locus-tag class description NP805_00005 PF00308 Bacterial dnaA protein NP805_00005 PF08299 Bacterial dnaA protein helix-turn-helix NP805_00005 PF11638 DnaA N-terminal domain NP805_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NP805_00010 PF02767 DNA polymerase III beta subunit, central domain NP805_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NP805_00015 PF02463 RecF/RecN/SMC N terminal domain NP805_00020 PF01751 Toprim domain NP805_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_00020 PF00986 DNA gyrase B subunit, carboxyl terminus NP805_00020 PF00204 DNA gyrase B NP805_00020 PF18053 DNA gyrase B subunit insert domain NP805_00035 PF08279 HTH domain NP805_00035 PF13280 WYL domain NP805_00040 PF01965 DJ-1/PfpI family NP805_00040 PF12833 Helix-turn-helix domain NP805_00045 PF12706 Beta-lactamase superfamily domain NP805_00050 PF00011 Hsp20/alpha crystallin family NP805_00055 PF00011 Hsp20/alpha crystallin family NP805_00060 PF00155 Aminotransferase class I and II NP805_00075 PF07690 Major Facilitator Superfamily NP805_00080 PF00072 Response regulator receiver domain NP805_00080 PF00486 Transcriptional regulatory protein, C terminal NP805_00085 PF00512 His Kinase A (phospho-acceptor) domain NP805_00085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_00085 PF02702 Osmosensitive K+ channel His kinase sensor domain NP805_00085 PF13493 Domain of unknown function (DUF4118) NP805_00085 PF13492 GAF domain NP805_00090 PF02669 K+-transporting ATPase, c chain NP805_00100 PF03814 Potassium-transporting ATPase A subunit NP805_00125 PF02810 SEC-C motif NP805_00125 PF07517 SecA DEAD-like domain NP805_00125 PF01043 SecA preprotein cross-linking domain NP805_00125 PF07516 SecA Wing and Scaffold domain NP805_00165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NP805_00165 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP805_00170 PF00512 His Kinase A (phospho-acceptor) domain NP805_00170 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP805_00170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_00175 PF00873 AcrB/AcrD/AcrF family NP805_00180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP805_00185 PF00440 Bacterial regulatory proteins, tetR family NP805_00220 PF12146 Serine aminopeptidase, S33 NP805_00225 PF12105 SpoU, rRNA methylase, C-terminal NP805_00225 PF00588 SpoU rRNA Methylase family NP805_00230 PF02824 TGS domain NP805_00230 PF04607 Region found in RelA / SpoT proteins NP805_00230 PF13291 ACT domain NP805_00235 PF01192 RNA polymerase Rpb6 NP805_00240 PF00625 Guanylate kinase NP805_00245 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NP805_00260 PF00892 EamA-like transporter family NP805_00280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_00280 PF03466 LysR substrate binding domain NP805_00285 PF00579 tRNA synthetases class I (W and Y) NP805_00290 PF00582 Universal stress protein family NP805_00295 PF12241 Trans-2-enoyl-CoA reductase catalytic region NP805_00295 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NP805_00295 PF07055 Enoyl reductase FAD binding domain NP805_00300 PF00990 Diguanylate cyclase, GGDEF domain NP805_00300 PF08448 PAS fold NP805_00305 PF00210 Ferritin-like domain NP805_00315 PF01810 LysE type translocator NP805_00335 PF13808 DDE_Tnp_1-associated NP805_00335 PF01609 Transposase DDE domain NP805_00340 PF05598 Transposase domain (DUF772) NP805_00340 PF01609 Transposase DDE domain NP805_00345 PF00072 Response regulator receiver domain NP805_00345 PF00512 His Kinase A (phospho-acceptor) domain NP805_00345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_00345 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP805_00355 PF07694 5TMR of 5TMR-LYT NP805_00355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_00355 PF06580 Histidine kinase NP805_00360 PF04397 LytTr DNA-binding domain NP805_00360 PF00072 Response regulator receiver domain NP805_00365 PF07690 Major Facilitator Superfamily NP805_00370 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NP805_00370 PF02222 ATP-grasp domain NP805_00375 PF00731 AIR carboxylase NP805_00390 PF03466 LysR substrate binding domain NP805_00390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_00395 PF07715 TonB-dependent Receptor Plug Domain NP805_00395 PF00593 TonB dependent receptor NP805_00400 PF01177 Asp/Glu/Hydantoin racemase NP805_00440 PF00899 ThiF family NP805_00445 PF02657 Fe-S metabolism associated domain NP805_00450 PF00266 Aminotransferase class-V NP805_00455 PF13361 UvrD-like helicase C-terminal domain NP805_00455 PF00580 UvrD/REP helicase N-terminal domain NP805_00460 PF00563 EAL domain NP805_00460 PF00990 Diguanylate cyclase, GGDEF domain NP805_00460 PF03707 Bacterial signalling protein N terminal repeat NP805_00470 PF00107 Zinc-binding dehydrogenase NP805_00470 PF08240 Alcohol dehydrogenase GroES-like domain NP805_00475 PF00155 Aminotransferase class I and II NP805_00480 PF08360 QacR-like protein, C-terminal region NP805_00480 PF00440 Bacterial regulatory proteins, tetR family NP805_00485 PF01370 NAD dependent epimerase/dehydratase family NP805_00490 PF13439 Glycosyltransferase Family 4 NP805_00490 PF00534 Glycosyl transferases group 1 NP805_00505 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) NP805_00520 PF13657 HipA N-terminal domain NP805_00520 PF07804 HipA-like C-terminal domain NP805_00530 PF04851 Type III restriction enzyme, res subunit NP805_00530 PF08463 EcoEI R protein C-terminal NP805_00530 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) NP805_00530 PF00271 Helicase conserved C-terminal domain NP805_00535 PF12161 HsdM N-terminal domain NP805_00535 PF02384 N-6 DNA Methylase NP805_00540 PF01420 Type I restriction modification DNA specificity domain NP805_00545 PF07516 SecA Wing and Scaffold domain NP805_00545 PF01043 SecA preprotein cross-linking domain NP805_00545 PF07517 SecA DEAD-like domain NP805_00545 PF02810 SEC-C motif NP805_00555 PF03755 YicC-like family, N-terminal region NP805_00555 PF08340 Domain of unknown function (DUF1732) NP805_00560 PF01138 3' exoribonuclease family, domain 1 NP805_00560 PF03725 3' exoribonuclease family, domain 2 NP805_00565 PF00156 Phosphoribosyl transferase domain NP805_00570 PF00403 Heavy-metal-associated domain NP805_00575 PF13411 MerR HTH family regulatory protein NP805_00580 PF00360 Phytochrome region NP805_00580 PF01590 GAF domain NP805_00580 PF00990 Diguanylate cyclase, GGDEF domain NP805_00580 PF00563 EAL domain NP805_00585 PF06288 Protein of unknown function (DUF1040) NP805_00590 PF12801 4Fe-4S binding domain NP805_00590 PF13746 4Fe-4S dicluster domain NP805_00590 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase NP805_00595 PF01636 Phosphotransferase enzyme family NP805_00600 PF01323 DSBA-like thioredoxin domain NP805_00605 PF00528 Binding-protein-dependent transport system inner membrane component NP805_00610 PF00005 ABC transporter NP805_00620 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NP805_00620 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NP805_00625 PF00857 Isochorismatase family NP805_00640 PF01553 Acyltransferase NP805_00645 PF01078 Magnesium chelatase, subunit ChlI NP805_00645 PF13335 Magnesium chelatase, subunit ChlI C-terminal NP805_00650 PF00205 Thiamine pyrophosphate enzyme, central domain NP805_00650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NP805_00650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NP805_00660 PF01063 Amino-transferase class IV NP805_00665 PF00920 Dehydratase family NP805_00670 PF00291 Pyridoxal-phosphate dependent enzyme NP805_00670 PF00585 C-terminal regulatory domain of Threonine dehydratase NP805_00675 PF00691 OmpA family NP805_00675 PF01389 OmpA-like transmembrane domain NP805_00685 PF00440 Bacterial regulatory proteins, tetR family NP805_00695 PF00270 DEAD/DEAH box helicase NP805_00695 PF00271 Helicase conserved C-terminal domain NP805_00695 PF17764 3′ DNA-binding domain (3′BD) NP805_00695 PF18074 Primosomal protein N C-terminal domain NP805_00695 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NP805_00700 PF01197 Ribosomal protein L31 NP805_00705 PF13460 NAD(P)H-binding NP805_00705 PF11066 Protein of unknown function (DUF2867) NP805_00710 PF03949 Malic enzyme, NAD binding domain NP805_00710 PF00390 Malic enzyme, N-terminal domain NP805_00720 PF00672 HAMP domain NP805_00720 PF00512 His Kinase A (phospho-acceptor) domain NP805_00720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_00725 PF00486 Transcriptional regulatory protein, C terminal NP805_00725 PF00072 Response regulator receiver domain NP805_00730 PF05958 tRNA (Uracil-5-)-methyltransferase NP805_00760 PF16221 winged helix-turn-helix NP805_00760 PF16254 Domain of unknown function (DUF4910) NP805_00760 PF09940 Domain of unknown function (DUF2172) NP805_00785 PF08666 SAF domain NP805_00785 PF03102 NeuB family NP805_00795 PF02348 Cytidylyltransferase NP805_00820 PF13193 AMP-binding enzyme C-terminal domain NP805_00820 PF00501 AMP-binding enzyme NP805_00835 PF00535 Glycosyl transferase family 2 NP805_00840 PF03275 UDP-galactopyranose mutase NP805_00855 PF00534 Glycosyl transferases group 1 NP805_00865 PF13537 Glutamine amidotransferase domain NP805_00865 PF00733 Asparagine synthase NP805_00870 PF05598 Transposase domain (DUF772) NP805_00870 PF01609 Transposase DDE domain NP805_00880 PF01370 NAD dependent epimerase/dehydratase family NP805_00885 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NP805_00885 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NP805_00890 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NP805_00895 PF02719 Polysaccharide biosynthesis protein NP805_00900 PF00128 Alpha amylase, catalytic domain NP805_00900 PF02903 Alpha amylase, N-terminal ig-like domain NP805_00915 PF00012 Hsp70 protein NP805_00920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NP805_00920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NP805_00925 PF05981 CreA protein NP805_00935 PF01258 Prokaryotic dksA/traR C4-type zinc finger NP805_00940 PF01609 Transposase DDE domain NP805_00940 PF05598 Transposase domain (DUF772) NP805_00945 PF00120 Glutamine synthetase, catalytic domain NP805_00950 PF00202 Aminotransferase class-III NP805_00955 PF13416 Bacterial extracellular solute-binding protein NP805_00960 PF13416 Bacterial extracellular solute-binding protein NP805_00965 PF08402 TOBE domain NP805_00965 PF00005 ABC transporter NP805_00970 PF00528 Binding-protein-dependent transport system inner membrane component NP805_00975 PF00528 Binding-protein-dependent transport system inner membrane component NP805_00980 PF03475 3-alpha domain NP805_00980 PF03473 MOSC domain NP805_00995 PF03061 Thioesterase superfamily NP805_01000 PF00570 HRDC domain NP805_01000 PF09382 RQC domain NP805_01000 PF16124 RecQ zinc-binding NP805_01000 PF00271 Helicase conserved C-terminal domain NP805_01000 PF00270 DEAD/DEAH box helicase NP805_01005 PF00034 Cytochrome c NP805_01010 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NP805_01020 PF02592 Putative vitamin uptake transporter NP805_01025 PF03737 Aldolase/RraA NP805_01030 PF00672 HAMP domain NP805_01030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_01035 PF00571 CBS domain NP805_01035 PF01769 Divalent cation transporter NP805_01035 PF03448 MgtE intracellular N domain NP805_01040 PF10414 Sirohaem synthase dimerisation region NP805_01040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NP805_01040 PF14824 Sirohaem biosynthesis protein central NP805_01045 PF01226 Formate/nitrite transporter NP805_01050 PF13806 Rieske-like [2Fe-2S] domain NP805_01060 PF04324 BFD-like [2Fe-2S] binding domain NP805_01060 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NP805_01060 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NP805_01060 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP805_01060 PF18267 Rubredoxin NAD+ reductase C-terminal domain NP805_01065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_01065 PF03466 LysR substrate binding domain NP805_01070 PF07690 Major Facilitator Superfamily NP805_01075 PF00004 ATPase family associated with various cellular activities (AAA) NP805_01075 PF07724 AAA domain (Cdc48 subfamily) NP805_01075 PF10431 C-terminal, D2-small domain, of ClpB protein NP805_01080 PF00227 Proteasome subunit NP805_01090 PF03485 Arginyl tRNA synthetase N terminal domain NP805_01090 PF00750 tRNA synthetases class I (R) NP805_01090 PF05746 DALR anticodon binding domain NP805_01100 PF04545 Sigma-70, region 4 NP805_01100 PF04542 Sigma-70 region 2 NP805_01115 PF02673 Bacitracin resistance protein BacA NP805_01120 PF00248 Aldo/keto reductase family NP805_01125 PF01263 Aldose 1-epimerase NP805_01130 PF08544 GHMP kinases C terminal NP805_01130 PF00288 GHMP kinases N terminal domain NP805_01130 PF10509 Galactokinase galactose-binding signature NP805_01135 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NP805_01135 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NP805_01140 PF16363 GDP-mannose 4,6 dehydratase NP805_01145 PF00356 Bacterial regulatory proteins, lacI family NP805_01150 PF00703 Glycosyl hydrolases family 2 NP805_01150 PF02929 Beta galactosidase small chain NP805_01150 PF02837 Glycosyl hydrolases family 2, sugar binding domain NP805_01150 PF16353 Domain of unknown function(DUF4981) NP805_01150 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NP805_01155 PF13407 Periplasmic binding protein domain NP805_01160 PF00005 ABC transporter NP805_01165 PF02653 Branched-chain amino acid transport system / permease component NP805_01170 PF02743 Cache domain NP805_01170 PF00672 HAMP domain NP805_01170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_01195 PF00696 Amino acid kinase family NP805_01200 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NP805_01200 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NP805_01205 PF03606 C4-dicarboxylate anaerobic carrier NP805_01210 PF01316 Arginine repressor, DNA binding domain NP805_01210 PF02863 Arginine repressor, C-terminal domain NP805_01215 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain NP805_01215 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain NP805_01220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NP805_01220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NP805_01235 PF02666 Phosphatidylserine decarboxylase NP805_01240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_01240 PF00672 HAMP domain NP805_01240 PF02743 Cache domain NP805_01245 PF08212 Lipocalin-like domain NP805_01250 PF06719 AraC-type transcriptional regulator N-terminus NP805_01250 PF12833 Helix-turn-helix domain NP805_01255 PF00465 Iron-containing alcohol dehydrogenase NP805_01260 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NP805_01260 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NP805_01260 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NP805_01265 PF02233 NAD(P) transhydrogenase beta subunit NP805_01275 PF08348 YheO-like PAS domain NP805_01275 PF13309 HTH domain NP805_01280 PF03313 Serine dehydratase alpha chain NP805_01285 PF00375 Sodium:dicarboxylate symporter family NP805_01290 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP805_01290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NP805_01295 PF13525 Outer membrane lipoprotein NP805_01300 PF00849 RNA pseudouridylate synthase NP805_01300 PF01479 S4 domain NP805_01305 PF02578 Multi-copper polyphenol oxidoreductase laccase NP805_01310 PF10431 C-terminal, D2-small domain, of ClpB protein NP805_01310 PF02861 Clp amino terminal domain, pathogenicity island component NP805_01310 PF17871 AAA lid domain NP805_01310 PF00004 ATPase family associated with various cellular activities (AAA) NP805_01310 PF07724 AAA domain (Cdc48 subfamily) NP805_01315 PF03590 Aspartate-ammonia ligase NP805_01320 PF01037 Lrp/AsnC ligand binding domain NP805_01330 PF10063 Uncharacterized integral membrane protein (DUF2301) NP805_01335 PF01368 DHH family NP805_01335 PF02272 DHHA1 domain NP805_01335 PF01743 Poly A polymerase head domain NP805_01335 PF00571 CBS domain NP805_01355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_01355 PF00512 His Kinase A (phospho-acceptor) domain NP805_01365 PF00158 Sigma-54 interaction domain NP805_01365 PF00072 Response regulator receiver domain NP805_01370 PF06496 Protein of unknown function (DUF1097) NP805_01375 PF00174 Oxidoreductase molybdopterin binding domain NP805_01380 PF01794 Ferric reductase like transmembrane component NP805_01395 PF00072 Response regulator receiver domain NP805_01395 PF00486 Transcriptional regulatory protein, C terminal NP805_01400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_01410 PF01568 Molydopterin dinucleotide binding domain NP805_01410 PF18364 Molybdopterin oxidoreductase N-terminal domain NP805_01410 PF00384 Molybdopterin oxidoreductase NP805_01415 PF03264 NapC/NirT cytochrome c family, N-terminal region NP805_01420 PF01131 DNA topoisomerase NP805_01420 PF01751 Toprim domain NP805_01425 PF02386 Cation transport protein NP805_01430 PF02080 TrkA-C domain NP805_01430 PF02254 TrkA-N domain NP805_01435 PF01565 FAD binding domain NP805_01435 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NP805_01440 PF02237 Biotin protein ligase C terminal domain NP805_01440 PF03099 Biotin/lipoate A/B protein ligase family NP805_01440 PF08279 HTH domain NP805_01445 PF00485 Phosphoribulokinase / Uridine kinase family NP805_01460 PF00009 Elongation factor Tu GTP binding domain NP805_01460 PF03144 Elongation factor Tu domain 2 NP805_01460 PF03143 Elongation factor Tu C-terminal domain NP805_01470 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NP805_01475 PF00467 KOW motif NP805_01475 PF02357 Transcription termination factor nusG NP805_01480 PF00298 Ribosomal protein L11, RNA binding domain NP805_01480 PF03946 Ribosomal protein L11, N-terminal domain NP805_01485 PF00687 Ribosomal protein L1p/L10e family NP805_01490 PF00466 Ribosomal protein L10 NP805_01495 PF00542 Ribosomal protein L7/L12 C-terminal domain NP805_01495 PF16320 Ribosomal protein L7/L12 dimerisation domain NP805_01500 PF10385 RNA polymerase beta subunit external 1 domain NP805_01500 PF04565 RNA polymerase Rpb2, domain 3 NP805_01500 PF04561 RNA polymerase Rpb2, domain 2 NP805_01500 PF00562 RNA polymerase Rpb2, domain 6 NP805_01500 PF04560 RNA polymerase Rpb2, domain 7 NP805_01500 PF04563 RNA polymerase beta subunit NP805_01505 PF04997 RNA polymerase Rpb1, domain 1 NP805_01505 PF04998 RNA polymerase Rpb1, domain 5 NP805_01505 PF05000 RNA polymerase Rpb1, domain 4 NP805_01505 PF00623 RNA polymerase Rpb1, domain 2 NP805_01505 PF04983 RNA polymerase Rpb1, domain 3 NP805_01510 PF13309 HTH domain NP805_01510 PF08348 YheO-like PAS domain NP805_01515 PF01042 Endoribonuclease L-PSP NP805_01520 PF02635 DsrE/DsrF-like family NP805_01525 PF02635 DsrE/DsrF-like family NP805_01530 PF04077 DsrH like protein NP805_01535 PF00164 Ribosomal protein S12/S23 NP805_01540 PF00177 Ribosomal protein S7p/S5e NP805_01545 PF03144 Elongation factor Tu domain 2 NP805_01545 PF00009 Elongation factor Tu GTP binding domain NP805_01545 PF03764 Elongation factor G, domain IV NP805_01545 PF00679 Elongation factor G C-terminus NP805_01545 PF14492 Elongation Factor G, domain II NP805_01550 PF00009 Elongation factor Tu GTP binding domain NP805_01550 PF03144 Elongation factor Tu domain 2 NP805_01550 PF03143 Elongation factor Tu C-terminal domain NP805_01600 PF00999 Sodium/hydrogen exchanger family NP805_01600 PF02254 TrkA-N domain NP805_01605 PF02525 Flavodoxin-like fold NP805_01620 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NP805_01620 PF00326 Prolyl oligopeptidase family NP805_01640 PF07947 YhhN family NP805_01645 PF07690 Major Facilitator Superfamily NP805_01650 PF13533 Biotin-lipoyl like NP805_01655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_01655 PF03466 LysR substrate binding domain NP805_01665 PF00375 Sodium:dicarboxylate symporter family NP805_01670 PF10678 Protein of unknown function (DUF2492) NP805_01675 PF01914 MarC family integral membrane protein NP805_01680 PF03466 LysR substrate binding domain NP805_01680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_01685 PF02416 mttA/Hcf106 family NP805_01695 PF01464 Transglycosylase SLT domain NP805_01695 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP805_01705 PF13091 PLD-like domain NP805_01715 PF00440 Bacterial regulatory proteins, tetR family NP805_01735 PF00448 SRP54-type protein, GTPase domain NP805_01735 PF02881 SRP54-type protein, helical bundle domain NP805_01740 PF00005 ABC transporter NP805_01745 PF18075 FtsX extracellular domain NP805_01750 PF00140 Sigma-70 factor, region 1.2 NP805_01750 PF04545 Sigma-70, region 4 NP805_01750 PF04542 Sigma-70 region 2 NP805_01755 PF00484 Carbonic anhydrase NP805_01760 PF00392 Bacterial regulatory proteins, gntR family NP805_01760 PF07702 UTRA domain NP805_01765 PF01979 Amidohydrolase family NP805_01770 PF00491 Arginase family NP805_01775 PF17392 Urocanase C-terminal domain NP805_01775 PF17391 Urocanase N-terminal domain NP805_01775 PF01175 Urocanase Rossmann-like domain NP805_01780 PF00221 Aromatic amino acid lyase NP805_01805 PF00990 Diguanylate cyclase, GGDEF domain NP805_01805 PF17157 Gammaproteobacterial periplasmic sensor domain NP805_01805 PF00563 EAL domain NP805_01835 PF00263 Bacterial type II and III secretion system protein NP805_01835 PF03958 Bacterial type II/III secretion system short domain NP805_01850 PF00437 Type II/IV secretion system protein NP805_01850 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NP805_01855 PF00482 Type II secretion system (T2SS), protein F NP805_01870 PF00114 Pilin (bacterial filament) NP805_01870 PF07963 Prokaryotic N-terminal methylation motif NP805_01875 PF13737 Transposase DDE domain NP805_01880 PF07963 Prokaryotic N-terminal methylation motif NP805_01880 PF14245 Type IV pilin PilA NP805_01910 PF04085 rod shape-determining protein MreC NP805_01915 PF04093 rod shape-determining protein MreD NP805_01920 PF02545 Maf-like protein NP805_01925 PF10150 Ribonuclease E/G family NP805_01925 PF00575 S1 RNA binding domain NP805_01930 PF13502 AsmA-like C-terminal region NP805_01930 PF13116 Protein of unknown function NP805_01940 PF00795 Carbon-nitrogen hydrolase NP805_01945 PF01523 Putative modulator of DNA gyrase NP805_01955 PF01914 MarC family integral membrane protein NP805_01960 PF07690 Major Facilitator Superfamily NP805_01970 PF00072 Response regulator receiver domain NP805_01975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_01975 PF00512 His Kinase A (phospho-acceptor) domain NP805_01975 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NP805_01975 PF00072 Response regulator receiver domain NP805_01975 PF01627 Hpt domain NP805_01975 PF00672 HAMP domain NP805_01980 PF13581 Histidine kinase-like ATPase domain NP805_01985 PF08678 Rsbr N terminal NP805_01985 PF01740 STAS domain NP805_01990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_01990 PF08447 PAS fold NP805_01990 PF13426 PAS domain NP805_01995 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) NP805_02005 PF08668 HDOD domain NP805_02020 PF00999 Sodium/hydrogen exchanger family NP805_02025 PF02310 B12 binding domain NP805_02025 PF00809 Pterin binding enzyme NP805_02025 PF02574 Homocysteine S-methyltransferase NP805_02025 PF02965 Vitamin B12 dependent methionine synthase, activation domain NP805_02025 PF02607 B12 binding domain NP805_02030 PF18030 RimK PreATP-grasp domain NP805_02030 PF08443 RimK-like ATP-grasp domain NP805_02035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_02040 PF00486 Transcriptional regulatory protein, C terminal NP805_02040 PF00072 Response regulator receiver domain NP805_02055 PF03440 Aerolysin/Pertussis toxin (APT) domain NP805_02055 PF01117 Aerolysin toxin NP805_02060 PF13667 ThiC-associated domain NP805_02060 PF01964 Radical SAM ThiC family NP805_02065 PF02581 Thiamine monophosphate synthase NP805_02070 PF00899 ThiF family NP805_02080 PF05690 Thiazole biosynthesis protein ThiG NP805_02085 PF04055 Radical SAM superfamily NP805_02085 PF06968 Biotin and Thiamin Synthesis associated domain NP805_02095 PF13302 Acetyltransferase (GNAT) domain NP805_02100 PF00132 Bacterial transferase hexapeptide (six repeats) NP805_02105 PF13036 Peptidoglycan-synthase activator LpoB NP805_02120 PF05598 Transposase domain (DUF772) NP805_02120 PF01609 Transposase DDE domain NP805_02130 PF06055 Exopolysaccharide synthesis, ExoD NP805_02140 PF08803 Putative mono-oxygenase ydhR NP805_02145 PF01638 HxlR-like helix-turn-helix NP805_02170 PF00593 TonB dependent receptor NP805_02170 PF07715 TonB-dependent Receptor Plug Domain NP805_02185 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NP805_02200 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase NP805_02205 PF02602 Uroporphyrinogen-III synthase HemD NP805_02210 PF03900 Porphobilinogen deaminase, C-terminal domain NP805_02210 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NP805_02215 PF12633 Adenylate cyclase NT domain NP805_02215 PF01295 Adenylate cyclase, class-I NP805_02220 PF02230 Phospholipase/Carboxylesterase NP805_02225 PF01491 Frataxin-like domain NP805_02235 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NP805_02235 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NP805_02240 PF01678 Diaminopimelate epimerase NP805_02250 PF02899 Phage integrase, N-terminal SAM-like domain NP805_02250 PF00589 Phage integrase family NP805_02255 PF13419 Haloacid dehalogenase-like hydrolase NP805_02265 PF00924 Mechanosensitive ion channel NP805_02275 PF07722 Peptidase C26 NP805_02295 PF00892 EamA-like transporter family NP805_02300 PF07690 Major Facilitator Superfamily NP805_02305 PF02909 Tetracyclin repressor-like, C-terminal domain NP805_02305 PF00440 Bacterial regulatory proteins, tetR family NP805_02315 PF01526 Tn3 transposase DDE domain NP805_02315 PF13700 Domain of unknown function (DUF4158) NP805_02320 PF02796 Helix-turn-helix domain of resolvase NP805_02320 PF00239 Resolvase, N terminal domain NP805_02325 PF13495 Phage integrase, N-terminal SAM-like domain NP805_02325 PF00589 Phage integrase family NP805_02330 PF06442 R67 dihydrofolate reductase NP805_02335 PF00132 Bacterial transferase hexapeptide (six repeats) NP805_02340 PF00893 Small Multidrug Resistance protein NP805_02345 PF00809 Pterin binding enzyme NP805_02370 PF01695 IstB-like ATP binding protein NP805_02375 PF00665 Integrase core domain NP805_02380 PF12729 Four helix bundle sensory module for signal transduction NP805_02380 PF00672 HAMP domain NP805_02380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_02395 PF01546 Peptidase family M20/M25/M40 NP805_02395 PF07687 Peptidase dimerisation domain NP805_02400 PF07670 Nucleoside recognition NP805_02405 PF07670 Nucleoside recognition NP805_02420 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase NP805_02425 PF01636 Phosphotransferase enzyme family NP805_02430 PF00239 Resolvase, N terminal domain NP805_02430 PF02796 Helix-turn-helix domain of resolvase NP805_02460 PF09828 Chromate resistance exported protein NP805_02490 PF02522 Aminoglycoside 3-N-acetyltransferase NP805_02500 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase NP805_02505 PF01636 Phosphotransferase enzyme family NP805_02510 PF01526 Tn3 transposase DDE domain NP805_02510 PF13700 Domain of unknown function (DUF4158) NP805_02525 PF07690 Major Facilitator Superfamily NP805_02530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_02530 PF03466 LysR substrate binding domain NP805_02540 PF01526 Tn3 transposase DDE domain NP805_02540 PF13700 Domain of unknown function (DUF4158) NP805_02545 PF00239 Resolvase, N terminal domain NP805_02545 PF02796 Helix-turn-helix domain of resolvase NP805_02550 PF00589 Phage integrase family NP805_02550 PF13495 Phage integrase, N-terminal SAM-like domain NP805_02560 PF00905 Penicillin binding protein transpeptidase domain NP805_02565 PF00132 Bacterial transferase hexapeptide (six repeats) NP805_02575 PF00893 Small Multidrug Resistance protein NP805_02580 PF00809 Pterin binding enzyme NP805_02595 PF03551 Transcriptional regulator PadR-like family NP805_02605 PF13610 DDE domain NP805_02620 PF01636 Phosphotransferase enzyme family NP805_02625 PF13610 DDE domain NP805_02645 PF00672 HAMP domain NP805_02645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_02675 PF00005 ABC transporter NP805_02685 PF02464 Competence-damaged protein NP805_02685 PF00994 Probable molybdopterin binding domain NP805_02695 PF04204 Homoserine O-succinyltransferase NP805_02705 PF01037 Lrp/AsnC ligand binding domain NP805_02710 PF00884 Sulfatase NP805_02725 PF02903 Alpha amylase, N-terminal ig-like domain NP805_02725 PF16657 Maltogenic Amylase, C-terminal domain NP805_02725 PF00128 Alpha amylase, catalytic domain NP805_02730 PF02308 MgtC family NP805_02750 PF00106 short chain dehydrogenase NP805_02755 PF03577 Peptidase family C69 NP805_02780 PF01053 Cys/Met metabolism PLP-dependent enzyme NP805_02790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP805_02790 PF12793 Sugar transport-related sRNA regulator N-term NP805_02795 PF00141 Peroxidase NP805_02815 PF00561 alpha/beta hydrolase fold NP805_02825 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NP805_02825 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NP805_02830 PF02698 DUF218 domain NP805_02835 PF08453 Peptidase family M9 N-terminal NP805_02835 PF01752 Collagenase NP805_02845 PF05598 Transposase domain (DUF772) NP805_02845 PF01609 Transposase DDE domain NP805_02850 PF00419 Fimbrial protein NP805_02855 PF00072 Response regulator receiver domain NP805_02855 PF00486 Transcriptional regulatory protein, C terminal NP805_02860 PF00501 AMP-binding enzyme NP805_02870 PF00378 Enoyl-CoA hydratase/isomerase NP805_02875 PF12697 Alpha/beta hydrolase family NP805_02880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NP805_02880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NP805_02880 PF16582 Middle domain of thiamine pyrophosphate NP805_02885 PF00425 chorismate binding enzyme