CE456_00415 SM00857 Resolvase, N terminal domain CE456_00440 SM00857 Resolvase, N terminal domain CE456_00445 SM00052 Putative diguanylate phosphodiesterase CE456_00455 SM00422 helix_turn_helix, mercury resistance CE456_00475 SM00422 helix_turn_helix, mercury resistance CE456_00480 SM00382 ATPases associated with a variety of cellular activities CE456_00490 SM00857 Resolvase, N terminal domain CE456_00505 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CE456_00525 SM00530 Helix-turn-helix XRE-family like proteins CE456_00535 SM00857 Resolvase, N terminal domain CE456_00735 SM00052 Putative diguanylate phosphodiesterase CE456_00815 SM00470 ParB-like nuclease domain CE456_00845 SM00480 DNA polymerase III beta subunit CE456_00850 SM00470 ParB-like nuclease domain CE456_00855 SM00487 DEAD-like helicases superfamily CE456_00880 SM00528 Domain in histone-like proteins of HNS family CE456_00960 SM00020 Trypsin-like serine protease CE456_01125 SM00857 Resolvase, N terminal domain CE456_01145 SM00487 DEAD-like helicases superfamily CE456_01145 SM00490 helicase superfamily c-terminal domain CE456_01175 SM00530 Helix-turn-helix XRE-family like proteins CE456_01425 SM00857 Resolvase, N terminal domain CE456_01465 SM00528 Domain in histone-like proteins of HNS family CE456_01555 SM00857 Resolvase, N terminal domain CE456_01570 SM00382 ATPases associated with a variety of cellular activities CE456_01660 SM00382 ATPases associated with a variety of cellular activities CE456_01740 SM00342 helix_turn_helix, arabinose operon control protein CE456_01825 SM00128 Inositol polyphosphate phosphatase, catalytic domain homologues CE456_01855 SM00857 Resolvase, N terminal domain CE456_01905 SM00507 HNH nucleases CE456_01970 SM00382 ATPases associated with a variety of cellular activities CE456_01970 SM00760 Bacterial dnaA protein helix-turn-helix domain CE456_01975 SM00480 DNA polymerase III beta subunit CE456_01985 SM00387 Histidine kinase-like ATPases CE456_01985 SM00433 TopoisomeraseII CE456_02035 SM00342 helix_turn_helix, arabinose operon control protein CE456_02045 SM00448 cheY-homologous receiver domain CE456_02045 SM00862 Transcriptional regulatory protein, C terminal CE456_02050 SM00387 Histidine kinase-like ATPases CE456_02050 SM00388 His Kinase A (phosphoacceptor) domain CE456_02080 SM00091 PAS domain CE456_02080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_02080 SM00387 Histidine kinase-like ATPases CE456_02120 SM00458 Ricin-type beta-trefoil CE456_02140 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CE456_02140 SM00954 Region found in RelA / SpoT proteins CE456_02145 SM01409 CE456_02145 CE456_02150 SM00072 Guanylate kinase homologues. CE456_02170 SM00267 diguanylate cyclase CE456_02280 SM00091 PAS domain CE456_02290 SM00387 Histidine kinase-like ATPases CE456_02290 SM00388 His Kinase A (phosphoacceptor) domain CE456_02290 SM00448 cheY-homologous receiver domain CE456_02300 SM00387 Histidine kinase-like ATPases CE456_02305 SM00448 cheY-homologous receiver domain CE456_02305 SM00850 LytTr DNA-binding domain CE456_02320 SM01001 AIR carboxylase CE456_02350 SM00360 RNA recognition motif CE456_02375 SM00881 CoA binding domain CE456_02450 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CE456_02450 SM01232 CE456_02450 CE456_02500 SM00354 helix_turn _helix lactose operon repressor CE456_02545 SM00563 Phosphate acyltransferases CE456_02575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_02575 SM00387 Histidine kinase-like ATPases CE456_02575 SM00388 His Kinase A (phosphoacceptor) domain CE456_02580 SM00448 cheY-homologous receiver domain CE456_02580 SM00862 Transcriptional regulatory protein, C terminal CE456_02590 SM00971 Serine acetyltransferase, N-terminal CE456_02615 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CE456_02615 SM00474 3'-5' exonuclease CE456_02615 SM00475 5'-3' exonuclease CE456_02615 SM00482 DNA polymerase A domain CE456_02670 SM00354 helix_turn _helix lactose operon repressor CE456_02695 SM00829 Enoylreductase CE456_02715 SM00382 ATPases associated with a variety of cellular activities CE456_02795 SM00382 ATPases associated with a variety of cellular activities CE456_02795 SM01086 C-terminal, D2-small domain, of ClpB protein CE456_02810 SM00836 DALR anticodon binding domain CE456_02810 SM01016 Arginyl tRNA synthetase N terminal dom CE456_02815 SM00464 Found in ATP-dependent protease La (LON) CE456_02860 SM00354 helix_turn _helix lactose operon repressor CE456_02865 SM01038 Beta galactosidase small chain CE456_02875 SM00382 ATPases associated with a variety of cellular activities CE456_02885 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_02885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_02960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_02960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_02980 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CE456_02980 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CE456_03020 SM00363 S4 RNA-binding domain CE456_03030 SM00382 ATPases associated with a variety of cellular activities CE456_03030 SM01086 C-terminal, D2-small domain, of ClpB protein CE456_03040 SM00344 helix_turn_helix ASNC type CE456_03045 SM00062 Bacterial periplasmic substrate-binding proteins CE456_03055 SM00116 Domain in cystathionine beta-synthase and other proteins. CE456_03070 SM00387 Histidine kinase-like ATPases CE456_03070 SM00388 His Kinase A (phosphoacceptor) domain CE456_03080 SM00382 ATPases associated with a variety of cellular activities CE456_03080 SM00448 cheY-homologous receiver domain CE456_03115 SM00448 cheY-homologous receiver domain CE456_03115 SM00862 Transcriptional regulatory protein, C terminal CE456_03120 SM00387 Histidine kinase-like ATPases CE456_03140 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CE456_03140 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CE456_03140 SM00493 CE456_03140 CE456_03195 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CE456_03195 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CE456_03200 SM00649 Ribosomal protein L11/L12 CE456_03225 SM00663 RNA polymerase I subunit A N-terminus CE456_03265 SM00838 Elongation factor G C-terminus CE456_03265 SM00889 Elongation factor G, domain IV CE456_03370 SM00530 Helix-turn-helix XRE-family like proteins CE456_03420 SM01120 CE456_03420 CE456_03435 SM00091 PAS domain CE456_03445 SM00014 Acid phosphatase homologues CE456_03455 SM00062 Bacterial periplasmic substrate-binding proteins CE456_03470 SM01060 CE456_03470 CE456_03480 SM00342 helix_turn_helix, arabinose operon control protein CE456_03480 SM00871 Bacterial transcription activator, effector binding domain CE456_03495 SM00267 diguanylate cyclase CE456_03505 SM00382 ATPases associated with a variety of cellular activities CE456_03535 SM00530 Helix-turn-helix XRE-family like proteins CE456_03595 SM00342 helix_turn_helix, arabinose operon control protein CE456_03620 SM00938 Nitrogen regulatory protein P-II CE456_03625 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CE456_03625 SM00091 PAS domain CE456_03625 SM00267 diguanylate cyclase CE456_03640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_03640 SM00387 Histidine kinase-like ATPases CE456_03640 SM00388 His Kinase A (phosphoacceptor) domain CE456_03645 SM00062 Bacterial periplasmic substrate-binding