160 - -10.6  -3.30441   CACCATTGGCGATAA        TTGAGGGGCG AGATTATA CGCCCCCCAA         CTGATAGTTCAATCT  76 186
 CHQ57_21240 4568372 .. 4568394 - -12.1  -5.49809   GAAAGTGCAAAAAAA           TTGACCACC GCTGG GGTGGTCAA           TCTCGTCAGGCTTGG 100 31
 CHQ57_21230 4565600 .. 4565626 - -19.6   -3.9281   ACCAGTCTCAAACAA         CAAAGGGAGCCA CTA TGGCTCCCTTTG         ACTATCCCGCTCGGG 100 44
 CHQ57_21195 4555766 .. 4555776 -  -5.4  -3.16881   TATCGAGTTCACCAA                 GGAT GGC ATCC                 GTCGTCTGGCCGAAG  50 311
 CHQ57_21165 4550419 .. 4550436 -  -6.3  -3.41701   GTCAGGAAAAAATCA             GTGGCTGG CCA CCAGC-AC             CCCCTTGAGCAGGGT  56 5
 CHQ57_21160 NONE
 CHQ57_21155 4548998 .. 4549013 - -10.4  -4.87291   TAGCCGAATGAAAAA              GGGACC TTTC GGTCCC               TTTTTCTATTGCTGC 100 47
 CHQ57_21120 4540898 .. 4540915 -  -4.9  -2.87344   GATCTTGCTCACACA             GATGTAA ACGA TTACACC              AATTGTGTTAAGTAA  47 144
        lacZ 4537542 .. 4537571 -  -2.1  -3.05384   TGTTTTTGTAGGGAA       TGCTGTACACCAAT TGA ACTGGCGC-CAGCC       TAATGTAATCAGTTT  42 192
 CHQ57_21110 4536483 .. 4536503 - -12.6  -5.00884   ATCTGGTTGAAAAAA            GGCAAGGG GATCT CCCTTGCC            CTGGAGGAGGGAGTT 100 39
 CHQ57_21105 NONE
 CHQ57_21100 4533881 .. 4533907 -   -18  -3.28712   GGGTTCCCTCCAGAA         GGGAGGGCCGGC ATT GCCAACCCTCCC         TGCCAATTGTTATTT 100 35
 CHQ57_21095 4532067 .. 4532092 - -12.5  -2.81045   TGAGCGATAAGACTA         TCGGGGGCGAC GCAA GTCGCCCCCAT          CTTTTTGGCTTTTTT  77 65
        arcA NONE
        arcC 4527288 .. 4527300 -  -3.3  -2.87931   GCTATTGGCTACACA                CCCAC GGT GCGAG                TGGCGATGATATTGG  42 6
        argF 4526139 .. 4526158 - -16.4  -4.10657   TCACATGGTCGAAAA            GCCGGGGG TTAC CCCCCGGC             ACCACTACTGCGACC 100 41
 CHQ57_21065 4524605 .. 4524623 -   -16  -3.96093   CATAGTAATATGAAA             CGGGAGCC ACA GGCTCCCG             CTTTATCTTGCTTGT 100 47
 CHQ57_21045 4520122 .. 4520141 -   -15   -4.2349   TGCGGACATGCAAAA            GGGCAGCC CGCG GGCTGCCC             TTTTTATTGCTGGCC 100 58
 CHQ57_21030 4517286 .. 4517316 - -13.2  -3.68024   TTTTGTAACAGACAA       GGGGCCGGCCACCC GCC AAATGGCAGGCCCC       GCCCCCTCTGAATTA  93 75
 CHQ57_21025 NONE
 CHQ57_21020 4513801 .. 4513816 - -10.4   -5.5112   GTGAGTAATAAAAAA              GGAGGC CGAA GCCTCC               TTTTGTCTCTCCTGA 100 48
 CHQ57_21015 4512945 .. 4512978 -  -5.2  -3.48607   AGAGCACAATAAAAG     GACCCGCCTGGTGA CACGAC TCAACAAACGGGAC      TTGGCCGTGCCTCAG  56 37
 CHQ57_21010 NONE
 CHQ57_21005 4510588 .. 4510602 - -11.4  -4.17762   TATTCCCCAAAATAA               TCGGGC CGG GCCCGA               GGTGTACGGACGAGT  93 230
 CHQ57_21000 NONE
 CHQ57_20995 4507519 .. 4507533 -  -8.6  -5.37043   ACCTGACATAAAAAA               CAGTCT TCA AGACTG               ACGGTTTTTTGAGGT 100 243
 CHQ57_20980 4504286 .. 4504321 - -17.6  -5.03994   TTCTACATATAAAAA    CGGGGCTCCTTCGCTG TTGC CAGTCAAGGAGCCCCG     TTTCAGGCATGCTTC 100 92
 CHQ57_20975 4503380 .. 4503395 -  -6.2  -3.90464   CGGCAAACAACATAA              CTTTCT GACA AGAAAG               ATGAGGCCCGTACGG  65 133
        clpB 4500711 .. 4500736 - -19.1  -2.72977   AGCCGACAGATATGA         CAACGCCAGCC CGAG GGCTGGCGTTG          TTGGCATCGACACAG 100 47
 CHQ57_20960 4498364 .. 4498386 -  -2.6   -3.8211   CTCTATCCACAACAA           TCCCATCTGC GCC ACAGCTGGCA           CTTCTTCGTGCGCAA  52 492
 CHQ57_20950 4497431 .. 4497444 -  -2.3  -3.87318   AATCAGCAGATGAAA               GGCTG CCAT CAGAC                CTAAATCTGGTAACG  54 26
 CHQ57_20940 4495887 .. 4495904 -  -4.1  -3.53012   TGTTCGTTGCCGAAA             GC-GGGCT GAC AACCCAGC             AGTTGAAAACCCTCT  51 319
 CHQ57_20930 NONE
 CHQ57_20925 NONE
 CHQ57_20920 4491803 .. 4491818 -    -4  -3.53091   AGGCGCTGTTGCAAA              CCA-TGC TGT GCAATGG              GAGCGGCATGCTGTG  49 394
 CHQ57_20910 NONE
 CHQ57_20905 4490227 .. 4490249 -    -9  -2.59431   TGGCTTGATAAGTGA           GGACCACCCC ATG GGTGCGGCCC           TTGGTATGAGCGGTT  62 48
 CHQ57_20900 4489507 .. 4489523 -  -9.4  -5.20216   GACATCACCAAAAAA              GAGGCC GATTA GGCCTC              TTTTGCTATACGAGT 100 68
 CHQ57_20890 NONE
 CHQ57_20885 NONE
 CHQ57_20880 4486692 .. 4486722 -  -4.6  -3.45849   GCCAGACCACCACAA       TTCCATCCGCCCCA TAA CGGGGCTGATAATA       TCTAGCTCTCTACCC  53 27
 CHQ57_20875 4486075 .. 4486092 - -14.1   -5.1356   CTCGACCAACAAAAA             CGGCGCC ATCA GGCGCCG              TTTTTTTATTGCTGT 100 64
 CHQ57_20860 4480015 .. 4480045 - -21.4  -3.04144   GTTCCAGGTGCAATA       TAGAAAAAGGGGCC AAG GGCCCCTTTTTCTA       TATGGCTTATCCAGC 100 62
 CHQ57_20845 NONE
 CHQ57_20840 4475812 .. 4475841 - -17.9  -3.31537   AGCACAGTACATGAA       CGAAGAGGGGGCC TGCA GGCCCCCTCTTCC        ATTGGTGTCCCTGGC 100 52
 CHQ57_20830 NONE
 CHQ57_20825 NONE
         tuf 4472989 .. 4473005 - -12.3  -4.38927   CCCCTACATAAGAAA              GCCCCTA TTA TAGGGGC              TTTGCTTTATTTATG 100 52
 CHQ57_20815 4472880 .. 4472898 -  -2.3  -4.74917   ACCAAAGACACAAAA             GCCCCGT ACGAG ACGAGGT             ATATGGCAGGGGCGG  68 29
 CHQ57_20810 NONE
        nusG 4471849 .. 4471881 -   -15   -4.3255   TCCCCAACTAATAAA      GGGGCAGCGAAT TATAGTGAC ATTCGCTGCCCC      TGACAACCGTTAACG 100 53
        rplK NONE
 CHQ57_20795 4470592 .. 4470627 - -15.8  -2.60571   AAGCCCCCAACCAAT    CAAGGCGCAAAATTATA GAT TA-AATTTTGCGCCTTG    TAAAACTCATCAATT  95 39
 CHQ57_20790 4469867 .. 4469878 -  -5.8  -3.54626   GAATAAACTCAAACA                GCCT AAAT AGGC                 GAGGATCAAGCAGCA  58 31
 CHQ57_20785 4469406 .. 4469431 - -14.1  -4.64766   TCTACAGCGCAAAAA         GGCTGGTGAAC AAAT ATTCACCAGCC          CTAGCCTGTTTTATC 100 64
        rpoB 4465206 .. 4465221 -  -6.2  -3.63569   TCAATTCTCGAACAA              TAAGAG CGAG CTCTTA               CTCTTCGTCCAGCTC  60 23
        rpoC 4460781 .. 4460799 - -12.4  -5.12971   AACAGCCAATAAAAA             GGGCCCCT TGA AGGAGCCC             TTTTCGATCACTGCA 100 49
 CHQ57_20770 NONE
 CHQ57_20765 4459468 .. 4459485 - -12.7  -5.56264   GCCAAAGACAAAAAA             GCCCCTC CTGG GAGGGGC              TCTTCATTCAGCCGT 100 44
 CHQ57_20760 NONE
        tusC NONE
        dsrH 4458230 .. 4458253 -  -4.4   -4.6856   TAAACATGTGAAAAA          TCCTCCCCGC AGAT ACGGGGACGC           GAAATTTTATGCCCT  72 145
 CHQ57_20745 NONE
 CHQ57_20740 4457217 .. 4457246 -  -6.3  -3.26449   CCCTAGATAACTGAA       GGTGCGCAGAGCC AAAA GACCCTGCGCAAG        CGGATTACCAGCGGA  54 30
        fusA 4455039 .. 4455060 - -15.9  -3.59979   TCCTTCTAGGTTAAA           CCCGCCTAC CGTC GTAGGCGGG            GAATCATAAATTACT 100 36
         tuf 4453786 .. 4453805 -  -9.2  -5.61881   GCCCAAAAAGAAAAA            GGGGCAGC CGAA GCCACCCC             TTTTGATGTTTGTAA 100 52
 CHQ57_20725 4453118 .. 4453130 -  -3.4  -4.69622   AGATAATTGCAAAAA                GATG GCTTT CATC                AACCGTTCGCTCATA  68 73
 CHQ57_20720 4452863 .. 4452873 -    -4  -2.94747   TCACTTCACCAGACA                 TTGA AAA TCAA                 CAAAATTGTTTGATG  45 5
 CHQ57_20715 4451147 .. 4451157 -  -5.4  -3.53811   TGTACTGTCTCTAAA                 CTTG AAT CAAG                 GCAATCTGTGTGAAC  56 58
 CHQ57_20710 NONE
 CHQ57_20705 4450874 .. 4450886 -  -3.4  -4.00532   TTGTTAAAGAGCAAA                CTTC ATAAA GAAG                TCAAAGGCATAGATT  58 96
 CHQ57_20700 NONE
         rrf 4447562 .. 4447574 -  -4.1  -2.70932   CCTCTCGGCCAATCA                TGCAA TAT CTGCA                CAACTGCTAATTGGG  43 42
 CHQ57_20690 4447386 .. 4447407 - -12.3  -5.04601   GCCAGAAAGCAAAAA           GGCCTTCCC GATT GGAAAGGCC            TTCAAATTAGTGGCG 100 36
 CHQ57_20685 NONE
 CHQ57_20680 4444710 .. 4444727 -  -4.7  -3.74347   TCCACAAATGGCAAA             GCCGGCC GCTG GACCCGC              TCTATCCCATCGTGT  58 434
 CHQ57_20645 4438575 .. 4438588 -  -3.8  -3.86244   GGATAAGAAGAAATA               CCCA AAAAAA TGGG                GAAACTCGACTCAAC  58 36
 CHQ57_20640 4438011 .. 4438036 - -19.1  -4.30441   CCAGAACACGTAAAA         GGGCCACTGTC TCGC GACAGTGGCCC          TCAAACCTGACCATG 100 107
 CHQ57_20635 4435510 .. 4435530 - -15.5  -3.67611   GCCAGTTGAAGATAA            TTTGGCCCC TGA GGGGCCAAA            GAAAAAGTTATAAGC 100 237
 CHQ57_20630 4434284 .. 4434323 - -12.9  -5.22006   CGAGTACAACAAAAA  CGACACCCGCC-GCCGCA AACAG CGCAGCCAACGGGTGTCG  AGGGAGTGACAAAGG 100 56
 CHQ57_20625 4431657 .. 4431687 - -18.5  -4.11216   CTCCGATTGGGAAAA       TAAAAACGGCGCC TTGAT GGCGCCGTTTTTA       TTGGCATTTTTTATT 100 36
 CHQ57_20615 4430472 .. 4430512 - -12.8  -4.62471   GCCAAGGCGTAAAAA CAGACACAAAAAATGGGCC AACA GGCCCATTTTTCTTG-CTG  GTGATCAGCTGCCCG 100 92
 CHQ57_20600 4426809 .. 4426828 -  -6.4  -3.05463   ATCCTCGGGATCGAA            CCTGGATC CCAT GATCCAGC             CTTCCCCTTCCCCTG  53 50
 CHQ57_20595 4426038 .. 4426056 -    -3  -3.17051   GCGCCACCATCAATA             TGGACGGC ACA GCCCTCTA             CCAGGGAGTCACAGC  43 389
 CHQ57_20585 4424633 .. 4424663 -    -6  -2.74782   ACAAAGGGGCAAGGA       TTCGGCGAGCAC CAAGGAC GTGCCCGCCGTG       AAGGTCAACCGTGGT  51 30
 CHQ57_20580 4423871 .. 4423885 -  -4.2   -3.1372   CAGCGCCGAGTAAGA               GAACGC CCG GCCTTC               CGCATCATGAGTAAG  47 98
 CHQ57_20570 NONE
 CHQ57_20565 4422101 .. 4422118 - -10.5  -3.07233   GCAGAAGGGTCAACA             CGGCAGG CGAA CCCGCCG              TGTCACTACCGGGCT  72 40
 CHQ57_20560 4420359 .. 4420384 -  -8.2  -2.53995   ATCGACCGCAAGCCA         GCCAGCCGGA TCCCTC CCCGACCGGC          CAGCTGACACCCTGG  58 125
 CHQ57_20555 4418596 .. 4418621 - -11.9  -5.24129   GCTGGCCATAAAAAA         TGGGGTGACAT TTCC ATGTCACCCCC          TCGCAAATAGCATGT 100 385
 CHQ57_20550 4417370 .. 4417410 - -14.1  -3.44527   GATGGATTACTACAA CTGGCGGCGTCCACATCA ACACAA TGACG-GGATGCCGCCAG  CAAAAGCCGAAGATC  95 144
 CHQ57_20540 4415753 .. 4415781 - -12.5   -4.4009   GCTGATGGCAGAAAA        CAAAACACCGGCC TAA AGCCGGTGTTTTC        AGGTAGCAAAGAGGC 100 45
 CHQ57_20535 4412457 .. 4412477 -   -14  -4.18401   CGACACAGCGTAAAA            CGGGGCCA ACATA TGGCCCCG            TTTTTTTATTCTGGT 100 48
 CHQ57_20525 4410368 .. 4410393 - -21.9  -4.57073   CATGTCTGTTAAAAA         GGCCCCCTCGC GTTG GCGAGGGGGCC          TTTTTCATATCATGG 100 61
 CHQ57_20485 NONE
 CHQ57_20480 NONE
        lptC NONE
        lptA NONE
        lptB NONE
 CHQ57_20460 4400764 .. 4400778 -  -2.1  -2.71712   TTGTTTTGCCTAAAC              CAGGCG TTTG CGC-TG               ATTGGATGGCGGGAT  39 5
        raiA NONE
        ptsN NONE
 CHQ57_20445 NONE
 CHQ57_20440 4398711 .. 4398730 -   -10  -4.90266   CTGATGAACGAAAAA            GCCAGCAA GAAT CTGCTGGC             TTGTCGGGATTTTGC 100 93
 CHQ57_20390 4390831 .. 4390846 - -11.8  -3.46602   CTCTTCATATCACAA              GGGCGG GTAA CCGCCC               TTTGTCATTTCTGCA  82 71
 CHQ57_20370 4386295 .. 4386322 -  -7.1  -3.15999   CTGTTACAGACCCAA        TTGCTTATGGG GGCTCT CCCACAAACAA         CAAACGATGGCCTAC  57 231
 CHQ57_20365 NONE
 CHQ57_20360 4385369 .. 4385387 - -11.7  -5.84381   TTACCAATAAAAAAA             GCCTGGC ACATG GCCAGGC             TTTTTTGACACTCGT 100 63
        petA 4384533 .. 4384551 -    -3  -3.64716   TCAGTTTGGAAAACA             TGGTCAGG CCT CCTTGCCA             TCATCGGCACCGACC  51 10
 CHQ57_20350 NONE
 CHQ57_20345 4382527 .. 4382557 - -11.3  -4.27774   ATTAAAAAGCAGAAA       CGGCAATGAAG CATCTTGGT CTTCATTGCCG       TGCATTATATTACCC  93 53
 CHQ57_20340 NONE
 CHQ57_20335 4381409 .. 4381455 - -16.3  -3.72893   CACGCTGGTAGCAAA CA-GAAATAAAAAAACGCAGCC AGTT GGCTGCGTTTTTTTATTTGATG ACTTTCAGCGTCGGC 100 16
        rsmI 4376934 .. 4376952 -  -4.4  -2.78596   GAGGCGCGGATTATA             GCCTTGCG ATA CGCACGGG             GTAAACCGGCAATTC  46 149
        rnpB 4376496 .. 4376521 - -16.9  -5.93252   TCCAAAAATAAAAAA         GAGCCCCACGA TAAA TCGCGGGGCTC          TTCGGAATGAGGTCG 100 36
 CHQ57_20300 NONE
 CHQ57_20295 NONE
        ftsL NONE
 CHQ57_20285 4372622 .. 4372632 -  -3.2  -2.57647   ATGCAGCAGATCAAG                 TACG TGG CGCA                 GCATGGGTGGCCTCC  40 10
 CHQ57_20280 NONE
 CHQ57_20275 NONE
 CHQ57_20270 NONE
 CHQ57_20265 4367313 .. 4367329 -  -2.1  -3.07816   CTGCGACGGAGCGAA              GGGCGCT CAT AGTGCCA              GCACCATTTTGGTGA  42 15
 CHQ57_20260 NONE
        murG NONE
 CHQ57_20250 4363472 .. 4363487 -  -5.4  -3.34013   CACCCCTGCAATGAA              GC-CACC CTT GGTGCGC              CCTTGTGCACTTGCC  54 143
 CHQ57_20245 NONE
 CHQ57_20240 4361522 .. 4361532 -  -3.2  -2.59323   AAAATCTTTTAGAAC                 TCGC CAC GCAA                 CCAGTTGCTGACCCG  40 8
 CHQ57_20235 NONE
 CHQ57_20230 4359252 .. 4359286 -   -13   -2.9838   TGGAAAAATGAATGA     CAGGACGTCGGT GCGGAGAGATG ACCGACGTCCTG     TTGCACAGCTATCAG  83 37
 CHQ57_20225 NONE
 CHQ57_20220 4355428 .. 4355452 - -17.2  -4.82901   CCTGTTTCATAAAAA          CAAGGCGGGC ACCGG GCCCGCCTTG          TCATCGCCTCATCCA 100 42
 CHQ57_20215 4354833 .. 4354847 -  -8.5  -5.36441   GCCGCACACAAAAAA               GGGCC GACAA GGCCC               TTTTTTAATTGCTGT 100 73
 CHQ57_20165 4346321 .. 4346343 - -11.3   -4.8083   CAACAGCAGGAAAAA           TGGCCTGCC ACAAA GGCAAGCCA           TTGATTTTAAAAACA 100 61
 CHQ57_20160 NONE
        aceE 4342561 .. 4342584 - -13.2  -2.52795   AACCTTTGCAAGGCA          GTGCCGGG-CA ATG TGTCCCGGCAC          TGCACTCGATCCTCT  80 40
        aceF 4340597 .. 4340617 - -11.8  -4.95876   AATGAGAAGTAAAAA            GGGCAGGC TCTGG GCCCGCCC            TCTCACTTACAGGAC 100 32
        lpdA 4338990 .. 4339007 - -12.7  -5.95286   ATCAAAAACAAAAAA             GCCGCTC ACGA GAGCGGC              TTTTTTCATGTTGGT 100 54
 CHQ57_20140 4337942 .. 4337958 - -13.7   -5.0538   GGTCAGGCCAAAAAA              GGGCGCT GCT AGCGCCC              TTTTTTACAATCGTA 100 17
 CHQ57_20120 NONE
        acnB 4328517 .. 4328539 - -20.6   -5.8187   TACCCAATAAAAAAA           GAGCCCCGGC ACT GCCGGGGCTC           TGTTGCATCAGATGA 100 58
 CHQ57_20110 4326509 .. 4326524 - -10.4  -3.28712   GTCGGGGGTGGATAA              GGGGGA TGAC TCCCCC               ACTCCCTCAGCGCGA  72 152
 CHQ57_20105 NONE
 CHQ57_20100 4323789 .. 4323808 - -10.7  -5.71712   CTTCAGATAAAAAAA            GACCCGC ACGAAA GCGGGTC             ATATCAGCCTGTCAG 100 37
 CHQ57_20095 4322131 .. 4322155 -  -7.1  -2.78816   GCACCGCCGAGGAGA          TGCAGGCAG AGATTGG CTGCCTGCC          GGGAGCCGTCTGCCC  50 240
 CHQ57_20075 NONE
 CHQ57_20070 NONE
 CHQ57_20065 4319721 .. 4319739 -  -4.4  -3.11962   GGGCAATATATAAAT             GGTGCCGG CTA CCGGAATC             GAACTGGTGACCTAC  48 6
 CHQ57_20060 NONE
 CHQ57_20055 4319522 .. 4319541 - -13.6  -5.85178   AACAGGCAAAAAAAA            GCCCAGCA TTGC TGCTGGGC             TTTTGTGTTGGCTCC 100 34
 CHQ57_20050 4318702 .. 4318714 - -10.5  -4.19624   CAGGGGGAAGACAAA                CCCGG CAC CCGGG                AAAATTGAGGGGCGG  91 120
 CHQ57_20045 4317292 .. 4317309 -  -9.1  -3.79445   AACGAGCAATGCAAA             GAGGCCC CGAA GAGCCTC              TTTTGTTATCTGAAC  76 46
 CHQ57_20030 4313987 .. 4313999 -  -4.7  -2.56539   GTGAAGGGACAAGAG                CTGGC CGT GCCTG                AGCTGGATGAGTTTG  43 290
 CHQ57_20015 4311481 .. 4311504 -  -6.6  -2.69661   AAGTGACAACAAGAG          GTCTGGCGAG CCTG CTCGCCTGAA           AGGAAGGGTGACCCT  53 76
         bfr 4310885 .. 4310898 -  -9.5  -5.25893   ACAGATATGAAAAAA               CCCGC CTTG GCGGG                TTTTTAAGTCAGCTT 100 57
 CHQ57_20005 NONE
 CHQ57_20000 4308028 .. 4308048 - -16.9  -4.87133   ATCTTTCAAATAAAA            GAGCCGGAC TGT GTCCGGCTC            TTTGCTATCTGTTAT 100 53
 CHQ57_19990 4305971 .. 4305991 - -15.5  -5.14626   ACCATGAAAATAAAA            GGGCAGGAT GGA ATCCTGCCC            TTTCTCATGGCGTCA 100 63
 CHQ57_19940 4295548 .. 4295562 -  -6.4  -3.82097   GGCAAAGGGATCAAA               CCCATT CTT AACGGG               ATCGCCAAAAACCCT  63 485
 CHQ57_19930 4293904 .. 4293917 -  -6.7  -3.70902   TTGGCCAGATCGAAA               TGGGA ACGT TCCCA                TTTCGTGGTCAACAT  63 82
 CHQ57_19925 4292314 .. 4292341 - -14.8  -2.99438   CGAATAAAAAATGGA        GAGGGCGGCCCC TTGC GAGGCCGCCCTG         ATGAGTGGACTCAAG  93 36
        treC NONE
 CHQ57_19915 4289871 .. 4289898 -  -2.9  -5.42862   AGATGTTCAAAAAAA       CTG-AC-TGTGAT GTAA ATCACAGGTTCAG        GTACAGCTCACGGCG  85 132
 CHQ57_19910 4289194 .. 4289223 - -20.1  -4.42386   GCTCGATGCACAAAA       GCAGAGGGCCCCGC CAT GCGGGGCCCTCT-C       TCTGAACGCAGTGTC 100 96
 CHQ57_19900 4286694 .. 4286723 - -20.9  -3.89212   GATCCACACAGCAAA       CAACAAAGGCGCC TCAA GGCGCCTTTGTTG        TGTCTGGACAGTTTT 100 74
 CHQ57_19890 4284398 .. 4284421 - -16.8  -4.52857   ATTCCTTATATAAAA          GGCCCATCAC GAAA GTGATGGGCC           TTTTGTTTTTACTCC 100 364
 CHQ57_19845 4278719 .. 4278734 -  -6.2  -3.27766   AACATTGCACATTAA              TTGACT AGGC AGTCAA               AAGCGCGATCCAGAG  56 49
 CHQ57_19840 NONE
 CHQ57_19835 NONE
 CHQ57_19830 4275045 .. 4275080 -  -6.7  -2.52464   CGCGCCCGCAAGCCA    CGCGTCTCCATGGCG CCGCGC CCCCACGGAGCCCCG     AGTCGTTACGACGAC  48 204
 CHQ57_19820 NONE
 CHQ57_19815 NONE
 CHQ57_19810 4271064 .. 4271083 -   -15  -5.31275   CGCCACGATAAAAAA            CGGGAGGC TTCG GCCTCCCG             TTTTCATTCACGTCA 100 44
 CHQ57_19800 4268974 .. 4268996 - -16.3   -3.4252   GCCCACTGATGACAA           GGGGCCGAC ACATG GTCGGCCCC           TTCTTTTTGCTCCTT 100 56
 CHQ57_19790 4267281 .. 4267312 -   -13  -4.09685   GGCTAGCGGCCAAAA      CAGAAGGGCGCCTC TTTG GAGGCGCCCTTTTT       ACATATGACCTGTGC 100 53
 CHQ57_19760 4260735 .. 4260755 - -18.3  -4.73388   AAGCGGCAGCAAAAA            GCCCGGGTC AGT GACCCGGGC            TTTTTTATATCTGGC 100 52
 CHQ57_19745 4257550 .. 4257567 - -11.3  -4.77036   GTCGACCATGAAAAA             GGTGAGC CCGG GCTCACC              TTTTTCGTCACTACC 100 65
 CHQ57_19725 4252729 .. 4252757 - -21.1  -4.82863   GAAGTAGAAAAGAAA        CAGCCCAGCAAGC GTA GCCTGCTGGGCTG        TGGGTCAGGCTGACC 100 74
 CHQ57_19705 4248796 .. 4248814 -   -16  -4.27316   CCCCGGAATGCAAAA             CGCCCCGA CAA TCGGGGCG             TTTTCTTTTCAGCTC 100 129
 CHQ57_19685 4244580 .. 4244594 -  -6.4  -3.02144   CGATCTGCCGGAAGA               GCACCT TGC AGGTAC               AAGGTGAGGCGAGAT  53 70
        katG 4242230 .. 4242256 - -20.2  -5.67063   CTCAGGACAAAAAAA         GACCCCGCACAC CGG GTGTGCGGGGCC         GTCGGGTCAGCCTTA 100 38
 CHQ57_19675 NONE
 CHQ57_19670 4240884 .. 4240908 - -17.2  -2.93818   AATAAACCACAACGA          CAAGGGGGCC CTGAC GGCCCCCTTG          TTTCATGCTGCAACC 100 45
 CHQ57_19650 NONE
 CHQ57_19645 4236429 .. 4236452 - -14.6  -5.00895   CTGACCAGACAAAAA          GAGACCCGCC GGAT AGCGGGTCTC           TTTTTGTGAATGGAA 100 56
 CHQ57_19625 4229967 .. 4230014 -  -6.5  -2.72144   CGATGTGGGGGAAAC CATGTG-T-GAAGTTGTGGTGGT TTGC ACCACCACAACCCGTATCACACG TTAAGGCAGACTATT  51 39
 CHQ57_19620 4229527 .. 4229539 -  -3.4  -3.28119   AGGTATCTACACTAA                GCAA TCGGG TTGC                TTACATATAATTGAG  47 26
 CHQ57_19615 NONE
 CHQ57_19610 NONE
 CHQ57_19605 NONE
 CHQ57_19600 4224262 .. 4224274 -  -4.1  -3.90511   AACCAGAAAAAGCAA                GATGA TTG TCACC                ATGAACAGAGAGATT  56 354
 CHQ57_19585 4220928 .. 4220938 -  -6.8  -3.75229   CAAACCACAGCGAAA                 GCTG TAT CAGC                 AGTCAATCTTCAAGC  66 210
 CHQ57_19550 4212548 .. 4212580 - -19.3  -2.78463   AGTCGCGTCAGCACA      CAAAAAGGGCTCCCG CAT CGGGAGCCCTTTTCA      CATAAAAACAAGCAA 100 49
 CHQ57_19545 4212238 .. 4212260 - -14.9  -3.72989   AAAGCCATATGCAAA           CAGGGCTCC TTCTT GGAGCCCTG           CTTGTTTCATCCCTG 100 43
 CHQ57_19535 4209927 .. 4209938 -    -3  -2.92653   ACGAGCGGGATAAAT                GATT TATC AATC                 TGAGTTGACCAAGGG  42 184
        zntB NONE
 CHQ57_19495 4204216 .. 4204231 - -10.4  -5.56568   ACATGATCAAAAAAA              GGCTCC TCGT GGAGCC               TTTTTCATTCTGGCT 100 30
 CHQ57_19435 4190093 .. 4190116 -  -5.3   -3.9777   GCGAACATGGATAAA          CCGTCCA GAAGAGTGAG TGGACGG           CACTATAAAGGGCGG  63 197
 CHQ57_19430 4189460 .. 4189475 -  -5.4  -4.82901   GGTGTGGCACAAAAA              TAGCCT TATG AGGCCA               GCAAGGCCCCGCTCG  78 15
 CHQ57_19425 4187312 .. 4187330 -   -16  -4.73388   AACGCCCACGAAAAA             GCCCTCGC ACT GCGAGGGC             TTTTTTTATCGTGTT 100 53
 CHQ57_19420 4185586 .. 4185605 -  -2.8  -3.26471   CGATGTCTACACCAA            GGATCGTGC CAA GCAGG-TCC            AGACAGTGAGCTACG  43 445
        gspC NONE
        gspD NONE
        gspE NONE
        gspF 4172428 .. 4172443 -  -5.4  -3.02166   TCCCTAACGAAATGA              GATGGC ATGA ACCATC               AACGATTAACTGTTA  50 103
        gspG 4171949 .. 4171971 -  -4.8  -2.62184   GCCTCGCCCACAGCA           GCTTGATGGC AGC GCAATCAATC           ACTTATTGGAAATCC  45 28
        gspH NONE
        gspI 4170970 .. 4170986 -  -3.6    -3.727   TCCAGCAGAGTGAAA              TCGTCC TGACT GGACGT              CATTTGGGTGTCGTT  56 49
        gspJ 4170134 .. 4170157 -  -7.5  -2.52516   GCCCCGATGAGGAAC          TGACGGCGAC GAATT GT-GCCGTCA          TCTTCAGTGACGCTC  56 156
 CHQ57_19335 4168859 .. 4168902 -  -2.2  -2.70946   CTCGCTCACAAATAT CTCTCCTGCCATTCCCGT CCGCATCC AGGGGATGGGCGGGAGCG CAGCCTTTGGCTGCT  39 96
        gspL NONE
 CHQ57_19325 4167105 .. 4167127 -  -4.7  -3.16783   GACTCAACTGAAAAT           GTCTGGCCT TGACC AGGCCCGGC           GCCCCACAGGGACGA  49 78
 CHQ57_19320 4166267 .. 4166288 - -14.5  -2.97017   AACCCCATAACGACA           TAACCCCGC CGAA GCGGGGTTA            TTTTCATCATGCGTC  90 61
 CHQ57_19310 4163966 .. 4163983 - -12.7  -3.81339   GACGCACAATGGAAA             GGGCTGC CCGG GCAGCCC              TTTCTCGTTGATGTC  91 51
 CHQ57_19300 NONE
        cysQ 4161591 .. 4161620 - -20.9  -2.87468   GCGGATCACACCAGA       CAATCAGGCGACC ATGA GGTCGCCTGATTG        AGTCTTGCAATGAAA 100 52
 CHQ57_19290 4159913 .. 4159938 - -19.1  -5.14563   GGCCCCATGAAAAAA         GAGAGGCGACC CCGG GGTCGCCTCTC          TCATTTTGTTGCCGC 100 50
        metB NONE
 CHQ57_19265 4154342 .. 4154364 - -16.3   -3.2794   GGCGAGCCATAGCAA           GAGGGCGCC AACCG GGCGCCCTC           TGTTTATTTGCGGTG 100 86
 CHQ57_19240 4150231 .. 4150247 -  -6.5  -4.13767   GCTGCGACTGGAAAA              TCCCTTC CTC GAGGGGA              TCAACTTCGACTATC  68 96
 CHQ57_19225 4147211 .. 4147222 -  -7.2  -3.53012   CTCCTTGTGGCTAAA                CCCG GATC CGGG                 TGGTGGCGATGGTGT  61 77
 CHQ57_19220 NONE
 CHQ57_19215 4145988 .. 4146016 - -13.2  -4.68593   GGGACTAGTCAAAAA        GAGAGGCTCAGG CCGGC CCTGAGCCTCTG        CATATCACTCGGCTT 100 30
 CHQ57_19195 4141815 .. 4141831 -  -2.2  -3.26545   TTCATACAGTATCAA              GCCCAA TTTAT CTGAGC              AGGGCCAAGAGTCCG  43 16
        recA 4140654 .. 4140673 - -12.1  -3.65317   AGTCATAAATGACAA            GGCCGGG GGTTAG CCCGGCC             TCACTGTTATTCGAA  88 32
 CHQ57_19185 4140067 .. 4140077 -  -8.2  -3.73088   ACACTGCAGGAATAA                 GGCG GGT CGCC                 TGACCTGTATCGGGA  72 83
 CHQ57_19180 NONE
 CHQ57_19175 4135831 .. 4135845 -  -2.8  -4.06055   ATGGTTGAAACTAAA               TCAATC AGG GATTGT               TCCCCAAGGGCTGCT  58 15
        csrA 4135510 .. 4135530 - -12.6  -5.55855   CGCAAAAAAACAAAA            GGCGACAC AACCA GTGTCGCC            TTAAAGCAGCTATCG 100 48
 CHQ57_19165 NONE
 CHQ57_19160 4135090 .. 4135107 -  -8.5  -5.77632   AAAACGATAAAAAAA             GCTTACT TATC AGTAAGC              CTTTTCCAAAGTGTC 100 85
 CHQ57_19155 NONE
 CHQ57_19150 NONE
 CHQ57_19145 NONE
 CHQ57_19140 4134651 .. 4134674 - -14.6  -5.71712   CGGCACATAAAAAAA          CAGCCCCGAC CTAA GTCGAGGCTG           TCTGTATGGTGCGCC 100 32
        lptF NONE
 CHQ57_19100 4123729 .. 4123759 - -24.2   -3.7282   GCAGGGTATGAATAA       CAAGAAGGGCACCC AGT GGGTGCCCTTCTTG       TTTGGTCTATGCAGG 100 44
 CHQ57_19090 4122910 .. 4122939 - -22.3  -5.14477   CAGACACTGAAAAAA       CGTAAGGCCACCC GCTT GGGTGGCCTTACG        TCATTGATTAGTTGA 100 41
 CHQ57_19085 4120855 .. 4120877 - -18.4  -4.87665   TTGCAGGCATAAAAA           CGCCGCCGGC ATA ACCGGCGGCG           CACTCTTGTTGGCAC 100 56
 CHQ57_19080 4119297 .. 4119314 - -11.3  -5.61596   ACGGTCATAAAAAAA             CGACTCC ATTT GGAGTCG              TTTTTATCAGAGCCA 100 75
 CHQ57_19070 4118636 .. 4118650 -  -5.6  -2.50113   GATCAGGGCAGCAAG               GGGATC AAT GAGCCC               TATGTTCCAGGTCAG  45 297
 CHQ57_19060 NONE
 CHQ57_19055 4115955 .. 4115989 -   -15  -3.54424   TGTCACCGCCCCAAA     CGCGAACGCCACAGCA TTT CGCTGTGGCGTTCGTC     TTTACCTGTGTGTCA 100 49
 CHQ57_19050 4115605 .. 4115623 - -13.2  -3.09516   TCGGGCATTAGTCAA             TGCCAGCA CCC TGCTGGCA             ATGCCTATTTCAGCC  83 121
 CHQ57_19045 4114513 .. 4114531 -   -16  -3.21593   GACGGGGGCATAACA             GGGCGAGC CGC GCTCGCCC             TCTCATCAACTTAGT 100 36
        deoA NONE
 CHQ57_19035 NONE
        deoD 4111045 .. 4111064 -   -15  -5.24129   TCGGCTCATAAAAAA            CGGCGACC CGAG GGTCGCCG             TTTTGCATGATGTGA 100 48
        serB 4109262 .. 4109280 -  -6.7  -2.70932   GTGCGCGGCTAATCA             GGGATCA AGTTG CGATCCC             AGCGGCGATCGCGAC  53 0
 CHQ57_19015 4108276 .. 4108296 - -16.9  -3.90112   CCCGCCTGAACGAAA            CAGGGCGCA ACA TGCGCCCTG            TTTTTATTGTCATGC 100 35
 CHQ57_19005 4104334 .. 4104373 - -17.5  -3.32963   AGCCCCAGTCCAGAA  CAAATAAAAAGGAGCGC CGGTTT GCGCTCCTTTTTATTTA   TTGCTGAATCTTCAC 100 68
 CHQ57_18990 4102714 .. 4102729 - -11.8  -5.46657   GATGGCAATAAAAAA              CCCGGC TGGC GCCGGG               TTTTACACGATTACT 100 36
 CHQ57_18985 4102154 .. 4102191 - -19.5  -2.60075   TCCCTGCCAACCAAT   GA-AAAAGCGGGTAACAC CAG GTGTTACCCGCTTTTCTC   TATGGGGCCATCGCT 100 47
 CHQ57_18970 NONE
 CHQ57_18965 NONE
 CHQ57_18960 4099655 .. 4099676 - -15.9  -4.96848   GTTCCGATATAAAAA           GAGGCCAGC ATAT GCTGGCCTC            TCTCTTTTCTCTGAT 100 55
 CHQ57_18945 4096034 .. 4096053 - -13.6  -4.09864   ATCCACTTGGCAAAA            CGGCCATC CGAG GATGGCCG             TTGCTGCAGGTATGG 100 42
 CHQ57_18925 NONE
 CHQ57_18920 NONE
 CHQ57_18915 NONE
 CHQ57_18910 NONE
 CHQ57_18905 4089860 .. 4089907 - -19.4  -2.73364   CCGCCAGCTGAATCA GCCGAATGAAAAAGCCCCGAAC CTGA GTTCGGGGCTTTTTCATTTATC GAGCGAGACACTTGC 100 42
 CHQ57_18890 4086901 .. 4086936 - -13.2   -4.8083   GAACAGGAGTAAAAA    CACGAGTAAGGGGCGC CTGG GCGCCCCATACTCGAC     CTGCTGTTCCCCTGA 100 42
 CHQ57_18880 4085479 .. 4085501 -  -6.2  -3.90586   ACAGGATCGCACAAA           GGCTCAAACC CAG GGCCTGATCC           TCAGTTGAGACGAAA  65 26
 CHQ57_18870 4084199 .. 4084212 -  -3.1  -2.62545   CACAGTGCAAAAAGC               TGAAC AAGC GTCCA                TTAATGTCAGTGCTG  40 32
 CHQ57_18865 4083500 .. 4083511 -    -3  -2.64616   CTGTCAGTCAGATCA                GAAT GTGA ATTC                 GCCGCCGATGAACCA  40 11