NP805_02890 PF01040 UbiA prenyltransferase family NP805_02915 PF03880 DbpA RNA binding domain NP805_02915 PF00271 Helicase conserved C-terminal domain NP805_02915 PF00270 DEAD/DEAH box helicase NP805_02920 PF04307 LexA-binding, inner membrane-associated putative hydrolase NP805_02935 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NP805_02940 PF01544 CorA-like Mg2+ transporter protein NP805_02955 PF00226 DnaJ domain NP805_02955 PF01556 DnaJ C terminal domain NP805_02955 PF00684 DnaJ central domain NP805_02960 PF03471 Transporter associated domain NP805_02960 PF00999 Sodium/hydrogen exchanger family NP805_02960 PF02080 TrkA-C domain NP805_02965 PF05068 Mannitol repressor NP805_02970 PF01232 Mannitol dehydrogenase Rossmann domain NP805_02970 PF08125 Mannitol dehydrogenase C-terminal domain NP805_02975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NP805_02975 PF02378 Phosphotransferase system, EIIC NP805_02975 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NP805_02995 PF17876 Cold shock domain NP805_02995 PF08206 Ribonuclease B OB domain NP805_02995 PF00773 RNB domain NP805_03000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_03000 PF03466 LysR substrate binding domain NP805_03005 PF01609 Transposase DDE domain NP805_03005 PF13006 Insertion element 4 transposase N-terminal NP805_03015 PF00765 Autoinducer synthase NP805_03020 PF03472 Autoinducer binding domain NP805_03020 PF00196 Bacterial regulatory proteins, luxR family NP805_03025 PF01810 LysE type translocator NP805_03030 PF00149 Calcineurin-like phosphoesterase NP805_03030 PF02872 5'-nucleotidase, C-terminal domain NP805_03045 PF05433 Glycine zipper 2TM domain NP805_03050 PF00583 Acetyltransferase (GNAT) family NP805_03055 PF11756 Nitrous oxide-stimulated promoter NP805_03060 PF01321 Creatinase/Prolidase N-terminal domain NP805_03060 PF00557 Metallopeptidase family M24 NP805_03065 PF00392 Bacterial regulatory proteins, gntR family NP805_03070 PF01293 Phosphoenolpyruvate carboxykinase NP805_03075 PF01430 Hsp33 protein NP805_03080 PF01479 S4 domain NP805_03085 PF11356 Type II secretion system protein C NP805_03090 PF03958 Bacterial type II/III secretion system short domain NP805_03090 PF00263 Bacterial type II and III secretion system protein NP805_03095 PF00437 Type II/IV secretion system protein NP805_03100 PF00482 Type II secretion system (T2SS), protein F NP805_03105 PF08334 Type II secretion system (T2SS), protein G NP805_03105 PF07963 Prokaryotic N-terminal methylation motif NP805_03110 PF07963 Prokaryotic N-terminal methylation motif NP805_03110 PF12019 Type II transport protein GspH NP805_03115 PF02501 Type II secretion system (T2SS), protein I NP805_03115 PF07963 Prokaryotic N-terminal methylation motif NP805_03120 PF07963 Prokaryotic N-terminal methylation motif NP805_03120 PF11612 Type II secretion system (T2SS), protein J NP805_03140 PF03934 Type II secretion system (T2SS), protein K NP805_03145 PF12693 GspL periplasmic domain NP805_03145 PF05134 Type II secretion system (T2SS), protein L NP805_03150 PF04612 Type II secretion system (T2SS), protein M NP805_03155 PF01203 Type II secretion system (T2SS), protein N NP805_03160 PF00196 Bacterial regulatory proteins, luxR family NP805_03165 PF00579 tRNA synthetases class I (W and Y) NP805_03165 PF01479 S4 domain NP805_03170 PF13419 Haloacid dehalogenase-like hydrolase NP805_03175 PF00293 NUDIX domain NP805_03180 PF00459 Inositol monophosphatase family NP805_03185 PF03222 Tryptophan/tyrosine permease family NP805_03190 PF01588 Putative tRNA binding domain NP805_03195 PF12833 Helix-turn-helix domain NP805_03195 PF06445 GyrI-like small molecule binding domain NP805_03200 PF01340 Met Apo-repressor, MetJ NP805_03205 PF01053 Cys/Met metabolism PLP-dependent enzyme NP805_03210 PF00696 Amino acid kinase family NP805_03210 PF03447 Homoserine dehydrogenase, NAD binding domain NP805_03210 PF00742 Homoserine dehydrogenase NP805_03225 PF04172 LrgB-like family NP805_03230 PF03788 LrgA family NP805_03235 PF03466 LysR substrate binding domain NP805_03235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_03245 PF00392 Bacterial regulatory proteins, gntR family NP805_03245 PF00155 Aminotransferase class I and II NP805_03265 PF04073 Aminoacyl-tRNA editing domain NP805_03270 PF00582 Universal stress protein family NP805_03275 PF00916 Sulfate permease family NP805_03275 PF01740 STAS domain NP805_03280 PF02464 Competence-damaged protein NP805_03285 PF00154 recA bacterial DNA recombination protein NP805_03290 PF02631 RecX family NP805_03295 PF02272 DHHA1 domain NP805_03295 PF01411 tRNA synthetases class II (A) NP805_03295 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NP805_03300 PF13840 ACT domain NP805_03300 PF00696 Amino acid kinase family NP805_03300 PF01842 ACT domain NP805_03305 PF02599 Global regulator protein family NP805_03340 PF00768 D-alanyl-D-alanine carboxypeptidase NP805_03345 PF09335 SNARE associated Golgi protein NP805_03350 PF03471 Transporter associated domain NP805_03350 PF00571 CBS domain NP805_03350 PF01595 Cyclin M transmembrane N-terminal domain NP805_03355 PF10458 Valyl tRNA synthetase tRNA binding arm NP805_03355 PF00133 tRNA synthetases class I (I, L, M and V) NP805_03355 PF08264 Anticodon-binding domain of tRNA NP805_03365 PF02789 Cytosol aminopeptidase family, N-terminal domain NP805_03365 PF00883 Cytosol aminopeptidase family, catalytic domain NP805_03370 PF03739 Lipopolysaccharide export system permease LptF/LptG NP805_03375 PF03739 Lipopolysaccharide export system permease LptF/LptG NP805_03390 PF00589 Phage integrase family NP805_03390 PF13356 Arm DNA-binding domain NP805_03405 PF10548 P22AR C-terminal domain NP805_03405 PF08346 AntA/AntB antirepressor NP805_03460 PF05717 IS66 Orf2 like protein NP805_03465 PF13817 IS66 C-terminal element NP805_03465 PF13007 Transposase C of IS166 homeodomain NP805_03465 PF13005 zinc-finger binding domain of transposase IS66 NP805_03465 PF03050 Transposase IS66 family NP805_03475 PF00909 Ammonium Transporter Family NP805_03480 PF01938 TRAM domain NP805_03480 PF05958 tRNA (Uracil-5-)-methyltransferase NP805_03495 PF07963 Prokaryotic N-terminal methylation motif NP805_03500 PF01026 TatD related DNase NP805_03505 PF07670 Nucleoside recognition NP805_03505 PF01773 Na+ dependent nucleoside transporter N-terminus NP805_03505 PF07662 Na+ dependent nucleoside transporter C-terminus NP805_03515 PF01791 DeoC/LacD family aldolase NP805_03520 PF02885 Glycosyl transferase family, helical bundle domain NP805_03520 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NP805_03520 PF00591 Glycosyl transferase family, a/b domain NP805_03525 PF01676 Metalloenzyme superfamily NP805_03530 PF01048 Phosphorylase superfamily NP805_03540 PF18429 Domain of unknown function (DUF5609) NP805_03555 PF18073 Rubredoxin metal binding domain NP805_03560 PF07238 PilZ domain NP805_03565 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ NP805_03570 PF00216 Bacterial DNA-binding protein NP805_03585 PF01207 Dihydrouridine synthase (Dus) NP805_03590 PF01475 Ferric uptake regulator family NP805_03605 PF05525 Branched-chain amino acid transport protein NP805_03610 PF05175 Methyltransferase small domain NP805_03615 PF00271 Helicase conserved C-terminal domain NP805_03615 PF00270 DEAD/DEAH box helicase NP805_03620 PF03883 Peroxide stress protein YaaA NP805_03625 PF00437 Type II/IV secretion system protein NP805_03630 PF00437 Type II/IV secretion system protein NP805_03635 PF01168 Alanine racemase, N-terminal domain NP805_03640 PF14748 Pyrroline-5-carboxylate reductase dimerisation NP805_03640 PF03807 NADP oxidoreductase coenzyme F420-dependent NP805_03645 PF02325 YGGT family NP805_03650 PF02594 Uncharacterised ACR, YggU family COG1872 NP805_03665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP805_03675 PF00132 Bacterial transferase hexapeptide (six repeats) NP805_03680 PF10952 Protein of unknown function (DUF2753) NP805_03685 PF00378 Enoyl-CoA hydratase/isomerase NP805_03700 PF00106 short chain dehydrogenase NP805_03705 PF03466 LysR substrate binding domain NP805_03705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_03710 PF04371 Porphyromonas-type peptidyl-arginine deiminase NP805_03715 PF01425 Amidase NP805_03725 PF00753 Metallo-beta-lactamase superfamily NP805_03735 PF00271 Helicase conserved C-terminal domain NP805_03735 PF00270 DEAD/DEAH box helicase NP805_03740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_03740 PF03466 LysR substrate binding domain NP805_03755 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase NP805_03760 PF01609 Transposase DDE domain NP805_03760 PF13006 Insertion element 4 transposase N-terminal NP805_03780 PF00445 Ribonuclease T2 family NP805_03790 PF03060 Nitronate monooxygenase NP805_03820 PF00293 NUDIX domain NP805_03820 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NP805_03820 PF09297 NADH pyrophosphatase zinc ribbon domain NP805_03825 PF16527 Two-component sensor protein CpxA, periplasmic domain NP805_03825 PF00672 HAMP domain NP805_03825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_03825 PF00512 His Kinase A (phospho-acceptor) domain NP805_03830 PF00072 Response regulator receiver domain NP805_03830 PF00486 Transcriptional regulatory protein, C terminal NP805_03835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP805_03840 PF00005 ABC transporter NP805_03840 PF12704 MacB-like periplasmic core domain NP805_03840 PF02687 FtsX-like permease family NP805_03845 PF00326 Prolyl oligopeptidase family NP805_03845 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NP805_03850 PF05170 AsmA family NP805_03865 PF03710 Glutamate-ammonia ligase adenylyltransferase NP805_03865 PF08335 GlnD PII-uridylyltransferase NP805_03870 PF03608 PTS system enzyme II sorbitol-specific factor NP805_03880 PF13737 Transposase DDE domain NP805_03890 PF03829 PTS system glucitol/sorbitol-specific IIA component NP805_03895 PF00106 short chain dehydrogenase NP805_03905 PF08220 DeoR-like helix-turn-helix domain NP805_03905 PF00455 DeoR C terminal sensor domain NP805_03910 PF03710 Glutamate-ammonia ligase adenylyltransferase NP805_03910 PF08335 GlnD PII-uridylyltransferase NP805_03925 PF00293 NUDIX domain NP805_03930 PF00107 Zinc-binding dehydrogenase NP805_03930 PF16884 N-terminal domain of oxidoreductase NP805_03935 PF02566 OsmC-like protein NP805_03940 PF01047 MarR family NP805_03955 PF01037 Lrp/AsnC ligand binding domain NP805_03990 PF00209 Sodium:neurotransmitter symporter family NP805_04010 PF00209 Sodium:neurotransmitter symporter family NP805_04035 PF00392 Bacterial regulatory proteins, gntR family NP805_04035 PF00155 Aminotransferase class I and II NP805_04045 PF01810 LysE type translocator NP805_04050 PF01177 Asp/Glu/Hydantoin racemase NP805_04060 PF04074 YhcH/YjgK/YiaL NP805_04065 PF00871 Acetokinase family NP805_04070 PF00924 Mechanosensitive ion channel NP805_04075 PF03734 L,D-transpeptidase catalytic domain NP805_04075 PF17969 L,D-transpeptidase C-terminal domain NP805_04080 PF00474 Sodium:solute symporter family NP805_04090 PF13411 MerR HTH family regulatory protein NP805_04130 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NP805_04140 PF00005 ABC transporter NP805_04140 PF12848 ABC transporter NP805_04145 PF00571 CBS domain NP805_04145 PF01380 SIS domain NP805_04155 PF16200 C-terminal region of band_7 NP805_04155 PF01145 SPFH domain / Band 7 family NP805_04160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NP805_04160 PF10414 Sirohaem synthase dimerisation region NP805_04160 PF14824 Sirohaem biosynthesis protein central NP805_04165 PF01507 Phosphoadenosine phosphosulfate reductase family NP805_04170 PF00009 Elongation factor Tu GTP binding domain NP805_04175 PF03600 Citrate transporter NP805_04175 PF02080 TrkA-C domain NP805_04185 PF00313 'Cold-shock' DNA-binding domain NP805_04200 PF13808 DDE_Tnp_1-associated NP805_04200 PF01609 Transposase DDE domain NP805_04210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_04210 PF08447 PAS fold NP805_04230 PF00005 ABC transporter NP805_04245 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) NP805_04260 PF00480 ROK family NP805_04265 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NP805_04265 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NP805_04270 PF00162 Phosphoglycerate kinase NP805_04275 PF01116 Fructose-bisphosphate aldolase class-II NP805_04280 PF01266 FAD dependent oxidoreductase NP805_04295 PF02683 Cytochrome C biogenesis protein transmembrane region NP805_04295 PF11412 Disulphide bond corrector protein DsbC NP805_04300 PF03091 CutA1 divalent ion tolerance protein NP805_04315 PF03466 LysR substrate binding domain NP805_04315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_04320 PF01571 Aminomethyltransferase folate-binding domain NP805_04325 PF03937 Flavinator of succinate dehydrogenase NP805_04335 PF02910 Fumarate reductase flavoprotein C-term NP805_04335 PF00890 FAD binding domain NP805_04340 PF08281 Sigma-70, region 4 NP805_04340 PF04542 Sigma-70 region 2 NP805_04345 PF03872 Anti sigma-E protein RseA, N-terminal domain NP805_04345 PF03873 Anti sigma-E protein RseA, C-terminal domain NP805_04350 PF17188 MucB/RseB C-terminal domain NP805_04350 PF03888 MucB/RseB N-terminal domain NP805_04360 PF00679 Elongation factor G C-terminus NP805_04360 PF00009 Elongation factor Tu GTP binding domain NP805_04360 PF03144 Elongation factor Tu domain 2 NP805_04360 PF06421 GTP-binding protein LepA C-terminus NP805_04365 PF10502 Signal peptidase, peptidase S26 NP805_04370 PF00035 Double-stranded RNA binding motif NP805_04370 PF14622 Ribonuclease-III-like NP805_04375 PF07650 KH domain NP805_04375 PF01926 50S ribosome-binding GTPase NP805_04380 PF11967 Recombination protein O N terminal NP805_04380 PF02565 Recombination protein O C terminal NP805_04385 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NP805_04390 PF01510 N-acetylmuramoyl-L-alanine amidase NP805_04395 PF07308 Protein of unknown function (DUF1456) NP805_04400 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NP805_04400 PF00072 Response regulator receiver domain NP805_04400 PF00672 HAMP domain NP805_04400 PF00512 His Kinase A (phospho-acceptor) domain NP805_04400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_04400 PF01627 Hpt domain NP805_04405 PF01938 TRAM domain NP805_04405 PF05958 tRNA (Uracil-5-)-methyltransferase NP805_04410 PF04607 Region found in RelA / SpoT proteins NP805_04410 PF02824 TGS domain NP805_04410 PF13291 ACT domain NP805_04415 PF03819 MazG nucleotide pyrophosphohydrolase domain NP805_04420 PF06418 CTP synthase N-terminus NP805_04420 PF00117 Glutamine amidotransferase class-I NP805_04425 PF03952 Enolase, N-terminal domain NP805_04425 PF00113 Enolase, C-terminal TIM barrel domain NP805_04430 PF04977 Septum formation initiator NP805_04435 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NP805_04440 PF02542 YgbB family NP805_04445 PF01142 tRNA pseudouridine synthase D (TruD) NP805_04450 PF01975 Survival protein SurE NP805_04460 PF09335 SNARE associated Golgi protein NP805_04465 PF01476 LysM domain NP805_04465 PF01551 Peptidase family M23 NP805_04470 PF00140 Sigma-70 factor, region 1.2 NP805_04470 PF04542 Sigma-70 region 2 NP805_04470 PF04539 Sigma-70 region 3 NP805_04470 PF04545 Sigma-70, region 4 NP805_04475 PF00814 Glycoprotease family NP805_04480 PF01165 Ribosomal protein S21 NP805_04485 PF09424 Yqey-like protein NP805_04490 PF08275 DNA primase catalytic core, N-terminal domain NP805_04490 PF08278 DNA primase DnaG DnaB-binding NP805_04490 PF10410 DnaB-helicase binding domain of primase NP805_04490 PF01807 CHC2 zinc finger NP805_04495 PF04546 Sigma-70, non-essential region NP805_04495 PF03979 Sigma-70 factor, region 1.1 NP805_04495 PF00140 Sigma-70 factor, region 1.2 NP805_04495 PF04542 Sigma-70 region 2 NP805_04495 PF04539 Sigma-70 region 3 NP805_04495 PF04545 Sigma-70, region 4 NP805_04530 PF00589 Phage integrase family NP805_04530 PF13356 Arm DNA-binding domain NP805_04530 PF14659 Phage integrase, N-terminal SAM-like domain NP805_04550 PF00128 Alpha amylase, catalytic domain NP805_04565 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NP805_04565 PF02843 Phosphoribosylglycinamide synthetase, C domain NP805_04565 PF02844 Phosphoribosylglycinamide synthetase, N domain NP805_04570 PF02142 MGS-like domain NP805_04570 PF01808 AICARFT/IMPCHase bienzyme NP805_04575 PF13411 MerR HTH family regulatory protein NP805_04580 PF01872 RibD C-terminal domain NP805_04585 PF03889 Alternative ribosome-rescue factor A NP805_04590 PF04055 Radical SAM superfamily NP805_04590 PF06969 HemN C-terminal domain NP805_04595 PF01725 Ham1 family NP805_04600 PF07690 Major Facilitator Superfamily NP805_04605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NP805_04605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NP805_04620 PF13302 Acetyltransferase (GNAT) domain NP805_04625 PF13302 Acetyltransferase (GNAT) domain NP805_04630 PF07504 Fungalysin/Thermolysin Propeptide Motif NP805_04630 PF03413 Peptidase propeptide and YPEB domain NP805_04630 PF01447 Thermolysin metallopeptidase, catalytic domain NP805_04630 PF02868 Thermolysin metallopeptidase, alpha-helical domain NP805_04630 PF04151 Bacterial pre-peptidase C-terminal domain NP805_04635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_04635 PF03466 LysR substrate binding domain NP805_04640 PF07690 Major Facilitator Superfamily NP805_04645 PF00267 Gram-negative porin NP805_04650 PF03605 Anaerobic c4-dicarboxylate membrane transporter NP805_04655 PF00206 Lyase NP805_04655 PF10415 Fumarase C C-terminus NP805_04660 PF04186 FxsA cytoplasmic membrane protein NP805_04665 PF01554 MatE NP805_04670 PF00166 Chaperonin 10 Kd subunit NP805_04675 PF00118 TCP-1/cpn60 chaperonin family NP805_04685 PF03707 Bacterial signalling protein N terminal repeat NP805_04685 PF00563 EAL domain NP805_04685 PF00990 Diguanylate cyclase, GGDEF domain NP805_04695 PF00849 RNA pseudouridylate synthase NP805_04700 PF00271 Helicase conserved C-terminal domain NP805_04700 PF12137 RNA polymerase recycling family C-terminal NP805_04700 PF00176 SNF2 family N-terminal domain NP805_04700 PF18339 RapA N-terminal Tudor like domain 1 NP805_04700 PF18337 RapA N-terminal Tudor like domain NP805_04730 PF02867 Ribonucleotide reductase, barrel domain NP805_04730 PF00317 Ribonucleotide reductase, all-alpha domain NP805_04730 PF08343 Ribonucleotide reductase N-terminal NP805_04740 PF02562 PhoH-like protein NP805_04740 PF13638 PIN domain NP805_04745 PF00005 ABC transporter NP805_04750 PF00528 Binding-protein-dependent transport system inner membrane component NP805_04770 PF00694 Aconitase C-terminal domain NP805_04775 PF00330 Aconitase family (aconitate hydratase) NP805_04780 PF00180 Isocitrate/isopropylmalate dehydrogenase NP805_04785 PF08502 LeuA allosteric (dimerisation) domain NP805_04785 PF00682 HMGL-like NP805_04795 PF01569 PAP2 superfamily NP805_04810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NP805_04810 PF00205 Thiamine pyrophosphate enzyme, central domain NP805_04810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NP805_04815 PF10369 Small subunit of acetolactate synthase NP805_04820 PF07085 DRTGG domain NP805_04820 PF01515 Phosphate acetyl/butaryl transferase NP805_04825 PF00871 Acetokinase family NP805_04830 PF04217 Protein of unknown function, DUF412 NP805_04835 PF03887 YfbU domain NP805_04840 PF00578 AhpC/TSA family NP805_04845 PF01842 ACT domain NP805_04850 PF00701 Dihydrodipicolinate synthetase family NP805_04855 PF06804 NlpB/DapX lipoprotein NP805_04860 PF01259 SAICAR synthetase NP805_04870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_04870 PF03466 LysR substrate binding domain NP805_04895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_04895 PF00512 His Kinase A (phospho-acceptor) domain NP805_04895 PF18415 Histidine kinase receptor ArcB trans-membrane domain NP805_04895 PF01627 Hpt domain NP805_04895 PF00989 PAS fold NP805_04895 PF00072 Response regulator receiver domain NP805_04900 PF01966 HD domain NP805_04910 PF09456 RcsC Alpha-Beta-Loop (ABL) NP805_04910 PF00072 Response regulator receiver domain NP805_04910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_04910 PF00512 His Kinase A (phospho-acceptor) domain NP805_04915 PF00990 Diguanylate cyclase, GGDEF domain NP805_04915 PF03707 Bacterial signalling protein N terminal repeat NP805_04915 PF00563 EAL domain NP805_04920 PF12729 Four helix bundle sensory module for signal transduction NP805_04920 PF00672 HAMP domain NP805_04920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_04925 PF02357 Transcription termination factor nusG NP805_04930 PF03180 NLPA lipoprotein NP805_04935 PF00528 Binding-protein-dependent transport system inner membrane component NP805_04940 PF00005 ABC transporter NP805_04940 PF09383 NIL domain NP805_04950 PF00480 ROK family NP805_04955 PF08331 Domain of unknown function (DUF1730) NP805_04960 PF03853 YjeF-related protein N-terminus NP805_04960 PF01256 Carbohydrate kinase NP805_04965 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NP805_04970 PF01520 N-acetylmuramoyl-L-alanine amidase NP805_04975 PF01119 DNA mismatch repair protein, C-terminal domain NP805_04975 PF08676 MutL C terminal dimerisation domain NP805_04985 PF17209 Hfq protein NP805_04990 PF16360 GTP-binding GTPase Middle Region NP805_04990 PF13167 GTP-binding GTPase N-terminal NP805_04990 PF01926 50S ribosome-binding GTPase NP805_04995 PF01145 SPFH domain / Band 7 family NP805_04995 PF12221 Bacterial membrane protein N terminal NP805_05000 PF01145 SPFH domain / Band 7 family NP805_05005 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) NP805_05010 PF00348 Polyprenyl synthetase NP805_05015 PF00829 Ribosomal prokaryotic L21 protein NP805_05020 PF01016 Ribosomal L27 protein NP805_05025 PF01018 GTP1/OBG NP805_05025 PF01926 50S ribosome-binding GTPase NP805_05030 PF07670 Nucleoside recognition NP805_05035 PF00501 AMP-binding enzyme NP805_05035 PF13193 AMP-binding enzyme C-terminal domain NP805_05065 PF00296 Luciferase-like monooxygenase NP805_05085 PF00149 Calcineurin-like phosphoesterase NP805_05090 PF04379 ApaG domain NP805_05095 PF00398 Ribosomal RNA adenine dimethylase NP805_05100 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NP805_05105 PF09312 SurA N-terminal domain NP805_05105 PF00639 PPIC-type PPIASE domain NP805_05110 PF03968 OstA-like protein NP805_05110 PF04453 LPS transport system D NP805_05115 PF01636 Phosphotransferase enzyme family NP805_05120 PF00483 Nucleotidyl transferase NP805_05125 PF00226 DnaJ domain NP805_05125 PF05099 Tellurite resistance protein TerB NP805_05130 PF00860 Permease family NP805_05140 PF00005 ABC transporter NP805_05140 PF12848 ABC transporter NP805_05145 PF01464 Transglycosylase SLT domain NP805_05150 PF01370 NAD dependent epimerase/dehydratase family NP805_05160 PF00005 ABC transporter NP805_05165 PF01032 FecCD transport family NP805_05175 PF06228 Haem utilisation ChuX/HutX NP805_05180 PF01243 Pyridoxamine 5'-phosphate oxidase NP805_05185 PF13358 DDE superfamily endonuclease NP805_05185 PF13592 Winged helix-turn helix NP805_05205 PF00593 TonB dependent receptor NP805_05205 PF07715 TonB-dependent Receptor Plug Domain NP805_05210 PF12832 MFS_1 like family NP805_05220 PF13443 Cro/C1-type HTH DNA-binding domain NP805_05230 PF00512 His Kinase A (phospho-acceptor) domain NP805_05230 PF00989 PAS fold NP805_05230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_05235 PF08329 Chitinase A, N-terminal domain NP805_05235 PF00704 Glycosyl hydrolases family 18 NP805_05240 PF17945 Beta/Gamma crystallin NP805_05240 PF12561 ToxR activated gene A lipoprotein domain NP805_05245 PF18416 N-acetylglucosamine binding protein domain 2 NP805_05245 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NP805_05250 PF01609 Transposase DDE domain NP805_05250 PF13006 Insertion element 4 transposase N-terminal NP805_05255 PF13847 Methyltransferase domain NP805_05260 PF13545 Crp-like helix-turn-helix domain NP805_05260 PF00027 Cyclic nucleotide-binding domain NP805_05265 PF02566 OsmC-like protein NP805_05280 PF00485 Phosphoribulokinase / Uridine kinase family NP805_05290 PF06794 Uncharacterised protein family (UPF0270) NP805_05295 PF00360 Phytochrome region NP805_05295 PF00563 EAL domain NP805_05295 PF01590 GAF domain NP805_05295 PF00990 Diguanylate cyclase, GGDEF domain NP805_05300 PF00561 alpha/beta hydrolase fold NP805_05305 PF01584 CheW-like domain NP805_05305 PF00072 Response regulator receiver domain NP805_05315 PF09526 Probable metal-binding protein (DUF2387) NP805_05320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP805_05325 PF04102 SlyX NP805_05335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP805_05335 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NP805_05340 PF02954 Bacterial regulatory protein, Fis family NP805_05340 PF00072 Response regulator receiver domain NP805_05340 PF00158 Sigma-54 interaction domain NP805_05360 PF02872 5'-nucleotidase, C-terminal domain NP805_05360 PF00149 Calcineurin-like phosphoesterase NP805_05365 PF12792 CSS motif domain associated with EAL NP805_05365 PF00563 EAL domain NP805_05375 PF03796 DnaB-like helicase C terminal domain NP805_05375 PF00772 DnaB-like helicase N terminal domain NP805_05380 PF01168 Alanine racemase, N-terminal domain NP805_05380 PF00842 Alanine racemase, C-terminal domain NP805_05385 PF12838 4Fe-4S dicluster domain NP805_05390 PF01136 Peptidase family U32 NP805_05390 PF16325 Peptidase family U32 C-terminal domain NP805_05400 PF11799 impB/mucB/samB family C-terminal domain NP805_05400 PF13438 Domain of unknown function (DUF4113) NP805_05400 PF00817 impB/mucB/samB family NP805_05400 PF11798 IMS family HHH motif NP805_05405 PF00717 Peptidase S24-like NP805_05410 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NP805_05415 PF01609 Transposase DDE domain NP805_05415 PF05598 Transposase domain (DUF772) NP805_05430 PF13737 Transposase DDE domain NP805_05440 PF01609 Transposase DDE domain NP805_05440 PF05598 Transposase domain (DUF772) NP805_05445 PF00072 Response regulator receiver domain NP805_05445 PF00196 Bacterial regulatory proteins, luxR family NP805_05450 PF00672 HAMP domain NP805_05450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_05450 PF00512 His Kinase A (phospho-acceptor) domain NP805_05450 PF01627 Hpt domain NP805_05450 PF00072 Response regulator receiver domain NP805_05450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NP805_05475 PF00266 Aminotransferase class-V NP805_05480 PF01339 CheB methylesterase NP805_05480 PF00072 Response regulator receiver domain NP805_05485 PF03975 CheD chemotactic sensory transduction NP805_05505 PF00072 Response regulator receiver domain NP805_05510 PF00672 HAMP domain NP805_05510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_05510 PF02743 Cache domain NP805_05515 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NP805_05515 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NP805_05520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_05520 PF03466 LysR substrate binding domain NP805_05525 PF01810 LysE type translocator NP805_05530 PF12392 Collagenase NP805_05530 PF01136 Peptidase family U32 NP805_05550 PF06906 Protein of unknown function (DUF1272) NP805_05555 PF01209 ubiE/COQ5 methyltransferase family NP805_05560 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NP805_05560 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NP805_05565 PF02805 Metal binding domain of Ada NP805_05565 PF06029 AlkA N-terminal domain NP805_05565 PF12833 Helix-turn-helix domain NP805_05565 PF00730 HhH-GPD superfamily base excision DNA repair protein NP805_05575 PF02074 Carboxypeptidase Taq (M32) metallopeptidase NP805_05600 PF00106 short chain dehydrogenase NP805_05605 PF03573 outer membrane porin, OprD family NP805_05610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_05620 PF02447 GntP family permease NP805_05625 PF01370 NAD dependent epimerase/dehydratase family NP805_05630 PF01261 Xylose isomerase-like TIM barrel NP805_05635 PF00596 Class II Aldolase and Adducin N-terminal domain NP805_05640 PF17042 Nucleotide-binding C-terminal domain NP805_05640 PF07005 Sugar-binding N-terminal domain NP805_05645 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NP805_05645 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NP805_05650 PF08220 DeoR-like helix-turn-helix domain NP805_05650 PF00455 DeoR C terminal sensor domain NP805_05665 PF13737 Transposase DDE domain NP805_05700 PF01817 Chorismate mutase type II NP805_05700 PF00800 Prephenate dehydratase NP805_05730 PF08349 Protein of unknown function (DUF1722) NP805_05735 PF13411 MerR HTH family regulatory protein NP805_05740 PF00875 DNA photolyase NP805_05740 PF03441 FAD binding domain of DNA photolyase NP805_05750 PF00106 short chain dehydrogenase NP805_05790 PF00210 Ferritin-like domain NP805_05795 PF03063 Prismane/CO dehydrogenase family NP805_05800 PF00970 Oxidoreductase FAD-binding domain NP805_05800 PF00111 2Fe-2S iron-sulfur cluster binding domain NP805_05800 PF00175 Oxidoreductase NAD-binding domain NP805_05805 PF16363 GDP-mannose 4,6 dehydratase NP805_05810 PF06965 Na+/H+ antiporter 1 NP805_05810 PF13462 Thioredoxin NP805_05820 PF00176 SNF2 family N-terminal domain NP805_05820 PF00271 Helicase conserved C-terminal domain NP805_05900 PF04002 RadC-like JAB domain NP805_05940 PF05598 Transposase domain (DUF772) NP805_05940 PF01609 Transposase DDE domain NP805_05955 PF13148 Protein of unknown function (DUF3987) NP805_05965 PF00816 H-NS histone family NP805_05985 PF03459 TOBE domain NP805_05985 PF00005 ABC transporter NP805_05990 PF00589 Phage integrase family NP805_05990 PF13356 Arm DNA-binding domain NP805_05995 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain NP805_05995 PF06165 Glycosyltransferase family 36 NP805_05995 PF10091 Putative glucoamylase NP805_06000 PF03466 LysR substrate binding domain NP805_06000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_06005 PF03306 Alpha-acetolactate decarboxylase