proteins CE456_03645 SM00267 diguanylate cyclase CE456_03655 SM00357 Cold shock protein domain CE456_03660 SM00267 diguanylate cyclase CE456_03670 SM00421 helix_turn_helix, Lux Regulon CE456_03680 SM00062 Bacterial periplasmic substrate-binding proteins CE456_03720 SM00382 ATPases associated with a variety of cellular activities CE456_03720 SM00448 cheY-homologous receiver domain CE456_03745 SM00382 ATPases associated with a variety of cellular activities CE456_03765 SM00858 CE456_03765 CE456_03965 SM00842 Cell division protein FtsA CE456_03970 SM00864 Tubulin/FtsZ family, GTPase domain CE456_03970 SM00865 Tubulin/FtsZ family, C-terminal domain CE456_03985 SM00957 SecA DEAD-like domain CE456_03985 SM00958 SecA preprotein cross-linking domain CE456_04055 SM00644 CE456_04055 CE456_04060 SM00345 helix_turn_helix gluconate operon transcriptional repressor CE456_04060 SM00895 CE456_04060 CE456_04080 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CE456_04080 SM00267 diguanylate cyclase CE456_04090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_04095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_04095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_04110 SM00052 Putative diguanylate phosphodiesterase CE456_04115 SM00822 CE456_04115 CE456_04140 SM00833 Cobalamin synthesis protein cobW C-terminal domain CE456_04160 SM00905 Dihydroneopterin aldolase CE456_04165 SM01207 CE456_04165 CE456_04265 SM00671 Sel1-like repeats. CE456_04300 SM00873 B3/4 domain CE456_04305 SM00260 Two component signalling adaptor domain CE456_04305 SM00448 cheY-homologous receiver domain CE456_04340 SM00851 MGS-like domain CE456_04355 SM00870 CE456_04355 CE456_04365 SM00354 helix_turn _helix lactose operon repressor CE456_04410 SM00354 helix_turn _helix lactose operon repressor CE456_04420 SM00642 Alpha-amylase domain CE456_04425 SM01266 CE456_04425 CE456_04485 SM01130 CE456_04485 CE456_04530 SM00062 Bacterial periplasmic substrate-binding proteins CE456_04555 SM00478 endonuclease III CE456_04565 SM00382 ATPases associated with a variety of cellular activities CE456_04570 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CE456_04585 SM01118 CE456_04585 CE456_04640 SM00387 Histidine kinase-like ATPases CE456_04640 SM00433 TopoisomeraseII CE456_04645 SM00434 DNA Topoisomerase IV CE456_04705 SM00271 DnaJ molecular chaperone homology domain CE456_04735 SM00563 Phosphate acyltransferases CE456_04770 SM00986 Uracil DNA glycosylase superfamily CE456_04770 SM00987 UreE urease accessory protein, C-terminal domain CE456_04790 SM00382 ATPases associated with a variety of cellular activities CE456_04830 SM00347 helix_turn_helix multiple antibiotic resistance protein CE456_04845 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CE456_04845 SM00534 ATPase domain of DNA mismatch repair MUTS family CE456_04850 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CE456_04860 SM00382 ATPases associated with a variety of cellular activities CE456_04885 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CE456_04900 SM00859 Semialdehyde dehydrogenase, NAD binding domain CE456_04965 SM01266 CE456_04965 CE456_05000 SM00382 ATPases associated with a variety of cellular activities CE456_05025 SM00382 ATPases associated with a variety of cellular activities CE456_05030 SM00062 Bacterial periplasmic substrate-binding proteins CE456_05040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_05040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_05040 SM01049 CE456_05040 CE456_05190 SM00487 DEAD-like helicases superfamily CE456_05190 SM00490 helicase superfamily c-terminal domain CE456_05210 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CE456_05210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_05275 SM00938 Nitrogen regulatory protein P-II CE456_05290 SM00382 ATPases associated with a variety of cellular activities CE456_05305 SM00382 ATPases associated with a variety of cellular activities CE456_05310 SM00062 Bacterial periplasmic substrate-binding proteins CE456_05310 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CE456_05330 SM00671 Sel1-like repeats. CE456_05345 SM01091 Transporter associated domain CE456_05355 SM00382 ATPases associated with a variety of cellular activities CE456_05355 SM00962 SRP54-type protein, GTPase domain CE456_05355 SM00963 SRP54-type protein, helical bundle domain CE456_05385 SM00927 DNA mismatch repair enzyme MutH CE456_05395 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CE456_05425 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CE456_05440 SM00904 Riboflavin kinase CE456_05505 SM00938 Nitrogen regulatory protein P-II CE456_05520 SM00267 diguanylate cyclase CE456_05525 SM00316 Ribosomal protein S1-like RNA-binding domain CE456_05525 SM00357 Cold shock protein domain CE456_05525 SM00955 CE456_05525 CE456_05530 SM00967 RNA 2'-O ribose methyltransferase substrate binding CE456_05610 SM00829 Enoylreductase CE456_05655 SM00382 ATPases associated with a variety of cellular activities CE456_05660 SM00327 von Willebrand factor (vWF) type A domain CE456_05670 SM00344 helix_turn_helix ASNC type CE456_05680 SM00267 diguanylate cyclase CE456_05690 SM00347 helix_turn_helix multiple antibiotic resistance protein CE456_05715 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CE456_05720 SM00382 ATPases associated with a variety of cellular activities CE456_05840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_05840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_05855 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CE456_05865 SM00642 Alpha-amylase domain CE456_05870 SM00642 Alpha-amylase domain CE456_05880 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_05880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_05890 SM00287 Bacterial SH3 domain homologues CE456_05935 SM00382 ATPases associated with a variety of cellular activities CE456_05990 SM00487 DEAD-like helicases superfamily CE456_05990 SM00490 helicase superfamily c-terminal domain CE456_05990 SM00847 Helicase associated domain (HA2) Add an annotation CE456_06020 SM00448 cheY-homologous receiver domain CE456_06020 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CE456_06030 SM00014 Acid phosphatase homologues CE456_06095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_06095 SM00387 Histidine kinase-like ATPases CE456_06095 SM00388 His Kinase A (phosphoacceptor) domain CE456_06100 SM00448 cheY-homologous receiver domain CE456_06100 SM00862 Transcriptional regulatory protein, C terminal CE456_06135 SM00822 CE456_06135 CE456_06170 SM00420 helix_turn_helix, Deoxyribose operon repressor CE456_06170 SM01134 CE456_06170 CE456_06195 SM00829 Enoylreductase CE456_06205 SM00347 helix_turn_helix multiple antibiotic resistance protein CE456_06220 SM00344 helix_turn_helix ASNC type CE456_06285 SM00345 helix_turn_helix gluconate operon transcriptional repressor CE456_06375 SM00382 ATPases associated with a variety of cellular activities CE456_06380 SM00116 Domain in cystathionine beta-synthase and other proteins. CE456_06390 SM00244 prohibitin homologues CE456_06470 SM00382 ATPases associated with a variety of cellular activities CE456_06515 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CE456_06605 SM00838 Elongation factor G C-terminus CE456_06615 SM00358 Double-stranded RNA binding motif