 CHQ57_18860 4082725 .. 4082754 - -25.1  -3.28712   GGGCGCTTGTGATAA       GGCCCGCTGCCCA GAGG TGGGCAGCGGGCC        TTGAAGTGCATCACA 100 69
        aguA 4080235 .. 4080249 - -11.4  -4.70453   AAGCAAGAGATAAAA               CCCCAC GGC GTGGGG               TTTTGAATACCAACC 100 193
 CHQ57_18845 4078310 .. 4078344 - -15.8  -4.29472   CAAAGTAAAACTAAA     CGGCCTGAGCCCGGTA CAG TACCGAACTCAGACCA     TGTCATCCGCCAGCT 100 128
 CHQ57_18830 4074012 .. 4074042 - -14.9  -4.07568   CCGGTGCGCTGAAAA      CAG-GAAAACGCCC GTTT GGGCGTTTTCTCTG       GCTGGCACCCTTTCA 100 80
 CHQ57_18825 4072537 .. 4072550 -  -3.7  -4.20367   GCCGCCAACAAACAA               CGTCC GAAT GGGCG                TTTTTTTATTATCCA  62 75
 CHQ57_18810 4068637 .. 4068653 - -13.7  -3.02511   CCCACTTGCCCAAGA              GGCGGCA CTT TGCCGCC              GTTTTGTTGATCCTG  76 111
 CHQ57_18800 4067122 .. 4067139 - -14.1  -4.84311   TGCCAGACAACAAAA             CGGGCGC CGAA GCGCCCG              TTGCTATTTCTATCT 100 58
 CHQ57_18790 4065627 .. 4065647 - -12.6  -3.05844   GGCGGTATTTGAACA            TCAGGCCC GCAAG GGGCCTGA            TGAAGATAGAGAGTG  79 42
 CHQ57_18785 4065304 .. 4065321 -  -4.1  -3.35046   CGAGCTCTGCAAACA             GGTCCAT GGCT ATGTACC              CCGCGTACAGTCCGA  49 17
 CHQ57_18780 4064156 .. 4064170 -  -7.1  -4.06678   ACTTATCCACAGAAA               TGCCG AAAAA CGGCA               CTATTGGCATCATGA  70 119
 CHQ57_18775 4063829 .. 4063839 -    -4  -2.94747   TCACTTCACCAGACA                 TTGA AAA TCAA                 CAAAATTGTTTGATG  45 5
 CHQ57_18770 4062075 .. 4062096 -  -5.1  -2.90508   TAAGCCAGATAAGCA           CTGACACAC CAAG GCGCATCAG            GTCTTTGCTCTAACT  49 88
 CHQ57_18765 4061807 .. 4061835 - -13.4  -4.65747   CAAGGCTGAAGAAAA        CAGAGTTAAGAA TTTTG TTCTTAACTCTG        CATTCTTGTTAGCAA 100 50
 CHQ57_18760 NONE
         rrf 4058469 .. 4058482 -  -3.1  -2.70932   CCTCTCGGCCAATGA               CGTGA TTTT TCACA                TCATCGTTTAATTGG  41 43
 CHQ57_18750 4058292 .. 4058313 - -15.9  -5.04601   GCCAGAAAGCAAAAA           GGCCTTCCC GATT GGGAAGGCC            TTTCAAATTAGTGGC 100 37
 CHQ57_18745 4057176 .. 4057191 -  -3.2  -2.84602   GGGAGTGGACGAAAC              CAAGCT CTCC AGCATG               TTCGATCCCTTCGTG  42 247
 CHQ57_18730 4054085 .. 4054095 -  -2.4  -2.82516   TGGGTCATGATCAGA                 TCCC CAT GGGC                 GGGCCCATGCGCCCG  39 10
 CHQ57_18725 4051945 .. 4051961 - -10.8  -5.40072   GGGGGCGTAAAAAAA              CCGGGC ACTGG GCCCGG              TTGAAAAACCTGCGC 100 192
 CHQ57_18720 4049636 .. 4049651 - -11.8  -4.77165   CCGGCCACAAGAAAA              GGGCCC CGCA GGGCCC               TGATGTCATGGTCTG 100 74
 CHQ57_18715 4047285 .. 4047305 -   -14  -4.18702   ACAAGCGGCAACAAA            GAGCCCGC ACGGG GCGGGCTC            TGAATGGCAATAACA 100 52
 CHQ57_18710 NONE
 CHQ57_18705 4045763 .. 4045780 - -14.1  -4.45544   CTGGATCAATGAAAA             GGGGCGC TTCA GCGCCCC              TTGTTGCAACCACCA 100 56
        srlA NONE
 CHQ57_18690 NONE
 CHQ57_18685 NONE
 CHQ57_18680 4041973 .. 4041995 - -14.9  -3.98952   GAAAACAAAGTGAAA           CGGCAGTGC CTCAT GCACTGCCG           AAATATCTGGTGACA 100 54
 CHQ57_18675 4041539 .. 4041569 -    -2  -3.17212   TGACCAGTTCAGGAA       TCTACCTCCATTTT TTC AAAATGAAAACAAA       TGTACAGGAAAAACG  43 41
        srlR 4040525 .. 4040542 - -14.1  -4.45544   CCGGAGCAATGAAAA             GGGGCGC TTCA GCGCCCC              TTTTACTTTCCGGAA 100 215
 CHQ57_18635 4032859 .. 4032873 -  -4.2  -2.52464   GGTCGGCCGAACTCA               GCGC CCCAGCT GCGC               CGAAATGCGATCGCA  42 8
 CHQ57_18630 4032549 .. 4032564 -  -8.2  -5.76949   GATCGCGAAAAAAAA              CCGGCC AATG GGCCAG               TTGTGTCATTTTATG 100 55
 CHQ57_18625 4032039 .. 4032064 - -19.1  -3.15249   GAGACCCCTGACGAA         GAGAGGAGGCC CCGG GGCCTCCTCTC          TTTATTGATTGCTAT 100 91
 CHQ57_18610 4029058 .. 4029076 - -10.2  -3.05384   GGCGCCCCGATGCAA             GCCCTGTC AGG GACCGGGC             CCCCAATCTGTGATC  69 81
 CHQ57_18605 4028115 .. 4028147 -   -12  -5.10163   AATGCGAAAAGAAAA      GGCCATCCGGGC TATTTCCCG GCCTGGATGGCC      CCTTTCCTCTGGCCA 100 48
 CHQ57_18595 4026365 .. 4026396 - -14.6  -4.59109   TATAGTGCCGAAAAA      TAAAAACCGGAGCA TTTT TGCTCCGGTTTTGA       CTGTCATGGACTCGC 100 50
 CHQ57_18590 4024856 .. 4024882 -   -10  -4.11394   AGGTCAGGTTGAAAA         GTGGGAGGGGCA TGC TGCCCCCCCATC         AAAATCGAACCTCAC  80 37
 CHQ57_18580 4022442 .. 4022459 -  -9.8  -2.52464   TCCCCGCCCAACTGA             GCCCGG TGATGG CCGGGC              TGGCGGACCTCGCAA  65 50
 CHQ57_18550 4015088 .. 4015105 -  -2.7  -2.84574   CAGGGGAAGCAACCA             GTTCAGA TCCA TCTCAAC              CTCTTGGTGATACAA  42 135
 CHQ57_18545 4014411 .. 4014424 -  -9.5  -5.38047   CAGCGAGATAAAAAA               GGCCC CGAA GGGCC                AACAAGACAGAAGGT 100 110
 CHQ57_18540 4013557 .. 4013583 - -10.8  -2.70932   CCTTGCGTGTAAGGA         GTCGCGGCCAAC CGA GTTGGCCGGGAA         ATTCAGGGCGCAATT  70 98
 CHQ57_18535 4012385 .. 4012402 - -12.7   -4.7173   GACCAGACGCAAAAA             CGGGAGC ATCT GCTCCCG              TTTTTTTCACACAAC 100 50
 CHQ57_18530 4011506 .. 4011523 -  -2.5  -2.80344   GTGTCATCCAACAAT             GGATGGG ATTC CCCTGCC              GGGGGCTTATGGTCG  39 156
 CHQ57_18525 4010203 .. 4010234 - -14.4  -3.60792   GCCGGAAGCCTGAAA      CGACAACGCCCGGC ACAG GCCGGGCGTTGTAT       CGGAGCAAGGGGCGT 100 40
 CHQ57_18520 NONE
 CHQ57_18515 4007719 .. 4007739 - -16.1  -5.78622   TGAGCGTAAAAAAAA            GCCCCGACC AGA GGCCGGGGC            TTGAGACGATGAACA 100 47
        putP 4005911 .. 4005927 - -15.1   -4.8048   GCCGCACATGAAAAA              GCCCCGC ATC GCGGGGC              TTTTTGTTATTGGCG 100 50
 CHQ57_18475 3998876 .. 3998904 -  -5.9  -3.37464   TTATGAAGGCCAGAA        CCTCAGCCTCTTC ACC AAAGGGGACGAGG        CCAGCCTGGAGCGTT  52 129
 CHQ57_18445 3993888 .. 3993903 - -10.4  -4.82667   TCACCACACCAAAAA              GGGCTC CACG GAGCCC               TTTTTCATGAAGTGA 100 50
        cobA NONE
 CHQ57_18425 NONE
 CHQ57_18420 NONE
 CHQ57_18415 NONE
        cysC 3985976 .. 3986005 - -15.9  -2.78935   ATAGTTTGCAGGATA       TAAACAAAGGGGC AAAC GCCCCCTTGTTTA        TCAATATTCGGTGCG  95 52
 CHQ57_18395 3983616 .. 3983631 -  -5.4  -3.14294   AAGAGGGACAGCCAA              CGGTAA CCGT TCACCG               GGAGGATGTTGACAA  52 20
 CHQ57_18340 3973325 .. 3973358 - -14.6  -2.69964   TGGCCAAGGATACTA     CCGTGAGGACGCCA CTTGTC CGGCCTCCTCACGG      TCGCTCATCTTGCTT  90 325
 CHQ57_18335 3972374 .. 3972387 -  -2.3  -2.81464   GGATGACTCACGACA               GCAGG GCGT CCTGG                AATACGCCACGGGCC  39 4
 CHQ57_18330 3971271 .. 3971281 -    -4  -3.06501   TATATTTTCAGGTAA                 TGTT AAA AACA                 GTAACCTTGCGCCCG  46 50
         pgk 3970045 .. 3970074 - -15.7   -4.0162   CGGCCACATGATAAA       CGAAACGGGAGGC TTTT GCCCCCCGTCCCG        GGTCAATTAGGCTTT 100 32
 CHQ57_18320 3968839 .. 3968856 - -10.5  -4.84918   CCCACAAATACAAAA             GGCGCCC CGAG AGGCGCC              TTTGCATGCAATCAA 100 55
 CHQ57_18315 3967247 .. 3967260 -  -6.7  -3.14344   CAGGTGCTGCAGCAA               CAGAC CGAC GTCTG                GATGATGAAAACCGA  54 117
 CHQ57_18290 3963633 .. 3963663 - -14.1  -2.74371   AAGCGGGGAACACTA       GGCACCATCATGC AACTG GCATGATGGTGCT       GGAGGAAGACAAGCC  85 61
 CHQ57_18280 3962087 .. 3962099 -  -9.1  -2.70932   TTTTCGTTTCAAGCA                GGAGG AGG CCTCC                AGCCTTGCTCTGCAA  57 74
 CHQ57_18270 3960834 .. 3960845 -  -7.2  -3.65351   TGACGGGCATGTAAA                CCCG CATA CGGG                 ATCAGCTCAGGCTAT  63 27
 CHQ57_18265 3960052 .. 3960071 - -11.4  -4.24342   GTGCGTACCAACAAA            CGCCTGGC CCGT GCCAAGCG             CCGTATCGACATGCT  89 405
        rpoE NONE
 CHQ57_18250 NONE
 CHQ57_18245 3956265 .. 3956295 -    -4  -2.75074   CCCATCTGAACATGA      CTG-ACCCGCTCG GGCAAG CGAGCATGTGCAG       GCGACTACTGTACAG  43 30
 CHQ57_18240 NONE
 CHQ57_18235 NONE
        lepB NONE
 CHQ57_18225 NONE
 CHQ57_18220 3951276 .. 3951295 -  -3.6  -3.18264   GGCTGGACTCAGCAA            TCAGTCAT CGCC ATAACCGA             GACTGCGCAGAGCGC  47 6
        recO NONE
 CHQ57_18210 3949705 .. 3949735 - -13.5  -3.89614   CCTAAGCGCCAGAAA      TGATAAAGGGACGC CGCG GCGTCCCTTT-TCA       TCTCTCATCAACCCG 100 47
        rumA 3943761 .. 3943780 -  -5.1  -2.53213   GAACTTTTCAAGGCA            TATTGTC AATAAA GACAATA             GAGTTCTCCAACAGG  47 144
 CHQ57_18185 3941404 .. 3941431 -   -20  -4.32034   TGATCAGGAGGAAAA        CAGTGACCGACC TTGC GGTCGGTCACTG         CTGCGGGCGGGTCAC 100 43
 CHQ57_18180 NONE
        pyrG 3938737 .. 3938763 - -11.5  -5.46629   AATATGCCAAAAAAA         GCGGCTGTGGC ACAGA GCCTCAACCGC         ATTTATTTTCAATTA 100 38
 CHQ57_18170 3937337 .. 3937357 - -18.3  -4.84527   GCCAGATACGAAAAA            GCCCCGCCA GAT TGGCGGGGC            TTTGAGCAGATTAAG 100 53
 CHQ57_18165 NONE
 CHQ57_18160 NONE
 CHQ57_18155 NONE
 CHQ57_18150 NONE
 CHQ57_18145 3933808 .. 3933823 -  -3.2  -2.82516   CGCTGTACTATCACA              CCTTCA TCCC TGCAGG               TCTAACCAAGCCCCC  41 13
 CHQ57_18140 NONE
 CHQ57_18135 NONE
 CHQ57_18130 3931541 .. 3931558 -  -2.7  -2.53233   GAACCAGAGTAAGAC             TTAACTC TCTG GGGTTAA              CGCTTTGGCAAATAG  40 22
 CHQ57_18125 NONE
 CHQ57_18120 3928925 .. 3928945 - -16.9  -3.33696   TCCGGTTGCAATGAA            GAAGGGGCC CAT GGCCCCTTC            TTCATTTCTATCAGC 100 134
 CHQ57_18110 NONE
 CHQ57_18105 3926979 .. 3927004 - -11.9  -5.86976   GTAGAAAATAAAAAA         GCCGCGCATTCC CAG GGAA-GCACGGC         TTCTTCGACCAAACA 100 54
 CHQ57_18100 3925010 .. 3925034 -  -7.1   -4.6821   AATTCTAATAGAAAA          CCGCCAGACAT GCT ATGTCTGGTTG          CGGCGTCGGTCGTGA  81 148
 CHQ57_18095 3923027 .. 3923043 - -15.1  -4.87892   CCCGAATAAAACAAA              GCCCCGC ATG GCGGGGC              TTTTGAGACGGCAAC 100 60
 CHQ57_18090 3922770 .. 3922797 - -16.4  -4.53034   GCTAGATAAGCAAAA        GGCGCAGC-GGTT ACT AACCTGCTGCGCC        TTGCTGAATTTGGTG 100 36
 CHQ57_18010 NONE
 CHQ57_18005 3905395 .. 3905423 -  -8.1  -4.62069   GGCCCAGGTCAAAAA        CGCAGCGATTTTG TCA CCAAATCGCCGCC        GTCACAATGGCATCC  84 52
 CHQ57_18000 3905023 .. 3905051 - -17.5  -4.36914   GTTTTCTCCATAAAA        CAATCAGGGCGCC ATT GGTGCCCTGATTG        TTTTGAATCCTGCCG 100 56
 CHQ57_17985 3901586 .. 3901606 -   -14  -4.40561   CGCCTGCAAAAAGAA            CAGGGGGC TCATG GCCCCCTG            AGTGTGCCCATCAGA 100 50
 CHQ57_17980 3900401 .. 3900428 -  -4.2  -4.31433   GATTCGTATAATAAA        CCACCAA-GAATG GCA CATTCACTGGCAG        CAAGTGGTGATTGCA  65 71
 CHQ57_17975 3899872 .. 3899897 - -19.1  -5.28778   ATCACGCATAAAAAA         CGGGCCCAAAG TTAC CTTTGGGCCCG          TCTTCAGATGAGGTG 100 46
 CHQ57_17950 3896208 .. 3896227 -   -15  -2.71712   GCTGGTCGGGCAAAT            GCGCCGGA CAAG TCCGGCGC             CAAACACTCGATCAC  77 52
 CHQ57_17920 3888286 .. 3888311 -  -6.7  -4.09685   CTTCATCTCGCAAAA         CTGCGGGGCTGG CAA CCCGGCCCGC-G         CCAGGGCCGCACTGC  68 463
       groES NONE
        groL 3885129 .. 3885148 - -12.8  -5.93809   TCGCCATAAAAAAAA            CGGCCCGC AAAA GCGAGCCG             TTTGGTAACCAGGAC 100 45
 CHQ57_17900 3884512 .. 3884553 -  -2.4  -3.71873   GGATGGATAGGTAAA GAACGACAAGTAAAGGCCA CGCCT TGGTCTTTGCTT-TCACTC GCACTCCCGCACGCC  51 47
 CHQ57_17895 3882586 .. 3882603 -  -2.7  -2.73875   CCTGCCCTAAGACTA             TCGGC-CA TCT TGCGCCAA             ACATGAACTGTTTTG  41 42
 CHQ57_17890 3882331 .. 3882366 - -17.8  -2.93747   AGCAAATCGCAGATA    TAAAAAAGCCCCCATC GCGA GATGGGGGCTCTTTCA     TTAGGGTCAGACGCG 100 32
 CHQ57_17875 3876221 .. 3876233 -  -3.3   -4.1721   ATTCACATCCCAAAA                CCCAA TGA TAGGG                CTTCTCTCATCTGAC  60 137
 CHQ57_17870 3875998 .. 3876025 - -12.2  -4.65747   CAAGGCCGAAGAAAA        CAGACATAAACA CGCA TGCTTATGTCTG         CATTCTTGTTAGCAA 100 50
 CHQ57_17865 NONE
         rrf 3872650 .. 3872668 -   -16   -5.4833   TTAGGCAATAAAAAA             CCCCGCTC GAT GAGCGGGG             TTTCTTGTATTGGGT 100 41
 CHQ57_17855 3871729 .. 3871754 - -11.9  -3.27022   TGCAGTGCAGATGAA         GGCGTATTCCA GCAA TGGGATACGCC          TTTTTCTATGGCTGC  77 44
 CHQ57_17850 3870247 .. 3870273 - -10.2  -5.40474   AGGCTGGGAAAAAAA         TGGAGGGTACAC TTG ATGTAACCTCCA         TACGCACAATCTAAA 100 74
 CHQ57_17845 NONE
 CHQ57_17840 3868110 .. 3868124 -  -2.8  -4.52857   ATGGCGTAGAGAAAA               CCTG GACCGGT CAGG               GCCGTACACCCAAGT  66 223
 CHQ57_17825 3866071 .. 3866081 -  -3.2  -3.74397   ATTCCGATAAAAAAG                 TAGC GCT GCCA                 GCCTCCACCATTCGC  53 230
 CHQ57_17815 3865202 .. 3865247 -  -3.6  -4.81163   GAAACAGCAATAAAA TACCTAATAAAATCAATA TATTATATCT TGTTGATTTTATTGGGTA TTTTATATCTATCTG  73 224
 CHQ57_17805 NONE
 CHQ57_17800 3862903 .. 3862921 -  -4.4  -2.71483   AGACCCGGTCAATCA             GGTTGCCC ATG GCGCCACC             GAGGATAAGACTGTA  46 171
 CHQ57_17790 3861261 .. 3861276 -  -5.4  -3.35679   GTTGCTGATGGACAA              CGCAAC TTCG GTTGCA               GTCAAGTACGATAAG  54 159
 CHQ57_17765 3855570 .. 3855589 -  -4.9  -4.86621   ATCTCCAATGAAAAA            GGGGCTG GCAAAG CAGCTCC             AGAGGTAGGTTCATA  75 457
 CHQ57_17760 3854524 .. 3854558 -  -3.3  -3.87815   TGTCAGCGGCATAAA    CGTCCCC-GCCCGGCC TGAT GGCTGGGTAGGGGTCT     ATGACGGGTAAATGA  55 62
 CHQ57_17755 NONE
 CHQ57_17750 3852139 .. 3852153 -  -8.6  -3.21994   GAAAAAGATCTAATA               GGTTGA TAT TCAACC               CTACAGGTCCTTCAT  63 434
 CHQ57_17740 3851753 .. 3851779 -  -2.3  -2.56343   ACCTTAATTATTAAT        CCTTGACGCATA AGCA TGTGCATCA-GG         TGAACGCTATGTCAG  38 37
 CHQ57_17735 3851513 .. 3851531 -  -7.4  -4.96501   GGCCATAAAAAGAAA             GGGCATCA TGA CGATACCC             TGTGATGTTATATCT  90 33
 CHQ57_17730 3850757 .. 3850790 - -12.6  -4.87665   GGTCAGGCATAAAAA     CGA-AACAGGGCACC TTGTG GGTGCCCTGTTATCA     GTGTGGAAAAGTGAC 100 45
 CHQ57_17725 NONE
 CHQ57_17720 NONE
 CHQ57_17715 NONE
 CHQ57_17710 3848938 .. 3848964 -  -4.3  -5.18866   TCCAAATAAACAAAA         CCCCGGCACAC ATAAA GCATGTCAGGG         TTAAAGGTAGAGCGG  87 65
 CHQ57_17705 NONE
 CHQ57_17700 NONE
 CHQ57_17695 3847774 .. 3847795 - -11.6  -4.35524   CCTTGAAATGCAAAA           GGCCACCT GCAGTG AGGTGGCC            CAGTGGGTAGTGTTG  95 95
 CHQ57_17690 NONE
 CHQ57_17685 NONE
 CHQ57_17680 3846626 .. 3846648 - -14.9  -3.92659   TCCTTAAAATGCAAA           CAGCCCCTC GGCGT GAGGGGCTG           TATGGGCTCTTGTGT 100 58
 CHQ57_17675 NONE
 CHQ57_17670 3845641 .. 3845664 - -15.3  -3.71527   CTCCAATGATGCAAA          GGGCCAGCC TGTGAT GGCTGGCCC           TTTATGTTGTTTGTT 100 62
 CHQ57_17665 NONE
 CHQ57_17660 3844806 .. 3844830 -   -10  -5.13354   CGGACAAAAAACAAA          GGGAAGGCTA TGAAT TGGCCTTCCC          CACGACCTATCCCAT 100 90
 CHQ57_17655 NONE
 CHQ57_17650 3840847 .. 3840867 -  -5.3  -2.75382   CAGGTTAGGCAACGA            GTCGAGCGG GAA CTGCTCGAT            AAACTGGCGATAGAT  48 456
 CHQ57_17645 3838828 .. 3838848 -  -5.3  -3.20382   GCCCATACTCACGAA            CCGTGATGG GAG CCTTCACTG            CGCCCCCTTGTCACC  52 20
 CHQ57_17640 3837512 .. 3837524 -  -6.9  -4.14859   ATCAACAAGGAGAAA                CGCCC GTC AGGCG                GGCTCGGTGGGCCTC  70 19
 CHQ57_17635 3834352 .. 3834374 -  -6.4  -4.59511   AACACTTTTTAAAAA           TGTTCATTTC TGA AAAACGAACA           CCCATTTATCCTCAA  77 37
 CHQ57_17630 NONE
 CHQ57_17625 NONE
 CHQ57_17615 3831037 .. 3831076 -    -3  -2.88544   CTTGACTCGCATATA  TTCATGCATCGGTTG-CTT TCG ATGACAATCAATGCATAAA  GCTTTTAGATTGGCA  42 135
 CHQ57_17610 3830534 .. 3830559 -  -9.1  -4.68908   GCTATTGAAAACAAA         GGTACTTTCAT TTTA ATGAAAGTGCC          TTTTTAGTTTTGAAC  91 170
 CHQ57_17595 NONE
 CHQ57_17590 NONE
 CHQ57_17585 NONE
 CHQ57_17580 3824178 .. 3824197 - -13.6  -5.28481   CAGCCAATTAAAAAA            CGGTCAGC CTCA GCTGACCG             TTTCCATATCCGGCA 100 45
 CHQ57_17560 NONE
 CHQ57_17555 NONE
 CHQ57_17550 3818338 .. 3818352 -  -2.1  -3.13522   ACGTGTGCACCAAGA               CGTCA ATTTA TGACA               ATCATTCCCATTTCT  43 27
 CHQ57_17545 3817230 .. 3817264 - -30.2  -4.15565   GTCAGGATTGTAAAA     GACAAACGGGGCGCCC ACT GGGCGCCCCGTTTGTC     TTTGTCTGCCACAAA 100 48
        cysQ 3813282 .. 3813300 -   -16   -4.4267   GGCGAAAACGCAAAA             GGCCGGAC AGT GTCCGGCC             TTTTCACATCTGTGT 100 61
 CHQ57_17505 3809829 .. 3809840 -  -2.2  -2.83522   AGCTTGTCAGCAAAC                GCTG ATGC CAAC                 TGTGTGATACCGCAC  39 84
 CHQ57_17500 3807608 .. 3807622 -  -2.8  -4.07568   TGGCTTGTTGCAAAA               CCGATA TCT CATCAG               GAGTGCCAGTGGCCA  57 523
 CHQ57_17485 3794111 .. 3794166 -  -8.5  -3.91674   TGCATAGAGAAAACA GAC-TACCCGCTC-CCGGAAGAGTTGTT GTC AACATC-CTCCCGGTGAACGGTTACGTC GCCTCGAAGGTCACC  74 19
 CHQ57_17475 3784773 .. 3784792 - -13.6  -5.76633   CCAGACATAAAAAAA            GCGGCAGA TTGC TCTGCCGC             TTTTTACTGACTTCA 100 48
 CHQ57_17470 3783504 .. 3783531 - -18.6  -4.07568   CCTGTCGGCCCAAAA        CAAAGATCCCGC CGAA GCGGGATCTTTG         TTTCCATGACCATCA 100 38
 CHQ57_17460 NONE
 CHQ57_17455 3779593 .. 3779645 - -27.4  -2.73875   GTTCCGGCAAGATGA TTGC-CGAAAATGACAAGCCCGGCC ATGT GGCCGGGCTTGTCATTTTTGCGCAA AAAGCAAGAGACTAG 100 37
 CHQ57_17445 3776753 .. 3776776 -   -11  -5.47159   CTGAATAAAGAAAAA          CCAGCGATCT GTCC AGGTCGCTGG           TTTTTTATTTCCTCG 100 61
 CHQ57_17430 NONE
 CHQ57_17425 3772799 .. 3772815 - -13.7  -4.87665   CCCCACTGACAAAAA              TCCCGCC AAT GGCGGGA              TTTGTCTATGTACCC 100 87
 CHQ57_17420 NONE
 CHQ57_17415 3770466 .. 3770485 -   -15  -4.80882   AGCGCATATGAAAAA            GGCCGGAC ATCT GTCCGGCC             TCTTGTTACTGCCTG 100 42
 CHQ57_17410 3770053 .. 3770078 - -14.8   -4.1337   TGACACGAGAAACAA         CAAGGGCTGC TCGCGG GCAGCCCTTG          TTCTTTGGTGGAGCC 100 41
 CHQ57_17395 3763987 .. 3763997 -  -2.4  -2.60802   AAAGACATGAATTCA                 CTCC GCT GGGG                 TCAGTCGTTGCTGGA  38 12
 CHQ57_17390 NONE
        betA 3760822 .. 3760835 -  -3.7  -3.37344   TTTTTATTCAACCAA               CGGGC TCAA GCCAG                GGAACGCACCGGCTC  49 17
 CHQ57_17380 3759233 .. 3759243 -  -3.2  -3.83771   AATAAATTCATCAAA                 GAGA CCC TCCC                 TGTCCCGTTTCATGA  53 148
 CHQ57_17375 3758949 .. 3758967 -   -16  -3.12936   AGCCAAATTTGAAGA             GCCCGCTC ATA GAGCGGGC             TTTTTTTATGCCTGT 100 42
 CHQ57_17355 3755487 .. 3755504 - -11.3  -4.83243   CGCAGACAAAACAAA             GGCCACT CGAA AGTGGCC              TTTTTGTTGTCCGGC 100 66
 CHQ57_17345 3752759 .. 3752790 - -13.8  -4.65895   CTGGCCACCCAAAAA      CAAACACCCCGCTG CAAG CAAGGGGGTGTTTG       ATGCTGGCCACCATA 100 66
 CHQ57_17315 3748899 .. 3748909 -  -5.4  -2.87564   CTATTCCCGCACACA                 CCAT AAA ATGG                 CATCAAAACAAATCG  49 199
 CHQ57_17310 NONE
 CHQ57_17305 3748660 .. 3748676 -    -3  -2.56596   TGCTCTACCAACTGA              GCTATT CCCGC AACAGC              GTTGTCATTGTCTGG  40 55
 CHQ57_17300 NONE
 CHQ57_17295 NONE
 CHQ57_17290 NONE
 CHQ57_17285 NONE
 CHQ57_17280 3747982 .. 3748000 -   -11  -4.25347   AAGCAGGAACACAAA             CGCATCGC AGC GCGATACG             AAAGTCATTTTTGAA  91 195
 CHQ57_17260 NONE
 CHQ57_17255 3742465 .. 3742482 -  -9.1  -4.86385   ACCGCGAAAAACAAA             GGCTCCC TTGC AGGAGCC              CTTTATTGTCAGTGG  95 84
 CHQ57_17250 NONE
 CHQ57_17245 3742023 .. 3742036 -  -2.3  -2.61582   CAGCTGAGCTATAAC               CCCAC AAAG GTCGG                CCTGGGTGATACACA  38 79
 CHQ57_17240 NONE
 CHQ57_17235 NONE
 CHQ57_17230 3741650 .. 3741683 - -16.1  -4.23723   CAACATGAGCCAAAA     CAAAAAGGCCACCGC GATA ACGGTGGCCTTTTGG      CTTCTTGTCACAAGA 100 44
 CHQ57_17220 3735800 .. 3735819 - -13.6  -5.24129   TGCCGTCATAAAAAA            TCCGGAGC CTGG GCTCCGGA             TTGGGTCATTCATGG 100 96
 CHQ57_17180 3725996 .. 3726009 -  -3.1  -2.99947   CAAGGGCCACACAGA               TATCG GAAA CGACA                TGGCGTGATATCAGC  43 72
 CHQ57_17175 NONE
 CHQ57_17170 NONE
 CHQ57_17165 NONE
 CHQ57_17160 3720744 .. 3720761 - -12.7  -3.20227   CTCCAACCATGAAGA             TGGGGCC CACA GGCCCCA              TTTTTTTATTGCTTC  81 78
 CHQ57_17145 3717780 .. 3717804 -  -7.8  -4.64763   TTACTTAAAAAATAA         TC-GCCTCGCG TTCA CGCGCGGCTGA          GTCAATGCTGGCGCC  84 403
 CHQ57_17135 3717235 .. 3717257 - -14.9  -5.69473   TACACCACAAAAAAA           CAGGGCTCC GGATG GGAGCCCTG           TGTGGTGATTACTCT 100 34
 CHQ57_17130 3715852 .. 3715867 -  -5.4   -2.6563   CTGTTGAACAAGCCA              CATCAC CTGG GTGACG               TTATGTTTTTAGCGC  47 45
 CHQ57_17125 3715390 .. 3715427 -   -10  -4.08064   AAGCCGTGTGGAAAA   GATGGCCCTGCGAGT GAATGGACA ACTCGCAGGGC-ACC   AGATCATCAGGCGGC  83 32
 CHQ57_17120 NONE
 CHQ57_17115 3712713 .. 3712730 - -11.3  -5.02201   AAAACAGCACAAAAA             TGCCGAC CATG GTCGGCA              TCATGCAATGCGCTC 100 52
 CHQ57_17110 3711923 .. 3711947 - -17.3  -2.66899   CGCCAATCAACGAAC          TAAGGCCAGCA CTC TGCTGGCCTTA          TCTCTTTCAGAAACG 100 44
 CHQ57_17100 3710437 .. 3710482 -  -4.5  -3.14564   CCAGGGCTGCATGAA CCTGGCCGCCTCGGTCAATGTG ATC CTCTATGACCG-GCTGGCCAAG CGCCTGAGGGCCGGG  48 67
 CHQ57_17090 3706957 .. 3706973 -  -2.3  -2.78384   CCGGCCCCTACCAGA              CTGAT TTGGCTC ATCAG              AGACTCCTTGTGTTG  39 53
        cobA NONE
 CHQ57_17080 3705284 .. 3705310 -   -21  -6.15828   GCGACCAAAAAAAAA         GCCTCACCGATC CGG GATCGGTGAGGC         CTCTTTGCCCTGTTG 100 214
 CHQ57_17075 NONE
 CHQ57_17070 3702884 .. 3702894 -  -4.6  -2.57092   AATGTGATTAACGCA                 GCAC CTG GCGC                 TTGTCCCAGGACAAC  45 7
 CHQ57_17065 NONE
 CHQ57_17060 NONE
        nirD 3698889 .. 3698918 - -12.9  -3.71848   TCGGGTCAGCAACAA       GAACATCACCGGG CAAG CCCGGTGATCCTC        AATGGGATATGCACA 100 47
 CHQ57_17050 NONE
 CHQ57_17045 3696513 .. 3696530 - -12.7  -4.78848   CGCCGAAATAGAAAA             GAGGGCC AAGG GGCCCTC              TTTTTCATTCACCGC 100 155
 CHQ57_17035 3694286 .. 3694303 - -14.1  -4.76041   TAGAGCCATGAAAAA             GCGGGGC CTCT GCCCCGC              CTGGATTCAAACTCA 100 49
 CHQ57_17030 3693281 .. 3693311 - -16.3  -2.74012   TGACGACCTGAACGA      CTGACAACAGGGGC CCAG GCCCCTGTTGTC-G       TTACCGCGAGTCAGT 100 36
 CHQ57_17010 NONE
 CHQ57_17005 NONE
 CHQ57_17000 NONE
 CHQ57_16995 NONE
 CHQ57_16990 NONE
 CHQ57_16985 NONE
 CHQ57_16980 NONE
 CHQ57_16975 NONE
 CHQ57_16970 NONE
 CHQ57_16965 NONE
 CHQ57_16960 3682499 .. 3682511 -  -4.8  -3.53091   ATTCTCCCGGCCAAA                CCAC GGGCA GTGG                CAGGGCGCGATGCGG  53 43
 CHQ57_16955 NONE
 CHQ57_16950 NONE
 CHQ57_16945 NONE
 CHQ57_16940 NONE
 CHQ57_16935 NONE
 CHQ57_16930 3675766 .. 3675788 - -10.6  -2.72977   ATGGTACAGACATTA           TGCCTCCC TAAAAAT GGGAGGCA           TCTTAATTCATCAAG  70 91
 CHQ57_16925 3675316 .. 3675342 - -16.6  -3.84931   CAAGAAATAGGTAAA         TGGACGGGGGAT GTG AACCCCCGTCCA         TCTCTTATTTGCGGC 100 30
 CHQ57_16915 3673951 .. 3673979 - -12.5  -3.65294   CTCCAGATAAATTAA        CGTCACCAAGCGA GCC TCACCTGGTAACG        AATATAATATCTAAA  88 73
 CHQ57_16910 NONE
 CHQ57_16905 NONE
 CHQ57_16900 3671837 .. 3671861 - -15.7  -4.90266   TGCAGCAAGGAAAAA          GGCCCCTTGTG CAG CACAGGGGGCC          TTTCATTTTCAACGG 100 54
 CHQ57_16895 3670183 .. 3670199 -  -5.1  -2.89117   AGCAGACGATGAAAG              GGTTTGA TAT TCATACC              GGGGTACTCCTGTCC  49 19
 CHQ57_16890 NONE
 CHQ57_16885 3667981 .. 3668002 - -18.7  -5.55769   TCTGACAATAAAAAA           GCGCCCGGC AACT GCCGGGCGC            TTTTATGGATGATAT 100 73
 CHQ57_16865 3662601 .. 3662620 - -16.4  -3.91911   TCGATGGCAACGAAA            CGCCCCGC AACT GCGGGGCG             TTTTTTATGGCGAAC 100 64
 CHQ57_16850 3657704 .. 3657739 - -20.6  -4.58466   GGGACAACCACAAAA    TAAAAGCCCCGCACTC GGCC GAGTGCGGGGCTTTTT     CATGGCGGTCTCTGC 100 59
 CHQ57_16845 3656157 .. 3656183 -  -2.2  -2.78216   CATGGGCAGCAACTA        TGACGCGGCCG TGCTGG CGGCAG-GCCA         CTGCGGCTTCGGCCT  39 264
 CHQ57_16835 3653508 .. 3653532 - -20.1   -3.8766   GCACACCATAGCAAA          GAGGGGAGCCA TAA TGGCTCCCCTC          TCTTTTCCTCTCCCC 100 200
 CHQ57_16820 NONE
 CHQ57_16815 3650055 .. 3650066 -  -7.2  -5.45652   ACTCGCAATAAAAAA                CGCC TTCG GGCG                 TTTTTTTTGCATCTG  95 57
        fadH 3645882 .. 3645898 - -12.3  -4.81852   GCACAATGAAGAAAA              CCCCTGA GGC TCAGGGG              TTTATCGCAATATCA 100 68
 CHQ57_16800 3645233 .. 3645250 - -11.3   -5.1861   GGCATGATCAAAAAA             GCCCTGA CAAG TCAGGGC              TTTGGCTGAAATTCA 100 47
 CHQ57_16795 3643389 .. 3643408 -   -10  -2.57211   ACGTTTCTGGACAAC            GCACCGAT CAGC ATCGGCGC             CAACGTCATGATAGG  60 334
 CHQ57_16755 3634268 .. 3634296 -  -7.3  -3.25015   CTCAACGACCATCAA        CTGGTACTGGTGC TGG GCCCCAACGCCAG        CCTGATCGAGGGGCA  54 125
 CHQ57_16715 3625700 .. 3625724 -  -6.3  -3.93383   TCAAGATAGATCAAA          CCTTCGTGCAG GCT CTGCCCGATGA          CAAGCACAGTCGGGA  62 282
        glyA 3617939 .. 3617962 - -15.4  -5.56264   CCGAAACAGAAAAAA          CAATGCCACC CGCA GGTGGCATTG           GTCTCAAACCAGCAT 100 51
 CHQ57_16670 3617406 .. 3617424 -  -6.7  -5.47218   CTCCAGCTAAAAAAA             TACCGCC AGCAA GGCGATA             TTCAACCCTTCAGTC 100 51
 CHQ57_16665 3616937 .. 3616968 -  -7.2  -4.15044   TCCGGCGTTAACAAA      CAGGGCACCTGCCCC ACA GGGGCAGG-ATCTTG      GCGGGCCAGTGTAGC  72 107
        nrdR 3616392 .. 3616402 -  -2.4  -2.66873   ATCTTGACTAAACAT                 CTGG GCT CCCG                 TTCAAAGCGAGAAAA  38 89
        ribD 3615282 .. 3615295 -  -2.3  -4.17425   ATAACGATTGGAAAA               TCAGG CTAT CCTGG                CGGTGATGCGGATAT  58 12
 CHQ57_16650 NONE
        ribB 3613270 .. 3613294 - -13.6   -4.9218   GACCCACGACAAAAA          CCATGGCCGC AACGG GCGGCCATGA          TCGCAATGTCATTCG 100 51
 CHQ57_16640 NONE
        nusB 3612199 .. 3612216 -  -8.4  -5.10461   CCCATGCAATAAAAA             GCCAGC GGTTAG GCTGGC              TCCTCTCTTCAAAGC  93 99
 CHQ57_16625 3610701 .. 3610726 - -10.5  -2.89935   AAACAGTGGTATATA         GGGGAATG-CCA GCG TGGTCATCCCCC         TGACAGGGCAATTCA  71 38
 CHQ57_16620 3608486 .. 3608497 -  -7.2   -4.1399   TTATTGACAGACAAA                CCGG CGAA CCGG                 TGCTTTCCTAGCTTG  70 33
 CHQ57_16615 NONE
 CHQ57_16610 NONE
 CHQ57_16605 3604824 .. 3604847 - -18.2  -4.51743   TGACGAGCAAATAAA          GAAGGGCGCC TGAT GGCGCCCTTC           TTGTATTTTCACTTC 100 50
 CHQ57_16585 NONE
        motB NONE
 CHQ57_16575 3599220 .. 3599240 -  -4.7  -3.18118   GGATGGGAGAAGAGA            GTTGACC ATTGAGG GGCCAAC            ACATTGACGGTTTAT  49 317