NP805_06010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NP805_06010 PF00205 Thiamine pyrophosphate enzyme, central domain NP805_06010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NP805_06015 PF01965 DJ-1/PfpI family NP805_06020 PF02558 Ketopantoate reductase PanE/ApbA NP805_06020 PF08546 Ketopantoate reductase PanE/ApbA C terminal NP805_06025 PF04461 Protein of unknown function (DUF520) NP805_06030 PF03502 Nucleoside-specific channel-forming protein, Tsx NP805_06035 PF07690 Major Facilitator Superfamily NP805_06045 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NP805_06055 PF05175 Methyltransferase small domain NP805_06060 PF01722 BolA-like protein NP805_06070 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) NP805_06070 PF11973 NQRA C-terminal domain NP805_06075 PF03116 NQR2, RnfD, RnfE family NP805_06080 PF04205 FMN-binding domain NP805_06085 PF02508 Rnf-Nqr subunit, membrane protein NP805_06090 PF02508 Rnf-Nqr subunit, membrane protein NP805_06095 PF00970 Oxidoreductase FAD-binding domain NP805_06095 PF00111 2Fe-2S iron-sulfur cluster binding domain NP805_06095 PF00175 Oxidoreductase NAD-binding domain NP805_06100 PF02424 ApbE family NP805_06115 PF00817 impB/mucB/samB family NP805_06115 PF11798 IMS family HHH motif NP805_06115 PF11799 impB/mucB/samB family C-terminal domain NP805_06120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_06120 PF00672 HAMP domain NP805_06125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_06125 PF03466 LysR substrate binding domain NP805_06135 PF04241 Protein of unknown function (DUF423) NP805_06140 PF01728 FtsJ-like methyltransferase NP805_06140 PF18125 RlmM ferredoxin-like domain NP805_06150 PF00180 Isocitrate/isopropylmalate dehydrogenase NP805_06150 PF18324 Hypothetical protein TT1725 NP805_06155 PF01367 5'-3' exonuclease, C-terminal SAM fold NP805_06155 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NP805_06160 PF03641 Possible lysine decarboxylase NP805_06160 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NP805_06160 PF11892 Domain of unknown function (DUF3412) NP805_06165 PF00990 Diguanylate cyclase, GGDEF domain NP805_06175 PF14489 QueF-like protein NP805_06175 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NP805_06180 PF07348 Syd protein (SUKH-2) NP805_06185 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) NP805_06210 PF04287 tRNA pseudouridine synthase C NP805_06215 PF00849 RNA pseudouridylate synthase NP805_06220 PF00258 Flavodoxin NP805_06225 PF02264 LamB porin NP805_06230 PF07148 Maltose operon periplasmic protein precursor (MalM) NP805_06235 PF13808 DDE_Tnp_1-associated NP805_06235 PF01609 Transposase DDE domain NP805_06240 PF00367 phosphotransferase system, EIIB NP805_06240 PF02378 Phosphotransferase system, EIIC NP805_06245 PF11944 Protein of unknown function (DUF3461) NP805_06250 PF14602 Hexapeptide repeat of succinyl-transferase NP805_06250 PF00132 Bacterial transferase hexapeptide (six repeats) NP805_06250 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NP805_06255 PF01842 ACT domain NP805_06255 PF08335 GlnD PII-uridylyltransferase NP805_06255 PF01966 HD domain NP805_06255 PF01909 Nucleotidyltransferase domain NP805_06260 PF00557 Metallopeptidase family M24 NP805_06265 PF00318 Ribosomal protein S2 NP805_06270 PF00889 Elongation factor TS NP805_06275 PF00696 Amino acid kinase family NP805_06280 PF01765 Ribosome recycling factor NP805_06285 PF01255 Putative undecaprenyl diphosphate synthase NP805_06295 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NP805_06295 PF13288 DXP reductoisomerase C-terminal domain NP805_06295 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NP805_06300 PF17820 PDZ domain NP805_06300 PF02163 Peptidase family M50 NP805_06305 PF01103 Surface antigen NP805_06305 PF07244 Surface antigen variable number repeat NP805_06310 PF03938 Outer membrane protein (OmpH-like) NP805_06315 PF00132 Bacterial transferase hexapeptide (six repeats) NP805_06315 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NP805_06320 PF07977 FabA-like domain NP805_06325 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NP805_06325 PF00132 Bacterial transferase hexapeptide (six repeats) NP805_06330 PF02684 Lipid-A-disaccharide synthetase NP805_06335 PF01351 Ribonuclease HII NP805_06340 PF01336 OB-fold nucleic acid binding domain NP805_06340 PF02811 PHP domain NP805_06340 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NP805_06340 PF14579 Helix-hairpin-helix motif NP805_06340 PF07733 Bacterial DNA polymerase III alpha NTPase domain NP805_06345 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NP805_06350 PF18500 CadC C-terminal domain 1 NP805_06350 PF00486 Transcriptional regulatory protein, C terminal NP805_06355 PF13520 Amino acid permease NP805_06360 PF01276 Orn/Lys/Arg decarboxylase, major domain NP805_06360 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NP805_06360 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain NP805_06365 PF08543 Phosphomethylpyrimidine kinase NP805_06375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_06375 PF03466 LysR substrate binding domain NP805_06385 PF13520 Amino acid permease NP805_06390 PF13302 Acetyltransferase (GNAT) domain NP805_06395 PF16326 ABC transporter C-terminal domain NP805_06395 PF00005 ABC transporter NP805_06395 PF12848 ABC transporter NP805_06400 PF01609 Transposase DDE domain NP805_06400 PF13006 Insertion element 4 transposase N-terminal NP805_06410 PF01431 Peptidase family M13 NP805_06410 PF05649 Peptidase family M13 NP805_06415 PF01171 PP-loop family NP805_06415 PF09179 TilS substrate binding domain NP805_06415 PF11734 TilS substrate C-terminal domain NP805_06420 PF00990 Diguanylate cyclase, GGDEF domain NP805_06470 PF00196 Bacterial regulatory proteins, luxR family NP805_06470 PF00072 Response regulator receiver domain NP805_06480 PF00128 Alpha amylase, catalytic domain NP805_06490 PF01161 Phosphatidylethanolamine-binding protein NP805_06495 PF00709 Adenylosuccinate synthetase NP805_06500 PF03466 LysR substrate binding domain NP805_06500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_06510 PF00155 Aminotransferase class I and II NP805_06515 PF07690 Major Facilitator Superfamily NP805_06520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_06520 PF03466 LysR substrate binding domain NP805_06525 PF00106 short chain dehydrogenase NP805_06530 PF01343 Peptidase family S49 NP805_06530 PF08496 Peptidase family S49 N-terminal NP805_06535 PF04996 Succinylarginine dihydrolase NP805_06540 PF08272 Topoisomerase I zinc-ribbon-like NP805_06540 PF01131 DNA topoisomerase NP805_06540 PF01751 Toprim domain NP805_06540 PF01396 Topoisomerase DNA binding C4 zinc finger NP805_06555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_06555 PF08447 PAS fold NP805_06560 PF02838 Glycosyl hydrolase family 20, domain 2 NP805_06560 PF00728 Glycosyl hydrolase family 20, catalytic domain NP805_06565 PF01869 BadF/BadG/BcrA/BcrD ATPase family NP805_06575 PF00005 ABC transporter NP805_06575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP805_06580 PF00005 ABC transporter NP805_06580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP805_06585 PF00528 Binding-protein-dependent transport system inner membrane component NP805_06585 PF12911 N-terminal TM domain of oligopeptide transport permease C NP805_06590 PF00528 Binding-protein-dependent transport system inner membrane component NP805_06595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP805_06600 PF00512 His Kinase A (phospho-acceptor) domain NP805_06600 PF00072 Response regulator receiver domain NP805_06600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_06600 PF09308 LuxQ, periplasmic NP805_06625 PF10725 Protein of unknown function (DUF2517) NP805_06635 PF08447 PAS fold NP805_06635 PF13426 PAS domain NP805_06635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_06645 PF04632 Fusaric acid resistance protein family NP805_06650 PF00994 Probable molybdopterin binding domain NP805_06650 PF03454 MoeA C-terminal region (domain IV) NP805_06650 PF03453 MoeA N-terminal region (domain I and II) NP805_06655 PF12804 MobA-like NTP transferase domain NP805_06660 PF00005 ABC transporter NP805_06665 PF00528 Binding-protein-dependent transport system inner membrane component NP805_06670 PF12849 PBP superfamily domain NP805_06675 PF02954 Bacterial regulatory protein, Fis family NP805_06675 PF00072 Response regulator receiver domain NP805_06675 PF00158 Sigma-54 interaction domain NP805_06680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_06680 PF00512 His Kinase A (phospho-acceptor) domain NP805_06680 PF00989 PAS fold NP805_06690 PF02634 FdhD/NarQ family NP805_06730 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NP805_06730 PF01568 Molydopterin dinucleotide binding domain NP805_06730 PF00384 Molybdopterin oxidoreductase NP805_06730 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NP805_06730 PF12838 4Fe-4S dicluster domain NP805_06735 PF13247 4Fe-4S dicluster domain NP805_06750 PF00390 Malic enzyme, N-terminal domain NP805_06750 PF03949 Malic enzyme, NAD binding domain NP805_06755 PF00860 Permease family NP805_06760 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP805_06765 PF12729 Four helix bundle sensory module for signal transduction NP805_06765 PF00672 HAMP domain NP805_06765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_06775 PF10282 Lactonase, 7-bladed beta-propeller NP805_06780 PF12794 Mechanosensitive ion channel inner membrane domain 1 NP805_06780 PF12795 Mechanosensitive ion channel porin domain NP805_06780 PF00924 Mechanosensitive ion channel NP805_06785 PF00224 Pyruvate kinase, barrel domain NP805_06785 PF02887 Pyruvate kinase, alpha/beta domain NP805_06795 PF04389 Peptidase family M28 NP805_06795 PF04151 Bacterial pre-peptidase C-terminal domain NP805_06800 PF00999 Sodium/hydrogen exchanger family NP805_06800 PF02254 TrkA-N domain NP805_06810 PF04381 Putative exonuclease, RdgC NP805_06820 PF00149 Calcineurin-like phosphoesterase NP805_06820 PF12320 Type 5 capsule protein repressor C-terminal domain NP805_06825 PF13476 AAA domain NP805_06835 PF01292 Prokaryotic cytochrome b561 NP805_06845 PF08448 PAS fold NP805_06845 PF00990 Diguanylate cyclase, GGDEF domain NP805_06850 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NP805_06855 PF00391 PEP-utilising enzyme, mobile domain NP805_06855 PF05524 PEP-utilising enzyme, N-terminal NP805_06855 PF02896 PEP-utilising enzyme, TIM barrel domain NP805_06860 PF00381 PTS HPr component phosphorylation site NP805_06865 PF00291 Pyridoxal-phosphate dependent enzyme NP805_06880 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NP805_06880 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NP805_06885 PF01980 tRNA-methyltransferase O NP805_06885 PF18389 TrmO C-terminal domain NP805_06905 PF00664 ABC transporter transmembrane region NP805_06905 PF00005 ABC transporter NP805_06910 PF00664 ABC transporter transmembrane region NP805_06910 PF00005 ABC transporter NP805_06930 PF00072 Response regulator receiver domain NP805_06930 PF00486 Transcriptional regulatory protein, C terminal NP805_06940 PF03737 Aldolase/RraA NP805_06955 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) NP805_06960 PF00588 SpoU rRNA Methylase family NP805_06965 PF00696 Amino acid kinase family NP805_06965 PF01842 ACT domain NP805_06965 PF13840 ACT domain NP805_06965 PF00742 Homoserine dehydrogenase NP805_06965 PF03447 Homoserine dehydrogenase, NAD binding domain NP805_06970 PF08544 GHMP kinases C terminal NP805_06970 PF00288 GHMP kinases N terminal domain NP805_06975 PF00291 Pyridoxal-phosphate dependent enzyme NP805_06975 PF14821 Threonine synthase N terminus NP805_06980 PF01609 Transposase DDE domain NP805_06980 PF05598 Transposase domain (DUF772) NP805_07000 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NP805_07005 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NP805_07005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP805_07010 PF02690 Na+/Pi-cotransporter NP805_07015 PF00324 Amino acid permease NP805_07020 PF00324 Amino acid permease NP805_07025 PF00202 Aminotransferase class-III NP805_07030 PF00171 Aldehyde dehydrogenase family NP805_07035 PF01381 Helix-turn-helix NP805_07035 PF07883 Cupin domain NP805_07040 PF01266 FAD dependent oxidoreductase NP805_07075 PF01609 Transposase DDE domain NP805_07075 PF13808 DDE_Tnp_1-associated NP805_07085 PF00816 H-NS histone family NP805_07090 PF13808 DDE_Tnp_1-associated NP805_07090 PF01609 Transposase DDE domain NP805_07095 PF00793 DAHP synthetase I family NP805_07100 PF08021 Siderophore-interacting FAD-binding domain NP805_07100 PF04954 Siderophore-interacting protein NP805_07105 PF02321 Outer membrane efflux protein NP805_07110 PF02687 FtsX-like permease family NP805_07110 PF12704 MacB-like periplasmic core domain NP805_07110 PF00005 ABC transporter NP805_07115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP805_07125 PF01368 DHH family NP805_07125 PF02833 DHHA2 domain NP805_07135 PF02463 RecF/RecN/SMC N terminal domain NP805_07140 PF01513 ATP-NAD kinase NP805_07145 PF01025 GrpE NP805_07150 PF00012 Hsp70 protein NP805_07155 PF00226 DnaJ domain NP805_07155 PF01556 DnaJ C terminal domain NP805_07155 PF00684 DnaJ central domain NP805_07160 PF11471 Maltoporin periplasmic N-terminal extension NP805_07160 PF02264 LamB porin NP805_07165 PF00294 pfkB family carbohydrate kinase NP805_07170 PF00367 phosphotransferase system, EIIB NP805_07170 PF02378 Phosphotransferase system, EIIC NP805_07175 PF00251 Glycosyl hydrolases family 32 N-terminal domain NP805_07175 PF08244 Glycosyl hydrolases family 32 C terminal NP805_07180 PF00356 Bacterial regulatory proteins, lacI family NP805_07180 PF13407 Periplasmic binding protein domain NP805_07185 PF02308 MgtC family NP805_07205 PF04143 Sulphur transport NP805_07220 PF00873 AcrB/AcrD/AcrF family NP805_07225 PF00990 Diguanylate cyclase, GGDEF domain NP805_07225 PF03707 Bacterial signalling protein N terminal repeat NP805_07225 PF00563 EAL domain NP805_07230 PF10437 Bacterial lipoate protein ligase C-terminus NP805_07230 PF03099 Biotin/lipoate A/B protein ligase family NP805_07240 PF00873 AcrB/AcrD/AcrF family NP805_07245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP805_07245 PF00529 HlyD membrane-fusion protein of T1SS NP805_07260 PF00873 AcrB/AcrD/AcrF family NP805_07265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP805_07270 PF03372 Endonuclease/Exonuclease/phosphatase family NP805_07285 PF02424 ApbE family NP805_07290 PF00127 Copper binding proteins, plastocyanin/azurin family NP805_07305 PF01156 Inosine-uridine preferring nucleoside hydrolase NP805_07315 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NP805_07315 PF00034 Cytochrome c NP805_07325 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NP805_07325 PF06481 COX Aromatic Rich Motif NP805_07330 PF00115 Cytochrome C and Quinol oxidase polypeptide I NP805_07335 PF00510 Cytochrome c oxidase subunit III NP805_07340 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NP805_07345 PF01040 UbiA prenyltransferase family NP805_07350 PF07690 Major Facilitator Superfamily NP805_07380 PF01238 Phosphomannose isomerase type I NP805_07385 PF12833 Helix-turn-helix domain NP805_07390 PF00180 Isocitrate/isopropylmalate dehydrogenase NP805_07400 PF00291 Pyridoxal-phosphate dependent enzyme NP805_07405 PF02447 GntP family permease NP805_07410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_07410 PF03466 LysR substrate binding domain NP805_07430 PF01695 IstB-like ATP binding protein NP805_07435 PF00665 Integrase core domain NP805_07455 PF13737 Transposase DDE domain NP805_07460 PF01609 Transposase DDE domain NP805_07460 PF05598 Transposase domain (DUF772) NP805_07470 PF05598 Transposase domain (DUF772) NP805_07470 PF01609 Transposase DDE domain NP805_07480 PF01609 Transposase DDE domain NP805_07480 PF13808 DDE_Tnp_1-associated NP805_07495 PF02146 Sir2 family NP805_07505 PF13737 Transposase DDE domain NP805_07515 PF13438 Domain of unknown function (DUF4113) NP805_07515 PF00817 impB/mucB/samB family NP805_07515 PF11799 impB/mucB/samB family C-terminal domain NP805_07515 PF11798 IMS family HHH motif NP805_07520 PF00717 Peptidase S24-like NP805_07525 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NP805_07535 PF00580 UvrD/REP helicase N-terminal domain NP805_07535 PF13361 UvrD-like helicase C-terminal domain NP805_07560 PF02661 Fic/DOC family NP805_07570 PF09722 Protein of unknown function (DUF2384) NP805_07575 PF00589 Phage integrase family NP805_07575 PF13356 Arm DNA-binding domain NP805_07585 PF01668 SmpB protein NP805_07595 PF03364 Polyketide cyclase / dehydrase and lipid transport NP805_07600 PF03658 RnfH family Ubiquitin NP805_07605 PF13460 NAD(P)H-binding NP805_07610 PF04355 SmpA / OmlA family NP805_07640 PF13629 Pilus formation protein N terminal region NP805_07640 PF04972 BON domain NP805_07640 PF00263 Bacterial type II and III secretion system protein NP805_07650 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NP805_07655 PF00437 Type II/IV secretion system protein NP805_07690 PF00465 Iron-containing alcohol dehydrogenase NP805_07695 PF01048 Phosphorylase superfamily NP805_07700 PF00849 RNA pseudouridylate synthase NP805_07705 PF01156 Inosine-uridine preferring nucleoside hydrolase NP805_07720 PF07509 Protein of unknown function (DUF1523) NP805_07725 PF12729 Four helix bundle sensory module for signal transduction NP805_07725 PF00672 HAMP domain NP805_07725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_07730 PF01810 LysE type translocator NP805_07740 PF00999 Sodium/hydrogen exchanger family NP805_07740 PF02080 TrkA-C domain NP805_07740 PF03471 Transporter associated domain NP805_07750 PF00999 Sodium/hydrogen exchanger family NP805_07750 PF03471 Transporter associated domain NP805_07750 PF02080 TrkA-C domain NP805_07760 PF02557 D-alanyl-D-alanine carboxypeptidase NP805_07765 PF07687 Peptidase dimerisation domain NP805_07765 PF01546 Peptidase family M20/M25/M40 NP805_07770 PF03960 ArsC family NP805_07775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_07775 PF03466 LysR substrate binding domain NP805_07790 PF03605 Anaerobic c4-dicarboxylate membrane transporter NP805_07795 PF01336 OB-fold nucleic acid binding domain NP805_07795 PF00152 tRNA synthetases class II (D, K and N) NP805_07810 PF00202 Aminotransferase class-III NP805_07815 PF06968 Biotin and Thiamin Synthesis associated domain NP805_07815 PF04055 Radical SAM superfamily NP805_07820 PF00155 Aminotransferase class I and II NP805_07825 PF12697 Alpha/beta hydrolase family NP805_07825 PF08241 Methyltransferase domain NP805_07835 PF01435 Peptidase family M48 NP805_07840 PF13426 PAS domain NP805_07840 PF08447 PAS fold NP805_07840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_07845 PF03476 MOSC N-terminal beta barrel domain NP805_07845 PF03473 MOSC domain NP805_07845 PF00111 2Fe-2S iron-sulfur cluster binding domain NP805_07845 PF03473 MOSC domain NP805_07845 PF00111 2Fe-2S iron-sulfur cluster binding domain NP805_07845 PF03476 MOSC N-terminal beta barrel domain NP805_07850 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NP805_07850 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NP805_07850 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP805_07855 PF10371 Domain of unknown function NP805_07855 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NP805_07855 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NP805_07855 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NP805_07855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NP805_07865 PF04325 Protein of unknown function (DUF465) NP805_07875 PF01554 MatE NP805_07880 PF01740 STAS domain NP805_07880 PF00916 Sulfate permease family NP805_07895 PF00291 Pyridoxal-phosphate dependent enzyme NP805_07905 PF00465 Iron-containing alcohol dehydrogenase NP805_07915 PF08359 YsiA-like protein, C-terminal region NP805_07915 PF00440 Bacterial regulatory proteins, tetR family NP805_07920 PF00171 Aldehyde dehydrogenase family NP805_07930 PF00877 NlpC/P60 family NP805_07935 PF12563 Hemolytic toxin N terminal NP805_07935 PF07968 Leukocidin/Hemolysin toxin family NP805_07940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_07940 PF03466 LysR substrate binding domain NP805_07945 PF10417 C-terminal domain of 1-Cys peroxiredoxin NP805_07945 PF00578 AhpC/TSA family NP805_07965 PF08003 Protein of unknown function (DUF1698) NP805_07970 PF13649 Methyltransferase domain NP805_07975 PF01904 Protein of unknown function DUF72 NP805_07980 PF01336 OB-fold nucleic acid binding domain NP805_07980 PF02938 GAD domain NP805_07980 PF00152 tRNA synthetases class II (D, K and N) NP805_07985 PF01709 Transcriptional regulator NP805_07990 PF08019 Phosphoethanolamine transferase EptA/EptB NP805_07990 PF00884 Sulfatase NP805_07995 PF00480 ROK family NP805_07995 PF01047 MarR family NP805_08000 PF01979 Amidohydrolase family NP805_08005 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NP805_08010 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NP805_08010 PF00367 phosphotransferase system, EIIB NP805_08010 PF02378 Phosphotransferase system, EIIC NP805_08015 PF03173 Putative carbohydrate binding domain NP805_08015 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain NP805_08015 PF00728 Glycosyl hydrolase family 20, catalytic domain NP805_08015 PF02838 Glycosyl hydrolase family 20, domain 2 NP805_08020 PF00749 tRNA synthetases class I (E and Q), catalytic domain NP805_08020 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NP805_08025 PF01475 Ferric uptake regulator family NP805_08035 PF00258 Flavodoxin NP805_08040 PF01402 Ribbon-helix-helix protein, copG family NP805_08050 PF12697 Alpha/beta hydrolase family NP805_08055 PF17206 SeqA protein N-terminal domain NP805_08055 PF03925 SeqA protein C-terminal domain NP805_08060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NP805_08060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NP805_08060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NP805_08060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NP805_08070 PF01047 MarR family NP805_08075 PF13406 Transglycosylase SLT domain NP805_08080 PF01066 CDP-alcohol phosphatidyltransferase NP805_08085 PF00005 ABC transporter NP805_08090 PF00528 Binding-protein-dependent transport system inner membrane component NP805_08095 PF13416 Bacterial extracellular solute-binding protein NP805_08100 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP805_08100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NP805_08100 PF00403 Heavy-metal-associated domain NP805_08105 PF02627 Carboxymuconolactone decarboxylase family NP805_08115 PF01625 Peptide methionine sulfoxide reductase NP805_08135 PF17243 POTRA domain TamA domain 1 NP805_08135 PF07244 Surface antigen variable number repeat NP805_08135 PF01103 Surface antigen NP805_08140 PF04357 TamB, inner membrane protein subunit of TAM complex NP805_08160 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NP805_08165 PF03707 Bacterial signalling protein N terminal repeat NP805_08165 PF00990 Diguanylate cyclase, GGDEF domain NP805_08165 PF00563 EAL domain NP805_08170 PF01464 Transglycosylase SLT domain NP805_08170 PF14718 Soluble lytic murein transglycosylase L domain NP805_08175 PF00356 Bacterial regulatory proteins, lacI family NP805_08185 PF03061 Thioesterase superfamily NP805_08195 PF03372 Endonuclease/Exonuclease/phosphatase family NP805_08200 PF01464 Transglycosylase SLT domain NP805_08200 PF01476 LysM domain NP805_08205 PF16123 Hydroxyacylglutathione hydrolase C-terminus NP805_08205 PF00753 Metallo-beta-lactamase superfamily NP805_08210 PF08241 Methyltransferase domain NP805_08215 PF00075 RNase H NP805_08220 PF00929 Exonuclease NP805_08235 PF11849 Domain of unknown function (DUF3369) NP805_08240 PF09317 Domain of unknown function (DUF1974) NP805_08240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP805_08240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP805_08240 PF02770 Acyl-CoA dehydrogenase, middle domain NP805_08245 PF13580 SIS domain NP805_08250 PF13230 Glutamine amidotransferases class-II NP805_08260 PF01933 Uncharacterised protein family UPF0052 NP805_08270 PF17149 Periplasmic sensor domain found in signal transduction proteins NP805_08270 PF00672 HAMP domain NP805_08270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_08270 PF00512 His Kinase A (phospho-acceptor) domain NP805_08270 PF01627 Hpt domain NP805_08270 PF00072 Response regulator receiver domain NP805_08280 PF00196 Bacterial regulatory proteins, luxR family NP805_08280 PF00072 Response regulator receiver domain NP805_08285 PF07730 Histidine kinase NP805_08285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_08285 PF00672 HAMP domain NP805_08285 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NP805_08290 PF04055 Radical SAM superfamily NP805_08290 PF06463 Molybdenum Cofactor Synthesis C NP805_08295 PF12838 4Fe-4S dicluster domain NP805_08295 PF13187 4Fe-4S dicluster domain NP805_08305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NP805_08305 PF00384 Molybdopterin oxidoreductase NP805_08305 PF01568 Molydopterin dinucleotide binding domain NP805_08305 PF10518 TAT (twin-arginine translocation) pathway signal sequence NP805_08310 PF12800 4Fe-4S binding domain NP805_08310 PF12838 4Fe-4S dicluster domain NP805_08315 PF12801 4Fe-4S binding domain NP805_08315 PF12837 4Fe-4S binding domain NP805_08320 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) NP805_08325 PF03264 NapC/NirT cytochrome c family, N-terminal region NP805_08330 PF00994 Probable molybdopterin binding domain NP805_08335 PF01967 MoaC family NP805_08340 PF02597 ThiS family NP805_08345 PF02391 MoaE protein NP805_08355 PF00528 Binding-protein-dependent transport system inner membrane component NP805_08360 PF03459 TOBE domain NP805_08360 PF00005 ABC transporter NP805_08365 PF00561 alpha/beta hydrolase fold NP805_08370 PF00899 ThiF family NP805_08375 PF00994 Probable molybdopterin binding domain NP805_08375 PF03454 MoeA C-terminal region (domain IV) NP805_08375 PF03453 MoeA N-terminal region (domain I and II) NP805_08380 PF01227 GTP cyclohydrolase I NP805_08385 PF00672 HAMP domain NP805_08385 PF17200 Single Cache domain 2 NP805_08385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_08390 PF01268 Formate--tetrahydrofolate ligase NP805_08400 PF03466 LysR substrate binding domain NP805_08400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_08405 PF04264 YceI-like domain NP805_08430 PF07687 Peptidase dimerisation domain NP805_08430 PF01546 Peptidase family M20/M25/M40 NP805_08435 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NP805_08435 PF17944 Arginine decarboxylase C-terminal helical extension NP805_08435 PF17810 Arginine decarboxylase helical bundle domain NP805_08450 PF00300 Histidine phosphatase superfamily (branch 1) NP805_08455 PF00271 Helicase conserved C-terminal domain NP805_08455 PF04851 Type III restriction enzyme, res subunit NP805_08465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NP805_08475 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NP805_08475 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NP805_08485 PF01479 S4 domain NP805_08485 PF00849 RNA pseudouridylate synthase NP805_08490 PF09102 Exotoxin A, targeting NP805_08490 PF09009 Exotoxin A catalytic NP805_08490 PF09101 Exotoxin A binding NP805_08495 PF07690 Major Facilitator Superfamily NP805_08505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_08505 PF03466 LysR substrate binding domain NP805_08515 PF10689 Protein of unknown function (DUF2496) NP805_08525 PF04391 Protein of unknown function (DUF533) NP805_08530 PF00392 Bacterial regulatory proteins, gntR family NP805_08530 PF00155 Aminotransferase class I and II NP805_08535 PF01654 Cytochrome bd terminal oxidase subunit I NP805_08540 PF02322 Cytochrome bd terminal oxidase subunit II NP805_08550 PF07690 Major Facilitator Superfamily NP805_08555 PF00248 Aldo/keto reductase family NP805_08590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_08590 PF03466 LysR substrate binding domain NP805_08595 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NP805_08595 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NP805_08600 PF00230 Major intrinsic protein NP805_08605 PF07690 Major Facilitator Superfamily NP805_08610 PF00455 DeoR C terminal sensor domain NP805_08610 PF08220 DeoR-like helix-turn-helix domain NP805_08615 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NP805_08615 PF01266 FAD dependent oxidoreductase NP805_08620 PF03009 Glycerophosphoryl diester phosphodiesterase family NP805_08625 PF00793 DAHP synthetase I family NP805_08630 PF01817 Chorismate mutase type II NP805_08630 PF02153 Prephenate dehydrogenase NP805_08635 PF03466 LysR substrate binding domain NP805_08635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_08640 PF04219 Protein of unknown function, DUF NP805_08645 PF03974 Ecotin NP805_08680 PF12323 Helix-turn-helix domain NP805_08680 PF01385 Probable transposase NP805_08680 PF07282 Putative transposase DNA-binding domain NP805_08690 PF11893 Domain of unknown function (DUF3413) NP805_08690 PF00884 Sulfatase NP805_08695 PF07208 Protein of unknown function (DUF1414) NP805_08700 PF04245 37-kD nucleoid-associated bacterial protein NP805_08705 PF01547 Bacterial extracellular solute-binding protein NP805_08710 PF00528 Binding-protein-dependent transport system inner membrane component NP805_08710 PF14785 Maltose transport system permease protein MalF P2 domain NP805_08715 PF00528 Binding-protein-dependent transport system inner membrane component NP805_08720 PF00005 ABC transporter NP805_08720 PF08402 TOBE domain NP805_08725 PF03976 Polyphosphate kinase 2 (PPK2) NP805_08730 PF00561 alpha/beta hydrolase fold NP805_08735 PF01594 AI-2E family transporter NP805_08740 PF01206 Sulfurtransferase TusA NP805_08745 PF07720 Tetratricopeptide repeat NP805_08745 PF01435 Peptidase family M48 NP805_08750 PF00578 AhpC/TSA