locus-tag class description CE463_00040 PF04381 Putative exonuclease, RdgC CE463_00080 PF00565 Staphylococcal nuclease homologue CE463_00085 PF00216 Bacterial DNA-binding protein CE463_00110 PF13614 AAA domain CE463_00115 PF06613 KorB C-terminal beta-barrel domain CE463_00115 PF02195 ParB-like nuclease domain CE463_00115 PF08535 KorB domain CE463_00165 PF10544 T5orf172 domain CE463_00190 PF01751 Toprim domain CE463_00190 PF01131 DNA topoisomerase CE463_00265 PF10411 Disulfide bond isomerase protein N-terminus CE463_00265 PF13098 Thioredoxin-like domain CE463_00295 PF06834 TraU protein CE463_00300 PF06986 Type-1V conjugative transfer system mating pair stabilisation CE463_00330 PF08406 CbbQ/NirQ/NorQ C-terminal CE463_00330 PF07728 AAA domain (dynein-related subfamily) CE463_00395 PF00111 2Fe-2S iron-sulfur cluster binding domain CE463_00470 PF13401 AAA domain CE463_00470 PF01471 Putative peptidoglycan binding domain CE463_00495 PF09615 CRISPR-associated protein (Cas_Csy3) CE463_00510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CE463_00515 PF00873 AcrB/AcrD/AcrF family CE463_00520 PF02321 Outer membrane efflux protein CE463_00530 PF00881 Nitroreductase family CE463_00535 PF03466 LysR substrate binding domain CE463_00535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_00640 PF00589 Phage integrase family CE463_00640 PF02899 Phage integrase, N-terminal SAM-like domain CE463_00645 PF01381 Helix-turn-helix CE463_00650 PF07804 HipA-like C-terminal domain CE463_00650 PF13657 HipA N-terminal domain CE463_00690 PF00376 MerR family regulatory protein CE463_00690 PF09278 MerR, DNA binding CE463_00695 PF02411 MerT mercuric transport protein CE463_00700 PF00403 Heavy-metal-associated domain CE463_00710 PF13700 Domain of unknown function (DUF4158) CE463_00710 PF01526 Tn3 transposase DDE domain CE463_00730 PF13700 Domain of unknown function (DUF4158) CE463_00730 PF01526 Tn3 transposase DDE domain CE463_00735 PF02796 Helix-turn-helix domain of resolvase CE463_00735 PF00239 Resolvase, N terminal domain CE463_00740 PF01636 Phosphotransferase enzyme family CE463_00745 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase CE463_00780 PF02463 RecF/RecN/SMC N terminal domain CE463_00815 PF02796 Helix-turn-helix domain of resolvase CE463_00815 PF00239 Resolvase, N terminal domain CE463_00825 PF00589 Phage integrase family CE463_00825 PF13495 Phage integrase, N-terminal SAM-like domain CE463_00830 PF00186 Dihydrofolate reductase CE463_00835 PF00893 Small Multidrug Resistance protein CE463_00840 PF00809 Pterin binding enzyme CE463_00855 PF05598 Transposase domain (DUF772) CE463_00855 PF01609 Transposase DDE domain CE463_00870 PF13599 Pentapeptide repeats (9 copies) CE463_00875 PF13737 Transposase DDE domain CE463_00890 PF07690 Major Facilitator Superfamily CE463_00895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_00895 PF03466 LysR substrate binding domain CE463_00905 PF13700 Domain of unknown function (DUF4158) CE463_00905 PF01526 Tn3 transposase DDE domain CE463_00910 PF02796 Helix-turn-helix domain of resolvase CE463_00910 PF00239 Resolvase, N terminal domain CE463_00920 PF00589 Phage integrase family CE463_00920 PF13495 Phage integrase, N-terminal SAM-like domain CE463_00930 PF00905 Penicillin binding protein transpeptidase domain CE463_00935 PF00132 Bacterial transferase hexapeptide (six repeats) CE463_00945 PF00893 Small Multidrug Resistance protein CE463_00950 PF00809 Pterin binding enzyme CE463_00970 PF03551 Transcriptional regulator PadR-like family CE463_00980 PF13610 DDE domain CE463_01000 PF01636 Phosphotransferase enzyme family CE463_01005 PF13610 DDE domain CE463_01010 PF01636 Phosphotransferase enzyme family CE463_01020 PF13610 DDE domain CE463_01040 PF00672 HAMP domain CE463_01040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_01070 PF06122 Conjugative relaxosome accessory transposon protein CE463_01140 PF01527 Transposase CE463_01185 PF13614 AAA domain CE463_01195 PF01526 Tn3 transposase DDE domain CE463_01195 PF13700 Domain of unknown function (DUF4158) CE463_01205 PF01934 Protein of unknown function DUF86 CE463_01210 PF02796 Helix-turn-helix domain of resolvase CE463_01210 PF00239 Resolvase, N terminal domain CE463_01225 PF05513 TraA CE463_01230 PF07178 TraL protein CE463_01235 PF05309 TraE protein CE463_01245 PF03743 Bacterial conjugation TrbI-like protein CE463_01250 PF09676 Type IV conjugative transfer system lipoprotein (TraV) CE463_01255 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer CE463_01265 PF12477 Sex factor F TraW protein N terminal CE463_01270 PF06834 TraU protein CE463_01275 PF09673 Type-F conjugative transfer system pilin assembly protein CE463_01285 PF06986 Type-1V conjugative transfer system mating pair stabilisation CE463_01290 PF13728 F plasmid transfer operon protein CE463_01300 PF13728 F plasmid transfer operon protein CE463_01305 PF06122 Conjugative relaxosome accessory transposon protein CE463_01310 PF07916 TraG-like protein, N-terminal region CE463_01320 PF05818 Enterobacterial TraT complement resistance protein CE463_01325 PF12615 F sex factor protein N terminal CE463_01325 PF10412 Type IV secretion-system coupling protein DNA-binding domain CE463_01330 PF18272 single-stranded DNA binding TraI N-terminal subdomain CE463_01330 PF07057 DNA helicase TraI CE463_01330 PF18340 DNA relaxase TraI 2B/2B-like domain CE463_01330 PF08751 TrwC relaxase CE463_01335 PF05261 TraM protein, DNA-binding CE463_01340 PF01464 Transglycosylase SLT domain CE463_01355 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A CE463_01360 PF05598 Transposase domain (DUF772) CE463_01360 PF01609 Transposase DDE domain CE463_01365 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A CE463_01385 PF01555 DNA methylase CE463_01410 PF04002 RadC-like JAB domain CE463_01440 PF01848 Hok/gef family CE463_01465 PF13614 AAA domain CE463_01485 PF12419 SNF2 Helicase protein CE463_01485 PF00271 Helicase conserved C-terminal domain CE463_01485 PF00176 SNF2 family N-terminal domain CE463_01505 PF02796 Helix-turn-helix domain of resolvase CE463_01505 PF00239 Resolvase, N terminal domain CE463_01510 PF00816 H-NS histone family CE463_01520 PF13614 AAA domain CE463_01530 PF00872 Transposase, Mutator family CE463_01555 PF01548 Transposase CE463_01555 PF02371 Transposase IS116/IS110/IS902 family CE463_01560 PF02075 Crossover junction endodeoxyribonuclease RuvC CE463_01565 PF02108 Flagellar assembly protein FliH CE463_01570 PF06578 YOP proteins translocation protein K (YscK) CE463_01575 PF01514 Secretory protein of YscJ/FliF family CE463_01580 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI CE463_01585 PF09025 YopR, type III needle-polymerisation regulator CE463_01590 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) CE463_01595 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF CE463_01605 PF16697 Inner membrane component of T3SS, cytoplasmic domain CE463_01605 PF16693 Inner membrane component of T3SS, periplasmic domain CE463_01615 PF05932 Tir chaperone protein (CesT) family CE463_01625 PF12833 Helix-turn-helix domain CE463_01640 PF05932 Tir chaperone protein (CesT) family CE463_01645 PF05844 YopD protein CE463_01650 PF04888 Secretion system effector C (SseC) like family CE463_01655 PF07720 Tetratricopeptide repeat CE463_01660 PF04792 V antigen (LcrV) protein CE463_01665 PF07216 LcrG protein CE463_01670 PF09621 Type III secretion system regulator (LcrR) CE463_01675 PF00771 FHIPEP family CE463_01685 PF09474 Type III secretion system YscX (type_III_YscX) CE463_01695 PF09059 TyeA CE463_01700 PF07201 HrpJ-like domain CE463_01705 PF18269 T3SS EscN ATPase C-terminal domain CE463_01705 PF02874 ATP synthase alpha/beta family, beta-barrel domain CE463_01705 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CE463_01720 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CE463_01725 PF00813 FliP family CE463_01730 PF01313 Bacterial export proteins, family 3 CE463_01735 PF01311 Bacterial export proteins, family 1 CE463_01740 PF01312 FlhB HrpN YscU SpaS Family CE463_01765 PF00561 alpha/beta hydrolase fold CE463_01775 PF13614 AAA domain CE463_01795 PF01695 IstB-like ATP binding protein CE463_01810 PF00239 Resolvase, N terminal domain CE463_01810 PF02796 Helix-turn-helix domain of resolvase CE463_01840 PF13358 DDE superfamily endonuclease CE463_01840 PF13592 Winged helix-turn helix CE463_01865 PF01848 Hok/gef family CE463_01875 PF00069 Protein kinase domain CE463_01875 PF09632 Rac1-binding domain CE463_01905 PF13614 AAA domain CE463_01930 PF00239 Resolvase, N terminal domain CE463_01930 PF02796 Helix-turn-helix domain of resolvase CE463_01935 PF01934 Protein of unknown function DUF86 CE463_01945 PF13700 Domain of unknown function (DUF4158) CE463_01945 PF01526 Tn3 transposase DDE domain CE463_02015 PF00308 Bacterial dnaA protein CE463_02015 PF11638 DnaA N-terminal domain CE463_02015 PF08299 Bacterial dnaA protein helix-turn-helix CE463_02020 PF00712 DNA polymerase III beta subunit, N-terminal domain CE463_02020 PF02767 DNA polymerase III beta subunit, central domain CE463_02020 PF02768 DNA polymerase III beta subunit, C-terminal domain CE463_02025 PF02463 RecF/RecN/SMC N terminal domain CE463_02030 PF00204 DNA gyrase B CE463_02030 PF01751 Toprim domain CE463_02030 PF00986 DNA gyrase B subunit, carboxyl terminus CE463_02030 PF18053 DNA gyrase B subunit insert domain CE463_02030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_02045 PF08279 HTH domain CE463_02045 PF13280 WYL domain CE463_02050 PF00011 Hsp20/alpha crystallin family CE463_02055 PF00011 Hsp20/alpha crystallin family CE463_02070 PF00155 Aminotransferase class I and II CE463_02085 PF07690 Major Facilitator Superfamily CE463_02090 PF00072 Response regulator receiver domain CE463_02090 PF00486 Transcriptional regulatory protein, C terminal CE463_02095 PF13492 GAF domain CE463_02095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_02095 PF00512 His Kinase A (phospho-acceptor) domain CE463_02095 PF02702 Osmosensitive K+ channel His kinase sensor domain CE463_02095 PF13493 Domain of unknown function (DUF4118) CE463_02100 PF02669 K+-transporting ATPase, c chain CE463_02110 PF03814 Potassium-transporting ATPase A subunit CE463_02120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CE463_02120 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE463_02125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_02125 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE463_02125 PF00512 His Kinase A (phospho-acceptor) domain CE463_02130 PF00873 AcrB/AcrD/AcrF family CE463_02135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CE463_02140 PF00440 Bacterial regulatory proteins, tetR family CE463_02175 PF12146 Serine aminopeptidase, S33 CE463_02180 PF12105 SpoU, rRNA methylase, C-terminal CE463_02180 PF00588 SpoU rRNA Methylase family CE463_02185 PF04607 Region found in RelA / SpoT proteins CE463_02185 PF02824 TGS domain CE463_02185 PF13291 ACT domain CE463_02190 PF01192 RNA polymerase Rpb6 CE463_02195 PF00625 Guanylate kinase CE463_02205 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CE463_02220 PF00892 EamA-like transporter family CE463_02240 PF03466 LysR substrate binding domain CE463_02240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_02245 PF00579 tRNA synthetases class I (W and Y) CE463_02250 PF00582 Universal stress protein family CE463_02255 PF12241 Trans-2-enoyl-CoA reductase catalytic region CE463_02255 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CE463_02255 PF07055 Enoyl reductase FAD binding domain CE463_02265 PF00210 Ferritin-like domain CE463_02275 PF01810 LysE type translocator CE463_02295 PF13808 DDE_Tnp_1-associated CE463_02295 PF01609 Transposase DDE domain CE463_02310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_02310 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE463_02310 PF01627 Hpt domain CE463_02310 PF00989 PAS fold CE463_02310 PF00072 Response regulator receiver domain CE463_02310 PF00512 His Kinase A (phospho-acceptor) domain CE463_02320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_02320 PF00512 His Kinase A (phospho-acceptor) domain CE463_02320 PF01627 Hpt domain CE463_02320 PF00989 PAS fold CE463_02320 PF00072 Response regulator receiver domain CE463_02320 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE463_02330 PF06580 Histidine kinase CE463_02330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_02330 PF07694 5TMR of 5TMR-LYT CE463_02335 PF04397 LytTr DNA-binding domain CE463_02335 PF00072 Response regulator receiver domain CE463_02340 PF07690 Major Facilitator Superfamily CE463_02345 PF02222 ATP-grasp domain CE463_02345 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CE463_02350 PF00731 AIR carboxylase CE463_02365 PF03466 LysR substrate binding domain CE463_02365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_02370 PF07715 TonB-dependent Receptor Plug Domain CE463_02370 PF00593 TonB dependent receptor CE463_02375 PF01177 Asp/Glu/Hydantoin racemase CE463_02405 PF00583 Acetyltransferase (GNAT) family CE463_02405 PF13380 CoA binding domain CE463_02405 PF13607 Succinyl-CoA ligase like flavodoxin domain CE463_02420 PF03466 LysR substrate binding domain CE463_02420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_02425 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CE463_02425 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CE463_02430 PF00342 Phosphoglucose isomerase CE463_02440 PF05552 Conserved TM helix CE463_02440 PF00924 Mechanosensitive ion channel CE463_02445 PF00440 Bacterial regulatory proteins, tetR family CE463_02450 PF00692 dUTPase CE463_02455 PF02441 Flavoprotein CE463_02455 PF04127 DNA / pantothenate metabolism flavoprotein CE463_02460 PF04002 RadC-like JAB domain CE463_02465 PF00830 Ribosomal L28 family CE463_02470 PF00471 Ribosomal protein L33 CE463_02480 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CE463_02480 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CE463_02480 PF06827 Zinc finger found in FPG and IleRS CE463_02485 PF04393 Protein of unknown function (DUF535) CE463_02490 PF01467 Cytidylyltransferase-like CE463_02495 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CE463_02500 PF00535 Glycosyl transferase family 2 CE463_02505 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CE463_02510 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CE463_02515 PF03611 PTS system sugar-specific permease component CE463_02525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CE463_02530 PF00356 Bacterial regulatory proteins, lacI family CE463_02530 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CE463_02560 PF03748 Flagellar basal body-associated protein FliL CE463_02565 PF04345 Chorismate lyase CE463_02570 PF01040 UbiA prenyltransferase family CE463_02575 PF01553 Acyltransferase CE463_02580 PF00717 Peptidase S24-like CE463_02580 PF01726 LexA DNA binding domain CE463_02590 PF02630 SCO1/SenC CE463_02595 PF01554 MatE CE463_02600 PF00588 SpoU rRNA Methylase family CE463_02605 PF00512 His Kinase A (phospho-acceptor) domain CE463_02605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_02605 PF00672 HAMP domain CE463_02605 PF16527 Two-component sensor protein CpxA, periplasmic domain CE463_02610 PF00072 Response regulator receiver domain CE463_02610 PF00486 Transcriptional regulatory protein, C terminal CE463_02615 PF16916 Dimerisation domain of Zinc Transporter CE463_02615 PF01545 Cation efflux family CE463_02620 PF06426 Serine acetyltransferase, N-terminal CE463_02620 PF00132 Bacterial transferase hexapeptide (six repeats) CE463_02630 PF06005 Cell division protein ZapB CE463_02645 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CE463_02645 PF00476 DNA polymerase family A CE463_02645 PF01612 3'-5' exonuclease CE463_02645 PF01367 5'-3' exonuclease, C-terminal SAM fold CE463_02650 PF00132 Bacterial transferase hexapeptide (six repeats) CE463_02700 PF00356 Bacterial regulatory proteins, lacI family CE463_02705 PF13593 SBF-like CPA transporter family (DUF4137) CE463_02710 PF03781 Sulfatase-modifying factor enzyme 1 CE463_02710 PF12867 DinB superfamily CE463_02720 PF00756 Putative esterase CE463_02725 PF00107 Zinc-binding dehydrogenase CE463_02725 PF08240 Alcohol dehydrogenase GroES-like domain CE463_02730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_02730 PF03466 LysR substrate binding domain CE463_02755 PF00580 UvrD/REP helicase N-terminal domain CE463_02755 PF13361 UvrD-like helicase C-terminal domain CE463_02795 PF04143 Sulphur transport CE463_02800 PF01609 Transposase DDE domain CE463_02800 PF13808 DDE_Tnp_1-associated CE463_02810 PF18267 Rubredoxin NAD+ reductase C-terminal domain CE463_02810 PF04324 BFD-like [2Fe-2S] binding domain CE463_02810 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CE463_02810 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CE463_02810 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE463_02815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_02815 PF03466 LysR substrate binding domain CE463_02820 PF07690 Major Facilitator Superfamily CE463_02825 PF00004 ATPase family associated with various cellular activities (AAA) CE463_02825 PF07724 AAA domain (Cdc48 subfamily) CE463_02825 PF10431 C-terminal, D2-small domain, of ClpB protein CE463_02830 PF00227 Proteasome subunit CE463_02840 PF00750 tRNA synthetases class I (R) CE463_02840 PF05746 DALR anticodon binding domain CE463_02840 PF03485 Arginyl tRNA synthetase N terminal domain CE463_02850 PF04542 Sigma-70 region 2 CE463_02850 PF04545 Sigma-70, region 4 CE463_02860 PF02673 Bacitracin resistance protein BacA CE463_02865 PF00248 Aldo/keto reductase family CE463_02870 PF01263 Aldose 1-epimerase CE463_02875 PF00288 GHMP kinases N terminal domain CE463_02875 PF08544 GHMP kinases C terminal CE463_02875 PF10509 Galactokinase galactose-binding signature CE463_02880 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CE463_02880 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CE463_02885 PF16363 GDP-mannose 4,6 dehydratase CE463_02890 PF00356 Bacterial regulatory proteins, lacI family CE463_02895 PF02929 Beta galactosidase small chain CE463_02895 PF16353 Domain of unknown function(DUF4981) CE463_02895 PF02837 Glycosyl hydrolases family 2, sugar binding domain CE463_02895 PF00703 Glycosyl hydrolases family 2 CE463_02895 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CE463_02900 PF13407 Periplasmic binding protein domain CE463_02905 PF00005 ABC transporter CE463_02910 PF02653 Branched-chain amino acid transport system / permease component CE463_02915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_02915 PF02743 Cache domain CE463_02915 PF00672 HAMP domain CE463_02920 PF00872 Transposase, Mutator family CE463_02935 PF13358 DDE superfamily endonuclease CE463_02935 PF13592 Winged helix-turn helix CE463_02945 PF00696 Amino acid kinase family CE463_02950 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CE463_02950 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CE463_02955 PF03606 C4-dicarboxylate anaerobic carrier CE463_02960 PF02863 Arginine repressor, C-terminal domain CE463_02960 PF01316 Arginine repressor, DNA binding domain CE463_02965 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CE463_02965 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CE463_02970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CE463_02970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CE463_02985 PF02666 Phosphatidylserine decarboxylase CE463_02990 PF02743 Cache domain CE463_02990 PF00672 HAMP domain CE463_02990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_02995 PF08212 Lipocalin-like domain CE463_03005 PF00465 Iron-containing alcohol dehydrogenase CE463_03010 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CE463_03010 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CE463_03010 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CE463_03015 PF02233 NAD(P) transhydrogenase beta subunit CE463_03025 PF13309 HTH domain CE463_03025 PF08348 YheO-like PAS domain CE463_03030 PF03313 Serine dehydratase alpha chain CE463_03035 PF00375 Sodium:dicarboxylate symporter family CE463_03040 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE463_03040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CE463_03045 PF13525 Outer membrane lipoprotein CE463_03050 PF00849 RNA pseudouridylate synthase CE463_03050 PF01479 S4 domain CE463_03060 PF10431 C-terminal, D2-small domain, of ClpB protein CE463_03060 PF02861 Clp amino terminal domain, pathogenicity island component CE463_03060 PF17871 AAA lid domain CE463_03060 PF07724 AAA domain (Cdc48 subfamily) CE463_03060 PF00004 ATPase family associated with various cellular activities (AAA) CE463_03065 PF03590 Aspartate-ammonia ligase CE463_03070 PF01037 Lrp/AsnC ligand binding domain CE463_03080 PF10063 Uncharacterized integral membrane protein (DUF2301) CE463_03085 PF00571 CBS domain CE463_03085 PF00478 IMP dehydrogenase / GMP reductase domain CE463_03100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_03100 PF00512 His Kinase A (phospho-acceptor) domain CE463_03110 PF00158 Sigma-54 interaction domain CE463_03110 PF00072 Response regulator receiver domain CE463_03115 PF06496 Protein of unknown function (DUF1097) CE463_03125 PF00174 Oxidoreductase molybdopterin binding domain CE463_03130 PF01794 Ferric reductase like transmembrane component CE463_03145 PF00072 Response regulator receiver domain CE463_03145 PF00486 Transcriptional regulatory protein, C terminal CE463_03150 PF08918 PhoQ Sensor CE463_03150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_03160 PF00384 Molybdopterin oxidoreductase CE463_03160 PF18364 Molybdopterin oxidoreductase N-terminal domain CE463_03160 PF01568 Molydopterin dinucleotide binding domain CE463_03165 PF03264 NapC/NirT cytochrome c family, N-terminal region CE463_03170 PF01751 Toprim domain CE463_03170 PF01131 DNA topoisomerase CE463_03175 PF02386 Cation transport protein CE463_03180 PF02080 TrkA-C domain CE463_03180 PF02254 TrkA-N domain CE463_03185 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CE463_03185 PF01565 FAD binding domain CE463_03190 PF03099 Biotin/lipoate A/B protein ligase family CE463_03190 PF02237 Biotin protein ligase C terminal domain CE463_03190 PF08279 HTH domain CE463_03195 PF00485 Phosphoribulokinase / Uridine kinase family CE463_03210 PF03143 Elongation factor Tu C-terminal domain CE463_03210 PF00009 Elongation factor Tu GTP binding domain CE463_03210 PF03144 Elongation factor Tu domain 2 CE463_03220 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CE463_03225 PF00467 KOW motif CE463_03225 PF02357 Transcription termination factor nusG CE463_03230 PF03946 Ribosomal protein L11, N-terminal domain CE463_03230 PF00298 Ribosomal protein L11, RNA binding domain CE463_03235 PF00687 Ribosomal protein L1p/L10e family CE463_03240 PF00466 Ribosomal protein L10 CE463_03245 PF16320 Ribosomal protein L7/L12 dimerisation domain CE463_03245 PF00542 Ribosomal protein L7/L12 C-terminal domain CE463_03250 PF04565 RNA polymerase Rpb2, domain 3 CE463_03250 PF04560 RNA polymerase Rpb2, domain 7 CE463_03250 PF04561 RNA polymerase Rpb2, domain 2 CE463_03250 PF00562 RNA polymerase Rpb2, domain 6 CE463_03250 PF10385 RNA polymerase beta subunit external 1 domain CE463_03250 PF04563 RNA polymerase beta subunit CE463_03255 PF05000 RNA polymerase Rpb1, domain 4 CE463_03255 PF04998 RNA polymerase Rpb1, domain 5 CE463_03255 PF04983 RNA polymerase Rpb1, domain 3 CE463_03255 PF04997 RNA polymerase Rpb1, domain 1 CE463_03255 PF00623 RNA polymerase Rpb1, domain 2 CE463_03260 PF08348 YheO-like PAS domain CE463_03260 PF13309 HTH domain CE463_03265 PF01042 Endoribonuclease L-PSP CE463_03270 PF02635 DsrE/DsrF-like family CE463_03275 PF02635 DsrE/DsrF-like family CE463_03280 PF04077 DsrH like protein CE463_03285 PF00164 Ribosomal protein S12/S23 CE463_03290 PF00177 Ribosomal protein S7p/S5e CE463_03295 PF03144 Elongation factor Tu domain 2 CE463_03295 PF00009 Elongation factor Tu GTP binding domain CE463_03295 PF00679 Elongation factor G C-terminus CE463_03295 PF03764 Elongation factor G, domain IV CE463_03295 PF14492 Elongation Factor G, domain II CE463_03300 PF03143 Elongation factor Tu C-terminal domain CE463_03300 PF00009 Elongation factor Tu GTP binding domain CE463_03300 PF03144 Elongation factor Tu domain 2 CE463_03365 PF03922 OmpW family CE463_03385 PF02219 Methylenetetrahydrofolate reductase CE463_03395 PF03594 Benzoate membrane transport protein CE463_03400 PF01381 Helix-turn-helix CE463_03400 PF07883 Cupin domain CE463_03440 PF00860 Permease family CE463_03445 PF02733 Dak1 domain CE463_03450 PF02734 DAK2 domain CE463_03455 PF00391 PEP-utilising enzyme, mobile domain CE463_03455 PF05524 PEP-utilising enzyme, N-terminal CE463_03455 PF03610 PTS system fructose IIA component CE463_03455 PF00381 PTS HPr component phosphorylation site CE463_03460 PF00465 Iron-containing alcohol dehydrogenase CE463_03465 PF02954 Bacterial regulatory protein, Fis family CE463_03465 PF00158 Sigma-54 interaction domain CE463_03465 PF00989 PAS fold CE463_03470 PF01594 AI-2E family transporter CE463_03475 PF00293 NUDIX domain CE463_03500 PF06628 Catalase-related immune-responsive CE463_03500 PF00199 Catalase CE463_03505 PF00583 Acetyltransferase (GNAT) family CE463_03525 PF00990 Diguanylate cyclase, GGDEF domain CE463_03535 PF08402 TOBE domain CE463_03535 PF00005 ABC transporter CE463_03545 PF00528 Binding-protein-dependent transport system inner membrane component CE463_03570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_03570 PF03466 LysR substrate binding domain CE463_03580 PF17954 Quercetinase C-terminal cupin domain CE463_03580 PF02678 Pirin CE463_03585 PF07681 DoxX CE463_03590 PF17946 RecC C-terminal domain CE463_03595 PF00580 UvrD/REP helicase N-terminal domain CE463_03595 PF12705 PD-(D/E)XK nuclease superfamily CE463_03595 PF13361 UvrD-like helicase C-terminal domain CE463_03600 PF13538 UvrD-like helicase C-terminal domain CE463_03620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CE463_03630 PF13808 DDE_Tnp_1-associated CE463_03630 PF01609 Transposase DDE domain CE463_03650 PF00543 Nitrogen regulatory protein P-II CE463_03655 PF00990 Diguanylate cyclase, GGDEF domain CE463_03655 PF00072 Response regulator receiver domain CE463_03670 PF00512 His Kinase A (phospho-acceptor) domain CE463_03670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_03670 PF00672 HAMP domain CE463_03675 PF00990 Diguanylate cyclase, GGDEF domain CE463_03685 PF00313 'Cold-shock' DNA-binding domain CE463_03690 PF17151 Periplasmic sensor domain CE463_03690 PF00990 Diguanylate cyclase, GGDEF domain CE463_03695 PF17755 UvrA DNA-binding domain CE463_03695 PF17760 UvrA interaction domain CE463_03695 PF00005 ABC transporter CE463_03700 PF00196 Bacterial regulatory proteins, luxR family CE463_03705 PF00436 Single-strand binding protein family CE463_03750 PF00072 Response regulator receiver domain CE463_03750 PF02954 Bacterial regulatory protein, Fis family CE463_03750 PF00158 Sigma-54 interaction domain CE463_03755 PF02049 Flagellar hook-basal body complex protein FliE CE463_03760 PF08345 Flagellar M-ring protein C-terminal CE463_03760 PF01514 Secretory protein of YscJ/FliF family CE463_03765 PF14842 FliG N-terminal domain CE463_03765 PF14841 FliG middle domain CE463_03765 PF01706 FliG C-terminal domain CE463_03775 PF18269 T3SS EscN ATPase C-terminal domain CE463_03775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CE463_03790 PF04316 Anti-sigma-28 factor, FlgM CE463_03800 PF00460 Flagella basal body rod protein CE463_03805 PF00460 Flagella basal body rod protein CE463_03805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CE463_03810 PF03963 Flagellar hook capping protein - N-terminal region CE463_03815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CE463_03815 PF07559 Flagellar basal body protein FlaE CE463_03815 PF00460 Flagella basal body rod protein CE463_03820 PF00460 Flagella basal body rod protein CE463_03820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CE463_03825 PF00460 Flagella basal body rod protein CE463_03825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CE463_03830 