 CHQ57_16570 3598448 .. 3598474 - -12.2  -4.07746   GCTTGAAAAAGAGAA         GCTGCGGCAATC AAA GAGAGCCGCAGC         TATCGGTTCGGATGG  95 346
 CHQ57_16560 3597900 .. 3597920 - -14.7  -4.32857   CCCGCTAAATACAAA            CAGGGGAGC CGA GCTCCCCCG            TTTCAGGCATCACCT 100 45
 CHQ57_16545 NONE
        hflB 3594141 .. 3594159 - -13.1  -5.38054   TTGCACAAAGAAAAA             CCCCGGG ACCAG CCCGGGG             TTTGCATCATTACAA 100 42
        folP NONE
 CHQ57_16530 3591876 .. 3591914 - -22.7  -3.62522   GAATCGTTTGAACAA  GATACAACCAGGGCGGCT AAAA AGCCGCCCTGGTTGT-TC   ATTAAAACGCCGATT 100 27
 CHQ57_16525 NONE
 CHQ57_16520 NONE
 CHQ57_16515 3590572 .. 3590585 -  -5.9   -3.2059   AGTGACTATAATACA               CCCGG TTAC CCGAG                TTCACTGCTTAATTG  54 39
 CHQ57_16510 3590342 .. 3590362 - -12.6  -5.24796   CGCACATAACAAAAA            GCCCCGAT GTCAA ATCGGGGC            TTGGCGCTTTACCCT 100 93
 CHQ57_16505 NONE
        nusA NONE
 CHQ57_16495 3585535 .. 3585550 - -11.8   -4.3739   TATCCTGCGATAAAA              GGGGGC CGCA GCCCCC               TATTTTGTCTAACTG  95 46
 CHQ57_16490 3585064 .. 3585080 -  -2.9  -2.73441   CACGACCCTTGAAAC              GGCGTCT ACG AGACATC              TCAGGCTTTATCCTC  41 26
 CHQ57_16485 3584052 .. 3584082 -  -2.5  -3.40522   AGGGCGGTATCATAA       TCGTCCCCGTCAC TTTTC GCAACGAGAAAGA       GGCGCAGCGGGAAAG  45 63
 CHQ57_16480 3583662 .. 3583681 - -13.6  -5.56673   ACGGACAATAAAAAA            GGGGAACC CTGA GGTTCCCC             TTTTTCGCGAAATCT 100 50
         pnp 3581360 .. 3581377 - -12.7  -5.37043   AGCGGACACAAAAAA             GCCGACC CTGA GGTCGGC              TCTTCACAGCGCAGC 100 45
 CHQ57_16470 3579623 .. 3579665 - -13.5  -2.64416   CACCTGCAGGAGAAC CTGACCCGCACCCTGCGC ACCTGCCA GCGCAGGGC-CGAGCCAG TGGTCATTGCCTACC  72 405
 CHQ57_16455 3577875 .. 3577904 - -19.5  -4.56597   GTGCCTGCTGAAAAA       TGAAAAAGCCGGG CATG CCCGGCTTTTTCA        TTGTGCAATTCGTCG 100 42
 CHQ57_16435 3572493 .. 3572516 -    -4   -4.4767   TTAGGCAGGATAAAA          TCAATAAAGA TGAC TCTTTATCAA           TGCGTCCAGTCTCTG  67 518
 CHQ57_16430 NONE
 CHQ57_16425 3570596 .. 3570614 -  -2.2  -3.18024   GGCCACCAGCAAAAT             GGTCGCCA TCA CGCCGCCC             CTTGCGGCGCCAGCG  43 15
 CHQ57_16420 3569296 .. 3569315 - -13.6  -4.71828   AGTGCATGAACAAAA            GGGAGACC CATG GGTCTCCC             TCTCTTCAGCAGGCT 100 31
 CHQ57_16415 3568076 .. 3568101 - -19.1  -4.16814   CGAGGACAGAAACAA         CAACGGCGACC ATAA GGTCGCCGTTG          TCATTACCGAGTCTC 100 59
        xerD 3562898 .. 3562921 -  -3.8  -5.40072   TGTGTTCGAAAAAAA          CCGCCC GGGTGAAGTAAA GGGCGG           TTTTTTGTTGTGTGA  86 60
 CHQ57_16380 NONE
        recJ 3559738 .. 3559757 -   -15  -4.77165   TCTCCGATAACAAAA            CGGCCACC CGAG GGTGGCCG             TTGTCATCAACGGAG 100 57
 CHQ57_16370 3558933 .. 3558978 - -21.9  -3.67597   TTGTGCAGGGAACAA CCCTGCCACGGCACCCTGACC AACA GGTCAGAGCGCACTGGCAGGG GCAACAAGGCGCGGC 100 115
        nqrE 3558266 .. 3558283 - -12.7   -4.4261   CGCTGAATAGCAAAA             CGGCCAC GCAA GTGGCCG              TTTTCACAGGCTGCG 100 44
 CHQ57_16265 3540347 .. 3540368 - -17.3  -4.75472   CGCACATTAACAAAA           GAGGCGCCC CATG GGGCGCCTC            TTGCCATTTCATTTC 100 56
        ubiF 3533046 .. 3533059 -  -3.1  -3.25491   AACGCACATCACCAA               GGC-TG TGC CATGCC               CTCAACCCGGTGCGG  45 42
 CHQ57_16230 3532152 .. 3532162 -  -8.2  -3.15147   GCCAACGAACAGACA                 GGGC ATG GCCC                 GGTATTACCCTATCC  63 104
 CHQ57_16225 3530654 .. 3530673 -  -4.8  -2.64616   TTCCCAGCCAGATGA            CGGGGCCG GATC CGGCCACC             TTCGACGTTGAGTGG  43 434
 CHQ57_16215 NONE
 CHQ57_16210 3528697 .. 3528710 -  -3.1  -3.39068   CGAGCTGAAGAAAAT               CGTGCC ACC GG-ACG               CCTATGCCCAGAGTG  47 459
 CHQ57_16200 3526445 .. 3526470 -  -2.5  -4.08706   CCTGCACTATACAAA         TG-GCCACCTGC CGC GCCAGTAGCGCA         AACAGCCTGACATTT  56 188
 CHQ57_16195 3525869 .. 3525884 - -11.8  -4.69664   CACATCATGCAAAAA              GGGGCC TGTT GGCCCC               TTCCTCTATTTGTCG 100 63
 CHQ57_16165 3519947 .. 3519959 -  -7.7  -2.70528   ATGATGGAGATACTA                CCTCT GGC AGAGG                TGCAGTGATTTAGCT  57 79
 CHQ57_16160 3519388 .. 3519400 -  -4.1  -3.39449   CCTGATTAATACCAA                TGACG ATC CATCA                ACACGGGATCATGAC  49 23
 CHQ57_16155 3517989 .. 3518012 - -16.8  -3.09831   CTGATCCGAAAACGA          CAACGCCTCC CGAG GGAGGCGTTG           TTCATGGATAGTTCG 100 85
 CHQ57_16115 3510409 .. 3510420 -  -5.8  -2.60002   GACCAAATGAAAACG                CCCT GCTC AGGG                 TTTGGTGAAGACGAC  50 20
 CHQ57_16110 NONE
 CHQ57_16105 3508255 .. 3508271 - -10.8    -3.767   GACTGATTGACCAAA              CCGGGC CAAGT GCCCGG              TTTTTTATGGCTCTC  84 39
 CHQ57_16065 3496854 .. 3496884 - -13.5  -4.41548   GCAGACCGGATAAAA      CAGAAAA-GGCAGC CAGG GCTGCCTTTTTCTG       TTTTGGGGATACCGC 100 41
 CHQ57_16050 3494073 .. 3494088 - -11.8   -4.1899   CGACGCCATGCAAAA              GGGGCC CGCA GGCCCC               TTTTCACTGTATATC  93 60
 CHQ57_16040 3492119 .. 3492136 - -14.1  -5.40072   GTCTGGCTAAAAAAA             CCGGGCC CCAG GGCCCGG              TAAAAACACAGGGAA 100 56
 CHQ57_16035 3491392 .. 3491406 -  -5.6  -4.34402   GCGGGTAGATGAAAA               GCGGCA TCT CGCCAC               CAAGCCCCCTGCTCA  70 70
 CHQ57_16030 3489528 .. 3489564 - -15.2   -4.7254   AGGCCTGACTAAAAA    CAGAGCGGGCCCGAAT ATGGG ATCCGGACCCGCTCCA    TGGATTGATGCCTCC 100 47
 CHQ57_16025 3488488 .. 3488505 - -14.1  -4.52047   CACCAGATGACAAAA             CCGGCGC CAAG GCGCCGG              TTTTCTTTTTCTACG 100 50
 CHQ57_16015 NONE
 CHQ57_16010 NONE
 CHQ57_16005 NONE
 CHQ57_16000 NONE
 CHQ57_15995 3480642 .. 3480666 -  -2.1  -4.20368   TTATCTCAATAGAAA          TCAGGACTG GCAACCG CAGCCCTTA          CGCCCCAGCATCATT  58 84
 CHQ57_15990 NONE
 CHQ57_15985 NONE
 CHQ57_15980 3477298 .. 3477316 -  -5.8  -4.72846   GCATAGACCCAAAAA             GGGGGACG ATT CTACCCCC             TTCTCAGGCCGAATG  77 42
 CHQ57_15975 3476363 .. 3476382 - -11.4  -2.90511   CAGGCAGAAACAGCA            GCGGCACC CGAA AGTGCCGC             CAGAGGATCAGCCGA  75 33
 CHQ57_15970 NONE
 CHQ57_15965 NONE
        trpS 3473652 .. 3473677 -  -6.1  -4.64861   GTCGGGTAAAACAAA         GAAAGCCAGGC AAGG ACCCAGCTCTC          TTCTACTACACCTTC  77 49
 CHQ57_15955 NONE
 CHQ57_15950 3472578 .. 3472598 -  -3.3  -2.56715   AAAAAAGCTAAAAGT            CTGCAAC AAAGCAA GTTACAG            GGAACAATGTTCGAT  40 186
 CHQ57_15945 3471217 .. 3471248 -  -5.6  -2.80816   CTTTCATTGACGACA      GGTGGGGTCCCGGC TCCT GCCGGGAGGGCTCC       CCACCTCAATTAGGA  48 41
        astA 3470109 .. 3470122 -  -8.1  -3.28712   CCCTGTGTTTCACAA               GCAGC CTTG GCTGC                CTGTTTCATATGCGG  62 72
        astD 3468495 .. 3468513 -  -8.1  -3.58726   TGCGGGTACAGACAA             GGGCACC TGTTC AGTGCCC             CTTTTATTTTTTGTT  66 127
 CHQ57_15930 3467631 .. 3467646 - -11.8  -5.28826   AAACGCCATAAAAAA              CGCCCC TTTC GGGGCG               TTTTTGCCAACCATC 100 45
 CHQ57_15920 3465281 .. 3465303 - -19.2  -4.33851   AAACCGGATAACAAA           GAGGGCTCCC GTT GGGAGCCCTC           TTCACATCCAGTCTG 100 48
 CHQ57_15860 3448908 .. 3448923 - -10.4  -5.09204   ACAGCCCAATAAAAA              GCGGCT CGCA AGCCGC               TTCTCTCTTTGCCCT 100 53
 CHQ57_15780 3439181 .. 3439202 -  -9.3  -3.18264   TTCTCGATGGAGGAA           GGGGCCGCC AGCT GGCCACCCC            GAACAATTACTCTTG  67 32
 CHQ57_15775 3438021 .. 3438036 -  -7.5  -3.15544   CTGGATCTGCATCAA              CGGCG CGCCAT CGCCG               TGACGGCGATATCTG  61 56
        prmC 3437122 .. 3437139 - -10.5  -4.15044   GTGTCCTTGAACAAA             GGCAGGC TCAG GCCCGCC              ATTCACCATCAATGA  91 34
 CHQ57_15765 NONE
 CHQ57_15760 NONE
 CHQ57_15755 3434704 .. 3434722 -   -16   -5.1356   TGCCAGTAATAAAAA             GGCCTCGC ATC GCGAGGCC             TTTTCCATATTTTCT 100 59
 CHQ57_15745 NONE
 CHQ57_15740 3432799 .. 3432809 -  -4.6  -3.48064   GCGACAAGCAAGCAA                 GGCC TCA GACC                 TCCCATTTACGCTCG  53 151
 CHQ57_15735 3432095 .. 3432121 - -22.4  -4.67234   AGCGAACTGTAAAAA         CAAGGCCCCGGT TCA ACCGGGGCCTTG         TTTTTGAGTACCTTG 100 44
 CHQ57_15725 3430405 .. 3430419 -  -8.6  -5.37043   ACCTGACATAAAAAA               CAGTCT TCA AGACTG               ACGGTTTTTTGAGGT 100 131
 CHQ57_15710 3425935 .. 3425963 - -17.5  -4.29396   AAGGATCCACCAAAA        CAGAAGGGGAGCC AAT GGCTCCCCTTCTT        CATCATCCCATGTTG 100 54
 CHQ57_15690 3420410 .. 3420426 -  -6.5  -2.78463   ATCCCCCTCACGAGA              GGGCC TCTCTCT GGCCC              TCTCGTCCTTGTCAT  51 229
 CHQ57_15675 3417519 .. 3417550 - -13.9  -5.17507   AAAAGCCAATAAAAA      CAATGCCAGTCAG GCTTAA CTGACTGGCATTA       GGCCCTGGTGCCGCC 100 82
         tkt 3409202 .. 3409227 - -16.9  -5.24129   TTTTCTTATAAAAAA         CGCCCCCCATC TTTC GATGGAGGGCG          CTTTTTTATTCCAGC 100 72
 CHQ57_15635 3408422 .. 3408461 -   -21  -3.54307   AACATTTGCTTTAAA  TGATAAAAAGACACCGGC ATAA GCCGGTGTCTTTTTATCG   AGTGTCAACATTGAC 100 66
 CHQ57_15615 3402171 .. 3402190 - -13.6  -4.70659   CGCCATATCCAAAAA            TGCCGGTC ACTT GACCGGCA             TTTTTTATGGTCTTC 100 329
 CHQ57_15590 NONE
 CHQ57_15585 3396263 .. 3396280 - -14.1  -4.90266   CGCACCAATGAAAAA             GCCCGGC AAGG GCCGGGC              TTTTCACTCTGTGGC 100 46
 CHQ57_15580 3395573 .. 3395590 -  -8.4  -2.87564   GCAGCCCGCCATAGA             GGCGAG GTGTCG CTCGCC              GGATGCCGCCAACAA  61 41
 CHQ57_15575 3395181 .. 3395209 - -19.1  -3.50393   TCGGATTGCAGACAA        CAAAAAAGCGCCT GAC AGGCGCTTTTTTG        TATGGAGACACTGAG 100 53
 CHQ57_15560 NONE
        zipA 3388940 .. 3388971 - -14.6   -3.9279   AGTTAACCGCACAAA      CAAAAATGCGGCAC CTGG GTACCGCACTTTTG       ATGTACTCGACCCCT 100 48
 CHQ57_15550 3386830 .. 3386861 - -18.9  -3.55801   ACTAACGCCCTGAAA      CAACAAACCCGGC TGGATG GCCGGGTTTGTTG       TTTTCAGCGTATCGT 100 51
 CHQ57_15540 3383254 .. 3383281 - -14.2  -3.34517   ACTTTCCCTCAAAGA        GAGACTCCCTGC TTTA ACAGGGAGCCTC         TACAAATTACATATG  95 32
 CHQ57_15535 NONE
 CHQ57_15530 NONE
 CHQ57_15525 3382072 .. 3382100 - -16.1   -2.5789   GCAAACAGCAGTAAT        GAAAAATCCCGGC CTG GCCGGGATTTTGC        TATTTAACCTCTGTA 100 99
 CHQ57_15495 3377512 .. 3377549 -  -4.8  -3.42056   ATTTTCAACTGACAA   GGCTGTGCAGACGGGCA AAGAG TGCCCACCTGT-CAGTC   ACACCTTGACAGCCA  53 69
 CHQ57_15490 NONE
 CHQ57_15485 NONE
 CHQ57_15480 NONE
 CHQ57_15475 3371839 .. 3371860 - -14.5  -3.33261   ACAGGCAGACAGCAA           GAAGGGAGC CGAG GCTCCCTTC            TTGTATTGCATATCC 100 59
 CHQ57_15465 NONE
 CHQ57_15460 3369270 .. 3369301 -   -16  -3.40403   GCCGCTGCAGCACAA      CACAAGAAGGGAGC CTCG GCTCCCTTCTTGTT       TGCATATCAACGCTA 100 101
 CHQ57_15450 3367392 .. 3367409 - -14.1  -3.98661   CACACTCATGAGAAA             GGGCGCC TGCG GGCGCCC              TTGTTGTTATGGTTC 100 32
 CHQ57_15440 3363897 .. 3363911 -  -2.7  -5.25906   AGAAATCAATAAAAA               GGGCC CTGAT GGCTC               ATCTTGCACAAGGGG  82 61
 CHQ57_15435 3362264 .. 3362282 -  -8.8  -2.70932   GCCCCGCTCGAAGGA             GCGGCC CTTCCCC GGCCGC             CAGACCTGCGTTCTA  60 50
 CHQ57_15430 NONE
        phoB NONE
        phoR 3359597 .. 3359630 - -13.9  -3.73402   AGACTTTTGACCAAA     TGAAGAGAGGGCAGC GTCT GCTGCCCTCTCTTTC      GCTAACTTATTGCCA 100 48
 CHQ57_15415 3358460 .. 3358478 - -17.4  -5.26119   TGCTCAAAAAGAAAA             CGGGCCCC GCT GGGGCCCG             CCTGTGAGAGGAAGA 100 49
 CHQ57_15410 NONE
 CHQ57_15405 3357038 .. 3357054 -  -7.3  -3.73775   GGGAGCCGGATCAAA              GCAAACG GAA CATTTGC              CGTTGCAGGCAAGCC  66 4
 CHQ57_15400 3356001 .. 3356017 -  -3.7  -2.89564   CCTTTATTGGAGAGA              TCAGACA GCA CATCTGA              TCTCATAAATTGAGC  45 28
 CHQ57_15395 3355231 .. 3355243 -  -3.3  -2.73275   TATGGAGAGACACCA                TGCCG CCG CGCCA                TTTCCTTGCTCAGGG  41 35
 CHQ57_15390 NONE
 CHQ57_15385 3354268 .. 3354287 - -13.6  -4.91852   TGCATCAAAAAGAAA            CGGCGACT TGTA AGTCGCCG             TTTGCATCAAGCCAG 100 46
 CHQ57_15380 NONE
 CHQ57_15375 NONE
 CHQ57_15370 3351532 .. 3351547 -  -3.2  -3.75461   CAAACCTTTATTAAA              TGTCAC ATTA GTGTCA               CCCATGGACGGCATA  54 344
 CHQ57_15360 3350839 .. 3350873 -  -9.3  -5.54192   ACCAATGCAAAAAAA    TGCAA-ACGGGCAGCC ATCA GGCTGCCCGTCTTGTC     TCCGGCGAGGAGAAT 100 56
 CHQ57_15350 3349201 .. 3349229 - -10.3  -5.23316   CATCAGATGAAAAAA        CAGGAGCCAGGTT TTG AACCTGACTCCCT        TCCAAGTTGGGCACA 100 95
 CHQ57_15345 3348150 .. 3348181 - -15.2  -4.58395   TGCACCTGTCAAAAA      CAAGAGGGGGAAGC CGAT GCTTCCCCCTCTCT       CATTTCGCTTTATCC 100 48
 CHQ57_15335 3344650 .. 3344686 - -10.2  -3.06418   TTCCCATAGAAACGA   GAACCCCTACTCGTTGG GTGT CCAACGT-TCGGGGTTC    ACTTCACAAGGTCGT  69 172
 CHQ57_15315 NONE
 CHQ57_15310 NONE
 CHQ57_15305 NONE
 CHQ57_15300 NONE
 CHQ57_15295 3336698 .. 3336710 -  -9.1  -3.34089   CTTCAACAACGAAGA                GGCCA TTC TGGCC                AAGCTGGAATACGCC  63 318
        lplA 3333089 .. 3333123 - -19.5   -3.3785   TGAATTGACGGACAA     GATAAACGGCGGGAC TCTCC ATCCCGCCGTTTATC     TTGAGGTTCGTTTGG 100 78
 CHQ57_15250 3323618 .. 3323636 -  -4.5  -3.72576   CTGCTGTTTATGAAA             GTACCGG GGGAA CTGGTAC             CGAATGAGGATCAAG  58 130
         azu 3314813 .. 3314828 - -11.8  -5.31275   GCGCATCATAAAAAA              GCCGGG GCAG CCCGGC               TTTTTCTTCATGACA 100 56
 CHQ57_15210 3314372 .. 3314390 -  -2.4  -3.31144   GCTGGAGTGCCAGAA             GAAGAC CGCCATC GCCTTC             TTTACCCTGCAAGCC  45 80
 CHQ57_15200 3311762 .. 3311799 -  -5.3  -3.56643   TCGACATCGCCGAAA   CCACTCGGGCCGTGCAC GACA GTGGTCGGCCCCACGGG    ATCGCGCAGCAGCGG  58 160
 CHQ57_15190 3310514 .. 3310534 - -18.3  -5.24129   CTTCGCCATAAAAAA            CGGGCCTCC CAT GGAGGCCCG            TTTGCTGTGTGCCAT 100 48
 CHQ57_15175 NONE
 CHQ57_15170 3303542 .. 3303555 -  -6.7  -3.34398   TGGTTTCGGCAAACA               CGAAC GGCA GTTCG                AAAATATCCTTGCCG  59 221
 CHQ57_15160 3301811 .. 3301836 - -19.1  -3.84406   CGGGCATCATAATAA         CAGAGCCGGGA AGGT TCCCGGCTCTG          GATTCTATTGATTTT 100 83
 CHQ57_15155 3300282 .. 3300322 - -12.6  -5.24129   CTGCCCCACAAAAAA  CCAAACAAGAAGCCCGCC GAATT GGCGGGCTTCTTTATCGA  TGGCACAAAGAGATC 100 39
 CHQ57_15130 3292179 .. 3292196 - -14.1  -3.43773   TGGGAGAGGCAAAGA             GGGGGGC TTGC GCCCCCC              GTTCGGATGTCATTG  95 47
 CHQ57_15125 3290911 .. 3290930 - -16.4  -4.08557   GCCTCGAAATAACAA            CCGCCGCC CGAG GGCGGCGG             TTCTCTATCCGGTAA 100 30
 CHQ57_15105 3286608 .. 3286635 - -12.6   -5.1356   CCTGACCAATAAAAA        CCCCCACCTCCC TTGC GGGCTGTGGGGG         TTGTACTTTTCTGCT 100 91
 CHQ57_15095 3284187 .. 3284206 -  -3.4  -2.64747   GTACTGGATCACAAT            GCGGCCAG CTCG CTCGCCCC             TGCATACATTCGGCG  40 83
 CHQ57_15090 3282761 .. 3282779 - -13.1  -5.28176   TTCACCGATAAAAAA             CCGGCGC TCATG GCGCCGG             TTTTGCTTTTCAAGA 100 55
 CHQ57_15060 3275188 .. 3275200 -  -7.7  -3.57144   TGTGTTACGGCCAAA                CGATC AGA GATCG                GCAAACTCCGGGATA  66 16
 CHQ57_15055 3274603 .. 3274616 -  -6.7  -3.38272   GAGGACCATTGAGAA               TGTGC TCAG GCACA                CCTGTAAGGAGTTTC  59 169
 CHQ57_15050 NONE
 CHQ57_15045 3272857 .. 3272892 -  -6.9  -3.16564   TCGGGAGGTTATGAA    CGCGTACCTTTCC TTGACTCGCT GGCAAAGTACGCG     GCTGTAGATTCAACC  57 35
 CHQ57_15030 3270009 .. 3270021 -  -4.1  -4.49311   ATGAGCAGCAGAAAA                TCCAG GCG CTGAA                AGCCCGCATCAATCG  67 309
 CHQ57_15005 3264979 .. 3265005 -  -8.1  -5.29782   GATACGCATAAAAAA         TCCGAAACC AAATCAACA GGTTTCGGA         TTTTTACACATCAGC 100 256
 CHQ57_15000 3263617 .. 3263639 -  -2.6  -6.12328   AGAAGATAAAAAAAA           CCGGCCTCAA GGG CTAATGCCAG           TCAGTTAAGCCTGAC 100 30
 CHQ57_14970 3254873 .. 3254885 -  -3.4  -3.05844   CCGTTGATTGCAATA                CCAA GCTCA TTGG                ATCCCCAACCGGAAC  43 42
 CHQ57_14965 NONE
 CHQ57_14960 3253789 .. 3253808 -  -2.1   -2.7555   CAGACTTGAAGAGGA            TGGTGGT GATCAG ATCACCA             AGTCCTCAGTTAGTT  39 45
 CHQ57_14955 3252522 .. 3252538 -  -6.5  -3.17075   CCCCCTTGAAGTGAA              TGTTGCC CTC GGCCACA              TCGGACAGCAGGCGG  54 339
 CHQ57_14940 3237717 .. 3237734 - -11.3  -5.52384   TTCTCATTAAAAAAA             CCTGCTC CGAA GAGCAGG              TTTTGCATGTCATTG 100 92
 CHQ57_14930 3235968 .. 3235981 -  -2.3  -4.02253   GTAACAATCGAGAAA               GGCTA ATGC TTGCC                AAGTTCTCCGAAGTG  57 295
 CHQ57_14915 NONE
 CHQ57_14910 3232588 .. 3232610 - -13.5   -5.4505   GGCGCCAATAAAAAA           GCCAGTCAG TGACC CTGACTGGC           TTTTTGTTTATCCAC 100 112
 CHQ57_14900 3230373 .. 3230405 -    -5  -3.45023   TCAGCACTAGCATAA     TCGCCCATATG-A-GC AAC GCATCCATATGGGCCA     GGAATAGCTCCTTGC  53 219
 CHQ57_14885 3227703 .. 3227715 -  -4.7  -3.60627   TTATTTGATCGCAAA                GGCCC TTG GGGTC                TCGCCTGCATCATTG  55 387
 CHQ57_14875 3227143 .. 3227156 -  -2.4  -3.39286   ATATGAGTGTAAACA               TCTC ATATCA GAGA                CTTGTTCACTTCCTT  45 31
 CHQ57_14870 3226183 .. 3226203 -  -7.5  -3.03771   GGATACGCCCGAACA            CGCTCAAGC TCT GCTCGACCG            CATCAGCCGCATCGA  59 451
 CHQ57_14845 3222798 .. 3222810 -  -3.3  -3.29511   GGGACCGCCGGATAA                GTGTG AGG CCCAC                AACACCAGTCAATGA  47 148
 CHQ57_14840 3221916 .. 3221936 - -13.3  -3.72087   ATGAAGGCAATAGAA            TGGCCCGCA TAA TGCGAGCCA            TGTTGTGAGGGAAAT 100 47
 CHQ57_14835 NONE
 CHQ57_14830 NONE
 CHQ57_14825 NONE
 CHQ57_14820 NONE
        fliI NONE
        fliJ 3215400 .. 3215410 -  -2.4  -2.85351   GTGGGGGAGACGAGA                 CTGG TAT CCTG                 CTTGAGGGCGTCTTG  41 523
        fliL NONE
 CHQ57_14795 NONE
        fliN NONE
        fliO NONE
        fliP 3210234 .. 3210244 -  -4.6  -2.75064   TGTCCGACTTAACCA                 CCGG CGC CCAG                 GCCGAAACTGTTGGC  46 8
        fliQ 3209876 .. 3209888 -  -3.3  -2.54193   GACTATCGCAAGGTA                CCGCC ATC AGCAG                CAGGCTGTCAGACGG  40 67
        fliR 3209004 .. 3209022 -  -5.2  -3.21747   GCAGCTCAGCAGCAA             TCGCCTCC AGA GGAAGTGA             AGCAGTTCGGTACCA  52 53
        flhB 3207780 .. 3207794 -  -2.8   -3.2505   CAAACATCAAGCCAA               CAATTC AAT GCATTG               ATTTTAAATGATTTT  45 64
        flhA NONE
        flhF 3204202 .. 3204213 -  -5.8  -2.54745   GTTACTCATAAAACT                CCGA ATCT TCGG                 CCTCGCCAAAGCCTG  50 0
 CHQ57_14750 NONE
 CHQ57_14745 3202504 .. 3202517 -  -9.5  -3.34517   ATTCCCTCCTAAATA               GCCGC CATA GCGGC                TCACTTACATGATGC  69 107
 CHQ57_14740 NONE
 CHQ57_14735 NONE
 CHQ57_14730 NONE
 CHQ57_14725 NONE
        motC NONE
 CHQ57_14715 NONE
 CHQ57_14710 NONE
 CHQ57_14705 3194675 .. 3194688 -  -2.3  -4.76123   AAACTAGCAATAAAA               CAGCA CAAG TGCAG                AAGTTATCAGCGACC  68 32
 CHQ57_14700 3194142 .. 3194159 -  -2.7  -2.78596   CACCTTTCTATCAGA             GGGAA CCAATATC TTCCC              ACTCTTCATCGGAGA  41 3
 CHQ57_14695 3193704 .. 3193727 - -13.2   -4.3467   AGCGGGAGATGAAAA          TCAGGAAGGC GAGC GCCTTCCCGA           TGATTTATGAGCGGC 100 30
 CHQ57_14690 3192931 .. 3192944 -  -4.5  -3.36273   GGCGCGCAACATCAA               GCTAC TCCT GCAGC                AAAGGGGTCAGCGAC  51 13
        ccmB 3192177 .. 3192197 -  -2.5  -2.77029   CAAATACCCCGAAAG            CAATAAGCG ACC CTCTTCTTG            ATCCATCGCAACATT  39 87
 CHQ57_14680 NONE
        ccmD NONE
 CHQ57_14670 3190606 .. 3190619 -  -5.9  -2.64616   GGTTGAGTTACAGCA               CGCAC CTGT GCGCG                GGTGAGAAACGATGA  50 64
 CHQ57_14665 NONE
 CHQ57_14660 NONE
 CHQ57_14655 NONE
        ccmI 3186301 .. 3186328 - -10.5  -2.92246   TTAATCCGAATTATA        GGCACCCGCCCC ATAGA GGGGCGGG-GCA        AAGGGGTATTAGAGG  71 34
 CHQ57_14645 3185410 .. 3185425 - -11.8  -4.80882   AGCGGATATGAAAAA              GGCGCC CGAA GGCGCC               TGTTATCGACAGCCA 100 47
        grxD 3184034 .. 3184086 -  -7.9  -5.45726   TACAGTGTAAAAAAA GCCAATAAAAACAATGCCAGTCAG GCTTAA CTGACTGGCATTAAG-CCATTGGC TCCCCTTTTTGCATG 100 55
 CHQ57_14620 3179052 .. 3179075 -  -3.8  -2.74012   CGAGCAGGGTAAGCA          GCA-GCAAGCC GGT GGCTCTCATGC          CCGCCTCCGTTGCCA  43 20
 CHQ57_14615 3178701 .. 3178726 -  -9.7   -5.1861   GCCAGCACCAAAAAA         GAAAGGGAGGC TCGC GCCTCCCCTTT          TCTTTCCACACCCGG 100 49
        pdxH NONE
 CHQ57_14605 3177279 .. 3177308 -  -7.2  -3.28712   GCGCCCGCTCGATAA       GCAGCTCCATCAG CTTGC CTGACAG-GCTGC       AGGCAGGCTCAGATG  59 5
 CHQ57_14600 NONE
 CHQ57_14595 3175047 .. 3175081 - -13.7  -3.85817   AGGCTGGCTGACAAA     GACGAAAAAGGCGCC TTGAT GGCGCCTTTTTCATG     AGCGGCGGCTTATGC 100 35
 CHQ57_14540 3162036 .. 3162050 -  -5.7  -3.52678   AACGCCCCACAAACA               CAGTC AGCAA GACTG               AAGACATGACGCCCA  56 240
 CHQ57_14530 3160632 .. 3160655 -  -3.8  -3.82353   TACTGAAAAAGAACA          GACTGGTTTC ATGA AAACCCAGCC           CTACCCCTGCAAGTG  56 391
 CHQ57_14520 3159704 .. 3159716 -  -3.4  -3.16742   GTGAACCGTTACGAA                GACA CCCTC TGTC                GAGTGCTCTCCCGTT  45 132
 CHQ57_14515 NONE
 CHQ57_14510 NONE
 CHQ57_14505 3157298 .. 3157314 - -13.7  -3.93769   ACCCCAAAAAACGAA              GGAGCCC AAT GGGCTCC              TTTTTATTGATCTCG 100 77
 CHQ57_14465 3147411 .. 3147446 -  -3.2  -3.10344   CTCCCATGCAAGAGA    GGGCCAACCGGCAG-AC CCT GTGCTAGCGACTGGCCA    GCAGGGCGGCGTGCT  43 12
 CHQ57_14460 NONE
 CHQ57_14455 3145752 .. 3145776 -  -3.4  -2.66326   GCAACGGGAAATGCA          CGCAACCCCC GGCAA GTTGGCTGCG          AGGAAGTGACAAAGA  40 48
        scpB 3145091 .. 3145139 -    -6  -3.21416   CACTTTGATCATTAA GAGACTTGGCCCACGCC-TTGGC AAGT GCCAACGACATGGATCAGGTTTC ACGGCCCTCAGCCGG  54 17
 CHQ57_14445 3143934 .. 3143960 -  -8.1  -5.29782   GATACGCATAAAAAA         TCCGAAACC AAATCAACA GGTTTCGGA         TTTTTACACATCAGC 100 130
 CHQ57_14440 3142450 .. 3142461 -  -5.8  -3.54741   TATCAGTGCCGCAAA                GGCT AACA AGCC                 CGCTCTGGCAGAGCA  58 163
        tesB 3141512 .. 3141540 - -16.1  -4.07568   TGCCGGTTCGGAAAA        CAAAACGGGAGCC ACT GGCTCCCGTTTTT        TATAGCTGGCATCTG 100 44
 CHQ57_14415 3137149 .. 3137172 -  -3.9  -2.87344   GATCTGGGTCACAGA          GTCTTCTACC GTCTT GGCAGAAG-C          TCCCGGATAGCTTGC  45 196
 CHQ57_14405 NONE
 CHQ57_14400 3131038 .. 3131052 -  -2.1  -3.55946   CGACTCCAAATAACA              CCGTGT GGAT AC-CGG               TTTGAAGCCGTATGA  47 168
 CHQ57_14375 3125560 .. 3125576 -  -8.1  -3.41229   ATAGTCTGATCATAA              TCATCTA CAT TAGATGA              GGCGTCATATCAGTT  62 35
 CHQ57_14370 3125235 .. 3125255 - -14.7  -4.99645   ACCGCATAAACAAAA            GGGGCACCA TGA TGGCGCCCC            TTAGAGGATGAGATA 100 103
 CHQ57_14365 3124652 .. 3124662 -  -8.2  -2.72379   TTAATCCCTGAACCA                 GCGC CAA GCGC                 GGTAGAGGCTGTAGG  60 0
 CHQ57_14360 NONE
 CHQ57_14355 3123424 .. 3123450 -  -3.5  -5.18866   TCCAAATAAACAAAA         CCCCGGCGCAC ATACA GCATGTCGGGG         TCAAAGAGAGGTGGT  84 311
 CHQ57_14345 3122886 .. 3122916 -  -6.1  -2.53905   CCAGAAGGGATGAAT       CGGGGAATGGCGT GGATT ACAGCATTCCACG       CTCGGCCAGAGAGAC  49 11
 CHQ57_14340 3122138 .. 3122160 - -14.9  -3.84451   TCCTTCAAATGCAAA           CAGCCCCTC GGCGT GAGGGGCTG           CATGAGGTTGTGGTG 100 344
        rfbB NONE
 CHQ57_14310 3118099 .. 3118117 -  -2.3  -5.10163   AATTGCAAAAGAAAA             GGGTAGC GTGAG GCCACGC             CTTTCTGTTTTATCC  74 83
        rfbA 3117187 .. 3117199 -  -4.1  -2.70232   CCCAATATCATATCA                GGCTT TCG AAACC                ATCTTTAGCAAATAT  43 10
        rfbC NONE
 CHQ57_14295 NONE
 CHQ57_14290 NONE
 CHQ57_14285 NONE
 CHQ57_14280 3111993 .. 3112005 -  -2.7  -4.62783   CATTCAGCTTAAAAA                TTATG TTG CACAA                AATGAAAAATCTGAA  68 68
 CHQ57_14275 3110905 .. 3110915 -  -5.4  -3.12999   CTATTTTAGACTCAA                 GGAT ATA ATCC                 TCAGAGTAATAATAC  52 78
 CHQ57_14270 3108695 .. 3108708 -  -5.3  -5.26316   GGATTGTATAAAAAA               CCAAA AAAA TTTGG                CCGAAAGTTAATCGC  88 397
 CHQ57_14265 3106942 .. 3106956 -  -2.2  -4.93547   TCAACCAACCAAAAA               TTAATA GCA CATTAA               CGCAGTCGAATTTTA  71 22
 CHQ57_14260 NONE
 CHQ57_14255 NONE
 CHQ57_14250 3102717 .. 3102727 -  -2.4  -2.62244   TGCCTCAATAAAACC                 CCAG CGT CAGG                 CATTAGTCATGACCA  38 28
 CHQ57_14245 3099924 .. 3099947 - -13.2  -3.23393   CCGGATCTCAGAAGA          GTCAGGTGGC CTTC ACCACCTGAC           TGAATAGGTTGTCGA  85 54
 CHQ57_14240 3098888 .. 3098921 -  -6.1  -2.97747   CGTTTATAGGATATA     GGGAAACTTGC GAATTGACCAGA GCAAGTCTCCC      AAGTGAGCCCCGTCT  52 41
 CHQ57_14235 3098561 .. 3098585 - -15.1  -4.94992   GCAAAGTGACAAAAA          TAAGGCCGCCA ATA TGGCAGCCTTA          TTGCAGCATAGAAAA 100 43
 CHQ57_14230 NONE
 CHQ57_14225 NONE
 CHQ57_14220 3094955 .. 3094981 - -15.2  -4.84311   GGGTAGATAATAAAA         GAGCGAGCAGCC TAC AACTGCTCGCTC         TGCTTTATAAGGAAA 100 67
 CHQ57_14215 3093145 .. 3093159 -  -2.1  -2.60496   CGGTTGGTGAAACAT              CGCGCA ACCT TGC-CG               CCCTGCTTTGCACCT  38 51
 CHQ57_14210 3092338 .. 3092351 -  -9.5  -5.59534   AATGACAATAAAAAA               GGCGC CGTA GCGCC                TCTTTAGGGAGAAAC 100 52
 CHQ57_14205 3088259 .. 3088292 - -22.5  -4.16259   AGACAAGGACATAAA     CGAGGGGGGATCGCC TGCT GGCGATCCCCCCTTG      TACACTGCGTCAGCC 100 44
 CHQ57_14195 3086494 .. 3086505 -  -5.8  -4.35644   ATCAGCAGAAAACAA                GGCA TCCA TGCC                 CGGCAGATCAACCAC  72 33
        astE 3085096 .. 3085115 - -10.7  -4.85129   AGCAGAGACGAAAAA            GGGAGCC GCTTCG GGCTCCC             TTTTGGGTGGATACG 100 118
        pdhA NONE
 CHQ57_14180 3082684 .. 3082694 -  -5.4  -2.70932   TCTGCGGGGCAATCA                 CCAA ACG TTGG                 AAGATTCCATGGCTA  48 81
 CHQ57_14175 3081523 .. 3081551 - -13.1  -4.47183   GATTACGCAAACAAA        TTTGTGCCCTGCC AAT GGCAGGGCACAGC        CGTTTATAGAGCAGG 100 29
 CHQ57_14170 3081094 .. 3081118 - -13.5  -5.38054   GCCCATAAACAAAAA          GCCGTGGAACC AGA GGCACCACGGC          TTTCTTAAATTCTGT 100 46
 CHQ57_14165 3080570 .. 3080584 -  -4.2  -3.02511   TTGATCCGGCCAACA               TGAGCC TGG GGATCA               AGTTGCGCAGTGACA  46 170
 CHQ57_14155 3079688 .. 3079700 -  -3.3  -2.73875   TTTTCGGCAATATCA                GCCCA GTT CAGGC                GTCACCAGGGAGATC  41 10