CE456_06615 SM00535 Ribonuclease III family CE456_06635 SM00644 CE456_06635 CE456_06645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_06645 SM00387 Histidine kinase-like ATPases CE456_06645 SM00388 His Kinase A (phosphoacceptor) domain CE456_06645 SM00448 cheY-homologous receiver domain CE456_06655 SM00954 Region found in RelA / SpoT proteins CE456_06670 SM01192 CE456_06670 CE456_06670 SM01193 CE456_06670 CE456_06710 SM00257 Lysin motif CE456_06735 SM00400 zinc finger CE456_06735 SM00493 CE456_06735 CE456_06735 SM00766 DNA primase DnaG DnaB-binding CE456_06760 SM00028 Tetratricopeptide repeats CE456_06780 SM01209 CE456_06780 CE456_06780 SM01210 CE456_06780 CE456_06785 SM00798 AICARFT/IMPCHase bienzyme CE456_06785 SM00851 MGS-like domain CE456_06790 SM00422 helix_turn_helix, mercury resistance CE456_06805 SM00729 Elongator protein 3, MiaB family, Radical SAM CE456_06880 SM00883 Chaperonin 10 Kd subunit CE456_06895 SM00052 Putative diguanylate phosphodiesterase CE456_06895 SM00267 diguanylate cyclase CE456_06910 SM00487 DEAD-like helicases superfamily CE456_06910 SM00490 helicase superfamily c-terminal domain CE456_06950 SM00670 Large family of predicted nucleotide-binding domains CE456_06955 SM00382 ATPases associated with a variety of cellular activities CE456_06990 SM01329 CE456_06990 CE456_06995 SM00917 LeuA allosteric (dimerisation) domain CE456_07005 SM00014 Acid phosphatase homologues CE456_07060 SM01130 CE456_07060 CE456_07105 SM00073 Histidine Phosphotransfer domain CE456_07105 SM00091 PAS domain CE456_07105 SM00387 Histidine kinase-like ATPases CE456_07105 SM00388 His Kinase A (phosphoacceptor) domain CE456_07105 SM00448 cheY-homologous receiver domain CE456_07110 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CE456_07125 SM00052 Putative diguanylate phosphodiesterase CE456_07125 SM00448 cheY-homologous receiver domain CE456_07130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_07130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_07135 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CE456_07150 SM00382 ATPases associated with a variety of cellular activities CE456_07150 SM00930 CE456_07150 CE456_07180 SM00257 Lysin motif CE456_07180 SM00646 CE456_07180 CE456_07185 SM00853 MutL C terminal dimerisation domain CE456_07185 SM01340 CE456_07185 CE456_07205 SM00244 prohibitin homologues CE456_07210 SM00244 prohibitin homologues CE456_07275 SM00530 Helix-turn-helix XRE-family like proteins CE456_07290 SM00650 Ribosomal RNA adenine dimethylases CE456_07320 SM00271 DnaJ molecular chaperone homology domain CE456_07335 SM00382 ATPases associated with a variety of cellular activities CE456_07355 SM00382 ATPases associated with a variety of cellular activities CE456_07410 SM00530 Helix-turn-helix XRE-family like proteins CE456_07445 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CE456_07445 SM00495 Chitin-binding domain type 3 CE456_07455 SM00100 Cyclic nucleotide-monophosphate binding domain CE456_07455 SM00419 helix_turn_helix, cAMP Regulatory protein CE456_07525 SM00984 UDP binding domain CE456_07535 SM00267 diguanylate cyclase CE456_07545 SM00260 Two component signalling adaptor domain CE456_07545 SM00448 cheY-homologous receiver domain CE456_07570 SM00320 WD40 repeats CE456_07580 SM00382 ATPases associated with a variety of cellular activities CE456_07580 SM00448 cheY-homologous receiver domain CE456_07605 SM00052 Putative diguanylate phosphodiesterase CE456_07610 SM00978 CE456_07610 CE456_07620 SM00382 ATPases associated with a variety of cellular activities CE456_07630 SM01005 Alanine racemase, C-terminal domain CE456_07645 SM00052 Putative diguanylate phosphodiesterase CE456_07660 SM00062 Bacterial periplasmic substrate-binding proteins CE456_07660 SM00387 Histidine kinase-like ATPases CE456_07660 SM00388 His Kinase A (phosphoacceptor) domain CE456_07660 SM00448 cheY-homologous receiver domain CE456_07695 SM00448 cheY-homologous receiver domain CE456_07725 SM00528 Domain in histone-like proteins of HNS family CE456_07755 SM00382 ATPases associated with a variety of cellular activities CE456_07770 SM01131 CE456_07770 CE456_07795 SM00271 DnaJ molecular chaperone homology domain CE456_07815 SM00640 Glycosyl hydrolases family 32 CE456_07820 SM00354 helix_turn _helix lactose operon repressor CE456_07840 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CE456_07870 SM00091 PAS domain CE456_07870 SM00267 diguanylate cyclase CE456_08030 SM00354 helix_turn _helix lactose operon repressor CE456_08090 SM01329 CE456_08090 CE456_08190 SM00858 CE456_08190 CE456_08210 SM00382 ATPases associated with a variety of cellular activities CE456_08280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_08280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_08370 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CE456_08380 SM00935 Outer membrane protein (OmpH-like) CE456_08410 SM00481 DNA polymerase alpha chain like domain CE456_08420 SM00862 Transcriptional regulatory protein, C terminal CE456_08465 SM00382 ATPases associated with a variety of cellular activities CE456_08480 SM00977 TilS substrate C-terminal domain CE456_08485 SM00267 diguanylate cyclase CE456_08510 SM00421 helix_turn_helix, Lux Regulon CE456_08510 SM00448 cheY-homologous receiver domain CE456_08520 SM00642 Alpha-amylase domain CE456_08535 SM00788 Adenylosuccinate synthetase CE456_08580 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CE456_08580 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CE456_08580 SM00493 CE456_08580 CE456_08590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_08610 SM00382 ATPases associated with a variety of cellular activities CE456_08615 SM00382 ATPases associated with a variety of cellular activities CE456_08665 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CE456_08665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_08670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CE456_08680 SM00852 Probable molybdopterin binding domain CE456_08690 SM00382 ATPases associated with a variety of cellular activities CE456_08710 SM00387 Histidine kinase-like ATPases CE456_08710 SM00388 His Kinase A (phosphoacceptor) domain CE456_08795 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CE456_08815 SM00919 Malic enzyme, NAD binding domain CE456_08815 SM01274 CE456_08815 CE456_08825 SM00062 Bacterial periplasmic substrate-binding proteins CE456_08845 SM00919 Malic enzyme, NAD binding domain CE456_08845 SM01274 CE456_08845 CE456_08850 SM00387 Histidine kinase-like ATPases CE456_08855 SM00448 cheY-homologous receiver domain CE456_08880 SM00342 helix_turn_helix, arabinose operon control protein CE456_08910 SM00382 ATPases associated with a variety of cellular activities CE456_08915 SM00267 diguanylate cyclase CE456_08925 SM00448 cheY-homologous receiver domain CE456_08925 SM00862 Transcriptional regulatory protein, C terminal CE456_08930 SM00387 Histidine kinase-like ATPases CE456_08930 SM00388 His Kinase A (phosphoacceptor) domain CE456_08965 SM00382 ATPases associated with a variety of cellular activities CE456_09025 SM00267 diguanylate cyclase CE456_09040 SM00342 helix_turn_helix, arabinose operon control protein CE456_09045 SM00919 Malic enzyme, NAD binding domain CE456_09045 SM01274 CE456_09045 CE456_09075 SM00530 Helix-turn-helix XRE-family like proteins CE456_09090 