PF02107 Flagellar L-ring protein CE463_03835 PF02119 Flagellar P-ring protein CE463_03845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CE463_03845 PF00460 Flagella basal body rod protein CE463_03865 PF00700 Bacterial flagellin C-terminal helical region CE463_03865 PF00669 Bacterial flagellin N-terminal helical region CE463_03875 PF00700 Bacterial flagellin C-terminal helical region CE463_03875 PF00669 Bacterial flagellin N-terminal helical region CE463_03880 PF07196 Flagellin hook IN motif CE463_03880 PF07195 Flagellar hook-associated protein 2 C-terminus CE463_03880 PF02465 Flagellar hook-associated protein 2 N-terminus CE463_03885 PF02561 Flagellar protein FliS CE463_03905 PF04542 Sigma-70 region 2 CE463_03905 PF04545 Sigma-70, region 4 CE463_03910 PF01618 MotA/TolQ/ExbB proton channel family CE463_03915 PF00691 OmpA family CE463_03915 PF13677 Membrane MotB of proton-channel complex MotA/MotB CE463_03925 PF01464 Transglycosylase SLT domain CE463_03925 PF01476 LysM domain CE463_03935 PF02381 MraZ protein, putative antitoxin-like CE463_03940 PF01795 MraW methylase family CE463_03945 PF04999 Cell division protein FtsL CE463_03950 PF03717 Penicillin-binding Protein dimerisation domain CE463_03950 PF00905 Penicillin binding protein transpeptidase domain CE463_03955 PF01225 Mur ligase family, catalytic domain CE463_03955 PF02875 Mur ligase family, glutamate ligase domain CE463_03955 PF08245 Mur ligase middle domain CE463_03960 PF01225 Mur ligase family, catalytic domain CE463_03960 PF02875 Mur ligase family, glutamate ligase domain CE463_03960 PF08245 Mur ligase middle domain CE463_03965 PF00953 Glycosyl transferase family 4 CE463_03965 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CE463_03970 PF08245 Mur ligase middle domain CE463_03970 PF02875 Mur ligase family, glutamate ligase domain CE463_03975 PF01098 Cell cycle protein CE463_03980 PF03033 Glycosyltransferase family 28 N-terminal domain CE463_03980 PF04101 Glycosyltransferase family 28 C-terminal domain CE463_03985 PF01225 Mur ligase family, catalytic domain CE463_03985 PF02875 Mur ligase family, glutamate ligase domain CE463_03985 PF08245 Mur ligase middle domain CE463_03990 PF08478 POTRA domain, FtsQ-type CE463_03990 PF03799 Cell division protein FtsQ CE463_03995 PF02491 SHS2 domain inserted in FTSA CE463_04000 PF00091 Tubulin/FtsZ family, GTPase domain CE463_04000 PF12327 FtsZ family, C-terminal domain CE463_04005 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CE463_04015 PF07516 SecA Wing and Scaffold domain CE463_04015 PF01043 SecA preprotein cross-linking domain CE463_04015 PF07517 SecA DEAD-like domain CE463_04015 PF02810 SEC-C motif CE463_04025 PF00293 NUDIX domain CE463_04030 PF03884 DNA gyrase inhibitor YacG CE463_04035 PF07072 Cell division protein CE463_04040 PF01121 Dephospho-CoA kinase CE463_04045 PF01478 Type IV leader peptidase family CE463_04045 PF06750 Bacterial Peptidase A24 N-terminal domain CE463_04055 PF00437 Type II/IV secretion system protein CE463_04055 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CE463_04065 PF07963 Prokaryotic N-terminal methylation motif CE463_04075 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CE463_04075 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CE463_04085 PF01510 N-acetylmuramoyl-L-alanine amidase CE463_04090 PF07729 FCD domain CE463_04090 PF00392 Bacterial regulatory proteins, gntR family CE463_04095 PF17831 Pyruvate dehydrogenase E1 component middle domain CE463_04095 PF00456 Transketolase, thiamine diphosphate binding domain CE463_04100 PF02817 e3 binding domain CE463_04100 PF00364 Biotin-requiring enzyme CE463_04100 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CE463_04105 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE463_04105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CE463_04110 PF08448 PAS fold CE463_04110 PF08447 PAS fold CE463_04110 PF00990 Diguanylate cyclase, GGDEF domain CE463_04110 PF13426 PAS domain CE463_04110 PF05231 MASE1 CE463_04110 PF00563 EAL domain CE463_04120 PF00672 HAMP domain CE463_04120 PF12729 Four helix bundle sensory module for signal transduction CE463_04120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_04125 PF12729 Four helix bundle sensory module for signal transduction CE463_04125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_04125 PF00672 HAMP domain CE463_04135 PF00330 Aconitase family (aconitate hydratase) CE463_04135 PF06434 Aconitate hydratase 2 N-terminus CE463_04135 PF11791 Aconitate B N-terminal domain CE463_04140 PF12792 CSS motif domain associated with EAL CE463_04140 PF00563 EAL domain CE463_04150 PF03466 LysR substrate binding domain CE463_04150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_04155 PF03466 LysR substrate binding domain CE463_04155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_04160 PF01810 LysE type translocator CE463_04170 PF07683 Cobalamin synthesis protein cobW C-terminal domain CE463_04170 PF02492 CobW/HypB/UreG, nucleotide-binding domain CE463_04185 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CE463_04190 PF02152 Dihydroneopterin aldolase CE463_04195 PF02660 Glycerol-3-phosphate acyltransferase CE463_04305 PF13358 DDE superfamily endonuclease CE463_04305 PF13592 Winged helix-turn helix CE463_04335 PF00072 Response regulator receiver domain CE463_04335 PF01584 CheW-like domain CE463_04340 PF00106 short chain dehydrogenase CE463_04345 PF17176 tRNA-binding domain CE463_04345 PF05127 Helicase CE463_04345 PF13718 GNAT acetyltransferase 2 CE463_04345 PF08351 Domain of unknown function (DUF1726) CE463_04360 PF00210 Ferritin-like domain CE463_04370 PF02142 MGS-like domain CE463_04385 PF00710 Asparaginase, N-terminal CE463_04385 PF17763 Glutaminase/Asparaginase C-terminal domain CE463_04395 PF00356 Bacterial regulatory proteins, lacI family CE463_04405 PF00480 ROK family CE463_04410 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CE463_04415 PF00232 Glycosyl hydrolase family 1 CE463_04425 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CE463_04430 PF02378 Phosphotransferase system, EIIC CE463_04440 PF00356 Bacterial regulatory proteins, lacI family CE463_04445 PF00367 phosphotransferase system, EIIB CE463_04445 PF02378 Phosphotransferase system, EIIC CE463_04450 PF11941 Domain of unknown function (DUF3459) CE463_04450 PF00128 Alpha amylase, catalytic domain CE463_04455 PF14602 Hexapeptide repeat of succinyl-transferase CE463_04455 PF12464 Maltose acetyltransferase CE463_04465 PF03553 Na+/H+ antiporter family CE463_04500 PF00534 Glycosyl transferases group 1 CE463_04500 PF08323 Starch synthase catalytic domain CE463_04505 PF00483 Nucleotidyl transferase CE463_04510 PF08468 Methyltransferase small domain N-terminal CE463_04510 PF05175 Methyltransferase small domain CE463_04515 PF00701 Dihydrodipicolinate synthetase family CE463_04530 PF13419 Haloacid dehalogenase-like hydrolase CE463_04535 PF17209 Hfq protein CE463_04540 PF04403 Paraquat-inducible protein A CE463_04545 PF02470 MlaD protein CE463_04550 PF03886 ABC-type transport auxiliary lipoprotein component CE463_04555 PF00691 OmpA family CE463_04555 PF01389 OmpA-like transmembrane domain CE463_04565 PF00657 GDSL-like Lipase/Acylhydrolase CE463_04570 PF04076 Bacterial OB fold (BOF) protein CE463_04575 PF01464 Transglycosylase SLT domain CE463_04575 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CE463_04580 PF04362 Bacterial Fe(2+) trafficking CE463_04585 PF00730 HhH-GPD superfamily base excision DNA repair protein CE463_04585 PF10576 Iron-sulfur binding domain of endonuclease III CE463_04585 PF14815 NUDIX domain CE463_04585 PF00633 Helix-hairpin-helix motif CE463_04590 PF16537 Type II secretion system protein B CE463_04595 PF01471 Putative peptidoglycan binding domain CE463_04595 PF13401 AAA domain CE463_04600 PF01966 HD domain CE463_04600 PF12627 Probable RNA and SrmB- binding site of polymerase A CE463_04600 PF01743 Poly A polymerase head domain CE463_04605 PF01384 Phosphate transporter family CE463_04610 PF01865 Protein of unknown function DUF47 CE463_04625 PF03279 Bacterial lipid A biosynthesis acyltransferase CE463_04630 PF00294 pfkB family carbohydrate kinase CE463_04630 PF01467 Cytidylyltransferase-like CE463_04635 PF02321 Outer membrane efflux protein CE463_04640 PF00293 NUDIX domain CE463_04645 PF06853 Protein of unknown function (DUF1249) CE463_04650 PF00149 Calcineurin-like phosphoesterase CE463_04655 PF05728 Uncharacterised protein family (UPF0227) CE463_04660 PF00293 NUDIX domain CE463_04670 PF00204 DNA gyrase B CE463_04670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_04670 PF01751 Toprim domain CE463_04670 PF00986 DNA gyrase B subunit, carboxyl terminus CE463_04675 PF00521 DNA gyrase/topoisomerase IV, subunit A CE463_04675 PF03989 DNA gyrase C-terminal domain, beta-propeller CE463_04735 PF00226 DnaJ domain CE463_04735 PF00684 DnaJ central domain CE463_04735 PF01556 DnaJ C terminal domain CE463_04740 PF07681 DoxX CE463_04745 PF00085 Thioredoxin CE463_04765 PF01553 Acyltransferase CE463_04785 PF01541 GIY-YIG catalytic domain CE463_04800 PF03167 Uracil DNA glycosylase superfamily CE463_04810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_04810 PF03466 LysR substrate binding domain CE463_04815 PF00950 ABC 3 transport family CE463_04820 PF00005 ABC transporter CE463_04825 PF01297 Zinc-uptake complex component A periplasmic CE463_04845 PF01476 LysM domain CE463_04845 PF01551 Peptidase family M23 CE463_04845 PF08525 Opacity-associated protein A N-terminal motif CE463_04850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CE463_04855 PF04222 Protein of unknown function (DUF416) CE463_04870 PF02028 BCCT, betaine/carnitine/choline family transporter CE463_04875 PF01624 MutS domain I CE463_04875 PF05188 MutS domain II CE463_04875 PF05192 MutS domain III CE463_04875 PF00488 MutS domain V CE463_04875 PF05190 MutS family domain IV CE463_04885 PF06953 Arsenical resistance operon trans-acting repressor ArsD CE463_04890 PF02374 Anion-transporting ATPase CE463_04895 PF01758 Sodium Bile acid symporter family CE463_04900 PF03960 ArsC family CE463_04920 PF00311 Phosphoenolpyruvate carboxylase CE463_04925 PF07687 Peptidase dimerisation domain CE463_04925 PF01546 Peptidase family M20/M25/M40 CE463_04930 PF01118 Semialdehyde dehydrogenase, NAD binding domain CE463_04930 PF02774 Semialdehyde dehydrogenase, dimerisation domain CE463_04935 PF00696 Amino acid kinase family CE463_04940 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CE463_04940 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CE463_04945 PF00764 Arginosuccinate synthase CE463_04950 PF00206 Lyase CE463_04950 PF14698 Argininosuccinate lyase C-terminal CE463_04955 PF03466 LysR substrate binding domain CE463_04955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_04965 PF14552 Tautomerase enzyme CE463_04995 PF12464 Maltose acetyltransferase CE463_04995 PF14602 Hexapeptide repeat of succinyl-transferase CE463_05000 PF13194 Domain of unknown function (DUF4010) CE463_05015 PF00528 Binding-protein-dependent transport system inner membrane component CE463_05025 PF00528 Binding-protein-dependent transport system inner membrane component CE463_05030 PF12857 TOBE-like domain CE463_05030 PF00005 ABC transporter CE463_05035 PF03466 LysR substrate binding domain CE463_05035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_05040 PF00291 Pyridoxal-phosphate dependent enzyme CE463_05045 PF00528 Binding-protein-dependent transport system inner membrane component CE463_05050 PF00528 Binding-protein-dependent transport system inner membrane component CE463_05055 PF00005 ABC transporter CE463_05060 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE463_05065 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CE463_05065 PF18416 N-acetylglucosamine binding protein domain 2 CE463_05105 PF14883 Hypothetical glycosyl hydrolase family 13 CE463_05105 PF01522 Polysaccharide deacetylase CE463_05110 PF00535 Glycosyl transferase family 2 CE463_05155 PF11230 Protein of unknown function (DUF3029) CE463_05160 PF04055 Radical SAM superfamily CE463_05170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_05170 PF03466 LysR substrate binding domain CE463_05180 PF00155 Aminotransferase class I and II CE463_05185 PF02583 Metal-sensitive transcriptional repressor CE463_05205 PF00403 Heavy-metal-associated domain CE463_05210 PF08534 Redoxin CE463_05220 PF00270 DEAD/DEAH box helicase CE463_05220 PF00271 Helicase conserved C-terminal domain CE463_05235 PF03372 Endonuclease/Exonuclease/phosphatase family CE463_05240 PF08447 PAS fold CE463_05240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_05255 PF06062 Uncharacterised protein family (UPF0231) CE463_05260 PF17853 GGDEF-like domain CE463_05260 PF05651 Putative sugar diacid recognition CE463_05260 PF13556 PucR C-terminal helix-turn-helix domain CE463_05265 PF02447 GntP family permease CE463_05270 PF02595 Glycerate kinase family CE463_05280 PF00255 Glutathione peroxidase CE463_05285 PF03466 LysR substrate binding domain CE463_05285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_05290 PF01773 Na+ dependent nucleoside transporter N-terminus CE463_05290 PF07670 Nucleoside recognition CE463_05290 PF07662 Na+ dependent nucleoside transporter C-terminus CE463_05295 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CE463_05295 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CE463_05300 PF00472 RF-1 domain CE463_05305 PF00543 Nitrogen regulatory protein P-II CE463_05310 PF13416 Bacterial extracellular solute-binding protein CE463_05320 PF00005 ABC transporter CE463_05320 PF08402 TOBE domain CE463_05325 PF04261 Dyp-type peroxidase family CE463_05330 PF01316 Arginine repressor, DNA binding domain CE463_05330 PF02863 Arginine repressor, C-terminal domain CE463_05335 PF00005 ABC transporter CE463_05340 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE463_05345 PF00528 Binding-protein-dependent transport system inner membrane component CE463_05350 PF00528 Binding-protein-dependent transport system inner membrane component CE463_05355 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CE463_05355 PF00056 lactate/malate dehydrogenase, NAD binding domain CE463_05360 PF08238 Sel1 repeat CE463_05365 PF00175 Oxidoreductase NAD-binding domain CE463_05365 PF00970 Oxidoreductase FAD-binding domain CE463_05365 PF00042 Globin CE463_05370 PF02082 Transcriptional regulator CE463_05375 PF03471 Transporter associated domain CE463_05375 PF00571 CBS domain CE463_05375 PF01595 Cyclin M transmembrane N-terminal domain CE463_05380 PF01578 Cytochrome C assembly protein CE463_05385 PF02881 SRP54-type protein, helical bundle domain CE463_05385 PF02978 Signal peptide binding domain CE463_05385 PF00448 SRP54-type protein, GTPase domain CE463_05390 PF00886 Ribosomal protein S16 CE463_05395 PF05239 PRC-barrel domain CE463_05395 PF01782 RimM N-terminal domain CE463_05400 PF01746 tRNA (Guanine-1)-methyltransferase CE463_05405 PF01245 Ribosomal protein L19 CE463_05415 PF02976 DNA mismatch repair enzyme MutH CE463_05420 PF00293 NUDIX domain CE463_05425 PF02896 PEP-utilising enzyme, TIM barrel domain CE463_05425 PF05524 PEP-utilising enzyme, N-terminal CE463_05425 PF01590 GAF domain CE463_05425 PF00391 PEP-utilising enzyme, mobile domain CE463_05430 PF01790 Prolipoprotein diacylglyceryl transferase CE463_05435 PF00303 Thymidylate synthase CE463_05440 PF06965 Na+/H+ antiporter 1 CE463_05450 PF03466 LysR substrate binding domain CE463_05450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_05455 PF01022 Bacterial regulatory protein, arsR family CE463_05460 PF01649 Ribosomal protein S20 CE463_05465 PF03023 Lipid II flippase MurJ CE463_05470 PF06574 FAD synthetase CE463_05470 PF01687 Riboflavin kinase CE463_05475 PF00133 tRNA synthetases class I (I, L, M and V) CE463_05475 PF06827 Zinc finger found in FPG and IleRS CE463_05475 PF08264 Anticodon-binding domain of tRNA CE463_05480 PF01252 Signal peptidase (SPase) II CE463_05485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CE463_05490 PF02401 LytB protein CE463_05495 PF14245 Type IV pilin PilA CE463_05495 PF07963 Prokaryotic N-terminal methylation motif CE463_05515 PF05567 Neisseria PilC beta-propeller domain CE463_05530 PF02540 NAD synthase CE463_05530 PF00795 Carbon-nitrogen hydrolase CE463_05535 PF00543 Nitrogen regulatory protein P-II CE463_05545 PF02664 S-Ribosylhomocysteinase (LuxS) CE463_05550 PF00990 Diguanylate cyclase, GGDEF domain CE463_05555 PF00575 S1 RNA binding domain CE463_05555 PF00773 RNB domain CE463_05555 PF08206 Ribonuclease B OB domain CE463_05555 PF08461 Ribonuclease R winged-helix domain CE463_05555 PF17876 Cold shock domain CE463_05560 PF00588 SpoU rRNA Methylase family CE463_05560 PF08032 RNA 2'-O ribose methyltransferase substrate binding CE463_05570 PF13673 Acetyltransferase (GNAT) domain CE463_05590 PF02272 DHHA1 domain CE463_05590 PF01411 tRNA synthetases class II (A) CE463_05590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CE463_05595 PF01566 Natural resistance-associated macrophage protein CE463_05600 PF01250 Ribosomal protein S6 CE463_05605 PF01084 Ribosomal protein S18 CE463_05610 PF03948 Ribosomal protein L9, C-terminal domain CE463_05610 PF01281 Ribosomal protein L9, N-terminal domain CE463_05615 PF00175 Oxidoreductase NAD-binding domain CE463_05615 PF00970 Oxidoreductase FAD-binding domain CE463_05640 PF08240 Alcohol dehydrogenase GroES-like domain CE463_05640 PF00107 Zinc-binding dehydrogenase CE463_05645 PF09335 SNARE associated Golgi protein CE463_05650 PF00675 Insulinase (Peptidase family M16) CE463_05650 PF05193 Peptidase M16 inactive domain CE463_05655 PF04262 Glutamate-cysteine ligase CE463_05665 PF00501 AMP-binding enzyme CE463_05675 PF00583 Acetyltransferase (GNAT) family CE463_05675 PF13673 Acetyltransferase (GNAT) domain CE463_05685 PF12592 Protein of unknown function (DUF3763) CE463_05685 PF17868 AAA lid domain CE463_05685 PF07728 AAA domain (dynein-related subfamily) CE463_05690 PF05762 VWA domain containing CoxE-like protein CE463_05700 PF01037 Lrp/AsnC ligand binding domain CE463_05710 PF00990 Diguanylate cyclase, GGDEF domain CE463_05710 PF00072 Response regulator receiver domain CE463_05715 PF00009 Elongation factor Tu GTP binding domain CE463_05715 PF16658 Class II release factor RF3, C-terminal domain CE463_05715 PF03144 Elongation factor Tu domain 2 CE463_05720 PF00583 Acetyltransferase (GNAT) family CE463_05725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CE463_05735 PF03129 Anticodon binding domain CE463_05735 PF04073 Aminoacyl-tRNA editing domain CE463_05735 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CE463_05745 PF01330 RuvA N terminal domain CE463_05745 PF07499 RuvA, C-terminal domain CE463_05750 PF05496 Holliday junction DNA helicase RuvB P-loop domain CE463_05750 PF05491 RuvB C-terminal winged helix domain CE463_05750 PF17864 RuvB AAA lid domain CE463_05755 PF01654 Cytochrome bd terminal oxidase subunit I CE463_05760 PF02322 Cytochrome bd terminal oxidase subunit II CE463_05765 PF08173 Membrane bound YbgT-like protein CE463_05770 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CE463_05775 PF03061 Thioesterase superfamily CE463_05780 PF01618 MotA/TolQ/ExbB proton channel family CE463_05785 PF02472 Biopolymer transport protein ExbD/TolR CE463_05795 PF04052 TolB amino-terminal domain CE463_05795 PF07676 WD40-like Beta Propeller Repeat CE463_05800 PF00691 OmpA family CE463_05805 PF16331 TolA binding protein trimerisation CE463_05805 PF13174 Tetratricopeptide repeat CE463_05870 PF00672 HAMP domain CE463_05870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_05875 PF02445 Quinolinate synthetase A protein CE463_05880 PF01263 Aldose 1-epimerase CE463_05885 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CE463_05885 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CE463_05890 PF02446 4-alpha-glucanotransferase CE463_05895 PF00128 Alpha amylase, catalytic domain CE463_05895 PF02806 Alpha amylase, C-terminal all-beta domain CE463_05895 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CE463_05900 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CE463_05900 PF00128 Alpha amylase, catalytic domain CE463_05905 PF01641 SelR domain CE463_05915 PF07885 Ion channel CE463_05915 PF00027 Cyclic nucleotide-binding domain CE463_05920 PF08239 Bacterial SH3 domain CE463_05925 PF00171 Aldehyde dehydrogenase family CE463_05925 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CE463_05925 PF14850 DNA-binding domain of Proline dehydrogenase CE463_05925 PF01619 Proline dehydrogenase CE463_05930 PF09297 NADH pyrophosphatase zinc ribbon domain CE463_05930 PF00293 NUDIX domain CE463_05935 PF01208 Uroporphyrinogen decarboxylase (URO-D) CE463_05940 PF00719 Inorganic pyrophosphatase CE463_05945 PF02875 Mur ligase family, glutamate ligase domain CE463_05945 PF01225 Mur ligase family, catalytic domain CE463_05945 PF08245 Mur ligase middle domain CE463_05950 PF02441 Flavoprotein CE463_05955 PF00440 Bacterial regulatory proteins, tetR family CE463_05960 PF00156 Phosphoribosyl transferase domain CE463_05965 PF00005 ABC transporter CE463_05970 PF01061 ABC-2 type transporter CE463_05980 PF02569 Pantoate-beta-alanine ligase CE463_05985 PF02548 Ketopantoate hydroxymethyltransferase CE463_05990 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CE463_05995 PF12627 Probable RNA and SrmB- binding site of polymerase A CE463_05995 PF01743 Poly A polymerase head domain CE463_05995 PF12626 Polymerase A arginine-rich C-terminus CE463_06000 PF00749 tRNA synthetases class I (E and Q), catalytic domain CE463_06005 PF01258 Prokaryotic dksA/traR C4-type zinc finger CE463_06010 PF17746 SfsA N-terminal OB domain CE463_06010 PF03749 Sugar fermentation stimulation protein RE domain CE463_06020 PF00270 DEAD/DEAH box helicase CE463_06020 PF08482 ATP-dependent helicase C-terminal CE463_06020 PF00271 Helicase conserved C-terminal domain CE463_06020 PF04408 Helicase associated domain (HA2) CE463_06025 PF14814 Bifunctional transglycosylase second domain CE463_06025 PF00905 Penicillin binding protein transpeptidase domain CE463_06025 PF00912 Transglycosylase CE463_06030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CE463_06035 PF00893 Small Multidrug Resistance protein CE463_06040 PF00893 Small Multidrug Resistance protein CE463_06045 PF03466 LysR substrate binding domain CE463_06045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_06050 PF11849 Domain of unknown function (DUF3369) CE463_06060 PF01569 PAP2 superfamily CE463_06075 PF00202 Aminotransferase class-III CE463_06080 PF00654 Voltage gated chloride channel CE463_06090 PF01521 Iron-sulphur cluster biosynthesis CE463_06120 PF09297 NADH pyrophosphatase zinc ribbon domain CE463_06120 PF00293 NUDIX domain CE463_06120 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CE463_06125 PF16527 Two-component sensor protein CpxA, periplasmic domain CE463_06125 PF00672 HAMP domain CE463_06125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_06125 PF00512 His Kinase A (phospho-acceptor) domain CE463_06130 PF00486 Transcriptional regulatory protein, C terminal CE463_06130 PF00072 Response regulator receiver domain CE463_06135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CE463_06150 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CE463_06150 PF00326 Prolyl oligopeptidase family CE463_06155 PF05170 AsmA family CE463_06200 PF08220 DeoR-like helix-turn-helix domain CE463_06200 PF00455 DeoR C terminal sensor domain CE463_06205 PF03710 Glutamate-ammonia ligase adenylyltransferase CE463_06205 PF08335 GlnD PII-uridylyltransferase CE463_06220 PF00293 NUDIX domain CE463_06225 PF16884 N-terminal domain of oxidoreductase CE463_06225 PF00107 Zinc-binding dehydrogenase CE463_06230 PF02566 OsmC-like protein CE463_06235 PF01047 MarR family CE463_06250 PF01037 Lrp/AsnC ligand binding domain CE463_06260 PF07690 Major Facilitator Superfamily CE463_06280 PF00209 Sodium:neurotransmitter symporter family CE463_06290 PF00209 Sodium:neurotransmitter symporter family CE463_06315 PF00155 Aminotransferase class I and II CE463_06315 PF00392 Bacterial regulatory proteins, gntR family CE463_06325 PF01810 LysE type translocator CE463_06330 PF01177 Asp/Glu/Hydantoin racemase CE463_06340 PF04074 YhcH/YjgK/YiaL CE463_06345 PF00871 Acetokinase family CE463_06350 PF00924 Mechanosensitive ion channel CE463_06355 PF17969 L,D-transpeptidase C-terminal domain CE463_06355 PF03734 L,D-transpeptidase catalytic domain CE463_06360 PF00474 Sodium:solute symporter family CE463_06395 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CE463_06405 PF00005 ABC transporter CE463_06405 PF12848 ABC transporter CE463_06410 PF01380 SIS domain CE463_06410 PF00571 CBS domain CE463_06415 PF01957 NfeD-like C-terminal, partner-binding CE463_06420 PF01145 SPFH domain / Band 7 family CE463_06420 PF16200 C-terminal region of band_7 CE463_06425 PF14824 Sirohaem biosynthesis protein central CE463_06425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CE463_06425 PF10414 Sirohaem synthase dimerisation region CE463_06430 PF01507 Phosphoadenosine phosphosulfate reductase family CE463_06435 PF00009 Elongation factor Tu GTP binding domain CE463_06440 PF02080 TrkA-C domain CE463_06440 PF03600 Citrate transporter CE463_06450 PF01609 Transposase DDE domain CE463_06450 PF13808 DDE_Tnp_1-associated CE463_06500 PF00005 ABC transporter CE463_06515 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CE463_06540 PF00480 ROK family CE463_06545 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CE463_06545 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CE463_06550 PF00162 Phosphoglycerate kinase CE463_06555 PF01116 Fructose-bisphosphate aldolase class-II CE463_06560 PF01266 FAD dependent oxidoreductase CE463_06570 PF02683 Cytochrome C biogenesis protein transmembrane region CE463_06570 PF11412 Disulphide bond corrector protein DsbC CE463_06575 PF03091 CutA1 divalent ion tolerance protein CE463_06595 PF01571 Aminomethyltransferase folate-binding domain CE463_06600 PF03937 Flavinator of succinate dehydrogenase CE463_06610 PF02910 Fumarate reductase flavoprotein C-term CE463_06610 PF00890 FAD binding domain CE463_06615 PF04542 Sigma-70 region 2 CE463_06615 PF08281 Sigma-70, region 4 CE463_06620 PF03872 Anti sigma-E protein RseA, N-terminal domain CE463_06620 PF03873 Anti sigma-E protein RseA, C-terminal domain CE463_06625 PF17188 MucB/RseB C-terminal domain CE463_06625 PF03888 MucB/RseB N-terminal domain CE463_06635 PF00679 Elongation factor G C-terminus CE463_06635 PF06421 GTP-binding protein LepA C-terminus CE463_06635 PF03144 Elongation factor Tu domain 2 CE463_06635 PF00009 Elongation factor Tu GTP binding domain CE463_06640 PF10502 Signal peptidase, peptidase S26 CE463_06645 PF14622 Ribonuclease-III-like CE463_06645 PF00035 Double-stranded RNA binding motif CE463_06650 PF07650 KH domain CE463_06650 PF01926 50S ribosome-binding GTPase CE463_06655 PF11967 Recombination protein O N terminal CE463_06655 PF02565 Recombination protein O C terminal CE463_06660 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CE463_06665 PF01510 N-acetylmuramoyl-L-alanine amidase CE463_06670 PF07308 Protein of unknown function (DUF1456) CE463_06675 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CE463_06675 PF00072 Response regulator receiver domain CE463_06675 PF00672 HAMP domain CE463_06675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_06675 PF00512 His Kinase A (phospho-acceptor) domain CE463_06675 PF01627 Hpt domain CE463_06680 PF01938 TRAM domain CE463_06680 PF05958 tRNA (Uracil-5-)-methyltransferase CE463_06685 PF02824 TGS domain CE463_06685 PF13291 ACT domain CE463_06685 PF04607 Region found in RelA / SpoT proteins CE463_06690 PF03819 MazG nucleotide pyrophosphohydrolase domain CE463_06695 PF00117 Glutamine amidotransferase class-I CE463_06695 PF06418 CTP synthase N-terminus CE463_06700 PF00113 Enolase, C-terminal TIM barrel domain CE463_06700 PF03952 Enolase, N-terminal domain CE463_06705 PF04977 Septum formation initiator CE463_06710 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CE463_06715 PF02542 YgbB family CE463_06720 PF01142 tRNA pseudouridine