 CHQ57_14150 3079128 .. 3079153 - -11.9  -4.98061   ACATATCAAACAAAA         GACCCCG-CACC AGA GGTGACGGGATC         TTTTTTGTTTGCAAC 100 70
 CHQ57_14135 3075633 .. 3075669 -  -6.5  -4.11805   AGGAGAGCATAGAAA    GCACGGTCGATCCCAAA GAG TTTGGCATCAGCCTCGC    CAACTTTGTCTAGTA  68 35
 CHQ57_14125 3073329 .. 3073353 -  -6.4  -3.30124   CGCCATGCCCCACAA         CCCCATCAACC GTCA GGT-GCTGGGG          TTGATTGGCATCAAC  56 292
 CHQ57_14115 NONE
 CHQ57_14110 3069853 .. 3069893 - -21.9  -3.21695   GGAGGAGGAATTCAA  CCTGCTCAAGCAGCACCAG GCA CTGGCGCTGCCCGAGCTGG  CAGAGCGCAAGCAGA 100 365
 CHQ57_14090 NONE
 CHQ57_14085 3066724 .. 3066757 -  -8.3  -2.64107   GAAATTGCCATAGCA     CACCTCCTGCTTGATA AAT TATTA-GCAAGAGGTG     TGCCAAAGAGGGATT  59 51
        flgB NONE
 CHQ57_14075 NONE
 CHQ57_14070 NONE
 CHQ57_14065 3063778 .. 3063795 - -14.1  -5.45802   TGTGGAAAATAAAAA             GGGGCGC CGAA GCGCCCC              CTGTACCACCGTTAT 100 43
        flgF NONE
        flgG NONE
 CHQ57_14050 3061393 .. 3061408 -  -3.9  -2.74248   TAACATCTCCTAAAG              CGGCC ACCAGG GGCCA               TTGAAAAAGCTGGTA  43 4
 CHQ57_14045 NONE
 CHQ57_14040 NONE
 CHQ57_14035 NONE
        mgtE 3054028 .. 3054057 - -19.5  -3.76232   CCCGTAAACAGACAA       GCAAAAAGGCAGC CCAG GCTGCCTTTTTGC        TGTTATCCACTCGTT 100 52
 CHQ57_14005 3048596 .. 3048624 -  -8.9  -2.52464   TCTGTGGTCAAGCCA        CGCACTTTATGCA GGT CGCACAAAGTGCC        AAAATTCCGACGCAT  58 203
 CHQ57_14000 3047011 .. 3047039 -  -6.8  -3.85698   CTGGGCTGTCATAAA       CCTGACCTCAAAC TGGC GATT-AGGTCAGG        TTATTCAATTTCCAT  66 100
 CHQ57_13995 NONE
 CHQ57_13990 3044326 .. 3044374 -  -7.9  -2.73334   ATCAACGATACAGCA GGGGCCAGGCTCAAACGCCAAGG ACC CCATGATAATCGAGCCAGGCCGC CAAGACCATGACAGT  57 284
 CHQ57_13985 3043427 .. 3043450 - -16.8  -3.38281   GCATGCAAAATGTAA          CAAGGGAGGC TTAG GCCTCCCTTG           TCATTTCTAGCTACT 100 93
 CHQ57_13970 3040824 .. 3040844 - -14.7  -2.72977   ATGCCATACACAGCA            GAGCCGGCA AGG CGCCGGCTC            CATTCTCACCCCTCA  90 70
 CHQ57_13965 3039678 .. 3039699 - -14.4  -3.65314   AAGGCAGATAGAGAA           CCGCCCGG ACTTGG CCGGGCGG            TCGGGAACACGATGA 100 46
 CHQ57_13960 3038844 .. 3038862 - -13.1  -5.03994   TCGCACAGACAAAAA             CCCCGGC CTGGT GCCGGGG             TTTCTTTTTGGTTTC 100 78
 CHQ57_13940 3033659 .. 3033674 -  -3.3  -4.15044   CTTTTCGGCAAGAAA              CAGAT TCAACC ATCTG               TTTTATATGAAAATA  60 88
 CHQ57_13935 NONE
        pstA 3029509 .. 3029529 -  -6.1  -2.71011   ATCTTGTCTCAAGGA            CGCCGGA TTAATGC TCCAGCG            ACCGGAATTTTTCAC  51 122
        pstB NONE
        phoU 3027728 .. 3027742 - -12.8  -5.46657   CAGTGCAACAAAAAA               GGCGCG AAA CGCGCC               TTTTTATTCATTTCA 100 41
 CHQ57_13915 NONE
 CHQ57_13910 3025640 .. 3025671 -   -13  -4.03204   GAGGAAAGGTAGAAA      TGAGTGAGGCCACC CAAG GGTGGCCTCACTGC       TGTCTGGTTAGCTGG 100 45
 CHQ57_13905 NONE
 CHQ57_13900 3023019 .. 3023058 - -16.7   -4.1673   GAACCCGGGAACAAA  GCAAAA-AAGAGAGCGCC ACCAG GGCGCTCTCTCATTTTGC  AAGGATCATTTATCC 100 44
 CHQ57_13875 3017455 .. 3017475 -  -2.5  -4.82901   GTGCTCCCATAAAAA           CTCGGCGG GGGCCG CCACCG-G            CTTCGTCGGCCTGTT  72 223
 CHQ57_13830 3007562 .. 3007590 - -19.7  -4.83615   CAGGGTTCATAAAAA        GAAGAGGCGACCC CTT AGGTCGCCTCTTC        CTTATTATCTTGTCT 100 116
 CHQ57_13810 3002180 .. 3002199 - -13.6  -4.61873   TCGGATAAAGCAAAA            CGGCCAAG CAAG CTTGGCCG             TTTATCAACTCAATC 100 56
 CHQ57_13805 3000982 .. 3001000 - -12.4  -4.52857   ACGTGGCAGACAAAA             GCGCCCGT TTG ACGAGCGC             TTCGTCAACTCTTTA 100 95
 CHQ57_13800 2999642 .. 2999664 -   -17  -4.90869   AGCAGGAACGAAAAA           GCCCGCCAGA GAT CCTGGCGGGC           TTTTTACTGAGCGAG 100 67
 CHQ57_13780 2994661 .. 2994679 -    -6  -3.65902   GGTATTCTAGCCAAA             GCTTGG GCATCCA CCAAGC             ACCGCCATCTCGATA  60 68
 CHQ57_13775 NONE
 CHQ57_13770 2991813 .. 2991825 -  -4.8  -2.71011   ACCCCCCTTCAACCA                TGCC GAGCG GGCA                AGACCACCAGGCCCC  46 53
 CHQ57_13765 2991510 .. 2991530 -  -6.1  -2.78018   AGCGGGCAGGAATGA            CCACCACGA AAC TCATGACGG            CATCTCATCGCTATT  51 17
 CHQ57_13760 2990699 .. 2990716 - -12.7  -5.48063   ATTCAACACAAAAAA             CGGTGCC TGCA GGCACCG              TTAAGAGGGTCACAT 100 55
 CHQ57_13755 2989850 .. 2989864 - -12.8  -4.81851   AGCGAAATGCAAAAA               GGCGGC CGG GCCGCC               TTTGCTTGCCACACG 100 49
 CHQ57_13750 2987735 .. 2987747 -  -3.3  -3.75105   TTAATCCATCAATAA                CCTCA GGA TGCGG                GCCATTATGGCATTT  53 97
        pgsA 2987058 .. 2987083 -  -2.5  -3.44888   AACGACAGGGAAACA         CCGTTTTCTGC CAAG GCAGAAACTAG          AAGCGGGAGTGGTAG  47 22
 CHQ57_13740 2986794 .. 2986807 -  -6.7  -4.18197   ACGCGCCATGCAAAA               GAGAG TTGG CTCTC                TATTGTCTGAATTTG  72 39
 CHQ57_13735 2986688 .. 2986702 -    -7  -3.16742   CGCAATCGGTATCAA               GTCCGC GTG GCGGGC               TTGTCAATATGGAGG  57 34
 CHQ57_13730 2986573 .. 2986585 -  -2.7  -3.04398   CTTTTCTTTTAAAAT                CATCA ACT TAATG                GTGCCCGAGGCCGGA  43 24
 CHQ57_13725 2985443 .. 2985457 -  -4.4  -2.72028   CTGACTACAAAAATC               TTTAAT TAG ATTAAA               CTTTATCCGGCCATT  46 39
 CHQ57_13720 2983761 .. 2983789 -  -7.5  -3.06796   CCTTAGCTTATGCAA        TTTCCAACCCTTT GCG AGAGCGTTGGAAA        TCGGCAAAACCTTTT  59 403
 CHQ57_13715 2981578 .. 2981598 - -10.4   -5.5112   GTCACCAATAAAAAA            GGCCCACC GATCA GGTGAGCC            TCGAATATTACGCTT 100 33
 CHQ57_13710 2979769 .. 2979787 - -10.2  -3.63744   CCCCCTTTCAAAAGA             GGCCCCCA TTA CAGGGGCC             AATCTCGGTTATTAC  77 37
 CHQ57_13705 NONE
 CHQ57_13700 NONE
 CHQ57_13695 NONE
 CHQ57_13690 2977340 .. 2977365 -    -9  -2.90992   AACTCGGGTAAATGA         GCGGG-GGTGC TTATC ACACCGCCCGC         GCTGACTTTCGCTTA  65 254
 CHQ57_13685 NONE
 CHQ57_13680 2974791 .. 2974810 - -12.2  -5.54338   GAAGGAAAACAAAAA            GGCCACTA TCGC TAGTGGCC             TTCGTAAGGCTTTGA 100 213
 CHQ57_13675 2973648 .. 2973672 - -16.5  -4.48987   CTGCCAGAATGAAAA          GAGGGGAGCAT TCT ATGCCCCCCTC          TTCTGGTATGAATTC 100 490
        queA 2958715 .. 2958737 -  -6.9  -3.86194   AAGGCCCGGTATAAA          GGGC-GAGGC TTAT GCCACTGCCC           GGCGACGGGTGACGA  68 12
 CHQ57_13585 NONE
 CHQ57_13580 NONE
        secD NONE
        secF 2954276 .. 2954293 - -14.1  -4.27117   GCCCCATAAGAGAAA             GGGCGCC TCAC GGCGCCC              TTGTCGATTACGGCA 100 33
 CHQ57_13565 2953783 .. 2953816 -  -9.5  -3.63627   CCCGCATATGGTAAA     GGTCAACCGCCACTT TGTC ATGTGGCGGTTCCCC      TCTCCCTCAAATAAA  73 41
 CHQ57_13560 2952751 .. 2952767 -  -9.4  -4.84527   CGCAGACAGCAAAAA              GGCCTC ATCAA GAGGCC              TTTTTTACATCGCAG  95 52
 CHQ57_13545 2949372 .. 2949406 -  -3.5   -3.1811   TTTTGTAGAACAAAG     CATCATTAGCCAACC GGGGA GGCTGGCTAAACTTG     GAGGATGGAGAAGGA  47 420
 CHQ57_13535 2948490 .. 2948508 -  -3.8  -2.89191   GCACATGGTCACATA             CCCGACTA AAA CAGTCAAG             TATATGGTTGAGTAA  45 52
        iscR NONE
 CHQ57_13525 NONE
 CHQ57_13520 NONE
        iscA NONE
 CHQ57_13510 2945272 .. 2945288 -  -3.7  -3.32769   GCGTTAAAGGATCAA              GACTC GAACAGT GAGTC              TTCGAATCGTTCCAG  49 5
        hscA NONE
         fdx 2942958 .. 2942983 - -10.3  -5.33785   AACGAGCACAAAAAA         GGCCGTTCCCC TCAA GGGTCACGGCC          TTCACCATATCATTA 100 94
 CHQ57_13495 NONE
 CHQ57_13490 2940226 .. 2940243 - -12.7  -4.21908   CAGCACTACTGAAAA             GGGCACC CTCA GGTGCCC              TTCCTTGACGATTGT  95 49
 CHQ57_13485 2939516 .. 2939531 - -10.4  -5.42198   GGCCAAAAAACAAAA              GGGAGC CGAG GCTCCC               TTGATCATCTTCAAA 100 49
 CHQ57_13480 2938287 .. 2938298 -  -2.2  -3.78329   GCTTAGCAAGTTAAA                CCAT TTTG ACGG                 AAATCCCATCCTGTT  51 9
 CHQ57_13475 NONE
 CHQ57_13470 2936541 .. 2936556 -    -4   -2.6927   ATGGCGGACAGATTA              CTC-CTG CGG CAGTGAG              AGGCGAGCAGTCCGG  43 7
 CHQ57_13465 2935380 .. 2935405 - -13.3  -3.79445   AATCAGCAACCTAAA         GACGGGGCCACC CTA GGTGGCCCCA-C         ATTGGCTCAACCTTT 100 32
 CHQ57_13460 NONE
 CHQ57_13455 NONE
 CHQ57_13450 2932117 .. 2932142 - -14.7  -4.06384   TCTCAAGACGACAAA         GGCTCCGGGTC CGAA GACCAGGAGCC          GGATATTCACATTGA 100 48
         der 2930562 .. 2930583 -   -13   -5.4505   CTTCCCAAGAAAAAA           CGGCTGCC GGTGAG GGCAGCCG            CTGGGCCTTATTTCT 100 33
 CHQ57_13440 NONE
 CHQ57_13435 2928685 .. 2928700 - -11.8  -4.05991   AACACACAGCATAAA              CCCGGC ATTT GCCGGG               TTTTTTTATTCTCTT  91 112
 CHQ57_13425 2922699 .. 2922727 - -21.1  -4.82863   GAAGTAGAAAAGAAA        CAGCCCAGCAAGC GTA GCCTGCTGGGCTG        TGGGTCAGGCTGACC 100 100
 CHQ57_13420 2921246 .. 2921272 - -11.6  -4.42386   GCCCGATGCACAAAA         TCCGAAACCAGC CCG GTTGGTTCCGGA         TTTTTTTATCTGCAT  95 400
 CHQ57_13410 2919320 .. 2919344 - -13.6  -3.24747   TTCGGATAGTACGAA         GGGGGC-AGGC ACTT GCCTAGCCCCC          ATCCGAGTCAACAAA  89 106
 CHQ57_13405 2917400 .. 2917422 -  -5.5  -4.49556   CCGCCACGAAAGAAA          CAGGGGCCGC CGGG GCA-CCCCCG           AACGGCCGGTCTGAT  72 69
 CHQ57_13400 2915453 .. 2915483 - -24.1  -4.39386   GGGAAACCATGAAAA       TGCCGCCGGGCAG ACACA CTGCCCGGCGGCA       TTTTACGCGGCAAAG 100 45
 CHQ57_13395 2914519 .. 2914535 - -13.7  -3.30701   TTCCATTAAAGCGAA              GGGAGCC ATC GGCTCCC              TTGATAGTTGAATCC  95 57
 CHQ57_13390 2913156 .. 2913174 - -14.6  -5.71983   CGAACGATAAAAAAA             GGAGAGGC CAG GCCTCTCC             TTTTCGTGTGCTGAT 100 47
 CHQ57_13385 2912625 .. 2912654 - -15.2  -3.52113   ACCGGTGCAGAAACA       GAAAAACCGGCA GAAGGT TGCCGGTTTTTC        AATGGCTGACAGGGC 100 41
 CHQ57_13380 2911700 .. 2911731 -  -4.3  -2.86164   CGGCGAACCATCACA      GCCACCCTTGCCA TCTCAG TGACATGGGCCGC       CGCGCAGACGCTCAT  47 37
 CHQ57_13375 2910491 .. 2910510 -   -15  -3.89215   CCTGAGAAAGTGAAA            GAGGCCGC TGTT GCGGCCTC             TTTGCATACTGCGAT 100 53
 CHQ57_13365 2906791 .. 2906813 - -14.9  -4.41548   TGACACCGCATAAAA           GAGGGGCAC TCAGG GTGCCCCTC           TTTTCGTTGATGCCC 100 66
 CHQ57_13350 2902474 .. 2902495 - -10.8  -4.40237   CAGCACACATGAAAA           GGGCCGCC TCAATG GGCAGCCC            TGCTTGCTATCATTT  93 286
 CHQ57_13330 2900070 .. 2900105 -   -15  -4.33621   GATTTAACCAATAAA    TAAAATCCCGACAAAA CCTG TTCTGCCGGGATTTTA     TTTTTCCACCTGCTC 100 190
 CHQ57_13310 2894155 .. 2894175 - -12.5   -4.7373   TCATTCCAGCAAAAA            GACCCCGGC ATG GCCGGGGTA            AACACGGGGTGGAAC 100 105
 CHQ57_13290 NONE
 CHQ57_13285 2887573 .. 2887593 - -12.6  -4.59773   TCTGATCCTGAAAAA            GCCCTGTC TCCAT GACAGGGC            TTTTTTGCATCAGGG 100 79
 CHQ57_13220 2872710 .. 2872720 -  -2.4  -3.24925   ATCCCATACCATCAA                 CTGG CGG CCTG                 TTCGTGACTCTGCTC  43 11
 CHQ57_13215 2872318 .. 2872336 - -13.2  -5.42514   CTAGAAATGAAAAAA             CCCGTTGA AAT TCAACGGG             TTATATTTGGCGGTG 100 33
 CHQ57_13210 2870855 .. 2870865 -  -4.6  -3.17222   TAAATCATGAAGATA                 GGGC CAT ACCC                 GCCCCATTAAACCGC  49 113
 CHQ57_13205 2868950 .. 2868972 -  -9.8  -2.87132   CGCCTTCTTTAGATA           GTGGGCAGGA TTT CCCCACCCAC           GACGTGGATCCCTTT  68 97
 CHQ57_13200 2867718 .. 2867733 -  -3.2  -4.83615   TACCCTCCATAAAAA              TGGGTT CTCC ACCCCA               CTCCGGTCGCTGCGC  71 236
 CHQ57_13195 2867111 .. 2867130 - -12.2  -4.89339   AATCAGGTATAAAAA            TGCCACCA ACAA TGGTGGCA             TTGGTCGTCTGTCCT 100 44
 CHQ57_13190 2865544 .. 2865570 -   -11  -2.94218   ACTCTGGATCATATA         TTCACATAGAAC GCA GTTCTATGTGGA         ATTTATGAAAGTAAA  71 373
 CHQ57_13185 2864222 .. 2864237 -  -5.4  -4.56775   AGCTGTGCCCAAAAA              TCGAGA TAAG CCTCGA               AAATGAGGCTAAATG  72 159
 CHQ57_13175 2862356 .. 2862386 - -16.2  -4.40692   TCTAAAAAATAACAA       GGGACTGCAAACGC GCT GCGCTTTCAGTCCC       GCTTGTTTTAAGATT 100 197
 CHQ57_13140 NONE
 CHQ57_13135 2856463 .. 2856493 - -12.7  -3.14132   TGTTCGGCTCATCAA       GTGAGCCGATC GGTCGGAGT GATCGGCTCAC       CAAATGAGCCTATTG  81 73
 CHQ57_13125 NONE
 CHQ57_13120 2853812 .. 2853823 -    -3  -2.53164   TGAGCCACGATTAAT                TACA AGTG TGTA                 TTCGTCATTAACCTT  40 75
 CHQ57_13115 2852856 .. 2852886 - -14.8  -2.53213   TAACGTTTGAATTGA      GCGGA-CTGCGCG GCTTTT CGCGCAGGTCCGC       TCGAATGATGGGTTG  89 56
 CHQ57_13110 2850781 .. 2850829 -    -9  -2.71177   ATAGAGAAAACAGAC TACCCGCTC-CCGGAAGAGTTGTT GTC AACATC-CTCCCGGTGAACGGTTA CGCATGGACCGTGTC  63 23
 CHQ57_13100 NONE
 CHQ57_13095 2847544 .. 2847582 -  -8.9  -3.63569   CTAACGCCTCAATAA  TGGGCAACCTTGTG-GCG AAGC CACGCTTAAGGTTGCCCA   ACCGAAGGCGACATT  69 58
 CHQ57_13090 2846641 .. 2846664 -   -11  -3.63837   ATAACGCCTCAATAA          CCGG-CGCAGC TCT GCTGCGTCCGA          CGTCGTAGGCGTGTA  81 54
 CHQ57_13085 2845571 .. 2845585 -  -4.3  -2.70932   CCCTTGGGTTAATCA               CATAG AACGG CTATG               GCACAAGTTACATGA  46 170
 CHQ57_13075 2843224 .. 2843235 -  -2.2  -2.91924   CCACCCGTGATAAAG                GACA TGCT CGTC                 GCTTGATGGCCATCT  41 193
 CHQ57_13055 NONE
 CHQ57_13050 2838351 .. 2838373 -  -8.4  -3.01712   TTTTGTTTGGCAACA           CACATCACCC TGA GGATGAGGTG           TAGCAAATCAAGCTT  62 282
 CHQ57_13045 2837848 .. 2837859 -    -3  -4.07568   CCCCTTGCTCGAAAA                TTCA AAAA TGAA                 ATGCTCACCCTCCCC  58 73
 CHQ57_13040 NONE
 CHQ57_13035 2836382 .. 2836408 -  -7.2  -3.85698   TCTGCCTGTCAGAAA         GCCCCGAGTG TAGCGGT CACCTGGGGC         TGGGGCAGGTGCGGC  66 15
 CHQ57_13025 2833976 .. 2833992 -  -3.7  -3.73995   TTTTTGATAAAAAAG              TTGTCTC TAC GATACAA              AATCCCCCATCCTGA  56 244
 CHQ57_13020 2832666 .. 2832682 -  -2.3  -3.29325   GTGTGAGAAGCAATA              TTTCGAA CGG CTCAAAA              GTGTCTAGAGAAGCC  45 49
 CHQ57_13010 2830691 .. 2830708 -  -8.4  -2.61264   TGGCTGACTGATAAT             GGCTCG GCGTAT CGAGCC              CATGAGACCCGCGCG  52 311
 CHQ57_12995 2827934 .. 2827958 -  -8.5  -2.87132   CCCGCCCTTGATAGA          CTGCCAGATCG GTG CGATCCAGCCG          GTGCAGCTCAATATG  61 248
 CHQ57_12990 2827467 .. 2827488 - -10.9  -2.71011   ATCCTGCGGGAAGGA           TCAGCCACC GGTC GGTGACTGA            CAATCGACAGCGTCT  70 4
 CHQ57_12985 2824944 .. 2824964 -  -8.3  -3.52102   ACCCTATCCATACAA            CCTCCATTT GAA ATATGGAGG            ACTATATCACATCAA  67 101
 CHQ57_12980 2824524 .. 2824546 - -13.5  -3.95036   AAGTAGTGTAAACAA           GACACCGGT TTGAG ACCGGTGTC           AGGTGATAACTAGAT 100 116
 CHQ57_12945 2819462 .. 2819486 - -12.2  -5.72622   TGGATAAATAAAAAA         CCCGGCGAACC GCAA GGTT-GCCGGG          TTTTTTATTGTGAGC 100 87
 CHQ57_12935 NONE
 CHQ57_12930 2816312 .. 2816331 - -11.4  -5.18357   GAATTCAGCAAAAAA            CCCCAACC TCTC GGCTGGGG             TTTTTTGTCGCTTTC 100 54
 CHQ57_12910 2813817 .. 2813827 -  -6.8  -3.02511   GGGACTGCGCCAACA                 GCTG CGT CAGC                 AACCCTTGTCACGGG  52 292
 CHQ57_12890 2810094 .. 2810120 - -16.7  -3.82191   CCAACTCGATAAGAA         GAAACGAGCGG ACCGG CCGCTCGTTTC         TGACTGTCGTGACTT 100 75
        lolA 2806700 .. 2806733 -    -6  -3.29268   ATAGATCCAAAGACA     TCATGCGGGCCGCCA GCAGG TGATGGCCCG-ACGA     GACATCCAAAGAGAA  56 49
 CHQ57_12875 2805280 .. 2805291 -  -7.2  -2.95884   TCACGAATGCACATA                GGCG GGCT CGCC                 CTGTCAGGTGTCCCG  54 29
 CHQ57_12870 2803612 .. 2803644 - -17.1  -2.71791   ATTTGGCGCCCAAAT      GCACAACGCCATGGC GTG GCCATGGCGTTGTAT      TTACGCGAGTGCGTT 100 40
 CHQ57_12865 2802988 .. 2803005 -  -4.1  -2.82933   CTCGAAGTCACTATA             CCTGTTT AAGA AAACTGG              ATGAGTTCAACATGA  43 3
 CHQ57_12860 2801393 .. 2801410 - -12.7  -3.92996   GCCCAGACACAACAA             TGGGGGC CGCA GCCCCCA              TCTCATCTCTGTCAC  93 56
 CHQ57_12855 2800372 .. 2800391 - -10.7   -5.4477   AAACGCGCAAAAAAA            TCCCGGC TCAGGG GCCGGGA             ATTGCGCTCAAAAAT 100 93
        pspA NONE
 CHQ57_12815 NONE
        pspC 2792199 .. 2792224 -  -6.9  -3.07816   GTTGCACTCACCGAA         CCTGC-CAACCA GAT TGGTCATGCAGG         TTCGATGAGTCCGGC  56 65
 CHQ57_12805 NONE
 CHQ57_12800 2789539 .. 2789562 - -18.2  -5.00616   TTGCCCCTCAAAAAA          GCAGCCGACC CCAG GGTCGGCTGC           CGACGTAAATTGTAA 100 76
 CHQ57_12795 NONE
 CHQ57_12790 2788193 .. 2788226 - -17.3  -3.49419   CTGGCCCATAAAAAT     GCGGGCCCGCCCCGC TTTC GCCGGGCAGGCCCGA      GTCACCGGATGAGGC 100 41
 CHQ57_12785 2786513 .. 2786534 - -13.7   -3.4811   GTCGCTATAAGAAGA           GGGCCCACG CTGG CGTGAGCCC            CGATATATCACTTGA  95 51
 CHQ57_12780 NONE
 CHQ57_12775 NONE
 CHQ57_12770 2784016 .. 2784033 - -12.7  -5.28176   GTCAGCCACAAAAAA             GAGCGCC ATCA GGCGCTC              TTTTTTTATCCACAC 100 48
 CHQ57_12765 2782606 .. 2782623 -  -2.7  -3.53761   CAACTTGTGCTCAAA             TTCATGA ATCG TCATGTA              ACGCAGCCTCATTTT  49 147
 CHQ57_12760 2782295 .. 2782305 -  -5.4  -3.15579   TTAACCTTTCACTAA                 CTTC AGG GAAG                 CGTCAACTAAAACTT  52 62
 CHQ57_12755 2780521 .. 2780545 - -20.1  -3.63991   CATGACGCCCAACAA          CAAGGGGAGCC ATT GGCTCCCCTTG          TTGTTGCTGTTGATC 100 60
 CHQ57_12735 2776434 .. 2776464 - -18.4   -3.1994   GACAGGATTTACCAA       CCATTCAGGCTCCC GAT GGGAGCCTGAATTG       TTTATGGCAGCAAAG 100 43
 CHQ57_12700 2769078 .. 2769097 -   -15  -3.45023   CCACCACCATGACAA            CAGCCCCG CCAG CGGGGCTG             TTGCTTTTTTGATGG 100 53
 CHQ57_12680 2763734 .. 2763762 - -11.1  -3.06796   GTTTACTCCAGGTAA       CAGGCATGG-GC GGTTTT GCACCATGCCTG        TAGAGATGTCAGGGG  72 55
        araG NONE
        araH 2761122 .. 2761140 - -11.7  -3.91332   AGGACCAGACAACAA             GGCCAGC GAGAT GCTGGCC             TGAGATGGCGTGAGA  90 50
 CHQ57_12665 2760001 .. 2760039 - -20.4  -3.21962   ACACCAGCAAGTCAA   TCGGCAAACAGGGACGTC AGT GACGTCCCTGTTTGCGGC   CAATACCTGATGTCC 100 88
 CHQ57_12645 2755197 .. 2755221 -  -8.6  -5.47431   GGAAGAGACAAAAAA         GGCAAGG-CGC CTTG ACGGCCTTGCC          TGATGACTTATCGAC 100 61
 CHQ57_12640 2753450 .. 2753466 - -13.7  -5.24129   GTCCGGGACAAAAAA              GGGAGCC AAT GGCTCCC              TGATTGTTCAACCTG 100 49
 CHQ57_12635 2752237 .. 2752258 -    -8  -2.65264   TCACCACTGATAGCA           GGGGGA-GC TCTTG GCATCCCCC           TGCGCTTCAAACAAG  56 43
 CHQ57_12615 2747895 .. 2747911 -  -2.1  -2.83715   GGCAGTACTATCACA              TTGGGCC TAA GGCCAGA              GCACCTGGTTCCTGG  40 354
 CHQ57_12600 NONE
 CHQ57_12595 NONE
 CHQ57_12590 2741738 .. 2741767 -  -3.4  -2.67973   ATATAATGGACATCA       TCGCCGACGGGC ACACAG GCCCGCCGATCA        TGGGTGACTAGTTGA  40 33
 CHQ57_12585 2739623 .. 2739645 - -14.2  -4.62203   GGGAAATAATCAAAA           GAACCCGTCT ACA AGACGGGCTC           GGGGTTTACTGAACC 100 31
 CHQ57_12580 2739222 .. 2739233 -  -3.6  -2.72049   CAGACTCGCTAACCA                GCAC TATC GCGC                 CGGATCACATTATTC  43 35
 CHQ57_12575 2737598 .. 2737626 - -20.4  -4.20918   TCGAAGGGCAATAAA        GAAGACGCCGGC TTGAG GCCGGCGTCTTC        TTCACTATGGGTTTA 100 48
 CHQ57_12560 2736545 .. 2736561 - -13.7  -4.64844   GCCAGATACAGAAAA              CGCAGCC CAG GGCTGCG              TTTCATTTGATCCGA 100 98
 CHQ57_12530 2728988 .. 2729026 - -17.7  -3.02511   CTGACGGCTTGAATA  CAATAAAAACGGGCTCCC CGAT GGGAGCCCGTTTT-ATCG   CTTGTCATGCATGTC 100 47
 CHQ57_12520 2725602 .. 2725617 - -11.8   -5.4833   GCAGCCAATAAAAAA              GGCGCC TTTC GGCGCC               TTTTTTCACATCATC 100 47
 CHQ57_12500 2722444 .. 2722457 -  -2.4  -2.58579   CGAATGTTGCAGAAT               TGGT TACCAT ACCA                GTACCCCCGCCAATA  38 15
        sdhD NONE
 CHQ57_12490 2720250 .. 2720272 - -10.6  -3.21924   GCACCTTGGAGAAGA           GAGATGGGAA TGC CTCCCACCTC           TTCACAGACCGGCGA  74 94
        sdhB 2719419 .. 2719448 - -12.9  -3.55444   CTTGTAGGGTTTAAA       TAGCCATCCAGCC ATGG GGTCGGATGGCTA        TCCAGAGGTCGGGCC  90 67
        sucA NONE
 CHQ57_12475 NONE
 CHQ57_12470 NONE
 CHQ57_12465 2713127 .. 2713163 - -17.5   -3.5944   ACCTATATTTTCAAA    CCATAAAAATGCCGCCC ATT GGGCGGCATTTTTATTA    GAGATAACAGGCTAA 100 46
 CHQ57_12455 2711234 .. 2711257 -  -4.6  -3.20573   TCAGGCACAGCAACA          CCTGGCATAT GGTG ACATACCAAG           AGTTTGCTATGAGGC  49 54
 CHQ57_12450 2710381 .. 2710421 - -24.1  -2.88579   GCAAGCCGCCAGATA  GCAGCAGGGGCAGAAGAGT ATC ACTCCCCTGCCCCTGCAGC  ATATCAACAGCACTG 100 72
         asd 2703235 .. 2703254 -   -15  -5.73672   AAAGAAGCAAAAAAA            CAGGGGGC CTGA GCCCCCTG             TCCTTTCATTATCCA 100 54
 CHQ57_12425 2699794 .. 2699826 -   -25  -3.92641   AATCTGACGTACAAA      GAGCCCGCCCCATC GCTGT GATGGGGCGGGCTC      TTTTATGGCTGCCTG 100 85
 CHQ57_12405 2695264 .. 2695291 - -21.4  -2.75957   GATCAAGGCGAATGA        CAGAGGGCAGCC AACC GGCTGCCCTCTG         TGTTTGCAAGTCGGG 100 62
 CHQ57_12395 2693124 .. 2693140 -  -6.5  -3.71291   AAGAAGGGCAAAAGA              GGGGC AAGAAAA GCCCC              ATTCGAAGACCGGTC  63 184
 CHQ57_12390 NONE
 CHQ57_12385 2689968 .. 2689984 - -15.1  -5.04987   AAGAGGCGTAAAAAA              GCCGCCC CTG GGGCGGC              TTGCGATGAGTCGGG 100 52
 CHQ57_12375 2686419 .. 2686446 - -14.2  -5.08088   AAGCGGCAACAAAAA        CAGAGGGAAGGC TTGC GCCTTCCCTCTT         TCGTTATGCCCGTTC 100 127
 CHQ57_12370 2685501 .. 2685520 -    -7  -4.07568   CCCTTGGCGTTAAAA            CGGGCGGC CAAA GCCAGCCG             TTTTAACGCCAGGCC  70 97
 CHQ57_12355 2681312 .. 2681335 - -12.5  -4.64844   GCCAGACACACAAAA          GAGGGAGTG CATGGT CACTCCCTC           TTTGCATTTAGCCAC 100 43
        tnaA 2676295 .. 2676319 - -22.9  -4.87318   CCCAAAATGTAAAAA          GCCCCCGCACC ACT GGTGCGGGGGC          TTTGCTGTTGCGTGG 100 72
 CHQ57_12265 2659223 .. 2659255 - -17.9  -3.57144   CCGCCGATCCCCAAA      TTTGCCGTCTGGAAA TGA TGTCCAGACGGCAAA      AATGCGATCAATAAC 100 33
 CHQ57_12255 NONE
 CHQ57_12250 2655629 .. 2655646 - -12.7  -4.86621   ACCCGCAATGAAAAA             GAGCGCC AAAG GGCGCTC              TTTTTCATGACATCA 100 80
 CHQ57_12210 2645800 .. 2645817 - -10.5  -2.88579   GGAAGCCCTGATAGA             GACGGCG CATG CGCCGCC              AGATGAGCCAGCGTT  71 59
 CHQ57_12205 2645431 .. 2645449 -  -6.6  -3.21199   TACTCATGAAGTGAA             CGGCGTGG AGT CTACGCCA             ATGCATTCAGGGTCA  57 161
 CHQ57_12200 2644702 .. 2644720 - -14.6  -5.24796   TTCACACAATAAAAA             TGGGAGCC AGT GGCTCCCA             TTTTTATGACCTGCC 100 60
 CHQ57_12185 2640915 .. 2640930 - -11.8  -4.62622   TCAACCATAAAGAAA              CGCGCC AAAA GGCGCG               TTTTCTCTTTGCATC 100 46
 CHQ57_12165 2634556 .. 2634567 -  -2.2  -4.95302   GTAAACAGAACAAAA                GTAG TGAT CCAC                 TCTTTTCAGGGTAAG  71 175
 CHQ57_12155 2630477 .. 2630494 - -12.7  -5.76633   GCACACATAAAAAAA             CGCCCTC ACAA GAGGGCG              TTTTCAATGGTTTGA 100 53
 CHQ57_12135 2624619 .. 2624636 -  -8.4  -4.99035   GGAGCGATAGAAAAA             GGCGAC ACAAAG GTCGCC              TTTTTACTCTGTCAC  93 126
 CHQ57_12125 NONE
 CHQ57_12120 NONE
 CHQ57_12115 NONE
 CHQ57_12110 2620620 .. 2620638 -   -16  -5.27335   CCCTTGAAACAAAAA             GCCCTCGC ATT GCGAGGGC             TTTTTCATATCAAGA 100 46
 CHQ57_12095 2615593 .. 2615612 -   -15  -3.22448   GGAAACGTAATGCAA            TCGCCCCC AGAA GGGGGCGA             TACGAGAGGGTCATG  95 85
 CHQ57_12090 NONE
 CHQ57_12085 2611783 .. 2611797 -  -2.8  -3.65201   GAAGAGGCCGAACAA               GGAC TCGAAAG GTCC               AACCAACTAACATAA  51 194
 CHQ57_12070 2610451 .. 2610462 -  -3.6  -3.14211   AGTGCGGGTCAGCAA                GCGG GCTT CCAC                 TGTGTCCGGCAGTTG  47 144
 CHQ57_12050 NONE
        lolD 2603748 .. 2603760 -  -6.9  -2.73875   GCGGTTTGAACATCA                GGCGA CCT CCGCC                ATGATGCCGCTCACC  53 10
 CHQ57_12040 2602438 .. 2602474 - -24.6  -4.18094   CAAACCACCTGAAAA   CAGAAGGGCCCGCCGGT TTGC ACCGGCGGGCCCTTC-G    TTATGTATCGGCAGC 100 55
 CHQ57_12025 2600895 .. 2600905 -  -6.8  -2.52543   ACCTCGTTCAACTCA                 GCAC TGT GTGC                 TGACCCTTATTGCCC  52 32
 CHQ57_12020 2599500 .. 2599526 - -10.1  -5.07652   GTCCCTAAAATAAAA         TGGCCCGAGTG GAGAT CACACGAGCCA         TTATACTTAACAGTC 100 62
        clpP 2598846 .. 2598871 -  -9.7  -2.82635   ATGTCCAGGACGATA         CCGGAGCTCAGC CGC GCTG-GCTCAGG         ATACCGTCAACCAGG  67 7
        clpX 2597405 .. 2597429 - -14.4  -3.24823   AATCGGTAAAAAGCA          TGAAAGGGGC AAAAA GCCCCTTTCA          TTTGATTAAAAATCA  95 46
 CHQ57_12005 2594820 .. 2594833 -  -5.9  -2.61602   GCAAGTGACAATCTA               GCGCA AACC CGCGC                CACATCACGCATTGC  50 146
 CHQ57_12000 2594335 .. 2594356 - -13.7  -4.62203   CGTAAATAATGAAAA           GGCGCACCG ATTG CGATGCGCC            TTGGTCAATCAGTAT 100 110
 CHQ57_11995 2592330 .. 2592348 - -13.8  -5.71712   TCGCAGATAAAAAAA             CGGCCCCA TGA CGGGGCCG             CTTTCAATGGGTTGC 100 53
 CHQ57_11985 2589804 .. 2589826 - -10.5  -2.50991   ATGGAAATAAAGGAG           GCGGCAGAC ATCCA GTCGGCCGC           GGTGGCCATGCCGTT  69 181
 CHQ57_11975 2587880 .. 2587894 -  -6.4   -2.6462   CATGTAGGCAAAGAT               CAGCAC GCA GTACTG               GGCAACCTGGGTGTA  50 319
 CHQ57_11965 NONE
 CHQ57_11960 NONE
 CHQ57_11955 2583236 .. 2583253 - -11.3  -4.96646   CGACACAACGAAAAA             TGGCAGC CTCG GCTGCCA              TTTTCTTTTGCTGTA 100 66
 CHQ57_11945 NONE
 CHQ57_11940 2580087 .. 2580102 - -10.4  -4.61231   TCAGATTGTGAAAAA              GGCACC TTCG GGTGCC               TTTTTGCTATTCAGA  95 64
        mmsA NONE
 CHQ57_11885 2564788 .. 2564804 - -10.1  -2.53015   ACAGGGTTGAATGGA              GCCAACC TTC GGCTGGC              TCACAAAGCCTGATG  65 159
 CHQ57_11880 NONE
 CHQ57_11875 NONE
        mmsB NONE
        fabG 2560960 .. 2560985 - -11.9  -5.19328   AGCGTACAATAAAAA         TGCCCCTGTACC AGC GGC-CAGGGGCA         TCTAGTGGTGGACGA 100 46
        arcD 2559146 .. 2559167 - -14.5  -5.61596   ACGCGCATAAAAAAA           GAGATGGCC CTTG GGCCATCTC            TTCATTGTGCCGGTT 100 39
 CHQ57_11855 2558193 .. 2558208 -  -3.2  -2.64973   ATCAATGCGAGAGGA              CCAATG GGAC CACCGG               CGAGGAGAATAGCAA  40 117
         ffs 2558092 .. 2558110 -  -5.9  -4.67234   ATTGAATTCCAAAAA             CAGGTGG TGGCC CCACCAG             CCACATCCCGGCACT  77 17
 CHQ57_11845 2556683 .. 2556704 - -11.5  -3.17392   CATCGTGTAACCCAA           TGAGGGGCC TGTA GGCCCCTCT            GCTGTTTTTGATTTC  77 219