family NP805_08755 PF03960 ArsC family NP805_08765 PF04336 Acyl carrier protein phosphodiesterase NP805_08770 PF03956 Lysine exporter LysO NP805_08775 PF00005 ABC transporter NP805_08780 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP805_08785 PF00528 Binding-protein-dependent transport system inner membrane component NP805_08790 PF00528 Binding-protein-dependent transport system inner membrane component NP805_08805 PF04055 Radical SAM superfamily NP805_08810 PF00990 Diguanylate cyclase, GGDEF domain NP805_08810 PF00563 EAL domain NP805_08810 PF03707 Bacterial signalling protein N terminal repeat NP805_08815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NP805_08815 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP805_08820 PF07703 Alpha-2-macroglobulin bait region domain NP805_08820 PF07678 A-macroglobulin TED domain NP805_08820 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain NP805_08820 PF17962 Bacterial macroglobulin domain 6 NP805_08820 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain NP805_08820 PF11974 Bacterial alpha-2-macroglobulin MG3 domain NP805_08820 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain NP805_08820 PF00207 Alpha-2-macroglobulin family NP805_08820 PF01835 MG2 domain NP805_08825 PF06832 Penicillin-Binding Protein C-terminus Family NP805_08825 PF00905 Penicillin binding protein transpeptidase domain NP805_08825 PF00912 Transglycosylase NP805_08835 PF02568 Thiamine biosynthesis protein (ThiI) NP805_08835 PF02926 THUMP domain NP805_08845 PF03458 UPF0126 domain NP805_08850 PF00669 Bacterial flagellin N-terminal helical region NP805_08850 PF07196 Flagellin hook IN motif NP805_08850 PF00700 Bacterial flagellin C-terminal helical region NP805_08855 PF07196 Flagellin hook IN motif NP805_08855 PF00669 Bacterial flagellin N-terminal helical region NP805_08855 PF00700 Bacterial flagellin C-terminal helical region NP805_08865 PF02465 Flagellar hook-associated protein 2 N-terminus NP805_08865 PF07196 Flagellin hook IN motif NP805_08865 PF07195 Flagellar hook-associated protein 2 C-terminus NP805_08870 PF02561 Flagellar protein FliS NP805_08885 PF02348 Cytidylyltransferase NP805_08890 PF00483 Nucleotidyl transferase NP805_08900 PF02350 UDP-N-acetylglucosamine 2-epimerase NP805_08905 PF03102 NeuB family NP805_08905 PF08666 SAF domain NP805_08915 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NP805_08920 PF02719 Polysaccharide biosynthesis protein NP805_08925 PF01497 Periplasmic binding protein NP805_08935 PF01048 Phosphorylase superfamily NP805_08945 PF02535 ZIP Zinc transporter NP805_08950 PF12729 Four helix bundle sensory module for signal transduction NP805_08950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_08950 PF00672 HAMP domain NP805_08955 PF02371 Transposase IS116/IS110/IS902 family NP805_08955 PF01548 Transposase NP805_08960 PF00459 Inositol monophosphatase family NP805_08970 PF00043 Glutathione S-transferase, C-terminal domain NP805_08970 PF02798 Glutathione S-transferase, N-terminal domain NP805_08980 PF00528 Binding-protein-dependent transport system inner membrane component NP805_08985 PF00528 Binding-protein-dependent transport system inner membrane component NP805_08985 PF12911 N-terminal TM domain of oligopeptide transport permease C NP805_08990 PF00005 ABC transporter NP805_08995 PF07690 Major Facilitator Superfamily NP805_09000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_09000 PF03466 LysR substrate binding domain NP805_09005 PF02634 FdhD/NarQ family NP805_09010 PF00384 Molybdopterin oxidoreductase NP805_09020 PF05164 Cell division protein ZapA NP805_09025 PF03695 Uncharacterised protein family (UPF0149) NP805_09030 PF01494 FAD binding domain NP805_09035 PF01494 FAD binding domain NP805_09040 PF01571 Aminomethyltransferase folate-binding domain NP805_09040 PF08669 Glycine cleavage T-protein C-terminal barrel domain NP805_09045 PF01597 Glycine cleavage H-protein NP805_09050 PF02347 Glycine cleavage system P-protein NP805_09060 PF07690 Major Facilitator Superfamily NP805_09065 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP805_09065 PF13192 Thioredoxin domain NP805_09070 PF10417 C-terminal domain of 1-Cys peroxiredoxin NP805_09070 PF00578 AhpC/TSA family NP805_09075 PF00571 CBS domain NP805_09080 PF02547 Queuosine biosynthesis protein NP805_09085 PF01702 Queuine tRNA-ribosyltransferase NP805_09090 PF02699 Preprotein translocase subunit NP805_09095 PF02355 Protein export membrane protein NP805_09095 PF07549 SecD/SecF GG Motif NP805_09095 PF13721 SecD export protein N-terminal TM region NP805_09100 PF07549 SecD/SecF GG Motif NP805_09100 PF02355 Protein export membrane protein NP805_09110 PF13181 Tetratricopeptide repeat NP805_09110 PF07719 Tetratricopeptide repeat NP805_09115 PF01136 Peptidase family U32 NP805_09120 PF01136 Peptidase family U32 NP805_09125 PF02036 SCP-2 sterol transfer family NP805_09135 PF00588 SpoU rRNA Methylase family NP805_09140 PF02082 Transcriptional regulator NP805_09145 PF00266 Aminotransferase class-V NP805_09150 PF01592 NifU-like N terminal domain NP805_09155 PF01521 Iron-sulphur cluster biosynthesis NP805_09160 PF00226 DnaJ domain NP805_09160 PF07743 HSCB C-terminal oligomerisation domain NP805_09165 PF00012 Hsp70 protein NP805_09170 PF00111 2Fe-2S iron-sulfur cluster binding domain NP805_09175 PF12404 Peptidase NP805_09175 PF00883 Cytosol aminopeptidase family, catalytic domain NP805_09180 PF12404 Peptidase NP805_09180 PF00883 Cytosol aminopeptidase family, catalytic domain NP805_09185 PF00334 Nucleoside diphosphate kinase NP805_09190 PF04055 Radical SAM superfamily NP805_09200 PF13464 Domain of unknown function (DUF4115) NP805_09205 PF04551 GcpE protein NP805_09210 PF13393 Histidyl-tRNA synthetase NP805_09210 PF03129 Anticodon binding domain NP805_09215 PF09976 Tetratricopeptide repeat-like domain NP805_09220 PF13360 PQQ-like domain NP805_09225 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NP805_09225 PF01926 50S ribosome-binding GTPase NP805_09230 PF07191 zinc-ribbons NP805_09240 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP805_09240 PF01464 Transglycosylase SLT domain NP805_09245 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NP805_09245 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NP805_09245 PF02769 AIR synthase related protein, C-terminal domain NP805_09255 PF05661 Protein of unknown function (DUF808) NP805_09260 PF08439 Oligopeptidase F NP805_09260 PF01432 Peptidase family M3 NP805_09265 PF08439 Oligopeptidase F NP805_09265 PF01432 Peptidase family M3 NP805_09270 PF05728 Uncharacterised protein family (UPF0227) NP805_09275 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP805_09280 PF01906 Putative heavy-metal-binding NP805_09290 PF02016 LD-carboxypeptidase N-terminal domain NP805_09290 PF17676 LD-carboxypeptidase C-terminal domain NP805_09295 PF00884 Sulfatase NP805_09305 PF01842 ACT domain NP805_09305 PF00696 Amino acid kinase family NP805_09310 PF00696 Amino acid kinase family NP805_09310 PF00583 Acetyltransferase (GNAT) family NP805_09315 PF01625 Peptide methionine sulfoxide reductase NP805_09335 PF00561 alpha/beta hydrolase fold NP805_09345 PF02308 MgtC family NP805_09360 PF12704 MacB-like periplasmic core domain NP805_09360 PF02687 FtsX-like permease family NP805_09365 PF00005 ABC transporter NP805_09375 PF03600 Citrate transporter NP805_09380 PF07690 Major Facilitator Superfamily NP805_09400 PF01593 Flavin containing amine oxidoreductase NP805_09405 PF03239 Iron permease FTR1 family NP805_09440 PF01740 STAS domain NP805_09440 PF00916 Sulfate permease family NP805_09450 PF05638 Type VI secretion system effector, Hcp NP805_09460 PF03496 ADP-ribosyltransferase exoenzyme NP805_09460 PF03534 Salmonella virulence plasmid 65kDa B protein NP805_09490 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NP805_09500 PF05947 Type VI secretion system, TssF NP805_09520 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE NP805_09530 PF00004 ATPase family associated with various cellular activities (AAA) NP805_09530 PF07724 AAA domain (Cdc48 subfamily) NP805_09530 PF17871 AAA lid domain NP805_09530 PF10431 C-terminal, D2-small domain, of ClpB protein NP805_09535 PF00158 Sigma-54 interaction domain NP805_09535 PF02954 Bacterial regulatory protein, Fis family NP805_09550 PF14331 ImcF-related N-terminal domain NP805_09550 PF06744 Type VI secretion protein IcmF C-terminal NP805_09550 PF06761 Intracellular multiplication and human macrophage-killing NP805_09565 PF04717 Type VI secretion system, phage-baseplate injector NP805_09575 PF05598 Transposase domain (DUF772) NP805_09575 PF01609 Transposase DDE domain NP805_09585 PF00672 HAMP domain NP805_09585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_09595 PF13737 Transposase DDE domain NP805_09620 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NP805_09620 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NP805_09625 PF00313 'Cold-shock' DNA-binding domain NP805_09630 PF02617 ATP-dependent Clp protease adaptor protein ClpS NP805_09635 PF02861 Clp amino terminal domain, pathogenicity island component NP805_09635 PF00004 ATPase family associated with various cellular activities (AAA) NP805_09635 PF10431 C-terminal, D2-small domain, of ClpB protein NP805_09635 PF17871 AAA lid domain NP805_09635 PF07724 AAA domain (Cdc48 subfamily) NP805_09640 PF01176 Translation initiation factor 1A / IF-1 NP805_09645 PF04377 Arginine-tRNA-protein transferase, C terminus NP805_09645 PF04376 Arginine-tRNA-protein transferase, N terminus NP805_09650 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NP805_09655 PF05433 Glycine zipper 2TM domain NP805_09660 PF00990 Diguanylate cyclase, GGDEF domain NP805_09660 PF17158 Membrane-associated sensor, integral membrane domain NP805_09665 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP805_09675 PF01037 Lrp/AsnC ligand binding domain NP805_09680 PF01580 FtsK/SpoIIIE family NP805_09680 PF09397 Ftsk gamma domain NP805_09680 PF17854 FtsK alpha domain NP805_09680 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NP805_09685 PF03548 Outer membrane lipoprotein carrier protein LolA NP805_09690 PF16193 AAA C-terminal domain NP805_09690 PF12002 MgsA AAA+ ATPase C terminal NP805_09690 PF00004 ATPase family associated with various cellular activities (AAA) NP805_09695 PF02403 Seryl-tRNA synthetase N-terminal domain NP805_09695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NP805_09700 PF02674 Colicin V production protein NP805_09705 PF00156 Phosphoribosyl transferase domain NP805_09710 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NP805_09715 PF00005 ABC transporter NP805_09720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP805_09720 PF00005 ABC transporter NP805_09725 PF00528 Binding-protein-dependent transport system inner membrane component NP805_09725 PF12911 N-terminal TM domain of oligopeptide transport permease C NP805_09730 PF00528 Binding-protein-dependent transport system inner membrane component NP805_09735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP805_09740 PF02954 Bacterial regulatory protein, Fis family NP805_09740 PF00158 Sigma-54 interaction domain NP805_09745 PF04012 PspA/IM30 family NP805_09750 PF06667 Phage shock protein B NP805_09760 PF04317 YcjX-like family, DUF463 NP805_09765 PF05128 Domain of unknown function (DUF697) NP805_09770 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NP805_09775 PF01329 Pterin 4 alpha carbinolamine dehydratase NP805_09780 PF18024 Helix-turn-helix domain NP805_09780 PF00158 Sigma-54 interaction domain NP805_09785 PF13689 YfiR/HmsC-like NP805_09790 PF00990 Diguanylate cyclase, GGDEF domain NP805_09790 PF17152 Periplasmic sensor domain NP805_09795 PF00691 OmpA family NP805_09805 PF08891 YfcL protein NP805_09810 PF00501 AMP-binding enzyme NP805_09815 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NP805_09815 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region NP805_09820 PF04172 LrgB-like family NP805_09825 PF03788 LrgA family NP805_09845 PF00929 Exonuclease NP805_09845 PF08411 Exonuclease C-terminal NP805_09850 PF00149 Calcineurin-like phosphoesterase NP805_09855 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP805_09860 PF00795 Carbon-nitrogen hydrolase NP805_09865 PF00155 Aminotransferase class I and II NP805_09870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_09870 PF03466 LysR substrate binding domain NP805_09875 PF02610 L-arabinose isomerase NP805_09875 PF11762 L-arabinose isomerase C-terminal domain NP805_09880 PF00596 Class II Aldolase and Adducin N-terminal domain NP805_09885 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NP805_09890 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NP805_09895 PF00005 ABC transporter NP805_09900 PF02653 Branched-chain amino acid transport system / permease component NP805_09905 PF12833 Helix-turn-helix domain NP805_09905 PF02311 AraC-like ligand binding domain NP805_09910 PF08544 GHMP kinases C terminal NP805_09910 PF00288 GHMP kinases N terminal domain NP805_09910 PF10509 Galactokinase galactose-binding signature NP805_09915 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NP805_09915 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NP805_09920 PF16363 GDP-mannose 4,6 dehydratase NP805_09925 PF00356 Bacterial regulatory proteins, lacI family NP805_09930 PF02264 LamB porin NP805_09935 PF07745 Glycosyl hydrolase family 53 NP805_09940 PF07745 Glycosyl hydrolase family 53 NP805_09950 PF00672 HAMP domain NP805_09950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_09955 PF17912 MalK OB fold domain NP805_09955 PF00005 ABC transporter NP805_09960 PF13416 Bacterial extracellular solute-binding protein NP805_09965 PF00528 Binding-protein-dependent transport system inner membrane component NP805_09970 PF00528 Binding-protein-dependent transport system inner membrane component NP805_09975 PF07745 Glycosyl hydrolase family 53 NP805_09980 PF02449 Beta-galactosidase NP805_09980 PF08533 Beta-galactosidase C-terminal domain NP805_09980 PF08532 Beta-galactosidase trimerisation domain NP805_09985 PF00367 phosphotransferase system, EIIB NP805_09985 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NP805_09990 PF00224 Pyruvate kinase, barrel domain NP805_09990 PF02887 Pyruvate kinase, alpha/beta domain NP805_09995 PF00444 Ribosomal protein L36 NP805_10000 PF01197 Ribosomal protein L31 NP805_10015 PF01863 Protein of unknown function DUF45 NP805_10030 PF03606 C4-dicarboxylate anaerobic carrier NP805_10040 PF01266 FAD dependent oxidoreductase NP805_10040 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NP805_10045 PF00109 Beta-ketoacyl synthase, N-terminal domain NP805_10045 PF02801 Beta-ketoacyl synthase, C-terminal domain NP805_10060 PF00285 Citrate synthase, C-terminal domain NP805_10065 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NP805_10070 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NP805_10075 PF02910 Fumarate reductase flavoprotein C-term NP805_10075 PF00890 FAD binding domain NP805_10080 PF13085 2Fe-2S iron-sulfur cluster binding domain NP805_10085 PF16078 2-oxoglutarate dehydrogenase N-terminus NP805_10085 PF00676 Dehydrogenase E1 component NP805_10085 PF16870 2-oxoglutarate dehydrogenase C-terminal NP805_10085 PF02779 Transketolase, pyrimidine binding domain NP805_10090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NP805_10090 PF00364 Biotin-requiring enzyme NP805_10090 PF02817 e3 binding domain NP805_10095 PF08442 ATP-grasp domain NP805_10095 PF00549 CoA-ligase NP805_10100 PF02629 CoA binding domain NP805_10100 PF00549 CoA-ligase NP805_10105 PF03692 Putative zinc- or iron-chelating domain NP805_10110 PF02901 Pyruvate formate lyase-like NP805_10110 PF01228 Glycine radical NP805_10115 PF01226 Formate/nitrite transporter NP805_10120 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding NP805_10120 PF18381 YcaO cyclodehydratase C-terminal domain NP805_10125 PF01118 Semialdehyde dehydrogenase, NAD binding domain NP805_10125 PF02774 Semialdehyde dehydrogenase, dimerisation domain NP805_10130 PF00675 Insulinase (Peptidase family M16) NP805_10130 PF05193 Peptidase M16 inactive domain NP805_10135 PF01053 Cys/Met metabolism PLP-dependent enzyme NP805_10145 PF00582 Universal stress protein family NP805_10150 PF05598 Transposase domain (DUF772) NP805_10150 PF01609 Transposase DDE domain NP805_10155 PF00582 Universal stress protein family NP805_10160 PF00999 Sodium/hydrogen exchanger family NP805_10160 PF02080 TrkA-C domain NP805_10160 PF02254 TrkA-N domain NP805_10165 PF13460 NAD(P)H-binding NP805_10170 PF03466 LysR substrate binding domain NP805_10170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_10175 PF00106 short chain dehydrogenase NP805_10180 PF12833 Helix-turn-helix domain NP805_10180 PF06445 GyrI-like small molecule binding domain NP805_10185 PF07715 TonB-dependent Receptor Plug Domain NP805_10185 PF00593 TonB dependent receptor NP805_10195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_10195 PF03466 LysR substrate binding domain NP805_10200 PF01717 Cobalamin-independent synthase, Catalytic domain NP805_10200 PF08267 Cobalamin-independent synthase, N-terminal domain NP805_10210 PF00571 CBS domain NP805_10215 PF07969 Amidohydrolase family NP805_10225 PF01266 FAD dependent oxidoreductase NP805_10240 PF01212 Beta-eliminating lyase NP805_10245 PF00768 D-alanyl-D-alanine carboxypeptidase NP805_10255 PF03918 Cytochrome C biogenesis protein NP805_10260 PF08534 Redoxin NP805_10265 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NP805_10265 PF01578 Cytochrome C assembly protein NP805_10270 PF03916 Polysulphide reductase, NrfD NP805_10275 PF00037 4Fe-4S binding domain NP805_10275 PF13247 4Fe-4S dicluster domain NP805_10280 PF13435 Cytochrome c554 and c-prime NP805_10280 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) NP805_10285 PF02335 Cytochrome c552 NP805_10290 PF13183 4Fe-4S dicluster domain NP805_10290 PF02754 Cysteine-rich domain NP805_10295 PF00890 FAD binding domain NP805_10300 PF04324 BFD-like [2Fe-2S] binding domain NP805_10300 PF01266 FAD dependent oxidoreductase NP805_10305 PF02810 SEC-C motif NP805_10310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_10310 PF17200 Single Cache domain 2 NP805_10310 PF00672 HAMP domain NP805_10315 PF00480 ROK family NP805_10315 PF01047 MarR family NP805_10320 PF00989 PAS fold NP805_10320 PF17203 Single cache domain 3 NP805_10320 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NP805_10320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_10325 PF00072 Response regulator receiver domain NP805_10325 PF12431 Transcriptional regulator NP805_10325 PF08279 HTH domain NP805_10330 PF01970 Tripartite tricarboxylate transporter TctA family NP805_10345 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP805_10345 PF01464 Transglycosylase SLT domain NP805_10350 PF06826 Predicted Permease Membrane Region NP805_10350 PF02080 TrkA-C domain NP805_10360 PF00271 Helicase conserved C-terminal domain NP805_10360 PF04851 Type III restriction enzyme, res subunit NP805_10360 PF12344 Ultra-violet resistance protein B NP805_10360 PF17757 UvrB interaction domain NP805_10360 PF02151 UvrB/uvrC motif NP805_10370 PF09335 SNARE associated Golgi protein NP805_10375 PF01609 Transposase DDE domain NP805_10375 PF13006 Insertion element 4 transposase N-terminal NP805_10380 PF02600 Disulfide bond formation protein DsbB NP805_10390 PF06450 Bacterial Na+/H+ antiporter B (NhaB) NP805_10395 PF07840 FadR C-terminal domain NP805_10395 PF00392 Bacterial regulatory proteins, gntR family NP805_10400 PF04293 SpoVR like protein NP805_10405 PF04285 Protein of unknown function (DUF444) NP805_10410 PF08298 PrkA AAA domain NP805_10410 PF06798 PrkA serine protein kinase C-terminal domain NP805_10415 PF00270 DEAD/DEAH box helicase NP805_10415 PF00271 Helicase conserved C-terminal domain NP805_10415 PF00570 HRDC domain NP805_10415 PF16124 RecQ zinc-binding NP805_10415 PF09382 RQC domain NP805_10420 PF00375 Sodium:dicarboxylate symporter family NP805_10425 PF03222 Tryptophan/tyrosine permease family NP805_10430 PF00293 NUDIX domain NP805_10435 PF04715 Anthranilate synthase component I, N terminal region NP805_10435 PF00425 chorismate binding enzyme NP805_10445 PF01609 Transposase DDE domain NP805_10445 PF13006 Insertion element 4 transposase N-terminal NP805_10465 PF00343 Carbohydrate phosphorylase NP805_10470 PF00939 Sodium:sulfate symporter transmembrane region NP805_10475 PF00085 Thioredoxin NP805_10480 PF00512 His Kinase A (phospho-acceptor) domain NP805_10480 PF01627 Hpt domain NP805_10480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_10480 PF00072 Response regulator receiver domain NP805_10480 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NP805_10480 PF00672 HAMP domain NP805_10485 PF00005 ABC transporter NP805_10485 PF00664 ABC transporter transmembrane region NP805_10490 PF00664 ABC transporter transmembrane region NP805_10490 PF00005 ABC transporter NP805_10505 PF01575 MaoC like domain NP805_10510 PF00561 alpha/beta hydrolase fold NP805_10510 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NP805_10530 PF08543 Phosphomethylpyrimidine kinase NP805_10535 PF03992 Antibiotic biosynthesis monooxygenase NP805_10540 PF00465 Iron-containing alcohol dehydrogenase NP805_10560 PF01928 CYTH domain NP805_10575 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NP805_10585 PF13673 Acetyltransferase (GNAT) domain NP805_10590 PF00271 Helicase conserved C-terminal domain NP805_10590 PF00270 DEAD/DEAH box helicase NP805_10595 PF00255 Glutathione peroxidase NP805_10605 PF01820 D-ala D-ala ligase N-terminus NP805_10605 PF07478 D-ala D-ala ligase C-terminus NP805_10615 PF03942 DTW domain NP805_10620 PF01925 Sulfite exporter TauE/SafE NP805_10625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_10625 PF03466 LysR substrate binding domain NP805_10635 PF14525 AraC-binding-like domain NP805_10635 PF12833 Helix-turn-helix domain NP805_10640 PF11398 Protein of unknown function (DUF2813) NP805_10650 PF00128 Alpha amylase, catalytic domain NP805_10650 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NP805_10700 PF00883 Cytosol aminopeptidase family, catalytic domain NP805_10700 PF02789 Cytosol aminopeptidase family, N-terminal domain NP805_10705 PF13419 Haloacid dehalogenase-like hydrolase NP805_10710 PF07687 Peptidase dimerisation domain NP805_10710 PF01546 Peptidase family M20/M25/M40 NP805_10720 PF00365 Phosphofructokinase NP805_10725 PF00121 Triosephosphate isomerase NP805_10730 PF02698 DUF218 domain NP805_10735 PF13847 Methyltransferase domain NP805_10740 PF03882 MukF winged-helix domain NP805_10740 PF17193 MukF C-terminal domain NP805_10740 PF17192 MukF middle domain NP805_10745 PF04288 MukE-like family NP805_10750 PF04310 MukB N-terminal NP805_10750 PF16330 MukB hinge domain NP805_10755 PF03330 Lytic transglycolase NP805_10755 PF05036 Sporulation related domain NP805_10775 PF01327 Polypeptide deformylase NP805_10780 PF05598 Transposase domain (DUF772) NP805_10780 PF01609 Transposase DDE domain NP805_10785 PF05598 Transposase domain (DUF772) NP805_10785 PF01609 Transposase DDE domain NP805_10815 PF07152 YaeQ protein NP805_10825 PF07690 Major Facilitator Superfamily NP805_10830 PF00005 ABC transporter NP805_10835 PF01032 FecCD transport family NP805_10850 PF05433 Glycine zipper 2TM domain NP805_10860 PF03606 C4-dicarboxylate anaerobic carrier NP805_10865 PF13358 DDE superfamily endonuclease NP805_10865 PF13592 Winged helix-turn helix NP805_10870 PF13193 AMP-binding enzyme C-terminal domain NP805_10870 PF00501 AMP-binding enzyme NP805_10880 PF01609 Transposase DDE domain NP805_10880 PF05598 Transposase domain (DUF772) NP805_10890 PF01502 Phosphoribosyl-AMP cyclohydrolase NP805_10890 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NP805_10895 PF00977 Histidine biosynthesis protein NP805_10900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_10900 PF00512 His Kinase A (phospho-acceptor) domain NP805_10900 PF01627 Hpt domain NP805_10900 PF00072 Response regulator receiver domain NP805_10905 PF00990 Diguanylate cyclase, GGDEF domain NP805_10905 PF08448 PAS fold NP805_10910 PF00072 Response regulator receiver domain NP805_10915 PF00977 Histidine biosynthesis protein NP805_10920 PF00117 Glutamine amidotransferase class-I NP805_10925 PF00475 Imidazoleglycerol-phosphate dehydratase NP805_10925 PF08645 Polynucleotide kinase 3 phosphatase NP805_10930 PF00155 Aminotransferase class I and II NP805_10935 PF00815 Histidinol dehydrogenase NP805_10940 PF01634 ATP phosphoribosyltransferase NP805_10940 PF08029 HisG, C-terminal domain NP805_10950 PF04851 Type III restriction enzyme, res subunit NP805_10950 PF13307 Helicase C-terminal domain NP805_10955 PF00814 Glycoprotease family NP805_10965 PF12697 Alpha/beta hydrolase family NP805_10970 PF00501 AMP-binding enzyme NP805_10970 PF13193 AMP-binding enzyme C-terminal domain NP805_10975 PF01612 3'-5' exonuclease NP805_10975 PF00570 HRDC domain NP805_10990 PF01207 Dihydrouridine synthase (Dus) NP805_10995 PF04304 Protein of unknown function (DUF454) NP805_11000 PF00156 Phosphoribosyl transferase domain NP805_11005 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NP805_11005 PF12170 DNA polymerase III tau subunit V interacting with alpha NP805_11005 PF12169 DNA polymerase III subunits gamma and tau domain III NP805_11010 PF02575 YbaB/EbfC DNA-binding family NP805_11015 PF07670 Nucleoside recognition NP805_11020 PF00072 Response regulator receiver domain NP805_11020 PF00196 Bacterial regulatory proteins, luxR family NP805_11025 PF00571 CBS domain NP805_11025 PF01368 DHH family NP805_11025 PF02272 DHHA1 domain NP805_11025 PF01743 Poly A polymerase head domain NP805_11030 PF00270 DEAD/DEAH box helicase NP805_11030 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NP805_11030 PF00271 Helicase conserved C-terminal domain NP805_11030 PF04408 Helicase associated domain (HA2) NP805_11030 PF11898 Domain of unknown function (DUF3418) NP805_11040 PF01386 Ribosomal L25p family NP805_11045 PF00753 Metallo-beta-lactamase superfamily NP805_11055 PF02769 AIR synthase related protein, C-terminal domain NP805_11055 PF00586 AIR synthase related protein, N-terminal domain NP805_11070 PF17785 PUA-like domain NP805_11070 PF10672 S-adenosylmethionine-dependent methyltransferase NP805_11075 PF00672 HAMP domain NP805_11075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_11075 PF12729 Four helix bundle sensory module for signal transduction NP805_11080 PF00708 Acylphosphatase NP805_11085 PF13417 Glutathione S-transferase, N-terminal domain NP805_11085 PF00043 Glutathione S-transferase, C-terminal domain NP805_11090 PF01588 Putative tRNA binding domain NP805_11090 PF09334 tRNA synthetases class I (M) NP805_11090 PF08264 Anticodon-binding domain of tRNA NP805_11095 PF10609 NUBPL iron-transfer P-loop NTPase NP805_11100 PF00485 Phosphoribulokinase / Uridine kinase family NP805_11105 PF00692 dUTPase NP805_11110 PF01384 Phosphate transporter family NP805_11115 PF00575 S1 RNA binding domain NP805_11115 PF12111 Polyribonucleotide phosphorylase C terminal NP805_11115 PF10150 Ribonuclease E/G family NP805_11120 PF00849 RNA pseudouridylate synthase NP805_11120 PF01479 S4 domain NP805_11125 PF13419 Haloacid dehalogenase-like hydrolase NP805_11130 PF02545 Maf-like protein NP805_11135 PF02620 Large ribosomal RNA subunit accumulation protein YceD NP805_11140 PF01783 Ribosomal L32p protein family NP805_11145 PF02504 Fatty acid synthesis protein NP805_11150 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NP805_11150 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NP805_11155 PF00698 Acyl transferase domain NP805_11165 PF00550 Phosphopantetheine attachment site NP805_11170 PF00109 Beta-ketoacyl synthase, N-terminal domain NP805_11170 PF02801 Beta-ketoacyl synthase, C-terminal domain NP805_11175 PF01063 Amino-transferase class IV NP805_11180 PF02618 YceG-like family NP805_11185 PF02223 Thymidylate kinase NP805_11190 PF09115 DNA polymerase III, delta subunit, C terminal NP805_11195 PF01026 TatD related DNase NP805_11200 PF00589 Phage integrase family NP805_11210 PF01189 16S rRNA methyltransferase RsmB/F NP805_11210 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF NP805_11210 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF NP805_11215 PF02470 MlaD protein NP805_11220 PF04403 Paraquat-inducible protein A NP805_11235 PF00285 Citrate synthase, C-terminal domain NP805_11240 PF03972 MmgE/PrpD family NP805_11255 PF01609 Transposase DDE domain NP805_11255 PF13808 DDE_Tnp_1-associated NP805_11285 PF13654 AAA domain NP805_11285 PF05362 Lon protease (S16) C-terminal proteolytic domain NP805_11290 PF07977 FabA-like domain NP805_11295 PF04957 Ribosome modulation factor NP805_11305 PF00005 ABC transporter NP805_11305 PF16326 ABC transporter C-terminal domain NP805_11305 PF12848 ABC transporter NP805_11315 PF01170 Putative RNA methylase family UPF0020 NP805_11315 PF02926 THUMP domain NP805_11315 PF10672 S-adenosylmethionine-dependent methyltransferase NP805_11320 PF07126 Cell-division protein ZapC NP805_11325 PF01180 Dihydroorotate dehydrogenase NP805_11330 PF05088 Bacterial NAD-glutamate dehydrogenase NP805_11340 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NP805_11340 PF01433 Peptidase family M1 domain NP805_11340 PF11940 Domain of unknown function (DUF3458) Ig-like fold NP805_11345 PF11818 C-terminal domain of tail specific protease (DUF3340) NP805_11345 PF00595 PDZ domain NP805_11345 PF03572 Peptidase family S41 NP805_11345 PF17804 Tail specific protease N-terminal domain NP805_11350 PF04352 ProQ/FINO family NP805_11350 PF17516 ProQ C-terminal domain NP805_11355 PF13185 GAF domain NP805_11365 PF00115 Cytochrome C and Quinol oxidase polypeptide I NP805_11380 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NP805_11380 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP NP805_11390 PF00403 Heavy-metal-associated domain NP805_11405 PF13545 Crp-like helix-turn-helix domain