synthase D (TruD) CE463_06725 PF01975 Survival protein SurE CE463_06735 PF09335 SNARE associated Golgi protein CE463_06740 PF01551 Peptidase family M23 CE463_06740 PF01476 LysM domain CE463_06745 PF00140 Sigma-70 factor, region 1.2 CE463_06745 PF04542 Sigma-70 region 2 CE463_06745 PF04539 Sigma-70 region 3 CE463_06745 PF04545 Sigma-70, region 4 CE463_06750 PF00814 Glycoprotease family CE463_06755 PF01165 Ribosomal protein S21 CE463_06760 PF09424 Yqey-like protein CE463_06765 PF08275 DNA primase catalytic core, N-terminal domain CE463_06765 PF01807 CHC2 zinc finger CE463_06765 PF08278 DNA primase DnaG DnaB-binding CE463_06765 PF10410 DnaB-helicase binding domain of primase CE463_06770 PF04539 Sigma-70 region 3 CE463_06770 PF00140 Sigma-70 factor, region 1.2 CE463_06770 PF04542 Sigma-70 region 2 CE463_06770 PF04546 Sigma-70, non-essential region CE463_06770 PF03979 Sigma-70 factor, region 1.1 CE463_06770 PF04545 Sigma-70, region 4 CE463_06780 PF13358 DDE superfamily endonuclease CE463_06780 PF13592 Winged helix-turn helix CE463_06810 PF02844 Phosphoribosylglycinamide synthetase, N domain CE463_06810 PF02843 Phosphoribosylglycinamide synthetase, C domain CE463_06810 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CE463_06815 PF01808 AICARFT/IMPCHase bienzyme CE463_06815 PF02142 MGS-like domain CE463_06820 PF13411 MerR HTH family regulatory protein CE463_06825 PF01872 RibD C-terminal domain CE463_06830 PF03889 Alternative ribosome-rescue factor A CE463_06835 PF06969 HemN C-terminal domain CE463_06835 PF04055 Radical SAM superfamily CE463_06840 PF01725 Ham1 family CE463_06845 PF07690 Major Facilitator Superfamily CE463_06850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CE463_06850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CE463_06860 PF13302 Acetyltransferase (GNAT) domain CE463_06865 PF13302 Acetyltransferase (GNAT) domain CE463_06870 PF04151 Bacterial pre-peptidase C-terminal domain CE463_06870 PF07504 Fungalysin/Thermolysin Propeptide Motif CE463_06870 PF02868 Thermolysin metallopeptidase, alpha-helical domain CE463_06870 PF01447 Thermolysin metallopeptidase, catalytic domain CE463_06870 PF03413 Peptidase propeptide and YPEB domain CE463_06875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_06875 PF03466 LysR substrate binding domain CE463_06880 PF07690 Major Facilitator Superfamily CE463_06885 PF00267 Gram-negative porin CE463_06890 PF03605 Anaerobic c4-dicarboxylate membrane transporter CE463_06895 PF10415 Fumarase C C-terminus CE463_06895 PF00206 Lyase CE463_06900 PF04186 FxsA cytoplasmic membrane protein CE463_06910 PF00166 Chaperonin 10 Kd subunit CE463_06915 PF00118 TCP-1/cpn60 chaperonin family CE463_06925 PF00990 Diguanylate cyclase, GGDEF domain CE463_06925 PF13188 PAS domain CE463_06925 PF03707 Bacterial signalling protein N terminal repeat CE463_06925 PF00563 EAL domain CE463_06935 PF00849 RNA pseudouridylate synthase CE463_06940 PF00176 SNF2 family N-terminal domain CE463_06940 PF00271 Helicase conserved C-terminal domain CE463_06940 PF18339 RapA N-terminal Tudor like domain 1 CE463_06940 PF12137 RNA polymerase recycling family C-terminal CE463_06940 PF18337 RapA N-terminal Tudor like domain CE463_06970 PF00317 Ribonucleotide reductase, all-alpha domain CE463_06970 PF08343 Ribonucleotide reductase N-terminal CE463_06970 PF02867 Ribonucleotide reductase, barrel domain CE463_06980 PF02562 PhoH-like protein CE463_06980 PF13638 PIN domain CE463_06985 PF00005 ABC transporter CE463_06990 PF00528 Binding-protein-dependent transport system inner membrane component CE463_07010 PF00694 Aconitase C-terminal domain CE463_07015 PF00330 Aconitase family (aconitate hydratase) CE463_07020 PF00180 Isocitrate/isopropylmalate dehydrogenase CE463_07025 PF00682 HMGL-like CE463_07025 PF08502 LeuA allosteric (dimerisation) domain CE463_07035 PF01569 PAP2 superfamily CE463_07050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CE463_07050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CE463_07050 PF00205 Thiamine pyrophosphate enzyme, central domain CE463_07055 PF10369 Small subunit of acetolactate synthase CE463_07060 PF01515 Phosphate acetyl/butaryl transferase CE463_07060 PF07085 DRTGG domain CE463_07065 PF00871 Acetokinase family CE463_07070 PF04217 Protein of unknown function, DUF412 CE463_07075 PF03887 YfbU domain CE463_07080 PF00578 AhpC/TSA family CE463_07085 PF01842 ACT domain CE463_07090 PF00701 Dihydrodipicolinate synthetase family CE463_07095 PF06804 NlpB/DapX lipoprotein CE463_07100 PF01259 SAICAR synthetase CE463_07110 PF03466 LysR substrate binding domain CE463_07110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_07135 PF00989 PAS fold CE463_07135 PF01627 Hpt domain CE463_07135 PF18415 Histidine kinase receptor ArcB trans-membrane domain CE463_07135 PF00072 Response regulator receiver domain CE463_07135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_07135 PF00512 His Kinase A (phospho-acceptor) domain CE463_07140 PF01966 HD domain CE463_07155 PF00563 EAL domain CE463_07155 PF00990 Diguanylate cyclase, GGDEF domain CE463_07155 PF03707 Bacterial signalling protein N terminal repeat CE463_07160 PF00672 HAMP domain CE463_07160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_07160 PF12729 Four helix bundle sensory module for signal transduction CE463_07165 PF02357 Transcription termination factor nusG CE463_07170 PF03180 NLPA lipoprotein CE463_07175 PF00528 Binding-protein-dependent transport system inner membrane component CE463_07180 PF09383 NIL domain CE463_07180 PF00005 ABC transporter CE463_07190 PF00480 ROK family CE463_07195 PF08331 Domain of unknown function (DUF1730) CE463_07200 PF03853 YjeF-related protein N-terminus CE463_07200 PF01256 Carbohydrate kinase CE463_07205 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CE463_07210 PF01520 N-acetylmuramoyl-L-alanine amidase CE463_07215 PF01119 DNA mismatch repair protein, C-terminal domain CE463_07215 PF08676 MutL C terminal dimerisation domain CE463_07225 PF17209 Hfq protein CE463_07230 PF16360 GTP-binding GTPase Middle Region CE463_07230 PF01926 50S ribosome-binding GTPase CE463_07230 PF13167 GTP-binding GTPase N-terminal CE463_07235 PF01145 SPFH domain / Band 7 family CE463_07235 PF12221 Bacterial membrane protein N terminal CE463_07240 PF01145 SPFH domain / Band 7 family CE463_07245 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CE463_07250 PF00348 Polyprenyl synthetase CE463_07255 PF00829 Ribosomal prokaryotic L21 protein CE463_07260 PF01016 Ribosomal L27 protein CE463_07265 PF01926 50S ribosome-binding GTPase CE463_07265 PF01018 GTP1/OBG CE463_07275 PF13193 AMP-binding enzyme C-terminal domain CE463_07275 PF00501 AMP-binding enzyme CE463_07295 PF00296 Luciferase-like monooxygenase CE463_07310 PF00149 Calcineurin-like phosphoesterase CE463_07315 PF04379 ApaG domain CE463_07320 PF00398 Ribosomal RNA adenine dimethylase CE463_07325 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CE463_07330 PF09312 SurA N-terminal domain CE463_07330 PF00639 PPIC-type PPIASE domain CE463_07335 PF04453 LPS transport system D CE463_07335 PF03968 OstA-like protein CE463_07340 PF01636 Phosphotransferase enzyme family CE463_07345 PF00483 Nucleotidyl transferase CE463_07350 PF05099 Tellurite resistance protein TerB CE463_07350 PF00226 DnaJ domain CE463_07355 PF00860 Permease family CE463_07365 PF12848 ABC transporter CE463_07365 PF00005 ABC transporter CE463_07375 PF01370 NAD dependent epimerase/dehydratase family CE463_07385 PF00005 ABC transporter CE463_07390 PF01032 FecCD transport family CE463_07400 PF06228 Haem utilisation ChuX/HutX CE463_07405 PF01243 Pyridoxamine 5'-phosphate oxidase CE463_07425 PF07715 TonB-dependent Receptor Plug Domain CE463_07425 PF00593 TonB dependent receptor CE463_07430 PF12832 MFS_1 like family CE463_07440 PF13443 Cro/C1-type HTH DNA-binding domain CE463_07470 PF12561 ToxR activated gene A lipoprotein domain CE463_07470 PF17945 Beta/Gamma crystallin CE463_07475 PF18416 N-acetylglucosamine binding protein domain 2 CE463_07475 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CE463_07480 PF08241 Methyltransferase domain CE463_07485 PF00027 Cyclic nucleotide-binding domain CE463_07485 PF13545 Crp-like helix-turn-helix domain CE463_07490 PF02566 OsmC-like protein CE463_07505 PF00485 Phosphoribulokinase / Uridine kinase family CE463_07515 PF00892 EamA-like transporter family CE463_07520 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CE463_07525 PF01522 Polysaccharide deacetylase CE463_07535 PF00535 Glycosyl transferase family 2 CE463_07540 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CE463_07550 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CE463_07555 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CE463_07555 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CE463_07555 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CE463_07560 PF06794 Uncharacterised protein family (UPF0270) CE463_07565 PF00360 Phytochrome region CE463_07565 PF00563 EAL domain CE463_07565 PF01590 GAF domain CE463_07565 PF00990 Diguanylate cyclase, GGDEF domain CE463_07570 PF00561 alpha/beta hydrolase fold CE463_07575 PF01584 CheW-like domain CE463_07575 PF00072 Response regulator receiver domain CE463_07585 PF09526 Probable metal-binding protein (DUF2387) CE463_07590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CE463_07595 PF04102 SlyX CE463_07605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CE463_07605 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CE463_07610 PF00158 Sigma-54 interaction domain CE463_07610 PF02954 Bacterial regulatory protein, Fis family CE463_07610 PF00072 Response regulator receiver domain CE463_07630 PF00149 Calcineurin-like phosphoesterase CE463_07630 PF02872 5'-nucleotidase, C-terminal domain CE463_07635 PF00563 EAL domain CE463_07635 PF12792 CSS motif domain associated with EAL CE463_07650 PF00772 DnaB-like helicase N terminal domain CE463_07650 PF03796 DnaB-like helicase C terminal domain CE463_07655 PF03796 DnaB-like helicase C terminal domain CE463_07655 PF00772 DnaB-like helicase N terminal domain CE463_07660 PF01168 Alanine racemase, N-terminal domain CE463_07660 PF00842 Alanine racemase, C-terminal domain CE463_07665 PF12838 4Fe-4S dicluster domain CE463_07675 PF00989 PAS fold CE463_07675 PF00990 Diguanylate cyclase, GGDEF domain CE463_07675 PF01590 GAF domain CE463_07675 PF00563 EAL domain CE463_07690 PF00072 Response regulator receiver domain CE463_07690 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CE463_07690 PF00672 HAMP domain CE463_07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_07690 PF00512 His Kinase A (phospho-acceptor) domain CE463_07690 PF01627 Hpt domain CE463_07720 PF00266 Aminotransferase class-V CE463_07725 PF01339 CheB methylesterase CE463_07725 PF00072 Response regulator receiver domain CE463_07755 PF00816 H-NS histone family CE463_07760 PF00872 Transposase, Mutator family CE463_07770 PF00793 DAHP synthetase I family CE463_07775 PF08021 Siderophore-interacting FAD-binding domain CE463_07775 PF04954 Siderophore-interacting protein CE463_07780 PF02321 Outer membrane efflux protein CE463_07785 PF12704 MacB-like periplasmic core domain CE463_07785 PF00005 ABC transporter CE463_07785 PF02687 FtsX-like permease family CE463_07790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CE463_07800 PF02833 DHHA2 domain CE463_07800 PF01368 DHH family CE463_07805 PF02463 RecF/RecN/SMC N terminal domain CE463_07810 PF01513 ATP-NAD kinase CE463_07815 PF01025 GrpE CE463_07820 PF00012 Hsp70 protein CE463_07825 PF01556 DnaJ C terminal domain CE463_07825 PF00226 DnaJ domain CE463_07825 PF00684 DnaJ central domain CE463_07830 PF11471 Maltoporin periplasmic N-terminal extension CE463_07830 PF02264 LamB porin CE463_07835 PF00294 pfkB family carbohydrate kinase CE463_07840 PF02378 Phosphotransferase system, EIIC CE463_07840 PF00367 phosphotransferase system, EIIB CE463_07845 PF08244 Glycosyl hydrolases family 32 C terminal CE463_07845 PF00251 Glycosyl hydrolases family 32 N-terminal domain CE463_07850 PF00356 Bacterial regulatory proteins, lacI family CE463_07850 PF13407 Periplasmic binding protein domain CE463_07855 PF02308 MgtC family CE463_07875 PF04143 Sulphur transport CE463_07890 PF00873 AcrB/AcrD/AcrF family CE463_07900 PF03707 Bacterial signalling protein N terminal repeat CE463_07900 PF00990 Diguanylate cyclase, GGDEF domain CE463_07900 PF00563 EAL domain CE463_07905 PF10437 Bacterial lipoate protein ligase C-terminus CE463_07905 PF03099 Biotin/lipoate A/B protein ligase family CE463_07935 PF00873 AcrB/AcrD/AcrF family CE463_07940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CE463_07945 PF03372 Endonuclease/Exonuclease/phosphatase family CE463_07955 PF00486 Transcriptional regulatory protein, C terminal CE463_07955 PF00072 Response regulator receiver domain CE463_07960 PF02424 ApbE family CE463_07965 PF00127 Copper binding proteins, plastocyanin/azurin family CE463_07980 PF01156 Inosine-uridine preferring nucleoside hydrolase CE463_08005 PF07690 Major Facilitator Superfamily CE463_08010 PF01040 UbiA prenyltransferase family CE463_08020 PF00115 Cytochrome C and Quinol oxidase polypeptide I CE463_08025 PF06481 COX Aromatic Rich Motif CE463_08025 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CE463_08035 PF00034 Cytochrome c CE463_08035 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CE463_08060 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CE463_08060 PF00356 Bacterial regulatory proteins, lacI family CE463_08065 PF02378 Phosphotransferase system, EIIC CE463_08065 PF00367 phosphotransferase system, EIIB CE463_08085 PF01609 Transposase DDE domain CE463_08085 PF13808 DDE_Tnp_1-associated CE463_08110 PF01238 Phosphomannose isomerase type I CE463_08115 PF12833 Helix-turn-helix domain CE463_08120 PF00180 Isocitrate/isopropylmalate dehydrogenase CE463_08165 PF13356 Arm DNA-binding domain CE463_08165 PF00589 Phage integrase family CE463_08175 PF01668 SmpB protein CE463_08180 PF03364 Polyketide cyclase / dehydrase and lipid transport CE463_08190 PF13460 NAD(P)H-binding CE463_08195 PF04355 SmpA / OmlA family CE463_08225 PF13629 Pilus formation protein N terminal region CE463_08225 PF04972 BON domain CE463_08225 PF00263 Bacterial type II and III secretion system protein CE463_08235 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CE463_08240 PF00437 Type II/IV secretion system protein CE463_08275 PF00465 Iron-containing alcohol dehydrogenase CE463_08280 PF01048 Phosphorylase superfamily CE463_08285 PF00849 RNA pseudouridylate synthase CE463_08290 PF01156 Inosine-uridine preferring nucleoside hydrolase CE463_08305 PF07509 Protein of unknown function (DUF1523) CE463_08310 PF12729 Four helix bundle sensory module for signal transduction CE463_08310 PF00672 HAMP domain CE463_08310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_08315 PF01810 LysE type translocator CE463_08325 PF13808 DDE_Tnp_1-associated CE463_08325 PF01609 Transposase DDE domain CE463_08330 PF02264 LamB porin CE463_08335 PF07148 Maltose operon periplasmic protein precursor (MalM) CE463_08340 PF02378 Phosphotransferase system, EIIC CE463_08340 PF00367 phosphotransferase system, EIIB CE463_08345 PF11944 Protein of unknown function (DUF3461) CE463_08350 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CE463_08350 PF14602 Hexapeptide repeat of succinyl-transferase CE463_08350 PF00132 Bacterial transferase hexapeptide (six repeats) CE463_08360 PF00557 Metallopeptidase family M24 CE463_08365 PF00318 Ribosomal protein S2 CE463_08370 PF00889 Elongation factor TS CE463_08375 PF00696 Amino acid kinase family CE463_08380 PF01765 Ribosome recycling factor CE463_08385 PF01255 Putative undecaprenyl diphosphate synthase CE463_08395 PF13288 DXP reductoisomerase C-terminal domain CE463_08395 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CE463_08395 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CE463_08400 PF02163 Peptidase family M50 CE463_08400 PF17820 PDZ domain CE463_08405 PF01103 Surface antigen CE463_08405 PF07244 Surface antigen variable number repeat CE463_08410 PF03938 Outer membrane protein (OmpH-like) CE463_08415 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CE463_08415 PF00132 Bacterial transferase hexapeptide (six repeats) CE463_08420 PF07977 FabA-like domain CE463_08425 PF00132 Bacterial transferase hexapeptide (six repeats) CE463_08425 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CE463_08430 PF02684 Lipid-A-disaccharide synthetase CE463_08435 PF01351 Ribonuclease HII CE463_08440 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CE463_08440 PF01336 OB-fold nucleic acid binding domain CE463_08440 PF07733 Bacterial DNA polymerase III alpha NTPase domain CE463_08440 PF14579 Helix-hairpin-helix motif CE463_08440 PF02811 PHP domain CE463_08445 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CE463_08450 PF18500 CadC C-terminal domain 1 CE463_08450 PF00486 Transcriptional regulatory protein, C terminal CE463_08455 PF13520 Amino acid permease CE463_08460 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CE463_08460 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CE463_08460 PF01276 Orn/Lys/Arg decarboxylase, major domain CE463_08465 PF08543 Phosphomethylpyrimidine kinase CE463_08475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_08475 PF03466 LysR substrate binding domain CE463_08485 PF13520 Amino acid permease CE463_08490 PF13302 Acetyltransferase (GNAT) domain CE463_08495 PF00005 ABC transporter CE463_08495 PF12848 ABC transporter CE463_08495 PF16326 ABC transporter C-terminal domain CE463_08505 PF05649 Peptidase family M13 CE463_08505 PF01431 Peptidase family M13 CE463_08510 PF09179 TilS substrate binding domain CE463_08510 PF01171 PP-loop family CE463_08510 PF11734 TilS substrate C-terminal domain CE463_08515 PF00990 Diguanylate cyclase, GGDEF domain CE463_08520 PF02254 TrkA-N domain CE463_08520 PF02080 TrkA-C domain CE463_08520 PF00999 Sodium/hydrogen exchanger family CE463_08540 PF00072 Response regulator receiver domain CE463_08540 PF00196 Bacterial regulatory proteins, luxR family CE463_08550 PF00128 Alpha amylase, catalytic domain CE463_08560 PF01161 Phosphatidylethanolamine-binding protein CE463_08570 PF03466 LysR substrate binding domain CE463_08570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_08580 PF00155 Aminotransferase class I and II CE463_08585 PF07690 Major Facilitator Superfamily CE463_08590 PF03466 LysR substrate binding domain CE463_08590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_08595 PF00106 short chain dehydrogenase CE463_08600 PF01343 Peptidase family S49 CE463_08600 PF08496 Peptidase family S49 N-terminal CE463_08605 PF04996 Succinylarginine dihydrolase CE463_08610 PF01131 DNA topoisomerase CE463_08610 PF01396 Topoisomerase DNA binding C4 zinc finger CE463_08610 PF01751 Toprim domain CE463_08610 PF08272 Topoisomerase I zinc-ribbon-like CE463_08620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_08620 PF08447 PAS fold CE463_08625 PF02838 Glycosyl hydrolase family 20, domain 2 CE463_08625 PF00728 Glycosyl hydrolase family 20, catalytic domain CE463_08630 PF01869 BadF/BadG/BcrA/BcrD ATPase family CE463_08640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CE463_08640 PF00005 ABC transporter CE463_08645 PF00005 ABC transporter CE463_08645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CE463_08650 PF00528 Binding-protein-dependent transport system inner membrane component CE463_08650 PF12911 N-terminal TM domain of oligopeptide transport permease C CE463_08655 PF00528 Binding-protein-dependent transport system inner membrane component CE463_08660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CE463_08685 PF10725 Protein of unknown function (DUF2517) CE463_08695 PF08447 PAS fold CE463_08695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_08695 PF13426 PAS domain CE463_08705 PF04632 Fusaric acid resistance protein family CE463_08710 PF03453 MoeA N-terminal region (domain I and II) CE463_08710 PF00994 Probable molybdopterin binding domain CE463_08710 PF03454 MoeA C-terminal region (domain IV) CE463_08715 PF12804 MobA-like NTP transferase domain CE463_08720 PF00005 ABC transporter CE463_08725 PF00528 Binding-protein-dependent transport system inner membrane component CE463_08730 PF12849 PBP superfamily domain CE463_08740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_08740 PF00512 His Kinase A (phospho-acceptor) domain CE463_08740 PF00989 PAS fold CE463_08750 PF02634 FdhD/NarQ family CE463_08765 PF01609 Transposase DDE domain CE463_08765 PF13808 DDE_Tnp_1-associated CE463_08795 PF13808 DDE_Tnp_1-associated CE463_08795 PF01609 Transposase DDE domain CE463_08825 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CE463_08825 PF12838 4Fe-4S dicluster domain CE463_08825 PF00384 Molybdopterin oxidoreductase CE463_08825 PF01568 Molydopterin dinucleotide binding domain CE463_08825 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CE463_08830 PF13247 4Fe-4S dicluster domain CE463_08845 PF03949 Malic enzyme, NAD binding domain CE463_08845 PF00390 Malic enzyme, N-terminal domain CE463_08850 PF00860 Permease family CE463_08855 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE463_08875 PF03949 Malic enzyme, NAD binding domain CE463_08875 PF00390 Malic enzyme, N-terminal domain CE463_08880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_08880 PF00989 PAS fold CE463_08880 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CE463_08880 PF17203 Single cache domain 3 CE463_08885 PF00072 Response regulator receiver domain CE463_08885 PF12431 Transcriptional regulator CE463_08895 PF00248 Aldo/keto reductase family CE463_08905 PF00892 EamA-like transporter family CE463_08915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_08915 PF03466 LysR substrate binding domain CE463_08925 PF12697 Alpha/beta hydrolase family CE463_08930 PF01361 Tautomerase enzyme CE463_08935 PF00171 Aldehyde dehydrogenase family CE463_08940 PF02954 Bacterial regulatory protein, Fis family CE463_08940 PF00158 Sigma-54 interaction domain CE463_08940 PF01590 GAF domain CE463_08945 PF00990 Diguanylate cyclase, GGDEF domain CE463_08945 PF07694 5TMR of 5TMR-LYT CE463_08950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CE463_08955 PF00486 Transcriptional regulatory protein, C terminal CE463_08955 PF00072 Response regulator receiver domain CE463_08960 PF11808 Phosphate regulon sensor protein PhoR CE463_08960 PF00989 PAS fold CE463_08960 PF00512 His Kinase A (phospho-acceptor) domain CE463_08960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_08965 PF12849 PBP superfamily domain CE463_08970 PF01435 Peptidase family M48 CE463_08980 PF00480 ROK family CE463_08985 PF03932 CutC family CE463_08990 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CE463_08990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CE463_08995 PF00005 ABC transporter CE463_09015 PF00293 NUDIX domain CE463_09025 PF08534 Redoxin CE463_09025 PF00462 Glutaredoxin CE463_09030 PF01699 Sodium/calcium exchanger protein CE463_09035 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CE463_09035 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CE463_09040 PF01235 Sodium:alanine symporter family CE463_09050 PF00860 Permease family CE463_09055 PF00990 Diguanylate cyclase, GGDEF domain CE463_09055 PF00072 Response regulator receiver domain CE463_09060 PF10692 Protein of unknown function (DUF2498) CE463_09065 PF01554 MatE CE463_09070 PF12833 Helix-turn-helix domain CE463_09075 PF00390 Malic enzyme, N-terminal domain CE463_09075 PF03949 Malic enzyme, NAD binding domain CE463_09080 PF01389 OmpA-like transmembrane domain CE463_09080 PF00691 OmpA family CE463_09085 PF01389 OmpA-like transmembrane domain CE463_09085 PF00691 OmpA family CE463_09090 PF00691 OmpA family CE463_09090 PF01389 OmpA-like transmembrane domain CE463_09110 PF00209 Sodium:neurotransmitter symporter family CE463_09115 PF01734 Patatin-like phospholipase CE463_09120 PF00990 Diguanylate cyclase, GGDEF domain CE463_09120 PF05230 MASE2 domain CE463_09125 PF13533 Biotin-lipoyl like CE463_09140 PF11842 Domain of unknown function (DUF3362) CE463_09140 PF08497 Radical SAM N-terminal CE463_09140 PF04055 Radical SAM superfamily CE463_09150 PF13592 Winged helix-turn helix CE463_09150 PF13358 DDE superfamily endonuclease CE463_09155 PF13808 DDE_Tnp_1-associated CE463_09155 PF01609 Transposase DDE domain CE463_09170 PF02075 Crossover junction endodeoxyribonuclease RuvC CE463_09175 PF00230 Major intrinsic protein CE463_09180 PF10145 Phage-related minor tail protein CE463_09180 PF01464 Transglycosylase SLT domain CE463_09180 PF01551 Peptidase family M23 CE463_09185 PF00128 Alpha amylase, catalytic domain CE463_09190 PF01551 Peptidase family M23 CE463_09205 PF13396 Phospholipase_D-nuclease N-terminal CE463_09205 PF13091 PLD-like domain CE463_09215 PF01842 ACT domain CE463_09215 PF00551 Formyl transferase CE463_09220 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CE463_09235 PF01648 4'-phosphopantetheinyl transferase superfamily CE463_09240 PF00877 NlpC/P60 family CE463_09245 PF05971 RNA methyltransferase CE463_09250 PF01575 MaoC like domain CE463_09260 PF17969 L,D-transpeptidase C-terminal domain CE463_09260 PF03734 L,D-transpeptidase catalytic domain CE463_09260 PF01476 LysM domain CE463_09290 PF00665 Integrase core domain CE463_09290 PF13276 HTH-like domain CE463_09290 PF13333 Integrase core domain CE463_09310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CE463_09310 PF02770 Acyl-CoA dehydrogenase, middle domain CE463_09310 PF09317 Domain of unknown function (DUF1974) CE463_09310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CE463_09315 PF00873 AcrB/AcrD/AcrF family CE463_09325 PF02887 Pyruvate kinase, alpha/beta domain CE463_09325 PF00224 Pyruvate kinase, barrel domain CE463_09330 PF01418 Helix-turn-helix domain, rpiR family CE463_09330 PF01380 SIS domain CE463_09335 PF02685 Glucokinase CE463_09355 PF00919 Uncharacterized protein family UPF0004 CE463_09355 PF04055 Radical SAM superfamily CE463_09355 PF18693 TRAM domain CE463_09360 PF00072 Response regulator receiver domain CE463_09375 PF02001 Protein of unknown function DUF134 CE463_09405 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CE463_09405 PF02154 Flagellar motor switch protein FliM CE463_09410 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CE463_09415 PF04347 Flagellar biosynthesis protein, FliO CE463_09420 PF00813 FliP family CE463_09425 PF01313 Bacterial export proteins, family 3 CE463_09430 PF01311 Bacterial export proteins, family 1 CE463_09435 PF01312 FlhB HrpN YscU SpaS Family CE463_09440 PF00771 FHIPEP family CE463_09445 PF00448 SRP54-type protein, GTPase domain CE463_09450 PF10609 NUBPL iron-transfer P-loop NTPase CE463_09455 PF04539 Sigma-70 region 3 CE463_09455 PF04542 Sigma-70 region 2 CE463_09455 PF04545 Sigma-70, region 4 CE463_09460 PF00072 Response regulator receiver domain CE463_09465 PF04344 Chemotaxis phosphatase, CheZ CE463_09470 PF13592 Winged helix-turn helix CE463_09470 PF13358 DDE superfamily endonuclease CE463_09475 PF00578 AhpC/TSA family CE463_09475 PF10417 C-terminal domain of 1-Cys peroxiredoxin CE463_09495 PF08003 Protein of unknown function (DUF1698) CE463_09500 PF13649 Methyltransferase domain CE463_09520 PF00152 tRNA synthetases class II (D, K and N) CE463_09520 PF02938 GAD domain CE463_09520 PF01336 OB-fold nucleic acid binding domain CE463_09525 PF01709 Transcriptional regulator CE463_09530 PF08019 Phosphoethanolamine transferase EptA/EptB CE463_09530 PF00884 Sulfatase CE463_09535 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain CE463_09535 PF02838 Glycosyl hydrolase family 20, domain 2 CE463_09535 PF00728 Glycosyl hydrolase family 20, catalytic domain CE463_09535 PF03173 Putative carbohydrate binding domain CE463_09555 PF00550 Phosphopantetheine attachment site CE463_09555 PF00668 Condensation domain CE463_09555 PF13193 AMP-binding enzyme C-terminal domain CE463_09555 PF00550 Phosphopantetheine attachment site CE463_09555 PF00668 Condensation domain CE463_09555 PF13193 AMP-binding enzyme C-terminal domain CE463_09555 PF00501 AMP-binding enzyme CE463_09555 