 CHQ57_11835 NONE
 CHQ57_11830 2549636 .. 2549646 -  -3.2  -3.03159   TGAACGGGGCCAACA                 CTAG GCC CCAG                 ATCGCTATCTTATTG  43 47
 CHQ57_11825 NONE
 CHQ57_11820 2545225 .. 2545256 -  -9.6  -2.62184   CGTTGGTTGAGATGA      TGGATCATTATGGCT ACG AGCCG-AATGATCCA      GATGCTCTACCTCCA  62 348
 CHQ57_11815 NONE
 CHQ57_11810 2543372 .. 2543397 - -12.6  -4.65153   TGATACAAATGAAAA         CGGGCCGCTCC GTGAT GGAG-GGCCCG         CAAGGGGGGTCAGCC 100 380
 CHQ57_11805 2542642 .. 2542657 -    -4  -2.78463   ACCGTTTTCATGAGA              GT-GGAC ATT GTCCTAC              ATGCCTATGATTCCA  43 30
 CHQ57_11800 2541058 .. 2541076 - -11.7  -4.61527   AAAACCTGCTAAAAA             GGAGCCC GGCAA GGGCTCC             CTGGGTTGTTATTAG 100 37
         ffs 2540257 .. 2540275 -  -5.9   -3.9279   ATTGAATTGCAGAAA             CAGGTGG TGGCC CCACCAG             CCACATCCCGGCACT  65 17
 CHQ57_11780 2538576 .. 2538588 -  -9.1  -3.45571   GGCTGGAAACACCAA                GTCGC TCG GCGAC                CTCTGCCACTGGGTA  71 488
 CHQ57_11745 NONE
 CHQ57_11740 NONE
 CHQ57_11735 2533550 .. 2533562 -  -9.1  -3.98683   AGCACATGAATGAAA                CCACC AAG GGTGG                TGGCTGTTACCAGAC  78 195
 CHQ57_11730 2532661 .. 2532679 -   -11  -5.09685   CAATAGATATAAAAA             TGCTCCCG GAG CAGGAGCA             TAAATTCAACGTTCG 100 191
 CHQ57_11725 2531192 .. 2531204 -  -2.6  -4.87318   CGGAAAATCGAAAAA                CCAG CAAAC CCGG                GCTTTTCAAGCGGCA  75 97
 CHQ57_11685 2521921 .. 2521946 -  -4.7  -3.03443   TTACCACTATAGAGA         GC-CCGACCAGA GCA TCTGACCAGAGC         ATCTGACCACAGATG  48 68
 CHQ57_11680 NONE
 CHQ57_11675 2519919 .. 2519942 - -18.2  -5.71712   TCCCAGACAAAAAAA          GAGAGGGCGC CCAG GCGCCCTCTC           TTTCTCTCCGATATC 100 39
 CHQ57_11665 2517721 .. 2517743 -   -17  -5.40625   ACAGCAGACAAAAAA           GCGCTCCACC CAT GGCGGAGCGC           CCTCACTACTTCTGG 100 118
        msbB 2516539 .. 2516554 - -10.4  -5.10461   CGTAGCCAATAAAAA              TGGCCC CGCA GGGCCA               TGATCACGATGGCAG 100 42
 CHQ57_11655 2515300 .. 2515312 -  -6.9  -3.17146   GCGCCTCAGAAGATA                GCCCC TAT GAGGC                CGGCTTGCATATCCC  57 155
 CHQ57_11650 2514345 .. 2514374 - -18.7  -3.92641   AACGGTAGCCATAAA       CAACATGAGCGCC CGAA GGCGCCCATGTTG        TGACTGATGACGTGA 100 54
 CHQ57_11630 2509080 .. 2509098 -   -16  -5.23316   CACCAGATTAAAAAA             GCCCGCTC CAT GAGCGGGC             TTTTTGCATGTCAGG 100 187
 CHQ57_11585 2504834 .. 2504852 -   -16  -4.45544   TTCGAGCAATCAAAA             GGGCCTGC AAT GCAGGCCC             TTTTCCATGGTATGT 100 59
 CHQ57_11560 2500658 .. 2500681 - -16.8  -4.14627   CCTGCATAGAAACAA          CAACGCAGCC CTTG GGCTGCGTTG           TTTTGTTTGGTACGG 100 58
 CHQ57_11535 NONE
 CHQ57_11530 2496788 .. 2496802 - -12.8  -5.30686   AACAGGCATAAAAAA               GGCGCC CTC GGCGCC               TTTCTCTTTTCTGGT 100 51
 CHQ57_11495 NONE
 CHQ57_11490 2491507 .. 2491538 -   -16  -4.56775   AGTGTTTGCCAAAAA      CACAAAAAGGCGGG AATT CCCGCCTTTTTGTT       GCCTGCTATTTGGAG 100 146
 CHQ57_11470 2486401 .. 2486416 - -11.8  -4.60949   GACACCATAAAGAAA              GGGGCC GGCA GGCCCC               TTTGTCATTGACTCG 100 53
 CHQ57_11460 2484614 .. 2484638 -  -5.7  -3.76048   GCTCAATGAAGAGAA         GGTCAGCCAG CTCTAT CTGGCCG-CC          ACCGCCTGGGTCAAT  60 70
        fadI NONE
 CHQ57_11395 2468538 .. 2468565 - -17.1  -4.76892   ATAGCAATGCAAAAA        GACCCCCCTCA TGTCAT TGAGGGGGGTC         TTTTGTTATCCGGGG 100 108
 CHQ57_11385 NONE
 CHQ57_11380 2464516 .. 2464540 - -14.3  -3.81951   CTCTATATCATGAAA          GGAGGGAGGCA ATA TGCCTCCCTCT          TGCCGTCCAACCAGA 100 99
 CHQ57_11375 2463624 .. 2463636 -  -6.2  -3.10255   ACAAGATGGATCCAA                GCCG TTCTT CGGC                CAGATTTCGCATCAG  53 279
 CHQ57_11370 NONE
 CHQ57_11365 2462861 .. 2462909 - -13.4  -3.51778   TGACCACACCAAAGA CTCCCCGCGTCAGACCTGAAT GATGTTGA ATTCAGGTCTGACGCA-GCAG CACAGCTAACCGGGC  90 8
 CHQ57_11350 NONE
 CHQ57_11345 2458652 .. 2458675 - -16.8  -4.40298   ACGCAAACCAATAAA          GAAGGCGACC TTGA GGTCGCCTTC           TTGCTCTGTTATTGA 100 91
 CHQ57_11335 2455985 .. 2456005 -   -14  -4.64846   CCAGAAATGACAAAA            GCCCTGCC GGATT GGCAGGGC            TTTTTACATCAACCG 100 70
 CHQ57_11310 NONE
        pfkB NONE
 CHQ57_11300 2447889 .. 2447920 -   -13  -3.96624   TACCCCCATCAGAAA      CAGACAAGGCGACC CGCA GGTCGCCTTGTCAT       TTACACCCTTGACGT 100 43
 CHQ57_11290 2446104 .. 2446130 - -13.7  -4.64591   TAAGCACATACAAAA         GAGCCGCCGGA TTGCC TCCGGCGGCTT         TTTCTTTGGCGCCGC 100 180
 CHQ57_11260 2437093 .. 2437137 - -13.8  -4.48221   CAGTAAGGCACAAAA CAGCAAT-AAAAAGAGCGACC CAAG GGTCGCTCTTTTTCATGGCGG CAAACGCGCGATTAT 100 37
 CHQ57_11250 2434595 .. 2434605 -  -2.4  -2.87132   GTGTTTCCTTATACA                 GTGG TGC CCCC                 TACCAAAGGGCACAT  41 232
 CHQ57_11245 NONE
 CHQ57_11240 2432041 .. 2432051 -  -6.8  -4.79352   TGAGTGACAACAAAA                 TCGC AAG GCGA                 ACCAACTCATGGGCG  85 70
 CHQ57_11235 NONE
 CHQ57_11230 2431399 .. 2431414 - -10.4  -5.60689   GCAGATAACAAAAAA              GGAGGC CTGA GCCTCC               TTTTATCTTTCATAA 100 51
 CHQ57_11225 NONE
 CHQ57_11220 2427726 .. 2427736 -  -3.2    -3.322   AGCGCCATAGATCAA                 TCCC TCA AGGA                 TGCATTCAACTCTTC  47 11
        ihfA 2427398 .. 2427415 - -12.7  -4.80167   CATGAAAAAGTAAAA             GCCAGGC GTTT GCCTGGC              TTTTTGTCACTCGTT 100 32
 CHQ57_11205 2422146 .. 2422170 - -14.9  -3.14468   GGCCAGCAGAGGTAA          CGGGGCACGGG TTA CCAGCGCCCCG          TCATGCCGCGATCGC  95 12
 CHQ57_11200 2421506 .. 2421530 -  -7.1  -2.79796   GCTGACCTTAGCACA          GGCTGAAAAGG CAG CCTATTCACCC          TTGGTCTTATGAGGA  53 49
 CHQ57_11195 NONE
 CHQ57_11190 NONE
 CHQ57_11185 2418437 .. 2418457 - -14.7  -4.67755   AGACGCATGCAAAAA            GGGCGACCC ATG GGATCGCCC            TTTTTATCGCAGCCC 100 42
 CHQ57_11145 NONE
 CHQ57_11140 2409821 .. 2409837 - -13.7  -4.86621   ATCTGCAACGAAAAA              GGAGCGC CTG GCGCTCC              TTTTTATCTTTTTGG 100 53
 CHQ57_11080 NONE
 CHQ57_11075 2398222 .. 2398247 -  -4.7  -4.49353   GCACAACACAACAAA         GGCCCCA TTATAGAGAGCT TGGGGCC          TTTTGCGAACCATCT  70 50
 CHQ57_11070 NONE
 CHQ57_11065 2395463 .. 2395480 - -12.7  -4.68908   TTCAGGCAAAAGAAA             GGGCGAC CTGA GTCGCCC              TTGTGTACCTGTTAT 100 54
 CHQ57_11055 2391532 .. 2391542 -  -6.8  -3.14564   CCATCGCCTGACGAA                 CCTC ACT GAGG                 ACATCGGTCGGTAAC  57 44
 CHQ57_11050 2391173 .. 2391199 - -20.2  -5.06414   TGTTTGCAACAAAAA         GGGCAGGAGAGC CAG GCTCCCCTGCCC         CGTCAACACTTACTG 100 35
 CHQ57_11045 2390795 .. 2390805 -  -2.4  -5.06052   GCAAAAAACAGAAAA                 TCCC ACT GGGT                 GATTACGGATTTACC  74 94
 CHQ57_11040 2385725 .. 2385745 - -15.4  -5.00616   TTGCTCCTTAAAAAA            GCCCCGGC AACTG GCCGGGGC            TTTCGGGGTTATGCC 100 34
 CHQ57_11035 2384629 .. 2384641 -  -4.8  -3.64703   GTGCCCTTACTGAAA                GTCG TTACT CGAC                TTTATTCCATGTCGA  55 81
 CHQ57_11030 NONE
 CHQ57_11025 NONE
 CHQ57_11020 2380851 .. 2380876 -  -5.4  -5.15634   TACCTGATGAAAAAA         GCGGGGCCAGA TACTC TCTGCCCCC-C         TTTTTCTCTATTCGT  83 43
 CHQ57_11015 NONE
 CHQ57_11010 2377138 .. 2377160 -  -9.9   -5.7946   CGTGGAACAAAAAAA           GCGACCAAT TTTTC ATCGGTCGC           TTTCATCTTTACCCC 100 134
 CHQ57_11005 2376882 .. 2376898 - -10.8  -3.84394   CAGAGATAACGTAAA              GGGGCC TCAAT GGCCCC              TTTCCTTTTGTAATG  84 57
 CHQ57_10980 2370988 .. 2371007 - -13.6  -3.51406   GAGCACAAACACCAA            GGGCCTGA ACAA TCAGGCCC             TTTTCGTTTCTGGCT  95 18
 CHQ57_10970 2368089 .. 2368115 - -11.6   -4.4078   CCTTCTCAAGCAAAA        CCGGCCCA-GC AAGAGG GCATGGGCCGG         TCAATCACTATGCCA  95 66
 CHQ57_10965 NONE
 CHQ57_10960 NONE
 CHQ57_10955 2365349 .. 2365372 - -16.8  -4.75288   TTACAGGAAAACAAA          GAGGCCAACC CTTG GGTTGGCCTC           TTTCATGGCCACAAA 100 47
 CHQ57_10940 2362183 .. 2362207 - -12.8  -3.57406   TCCCCACCAGAAATA          GACGCGGGCC GCAGG GGCCCGCTTC          TTATTGGAGCGTCAC  88 51
 CHQ57_10920 NONE
 CHQ57_10915 2357264 .. 2357275 -  -4.4  -3.39261   CAAACAAATCATCAA                CAAG TCAC CTTG                 TCCAAAACAGAAAGG  51 59
 CHQ57_10910 2354613 .. 2354632 - -12.1  -5.47159   CGGCAACATAAAAAA            GCCCGGC GTCATG GCCGGGC             TGGTGTGATAGGAGA 100 48
 CHQ57_10905 2352924 .. 2352950 - -11.6  -5.71712   CCGGACATAAAAAAA         GCCAGGTACGAA TTC CTTGTACCTGGC         ATAGGGGAATTGGCT 100 168
 CHQ57_10825 2339769 .. 2339786 - -10.5  -3.92804   GAATAAATGACGAAA             CGGGAGC CTGG GCCCCCG              TTGTTCGTTTAGCTC  86 62
 CHQ57_10810 2334483 .. 2334503 - -15.5  -5.67063   TTGAGGATAAAAAAA            GAGCCACAC ACT GTGTGGCTC            TTTTTTCTATCAGGC 100 55
        metG 2327153 .. 2327172 - -13.6  -5.28826   AAATGGCATAAAAAA            GAGAGGCC AGAT GGCCTCTC             TTCTCATGGGGGGCA 100 51
 CHQ57_10780 2326334 .. 2326354 -   -14  -4.87665   TGCCACGCATAAAAA            CGGGAGCC ATCGG GGCTCCCG            TTTGCCTATGTTGGC 100 42
 CHQ57_10770 2324425 .. 2324447 -   -12  -5.27023   ATGGTAAAAAGAAAA           GGGGCCACAT TCT ATGTGGCCCG           CTGGTAAAACTCAAA 100 90
 CHQ57_10765 2323157 .. 2323179 - -19.2  -4.60041   AGCGATGCCTAAAAA           TCAGGCCCGC AAT GCGGGCCTGA           TTGATCAAAGGGAAC 100 53
 CHQ57_10760 2321496 .. 2321520 - -14.3  -3.16055   TAAATCCGGTATCAA          GGGGCCACCTT CTT AAGGTGGCTCC          TTTTTCAGGTTATTG  89 185
 CHQ57_10750 NONE
 CHQ57_10745 NONE
 CHQ57_10740 2317589 .. 2317611 - -19.2  -3.80114   CAGCAAGTCATGAAA           GAGGGCGACC CCG GGTCGCCCTC           TTGGCGTCAGTGGCA 100 54
 CHQ57_10710 2308530 .. 2308551 - -15.9  -4.27316   GCCCCTAAGCCAAAA           GAAGGCGCC CTCG GGCGCCTTC            TTGGTTTATGCACGC 100 76
 CHQ57_10685 NONE
 CHQ57_10680 2302134 .. 2302153 - -12.2  -3.07344   CCAGCCGGGAAGAGA            GGATGCAC GAAT GTGCATCC             CTTAGAGTTCGTGAG  79 27
 CHQ57_10675 2301271 .. 2301286 - -10.4  -3.29568   ACACCAAAAGAGAGA              TGGGCC GCTG GGCCCA               TTTTTTATATCTGCC  72 41
 CHQ57_10635 NONE
        hisD NONE
 CHQ57_10625 NONE
 CHQ57_10620 2288770 .. 2288786 -  -5.1  -3.28714   ATATCCATCACAATA              CCCCT TTGCTGG AGGGG              AGCTCGCTCCCTTCC  54 1
        hisH NONE
        hisA 2287211 .. 2287227 -  -2.3  -3.16971   CGAGTATAGAGTCAA              TTGTTAC CGA GTAATAA              GGACTTACCTCGACC  43 102
 CHQ57_10605 NONE
 CHQ57_10600 2283911 .. 2283921 -  -6.8  -2.80113   GACCAGCTCATCATA                 GGAG TTC CTCC                 GGCGGAGTGGGGGCC  53 10
 CHQ57_10595 2279870 .. 2279882 -  -3.3  -3.03124   CGGCATGCTTCAACA                GGTGG TGC CCAGC                CGGGCGAAAACGTGG  43 93
        hisF NONE
 CHQ57_10585 2278323 .. 2278354 - -18.8  -3.36968   GACTGAATGTCATAA      GGAGAAACGGGCCC ATCA GGGCCCGTTTCTCA       CATCGGTTTACGATC 100 39
 CHQ57_10565 2273132 .. 2273160 - -21.7  -2.87931   GCCAGGCCGCATAGA        GAGCGCCCGGCAC TGT GGGCCGGGCGCTC        TCTGGTGAGGTTAGC 100 42
 CHQ57_10555 2271809 .. 2271829 - -12.6  -5.06414   CGTGCGCAATAAAAA            GGCCCATC GCTAT GATGGGCC            TTCGTTTGGCGCAGG 100 58
 CHQ57_10545 2266449 .. 2266477 -  -9.7  -2.50195   AGGGATGACGAAGAG       GGAC-TTCCCGA TTCGGG TCGGGAAAGTCC        GGCCCGTCAGGTTCA  65 49
 CHQ57_10540 NONE
 CHQ57_10535 2264216 .. 2264235 -  -6.4  -3.23216   GCCCAGCAGCACGAA            GCCTAATG ATCG CACCAGGC             AACCCCAGACGATGG  54 360
 CHQ57_10510 2260653 .. 2260674 - -10.1  -5.95539   GCGGAAATAAAAAAA           CCGCCAGAT AACA ATCAGGCGG            TTTTTTTATCATGCC 100 46
 CHQ57_10490 2256553 .. 2256567 -  -9.2   -2.8805   ACGAGTGCTTAGAGA               GCGGCC ACG AGCCGC               TCTTTTGCTTTCTTG  65 58
 CHQ57_10435 2244066 .. 2244080 -  -2.8  -3.31269   GCGACATTATATGAA               TTGAAC CGA GCCCAA               GATAGCTGACCCGGC  47 103
 CHQ57_10430 2243236 .. 2243254 -   -16  -3.15638   AAAAGCGATATGCAA             GAGGGGGC CAA GCCCCCTC             TTGGGCAACAGCTTA 100 38
        pfkA 2242099 .. 2242113 - -11.4  -5.14965   AGGCGGATTAAAAAA               CCCTCC AGC GGAGGG               TTTTTGTCACAACAA 100 61
 CHQ57_10410 2239415 .. 2239447 - -20.8  -2.88544   GCGGATCGCCAGACA      CACAAAAGGCAGCC ATCAA GGCTGCCTTTTGTG      ATCTTGAGGGGATCA 100 38
        glgX 2233189 .. 2233225 - -20.3  -3.14602   CGCACTGCATGAATA    GAAAAGCCCACCCCGAG TCA CTCAGGGTGGGCTTTTT    GATGGCCGCAACAGT 100 52
 CHQ57_10330 NONE
 CHQ57_10325 2227453 .. 2227478 -  -4.7  -3.14683   AGATCTGCTTATCAA         CCCGTGC TCTCTACTGCTT GCACGGG          GTTATTGACTCGGCC  49 27
 CHQ57_10310 2225058 .. 2225087 - -22.3  -3.21218   ATGGTTTACCAGCAA       CAACAGAGGGGCC CGCA GGCCCCTCTGTTG        TTTGCAGCTTGTCCA 100 43
 CHQ57_10295 2222312 .. 2222344 - -12.8  -2.70932   CCTTGGGCTCAACGA     GTGACAGG-CATGCG CTGA CGCCTGGCCTGTCAC      AACATAAGACGCAGC  77 170
 CHQ57_10290 2220819 .. 2220830 -  -7.2  -5.65927   CACGCAAATAAAAAA                CCGC CGAG GCGG                 TTTTTTATTTTTCAG 100 63
 CHQ57_10265 NONE
 CHQ57_10260 NONE
 CHQ57_10255 2216331 .. 2216376 -  -8.9  -2.64218   ACGCCGCAGCACAAT GCGCCCTCCGGGGAAAGAGTGG GCG CCTTGCTTT-CCCGGAGGGCAT TCATCAGAGCTGCTT  59 29
 CHQ57_10250 2214951 .. 2214984 - -25.5  -3.33162   CAGTTCAGGCCACAA     CGAACAAGGCCAGCC GTCA GGCTGGCCTTGTTCG      TTGTCGATCATCAAG 100 56
 CHQ57_10245 2214582 .. 2214599 -  -9.1  -2.82834   GAGCCCATGATCACA             CGGCAGGC AGG GCC-GCCG             TGTTCACTCCCAACG  63 3
 CHQ57_10225 2211051 .. 2211067 -  -3.5  -3.01924   GATTGGTCTGCAACA              GCGCCTG CGC CGTGCGC              TCTGTCTGTGCCTTG  46 205
 CHQ57_10215 2208919 .. 2208948 - -19.3  -3.54743   CAGTATGAACGACAA       GCGTCAGCCCGGC GGGT GCCGGGCTGACTC        AGGGAGTGCAAGTAT 100 46
 CHQ57_10210 2208422 .. 2208461 -    -8  -3.18912   CCAGCTAGTCAGCAA CCGGCTCACTTGCACCTCC AGGCA GGAGG-G-AAGCG-GCCGG TCTTCTGGTTCGGTT  61 124
 CHQ57_10190 2203749 .. 2203767 - -14.6  -4.75308   AGGAAGATTGAAAAA             GACCGCCT TCG AGGCGGTC             TTTTTGTTTAGGCGG 100 49
 CHQ57_10170 2198585 .. 2198597 -  -3.3  -3.92659   GGCTGAAAAGTGAAA                GCGTG ATC CAGGC                CGACAAACCGGCAGG  55 307
 CHQ57_10150 2194068 .. 2194090 -  -5.5  -4.46215   TAGAGGTAAAAATAA          GCGAGC-CGC CGCC GCGTGCTTGC           ATGGCGGGGATCTGG  72 128
 CHQ57_10140 2192696 .. 2192712 - -10.8  -4.84642   GCCAAAGCAACAAAA              GGGGCG ATCTG CGCCCC              GGTTCTTTTTATGTC 100 149
 CHQ57_10110 NONE
 CHQ57_10105 NONE
 CHQ57_10100 2181638 .. 2181650 -  -6.9  -2.62613   GGGGATGGTAAAGAC                CCGCG GCT CACGG                CCTGTCGCCGTACTG  52 181
 CHQ57_10090 2179232 .. 2179255 -   -11  -4.52857   AGGGGGGAGATAAAA          CAGGGGCATT TTTC AGTGCCCCTG           TTTTTAGTCATCGGT  95 33
 CHQ57_10080 2175931 .. 2175950 -   -15  -5.09521   GCAAGAAACTAAAAA            GCGCGACC TCAT GGTCGCGC             TTTTGCTGAGTACAG 100 48
 CHQ57_10050 2168074 .. 2168099 -  -3.1  -2.51257   GCTCAAAAAAACAGC         GAGGTCGGATC AGCG GATCCGGCCGT          AAAAGTGACTGGCTG  40 188
        corA 2166871 .. 2166892 - -13.7  -3.43071   GGTGACACGAATTAA           TCGGGGGGC CAGT GCCCCCCAA            TCCATCGTCTCTTTT  95 62
 CHQ57_10040 2166118 .. 2166162 - -19.4  -3.14931   GCCAGGCTGGAGCAA GGCACCG-TCACCACGG-GGCA GAA TGCCACCGAGGTGAGCGGCGCC CCGGGTCAGTGGCTG  91 179
 CHQ57_10025 2161993 .. 2162012 -   -15  -4.93595   ATAAAAACGGAAAAA            GGGAGCCC GCTT GGGCTCCC             GAACAGGGGATTACA 100 36
 CHQ57_10020 NONE
 CHQ57_10015 NONE
 CHQ57_10010 2159019 .. 2159032 -  -8.1  -5.52986   ACGGGATCAAAAAAA               CCGTC ATCA GACGG                TTTTTTTGATCCTGC 100 43
 CHQ57_10000 2157094 .. 2157110 - -13.7  -5.61596   ACGTCCATAAAAAAA              GCCCGCA TAA TGCGGGC              TTCTTTCTGGCTGCC 100 55
 CHQ57_09995 2155582 .. 2155637 -  -8.9  -3.60296   TATGTGGAGGCCAAA GCCGGGGTGACCCTCAACCGCCTCGC CCTGC GCAAGG-GGTTGCAGGCCACGCTGCC GCACTACATGGTACC  68 195
 CHQ57_09955 2139261 .. 2139273 -  -4.7  -5.55769   CTTGAGAAGAAAAAA                CCGCG CCC CGGGG                GTTGAAGAGAAGAGG 100 56
 CHQ57_09950 2137101 .. 2137119 -   -16  -3.41878   CGTTGTAATGCATAA             GGGAGCCG AAT CGGCTCCC             TTTCTTTATGGTGTG 100 63
 CHQ57_09940 2133924 .. 2133947 -  -8.1  -3.99324   CGTTACGATCAGAAA          GAGCTGGAG CGCTAT CGCCAGCTC           AACGACATCATTCTG  69 33
 CHQ57_09915 2128148 .. 2128161 -  -4.5  -4.62069   GGCCGACCCGAAAAA               CCACC TCCC GGTGA                AGTGAACCCCATTTA  72 50
 CHQ57_09840 NONE
 CHQ57_09835 NONE
        hycD NONE
        hycE NONE
 CHQ57_09820 NONE
 CHQ57_09815 NONE
 CHQ57_09810 2105664 .. 2105676 -  -3.4  -4.27117   GGTCGAGAAGATAAA                CATC TCGGC GATG                GTTTCGGGAGGGATC  60 267
 CHQ57_09800 NONE
        selB NONE
        hypF NONE
 CHQ57_09785 NONE
 CHQ57_09780 NONE
        hypE 2096698 .. 2096708 -  -8.2  -3.57561   CTTTAATTGGGTAAA                 CGGC ATG GCCG                 ATCAACAGATCCGCG  69 27
        hypA NONE
        hypB 2095187 .. 2095212 - -11.1  -4.60797   GGTCCACAGATAAAA         GAGAGGGAGGC ATCA GCCCCCCTCTT          TTGCTATCCGCCGTT 100 61
 CHQ57_09705 NONE
         alr 2081513 .. 2081524 -  -7.2  -3.22777   GGTCACATAGGAAGA                GGGC TCAA GCCC                 CTGACAGCGACAATG  57 18
 CHQ57_09665 2072521 .. 2072542 - -10.1   -4.4267   GGTGAAAACGGAAAA           GGGCGCCTT TGGA AAGGCGCCA            CGGATAACGGTTTGA  90 49
 CHQ57_09660 2070646 .. 2070660 -  -5.8  -4.59376   AGGAGCAAATTAAAA               TAAAAC ATC GTTTTA               TGTTTTGTGATGTTG  77 58
 CHQ57_09655 NONE
        kduD 2068839 .. 2068856 - -12.7  -4.90381   CGCAAGAGAATAAAA             GGCGCCT GACG AGGCGCC              CTGAGGGTTAACGGG 100 33
 CHQ57_09645 2068234 .. 2068263 - -13.6  -3.98282   CCCAGATGAATTAAA       CATCCGGCCCCT GACGTA AGGGGCCGGATT        TTTTGTGGCTGCGGG 100 57
 CHQ57_09635 2065945 .. 2065972 -  -7.6  -3.13073   ATTGGCATGAAGAGA        GGGAGGCACCGT GCCG AGGGCGCCTCCG         GGCTATGGGGTTGCC  61 49
 CHQ57_09630 2064035 .. 2064048 -  -2.3   -3.1203   GAAGTAGTCAAGACA               GCCCA TCAG TGTGC                TCACTCTTTGATAAA  42 26
 CHQ57_09625 2063234 .. 2063275 - -27.7  -3.57144   TCCCTCACCGCCAAA TAACAGAAAAGGGCCTGTC GCAA GACAGGCCCTTTTCTGTTA  TTTGGCAATAGGAAC 100 98
 CHQ57_09615 2060680 .. 2060714 -  -2.8  -3.72027   AGCCTCCATGAAGAA     TTGTTCAGGAGTGCAA TTA TTGTTCTCGTGACCAA     TTTAGTCAATAGTCA  53 49
 CHQ57_09610 NONE
 CHQ57_09605 2056461 .. 2056475 -  -2.8  -2.57211   ACTTCCTCTCATAAT               GCAAAT ATT AATTGC               GAAACCTCAGCTACT  40 32
 CHQ57_09600 NONE
        fabF 2054253 .. 2054266 -  -6.7  -3.32698   TGACTCCAGATAACA               CGGTA GGGG TACCG                TTTTGTTATCCGGTT  59 105
 CHQ57_09590 2053109 .. 2053121 -  -7.7  -2.71483   ACACCTCCTGAATGA                CCTCA GTT TGAGG                CTCTTAAGGTGTCTA  57 97
 CHQ57_09585 2051509 .. 2051529 - -10.4   -3.3862   ATAAATAGCCCACAA            GCCCTGCC GACAA AGCAGGGC            TTTTTTCTGCCCGTC  72 435
 CHQ57_09550 2043459 .. 2043475 - -10.8  -2.59534   AGGAATGACAGCAAG              GGCGCC TCTAT GGCGCC              TTTTTTGTTGCCGCC  69 47
 CHQ57_09535 2040143 .. 2040157 - -11.4   -5.8187   CAGGCAATAAAAAAA               CCTCGC GCT GCGAGG               TTTTTTTATTGGTCG 100 53
        rrtA 2036590 .. 2036638 -    -6  -3.31144   CTGGCAGGGCGATAA GGTTTGAAGGGGACAGGCCGA TTGACCGC CCGGCCTGTCCTGTTCTA-CC GGCACGGCAGTCTGC  56 50
        ribA 2030374 .. 2030392 -   -16  -5.87996   GAATCAATAAAAAAA             CGCCTCCC GAT GGGAGGCG             TTTTTATGCCAGCGT 100 117
 CHQ57_09455 2026693 .. 2026704 -  -5.8  -3.57561   GCCGAACTGGCGAAA                CAGG GCAC CCTG                 CTGGTGGAAGGCATG  57 433
 CHQ57_09430 2021908 .. 2021930 -  -3.4  -4.64766   GGGAGACCTTAAAAA          GAGC-CGCC CGCCTT GGCAAGCTC           AATCCGGCGTTTAAT  68 36
 CHQ57_09425 NONE
 CHQ57_09420 NONE
 CHQ57_09415 2019357 .. 2019376 -   -15  -4.10552   TGCCATGAAATGAAA            CAGGGCGC TTCG GCGCCCTG             TTTTGTTACTGCATG 100 51
 CHQ57_09405 NONE
 CHQ57_09400 2013922 .. 2013956 - -15.8  -4.29472   CAAAGTAAAACTAAA     CGGCCTGAGCCCGGTA CAG TACCGAACTCAGACCA     TGTCATCCGCCAGCT 100 118
 CHQ57_09380 2010118 .. 2010138 - -12.6  -4.27316   CTCGTTAATGCAAAA            CGGCATGG GTTTT CCATGCCG            TTTTTGTTTGCGCGC  95 62
        glnQ NONE
 CHQ57_09360 NONE
 CHQ57_09355 NONE
 CHQ57_09350 NONE
 CHQ57_09345 NONE
 CHQ57_09340 NONE
 CHQ57_09335 NONE
 CHQ57_09330 2002839 .. 2002872 -  -6.7  -2.52543   ACGGGGCGTAATTTA     GGGGAAAG-GGCTGTC TGG GTCAACCACTTTTCCC     CTTATTTTTCATAAT  52 91
 CHQ57_09325 2002554 .. 2002569 - -10.4  -5.46698   CCCAAAAGCAAAAAA              CCGACC ATCA GGTCGG               TTCTTTTAAATTTGG 100 38
 CHQ57_09320 2002371 .. 2002386 - -10.4  -5.46698   CCCAAAAGCAAAAAA              CCGACC CTGA GGTCGG               CTGCTTCAGATTTGG 100 38
 CHQ57_09315 NONE
 CHQ57_09310 NONE
 CHQ57_09305 NONE
 CHQ57_09300 NONE
 CHQ57_09295 1997044 .. 1997058 -  -2.8  -3.58536   AAACCTATGGTGAAA               TCGG CTATTGC CCGA               TGCGCCTTGGCGCTT  51 39
 CHQ57_09290 1994265 .. 1994276 -  -2.2  -3.09635   AGGTCGATCAGGGAA                TCAC TCAT GCGA                 TGGCCTCCTGCAGGT  42 18
 CHQ57_09285 NONE
 CHQ57_09280 NONE
 CHQ57_09275 NONE
 CHQ57_09270 1991499 .. 1991511 -  -5.5  -3.99324   GGCCAGCACCAGAAA                CACCA TGC TGGCG                ATGAAGAGGTTGGTA  63 399
 CHQ57_09260 NONE
 CHQ57_09255 1986846 .. 1986872 - -19.6  -4.15657   TGACAATCACATAAA         TCCGAAACCAGC CAA GCTGGTTTCGGA         TTTTTTCACATCTGG 100 90
 CHQ57_09245 1983149 .. 1983175 - -19.6  -4.31433   TATGCGCATAAGAAA         TCCGAAACCAGC CAA GCTGGTTTCGGA         TTTTTTCATATCTGG 100 287
 CHQ57_09190 1970641 .. 1970667 - -20.2  -4.08706   CTGCCACCAGATAAA         CAAGGCCCCGCC AAC AGCGGGGCCTTG         TTGTTTCAGCGAGAG 100 45
 CHQ57_09180 1968276 .. 1968295 - -16.4  -4.92783   AAGGCACCATAAAAA            CGGCCGCC CTGG GGCGGCCG             TTTGCATCAGTGGTG 100 47
 CHQ57_09175 1967962 .. 1967993 -   -16  -4.37092   AGCCGCGGCACAAAA      GAAAAGGCCTTGTC GTTT GACAAGGCCTTTAC       CGGGGAATTTGGTCG 100 35
 CHQ57_09170 NONE
 CHQ57_09165 1965856 .. 1965875 - -16.4  -5.46276   AATACAGATAAAAAA            CGGCCCGC ATCA GCGGGCCG             TTCTGCTTTTCGTGG 100 47
         alr 1963917 .. 1963938 - -15.9  -3.37017   AACGGTGAATATGAA           GAGGGCTCC CGCG GGAGCCCTC            TTTGCTGGTGAGATT 100 49
 CHQ57_09110 1955105 .. 1955150 -  -2.5  -4.74132   AGAGTGGAGCAAAAA CGGGATGAATGGTGCGTGAACA GGG CGC-CACGCACCATTTTTCAAG CAGTTAGCACTATTA  68 21
 CHQ57_09105 1952134 .. 1952153 - -16.4  -5.76237   TAGACAAACAAAAAA            GCCCGCGC ATGT GCGCGGGC             TCTCGAGTTCAAGTC 100 47
 CHQ57_09100 1950804 .. 1950828 -   -13  -2.71011   AGGTTTGTCCAATGA          GTTATCCCCA GCTTT TGGGGATAAC          TCAGAAGGCAAAATA  81 26
 CHQ57_09095 NONE
 CHQ57_09090 1947950 .. 1947963 -  -9.5   -2.7634   AAGGGCAGGTGAAAC               GCGCC GAGC GGCGC                CATGGTGACTCGAGT  63 78
 CHQ57_09085 1946410 .. 1946432 - -19.2  -4.68593   CGGATGATCGAAAAA           GGGGGAGCCA ATT TGGCTCCCCC           TTTATTTGCAGCGTG 100 45
 CHQ57_09080 NONE
 CHQ57_09075 1944740 .. 1944768 - -26.1  -4.82901   TTGGCGCCACAAAAA        CAGCGGGCCGGCA TGA TGCCGGCCCGCTG        GGATCCCTTATTCTG 100 42
 CHQ57_09070 1942840 .. 1942863 -   -11  -2.63991   TCTAACTTAACGAAG          GGGTCGGTAG TGCG CTACCCACCC           TGATAATCACTATGT  69 85
        dacB 1941285 .. 1941308 -  -8.8  -2.52464   TCTCCGTTGAATTGA          GGCAGGGC ACAGCATA GCCCCGCC           TTGGTATCGATCAAA  58 89
 CHQ57_09060 1940964 .. 1940979 - -11.8  -5.67063   TTCACCATAAAAAAA              GGCGCC ATCA GGCGCC               TGTTTTCTATGGGGG 100 46
 CHQ57_09050 1939086 .. 1939101 - -10.4  -4.86133   GACAGATAGCAAAAA              GGCTCC CGAA GGAGCC               TTTTTCATGAGCCGT 100 43
 CHQ57_09035 1934519 .. 1934551 - -14.9  -2.69319   AACCTTCTACAGAAT      GGAACAAGCGACGAG CTC CCCGCCGCTTGTTGC      CTTACATCGCCATTC  90 45
 CHQ57_09020 NONE
 CHQ57_09015 NONE
 CHQ57_09010 NONE
 CHQ57_09005 NONE
 CHQ57_09000 NONE
 CHQ57_08995 NONE
 CHQ57_08990 1926232 .. 1926262 -  -8.2  -3.42574   GGAATCGCAGCAGAA       GTTTGCGGGCTGTA GCG TACAGCCTGCATGC       TGCCTTATTCCTGTG  67 30
        gloA 1925703 .. 1925718 - -10.4  -5.22312   ACTGAGATGAAAAAA              GAGCGC CGCA GCGCTC               TTTTTTTATTGGGTG 100 58
 CHQ57_08970 1921907 .. 1921928 - -14.5  -3.67611   CGTATCCCAATAGAA           GAAGGCTGC CATG GCAGCCTTC            TTGCTCGTTGCTTAT 100 37
 CHQ57_08965 NONE
 CHQ57_08960 1920320 .. 1920337 - -12.7  -4.45544   CTTTATCAATGAAAA             GGCGACC CCGA GGTCGCC              TTTTGCATGTCTGCA 100 54
 CHQ57_08925 1910059 .. 1910073 -  -2.1  -4.29106   TTTGACAGGAAGAAA               CGAAA GGTAA CTTCG               GGGGTTGTCCATGAT  58 168
 CHQ57_08920 1908348 .. 1908365 -  -6.9  -5.30686   AATAGCCATAAAAAA             GAGGTCC GATT GGCCCTC              TTTTTTGGTTGGTCG  95 54
 CHQ57_08915 1907027 .. 1907051 - -15.7  -5.07567   CCACACCCCAAAAAA          CGCGCCCGC ATCAATA GCGGGCGCG          TTTTACTGTGCGGCT 100 70
 CHQ57_08905 NONE
 CHQ57_08900 1903311 .. 1903339 - -18.9   -2.7035   GTGAGTGAGAGATGA        GAGTGCGGGGCCA TCC TGGCCCCGCATTC        GTTTAGTTTGTTTAA 100 52
 CHQ57_08895 1902852 .. 1902864 -  -4.8  -3.56836   AAATCATGCCGTAAA                CGTC AAGCA GACG                GGCAGATGGGTTGAG  55 70
        asnB 1900967 .. 1900988 - -11.6  -5.76949   GACGCGGAAAAAAAA           GCCCCTCA GCTGAG TGAGGGGC            TTGGCAGTGATGGAC 100 88
 CHQ57_08850 1892909 .. 1892942 - -21.2  -4.25104   GCGCTCCCACCAAAA     GCAACAAGGCCACC CATAGC GGTGGCCTTGTTGC      CTTGCACTGCCCTGC 100 106
 CHQ57_08830 NONE
 CHQ57_08825 1884457 .. 1884470 -  -5.9  -3.32946   TGCGCAAGCAGAACA               CCGCC GATC AGCGG                CCCGAGAGCCGCCCC  56 405
 CHQ57_08810 1882538 .. 1882553 - -11.8  -5.06816   AGGCTCCAATAAAAA              CCCCGC CGAA GCGGGG               TCTTTCATCAGTTGC 100 33
        yccS 1880219 .. 1880229 -  -6.8  -3.35996   GATGCTCAGCCATAA                 GAGG GCT CCTC                 GCAAATAGGGCTATC  59 39
 CHQ57_08800 1879838 .. 1879869 -  -6.6  -5.42131   CAATGAGATAAAAAA      TACCGCGCTTCATTT CAC AGATGG-GCGCGGTA      TTTTTTTAGATGCAT  95 31
 CHQ57_08760 1869824 .. 1869843 -   -15   -5.1356   TCGCACCAACAAAAA            CGGGCACC AGAA GGTGCCCG             TTTTTGTTGGCATGG 100 50