NP805_11405 PF00027 Cyclic nucleotide-binding domain NP805_11410 PF00582 Universal stress protein family NP805_11415 PF01171 PP-loop family NP805_11430 PF00043 Glutathione S-transferase, C-terminal domain NP805_11430 PF02798 Glutathione S-transferase, N-terminal domain NP805_11435 PF05025 RbsD / FucU transport protein family NP805_11440 PF00005 ABC transporter NP805_11445 PF02653 Branched-chain amino acid transport system / permease component NP805_11450 PF13407 Periplasmic binding protein domain NP805_11455 PF00294 pfkB family carbohydrate kinase NP805_11460 PF00356 Bacterial regulatory proteins, lacI family NP805_11465 PF00990 Diguanylate cyclase, GGDEF domain NP805_11465 PF17152 Periplasmic sensor domain NP805_11475 PF02146 Sir2 family NP805_11490 PF00072 Response regulator receiver domain NP805_11490 PF09456 RcsC Alpha-Beta-Loop (ABL) NP805_11490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_11490 PF00512 His Kinase A (phospho-acceptor) domain NP805_11495 PF00216 Bacterial DNA-binding protein NP805_11500 PF03483 B3/4 domain NP805_11500 PF03484 tRNA synthetase B5 domain NP805_11500 PF03147 Ferredoxin-fold anticodon binding domain NP805_11500 PF01588 Putative tRNA binding domain NP805_11500 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NP805_11505 PF01409 tRNA synthetases class II core domain (F) NP805_11505 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NP805_11510 PF00453 Ribosomal protein L20 NP805_11515 PF01632 Ribosomal protein L35 NP805_11520 PF05198 Translation initiation factor IF-3, N-terminal domain NP805_11520 PF00707 Translation initiation factor IF-3, C-terminal domain NP805_11525 PF02824 TGS domain NP805_11525 PF03129 Anticodon binding domain NP805_11525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NP805_11525 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NP805_11535 PF04055 Radical SAM superfamily NP805_11540 PF01609 Transposase DDE domain NP805_11540 PF13006 Insertion element 4 transposase N-terminal NP805_11545 PF03989 DNA gyrase C-terminal domain, beta-propeller NP805_11545 PF00521 DNA gyrase/topoisomerase IV, subunit A NP805_11555 PF13419 Haloacid dehalogenase-like hydrolase NP805_11560 PF00317 Ribonucleotide reductase, all-alpha domain NP805_11560 PF03477 ATP cone domain NP805_11560 PF02867 Ribonucleotide reductase, barrel domain NP805_11565 PF00268 Ribonucleotide reductase, small chain NP805_11570 PF00111 2Fe-2S iron-sulfur cluster binding domain NP805_11575 PF06725 3D domain NP805_11575 PF03562 MltA specific insert domain NP805_11580 PF06945 Protein of unknown function (DUF1289) NP805_11585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NP805_11585 PF02378 Phosphotransferase system, EIIC NP805_11590 PF00294 pfkB family carbohydrate kinase NP805_11595 PF00381 PTS HPr component phosphorylation site NP805_11595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NP805_11600 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NP805_11600 PF00356 Bacterial regulatory proteins, lacI family NP805_11605 PF03222 Tryptophan/tyrosine permease family NP805_11620 PF00271 Helicase conserved C-terminal domain NP805_11620 PF00270 DEAD/DEAH box helicase NP805_11630 PF01264 Chorismate synthase NP805_11635 PF05175 Methyltransferase small domain NP805_11640 PF01713 Smr domain NP805_11645 PF08448 PAS fold NP805_11645 PF00990 Diguanylate cyclase, GGDEF domain NP805_11665 PF08329 Chitinase A, N-terminal domain NP805_11665 PF00704 Glycosyl hydrolases family 18 NP805_11675 PF08274 PhnA Zinc-Ribbon NP805_11675 PF03831 PhnA domain NP805_11680 PF00378 Enoyl-CoA hydratase/isomerase NP805_11680 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NP805_11680 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NP805_11685 PF00108 Thiolase, N-terminal domain NP805_11685 PF02803 Thiolase, C-terminal domain NP805_11690 PF17863 AAA lid domain NP805_11690 PF07726 ATPase family associated with various cellular activities (AAA) NP805_11695 PF01882 Protein of unknown function DUF58 NP805_11705 PF13519 von Willebrand factor type A domain NP805_11705 PF17863 AAA lid domain NP805_11705 PF07728 AAA domain (dynein-related subfamily) NP805_11720 PF04545 Sigma-70, region 4 NP805_11720 PF04542 Sigma-70 region 2 NP805_11730 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NP805_11735 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NP805_11740 PF00563 EAL domain NP805_11740 PF08668 HDOD domain NP805_11745 PF02803 Thiolase, C-terminal domain NP805_11745 PF00108 Thiolase, N-terminal domain NP805_11750 PF09278 MerR, DNA binding NP805_11750 PF00376 MerR family regulatory protein NP805_11755 PF00375 Sodium:dicarboxylate symporter family NP805_11760 PF06865 Pyrimidine/purine nucleoside phosphorylase NP805_11765 PF03315 Serine dehydratase beta chain NP805_11765 PF03313 Serine dehydratase alpha chain NP805_11770 PF03315 Serine dehydratase beta chain NP805_11770 PF03313 Serine dehydratase alpha chain NP805_11775 PF13406 Transglycosylase SLT domain NP805_11780 PF05166 YcgL domain NP805_11785 PF05209 Septum formation inhibitor MinC, N-terminal domain NP805_11785 PF03775 Septum formation inhibitor MinC, C-terminal domain NP805_11790 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NP805_11795 PF03776 Septum formation topological specificity factor MinE NP805_11800 PF04269 Protein of unknown function, DUF440 NP805_11805 PF00912 Transglycosylase NP805_11815 PF04269 Protein of unknown function, DUF440 NP805_11825 PF13509 S1 domain NP805_11825 PF17783 CvfB-like winged helix domain NP805_11850 PF02525 Flavodoxin-like fold NP805_11855 PF00892 EamA-like transporter family NP805_11860 PF02222 ATP-grasp domain NP805_11865 PF13419 Haloacid dehalogenase-like hydrolase NP805_11875 PF00677 Lumazine binding domain NP805_11880 PF06786 Uncharacterised protein family (UPF0253) NP805_11885 PF01554 MatE NP805_11940 PF02384 N-6 DNA Methylase NP805_11950 PF13784 Fic/DOC family N-terminal NP805_11950 PF02661 Fic/DOC family NP805_11955 PF11867 Domain of unknown function (DUF3387) NP805_11955 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NP805_11955 PF18766 SWI2/SNF2 ATPase NP805_11995 PF13592 Winged helix-turn helix NP805_11995 PF13358 DDE superfamily endonuclease NP805_12025 PF00004 ATPase family associated with various cellular activities (AAA) NP805_12025 PF17866 AAA lid domain NP805_12045 PF03050 Transposase IS66 family NP805_12045 PF13817 IS66 C-terminal element NP805_12045 PF13007 Transposase C of IS166 homeodomain NP805_12045 PF13005 zinc-finger binding domain of transposase IS66 NP805_12155 PF13358 DDE superfamily endonuclease NP805_12155 PF13592 Winged helix-turn helix NP805_12160 PF03104 DNA polymerase family B, exonuclease domain NP805_12160 PF00136 DNA polymerase family B NP805_12170 PF00990 Diguanylate cyclase, GGDEF domain NP805_12185 PF03279 Bacterial lipid A biosynthesis acyltransferase NP805_12190 PF03279 Bacterial lipid A biosynthesis acyltransferase NP805_12200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_12200 PF03466 LysR substrate binding domain NP805_12205 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NP805_12205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NP805_12210 PF01261 Xylose isomerase-like TIM barrel NP805_12215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_12215 PF03466 LysR substrate binding domain NP805_12225 PF00232 Glycosyl hydrolase family 1 NP805_12230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_12230 PF03466 LysR substrate binding domain NP805_12235 PF13407 Periplasmic binding protein domain NP805_12240 PF00005 ABC transporter NP805_12245 PF02653 Branched-chain amino acid transport system / permease component NP805_12250 PF02653 Branched-chain amino acid transport system / permease component NP805_12255 PF00360 Phytochrome region NP805_12255 PF00990 Diguanylate cyclase, GGDEF domain NP805_12255 PF01590 GAF domain NP805_12255 PF00563 EAL domain NP805_12260 PF04972 BON domain NP805_12285 PF01338 Bacillus thuringiensis toxin NP805_12335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_12335 PF03466 LysR substrate binding domain NP805_12340 PF00881 Nitroreductase family NP805_12350 PF02321 Outer membrane efflux protein NP805_12355 PF00873 AcrB/AcrD/AcrF family NP805_12370 PF09615 CRISPR-associated protein (Cas_Csy3) NP805_12395 PF13401 AAA domain NP805_12395 PF01471 Putative peptidoglycan binding domain NP805_12415 PF01925 Sulfite exporter TauE/SafE NP805_12420 PF13520 Amino acid permease NP805_12430 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NP805_12430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NP805_12435 PF00378 Enoyl-CoA hydratase/isomerase NP805_12440 PF00378 Enoyl-CoA hydratase/isomerase NP805_12445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP805_12445 PF02770 Acyl-CoA dehydrogenase, middle domain NP805_12445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP805_12450 PF00171 Aldehyde dehydrogenase family NP805_12455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP805_12455 PF02770 Acyl-CoA dehydrogenase, middle domain NP805_12455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP805_12460 PF01039 Carboxyl transferase domain NP805_12465 PF00378 Enoyl-CoA hydratase/isomerase NP805_12470 PF00364 Biotin-requiring enzyme NP805_12470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NP805_12470 PF00289 Biotin carboxylase, N-terminal domain NP805_12470 PF02785 Biotin carboxylase C-terminal domain NP805_12475 PF00682 HMGL-like NP805_12480 PF09278 MerR, DNA binding NP805_12480 PF00376 MerR family regulatory protein NP805_12495 PF01184 GPR1/FUN34/yaaH family NP805_12500 PF06167 Glucose-regulated metallo-peptidase M90 NP805_12505 PF00583 Acetyltransferase (GNAT) family NP805_12510 PF01235 Sodium:alanine symporter family NP805_12515 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NP805_12515 PF00378 Enoyl-CoA hydratase/isomerase NP805_12515 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NP805_12525 PF00571 CBS domain NP805_12530 PF00474 Sodium:solute symporter family NP805_12540 PF00005 ABC transporter NP805_12540 PF12848 ABC transporter NP805_12545 PF13145 PPIC-type PPIASE domain NP805_12550 PF00216 Bacterial DNA-binding protein NP805_12555 PF02190 ATP-dependent protease La (LON) substrate-binding domain NP805_12555 PF05362 Lon protease (S16) C-terminal proteolytic domain NP805_12555 PF00004 ATPase family associated with various cellular activities (AAA) NP805_12560 PF10431 C-terminal, D2-small domain, of ClpB protein NP805_12560 PF06689 ClpX C4-type zinc finger NP805_12560 PF07724 AAA domain (Cdc48 subfamily) NP805_12565 PF00574 Clp protease NP805_12570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP805_12570 PF05698 Bacterial trigger factor protein (TF) C-terminus NP805_12570 PF05697 Bacterial trigger factor protein (TF) NP805_12585 PF02687 FtsX-like permease family NP805_12585 PF12704 MacB-like periplasmic core domain NP805_12590 PF00005 ABC transporter NP805_12595 PF12704 MacB-like periplasmic core domain NP805_12595 PF02687 FtsX-like permease family NP805_12605 PF00270 DEAD/DEAH box helicase NP805_12605 PF00271 Helicase conserved C-terminal domain NP805_12605 PF03461 TRCF domain NP805_12605 PF02559 CarD-like/TRCF domain NP805_12605 PF17757 UvrB interaction domain NP805_12610 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NP805_12615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP805_12620 PF00892 EamA-like transporter family NP805_12630 PF00300 Histidine phosphatase superfamily (branch 1) NP805_12635 PF05193 Peptidase M16 inactive domain NP805_12635 PF00675 Insulinase (Peptidase family M16) NP805_12635 PF16187 Middle or third domain of peptidase_M16 NP805_12640 PF05724 Thiopurine S-methyltransferase (TPMT) NP805_12655 PF12833 Helix-turn-helix domain NP805_12655 PF02805 Metal binding domain of Ada NP805_12655 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NP805_12655 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NP805_12665 PF13592 Winged helix-turn helix NP805_12665 PF13358 DDE superfamily endonuclease NP805_12680 PF02540 NAD synthase NP805_12680 PF00958 GMP synthase C terminal domain NP805_12680 PF00117 Glutamine amidotransferase class-I NP805_12685 PF00478 IMP dehydrogenase / GMP reductase domain NP805_12685 PF00571 CBS domain NP805_12690 PF13808 DDE_Tnp_1-associated NP805_12690 PF01609 Transposase DDE domain NP805_12695 PF13737 Transposase DDE domain NP805_12700 PF02601 Exonuclease VII, large subunit NP805_12700 PF13742 OB-fold nucleic acid binding domain NP805_12705 PF04055 Radical SAM superfamily NP805_12715 PF00793 DAHP synthetase I family NP805_12720 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NP805_12725 PF00266 Aminotransferase class-V NP805_12730 PF00766 Electron transfer flavoprotein FAD-binding domain NP805_12730 PF01012 Electron transfer flavoprotein domain NP805_12735 PF01012 Electron transfer flavoprotein domain NP805_12745 PF01544 CorA-like Mg2+ transporter protein NP805_12750 PF11143 Protein of unknown function (DUF2919) NP805_12765 PF07715 TonB-dependent Receptor Plug Domain NP805_12765 PF00593 TonB dependent receptor NP805_12770 PF01032 FecCD transport family NP805_12775 PF01032 FecCD transport family NP805_12780 PF00005 ABC transporter NP805_12785 PF01648 4'-phosphopantetheinyl transferase superfamily NP805_12785 PF17837 4'-phosphopantetheinyl transferase N-terminal domain NP805_12790 PF01497 Periplasmic binding protein NP805_12810 PF00550 Phosphopantetheine attachment site NP805_12810 PF00975 Thioesterase domain NP805_12810 PF00668 Condensation domain NP805_12810 PF13193 AMP-binding enzyme C-terminal domain NP805_12810 PF00501 AMP-binding enzyme NP805_12815 PF00550 Phosphopantetheine attachment site NP805_12815 PF00857 Isochorismatase family NP805_12820 PF13193 AMP-binding enzyme C-terminal domain NP805_12820 PF00501 AMP-binding enzyme NP805_12825 PF00425 chorismate binding enzyme NP805_12830 PF07273 Protein of unknown function (DUF1439) NP805_12840 PF00483 Nucleotidyl transferase NP805_12845 PF03707 Bacterial signalling protein N terminal repeat NP805_12845 PF00990 Diguanylate cyclase, GGDEF domain NP805_12845 PF00563 EAL domain NP805_12860 PF17200 Single Cache domain 2 NP805_12860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_12860 PF00672 HAMP domain NP805_12865 PF00294 pfkB family carbohydrate kinase NP805_12870 PF01124 MAPEG family NP805_12875 PF00762 Ferrochelatase NP805_12880 PF05191 Adenylate kinase, active site lid NP805_12885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_12885 PF00183 Hsp90 protein NP805_12890 PF02132 RecR protein NP805_12890 PF13662 Toprim domain NP805_12895 PF02634 FdhD/NarQ family NP805_12900 PF01590 GAF domain NP805_12900 PF00158 Sigma-54 interaction domain NP805_12900 PF02954 Bacterial regulatory protein, Fis family NP805_12915 PF01568 Molydopterin dinucleotide binding domain NP805_12915 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NP805_12915 PF00384 Molybdopterin oxidoreductase NP805_12920 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NP805_12920 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal NP805_12925 PF01609 Transposase DDE domain NP805_12925 PF13808 DDE_Tnp_1-associated NP805_12930 PF00842 Alanine racemase, C-terminal domain NP805_12930 PF01168 Alanine racemase, N-terminal domain NP805_12935 PF00544 Pectate lyase NP805_12940 PF13808 DDE_Tnp_1-associated NP805_12940 PF01609 Transposase DDE domain NP805_12945 PF13229 Right handed beta helix region NP805_12955 PF13592 Winged helix-turn helix NP805_12955 PF13358 DDE superfamily endonuclease NP805_12965 PF01609 Transposase DDE domain NP805_12965 PF05598 Transposase domain (DUF772) NP805_12975 PF01609 Transposase DDE domain NP805_12975 PF05598 Transposase domain (DUF772) NP805_12980 PF01609 Transposase DDE domain NP805_12980 PF05598 Transposase domain (DUF772) NP805_12985 PF09722 Protein of unknown function (DUF2384) NP805_12995 PF01609 Transposase DDE domain NP805_12995 PF05598 Transposase domain (DUF772) NP805_13010 PF03050 Transposase IS66 family NP805_13010 PF13817 IS66 C-terminal element NP805_13010 PF13007 Transposase C of IS166 homeodomain NP805_13010 PF13005 zinc-finger binding domain of transposase IS66 NP805_13025 PF03432 Relaxase/Mobilisation nuclease domain NP805_13050 PF10722 Putative bacterial sensory transduction regulator NP805_13060 PF00265 Thymidine kinase NP805_13065 PF03553 Na+/H+ antiporter family NP805_13070 PF00816 H-NS histone family NP805_13075 PF01923 Cobalamin adenosyltransferase NP805_13080 PF12843 Putative quorum-sensing-regulated virulence factor NP805_13085 PF04055 Radical SAM superfamily NP805_13090 PF06508 Queuosine biosynthesis protein QueC NP805_13105 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NP805_13110 PF18073 Rubredoxin metal binding domain NP805_13120 PF00216 Bacterial DNA-binding protein NP805_13125 PF00575 S1 RNA binding domain NP805_13130 PF02224 Cytidylate kinase NP805_13135 PF00925 GTP cyclohydrolase II NP805_13140 PF03466 LysR substrate binding domain NP805_13140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_13145 PF03466 LysR substrate binding domain NP805_13145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_13150 PF07690 Major Facilitator Superfamily NP805_13165 PF00881 Nitroreductase family NP805_13170 PF00563 EAL domain NP805_13170 PF00990 Diguanylate cyclase, GGDEF domain NP805_13170 PF03707 Bacterial signalling protein N terminal repeat NP805_13170 PF13188 PAS domain NP805_13180 PF03466 LysR substrate binding domain NP805_13180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_13185 PF00072 Response regulator receiver domain NP805_13195 PF01212 Beta-eliminating lyase NP805_13200 PF00582 Universal stress protein family NP805_13205 PF00689 Cation transporting ATPase, C-terminus NP805_13205 PF00690 Cation transporter/ATPase, N-terminus NP805_13210 PF00106 short chain dehydrogenase NP805_13220 PF00248 Aldo/keto reductase family NP805_13225 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NP805_13235 PF00005 ABC transporter NP805_13240 PF00528 Binding-protein-dependent transport system inner membrane component NP805_13245 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP805_13250 PF00528 Binding-protein-dependent transport system inner membrane component NP805_13255 PF03411 Penicillin-insensitive murein endopeptidase NP805_13265 PF04536 TPM domain NP805_13280 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NP805_13285 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NP805_13290 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NP805_13290 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NP805_13300 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NP805_13300 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NP805_13305 PF00384 Molybdopterin oxidoreductase NP805_13305 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NP805_13305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NP805_13310 PF00146 NADH dehydrogenase NP805_13315 PF12838 4Fe-4S dicluster domain NP805_13320 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NP805_13325 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NP805_13330 PF00361 Proton-conducting membrane transporter NP805_13330 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NP805_13335 PF00361 Proton-conducting membrane transporter NP805_13340 PF00361 Proton-conducting membrane transporter NP805_13355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_13355 PF00672 HAMP domain NP805_13360 PF07549 SecD/SecF GG Motif NP805_13360 PF02355 Protein export membrane protein NP805_13365 PF02355 Protein export membrane protein NP805_13365 PF13721 SecD export protein N-terminal TM region NP805_13365 PF07549 SecD/SecF GG Motif NP805_13400 PF01230 HIT domain NP805_13405 PF00672 HAMP domain NP805_13405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_13415 PF01979 Amidohydrolase family NP805_13430 PF00375 Sodium:dicarboxylate symporter family NP805_13440 PF00842 Alanine racemase, C-terminal domain NP805_13440 PF01168 Alanine racemase, N-terminal domain NP805_13445 PF03741 Integral membrane protein TerC family NP805_13450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP805_13450 PF00005 ABC transporter NP805_13455 PF00005 ABC transporter NP805_13455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP805_13460 PF00528 Binding-protein-dependent transport system inner membrane component NP805_13460 PF12911 N-terminal TM domain of oligopeptide transport permease C NP805_13465 PF00528 Binding-protein-dependent transport system inner membrane component NP805_13470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP805_13475 PF01914 MarC family integral membrane protein NP805_13485 PF00171 Aldehyde dehydrogenase family NP805_13485 PF00465 Iron-containing alcohol dehydrogenase NP805_13490 PF01966 HD domain NP805_13495 PF07694 5TMR of 5TMR-LYT NP805_13495 PF06580 Histidine kinase NP805_13500 PF04397 LytTr DNA-binding domain NP805_13500 PF00072 Response regulator receiver domain NP805_13505 PF02554 Carbon starvation protein CstA NP805_13510 PF11742 Protein of unknown function (DUF3302) NP805_13515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP805_13515 PF00529 HlyD membrane-fusion protein of T1SS NP805_13520 PF04851 Type III restriction enzyme, res subunit NP805_13520 PF00271 Helicase conserved C-terminal domain NP805_13525 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NP805_13530 PF00462 Glutaredoxin NP805_13540 PF00155 Aminotransferase class I and II NP805_13545 PF03606 C4-dicarboxylate anaerobic carrier NP805_13550 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NP805_13550 PF07055 Enoyl reductase FAD binding domain NP805_13550 PF12241 Trans-2-enoyl-CoA reductase catalytic region NP805_13555 PF08447 PAS fold NP805_13555 PF13426 PAS domain NP805_13555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_13650 PF10124 Mu-like prophage major head subunit gpT NP805_13655 PF10123 Mu-like prophage I protein NP805_13675 PF06074 Protein of unknown function (DUF935) NP805_13680 PF03237 Terminase-like family NP805_13685 PF11985 Protein of unknown function (DUF3486) NP805_13690 PF08461 Ribonuclease R winged-helix domain NP805_13795 PF01381 Helix-turn-helix NP805_13795 PF00717 Peptidase S24-like NP805_13815 PF00892 EamA-like transporter family NP805_13820 PF02508 Rnf-Nqr subunit, membrane protein NP805_13825 PF04060 Putative Fe-S cluster NP805_13830 PF10531 SLBB domain NP805_13830 PF13375 RnfC Barrel sandwich hybrid domain NP805_13830 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NP805_13830 PF12838 4Fe-4S dicluster domain NP805_13835 PF03116 NQR2, RnfD, RnfE family NP805_13840 PF04205 FMN-binding domain NP805_13845 PF02508 Rnf-Nqr subunit, membrane protein NP805_13850 PF10576 Iron-sulfur binding domain of endonuclease III NP805_13850 PF00633 Helix-hairpin-helix motif NP805_13850 PF00730 HhH-GPD superfamily base excision DNA repair protein NP805_13855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NP805_13860 PF18393 MotY N-terminal domain NP805_13860 PF00691 OmpA family NP805_13865 PF00672 HAMP domain NP805_13865 PF12729 Four helix bundle sensory module for signal transduction NP805_13865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_13870 PF00929 Exonuclease NP805_13875 PF13726 Na+-H+ antiporter family NP805_13875 PF03553 Na+/H+ antiporter family NP805_13880 PF00528 Binding-protein-dependent transport system inner membrane component NP805_13890 PF00005 ABC transporter NP805_13895 PF00270 DEAD/DEAH box helicase NP805_13895 PF00271 Helicase conserved C-terminal domain NP805_13895 PF03880 DbpA RNA binding domain NP805_13900 PF03061 Thioesterase superfamily NP805_13910 PF02913 FAD linked oxidases, C-terminal domain NP805_13910 PF01565 FAD binding domain NP805_13910 PF13183 4Fe-4S dicluster domain NP805_13920 PF03471 Transporter associated domain NP805_13920 PF03741 Integral membrane protein TerC family NP805_13925 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NP805_13930 PF00962 Adenosine/AMP deaminase NP805_13935 PF13344 Haloacid dehalogenase-like hydrolase NP805_13955 PF00733 Asparagine synthase NP805_13955 PF13537 Glutamine amidotransferase domain NP805_13965 PF14497 Glutathione S-transferase, C-terminal domain NP805_13965 PF02798 Glutathione S-transferase, N-terminal domain NP805_13975 PF04209 homogentisate 1,2-dioxygenase NP805_13980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NP805_13990 PF00849 RNA pseudouridylate synthase NP805_13995 PF00990 Diguanylate cyclase, GGDEF domain NP805_13995 PF13426 PAS domain NP805_13995 PF00563 EAL domain NP805_14000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_14000 PF08447 PAS fold NP805_14005 PF00589 Phage integrase family NP805_14005 PF13356 Arm DNA-binding domain NP805_14010 PF03459 TOBE domain NP805_14010 PF00005 ABC transporter NP805_14030 PF00816 H-NS histone family NP805_14040 PF13148 Protein of unknown function (DUF3987) NP805_14090 PF04002 RadC-like JAB domain NP805_14175 PF00271 Helicase conserved C-terminal domain NP805_14175 PF00176 SNF2 family N-terminal domain NP805_14185 PF01027 Inhibitor of apoptosis-promoting Bax1 NP805_14190 PF12805 FUSC-like inner membrane protein yccS NP805_14195 PF04358 DsrC like protein NP805_14200 PF05036 Sporulation related domain NP805_14205 PF08245 Mur ligase middle domain NP805_14205 PF02875 Mur ligase family, glutamate ligase domain NP805_14210 PF17848 Acetyl-coA carboxylase zinc finger domain NP805_14210 PF01039 Carboxyl transferase domain NP805_14215 PF01416 tRNA pseudouridine synthase NP805_14225 PF01118 Semialdehyde dehydrogenase, NAD binding domain NP805_14225 PF02774 Semialdehyde dehydrogenase, dimerisation domain NP805_14230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NP805_14230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NP805_14230 PF11890 Domain of unknown function (DUF3410) NP805_14235 PF01569 PAP2 superfamily NP805_14265 PF00082 Subtilase family NP805_14265 PF01483 Proprotein convertase P-domain NP805_14275 PF01915 Glycosyl hydrolase family 3 C-terminal domain NP805_14275 PF00933 Glycosyl hydrolase family 3 N terminal domain NP805_14275 PF14310 Fibronectin type III-like domain NP805_14285 PF00391 PEP-utilising enzyme, mobile domain NP805_14285 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NP805_14285 PF02896 PEP-utilising enzyme, TIM barrel domain NP805_14290 PF03618 Kinase/pyrophosphorylase NP805_14300 PF00324 Amino acid permease NP805_14340 PF03412 Peptidase C39 family NP805_14340 PF00005 ABC transporter NP805_14340 PF00664 ABC transporter transmembrane region NP805_14345 PF16199 Radical_SAM C-terminal domain NP805_14345 PF04055 Radical SAM superfamily NP805_14350 PF01645 Conserved region in glutamate synthase NP805_14350 PF01493 GXGXG motif NP805_14350 PF00310 Glutamine amidotransferases class-II NP805_14350 PF04898 Glutamate synthase central domain NP805_14355 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NP805_14355 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP805_14370 PF00376 MerR family regulatory protein NP805_14370 PF09278 MerR, DNA binding NP805_14385 PF14521 Lysine-specific metallo-endopeptidase NP805_14395 PF00270 DEAD/DEAH box helicase NP805_14395 PF00271 Helicase conserved C-terminal domain NP805_14400 PF13302 Acetyltransferase (GNAT) domain NP805_14415 PF08378 Nuclease-related domain NP805_14420 PF03575 Peptidase family S51 NP805_14425 PF01609 Transposase DDE domain NP805_14425 PF05598 Transposase domain (DUF772) NP805_14430 PF03575 Peptidase family S51 NP805_14435 PF07759 Protein of unknown function (DUF1615) NP805_14440 PF00682 HMGL-like NP805_14440 PF08502 LeuA allosteric (dimerisation) domain NP805_14445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NP805_14445 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NP805_14445 PF02142 MGS-like domain NP805_14450 PF00117 Glutamine amidotransferase class-I NP805_14450 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NP805_14455 PF05173 Dihydrodipicolinate reductase, C-terminus NP805_14455 PF01113 Dihydrodipicolinate reductase, N-terminus NP805_14475 PF01812 5-formyltetrahydrofolate cyclo-ligase family NP805_14480 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NP805_14485 PF01842 ACT domain NP805_14485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NP805_14485 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NP805_14490 PF01219 Prokaryotic diacylglycerol kinase NP805_14495 PF00793 DAHP synthetase I family NP805_14500 PF00005 ABC transporter NP805_14505 PF01032 FecCD transport family NP805_14510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_14510 PF00512 His Kinase A (phospho-acceptor) domain NP805_14510 PF01627 Hpt domain NP805_14510 PF00989 PAS fold NP805_14510 PF00072 Response regulator receiver domain NP805_14510 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP805_14520 PF00437 Type II/IV secretion system protein NP805_14525 PF00483 Nucleotidyl transferase NP805_14540 PF07664 Ferrous iron transport protein B C terminus NP805_14540 PF02421 Ferrous iron transport protein B NP805_14540 PF07670 Nucleoside recognition NP805_14550 PF01253 Translation initiation factor SUI1 NP805_14555 PF01169 Uncharacterized protein family UPF0016 NP805_14585 PF13185 GAF domain NP805_14585 PF00990 Diguanylate cyclase, GGDEF domain NP805_14595 PF13737 Transposase DDE domain NP805_14605 PF13358 DDE superfamily endonuclease NP805_14605 PF13592 Winged helix-turn helix NP805_14620 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system NP805_14635 PF01406 tRNA synthetases class I (C) catalytic domain NP805_14635 PF09190 DALR domain NP805_14640 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NP805_14650 PF00149 Calcineurin-like phosphoesterase NP805_14655 PF04226 Transglycosylase associated protein NP805_14670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_14670 PF03466 LysR substrate binding domain NP805_14690 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system NP805_14695 PF02661 Fic/DOC family NP805_14695 PF13784 Fic/DOC family