PF00501 AMP-binding enzyme CE463_09565 PF13737 Transposase DDE domain CE463_09585 PF01047 MarR family CE463_09585 PF00480 ROK family CE463_09590 PF01979 Amidohydrolase family CE463_09595 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CE463_09610 PF02838 Glycosyl hydrolase family 20, domain 2 CE463_09610 PF00728 Glycosyl hydrolase family 20, catalytic domain CE463_09610 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain CE463_09610 PF03173 Putative carbohydrate binding domain CE463_09615 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CE463_09615 PF00749 tRNA synthetases class I (E and Q), catalytic domain CE463_09620 PF01475 Ferric uptake regulator family CE463_09630 PF00258 Flavodoxin CE463_09635 PF01402 Ribbon-helix-helix protein, copG family CE463_09645 PF12697 Alpha/beta hydrolase family CE463_09650 PF17206 SeqA protein N-terminal domain CE463_09650 PF03925 SeqA protein C-terminal domain CE463_09655 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CE463_09655 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CE463_09655 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CE463_09655 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CE463_09665 PF01047 MarR family CE463_09670 PF13406 Transglycosylase SLT domain CE463_09675 PF01066 CDP-alcohol phosphatidyltransferase CE463_09680 PF00005 ABC transporter CE463_09685 PF00528 Binding-protein-dependent transport system inner membrane component CE463_09690 PF13416 Bacterial extracellular solute-binding protein CE463_09695 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE463_09695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CE463_09695 PF00403 Heavy-metal-associated domain CE463_09700 PF02627 Carboxymuconolactone decarboxylase family CE463_09710 PF01625 Peptide methionine sulfoxide reductase CE463_09730 PF17243 POTRA domain TamA domain 1 CE463_09730 PF07244 Surface antigen variable number repeat CE463_09730 PF01103 Surface antigen CE463_09735 PF04357 TamB, inner membrane protein subunit of TAM complex CE463_09750 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CE463_09755 PF03707 Bacterial signalling protein N terminal repeat CE463_09755 PF00990 Diguanylate cyclase, GGDEF domain CE463_09755 PF00563 EAL domain CE463_09760 PF14718 Soluble lytic murein transglycosylase L domain CE463_09760 PF01464 Transglycosylase SLT domain CE463_09765 PF00356 Bacterial regulatory proteins, lacI family CE463_09775 PF03061 Thioesterase superfamily CE463_09785 PF03372 Endonuclease/Exonuclease/phosphatase family CE463_09790 PF01464 Transglycosylase SLT domain CE463_09790 PF01476 LysM domain CE463_09795 PF16123 Hydroxyacylglutathione hydrolase C-terminus CE463_09795 PF00753 Metallo-beta-lactamase superfamily CE463_09800 PF08241 Methyltransferase domain CE463_09805 PF00075 RNase H CE463_09810 PF00929 Exonuclease CE463_09820 PF11849 Domain of unknown function (DUF3369) CE463_09825 PF09317 Domain of unknown function (DUF1974) CE463_09825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CE463_09825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CE463_09825 PF02770 Acyl-CoA dehydrogenase, middle domain CE463_09830 PF13580 SIS domain CE463_09835 PF13230 Glutamine amidotransferases class-II CE463_09845 PF01933 Uncharacterised protein family UPF0052 CE463_09855 PF00072 Response regulator receiver domain CE463_09855 PF00512 His Kinase A (phospho-acceptor) domain CE463_09855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_09855 PF09456 RcsC Alpha-Beta-Loop (ABL) CE463_09865 PF00196 Bacterial regulatory proteins, luxR family CE463_09865 PF00072 Response regulator receiver domain CE463_09870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_09870 PF07730 Histidine kinase CE463_09870 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CE463_09870 PF00672 HAMP domain CE463_09875 PF06463 Molybdenum Cofactor Synthesis C CE463_09875 PF04055 Radical SAM superfamily CE463_09880 PF13187 4Fe-4S dicluster domain CE463_09880 PF12838 4Fe-4S dicluster domain CE463_09890 PF01568 Molydopterin dinucleotide binding domain CE463_09890 PF10518 TAT (twin-arginine translocation) pathway signal sequence CE463_09890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CE463_09890 PF00384 Molybdopterin oxidoreductase CE463_09895 PF12800 4Fe-4S binding domain CE463_09895 PF12838 4Fe-4S dicluster domain CE463_09900 PF12837 4Fe-4S binding domain CE463_09900 PF12801 4Fe-4S binding domain CE463_09905 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CE463_09910 PF03264 NapC/NirT cytochrome c family, N-terminal region CE463_09915 PF00994 Probable molybdopterin binding domain CE463_09920 PF01967 MoaC family CE463_09925 PF02597 ThiS family CE463_09930 PF02391 MoaE protein CE463_09940 PF00528 Binding-protein-dependent transport system inner membrane component CE463_09945 PF03459 TOBE domain CE463_09945 PF00005 ABC transporter CE463_09950 PF00561 alpha/beta hydrolase fold CE463_09955 PF06406 StbA protein CE463_09965 PF06291 Bor protein CE463_09970 PF06291 Bor protein CE463_09975 PF00899 ThiF family CE463_09980 PF03453 MoeA N-terminal region (domain I and II) CE463_09980 PF03454 MoeA C-terminal region (domain IV) CE463_09980 PF00994 Probable molybdopterin binding domain CE463_09985 PF01227 GTP cyclohydrolase I CE463_09990 PF00672 HAMP domain CE463_09990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_09990 PF17200 Single Cache domain 2 CE463_09995 PF01268 Formate--tetrahydrofolate ligase CE463_10005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_10005 PF03466 LysR substrate binding domain CE463_10010 PF04264 YceI-like domain CE463_10035 PF01546 Peptidase family M20/M25/M40 CE463_10035 PF07687 Peptidase dimerisation domain CE463_10045 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CE463_10045 PF17944 Arginine decarboxylase C-terminal helical extension CE463_10045 PF17810 Arginine decarboxylase helical bundle domain CE463_10060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CE463_10070 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CE463_10070 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CE463_10075 PF01479 S4 domain CE463_10075 PF00849 RNA pseudouridylate synthase CE463_10080 PF07690 Major Facilitator Superfamily CE463_10090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_10090 PF03466 LysR substrate binding domain CE463_10100 PF10689 Protein of unknown function (DUF2496) CE463_10110 PF04391 Protein of unknown function (DUF533) CE463_10115 PF00392 Bacterial regulatory proteins, gntR family CE463_10115 PF00155 Aminotransferase class I and II CE463_10120 PF01654 Cytochrome bd terminal oxidase subunit I CE463_10145 PF07690 Major Facilitator Superfamily CE463_10150 PF00248 Aldo/keto reductase family CE463_10155 PF03992 Antibiotic biosynthesis monooxygenase CE463_10180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_10180 PF03466 LysR substrate binding domain CE463_10185 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CE463_10185 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CE463_10190 PF00230 Major intrinsic protein CE463_10195 PF07690 Major Facilitator Superfamily CE463_10200 PF08220 DeoR-like helix-turn-helix domain CE463_10200 PF00455 DeoR C terminal sensor domain CE463_10210 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CE463_10210 PF01266 FAD dependent oxidoreductase CE463_10215 PF03009 Glycerophosphoryl diester phosphodiesterase family CE463_10220 PF00793 DAHP synthetase I family CE463_10225 PF02153 Prephenate dehydrogenase CE463_10225 PF01817 Chorismate mutase type II CE463_10230 PF03466 LysR substrate binding domain CE463_10230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_10235 PF04219 Protein of unknown function, DUF CE463_10240 PF03974 Ecotin CE463_10260 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CE463_10260 PF00326 Prolyl oligopeptidase family CE463_10280 PF00884 Sulfatase CE463_10280 PF11893 Domain of unknown function (DUF3413) CE463_10285 PF07208 Protein of unknown function (DUF1414) CE463_10290 PF04245 37-kD nucleoid-associated bacterial protein CE463_10295 PF01547 Bacterial extracellular solute-binding protein CE463_10300 PF00528 Binding-protein-dependent transport system inner membrane component CE463_10300 PF14785 Maltose transport system permease protein MalF P2 domain CE463_10305 PF00528 Binding-protein-dependent transport system inner membrane component CE463_10310 PF08402 TOBE domain CE463_10310 PF00005 ABC transporter CE463_10315 PF03976 Polyphosphate kinase 2 (PPK2) CE463_10320 PF00561 alpha/beta hydrolase fold CE463_10325 PF01594 AI-2E family transporter CE463_10330 PF01206 Sulfurtransferase TusA CE463_10335 PF01435 Peptidase family M48 CE463_10335 PF07720 Tetratricopeptide repeat CE463_10345 PF03960 ArsC family CE463_10360 PF03956 Lysine exporter LysO CE463_10365 PF00005 ABC transporter CE463_10370 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE463_10375 PF00528 Binding-protein-dependent transport system inner membrane component CE463_10380 PF00528 Binding-protein-dependent transport system inner membrane component CE463_10395 PF04055 Radical SAM superfamily CE463_10400 PF00563 EAL domain CE463_10400 PF03707 Bacterial signalling protein N terminal repeat CE463_10400 PF00990 Diguanylate cyclase, GGDEF domain CE463_10405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CE463_10405 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE463_10410 PF07678 A-macroglobulin TED domain CE463_10410 PF01835 MG2 domain CE463_10410 PF17962 Bacterial macroglobulin domain 6 CE463_10410 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CE463_10410 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CE463_10410 PF07703 Alpha-2-macroglobulin bait region domain CE463_10410 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CE463_10410 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CE463_10410 PF00207 Alpha-2-macroglobulin family CE463_10415 PF06832 Penicillin-Binding Protein C-terminus Family CE463_10415 PF00905 Penicillin binding protein transpeptidase domain CE463_10415 PF00912 Transglycosylase CE463_10425 PF02926 THUMP domain CE463_10425 PF02568 Thiamine biosynthesis protein (ThiI) CE463_10435 PF03458 UPF0126 domain CE463_10440 PF00669 Bacterial flagellin N-terminal helical region CE463_10440 PF07196 Flagellin hook IN motif CE463_10440 PF00700 Bacterial flagellin C-terminal helical region CE463_10455 PF02465 Flagellar hook-associated protein 2 N-terminus CE463_10455 PF07195 Flagellar hook-associated protein 2 C-terminus CE463_10455 PF07196 Flagellin hook IN motif CE463_10460 PF02561 Flagellar protein FliS CE463_10470 PF01497 Periplasmic binding protein CE463_10480 PF01048 Phosphorylase superfamily CE463_10490 PF02535 ZIP Zinc transporter CE463_10495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_10495 PF00672 HAMP domain CE463_10500 PF00459 Inositol monophosphatase family CE463_10510 PF00043 Glutathione S-transferase, C-terminal domain CE463_10510 PF02798 Glutathione S-transferase, N-terminal domain CE463_10520 PF00528 Binding-protein-dependent transport system inner membrane component CE463_10525 PF00528 Binding-protein-dependent transport system inner membrane component CE463_10525 PF12911 N-terminal TM domain of oligopeptide transport permease C CE463_10530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CE463_10530 PF00005 ABC transporter CE463_10535 PF07690 Major Facilitator Superfamily CE463_10540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_10540 PF03466 LysR substrate binding domain CE463_10545 PF02634 FdhD/NarQ family CE463_10550 PF00384 Molybdopterin oxidoreductase CE463_10560 PF05164 Cell division protein ZapA CE463_10565 PF03695 Uncharacterised protein family (UPF0149) CE463_10570 PF01494 FAD binding domain CE463_10575 PF01494 FAD binding domain CE463_10580 PF01571 Aminomethyltransferase folate-binding domain CE463_10580 PF08669 Glycine cleavage T-protein C-terminal barrel domain CE463_10585 PF01597 Glycine cleavage H-protein CE463_10590 PF02347 Glycine cleavage system P-protein CE463_10600 PF07690 Major Facilitator Superfamily CE463_10605 PF13192 Thioredoxin domain CE463_10605 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE463_10610 PF00578 AhpC/TSA family CE463_10610 PF10417 C-terminal domain of 1-Cys peroxiredoxin CE463_10615 PF00571 CBS domain CE463_10620 PF02547 Queuosine biosynthesis protein CE463_10625 PF01702 Queuine tRNA-ribosyltransferase CE463_10630 PF02699 Preprotein translocase subunit CE463_10635 PF13721 SecD export protein N-terminal TM region CE463_10635 PF02355 Protein export membrane protein CE463_10635 PF07549 SecD/SecF GG Motif CE463_10640 PF02355 Protein export membrane protein CE463_10640 PF07549 SecD/SecF GG Motif CE463_10645 PF00581 Rhodanese-like domain CE463_10650 PF13181 Tetratricopeptide repeat CE463_10650 PF07719 Tetratricopeptide repeat CE463_10675 PF00588 SpoU rRNA Methylase family CE463_10680 PF02082 Transcriptional regulator CE463_10685 PF00266 Aminotransferase class-V CE463_10690 PF01592 NifU-like N terminal domain CE463_10695 PF01521 Iron-sulphur cluster biosynthesis CE463_10700 PF07743 HSCB C-terminal oligomerisation domain CE463_10700 PF00226 DnaJ domain CE463_10705 PF00012 Hsp70 protein CE463_10710 PF00111 2Fe-2S iron-sulfur cluster binding domain CE463_10715 PF00883 Cytosol aminopeptidase family, catalytic domain CE463_10715 PF12404 Peptidase CE463_10720 PF00883 Cytosol aminopeptidase family, catalytic domain CE463_10720 PF12404 Peptidase CE463_10725 PF00334 Nucleoside diphosphate kinase CE463_10730 PF04055 Radical SAM superfamily CE463_10740 PF13464 Domain of unknown function (DUF4115) CE463_10745 PF04551 GcpE protein CE463_10750 PF13393 Histidyl-tRNA synthetase CE463_10750 PF03129 Anticodon binding domain CE463_10755 PF09976 Tetratricopeptide repeat-like domain CE463_10760 PF13360 PQQ-like domain CE463_10765 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CE463_10765 PF01926 50S ribosome-binding GTPase CE463_10770 PF07191 zinc-ribbons CE463_10775 PF01464 Transglycosylase SLT domain CE463_10775 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE463_10780 PF02769 AIR synthase related protein, C-terminal domain CE463_10780 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CE463_10780 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CE463_10790 PF05661 Protein of unknown function (DUF808) CE463_10795 PF08439 Oligopeptidase F CE463_10795 PF01432 Peptidase family M3 CE463_10805 PF01609 Transposase DDE domain CE463_10805 PF13808 DDE_Tnp_1-associated CE463_10830 PF16199 Radical_SAM C-terminal domain CE463_10830 PF04055 Radical SAM superfamily CE463_10835 PF03412 Peptidase C39 family CE463_10835 PF00005 ABC transporter CE463_10835 PF00664 ABC transporter transmembrane region CE463_10900 PF07055 Enoyl reductase FAD binding domain CE463_10900 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CE463_10900 PF12241 Trans-2-enoyl-CoA reductase catalytic region CE463_10905 PF03606 C4-dicarboxylate anaerobic carrier CE463_10910 PF00155 Aminotransferase class I and II CE463_10920 PF00462 Glutaredoxin CE463_10925 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CE463_10930 PF00271 Helicase conserved C-terminal domain CE463_10930 PF04851 Type III restriction enzyme, res subunit CE463_10935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CE463_10935 PF00529 HlyD membrane-fusion protein of T1SS CE463_10940 PF11742 Protein of unknown function (DUF3302) CE463_10945 PF02554 Carbon starvation protein CstA CE463_10950 PF04397 LytTr DNA-binding domain CE463_10950 PF00072 Response regulator receiver domain CE463_10955 PF07694 5TMR of 5TMR-LYT CE463_10955 PF06580 Histidine kinase CE463_10975 PF00171 Aldehyde dehydrogenase family CE463_10975 PF00465 Iron-containing alcohol dehydrogenase CE463_10985 PF01914 MarC family integral membrane protein CE463_10990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CE463_10995 PF00528 Binding-protein-dependent transport system inner membrane component CE463_11000 PF12911 N-terminal TM domain of oligopeptide transport permease C CE463_11000 PF00528 Binding-protein-dependent transport system inner membrane component CE463_11005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CE463_11005 PF00005 ABC transporter CE463_11015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CE463_11015 PF00005 ABC transporter CE463_11020 PF03741 Integral membrane protein TerC family CE463_11025 PF00842 Alanine racemase, C-terminal domain CE463_11025 PF01168 Alanine racemase, N-terminal domain CE463_11035 PF00375 Sodium:dicarboxylate symporter family CE463_11050 PF01979 Amidohydrolase family CE463_11060 PF00672 HAMP domain CE463_11060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_11065 PF01230 HIT domain CE463_11100 PF02355 Protein export membrane protein CE463_11100 PF13721 SecD export protein N-terminal TM region CE463_11100 PF07549 SecD/SecF GG Motif CE463_11105 PF02355 Protein export membrane protein CE463_11105 PF07549 SecD/SecF GG Motif CE463_11110 PF13426 PAS domain CE463_11110 PF08447 PAS fold CE463_11110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_11120 PF13808 DDE_Tnp_1-associated CE463_11120 PF01609 Transposase DDE domain CE463_11135 PF00361 Proton-conducting membrane transporter CE463_11140 PF00361 Proton-conducting membrane transporter CE463_11145 PF00361 Proton-conducting membrane transporter CE463_11145 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CE463_11150 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CE463_11155 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CE463_11160 PF12838 4Fe-4S dicluster domain CE463_11165 PF00146 NADH dehydrogenase CE463_11170 PF00384 Molybdopterin oxidoreductase CE463_11170 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CE463_11170 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CE463_11175 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CE463_11175 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CE463_11185 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CE463_11185 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CE463_11190 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CE463_11195 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CE463_11200 PF00691 OmpA family CE463_11200 PF13677 Membrane MotB of proton-channel complex MotA/MotB CE463_11220 PF04536 TPM domain CE463_11230 PF03411 Penicillin-insensitive murein endopeptidase CE463_11235 PF00528 Binding-protein-dependent transport system inner membrane component CE463_11240 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE463_11245 PF00528 Binding-protein-dependent transport system inner membrane component CE463_11250 PF00005 ABC transporter CE463_11260 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CE463_11265 PF00248 Aldo/keto reductase family CE463_11275 PF00106 short chain dehydrogenase CE463_11280 PF01212 Beta-eliminating lyase CE463_11295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_11295 PF03466 LysR substrate binding domain CE463_11305 PF13592 Winged helix-turn helix CE463_11305 PF13358 DDE superfamily endonuclease CE463_11310 PF00990 Diguanylate cyclase, GGDEF domain CE463_11310 PF03707 Bacterial signalling protein N terminal repeat CE463_11310 PF13188 PAS domain CE463_11310 PF00563 EAL domain CE463_11315 PF00881 Nitroreductase family CE463_11330 PF07690 Major Facilitator Superfamily CE463_11335 PF03466 LysR substrate binding domain CE463_11335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_11340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_11340 PF03466 LysR substrate binding domain CE463_11345 PF00925 GTP cyclohydrolase II CE463_11350 PF02224 Cytidylate kinase CE463_11355 PF00575 S1 RNA binding domain CE463_11360 PF00216 Bacterial DNA-binding protein CE463_11370 PF18073 Rubredoxin metal binding domain CE463_11375 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CE463_11390 PF06508 Queuosine biosynthesis protein QueC CE463_11395 PF04055 Radical SAM superfamily CE463_11400 PF12843 Putative quorum-sensing-regulated virulence factor CE463_11405 PF01923 Cobalamin adenosyltransferase CE463_11410 PF00816 H-NS histone family CE463_11420 PF13358 DDE superfamily endonuclease CE463_11420 PF13592 Winged helix-turn helix CE463_11425 PF03553 Na+/H+ antiporter family CE463_11430 PF00265 Thymidine kinase CE463_11440 PF10722 Putative bacterial sensory transduction regulator CE463_11455 PF00842 Alanine racemase, C-terminal domain CE463_11455 PF01168 Alanine racemase, N-terminal domain CE463_11470 PF13808 DDE_Tnp_1-associated CE463_11470 PF01609 Transposase DDE domain CE463_11480 PF13247 4Fe-4S dicluster domain CE463_11485 PF03916 Polysulphide reductase, NrfD CE463_11490 PF00374 Nickel-dependent hydrogenase CE463_11495 PF01750 Hydrogenase maturation protease CE463_11500 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE CE463_11505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CE463_11510 PF00528 Binding-protein-dependent transport system inner membrane component CE463_11515 PF12911 N-terminal TM domain of oligopeptide transport permease C CE463_11515 PF00528 Binding-protein-dependent transport system inner membrane component CE463_11520 PF00005 ABC transporter CE463_11525 PF00005 ABC transporter CE463_11525 PF08402 TOBE domain CE463_11530 PF02492 CobW/HypB/UreG, nucleotide-binding domain CE463_11535 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CE463_11540 PF02769 AIR synthase related protein, C-terminal domain CE463_11540 PF00586 AIR synthase related protein, N-terminal domain CE463_11545 PF01924 Hydrogenase formation hypA family CE463_11550 PF01455 HupF/HypC family CE463_11555 PF17788 HypF Kae1-like domain CE463_11555 PF01300 Telomere recombination CE463_11555 PF07503 HypF finger CE463_11555 PF00708 Acylphosphatase CE463_11560 PF09107 Elongation factor SelB, winged helix CE463_11560 PF09105 Elongation factor SelB, winged helix CE463_11560 PF09106 Elongation factor SelB, winged helix CE463_11560 PF00009 Elongation factor Tu GTP binding domain CE463_11560 PF03144 Elongation factor Tu domain 2 CE463_11565 PF03841 L-seryl-tRNA selenium transferase CE463_11565 PF12390 Selenocysteine synthase N terminal CE463_11575 PF07450 Formate hydrogenlyase maturation protein HycH CE463_11580 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CE463_11585 PF12838 4Fe-4S dicluster domain CE463_11590 PF00374 Nickel-dependent hydrogenase CE463_11590 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CE463_11590 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CE463_11595 PF00146 NADH dehydrogenase CE463_11600 PF00361 Proton-conducting membrane transporter CE463_11605 PF12798 4Fe-4S binding domain CE463_11605 PF00037 4Fe-4S binding domain CE463_11625 PF07693 KAP family P-loop domain CE463_11645 PF00158 Sigma-54 interaction domain CE463_11645 PF02954 Bacterial regulatory protein, Fis family CE463_11645 PF01590 GAF domain CE463_11650 PF02634 FdhD/NarQ family CE463_11655 PF13662 Toprim domain CE463_11655 PF02132 RecR protein CE463_11660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_11660 PF00183 Hsp90 protein CE463_11670 PF05191 Adenylate kinase, active site lid CE463_11675 PF00762 Ferrochelatase CE463_11680 PF01124 MAPEG family CE463_11685 PF00294 pfkB family carbohydrate kinase CE463_11690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_11690 PF17200 Single Cache domain 2 CE463_11690 PF00672 HAMP domain CE463_11735 PF07273 Protein of unknown function (DUF1439) CE463_11740 PF00425 chorismate binding enzyme CE463_11745 PF13193 AMP-binding enzyme C-terminal domain CE463_11745 PF00501 AMP-binding enzyme CE463_11750 PF00550 Phosphopantetheine attachment site CE463_11750 PF00857 Isochorismatase family CE463_11755 PF00975 Thioesterase domain CE463_11755 PF00668 Condensation domain CE463_11755 PF13193 AMP-binding enzyme C-terminal domain CE463_11755 PF00501 AMP-binding enzyme CE463_11755 PF00550 Phosphopantetheine attachment site CE463_11765 PF00501 AMP-binding enzyme CE463_11765 PF00668 Condensation domain CE463_11765 PF00550 Phosphopantetheine attachment site CE463_11765 PF13193 AMP-binding enzyme C-terminal domain CE463_11765 PF07993 Male sterility protein CE463_11775 PF01497 Periplasmic binding protein CE463_11780 PF01648 4'-phosphopantetheinyl transferase superfamily CE463_11780 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CE463_11785 PF00005 ABC transporter CE463_11790 PF01032 FecCD transport family CE463_11795 PF01032 FecCD transport family CE463_11800 PF00593 TonB dependent receptor CE463_11800 PF07715 TonB-dependent Receptor Plug Domain CE463_11815 PF11143 Protein of unknown function (DUF2919) CE463_11820 PF01544 CorA-like Mg2+ transporter protein CE463_11830 PF01012 Electron transfer flavoprotein domain CE463_11835 PF00766 Electron transfer flavoprotein FAD-binding domain CE463_11835 PF01012 Electron transfer flavoprotein domain CE463_11840 PF00266 Aminotransferase class-V CE463_11845 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CE463_11850 PF00793 DAHP synthetase I family CE463_11855 PF00672 HAMP domain CE463_11855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_11860 PF04055 Radical SAM superfamily CE463_11865 PF02601 Exonuclease VII, large subunit CE463_11865 PF13742 OB-fold nucleic acid binding domain CE463_11885 PF01609 Transposase DDE domain CE463_11885 PF13808 DDE_Tnp_1-associated CE463_11890 PF02472 Biopolymer transport protein ExbD/TolR CE463_11895 PF01618 MotA/TolQ/ExbB proton channel family CE463_11910 PF00478 IMP dehydrogenase / GMP reductase domain CE463_11910 PF00571 CBS domain CE463_11915 PF00117 Glutamine amidotransferase class-I CE463_11915 PF00958 GMP synthase C terminal domain CE463_11915 PF02540 NAD synthase CE463_11950 PF13592 Winged helix-turn helix CE463_11950 PF13358 DDE superfamily endonuclease CE463_11965 PF05724 Thiopurine S-methyltransferase (TPMT) CE463_11975 PF00300 Histidine phosphatase superfamily (branch 1) CE463_11985 PF00892 EamA-like transporter family CE463_11990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CE463_11995 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CE463_12000 PF02559 CarD-like/TRCF domain CE463_12000 PF00270 DEAD/DEAH box helicase CE463_12000 PF00271 Helicase conserved C-terminal domain CE463_12000 PF03461 TRCF domain CE463_12000 PF17757 UvrB interaction domain CE463_12010 PF02687 FtsX-like permease family CE463_12010 PF12704 MacB-like periplasmic core domain CE463_12015 PF00005 ABC transporter CE463_12020 PF02687 FtsX-like permease family CE463_12020 PF12704 MacB-like periplasmic core domain CE463_12040 PF05698 Bacterial trigger factor protein (TF) C-terminus CE463_12040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CE463_12040 PF05697 Bacterial trigger factor protein (TF) CE463_12045 PF00574 Clp protease CE463_12050 PF10431 C-terminal, D2-small domain, of ClpB protein CE463_12050 PF07724 AAA domain (Cdc48 subfamily) CE463_12050 PF06689 ClpX C4-type zinc finger CE463_12055 PF00004 ATPase family associated with various cellular activities (AAA) CE463_12055 PF02190 ATP-dependent protease La (LON) substrate-binding domain CE463_12055 PF05362 Lon protease (S16) C-terminal proteolytic domain CE463_12060 PF00216 Bacterial DNA-binding protein CE463_12065 PF13145 PPIC-type PPIASE domain CE463_12070 PF12848 ABC transporter CE463_12070 PF00005 ABC transporter CE463_12075 PF00474 Sodium:solute symporter family CE463_12080 PF04341 Protein of unknown function, DUF485 CE463_12095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CE463_12095 PF00378 Enoyl-CoA hydratase/isomerase CE463_12095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CE463_12100 PF01235 Sodium:alanine symporter family CE463_12105 PF00583 Acetyltransferase (GNAT) family CE463_12115 PF01184 GPR1/FUN34/yaaH family CE463_12130 PF00376 MerR family regulatory protein CE463_12130 PF09278 MerR, DNA binding CE463_12135 PF00682 HMGL-like CE463_12140 PF00364 Biotin-requiring enzyme CE463_12140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CE463_12140 PF02785 Biotin carboxylase C-terminal domain CE463_12140 PF00289 Biotin carboxylase, N-terminal domain CE463_12145 PF00378 Enoyl-CoA hydratase/isomerase CE463_12150 PF01039 Carboxyl transferase domain