 CHQ57_08750 1867262 .. 1867280 -  -2.4  -3.29829   CACACCGGGGCAGAA             TGCCAA GCATTAT CTGGCA             GGCGTTCTCCACGCA  44 522
 CHQ57_08740 NONE
 CHQ57_08735 1865323 .. 1865339 - -15.1  -5.08088   AAGCGGCAATAAAAA              CGGCGCC AGT GGCGCCG              CGTTTTTGTGAGGTG 100 62
 CHQ57_08730 NONE
 CHQ57_08725 1862521 .. 1862541 - -18.3  -3.27475   CGCTCGAGCAGAAGA            GAGGGGGCC AGC GGCCCCCTC            GGTGTGTGCAAGATA 100 69
 CHQ57_08720 1859692 .. 1859720 - -11.8  -4.52589   TCCCGGTACAGAAAA       TGGGAGCGCACGT TAAC ACGC-CGCTCCCA        TCATTTTATGCTGTC 100 53
 CHQ57_08705 1854694 .. 1854723 - -12.1  -4.87665   CGCTAGCCACAAAAA       CGGAGCCACATGC TACT GCATTGGGCTCCG        TTTTCATTTCTGCTT 100 110
 CHQ57_08695 1852616 .. 1852634 - -14.6  -4.99638   AGATGGATAGAAAAA             TGCCGGTC AGT GACCGGCA             TTTGAATAACGAGCG 100 50
 CHQ57_08635 NONE
 CHQ57_08630 1823674 .. 1823695 - -17.3  -5.09225   ATGTCACCTAAAAAA           CAGCCCCGC AGAT GCGGGGCTG            TTTGTTGGCACAAAG 100 59
 CHQ57_08610 1821248 .. 1821273 -  -3.1  -3.85698   CCGCTGGTTTACAAA         GGACCG-CTCGC CAA GCGTGGCGAACC         CGGTACCGATGACTT  56 212
 CHQ57_08575 1814309 .. 1814331 -  -6.2  -3.72576   GGGGTGTTCACCAAA           GGTGGCTCAA GCA TTCAGCCCCC           AGCCTGTTGCCATTA  63 310
 CHQ57_08570 NONE
 CHQ57_08565 1812497 .. 1812531 -   -12  -3.28924   TACCCTGGCCGACAA     GCAGGCTGGCAAGCGG CAA CCCCGCGCCATCCTGC     CCGGCATTCAACTCA  72 216
 CHQ57_08535 1801691 .. 1801704 -  -2.3  -3.09273   TTCGGTCAAGATAGA               CGTCC AGAC GGATG                GGGCTTTTTGTCGGT  42 311
 CHQ57_08530 1800124 .. 1800144 -  -8.3  -2.71924   GAGTTGGCCGCAAAG            GCCTGGTTA CCT TAACAAGGC            TTGCGAGGGATGAAC  60 109
 CHQ57_08525 1799435 .. 1799456 - -10.1  -3.35679   CGGGGGCAGTCACAA           GCAGTCGGC ACAG GTCGACTGC            CTGTGCGGTCATGCA  72 34
 CHQ57_08520 1798500 .. 1798517 - -14.1  -4.62475   AGTGATAAATGAAAA             CGGCGCC ATCA GGCGCCG              TCGTCGATTTGCAGA 100 64
 CHQ57_08515 1797016 .. 1797039 - -16.8  -3.86346   GTACCCGGCCATAAA          GAAACCCGCC ATTC GGCGGGTTTC           TTGTTTATTGCATTT 100 81
 CHQ57_08505 1795211 .. 1795237 - -18.8  -3.96068   CGACTGCAAGAAGAA         GGGGCCGGTATC AAC AATACCGGCCCC         TTTGGTTTTATTCGC 100 44
 CHQ57_08485 NONE
 CHQ57_08480 NONE
        glgC 1789165 .. 1789189 - -15.8  -3.89336   GTAAGCAAATGTAAA          CAAGGGAGCC GGTCG GGCTCCCTTG          TTCAGTGGCTGCTGT 100 53
 CHQ57_08470 1788533 .. 1788557 - -20.1  -4.21974   CCATCATGCAATAAA          CAAGACCCGCC ATC GGCGGGTCTTG          TTGTTTCTACGGGTG 100 59
 CHQ57_08450 1785108 .. 1785141 -    -6  -3.51365   TTATACCTGAGACAA    GCCTGCGCC-AT-CCG TCCC CGGTATTGGCACTGGC     CCGTCAAAGGTCTTG  58 197
 CHQ57_08445 1784388 .. 1784415 - -11.3  -5.10461   GTCAGGTAACAAAAA        GCCCCGCCT GGTTGAATAG AGGCGGGGC         TGGCTTGTGATGGCA 100 121
 CHQ57_08440 1783314 .. 1783329 -  -4.6  -2.87132   CGGGCTTGCCAGATA              CCTTGC TTAT GCATGG               GACCTCCGTTGTTGT  47 16
 CHQ57_08435 NONE
 CHQ57_08430 NONE
 CHQ57_08425 1780890 .. 1780901 -  -5.8  -2.94595   AAGTGTTACCACATA                GCGA TAAT TCGC                 CAATAAAACCGGGTG  52 80
 CHQ57_08420 1780051 .. 1780080 - -16.5  -3.24747   CCGCTATACCAGCAA       TAAGTCGGGGCCC TGTT GGGCCCCGATTTA        CGCCATGGCGCGGTC 100 39
 CHQ57_08405 1776814 .. 1776827 -  -3.7  -3.93664   ATCGAATACATGAAA               GCCAG CATC CGGGC                CAAGGTGGAGCACCC  58 226
 CHQ57_08395 1775792 .. 1775806 -  -2.1   -3.1506   AAAGCTGTCGATGAA               CTCAA TCATG CTGAG               CTCCTTTGATGTTTG  43 12
 CHQ57_08390 1775101 .. 1775123 - -14.9  -3.84451   TCCTTCAAATTCAAA           CAGCCCCTC GGCGT GAGGGGCTG           CATGGGGTTGTGGTG 100 340
 CHQ57_08355 1770268 .. 1770290 - -10.6  -3.95036   AAGTAGCGTAAACAA           GACACCGG TTTGAGG CCGGTGTC           AGGTGATAACTAAAT  86 58
 CHQ57_08345 1768596 .. 1768609 -  -2.3  -3.38007   CATATAAACGAAAAC               CCCTA CTCG TTGGG                TGTCCAACTTTCGGG  45 14
 CHQ57_08340 1767109 .. 1767135 -  -8.6  -3.02043   AATCGTGCTGGAAGA         CAGCGCCGGC AAGACCA GCTGGCGCCG         CGCCTAAGGGCGTTT  62 119
 CHQ57_08330 NONE
 CHQ57_08325 NONE
 CHQ57_08320 NONE
 CHQ57_08315 1763223 .. 1763237 -  -4.2   -2.8805   ATCATCCCCCATATA               CCCATG CCG CATGGT               GACGAGCTTCACACA  45 75
 CHQ57_08310 1762932 .. 1762945 -  -9.5  -4.67755   AGACCCATGCAAAAA               GCCCC TCGC GGGGC                TTTTTCAGCGGATTA  91 56
 CHQ57_08305 1761312 .. 1761327 -  -4.6  -2.78384   TTGGGCGCCATGATA              GGGCCA TTGC TGGCGC               CTTTTGTCATGATGC  43 343
 CHQ57_08295 1759835 .. 1759862 - -15.6   -4.3898   AGCAGCCCGATAAAA        TCAAGGCCACCC CAGC GGGTGGCCTTGT         TGTTTATGGCGAATG 100 85
 CHQ57_08260 NONE
        ssrS 1750524 .. 1750545 - -14.5  -5.38326   TCAAGCAAAGAAAAA           GCCCGTCAT CGTG ATGACGGGC            TTTTTGCTGTTGGTA 100 36
 CHQ57_08240 1746289 .. 1746319 - -25.6  -3.28712   GTGCTCCTTGCATAA       CGAAGAAGCCCGCC ATT GGCGGGCTTCTTCG       TTATTGCGCCCAGCC 100 26
 CHQ57_08200 1737448 .. 1737463 - -11.8  -5.77988   ATAGACATAAAAAAA              CCCGGC CTGG GCCGGG               TTCAATGTGTGTGCG 100 55
 CHQ57_08190 1734131 .. 1734152 -    -8  -3.14344   CAGGCCCTCGATGAA           GGC-TCGGG GAGAT CCCGATGCC           AGCTATGTCAGTATC  61 80
 CHQ57_08185 1733285 .. 1733303 -  -4.6  -2.77344   GCACGGCCGAATAAG             TTGTTGTG GAT CATAACAA             AAGTTGGTGATGGCG  46 73
        mtnN NONE
 CHQ57_08175 1731595 .. 1731616 -  -2.9  -2.81768   GCAGAGCAGGCAAAG           CAGGGCGAA ATAG TTAGCCATG            GAGTTGCTCCAGCAC  41 17
 CHQ57_08170 1730692 .. 1730711 -  -2.8  -3.72576   TGTTTTTCCATTAAA            CATGACGG TGTC CCATGATG             AAGATTGGTATCTAT  53 114
        pseB NONE
        pseC NONE
 CHQ57_08155 NONE
 CHQ57_08150 NONE
 CHQ57_08145 NONE
        pseG NONE
        pseH NONE
        pseI 1722583 .. 1722605 -  -2.7  -3.08813   TTTCATTCCAATATA          TTCAGC-CCT CAAC AGGAGCAGAA           TTAATTGTTAGTTTA  43 323
 CHQ57_08120 1721899 .. 1721917 -   -11   -5.2291   ACATGACAATAAAAA             TGCCGACA TTG CGTCGGCA             TTTTAGAATTATTCT 100 34
 CHQ57_08080 1713634 .. 1713662 - -15.2  -2.78712   GGTTCAACGTAACGA        GGCCGGGAGTGC GACAT GCCCCCCCGGCC        CGAACATCAATGGCG  95 32
 CHQ57_08075 1713101 .. 1713118 -  -9.1   -5.4505   GTTTCGAATAAAAAA             TCCGGCC AATG AGCCGGA              TTTTTTATTTCACTG 100 80
 CHQ57_08065 1710405 .. 1710423 -  -5.3  -4.07568   GTTTCGGTTGGAAAA            TCCCTCCT GAAG AGG-GGGA             TCCTCCTGATTTGGC  65 90
 CHQ57_08045 1698169 .. 1698184 -  -3.2  -3.08465   ACTGACAGACATAGA              CGACTC CAAC GATTCG               AGCAGGCCGTGATTT  43 72
        pflA 1697339 .. 1697375 - -19.6  -3.02511   TGCAGTGTCTCAATA    TCAGCAGGGCTGGC GTATTCCTT GCCAGCCCTGCTGA    GGCATCAGTATTTGA 100 30
 CHQ57_08035 1696131 .. 1696141 -  -3.2  -4.09243   CACACCCGCCGAAAA                 CGAG AAA CTCA                 GCATCTTCACGGCAG  59 524
 CHQ57_08005 1690849 .. 1690868 - -10.7  -5.24129   GGTTGGCACAAAAAA            GCCCGAC ACTCGG GTCGGGC             GTGATGGGGTTGGCA 100 44
 CHQ57_08000 1690103 .. 1690119 - -13.7  -3.57144   GCCTTTATCTGCAAA              CCGGACC CTG GGTCCGG              TTTTTTATGGCCGCA 100 30
 CHQ57_07985 1688615 .. 1688642 - -12.6  -3.58801   AGACAAGCGGTGAAA        CGGGGTGCGCCA GCAA TGGTGCGCCCCG         TTTTCTTCCCGGGCG  88 172
 CHQ57_07975 NONE
 CHQ57_07970 1685603 .. 1685625 - -17.8   -3.9712   CTATTGCATGACAAA           GAAGGGAGCC GTG GGCTCCCTTC           TTCGTTTCATGATTG 100 81
        ppk2 1683591 .. 1683609 -  -4.4  -2.85297   TGACGCCAAAGAGCA             GGCGTTCC CTC GTACCGCC             AAGTACATTCGTACC  47 150
 CHQ57_07930 1676845 .. 1676864 -  -2.8  -2.91328   AACGTCAAAAAAAGG            CGGCGACTC AGT GAGT-GTCG            TGGCGAGTGTCGACC  42 13
 CHQ57_07925 1674915 .. 1674933 - -11.7  -5.10461   CGCACGCAATAAAAA             GCCCGCT ACGGG AGCGGGC             TTGGTGAGTGTGGTT 100 50
 CHQ57_07920 NONE
 CHQ57_07915 1670396 .. 1670406 -  -5.4  -3.41907   CAAAAATGAGAAAAG                 GATG CGC CATC                 AGCGGGTAACGCCAG  54 24
 CHQ57_07910 NONE
 CHQ57_07905 NONE
 CHQ57_07900 1665930 .. 1665952 -  -8.5  -3.28924   GAGGTGGCCGGACAA          GGAT-CCGCT TTTC AGCGGGATCC           TGTGGCCACCCCCGC  65 45
 CHQ57_07895 1665197 .. 1665218 - -10.9  -4.58685   AAATTTGGTTAAAAA           TAAAGCGCC ATTT GGCGCTCTA            TTTTGTGTCATTCAT 100 75
 CHQ57_07890 NONE
 CHQ57_07885 1663685 .. 1663701 - -10.8  -5.33785   AAGCACCATAAAAAA              GGGGCC TTTTC GGCCCC              TTTTCTGTCTGTGCT 100 52
 CHQ57_07845 NONE
        glpK 1652827 .. 1652850 - -16.8  -3.96449   TAAGAGCTCAAAGAA          GAGGCCGACA TCGC TGTCGGCCTC           TTTGTATTTTCATCT 100 63
 CHQ57_07830 1650979 .. 1650991 -  -4.8  -3.16338   ATGGAGACGAAGAGA                GGGA GAGGA TCCC                GGCTGCGTCGATAGC  49 234
 CHQ57_07825 NONE
 CHQ57_07820 NONE
 CHQ57_07815 1649203 .. 1649223 -  -7.5  -3.76232   GGGGGAAATAGAGAA            GGGGACG GCTGGCA CGCCCCC            TTGCCATCAGGCATT  69 32
 CHQ57_07810 1648692 .. 1648702 -  -8.2  -4.07568   TGGCTCGGTGCAAAA                 GCCG TGG CGGC                 GGTGCAAGTTGGCAG  77 68
 CHQ57_07805 1647697 .. 1647717 - -16.9  -5.45652   AGGGGTAACAAAAAA            CGGGAGGCA TTT TGCCTCCCG            TTTTGGTGCTTTCTG 100 134
 CHQ57_07800 1646192 .. 1646212 - -16.9   -4.2349   TTTGGATATGGAAAA            GGCCGACAC CCA GTGTCGGCC            TTTTGTCTGCACAAG 100 44
 CHQ57_07765 1639673 .. 1639703 - -10.3  -2.80575   AAAAGCGTCATTATA       CAGAGCCGCACCC GGATA GGGACCGGCCCTG       TATCACAGGGGATGA  67 46
 CHQ57_07760 NONE
 CHQ57_07755 1638469 .. 1638482 -  -8.1  -3.91897   GGCTGGAGGTACAAA               GTGGC CTCA GCCAC                GGGATTTGGCAGCGC  69 519
 CHQ57_07745 1637134 .. 1637158 -  -9.2   -4.4009   GCCGAGGCCACAAAA          CGCCGCGCTG GCGAT CAGCAGGGCG          CCGCTCCGGGCATCA  86 335
 CHQ57_07735 1633961 .. 1633979 -   -16  -4.59773   TGTTATCCCCAAAAA             CACCGGCC TCA GGCCGGTG             TTTTTGTATCTGCAT 100 48
 CHQ57_07725 1630789 .. 1630812 - -18.2  -4.37067   TAAAGACCATGAAAA          GACGGCAGCC CATC GGCTGCCGTC           TGGTGTTGCACGTCG 100 77
 CHQ57_07720 1628917 .. 1628927 -  -2.4  -4.25104   GGCCCGTCACCAAAA                 GCGG CGC CTGC                 GGGCCCATCGAGTCA  60 140
 CHQ57_07690 1619221 .. 1619231 -  -2.4  -3.73775   TTGATCTGCATCAAA                 CCTG TCG CGGG                 CGGGTTATTTTACGG  51 390
        pepT 1614489 .. 1614515 -  -2.2  -3.53444   GTAGCTGCTGGCAAA         GTGCTGGAAG GCCTTCT CGTGCAGCAC         AACCAGCGCAGGCCT  47 304
 CHQ57_07640 1608631 .. 1608668 -  -9.9  -2.52015   CGCAGACCGATCAAC   TGCTGGTG-GCCGAGC TGCCGTT GCCCGCCGCACCAGCA   TCCCCACAGTCCGAC  60 70
 CHQ57_07630 1606392 .. 1606420 - -24.7  -4.37092   ACCGCTGTTATAAAA        CAAGGCCCCGCCA AAT TGGCGGGGCCTTG        TTGTTTCTGGCGATC 100 57
 CHQ57_07615 NONE
 CHQ57_07610 1600846 .. 1600859 -  -3.1  -3.58726   CTGCGTCAGAGAGAA               TGTCG CTCA CAACA                GCAAGCTCCCGAACG  51 18
        moeB 1600003 .. 1600038 - -17.8  -3.54741   CATCATGCGTTGAAA    TACAGAACCCCCGATGC AGT ACATCGGGGGTTCTG-A    GTGGAGAAATGCTAG 100 87
 CHQ57_07515 NONE
 CHQ57_07510 1582732 .. 1582747 - -10.4  -5.20216   CAGAGGATGAAAAAA              GCCACC GAAT GGTGGC               TTTTTGTGGGGAAGG 100 47
 CHQ57_07505 1581867 .. 1581889 - -12.1  -5.81412   CGCAGGTAAAAAAAA           TGGTCAACC TGGGT GGTTGACCA           ATTCTTCAGCAAATA 100 226
 CHQ57_07490 1577476 .. 1577498 -  -7.7  -2.71364   CCACCTTGCCAATTA           TCACTGAGC TTGTT GCGCAGTGA           CCCCCGTGTTCATCG  57 61
        fadE 1572706 .. 1572724 - -11.7    -5.252   CAGGTCCATAAAAAA             CGCCTCC ACATG GGAGGCG             TCAGGTTCGTTTTCT 100 46
 CHQ57_07465 1570948 .. 1570983 - -17.8  -3.54741   CATCATGCGTTGAAA    TACAGAACCCCCGATGC AGT ACATCGGGGGTTCTG-A    GTGGAGAAATGCTAG 100 104
 CHQ57_07440 1565535 .. 1565545 -  -8.2  -3.25204   TCATGGGCAAACAGA                 GCCG GAT CGGC                 TGGTGGCGGGAGAGT  57 172
        gloB 1564117 .. 1564130 -  -9.5   -3.4072   CAGCTGGCATCATAA               GGGGC AATG GCCCC                CTGATCAAGGTTCGT  69 41
 CHQ57_07425 1562485 .. 1562505 -   -14    -5.626   GACTTGATAAAAAAA            CACCCCGC ACTTG GCGGGGTG            TTTTCGTATGGAGTG 100 49
 CHQ57_07415 1560875 .. 1560887 -  -7.7  -4.61199   ATGGTAGATACAAAA                CGTCA CCC TGACG                GGGAACTGTTGCTGA  81 400
        raiA 1553180 .. 1553196 - -13.7  -4.68593   GTCAGCATGCAAAAA              GGCGGGA AGA TCCCGCC              TTTGAATTCAAATTG 100 59
 CHQ57_07375 NONE
 CHQ57_07370 1552159 .. 1552178 -   -15  -4.66609   TAGGGCAGGGAAAAA            CGGGAGGC CTTG GCCTCCCG             TTTTCATGGGTGCAG 100 117
 CHQ57_07355 NONE
 CHQ57_07350 1545167 .. 1545188 - -15.9  -4.78107   GAGTAGCAGGAAAAA           GAGCTGGCG TATA CGCCAGCTC            TTTTTCTCTCAATTC 100 34
 CHQ57_07325 NONE
 CHQ57_07320 NONE
 CHQ57_07315 NONE
 CHQ57_07310 NONE
 CHQ57_07305 NONE
 CHQ57_07300 1534332 .. 1534342 -  -2.4  -3.90744   GTGGCGGTCAAACAA                 GGTC GGT GTCC                 TCTTTGGTAAAACAG  54 7
 CHQ57_07295 1533579 .. 1533592 -  -2.3  -3.36803   CAAGGCGACGCATAA               GGTTC TCAT GAGCC                TGAAAAAGAGTGTCG  45 159
 CHQ57_07290 1532441 .. 1532469 - -18.3  -3.37533   CTGGAAAACGAGTAA        TAAAAACGGGCCC GCT GGGCCCGTTCTTA        ATTGGCAAGTTGCCT 100 44
 CHQ57_07280 1530903 .. 1530923 - -13.3  -3.37895   TCGAATAGATAGCAA            GAGGAGCCA CAA CGGCTCCTC            TTTTTTATGGTTCTT  89 72
 CHQ57_07265 1527572 .. 1527582 -    -4  -2.66316   GGGCGCACTATATCA                 CAAA GGA TTTG                 AAACTGTTAACCGCC  43 32
 CHQ57_07260 NONE
 CHQ57_07255 NONE
 CHQ57_07250 1526379 .. 1526407 - -23.3  -4.62336   ATCGGATCGCAAAAA        CAACAAGGGCCCC GCC GGGGCCCTTGTTG        TCAGAGGTAGCTGGC 100 49
 CHQ57_07240 1525169 .. 1525185 -  -9.4  -5.09895   TACGGATGCAAAAAA              GCCAGC GTTAT GCTGGC              TTTTTTATTGACCGG  95 50
 CHQ57_07220 NONE
 CHQ57_07215 NONE
 CHQ57_07210 1515337 .. 1515355 -   -16  -4.93365   GCGCACAATGAAAAA             CGGCAGCC AGT GGCTGCCG             TTTTTTGTCTCGCAA 100 51
 CHQ57_07190 1509055 .. 1509070 -  -3.2  -2.74038   AGAGTAGATATATCA              CCTGTT TACG AACGGG               GTGACTGGCCTTGAG  41 200
 CHQ57_07185 NONE
 CHQ57_07180 1507129 .. 1507147 -    -3   -2.9356   ATCCACACTGACACA             CCCGCCGA GAC TGAGCAGG             GAGAGCAGGGTCATT  42 122
 CHQ57_07175 NONE
 CHQ57_07170 NONE
 CHQ57_07165 1503851 .. 1503868 - -14.1  -5.28176   GCCAGCCATAAAAAA             GCGCGCC TCGG GGCGCGC              TTTTGCTATCAGGGT 100 49
 CHQ57_07155 1502042 .. 1502070 - -16.1  -2.60075   TGTGTCTGAACCAAT        GAAAACGCCGGCA AGC TGCCGGCGTTTTT        GTGAGTCAGAACGTG 100 43
 CHQ57_07145 1498772 .. 1498800 - -21.9  -3.76232   TCGGCAAACAGACAA        TGAGAAAGGCCCG TTA CGGGCCTTTCTCA        TTTCTCATGGTGAGC 100 46
 CHQ57_07135 NONE
 CHQ57_07130 NONE
 CHQ57_07125 NONE
 CHQ57_07120 1494581 .. 1494601 - -15.4  -2.52464   TCCGCTGGTAACTGA            GGGCCCCG TGATG CGGGGCCC            TCAGCCTGATTACTC  93 35
 CHQ57_07105 NONE
 CHQ57_07100 NONE
 CHQ57_07095 1490306 .. 1490340 - -10.2  -2.78384   TGCCTTGGGAGGAGA    GTGTGCCAGACCA-GC TCTGG GCATGGTCTGGCA-AC    CGATCAGGCCAGGGT  67 29
 CHQ57_07090 NONE
 CHQ57_07085 1488224 .. 1488238 -  -8.5   -4.7254   AGGGGGCAGCAAAAA               GGGGC GCAAG GCCCC               TCTTTGTAACGGGTA  88 47
 CHQ57_07080 1487701 .. 1487718 - -14.1  -5.06414   TGCTGGCAATAAAAA             GCCCGGC TTGA GCCGGGC              TGGAGGGATAAGTTG 100 66
 CHQ57_07065 1480084 .. 1480107 - -13.9  -5.42259   GCATTGGCAAAAAAA          TGACCGGGG TCAATT CCCCGGTCA           TCTGAGTGAGAGTGA 100 64
 CHQ57_07060 1478173 .. 1478192 -   -15  -5.45652   ACCCTGAATAAAAAA            CGGCTGCC TTCG GGCAGCCG             TTTTGCTTTTCAGCG 100 45
 CHQ57_07030 1471822 .. 1471844 - -13.4  -3.64822   ATGCGGGTAGTCAAA           CGGGCGGC TGCGATG GCCGCCCG           TCACTTGCCTTAAAA  93 35
 CHQ57_07025 1470409 .. 1470428 -    -2  -3.37732   AGACTAAGCCGACAA            TCTTACCC GCGC GGGTTTGA             TAAACAAGCAAAAAT  45 462
 CHQ57_07015 1468871 .. 1468888 - -12.7  -5.06414   TGCGGGCAACAAAAA             GCCGACC CTGA GGTCGGC              TTTGTCGGCAAGTAG 100 47
 CHQ57_07010 1467144 .. 1467167 - -15.3  -2.87598   AGGGGGAGAAAAGAG          CAGGCCCCC GAAGTT GGGGGCCTG           TGTGGCAATGGCGCG  95 57
 CHQ57_07005 NONE
 CHQ57_07000 1465670 .. 1465685 - -11.8  -4.61747   CGAAGAAGTACAAAA              CGCGCC AGCG GGCGCG               TTATGGTGATGAATG 100 47
 CHQ57_06995 1464454 .. 1464474 - -11.8  -2.80098   ACGAGGGGAAAAGAG            CCCGGCGC ACGGG GCGCCGGA            GGGGATCATAGCTCG  73 31
 CHQ57_06990 NONE
        dapE NONE
 CHQ57_06980 NONE
 CHQ57_06975 1461893 .. 1461923 -   -19  -4.56597   TGCCCTCGTGAAAAA       CAGCAGGGGCGCCA TAG TGGCGCCCCTGGCG       GGCTGAGAGGGCGAT 100 40
 CHQ57_06970 1459912 .. 1459940 -  -4.4  -2.71712   TCCCTGCTCGCAAAG        GCGGGTCAGACG ATGTG CGTCAGACCGGG        TCTTCTTCCTGAAAG  46 16
 CHQ57_06965 NONE
 CHQ57_06960 1457452 .. 1457475 -   -11  -3.35679   TTGGTCTATCCACAA          TACCCCCGGT CCTG ACTGGGGGTA           TTGTTTTATACCGCA  76 95
 CHQ57_06945 1453739 .. 1453768 - -22.3  -3.18264   GTGTCCATTCATTAA       CACAAAGGCCCCG CTTG CGGGGCCTTTGTG        TCGATCGCGCAAGCG 100 45
 CHQ57_06940 NONE
 CHQ57_06935 1452633 .. 1452656 - -18.2   -5.0916   CGGGCAATATAAAAA          GAGGCCAGCC TTGC GGCTGGCCTC           TGTTGATCGTCACCG 100 156
 CHQ57_06920 1450061 .. 1450084 -    -3  -3.14602   CTGATGCCATCAAGA          TCGTGCTGGGC GCC GCCC-GCAAGC          TGATCTGATAGCCAC  45 183
 CHQ57_06910 1447750 .. 1447767 -  -9.8  -5.04987   AATAGTGTGAAAAAA             GGGGCC AGATCA GGCCCC              TTTTCCTATCCGTTG 100 51
 CHQ57_06840 1433419 .. 1433441 -  -9.1   -3.2699   ACCATAGGGACAATA           GAGCCACTG CAGAC CTGTGGCTC           TGTCGTTGACCACGT  67 184
 CHQ57_06830 1432387 .. 1432411 - -14.4    -4.614   GCGAACGAGATAAAA          CAAAACCGGC GCTGG GCCGGTTTTG          TGAATGCGATCAGAG 100 35
 CHQ57_06825 1431627 .. 1431640 -  -9.5  -4.46212   GCTGTGATCACAAAA               GGCGC CTGG GCGCC                TGGGCGCCTTTTTGA  90 109
 CHQ57_06810 1429923 .. 1429944 - -15.9  -3.25942   AGGCGTTGATAGCAA           TCGACCGGC CTTG GCCGGTCGA            TTGCTGGTTTATTGG 100 69
        ssrA 1429437 .. 1429475 - -16.9  -3.78879   GACAGCATAAGACAA   CAAAAAACCCGCAAAGC CTTAT GCTATGCGGGTTTCTTG   GACTTCGTTGGTCAC 100 56
 CHQ57_06800 1428049 .. 1428066 - -11.3  -4.14243   GATTTGATGTCAAAA             GGACTGG CTAA CCAGTCC              TTTTTCTATTGCGTT  91 62
 CHQ57_06770 1421225 .. 1421247 -  -9.9  -4.41895   AATCTCCAATGAAAA           TGGGACTGC ATAGA ACAGTCCCA           AGGTAGGTTCACAGA  90 467
 CHQ57_06765 1420180 .. 1420214 -  -3.3  -3.87815   TGTCAGCGGCATAAA    CGTCCCC-GCCCGGCC TGAT GGCTGGGTAGGGGTCT     ATGACGGGTAAATGA  55 62
 CHQ57_06760 NONE
 CHQ57_06755 1418043 .. 1418065 - -14.9  -4.38116   GGCATAAAAACGAAA           CAGGGCACC TTGTG GGTGCCCTG           GAGTCGGTGTGAAAA 100 178
 CHQ57_06745 NONE
 CHQ57_06740 NONE
 CHQ57_06735 NONE
 CHQ57_06730 1416195 .. 1416221 - -11.5  -5.18866   TCCAAATAAACAAAA         CCCCGGCACGC ATGAA GCATGTCGGGG         TTAAAGGTAGAGCGG 100 65
 CHQ57_06725 NONE
 CHQ57_06720 NONE
 CHQ57_06715 1414977 .. 1415003 - -16.7  -3.51976   AATCCTTGAAATGAA         CAAGGCCACCT TGGTG AGGTGGCCTTG         GGGGTTGTGTCGGGA 100 144
 CHQ57_06710 NONE
 CHQ57_06705 1414236 .. 1414249 -  -2.4  -2.79188   CATTGAACTCAATCA               TGGA TGTTTC TCCA                TTTCTGCAGGTGCAC  39 9
 CHQ57_06700 1413819 .. 1413841 - -14.9  -3.92659   TCCTTAAAATGCAAA           CAGCCCCTC GGTGT GAGGGGCTG           CATGAGGTCTTGTTT 100 58
 CHQ57_06695 NONE
 CHQ57_06690 1412829 .. 1412839 -  -2.4  -3.65046   CGGTGACTCCAATAA                 TGCC AAG GGCC                 AGCCTGGAAGGGTTG  49 81
 CHQ57_06685 NONE
 CHQ57_06680 1411858 .. 1411870 -  -9.1  -3.38272   GAGCAGCAGGCAGAA                CTGCG GGG CGCAG                ATGGGCATGTTTTGC  69 307
 CHQ57_06670 NONE
 CHQ57_06665 1406731 .. 1406749 -    -6  -3.19642   ATTATGATGTAGTAA             TTAGCTCT CAA AGTGCTAA             ATAACTGATCCCAAT  54 45
 CHQ57_06660 1404125 .. 1404173 -    -9  -2.71177   ATAGAGAAAACAGAC TACCCGCTC-CCGGAAGAGTTGTT GTC AACATC-CTCCCGGTGAACGGTTA CAAGCTGGTAACGTC  63 23
 CHQ57_06650 NONE
 CHQ57_06645 1399034 .. 1399046 -  -5.5  -3.90744   TGGCTTGGGAAAGAA                CACGC TTA GCATG                CATGTCCTGTCCAAA  63 245
 CHQ57_06640 1398398 .. 1398413 -  -3.2  -3.28791   AGTCGCGGTGTAGAA              GGGATC GAAC GATGCC               TTGATCTCTTCAACC  47 261
 CHQ57_06630 1396861 .. 1396889 - -23.3  -3.91911   TTCAGTTTAACCAAA        GCAAGAGAGGGCC AAT GGCCCTCTCTTGC        TATCTATTGTGTTGG 100 41
 CHQ57_06620 NONE
 CHQ57_06615 1394124 .. 1394155 -   -19  -3.67588   TAAATTGTATTGAAA      TAAAACAGGCTCAC CTCG GTGAGCCTGTTTTA       TTTCTGGCGTTGTGC 100 87
 CHQ57_06595 NONE
 CHQ57_06590 1389555 .. 1389572 - -11.3  -5.05782   ATCCATGCGAAAAAA             TGGCGCA TTCA TGCGCCA              TTTTTTTTTGCCTGA 100 145
        purU 1387054 .. 1387083 - -19.5  -3.85817   AGTCGGTGGCAGAAA       CAACAAAGGCTCC CTCG GGAGCCTTTGTTG        TTTCTGGCGTGGTGC 100 51
 CHQ57_06560 1383069 .. 1383084 -  -6.8   -3.0814   ACTGACATTTGAAGA              CTGGCC GAGC GGCCAA               GGATGGAACGGGTGT  56 502
 CHQ57_06550 NONE
 CHQ57_06545 1379848 .. 1379873 -  -7.4  -4.05208   AGGCAGAGTAAACAA         GCGGGGCCGC GCAGTG GCGGCCCCTG          GCAGAGTGATACTCC  74 41
 CHQ57_06540 1378919 .. 1378933 -  -4.2   -4.7254   ATCCGTGACGAAAAA               GTGTGG TAT CGACAC               GCCCCCGGGCGTGTT  70 64
 CHQ57_06520 NONE
 CHQ57_06515 NONE
 CHQ57_06510 1374321 .. 1374334 -  -2.3  -4.17089   TCTAAACCTCCAAAA               GTCTC TCCC GAGCC                GACTTTTGTTGGTGC  58 61
 CHQ57_06470 NONE
 CHQ57_06465 1360325 .. 1360341 - -13.7  -4.67942   CGCAAGAAAGCAAAA              GAGCGCC GTG GGCGCTC              TTTTTTATGGGCTCG 100 59
 CHQ57_06450 1357309 .. 1357319 -  -3.2  -3.99153   TCATCATAAAAAAAT                 CCTC GTT GAGA                 TGGCACGTTGGTTAC  55 315
 CHQ57_06445 1356228 .. 1356247 - -13.6  -4.13648   AAGTGGATAGACAAA            GGGGATGC CGTT GCATCCCC             TTTTCGCATTATCTG 100 53
 CHQ57_06440 1354804 .. 1354821 - -12.7  -5.80727   AAAAACAATAAAAAA             GGAGGCC GTCC GGCCTCC              TTCATATGCCTTGAG 100 47
 CHQ57_06435 1353538 .. 1353555 - -11.3  -4.32482   AGCGACAATGCAAAA             GGGATGC CTCG GCATCCC              TTTTTTGTGCACGGC  95 57
 CHQ57_06420 NONE
 CHQ57_06415 1348947 .. 1348968 - -15.9  -3.24232   CCGCCCGCAAAGACA           GATGCCGCC TGAG GGCGGCATC            TTGCTGGCAGCCTGG 100 46
 CHQ57_06405 1346105 .. 1346121 - -15.1  -3.75897   AAGCGGCAAGGTAAA              GCCCCGC AGT GCGGGGC              CTGGATCATCTACCT 100 79
 CHQ57_06400 NONE
        ppnK 1333382 .. 1333410 -    -6  -2.72263   AGAGCGGGTTGAAAG       CGGCTTAGAACAG CTTG CTGCCCCA-GCCG        AGCTTGTTGCGCAGC  51 1
 CHQ57_06350 1331546 .. 1331579 - -25.5  -3.90092   ATAGCCATATAAGAA     GGGGAACCTCACACC CGCA GGTGTGAGGTTCCCC      TTTTACTGGCCGTGT 100 54
 CHQ57_06345 1330184 .. 1330216 - -10.6  -2.59797   GGGGGAGAAAGAGAG     GGCAGGGAACCCGGC GTGT ACCGC-TTCCCTGCC      ACTTGGCATCACACC  69 34
 CHQ57_06340 1329285 .. 1329309 - -12.8  -2.62396   GATTGGGGGAGATGA          GGCGCCCACC ACTCG AGCGGGCGCC          TGTCAGGTTAGCTGA  76 33
 CHQ57_06335 NONE
 CHQ57_06330 NONE
 CHQ57_06325 1324550 .. 1324580 - -18.4  -4.66953   TCAAGAGGGGAAAAA       GCACCGCCTCTCAT GGC ATGAGAGGCGGTGT       TGAGCGGCGCTGGCT 100 40
 CHQ57_06320 1323580 .. 1323611 -   -16  -3.32498   GAGTGCAGATAGCAA      TCAAGCCCATGACC GGCA GGCCATGAGCTTGA       TATTCCAAGGAAAAA 100 50
 CHQ57_06315 1322238 .. 1322256 - -11.7    -3.885   ACTTGCAGATAATAA             GGCTCCC GCTGG GGGAGCC             TTCTCTTGTTCAGCT  90 35
 CHQ57_06295 1319699 .. 1319716 - -12.7  -5.48063   ATTGAATATAAAAAA             CACCGCC AGCT GGCGGTG              TTTTGATATGTCGGC 100 41
 CHQ57_06280 1318479 .. 1318503 - -15.8  -4.08279   AGATGCCAGAAATAA          CAAGGCCACC GTTAT GGTGGCCTTG          TTGTTGACTGCAGTG 100 85
        gabD 1314671 .. 1314685 -  -6.4  -3.85698   GGGGTCTGGTATAAA               TCCGCT CCT AGCGAA               TGCCCCCAAAGCAGA  63 18
        gabT NONE
 CHQ57_06255 1311408 .. 1311433 - -14.9   -5.0925   TTTCAAAATGAAAAA         TAACCGATGTG GGAT CACATCGGTTA          TGAAAGCGGCGGGAT 100 185
 CHQ57_06245 1309744 .. 1309767 - -16.8  -3.79113   AGGGCCGGATAACAA          GAAGGGGAGC CATG GCTCCCCTTC           TGCTTTTTTGCTGTG 100 53
 CHQ57_06240 1308352 .. 1308381 -  -9.2  -2.79501   GAGAGCGGCATCATA       TCCCAGCCAGCC AGAGAG GGCGAGCCGGGA        CGCCGCAGGATCTGA  63 94
 CHQ57_06235 1307518 .. 1307544 - -22.4  -4.16837   GACAAGCAGAAACAA         CAAGGCCAGCGC AGT GCGCTGGCCTTG         GCATAGGAAGCTGTC 100 310
 CHQ57_06230 1306189 .. 1306214 -  -3.1   -3.4252   GGGGATCGAGTACAA         CGATGCCCAGC CGAT GATCGGCAGCG          TGCTCACCAATCCGC  49 360
 CHQ57_06215 1303182 .. 1303194 -  -4.1  -4.28762   ACAAGTGTACTAAAA                GTTCC AGT AGAAC                CTGTTTCTTTAACTA  62 318
 CHQ57_06210 1301823 .. 1301852 - -13.7  -4.10179   GATAACCGATAGAAA       TAAAAATCCCCCG GTAA CGGGGGATTTTTT        TGCCTCTTACTAGGA 100 161
 CHQ57_06200 1300438 .. 1300455 - -12.7  -5.64421   ACGGGAAACAAAAAA             TCCCCCG AGCG CGGGGGA              TTTTTATTGCGCGAA 100 143
 CHQ57_06165 1291437 .. 1291454 - -12.7   -4.7254   AGCTGTCATCAAAAA             GGGACGC CGCG GCGTCCC              TTTTTCAATACTGCG 100 125
 CHQ57_06155 NONE
 CHQ57_06140 1288249 .. 1288263 - -12.8  -4.55689   ATCAGGCAGAGAAAA               GGCGCC ATG GGCGCC               TCGTAAACTCACTCT 100 58
 CHQ57_06125 NONE
 CHQ57_06120 1284076 .. 1284104 -   -16   -2.8547   AGGGCGGACATTATA        GGGGCCAGTCGC TGCCT GCGACCAGCCCC        AATTTTAGCTGTGAA 100 128
 CHQ57_06115 NONE
 CHQ57_06110 1283219 .. 1283254 - -26.4  -3.06831   TGAATGGTGATTGAA    GTGAAAGAGGGCGTCC GTCG GGACGCCCTCTTTCAC     TATCCGGCTGTGCCT 100 42
        tsaA 1281140 .. 1281174 - -15.8  -4.29472   CAAAGTAAAACTAAA     CGGCCTGAGCCCGGTA CAG TACCGAACTCAGACCA     TGTCATCCGCCAGCT 100 109
        cysK 1275377 .. 1275396 -   -15  -4.56367   TAGCTCATAAAGAAA            CGGCGCTC CTGG GAGCGCCG             TTGTTTTGAAATTAT 100 49