N-terminal NP805_14705 PF01609 Transposase DDE domain NP805_14705 PF05598 Transposase domain (DUF772) NP805_14710 PF01609 Transposase DDE domain NP805_14710 PF05598 Transposase domain (DUF772) NP805_14715 PF04984 Phage tail sheath protein subtilisin-like domain NP805_14715 PF17482 Phage tail sheath C-terminal domain NP805_14795 PF14659 Phage integrase, N-terminal SAM-like domain NP805_14795 PF00589 Phage integrase family NP805_14815 PF01066 CDP-alcohol phosphatidyltransferase NP805_14820 PF02151 UvrB/uvrC motif NP805_14820 PF08459 UvrC Helix-hairpin-helix N-terminal NP805_14820 PF01541 GIY-YIG catalytic domain NP805_14825 PF00196 Bacterial regulatory proteins, luxR family NP805_14825 PF00072 Response regulator receiver domain NP805_14830 PF02348 Cytidylyltransferase NP805_14835 PF03966 Trm112p-like protein NP805_14840 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NP805_14845 PF00005 ABC transporter NP805_14845 PF00664 ABC transporter transmembrane region NP805_14850 PF03772 Competence protein NP805_14850 PF00753 Metallo-beta-lactamase superfamily NP805_14865 PF05872 Bacterial protein of unknown function (DUF853) NP805_14870 PF00155 Aminotransferase class I and II NP805_14880 PF13609 Gram-negative porin NP805_14885 PF06733 DEAD_2 NP805_14885 PF13307 Helicase C-terminal domain NP805_14900 PF00850 Histone deacetylase domain NP805_14910 PF01926 50S ribosome-binding GTPase NP805_14915 PF00245 Alkaline phosphatase NP805_14920 PF00245 Alkaline phosphatase NP805_14935 PF14760 Rnk N-terminus NP805_14935 PF01272 Transcription elongation factor, GreA/GreB, C-term NP805_14940 PF00072 Response regulator receiver domain NP805_14940 PF00196 Bacterial regulatory proteins, luxR family NP805_14945 PF07730 Histidine kinase NP805_14945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_14945 PF05231 MASE1 NP805_14950 PF07690 Major Facilitator Superfamily NP805_14955 PF00990 Diguanylate cyclase, GGDEF domain NP805_14955 PF08448 PAS fold NP805_14960 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP805_14965 PF00528 Binding-protein-dependent transport system inner membrane component NP805_14970 PF00005 ABC transporter NP805_14975 PF04116 Fatty acid hydroxylase superfamily NP805_14980 PF13520 Amino acid permease NP805_14995 PF00571 CBS domain NP805_14995 PF01595 Cyclin M transmembrane N-terminal domain NP805_14995 PF03471 Transporter associated domain NP805_15000 PF01895 PhoU domain NP805_15005 PF00005 ABC transporter NP805_15010 PF00528 Binding-protein-dependent transport system inner membrane component NP805_15015 PF00528 Binding-protein-dependent transport system inner membrane component NP805_15020 PF14437 MafB19-like deaminase NP805_15040 PF01274 Malate synthase NP805_15045 PF00463 Isocitrate lyase family NP805_15050 PF01609 Transposase DDE domain NP805_15050 PF13006 Insertion element 4 transposase N-terminal NP805_15055 PF00308 Bacterial dnaA protein NP805_15070 PF02769 AIR synthase related protein, C-terminal domain NP805_15070 PF00586 AIR synthase related protein, N-terminal domain NP805_15075 PF00551 Formyl transferase NP805_15080 PF01784 NIF3 (NGG1p interacting factor 3) NP805_15085 PF00158 Sigma-54 interaction domain NP805_15085 PF00072 Response regulator receiver domain NP805_15085 PF02954 Bacterial regulatory protein, Fis family NP805_15090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_15090 PF00512 His Kinase A (phospho-acceptor) domain NP805_15090 PF13188 PAS domain NP805_15095 PF06490 Flagellar regulatory protein FleQ NP805_15095 PF02954 Bacterial regulatory protein, Fis family NP805_15095 PF00158 Sigma-54 interaction domain NP805_15110 PF02503 Polyphosphate kinase middle domain NP805_15110 PF13090 Polyphosphate kinase C-terminal domain 2 NP805_15110 PF17941 Polyphosphate kinase C-terminal domain 1 NP805_15110 PF13089 Polyphosphate kinase N-terminal domain NP805_15115 PF02541 Ppx/GppA phosphatase family NP805_15120 PF01769 Divalent cation transporter NP805_15120 PF00571 CBS domain NP805_15120 PF03448 MgtE intracellular N domain NP805_15125 PF12323 Helix-turn-helix domain NP805_15140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NP805_15140 PF07196 Flagellin hook IN motif NP805_15145 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NP805_15145 PF10135 Rod binding protein NP805_15150 PF02119 Flagellar P-ring protein NP805_15155 PF02107 Flagellar L-ring protein NP805_15160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NP805_15160 PF00460 Flagella basal body rod protein NP805_15165 PF00460 Flagella basal body rod protein NP805_15165 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NP805_15170 PF00460 Flagella basal body rod protein NP805_15170 PF07559 Flagellar basal body protein FlaE NP805_15170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NP805_15180 PF00460 Flagella basal body rod protein NP805_15180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NP805_15185 PF00460 Flagella basal body rod protein NP805_15190 PF01739 CheR methyltransferase, SAM binding domain NP805_15190 PF03705 CheR methyltransferase, all-alpha domain NP805_15195 PF01584 CheW-like domain NP805_15195 PF00072 Response regulator receiver domain NP805_15215 PF12850 Calcineurin-like phosphoesterase superfamily domain NP805_15220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP805_15230 PF01479 S4 domain NP805_15230 PF00849 RNA pseudouridylate synthase NP805_15235 PF11871 Domain of unknown function (DUF3391) NP805_15235 PF01966 HD domain NP805_15245 PF00892 EamA-like transporter family NP805_15250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP805_15275 PF00313 'Cold-shock' DNA-binding domain NP805_15280 PF00364 Biotin-requiring enzyme NP805_15280 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NP805_15280 PF02817 e3 binding domain NP805_15285 PF02779 Transketolase, pyrimidine binding domain NP805_15285 PF02780 Transketolase, C-terminal domain NP805_15290 PF00676 Dehydrogenase E1 component NP805_15295 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NP805_15305 PF05472 DNA replication terminus site-binding protein (Ter protein) NP805_15315 PF00176 SNF2 family N-terminal domain NP805_15315 PF04434 SWIM zinc finger NP805_15315 PF00271 Helicase conserved C-terminal domain NP805_15320 PF04337 Protein of unknown function, DUF480 NP805_15330 PF02397 Bacterial sugar transferase NP805_15340 PF13439 Glycosyltransferase Family 4 NP805_15340 PF00534 Glycosyl transferases group 1 NP805_15345 PF00535 Glycosyl transferase family 2 NP805_15355 PF02719 Polysaccharide biosynthesis protein NP805_15360 PF00953 Glycosyl transferase family 4 NP805_15365 PF01370 NAD dependent epimerase/dehydratase family NP805_15375 PF01757 Acyltransferase family NP805_15385 PF00005 ABC transporter NP805_15405 PF00263 Bacterial type II and III secretion system protein NP805_15405 PF03958 Bacterial type II/III secretion system short domain NP805_15440 PF07963 Prokaryotic N-terminal methylation motif NP805_15445 PF08334 Type II secretion system (T2SS), protein G NP805_15445 PF07963 Prokaryotic N-terminal methylation motif NP805_15450 PF00482 Type II secretion system (T2SS), protein F NP805_15455 PF00437 Type II/IV secretion system protein NP805_15465 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NP805_15470 PF00483 Nucleotidyl transferase NP805_15475 PF04321 RmlD substrate binding domain NP805_15480 PF16363 GDP-mannose 4,6 dehydratase NP805_15485 PF02321 Outer membrane efflux protein NP805_15490 PF00873 AcrB/AcrD/AcrF family NP805_15495 PF00529 HlyD membrane-fusion protein of T1SS NP805_15495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP805_15500 PF08361 MAATS-type transcriptional repressor, C-terminal region NP805_15500 PF00440 Bacterial regulatory proteins, tetR family NP805_15515 PF13006 Insertion element 4 transposase N-terminal NP805_15515 PF01609 Transposase DDE domain NP805_15525 PF00849 RNA pseudouridylate synthase NP805_15525 PF01479 S4 domain NP805_15530 PF04079 Segregation and condensation complex subunit ScpB NP805_15535 PF02616 Segregation and condensation protein ScpA NP805_15540 PF01300 Telomere recombination NP805_15545 PF02811 PHP domain NP805_15555 PF00425 chorismate binding enzyme NP805_15555 PF04715 Anthranilate synthase component I, N terminal region NP805_15560 PF00117 Glutamine amidotransferase class-I NP805_15560 PF02885 Glycosyl transferase family, helical bundle domain NP805_15560 PF00591 Glycosyl transferase family, a/b domain NP805_15565 PF02885 Glycosyl transferase family, helical bundle domain NP805_15565 PF00591 Glycosyl transferase family, a/b domain NP805_15570 PF00218 Indole-3-glycerol phosphate synthase NP805_15570 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NP805_15575 PF00291 Pyridoxal-phosphate dependent enzyme NP805_15580 PF00290 Tryptophan synthase alpha chain NP805_15585 PF01609 Transposase DDE domain NP805_15585 PF05598 Transposase domain (DUF772) NP805_15595 PF00210 Ferritin-like domain NP805_15620 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NP805_15620 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NP805_15620 PF02378 Phosphotransferase system, EIIC NP805_15625 PF07690 Major Facilitator Superfamily NP805_15630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NP805_15640 PF00849 RNA pseudouridylate synthase NP805_15645 PF00293 NUDIX domain NP805_15655 PF04356 Protein of unknown function (DUF489) NP805_15660 PF08328 Adenylosuccinate lyase C-terminal NP805_15660 PF00206 Lyase NP805_15665 PF08007 Cupin superfamily protein NP805_15670 PF13508 Acetyltransferase (GNAT) domain NP805_15680 PF13417 Glutathione S-transferase, N-terminal domain NP805_15685 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NP805_15685 PF01243 Pyridoxamine 5'-phosphate oxidase NP805_15700 PF01029 NusB family NP805_15700 PF01189 16S rRNA methyltransferase RsmB/F NP805_15705 PF00462 Glutaredoxin NP805_15710 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NP805_15710 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NP805_15715 PF04333 MlaA lipoprotein NP805_15720 PF03918 Cytochrome C biogenesis protein NP805_15725 PF03918 Cytochrome C biogenesis protein NP805_15730 PF08534 Redoxin NP805_15735 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NP805_15735 PF01578 Cytochrome C assembly protein NP805_15740 PF03100 CcmE NP805_15745 PF04995 Heme exporter protein D (CcmD) NP805_15750 PF01578 Cytochrome C assembly protein NP805_15755 PF03379 CcmB protein NP805_15760 PF00005 ABC transporter NP805_15775 PF01584 CheW-like domain NP805_15785 PF13614 AAA domain NP805_15790 PF00691 OmpA family NP805_15790 PF13677 Membrane MotB of proton-channel complex MotA/MotB NP805_15795 PF01618 MotA/TolQ/ExbB proton channel family NP805_15800 PF01339 CheB methylesterase NP805_15800 PF00072 Response regulator receiver domain NP805_15805 PF01627 Hpt domain NP805_15805 PF01584 CheW-like domain NP805_15805 PF02895 Signal transducing histidine kinase, homodimeric domain NP805_15805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_15805 PF00072 Response regulator receiver domain NP805_15810 PF04344 Chemotaxis phosphatase, CheZ NP805_15815 PF00072 Response regulator receiver domain NP805_15820 PF04545 Sigma-70, region 4 NP805_15820 PF04539 Sigma-70 region 3 NP805_15820 PF04542 Sigma-70 region 2 NP805_15825 PF10609 NUBPL iron-transfer P-loop NTPase NP805_15830 PF00448 SRP54-type protein, GTPase domain NP805_15835 PF00771 FHIPEP family NP805_15840 PF01312 FlhB HrpN YscU SpaS Family NP805_15845 PF01311 Bacterial export proteins, family 1 NP805_15850 PF01313 Bacterial export proteins, family 3 NP805_15855 PF00813 FliP family NP805_15860 PF04347 Flagellar biosynthesis protein, FliO NP805_15865 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NP805_15870 PF02154 Flagellar motor switch protein FliM NP805_15870 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NP805_15890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NP805_15890 PF18269 T3SS EscN ATPase C-terminal domain NP805_15900 PF01706 FliG C-terminal domain NP805_15900 PF14841 FliG middle domain NP805_15900 PF14842 FliG N-terminal domain NP805_15905 PF08345 Flagellar M-ring protein C-terminal NP805_15905 PF01514 Secretory protein of YscJ/FliF family NP805_15910 PF02049 Flagellar hook-basal body complex protein FliE NP805_15920 PF07969 Amidohydrolase family NP805_15925 PF01609 Transposase DDE domain NP805_15925 PF13006 Insertion element 4 transposase N-terminal NP805_15940 PF02001 Protein of unknown function DUF134 NP805_15955 PF00072 Response regulator receiver domain NP805_15965 PF02371 Transposase IS116/IS110/IS902 family NP805_15965 PF01548 Transposase NP805_16010 PF00072 Response regulator receiver domain NP805_16010 PF00486 Transcriptional regulatory protein, C terminal NP805_16020 PF02685 Glucokinase NP805_16025 PF12323 Helix-turn-helix domain NP805_16030 PF01418 Helix-turn-helix domain, rpiR family NP805_16030 PF01380 SIS domain NP805_16035 PF02887 Pyruvate kinase, alpha/beta domain NP805_16035 PF00224 Pyruvate kinase, barrel domain NP805_16045 PF00873 AcrB/AcrD/AcrF family NP805_16050 PF01609 Transposase DDE domain NP805_16050 PF13808 DDE_Tnp_1-associated NP805_16055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NP805_16055 PF02770 Acyl-CoA dehydrogenase, middle domain NP805_16055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NP805_16055 PF09317 Domain of unknown function (DUF1974) NP805_16060 PF00440 Bacterial regulatory proteins, tetR family NP805_16110 PF02796 Helix-turn-helix domain of resolvase NP805_16110 PF00239 Resolvase, N terminal domain NP805_16135 PF13808 DDE_Tnp_1-associated NP805_16135 PF01609 Transposase DDE domain NP805_16175 PF05154 TM2 domain NP805_16185 PF03781 Sulfatase-modifying factor enzyme 1 NP805_16195 PF00005 ABC transporter NP805_16225 PF02342 TerD domain NP805_16270 PF04002 RadC-like JAB domain NP805_16300 PF00872 Transposase, Mutator family NP805_16310 PF00872 Transposase, Mutator family NP805_16340 PF17969 L,D-transpeptidase C-terminal domain NP805_16340 PF03734 L,D-transpeptidase catalytic domain NP805_16340 PF01476 LysM domain NP805_16350 PF01575 MaoC like domain NP805_16355 PF05971 RNA methyltransferase NP805_16360 PF00877 NlpC/P60 family NP805_16365 PF01648 4'-phosphopantetheinyl transferase superfamily NP805_16380 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NP805_16385 PF00551 Formyl transferase NP805_16385 PF01842 ACT domain NP805_16395 PF13396 Phospholipase_D-nuclease N-terminal NP805_16395 PF13091 PLD-like domain NP805_16410 PF01551 Peptidase family M23 NP805_16415 PF00128 Alpha amylase, catalytic domain NP805_16420 PF10145 Phage-related minor tail protein NP805_16420 PF01551 Peptidase family M23 NP805_16420 PF01464 Transglycosylase SLT domain NP805_16425 PF00230 Major intrinsic protein NP805_16430 PF02075 Crossover junction endodeoxyribonuclease RuvC NP805_16435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NP805_16440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_16440 PF03466 LysR substrate binding domain NP805_16465 PF01548 Transposase NP805_16465 PF02371 Transposase IS116/IS110/IS902 family NP805_16495 PF13737 Transposase DDE domain NP805_16510 PF13006 Insertion element 4 transposase N-terminal NP805_16510 PF01609 Transposase DDE domain NP805_16515 PF11842 Domain of unknown function (DUF3362) NP805_16515 PF04055 Radical SAM superfamily NP805_16515 PF08497 Radical SAM N-terminal NP805_16525 PF00873 AcrB/AcrD/AcrF family NP805_16530 PF13533 Biotin-lipoyl like NP805_16535 PF00990 Diguanylate cyclase, GGDEF domain NP805_16535 PF05230 MASE2 domain NP805_16540 PF01734 Patatin-like phospholipase NP805_16560 PF00691 OmpA family NP805_16560 PF01389 OmpA-like transmembrane domain NP805_16565 PF00691 OmpA family NP805_16565 PF01389 OmpA-like transmembrane domain NP805_16570 PF00691 OmpA family NP805_16570 PF01389 OmpA-like transmembrane domain NP805_16575 PF00390 Malic enzyme, N-terminal domain NP805_16575 PF03949 Malic enzyme, NAD binding domain NP805_16580 PF12833 Helix-turn-helix domain NP805_16585 PF01554 MatE NP805_16590 PF10692 Protein of unknown function (DUF2498) NP805_16595 PF00990 Diguanylate cyclase, GGDEF domain NP805_16595 PF00072 Response regulator receiver domain NP805_16610 PF01235 Sodium:alanine symporter family NP805_16615 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NP805_16615 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NP805_16620 PF01699 Sodium/calcium exchanger protein NP805_16625 PF08534 Redoxin NP805_16625 PF00462 Glutaredoxin NP805_16635 PF00293 NUDIX domain NP805_16655 PF00005 ABC transporter NP805_16660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP805_16660 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NP805_16675 PF03932 CutC family NP805_16680 PF00480 ROK family NP805_16690 PF01435 Peptidase family M48 NP805_16695 PF12849 PBP superfamily domain NP805_16700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_16700 PF00512 His Kinase A (phospho-acceptor) domain NP805_16700 PF00989 PAS fold NP805_16700 PF11808 Phosphate regulon sensor protein PhoR NP805_16705 PF00486 Transcriptional regulatory protein, C terminal NP805_16705 PF00072 Response regulator receiver domain NP805_16710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NP805_16715 PF00990 Diguanylate cyclase, GGDEF domain NP805_16715 PF07694 5TMR of 5TMR-LYT NP805_16720 PF02954 Bacterial regulatory protein, Fis family NP805_16720 PF00158 Sigma-54 interaction domain NP805_16720 PF01590 GAF domain NP805_16725 PF00171 Aldehyde dehydrogenase family NP805_16735 PF00892 EamA-like transporter family NP805_16750 PF13005 zinc-finger binding domain of transposase IS66 NP805_16750 PF13007 Transposase C of IS166 homeodomain NP805_16750 PF13817 IS66 C-terminal element NP805_16750 PF03050 Transposase IS66 family NP805_16760 PF00248 Aldo/keto reductase family NP805_16770 PF12431 Transcriptional regulator NP805_16770 PF00072 Response regulator receiver domain NP805_16775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_16775 PF17203 Single cache domain 3 NP805_16775 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NP805_16775 PF00989 PAS fold NP805_16780 PF00390 Malic enzyme, N-terminal domain NP805_16780 PF03949 Malic enzyme, NAD binding domain NP805_16785 PF03390 2-hydroxycarboxylate transporter family NP805_16795 PF01047 MarR family NP805_16800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP805_16800 PF00529 HlyD membrane-fusion protein of T1SS NP805_16820 PF01679 Proteolipid membrane potential modulator NP805_16830 PF13597 Anaerobic ribonucleoside-triphosphate reductase NP805_16830 PF03477 ATP cone domain NP805_16840 PF12826 Helix-hairpin-helix motif NP805_16840 PF00533 BRCA1 C Terminus (BRCT) domain NP805_16840 PF01653 NAD-dependent DNA ligase adenylation domain NP805_16840 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NP805_16840 PF03120 NAD-dependent DNA ligase OB-fold domain NP805_16845 PF04354 ZipA, C-terminal FtsZ-binding domain NP805_16850 PF02463 RecF/RecN/SMC N terminal domain NP805_16850 PF06470 SMC proteins Flexible Hinge Domain NP805_16860 PF03458 UPF0126 domain NP805_16870 PF05951 Bacterial protein of unknown function (DUF882) NP805_16875 PF01471 Putative peptidoglycan binding domain NP805_16875 PF03734 L,D-transpeptidase catalytic domain NP805_16890 PF00535 Glycosyl transferase family 2 NP805_16905 PF00579 tRNA synthetases class I (W and Y) NP805_16910 PF01551 Peptidase family M23 NP805_16910 PF01476 LysM domain NP805_16910 PF08525 Opacity-associated protein A N-terminal motif NP805_16915 PF03702 Anhydro-N-acetylmuramic acid kinase NP805_16920 PF05598 Transposase domain (DUF772) NP805_16920 PF01609 Transposase DDE domain NP805_16925 PF13358 DDE superfamily endonuclease NP805_16925 PF13592 Winged helix-turn helix NP805_16930 PF01042 Endoribonuclease L-PSP NP805_16940 PF00456 Transketolase, thiamine diphosphate binding domain NP805_16940 PF02779 Transketolase, pyrimidine binding domain NP805_16940 PF02780 Transketolase, C-terminal domain NP805_16945 PF00438 S-adenosylmethionine synthetase, N-terminal domain NP805_16945 PF02772 S-adenosylmethionine synthetase, central domain NP805_16945 PF02773 S-adenosylmethionine synthetase, C-terminal domain NP805_16950 PF17283 SprT-like zinc ribbon domain NP805_16950 PF10263 SprT-like family NP805_16955 PF04231 Endonuclease I NP805_16960 PF04452 RNA methyltransferase NP805_16965 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NP805_16965 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NP805_16970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_16970 PF00672 HAMP domain NP805_16970 PF12729 Four helix bundle sensory module for signal transduction NP805_16975 PF02622 Uncharacterized ACR, COG1678 NP805_16980 PF03652 Holliday junction resolvase NP805_16985 PF00144 Beta-lactamase NP805_16990 PF17863 AAA lid domain NP805_16990 PF07726 ATPase family associated with various cellular activities (AAA) NP805_17000 PF01841 Transglutaminase-like superfamily NP805_17000 PF13559 Domain of unknown function (DUF4129) NP805_17000 PF11992 Domain of unknown function (DUF3488) NP805_17005 PF01235 Sodium:alanine symporter family NP805_17010 PF00923 Transaldolase/Fructose-6-phosphate aldolase NP805_17025 PF03167 Uracil DNA glycosylase superfamily NP805_17030 PF01228 Glycine radical NP805_17040 PF00793 DAHP synthetase I family NP805_17045 PF13369 Transglutaminase-like superfamily NP805_17055 PF13847 Methyltransferase domain NP805_17055 PF17827 PrmC N-terminal domain NP805_17060 PF03462 PCRF domain NP805_17060 PF00472 RF-1 domain NP805_17065 PF01488 Shikimate / quinate 5-dehydrogenase NP805_17065 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NP805_17065 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NP805_17070 PF03550 Outer membrane lipoprotein LolB NP805_17075 PF08544 GHMP kinases C terminal NP805_17075 PF00288 GHMP kinases N terminal domain NP805_17085 PF14572 Phosphoribosyl synthetase-associated domain NP805_17085 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NP805_17090 PF00149 Calcineurin-like phosphoesterase NP805_17090 PF02872 5'-nucleotidase, C-terminal domain NP805_17095 PF01195 Peptidyl-tRNA hydrolase NP805_17100 PF01926 50S ribosome-binding GTPase NP805_17100 PF06071 Protein of unknown function (DUF933) NP805_17145 PF02080 TrkA-C domain NP805_17145 PF03600 Citrate transporter NP805_17150 PF04973 Nicotinamide mononucleotide transporter NP805_17155 PF01048 Phosphorylase superfamily NP805_17165 PF04266 ASCH domain NP805_17175 PF00128 Alpha amylase, catalytic domain NP805_17175 PF16657 Maltogenic Amylase, C-terminal domain NP805_17185 PF12848 ABC transporter NP805_17185 PF00005 ABC transporter NP805_17190 PF07690 Major Facilitator Superfamily NP805_17195 PF10371 Domain of unknown function NP805_17195 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NP805_17195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NP805_17195 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NP805_17195 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NP805_17200 PF07690 Major Facilitator Superfamily NP805_17205 PF13419 Haloacid dehalogenase-like hydrolase NP805_17215 PF00171 Aldehyde dehydrogenase family NP805_17220 PF04958 Arginine N-succinyltransferase beta subunit NP805_17225 PF00202 Aminotransferase class-III NP805_17230 PF00117 Glutamine amidotransferase class-I NP805_17240 PF00579 tRNA synthetases class I (W and Y) NP805_17245 PF13419 Haloacid dehalogenase-like hydrolase NP805_17250 PF00834 Ribulose-phosphate 3 epimerase family NP805_17255 PF02086 D12 class N6 adenine-specific DNA methyltransferase NP805_17265 PF01761 3-dehydroquinate synthase NP805_17270 PF01202 Shikimate kinase NP805_17275 PF07660 Secretin and TonB N terminus short domain NP805_17275 PF03958 Bacterial type II/III secretion system short domain NP805_17275 PF00263 Bacterial type II and III secretion system protein NP805_17275 PF11741 AMIN domain NP805_17295 PF11104 Type IV pilus assembly protein PilM; NP805_17300 PF00905 Penicillin binding protein transpeptidase domain NP805_17300 PF00912 Transglycosylase NP805_17300 PF17092 Penicillin-binding protein OB-like domain NP805_17305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_17305 PF03466 LysR substrate binding domain NP805_17310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_17310 PF00672 HAMP domain NP805_17325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_17325 PF03466 LysR substrate binding domain NP805_17340 PF01551 Peptidase family M23 NP805_17340 PF08525 Opacity-associated protein A N-terminal motif NP805_17340 PF01476 LysM domain NP805_17350 PF00924 Mechanosensitive ion channel NP805_17350 PF12795 Mechanosensitive ion channel porin domain NP805_17350 PF12794 Mechanosensitive ion channel inner membrane domain 1 NP805_17355 PF03009 Glycerophosphoryl diester phosphodiesterase family NP805_17360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_17360 PF00672 HAMP domain NP805_17360 PF02743 Cache domain NP805_17365 PF02910 Fumarate reductase flavoprotein C-term NP805_17365 PF00890 FAD binding domain NP805_17370 PF13085 2Fe-2S iron-sulfur cluster binding domain NP805_17370 PF13183 4Fe-4S dicluster domain NP805_17375 PF02300 Fumarate reductase subunit C NP805_17380 PF02313 Fumarate reductase subunit D NP805_17390 PF06224 Winged helix DNA-binding domain NP805_17405 PF00501 AMP-binding enzyme NP805_17425 PF00072 Response regulator receiver domain NP805_17425 PF00486 Transcriptional regulatory protein, C terminal NP805_17430 PF08521 Two-component sensor kinase N-terminal NP805_17430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_17430 PF00512 His Kinase A (phospho-acceptor) domain NP805_17440 PF00478 IMP dehydrogenase / GMP reductase domain NP805_17450 PF01132 Elongation factor P (EF-P) OB domain NP805_17450 PF08207 Elongation factor P (EF-P) KOW-like domain NP805_17450 PF09285 Elongation factor P, C-terminal NP805_17460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NP805_17460 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NP805_17470 PF08448 PAS fold NP805_17470 PF00990 Diguanylate cyclase, GGDEF domain NP805_17480 PF13419 Haloacid dehalogenase-like hydrolase NP805_17490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_17490 PF03466 LysR substrate binding domain NP805_17495 PF05230 MASE2 domain NP805_17495 PF00990 Diguanylate cyclase, GGDEF domain NP805_17500 PF00313 'Cold-shock' DNA-binding domain NP805_17505 PF00857 Isochorismatase family NP805_17510 PF01494 FAD binding domain NP805_17515 PF01938 TRAM domain NP805_17515 PF04055 Radical SAM superfamily NP805_17515 PF00919 Uncharacterized protein family UPF0004 NP805_17520 PF02562 PhoH-like protein NP805_17525 PF02130 Uncharacterized protein family UPF0054 NP805_17530 PF00571 CBS domain NP805_17530 PF03471 Transporter associated domain NP805_17535 PF00795 Carbon-nitrogen hydrolase NP805_17540 PF07295 Zinc-ribbon containing domain NP805_17545 PF00133 tRNA synthetases class I (I, L, M and V) NP805_17545 PF13603 Leucyl-tRNA synthetase, Domain 2 NP805_17545 PF08264 Anticodon-binding domain of tRNA NP805_17565 PF01467 Cytidylyltransferase-like NP805_17575 PF02590 Predicted SPOUT methyltransferase NP805_17580 PF03717 Penicillin-binding Protein dimerisation domain NP805_17580 PF00905 Penicillin binding protein transpeptidase domain NP805_17585 PF01098 Cell cycle protein NP805_17590 PF13406 Transglycosylase SLT domain NP805_17595 PF05036 Sporulation related domain NP805_17595 PF03330 Lytic transglycolase NP805_17600 PF07943 Penicillin-binding protein 5, C-terminal domain NP805_17600 PF00768 D-alanyl-D-alanine carboxypeptidase NP805_17605 PF04359 Protein of unknown function (DUF493) NP805_17610 PF03099 Biotin/lipoate A/B protein ligase family NP805_17615 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NP805_17615 PF04055 Radical SAM superfamily NP805_17625 PF06821 Serine hydrolase NP805_17630 PF02508 Rnf-Nqr subunit, membrane protein NP805_17640 PF17768 RecJ OB domain NP805_17640 PF02272 DHHA1 domain NP805_17640 PF01368 DHH family NP805_17650 PF01741 Large-conductance mechanosensitive channel, MscL NP805_17655 PF02899 Phage integrase, N-terminal SAM-like domain NP805_17655 PF00589 Phage integrase family NP805_17660 PF00258 Flavodoxin NP805_17665 PF01523 Putative modulator of DNA gyrase NP805_17670 PF01523 Putative modulator of DNA gyrase NP805_17680 PF03734 L,D-transpeptidase catalytic domain NP805_17680 PF17969 L,D-transpeptidase C-terminal domain NP805_17685 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NP805_17690 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NP805_17715 PF05598 Transposase domain (DUF772) NP805_17715 PF01609 Transposase DDE domain NP805_17725 PF05598 Transposase domain (DUF772) NP805_17725 PF01609 Transposase DDE domain NP805_17730 PF13737 Transposase DDE domain NP805_17755 PF03575 Peptidase family S51 NP805_17760 PF10415 Fumarase C C-terminus NP805_17760 PF00206 Lyase NP805_17765 PF06476 Protein of unknown function (DUF1090) NP805_17770 PF02635 DsrE/DsrF-like family NP805_17775 PF00990 Diguanylate cyclase, GGDEF domain NP805_17780 PF07690 Major Facilitator Superfamily NP805_17785 PF00013 KH domain NP805_17785 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NP805_17785 PF01138 3' exoribonuclease family, domain 1 NP805_17785 PF03725 3' exoribonuclease family, domain 2 NP805_17785 PF00575 S1 RNA binding domain NP805_17790 PF00312 Ribosomal protein S15 NP805_17795 PF01509 TruB family pseudouridylate synthase (N terminal domain) NP805_17795 PF09157 Pseudouridine synthase II TruB, C-terminal NP805_17795 PF16198 tRNA pseudouridylate synthase B C-terminal domain NP805_17800 PF02033 Ribosome-binding factor A NP805_17805 PF00009 Elongation factor Tu GTP binding domain NP805_17805 PF04760 Translation initiation factor IF-2, N-terminal region NP805_17805 PF11987 Translation-initiation factor 2 NP805_17805 PF08364 Bacterial translation initiation factor IF-2 associated region NP805_17810 PF08529 NusA N-terminal domain NP805_17810 PF00575 S1 RNA binding domain NP805_17810 PF13184 