SM00267 diguanylate cyclase CE456_09110 SM00729 Elongator protein 3, MiaB family, Radical SAM CE456_09155 SM00642 Alpha-amylase domain CE456_09175 SM00155 Phospholipase D. Active site motifs. CE456_09325 SM00729 Elongator protein 3, MiaB family, Radical SAM CE456_09330 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CE456_09350 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CE456_09415 SM00382 ATPases associated with a variety of cellular activities CE456_09415 SM00962 SRP54-type protein, GTPase domain CE456_09430 SM00448 cheY-homologous receiver domain CE456_09505 SM01081 Putative carbohydrate binding domain CE456_09525 SM00823 Phosphopantetheine attachment site CE456_09580 SM01081 Putative carbohydrate binding domain CE456_09635 SM00347 helix_turn_helix multiple antibiotic resistance protein CE456_09650 SM00382 ATPases associated with a variety of cellular activities CE456_09725 SM00052 Putative diguanylate phosphodiesterase CE456_09725 SM00091 PAS domain CE456_09725 SM00267 diguanylate cyclase CE456_09735 SM00354 helix_turn _helix lactose operon repressor CE456_09760 SM00257 Lysin motif CE456_09765 SM00849 Metallo-beta-lactamase superfamily CE456_09780 SM00479 CE456_09780 CE456_09790 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CE456_09820 SM00897 FIST N domain CE456_09820 SM01204 CE456_09820 CE456_09825 SM00387 Histidine kinase-like ATPases CE456_09825 SM00388 His Kinase A (phosphoacceptor) domain CE456_09825 SM00448 cheY-homologous receiver domain CE456_09830 SM00464 Found in ATP-dependent protease La (LON) CE456_09835 SM00421 helix_turn_helix, Lux Regulon CE456_09835 SM00448 cheY-homologous receiver domain CE456_09840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_09840 SM00387 Histidine kinase-like ATPases CE456_09845 SM00729 Elongator protein 3, MiaB family, Radical SAM CE456_09860 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CE456_09885 SM00852 Probable molybdopterin binding domain CE456_09915 SM00382 ATPases associated with a variety of cellular activities CE456_09950 SM00852 Probable molybdopterin binding domain CE456_09960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_09960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_09980 SM00867 YceI-like domain CE456_09990 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CE456_10000 SM00563 Phosphate acyltransferases CE456_10040 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CE456_10045 SM00363 S4 RNA-binding domain CE456_10065 SM00871 Bacterial transcription activator, effector binding domain CE456_10085 SM00345 helix_turn_helix gluconate operon transcriptional repressor CE456_10170 SM00420 helix_turn_helix, Deoxyribose operon repressor CE456_10170 SM01134 CE456_10170 CE456_10195 SM00830 Chorismate mutase type II CE456_10280 SM00382 ATPases associated with a variety of cellular activities CE456_10335 SM00382 ATPases associated with a variety of cellular activities CE456_10340 SM00062 Bacterial periplasmic substrate-binding proteins CE456_10340 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CE456_10370 SM00052 Putative diguanylate phosphodiesterase CE456_10370 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CE456_10370 SM00091 PAS domain CE456_10370 SM00267 diguanylate cyclase CE456_10375 SM00450 Rhodanese Homology Domain CE456_10395 SM00981 CE456_10395 CE456_10465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_10465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_10500 SM00382 ATPases associated with a variety of cellular activities CE456_10585 SM00116 Domain in cystathionine beta-synthase and other proteins. CE456_10600 SM01323 CE456_10600 CE456_10615 SM00450 Rhodanese Homology Domain CE456_10620 SM00028 Tetratricopeptide repeats CE456_10670 SM00271 DnaJ molecular chaperone homology domain CE456_10695 SM00562 CE456_10695 CE456_10705 SM00028 Tetratricopeptide repeats CE456_10710 SM00530 Helix-turn-helix XRE-family like proteins CE456_10730 SM00564 beta-propeller repeat CE456_10735 SM00382 ATPases associated with a variety of cellular activities CE456_10745 SM00062 Bacterial periplasmic substrate-binding proteins CE456_10750 SM01211 CE456_10750 CE456_10800 SM00729 Elongator protein 3, MiaB family, Radical SAM CE456_10805 SM00382 ATPases associated with a variety of cellular activities CE456_10825 SM00052 Putative diguanylate phosphodiesterase CE456_10825 SM00267 diguanylate cyclase CE456_10835 SM00327 von Willebrand factor (vWF) type A domain CE456_10900 SM00487 DEAD-like helicases superfamily CE456_10900 SM00490 helicase superfamily c-terminal domain CE456_10920 SM00448 cheY-homologous receiver domain CE456_10920 SM00850 LytTr DNA-binding domain CE456_10925 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CE456_10975 SM00382 ATPases associated with a variety of cellular activities CE456_10985 SM00382 ATPases associated with a variety of cellular activities CE456_10995 SM01005 Alanine racemase, C-terminal domain CE456_11030 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_11030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_11080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_11080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_11140 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CE456_11140 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CE456_11145 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CE456_11210 SM00062 Bacterial periplasmic substrate-binding proteins CE456_11210 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CE456_11220 SM00382 ATPases associated with a variety of cellular activities CE456_11230 SM00360 RNA recognition motif CE456_11280 SM00052 Putative diguanylate phosphodiesterase CE456_11280 SM00267 diguanylate cyclase CE456_11325 SM00316 Ribosomal protein S1-like RNA-binding domain CE456_11330 SM00411 bacterial (prokaryotic) histone like domain CE456_11345 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CE456_11355 SM01144 CE456_11355 CE456_11380 SM00528 Domain in histone-like proteins of HNS family CE456_11405 SM01154 CE456_11405 CE456_11425 SM01005 Alanine racemase, C-terminal domain CE456_11490 SM00382 ATPases associated with a variety of cellular activities CE456_11495 SM00382 ATPases associated with a variety of cellular activities CE456_11630 SM00493 CE456_11630 CE456_11635 SM00387 Histidine kinase-like ATPases CE456_11665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_11665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_11665 SM01049 CE456_11665 CE456_11730 SM00823 Phosphopantetheine attachment site CE456_11735 SM00822 CE456_11735 CE456_11740 SM00823 Phosphopantetheine attachment site CE456_11760 SM00382 ATPases associated with a variety of cellular activities CE456_11805 SM00893 Electron transfer flavoprotein domain CE456_11810 SM00893 Electron transfer flavoprotein domain CE456_11830 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_11830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_11835 SM00729 Elongator protein 3, MiaB family, Radical SAM CE456_11885 SM00116 Domain in cystathionine beta-synthase and other proteins. CE456_11885 SM01240 CE456_11885 CE456_11950 SM00855 Phosphoglycerate mutase family CE456_11975 SM00487 DEAD-like helicases superfamily CE456_11975 SM00490 helicase superfamily c-terminal domain CE456_11975 SM00982 CE456_11975 CE456_11975 SM01058 