CE463_12170 PF00171 Aldehyde dehydrogenase family CE463_12175 PF02770 Acyl-CoA dehydrogenase, middle domain CE463_12175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CE463_12175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CE463_12180 PF00378 Enoyl-CoA hydratase/isomerase CE463_12185 PF00378 Enoyl-CoA hydratase/isomerase CE463_12190 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CE463_12190 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CE463_12200 PF13520 Amino acid permease CE463_12205 PF01925 Sulfite exporter TauE/SafE CE463_12230 PF13358 DDE superfamily endonuclease CE463_12230 PF13592 Winged helix-turn helix CE463_12240 PF08279 HTH domain CE463_12240 PF13280 WYL domain CE463_12250 PF01502 Phosphoribosyl-AMP cyclohydrolase CE463_12250 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CE463_12255 PF00977 Histidine biosynthesis protein CE463_12260 PF00512 His Kinase A (phospho-acceptor) domain CE463_12260 PF01627 Hpt domain CE463_12260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_12260 PF00072 Response regulator receiver domain CE463_12270 PF00072 Response regulator receiver domain CE463_12275 PF00977 Histidine biosynthesis protein CE463_12280 PF00117 Glutamine amidotransferase class-I CE463_12285 PF00475 Imidazoleglycerol-phosphate dehydratase CE463_12285 PF08645 Polynucleotide kinase 3 phosphatase CE463_12290 PF00155 Aminotransferase class I and II CE463_12295 PF00815 Histidinol dehydrogenase CE463_12300 PF08029 HisG, C-terminal domain CE463_12300 PF01634 ATP phosphoribosyltransferase CE463_12310 PF13307 Helicase C-terminal domain CE463_12310 PF04851 Type III restriction enzyme, res subunit CE463_12315 PF00814 Glycoprotease family CE463_12325 PF12697 Alpha/beta hydrolase family CE463_12330 PF13193 AMP-binding enzyme C-terminal domain CE463_12330 PF00501 AMP-binding enzyme CE463_12335 PF00570 HRDC domain CE463_12335 PF01612 3'-5' exonuclease CE463_12350 PF01207 Dihydrouridine synthase (Dus) CE463_12355 PF04304 Protein of unknown function (DUF454) CE463_12360 PF00156 Phosphoribosyl transferase domain CE463_12365 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CE463_12365 PF12170 DNA polymerase III tau subunit V interacting with alpha CE463_12365 PF12169 DNA polymerase III subunits gamma and tau domain III CE463_12370 PF02575 YbaB/EbfC DNA-binding family CE463_12380 PF00072 Response regulator receiver domain CE463_12380 PF00196 Bacterial regulatory proteins, luxR family CE463_12390 PF11898 Domain of unknown function (DUF3418) CE463_12390 PF00270 DEAD/DEAH box helicase CE463_12390 PF00271 Helicase conserved C-terminal domain CE463_12390 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CE463_12390 PF04408 Helicase associated domain (HA2) CE463_12400 PF01386 Ribosomal L25p family CE463_12405 PF00753 Metallo-beta-lactamase superfamily CE463_12415 PF00586 AIR synthase related protein, N-terminal domain CE463_12415 PF02769 AIR synthase related protein, C-terminal domain CE463_12430 PF10672 S-adenosylmethionine-dependent methyltransferase CE463_12430 PF17785 PUA-like domain CE463_12435 PF00672 HAMP domain CE463_12435 PF12729 Four helix bundle sensory module for signal transduction CE463_12435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_12440 PF00708 Acylphosphatase CE463_12445 PF00043 Glutathione S-transferase, C-terminal domain CE463_12445 PF13417 Glutathione S-transferase, N-terminal domain CE463_12450 PF01588 Putative tRNA binding domain CE463_12450 PF08264 Anticodon-binding domain of tRNA CE463_12450 PF09334 tRNA synthetases class I (M) CE463_12455 PF10609 NUBPL iron-transfer P-loop NTPase CE463_12460 PF00485 Phosphoribulokinase / Uridine kinase family CE463_12465 PF00692 dUTPase CE463_12470 PF01384 Phosphate transporter family CE463_12475 PF00575 S1 RNA binding domain CE463_12475 PF12111 Polyribonucleotide phosphorylase C terminal CE463_12475 PF10150 Ribonuclease E/G family CE463_12480 PF01479 S4 domain CE463_12480 PF00849 RNA pseudouridylate synthase CE463_12485 PF13419 Haloacid dehalogenase-like hydrolase CE463_12490 PF02545 Maf-like protein CE463_12495 PF02620 Large ribosomal RNA subunit accumulation protein YceD CE463_12500 PF01783 Ribosomal L32p protein family CE463_12505 PF02504 Fatty acid synthesis protein CE463_12510 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CE463_12510 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CE463_12515 PF00698 Acyl transferase domain CE463_12525 PF00550 Phosphopantetheine attachment site CE463_12530 PF00109 Beta-ketoacyl synthase, N-terminal domain CE463_12530 PF02801 Beta-ketoacyl synthase, C-terminal domain CE463_12535 PF01063 Amino-transferase class IV CE463_12540 PF02618 YceG-like family CE463_12545 PF02223 Thymidylate kinase CE463_12550 PF09115 DNA polymerase III, delta subunit, C terminal CE463_12555 PF01026 TatD related DNase CE463_12560 PF00589 Phage integrase family CE463_12570 PF01189 16S rRNA methyltransferase RsmB/F CE463_12570 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CE463_12570 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CE463_12580 PF04403 Paraquat-inducible protein A CE463_12595 PF00285 Citrate synthase, C-terminal domain CE463_12600 PF03972 MmgE/PrpD family CE463_12615 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CE463_12615 PF06974 Protein of unknown function (DUF1298) CE463_12640 PF00106 short chain dehydrogenase CE463_12670 PF01381 Helix-turn-helix CE463_12735 PF01609 Transposase DDE domain CE463_12735 PF13808 DDE_Tnp_1-associated CE463_12745 PF13654 AAA domain CE463_12745 PF05362 Lon protease (S16) C-terminal proteolytic domain CE463_12750 PF07977 FabA-like domain CE463_12755 PF04957 Ribosome modulation factor CE463_12775 PF10672 S-adenosylmethionine-dependent methyltransferase CE463_12775 PF01170 Putative RNA methylase family UPF0020 CE463_12775 PF02926 THUMP domain CE463_12785 PF07126 Cell-division protein ZapC CE463_12790 PF01180 Dihydroorotate dehydrogenase CE463_12800 PF01609 Transposase DDE domain CE463_12800 PF13808 DDE_Tnp_1-associated CE463_12815 PF01433 Peptidase family M1 domain CE463_12815 PF11940 Domain of unknown function (DUF3458) Ig-like fold CE463_12815 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CE463_12820 PF00595 PDZ domain CE463_12820 PF17804 Tail specific protease N-terminal domain CE463_12820 PF03572 Peptidase family S41 CE463_12820 PF11818 C-terminal domain of tail specific protease (DUF3340) CE463_12825 PF04352 ProQ/FINO family CE463_12825 PF17516 ProQ C-terminal domain CE463_12830 PF13185 GAF domain CE463_12840 PF00115 Cytochrome C and Quinol oxidase polypeptide I CE463_12855 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CE463_12855 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CE463_12865 PF00403 Heavy-metal-associated domain CE463_12880 PF13545 Crp-like helix-turn-helix domain CE463_12880 PF00027 Cyclic nucleotide-binding domain CE463_12885 PF00582 Universal stress protein family CE463_12890 PF01171 PP-loop family CE463_12910 PF05025 RbsD / FucU transport protein family CE463_12920 PF02653 Branched-chain amino acid transport system / permease component CE463_12925 PF13407 Periplasmic binding protein domain CE463_12930 PF00294 pfkB family carbohydrate kinase CE463_12935 PF00356 Bacterial regulatory proteins, lacI family CE463_12955 PF02146 Sir2 family CE463_12970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_12970 PF09456 RcsC Alpha-Beta-Loop (ABL) CE463_12970 PF00512 His Kinase A (phospho-acceptor) domain CE463_12970 PF00072 Response regulator receiver domain CE463_12975 PF00216 Bacterial DNA-binding protein CE463_12980 PF03483 B3/4 domain CE463_12980 PF03484 tRNA synthetase B5 domain CE463_12980 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CE463_12980 PF01588 Putative tRNA binding domain CE463_12980 PF03147 Ferredoxin-fold anticodon binding domain CE463_12985 PF01409 tRNA synthetases class II core domain (F) CE463_12985 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CE463_12990 PF00453 Ribosomal protein L20 CE463_12995 PF01632 Ribosomal protein L35 CE463_13000 PF05198 Translation initiation factor IF-3, N-terminal domain CE463_13000 PF00707 Translation initiation factor IF-3, C-terminal domain CE463_13005 PF02824 TGS domain CE463_13005 PF03129 Anticodon binding domain CE463_13005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CE463_13005 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CE463_13015 PF04055 Radical SAM superfamily CE463_13020 PF03989 DNA gyrase C-terminal domain, beta-propeller CE463_13020 PF00521 DNA gyrase/topoisomerase IV, subunit A CE463_13030 PF13419 Haloacid dehalogenase-like hydrolase CE463_13035 PF02867 Ribonucleotide reductase, barrel domain CE463_13035 PF00317 Ribonucleotide reductase, all-alpha domain CE463_13035 PF03477 ATP cone domain CE463_13040 PF00268 Ribonucleotide reductase, small chain CE463_13045 PF00111 2Fe-2S iron-sulfur cluster binding domain CE463_13050 PF06725 3D domain CE463_13050 PF03562 MltA specific insert domain CE463_13055 PF06945 Protein of unknown function (DUF1289) CE463_13060 PF02378 Phosphotransferase system, EIIC CE463_13060 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CE463_13065 PF00294 pfkB family carbohydrate kinase CE463_13070 PF00381 PTS HPr component phosphorylation site CE463_13070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CE463_13075 PF00356 Bacterial regulatory proteins, lacI family CE463_13075 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CE463_13080 PF03222 Tryptophan/tyrosine permease family CE463_13095 PF00270 DEAD/DEAH box helicase CE463_13095 PF00271 Helicase conserved C-terminal domain CE463_13105 PF01264 Chorismate synthase CE463_13110 PF05175 Methyltransferase small domain CE463_13115 PF01713 Smr domain CE463_13120 PF00990 Diguanylate cyclase, GGDEF domain CE463_13120 PF08448 PAS fold CE463_13145 PF13358 DDE superfamily endonuclease CE463_13145 PF13592 Winged helix-turn helix CE463_13170 PF03831 PhnA domain CE463_13170 PF08274 PhnA Zinc-Ribbon CE463_13175 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CE463_13175 PF00378 Enoyl-CoA hydratase/isomerase CE463_13175 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CE463_13180 PF02803 Thiolase, C-terminal domain CE463_13180 PF00108 Thiolase, N-terminal domain CE463_13185 PF07726 ATPase family associated with various cellular activities (AAA) CE463_13185 PF17863 AAA lid domain CE463_13190 PF01882 Protein of unknown function DUF58 CE463_13200 PF07728 AAA domain (dynein-related subfamily) CE463_13200 PF13519 von Willebrand factor type A domain CE463_13200 PF17863 AAA lid domain CE463_13215 PF04542 Sigma-70 region 2 CE463_13215 PF04545 Sigma-70, region 4 CE463_13225 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CE463_13230 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CE463_13235 PF08668 HDOD domain CE463_13235 PF00563 EAL domain CE463_13240 PF00108 Thiolase, N-terminal domain CE463_13240 PF02803 Thiolase, C-terminal domain CE463_13245 PF00376 MerR family regulatory protein CE463_13245 PF09278 MerR, DNA binding CE463_13250 PF00375 Sodium:dicarboxylate symporter family CE463_13255 PF06865 Pyrimidine/purine nucleoside phosphorylase CE463_13260 PF03313 Serine dehydratase alpha chain CE463_13260 PF03315 Serine dehydratase beta chain CE463_13270 PF03315 Serine dehydratase beta chain CE463_13270 PF03313 Serine dehydratase alpha chain CE463_13275 PF13406 Transglycosylase SLT domain CE463_13280 PF05166 YcgL domain CE463_13285 PF03775 Septum formation inhibitor MinC, C-terminal domain CE463_13285 PF05209 Septum formation inhibitor MinC, N-terminal domain CE463_13290 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CE463_13295 PF03776 Septum formation topological specificity factor MinE CE463_13300 PF04269 Protein of unknown function, DUF440 CE463_13305 PF00912 Transglycosylase CE463_13310 PF04269 Protein of unknown function, DUF440 CE463_13320 PF17783 CvfB-like winged helix domain CE463_13320 PF13509 S1 domain CE463_13350 PF02525 Flavodoxin-like fold CE463_13355 PF00892 EamA-like transporter family CE463_13360 PF02222 ATP-grasp domain CE463_13365 PF13419 Haloacid dehalogenase-like hydrolase CE463_13375 PF00677 Lumazine binding domain CE463_13380 PF06786 Uncharacterised protein family (UPF0253) CE463_13385 PF01554 MatE CE463_13420 PF03104 DNA polymerase family B, exonuclease domain CE463_13420 PF00136 DNA polymerase family B CE463_13450 PF03279 Bacterial lipid A biosynthesis acyltransferase CE463_13460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_13460 PF03466 LysR substrate binding domain CE463_13465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CE463_13465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CE463_13470 PF01261 Xylose isomerase-like TIM barrel CE463_13475 PF03466 LysR substrate binding domain CE463_13475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_13485 PF00232 Glycosyl hydrolase family 1 CE463_13490 PF03466 LysR substrate binding domain CE463_13490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_13495 PF13358 DDE superfamily endonuclease CE463_13495 PF13592 Winged helix-turn helix CE463_13510 PF03606 C4-dicarboxylate anaerobic carrier CE463_13520 PF05433 Glycine zipper 2TM domain CE463_13540 PF01032 FecCD transport family CE463_13545 PF00005 ABC transporter CE463_13550 PF07690 Major Facilitator Superfamily CE463_13560 PF07152 YaeQ protein CE463_13605 PF01327 Polypeptide deformylase CE463_13630 PF05036 Sporulation related domain CE463_13630 PF03330 Lytic transglycolase CE463_13635 PF16330 MukB hinge domain CE463_13635 PF04310 MukB N-terminal CE463_13640 PF04288 MukE-like family CE463_13645 PF03882 MukF winged-helix domain CE463_13645 PF17193 MukF C-terminal domain CE463_13645 PF17192 MukF middle domain CE463_13660 PF02698 DUF218 domain CE463_13665 PF00121 Triosephosphate isomerase CE463_13670 PF00365 Phosphofructokinase CE463_13705 PF13419 Haloacid dehalogenase-like hydrolase CE463_13750 PF00128 Alpha amylase, catalytic domain CE463_13750 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CE463_13760 PF11398 Protein of unknown function (DUF2813) CE463_13765 PF14525 AraC-binding-like domain CE463_13765 PF12833 Helix-turn-helix domain CE463_13775 PF03466 LysR substrate binding domain CE463_13775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_13780 PF01925 Sulfite exporter TauE/SafE CE463_13795 PF01820 D-ala D-ala ligase N-terminus CE463_13795 PF07478 D-ala D-ala ligase C-terminus CE463_13805 PF00255 Glutathione peroxidase CE463_13810 PF00270 DEAD/DEAH box helicase CE463_13810 PF00271 Helicase conserved C-terminal domain CE463_13815 PF13673 Acetyltransferase (GNAT) domain CE463_13825 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CE463_13835 PF01928 CYTH domain CE463_13855 PF00465 Iron-containing alcohol dehydrogenase CE463_13860 PF03992 Antibiotic biosynthesis monooxygenase CE463_13865 PF08543 Phosphomethylpyrimidine kinase CE463_13885 PF00561 alpha/beta hydrolase fold CE463_13885 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CE463_13890 PF01575 MaoC like domain CE463_13905 PF00664 ABC transporter transmembrane region CE463_13905 PF00005 ABC transporter CE463_13915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_13915 PF00672 HAMP domain CE463_13915 PF00512 His Kinase A (phospho-acceptor) domain CE463_13915 PF01627 Hpt domain CE463_13915 PF00072 Response regulator receiver domain CE463_13915 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CE463_13920 PF00085 Thioredoxin CE463_13925 PF00939 Sodium:sulfate symporter transmembrane region CE463_13930 PF00343 Carbohydrate phosphorylase CE463_13975 PF01609 Transposase DDE domain CE463_13975 PF13808 DDE_Tnp_1-associated CE463_14000 PF04715 Anthranilate synthase component I, N terminal region CE463_14000 PF00425 chorismate binding enzyme CE463_14005 PF00293 NUDIX domain CE463_14010 PF03222 Tryptophan/tyrosine permease family CE463_14015 PF00375 Sodium:dicarboxylate symporter family CE463_14020 PF00270 DEAD/DEAH box helicase CE463_14020 PF00570 HRDC domain CE463_14020 PF16124 RecQ zinc-binding CE463_14020 PF09382 RQC domain CE463_14020 PF00271 Helicase conserved C-terminal domain CE463_14025 PF08298 PrkA AAA domain CE463_14025 PF06798 PrkA serine protein kinase C-terminal domain CE463_14030 PF04285 Protein of unknown function (DUF444) CE463_14035 PF04293 SpoVR like protein CE463_14040 PF07840 FadR C-terminal domain CE463_14040 PF00392 Bacterial regulatory proteins, gntR family CE463_14045 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CE463_14050 PF02600 Disulfide bond formation protein DsbB CE463_14055 PF09335 SNARE associated Golgi protein CE463_14065 PF00271 Helicase conserved C-terminal domain CE463_14065 PF12344 Ultra-violet resistance protein B CE463_14065 PF02151 UvrB/uvrC motif CE463_14065 PF04851 Type III restriction enzyme, res subunit CE463_14065 PF17757 UvrB interaction domain CE463_14080 PF02080 TrkA-C domain CE463_14080 PF06826 Predicted Permease Membrane Region CE463_14085 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE463_14085 PF01464 Transglycosylase SLT domain CE463_14090 PF01609 Transposase DDE domain CE463_14090 PF13808 DDE_Tnp_1-associated CE463_14120 PF12431 Transcriptional regulator CE463_14120 PF08279 HTH domain CE463_14120 PF00072 Response regulator receiver domain CE463_14125 PF17203 Single cache domain 3 CE463_14125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_14125 PF00989 PAS fold CE463_14125 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CE463_14130 PF01047 MarR family CE463_14130 PF00480 ROK family CE463_14135 PF00672 HAMP domain CE463_14135 PF17200 Single Cache domain 2 CE463_14135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_14140 PF02810 SEC-C motif CE463_14145 PF01266 FAD dependent oxidoreductase CE463_14145 PF04324 BFD-like [2Fe-2S] binding domain CE463_14150 PF00890 FAD binding domain CE463_14155 PF02754 Cysteine-rich domain CE463_14155 PF13183 4Fe-4S dicluster domain CE463_14160 PF02335 Cytochrome c552 CE463_14165 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) CE463_14165 PF13435 Cytochrome c554 and c-prime CE463_14170 PF00037 4Fe-4S binding domain CE463_14170 PF13247 4Fe-4S dicluster domain CE463_14175 PF03916 Polysulphide reductase, NrfD CE463_14180 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CE463_14180 PF01578 Cytochrome C assembly protein CE463_14185 PF08534 Redoxin CE463_14190 PF03918 Cytochrome C biogenesis protein CE463_14200 PF00768 D-alanyl-D-alanine carboxypeptidase CE463_14205 PF01212 Beta-eliminating lyase CE463_14215 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CE463_14230 PF07969 Amidohydrolase family CE463_14245 PF08267 Cobalamin-independent synthase, N-terminal domain CE463_14245 PF01717 Cobalamin-independent synthase, Catalytic domain CE463_14250 PF03466 LysR substrate binding domain CE463_14250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_14260 PF07715 TonB-dependent Receptor Plug Domain CE463_14260 PF00593 TonB dependent receptor CE463_14265 PF06445 GyrI-like small molecule binding domain CE463_14265 PF12833 Helix-turn-helix domain CE463_14270 PF00106 short chain dehydrogenase CE463_14275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_14275 PF03466 LysR substrate binding domain CE463_14280 PF13460 NAD(P)H-binding CE463_14290 PF01053 Cys/Met metabolism PLP-dependent enzyme CE463_14300 PF02774 Semialdehyde dehydrogenase, dimerisation domain CE463_14300 PF01118 Semialdehyde dehydrogenase, NAD binding domain CE463_14305 PF18381 YcaO cyclodehydratase C-terminal domain CE463_14305 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CE463_14310 PF01226 Formate/nitrite transporter CE463_14315 PF01228 Glycine radical CE463_14315 PF02901 Pyruvate formate lyase-like CE463_14320 PF03692 Putative zinc- or iron-chelating domain CE463_14325 PF02629 CoA binding domain CE463_14325 PF00549 CoA-ligase CE463_14330 PF08442 ATP-grasp domain CE463_14330 PF00549 CoA-ligase CE463_14335 PF02817 e3 binding domain CE463_14335 PF00364 Biotin-requiring enzyme CE463_14335 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CE463_14340 PF16078 2-oxoglutarate dehydrogenase N-terminus CE463_14340 PF00676 Dehydrogenase E1 component CE463_14340 PF16870 2-oxoglutarate dehydrogenase C-terminal CE463_14340 PF02779 Transketolase, pyrimidine binding domain CE463_14345 PF13085 2Fe-2S iron-sulfur cluster binding domain CE463_14350 PF00890 FAD binding domain CE463_14350 PF02910 Fumarate reductase flavoprotein C-term CE463_14355 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CE463_14360 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CE463_14365 PF00285 Citrate synthase, C-terminal domain CE463_14380 PF00109 Beta-ketoacyl synthase, N-terminal domain CE463_14380 PF02801 Beta-ketoacyl synthase, C-terminal domain CE463_14385 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CE463_14385 PF01266 FAD dependent oxidoreductase CE463_14395 PF03606 C4-dicarboxylate anaerobic carrier CE463_14410 PF01863 Protein of unknown function DUF45 CE463_14425 PF01197 Ribosomal protein L31 CE463_14430 PF00444 Ribosomal protein L36 CE463_14450 PF07745 Glycosyl hydrolase family 53 CE463_14455 PF00528 Binding-protein-dependent transport system inner membrane component CE463_14485 PF00005 ABC transporter CE463_14485 PF17912 MalK OB fold domain CE463_14500 PF00672 HAMP domain CE463_14500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_14510 PF07745 Glycosyl hydrolase family 53 CE463_14515 PF07745 Glycosyl hydrolase family 53 CE463_14520 PF02264 LamB porin CE463_14530 PF00356 Bacterial regulatory proteins, lacI family CE463_14535 PF16363 GDP-mannose 4,6 dehydratase CE463_14555 PF10509 Galactokinase galactose-binding signature CE463_14555 PF00288 GHMP kinases N terminal domain CE463_14555 PF08544 GHMP kinases C terminal CE463_14560 PF12833 Helix-turn-helix domain CE463_14560 PF02311 AraC-like ligand binding domain CE463_14565 PF02653 Branched-chain amino acid transport system / permease component CE463_14570 PF00005 ABC transporter CE463_14575 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CE463_14580 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CE463_14585 PF00596 Class II Aldolase and Adducin N-terminal domain CE463_14590 PF11762 L-arabinose isomerase C-terminal domain CE463_14590 PF02610 L-arabinose isomerase CE463_14595 PF03466 LysR substrate binding domain CE463_14595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_14600 PF00155 Aminotransferase class I and II CE463_14605 PF00795 Carbon-nitrogen hydrolase CE463_14610 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE463_14620 PF08411 Exonuclease C-terminal CE463_14620 PF00929 Exonuclease CE463_14640 PF03788 LrgA family CE463_14645 PF04172 LrgB-like family CE463_14650 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CE463_14650 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CE463_14655 PF00501 AMP-binding enzyme CE463_14660 PF08891 YfcL protein CE463_14670 PF03741 Integral membrane protein TerC family CE463_14675 PF00691 OmpA family CE463_14680 PF00990 Diguanylate cyclase, GGDEF domain CE463_14680 PF17152 Periplasmic sensor domain CE463_14685 PF13689 YfiR/HmsC-like CE463_14690 PF00158 Sigma-54 interaction domain CE463_14690 PF18024 Helix-turn-helix domain CE463_14695 PF01329 Pterin 4 alpha carbinolamine dehydratase CE463_14700 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CE463_14705 PF05128 Domain of unknown function (DUF697) CE463_14710 PF04317 YcjX-like family, DUF463 CE463_14720 PF06667 Phage shock protein B CE463_14725 PF04012 PspA/IM30 family CE463_14730 PF02954 Bacterial regulatory protein, Fis family CE463_14730 PF00158 Sigma-54 interaction domain CE463_14735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CE463_14740 PF00528 Binding-protein-dependent transport system inner membrane component CE463_14745 PF12911 N-terminal TM domain of oligopeptide transport permease C CE463_14745 PF00528 Binding-protein-dependent transport system inner membrane component CE463_14750 PF00005 ABC transporter CE463_14750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CE463_14755 PF00005 ABC transporter CE463_14760 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CE463_14765 PF00156 Phosphoribosyl transferase domain CE463_14770 PF02674 Colicin V production protein CE463_14775 PF02403 Seryl-tRNA synthetase N-terminal domain CE463_14775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CE463_14780 PF00004 ATPase family associated with various cellular activities (AAA) CE463_14780 PF16193 AAA C-terminal domain CE463_14780 PF12002 MgsA AAA+ ATPase C terminal CE463_14785 PF03548 Outer membrane lipoprotein carrier protein LolA CE463_14790 PF01580 FtsK/SpoIIIE family CE463_14790 PF09397 Ftsk gamma domain CE463_14790 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CE463_14790 PF17854 FtsK alpha domain CE463_14795 PF01037 Lrp/AsnC ligand binding domain CE463_14810 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE463_14820 PF05433 Glycine zipper 2TM domain CE463_14825 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CE463_14830 PF04377 Arginine-tRNA-protein transferase, C terminus CE463_14830 PF04376 Arginine-tRNA-protein transferase, N terminus CE463_14835 PF01176 Translation initiation factor 1A / IF-1 CE463_14840 PF10431 C-terminal, D2-small domain, of ClpB protein CE463_14840 PF02861 Clp amino terminal domain, pathogenicity island component CE463_14840 PF17871 AAA lid domain CE463_14840 PF07724 AAA domain (Cdc48 subfamily) CE463_14840 PF00004 ATPase family associated with various cellular activities (AAA) CE463_14845 PF02617 ATP-dependent Clp protease adaptor protein ClpS CE463_14850 PF00313 'Cold-shock' DNA-binding domain CE463_14855 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CE463_14855 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CE463_14915 PF06505 Activator of aromatic catabolism CE463_14915 PF00158 Sigma-54 interaction domain CE463_14915 PF02830 V4R domain CE463_14915 PF02954 Bacterial regulatory protein, Fis family CE463_14980 PF01740 STAS domain CE463_14980 PF00916 Sulfate permease family CE463_15030 PF00892 EamA-like transporter family CE463_15035 PF02508 Rnf-Nqr subunit, membrane protein CE463_15040 PF04060 Putative Fe-S cluster CE463_15045 PF12838 4Fe-4S dicluster domain CE463_15045 PF10531 SLBB domain CE463_15045 PF13375 RnfC Barrel sandwich hybrid domain CE463_15045 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CE463_15050 PF03116 NQR2, RnfD, RnfE family CE463_15055 PF04205 FMN-binding domain CE463_15060 PF02508 Rnf-Nqr subunit, membrane protein CE463_15065 PF10576 Iron-sulfur binding domain of endonuclease III CE463_15065 PF00730 HhH-GPD superfamily base excision DNA repair protein CE463_15065 PF00633 Helix-hairpin-helix motif CE463_15070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CE463_15075 PF00691 OmpA family CE463_15075 PF18393 MotY N-terminal domain CE463_15080 PF12729 Four helix bundle sensory module for signal transduction CE463_15080 PF00672 HAMP domain CE463_15080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_15085 PF00929 Exonuclease CE463_15090 PF13726 Na+-H+ antiporter family CE463_15090 PF03553 Na+/H+ antiporter family CE463_15095 PF03707 Bacterial signalling protein N terminal repeat CE463_15095 PF13188 PAS domain CE463_15095 PF00990 Diguanylate cyclase, GGDEF domain CE463_15095 PF00563 EAL domain CE463_15105 PF03880 DbpA RNA binding domain CE463_15105 PF00271 Helicase conserved C-terminal domain CE463_15105 PF00270 DEAD/DEAH box helicase CE463_15110 PF03061 Thioesterase superfamily CE463_15120 PF01565 FAD binding domain CE463_15120 PF13183 4Fe-4S dicluster domain CE463_15120 PF02913 FAD linked oxidases, C-terminal domain CE463_15130 PF03741 Integral membrane protein TerC family CE463_15130 PF03471 Transporter associated domain CE463_15135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CE463_15145 PF13344 Haloacid dehalogenase-like hydrolase CE463_15150 PF02254 TrkA-N domain CE463_15150 PF00999 Sodium/hydrogen exchanger family CE463_15160 PF00733 Asparagine synthase CE463_15160 PF13537 Glutamine amidotransferase domain CE463_15165 PF03577 Peptidase family C69 CE463_15185 PF00043 Glutathione S-transferase, C-terminal