NusA-like KH domain NP805_17815 PF02576 RimP N-terminal domain NP805_17815 PF17384 RimP C-terminal SH3 domain NP805_17830 PF03840 Preprotein translocase SecG subunit NP805_17835 PF00121 Triosephosphate isomerase NP805_17840 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NP805_17840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NP805_17840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NP805_17840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NP805_17845 PF00809 Pterin binding enzyme NP805_17850 PF01434 Peptidase family M41 NP805_17850 PF06480 FtsH Extracellular NP805_17850 PF17862 AAA+ lid domain NP805_17850 PF00004 ATPase family associated with various cellular activities (AAA) NP805_17855 PF01728 FtsJ-like methyltransferase NP805_17860 PF01985 CRS1 / YhbY (CRM) domain NP805_17870 PF01272 Transcription elongation factor, GreA/GreB, C-term NP805_17870 PF03449 Transcription elongation factor, N-terminal NP805_17875 PF05239 PRC-barrel domain NP805_17875 PF09557 Domain of unknown function (DUF2382) NP805_17885 PF13677 Membrane MotB of proton-channel complex MotA/MotB NP805_17885 PF00691 OmpA family NP805_17890 PF01618 MotA/TolQ/ExbB proton channel family NP805_17895 PF02609 Exonuclease VII small subunit NP805_17900 PF00348 Polyprenyl synthetase NP805_17905 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NP805_17905 PF02779 Transketolase, pyrimidine binding domain NP805_17905 PF02780 Transketolase, C-terminal domain NP805_17910 PF00528 Binding-protein-dependent transport system inner membrane component NP805_17910 PF12911 N-terminal TM domain of oligopeptide transport permease C NP805_17915 PF00528 Binding-protein-dependent transport system inner membrane component NP805_17920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP805_17925 PF00005 ABC transporter NP805_17925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP805_17930 PF04608 Phosphatidylglycerophosphatase A NP805_17935 PF02769 AIR synthase related protein, C-terminal domain NP805_17935 PF00586 AIR synthase related protein, N-terminal domain NP805_17940 PF01029 NusB family NP805_17945 PF00885 6,7-dimethyl-8-ribityllumazine synthase NP805_17950 PF00925 GTP cyclohydrolase II NP805_17950 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NP805_17955 PF00677 Lumazine binding domain NP805_17960 PF01872 RibD C-terminal domain NP805_17960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NP805_17965 PF03477 ATP cone domain NP805_17980 PF00464 Serine hydroxymethyltransferase NP805_17990 PF02613 Nitrate reductase delta subunit NP805_18020 PF00501 AMP-binding enzyme NP805_18020 PF16177 Acetyl-coenzyme A synthetase N-terminus NP805_18020 PF13193 AMP-binding enzyme C-terminal domain NP805_18025 PF16177 Acetyl-coenzyme A synthetase N-terminus NP805_18025 PF00501 AMP-binding enzyme NP805_18025 PF13193 AMP-binding enzyme C-terminal domain NP805_18030 PF01220 Dehydroquinase class II NP805_18035 PF00364 Biotin-requiring enzyme NP805_18040 PF02785 Biotin carboxylase C-terminal domain NP805_18040 PF00289 Biotin carboxylase, N-terminal domain NP805_18040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NP805_18045 PF06196 Protein of unknown function (DUF997) NP805_18050 PF00474 Sodium:solute symporter family NP805_18055 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NP805_18055 PF00367 phosphotransferase system, EIIB NP805_18055 PF02378 Phosphotransferase system, EIIC NP805_18060 PF03466 LysR substrate binding domain NP805_18060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_18065 PF08240 Alcohol dehydrogenase GroES-like domain NP805_18065 PF00107 Zinc-binding dehydrogenase NP805_18075 PF14602 Hexapeptide repeat of succinyl-transferase NP805_18075 PF12464 Maltose acetyltransferase NP805_18090 PF00881 Nitroreductase family NP805_18095 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP805_18095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NP805_18100 PF01343 Peptidase family S49 NP805_18120 PF07023 Protein of unknown function (DUF1315) NP805_18125 PF00710 Asparaginase, N-terminal NP805_18125 PF17763 Glutaminase/Asparaginase C-terminal domain NP805_18130 PF03616 Sodium/glutamate symporter NP805_18140 PF00672 HAMP domain NP805_18140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_18140 PF02743 Cache domain NP805_18150 PF00152 tRNA synthetases class II (D, K and N) NP805_18150 PF01336 OB-fold nucleic acid binding domain NP805_18155 PF02567 Phenazine biosynthesis-like protein NP805_18160 PF00667 FAD binding domain NP805_18160 PF00258 Flavodoxin NP805_18160 PF00175 Oxidoreductase NAD-binding domain NP805_18165 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NP805_18165 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NP805_18170 PF01507 Phosphoadenosine phosphosulfate reductase family NP805_18175 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NP805_18180 PF00528 Binding-protein-dependent transport system inner membrane component NP805_18185 PF00005 ABC transporter NP805_18185 PF00571 CBS domain NP805_18195 PF00186 Dihydrofolate reductase NP805_18200 PF12821 Threonine/Serine exporter, ThrE NP805_18210 PF06738 Putative threonine/serine exporter NP805_18220 PF00994 Probable molybdopterin binding domain NP805_18230 PF00109 Beta-ketoacyl synthase, N-terminal domain NP805_18230 PF02801 Beta-ketoacyl synthase, C-terminal domain NP805_18245 PF00109 Beta-ketoacyl synthase, N-terminal domain NP805_18245 PF02801 Beta-ketoacyl synthase, C-terminal domain NP805_18270 PF00221 Aromatic amino acid lyase NP805_18280 PF07977 FabA-like domain NP805_18285 PF13193 AMP-binding enzyme C-terminal domain NP805_18285 PF00501 AMP-binding enzyme NP805_18295 PF00550 Phosphopantetheine attachment site NP805_18300 PF00550 Phosphopantetheine attachment site NP805_18335 PF03150 Di-haem cytochrome c peroxidase NP805_18335 PF00034 Cytochrome c NP805_18340 PF00194 Eukaryotic-type carbonic anhydrase NP805_18345 PF04227 Indigoidine synthase A like protein NP805_18350 PF00294 pfkB family carbohydrate kinase NP805_18360 PF04324 BFD-like [2Fe-2S] binding domain NP805_18360 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NP805_18360 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NP805_18360 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP805_18360 PF13806 Rieske-like [2Fe-2S] domain NP805_18360 PF18267 Rubredoxin NAD+ reductase C-terminal domain NP805_18365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NP805_18365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NP805_18365 PF04324 BFD-like [2Fe-2S] binding domain NP805_18365 PF13806 Rieske-like [2Fe-2S] domain NP805_18365 PF18267 Rubredoxin NAD+ reductase C-terminal domain NP805_18365 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP805_18370 PF00005 ABC transporter NP805_18375 PF00528 Binding-protein-dependent transport system inner membrane component NP805_18380 PF00005 ABC transporter NP805_18390 PF10414 Sirohaem synthase dimerisation region NP805_18390 PF14824 Sirohaem biosynthesis protein central NP805_18390 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NP805_18395 PF04324 BFD-like [2Fe-2S] binding domain NP805_18395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NP805_18395 PF00384 Molybdopterin oxidoreductase NP805_18395 PF01568 Molydopterin dinucleotide binding domain NP805_18410 PF00582 Universal stress protein family NP805_18420 PF00171 Aldehyde dehydrogenase family NP805_18425 PF00696 Amino acid kinase family NP805_18425 PF01472 PUA domain NP805_18430 PF07417 Sigma factor-binding transcriptional regulator Crl NP805_18435 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) NP805_18440 PF00156 Phosphoribosyl transferase domain NP805_18445 PF02899 Phage integrase, N-terminal SAM-like domain NP805_18445 PF00589 Phage integrase family NP805_18455 PF00533 BRCA1 C Terminus (BRCT) domain NP805_18455 PF01653 NAD-dependent DNA ligase adenylation domain NP805_18455 PF03120 NAD-dependent DNA ligase OB-fold domain NP805_18455 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NP805_18455 PF12826 Helix-hairpin-helix motif NP805_18515 PF00145 C-5 cytosine-specific DNA methylase NP805_18675 PF17482 Phage tail sheath C-terminal domain NP805_18675 PF04984 Phage tail sheath protein subtilisin-like domain NP805_18710 PF07687 Peptidase dimerisation domain NP805_18710 PF01546 Peptidase family M20/M25/M40 NP805_18715 PF00005 ABC transporter NP805_18715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP805_18720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NP805_18720 PF00005 ABC transporter NP805_18725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NP805_18730 PF00528 Binding-protein-dependent transport system inner membrane component NP805_18730 PF12911 N-terminal TM domain of oligopeptide transport permease C NP805_18735 PF00528 Binding-protein-dependent transport system inner membrane component NP805_18740 PF07715 TonB-dependent Receptor Plug Domain NP805_18740 PF00593 TonB dependent receptor NP805_18750 PF01618 MotA/TolQ/ExbB proton channel family NP805_18755 PF01618 MotA/TolQ/ExbB proton channel family NP805_18760 PF02472 Biopolymer transport protein ExbD/TolR NP805_18775 PF06483 Chitinase C NP805_18775 PF00704 Glycosyl hydrolases family 18 NP805_18815 PF00749 tRNA synthetases class I (E and Q), catalytic domain NP805_18820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_18820 PF00672 HAMP domain NP805_18830 PF00313 'Cold-shock' DNA-binding domain NP805_18870 PF00929 Exonuclease NP805_18875 PF03193 RsgA GTPase NP805_18880 PF02666 Phosphatidylserine decarboxylase NP805_18885 PF09905 DNA-binding protein VF530 NP805_18905 PF03707 Bacterial signalling protein N terminal repeat NP805_18905 PF00990 Diguanylate cyclase, GGDEF domain NP805_18905 PF00563 EAL domain NP805_18915 PF06877 Regulator of ribonuclease activity B NP805_18920 PF05547 Immune inhibitor A peptidase M6 NP805_18920 PF00801 PKD domain NP805_18940 PF00732 GMC oxidoreductase NP805_18940 PF05199 GMC oxidoreductase NP805_18945 PF00171 Aldehyde dehydrogenase family NP805_18950 PF13977 BetI-type transcriptional repressor, C-terminal NP805_18950 PF00440 Bacterial regulatory proteins, tetR family NP805_18955 PF00561 alpha/beta hydrolase fold NP805_18960 PF00664 ABC transporter transmembrane region NP805_18960 PF00005 ABC transporter NP805_18965 PF06004 Bacterial protein of unknown function (DUF903) NP805_18970 PF00581 Rhodanese-like domain NP805_18975 PF04960 Glutaminase NP805_18980 PF04320 Protein with unknown function (DUF469) NP805_18985 PF02390 Putative methyltransferase NP805_18990 PF01483 Proprotein convertase P-domain NP805_18990 PF04389 Peptidase family M28 NP805_19000 PF00155 Aminotransferase class I and II NP805_19005 PF12792 CSS motif domain associated with EAL NP805_19005 PF00563 EAL domain NP805_19010 PF08338 Domain of unknown function (DUF1731) NP805_19010 PF01370 NAD dependent epimerase/dehydratase family NP805_19020 PF00005 ABC transporter NP805_19025 PF13472 GDSL-like Lipase/Acylhydrolase family NP805_19030 PF00072 Response regulator receiver domain NP805_19030 PF01584 CheW-like domain NP805_19040 PF06826 Predicted Permease Membrane Region NP805_19040 PF02080 TrkA-C domain NP805_19045 PF03006 Haemolysin-III related NP805_19050 PF00282 Pyridoxal-dependent decarboxylase conserved domain NP805_19055 PF04279 Intracellular septation protein A NP805_19060 PF03795 YCII-related domain NP805_19065 PF00459 Inositol monophosphatase family NP805_19075 PF00483 Nucleotidyl transferase NP805_19080 PF00854 POT family NP805_19085 PF00072 Response regulator receiver domain NP805_19095 PF00512 His Kinase A (phospho-acceptor) domain NP805_19095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_19100 PF00939 Sodium:sulfate symporter transmembrane region NP805_19130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NP805_19135 PF02321 Outer membrane efflux protein NP805_19140 PF01207 Dihydrouridine synthase (Dus) NP805_19145 PF02954 Bacterial regulatory protein, Fis family NP805_19155 PF01555 DNA methylase NP805_19170 PF00176 SNF2 family N-terminal domain NP805_19170 PF00271 Helicase conserved C-terminal domain NP805_19175 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A NP805_19220 PF04002 RadC-like JAB domain NP805_19300 PF01810 LysE type translocator NP805_19325 PF01521 Iron-sulphur cluster biosynthesis NP805_19335 PF00654 Voltage gated chloride channel NP805_19340 PF00202 Aminotransferase class-III NP805_19355 PF01569 PAP2 superfamily NP805_19365 PF11849 Domain of unknown function (DUF3369) NP805_19370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_19370 PF03466 LysR substrate binding domain NP805_19375 PF00893 Small Multidrug Resistance protein NP805_19380 PF00893 Small Multidrug Resistance protein NP805_19385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NP805_19390 PF00905 Penicillin binding protein transpeptidase domain NP805_19390 PF14814 Bifunctional transglycosylase second domain NP805_19390 PF00912 Transglycosylase NP805_19395 PF00271 Helicase conserved C-terminal domain NP805_19395 PF00270 DEAD/DEAH box helicase NP805_19395 PF04408 Helicase associated domain (HA2) NP805_19395 PF08482 ATP-dependent helicase C-terminal NP805_19405 PF17746 SfsA N-terminal OB domain NP805_19405 PF03749 Sugar fermentation stimulation protein RE domain NP805_19410 PF01258 Prokaryotic dksA/traR C4-type zinc finger NP805_19415 PF00749 tRNA synthetases class I (E and Q), catalytic domain NP805_19420 PF12626 Polymerase A arginine-rich C-terminus NP805_19420 PF12627 Probable RNA and SrmB- binding site of polymerase A NP805_19420 PF01743 Poly A polymerase head domain NP805_19425 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NP805_19430 PF02548 Ketopantoate hydroxymethyltransferase NP805_19435 PF02569 Pantoate-beta-alanine ligase NP805_19445 PF01061 ABC-2 type transporter NP805_19450 PF00005 ABC transporter NP805_19455 PF00156 Phosphoribosyl transferase domain NP805_19460 PF00440 Bacterial regulatory proteins, tetR family NP805_19465 PF02441 Flavoprotein NP805_19470 PF02875 Mur ligase family, glutamate ligase domain NP805_19470 PF01225 Mur ligase family, catalytic domain NP805_19470 PF08245 Mur ligase middle domain NP805_19475 PF00719 Inorganic pyrophosphatase NP805_19480 PF01208 Uroporphyrinogen decarboxylase (URO-D) NP805_19485 PF00293 NUDIX domain NP805_19485 PF09297 NADH pyrophosphatase zinc ribbon domain NP805_19490 PF00171 Aldehyde dehydrogenase family NP805_19490 PF01619 Proline dehydrogenase NP805_19490 PF14850 DNA-binding domain of Proline dehydrogenase NP805_19490 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NP805_19495 PF08239 Bacterial SH3 domain NP805_19500 PF00027 Cyclic nucleotide-binding domain NP805_19500 PF07885 Ion channel NP805_19510 PF01641 SelR domain NP805_19515 PF00128 Alpha amylase, catalytic domain NP805_19515 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NP805_19520 PF00128 Alpha amylase, catalytic domain NP805_19520 PF02806 Alpha amylase, C-terminal all-beta domain NP805_19520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NP805_19525 PF02446 4-alpha-glucanotransferase NP805_19530 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NP805_19530 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NP805_19535 PF01263 Aldose 1-epimerase NP805_19540 PF02445 Quinolinate synthetase A protein NP805_19545 PF00672 HAMP domain NP805_19545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_19625 PF16331 TolA binding protein trimerisation NP805_19625 PF13174 Tetratricopeptide repeat NP805_19630 PF00691 OmpA family NP805_19635 PF07676 WD40-like Beta Propeller Repeat NP805_19635 PF04052 TolB amino-terminal domain NP805_19645 PF02472 Biopolymer transport protein ExbD/TolR NP805_19650 PF01618 MotA/TolQ/ExbB proton channel family NP805_19655 PF03061 Thioesterase superfamily NP805_19660 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) NP805_19665 PF08173 Membrane bound YbgT-like protein NP805_19670 PF02322 Cytochrome bd terminal oxidase subunit II NP805_19675 PF01654 Cytochrome bd terminal oxidase subunit I NP805_19680 PF05496 Holliday junction DNA helicase RuvB P-loop domain NP805_19680 PF17864 RuvB AAA lid domain NP805_19680 PF05491 RuvB C-terminal winged helix domain NP805_19685 PF07499 RuvA, C-terminal domain NP805_19685 PF01330 RuvA N terminal domain NP805_19690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_19690 PF00672 HAMP domain NP805_19695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NP805_19695 PF04073 Aminoacyl-tRNA editing domain NP805_19695 PF03129 Anticodon binding domain NP805_19705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NP805_19710 PF00583 Acetyltransferase (GNAT) family NP805_19715 PF16658 Class II release factor RF3, C-terminal domain NP805_19715 PF03144 Elongation factor Tu domain 2 NP805_19715 PF00009 Elongation factor Tu GTP binding domain NP805_19720 PF00072 Response regulator receiver domain NP805_19720 PF00990 Diguanylate cyclase, GGDEF domain NP805_19725 PF00563 EAL domain NP805_19725 PF13188 PAS domain NP805_19725 PF03707 Bacterial signalling protein N terminal repeat NP805_19725 PF00990 Diguanylate cyclase, GGDEF domain NP805_19730 PF01037 Lrp/AsnC ligand binding domain NP805_19740 PF05762 VWA domain containing CoxE-like protein NP805_19745 PF07728 AAA domain (dynein-related subfamily) NP805_19745 PF17868 AAA lid domain NP805_19745 PF12592 Protein of unknown function (DUF3763) NP805_19755 PF00583 Acetyltransferase (GNAT) family NP805_19755 PF13673 Acetyltransferase (GNAT) domain NP805_19765 PF00501 AMP-binding enzyme NP805_19775 PF04262 Glutamate-cysteine ligase NP805_19780 PF00675 Insulinase (Peptidase family M16) NP805_19780 PF05193 Peptidase M16 inactive domain NP805_19785 PF09335 SNARE associated Golgi protein NP805_19790 PF00107 Zinc-binding dehydrogenase NP805_19790 PF08240 Alcohol dehydrogenase GroES-like domain NP805_19815 PF00175 Oxidoreductase NAD-binding domain NP805_19815 PF00970 Oxidoreductase FAD-binding domain NP805_19820 PF01281 Ribosomal protein L9, N-terminal domain NP805_19820 PF03948 Ribosomal protein L9, C-terminal domain NP805_19825 PF01084 Ribosomal protein S18 NP805_19830 PF01250 Ribosomal protein S6 NP805_19835 PF01566 Natural resistance-associated macrophage protein NP805_19840 PF02272 DHHA1 domain NP805_19840 PF01411 tRNA synthetases class II (A) NP805_19840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NP805_19855 PF13673 Acetyltransferase (GNAT) domain NP805_19865 PF08032 RNA 2'-O ribose methyltransferase substrate binding NP805_19865 PF00588 SpoU rRNA Methylase family NP805_19870 PF00575 S1 RNA binding domain NP805_19870 PF00773 RNB domain NP805_19870 PF17876 Cold shock domain NP805_19870 PF08206 Ribonuclease B OB domain NP805_19870 PF08461 Ribonuclease R winged-helix domain NP805_19875 PF00990 Diguanylate cyclase, GGDEF domain NP805_19880 PF02664 S-Ribosylhomocysteinase (LuxS) NP805_19890 PF00543 Nitrogen regulatory protein P-II NP805_19895 PF02540 NAD synthase NP805_19895 PF00795 Carbon-nitrogen hydrolase NP805_19925 PF07963 Prokaryotic N-terminal methylation motif NP805_19925 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor NP805_19930 PF05567 Neisseria PilC beta-propeller domain NP805_19940 PF05567 Neisseria PilC beta-propeller domain NP805_19965 PF07963 Prokaryotic N-terminal methylation motif NP805_19965 PF12019 Type II transport protein GspH NP805_19970 PF02401 LytB protein NP805_19975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NP805_19980 PF01252 Signal peptidase (SPase) II NP805_19985 PF08264 Anticodon-binding domain of tRNA NP805_19985 PF00133 tRNA synthetases class I (I, L, M and V) NP805_19985 PF06827 Zinc finger found in FPG and IleRS NP805_19990 PF06574 FAD synthetase NP805_19990 PF01687 Riboflavin kinase NP805_19995 PF03023 Lipid II flippase MurJ NP805_20000 PF01649 Ribosomal protein S20 NP805_20005 PF01022 Bacterial regulatory protein, arsR family NP805_20010 PF03466 LysR substrate binding domain NP805_20010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_20015 PF02899 Phage integrase, N-terminal SAM-like domain NP805_20015 PF00589 Phage integrase family NP805_20030 PF01381 Helix-turn-helix NP805_20180 PF01258 Prokaryotic dksA/traR C4-type zinc finger NP805_20265 PF06965 Na+/H+ antiporter 1 NP805_20270 PF00303 Thymidylate synthase NP805_20275 PF01790 Prolipoprotein diacylglyceryl transferase NP805_20280 PF00391 PEP-utilising enzyme, mobile domain NP805_20280 PF05524 PEP-utilising enzyme, N-terminal NP805_20280 PF01590 GAF domain NP805_20280 PF02896 PEP-utilising enzyme, TIM barrel domain NP805_20285 PF00293 NUDIX domain NP805_20290 PF02976 DNA mismatch repair enzyme MutH NP805_20300 PF01245 Ribosomal protein L19 NP805_20305 PF01746 tRNA (Guanine-1)-methyltransferase NP805_20310 PF05239 PRC-barrel domain NP805_20310 PF01782 RimM N-terminal domain NP805_20315 PF00886 Ribosomal protein S16 NP805_20320 PF02881 SRP54-type protein, helical bundle domain NP805_20320 PF00448 SRP54-type protein, GTPase domain NP805_20320 PF02978 Signal peptide binding domain NP805_20325 PF01578 Cytochrome C assembly protein NP805_20330 PF01595 Cyclin M transmembrane N-terminal domain NP805_20330 PF03471 Transporter associated domain NP805_20330 PF00571 CBS domain NP805_20335 PF02082 Transcriptional regulator NP805_20340 PF00042 Globin NP805_20340 PF00970 Oxidoreductase FAD-binding domain NP805_20340 PF00175 Oxidoreductase NAD-binding domain NP805_20345 PF08238 Sel1 repeat NP805_20350 PF00056 lactate/malate dehydrogenase, NAD binding domain NP805_20350 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NP805_20355 PF00528 Binding-protein-dependent transport system inner membrane component NP805_20375 PF00528 Binding-protein-dependent transport system inner membrane component NP805_20380 PF00497 Bacterial extracellular solute-binding proteins, family 3 NP805_20385 PF00005 ABC transporter NP805_20390 PF02863 Arginine repressor, C-terminal domain NP805_20390 PF01316 Arginine repressor, DNA binding domain NP805_20395 PF04261 Dyp-type peroxidase family NP805_20400 PF08402 TOBE domain NP805_20400 PF00005 ABC transporter NP805_20410 PF13416 Bacterial extracellular solute-binding protein NP805_20415 PF00543 Nitrogen regulatory protein P-II NP805_20420 PF00472 RF-1 domain NP805_20425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NP805_20425 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NP805_20430 PF07662 Na+ dependent nucleoside transporter C-terminus NP805_20430 PF07670 Nucleoside recognition NP805_20430 PF01773 Na+ dependent nucleoside transporter N-terminus NP805_20435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_20435 PF03466 LysR substrate binding domain NP805_20440 PF00255 Glutathione peroxidase NP805_20450 PF02595 Glycerate kinase family NP805_20455 PF02447 GntP family permease NP805_20460 PF13556 PucR C-terminal helix-turn-helix domain NP805_20460 PF17853 GGDEF-like domain NP805_20460 PF05651 Putative sugar diacid recognition NP805_20465 PF06062 Uncharacterised protein family (UPF0231) NP805_20480 PF08447 PAS fold NP805_20480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_20485 PF03372 Endonuclease/Exonuclease/phosphatase family NP805_20495 PF00271 Helicase conserved C-terminal domain NP805_20495 PF00270 DEAD/DEAH box helicase NP805_20505 PF08534 Redoxin NP805_20510 PF00403 Heavy-metal-associated domain NP805_20515 PF11852 Domain of unknown function (DUF3372) NP805_20515 PF03714 Bacterial pullanase-associated domain NP805_20515 PF17967 Pullulanase N2 domain NP805_20515 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NP805_20515 PF18494 Pullulanase Ins domain NP805_20530 PF02583 Metal-sensitive transcriptional repressor NP805_20535 PF00155 Aminotransferase class I and II NP805_20540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_20540 PF03466 LysR substrate binding domain NP805_20550 PF04055 Radical SAM superfamily NP805_20555 PF11230 Protein of unknown function (DUF3029) NP805_20575 PF14685 Tricorn protease PDZ domain NP805_20575 PF14684 Tricorn protease C1 domain NP805_20575 PF03572 Peptidase family S41 NP805_20575 PF07676 WD40-like Beta Propeller Repeat NP805_20590 PF00535 Glycosyl transferase family 2 NP805_20595 PF01522 Polysaccharide deacetylase NP805_20595 PF14883 Hypothetical glycosyl hydrolase family 13 NP805_20620 PF18416 N-acetylglucosamine binding protein domain 2 NP805_20620 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NP805_20625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_20625 PF03466 LysR substrate binding domain NP805_20630 PF00005 ABC transporter NP805_20630 PF12857 TOBE-like domain NP805_20635 PF00528 Binding-protein-dependent transport system inner membrane component NP805_20640 PF00528 Binding-protein-dependent transport system inner membrane component NP805_20655 PF13194 Domain of unknown function (DUF4010) NP805_20660 PF14602 Hexapeptide repeat of succinyl-transferase NP805_20660 PF12464 Maltose acetyltransferase NP805_20690 PF14552 Tautomerase enzyme NP805_20700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_20700 PF03466 LysR substrate binding domain NP805_20705 PF14698 Argininosuccinate lyase C-terminal NP805_20705 PF00206 Lyase NP805_20710 PF00764 Arginosuccinate synthase NP805_20715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NP805_20715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NP805_20720 PF00696 Amino acid kinase family NP805_20725 PF02774 Semialdehyde dehydrogenase, dimerisation domain NP805_20725 PF01118 Semialdehyde dehydrogenase, NAD binding domain NP805_20730 PF07687 Peptidase dimerisation domain NP805_20730 PF01546 Peptidase family M20/M25/M40 NP805_20735 PF00311 Phosphoenolpyruvate carboxylase NP805_20745 PF03960 ArsC family NP805_20750 PF01758 Sodium Bile acid symporter family NP805_20755 PF02374 Anion-transporting ATPase NP805_20760 PF06953 Arsenical resistance operon trans-acting repressor ArsD NP805_20765 PF01022 Bacterial regulatory protein, arsR family NP805_20790 PF12161 HsdM N-terminal domain NP805_20790 PF02384 N-6 DNA Methylase NP805_20795 PF01420 Type I restriction modification DNA specificity domain NP805_20820 PF11867 Domain of unknown function (DUF3387) NP805_20820 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NP805_20820 PF18766 SWI2/SNF2 ATPase NP805_20845 PF05190 MutS family domain IV NP805_20845 PF01624 MutS domain I NP805_20845 PF05192 MutS domain III NP805_20845 PF00488 MutS domain V NP805_20845 PF05188 MutS domain II NP805_20850 PF02028 BCCT, betaine/carnitine/choline family transporter NP805_20865 PF04222 Protein of unknown function (DUF416) NP805_20870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NP805_20875 PF01551 Peptidase family M23 NP805_20875 PF08525 Opacity-associated protein A N-terminal motif NP805_20875 PF01476 LysM domain NP805_20895 PF01297 Zinc-uptake complex component A periplasmic NP805_20900 PF00005 ABC transporter NP805_20905 PF00950 ABC 3 transport family NP805_20910 PF03466 LysR substrate binding domain NP805_20910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_20920 PF03167 Uracil DNA glycosylase superfamily NP805_20925 PF00892 EamA-like transporter family NP805_20935 PF01541 GIY-YIG catalytic domain NP805_20950 PF04012 PspA/IM30 family NP805_20955 PF01553 Acyltransferase NP805_20975 PF00085 Thioredoxin NP805_20980 PF07681 DoxX NP805_20985 PF00684 DnaJ central domain NP805_20985 PF01556 DnaJ C terminal domain NP805_20985 PF00226 DnaJ domain NP805_21025 PF05598 Transposase domain (DUF772) NP805_21025 PF01609 Transposase DDE domain NP805_21035 PF00521 DNA gyrase/topoisomerase IV, subunit A NP805_21035 PF03989 DNA gyrase C-terminal domain, beta-propeller NP805_21040 PF00204 DNA gyrase B NP805_21040 PF00986 DNA gyrase B subunit, carboxyl terminus NP805_21040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_21040 PF01751 Toprim domain NP805_21050 PF00293 NUDIX domain NP805_21055 PF05728 Uncharacterised protein family (UPF0227) NP805_21060 PF00149 Calcineurin-like phosphoesterase NP805_21065 PF06853 Protein of unknown function (DUF1249) NP805_21070 PF00293 NUDIX domain NP805_21075 PF02321 Outer membrane efflux protein NP805_21080 PF01548 Transposase NP805_21080 PF02371 Transposase IS116/IS110/IS902 family NP805_21085 PF01467 Cytidylyltransferase-like NP805_21085 PF00294 pfkB family carbohydrate kinase NP805_21090 PF03279 Bacterial lipid A biosynthesis acyltransferase NP805_21105 PF01865 Protein of unknown function DUF47 NP805_21110 PF01384 Phosphate transporter family NP805_21115 PF01743 Poly A polymerase head domain NP805_21115 PF12627 Probable RNA and SrmB- binding site of polymerase A NP805_21115 PF01966 HD domain NP805_21120 PF13401 AAA domain NP805_21120 PF01471 Putative peptidoglycan binding domain NP805_21125 PF16537 Type II secretion system protein B NP805_21130 PF00633 Helix-hairpin-helix motif NP805_21130 PF00730 HhH-GPD superfamily base excision DNA repair protein NP805_21130 PF14815 NUDIX domain NP805_21130 PF10576 Iron-sulfur binding domain of endonuclease III NP805_21135 PF04362 Bacterial Fe(2+) trafficking NP805_21140 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NP805_21140 PF01464 Transglycosylase SLT domain NP805_21145 PF04076 Bacterial OB fold (BOF) protein NP805_21150 PF00657 GDSL-like Lipase/Acylhydrolase NP805_21160 PF01389 OmpA-like transmembrane domain NP805_21160 PF00691 OmpA family NP805_21165 PF03886 ABC-type transport auxiliary lipoprotein component NP805_21170 PF02470 MlaD protein NP805_21175 PF04403 Paraquat-inducible protein A NP805_21180 PF17209 Hfq protein NP805_21185 PF13419 Haloacid dehalogenase-like hydrolase NP805_21195 PF00990 Diguanylate cyclase, GGDEF domain NP805_21195 PF00563 EAL domain NP805_21195 PF00360 Phytochrome region NP805_21195 PF01590 GAF domain NP805_21200 PF00701 Dihydrodipicolinate synthetase family NP805_21205 PF05175 Methyltransferase small domain NP805_21205 PF08468 Methyltransferase small domain N-terminal NP805_21210 PF00483 Nucleotidyl transferase NP805_21215 PF08323 Starch synthase catalytic domain NP805_21215 PF00534 Glycosyl