CarD-like/TRCF domain CE456_11990 SM00382 ATPases associated with a variety of cellular activities CE456_12000 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CE456_12025 SM00382 ATPases associated with a variety of cellular activities CE456_12025 SM00994 ClpX C4-type zinc finger CE456_12025 SM01086 C-terminal, D2-small domain, of ClpB protein CE456_12030 SM00382 ATPases associated with a variety of cellular activities CE456_12030 SM00464 Found in ATP-dependent protease La (LON) CE456_12035 SM00411 bacterial (prokaryotic) histone like domain CE456_12045 SM00382 ATPases associated with a variety of cellular activities CE456_12060 SM00479 CE456_12060 CE456_12065 SM00116 Domain in cystathionine beta-synthase and other proteins. CE456_12105 SM00422 helix_turn_helix, mercury resistance CE456_12115 SM00878 Biotin carboxylase C-terminal domain CE456_12115 SM01209 CE456_12115 CE456_12170 SM00822 CE456_12170 CE456_12235 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CE456_12235 SM00091 PAS domain CE456_12235 SM00387 Histidine kinase-like ATPases CE456_12235 SM00388 His Kinase A (phosphoacceptor) domain CE456_12235 SM00448 cheY-homologous receiver domain CE456_12240 SM00091 PAS domain CE456_12245 SM00448 cheY-homologous receiver domain CE456_12245 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CE456_12285 SM00491 CE456_12285 CE456_12310 SM00341 Helicase and RNase D C-terminal CE456_12310 SM00474 3'-5' exonuclease CE456_12340 SM00382 ATPases associated with a variety of cellular activities CE456_12355 SM00421 helix_turn_helix, Lux Regulon CE456_12360 SM00116 Domain in cystathionine beta-synthase and other proteins. CE456_12365 SM00382 ATPases associated with a variety of cellular activities CE456_12365 SM00487 DEAD-like helicases superfamily CE456_12365 SM00490 helicase superfamily c-terminal domain CE456_12365 SM00847 Helicase associated domain (HA2) Add an annotation CE456_12380 SM00849 Metallo-beta-lactamase superfamily CE456_12385 SM00450 Rhodanese Homology Domain CE456_12395 SM00062 Bacterial periplasmic substrate-binding proteins CE456_12405 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CE456_12410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_12450 SM00316 Ribosomal protein S1-like RNA-binding domain CE456_12455 SM00363 S4 RNA-binding domain CE456_12490 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CE456_12495 SM00822 CE456_12495 CE456_12505 SM00825 Beta-ketoacyl synthase CE456_12525 SM00382 ATPases associated with a variety of cellular activities CE456_12615 SM00822 CE456_12615 CE456_12645 SM00530 Helix-turn-helix XRE-family like proteins CE456_12740 SM00382 ATPases associated with a variety of cellular activities CE456_12750 SM00981 CE456_12750 CE456_12795 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CE456_12795 SM00245 tail specific protease CE456_12800 SM00945 ProQ/FINO family CE456_12855 SM00100 Cyclic nucleotide-monophosphate binding domain CE456_12855 SM00419 helix_turn_helix, cAMP Regulatory protein CE456_12910 SM00354 helix_turn _helix lactose operon repressor CE456_12945 SM00062 Bacterial periplasmic substrate-binding proteins CE456_12945 SM00387 Histidine kinase-like ATPases CE456_12945 SM00388 His Kinase A (phosphoacceptor) domain CE456_12945 SM00448 cheY-homologous receiver domain CE456_12950 SM00411 bacterial (prokaryotic) histone like domain CE456_12955 SM00873 B3/4 domain CE456_12955 SM00874 tRNA synthetase B5 domain CE456_12955 SM00896 Ferredoxin-fold anticodon binding domain CE456_12980 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CE456_12990 SM00729 Elongator protein 3, MiaB family, Radical SAM CE456_12995 SM00434 DNA Topoisomerase IV CE456_13025 SM00925 MltA specific insert domain CE456_13050 SM00354 helix_turn _helix lactose operon repressor CE456_13065 SM00953 CE456_13065 CE456_13070 SM00487 DEAD-like helicases superfamily CE456_13070 SM00490 helicase superfamily c-terminal domain CE456_13075 SM00062 Bacterial periplasmic substrate-binding proteins CE456_13090 SM00463 Small MutS-related domain CE456_13095 SM00091 PAS domain CE456_13095 SM00267 diguanylate cyclase CE456_13145 SM00782 PhnA Zinc-Ribbon CE456_13175 SM00327 von Willebrand factor (vWF) type A domain CE456_13180 SM00028 Tetratricopeptide repeats CE456_13210 SM00052 Putative diguanylate phosphodiesterase CE456_13220 SM00422 helix_turn_helix, mercury resistance CE456_13305 SM00347 helix_turn_helix multiple antibiotic resistance protein CE456_13395 SM00486 DNA polymerase type-B family CE456_13415 SM00090 RIO-like kinase CE456_13445 SM00518 AP endonuclease family 2 CE456_13455 SM00822 CE456_13455 CE456_13520 SM00382 ATPases associated with a variety of cellular activities CE456_13535 SM01322 CE456_13535 CE456_13740 SM00342 helix_turn_helix, arabinose operon control protein CE456_13760 SM01144 CE456_13760 CE456_13775 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CE456_13785 SM00487 DEAD-like helicases superfamily CE456_13785 SM00490 helicase superfamily c-terminal domain CE456_13810 SM01118 CE456_13810 CE456_13880 SM00382 ATPases associated with a variety of cellular activities CE456_13890 SM00387 Histidine kinase-like ATPases CE456_13890 SM00388 His Kinase A (phosphoacceptor) domain CE456_13890 SM00448 cheY-homologous receiver domain CE456_13995 SM00487 DEAD-like helicases superfamily CE456_13995 SM00490 helicase superfamily c-terminal domain CE456_14000 SM00763 PrkA AAA domain CE456_14015 SM00345 helix_turn_helix gluconate operon transcriptional repressor CE456_14040 SM00487 DEAD-like helicases superfamily CE456_14040 SM00490 helicase superfamily c-terminal domain CE456_14095 SM00448 cheY-homologous receiver domain CE456_14100 SM00387 Histidine kinase-like ATPases CE456_14110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_14110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_14110 SM01049 CE456_14110 CE456_14215 SM00062 Bacterial periplasmic substrate-binding proteins CE456_14240 SM00342 helix_turn_helix, arabinose operon control protein CE456_14240 SM00871 Bacterial transcription activator, effector binding domain CE456_14245 SM00822 CE456_14245 CE456_14275 SM00859 Semialdehyde dehydrogenase, NAD binding domain CE456_14300 SM00881 CoA binding domain CE456_14315 SM00861 Transketolase, pyrimidine binding domain CE456_14355 SM00825 Beta-ketoacyl synthase CE456_14460 SM00382 ATPases associated with a variety of cellular activities CE456_14475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_14475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_14505 SM00354 helix_turn _helix lactose operon repressor CE456_14535 SM00342 helix_turn_helix, arabinose operon control protein CE456_14545 SM00382 ATPases associated with a variety of cellular activities CE456_14560 SM01007 Class II Aldolase and Adducin N-terminal domain CE456_14585 SM00062 Bacterial periplasmic substrate-binding proteins CE456_14655 SM00267 diguanylate cyclase CE456_14655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_14665 SM00091 PAS domain CE456_14665 SM00382 ATPases associated with a variety of cellular activities CE456_14705 SM00382 ATPases associated with a variety of cellular activities CE456_14725 SM00382 ATPases associated with a variety of cellular activities CE456_14730 SM00382 ATPases associated with a variety of cellular activities CE456_14755 SM00382 ATPases associated