 CHQ57_06070 1274714 .. 1274729 -    -9  -4.24342   TGGGGGAGGAATAAA              GCTGGA TTAC TCCAGC               TCGTCCATCAGGGCA  82 16
 CHQ57_06065 NONE
 CHQ57_06060 1272339 .. 1272357 - -10.3  -5.60993   TTTTTCATAAAAAAA             CCGAAGC ACATG GCTTCGG             TTTTTTGTTGCAGTG 100 63
 CHQ57_06045 1269633 .. 1269651 - -11.7  -4.14739   TCAGCCATGGCAAAA             GGCCCCT GTCAA AGGGGCC             TTTTTGTTGGCGTGT  91 54
 CHQ57_06025 1262969 .. 1262983 -  -8.5  -5.76633   GCAGACACAAAAAAA               CCGCC ACTCG GGCGG               TTTGTGCAATGCAAG 100 51
         ggt 1261007 .. 1261038 - -18.8  -3.34043   GCCAGCACGTCACAA      GCACCAAGGCGACC CTGA GGTCGCCTTGGTGA       AGATACGCTGGCACT 100 40
 CHQ57_06015 1258985 .. 1259007 - -15.6  -2.91593   GACTGGGGGATAAAC           GAAAGGGGCC ATG GGCCCCTCTC           TTGTCTGGTGGTGAC  95 45
 CHQ57_06010 1257382 .. 1257398 - -13.7   -4.2704   GTGATGAGCAAGAAA              GGGAGGC CGA GCCTCCC              TTTTCTTGTCTTATT 100 65
 CHQ57_06000 1255381 .. 1255398 - -14.1  -6.02914   GGCAGATAAAAAAAA             CGGCGCC CGCA GGCGCCG              TTTTATCGGTTCAGG 100 46
 CHQ57_05995 1251908 .. 1251924 - -11.5  -4.41895   AACTGGCAATGAAAA              GGCCCCA TGA CGGGGCC              TTTGGCGTTTTATAC  95 49
 CHQ57_05990 1250525 .. 1250560 -  -5.4  -3.14344   GAGTGCGGGCATCAA    GCATGAGGCG-ACCAGT TAC AGCGGTGCCCCCCATGC    GTTCAGTGTGTTTGG  50 211
 CHQ57_05960 1242256 .. 1242268 -  -3.3  -3.14344   GATGGCGGTGAGCAA                CCTGT TGC ACGGG                ATCGGTGCCATCGGG  45 239
 CHQ57_05905 1230451 .. 1230462 -  -4.4  -2.87344   GACGTGGTCGAGATA                CAGA GCGA TCTG                 CTTGGCACTCATAAA  47 53
 CHQ57_05900 1229459 .. 1229491 - -16.3  -4.65078   AGATGGGCAATAAAA      CAGACGGGCCTGCCA GGG TGGCAGGCCCGTGTT      TGTCAGTGCTGTCGG 100 68
 CHQ57_05885 NONE
 CHQ57_05880 1223919 .. 1223929 -  -2.4  -3.35046   TCAGTTTTTCAAATA                 GCTG TGG CCGC                 GACAGAGATGGGGTC  45 81
 CHQ57_05875 NONE
 CHQ57_05870 NONE
 CHQ57_05865 1220780 .. 1220799 -  -9.2  -2.71364   TCATGGGCGCAAGCA            CCCCGCCA CGCC CGGCGGAG             TGCTTGCGATGTATC  63 39
 CHQ57_05860 1219661 .. 1219679 - -17.4  -3.64703   CCCTGTTCAGTCAAA             GGCCCCGC TTC GCGGGGCC             TTCTGTTTTCAGCGG 100 34
 CHQ57_05835 1215087 .. 1215101 -   -10  -2.84801   CAGCGGTAAATATGA               CACACC ACA GGTGTG               TGTTTCTGTTTCTCA  68 38
 CHQ57_05820 1211115 .. 1211142 -  -7.6  -6.22802   CTGCACAAAAAAAAA        CCGCCCCGGC AAGTGTGA GCCAGGGCGC         AGTTAGTGAGGGATC 100 39
 CHQ57_05815 1209032 .. 1209049 - -14.1  -2.57344   CATGGCGGGGAGAAT             GGCCCCC CGCA GGGGGCC              GGGGTGGTTAGCTGT  84 33
 CHQ57_05810 NONE
 CHQ57_05805 NONE
 CHQ57_05800 NONE
 CHQ57_05795 1204957 .. 1204977 -  -9.6  -2.91264   GCGGTGAGGCACATA            GCGGGGCC GTGGT GGTCCCGC            ATCGAGGCATTGCAG  65 74
 CHQ57_05790 1203124 .. 1203134 -  -5.4  -2.53382   ACCAGGCGGAATGTA                 TGGA GGA TCCA                 CTGCTCTCCCCCAGT  47 63
 CHQ57_05785 1202066 .. 1202084 -    -3  -4.25681   AGTTAAGGGAACAAA             CAGGGCGA TCA TCTCCTTG             TGGTACTGGTCAACC  60 135
 CHQ57_05780 1200134 .. 1200151 - -12.7  -5.44119   TGGATGGTAAAAAAA             GGCGACC CAAA GGTCGCC              AGACAGAAAGATAAC 100 42
 CHQ57_05775 1198351 .. 1198381 - -24.2  -3.87075   ATGACTCTCCAGAAA       CGACAGAAGCGCCA TTG TGGCGCTTCTGTCG       TGGGGGTGGCAACCT 100 44
 CHQ57_05770 1197591 .. 1197607 - -13.7  -3.48738   CACTATGATGAAAGA              GGCCCCT TGC AGGGGCC              TTTTTGTTGGGAGAT  95 392
        astB 1193177 .. 1193201 - -21.5  -3.91488   AATGGGTTGAAACAA          GAGAGCCGGGC ATT GCCCGGCTCTC          TGTTTATCATTCTGT 100 65
 CHQ57_05750 1191090 .. 1191114 -  -2.7  -3.16683   ATCGGATCTGATGAA          GGCCTTCGACA GGG TGCCGACGACA          CCCTATTGAATTTAA  45 77
 CHQ57_05745 1189982 .. 1190026 -  -3.4   -2.9155   TTTGCCAACAGCATA CGCACCGGTTCCATC-ATGGC GGGG GCCATAGCGGGAACCGTGGCC GAGATCTGGAGCTTT  42 171
 CHQ57_05735 1187493 .. 1187513 - -16.9  -4.39002   AAATGGCTGATAAAA            GGGATGGGC CTG GCCCATCCC            GTATGACGTCTCATG 100 155
 CHQ57_05730 1186055 .. 1186078 - -18.2  -5.43487   AAACGATACAAAAAA          GAGGCCACCC GAAT GGGTGGCCTC           TTTACCTTGGGTACC 100 48
 CHQ57_05720 1183492 .. 1183510 -   -16  -5.24129   GGCGGCCATAAAAAA             CCGGCCTC ATG GAGGCCGG             TTTTGACATTGTGCT 100 59
 CHQ57_05715 NONE
 CHQ57_05710 1181779 .. 1181796 -    -7  -2.51464   TCACGACTGAGCAAC             CCCAAG GGATGG CTTGGG              TGCTTGTACTGGGCC  52 181
 CHQ57_05705 1179371 .. 1179393 - -19.2   -3.1355   GTGACTGACATTGAA           GAGGGGAGCC ATT GGCTCCCCTC           TCTGCTGATGCGTGG 100 47
 CHQ57_05690 NONE
 CHQ57_05685 1176201 .. 1176212 -  -5.8  -3.05463   ATGGTTGCCACTGAA                GGTG TTGC CACC                 GAGCAATTTAACTAT  53 109
 CHQ57_05680 1174884 .. 1174902 - -12.4  -3.03159   GCAACGCGGTGAACA             GAGCCTGG AGC CCAGGCCC             GAATTGCGGCTGGCG  72 150
 CHQ57_05670 1171598 .. 1171618 -  -3.9  -3.71848   CCCCGTCATGAACAA            CTGGCCG TCACTAT CGGCGAG            TCCGCGGTCCTGCCC  54 428
 CHQ57_05660 NONE
 CHQ57_05655 1167832 .. 1167860 - -16.7  -3.72576   GGCTGCGCCAGTAAA        GTCAAAGCCCCGC ATT GCGGGGCCTTGGC        TGTATGAGAGTGGTG 100 43
 CHQ57_05650 NONE
 CHQ57_05645 1165073 .. 1165112 - -17.2  -2.85896   GCCATCAAGTAACCA  GCCCGACAAAGAGCCCCGC AGT GCGGGGCTTTTTG-CTGGC  CATCAGGTGCGGCTG 100 44
 CHQ57_05630 NONE
 CHQ57_05625 1158929 .. 1158949 -  -2.5  -4.57569   CGACTTTCTCAAAAA           CCGGGCGC TGACCT GCGCC-GA            TATGCTGGCCCCCAA  66 489
         map 1131680 .. 1131709 -  -6.3  -4.96501   GCTGATAAAAACAAA       CCCCGGTACCA TCTCGCTT CGGCGCCGGGG        TTTTTGATGTTAACC  83 35
 CHQ57_05510 NONE
        dapD 1127939 .. 1127956 - -14.1  -4.67038   GCGCCAAAATCAAAA             GGGCGCC ATCA GGCGCCC              TTGCTCTCAATGGTG 100 48
 CHQ57_05500 1127422 .. 1127452 - -21.3  -3.77219   AGTATTCAAGCCAAA       CAACAAGGGCGCC TGATG GGCGCCCTTGTTG       TTGCTGGTGCTGGCT 100 40
 CHQ57_05465 NONE
 CHQ57_05460 NONE
 CHQ57_05455 1118379 .. 1118399 - -13.3  -3.92625   CAGAGCTTAACCAAA            CCGCTCTCC TCT GGAAAGCGG            GTGGTAAAAGAAGGG 100 42
 CHQ57_05450 NONE
 CHQ57_05445 1117150 .. 1117179 - -22.3  -2.62184   GTCCCTGTGAGACGA       GAAGGGCCTTGCC ATCC GGCAAGGCCCTTC        TGCTATCTGGACACA 100 68
 CHQ57_05435 1115448 .. 1115497 - -10.1  -3.16881   GATTCATTGGATTAA GGACAGCACAGGGGTGTGGGCATG TTATC CAAGCCC-C-CCCCTGCAC-GTCC AGAGTTTACTGACAG  70 84
 CHQ57_05430 NONE
 CHQ57_05425 1111349 .. 1111370 - -10.1  -4.36914   TCCCTGGGGAGAAAA           CGGGATGCC ATGT GGCATCCCT            TGAATTTGATAGTAG  90 113
 CHQ57_05420 1109882 .. 1109901 - -10.6  -2.99649   AGATGCTCATACAGA            TGGGGCGC TGGT GCGCCCCT             TGTGCCATGTTGTCG  72 65
 CHQ57_05415 1108827 .. 1108837 -  -2.4  -2.62184   TTCTTTTTGACATGA                 GAGG TAT CCAC                 TTCTAGGGAACAGAG  38 177
 CHQ57_05410 1107775 .. 1107790 - -10.4  -4.83243   GCGAGATAAAACAAA              GGGAGC CTGA GCTCCC               CTTTTGAATCAATGA 100 52
 CHQ57_05405 1107198 .. 1107223 - -17.7  -5.31275   CGTGAGCAGAAAAAA         GACCGATGGCA GCGA TGCCATCGGTC          TTTTGCTATCTGCGC 100 54
 CHQ57_05370 1099771 .. 1099786 -  -6.8  -2.52623   CGGGCCCGAGAAGAG              CCTGGC GTAT GCCAAG               GAGCGCGGACTGGCG  48 454
 CHQ57_05325 1092287 .. 1092299 -  -9.1  -3.15378   GCAACAACAGATAGA                GGCCA AGC TGGCC                GCTGCCTTGTCCCCC  61 348
 CHQ57_05315 NONE
 CHQ57_05310 NONE
 CHQ57_05305 1089713 .. 1089728 -  -4.6  -4.11404   GCCAGAGTATAGAAA              GGGGCA CCGG TGACCC               GGGCAAAGACGCGGC  62 61
 CHQ57_05300 1089237 .. 1089250 -  -2.3  -3.36073   GACAGTGTTCAAATA               CCTGA CTCC TCTGG                GAAAATTGCGCCATT  45 94
 CHQ57_05295 NONE
 CHQ57_05290 1086809 .. 1086826 - -12.7  -5.29782   CAGAGCCATAAAAAA             CCGGAGC AGCT GCTCCGG              TTTTTTTGTGTCCAC 100 54
 CHQ57_05280 NONE
 CHQ57_05275 1084411 .. 1084448 - -25.7  -3.01712   TGCGCCCGGCCAATA   GCAGAGCGCCCCTTGCC GGCT GGCAAGGGGCGCTCTGT    CATGACAGAGGGCAT 100 59
 CHQ57_05260 1080461 .. 1080480 -  -3.5  -4.18018   GCTTGCGAGTGAAAA            TGCCAGC CGGCTT GCTGCCA             TGCAACGGGCGGAGA  62 447
 CHQ57_05210 1064766 .. 1064790 -   -10  -3.05022   TCCGCCATATATATA          GCCCAACTGA TTTAT TCGGTTGGGC          TTTTTTGTATCTGCG  69 199
 CHQ57_05195 1063642 .. 1063682 -  -7.6  -3.92324   GGTGTGAATATCAAA GCGTGTTTGTATGAGGCGC TGGG GCACCCCATGC-AACACGT  AATTGGGACATAGCC  72 65
 CHQ57_05080 1042821 .. 1042839 - -13.2  -5.93252   GGTAAAAACAAAAAA             GGCGAACA TGA TGTTCGCC             TTTTTTGTTTGTAGT 100 46
 CHQ57_05065 1040349 .. 1040359 -  -3.2  -3.54475   GCGGGCATTATACAA                 GAAG CCG CTCC                 CTTTTAAACCCTTGA  49 44
 CHQ57_05060 1040205 .. 1040247 -   -15  -4.63527   GTACGAGGCCAAAAA CGACCAAGGGGTTAGCATCA TGA TGATGCTAACCCCTTGTTTT ATATGGCGCTCCCGA 100 29
 CHQ57_05055 1038998 .. 1039039 -  -4.1  -3.89346   TGTTGACGGCATAAA TGGCGACGCCCGGATTGGC TTGT GCCAGTCCGGGTGAGGTCG  TTATGCGGTTTGAAT  58 53
 CHQ57_05050 NONE
 CHQ57_05045 1036874 .. 1036889 -  -4.6  -3.24747   GCGCGAGACCAGTAA              CCGCCC GACC GAGCAG               GGCATTGTGCTGAGC  48 154
 CHQ57_05035 1036068 .. 1036089 -    -3  -3.57144   CCTGTGACTCCTAAA           GGCTCA AGGATTTAGA TGAGCC            ATTAACGTGGTTATT  51 36
 CHQ57_05030 1035561 .. 1035580 - -13.6  -4.61873   TGGCAGAAATGAAAA            GAGGAGGC AAAT GCCTCCTC             TTGGATGGGAATGGA 100 47
 CHQ57_05025 NONE
 CHQ57_05020 NONE
 CHQ57_05015 NONE
 CHQ57_05010 1033939 .. 1033965 - -11.5  -5.18866   TCCAAATAAACAAAA         CCCCGGCACGC ATGAA GCATGTCGGGG         TTAAAGGTAGAGCGG 100 98
 CHQ57_05005 NONE
 CHQ57_05000 NONE
 CHQ57_04995 1032774 .. 1032795 - -11.6  -4.35524   CCTTGAAATGCAAAA           GGCCACCT GTAGTG AGGTGGCC            TTGTTGGGGGGATCG  95 95
 CHQ57_04990 NONE
 CHQ57_04985 NONE
 CHQ57_04980 1031613 .. 1031635 - -14.9  -3.84451   TCCTTCAAATGCAAA           CAGCCCCTC GGCGT GAGGGGCTG           TGAGAGGTCTTGTGT 100 58
 CHQ57_04975 NONE
 CHQ57_04970 NONE
 CHQ57_04965 1030310 .. 1030335 - -11.8  -3.13343   ACTCCAATGATGCAA         GGGGCCAGCC TGTGAG GGCTGGCCCT          TTATGTTGTTTGTTG  77 66
 CHQ57_04960 1029890 .. 1029916 -  -3.6  -3.55563   ACGGTATGGGGCAAA         CCCCACTGTG CAAAAAT CCGAGTGGGG         TGGTCTGGCGCTACG  51 81
 CHQ57_04955 1029477 .. 1029501 - -15.8  -5.52384   GCGTCACCAAAAAAA          GGGAAGGCCA TGAAT TGGCCTTCCC          CAAGACCCACCCACT 100 89
 CHQ57_04935 1025109 .. 1025122 -  -3.1  -3.98214   ATCATCGATTACAAA               GACCT GTTC AAGTC                GCTGGAGAAGACGGT  55 199
 CHQ57_04895 1015624 .. 1015639 -  -6.8  -3.57462   CAGCTCAGGGCGAAA              CAGCCG CTCA CAGCTG               GCGTAGAAGTTGTTT  63 44
 CHQ57_04885 1014403 .. 1014415 -  -9.1  -3.44527   CACCGAGGAGCAGAA                CTCGG TGA CCGAG                GATCTGAACCGCAAC  66 282
 CHQ57_04870 1010131 .. 1010160 -  -2.9  -3.27476   ATGGGTAATCAGGAA       GGGATAACCGA TGGTAAAG TAAGTTATCCC        TGTCGAGATACTGAA  47 46
 CHQ57_04865 NONE
 CHQ57_04860 1007345 .. 1007373 -    -6  -3.71848   CGTCGCCAGCAAGAA       GCTGGCGCAGATCC CGG GGATCGGC-CC-GC       TCACCGCGAGTGCCT  63 282
 CHQ57_04830 1002554 .. 1002567 -  -2.3  -4.38712   GTCATGCCGAGAAAA               CCCGA CTTG TCTGG                ATTAATTGGGGAAGA  63 183
 CHQ57_04820 NONE
 CHQ57_04815  999438 ..  999461 -  -3.1   -3.5594   AAGGTACCTGTCAAA          CGC-GCCG TAGTGGAGG CGGCCGCG          ACCCGAATACTCATC  49 235
 CHQ57_04805 NONE
 CHQ57_04800 NONE
 CHQ57_04795 NONE
 CHQ57_04790 NONE
 CHQ57_04785 NONE
 CHQ57_04780  992450 ..  992476 -  -9.4  -5.19251   TAAGATGAATAAAAA         GAGGGCCAGTTT AGC AGACCGACCCTC         CCTCCTGACCATCCC 100 61
 CHQ57_04775  991421 ..  991469 - -13.4  -3.32963   ATTTTCACGTCAGAA TTCCTGCTTGAGC-CA-GGGGACT GGA AGTCGCCGTGAGCTTAAGCAGGAA AGATGGCGTTTTTAT  89 65
 CHQ57_04770  989409 ..  989442 -  -8.7  -5.60993   TGTGGCACAAAAAAA     GATATGCCCCCACGT CGGG ACGCGGGGGCAGGGC      GTTTTGGAGGGGAGT 100 53
 CHQ57_04765  987470 ..  987497 - -15.6  -4.57073   GAGTGCGGCCAAAAA        GAAAACCGGGCC AAGG GGCCCGGTTTGC         TGAGGTTGCACCGCC 100 44
 CHQ57_04760  986526 ..  986559 - -11.7  -2.54634   GGTTACATCATCAAC     CGCAGGGCGAGCAGGC GGT GCC-ACTCACCCTGTG     TGAATCAAGGATCAA  73 37
 CHQ57_04750  985046 ..  985057 -    -3  -2.78384   TTGGGCCTGACGAGA                TGAT CTCG ATCA                 AGTCCCCTTGCGGTT  41 143
 CHQ57_04745  984721 ..  984756 -  -9.6  -4.42386   GGGCGAGTCAGAAAA    TGGCGGCCAGCATCGG CCGG CTGACGCTGGCTGACA     GGCACTATTGGCCGA  86 101
 CHQ57_04740 NONE
 CHQ57_04735  982416 ..  982436 -   -14  -4.83615   GATTGCCCATAAAAA            CGGGGCAG TCTCG CTGCCCCG            TTGCCCTCTTCATTC 100 57
 CHQ57_04725 NONE
 CHQ57_04720  979695 ..  979710 -    -6  -3.82031   TGAATGAGGATCAAA              CCCGGC AACT GCTGGG               GGCAGCCGGGTTTGG  60 74
 CHQ57_04685  973100 ..  973120 - -15.5  -3.20403   TGAAGGGAGAAGAGA            GGAGCCTGA TGA TCAGGCTCC            CGATGAGGATCATGC 100 35
 CHQ57_04680 NONE
 CHQ57_04675 NONE
 CHQ57_04670 NONE
 CHQ57_04665 NONE
 CHQ57_04660  966754 ..  966768 -  -5.6  -4.07568   TTTCTCCGGTTAAAA               GCGGAC AAA GTCGGC               TTCGTCAACCAGGGG  65 5
 CHQ57_04655  966157 ..  966169 -  -4.8  -3.01712   TTGCTGTTTTTAATA                CCCT GCTTA AGGG                GTTTGCGCTCTGTGC  48 19
 CHQ57_04650 NONE
 CHQ57_04645 NONE
 CHQ57_04640 NONE
 CHQ57_04635  961453 ..  961476 - -12.4  -2.60496   GCCCGCCTGAAACAG          CTGTGCCCGG CAGG CCGGGCACAT           TTCGCCAGTGGCTGA  76 50
 CHQ57_04625 NONE
 CHQ57_04620 NONE
 CHQ57_04615  959503 ..  959519 - -10.8  -5.18355   TTTAAAAAGCAAAAA              CCCGGC ACCAG GCCGGG              TCTTCTAAATGATGG 100 38
 CHQ57_04610  958728 ..  958745 -  -6.9  -3.53224   GATGTGCTGGGCAAA             CCCGTGC TGCT GGACGGG              CTTCGCCAGATATTG  58 398
 CHQ57_04600  954774 ..  954784 -  -2.6  -5.12068   GACAGTGAAGAAAAA                 TTTT GAA AAAA                 ATGAACCGCTCTCCA  78 171
 CHQ57_04575  948941 ..  948969 -  -8.1  -2.89881   GATGCACCTGATATA       CG-GGGTGCGAG ATTGTA CTCGCCCCCACG        CCATCATGCAATTTG  58 88
 CHQ57_04570  947431 ..  947452 -  -6.6  -2.92642   ATGAGCAGGGACATA           TCAGGCCGC CGAGT GCGG-CTGA           CGGGTGTCCTGGCGA  54 4
 CHQ57_04565  947142 ..  947155 -  -9.5  -5.22943   ACCAAACGTAAAAAA               GCCCC GTCA GGGGC                TTTTTTTTCGACAAC 100 51
 CHQ57_04540  942954 ..  942985 - -18.8  -4.67353   GCAGGGAGTCAAAAA      TAACAGAGGCGGCC CTTG GGCCGCCTCTGTTG       TCTTCGCAGGATAAA 100 47
 CHQ57_04535  941149 ..  941164 -  -7.6  -4.29106   CTGCACATTAATAAA              GCAAAC AAAC GTTTGC               CAGATTGTTTAACGC  76 104
 CHQ57_04530  939139 ..  939156 - -14.1  -4.86001   AGTATGCCATAAAAA             CGGCGCC CTCA GGCGCCG              TTGCAATAGCGTGTG 100 48
 CHQ57_04525  938743 ..  938765 -  -3.3   -3.6608   AGGATCCCAGGTAAA           GGTTTGCGC GCTCA GTGCAACCC           GAACCAGGCAGCGGC  51 14
 CHQ57_04520  938256 ..  938279 -  -9.5  -3.29144   CCATTGTTTGTACAA          GGGACGCCC GTCACA GAGCGCCCC           TTGAGTCATGTCAAC  69 57
 CHQ57_04515  936929 ..  936957 -  -2.9  -4.11216   GCGCGAGCTGCAAAA        CGTGGTGCGCAAC ATA GTGGTGCTCAACG        ACAGAGAGCTGGTGA  57 399
 CHQ57_04500 NONE
 CHQ57_04495  933509 ..  933525 - -10.8  -5.60993   GGCCCGATAAAAAAA              CCCGCG TTTAT CGCGGG              TTTTTTTATGGTGCA 100 52
 CHQ57_04480 NONE
 CHQ57_04475 NONE
 CHQ57_04470  929550 ..  929562 -  -9.1  -2.73875   GTGGCGTGAAGATGA                GTCGG TTG CCGAC                ATGCTGGCACGGGCT  57 82
 CHQ57_04460  927679 ..  927696 - -12.7  -4.81212   CGCATCATAAGAAAA             GGGCTGC CGAA GCAGCCC              TCGCAGAGGGAGGAT 100 483
 CHQ57_04450 NONE
 CHQ57_04445  926039 ..  926058 -   -15  -3.40522   ATGGTGTGATCACAA            CGGCCTGC TCTC GCAGGCCG             TTTTGTTTCAAGGGG 100 53
 CHQ57_04430  924262 ..  924277 - -10.4  -4.49981   GAGACGATCAGAAAA              GGCTGC CGTG GCAGCC               TTTTTTATCCAACGG  93 69
 CHQ57_04425  923361 ..  923374 -  -9.5   -5.4505   TCGTTCAATAAAAAA               GGCCC GTCA GGGCC                TTTTTTCATGGGAAT 100 49
 CHQ57_04400 NONE
 CHQ57_04395 NONE
 CHQ57_04390  910058 ..  910075 - -12.7  -3.35695   GCCAGACAAAGTGAA             GGGGAGC ATGT GCTCCCC              TTTTTGCATGTCGCT  83 45
 CHQ57_04375 NONE
 CHQ57_04370  904742 ..  904762 -  -7.6  -3.25942   AGGCTGGCAGATTAA           CACGCCAGC TCGG GCTGG-GTG            GCTTCGAGCAATTCA  61 1
 CHQ57_04365  904247 ..  904266 -   -15   -5.4505   CTTTGCAATAAAAAA            CGGGCAGC CCAG GCTGCCCG             TTTTTTATTGCGTGT 100 53
 CHQ57_04350  901629 ..  901659 -  -8.3  -2.80622   AGATAGGTGAGCAGA      CCGATCACGGCGCC GGAA AGTGCCGTGAT-GG       CGACCCCGGCCAGCA  60 515
 CHQ57_04340  900274 ..  900291 - -12.7  -4.93365   TCTCACAATCAAAAA             GAGCGCC TGAT GGCGCTC              TTTTGCTACCCAGGA 100 53
 CHQ57_04330  898107 ..  898119 -  -3.4  -4.39166   GCCCAGAGATCAAAA                TGGT ATGGA ACCA                ATGGCAAATACAGGC  62 184
 CHQ57_04325  896748 ..  896763 -  -2.6  -4.45117   CATAGTGTAAATAAA              TTGAGCC ATT GGCT-AA              TTCTCTTCCTATTCA  63 412
 CHQ57_04320  895054 ..  895071 - -12.7  -4.26305   AAAAGGCAATAGAAA             GGGGAGC CGAA GCTCCCC              TTGTGACGCCGTCAC  95 43
 CHQ57_04315  894619 ..  894636 -  -7.7   -5.5112   TTGAGCAATAAAAAA             GGTCCTC GATA GAGAACC              TTTTATGACTGACAG 100 49
 CHQ57_04310  893006 ..  893024 - -14.6  -5.28176   GCCAGCCATAAAAAA             TGCCCGTC GAT GACGGGCA             TTTTTGTTTGCGAAA 100 48
 CHQ57_04290 NONE
 CHQ57_04285  886498 ..  886517 -   -10  -2.63631   GTAATGGCGAGACGA            CGACAGCT CATC AGCTGCCG             GCGCCTTCGATCTGG  66 16
        pdxA NONE
 CHQ57_04275 NONE
 CHQ57_04270 NONE
 CHQ57_04265  883418 ..  883444 -   -21  -4.63218   TTGGTGCGAATAAAA         CAAAGCCCGGCA ACT TGCCGGGCTTTG         TTCTTGTATAACGCG 100 82
 CHQ57_04245  880569 ..  880595 - -13.6  -3.91412   AGGATATGGCATAAA         CGTGACGGCCCC ATC GGGGCCGTCTTG         AGGGGATCAAGCCAG 100 32
 CHQ57_04240  877469 ..  877498 -  -5.7  -3.51934   GTGGTGTGATAAAGA       GTGA-GGGGGAG TCTTTTG CTCCCCCTTCGC       TGTAGGGCACAGTTA  56 97
 CHQ57_04235  877048 ..  877061 -  -9.5   -4.4648   ACCGCGATGAGAAAA               GGGCC TGCG GGCCC                TTTGTTCGTTGTTGC  90 51
 CHQ57_04205  870135 ..  870149 - -11.4  -5.60689   GCAGACAATAAAAAA               GAGGCC CGA GGCCTC               TTTTTTCATCCAGCA 100 57
        queG  857856 ..  857866 -  -5.4  -3.04461   TATCCACTCCCAACA                 TCTG CAT CAGA                 TTGTTCCTTTTATAG  50 114
 CHQ57_04145  857055 ..  857078 - -13.8    -3.922   AAAGGTGCAACGAAA          GAGGCTCGGC ATTT GCCGGGCCTC           TTTTCTATCATCGAC 100 60
        metN NONE
 CHQ57_04130 NONE
        metQ  853464 ..  853482 -   -16   -5.4505   CGCGGCAATAAAAAA             GGCCACGC TTG GCGTGGCC             TTTTTTGCTGAGTGA 100 45
 CHQ57_04120  852764 ..  852789 - -20.5  -4.55697   ATCTGGATAAATAAA         TGAGGCGGGCC AGAT GGCCCGCCTCA          GCATTGGTACAGGCG 100 145
 CHQ57_04085  839580 ..  839609 - -12.1  -2.92475   GCCACGCGCACAAAT       GCCAAGGCCACCC CATG GGGTGGCCTTGTT        GTTGCTGGGATGGAC  78 45
 CHQ57_04060  835891 ..  835911 - -16.1  -3.17186   AAGCAGACCAACAGA            CGGGCCCCA GTG CGGGGCCCG            TTTTTATTGCTGGTC 100 64
 CHQ57_04040 NONE
 CHQ57_04035  831226 ..  831245 -   -15  -3.26717   AGCGAGACAAGCGAA            GGGCCTGC AGTT GCAGGCCC             TTTTTGCATGGTGTG  95 59
 CHQ57_04030  830302 ..  830317 - -11.8   -4.1347   TTCCAATCAGACAAA              GGCGCC CAGA GGCGCC               TTTTCCATCCATGTC  91 43
 CHQ57_04020  828295 ..  828312 - -14.1  -4.30576   TTGGGATCAGGAAAA             GGCCGCC CTGG GGCGGCC              TTGCTCTACAGCGAA 100 42
 CHQ57_04015  826007 ..  826035 - -21.1  -4.82863   GAAGTAGAAAAGAAA        CAGCCCAGCAAGC GTA GCCTGCTGGGCTG        TGGGTCAGGCTGACC 100 95
 CHQ57_04010 NONE
 CHQ57_03970 NONE
        leuB NONE
        leuC NONE
        leuD  813881 ..  813900 - -13.6  -4.77165   GGCGGGATAATAAAA            CAGGGAGC CAAG GCTCCCTG             TTGATTCTACTCGTT 100 85
 CHQ57_03950  812488 ..  812503 -  -4.6  -3.57246   AGTACCAAGGAAAGA              CGCGCC TTCC AGCGCA               TGATAATCAACGCCC  54 407
 CHQ57_03940 NONE
        thiP NONE
        thiQ  808852 ..  808873 - -15.9   -4.8048   TCTTCATATGAAAAA           GGGGAAGCC AAGC GGCTTCCCC            TTTTTTGATCCCGTC 100 61
        hemL  793525 ..  793541 - -10.8  -4.65446   ATCAGATAGAGAAAA              GGGCCC GCAAA GGGCCC              TCTCGTTAATTTCTG 100 47
 CHQ57_03860  792231 ..  792247 -    -5  -3.34962   GCTGACAGGTTACAA              GCTGGG AATTG CCCTGC              TCGGCAATTTCATCT  51 317
 CHQ57_03845  789948 ..  789975 - -21.4  -4.10161   CAGTACTGGCGAAAA        GCAGAAGGGGCC ATCA GGCCCCTTCTGC         TTTGGTCTCTGTAGC 100 60
 CHQ57_03830 NONE
 CHQ57_03825  786409 ..  786433 - -22.9   -5.1861   GCTACCAGTAAAAAA          GCCGCCCGGTC TGT GACCGGGCGGC          TTTTTCCATTATGTG 100 51
 CHQ57_03805 NONE
 CHQ57_03800  779349 ..  779363 -  -7.1  -2.52464   CTGTCTCCTAATTCA               GCACG CTACC CGTGC               CATCCATAAATTGAG  52 112
        dksA  778836 ..  778853 -  -9.1   -5.4756   AAGCTCAATAAAAAA             GGGAGCC TGCA AGCTCCC              TTTTTTCAGTTATGC 100 53
 CHQ57_03790  777796 ..  777814 -  -2.4  -3.73224   TCAGGCCTGACCAAA             TGAAAAAC GAT GTACTTCA             TTCAACAATTTCAGG  51 67
        pcnB NONE
        folK  775737 ..  775756 -  -5.8  -3.29144   TGATCTTGCTCATAA            CGTTTCAGG GCT CCT-AAACG            TCTGCACCGGGGGCA  56 19
        panB  774901 ..  774918 - -14.1  -3.61764   CCATGAATGGCGAAA             CGGGGGC TTTC GCCCCCG              TTGCAGTCCATGAGG 100 47
 CHQ57_03770 NONE
 CHQ57_03765  773548 ..  773563 - -11.8  -4.81083   TGCAACCATGAAAAA              GGCGCC TGTT GGCGCC               TTTTTACTGCATGAG 100 43
 CHQ57_03745  770332 ..  770371 - -17.2  -4.15197   CAAATAGCAGACAAA  CAAAAGCGGCGCCGACCT GAAC AGTCCGGCGCCGCTTTTT   ATTCACGAGGCGGGT 100 40
 CHQ57_03730  767432 ..  767454 - -16.4  -5.07107   GAAAGCCCTAAAAAA           TTAAGGCGCC AAT GGCGCCTTAA           TTTTTGGTATTGGCC 100 69
 CHQ57_03700  758770 ..  758795 - -20.5  -4.81551   CACTGATAGGAAAAA         CGGCGCCTCTG TTAA CAGAGGCGCCG          TTTTTTTGTGTGTCC 100 143
         gap  750316 ..  750344 - -16.1  -3.35046   CCAGGGGCCGAAATA        CAAAAAGGCGGCC AAT GGCCGCCTTTTTC        AAGCTACTTGAATGC 100 51
 CHQ57_03670  749336 ..  749358 - -19.2  -3.67052   ACAGTCTGAATAGAA           GAGGGCACCC GTT GGGTGCCCTC           TTTCGTTATGGGTTT 100 55
 CHQ57_03660  745941 ..  745958 - -12.7  -4.82667   CCACCAGATTAAAAA             GCCCGCA ACGA TGCGGGC              TTTTTTTATGGTCGT 100 47
 CHQ57_03515  729277 ..  729295 - -17.4  -3.87815   GCGCAGCGGGAGAAA             GCGGGGGC GGG GCCCCCGC             CCGTGTCAGACCCGA 100 31
 CHQ57_03510  727387 ..  727416 - -15.1   -4.4648   AGGGCCAGCAGAAAA       CAAAAAGCGCGCC GATT GGCGCGCTTTTTT        ATACCAGCAGTGGCG 100 49
 CHQ57_03500  725489 ..  725507 - -13.8    -3.695   CCCAAACATTGGAAA             CCCGCGCC CGG GGCGCGGA             TCCCATCCTTGGTTG 100 58
 CHQ57_03495  724287 ..  724300 -  -2.3  -3.60792   GCTCTAACTGTGAAA               CTGGC AACC GCCAT                ATCCAATAATCCTGC  49 149
 CHQ57_03470 NONE
 CHQ57_03460 NONE
 CHQ57_03445  713121 ..  713160 -  -4.3   -3.3579   AAAGTTTGGTAAAGA TGAGAT-GG--CCGGGCTGC ATT GCGGCCCGGAGCCGATCACA ATGTTCCCTGCTCCT  51 21
        rimI  712569 ..  712595 -  -7.2  -3.01712   GCTGGCGTTGCAAGA         TCCTGCGGTAAA CAA TGCACCGCTGGA         ATGACAGCCCGTATC  56 39
 CHQ57_03430  710004 ..  710042 - -17.6   -2.8805   ATCACTTGTCAGACA   GACAGCAAAAAGCCGCTC GAT GAGCGGCTTTTTGATTTC   ATGGCGGGCGGGATC 100 55
 CHQ57_03400  702232 ..  702251 - -11.4  -2.62263   AGCCGGTTGACATCA            GGGCCACC TCTG AGTGGCCC             TTCTTTTGCGACGTG  73 53
 CHQ57_03390 NONE
 CHQ57_03385  700251 ..  700276 -  -7.5   -4.0825   CTGGTAACGAAATAA         GCA-CTGGGGCC AGA AGCCCCTGCTGC         ATCAGGAGAGGGACT  74 41
 CHQ57_03360  696732 ..  696775 - -28.4  -3.64599   GCAGCATACGCCAAA GCGCAGGCCGGCTCATTAAC CTGG GTTAATGAGCCGGCCTGAGC AACGGGTCGTGAGCA 100 41
 CHQ57_03355  695807 ..  695821 - -12.8  -2.78384   CCTGGCTGCATCAGA               CCGGGC GCC GCCCGG               CCTGATGTTTGACTC  77 39
 CHQ57_03320  688324 ..  688342 -   -16  -5.18355   GGCAAAAATGAAAAA             GGCCGGTC ATT GACCGGCC             TTTTGTTGTCTGGAG 100 44
 CHQ57_03295  684348 ..  684361 -  -2.3  -2.61548   GGGGACGATAACGGA               TAGCC AGAG GGCTG                AAATCGCCTTTAAAA  38 166
 CHQ57_03260  676737 ..  676761 -  -5.8  -3.66378   CATAGGTTAGGTAAA         TGGG-CCATTA ATAT TAACGGACCCA          GAGGTGGCAGTATTG  60 213
 CHQ57_03255  675975 ..  675986 -    -3  -3.06183   TTTATCCTTATTTAA                TCAT TCTT ATGA                 CTGTTCTTCGTTCAG  43 20
 CHQ57_03250  675280 ..  675306 -  -2.3  -4.30576   GCTGGATTACCAAAA         CGTTAGACCAA TATCC TTCGTCCAACA         GTGAAAGGCATAGAT  60 365
 CHQ57_03215  667050 ..  667065 -  -7.5  -5.76237   CAGATAAATAAAAAA              CCGGC ACTAAG GCCGG               TTTTTTTAGCGTTAT 100 55
 CHQ57_03170  658007 ..  658019 -  -3.4  -4.16842   TTGATTGCGAAGAAA                TAGC TACTG GCTA                TTTTTATATCACTTT  60 66
 CHQ57_03165  657579 ..  657597 -   -16  -4.20531   GACAGGTAGTGAAAA             GGCTCGCC AAT GGCGAGCC             TTTTTTGTGTCCGCT 100 81
 CHQ57_03135  652883 ..  652896 -  -3.7  -2.60508   TACTGTCCAAAAAGG               GCTCC TGTT GGGGC                TAGGTGAGTAAAAGT  43 46
 CHQ57_03130  651575 ..  651591 - -13.7  -5.38047   GAGTGAGATAAAAAA              GGCTGCC ATC GGCAGCC              TTTTTTCAATCTTCG 100 31
 CHQ57_03120  649698 ..  649725 - -14.2  -5.27335   TGCGTTAAATAAAAA        TGACCCACAGGT TTTC ACCTGTGGGTCC         GGATCCGGCCGCCGT 100 87
 CHQ57_03085  643780 ..  643797 - -12.7  -5.54907   CGCAGAAAACAAAAA             TCCCGGC CTTG GCCGGGA              TTTTGCGTTCTGGCG 100 79
 CHQ57_03050 NONE
 CHQ57_03045  635445 ..  635462 - -12.7  -5.71712   TTTCAGACAAAAAAA             GCGCCTC AGAG GAGGCGC              GGGGAAAAAGACAGA 100 251
 CHQ57_03005 NONE
 CHQ57_03000  626967 ..  626986 -   -15   -4.7497   CGCAGCCATGAAAAA            GCCGGAGC TGAG GCTCCGGC             TTTTCTGGTACTGCA 100 60