domain CE463_15185 PF13417 Glutathione S-transferase, N-terminal domain CE463_15190 PF02798 Glutathione S-transferase, N-terminal domain CE463_15190 PF14497 Glutathione S-transferase, C-terminal domain CE463_15205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CE463_15215 PF00849 RNA pseudouridylate synthase CE463_15235 PF08447 PAS fold CE463_15235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_15245 PF01027 Inhibitor of apoptosis-promoting Bax1 CE463_15250 PF12805 FUSC-like inner membrane protein yccS CE463_15255 PF04358 DsrC like protein CE463_15260 PF05036 Sporulation related domain CE463_15265 PF08245 Mur ligase middle domain CE463_15265 PF02875 Mur ligase family, glutamate ligase domain CE463_15270 PF01039 Carboxyl transferase domain CE463_15270 PF17848 Acetyl-coA carboxylase zinc finger domain CE463_15275 PF01416 tRNA pseudouridine synthase CE463_15285 PF02774 Semialdehyde dehydrogenase, dimerisation domain CE463_15285 PF01118 Semialdehyde dehydrogenase, NAD binding domain CE463_15290 PF11890 Domain of unknown function (DUF3410) CE463_15290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CE463_15290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CE463_15295 PF01569 PAP2 superfamily CE463_15300 PF03180 NLPA lipoprotein CE463_15325 PF01609 Transposase DDE domain CE463_15325 PF13808 DDE_Tnp_1-associated CE463_15340 PF00082 Subtilase family CE463_15340 PF01483 Proprotein convertase P-domain CE463_15350 PF01915 Glycosyl hydrolase family 3 C-terminal domain CE463_15350 PF00933 Glycosyl hydrolase family 3 N terminal domain CE463_15350 PF14310 Fibronectin type III-like domain CE463_15360 PF00391 PEP-utilising enzyme, mobile domain CE463_15360 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CE463_15360 PF02896 PEP-utilising enzyme, TIM barrel domain CE463_15365 PF03618 Kinase/pyrophosphorylase CE463_15385 PF00324 Amino acid permease CE463_15420 PF03239 Iron permease FTR1 family CE463_15425 PF01593 Flavin containing amine oxidoreductase CE463_15445 PF07690 Major Facilitator Superfamily CE463_15460 PF00005 ABC transporter CE463_15480 PF02308 MgtC family CE463_15530 PF01625 Peptide methionine sulfoxide reductase CE463_15535 PF00583 Acetyltransferase (GNAT) family CE463_15535 PF00696 Amino acid kinase family CE463_15540 PF01842 ACT domain CE463_15540 PF00696 Amino acid kinase family CE463_15550 PF00884 Sulfatase CE463_15555 PF17676 LD-carboxypeptidase C-terminal domain CE463_15555 PF02016 LD-carboxypeptidase N-terminal domain CE463_15565 PF01906 Putative heavy-metal-binding CE463_15570 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE463_15610 PF09278 MerR, DNA binding CE463_15610 PF00376 MerR family regulatory protein CE463_15625 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE463_15625 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CE463_15630 PF04898 Glutamate synthase central domain CE463_15630 PF01493 GXGXG motif CE463_15630 PF01645 Conserved region in glutamate synthase CE463_15630 PF00310 Glutamine amidotransferases class-II CE463_15635 PF13808 DDE_Tnp_1-associated CE463_15635 PF01609 Transposase DDE domain CE463_15675 PF00270 DEAD/DEAH box helicase CE463_15675 PF00271 Helicase conserved C-terminal domain CE463_15680 PF13302 Acetyltransferase (GNAT) domain CE463_15695 PF08378 Nuclease-related domain CE463_15705 PF07759 Protein of unknown function (DUF1615) CE463_15710 PF08502 LeuA allosteric (dimerisation) domain CE463_15710 PF00682 HMGL-like CE463_15715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CE463_15715 PF02142 MGS-like domain CE463_15715 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CE463_15720 PF00117 Glutamine amidotransferase class-I CE463_15720 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CE463_15725 PF05173 Dihydrodipicolinate reductase, C-terminus CE463_15725 PF01113 Dihydrodipicolinate reductase, N-terminus CE463_15740 PF01812 5-formyltetrahydrofolate cyclo-ligase family CE463_15745 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CE463_15750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CE463_15750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CE463_15750 PF01842 ACT domain CE463_15755 PF01219 Prokaryotic diacylglycerol kinase CE463_15760 PF00793 DAHP synthetase I family CE463_15765 PF00005 ABC transporter CE463_15770 PF01032 FecCD transport family CE463_15775 PF00512 His Kinase A (phospho-acceptor) domain CE463_15775 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE463_15775 PF01627 Hpt domain CE463_15775 PF00989 PAS fold CE463_15775 PF00072 Response regulator receiver domain CE463_15775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_15785 PF00437 Type II/IV secretion system protein CE463_15790 PF00483 Nucleotidyl transferase CE463_15805 PF02421 Ferrous iron transport protein B CE463_15805 PF07664 Ferrous iron transport protein B C terminus CE463_15805 PF07670 Nucleoside recognition CE463_15815 PF01253 Translation initiation factor SUI1 CE463_15820 PF01169 Uncharacterized protein family UPF0016 CE463_15850 PF00990 Diguanylate cyclase, GGDEF domain CE463_15850 PF13185 GAF domain CE463_15870 PF13592 Winged helix-turn helix CE463_15870 PF13358 DDE superfamily endonuclease CE463_15875 PF09190 DALR domain CE463_15875 PF01406 tRNA synthetases class I (C) catalytic domain CE463_15880 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CE463_15890 PF00149 Calcineurin-like phosphoesterase CE463_15895 PF04226 Transglycosylase associated protein CE463_15910 PF03466 LysR substrate binding domain CE463_15910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_15930 PF01066 CDP-alcohol phosphatidyltransferase CE463_15935 PF08459 UvrC Helix-hairpin-helix N-terminal CE463_15935 PF02151 UvrB/uvrC motif CE463_15935 PF01541 GIY-YIG catalytic domain CE463_15940 PF00196 Bacterial regulatory proteins, luxR family CE463_15940 PF00072 Response regulator receiver domain CE463_15945 PF02348 Cytidylyltransferase CE463_15950 PF03966 Trm112p-like protein CE463_15955 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CE463_15960 PF00005 ABC transporter CE463_15960 PF00664 ABC transporter transmembrane region CE463_15965 PF03772 Competence protein CE463_15965 PF00753 Metallo-beta-lactamase superfamily CE463_15980 PF05872 Bacterial protein of unknown function (DUF853) CE463_15985 PF00155 Aminotransferase class I and II CE463_15995 PF13609 Gram-negative porin CE463_16000 PF13307 Helicase C-terminal domain CE463_16000 PF06733 DEAD_2 CE463_16015 PF01926 50S ribosome-binding GTPase CE463_16020 PF00245 Alkaline phosphatase CE463_16025 PF00245 Alkaline phosphatase CE463_16040 PF14760 Rnk N-terminus CE463_16040 PF01272 Transcription elongation factor, GreA/GreB, C-term CE463_16045 PF00072 Response regulator receiver domain CE463_16045 PF00196 Bacterial regulatory proteins, luxR family CE463_16050 PF07730 Histidine kinase CE463_16050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_16050 PF05231 MASE1 CE463_16055 PF07690 Major Facilitator Superfamily CE463_16060 PF08448 PAS fold CE463_16060 PF00990 Diguanylate cyclase, GGDEF domain CE463_16065 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE463_16070 PF00528 Binding-protein-dependent transport system inner membrane component CE463_16075 PF00005 ABC transporter CE463_16080 PF04116 Fatty acid hydroxylase superfamily CE463_16085 PF13520 Amino acid permease CE463_16100 PF01595 Cyclin M transmembrane N-terminal domain CE463_16100 PF00571 CBS domain CE463_16100 PF03471 Transporter associated domain CE463_16105 PF01895 PhoU domain CE463_16115 PF00528 Binding-protein-dependent transport system inner membrane component CE463_16120 PF00528 Binding-protein-dependent transport system inner membrane component CE463_16125 PF14437 MafB19-like deaminase CE463_16135 PF01274 Malate synthase CE463_16140 PF00463 Isocitrate lyase family CE463_16145 PF00308 Bacterial dnaA protein CE463_16160 PF00586 AIR synthase related protein, N-terminal domain CE463_16160 PF02769 AIR synthase related protein, C-terminal domain CE463_16165 PF00551 Formyl transferase CE463_16170 PF01784 NIF3 (NGG1p interacting factor 3) CE463_16175 PF02954 Bacterial regulatory protein, Fis family CE463_16175 PF00158 Sigma-54 interaction domain CE463_16180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_16180 PF00989 PAS fold CE463_16180 PF00512 His Kinase A (phospho-acceptor) domain CE463_16200 PF17941 Polyphosphate kinase C-terminal domain 1 CE463_16200 PF13089 Polyphosphate kinase N-terminal domain CE463_16200 PF13090 Polyphosphate kinase C-terminal domain 2 CE463_16200 PF02503 Polyphosphate kinase middle domain CE463_16205 PF02541 Ppx/GppA phosphatase family CE463_16210 PF01769 Divalent cation transporter CE463_16210 PF00571 CBS domain CE463_16210 PF03448 MgtE intracellular N domain CE463_16230 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CE463_16230 PF10135 Rod binding protein CE463_16240 PF02107 Flagellar L-ring protein CE463_16245 PF00460 Flagella basal body rod protein CE463_16245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CE463_16250 PF00460 Flagella basal body rod protein CE463_16250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CE463_16255 PF07559 Flagellar basal body protein FlaE CE463_16255 PF00460 Flagella basal body rod protein CE463_16255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CE463_16265 PF00460 Flagella basal body rod protein CE463_16265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CE463_16270 PF00460 Flagella basal body rod protein CE463_16275 PF03705 CheR methyltransferase, all-alpha domain CE463_16275 PF01739 CheR methyltransferase, SAM binding domain CE463_16280 PF00072 Response regulator receiver domain CE463_16280 PF01584 CheW-like domain CE463_16300 PF12850 Calcineurin-like phosphoesterase superfamily domain CE463_16305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CE463_16315 PF00849 RNA pseudouridylate synthase CE463_16315 PF01479 S4 domain CE463_16320 PF01966 HD domain CE463_16320 PF11871 Domain of unknown function (DUF3391) CE463_16335 PF00892 EamA-like transporter family CE463_16375 PF00313 'Cold-shock' DNA-binding domain CE463_16400 PF02779 Transketolase, pyrimidine binding domain CE463_16400 PF02780 Transketolase, C-terminal domain CE463_16405 PF00676 Dehydrogenase E1 component CE463_16410 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CE463_16420 PF05472 DNA replication terminus site-binding protein (Ter protein) CE463_16425 PF04434 SWIM zinc finger CE463_16425 PF00176 SNF2 family N-terminal domain CE463_16425 PF00271 Helicase conserved C-terminal domain CE463_16430 PF04337 Protein of unknown function, DUF480 CE463_16445 PF13808 DDE_Tnp_1-associated CE463_16445 PF01609 Transposase DDE domain CE463_16460 PF02719 Polysaccharide biosynthesis protein CE463_16465 PF00953 Glycosyl transferase family 4 CE463_16470 PF01370 NAD dependent epimerase/dehydratase family CE463_16480 PF01609 Transposase DDE domain CE463_16480 PF13808 DDE_Tnp_1-associated CE463_16495 PF02080 TrkA-C domain CE463_16495 PF03600 Citrate transporter CE463_16500 PF01609 Transposase DDE domain CE463_16500 PF13808 DDE_Tnp_1-associated CE463_16520 PF02350 UDP-N-acetylglucosamine 2-epimerase CE463_16535 PF00005 ABC transporter CE463_16545 PF03958 Bacterial type II/III secretion system short domain CE463_16545 PF00263 Bacterial type II and III secretion system protein CE463_16575 PF08334 Type II secretion system (T2SS), protein G CE463_16575 PF07963 Prokaryotic N-terminal methylation motif CE463_16580 PF00482 Type II secretion system (T2SS), protein F CE463_16585 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CE463_16585 PF00437 Type II/IV secretion system protein CE463_16595 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CE463_16600 PF00483 Nucleotidyl transferase CE463_16605 PF04321 RmlD substrate binding domain CE463_16610 PF16363 GDP-mannose 4,6 dehydratase CE463_16615 PF02321 Outer membrane efflux protein CE463_16630 PF00440 Bacterial regulatory proteins, tetR family CE463_16630 PF08361 MAATS-type transcriptional repressor, C-terminal region CE463_16650 PF00849 RNA pseudouridylate synthase CE463_16650 PF01479 S4 domain CE463_16655 PF04079 Segregation and condensation complex subunit ScpB CE463_16660 PF02616 Segregation and condensation protein ScpA CE463_16665 PF01300 Telomere recombination CE463_16670 PF02811 PHP domain CE463_16675 PF00425 chorismate binding enzyme CE463_16675 PF04715 Anthranilate synthase component I, N terminal region CE463_16680 PF02885 Glycosyl transferase family, helical bundle domain CE463_16680 PF00117 Glutamine amidotransferase class-I CE463_16680 PF00591 Glycosyl transferase family, a/b domain CE463_16685 PF00591 Glycosyl transferase family, a/b domain CE463_16685 PF02885 Glycosyl transferase family, helical bundle domain CE463_16690 PF00218 Indole-3-glycerol phosphate synthase CE463_16690 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CE463_16695 PF00291 Pyridoxal-phosphate dependent enzyme CE463_16700 PF00290 Tryptophan synthase alpha chain CE463_16755 PF02378 Phosphotransferase system, EIIC CE463_16755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CE463_16755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CE463_16765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CE463_16775 PF00849 RNA pseudouridylate synthase CE463_16780 PF00293 NUDIX domain CE463_16790 PF04356 Protein of unknown function (DUF489) CE463_16795 PF00206 Lyase CE463_16795 PF08328 Adenylosuccinate lyase C-terminal CE463_16800 PF08007 Cupin superfamily protein CE463_16850 PF13417 Glutathione S-transferase, N-terminal domain CE463_16855 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CE463_16855 PF01243 Pyridoxamine 5'-phosphate oxidase CE463_16870 PF01029 NusB family CE463_16870 PF01189 16S rRNA methyltransferase RsmB/F CE463_16875 PF00462 Glutaredoxin CE463_16880 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CE463_16880 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CE463_16885 PF04333 MlaA lipoprotein CE463_16895 PF03918 Cytochrome C biogenesis protein CE463_16900 PF08534 Redoxin CE463_16905 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CE463_16905 PF01578 Cytochrome C assembly protein CE463_16910 PF03100 CcmE CE463_16915 PF04995 Heme exporter protein D (CcmD) CE463_16920 PF01578 Cytochrome C assembly protein CE463_16925 PF03379 CcmB protein CE463_16930 PF00005 ABC transporter CE463_16940 PF01584 CheW-like domain CE463_16950 PF13614 AAA domain CE463_16955 PF00691 OmpA family CE463_16955 PF13677 Membrane MotB of proton-channel complex MotA/MotB CE463_16960 PF01618 MotA/TolQ/ExbB proton channel family CE463_16965 PF00072 Response regulator receiver domain CE463_16965 PF01339 CheB methylesterase CE463_16970 PF07194 P2 response regulator binding domain CE463_16970 PF01584 CheW-like domain CE463_16970 PF01627 Hpt domain CE463_16970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_16970 PF02895 Signal transducing histidine kinase, homodimeric domain CE463_16975 PF13358 DDE superfamily endonuclease CE463_16975 PF13592 Winged helix-turn helix CE463_16980 PF03466 LysR substrate binding domain CE463_16980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_16985 PF12563 Hemolytic toxin N terminal CE463_16985 PF07968 Leukocidin/Hemolysin toxin family CE463_16990 PF00877 NlpC/P60 family CE463_17000 PF00171 Aldehyde dehydrogenase family CE463_17005 PF00440 Bacterial regulatory proteins, tetR family CE463_17005 PF17932 Tetracyclin repressor-like, C-terminal domain CE463_17015 PF00465 Iron-containing alcohol dehydrogenase CE463_17025 PF00291 Pyridoxal-phosphate dependent enzyme CE463_17040 PF00916 Sulfate permease family CE463_17040 PF01740 STAS domain CE463_17045 PF01554 MatE CE463_17055 PF04325 Protein of unknown function (DUF465) CE463_17060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CE463_17060 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CE463_17060 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CE463_17060 PF10371 Domain of unknown function CE463_17060 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CE463_17065 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CE463_17065 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CE463_17065 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE463_17075 PF03473 MOSC domain CE463_17075 PF03476 MOSC N-terminal beta barrel domain CE463_17075 PF03476 MOSC N-terminal beta barrel domain CE463_17075 PF00111 2Fe-2S iron-sulfur cluster binding domain CE463_17075 PF03473 MOSC domain CE463_17075 PF00111 2Fe-2S iron-sulfur cluster binding domain CE463_17080 PF08447 PAS fold CE463_17080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_17080 PF13426 PAS domain CE463_17085 PF01435 Peptidase family M48 CE463_17095 PF12697 Alpha/beta hydrolase family CE463_17095 PF08241 Methyltransferase domain CE463_17100 PF00155 Aminotransferase class I and II CE463_17105 PF06968 Biotin and Thiamin Synthesis associated domain CE463_17105 PF04055 Radical SAM superfamily CE463_17110 PF00202 Aminotransferase class-III CE463_17125 PF01336 OB-fold nucleic acid binding domain CE463_17125 PF00152 tRNA synthetases class II (D, K and N) CE463_17145 PF03466 LysR substrate binding domain CE463_17145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_17150 PF03960 ArsC family CE463_17155 PF01546 Peptidase family M20/M25/M40 CE463_17155 PF07687 Peptidase dimerisation domain CE463_17160 PF02557 D-alanyl-D-alanine carboxypeptidase CE463_17170 PF02080 TrkA-C domain CE463_17170 PF03471 Transporter associated domain CE463_17170 PF00999 Sodium/hydrogen exchanger family CE463_17180 PF00999 Sodium/hydrogen exchanger family CE463_17180 PF02080 TrkA-C domain CE463_17180 PF03471 Transporter associated domain CE463_17190 PF13808 DDE_Tnp_1-associated CE463_17190 PF01609 Transposase DDE domain CE463_17195 PF00258 Flavodoxin CE463_17200 PF00849 RNA pseudouridylate synthase CE463_17205 PF04287 tRNA pseudouridine synthase C CE463_17230 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) CE463_17235 PF07348 Syd protein (SUKH-2) CE463_17240 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CE463_17240 PF14489 QueF-like protein CE463_17250 PF07694 5TMR of 5TMR-LYT CE463_17250 PF00990 Diguanylate cyclase, GGDEF domain CE463_17255 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CE463_17255 PF03641 Possible lysine decarboxylase CE463_17255 PF11892 Domain of unknown function (DUF3412) CE463_17260 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CE463_17260 PF01367 5'-3' exonuclease, C-terminal SAM fold CE463_17265 PF00180 Isocitrate/isopropylmalate dehydrogenase CE463_17265 PF18324 Hypothetical protein TT1725 CE463_17275 PF01728 FtsJ-like methyltransferase CE463_17275 PF18125 RlmM ferredoxin-like domain CE463_17280 PF04241 Protein of unknown function (DUF423) CE463_17290 PF03466 LysR substrate binding domain CE463_17290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_17295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_17295 PF00672 HAMP domain CE463_17300 PF00817 impB/mucB/samB family CE463_17300 PF11798 IMS family HHH motif CE463_17300 PF11799 impB/mucB/samB family C-terminal domain CE463_17315 PF02424 ApbE family CE463_17320 PF00175 Oxidoreductase NAD-binding domain CE463_17320 PF00111 2Fe-2S iron-sulfur cluster binding domain CE463_17320 PF00970 Oxidoreductase FAD-binding domain CE463_17325 PF02508 Rnf-Nqr subunit, membrane protein CE463_17330 PF02508 Rnf-Nqr subunit, membrane protein CE463_17335 PF04205 FMN-binding domain CE463_17340 PF03116 NQR2, RnfD, RnfE family CE463_17345 PF11973 NQRA C-terminal domain CE463_17345 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CE463_17350 PF01722 BolA-like protein CE463_17360 PF05175 Methyltransferase small domain CE463_17370 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CE463_17380 PF07690 Major Facilitator Superfamily CE463_17385 PF03502 Nucleoside-specific channel-forming protein, Tsx CE463_17390 PF04461 Protein of unknown function (DUF520) CE463_17395 PF02558 Ketopantoate reductase PanE/ApbA CE463_17395 PF08546 Ketopantoate reductase PanE/ApbA C terminal CE463_17400 PF01965 DJ-1/PfpI family CE463_17405 PF00205 Thiamine pyrophosphate enzyme, central domain CE463_17405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CE463_17405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CE463_17410 PF03306 Alpha-acetolactate decarboxylase CE463_17415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_17415 PF03466 LysR substrate binding domain CE463_17420 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CE463_17420 PF06165 Glycosyltransferase family 36 CE463_17420 PF10091 Putative glucoamylase CE463_17435 PF06965 Na+/H+ antiporter 1 CE463_17435 PF13462 Thioredoxin CE463_17440 PF16363 GDP-mannose 4,6 dehydratase CE463_17445 PF00970 Oxidoreductase FAD-binding domain CE463_17445 PF00175 Oxidoreductase NAD-binding domain CE463_17445 PF00111 2Fe-2S iron-sulfur cluster binding domain CE463_17450 PF03063 Prismane/CO dehydrogenase family CE463_17455 PF00210 Ferritin-like domain CE463_17495 PF00106 short chain dehydrogenase CE463_17505 PF03441 FAD binding domain of DNA photolyase CE463_17505 PF00875 DNA photolyase CE463_17510 PF13411 MerR HTH family regulatory protein CE463_17515 PF08349 Protein of unknown function (DUF1722) CE463_17545 PF01817 Chorismate mutase type II CE463_17545 PF00800 Prephenate dehydratase CE463_17570 PF07995 Glucose / Sorbosone dehydrogenase CE463_17585 PF03573 outer membrane porin, OprD family CE463_17595 PF00106 short chain dehydrogenase CE463_17620 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CE463_17630 PF00730 HhH-GPD superfamily base excision DNA repair protein CE463_17630 PF06029 AlkA N-terminal domain CE463_17630 PF02805 Metal binding domain of Ada CE463_17630 PF12833 Helix-turn-helix domain CE463_17635 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CE463_17635 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CE463_17640 PF01209 ubiE/COQ5 methyltransferase family CE463_17645 PF06906 Protein of unknown function (DUF1272) CE463_17660 PF01810 LysE type translocator CE463_17665 PF03466 LysR substrate binding domain CE463_17665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_17670 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CE463_17670 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CE463_17695 PF12729 Four helix bundle sensory module for signal transduction CE463_17695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_17695 PF00672 HAMP domain CE463_17700 PF01584 CheW-like domain CE463_17705 PF02203 Tar ligand binding domain homologue CE463_17705 PF00672 HAMP domain CE463_17705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_17710 PF03705 CheR methyltransferase, all-alpha domain CE463_17710 PF01739 CheR methyltransferase, SAM binding domain CE463_17735 PF13808 DDE_Tnp_1-associated CE463_17735 PF01609 Transposase DDE domain CE463_17740 PF07883 Cupin domain CE463_17740 PF12833 Helix-turn-helix domain CE463_17750 PF01266 FAD dependent oxidoreductase CE463_17755 PF01381 Helix-turn-helix CE463_17755 PF07883 Cupin domain CE463_17760 PF00171 Aldehyde dehydrogenase family CE463_17765 PF00202 Aminotransferase class-III CE463_17770 PF00324 Amino acid permease CE463_17775 PF00324 Amino acid permease CE463_17780 PF02690 Na+/Pi-cotransporter CE463_17785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CE463_17785 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CE463_17790 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CE463_17805 PF01048 Phosphorylase superfamily CE463_17830 PF14821 Threonine synthase N terminus CE463_17830 PF00291 Pyridoxal-phosphate dependent enzyme CE463_17835 PF00288 GHMP kinases N terminal domain CE463_17835 PF08544 GHMP kinases C terminal CE463_17840 PF00696 Amino acid kinase family CE463_17840 PF03447 Homoserine dehydrogenase, NAD binding domain CE463_17840 PF13840 ACT domain CE463_17840 PF00742 Homoserine dehydrogenase CE463_17840 PF01842 ACT domain CE463_17845 PF00588 SpoU rRNA Methylase family CE463_17850 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CE463_17865 PF03737 Aldolase/RraA CE463_17875 PF00072 Response regulator receiver domain CE463_17875 PF00486 Transcriptional regulatory protein, C terminal CE463_17890 PF00005 ABC transporter CE463_17890 PF00664 ABC transporter transmembrane region CE463_17895 PF00005 ABC transporter CE463_17895 PF00664 ABC transporter transmembrane region CE463_17915 PF01980 tRNA-methyltransferase O CE463_17915 PF18389 TrmO C-terminal domain CE463_17920 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CE463_17920 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CE463_17935 PF00291 Pyridoxal-phosphate dependent enzyme CE463_17940 PF00381 PTS HPr component phosphorylation site CE463_17945 PF00391 PEP-utilising enzyme, mobile domain CE463_17945 PF02896 PEP-utilising enzyme, TIM barrel domain CE463_17945 PF05524 PEP-utilising enzyme, N-terminal CE463_17950 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CE463_17955 PF08448 PAS fold CE463_17955 PF00990 Diguanylate cyclase, GGDEF domain CE463_17965 PF01292 Prokaryotic cytochrome b561 CE463_17975 PF13808 DDE_Tnp_1-associated CE463_17975 PF01609 Transposase DDE domain CE463_17985 PF13476 AAA domain CE463_17990 PF00149 Calcineurin-like phosphoesterase CE463_17990 PF12320 Type 5 capsule protein repressor C-terminal domain CE463_18000 PF04381 Putative exonuclease, RdgC CE463_18010 PF02254 TrkA-N domain CE463_18010 PF00999 Sodium/hydrogen exchanger family CE463_18015 PF02254 TrkA-N domain CE463_18015 PF00999 Sodium/hydrogen exchanger family CE463_18020 PF04151 Bacterial pre-peptidase C-terminal domain CE463_18020 PF04389 Peptidase family M28 CE463_18030 PF00224 Pyruvate kinase, barrel domain CE463_18030 PF02887 Pyruvate kinase, alpha/beta domain CE463_18035 PF00924 Mechanosensitive ion channel CE463_18035 PF12795 Mechanosensitive ion channel porin domain CE463_18035 PF12794 Mechanosensitive ion channel inner membrane domain 1 CE463_18040 PF13356 Arm DNA-binding domain CE463_18040 PF00589 Phage integrase family CE463_18055 PF01047 MarR family CE463_18060 PF00529 HlyD membrane-fusion protein of T1SS CE463_18060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CE463_18080 PF01679 Proteolipid membrane potential modulator CE463_18095 PF13597 Anaerobic ribonucleoside-triphosphate reductase CE463_18095 PF03477 ATP cone domain CE463_18105 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CE463_18105 PF12826 Helix-hairpin-helix motif CE463_18105 PF03120 NAD-dependent DNA ligase OB-fold domain CE463_18105 PF01653 NAD-dependent DNA ligase adenylation domain CE463_18105 PF00533 BRCA1 C Terminus (BRCT) domain CE463_18110 PF04354 ZipA, C-terminal FtsZ-binding domain CE463_18115 PF06470 SMC proteins Flexible Hinge Domain CE463_18115 PF02463 RecF/RecN/SMC N terminal domain CE463_18125 PF03458 UPF0126 domain CE463_18135 PF05951 Bacterial protein of unknown function (DUF882) CE463_18140 PF01471 Putative peptidoglycan binding domain CE463_18140 PF03734 L,D-transpeptidase catalytic domain CE463_18155 PF00535 Glycosyl transferase family 2 CE463_18175 PF00579 tRNA synthetases class I (W and Y) CE463_18180 PF08525 Opacity-associated protein A N-terminal motif CE463_18180 PF01476 LysM domain CE463_18180 PF01551 Peptidase family M23 CE463_18185 PF03702 Anhydro-N-acetylmuramic acid kinase CE463_18190 PF01042 Endoribonuclease L-PSP CE463_18205 PF13808 DDE_Tnp_1-associated CE463_18205 PF01609 Transposase DDE domain CE463_18210 PF02779 Transketolase, pyrimidine binding domain CE463_18210 PF02780 Transketolase, C-terminal domain CE463_18210 PF00456 Transketolase, thiamine diphosphate binding domain CE463_18215 PF02773 S-adenosylmethionine synthetase, C-terminal domain CE463_18215 PF02772 S-adenosylmethionine synthetase, central domain CE463_18215 PF00438 S-adenosylmethionine synthetase, N-terminal domain CE463_18220 PF10263 SprT-like family CE463_18220 PF17283 SprT-like zinc ribbon domain CE463_18225 PF04231 Endonuclease I CE463_18230 PF04452 RNA methyltransferase CE463_18235 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CE463_18235 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CE463_18250 PF13358 DDE superfamily endonuclease