with a variety of cellular activities CE456_14765 SM00843 CE456_14765 CE456_14770 SM00344 helix_turn_helix ASNC type CE456_14810 SM00316 Ribosomal protein S1-like RNA-binding domain CE456_14815 SM00382 ATPases associated with a variety of cellular activities CE456_14815 SM01086 C-terminal, D2-small domain, of ClpB protein CE456_14825 SM00357 Cold shock protein domain CE456_14890 SM00382 ATPases associated with a variety of cellular activities CE456_15045 SM00478 endonuclease III CE456_15045 SM00525 CE456_15045 CE456_15060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_15065 SM00479 CE456_15065 CE456_15075 SM00052 Putative diguanylate phosphodiesterase CE456_15075 SM00267 diguanylate cyclase CE456_15085 SM00487 DEAD-like helicases superfamily CE456_15085 SM00490 helicase superfamily c-terminal domain CE456_15110 SM00116 Domain in cystathionine beta-synthase and other proteins. CE456_15110 SM01091 Transporter associated domain CE456_15215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_15265 SM00859 Semialdehyde dehydrogenase, NAD binding domain CE456_15275 SM00014 Acid phosphatase homologues CE456_15330 SM01217 CE456_15330 CE456_15335 SM00342 helix_turn_helix, arabinose operon control protein CE456_15440 SM00382 ATPases associated with a variety of cellular activities CE456_15590 SM00422 helix_turn_helix, mercury resistance CE456_15655 SM00487 DEAD-like helicases superfamily CE456_15655 SM00490 helicase superfamily c-terminal domain CE456_15690 SM00917 LeuA allosteric (dimerisation) domain CE456_15695 SM00851 MGS-like domain CE456_15695 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CE456_15700 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CE456_15745 SM00382 ATPases associated with a variety of cellular activities CE456_15755 SM00062 Bacterial periplasmic substrate-binding proteins CE456_15765 SM00382 ATPases associated with a variety of cellular activities CE456_15790 SM00899 CE456_15790 CE456_15820 SM00062 Bacterial periplasmic substrate-binding proteins CE456_15825 SM00062 Bacterial periplasmic substrate-binding proteins CE456_15830 SM00267 diguanylate cyclase CE456_15855 SM00840 CE456_15855 CE456_15885 SM00822 CE456_15885 CE456_15915 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CE456_15915 SM00465 GIY-YIG type nucleases (URI domain) CE456_15920 SM00421 helix_turn_helix, Lux Regulon CE456_15920 SM00448 cheY-homologous receiver domain CE456_15940 SM00382 ATPases associated with a variety of cellular activities CE456_15945 SM00849 Metallo-beta-lactamase superfamily CE456_16000 SM00491 CE456_16000 CE456_16020 SM00098 Alkaline phosphatase homologues CE456_16025 SM00098 Alkaline phosphatase homologues CE456_16045 SM00421 helix_turn_helix, Lux Regulon CE456_16045 SM00448 cheY-homologous receiver domain CE456_16050 SM00387 Histidine kinase-like ATPases CE456_16060 SM00267 diguanylate cyclase CE456_16065 SM00062 Bacterial periplasmic substrate-binding proteins CE456_16065 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CE456_16075 SM00382 ATPases associated with a variety of cellular activities CE456_16100 SM01091 Transporter associated domain CE456_16110 SM00382 ATPases associated with a variety of cellular activities CE456_16175 SM00382 ATPases associated with a variety of cellular activities CE456_16175 SM00448 cheY-homologous receiver domain CE456_16180 SM00091 PAS domain CE456_16180 SM00387 Histidine kinase-like ATPases CE456_16180 SM00388 His Kinase A (phosphoacceptor) domain CE456_16210 SM00116 Domain in cystathionine beta-synthase and other proteins. CE456_16210 SM00924 MgtE intracellular N domain CE456_16230 SM00047 Lysozyme subfamily 2 CE456_16275 SM00138 Methyltransferase, chemotaxis proteins CE456_16280 SM00260 Two component signalling adaptor domain CE456_16280 SM00448 cheY-homologous receiver domain CE456_16285 SM00858 CE456_16285 CE456_16315 SM00363 S4 RNA-binding domain CE456_16320 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CE456_16375 SM00357 Cold shock protein domain CE456_16400 SM00861 Transketolase, pyrimidine binding domain CE456_16425 SM00487 DEAD-like helicases superfamily CE456_16425 SM00490 helicase superfamily c-terminal domain CE456_16535 SM00382 ATPases associated with a variety of cellular activities CE456_16590 SM00382 ATPases associated with a variety of cellular activities CE456_16655 SM00363 S4 RNA-binding domain CE456_16675 SM00481 DNA polymerase alpha chain like domain CE456_16805 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CE456_16935 SM00382 ATPases associated with a variety of cellular activities CE456_16945 SM00260 Two component signalling adaptor domain CE456_16950 SM00260 Two component signalling adaptor domain CE456_16970 SM00448 cheY-homologous receiver domain CE456_16975 SM00073 Histidine Phosphotransfer domain CE456_16975 SM00260 Two component signalling adaptor domain CE456_16975 SM00387 Histidine kinase-like ATPases CE456_16975 SM01231 CE456_16975 CE456_16990 SM00458 Ricin-type beta-trefoil CE456_17065 SM00890 Domain of unknown function CE456_17085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_17110 SM00729 Elongator protein 3, MiaB family, Radical SAM CE456_17110 SM00876 Biotin and Thiamin Synthesis associated domain CE456_17120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_17175 SM01091 Transporter associated domain CE456_17250 SM00028 Tetratricopeptide repeats CE456_17255 SM00267 diguanylate cyclase CE456_17265 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CE456_17265 SM00475 5'-3' exonuclease CE456_17270 SM01329 CE456_17270 CE456_17300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_17300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_17340 SM00900 CE456_17340 CE456_17425 SM01068 Putative carbohydrate binding domain CE456_17515 SM00422 helix_turn_helix, mercury resistance CE456_17550 SM00830 Chorismate mutase type II CE456_17620 SM00463 Small MutS-related domain CE456_17635 SM00342 helix_turn_helix, arabinose operon control protein CE456_17635 SM00478 endonuclease III CE456_17635 SM01009 AlkA N-terminal domain CE456_17685 SM00448 cheY-homologous receiver domain CE456_17700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_17700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_17705 SM00260 Two component signalling adaptor domain CE456_17710 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_17710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_17715 SM00138 Methyltransferase, chemotaxis proteins CE456_17745 SM00342 helix_turn_helix, arabinose operon control protein CE456_17760 SM00530 Helix-turn-helix XRE-family like proteins CE456_17880 SM00448 cheY-homologous receiver domain CE456_17880 SM00862 Transcriptional regulatory protein, C terminal CE456_17895 SM00382 ATPases associated with a variety of cellular activities CE456_17900 SM00382 ATPases associated with a variety of cellular activities CE456_17935 SM00382 ATPases associated with a variety of cellular activities CE456_17960 SM00267 diguanylate cyclase CE456_18060 SM00347 helix_turn_helix multiple antibiotic resistance protein CE456_18075 SM00062 Bacterial periplasmic substrate-binding proteins CE456_18110 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CE456_18110 SM00292 breast cancer carboxy-terminal domain CE456_18110 SM00532 Ligase N family CE456_18115 SM00771 ZipA, C-terminal domain (FtsZ-binding) CE456_18150 SM00062 Bacterial periplasmic substrate-binding proteins CE456_18215 SM00861 Transketolase, pyrimidine binding domain CE456_18225 SM00731 SprT homologues. CE456_18265 SM00732 Likely ribonuclease with RNase H fold. CE456_18295 SM00460 Transglutaminase/protease-like homologues CE456_18320 SM00986 Uracil DNA glycosylase superfamily CE456_18320 SM00987 UreE urease accessory protein, C-terminal domain CE456_18375 SM00937 CE456_18375 CE456_18400 SM01400 CE456_18400 CE456_18475 SM00100 Cyclic nucleotide-monophosphate binding domain CE456_18480 SM01022 CE456_18480 CE456_18520 SM00642 Alpha-amylase domain CE456_18535 SM00382 ATPases associated with a variety of cellular activities CE456_18560 SM01150 CE456_18560 CE456_18645 SM00842 Cell division protein FtsA CE456_18660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_18660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_18670 SM00849 Metallo-beta-lactamase superfamily CE456_18725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_18725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_18785 SM01236 CE456_18785 CE456_18790 SM00822 CE456_18790 CE456_18800 SM00448 cheY-homologous receiver domain CE456_18800 SM00862 Transcriptional regulatory protein, C terminal CE456_18805 SM00387 Histidine kinase-like ATPases CE456_18805 SM00388 His Kinase A (phosphoacceptor) domain CE456_18815 SM01240 CE456_18815 CE456_18825 SM00841 Elongation factor P, C-terminal CE456_18825 SM01185 CE456_18825 CE456_18870 SM00267 diguanylate cyclase CE456_18875 SM00357 Cold shock protein domain CE456_18885 SM00729 Elongator protein 3, MiaB family, Radical SAM CE456_18900 SM00116 Domain in cystathionine beta-synthase and other proteins. CE456_18900 SM01091 Transporter associated domain CE456_18970 SM00936 Penicillin-binding protein 5, C-terminal domain CE456_18990 SM00729 Elongator protein 3, MiaB family, Radical SAM CE456_19040 SM00267 diguanylate cyclase CE456_19130 SM00267 diguanylate cyclase CE456_19140 SM00316 Ribosomal protein S1-like RNA-binding domain CE456_19140 SM00322 K homology RNA-binding domain CE456_19145 SM01387 CE456_19145 CE456_19165 SM00316 Ribosomal protein S1-like RNA-binding domain CE456_19205 SM00382 ATPases associated with a variety of cellular activities CE456_19215 SM01103 CE456_19215 CE456_19260 SM00861 Transketolase, pyrimidine binding domain CE456_19280 SM00382 ATPases associated with a variety of cellular activities CE456_19375 SM00052 Putative diguanylate phosphodiesterase CE456_19375 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CE456_19375 SM00091 PAS domain CE456_19375 SM00267 diguanylate cyclase CE456_19400 SM00878 Biotin carboxylase C-terminal domain CE456_19425 SM00829 Enoylreductase CE456_19490 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CE456_19500 SM00870 CE456_19500 CE456_19510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_19510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_19555 SM00382 ATPases associated with a variety of cellular activities CE456_19585 SM00852 Probable molybdopterin binding domain CE456_19595 SM00825 Beta-ketoacyl synthase CE456_19600 SM00822 CE456_19600 CE456_19610 SM00825 Beta-ketoacyl synthase CE456_19670 SM00563 Phosphate acyltransferases CE456_19705 SM00477 DNA/RNA non-specific endonuclease CE456_19705 SM00892 DNA/RNA non-specific endonuclease CE456_19720 SM01057 Eukaryotic-type carbonic anhydrase CE456_19765 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CE456_19805 SM00382 ATPases associated with a variety of cellular activities CE456_19810 SM00382 ATPases associated with a variety of cellular activities CE456_19875 SM00028 Tetratricopeptide repeats CE456_19880 SM00495 Chitin-binding domain type 3 CE456_19880 SM00636 CE456_19880 CE456_19935 SM00357 Cold shock protein domain CE456_19975 SM00479 CE456_19975 CE456_20010 SM00052 Putative diguanylate phosphodiesterase CE456_20010 SM00091 PAS domain CE456_20010 SM00267 diguanylate cyclase CE456_20065 SM00382 ATPases associated with a variety of cellular activities CE456_20075 SM00450 Rhodanese Homology Domain CE456_20105 SM00052 Putative diguanylate phosphodiesterase CE456_20120 SM00382 ATPases associated with a variety of cellular activities CE456_20130 SM00260 Two component signalling adaptor domain CE456_20130 SM00448 cheY-homologous receiver domain CE456_20135 SM00327 von Willebrand factor (vWF) type A domain CE456_20170 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CE456_20185 SM00448 cheY-homologous receiver domain CE456_20195 SM00382 ATPases associated with a variety of cellular activities CE456_20315 SM00487 DEAD-like helicases superfamily CE456_20315 SM00490 helicase superfamily c-terminal domain CE456_20345 SM00194 Protein tyrosine phosphatase, catalytic domain CE456_20345 SM00404 Protein tyrosine phosphatase, catalytic domain motif CE456_20415 SM00857 Resolvase, N terminal domain CE456_20540 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CE456_20550 SM00382 ATPases associated with a variety of cellular activities CE456_20570 SM00450 Rhodanese Homology Domain CE456_20580 SM00345 helix_turn_helix gluconate operon transcriptional repressor CE456_20630 SM00342 helix_turn_helix, arabinose operon control protein CE456_20665 SM00421 helix_turn_helix, Lux Regulon CE456_20715 SM00382 ATPases associated with a variety of cellular activities CE456_20730 SM00363 S4 RNA-binding domain CE456_20745 SM00345 helix_turn_helix gluconate operon transcriptional repressor CE456_20745 SM00895 CE456_20745 CE456_20780 SM00421 helix_turn_helix, Lux Regulon CE456_20795 SM00357 Cold shock protein domain CE456_20795 SM00955 CE456_20795 CE456_20830 SM00271 DnaJ molecular chaperone homology domain CE456_20880 SM00487 DEAD-like helicases superfamily CE456_20880 SM00490 helicase superfamily c-terminal domain CE456_20930 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CE456_20940 SM00862 Transcriptional regulatory protein, C terminal CE456_21135 SM00642 Alpha-amylase domain CE456_21155 SM00344 helix_turn_helix ASNC type CE456_21175 SM00852 Probable molybdopterin binding domain CE456_21185 SM00382 ATPases associated with a variety of cellular activities CE456_21225 SM00100 Cyclic nucleotide-monophosphate binding domain CE456_21260 SM01219 CE456_21260 CE456_21390 SM00876 Biotin and Thiamin Synthesis associated domain CE456_21460 SM00194 Protein tyrosine phosphatase, catalytic domain CE456_21460 SM00404 Protein tyrosine phosphatase, catalytic domain motif CE456_21590 SM01152 CE456_21590 CE456_21610 SM00382 ATPases associated with a variety of cellular activities CE456_21625 SM00487 DEAD-like helicases superfamily CE456_21625 SM00490 helicase superfamily c-terminal domain CE456_21670 SM00411 bacterial (prokaryotic) histone like domain CE456_21685 SM00382 ATPases associated with a variety of cellular activities CE456_21720 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CE456_21725 SM01133 CE456_21725 CE456_21800 SM00448 cheY-homologous receiver domain CE456_21800 SM00862 Transcriptional regulatory protein, C terminal CE456_21805 SM00388 His Kinase A (phosphoacceptor) domain CE456_21855 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CE456_21855 SM00091 PAS domain CE456_21865 SM00331 Sigma factor PP2C-like phosphatases CE456_21865 SM00387 Histidine kinase-like ATPases CE456_21870 SM00387 Histidine