 CHQ57_02995  625921 ..  625931 -  -2.4  -4.33928   TAGTGCAAATAGAAA                 GCCC GCA GGGT                 TCAGGTTGCTGTCAT  60 108
 CHQ57_02990  624175 ..  624202 -   -17  -2.60075   GGCTTGGTAATCAAG        GGGGCGCGTACC GGTC GGCACGCACCCC         GGGTGACGGGTCAGT 100 36
 CHQ57_02985 NONE
 CHQ57_02980  621826 ..  621841 - -11.8  -3.84451   TCGGGCAAACGCAAA              GGGCCC CGGC GGGCCC               TTTTTTCTTTTCCAC  88 67
 CHQ57_02965  617997 ..  618023 - -19.5  -4.62069   TTCCGAGCGCAAAAA         TCCCGCCACGG TATGC CCGTGGCGGGA         TTTTTTTTATGGATG 100 52
 CHQ57_02955  614743 ..  614774 - -14.5  -3.34517   AGGTGGGGGGAAAGA      GAAAAGCCGTCCC TGTCGG GGGACGGCTTTGC       ATATGGCGATCTCGT 100 53
 CHQ57_02945  609855 ..  609868 -  -9.5  -3.66286   ACAGGATGTGAAGAA               GGGGC CAAG GCCCC                TTCTGTGGTGCGGGT  73 40
 CHQ57_02935  608393 ..  608411 -  -4.4  -2.76261   GCTCAAGTCTGAAAC             GGACCTGC CGT GCACGGCC             ATGGCCCCCTTTGCT  46 106
 CHQ57_02930  607078 ..  607095 - -14.1  -5.38958   AGGGACAAACAAAAA             GCCCCGC TTGA GCGGGGC              TTGCACGGTTTAGCC 100 35
 CHQ57_02925  605562 ..  605578 -  -4.4  -3.28791   AGGGGGCGGCTAGAA             TG-GGGC ATTC GCCCACA              ATCAACAGACGAACA  51 475
 CHQ57_02890  597714 ..  597756 -   -15  -3.33696   GCGGTCCGGAAGGAA TGGCAGACGCCCTGACCCGGC TGTT GCCGGG-C-GGGCGCCTG-CA TCGGGAGCTATTTCG  86 33
 CHQ57_02860  587490 ..  587513 - -12.4  -4.07687   ACCCCGCCTGCAAAA          GAGCCCTGCC AATT GGCAGGGTTC           TTTCTTTATATGGCG  95 51
 CHQ57_02850  583593 ..  583619 - -17.4   -5.1675   TCATCCATGAAAAAA         TCCTCTGCCAGC CGG GCTGACAGAGGA         TGGAGTGCGACAAGG 100 50
 CHQ57_02845  581761 ..  581781 - -18.3  -4.22652   CCAGAGTAGGTAAAA            CGGGGAGCC ACT GGCTCCCCG            TTTAGTTTATGACGA 100 47
 CHQ57_02780  569415 ..  569431 -  -3.6  -3.02144   TCACTTGCTGCAAGA              TCAGGC GCTTG GCCAGA              TGAGCGGCAGGATCA  46 9
 CHQ57_02775 NONE
 CHQ57_02770 NONE
 CHQ57_02765  567966 ..  568005 -  -7.1   -3.2963   AGGATTGCGGGAGAA  GCGGCAAACCCTTGCAGC GCCAG GCTGGCCG-GTTTGCCGC  CGAGGTCGCCGGATC  59 39
 CHQ57_02760  567319 ..  567339 - -13.3  -5.06414   TGGTCTCAATAAAAA            CGGCAACCC CCG AGGTTGCCG            TTTTTATGTGTTTAT 100 47
 CHQ57_02735  564095 ..  564115 - -16.9  -3.30731   CCAATGAGCACAAGA            CGGCAACCC CAG GGGTTGCCG            TTTTTTGTTTGCCTG 100 101
 CHQ57_02705  556910 ..  556924 -  -4.2  -2.59748   TAGGGTGACAATCTA               CCCAGA TTG TCTGCG               CAAGGTCAAATAACA  43 115
 CHQ57_02700  554123 ..  554142 -   -15  -5.72622   CGTATAAATAAAAAA            GGGCGCCA ATGA TGGCGCCC             TTTTGCGGGTTTTAT 100 51
 CHQ57_02695 NONE
 CHQ57_02690  552469 ..  552495 -  -9.4  -3.06696   TTCTGCTGCAAGAGA         CCTGCTTGCG GGCTATG CGCCAGCAGG         GAACGTTTTGCGTCA  66 66
        mutS  545092 ..  545111 - -13.6  -4.54727   TCGTGCAAAGTAAAA            GGGGAACC GTGA GGTTCCCC             TTTTGTATGCTGCTG 100 55
 CHQ57_02640  542246 ..  542260 - -11.4  -5.36441   TCTCCATAGAAAAAA               GCTCCC GTC GGGAGC               TTTTTTTATGCCCGT 100 48
 CHQ57_02630  540465 ..  540497 - -26.5  -3.07962   CGGGACAGCCGAATA      GAAAAGGCCCCGCCA CAT TGGCGGGGCCTTTTC      ATTGGTGTCATGGGC 100 44
 CHQ57_02625  538807 ..  538834 -  -6.3  -3.05384   CGGTGTCGTACTCAA        GGCGACCAGCCA CCCAC TGGCCGGT-ACC        TATGTGGTGATCAAG  49 375
 CHQ57_02615 NONE
 CHQ57_02610  535244 ..  535260 -  -5.8  -3.16492   GGACATCGATGAAGA              CCCGCT TCTCC AGCGAG              CAACTGCGCTCTCCC  50 50
 CHQ57_02595 NONE
 CHQ57_02590  531826 ..  531851 -  -8.3  -4.86731   GCCTTGCAAACAAAA         GCCCAGCCCTGA TGC TCAGGT-TGGGC         TTGTTTGAACTGGCT  93 120
 CHQ57_02580  529912 ..  529924 -  -7.7  -3.14132   CTTCTGGCTCAGGAA                GAACC CCT GGTTC                GAGCAGGACGTGCTC  57 81
        rarD  528310 ..  528320 -  -4.6  -2.71712   TCTTGCTGCCCAAAT                 CCCG CCA CGAG                 TTGCATACCAGGCTG  43 97
 CHQ57_02535 NONE
 CHQ57_02530 NONE
 CHQ57_02525 NONE
 CHQ57_02520  521112 ..  521157 -  -4.6  -2.87931   TTGATGGTCGATAGA GGCCGGATGCGGGCG-GTCAAC AGGG GTTGTCCCGCCCGCTTG-GGCA AAAGCTACCTCTATC  47 117
 CHQ57_02515  520511 ..  520528 - -14.1  -5.02074   TGACGGTTGAAAAAA             CGCCCGG CAAG CCGGGCG              TTGAGTCATCTGAGC 100 85
 CHQ57_02510 NONE
 CHQ57_02505  519473 ..  519486 -  -2.4    -2.981   CCCCAAGTTAGAAAC               GTAC TTCGTC GTAC                ATGTCTTGATCGCCG  41 4
 CHQ57_02500 NONE
 CHQ57_02495  517718 ..  517741 - -13.8  -3.49653   ATGAGGTTGATATAA          CGACGCCCGG CGGG CCGGGCGTTG           TGGTGCGACTGGATG  95 57
 CHQ57_02485  515553 ..  515564 -  -4.4  -3.62572   CATCAGCATCGCAAA                CAGT TTGC ACTG                 CATTGTGGTCAGCTG  54 377
 CHQ57_02430  503204 ..  503228 -  -7.9  -4.09685   GCTGATGTGTGAAAA          TCCGAAACC TGTCATG GGTTCCGGA          TTTATGTGATGGTCA  74 102
 CHQ57_02420  500585 ..  500604 - -13.6  -4.12603   TTGACGAAACAAGAA            GAGGCACC CAAG GGTGCCTC             TTTGCTTTGAAGAGC 100 44
 CHQ57_02400 NONE
 CHQ57_02395  496739 ..  496763 - -18.7  -3.71848   GCTGGCGAGTAACAA          CAAGGGCTCCA GTT TGGAGCCCTTG          TTCATTGTGGTGGGT 100 40
 CHQ57_02375  490219 ..  490244 - -16.3  -3.01712   GTGTCTCGCCCAATA         TAAAACCCGCC AACT GGCGGGTTTTA          TATTGTTGCGTTGGC 100 45
 CHQ57_02365  488618 ..  488632 -  -2.1  -3.40403   TCGCCTCGATGAGAA              CG-AGC CGCT GCTGCG               TGGTTTCGACGACGA  44 444
 CHQ57_02355  486676 ..  486706 -  -3.8  -3.17075   GGCTGGGGAAGTGAA       CCGGGACGGCCATG ATC CATGGCCGGGGCAA       TCAGGGTTTGGCTTG  47 26
 CHQ57_02350  485084 ..  485114 -  -4.7  -2.51133   GACGTACCGATCAAC      GGGGCACTCAGTCAG GTG CTG-CTG-GCGACCC      TGTTGTTTATTGCCG  42 396
 CHQ57_02330  480474 ..  480493 -  -6.3  -2.86343   AGGGCAATGAGGAGA            GGGCCGG TTGTCT CCGGCCA             GGGTCACTTTTGCGG  52 29
 CHQ57_02325  479489 ..  479508 -  -8.5  -3.46602   GGCCGGATAGCAGAA            GGGGCCC TGGTGG AGGCCCC             TTGTTTGGCTCAGGC  67 35
 CHQ57_02320  478249 ..  478273 -  -4.3  -3.16564   CCTTTATCGCAGCAA         CGGCATGGTG TTTGGC CAC-ACGCCG          GATCATATCCAGCGC  48 124
 CHQ57_02310  476276 ..  476302 -  -3.6  -3.14344   CAGTGCGGTCAGTAA         CATTATGTGGGG TCT CCCGGCATCATG         TGGTGCCCCATGCTA  47 43
 CHQ57_02305  475629 ..  475659 -  -9.7  -3.78775   GGTGCCAGGATGAAA      CCGGCGCC-GGACA TGTT TGTCCAGGCGCAGA       CCGCCCTCAAGTTGG  71 246
        cyaY NONE
 CHQ57_02270  469757 ..  469776 -   -15  -3.14156   AAATCGAATATAAAG            CGGCCTGC AGAA GCAGGCCG             TTGTTTTATCCGTCG  95 50
 CHQ57_02260 NONE
 CHQ57_02255 NONE
 CHQ57_02250 NONE
 CHQ57_02245  462890 ..  462913 - -18.2  -5.34555   GCAGATCAGAAAAAA          GAGAGGCCGC AATC GCGGCCTCTC           TTTTTGGGTGGTATC 100 58
 CHQ57_02230  460112 ..  460133 - -15.1  -5.60993   GGGGCCACAAAAAAA           CGCGCCGGC ATAA GCCAGCGCG            TTGTTTTTCTTGCTG 100 51
 CHQ57_02225  459086 ..  459108 -  -4.7  -2.63715   ATGGAGCGCACATGA           CGTCAGGCC CGTGT GGCTGGACG           AGTGACTGGGGGTTG  45 66
 CHQ57_02220  456828 ..  456849 - -15.9  -2.87146   GCGCTTCATAAGAAT           CTGGCCAGC AATC GCTGGCCAG            GGGTCATCTGTGATG  95 50
 CHQ57_02215 NONE
 CHQ57_02210  454896 ..  454917 -  -5.1  -3.52358   TGAATAAAAATTGAA           CCACCCG TTCAGTCG CGAGTGG            GGAGGGATCGGCATA  56 80
 CHQ57_02205  454222 ..  454239 - -12.7  -5.18726   CCCTCATAACAAAAA             GGCGACC CGCA GGTCGCC              TTTTGCCGCTTAACC 100 35
 CHQ57_02200  453234 ..  453255 -  -5.7  -3.27298   GCGTTGAATGACTAA           GCCCGCATC ATAG GAAGCCGGC            ATCTTGGCTGCAAGA  52 459
 CHQ57_02190  452833 ..  452858 -  -8.9  -2.52896   CGAGCTGGTAACCCA         GTGGCAGGCCA ATAT TGGCCTGACCC          TGAGGTTTTGATGTC  58 64
 CHQ57_02180  451316 ..  451347 - -17.4  -4.00042   TGCCGCATGAAACAA      CAAAAGGGGCGACC ACCT GGTCGCCCCTTTTT       CGTCTGCGTGACGGG 100 41
 CHQ57_02170  448921 ..  448935 -  -2.1  -2.83504   GGTCCATGAAAAGAG               CCTCA ATAAA TAAGG               GTTTGGACTCAATAT  39 132
 CHQ57_02165  448422 ..  448451 -  -9.3  -4.04209   CTAAACCATGACAAA       GAGGCTTGATTGC CGTC GCATTCAACCCTC        TTGTTTCCATGACCC  81 53
 CHQ57_02155  446566 ..  446584 -  -8.2  -2.81072   GCCATTGAACACAAT             GTGAGAAC TTC ATTCTCAC             CACCAATGCCCCCTC  60 392
 CHQ57_02085 NONE
 CHQ57_02080  432178 ..  432203 - -13.3  -3.88787   GCATAGCGGTATAAA         TACAAGGCGCC CTCG GGCGCCTTGTG          TTGTTTGCGAGTCGG 100 41
 CHQ57_02065  425771 ..  425789 -   -16   -4.9792   TATCCGAGATAAAAA             GGGCTCCC GTC GGGAGCCC             TTTTTCAGCAGGTCA 100 60
 CHQ57_02060  425123 ..  425146 -  -5.2  -4.44448   AGGAGTTGAAACAAA          GAGGCCGC CGTGAGTT GCGGCCTG           TCTGCATCGGGTGCT  72 59
 CHQ57_02045  423033 ..  423055 - -15.6  -5.25803   AACCGCTATAAAAAA           GCCGGATCCT GTC AGGACCCGGC           TTTTTAGTGAGTCTG 100 105
 CHQ57_02035 NONE
 CHQ57_02030 NONE
 CHQ57_02025 NONE
 CHQ57_02020 NONE
 CHQ57_02015  415353 ..  415365 -  -9.1  -4.62069   CCTGGACCCGAAAAA                GCTGG ATG CCAGC                CTGGGCGGTCACGAT  85 223
 CHQ57_02005  413357 ..  413376 - -11.4  -5.59534   AAGGACAATAAAAAA            GCCCCGAA GATG TCCGGGGC             TTTTTCGTTGGTCAG 100 37
 CHQ57_02000  412445 ..  412464 -    -5  -4.73388   AATCTGTATGAAAAA            CACACTAA CTCA TTTGTGTG             TCAGTAACATGATCA  75 89
 CHQ57_01995  412119 ..  412139 - -15.4  -5.24796   GCCAGACAACAAAAA            GCCCCGGC GACTG GCCGGGGC            TGCTGGATACGGGTG 100 47
 CHQ57_01860  382114 ..  382125 -  -7.2  -3.01924   GAGGCTGCGCCAACA                CCCG TACC CGGG                 TGATCGCCGTCGGGG  52 173
 CHQ57_01845  377582 ..  377600 -   -16  -4.34402   CGGCTCATAGCAAAA             GACCGCCC ATC GGGCGGTC             TTGTCGTTTCTGGTG 100 55
        rsmD  364827 ..  364839 -  -2.6  -2.64422   ATAGAGTTGATAGCA                GACC TGACC GGCC                TGCTTGCCTTTGAGT  38 96
 CHQ57_01785  364436 ..  364458 - -12.1  -4.13561   TGTGGGGAAAAAAGA           GAAGGAGTG ACCAG CACTCCTTC           CTGAACCATGACAGT  95 48
 CHQ57_01770  362072 ..  362100 - -21.1  -4.82863   GAAGTAGAAAAGAAA        CAGCCCAGCAAGC GTA GCCTGCTGGGCTG        TGGGTCAGGCTGACC 100 95
 CHQ57_01765  360527 ..  360540 -  -4.5  -3.32727   GCAAGAGGATATCAA               GCTGA TTGA CCAGC                TGGGTCATGGGGACG  51 505
 CHQ57_01745  356346 ..  356362 - -13.7  -4.23054   ATACAGCATTGAAAA              CGGAGCC CGG GGCTCCG              TTTTTTTATTTGCCT 100 50
 CHQ57_01735  354497 ..  354518 - -10.9  -2.71924   GAGCGGGTGGGAAAC           CAGACCATC GCAT GATGGCCTG            TCCGGATTATTTGAG  70 32
 CHQ57_01730  353555 ..  353611 - -21.2  -3.15663   AGCCACTTCCAGTAA CAGTGCGCTGCAATGAAACAGGCCACC TTCG GGTGGCCTGTTTCATTGCAAT-CACTC AATAATGGGCATGGG 100 20
 CHQ57_01720 NONE
 CHQ57_01715  350460 ..  350489 - -11.5  -4.60487   CACGATCGCCAAAAA       CAGAAGAGCTGCCC GAT GGGCGGCTCTT-TG       TATCAGCTAATTATT 100 50
 CHQ57_01705  347020 ..  347045 - -21.9  -3.48276   GCCCTTGCCATATAA         CACGGCCCCGC AACT GCGGGGCCGTG          TTGTTTGAGGCTGGG 100 77
 CHQ57_01675  340872 ..  340896 -  -7.8  -3.93556   AGGCACCCAATTAAA          CAGCGACGTG CACAT CACGACACTG          GCCGAGAGGATGACA  72 315
 CHQ57_01645  333707 ..  333728 -  -8.7  -2.52795   AATTGTTTGAATTGA           CGCTGCTAC CCGG GTATCAGCG            CGAATCCGAACCCCA  58 250
 CHQ57_01635  331997 ..  332008 -  -5.8  -3.94877   ATCGGGGAAGAAGAA                GTGC CTCG GCAC                 CACTTAATGGCAATT  65 111
 CHQ57_01630  330788 ..  330823 - -17.8  -3.54741   CATCATGCGTTGAAA    TACAGAACCCCCGATGC AGT ACATCGGGGGTTCTG-A    GTGGAGAAATGCTAG 100 82
 CHQ57_01570  314916 ..  314935 - -11.4  -5.52909   TAACAGGTAAAAAAA            GGCCCTGC ATGA ACAGGGCC             TCTCGGGATTCATTG 100 45
 CHQ57_01565  313992 ..  314012 - -12.6  -3.22298   TGGAGCCAGTATCAA            GCCAGCCT TTCAC AGGCTGGC            TTTTATGTTTTCGCC  81 41
 CHQ57_01555  312414 ..  312424 -  -2.4  -3.79419   TGCTGGCATAAAAGA                 GCCG GTT CCGC                 ACTTTTCTCCGTCAT  51 97
 CHQ57_01550  311987 ..  312019 -   -25  -3.66178   GGCCTGAATGGCAAA      CGCCCACCCACACC GGTCT GGTGTGGGTGGGCG      CTCATCAACACAGCG 100 46
 CHQ57_01545  311254 ..  311267 -  -9.5  -5.60689   TCAGACAACAAAAAA               CCCGC CTAG GCGGG                TTTTTTAATTCTTGC 100 92
 CHQ57_01540  308927 ..  308953 - -16.5  -3.56864   AAAAGGGGAGAAATA         GGCCGCCGCCC GGGAT GGGCGGCGGCG         ATTCATCAGAAGTTG 100 31
 CHQ57_01520 NONE
 CHQ57_01515  304335 ..  304365 -  -5.4  -5.20534   ATGAACCAATAAAAA       TACCCCACCGGA TGCAGTC TCTAGCGGGGTA       TTTCTATGTCACCGG  88 89
 CHQ57_01510  303666 ..  303683 - -12.7  -5.05153   AGTGGAAAAAAGAAA             GGGTGGC CGAG GCCACCC              TTGTACTGATTGCGA 100 46
 CHQ57_01505  301444 ..  301459 - -11.8  -4.72986   GACGTGCATGAAAAA              GGGGCC TGAT GGCCCC               TTTTTGCTGGCTGAC 100 49
 CHQ57_01490 NONE
 CHQ57_01485  297679 ..  297706 - -22.8  -5.24129   TTTGGCGATAAAAAA        CAGGGCCGGAGG TTTG CCTCCGGCCCTG         TTGCATTGTGCTTGT 100 49
 CHQ57_01480  296461 ..  296480 - -13.6  -3.04715   CATTGGCGGGAAAAG            CAGGGGGA GATC TCCCCCTG             AGGAACAAGATAACT  87 40
 CHQ57_01470  294622 ..  294644 -  -6.2  -4.58395   TTGAGTCTCTAAAAA           TGAGGGGATC TCT GAGCCCTTCA           TCCTCAGCCCTTCAC  74 140
 CHQ57_01420  279432 ..  279444 -  -2.7   -4.3208   GCGCATAATTCAAAA                CGAAT CGG ATTCA                AGACCTTCCTGGTTG  62 217
 CHQ57_01415  278407 ..  278428 - -12.3  -2.97439   AAGCTGATCAAATCA           GACGGATCC CGCA GGATCCGCC            GGGATCAGTTGTCGA  78 30
 CHQ57_01405 NONE
 CHQ57_01400 NONE
 CHQ57_01395 NONE
 CHQ57_01390 NONE
 CHQ57_01385 NONE
 CHQ57_01380  271929 ..  271952 -   -11  -3.14344   CAGCGTGTTGAGCAA          CGAAGAGGCC TGAG GGCCTCTTCT           TCATTCAGCTGGCCA  74 53
 CHQ57_01370  269338 ..  269370 - -13.4  -3.86897   TTCATCCCTGAGAAA      GTGGCGGGCGCC TATCCTCAC GGCGCCAGCCAC      CAAGATAACCGTGTG 100 436
 CHQ57_01360  268190 ..  268218 -  -5.1  -4.42721   GAAGTAGACAAGAAA        CAGCCTAGCGAGC GTA GCCTGCTGTGCTG        TGCTGTGCTGTGCTG  70 225
 CHQ57_01180  245579 ..  245600 - -14.5  -3.92869   GGATGGATTGAGAAA           GGGCGTATC CGTG GATACGCCC            TTTTGCATTATCAGG 100 36
        greB  242784 ..  242799 -  -6.1  -3.05463   ATGTCCGGGAGGGAA              GGGCA CTATGC TGCCC               GGTATGGCGGGGAGG  53 60
 CHQ57_01160  240161 ..  240174 -  -9.5  -5.00884   AGGCCTTGTAAAAAA               GCCCC TCGC GGGGC                TTTTTTCATTTCTTG  95 31
 CHQ57_01155  238724 ..  238742 -  -8.8  -2.73364   TTCTTATGGCAAGTA             CCCGCAGG AAG CCTGCAAG             GCATTCAACCGGCTG  57 157
 CHQ57_01130  235761 ..  235771 -  -3.2   -3.4096   AACATATGTCAAATA                 TACC TAT GGCA                 GCCTGATGTGGCTGA  47 64
 CHQ57_01125  235002 ..  235024 - -14.8  -4.34402   TGTCGGATAGCAAAA           GGCCCTGCCA GAT TGGCGGGGCC           TTTTCATGTGCGGTC 100 83
 CHQ57_01105 NONE
 CHQ57_01100  229697 ..  229717 - -12.6  -4.83169   ATGCTGCGATAAAAA            CAGCCTGC GTAAT GCAGGCTG            TTTGTCATCTGGACC 100 55
 CHQ57_01090  227832 ..  227847 -  -3.2  -3.33525   GGGATGGAGAGAACA              GGCG GGAGGATG CGCC               ATCATGGCTGGTAAA  47 61
 CHQ57_01085  226868 ..  226894 -  -8.6  -3.01924   GACGGGCTGGGAACA         CGAGTTTCGCGC GCT GCGCCACACCCG         TCTCTCGCTCATCTA  56 510
 CHQ57_01060  221985 ..  222002 -  -8.4  -4.96106   CATAAAGATGAAAAA             GGCCTC ACATCG GAGGCC              TTTTTGACAGCGGTT  93 45
        pssA  220459 ..  220478 -   -15    -5.252   GATCCTGACAAAAAA            GCCTGCCG AAAA CGGCAGGC             CTTTGCACTGGTGTC 100 73
 CHQ57_01050 NONE
 CHQ57_01045  216062 ..  216092 - -18.5  -3.62864   TAAAGCTATCTGAAA       CAAACAAGGCCTC GTGAT GAGGCCTTGTTTG       TTTTACGGAACGCTG 100 28
 CHQ57_01035  213986 ..  214027 -  -6.4  -2.78679   GTGGTGCAGGCAAAG GCCAGCGGCATACCGACC GAGACA GGCCGTTTTGCTGCCGAC  ATGAAGGTGGCGCTG  50 166
        glnA  208896 ..  208911 - -11.8  -5.39721   CTATCAGAGAAAAAA              CCCGCC TGTT GGCGGG               TTTGGTCAAGTTCAG 100 55
 CHQ57_01010  208223 ..  208239 - -10.9  -3.26545   GCTATACACCAGTAA              TGCACCA ACG TGGTGCA              TTTAGTCTACCCGTA  74 54
 CHQ57_01005 NONE
 CHQ57_01000  205628 ..  205649 - -14.5  -3.66166   CTCTCAAAAAAGATA           CCCCGTTTG AAAT CAAACGGGG            TCTTATTGGTCAGGG 100 80
 CHQ57_00995  204507 ..  204538 - -17.6  -3.05596   TAGCCCTGCACCGAA      GATAAAAAAACCGC CTCG GCGGTTTTTTTATC       GGGTAAGCAAACCGT 100 48
 CHQ57_00970  199736 ..  199775 - -14.5  -2.85354   CAGTTGAACTGAAAG  TCTTTCAATCAGCGGAG GGTCAG CTCCGCTAATTGCAAGA   GAGAAGCAGCAGGAA  90 55
 CHQ57_00920 NONE
 CHQ57_00915 NONE
 CHQ57_00910  189241 ..  189263 -  -4.7  -3.14344   GATGTTGCGCAGTAA           TGGGGGCTG TCAGC CAGCCCACC           TCATGATCATGGTCA  49 50
 CHQ57_00905  187688 ..  187723 - -10.5  -2.80816   CGTTGAGTGACGAGA    GATCCGGACATCCCCT TCGGG AGGCGACG-CCGGATC    TGGGTTGTGCTGACT  70 56
 CHQ57_00900  186159 ..  186178 -   -15  -3.40299   TCATGAGATGGAGAA            GGGCAGCC GCAG GGCTGCCC             TTCTCGTTATCTATG 100 62
 CHQ57_00885  183531 ..  183566 -  -6.8  -2.89921   ATCAAGGGGTACATA    GAGACGGTACGCGGCAA GCA TGGCGGCAT-CCGCCTC    GGTCGCTCCGCCGTT  51 381
 CHQ57_00850  176313 ..  176325 -  -2.7  -3.14564   GTATCCGCGTATCAA                TATGC TAA ACATA                CCGCCGCTTGTAAAT  45 205
 CHQ57_00845  174758 ..  174773 -  -3.2  -2.78547   CTATTTCACGAATGA              GCGTCA TTTC TGATGC               TATTCGAGCTGGATC  41 25
 CHQ57_00840 NONE
        rarD NONE
 CHQ57_00830 NONE
 CHQ57_00825  171749 ..  171772 - -16.8  -3.75153   CCGTGTGAACGCAAA          GAGGGATGGC TCAG GCCATCCCTC           TTTTTTATGGGGTCG 100 49
 CHQ57_00815  166478 ..  166506 - -23.3  -4.07568   GGGCGTTTGCTAAAA        CAACAACGGGGGC TTG GCCCCCGTTGTTG        TTGATATGGATGGAA 100 47
 CHQ57_00800  162466 ..  162495 -  -9.3  -4.45517   AAATCAGGCATAAAA       TCATCATTCCCGC GAAA GCTGGGATGATGA        TTCTCTCATCTGGCC  90 263
 CHQ57_00780  160244 ..  160261 - -12.7   -5.5112   GCTAGCAATAAAAAA             GCCTGCC AGCT GGCAGGC              TCTTGCGTGGGCACC 100 43
 CHQ57_00765  158301 ..  158330 - -21.5  -4.01888   AGGGGAGATCAGAAA       CCCGGCCACCGACG GGG CG-CGGTGGCCGGG       TGAATTGTAAAGAGT 100 60
 CHQ57_00760  157364 ..  157377 -  -5.3  -2.98823   TTTTCTGGAGAGAGA               CAATG CAGG CATTG                ATCACCACGGCTCAC  50 222
 CHQ57_00750  156404 ..  156425 -  -4.5  -4.08767   CGCAGCCTTTCAAAA           TATCCTCCT TCAA AAGAGAATA            TATACTTTTGGATGC  62 333
 CHQ57_00740  154306 ..  154332 -  -7.9  -2.94144   TCTCTAGCTAAATCA         GCTCGGCAAAC GAAAT GTGAGCCGAGC         TTTTCAACACAAATA  58 56
 CHQ57_00730  150001 ..  150018 - -14.1  -4.91573   AAAAGAGACTAAAAA             CCGGCCC GTGC GGGCCGG              TCATCGGGTTGAGAG 100 54
 CHQ57_00725 NONE
 CHQ57_00720 NONE
 CHQ57_00715  146179 ..  146196 - -12.7  -5.40625   AGAGGACATAAAAAA             GGCCCAC TTCC GTGGGCC              TCTTGCTGAGAGCAG 100 46
 CHQ57_00705  143951 ..  143989 - -13.9  -2.51133   GATTCATCGAGGAAC  TCCTGCACCCCGCCCGTC GAGG GACGGGCGGGGTG-ATCA   TGCTCAGTAGTGAAT  84 29
        fghA  143081 ..  143099 - -11.7  -4.84219   AAAGTAGAAAATAAA             CAGGCCC TTCAT GGGCCTG             TTTTGATCAGAGATG 100 32
 CHQ57_00690  139758 ..  139785 - -21.4  -4.14243   CACCCGAGTTGAAAA        GAGAGGGAGGCC AGCT GGCCTCCCTCTC         TTGTTTCTCCGGCTT 100 61
 CHQ57_00645  130680 ..  130707 - -16.4  -3.90092   ATAGCTATATAAGAA        GAGAAGCCCGGCA TCA TGCCGGGCTTC-C        TGTTTGTGGGGGCTG 100 42
 CHQ57_00635 NONE
 CHQ57_00630  126787 ..  126809 - -20.6  -4.28254   CTGCAAGATTGAAAA           CGGGCCGCTC CAT GAGCGGCCCG           TTTGTTTTTGGCGGG 100 48
 CHQ57_00605 NONE
 CHQ57_00600  121112 ..  121134 - -10.5  -4.08394   AGAGGGGGCGGAAAA           GGGCGCCAG CATAC CCAGCGCCC           GCCTGGATGAAAAGA  88 47
        trmL  120319 ..  120337 -  -5.9   -3.6502   GATCGCCGAGGCAAA             CCGCCAG TTGCC CTGGCTG             ATCCTGATGCCGTTA  57 298
        plsB  114352 ..  114374 - -17.8  -4.91511   ATGTCAGGATAAAAA           GAAGGCCGCA TCA TGCGGCCTTC           TTTGTTTCCGGTCTC 100 43
 CHQ57_00555  112303 ..  112336 -  -3.9  -4.11216   TTTTCATTTCGAAAA    CAGCGACAGGGCCAC CTTGGT GTGGCCC--TCGCTT     AAGGCTTGTATCTGT  60 40
 CHQ57_00550  111601 ..  111626 - -16.1  -2.91912   CCACGCATTGAGAGA         GCAGGCGGGCC TTGG GGCCCGCCTGA          TTTTTTGTGCGGCTC 100 480
        cmtB  108663 ..  108678 -  -3.9  -3.14132   GGCGCCGCTCAGTAA              CGCGC CAGAAT GCGCA               AAATGTCGTCTTTGG  47 3
 CHQ57_00520  108307 ..  108324 -  -8.3  -3.14013   CAATCAGATGGAAGA             GGCGGCC CGCA GGCCGCG              AAGTCAGGTGGTCAG  63 37
 CHQ57_00515  106982 ..  107000 -   -16  -5.24531   AGTGGCCATAAAAAA             CGGAGCGC CAG GCGCTCCG             TTTTTGTTTTCCGTA 100 51
 CHQ57_00500  103497 ..  103516 -   -15  -3.74077   GCTGACAGATGCAAA            CAGGGCCC TTTC GGGCCCTG             TTTCGTCATGCCGGC 100 57
 CHQ57_00490  101442 ..  101455 -  -8.1  -5.66229   AGCAAGAAGAAAAAA               GCCTG TCTG CAGGC                GGATTATGACGAGCT 100 297
       coaBC NONE
 CHQ57_00450 NONE
 CHQ57_00445   95319 ..   95342 -   -11  -5.24129   TTTTGCCATAAAAAA          CAAGGGAGGC CAAG GCCTCCCTTT           GTGTATCCACCCGAA 100 46
 CHQ57_00440   94326 ..   94357 - -23.2  -3.85698   CCTGGGTTTCAGAAA      CGACAATGCCAGCC CCGG GGCTGGCATTGTCG       TGATCGTCTGCGCAG 100 44
 CHQ57_00430   91907 ..   91927 - -18.3  -5.29782   GACAGCTATAAAAAA            GCCCCGCTC ATC GAGCGGGGC            TTTTGCATTCAGAAA 100 52
 CHQ57_00420   89212 ..   89228 -  -4.4  -2.52464   CCCCTCGCTAATCTA             TGCGCCG GTCA CGGC-CA              CCCCGTCAGCGCAGT  44 31
 CHQ57_00410 NONE
 CHQ57_00405   85275 ..   85293 -   -16  -3.82486   ACCCAACACGAAGAA             CCCCGCTC ATC GAGCGGGG             TTTTTTATTTCCTGA 100 79
 CHQ57_00380   78845 ..   78878 - -10.9   -4.6902   GCACAAGCCCAAAAA     TTGACAGCCCCCTTG CAAG CTTGGGGGCTGTCAT      CACTCGAAGAGGTGC 100 67
 CHQ57_00360 NONE
 CHQ57_00355   73595 ..   73612 - -12.7  -5.27335   TTCGGTAAACAAAAA             GAGCCGG CAAG CCGGCTC              AGAATTTCTCGGGTC 100 24
        purE NONE
 CHQ57_00345   71872 ..   71898 - -16.6  -4.79223   TGACAGCATGAAAAA         GAAGACCCGGGC TTG GCCCGGGTCTTT         GCATTCAAGGGAGTA 100 30
 CHQ57_00325   67549 ..   67583 -  -2.9  -4.38712   GCTATTGGGAGAAAA    TGACGTGAAGGGGG GATTTGCT CCCCCTCCAT-TCA     GCTCAAGTCATGAAC  62 33
 CHQ57_00315   64495 ..   64512 -  -2.7  -2.64616   GTTGGATCGACATTA             GCGAGCGA ATG TCACT-GC             TTCACGAGTTGGCTG  38 365
 CHQ57_00300   60633 ..   60648 - -11.8  -4.52857   ATCCTGGATAGAAAA              GGGGCC CAAA GGCCCC               TTTATGCAGCAACGC 100 45
 CHQ57_00295 NONE
 CHQ57_00290   57187 ..   57197 -  -2.4  -4.52857   ATGTTGTACATAAAA                 GCCC ATG GTGC                 ACCCGGGATGGTTCT  63 296
 CHQ57_00285   56423 ..   56439 -  -2.9  -2.66274   TTGCTTACAATCAAG              CTGAACA TGT TGACCAG              GCTTCGAGGGGGGGG  40 4
 CHQ57_00280 NONE
 CHQ57_00275   54969 ..   54982 -  -3.7  -4.24342   TTTGTTACCAATAAA               CGGGC TTTT GCCGG                CGAGGATATCCACCG  62 189
 CHQ57_00250   49143 ..   49157 -  -3.5  -3.16564   CGCCGAGGCCATCAA               CCTGC AACTG GCAGA               ACTGGGCGGCCACGC  45 504
 CHQ57_00240   47430 ..   47455 - -11.1   -4.6526   ACAAAGGGCTAAAAA         CAATGACCGCC TCTC GGCGGTCACGG          TGTTTTCTTTGGGAT 100 143
        trpS   45894 ..   45918 -    -2  -2.73364   CGCCGATGCCAATCA         CTTCTCGCCCC GGCT GTGGCGCGA-G          CCCTGGTTCAACAAC  39 475
 CHQ57_00225 NONE
 CHQ57_00220   44179 ..   44195 - -15.1  -6.02919   GCAGAAATAAAAAAA              CCGGCGC AAA GCGCCGG              TAGAGGGGACAAATC 100 108
 CHQ57_00210   42346 ..   42392 -  -2.9  -3.46602   GGCTGGAGAGCAGAA GCCACT-TCGAACAGCTGCTCGA CGA TCG-GCTGGCGACCGAGAGCGGC AGTTTCAGCCTGTTG  47 400
 CHQ57_00195   39743 ..   39765 - -16.4  -5.60993   CGGCGGATAAAAAAA           CGGCTGGAAT CAT ATTCCAGCCG           ATCAAAGTATTCGTT 100 147
 CHQ57_00185 NONE
 CHQ57_00180   38558 ..   38581 -   -16   -3.4314   TAAATGGGAAGAACA          GTCGGCACCC GGGC GGGCGCCGAC           CATGGGAAATTACTT 100 43
 CHQ57_00175   36326 ..   36347 - -11.5  -3.08032   GTCTCTGTAAAAGCA           GCAGGCGGC TTGC GCCGCCTGT            TTTCAGTTCTTTTGT  75 28
 CHQ57_00170 NONE
 CHQ57_00165   34411 ..   34429 -  -8.8  -4.64763   GGATCCAAAAAATAA             CCAGCGCT AGA AGCGCTCG             AAGAACGCCAGGGTC  88 13
 CHQ57_00160   33464 ..   33515 - -17.4  -3.38046   TCTCGATTTGAAATA GCTGCCAGACAGCATGGATACCAC AGTC GTGGTATCCATGCTGTCACGGATC AGGCTGCGCCAGCAG 100 24
 CHQ57_00130   31402 ..   31412 -  -2.4  -3.12895   TTTTTCATGAACAGA                 CTCC TGA GGTG                 GAAAAATTGGGGGTT  42 4
 CHQ57_00125   30076 ..   30106 -  -8.2  -2.78715   AACCCCTGGATCAGA       TCAGAACTGGCGCC ATA GTAGCCAGTGCTGA       CGGTGATCACCGTGT  60 180
 CHQ57_00105   23517 ..   23543 -  -8.7  -3.88291   CATGATGGGGATAAA        GCG-GCTGGCTC ACAA GAGCCAGCACTC         AGTTATGTTGGATTG  74 24
 CHQ57_00100   21976 ..   21991 - -11.8  -5.22312   ACGGACATGAAAAAA              CCCGGC CTGG GCCGGG               TTGCTAGGAAGAGGG 100 150
 CHQ57_00095 NONE
 CHQ57_00090 NONE
        kdpB   17477 ..   17509 -  -9.8  -3.29144   CCAGGCCTGTGATAA      CCCGGTCGATCGGC TTGAT GCCGATTAATCGGG      TGCACCAGCAGGCCA  72 409
 CHQ57_00080 NONE
 CHQ57_00075   14121 ..   14135 -  -2.1  -3.60627   TGAGGCGAGGGGAAA               TAGCA CTCTC TGCCA               TCGCTGTGAGCCATA  49 50
 CHQ57_00070   13296 ..   13325 -   -10  -3.59979   GCGTTCCACGTGAAA       CATCAGCTGCCG ATAAAG CGGTAGCCGATG        CCGGATTCGGTCTCG  77 90
 CHQ57_00060   11179 ..   11202 -  -8.1  -3.59262   CTGGATACCGCCAAA          CTGGGACAG GAGATG CTGGCCCAG           CAGCAGGAAGCATCC  64 108
 CHQ57_00050    9503 ..    9520 - -12.7  -4.88711   ACAAGAGATGAAAAA             GGCCTGC GATT GCAGGCC              TTTTTGTTTTTGGCA 100 48
 CHQ57_00035 NONE
 CHQ57_00030    7048 ..    7074 -  -8.7  -4.62203   TTGAAATAACGAAAA         TGCCGAACGCC TGATT AGCGTTTGGCA         TTTTTCCTGATGTAC  88 61
 CHQ57_00025    6098 ..    6116 - -11.7  -3.80018   GTCAGACAGCAATAA             GCCGCTC CTTGT GAGCGGC             TTTTTTACATCTGCA  88 51