CE463_18250 PF13592 Winged helix-turn helix CE463_18255 PF02622 Uncharacterized ACR, COG1678 CE463_18260 PF03652 Holliday junction resolvase CE463_18265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_18265 PF03466 LysR substrate binding domain CE463_18270 PF07690 Major Facilitator Superfamily CE463_18275 PF00144 Beta-lactamase CE463_18280 PF17863 AAA lid domain CE463_18280 PF07726 ATPase family associated with various cellular activities (AAA) CE463_18290 PF11992 Domain of unknown function (DUF3488) CE463_18290 PF01841 Transglutaminase-like superfamily CE463_18290 PF13559 Domain of unknown function (DUF4129) CE463_18295 PF01235 Sodium:alanine symporter family CE463_18300 PF00923 Transaldolase/Fructose-6-phosphate aldolase CE463_18315 PF03167 Uracil DNA glycosylase superfamily CE463_18325 PF13358 DDE superfamily endonuclease CE463_18325 PF13592 Winged helix-turn helix CE463_18330 PF01228 Glycine radical CE463_18350 PF00793 DAHP synthetase I family CE463_18355 PF13369 Transglutaminase-like superfamily CE463_18365 PF13847 Methyltransferase domain CE463_18365 PF17827 PrmC N-terminal domain CE463_18370 PF03462 PCRF domain CE463_18370 PF00472 RF-1 domain CE463_18375 PF01488 Shikimate / quinate 5-dehydrogenase CE463_18375 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CE463_18375 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CE463_18380 PF03550 Outer membrane lipoprotein LolB CE463_18385 PF00288 GHMP kinases N terminal domain CE463_18385 PF08544 GHMP kinases C terminal CE463_18395 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CE463_18395 PF14572 Phosphoribosyl synthetase-associated domain CE463_18400 PF00149 Calcineurin-like phosphoesterase CE463_18400 PF02872 5'-nucleotidase, C-terminal domain CE463_18405 PF01195 Peptidyl-tRNA hydrolase CE463_18410 PF01926 50S ribosome-binding GTPase CE463_18410 PF06071 Protein of unknown function (DUF933) CE463_18455 PF03600 Citrate transporter CE463_18455 PF02080 TrkA-C domain CE463_18460 PF04973 Nicotinamide mononucleotide transporter CE463_18465 PF01048 Phosphorylase superfamily CE463_18480 PF07859 alpha/beta hydrolase fold CE463_18500 PF00012 Hsp70 protein CE463_18515 PF00128 Alpha amylase, catalytic domain CE463_18515 PF16657 Maltogenic Amylase, C-terminal domain CE463_18530 PF12848 ABC transporter CE463_18530 PF00005 ABC transporter CE463_18535 PF07690 Major Facilitator Superfamily CE463_18550 PF13419 Haloacid dehalogenase-like hydrolase CE463_18560 PF00171 Aldehyde dehydrogenase family CE463_18565 PF04958 Arginine N-succinyltransferase beta subunit CE463_18570 PF00202 Aminotransferase class-III CE463_18575 PF00117 Glutamine amidotransferase class-I CE463_18585 PF00579 tRNA synthetases class I (W and Y) CE463_18590 PF13419 Haloacid dehalogenase-like hydrolase CE463_18595 PF00834 Ribulose-phosphate 3 epimerase family CE463_18600 PF02086 D12 class N6 adenine-specific DNA methyltransferase CE463_18610 PF01761 3-dehydroquinate synthase CE463_18615 PF01202 Shikimate kinase CE463_18645 PF17092 Penicillin-binding protein OB-like domain CE463_18645 PF00905 Penicillin binding protein transpeptidase domain CE463_18645 PF00912 Transglycosylase CE463_18650 PF03466 LysR substrate binding domain CE463_18650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_18655 PF17200 Single Cache domain 2 CE463_18655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_18655 PF00672 HAMP domain CE463_18670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_18670 PF03466 LysR substrate binding domain CE463_18685 PF01476 LysM domain CE463_18685 PF08525 Opacity-associated protein A N-terminal motif CE463_18685 PF01551 Peptidase family M23 CE463_18715 PF03009 Glycerophosphoryl diester phosphodiesterase family CE463_18720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_18720 PF02743 Cache domain CE463_18720 PF00672 HAMP domain CE463_18725 PF02910 Fumarate reductase flavoprotein C-term CE463_18725 PF00890 FAD binding domain CE463_18730 PF13183 4Fe-4S dicluster domain CE463_18730 PF13085 2Fe-2S iron-sulfur cluster binding domain CE463_18735 PF02300 Fumarate reductase subunit C CE463_18740 PF02313 Fumarate reductase subunit D CE463_18760 PF06224 Winged helix DNA-binding domain CE463_18775 PF00501 AMP-binding enzyme CE463_18795 PF00486 Transcriptional regulatory protein, C terminal CE463_18795 PF00072 Response regulator receiver domain CE463_18800 PF00512 His Kinase A (phospho-acceptor) domain CE463_18800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_18800 PF08521 Two-component sensor kinase N-terminal CE463_18810 PF00478 IMP dehydrogenase / GMP reductase domain CE463_18820 PF09285 Elongation factor P, C-terminal CE463_18820 PF08207 Elongation factor P (EF-P) KOW-like domain CE463_18820 PF01132 Elongation factor P (EF-P) OB domain CE463_18830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CE463_18830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CE463_18850 PF13419 Haloacid dehalogenase-like hydrolase CE463_18860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_18860 PF03466 LysR substrate binding domain CE463_18865 PF05230 MASE2 domain CE463_18865 PF00990 Diguanylate cyclase, GGDEF domain CE463_18870 PF00313 'Cold-shock' DNA-binding domain CE463_18875 PF01494 FAD binding domain CE463_18880 PF01938 TRAM domain CE463_18880 PF00919 Uncharacterized protein family UPF0004 CE463_18880 PF04055 Radical SAM superfamily CE463_18885 PF02562 PhoH-like protein CE463_18890 PF02130 Uncharacterized protein family UPF0054 CE463_18895 PF03471 Transporter associated domain CE463_18895 PF00571 CBS domain CE463_18900 PF00795 Carbon-nitrogen hydrolase CE463_18905 PF07295 Zinc-ribbon containing domain CE463_18910 PF13603 Leucyl-tRNA synthetase, Domain 2 CE463_18910 PF00133 tRNA synthetases class I (I, L, M and V) CE463_18910 PF08264 Anticodon-binding domain of tRNA CE463_18930 PF01467 Cytidylyltransferase-like CE463_18940 PF02590 Predicted SPOUT methyltransferase CE463_18945 PF00905 Penicillin binding protein transpeptidase domain CE463_18945 PF03717 Penicillin-binding Protein dimerisation domain CE463_18950 PF01098 Cell cycle protein CE463_18955 PF13406 Transglycosylase SLT domain CE463_18960 PF05036 Sporulation related domain CE463_18960 PF03330 Lytic transglycolase CE463_18965 PF07943 Penicillin-binding protein 5, C-terminal domain CE463_18965 PF00768 D-alanyl-D-alanine carboxypeptidase CE463_18970 PF04359 Protein of unknown function (DUF493) CE463_18975 PF03099 Biotin/lipoate A/B protein ligase family CE463_18985 PF04055 Radical SAM superfamily CE463_18985 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CE463_19000 PF13302 Acetyltransferase (GNAT) domain CE463_19005 PF06821 Serine hydrolase CE463_19010 PF02508 Rnf-Nqr subunit, membrane protein CE463_19020 PF02272 DHHA1 domain CE463_19020 PF17768 RecJ OB domain CE463_19020 PF01368 DHH family CE463_19030 PF01741 Large-conductance mechanosensitive channel, MscL CE463_19035 PF17158 Membrane-associated sensor, integral membrane domain CE463_19035 PF00990 Diguanylate cyclase, GGDEF domain CE463_19040 PF00589 Phage integrase family CE463_19040 PF02899 Phage integrase, N-terminal SAM-like domain CE463_19045 PF00258 Flavodoxin CE463_19055 PF01523 Putative modulator of DNA gyrase CE463_19065 PF03734 L,D-transpeptidase catalytic domain CE463_19065 PF17969 L,D-transpeptidase C-terminal domain CE463_19075 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CE463_19100 PF13808 DDE_Tnp_1-associated CE463_19100 PF01609 Transposase DDE domain CE463_19105 PF03575 Peptidase family S51 CE463_19115 PF06476 Protein of unknown function (DUF1090) CE463_19120 PF02635 DsrE/DsrF-like family CE463_19125 PF00990 Diguanylate cyclase, GGDEF domain CE463_19130 PF07690 Major Facilitator Superfamily CE463_19135 PF00575 S1 RNA binding domain CE463_19135 PF01138 3' exoribonuclease family, domain 1 CE463_19135 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CE463_19135 PF00013 KH domain CE463_19135 PF03725 3' exoribonuclease family, domain 2 CE463_19140 PF00312 Ribosomal protein S15 CE463_19145 PF01509 TruB family pseudouridylate synthase (N terminal domain) CE463_19145 PF16198 tRNA pseudouridylate synthase B C-terminal domain CE463_19145 PF09157 Pseudouridine synthase II TruB, C-terminal CE463_19150 PF02033 Ribosome-binding factor A CE463_19155 PF00009 Elongation factor Tu GTP binding domain CE463_19155 PF08364 Bacterial translation initiation factor IF-2 associated region CE463_19155 PF04760 Translation initiation factor IF-2, N-terminal region CE463_19155 PF11987 Translation-initiation factor 2 CE463_19160 PF00575 S1 RNA binding domain CE463_19160 PF08529 NusA N-terminal domain CE463_19160 PF13184 NusA-like KH domain CE463_19165 PF17384 RimP C-terminal SH3 domain CE463_19165 PF02576 RimP N-terminal domain CE463_19180 PF03840 Preprotein translocase SecG subunit CE463_19185 PF00121 Triosephosphate isomerase CE463_19190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CE463_19190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CE463_19190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CE463_19190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CE463_19195 PF00809 Pterin binding enzyme CE463_19200 PF01434 Peptidase family M41 CE463_19200 PF00004 ATPase family associated with various cellular activities (AAA) CE463_19200 PF06480 FtsH Extracellular CE463_19200 PF17862 AAA+ lid domain CE463_19205 PF01728 FtsJ-like methyltransferase CE463_19210 PF01985 CRS1 / YhbY (CRM) domain CE463_19220 PF03449 Transcription elongation factor, N-terminal CE463_19220 PF01272 Transcription elongation factor, GreA/GreB, C-term CE463_19235 PF00691 OmpA family CE463_19235 PF13677 Membrane MotB of proton-channel complex MotA/MotB CE463_19240 PF01618 MotA/TolQ/ExbB proton channel family CE463_19245 PF02609 Exonuclease VII small subunit CE463_19250 PF00348 Polyprenyl synthetase CE463_19255 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CE463_19255 PF02780 Transketolase, C-terminal domain CE463_19255 PF02779 Transketolase, pyrimidine binding domain CE463_19260 PF12911 N-terminal TM domain of oligopeptide transport permease C CE463_19260 PF00528 Binding-protein-dependent transport system inner membrane component CE463_19270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CE463_19275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CE463_19275 PF00005 ABC transporter CE463_19280 PF04608 Phosphatidylglycerophosphatase A CE463_19285 PF02769 AIR synthase related protein, C-terminal domain CE463_19285 PF00586 AIR synthase related protein, N-terminal domain CE463_19290 PF01029 NusB family CE463_19295 PF00885 6,7-dimethyl-8-ribityllumazine synthase CE463_19300 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CE463_19300 PF00925 GTP cyclohydrolase II CE463_19305 PF00677 Lumazine binding domain CE463_19310 PF01872 RibD C-terminal domain CE463_19310 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CE463_19315 PF03477 ATP cone domain CE463_19330 PF00464 Serine hydroxymethyltransferase CE463_19350 PF02613 Nitrate reductase delta subunit CE463_19370 PF03707 Bacterial signalling protein N terminal repeat CE463_19370 PF00990 Diguanylate cyclase, GGDEF domain CE463_19370 PF00563 EAL domain CE463_19380 PF16177 Acetyl-coenzyme A synthetase N-terminus CE463_19380 PF00501 AMP-binding enzyme CE463_19380 PF13193 AMP-binding enzyme C-terminal domain CE463_19385 PF01220 Dehydroquinase class II CE463_19390 PF00364 Biotin-requiring enzyme CE463_19395 PF00289 Biotin carboxylase, N-terminal domain CE463_19395 PF02785 Biotin carboxylase C-terminal domain CE463_19395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CE463_19400 PF06196 Protein of unknown function (DUF997) CE463_19405 PF00474 Sodium:solute symporter family CE463_19410 PF02378 Phosphotransferase system, EIIC CE463_19410 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CE463_19410 PF00367 phosphotransferase system, EIIB CE463_19415 PF03466 LysR substrate binding domain CE463_19415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_19420 PF08240 Alcohol dehydrogenase GroES-like domain CE463_19420 PF00107 Zinc-binding dehydrogenase CE463_19430 PF13520 Amino acid permease CE463_19435 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CE463_19440 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CE463_19445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CE463_19445 PF01842 ACT domain CE463_19445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CE463_19460 PF00881 Nitroreductase family CE463_19465 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE463_19465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CE463_19470 PF01343 Peptidase family S49 CE463_19485 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CE463_19485 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CE463_19490 PF07023 Protein of unknown function (DUF1315) CE463_19495 PF00710 Asparaginase, N-terminal CE463_19495 PF17763 Glutaminase/Asparaginase C-terminal domain CE463_19500 PF03616 Sodium/glutamate symporter CE463_19505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_19505 PF00672 HAMP domain CE463_19505 PF02743 Cache domain CE463_19515 PF01336 OB-fold nucleic acid binding domain CE463_19515 PF00152 tRNA synthetases class II (D, K and N) CE463_19520 PF02567 Phenazine biosynthesis-like protein CE463_19525 PF00175 Oxidoreductase NAD-binding domain CE463_19525 PF00258 Flavodoxin CE463_19525 PF00667 FAD binding domain CE463_19530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CE463_19530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CE463_19535 PF01507 Phosphoadenosine phosphosulfate reductase family CE463_19540 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CE463_19545 PF00528 Binding-protein-dependent transport system inner membrane component CE463_19550 PF00571 CBS domain CE463_19550 PF00005 ABC transporter CE463_19555 PF00186 Dihydrofolate reductase CE463_19560 PF12821 Threonine/Serine exporter, ThrE CE463_19565 PF06738 Putative threonine/serine exporter CE463_19575 PF13592 Winged helix-turn helix CE463_19575 PF13358 DDE superfamily endonuclease CE463_19580 PF00994 Probable molybdopterin binding domain CE463_19590 PF00109 Beta-ketoacyl synthase, N-terminal domain CE463_19590 PF02801 Beta-ketoacyl synthase, C-terminal domain CE463_19605 PF00109 Beta-ketoacyl synthase, N-terminal domain CE463_19605 PF02801 Beta-ketoacyl synthase, C-terminal domain CE463_19630 PF00221 Aromatic amino acid lyase CE463_19640 PF07977 FabA-like domain CE463_19645 PF00501 AMP-binding enzyme CE463_19645 PF13193 AMP-binding enzyme C-terminal domain CE463_19655 PF00550 Phosphopantetheine attachment site CE463_19660 PF00550 Phosphopantetheine attachment site CE463_19705 PF00034 Cytochrome c CE463_19705 PF03150 Di-haem cytochrome c peroxidase CE463_19710 PF01609 Transposase DDE domain CE463_19710 PF13808 DDE_Tnp_1-associated CE463_19715 PF00194 Eukaryotic-type carbonic anhydrase CE463_19720 PF04227 Indigoidine synthase A like protein CE463_19725 PF00294 pfkB family carbohydrate kinase CE463_19745 PF00582 Universal stress protein family CE463_19755 PF00171 Aldehyde dehydrogenase family CE463_19760 PF01472 PUA domain CE463_19760 PF00696 Amino acid kinase family CE463_19765 PF07417 Sigma factor-binding transcriptional regulator Crl CE463_19775 PF00156 Phosphoribosyl transferase domain CE463_19790 PF01546 Peptidase family M20/M25/M40 CE463_19790 PF07687 Peptidase dimerisation domain CE463_19800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CE463_19800 PF00005 ABC transporter CE463_19805 PF00005 ABC transporter CE463_19805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CE463_19810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CE463_19815 PF12911 N-terminal TM domain of oligopeptide transport permease C CE463_19815 PF00528 Binding-protein-dependent transport system inner membrane component CE463_19835 PF01609 Transposase DDE domain CE463_19835 PF13808 DDE_Tnp_1-associated CE463_19840 PF07715 TonB-dependent Receptor Plug Domain CE463_19840 PF00593 TonB dependent receptor CE463_19850 PF01618 MotA/TolQ/ExbB proton channel family CE463_19855 PF01618 MotA/TolQ/ExbB proton channel family CE463_19860 PF02472 Biopolymer transport protein ExbD/TolR CE463_19875 PF06483 Chitinase C CE463_19875 PF00704 Glycosyl hydrolases family 18 CE463_19915 PF00749 tRNA synthetases class I (E and Q), catalytic domain CE463_19930 PF00313 'Cold-shock' DNA-binding domain CE463_19970 PF00929 Exonuclease CE463_19975 PF03193 RsgA GTPase CE463_19980 PF02666 Phosphatidylserine decarboxylase CE463_19985 PF09905 DNA-binding protein VF530 CE463_20005 PF00990 Diguanylate cyclase, GGDEF domain CE463_20005 PF03707 Bacterial signalling protein N terminal repeat CE463_20005 PF00563 EAL domain CE463_20010 PF06877 Regulator of ribonuclease activity B CE463_20015 PF05547 Immune inhibitor A peptidase M6 CE463_20015 PF00801 PKD domain CE463_20040 PF05199 GMC oxidoreductase CE463_20040 PF00732 GMC oxidoreductase CE463_20045 PF00171 Aldehyde dehydrogenase family CE463_20055 PF00561 alpha/beta hydrolase fold CE463_20060 PF00664 ABC transporter transmembrane region CE463_20060 PF00005 ABC transporter CE463_20065 PF06004 Bacterial protein of unknown function (DUF903) CE463_20070 PF00581 Rhodanese-like domain CE463_20075 PF04960 Glutaminase CE463_20080 PF04320 Protein with unknown function (DUF469) CE463_20085 PF02390 Putative methyltransferase CE463_20090 PF01483 Proprotein convertase P-domain CE463_20090 PF04389 Peptidase family M28 CE463_20095 PF00155 Aminotransferase class I and II CE463_20100 PF00563 EAL domain CE463_20100 PF12792 CSS motif domain associated with EAL CE463_20105 PF01370 NAD dependent epimerase/dehydratase family CE463_20105 PF08338 Domain of unknown function (DUF1731) CE463_20115 PF00005 ABC transporter CE463_20120 PF13472 GDSL-like Lipase/Acylhydrolase family CE463_20125 PF00072 Response regulator receiver domain CE463_20125 PF01584 CheW-like domain CE463_20135 PF06826 Predicted Permease Membrane Region CE463_20135 PF02080 TrkA-C domain CE463_20140 PF03006 Haemolysin-III related CE463_20145 PF00282 Pyridoxal-dependent decarboxylase conserved domain CE463_20150 PF04279 Intracellular septation protein A CE463_20155 PF03795 YCII-related domain CE463_20160 PF00459 Inositol monophosphatase family CE463_20170 PF00483 Nucleotidyl transferase CE463_20175 PF00854 POT family CE463_20180 PF00072 Response regulator receiver domain CE463_20210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CE463_20215 PF02321 Outer membrane efflux protein CE463_20220 PF01207 Dihydrouridine synthase (Dus) CE463_20225 PF02954 Bacterial regulatory protein, Fis family CE463_20230 PF01810 LysE type translocator CE463_20270 PF00445 Ribonuclease T2 family CE463_20290 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase CE463_20305 PF03466 LysR substrate binding domain CE463_20305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_20310 PF00271 Helicase conserved C-terminal domain CE463_20310 PF00270 DEAD/DEAH box helicase CE463_20320 PF00753 Metallo-beta-lactamase superfamily CE463_20340 PF00102 Protein-tyrosine phosphatase CE463_20340 PF09013 YopH, N-terminal CE463_20385 PF08774 VRR-NUC domain CE463_20385 PF04851 Type III restriction enzyme, res subunit CE463_20400 PF01555 DNA methylase CE463_20400 PF18273 Type III R-M EcoP15I C-terminal domain CE463_20410 PF02796 Helix-turn-helix domain of resolvase CE463_20410 PF00239 Resolvase, N terminal domain CE463_20430 PF01848 Hok/gef family CE463_20450 PF00589 Phage integrase family CE463_20450 PF13356 Arm DNA-binding domain CE463_20465 PF03739 Lipopolysaccharide export system permease LptF/LptG CE463_20470 PF03739 Lipopolysaccharide export system permease LptF/LptG CE463_20475 PF02789 Cytosol aminopeptidase family, N-terminal domain CE463_20475 PF00883 Cytosol aminopeptidase family, catalytic domain CE463_20480 PF04364 DNA polymerase III chi subunit, HolC CE463_20485 PF10458 Valyl tRNA synthetase tRNA binding arm CE463_20485 PF00133 tRNA synthetases class I (I, L, M and V) CE463_20485 PF08264 Anticodon-binding domain of tRNA CE463_20495 PF09335 SNARE associated Golgi protein CE463_20500 PF00768 D-alanyl-D-alanine carboxypeptidase CE463_20525 PF02599 Global regulator protein family CE463_20530 PF01842 ACT domain CE463_20530 PF00696 Amino acid kinase family CE463_20530 PF13840 ACT domain CE463_20535 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CE463_20535 PF02272 DHHA1 domain CE463_20535 PF01411 tRNA synthetases class II (A) CE463_20540 PF02631 RecX family CE463_20545 PF00154 recA bacterial DNA recombination protein CE463_20550 PF02464 Competence-damaged protein CE463_20555 PF04073 Aminoacyl-tRNA editing domain CE463_20575 PF00392 Bacterial regulatory proteins, gntR family CE463_20575 PF00155 Aminotransferase class I and II CE463_20595 PF04172 LrgB-like family CE463_20610 PF00742 Homoserine dehydrogenase CE463_20610 PF03447 Homoserine dehydrogenase, NAD binding domain CE463_20610 PF00696 Amino acid kinase family CE463_20615 PF01053 Cys/Met metabolism PLP-dependent enzyme CE463_20620 PF01340 Met Apo-repressor, MetJ CE463_20625 PF12833 Helix-turn-helix domain CE463_20625 PF02311 AraC-like ligand binding domain CE463_20630 PF01588 Putative tRNA binding domain CE463_20635 PF03222 Tryptophan/tyrosine permease family CE463_20640 PF00459 Inositol monophosphatase family CE463_20645 PF00293 NUDIX domain CE463_20650 PF13419 Haloacid dehalogenase-like hydrolase CE463_20655 PF00579 tRNA synthetases class I (W and Y) CE463_20655 PF01479 S4 domain CE463_20660 PF00196 Bacterial regulatory proteins, luxR family CE463_20665 PF01203 Type II secretion system (T2SS), protein N CE463_20670 PF04612 Type II secretion system (T2SS), protein M CE463_20675 PF12693 GspL periplasmic domain CE463_20675 PF05134 Type II secretion system (T2SS), protein L CE463_20680 PF03934 Type II secretion system (T2SS), protein K CE463_20685 PF11612 Type II secretion system (T2SS), protein J CE463_20685 PF07963 Prokaryotic N-terminal methylation motif CE463_20690 PF07963 Prokaryotic N-terminal methylation motif CE463_20690 PF02501 Type II secretion system (T2SS), protein I CE463_20695 PF07963 Prokaryotic N-terminal methylation motif CE463_20695 PF12019 Type II transport protein GspH CE463_20700 PF07963 Prokaryotic N-terminal methylation motif CE463_20700 PF08334 Type II secretion system (T2SS), protein G CE463_20705 PF00482 Type II secretion system (T2SS), protein F CE463_20710 PF00437 Type II/IV secretion system protein CE463_20715 PF00263 Bacterial type II and III secretion system protein CE463_20715 PF03958 Bacterial type II/III secretion system short domain CE463_20720 PF11356 Type II secretion system protein C CE463_20725 PF01479 S4 domain CE463_20730 PF01430 Hsp33 protein CE463_20735 PF01293 Phosphoenolpyruvate carboxykinase CE463_20740 PF00392 Bacterial regulatory proteins, gntR family CE463_20745 PF00557 Metallopeptidase family M24 CE463_20745 PF01321 Creatinase/Prolidase N-terminal domain CE463_20750 PF11756 Nitrous oxide-stimulated promoter CE463_20755 PF00583 Acetyltransferase (GNAT) family CE463_20760 PF05433 Glycine zipper 2TM domain CE463_20765 PF02872 5'-nucleotidase, C-terminal domain CE463_20765 PF00149 Calcineurin-like phosphoesterase CE463_20770 PF01810 LysE type translocator CE463_20775 PF03472 Autoinducer binding domain CE463_20775 PF00196 Bacterial regulatory proteins, luxR family CE463_20780 PF00765 Autoinducer synthase CE463_20785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_20785 PF03466 LysR substrate binding domain CE463_20790 PF17876 Cold shock domain CE463_20790 PF00773 RNB domain CE463_20790 PF08206 Ribonuclease B OB domain CE463_20805 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CE463_20805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CE463_20805 PF02378 Phosphotransferase system, EIIC CE463_20810 PF01232 Mannitol dehydrogenase Rossmann domain CE463_20810 PF08125 Mannitol dehydrogenase C-terminal domain CE463_20815 PF05068 Mannitol repressor CE463_20820 PF02080 TrkA-C domain CE463_20820 PF00999 Sodium/hydrogen exchanger family CE463_20820 PF03471 Transporter associated domain CE463_20825 PF00684 DnaJ central domain CE463_20825 PF01556 DnaJ C terminal domain CE463_20825 PF00226 DnaJ domain CE463_20840 PF01544 CorA-like Mg2+ transporter protein CE463_20845 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CE463_20860 PF04307 LexA-binding, inner membrane-associated putative hydrolase CE463_20865 PF07662 Na+ dependent nucleoside transporter C-terminus CE463_20865 PF01773 Na+ dependent nucleoside transporter N-terminus CE463_20865 PF07670 Nucleoside recognition CE463_20875 PF00271 Helicase conserved C-terminal domain CE463_20875 PF00270 DEAD/DEAH box helicase CE463_20875 PF03880 DbpA RNA binding domain CE463_20900 PF01040 UbiA prenyltransferase family CE463_20905 PF00425 chorismate binding enzyme CE463_20910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CE463_20910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CE463_20910 PF16582 Middle domain of thiamine pyrophosphate CE463_20915 PF12697 Alpha/beta hydrolase family CE463_20920 PF00378 Enoyl-CoA hydratase/isomerase CE463_20925 PF13378 Enolase C-terminal domain-like CE463_20930 PF00501 AMP-binding enzyme CE463_20940 PF13808 DDE_Tnp_1-associated CE463_20940 PF01609 Transposase DDE domain CE463_20950 PF00419 Fimbrial protein CE463_21005 PF13808 DDE_Tnp_1-associated CE463_21005 PF01609 Transposase DDE domain CE463_21025 PF02698 DUF218 domain CE463_21030 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CE463_21030 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CE463_21040 PF00561 alpha/beta hydrolase fold CE463_21045 PF03280 Proteobacterial lipase chaperone protein CE463_21060 PF00141 Peroxidase CE463_21075 PF01053 Cys/Met metabolism PLP-dependent enzyme CE463_21100 PF03577 Peptidase family C69 CE463_21105 PF00106 short chain dehydrogenase CE463_21125 PF02308 MgtC family CE463_21130 PF00128 Alpha amylase, catalytic domain CE463_21130 PF02903 Alpha amylase, N-terminal ig-like domain CE463_21130 PF16657 Maltogenic Amylase, C-terminal domain CE463_21145 PF00884 Sulfatase CE463_21150 PF01037 Lrp/AsnC ligand binding domain CE463_21160 PF04204 Homoserine O-succinyltransferase CE463_21165 PF12072 Domain of unknown function (DUF3552) CE463_21165 PF00013 KH domain CE463_21165 PF01966 HD domain CE463_21170 PF00994 Probable molybdopterin binding domain CE463_21170 PF02464 Competence-damaged protein CE463_21180 PF00005 ABC transporter CE463_21210 PF07722 Peptidase C26 CE463_21220 PF00924 Mechanosensitive ion channel CE463_21230 PF13419 Haloacid dehalogenase-like hydrolase CE463_21235 PF02899 Phage integrase, N-terminal SAM-like domain CE463_21235 PF00589 Phage integrase family CE463_21245 PF01678 Diaminopimelate epimerase CE463_21250 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CE463_21250 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CE463_21255 PF01491 Frataxin-like domain CE463_21260 PF02230 Phospholipase/Carboxylesterase CE463_21265 PF01295 Adenylate cyclase, class-I CE463_21265 PF12633 Adenylate cyclase NT domain CE463_21270 PF03900 Porphobilinogen deaminase, C-terminal domain CE463_21270 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CE463_21275 PF02602 Uroporphyrinogen-III synthase HemD CE463_21280 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CE463_21295 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CE463_21310 PF07715 TonB-dependent Receptor Plug Domain CE463_21310 PF00593 TonB dependent receptor CE463_21335 PF08803 Putative mono-oxygenase ydhR CE463_21345 PF06055 Exopolysaccharide synthesis, ExoD CE463_21355 PF13808 DDE_Tnp_1-associated CE463_21355 PF01609 Transposase DDE domain CE463_21385 PF04055 Radical SAM superfamily CE463_21385 PF06968 Biotin and Thiamin Synthesis associated domain CE463_21390 PF05690 Thiazole biosynthesis protein ThiG CE463_21400 PF00899 ThiF family CE463_21405 PF02581 Thiamine monophosphate synthase CE463_21410 PF01964 Radical SAM ThiC family CE463_21410 PF13667 ThiC-associated domain CE463_21455 PF00102 Protein-tyrosine phosphatase CE463_21455 PF09013 YopH, N-terminal CE463_21475 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CE463_21510 