kinase-like ATPases CE456_21870 SM00388 His Kinase A (phosphoacceptor) domain CE456_21870 SM00448 cheY-homologous receiver domain CE456_21875 SM00448 cheY-homologous receiver domain CE456_21875 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CE456_21920 SM00316 Ribosomal protein S1-like RNA-binding domain CE456_21970 SM00965 Secretin and TonB N terminus short domain CE456_22000 SM00052 Putative diguanylate phosphodiesterase CE456_22000 SM00267 diguanylate cyclase CE456_22035 SM00345 helix_turn_helix gluconate operon transcriptional repressor CE456_22035 SM00866 CE456_22035 CE456_22040 SM00947 Carbonic anhydrase CE456_22055 SM00382 ATPases associated with a variety of cellular activities CE456_22060 SM00382 ATPases associated with a variety of cellular activities CE456_22060 SM00962 SRP54-type protein, GTPase domain CE456_22060 SM00963 SRP54-type protein, helical bundle domain CE456_22090 SM00155 Phospholipase D. Active site motifs. CE456_22095 SM00062 Bacterial periplasmic substrate-binding proteins CE456_22275 SM00749 bacterial OsmY and nodulation domain CE456_22325 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CE456_22330 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CE456_22410 SM00382 ATPases associated with a variety of cellular activities CE456_22430 SM00116 Domain in cystathionine beta-synthase and other proteins. CE456_22435 SM00382 ATPases associated with a variety of cellular activities CE456_22530 SM00662 RNA polymerases D CE456_22535 SM00363 S4 RNA-binding domain CE456_22535 SM01390 CE456_22535 CE456_22605 SM01374 CE456_22605 CE456_22625 SM00322 K homology RNA-binding domain CE456_22640 SM01382 CE456_22640 CE456_22640 SM01383 CE456_22640 CE456_22660 SM01403 CE456_22660 CE456_22670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_22670 SM00387 Histidine kinase-like ATPases CE456_22670 SM00388 His Kinase A (phosphoacceptor) domain CE456_22675 SM00448 cheY-homologous receiver domain CE456_22675 SM00862 Transcriptional regulatory protein, C terminal CE456_22685 SM00316 Ribosomal protein S1-like RNA-binding domain CE456_22685 SM00732 Likely ribonuclease with RNase H fold. CE456_22730 SM00450 Rhodanese Homology Domain CE456_22750 SM00354 helix_turn _helix lactose operon repressor CE456_22775 SM00155 Phospholipase D. Active site motifs. CE456_22780 SM00487 DEAD-like helicases superfamily CE456_22780 SM00490 helicase superfamily c-terminal domain CE456_22815 SM01230 CE456_22815 CE456_22825 SM00091 PAS domain CE456_22825 SM00387 Histidine kinase-like ATPases CE456_22825 SM00388 His Kinase A (phosphoacceptor) domain CE456_22830 SM00382 ATPases associated with a variety of cellular activities CE456_22830 SM00448 cheY-homologous receiver domain CE456_22840 SM00729 Elongator protein 3, MiaB family, Radical SAM CE456_22885 SM01001 AIR carboxylase CE456_22905 SM00257 Lysin motif CE456_22960 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CE456_22960 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CE456_22980 SM00530 Helix-turn-helix XRE-family like proteins CE456_23000 SM00342 helix_turn_helix, arabinose operon control protein CE456_23010 SM00831 Cation transporter/ATPase, N-terminus CE456_23040 SM00924 MgtE intracellular N domain CE456_23045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CE456_23045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_23045 SM01358 CE456_23045 CE456_23075 SM00341 Helicase and RNase D C-terminal CE456_23075 SM00487 DEAD-like helicases superfamily CE456_23075 SM00490 helicase superfamily c-terminal domain CE456_23075 SM00956 CE456_23075 CE456_23115 SM00382 ATPases associated with a variety of cellular activities CE456_23135 SM01230 CE456_23135 CE456_23175 SM00642 Alpha-amylase domain CE456_23215 SM00822 CE456_23215 CE456_23240 SM00858 CE456_23240 CE456_23315 SM00448 cheY-homologous receiver domain CE456_23315 SM00862 Transcriptional regulatory protein, C terminal CE456_23320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_23320 SM00387 Histidine kinase-like ATPases CE456_23320 SM00388 His Kinase A (phosphoacceptor) domain CE456_23330 SM00919 Malic enzyme, NAD binding domain CE456_23330 SM01274 CE456_23330 CE456_23345 SM00487 DEAD-like helicases superfamily CE456_23345 SM00490 helicase superfamily c-terminal domain CE456_23395 SM00382 ATPases associated with a variety of cellular activities CE456_23425 SM00062 Bacterial periplasmic substrate-binding proteins CE456_23430 SM00382 ATPases associated with a variety of cellular activities CE456_23460 SM00267 diguanylate cyclase CE456_23465 SM00422 helix_turn_helix, mercury resistance CE456_23535 SM00829 Enoylreductase CE456_23630 SM00448 cheY-homologous receiver domain CE456_23630 SM00862 Transcriptional regulatory protein, C terminal CE456_23635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CE456_23635 SM00387 Histidine kinase-like ATPases CE456_23635 SM00388 His Kinase A (phosphoacceptor) domain CE456_23675 SM00836 DALR anticodon binding domain CE456_23695 SM00866 CE456_23695 CE456_23700 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CE456_23700 SM00382 ATPases associated with a variety of cellular activities CE456_23740 SM00052 Putative diguanylate phosphodiesterase CE456_23755 SM00194 Protein tyrosine phosphatase, catalytic domain CE456_23755 SM00404 Protein tyrosine phosphatase, catalytic domain motif CE456_23800 SM00354 helix_turn _helix lactose operon repressor CE456_23820 SM00382 ATPases associated with a variety of cellular activities CE456_23825 SM00382 ATPases associated with a variety of cellular activities CE456_23830 SM00342 helix_turn_helix, arabinose operon control protein CE456_23840 SM00450 Rhodanese Homology Domain CE456_23875 SM00357 Cold shock protein domain CE456_23875 SM00382 ATPases associated with a variety of cellular activities CE456_23875 SM00959 Rho termination factor, N-terminal domain CE456_23885 SM00487 DEAD-like helicases superfamily CE456_23885 SM00490 helicase superfamily c-terminal domain CE456_23905 SM00062 Bacterial periplasmic substrate-binding proteins CE456_23910 SM00052 Putative diguanylate phosphodiesterase CE456_23910 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CE456_23910 SM00091 PAS domain CE456_23910 SM00267 diguanylate cyclase CE456_23920 SM01004 Delta-aminolevulinic acid dehydratase CE456_24030 SM00421 helix_turn_helix, Lux Regulon CE456_24040 SM00420 helix_turn_helix, Deoxyribose operon repressor CE456_24040 SM01134 CE456_24040 CE456_24045 SM00448 cheY-homologous receiver domain CE456_24045 SM00862 Transcriptional regulatory protein, C terminal CE456_24075 SM00382 ATPases associated with a variety of cellular activities CE456_24115 SM00470 ParB-like nuclease domain CE456_24130 SM01228 CE456_24130 CE456_24145 SM00382 ATPases associated with a variety of cellular activities CE456_24150 SM00382 ATPases associated with a variety of cellular activities CE456_24165 SM00965 Secretin and TonB N terminus short domain CE456_24175 SM00382 ATPases associated with a variety of cellular activities CE456_24190 SM00382 ATPases associated with a variety of cellular activities CE456_24195 SM00382 ATPases associated with a variety of cellular activities CE456_24240 SM01234 CE456_24240 CE456_24255 SM00382 ATPases associated with a variety of cellular activities CE456_24265 SM00062 Bacterial periplasmic substrate-binding proteins