transferases group 1 NP805_21255 PF03553 Na+/H+ antiporter family NP805_21275 PF12464 Maltose acetyltransferase NP805_21275 PF14602 Hexapeptide repeat of succinyl-transferase NP805_21280 PF11941 Domain of unknown function (DUF3459) NP805_21280 PF00128 Alpha amylase, catalytic domain NP805_21285 PF00367 phosphotransferase system, EIIB NP805_21285 PF02378 Phosphotransferase system, EIIC NP805_21290 PF00356 Bacterial regulatory proteins, lacI family NP805_21305 PF17763 Glutaminase/Asparaginase C-terminal domain NP805_21305 PF00710 Asparaginase, N-terminal NP805_21320 PF02142 MGS-like domain NP805_21330 PF00210 Ferritin-like domain NP805_21345 PF08351 Domain of unknown function (DUF1726) NP805_21345 PF13718 GNAT acetyltransferase 2 NP805_21345 PF05127 Helicase NP805_21345 PF17176 tRNA-binding domain NP805_21350 PF00106 short chain dehydrogenase NP805_21355 PF01584 CheW-like domain NP805_21355 PF00072 Response regulator receiver domain NP805_21365 PF07670 Nucleoside recognition NP805_21400 PF02660 Glycerol-3-phosphate acyltransferase NP805_21405 PF02152 Dihydroneopterin aldolase NP805_21410 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NP805_21420 PF07690 Major Facilitator Superfamily NP805_21425 PF02492 CobW/HypB/UreG, nucleotide-binding domain NP805_21425 PF07683 Cobalamin synthesis protein cobW C-terminal domain NP805_21440 PF00563 EAL domain NP805_21440 PF12792 CSS motif domain associated with EAL NP805_21445 PF11791 Aconitate B N-terminal domain NP805_21445 PF06434 Aconitate hydratase 2 N-terminus NP805_21445 PF00330 Aconitase family (aconitate hydratase) NP805_21455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_21455 PF00672 HAMP domain NP805_21455 PF12729 Four helix bundle sensory module for signal transduction NP805_21460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_21460 PF00672 HAMP domain NP805_21460 PF12729 Four helix bundle sensory module for signal transduction NP805_21470 PF01609 Transposase DDE domain NP805_21470 PF13006 Insertion element 4 transposase N-terminal NP805_21475 PF13426 PAS domain NP805_21475 PF00563 EAL domain NP805_21475 PF08448 PAS fold NP805_21475 PF08447 PAS fold NP805_21475 PF05231 MASE1 NP805_21475 PF00990 Diguanylate cyclase, GGDEF domain NP805_21480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NP805_21480 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP805_21485 PF00364 Biotin-requiring enzyme NP805_21485 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NP805_21485 PF02817 e3 binding domain NP805_21490 PF00456 Transketolase, thiamine diphosphate binding domain NP805_21490 PF17831 Pyruvate dehydrogenase E1 component middle domain NP805_21495 PF07729 FCD domain NP805_21495 PF00392 Bacterial regulatory proteins, gntR family NP805_21500 PF01510 N-acetylmuramoyl-L-alanine amidase NP805_21510 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NP805_21510 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NP805_21515 PF07963 Prokaryotic N-terminal methylation motif NP805_21525 PF00482 Type II secretion system (T2SS), protein F NP805_21530 PF01478 Type IV leader peptidase family NP805_21530 PF06750 Bacterial Peptidase A24 N-terminal domain NP805_21535 PF01121 Dephospho-CoA kinase NP805_21540 PF07072 Cell division protein NP805_21545 PF03884 DNA gyrase inhibitor YacG NP805_21550 PF01609 Transposase DDE domain NP805_21550 PF13006 Insertion element 4 transposase N-terminal NP805_21555 PF00293 NUDIX domain NP805_21560 PF02810 SEC-C motif NP805_21560 PF07517 SecA DEAD-like domain NP805_21560 PF01043 SecA preprotein cross-linking domain NP805_21560 PF07516 SecA Wing and Scaffold domain NP805_21570 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NP805_21575 PF12327 FtsZ family, C-terminal domain NP805_21575 PF00091 Tubulin/FtsZ family, GTPase domain NP805_21580 PF02491 SHS2 domain inserted in FTSA NP805_21585 PF03799 Cell division protein FtsQ NP805_21585 PF08478 POTRA domain, FtsQ-type NP805_21590 PF08245 Mur ligase middle domain NP805_21590 PF01225 Mur ligase family, catalytic domain NP805_21590 PF02875 Mur ligase family, glutamate ligase domain NP805_21595 PF03033 Glycosyltransferase family 28 N-terminal domain NP805_21595 PF04101 Glycosyltransferase family 28 C-terminal domain NP805_21600 PF01098 Cell cycle protein NP805_21605 PF02875 Mur ligase family, glutamate ligase domain NP805_21605 PF08245 Mur ligase middle domain NP805_21610 PF00953 Glycosyl transferase family 4 NP805_21610 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NP805_21615 PF02875 Mur ligase family, glutamate ligase domain NP805_21615 PF01225 Mur ligase family, catalytic domain NP805_21615 PF08245 Mur ligase middle domain NP805_21620 PF08245 Mur ligase middle domain NP805_21620 PF02875 Mur ligase family, glutamate ligase domain NP805_21620 PF01225 Mur ligase family, catalytic domain NP805_21625 PF03717 Penicillin-binding Protein dimerisation domain NP805_21625 PF00905 Penicillin binding protein transpeptidase domain NP805_21630 PF04999 Cell division protein FtsL NP805_21635 PF01795 MraW methylase family NP805_21640 PF02381 MraZ protein, putative antitoxin-like NP805_21650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NP805_21655 PF04348 LppC putative lipoprotein NP805_21660 PF02021 Uncharacterised protein family UPF0102 NP805_21665 PF13580 SIS domain NP805_21670 PF04972 BON domain NP805_21675 PF04386 Stringent starvation protein B NP805_21680 PF02798 Glutathione S-transferase, N-terminal domain NP805_21680 PF00043 Glutathione S-transferase, C-terminal domain NP805_21685 PF02167 Cytochrome C1 family NP805_21690 PF00032 Cytochrome b(C-terminal)/b6/petD NP805_21690 PF00033 Cytochrome b/b6/petB NP805_21695 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NP805_21695 PF00355 Rieske [2Fe-2S] domain NP805_21700 PF00380 Ribosomal protein S9/S16 NP805_21705 PF00572 Ribosomal protein L13 NP805_21710 PF03969 AFG1-like ATPase NP805_21720 PF00595 PDZ domain NP805_21720 PF13180 PDZ domain NP805_21725 PF13180 PDZ domain NP805_21755 PF01979 Amidohydrolase family NP805_21760 PF03841 L-seryl-tRNA selenium transferase NP805_21765 PF07071 KDGP aldolase NP805_21770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NP805_21770 PF02378 Phosphotransferase system, EIIC NP805_21770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NP805_21775 PF00381 PTS HPr component phosphorylation site NP805_21780 PF03668 P-loop ATPase protein family NP805_21785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NP805_21790 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NP805_21795 PF04552 Sigma-54, DNA binding domain NP805_21795 PF04963 Sigma-54 factor, core binding domain NP805_21795 PF00309 Sigma-54 factor, Activator interacting domain (AID) NP805_21800 PF12399 Branched-chain amino acid ATP-binding cassette transporter NP805_21800 PF00005 ABC transporter NP805_21805 PF03968 OstA-like protein NP805_21810 PF06835 Lipopolysaccharide-assembly, LptC-related NP805_21820 PF00571 CBS domain NP805_21820 PF01380 SIS domain NP805_21825 PF00005 ABC transporter NP805_21830 PF02405 Permease MlaE NP805_21835 PF02470 MlaD protein NP805_21840 PF05494 MlaC protein NP805_21850 PF01722 BolA-like protein NP805_21855 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NP805_21860 PF01523 Putative modulator of DNA gyrase NP805_21865 PF04751 Protein of unknown function (DUF615) NP805_21875 PF04363 Protein of unknown function (DUF496) NP805_21905 PF01381 Helix-turn-helix NP805_21905 PF07883 Cupin domain NP805_21910 PF03594 Benzoate membrane transport protein NP805_21920 PF02219 Methylenetetrahydrofolate reductase NP805_21935 PF12729 Four helix bundle sensory module for signal transduction NP805_21935 PF00672 HAMP domain NP805_21935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_21940 PF03922 OmpW family NP805_21945 PF08448 PAS fold NP805_21945 PF00990 Diguanylate cyclase, GGDEF domain NP805_21950 PF00005 ABC transporter NP805_21950 PF17755 UvrA DNA-binding domain NP805_21950 PF17760 UvrA interaction domain NP805_21955 PF00196 Bacterial regulatory proteins, luxR family NP805_21960 PF00436 Single-strand binding protein family NP805_21970 PF05598 Transposase domain (DUF772) NP805_21970 PF01609 Transposase DDE domain NP805_21990 PF13538 UvrD-like helicase C-terminal domain NP805_21990 PF14490 Helix-hairpin-helix containing domain NP805_21990 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain NP805_22005 PF07690 Major Facilitator Superfamily NP805_22010 PF00440 Bacterial regulatory proteins, tetR family NP805_22010 PF02909 Tetracyclin repressor-like, C-terminal domain NP805_22025 PF01381 Helix-turn-helix NP805_22030 PF13438 Domain of unknown function (DUF4113) NP805_22030 PF00817 impB/mucB/samB family NP805_22030 PF11799 impB/mucB/samB family C-terminal domain NP805_22045 PF01545 Cation efflux family NP805_22045 PF16916 Dimerisation domain of Zinc Transporter NP805_22055 PF00313 'Cold-shock' DNA-binding domain NP805_22060 PF07715 TonB-dependent Receptor Plug Domain NP805_22060 PF00593 TonB dependent receptor NP805_22065 PF00990 Diguanylate cyclase, GGDEF domain NP805_22070 PF00512 His Kinase A (phospho-acceptor) domain NP805_22070 PF00672 HAMP domain NP805_22070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_22075 PF00072 Response regulator receiver domain NP805_22075 PF00486 Transcriptional regulatory protein, C terminal NP805_22095 PF02743 Cache domain NP805_22095 PF00672 HAMP domain NP805_22095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NP805_22105 PF00990 Diguanylate cyclase, GGDEF domain NP805_22110 PF00543 Nitrogen regulatory protein P-II NP805_22115 PF00909 Ammonium Transporter Family NP805_22130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NP805_22140 PF05598 Transposase domain (DUF772) NP805_22140 PF01609 Transposase DDE domain NP805_22150 PF13538 UvrD-like helicase C-terminal domain NP805_22155 PF13361 UvrD-like helicase C-terminal domain NP805_22155 PF12705 PD-(D/E)XK nuclease superfamily NP805_22155 PF00580 UvrD/REP helicase N-terminal domain NP805_22160 PF17946 RecC C-terminal domain NP805_22165 PF07681 DoxX NP805_22170 PF17954 Quercetinase C-terminal cupin domain NP805_22170 PF02678 Pirin NP805_22180 PF03466 LysR substrate binding domain NP805_22180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_22190 PF00392 Bacterial regulatory proteins, gntR family NP805_22190 PF07702 UTRA domain NP805_22205 PF00528 Binding-protein-dependent transport system inner membrane component NP805_22215 PF00005 ABC transporter NP805_22215 PF08402 TOBE domain NP805_22225 PF00990 Diguanylate cyclase, GGDEF domain NP805_22245 PF00583 Acetyltransferase (GNAT) family NP805_22250 PF00199 Catalase NP805_22250 PF06628 Catalase-related immune-responsive NP805_22275 PF01569 PAP2 superfamily NP805_22280 PF01594 AI-2E family transporter NP805_22290 PF02954 Bacterial regulatory protein, Fis family NP805_22290 PF00989 PAS fold NP805_22290 PF00158 Sigma-54 interaction domain NP805_22295 PF00465 Iron-containing alcohol dehydrogenase NP805_22300 PF05524 PEP-utilising enzyme, N-terminal NP805_22300 PF03610 PTS system fructose IIA component NP805_22300 PF00391 PEP-utilising enzyme, mobile domain NP805_22300 PF00381 PTS HPr component phosphorylation site NP805_22305 PF02734 DAK2 domain NP805_22310 PF02733 Dak1 domain NP805_22315 PF00860 Permease family NP805_22360 PF01196 Ribosomal protein L17 NP805_22365 PF01000 RNA polymerase Rpb3/RpoA insert domain NP805_22365 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NP805_22365 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NP805_22370 PF00163 Ribosomal protein S4/S9 N-terminal domain NP805_22370 PF01479 S4 domain NP805_22375 PF00411 Ribosomal protein S11 NP805_22380 PF00416 Ribosomal protein S13/S18 NP805_22385 PF00444 Ribosomal protein L36 NP805_22390 PF00344 SecY translocase NP805_22395 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NP805_22400 PF00327 Ribosomal protein L30p/L7e NP805_22405 PF00333 Ribosomal protein S5, N-terminal domain NP805_22405 PF03719 Ribosomal protein S5, C-terminal domain NP805_22410 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NP805_22415 PF00347 Ribosomal protein L6 NP805_22420 PF00410 Ribosomal protein S8 NP805_22425 PF00253 Ribosomal protein S14p/S29e NP805_22430 PF00673 ribosomal L5P family C-terminus NP805_22430 PF00281 Ribosomal protein L5 NP805_22435 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NP805_22440 PF00238 Ribosomal protein L14p/L23e NP805_22445 PF00366 Ribosomal protein S17 NP805_22450 PF00831 Ribosomal L29 protein NP805_22455 PF00252 Ribosomal protein L16p/L10e NP805_22460 PF00189 Ribosomal protein S3, C-terminal domain NP805_22460 PF07650 KH domain NP805_22465 PF00237 Ribosomal protein L22p/L17e NP805_22470 PF00203 Ribosomal protein S19 NP805_22475 PF03947 Ribosomal Proteins L2, C-terminal domain NP805_22475 PF00181 Ribosomal Proteins L2, RNA binding domain NP805_22480 PF00276 Ribosomal protein L23 NP805_22485 PF00573 Ribosomal protein L4/L1 family NP805_22490 PF00297 Ribosomal protein L3 NP805_22495 PF00338 Ribosomal protein S10p/S20e NP805_22505 PF00512 His Kinase A (phospho-acceptor) domain NP805_22505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_22505 PF00672 HAMP domain NP805_22510 PF00072 Response regulator receiver domain NP805_22510 PF00486 Transcriptional regulatory protein, C terminal NP805_22515 PF03449 Transcription elongation factor, N-terminal NP805_22515 PF01272 Transcription elongation factor, GreA/GreB, C-term NP805_22520 PF17674 HHH domain NP805_22520 PF09371 Tex-like protein N-terminal domain NP805_22520 PF16921 Tex protein YqgF-like domain NP805_22520 PF00575 S1 RNA binding domain NP805_22525 PF13006 Insertion element 4 transposase N-terminal NP805_22525 PF01609 Transposase DDE domain NP805_22545 PF00561 alpha/beta hydrolase fold NP805_22550 PF00156 Phosphoribosyl transferase domain NP805_22555 PF01521 Iron-sulphur cluster biosynthesis NP805_22555 PF01106 NifU-like domain NP805_22560 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NP805_22560 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NP805_22565 PF02556 Preprotein translocase subunit SecB NP805_22570 PF00581 Rhodanese-like domain NP805_22575 PF01676 Metalloenzyme superfamily NP805_22575 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NP805_22580 PF01551 Peptidase family M23 NP805_22590 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NP805_22590 PF00356 Bacterial regulatory proteins, lacI family NP805_22605 PF01081 KDPG and KHG aldolase NP805_22610 PF00920 Dehydratase family NP805_22615 PF01202 Shikimate kinase NP805_22620 PF02447 GntP family permease NP805_22625 PF13091 PLD-like domain NP805_22630 PF00271 Helicase conserved C-terminal domain NP805_22630 PF00270 DEAD/DEAH box helicase NP805_22630 PF17191 RecG wedge domain NP805_22640 PF00583 Acetyltransferase (GNAT) family NP805_22640 PF09500 Putative thioesterase (yiiD_Cterm) NP805_22650 PF02580 D-Tyr-tRNA(Tyr) deacylase NP805_22655 PF03631 Virulence factor BrkB NP805_22660 PF00679 Elongation factor G C-terminus NP805_22660 PF03144 Elongation factor Tu domain 2 NP805_22660 PF00009 Elongation factor Tu GTP binding domain NP805_22665 PF00120 Glutamine synthetase, catalytic domain NP805_22665 PF03951 Glutamine synthetase, beta-Grasp domain NP805_22675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_22675 PF00512 His Kinase A (phospho-acceptor) domain NP805_22675 PF00989 PAS fold NP805_22680 PF02954 Bacterial regulatory protein, Fis family NP805_22680 PF00072 Response regulator receiver domain NP805_22680 PF00158 Sigma-54 interaction domain NP805_22685 PF00962 Adenosine/AMP deaminase NP805_22690 PF04055 Radical SAM superfamily NP805_22690 PF06969 HemN C-terminal domain NP805_22695 PF10675 Protein of unknown function (DUF2489) NP805_22700 PF04220 Der GTPase activator (YihI) NP805_22705 PF00034 Cytochrome c NP805_22710 PF01926 50S ribosome-binding GTPase NP805_22715 PF07369 Protein of unknown function (DUF1488) NP805_22720 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NP805_22720 PF01488 Shikimate / quinate 5-dehydrogenase NP805_22720 PF08501 Shikimate dehydrogenase substrate binding domain NP805_22725 PF01218 Coproporphyrinogen III oxidase NP805_22730 PF01300 Telomere recombination NP805_22735 PF00731 AIR carboxylase NP805_22740 PF01396 Topoisomerase DNA binding C4 zinc finger NP805_22745 PF04361 Protein of unknown function (DUF494) NP805_22750 PF02481 DNA recombination-mediator protein A NP805_22750 PF17782 DprA winged helix domain NP805_22755 PF01476 LysM domain NP805_22760 PF01327 Polypeptide deformylase NP805_22765 PF02911 Formyl transferase, C-terminal domain NP805_22765 PF00551 Formyl transferase NP805_22770 PF01189 16S rRNA methyltransferase RsmB/F NP805_22770 PF01029 NusB family NP805_22775 PF02080 TrkA-C domain NP805_22775 PF02254 TrkA-N domain NP805_22780 PF02386 Cation transport protein NP805_22785 PF02646 RmuC family NP805_22800 PF02082 Transcriptional regulator NP805_22805 PF00294 pfkB family carbohydrate kinase NP805_22810 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NP805_22810 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NP805_22815 PF02540 NAD synthase NP805_22815 PF00117 Glutamine amidotransferase class-I NP805_22815 PF00958 GMP synthase C terminal domain NP805_22820 PF00171 Aldehyde dehydrogenase family NP805_22825 PF00202 Aminotransferase class-III NP805_22830 PF01381 Helix-turn-helix NP805_22835 PF00171 Aldehyde dehydrogenase family NP805_22855 PF00892 EamA-like transporter family NP805_22860 PF12833 Helix-turn-helix domain NP805_22865 PF01810 LysE type translocator NP805_22870 PF00689 Cation transporting ATPase, C-terminus NP805_22870 PF00690 Cation transporter/ATPase, N-terminus NP805_22875 PF04143 Sulphur transport NP805_22880 PF01810 LysE type translocator NP805_22905 PF04972 BON domain NP805_22925 PF05598 Transposase domain (DUF772) NP805_22925 PF01609 Transposase DDE domain NP805_22930 PF00580 UvrD/REP helicase N-terminal domain NP805_22930 PF13361 UvrD-like helicase C-terminal domain NP805_22935 PF02608 ABC transporter substrate-binding protein PnrA-like NP805_22940 PF00005 ABC transporter NP805_22945 PF02653 Branched-chain amino acid transport system / permease component NP805_22950 PF02653 Branched-chain amino acid transport system / permease component NP805_22960 PF03466 LysR substrate binding domain NP805_22960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_22965 PF08240 Alcohol dehydrogenase GroES-like domain NP805_22965 PF00107 Zinc-binding dehydrogenase NP805_22970 PF00756 Putative esterase NP805_22980 PF12867 DinB superfamily NP805_22980 PF03781 Sulfatase-modifying factor enzyme 1 NP805_22985 PF13593 SBF-like CPA transporter family (DUF4137) NP805_22990 PF00356 Bacterial regulatory proteins, lacI family NP805_23030 PF00132 Bacterial transferase hexapeptide (six repeats) NP805_23035 PF01612 3'-5' exonuclease NP805_23035 PF00476 DNA polymerase family A NP805_23035 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NP805_23035 PF01367 5'-3' exonuclease, C-terminal SAM fold NP805_23045 PF06005 Cell division protein ZapB NP805_23055 PF00132 Bacterial transferase hexapeptide (six repeats) NP805_23055 PF06426 Serine acetyltransferase, N-terminal NP805_23060 PF01545 Cation efflux family NP805_23060 PF16916 Dimerisation domain of Zinc Transporter NP805_23065 PF00486 Transcriptional regulatory protein, C terminal NP805_23065 PF00072 Response regulator receiver domain NP805_23070 PF16527 Two-component sensor protein CpxA, periplasmic domain NP805_23070 PF00672 HAMP domain NP805_23070 PF00512 His Kinase A (phospho-acceptor) domain NP805_23070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_23075 PF00588 SpoU rRNA Methylase family NP805_23080 PF01554 MatE NP805_23085 PF02630 SCO1/SenC NP805_23095 PF01726 LexA DNA binding domain NP805_23095 PF00717 Peptidase S24-like NP805_23100 PF01553 Acyltransferase NP805_23105 PF01040 UbiA prenyltransferase family NP805_23110 PF04345 Chorismate lyase NP805_23115 PF03748 Flagellar basal body-associated protein FliL NP805_23135 PF08240 Alcohol dehydrogenase GroES-like domain NP805_23135 PF00107 Zinc-binding dehydrogenase NP805_23140 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NP805_23140 PF00356 Bacterial regulatory proteins, lacI family NP805_23145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NP805_23155 PF03611 PTS system sugar-specific permease component NP805_23160 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NP805_23165 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NP805_23170 PF00535 Glycosyl transferase family 2 NP805_23175 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NP805_23180 PF01467 Cytidylyltransferase-like NP805_23185 PF04393 Protein of unknown function (DUF535) NP805_23190 PF06827 Zinc finger found in FPG and IleRS NP805_23190 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NP805_23190 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NP805_23200 PF00471 Ribosomal protein L33 NP805_23205 PF00830 Ribosomal L28 family NP805_23210 PF04002 RadC-like JAB domain NP805_23215 PF04127 DNA / pantothenate metabolism flavoprotein NP805_23215 PF02441 Flavoprotein NP805_23230 PF01609 Transposase DDE domain NP805_23230 PF05598 Transposase domain (DUF772) NP805_23235 PF00692 dUTPase NP805_23245 PF00440 Bacterial regulatory proteins, tetR family NP805_23250 PF05552 Conserved TM helix NP805_23250 PF00924 Mechanosensitive ion channel NP805_23260 PF00342 Phosphoglucose isomerase NP805_23265 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NP805_23265 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NP805_23270 PF03466 LysR substrate binding domain NP805_23270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NP805_23285 PF00583 Acetyltransferase (GNAT) family NP805_23285 PF13380 CoA binding domain NP805_23285 PF13607 Succinyl-CoA ligase like flavodoxin domain NP805_23310 PF12724 Flavodoxin domain NP805_23315 PF02386 Cation transport protein NP805_23320 PF01205 Uncharacterized protein family UPF0029 NP805_23320 PF09186 Domain of unknown function (DUF1949) NP805_23325 PF00557 Metallopeptidase family M24 NP805_23330 PF13193 AMP-binding enzyme C-terminal domain NP805_23330 PF00501 AMP-binding enzyme NP805_23335 PF00378 Enoyl-CoA hydratase/isomerase NP805_23335 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NP805_23335 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NP805_23340 PF02803 Thiolase, C-terminal domain NP805_23340 PF00108 Thiolase, N-terminal domain NP805_23345 PF00072 Response regulator receiver domain NP805_23345 PF00486 Transcriptional regulatory protein, C terminal NP805_23350 PF00512 His Kinase A (phospho-acceptor) domain NP805_23350 PF00672 HAMP domain NP805_23350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_23360 PF01547 Bacterial extracellular solute-binding protein NP805_23370 PF01206 Sulfurtransferase TusA NP805_23375 PF01042 Endoribonuclease L-PSP NP805_23385 PF00691 OmpA family NP805_23385 PF13488 Glycine zipper NP805_23390 PF03352 Methyladenine glycosylase NP805_23395 PF02091 Glycyl-tRNA synthetase alpha subunit NP805_23400 PF02092 Glycyl-tRNA synthetase beta subunit NP805_23400 PF05746 DALR anticodon binding domain NP805_23420 PF13426 PAS domain NP805_23420 PF00563 EAL domain NP805_23420 PF00990 Diguanylate cyclase, GGDEF domain NP805_23445 PF03222 Tryptophan/tyrosine permease family NP805_23450 PF12801 4Fe-4S binding domain NP805_23460 PF18113 Rubredoxin binding C-terminal domain NP805_23460 PF07992 Pyridine nucleotide-disulphide oxidoreductase NP805_23465 PF00753 Metallo-beta-lactamase superfamily NP805_23465 PF00301 Rubredoxin NP805_23465 PF00258 Flavodoxin NP805_23470 PF00158 Sigma-54 interaction domain NP805_23470 PF01590 GAF domain NP805_23475 PF00392 Bacterial regulatory proteins, gntR family NP805_23475 PF07702 UTRA domain NP805_23485 PF11975 Family 4 glycosyl hydrolase C-terminal domain NP805_23485 PF02056 Family 4 glycosyl hydrolase NP805_23490 PF00356 Bacterial regulatory proteins, lacI family NP805_23495 PF13458 Periplasmic binding protein NP805_23500 PF02653 Branched-chain amino acid transport system / permease component NP805_23505 PF02653 Branched-chain amino acid transport system / permease component NP805_23505 PF11862 Domain of unknown function (DUF3382) NP805_23510 PF00005 ABC transporter NP805_23510 PF12399 Branched-chain amino acid ATP-binding cassette transporter NP805_23515 PF00005 ABC transporter NP805_23525 PF01810 LysE type translocator NP805_23530 PF00581 Rhodanese-like domain NP805_23535 PF01694 Rhomboid family NP805_23535 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease NP805_23540 PF12262 Bacterial virulence factor lipase N-terminal NP805_23545 PF04380 Membrane fusogenic activity NP805_23550 PF00175 Oxidoreductase NAD-binding domain NP805_23555 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NP805_23565 PF07497 Rho termination factor, RNA-binding domain NP805_23565 PF07498 Rho termination factor, N-terminal domain NP805_23565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NP805_23570 PF00085 Thioredoxin NP805_23575 PF00271 Helicase conserved C-terminal domain NP805_23575 PF00270 DEAD/DEAH box helicase NP805_23580 PF02541 Ppx/GppA phosphatase family NP805_23590 PF04445 Putative SAM-dependent methyltransferase NP805_23595 PF03707 Bacterial signalling protein N terminal repeat NP805_23595 PF00990 Diguanylate cyclase, GGDEF domain NP805_23595 PF00563 EAL domain NP805_23600 PF01432 Peptidase family M3 NP805_23605 PF00490 Delta-aminolevulinic acid dehydratase NP805_23610 PF01026 TatD related DNase NP805_23615 PF00902 Sec-independent protein translocase protein (TatC) NP805_23620 PF02416 mttA/Hcf106 family NP805_23625 PF02416 mttA/Hcf106 family NP805_23630 PF03109 ABC1 family NP805_23635 PF02036 SCP-2 sterol transfer family NP805_23640 PF01209 ubiE/COQ5 methyltransferase family NP805_23645 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NP805_23650 PF07969 Amidohydrolase family NP805_23685 PF03544 Gram-negative bacterial TonB protein C-terminal NP805_23690 PF02472 Biopolymer transport protein ExbD/TolR NP805_23695 PF01618 MotA/TolQ/ExbB proton channel family NP805_23700 PF01618 MotA/TolQ/ExbB proton channel family NP805_23710 PF00196 Bacterial regulatory proteins, luxR family NP805_23710 PF03472 Autoinducer binding domain NP805_23715 PF01380 SIS domain NP805_23720 PF08220 DeoR-like helix-turn-helix domain NP805_23720 PF00455 DeoR C terminal sensor domain NP805_23725 PF00486 Transcriptional regulatory protein, C terminal NP805_23725 PF00072 Response regulator receiver domain NP805_23730 PF00512 His Kinase A (phospho-acceptor) domain NP805_23730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NP805_23730 PF00672 HAMP domain NP805_23735 PF00905 Penicillin binding protein transpeptidase domain NP805_23740 PF06123 Inner membrane protein CreD NP805_23745 PF00132 Bacterial transferase hexapeptide (six repeats) NP805_23745 PF12804 MobA-like NTP transferase domain NP805_23745 PF14602 Hexapeptide repeat of succinyl-transferase NP805_23750 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NP805_23750 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NP805_23755 PF02874 ATP synthase alpha/beta family, beta-barrel domain NP805_23755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NP805_23760 PF00231 ATP synthase NP805_23765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NP805_23765 PF00306 ATP synthase alpha/beta chain, C terminal domain NP805_23765 PF02874 ATP synthase alpha/beta family, beta-barrel domain NP805_23770 PF00213 ATP synthase delta (OSCP) subunit NP805_23775 PF00430 ATP synthase B/B' CF(0) NP805_23780 PF00137 ATP synthase subunit C NP805_23785 PF00119 ATP synthase A chain NP805_23790 PF03899 ATP synthase I chain NP805_23795 PF02195 ParB-like nuclease domain NP805_23795 PF17762 HTH domain found in ParB protein NP805_23800 PF13614 AAA domain NP805_23805 PF02527 rRNA small subunit methyltransferase G NP805_23810 PF13932 GidA associated domain NP805_23810 PF01134 Glucose inhibited division protein A NP805_23815 PF00258 Flavodoxin NP805_23820 PF07715 TonB-dependent Receptor Plug Domain NP805_23820 PF00593 TonB dependent receptor NP805_23825 PF00005 ABC transporter NP805_23830 PF00005 ABC transporter NP805_23840 PF01497 Periplasmic binding protein NP805_23845 PF01032 FecCD transport family NP805_23850 PF00593 TonB dependent receptor NP805_23850 PF07715 TonB-dependent Receptor Plug Domain NP805_23855 PF01497 Periplasmic binding protein NP805_23860 PF00005 ABC transporter NP805_23865 PF01032 FecCD transport family NP805_23870 PF01032 FecCD transport family NP805_23875 PF00005 ABC transporter NP805_23880 PF08021 Siderophore-interacting FAD-binding domain NP805_23880 PF00005 ABC transporter NP805_23880 PF04954 Siderophore-interacting protein NP805_23880 PF00664 ABC transporter transmembrane region NP805_23890 PF00975 Thioesterase domain NP805_23890 PF00550 Phosphopantetheine attachment site NP805_23890 PF00668 Condensation domain NP805_23890 PF13193 AMP-binding enzyme C-terminal domain NP805_23890 PF00501 AMP-binding enzyme NP805_23895 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NP805_23900 PF00501 AMP-binding enzyme NP805_23900 PF00550 Phosphopantetheine attachment site NP805_23900 PF00668 Condensation domain NP805_23910 PF13358 DDE superfamily endonuclease NP805_23910 PF13592 Winged helix-turn helix NP805_23925 PF00872 Transposase, Mutator family NP805_23935 PF01926 50S ribosome-binding GTPase NP805_23935 PF12631 MnmE helical domain NP805_23935 PF10396 GTP-binding protein TrmE N-terminus NP805_23940 PF02096 60Kd inner membrane protein NP805_23940 PF14849 YidC periplasmic domain NP805_23945 PF01809 Putative membrane protein insertion efficiency factor NP805_23950 PF00825 Ribonuclease P NP805_23955 PF00468 Ribosomal protein L34 NP805_23960 PF00005 ABC transporter NP805_23965 PF00528 Binding-protein-dependent transport system inner membrane component NP805_23970 PF00497 Bacterial extracellular solute-binding proteins, family 3