PF00872 Transposase, Mutator family CE463_21520 PF01425 Amidase CE463_21525 PF04371 Porphyromonas-type peptidyl-arginine deiminase CE463_21530 PF03466 LysR substrate binding domain CE463_21530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_21535 PF00106 short chain dehydrogenase CE463_21550 PF00378 Enoyl-CoA hydratase/isomerase CE463_21555 PF10952 Protein of unknown function (DUF2753) CE463_21560 PF00132 Bacterial transferase hexapeptide (six repeats) CE463_21570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CE463_21585 PF02594 Uncharacterised ACR, YggU family COG1872 CE463_21590 PF02325 YGGT family CE463_21595 PF03807 NADP oxidoreductase coenzyme F420-dependent CE463_21595 PF14748 Pyrroline-5-carboxylate reductase dimerisation CE463_21600 PF01168 Alanine racemase, N-terminal domain CE463_21605 PF00437 Type II/IV secretion system protein CE463_21610 PF00437 Type II/IV secretion system protein CE463_21615 PF03883 Peroxide stress protein YaaA CE463_21620 PF00271 Helicase conserved C-terminal domain CE463_21620 PF00270 DEAD/DEAH box helicase CE463_21625 PF05175 Methyltransferase small domain CE463_21630 PF05525 Branched-chain amino acid transport protein CE463_21645 PF01475 Ferric uptake regulator family CE463_21650 PF01207 Dihydrouridine synthase (Dus) CE463_21665 PF00216 Bacterial DNA-binding protein CE463_21670 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CE463_21675 PF07238 PilZ domain CE463_21680 PF18073 Rubredoxin metal binding domain CE463_21695 PF18429 Domain of unknown function (DUF5609) CE463_21705 PF01048 Phosphorylase superfamily CE463_21710 PF01676 Metalloenzyme superfamily CE463_21715 PF00591 Glycosyl transferase family, a/b domain CE463_21715 PF02885 Glycosyl transferase family, helical bundle domain CE463_21715 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CE463_21720 PF01791 DeoC/LacD family aldolase CE463_21735 PF01026 TatD related DNase CE463_21750 PF00583 Acetyltransferase (GNAT) family CE463_21755 PF01938 TRAM domain CE463_21755 PF05958 tRNA (Uracil-5-)-methyltransferase CE463_21760 PF00909 Ammonium Transporter Family CE463_21795 PF00486 Transcriptional regulatory protein, C terminal CE463_21795 PF00072 Response regulator receiver domain CE463_21805 PF08443 RimK-like ATP-grasp domain CE463_21805 PF18030 RimK PreATP-grasp domain CE463_21820 PF00999 Sodium/hydrogen exchanger family CE463_21835 PF08668 HDOD domain CE463_21845 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CE463_21850 PF13426 PAS domain CE463_21850 PF08447 PAS fold CE463_21850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_21855 PF01740 STAS domain CE463_21855 PF08678 Rsbr N terminal CE463_21860 PF13581 Histidine kinase-like ATPase domain CE463_21865 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CE463_21865 PF00072 Response regulator receiver domain CE463_21865 PF01627 Hpt domain CE463_21865 PF00512 His Kinase A (phospho-acceptor) domain CE463_21865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_21865 PF00672 HAMP domain CE463_21870 PF00072 Response regulator receiver domain CE463_21880 PF07690 Major Facilitator Superfamily CE463_21885 PF01914 MarC family integral membrane protein CE463_21895 PF01523 Putative modulator of DNA gyrase CE463_21900 PF00795 Carbon-nitrogen hydrolase CE463_21910 PF13116 Protein of unknown function CE463_21910 PF13502 AsmA-like C-terminal region CE463_21915 PF10150 Ribonuclease E/G family CE463_21915 PF00575 S1 RNA binding domain CE463_21920 PF02545 Maf-like protein CE463_21925 PF04093 rod shape-determining protein MreD CE463_21930 PF04085 rod shape-determining protein MreC CE463_21965 PF03958 Bacterial type II/III secretion system short domain CE463_21965 PF00263 Bacterial type II and III secretion system protein CE463_21995 PF00563 EAL domain CE463_21995 PF17157 Gammaproteobacterial periplasmic sensor domain CE463_21995 PF00990 Diguanylate cyclase, GGDEF domain CE463_22005 PF01699 Sodium/calcium exchanger protein CE463_22010 PF00221 Aromatic amino acid lyase CE463_22015 PF01175 Urocanase Rossmann-like domain CE463_22015 PF17391 Urocanase N-terminal domain CE463_22015 PF17392 Urocanase C-terminal domain CE463_22020 PF00491 Arginase family CE463_22025 PF01979 Amidohydrolase family CE463_22030 PF07702 UTRA domain CE463_22030 PF00392 Bacterial regulatory proteins, gntR family CE463_22035 PF00484 Carbonic anhydrase CE463_22040 PF00140 Sigma-70 factor, region 1.2 CE463_22040 PF04542 Sigma-70 region 2 CE463_22040 PF04545 Sigma-70, region 4 CE463_22045 PF18075 FtsX extracellular domain CE463_22050 PF00005 ABC transporter CE463_22055 PF00448 SRP54-type protein, GTPase domain CE463_22055 PF02881 SRP54-type protein, helical bundle domain CE463_22075 PF00440 Bacterial regulatory proteins, tetR family CE463_22085 PF13091 PLD-like domain CE463_22090 PF01464 Transglycosylase SLT domain CE463_22090 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE463_22100 PF02416 mttA/Hcf106 family CE463_22105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_22105 PF03466 LysR substrate binding domain CE463_22110 PF01914 MarC family integral membrane protein CE463_22115 PF10678 Protein of unknown function (DUF2492) CE463_22120 PF00375 Sodium:dicarboxylate symporter family CE463_22130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CE463_22130 PF03466 LysR substrate binding domain CE463_22135 PF13533 Biotin-lipoyl like CE463_22140 PF07690 Major Facilitator Superfamily CE463_22145 PF07947 YhhN family CE463_22165 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CE463_22165 PF00326 Prolyl oligopeptidase family CE463_22180 PF02525 Flavodoxin-like fold CE463_22185 PF00999 Sodium/hydrogen exchanger family CE463_22185 PF02254 TrkA-N domain CE463_22215 PF01312 FlhB HrpN YscU SpaS Family CE463_22220 PF01311 Bacterial export proteins, family 1 CE463_22225 PF01313 Bacterial export proteins, family 3 CE463_22230 PF00813 FliP family CE463_22235 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CE463_22250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CE463_22255 PF04348 LppC putative lipoprotein CE463_22260 PF02021 Uncharacterised protein family UPF0102 CE463_22265 PF13580 SIS domain CE463_22270 PF04972 BON domain CE463_22275 PF04386 Stringent starvation protein B CE463_22280 PF02798 Glutathione S-transferase, N-terminal domain CE463_22280 PF00043 Glutathione S-transferase, C-terminal domain CE463_22285 PF02167 Cytochrome C1 family CE463_22290 PF00033 Cytochrome b/b6/petB CE463_22290 PF00032 Cytochrome b(C-terminal)/b6/petD CE463_22295 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CE463_22295 PF00355 Rieske [2Fe-2S] domain CE463_22300 PF00380 Ribosomal protein S9/S16 CE463_22305 PF00572 Ribosomal protein L13 CE463_22310 PF03969 AFG1-like ATPase CE463_22320 PF00595 PDZ domain CE463_22320 PF13180 PDZ domain CE463_22325 PF13180 PDZ domain CE463_22360 PF01979 Amidohydrolase family CE463_22365 PF03841 L-seryl-tRNA selenium transferase CE463_22370 PF07071 KDGP aldolase CE463_22375 PF02378 Phosphotransferase system, EIIC CE463_22375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CE463_22375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CE463_22380 PF00381 PTS HPr component phosphorylation site CE463_22385 PF03668 P-loop ATPase protein family CE463_22390 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CE463_22395 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CE463_22400 PF04552 Sigma-54, DNA binding domain CE463_22400 PF04963 Sigma-54 factor, core binding domain CE463_22400 PF00309 Sigma-54 factor, Activator interacting domain (AID) CE463_22405 PF00005 ABC transporter CE463_22405 PF12399 Branched-chain amino acid ATP-binding cassette transporter CE463_22410 PF03968 OstA-like protein CE463_22415 PF06835 Lipopolysaccharide-assembly, LptC-related CE463_22425 PF01380 SIS domain CE463_22425 PF00571 CBS domain CE463_22430 PF00005 ABC transporter CE463_22435 PF02405 Permease MlaE CE463_22440 PF02470 MlaD protein CE463_22445 PF05494 MlaC protein CE463_22455 PF01722 BolA-like protein CE463_22460 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CE463_22465 PF01523 Putative modulator of DNA gyrase CE463_22470 PF04751 Protein of unknown function (DUF615) CE463_22480 PF04363 Protein of unknown function (DUF496) CE463_22520 PF01196 Ribosomal protein L17 CE463_22525 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CE463_22525 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CE463_22525 PF01000 RNA polymerase Rpb3/RpoA insert domain CE463_22530 PF00163 Ribosomal protein S4/S9 N-terminal domain CE463_22530 PF01479 S4 domain CE463_22535 PF00411 Ribosomal protein S11 CE463_22540 PF00416 Ribosomal protein S13/S18 CE463_22545 PF00444 Ribosomal protein L36 CE463_22550 PF00344 SecY translocase CE463_22555 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CE463_22560 PF00327 Ribosomal protein L30p/L7e CE463_22565 PF00333 Ribosomal protein S5, N-terminal domain CE463_22565 PF03719 Ribosomal protein S5, C-terminal domain CE463_22570 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CE463_22575 PF00347 Ribosomal protein L6 CE463_22580 PF00410 Ribosomal protein S8 CE463_22585 PF00253 Ribosomal protein S14p/S29e CE463_22590 PF00281 Ribosomal protein L5 CE463_22590 PF00673 ribosomal L5P family C-terminus CE463_22595 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CE463_22600 PF00238 Ribosomal protein L14p/L23e CE463_22605 PF00366 Ribosomal protein S17 CE463_22610 PF00831 Ribosomal L29 protein CE463_22615 PF00252 Ribosomal protein L16p/L10e CE463_22620 PF07650 KH domain CE463_22620 PF00189 Ribosomal protein S3, C-terminal domain CE463_22625 PF00237 Ribosomal protein L22p/L17e CE463_22630 PF00203 Ribosomal protein S19 CE463_22635 PF03947 Ribosomal Proteins L2, C-terminal domain CE463_22635 PF00181 Ribosomal Proteins L2, RNA binding domain CE463_22640 PF00276 Ribosomal protein L23 CE463_22645 PF00573 Ribosomal protein L4/L1 family CE463_22650 PF00297 Ribosomal protein L3 CE463_22655 PF00338 Ribosomal protein S10p/S20e CE463_22665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_22665 PF00672 HAMP domain CE463_22665 PF00512 His Kinase A (phospho-acceptor) domain CE463_22670 PF00072 Response regulator receiver domain CE463_22670 PF00486 Transcriptional regulatory protein, C terminal CE463_22675 PF03449 Transcription elongation factor, N-terminal CE463_22675 PF01272 Transcription elongation factor, GreA/GreB, C-term CE463_22680 PF09371 Tex-like protein N-terminal domain CE463_22680 PF16921 Tex protein YqgF-like domain CE463_22680 PF00575 S1 RNA binding domain CE463_22680 PF17674 HHH domain CE463_22700 PF00561 alpha/beta hydrolase fold CE463_22705 PF00156 Phosphoribosyl transferase domain CE463_22710 PF01106 NifU-like domain CE463_22710 PF01521 Iron-sulphur cluster biosynthesis CE463_22715 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CE463_22715 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CE463_22720 PF02556 Preprotein translocase subunit SecB CE463_22725 PF00581 Rhodanese-like domain CE463_22730 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CE463_22730 PF01676 Metalloenzyme superfamily CE463_22735 PF01551 Peptidase family M23 CE463_22745 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CE463_22745 PF00356 Bacterial regulatory proteins, lacI family CE463_22750 PF01081 KDPG and KHG aldolase CE463_22755 PF00920 Dehydratase family CE463_22760 PF01202 Shikimate kinase CE463_22765 PF02447 GntP family permease CE463_22770 PF13091 PLD-like domain CE463_22775 PF00271 Helicase conserved C-terminal domain CE463_22775 PF00270 DEAD/DEAH box helicase CE463_22775 PF17191 RecG wedge domain CE463_22785 PF09500 Putative thioesterase (yiiD_Cterm) CE463_22785 PF00583 Acetyltransferase (GNAT) family CE463_22795 PF02580 D-Tyr-tRNA(Tyr) deacylase CE463_22800 PF03631 Virulence factor BrkB CE463_22810 PF00120 Glutamine synthetase, catalytic domain CE463_22810 PF03951 Glutamine synthetase, beta-Grasp domain CE463_22820 PF00989 PAS fold CE463_22820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_22820 PF00512 His Kinase A (phospho-acceptor) domain CE463_22825 PF00072 Response regulator receiver domain CE463_22825 PF02954 Bacterial regulatory protein, Fis family CE463_22825 PF00158 Sigma-54 interaction domain CE463_22830 PF00962 Adenosine/AMP deaminase CE463_22835 PF06969 HemN C-terminal domain CE463_22835 PF04055 Radical SAM superfamily CE463_22840 PF10675 Protein of unknown function (DUF2489) CE463_22845 PF04220 Der GTPase activator (YihI) CE463_22850 PF00034 Cytochrome c CE463_22855 PF01926 50S ribosome-binding GTPase CE463_22860 PF07369 Protein of unknown function (DUF1488) CE463_22865 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CE463_22865 PF08501 Shikimate dehydrogenase substrate binding domain CE463_22865 PF01488 Shikimate / quinate 5-dehydrogenase CE463_22870 PF01218 Coproporphyrinogen III oxidase CE463_22875 PF01300 Telomere recombination CE463_22880 PF00731 AIR carboxylase CE463_22885 PF01396 Topoisomerase DNA binding C4 zinc finger CE463_22890 PF04361 Protein of unknown function (DUF494) CE463_22895 PF17782 DprA winged helix domain CE463_22895 PF02481 DNA recombination-mediator protein A CE463_22900 PF01476 LysM domain CE463_22905 PF01327 Polypeptide deformylase CE463_22910 PF02911 Formyl transferase, C-terminal domain CE463_22910 PF00551 Formyl transferase CE463_22915 PF01189 16S rRNA methyltransferase RsmB/F CE463_22915 PF01029 NusB family CE463_22920 PF02080 TrkA-C domain CE463_22920 PF02254 TrkA-N domain CE463_22925 PF02386 Cation transport protein CE463_22930 PF02646 RmuC family CE463_22945 PF02082 Transcriptional regulator CE463_22950 PF00294 pfkB family carbohydrate kinase CE463_22955 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CE463_22955 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CE463_22960 PF02540 NAD synthase CE463_22960 PF00117 Glutamine amidotransferase class-I CE463_22960 PF00958 GMP synthase C terminal domain CE463_22965 PF00171 Aldehyde dehydrogenase family CE463_22970 PF00202 Aminotransferase class-III CE463_22975 PF01381 Helix-turn-helix CE463_22980 PF00171 Aldehyde dehydrogenase family CE463_22990 PF00892 EamA-like transporter family CE463_22995 PF12833 Helix-turn-helix domain CE463_23000 PF01810 LysE type translocator CE463_23005 PF00689 Cation transporting ATPase, C-terminus CE463_23005 PF00690 Cation transporter/ATPase, N-terminus CE463_23020 PF13806 Rieske-like [2Fe-2S] domain CE463_23025 PF01226 Formate/nitrite transporter CE463_23030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CE463_23030 PF14824 Sirohaem biosynthesis protein central CE463_23030 PF10414 Sirohaem synthase dimerisation region CE463_23035 PF00571 CBS domain CE463_23035 PF01769 Divalent cation transporter CE463_23035 PF03448 MgtE intracellular N domain CE463_23040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CE463_23040 PF00672 HAMP domain CE463_23045 PF03737 Aldolase/RraA CE463_23050 PF02592 Putative vitamin uptake transporter CE463_23060 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CE463_23065 PF00034 Cytochrome c CE463_23070 PF00270 DEAD/DEAH box helicase CE463_23070 PF09382 RQC domain CE463_23070 PF16124 RecQ zinc-binding CE463_23070 PF00570 HRDC domain CE463_23070 PF00271 Helicase conserved C-terminal domain CE463_23075 PF03061 Thioesterase superfamily CE463_23095 PF03473 MOSC domain CE463_23095 PF03475 3-alpha domain CE463_23100 PF00528 Binding-protein-dependent transport system inner membrane component CE463_23105 PF00528 Binding-protein-dependent transport system inner membrane component CE463_23110 PF08402 TOBE domain CE463_23110 PF00005 ABC transporter CE463_23115 PF13416 Bacterial extracellular solute-binding protein CE463_23120 PF13416 Bacterial extracellular solute-binding protein CE463_23125 PF00202 Aminotransferase class-III CE463_23130 PF00120 Glutamine synthetase, catalytic domain CE463_23135 PF01258 Prokaryotic dksA/traR C4-type zinc finger CE463_23150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CE463_23150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CE463_23155 PF00012 Hsp70 protein CE463_23170 PF02903 Alpha amylase, N-terminal ig-like domain CE463_23170 PF00128 Alpha amylase, catalytic domain CE463_23175 PF02719 Polysaccharide biosynthesis protein CE463_23180 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CE463_23205 PF13193 AMP-binding enzyme C-terminal domain CE463_23205 PF00501 AMP-binding enzyme CE463_23225 PF02348 Cytidylyltransferase CE463_23235 PF03102 NeuB family CE463_23235 PF08666 SAF domain CE463_23260 PF13808 DDE_Tnp_1-associated CE463_23260 PF01609 Transposase DDE domain CE463_23270 PF16221 winged helix-turn-helix CE463_23270 PF16254 Domain of unknown function (DUF4910) CE463_23270 PF09940 Domain of unknown function (DUF2172) CE463_23305 PF05958 tRNA (Uracil-5-)-methyltransferase CE463_23310 PF00486 Transcriptional regulatory protein, C terminal CE463_23310 PF00072 Response regulator receiver domain CE463_23315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_23315 PF00512 His Kinase A (phospho-acceptor) domain CE463_23315 PF00672 HAMP domain CE463_23325 PF00390 Malic enzyme, N-terminal domain CE463_23325 PF03949 Malic enzyme, NAD binding domain CE463_23330 PF11066 Protein of unknown function (DUF2867) CE463_23330 PF13460 NAD(P)H-binding CE463_23335 PF01197 Ribosomal protein L31 CE463_23340 PF00271 Helicase conserved C-terminal domain CE463_23340 PF17764 3′ DNA-binding domain (3′BD) CE463_23340 PF18074 Primosomal protein N C-terminal domain CE463_23340 PF00270 DEAD/DEAH box helicase CE463_23340 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CE463_23350 PF00440 Bacterial regulatory proteins, tetR family CE463_23360 PF00691 OmpA family CE463_23360 PF01389 OmpA-like transmembrane domain CE463_23365 PF00585 C-terminal regulatory domain of Threonine dehydratase CE463_23365 PF00291 Pyridoxal-phosphate dependent enzyme CE463_23370 PF00920 Dehydratase family CE463_23375 PF01063 Amino-transferase class IV CE463_23385 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CE463_23385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CE463_23385 PF00205 Thiamine pyrophosphate enzyme, central domain CE463_23390 PF13335 Magnesium chelatase, subunit ChlI C-terminal CE463_23390 PF01078 Magnesium chelatase, subunit ChlI CE463_23400 PF04463 Protein of unknown function (DUF523) CE463_23410 PF00857 Isochorismatase family CE463_23415 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CE463_23415 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CE463_23425 PF00005 ABC transporter CE463_23430 PF00528 Binding-protein-dependent transport system inner membrane component CE463_23435 PF01323 DSBA-like thioredoxin domain CE463_23440 PF01636 Phosphotransferase enzyme family CE463_23445 PF13746 4Fe-4S dicluster domain CE463_23445 PF12801 4Fe-4S binding domain CE463_23445 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CE463_23450 PF06288 Protein of unknown function (DUF1040) CE463_23455 PF00563 EAL domain CE463_23455 PF01590 GAF domain CE463_23455 PF00990 Diguanylate cyclase, GGDEF domain CE463_23455 PF00360 Phytochrome region CE463_23460 PF13411 MerR HTH family regulatory protein CE463_23465 PF00403 Heavy-metal-associated domain CE463_23470 PF00156 Phosphoribosyl transferase domain CE463_23475 PF03725 3' exoribonuclease family, domain 2 CE463_23475 PF01138 3' exoribonuclease family, domain 1 CE463_23480 PF08340 Domain of unknown function (DUF1732) CE463_23480 PF03755 YicC-like family, N-terminal region CE463_23495 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) CE463_23515 PF01370 NAD dependent epimerase/dehydratase family CE463_23520 PF00440 Bacterial regulatory proteins, tetR family CE463_23520 PF08360 QacR-like protein, C-terminal region CE463_23525 PF00155 Aminotransferase class I and II CE463_23530 PF08240 Alcohol dehydrogenase GroES-like domain CE463_23530 PF00107 Zinc-binding dehydrogenase CE463_23545 PF13361 UvrD-like helicase C-terminal domain CE463_23545 PF00580 UvrD/REP helicase N-terminal domain CE463_23550 PF00266 Aminotransferase class-V CE463_23555 PF02657 Fe-S metabolism associated domain CE463_23560 PF00899 ThiF family CE463_23590 PF12724 Flavodoxin domain CE463_23595 PF02386 Cation transport protein CE463_23600 PF01205 Uncharacterized protein family UPF0029 CE463_23600 PF09186 Domain of unknown function (DUF1949) CE463_23610 PF13193 AMP-binding enzyme C-terminal domain CE463_23610 PF00501 AMP-binding enzyme CE463_23615 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CE463_23615 PF00378 Enoyl-CoA hydratase/isomerase CE463_23615 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CE463_23620 PF02803 Thiolase, C-terminal domain CE463_23620 PF00108 Thiolase, N-terminal domain CE463_23625 PF00072 Response regulator receiver domain CE463_23625 PF00486 Transcriptional regulatory protein, C terminal CE463_23630 PF00672 HAMP domain CE463_23630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CE463_23630 PF00512 His Kinase A (phospho-acceptor) domain CE463_23635 PF01547 Bacterial extracellular solute-binding protein CE463_23645 PF01206 Sulfurtransferase TusA CE463_23650 PF01042 Endoribonuclease L-PSP CE463_23655 PF00691 OmpA family CE463_23655 PF13488 Glycine zipper CE463_23665 PF02091 Glycyl-tRNA synthetase alpha subunit CE463_23670 PF05746 DALR anticodon binding domain CE463_23670 PF02092 Glycyl-tRNA synthetase beta subunit CE463_23675 PF11008 Protein of unknown function (DUF2846) CE463_23690 PF00392 Bacterial regulatory proteins, gntR family CE463_23690 PF07702 UTRA domain CE463_23695 PF00158 Sigma-54 interaction domain CE463_23695 PF01590 GAF domain CE463_23705 PF18113 Rubredoxin binding C-terminal domain CE463_23705 PF07992 Pyridine nucleotide-disulphide oxidoreductase CE463_23715 PF12801 4Fe-4S binding domain CE463_23720 PF03222 Tryptophan/tyrosine permease family CE463_23725 PF05932 Tir chaperone protein (CesT) family CE463_23735 PF00990 Diguanylate cyclase, GGDEF domain CE463_23735 PF00563 EAL domain CE463_23735 PF13426 PAS domain CE463_23750 PF00102 Protein-tyrosine phosphatase CE463_23750 PF09013 YopH, N-terminal CE463_23760 PF01609 Transposase DDE domain CE463_23765 PF00872 Transposase, Mutator family CE463_23790 PF02056 Family 4 glycosyl hydrolase CE463_23790 PF11975 Family 4 glycosyl hydrolase C-terminal domain CE463_23795 PF00356 Bacterial regulatory proteins, lacI family CE463_23800 PF13458 Periplasmic binding protein CE463_23805 PF02653 Branched-chain amino acid transport system / permease component CE463_23810 PF02653 Branched-chain amino acid transport system / permease component CE463_23810 PF11862 Domain of unknown function (DUF3382) CE463_23815 PF00005 ABC transporter CE463_23815 PF12399 Branched-chain amino acid ATP-binding cassette transporter CE463_23820 PF00005 ABC transporter CE463_23830 PF01810 LysE type translocator CE463_23835 PF00581 Rhodanese-like domain CE463_23840 PF01694 Rhomboid family CE463_23840 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CE463_23845 PF12262 Bacterial virulence factor lipase N-terminal CE463_23850 PF04380 Membrane fusogenic activity CE463_23855 PF00175 Oxidoreductase NAD-binding domain CE463_23860 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CE463_23870 PF07497 Rho termination factor, RNA-binding domain CE463_23870 PF07498 Rho termination factor, N-terminal domain CE463_23870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CE463_23875 PF00085 Thioredoxin CE463_23880 PF00271 Helicase conserved C-terminal domain CE463_23880 PF00270 DEAD/DEAH box helicase CE463_23885 PF02541 Ppx/GppA phosphatase family CE463_23895 PF04445 Putative SAM-dependent methyltransferase CE463_23900 PF00497 Bacterial extracellular solute-binding proteins, family 3 CE463_23905 PF00563 EAL domain CE463_23905 PF03707 Bacterial signalling protein N terminal repeat CE463_23905 PF00990 Diguanylate cyclase, GGDEF domain CE463_23910 PF01432 Peptidase family M3 CE463_23915 PF00490 Delta-aminolevulinic acid dehydratase CE463_23920 PF01026 TatD related DNase CE463_23925 PF00902 Sec-independent protein translocase protein (TatC) CE463_23930 PF02416 mttA/Hcf106 family CE463_23935 PF02416 mttA/Hcf106 family CE463_23940 PF03109 ABC1 family CE463_23945 PF02036 SCP-2 sterol transfer family CE463_23950 PF01209 ubiE/COQ5 methyltransferase family CE463_23955 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CE463_23960 PF07969 Amidohydrolase family CE463_24000 PF03544 Gram-negative bacterial TonB protein C-terminal CE463_24005 PF02472 Biopolymer transport protein ExbD/TolR CE463_24010 PF01618 MotA/TolQ/ExbB proton channel family CE463_24015 PF01618 MotA/TolQ/ExbB proton channel family CE463_24025 PF03472 Autoinducer binding domain CE463_24025 PF00196 Bacterial regulatory proteins, luxR family CE463_24030 PF01380 SIS domain CE463_24035 PF08220 DeoR-like helix-turn-helix domain CE463_24035 PF00455 DeoR C terminal sensor domain CE463_24040 PF00486 Transcriptional regulatory protein, C terminal CE463_24040 PF00072 Response regulator receiver domain CE463_24050 PF00905 Penicillin binding protein transpeptidase domain CE463_24055 PF06123 Inner membrane protein CreD CE463_24060 PF00132 Bacterial transferase hexapeptide (six repeats) CE463_24060 PF14602 Hexapeptide repeat of succinyl-transferase CE463_24060 PF12804 MobA-like NTP transferase domain CE463_24065 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CE463_24065 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CE463_24070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CE463_24070 PF02874 ATP synthase alpha/beta family, beta-barrel domain CE463_24075 PF00231 ATP synthase CE463_24080 PF02874 ATP synthase alpha/beta family, beta-barrel domain CE463_24080 PF00306 ATP synthase alpha/beta chain, C terminal domain CE463_24080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CE463_24085 PF00213 ATP synthase delta (OSCP) subunit CE463_24090 PF00430 ATP synthase B/B' CF(0) CE463_24095 PF00137 ATP synthase subunit C CE463_24100 PF00119 ATP synthase A chain CE463_24105 PF03899 ATP synthase I chain CE463_24110 PF02195 ParB-like nuclease domain CE463_24110 PF17762 HTH domain found in ParB protein CE463_24115 PF13614 AAA domain CE463_24120 PF02527 rRNA small subunit methyltransferase G CE463_24125 PF13932 GidA associated domain CE463_24125 PF01134 Glucose inhibited division protein A CE463_24130 PF00258 Flavodoxin CE463_24135 PF00593 TonB dependent receptor CE463_24135 PF07715 TonB-dependent Receptor Plug Domain CE463_24140 PF00005 ABC transporter CE463_24145 PF00005 ABC transporter CE463_24150 PF01497 Periplasmic binding protein CE463_24155 PF01032 FecCD transport family CE463_24160 PF07715 TonB-dependent Receptor Plug Domain CE463_24160 PF00593 TonB dependent receptor CE463_24165 PF01497 Periplasmic binding protein CE463_24170 PF00005 ABC transporter CE463_24175 PF01032 FecCD transport family CE463_24180 PF01032 FecCD transport family CE463_24185 PF00005 ABC transporter CE463_24190 PF04954 Siderophore-interacting protein CE463_24190 PF00664 ABC transporter transmembrane region CE463_24190 PF08021 Siderophore-interacting FAD-binding domain CE463_24190 PF00005 ABC transporter CE463_24200 PF00975 Thioesterase domain CE463_24200 PF00550 Phosphopantetheine attachment site CE463_24200 PF00668 Condensation domain CE463_24200 PF00501 AMP-binding enzyme CE463_24200 PF13193 AMP-binding enzyme C-terminal domain CE463_24205 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CE463_24210 PF00668 Condensation domain CE463_24210 PF00501 AMP-binding enzyme CE463_24210 PF00550 Phosphopantetheine attachment site CE463_24220 PF00282 Pyridoxal-dependent decarboxylase conserved domain CE463_24225 PF10396 GTP-binding protein TrmE N-terminus CE463_24225 PF01926 50S ribosome-binding GTPase CE463_24225 PF12631 MnmE helical domain CE463_24230 PF02096 60Kd inner membrane protein CE463_24230 PF14849 YidC periplasmic domain CE463_24235 PF01809 Putative membrane protein insertion efficiency factor CE463_24240 PF00825 Ribonuclease P CE463_24245 PF00468 Ribosomal protein L34 CE463_24255 PF00528 Binding-protein-dependent transport system inner membrane component CE463_24260 PF00497 Bacterial extracellular solute-binding proteins, family 3